BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022531
(295 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255563224|ref|XP_002522615.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538091|gb|EEF39702.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 426
Score = 479 bits (1232), Expect = e-133, Method: Compositional matrix adjust.
Identities = 221/292 (75%), Positives = 257/292 (88%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
MVT+KEF L D DYATRIDLMTKVFGI + ERYFEGLP++ KTSETYTALLH YAG K
Sbjct: 132 MVTNKEFELMDFDYATRIDLMTKVFGIDAAERYFEGLPITVKTSETYTALLHSYAGVKQL 191
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
KAEEL+ER+K SNLSF AL YNEMMTLYMSVGQVEKV+LVVEE+KR+ + PDIFTYNLW
Sbjct: 192 GKAEELYERIKGSNLSFTALTYNEMMTLYMSVGQVEKVSLVVEELKRQKIAPDIFTYNLW 251
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
ISSCAA LNIDQV + LDEM DSG +DDW++Y+++ NIY+ A HLVN ESS +VEAEKS
Sbjct: 252 ISSCAAILNIDQVTRILDEMKHDSGCNDDWLRYIDIANIYVKAGHLVNTESSAVVEAEKS 311
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 240
ITQR+WITYDFLIILYAGL +KDK+DQIWKSLRMTKQKMT+RN++CILSSY+MLGHLKE
Sbjct: 312 ITQREWITYDFLIILYAGLRDKDKVDQIWKSLRMTKQKMTNRNFVCILSSYMMLGHLKEA 371
Query: 241 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 292
GE++DQWK+S T+DFD+SAC+RLL AFS GLTE AN+FHMLL+++NC PTN
Sbjct: 372 GEVLDQWKKSTTTDFDLSACSRLLDAFSGSGLTEIANDFHMLLIERNCDPTN 423
>gi|224141193|ref|XP_002323959.1| predicted protein [Populus trichocarpa]
gi|222866961|gb|EEF04092.1| predicted protein [Populus trichocarpa]
Length = 355
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 221/290 (76%), Positives = 257/290 (88%), Gaps = 2/290 (0%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
MV H+EF LSD+D+A+RIDLMTKVFG+ + ERYF+GLPL+AKT+ETYTALLH YA AK
Sbjct: 66 MVAHEEFELSDTDHASRIDLMTKVFGVDAAERYFDGLPLAAKTTETYTALLHSYAAAKLI 125
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
EKAEE ++R+K SNL F ALMYNEMMTLYMSVGQ+EKV+ VVEE+K + V PDIFTYNLW
Sbjct: 126 EKAEEFYKRIKGSNLPFTALMYNEMMTLYMSVGQLEKVSQVVEELKHQKVAPDIFTYNLW 185
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESST--LVEAE 178
ISSCAA LNID+V++ LDEMS DSG +DDW++Y+ +VNIY+TA HLVNAESST +VEAE
Sbjct: 186 ISSCAAALNIDKVRRILDEMSQDSGVNDDWMRYIKIVNIYVTAGHLVNAESSTAAVVEAE 245
Query: 179 KSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLK 238
K ITQR+WITYDFL+ILYAGLG KDKIDQIWKSLRMT QKMTSRN++CILSSYLMLGHLK
Sbjct: 246 KKITQREWITYDFLVILYAGLGKKDKIDQIWKSLRMTNQKMTSRNFVCILSSYLMLGHLK 305
Query: 239 EVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 288
EVGEI+DQWKQS T+DFDISACNRLL A S +GLTE AN FHMLL+++NC
Sbjct: 306 EVGEIVDQWKQSTTTDFDISACNRLLDAISCLGLTEIANNFHMLLIERNC 355
>gi|356525847|ref|XP_003531533.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial-like [Glycine max]
Length = 395
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 206/289 (71%), Positives = 246/289 (85%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
MV+H+E+ LSDSDYA RIDL TKVFGI + ERYFEGLPL+ KT+ETYTALLH YAGAK T
Sbjct: 103 MVSHEEYELSDSDYAARIDLTTKVFGIDAAERYFEGLPLATKTAETYTALLHSYAGAKLT 162
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
+KAEEL++R+K SNLSF+AL YNEMMTLYMSVGQ EKV VVEE+K++ V PDIFTYNLW
Sbjct: 163 KKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQFEKVPSVVEELKQQKVSPDIFTYNLW 222
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
IS CAA LNID+V++ LDEMS +G ++ W++Y+NL NIYI+ HL NA S+TLVE EK
Sbjct: 223 ISYCAAILNIDEVRRILDEMSHGAGSNESWIRYLNLANIYISVGHLDNASSNTLVETEKR 282
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 240
ITQRQWITYDFLIILY GLG+KDK+DQIW SLRMTKQKM SRNYICI+SSYLMLGH KEV
Sbjct: 283 ITQRQWITYDFLIILYGGLGSKDKLDQIWNSLRMTKQKMISRNYICIISSYLMLGHTKEV 342
Query: 241 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCA 289
GE+IDQWKQS T+DFD+ AC +++ AF D+GL E AN +M+L++KN +
Sbjct: 343 GEVIDQWKQSTTTDFDMLACKKIMVAFRDMGLAEIANNLNMILIEKNLS 391
>gi|359484901|ref|XP_002268952.2| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial [Vitis vinifera]
Length = 396
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 206/294 (70%), Positives = 250/294 (85%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
MV+H EF LSDSD A RIDLMT+VFGI + ERYFEGLP +AKTSETYTALLH YAGAK
Sbjct: 102 MVSHDEFELSDSDNAVRIDLMTRVFGIDAAERYFEGLPSAAKTSETYTALLHSYAGAKLA 161
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
EKAEEL+ER+K+SN+ N L+YNEMMTLYMSVGQVEKV+LVVEE+KR+ VVPD+FTYNLW
Sbjct: 162 EKAEELYERIKESNVPLNILLYNEMMTLYMSVGQVEKVSLVVEELKRQKVVPDLFTYNLW 221
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
+SSCAATL+ID V++ L EMS +S +D WV+Y NL NIYI A HLVN+ S+++VEA +
Sbjct: 222 VSSCAATLDIDGVRRILKEMSNNSSANDGWVRYRNLANIYIMAGHLVNSASNSVVEAGTN 281
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 240
TQR WITYDFLIILYAGLGNKDKIDQIWKSL+MTKQK+ SR+Y+CILSSY+MLGH+K+V
Sbjct: 282 TTQRDWITYDFLIILYAGLGNKDKIDQIWKSLKMTKQKIKSRSYVCILSSYVMLGHIKDV 341
Query: 241 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
G +ID+WK+S T+DFDIS RLL AF+++ L E+A FH LL++K+C PT+ S
Sbjct: 342 GIVIDEWKKSTTTDFDISVFYRLLDAFAELRLIEEAETFHKLLIRKSCLPTDES 395
>gi|356554749|ref|XP_003545705.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial-like [Glycine max]
Length = 399
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 204/289 (70%), Positives = 248/289 (85%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
MV+++E+ LSDSDYA RIDLMT+VFGI + ERYFEGLPL+ KT+ETYTALLH YAGAK T
Sbjct: 107 MVSNEEYELSDSDYAVRIDLMTQVFGIDAAERYFEGLPLATKTTETYTALLHSYAGAKLT 166
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
EKAEEL++R+K SNLSF+AL YNEMMTLYMSVGQ EKV +VVEE+K++ V PDIFTYNLW
Sbjct: 167 EKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQFEKVPIVVEELKQQKVSPDIFTYNLW 226
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
ISSCAA LNID+V++ LDEMS +G ++ W++Y+NL NIYI+ +HL NA S+TLVE EK
Sbjct: 227 ISSCAAILNIDEVRRILDEMSHGAGSNESWIRYLNLANIYISVAHLDNASSNTLVETEKR 286
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 240
ITQRQWITYDFLIILY GLG+KDK+DQIW SL MTKQKM SRNY+CI+SSYLMLG KEV
Sbjct: 287 ITQRQWITYDFLIILYGGLGSKDKLDQIWNSLGMTKQKMISRNYMCIISSYLMLGLTKEV 346
Query: 241 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCA 289
GE+IDQWKQS T+DFD+ AC ++L AF D+GL E AN +++L++KN +
Sbjct: 347 GEVIDQWKQSTTTDFDMLACKKILVAFRDIGLAEIANNLNVILIEKNLS 395
>gi|449438238|ref|XP_004136896.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial-like [Cucumis sativus]
gi|449478839|ref|XP_004155431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial-like [Cucumis sativus]
Length = 406
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 191/293 (65%), Positives = 247/293 (84%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
MV+H + LSDSD+A RIDLMTKVFG+ + ERYFEGLP+ AKT ETYTALLH +AG+K T
Sbjct: 114 MVSHNQSELSDSDFAIRIDLMTKVFGVDAAERYFEGLPIDAKTCETYTALLHSFAGSKLT 173
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
+KAE L+E++K+S++ AL +NEMMTLY S+GQVEKV+ +V+++K++ V PDIFTYNLW
Sbjct: 174 DKAETLYEKMKESDIPLTALPFNEMMTLYTSIGQVEKVSSIVDDLKQRMVHPDIFTYNLW 233
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
ISS AA LNID VK+ L+EM+ + +++WV+Y+ LVNIY+ +++L+++ES+++VE+
Sbjct: 234 ISSLAAALNIDGVKQILNEMNHNPNSNENWVRYIELVNIYVKSANLLHSESNSVVESVSG 293
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 240
I+QR+WITYD LIILYAGLGNKDKIDQIW+SLRMTKQKMTSRNYICI+S YLML LKE+
Sbjct: 294 ISQREWITYDLLIILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICIVSCYLMLDDLKEI 353
Query: 241 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNA 293
GE+IDQWKQS T+DFDIS+CNRL+ AF + GL EKAN F +L+QKNC PT A
Sbjct: 354 GEVIDQWKQSTTTDFDISSCNRLVNAFIEAGLHEKANSFVNVLIQKNCEPTEA 406
>gi|297806979|ref|XP_002871373.1| hypothetical protein ARALYDRAFT_487758 [Arabidopsis lyrata subsp.
lyrata]
gi|297317210|gb|EFH47632.1| hypothetical protein ARALYDRAFT_487758 [Arabidopsis lyrata subsp.
lyrata]
Length = 410
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 184/293 (62%), Positives = 238/293 (81%), Gaps = 1/293 (0%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
MV H+E +SD+DYA+RIDL++KVFGI + ERYFEGL + AKT+ETYT+LLH YAG+K T
Sbjct: 114 MVQHEELKVSDADYASRIDLISKVFGIDAAERYFEGLHIDAKTTETYTSLLHAYAGSKQT 173
Query: 61 EKAEELFERVKQSN-LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNL 119
E+AE LF+R+ +++ LSF A+ YNEMMTLYMSVGQVEKV V++ +K K V PDIFTYNL
Sbjct: 174 ERAEALFKRIIETDSLSFGAITYNEMMTLYMSVGQVEKVPEVIQVLKHKKVSPDIFTYNL 233
Query: 120 WISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK 179
W+SSCAAT NID++++ L+EM D+ ++ WV+Y+NL +IYI +S + NAES++ VEAEK
Sbjct: 234 WLSSCAATFNIDELRRILEEMRHDASSNEGWVRYINLTSIYINSSRVTNAESTSPVEAEK 293
Query: 180 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 239
SI+QR+WITYDFL+IL+ GLGNK IDQIWKSL T QK++SR+YIC+LSSYLMLGHL+E
Sbjct: 294 SISQREWITYDFLMILHTGLGNKVMIDQIWKSLGNTNQKLSSRSYICVLSSYLMLGHLRE 353
Query: 240 VGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 292
EII QWK+S T++FD SAC R+L AF DVGL A+ FH+LL+ C+ N
Sbjct: 354 AEEIIHQWKESKTTEFDASACLRILNAFRDVGLEGVASGFHLLLVYNKCSLEN 406
>gi|18415979|ref|NP_568214.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75165070|sp|Q94B59.1|PP372_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g09450, mitochondrial; Flags: Precursor
gi|14596093|gb|AAK68774.1| putative protein [Arabidopsis thaliana]
gi|27311913|gb|AAO00922.1| putative protein [Arabidopsis thaliana]
gi|332004012|gb|AED91395.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 409
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 182/293 (62%), Positives = 237/293 (80%), Gaps = 1/293 (0%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
MV H+E +SD+DYA+RIDL++KVFGI + ERYFEGL + +KT+ETYT+LLH YA +K T
Sbjct: 113 MVQHEESKISDADYASRIDLISKVFGIDAAERYFEGLDIDSKTAETYTSLLHAYAASKQT 172
Query: 61 EKAEELFERVKQSN-LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNL 119
E+AE LF+R+ +S+ L+F A+ YNEMMTLYMSVGQVEKV V+E +K+K V PDIFTYNL
Sbjct: 173 ERAEALFKRIIESDSLTFGAITYNEMMTLYMSVGQVEKVPEVIEVLKQKKVSPDIFTYNL 232
Query: 120 WISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK 179
W+SSCAAT NID+++K L+EM D+ ++ WV+Y++L +IYI +S + NAES+ VEAEK
Sbjct: 233 WLSSCAATFNIDELRKILEEMRHDASSNEGWVRYIDLTSIYINSSRVTNAESTLPVEAEK 292
Query: 180 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 239
SI+QR+WITYDFL+IL+ GLGNK IDQIWKSLR T Q ++SR+YIC+LSSYLMLGHL+E
Sbjct: 293 SISQREWITYDFLMILHTGLGNKVMIDQIWKSLRNTNQILSSRSYICVLSSYLMLGHLRE 352
Query: 240 VGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 292
EII QWK+S T++FD SAC R+L AF DVGL A+ FH++L+ C+ N
Sbjct: 353 AEEIIHQWKESKTTEFDASACLRILNAFRDVGLEGIASGFHLILVHNKCSLEN 405
>gi|21592522|gb|AAM64472.1| unknown [Arabidopsis thaliana]
Length = 409
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 182/293 (62%), Positives = 237/293 (80%), Gaps = 1/293 (0%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
MV H+E +SD+DYA+RIDL++KVFGI + ERYFEGL + +KT+ETYT+LLH YA +K T
Sbjct: 113 MVQHEESKISDADYASRIDLISKVFGIDAAERYFEGLHIDSKTAETYTSLLHAYAASKQT 172
Query: 61 EKAEELFERVKQSN-LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNL 119
E+AE LF+R+ +S+ L+F A+ YNEMMTLYMSVGQVEKV V+E +K+K V PDIFTYNL
Sbjct: 173 ERAEALFKRIIESDSLTFGAITYNEMMTLYMSVGQVEKVPEVIEVLKQKKVSPDIFTYNL 232
Query: 120 WISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK 179
W+SSCAAT NID+++K L+EM D+ ++ WV+Y++L +IYI +S + NAES+ VEAEK
Sbjct: 233 WLSSCAATFNIDELRKILEEMRHDASSNEGWVRYIDLTSIYINSSRVTNAESTLPVEAEK 292
Query: 180 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 239
SI+QR+WITYDFL+IL+ GLGNK IDQIWKSLR T Q ++SR+YIC+LSSYLMLGHL+E
Sbjct: 293 SISQREWITYDFLMILHTGLGNKVMIDQIWKSLRNTNQILSSRSYICVLSSYLMLGHLRE 352
Query: 240 VGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 292
EII QWK+S T++FD SAC R+L AF DVGL A+ FH++L+ C+ N
Sbjct: 353 AEEIIHQWKESKTTEFDASACLRILNAFRDVGLEGIASGFHLILVHNKCSLEN 405
>gi|9955532|emb|CAC05471.1| putative protein [Arabidopsis thaliana]
Length = 402
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 180/290 (62%), Positives = 235/290 (81%), Gaps = 1/290 (0%)
Query: 4 HKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKA 63
H+E +SD+DYA+RIDL++KVFGI + ERYFEGL + +KT+ETYT+LLH YA +K TE+A
Sbjct: 109 HEESKISDADYASRIDLISKVFGIDAAERYFEGLDIDSKTAETYTSLLHAYAASKQTERA 168
Query: 64 EELFERVKQSN-LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 122
E LF+R+ +S+ L+F A+ YNEMMTLYMSVGQVEKV V+E +K+K V PDIFTYNLW+S
Sbjct: 169 EALFKRIIESDSLTFGAITYNEMMTLYMSVGQVEKVPEVIEVLKQKKVSPDIFTYNLWLS 228
Query: 123 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT 182
SCAAT NID+++K L+EM D+ ++ WV+Y++L +IYI +S + NAES+ VEAEKSI+
Sbjct: 229 SCAATFNIDELRKILEEMRHDASSNEGWVRYIDLTSIYINSSRVTNAESTLPVEAEKSIS 288
Query: 183 QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 242
QR+WITYDFL+IL+ GLGNK IDQIWKSLR T Q ++SR+YIC+LSSYLMLGHL+E E
Sbjct: 289 QREWITYDFLMILHTGLGNKVMIDQIWKSLRNTNQILSSRSYICVLSSYLMLGHLREAEE 348
Query: 243 IIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 292
II QWK+S T++FD SAC R+L AF DVGL A+ FH++L+ C+ N
Sbjct: 349 IIHQWKESKTTEFDASACLRILNAFRDVGLEGIASGFHLILVHNKCSLEN 398
>gi|388490914|gb|AFK33523.1| unknown [Lotus japonicus]
Length = 358
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/244 (72%), Positives = 211/244 (86%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M+TH+E LSDSDYA RIDLMTKVFGI + ERYFE LP++AKTSETYTALLH YAGAK T
Sbjct: 108 MITHEEHGLSDSDYAMRIDLMTKVFGIDAAERYFEALPVAAKTSETYTALLHSYAGAKMT 167
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
EKAEEL++R+K SNLSF+AL YNEMMTLYMSVGQVEKV VVEE+K++NV PDIFTYNLW
Sbjct: 168 EKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEELKQRNVSPDIFTYNLW 227
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
ISSCAATLNID+V++ LDEMS + ++ W +Y+NL N+Y+TAS L N+ S++L E EK
Sbjct: 228 ISSCAATLNIDEVRRILDEMSHGADSNESWTRYLNLANVYVTASRLDNSSSNSLAETEKR 287
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 240
ITQ QWITYDFLIILYAGLG+KDK+DQIW SLRMTKQKM +RNY CI+S+YLMLGH+KEV
Sbjct: 288 ITQSQWITYDFLIILYAGLGSKDKLDQIWNSLRMTKQKMINRNYSCIISAYLMLGHVKEV 347
Query: 241 GEII 244
++
Sbjct: 348 VRLL 351
>gi|242073288|ref|XP_002446580.1| hypothetical protein SORBIDRAFT_06g018360 [Sorghum bicolor]
gi|241937763|gb|EES10908.1| hypothetical protein SORBIDRAFT_06g018360 [Sorghum bicolor]
Length = 415
Score = 362 bits (929), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 169/292 (57%), Positives = 223/292 (76%), Gaps = 1/292 (0%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M TH E LS+SDY RIDL+TKVFG + E +FE LP AK+ E YTALLH Y +K T
Sbjct: 119 MKTHHESDLSESDYGMRIDLITKVFGASAAEDFFEKLPPGAKSLEAYTALLHSYGRSKMT 178
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
+KAE LFER+K +NLS +AL+YNEMMTLY+SVG+++KV ++ EE+KR+NV PD+FTYNL
Sbjct: 179 DKAERLFERMKDANLSMDALVYNEMMTLYISVGELDKVEIIAEELKRQNVSPDLFTYNLR 238
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
+S+ AA+++++ K LDEMS D + W Y NL ++Y+ AS LV + +S LVEAE
Sbjct: 239 VSAAAASMDLEGFKGILDEMSKDPNSKEGWTLYRNLASVYVDASQLVGSGNS-LVEAEAK 297
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 240
I+QR+WITYDFL+IL+AGLGN+++I IWKS+ MT Q+MTSRNYIC++SSYLM G LK+
Sbjct: 298 ISQREWITYDFLVILHAGLGNQERIKDIWKSMVMTSQRMTSRNYICVISSYLMCGQLKDA 357
Query: 241 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 292
GEI+DQW++S +FDISACNRLL A GLT+ A+ F L+LQK+C T+
Sbjct: 358 GEIVDQWQRSKAPEFDISACNRLLDALLSAGLTDTADRFRELMLQKSCILTS 409
>gi|357163843|ref|XP_003579864.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial-like [Brachypodium distachyon]
Length = 422
Score = 352 bits (904), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 167/295 (56%), Positives = 222/295 (75%), Gaps = 1/295 (0%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M TH E LS++DY RIDL+TKVFG ++ E +FE LP AK+ E YTALLH YA +K T
Sbjct: 126 MKTHHESDLSENDYGVRIDLITKVFGANAAEDFFEKLPSEAKSLEAYTALLHSYARSKMT 185
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
+KAE LFER+K ++LS + L+YNEMMTLY+SVG+++KV V EE+KR+NV PD+FTYNL
Sbjct: 186 DKAERLFERMKDADLSIDVLVYNEMMTLYISVGELDKVPAVAEELKRQNVSPDLFTYNLR 245
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
IS+ AA+++++ K LDEMS D ++ W Y NL IY+ AS LV++ +S LVEAE
Sbjct: 246 ISASAASMDLEIFKGILDEMSKDPNSNEGWTLYRNLATIYVNASQLVSSGNS-LVEAEAK 304
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 240
I+QR+WITYDFLI+L+ GLGN +++ IWKS++MT Q+MTSRNYIC+LSSYLM G LK+
Sbjct: 305 ISQREWITYDFLILLHTGLGNLERVKDIWKSMQMTSQRMTSRNYICVLSSYLMCGQLKDA 364
Query: 241 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNASG 295
EI+DQW++S +FDISACNRL A G T+ A+ F L+LQK+C T+ +G
Sbjct: 365 KEIVDQWQRSKAPEFDISACNRLFDALLGAGFTDTADSFRELMLQKSCILTSMAG 419
>gi|125548508|gb|EAY94330.1| hypothetical protein OsI_16098 [Oryza sativa Indica Group]
Length = 430
Score = 351 bits (901), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 164/288 (56%), Positives = 217/288 (75%), Gaps = 1/288 (0%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M TH E LS++DY RIDL+T+VFG ++ E +FE LP ++ E YTALLH YA +K T
Sbjct: 134 MKTHHESDLSENDYGMRIDLITRVFGANAAEDFFEKLPACVQSLEAYTALLHSYARSKMT 193
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
+KAE LF+R+K +NLS N L+YNEMMTLY+SVG+++KV ++ EE+KR+ PD+FTYNL
Sbjct: 194 DKAERLFKRMKDANLSMNILVYNEMMTLYISVGELDKVPVIAEELKRQKFSPDLFTYNLR 253
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
IS+ AA+++++ K LDEMS D ++ W Y NL IY+ A LV + +S LVEAE
Sbjct: 254 ISASAASMDLEGFKGILDEMSKDPNSNEGWKLYQNLAVIYVDAGQLVGSGNS-LVEAEAK 312
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 240
I+QR+WITYDFL+IL+ GLGN+D+I IWKS+ MT Q+MTSRNYIC+LSSYLM G LK+
Sbjct: 313 ISQREWITYDFLVILHTGLGNRDRIKDIWKSMLMTSQRMTSRNYICVLSSYLMCGQLKDA 372
Query: 241 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 288
GE+IDQW++S +FDISACNRL AF + G T+ AN F L+LQK+C
Sbjct: 373 GEVIDQWQRSKAPEFDISACNRLFDAFLNAGFTDTANSFRELMLQKSC 420
>gi|125590560|gb|EAZ30910.1| hypothetical protein OsJ_14991 [Oryza sativa Japonica Group]
Length = 471
Score = 351 bits (900), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 163/288 (56%), Positives = 217/288 (75%), Gaps = 1/288 (0%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M TH E LS++DY RIDL+T+VFG ++ E +FE LP ++ E YTALLH YA +K T
Sbjct: 175 MKTHHESDLSENDYGMRIDLITRVFGANAAEDFFEKLPACVQSLEAYTALLHSYARSKMT 234
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
+KAE LF+R+K +NLS N L+YNEMMTLY+SVG+++KV ++ EE+KR+ PD+FTYNL
Sbjct: 235 DKAERLFKRMKDANLSMNILVYNEMMTLYISVGELDKVPVIAEELKRQKFSPDLFTYNLR 294
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
IS+ AA+++++ K LDEMS D ++ W Y NL IY+ A LV + +S LVEAE
Sbjct: 295 ISASAASMDLEGFKGILDEMSKDPNSNEGWKLYQNLAVIYVDAGQLVGSGNS-LVEAEAK 353
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 240
I++R+WITYDFL+IL+ GLGN+D+I IWKS+ MT Q+MTSRNYIC+LSSYLM G LK+
Sbjct: 354 ISRREWITYDFLVILHTGLGNRDRIKDIWKSMLMTSQRMTSRNYICVLSSYLMCGQLKDA 413
Query: 241 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 288
GE+IDQW++S +FDISACNRL AF + G T+ AN F L+LQK+C
Sbjct: 414 GEVIDQWQRSKAPEFDISACNRLFDAFLNAGFTDTANSFRELMLQKSC 461
>gi|21740710|emb|CAD40831.1| OSJNBa0086B14.3 [Oryza sativa Japonica Group]
gi|116310079|emb|CAH67100.1| H0818E04.17 [Oryza sativa Indica Group]
Length = 430
Score = 350 bits (898), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 163/288 (56%), Positives = 217/288 (75%), Gaps = 1/288 (0%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M TH E LS++DY RIDL+T+VFG ++ E +FE LP ++ E YTALLH YA +K T
Sbjct: 134 MKTHHESDLSENDYGMRIDLITRVFGANAAEDFFEKLPACVQSLEAYTALLHSYARSKMT 193
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
+KAE LF+R+K +NLS N L+YNEMMTLY+SVG+++KV ++ EE+KR+ PD+FTYNL
Sbjct: 194 DKAERLFKRMKDANLSMNILVYNEMMTLYISVGELDKVPVIAEELKRQKFSPDLFTYNLR 253
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
IS+ AA+++++ K LDEMS D ++ W Y NL IY+ A LV + +S LVEAE
Sbjct: 254 ISASAASMDLEGFKGILDEMSKDPNSNEGWKLYQNLAVIYVDAGQLVGSGNS-LVEAEAK 312
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 240
I++R+WITYDFL+IL+ GLGN+D+I IWKS+ MT Q+MTSRNYIC+LSSYLM G LK+
Sbjct: 313 ISRREWITYDFLVILHTGLGNRDRIKDIWKSMLMTSQRMTSRNYICVLSSYLMCGQLKDA 372
Query: 241 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 288
GE+IDQW++S +FDISACNRL AF + G T+ AN F L+LQK+C
Sbjct: 373 GEVIDQWQRSKAPEFDISACNRLFDAFLNAGFTDTANSFRELMLQKSC 420
>gi|326504724|dbj|BAK06653.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326523789|dbj|BAJ93065.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 419
Score = 345 bits (885), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 157/288 (54%), Positives = 219/288 (76%), Gaps = 1/288 (0%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M TH E LS++DY RIDL+TKVFG ++ E +FE LP +AK+ E YTALLH YA +K
Sbjct: 123 MKTHHESDLSENDYGVRIDLITKVFGANAAEDFFEKLPPAAKSLEAYTALLHSYARSKMI 182
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
+KAE LF+R+K ++L + L+YNEMMTLY+SVG+++KV ++ EE+KR+NV PD+FTYNL
Sbjct: 183 DKAERLFQRMKDADLPIDVLVYNEMMTLYISVGELDKVPILAEELKRQNVSPDLFTYNLR 242
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
IS+ A+++++ K LDEMS D ++ W+ Y NL +IY+ AS LV++ +S LVEAE
Sbjct: 243 ISASVASMDLEAFKGILDEMSKDPNSNEGWMLYRNLASIYVDASQLVSSGNS-LVEAEAK 301
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 240
I+QR+WITYD L+IL+AGLGN D++ IWKS++MT Q+MTSRNY+C+LS+YLM G LK+
Sbjct: 302 ISQREWITYDLLVILHAGLGNLDRVKDIWKSMQMTAQRMTSRNYVCVLSAYLMCGQLKDA 361
Query: 241 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 288
E++DQW++S +FD+SACNRL A G T+ A+ F L+LQK+C
Sbjct: 362 AEVVDQWQRSKVPEFDVSACNRLFDALLAAGFTDTADSFRELMLQKSC 409
>gi|326520694|dbj|BAJ92710.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 419
Score = 342 bits (878), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 156/288 (54%), Positives = 218/288 (75%), Gaps = 1/288 (0%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M TH E LS++DY RIDL+TKVFG ++ E +FE LP +AK+ E YTALLH YA +K
Sbjct: 123 MKTHHESDLSENDYGVRIDLITKVFGANAAEDFFEKLPPAAKSLEAYTALLHSYARSKMI 182
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
+KAE LF+R+K ++L + L+YNEMMTLY+SVG+++KV ++ EE+KR+NV PD+FTYNL
Sbjct: 183 DKAERLFQRMKDADLPIDVLVYNEMMTLYISVGELDKVPILAEELKRQNVSPDLFTYNLR 242
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
IS+ A+++++ K LDEMS D ++ W+ Y NL +IY+ AS LV++ +S LVEAE
Sbjct: 243 ISASVASMDLEAFKGILDEMSKDPNSNEGWMLYRNLASIYVDASQLVSSGNS-LVEAEAK 301
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 240
I+QR+WITYD L+IL+AGLGN D++ IWKS++MT Q+MTSRNY+C+LS+YLM G LK+
Sbjct: 302 ISQREWITYDLLVILHAGLGNLDRVKDIWKSMQMTAQRMTSRNYVCVLSAYLMCGQLKDA 361
Query: 241 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 288
++DQW++S +FD+SACNRL A G T+ A+ F L+LQK+C
Sbjct: 362 AGVVDQWQRSKVPEFDVSACNRLFDALLAAGFTDTADSFRELMLQKSC 409
>gi|115458674|ref|NP_001052937.1| Os04g0450200 [Oryza sativa Japonica Group]
gi|113564508|dbj|BAF14851.1| Os04g0450200, partial [Oryza sativa Japonica Group]
Length = 292
Score = 342 bits (878), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 160/284 (56%), Positives = 215/284 (75%), Gaps = 1/284 (0%)
Query: 9 LSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFE 68
LS++DY RIDL+T+VFG ++ E +FE LP ++ E YTALLH YA +K T+KAE LF+
Sbjct: 4 LSENDYGMRIDLITRVFGANAAEDFFEKLPACVQSLEAYTALLHSYARSKMTDKAERLFK 63
Query: 69 RVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATL 128
R+K +NLS N L+YNEMMTLY+SVG+++KV ++ EE+KR+ PD+FTYNL IS+ AA++
Sbjct: 64 RMKDANLSMNILVYNEMMTLYISVGELDKVPVIAEELKRQKFSPDLFTYNLRISASAASM 123
Query: 129 NIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWIT 188
+++ K LDEMS D ++ W Y NL IY+ A LV + +S LVEAE I++R+WIT
Sbjct: 124 DLEGFKGILDEMSKDPNSNEGWKLYQNLAVIYVDAGQLVGSGNS-LVEAEAKISRREWIT 182
Query: 189 YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK 248
YDFL+IL+ GLGN+D+I IWKS+ MT Q+MTSRNYIC+LSSYLM G LK+ GE+IDQW+
Sbjct: 183 YDFLVILHTGLGNRDRIKDIWKSMLMTSQRMTSRNYICVLSSYLMCGQLKDAGEVIDQWQ 242
Query: 249 QSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 292
+S +FDISACNRL AF + G T+ AN F L+LQK+C T+
Sbjct: 243 RSKAPEFDISACNRLFDAFLNAGFTDTANSFRELMLQKSCILTS 286
>gi|226528511|ref|NP_001143788.1| uncharacterized protein LOC100276555 [Zea mays]
gi|195627038|gb|ACG35349.1| hypothetical protein [Zea mays]
Length = 422
Score = 318 bits (815), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 154/304 (50%), Positives = 213/304 (70%), Gaps = 10/304 (3%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M TH E LS++DY RIDL+TKVFG + E +FE LP AK+ E YTALLH Y +K T
Sbjct: 112 MKTHHESDLSENDYGMRIDLITKVFGASAAEDFFEKLPAGAKSLEAYTALLHSYGRSKMT 171
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
++AE LFER+K ++L +AL+YNEMMTLY+SVG++ KV V EE+KR+NV PD+FTYNL
Sbjct: 172 DRAERLFERMKGASLPMDALVYNEMMTLYISVGELGKVEAVAEELKRQNVSPDLFTYNLR 231
Query: 121 ISSCAATLNIDQVKKFLDEMSCD--SGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA- 177
S+ AA+++++ + LDEMS D S W Y +L ++Y+ A L+ + +S VEA
Sbjct: 232 ASAAAASMDLEGFRAVLDEMSRDLKSSTEGGWALYRDLASVYVDAGQLLGSVNSPPVEAG 291
Query: 178 EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMT-------KQKMTSRNYICILSS 230
E I+QR+WITYDFL+IL+AGLG ++I IW+S+ T +Q+MTSRNY+C++SS
Sbjct: 292 EARISQREWITYDFLVILHAGLGRPERIRDIWRSMVATSQSQSQSQQRMTSRNYVCVVSS 351
Query: 231 YLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
YL G L++ GE++DQW++S +FD+SACNRLL A GL + A F L+LQK C
Sbjct: 352 YLACGRLEDAGEVVDQWQRSKAPEFDVSACNRLLDALLRAGLADAAGRFRELMLQKRCIL 411
Query: 291 TNAS 294
T++S
Sbjct: 412 TSSS 415
>gi|414586983|tpg|DAA37554.1| TPA: hypothetical protein ZEAMMB73_139718 [Zea mays]
Length = 423
Score = 317 bits (813), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 152/298 (51%), Positives = 210/298 (70%), Gaps = 10/298 (3%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M TH E LS++DY RIDL+TKVFG + E +FE LP AK+ E YTALLH Y +K T
Sbjct: 112 MKTHHESDLSENDYGMRIDLITKVFGASAAEDFFEKLPPGAKSLEAYTALLHSYGRSKMT 171
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
++AE LFER+K ++L +AL+YNEMMTLY+SVG++ KV V EE+KR+NV PD+FTYNL
Sbjct: 172 DRAERLFERMKDASLPMDALVYNEMMTLYISVGELGKVEAVAEELKRQNVSPDLFTYNLR 231
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDD--WVKYVNLVNIYITASHLVNAESSTLVEA- 177
S+ AA+++++ + LDEMS D S + W Y +L ++Y+ A L+ + +S VEA
Sbjct: 232 ASAAAASMDLEGFRAVLDEMSRDPKSSTEGGWALYRDLASVYVDAGQLLGSVNSPPVEAG 291
Query: 178 EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMT-------KQKMTSRNYICILSS 230
E I+QR+WITYDFL+IL+AGLG ++I IW+S+ T +Q+MTSRNY+C++SS
Sbjct: 292 EARISQREWITYDFLVILHAGLGRPERIRDIWRSMVATSQSQSQQQQRMTSRNYVCVVSS 351
Query: 231 YLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 288
YL G L++ GE++DQW++S +FD+SACNRLL A GL + A F L+LQK C
Sbjct: 352 YLACGRLEDAGEVVDQWQRSKAPEFDVSACNRLLDALLRAGLADAAGRFRELMLQKRC 409
>gi|296090465|emb|CBI40661.3| unnamed protein product [Vitis vinifera]
Length = 287
Score = 254 bits (650), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 119/165 (72%), Positives = 140/165 (84%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
MV+H EF LSDSD A RIDLMT+VFGI + ERYFEGLP +AKTSETYTALLH YAGAK
Sbjct: 109 MVSHDEFELSDSDNAVRIDLMTRVFGIDAAERYFEGLPSAAKTSETYTALLHSYAGAKLA 168
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
EKAEEL+ER+K+SN+ N L+YNEMMTLYMSVGQVEKV+LVVEE+KR+ VVPD+FTYNLW
Sbjct: 169 EKAEELYERIKESNVPLNILLYNEMMTLYMSVGQVEKVSLVVEELKRQKVVPDLFTYNLW 228
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+SSCAATL+ID V++ L EMS +S +D WV+Y NL NIYI A +
Sbjct: 229 VSSCAATLDIDGVRRILKEMSNNSSANDGWVRYRNLANIYIMADY 273
>gi|297837423|ref|XP_002886593.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332434|gb|EFH62852.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 491
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 105/268 (39%), Positives = 161/268 (60%), Gaps = 2/268 (0%)
Query: 12 SDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVK 71
SD A +DL+ K GI +GE YF LP ++KT TY +LL+ Y TEKAE L ++K
Sbjct: 91 SDQAIHLDLVAKARGITAGENYFVDLPETSKTELTYGSLLNCYCKELLTEKAEGLLNKMK 150
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
+ N++ +++ YN +MTLY GQ EKV +++E+K +NV+PD +TYN+W+ + AAT +I
Sbjct: 151 ELNITPSSMSYNSLMTLYTKTGQTEKVPAMIQELKAENVMPDSYTYNVWMRALAATNDIS 210
Query: 132 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 191
V++ ++EM+ D + DW Y N+ +IY+ A AE + L E E TQR + Y F
Sbjct: 211 GVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKA-LQELEMKNTQRDFTAYQF 269
Query: 192 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 251
LI LY LG ++ +IW+SLR+ K ++ Y+ ++ + L L + +W Q+
Sbjct: 270 LITLYGRLGKLTEVYRIWRSLRLAMPKTSNVAYLNMIQVLVKLNDLPGAETLFKEW-QAN 328
Query: 252 TSDFDISACNRLLGAFSDVGLTEKANEF 279
S +DI N L+GA++ GL EKA E
Sbjct: 329 CSTYDIRIVNVLIGAYAKEGLIEKAKEL 356
>gi|15219808|ref|NP_176276.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097554|sp|O22714.1|PPR86_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g60770
gi|2462744|gb|AAB71963.1| Hypothetical protein [Arabidopsis thaliana]
gi|27754491|gb|AAO22693.1| unknown protein [Arabidopsis thaliana]
gi|28393975|gb|AAO42395.1| unknown protein [Arabidopsis thaliana]
gi|332195609|gb|AEE33730.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 491
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 103/268 (38%), Positives = 161/268 (60%), Gaps = 2/268 (0%)
Query: 12 SDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVK 71
SD A +DL+ K I +GE YF LP ++KT TY +LL+ Y TEKAE L ++K
Sbjct: 91 SDQAIHLDLVAKAREITAGENYFVDLPETSKTELTYGSLLNCYCKELLTEKAEGLLNKMK 150
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
+ N++ +++ YN +MTLY G+ EKV +++E+K +NV+PD +TYN+W+ + AAT +I
Sbjct: 151 ELNITPSSMSYNSLMTLYTKTGETEKVPAMIQELKAENVMPDSYTYNVWMRALAATNDIS 210
Query: 132 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 191
V++ ++EM+ D + DW Y N+ +IY+ A AE + L E E TQR + Y F
Sbjct: 211 GVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKA-LQELEMKNTQRDFTAYQF 269
Query: 192 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 251
LI LY LG ++ +IW+SLR+ K ++ Y+ ++ + L L + +W Q+
Sbjct: 270 LITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYLNMIQVLVKLNDLPGAETLFKEW-QAN 328
Query: 252 TSDFDISACNRLLGAFSDVGLTEKANEF 279
S +DI N L+GA++ GL +KANE
Sbjct: 329 CSTYDIRIVNVLIGAYAQEGLIQKANEL 356
>gi|356536769|ref|XP_003536907.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
mitochondrial-like [Glycine max]
Length = 516
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 100/290 (34%), Positives = 169/290 (58%), Gaps = 4/290 (1%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M K+ L DYA +DL+TKV G++S E++FE LP + +T +ALLH Y
Sbjct: 103 MTLQKDMKLVQGDYAVHLDLITKVRGLNSAEKFFEDLPDRMRGKQTCSALLHAYVQNNLV 162
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
+KAE L ++ + +L N L YN M++LY+S G++EKV +++E+K N PDI T+NLW
Sbjct: 163 DKAEALMLKMSECDLLINPLPYNHMISLYISNGKLEKVPKIIQELK-MNTSPDIVTFNLW 221
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
+++CA+ +++ ++ L E+ + DWV Y L N+YI + L A +T+ E E
Sbjct: 222 LAACASQNDVETAERVLLELK-KAKIDPDWVTYSTLTNLYIKNASLEKA-GATVKEMENR 279
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 240
+++ + Y L+ L+ +GNKD +++IW+ ++ + +KM YIC++SS L LG
Sbjct: 280 TSRKTRVAYSSLLSLHTNMGNKDDVNRIWEKMKASFRKMNDNEYICMISSLLKLGDFAGA 339
Query: 241 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
++ +W +S + D+ N LLG++ + E A +F ++QK P
Sbjct: 340 EDLYREW-ESVSGTNDVRVSNILLGSYINQDQMEMAEDFCNQIVQKGVIP 388
>gi|296083491|emb|CBI23460.3| unnamed protein product [Vitis vinifera]
Length = 444
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 101/279 (36%), Positives = 159/279 (56%), Gaps = 2/279 (0%)
Query: 12 SDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVK 71
SD A +DL+TK G+ + E YF LP ++K TY ALL+ Y TEKAE L ER+K
Sbjct: 90 SDQAIYLDLITKTRGVAAAENYFIDLPETSKNHLTYGALLNCYCKELLTEKAEALMERMK 149
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
+ L +++ YN +MTLY +GQ EK+ +++E+K +++PD +TYN+W+ + AA +I
Sbjct: 150 ELKLGLSSMPYNSLMTLYTKIGQPEKIPTIIQELKSLDIMPDSYTYNIWMRALAAVNDIS 209
Query: 132 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 191
V++ ++EM D + DW Y NL +IY+ A AE + L E EK R + F
Sbjct: 210 GVERVIEEMKRDGRVASDWTTYSNLASIYVDAGVFEKAEKA-LKELEKRNACRDLTAFQF 268
Query: 192 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 251
LI LY +GN ++ ++W+SLR+ K + +Y+ ++ + L L + +W +S
Sbjct: 269 LITLYGRIGNLLEVYRVWRSLRLAFPKTANVSYLNMIQVLVNLKDLPGAEKCFREW-ESG 327
Query: 252 TSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
S +DI N L+GA++ GL EKA E ++ P
Sbjct: 328 CSIYDIRVANALIGAYAKDGLLEKAEELKEHARRRGAKP 366
>gi|225468646|ref|XP_002267979.1| PREDICTED: pentatricopeptide repeat-containing protein At1g60770
[Vitis vinifera]
Length = 489
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 101/279 (36%), Positives = 159/279 (56%), Gaps = 2/279 (0%)
Query: 12 SDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVK 71
SD A +DL+TK G+ + E YF LP ++K TY ALL+ Y TEKAE L ER+K
Sbjct: 90 SDQAIYLDLITKTRGVAAAENYFIDLPETSKNHLTYGALLNCYCKELLTEKAEALMERMK 149
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
+ L +++ YN +MTLY +GQ EK+ +++E+K +++PD +TYN+W+ + AA +I
Sbjct: 150 ELKLGLSSMPYNSLMTLYTKIGQPEKIPTIIQELKSLDIMPDSYTYNIWMRALAAVNDIS 209
Query: 132 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 191
V++ ++EM D + DW Y NL +IY+ A AE + L E EK R + F
Sbjct: 210 GVERVIEEMKRDGRVASDWTTYSNLASIYVDAGVFEKAEKA-LKELEKRNACRDLTAFQF 268
Query: 192 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 251
LI LY +GN ++ ++W+SLR+ K + +Y+ ++ + L L + +W +S
Sbjct: 269 LITLYGRIGNLLEVYRVWRSLRLAFPKTANVSYLNMIQVLVNLKDLPGAEKCFREW-ESG 327
Query: 252 TSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
S +DI N L+GA++ GL EKA E ++ P
Sbjct: 328 CSIYDIRVANALIGAYAKDGLLEKAEELKEHARRRGAKP 366
>gi|255573975|ref|XP_002527905.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532680|gb|EEF34462.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 490
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 98/279 (35%), Positives = 158/279 (56%), Gaps = 2/279 (0%)
Query: 12 SDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVK 71
SD A +DL+ K GI + E +F LP ++K TY ALL+ Y TE+AE L E++K
Sbjct: 91 SDQAIHLDLVAKTRGIPAAEIFFIDLPETSKNHLTYGALLNCYCNQLMTEEAEALMEKMK 150
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
+ NL +++ YN +MTLY +GQ E++ +++E+K +++PD +TYN+W+ + AA +I
Sbjct: 151 ELNLGLSSMSYNSLMTLYTKIGQPERIPGIIQEMKSDSIMPDSYTYNVWMRALAAVNDIS 210
Query: 132 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 191
++ ++EM D + DW Y NL +IY+ A AE TL E EK R + F
Sbjct: 211 GAERVIEEMKRDGRVAADWTTYSNLASIYVDAQLFEKAE-KTLKELEKRNVHRDHSAFQF 269
Query: 192 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 251
LI LY +GN ++ +IW+SLR+ K ++ +Y+ ++ + L L + +W +S
Sbjct: 270 LITLYGRIGNLHELYRIWRSLRLAFPKTSNISYLNMIQVLVNLKDLPGAEKCFREW-ESN 328
Query: 252 TSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
S +DI N L+ A++ GL EKA E + + P
Sbjct: 329 CSGYDIRVANVLIKAYAKKGLLEKAEELKERAIGRGAKP 367
>gi|449434959|ref|XP_004135263.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g60770-like [Cucumis sativus]
gi|449478594|ref|XP_004155363.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g60770-like [Cucumis sativus]
Length = 489
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 99/279 (35%), Positives = 159/279 (56%), Gaps = 3/279 (1%)
Query: 12 SDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVK 71
SD A +DL+ K GI + E YF LP S+K +Y++LL+ Y TEKAE LFE++K
Sbjct: 93 SDQAIHLDLVAKARGIDAAENYFVSLPESSKNHLSYSSLLNCYCKELLTEKAEALFEKIK 152
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
+ NL + YN +MTLY +G+ +KV +++E+K NV D +TY +W+ + AA +I
Sbjct: 153 ELNLPVTPVPYNSLMTLYSKIGRPDKVCTIIQEMKAANVTFDPYTYIVWMRALAALNDIS 212
Query: 132 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 191
V++ +DEM D G DW Y NL +IY+ A+ A + L + EK T+R I + F
Sbjct: 213 GVERVIDEMKRD-GVKGDWTTYSNLASIYVNANMFEKA-AKALKDLEKINTRRDLIGFQF 270
Query: 192 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 251
LI LY +G+ ++ ++W+SLR+ + + +Y+ ++ + L L + +W +S
Sbjct: 271 LITLYGQIGDLTEVYRVWRSLRLAFPRTANISYLNMIQTLTKLKDLPGAEKCFKEW-ESG 329
Query: 252 TSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
+ +DI N L+GA++ GL EKA L++ P
Sbjct: 330 SPTYDIRIPNALIGAYTKGGLLEKAMALKERALRRGARP 368
>gi|224119780|ref|XP_002331159.1| predicted protein [Populus trichocarpa]
gi|118487894|gb|ABK95769.1| unknown [Populus trichocarpa]
gi|222873242|gb|EEF10373.1| predicted protein [Populus trichocarpa]
Length = 490
Score = 180 bits (456), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 96/283 (33%), Positives = 159/283 (56%), Gaps = 2/283 (0%)
Query: 12 SDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVK 71
SD A +DL+ K GI + E YF LP ++K TY ALL+ Y TE+AE L E++K
Sbjct: 91 SDQAIHLDLVAKTRGIPAAENYFIDLPETSKNLRTYGALLNCYCKELMTEEAEALIEKMK 150
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
+ NL +++ YN +MTLY VGQ E++ +++E+K NV+PD +TYN+W+ + AA +I
Sbjct: 151 ELNLGLSSMSYNSLMTLYTKVGQPERIPAIIQEMKADNVMPDSYTYNVWMRALAAVNDIS 210
Query: 132 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 191
V++ ++EM D + +W Y NL +IY+ A + AE + L E EK + + F
Sbjct: 211 GVERVIEEMKRDGRVAANWTTYSNLASIYVDAGYFDKAEKA-LKELEKINANKDLFAFQF 269
Query: 192 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 251
LI LY G ++ +IW+SLR+ K + +Y+ ++ + L + + +W +S
Sbjct: 270 LITLYGRTGKLIEVYRIWRSLRLAFPKTANISYLNMIQVLVNLKDVPGAEKCFREW-ESG 328
Query: 252 TSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
S +DI N ++ A++ GL +KA E ++ P + +
Sbjct: 329 CSTYDIRVANVVISAYAKEGLVDKAEELKERARRRGAKPNSKT 371
>gi|359490027|ref|XP_002279399.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
mitochondrial-like [Vitis vinifera]
Length = 642
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 102/291 (35%), Positives = 162/291 (55%), Gaps = 4/291 (1%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M + L DYA +DL+ K+ G+ S E++FE L K T TALLH Y K +
Sbjct: 227 MTKQHDIKLLAGDYAVHLDLIAKIRGLASAEKFFEDLSDKMKGQPTCTALLHTYVQNKVS 286
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
EKAE L E++ + L YN M++LY+S GQ+EKV +++E+K KN PD+ TYNLW
Sbjct: 287 EKAEALMEKMSECGFLKCPLPYNHMISLYISDGQLEKVPGMIQELK-KNTSPDVVTYNLW 345
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
++ CA+ +++ +K L E+ + DWV Y +L N+YI L++ ++TL E EK
Sbjct: 346 LTVCASQNDVETAEKVLLEIK-KAKIDPDWVTYSSLTNLYIKKG-LLDKAATTLNEMEKR 403
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 240
+++ I Y LI L+ + +KD + +IWK L+ KM Y C++SS + LG +E
Sbjct: 404 TSRKGRIAYSSLISLHTNMQDKDGVHRIWKKLKSIFHKMNDAEYTCMISSLVKLGEFEEA 463
Query: 241 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 291
+ +W S + D N LL A+ + E A +F+ ++++ P+
Sbjct: 464 ENLYSEW-TSVSPTGDSRVPNILLAAYINKNEMEMAEKFYNQMVERGITPS 513
>gi|297737393|emb|CBI26594.3| unnamed protein product [Vitis vinifera]
Length = 529
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 102/291 (35%), Positives = 162/291 (55%), Gaps = 4/291 (1%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M + L DYA +DL+ K+ G+ S E++FE L K T TALLH Y K +
Sbjct: 114 MTKQHDIKLLAGDYAVHLDLIAKIRGLASAEKFFEDLSDKMKGQPTCTALLHTYVQNKVS 173
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
EKAE L E++ + L YN M++LY+S GQ+EKV +++E+K KN PD+ TYNLW
Sbjct: 174 EKAEALMEKMSECGFLKCPLPYNHMISLYISDGQLEKVPGMIQELK-KNTSPDVVTYNLW 232
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
++ CA+ +++ +K L E+ + DWV Y +L N+YI L++ ++TL E EK
Sbjct: 233 LTVCASQNDVETAEKVLLEIK-KAKIDPDWVTYSSLTNLYIKKG-LLDKAATTLNEMEKR 290
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 240
+++ I Y LI L+ + +KD + +IWK L+ KM Y C++SS + LG +E
Sbjct: 291 TSRKGRIAYSSLISLHTNMQDKDGVHRIWKKLKSIFHKMNDAEYTCMISSLVKLGEFEEA 350
Query: 241 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 291
+ +W S + D N LL A+ + E A +F+ ++++ P+
Sbjct: 351 ENLYSEW-TSVSPTGDSRVPNILLAAYINKNEMEMAEKFYNQMVERGITPS 400
>gi|147804811|emb|CAN64701.1| hypothetical protein VITISV_037299 [Vitis vinifera]
Length = 1111
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 102/291 (35%), Positives = 162/291 (55%), Gaps = 4/291 (1%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M + L DYA +DL+ K+ G+ S E++FE L K T TALLH Y K +
Sbjct: 114 MTKQHDIKLLAGDYAVHLDLIAKIRGLASAEKFFEDLSDKMKGQPTCTALLHTYVQNKVS 173
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
EKAE L E++ + L YN M++LY+S GQ+EKV +++E+K KN PD+ TYNLW
Sbjct: 174 EKAEALMEKMSECGFLKCPLPYNHMISLYISDGQLEKVPGMIQELK-KNTSPDVVTYNLW 232
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
++ CA+ +++ +K L E+ + DWV Y +L N+YI L++ ++TL E EK
Sbjct: 233 LTVCASQNDVETAEKVLLEIK-KAKIDPDWVTYSSLTNLYIKKG-LLDKAATTLNEMEKR 290
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 240
+++ I Y LI L+ + +KD + +IWK L+ KM Y C++SS + LG +E
Sbjct: 291 TSRKGRIAYSSLISLHTNMQDKDGVHRIWKKLKSIFHKMNDAEYTCMISSLVKLGEFEEA 350
Query: 241 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 291
+ +W S + D N LL A+ + E A +F+ ++++ P+
Sbjct: 351 ENLYSEW-TSVSPTGDSRVPNILLAAYINKNEMEMAEKFYNQMVERGITPS 400
>gi|224085447|ref|XP_002307578.1| predicted protein [Populus trichocarpa]
gi|222857027|gb|EEE94574.1| predicted protein [Populus trichocarpa]
Length = 513
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/291 (33%), Positives = 163/291 (56%), Gaps = 6/291 (2%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M + L DYA +DL+ K+ G++S E++FE +P + + +ALLH+Y K
Sbjct: 98 MTKQSDIKLVPGDYAVHLDLIAKIRGLNSAEKFFEDIPDKMRDYQACSALLHVYVQNKSI 157
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
KAE L E++ + NAL YN M+++Y++ GQ+EKVA +++E+K+K PD+ TYN+W
Sbjct: 158 SKAEALMEKMSECGFLKNALPYNHMLSVYVANGQLEKVAEIIQELKKK-TSPDVVTYNMW 216
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
+++CA+ +++ +K E+ S DWV Y L N+YI L A + TL E EK
Sbjct: 217 LTACASQNDVETAEKVFMELK-KSKLDPDWVTYSTLTNLYIKKECLEKA-AYTLKEVEKR 274
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 240
+++ +TY L+ L+A + +KD + + W ++ KM Y C++SS + LG
Sbjct: 275 ASKKNRVTYSSLLSLHANMKDKDGLHRTWNKMKSVFNKMNDAEYNCMISSLVKLGEFGGA 334
Query: 241 GEIIDQWKQ-SATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
+ ++W+ SAT D +S N +L ++ + E A F ++QK P
Sbjct: 335 ENLYNEWESVSATRDSRVS--NIVLASYINRNQMEDAENFCQRMVQKGITP 383
>gi|343172214|gb|AEL98811.1| pentatricopeptide repeat-containing protein, partial [Silene
latifolia]
Length = 359
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 98/279 (35%), Positives = 154/279 (55%), Gaps = 2/279 (0%)
Query: 12 SDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVK 71
SD A +DL+ K G+ + E YF LP S+K E Y ALL++Y +KAE L E++K
Sbjct: 21 SDQAIHLDLIGKTHGVAAAENYFIDLPESSKNIECYGALLNIYCKELIPDKAEALMEKMK 80
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
+ L A+ YN +MTLY G EKV +V+E+K +++ +TYN+W+ + AA +I
Sbjct: 81 ELGLPITAMSYNSLMTLYSKTGLPEKVPALVQEMKASDIMLQTYTYNVWMRALAAVKDIY 140
Query: 132 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 191
V++ LDEM D ++DW Y NL +IY+ + AE++ L E EK T + Y F
Sbjct: 141 GVERVLDEMKRDGRVAEDWTTYSNLASIYVESKMFEKAENA-LKELEKRNTSQDLSPYQF 199
Query: 192 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 251
L+ LY GN ++ ++W+SLR+ K + Y+ ++ + L LK + W+ S
Sbjct: 200 LLTLYGKTGNLIEVYRVWRSLRLAFPKTPNVAYLNMIQRLVTLKDLKGAEKCFADWESSC 259
Query: 252 TSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
T ++DI N L+GA+ GL ++A E ++ P
Sbjct: 260 T-NYDIRIANVLMGAYIKDGLLQQAKELKKRACKRGAKP 297
>gi|148909871|gb|ABR18022.1| unknown [Picea sitchensis]
Length = 561
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 109/290 (37%), Positives = 158/290 (54%), Gaps = 6/290 (2%)
Query: 5 KEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAE 64
K+F S D A + L+ KV GI S E+Y+ L K TY ALL+ Y K EK+E
Sbjct: 154 KKFPCSVGDRAMHLGLIAKVHGIASAEKYYVDLHHYEKNHLTYFALLNCYVQEKNIEKSE 213
Query: 65 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 124
+ E +K A Y EMMTLYM+ Q EKV LV++E+K+K + DI YN+W+ S
Sbjct: 214 AIMEELKDLGFIKTAFPYTEMMTLYMNTEQFEKVPLVIQEMKKKGISLDIHCYNIWMRSY 273
Query: 125 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI--- 181
AA ++DQV + +E+ D + DW Y L NIYI A L A S L E E +
Sbjct: 274 AALSDMDQVAEVFNEIERDDNINTDWSIYSTLANIYINAKVLDKA-GSALKEMENKMKEI 332
Query: 182 -TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 240
T++ + Y+ LI L+ LGNKD++ +IW+S + KMT+R+Y+C+LSS + +G ++
Sbjct: 333 ETKKDQLAYNHLISLHGRLGNKDEVYRIWQSFELAFPKMTNRSYVCLLSSLVGMGDIEGA 392
Query: 241 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
I +W+ T D D LL A+ + G +KA ++ K P
Sbjct: 393 EVFIKKWESMKTFD-DSRIYYALLNAYIEKGWLQKAELLLERVVDKGGKP 441
>gi|108862755|gb|ABA99305.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215704853|dbj|BAG94881.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215712260|dbj|BAG94387.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 514
Score = 174 bits (440), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 98/291 (33%), Positives = 158/291 (54%), Gaps = 4/291 (1%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M T E L D+A +DL+ KV G+ S E++FE +P AK T ALLH Y
Sbjct: 101 MRTQPEMRLLPGDHAVHLDLVAKVRGLPSAEKFFEDMPERAKGPSTCNALLHAYVQHGRR 160
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
+KAE + E + ++ AL +N MM+LYMS G++EKV +++E+ R+ +PD+ TYN+W
Sbjct: 161 DKAEAMLEEMAKAGYLTCALPFNHMMSLYMSSGELEKVPEMIKEL-RRYTIPDLVTYNIW 219
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
++ C+ ++ +K D M D DW+ + L +IYI A V + LVE EK
Sbjct: 220 LTYCSKKNSVKAAEKVYDLMK-DERVVPDWMTFSLLGSIYINAGLHVKGRDA-LVEMEKR 277
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 240
++++ Y L+ LYA L ++ +D++W+ +R T +K + Y C+L+S G + E
Sbjct: 278 ASRKERAAYSSLLTLYASLSDRGNLDRVWRKMRETFRKFSDTEYKCMLTSLTRFGDIAEA 337
Query: 241 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 291
+W +SA+ D N +L + G+ EKA F ++QK P+
Sbjct: 338 ESFYSEW-ESASGTRDSRIPNTILAFYIKNGMMEKAEGFLDHIVQKGVKPS 387
>gi|125536853|gb|EAY83341.1| hypothetical protein OsI_38557 [Oryza sativa Indica Group]
Length = 444
Score = 174 bits (440), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 98/291 (33%), Positives = 158/291 (54%), Gaps = 4/291 (1%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M T E L D+A +DL+ KV G+ S E++FE +P AK T ALLH Y
Sbjct: 31 MRTQPEMRLLPGDHAVHLDLVAKVRGLPSAEKFFEDMPERAKGPSTCNALLHAYVQHGRR 90
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
+KAE + E + ++ AL +N MM+LYMS G++EKV +++E+ R+ +PD+ TYN+W
Sbjct: 91 DKAEAMLEEMAKAGYLTCALPFNHMMSLYMSSGELEKVPEMIKEL-RRYTIPDLVTYNIW 149
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
++ C+ ++ +K D M D DW+ + L +IYI A V + LVE EK
Sbjct: 150 LTYCSKKNSVKAAEKVYDLMK-DERVVPDWMTFSLLGSIYINAGLHVKGRDA-LVEMEKR 207
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 240
++++ Y L+ LYA L ++ +D++W+ +R T +K + Y C+L+S G + E
Sbjct: 208 ASRKERAAYSSLLTLYASLSDRGNLDRVWRKMRETFRKFSDTEYKCMLTSLTRFGDIAEA 267
Query: 241 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 291
+W +SA+ D N +L + G+ EKA F ++QK P+
Sbjct: 268 ESFYSEW-ESASGTRDSRIPNTILAFYIKNGMMEKAEGFLDHIVQKGVKPS 317
>gi|449470082|ref|XP_004152747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Cucumis sativus]
Length = 439
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 153/290 (52%), Gaps = 2/290 (0%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M T F + +++A R++L K G+ E YF LP A + LLH Y + T
Sbjct: 118 METRDNFRMYPAEHALRLELTIKAHGLLKAEEYFNQLPTIASQKASSLPLLHGYVKERNT 177
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
EKAE +++ S L N +YNEMM LY++ Q EKV LV++++K+ + ++ +YNLW
Sbjct: 178 EKAEAFMVKLRDSGLVVNHHLYNEMMKLYVATYQNEKVPLVIKDMKQNQIPRNVLSYNLW 237
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
+++C+ + ++ +EM D W L N+YI LV + L EAEK
Sbjct: 238 MNACSELYGVGSIELVFEEMLTDKNVQVGWSTMCTLANVYIQEG-LVEKAFAALKEAEKK 296
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 240
++ + + Y FLI LYA L +K+ + ++W++ + T NYICIL + LG + +
Sbjct: 297 LSPCKRLGYFFLITLYASLKDKEGVFRVWRASKAVSGNPTCANYICILLCLVKLGEIDKA 356
Query: 241 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
++ +W+ + ++DI N LLGA+ GL EKA H L + P
Sbjct: 357 EKVFKEWELNC-RNYDIRVSNVLLGAYVRNGLLEKAESLHRHTLGRGGNP 405
>gi|343172216|gb|AEL98812.1| pentatricopeptide repeat-containing protein, partial [Silene
latifolia]
Length = 359
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 97/279 (34%), Positives = 154/279 (55%), Gaps = 2/279 (0%)
Query: 12 SDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVK 71
+D A +DL+ K G+ + E YF LP S+K E Y ALL++Y +KAE L E++K
Sbjct: 21 NDQAIHLDLIGKTHGVAAAENYFIDLPESSKNIECYGALLNIYCKELIPDKAEALMEKMK 80
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
+ L A+ YN +MTLY G EKV +V+E+K +++ +TYN+W+ + AA +I
Sbjct: 81 ELGLPITAMSYNSLMTLYSKTGLPEKVPALVQEMKASDIMLQTYTYNVWMRALAAVKDIY 140
Query: 132 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 191
V++ LDEM D ++DW Y NL +IY+ + AE++ L E EK T R+ Y F
Sbjct: 141 GVERVLDEMKRDGRVAEDWTTYSNLASIYVESKMFDKAENA-LKELEKRNTSRELSPYQF 199
Query: 192 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 251
L+ LY GN ++ ++W+SLR+ K + Y+ ++ + L LK + W+ S
Sbjct: 200 LLTLYGKTGNLIEVYRLWRSLRLAFPKTPNVAYLNMIQRLVTLKDLKGAEKCFADWESSC 259
Query: 252 TSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
T ++DI N L+GA+ G ++A E ++ P
Sbjct: 260 T-NYDIRIANVLMGAYIKDGSLQQAKELKKRACKRGAKP 297
>gi|326493098|dbj|BAJ85010.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510377|dbj|BAJ87405.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 505
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 97/284 (34%), Positives = 158/284 (55%), Gaps = 2/284 (0%)
Query: 7 FVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEEL 66
F LS SD A ++DL+ KV G+ E YFE LP K TY +LL++YA A+ EK E
Sbjct: 132 FSLSSSDMAIQLDLIAKVRGVPDAEEYFEKLPDPLKDKRTYGSLLNVYAQARMKEKTEYT 191
Query: 67 FERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAA 126
FE++++ + + L +N +M Y+ V + EKV+ V +E+K++N+ D+ TYN+WI CAA
Sbjct: 192 FEQMRKKGFATDTLPFNVLMNFYVDVAEPEKVSTVTDEMKQRNISFDVCTYNIWIKCCAA 251
Query: 127 TLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQW 186
+ D +++ L++M+ D +W Y L +++I + AE L EAEK T R
Sbjct: 252 MKDADAMERVLNQMTADESVVANWTTYTTLASMHIKLENFEKAEEC-LKEAEKRATGRDK 310
Query: 187 ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 246
+ FLI LY+ L K+++ +IW + T + + + Y +LS+ + LG ++ + ++
Sbjct: 311 KCFHFLITLYSHLQKKEEVYRIWNWYKATFKTIHNLGYQEVLSALVRLGDIEGAELLYEE 370
Query: 247 WKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
W S +S FD N LL +S G KA + ++K P
Sbjct: 371 W-ASKSSSFDPKTMNILLAWYSREGFVVKAQQTLNRFVEKGGNP 413
>gi|357440753|ref|XP_003590654.1| WD repeat-containing protein [Medicago truncatula]
gi|355479702|gb|AES60905.1| WD repeat-containing protein [Medicago truncatula]
Length = 562
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 97/289 (33%), Positives = 162/289 (56%), Gaps = 6/289 (2%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M + L + DYA ++DL+TKV G++S E++FE LP + T TALLH Y T
Sbjct: 95 MKLQNDIKLVEGDYAVQLDLITKVRGLNSAEKFFEDLPDKMRGQPTCTALLHAYVQNNLT 154
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
KAE L ++ + + + YN MM+LY+S G++EKV + EE+K N PD+ T+NL
Sbjct: 155 NKAEALMSKMSECGFLRSPVPYNRMMSLYISNGKLEKVPKLFEELK-VNTSPDVVTFNLL 213
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI---TASHLVNAESSTLVEA 177
+++CA+ +++ ++ L ++ + DWV Y L N+YI + + +STL E
Sbjct: 214 LTACASENDVETAERVLLQLK-KAKVDPDWVTYSTLTNLYIRNASVDDCLEKAASTLKEM 272
Query: 178 EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHL 237
EK ++ + Y L+ L+A +GN D++++IW ++ KM+ Y+C++SS + LG
Sbjct: 273 EKRTSRETRVAYSSLLSLHANMGNVDEVNRIWGKMKACFCKMSDDEYVCMISSLVKLGDF 332
Query: 238 KEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 286
V + +W +S + D+ N LL ++ D G E A F L++K
Sbjct: 333 AGVENLYKEW-ESVSGTNDVRVSNLLLTSYVDQGQMEMAEIFCNQLVEK 380
>gi|449515498|ref|XP_004164786.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Cucumis sativus]
Length = 439
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 97/291 (33%), Positives = 156/291 (53%), Gaps = 4/291 (1%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M T F + +++A R++L K G+ E YF LP A + LLH Y + T
Sbjct: 118 METRDNFRMYPAEHALRLELTIKAHGLLKAEEYFNQLPTIASQKASSLPLLHGYVKERNT 177
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVP-DIFTYNL 119
EKAE +++ S L N +YNEMM LY++ Q EKV LV++++K +N++P ++ +YNL
Sbjct: 178 EKAEAFMVKLRDSGLVVNHHLYNEMMKLYVATYQNEKVPLVIKDMK-QNLIPRNVLSYNL 236
Query: 120 WISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK 179
W+++C+ + ++ +EM D W L N+YI LV + L EAEK
Sbjct: 237 WMNACSELYGVGSIELVFEEMLTDKNVQVGWSTMCTLANVYIQEG-LVEKAFAALKEAEK 295
Query: 180 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 239
++ + + Y FLI LYA L +K+ + ++W++ + T NYICIL + LG + +
Sbjct: 296 KLSPCKRLGYFFLITLYASLKDKEGVFRVWRASKAVSGNPTCANYICILLCLVKLGEIDK 355
Query: 240 VGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
++ +W+ + ++DI N LLGA+ GL EKA H L + P
Sbjct: 356 AEKVFKEWELNC-RNYDIRVSNVLLGAYVRNGLLEKAESLHRHTLGRGGNP 405
>gi|326498623|dbj|BAK02297.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 505
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 97/284 (34%), Positives = 158/284 (55%), Gaps = 2/284 (0%)
Query: 7 FVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEEL 66
F LS SD A ++DL+ KV G+ E YFE LP K TY +LL++YA A+ EK E
Sbjct: 132 FSLSSSDMAIQLDLIAKVRGVPDTEEYFEKLPDPLKDKRTYGSLLNVYAQARMKEKTEYT 191
Query: 67 FERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAA 126
FE++++ + + L +N +M Y+ V + EKV+ V +E+K++N+ D+ TYN+WI CAA
Sbjct: 192 FEQMRKKGFATDTLPFNVLMNFYVDVAEPEKVSTVTDEMKQRNISFDVCTYNIWIKCCAA 251
Query: 127 TLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQW 186
+ D +++ L++M+ D +W Y L +++I + AE L EAEK T R
Sbjct: 252 MKDADAMERVLNQMTADESVVANWTTYTTLASMHIKLENFEKAEEC-LKEAEKRATGRDK 310
Query: 187 ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 246
+ FLI LY+ L K+++ +IW + T + + + Y +LS+ + LG ++ + ++
Sbjct: 311 KCFHFLITLYSHLQKKEEVYRIWNWYKATFKTIHNLGYQEVLSALVRLGDIEGAELLYEE 370
Query: 247 WKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
W S +S FD N LL +S G KA + ++K P
Sbjct: 371 W-ASKSSSFDPKTMNILLAWYSREGFVVKAQQTLNRFVEKGGNP 413
>gi|255545872|ref|XP_002513996.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547082|gb|EEF48579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 496
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 101/292 (34%), Positives = 154/292 (52%), Gaps = 3/292 (1%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYT-ALLHLYAGAKW 59
M T K F +S SDYA R++L+ KV GI E YF +P + T + + ALLH Y K
Sbjct: 87 METQKNFRMSVSDYALRLELIIKVNGIEEAEEYFNFIPHDSVTRKAASFALLHGYVKVKD 146
Query: 60 TEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNL 119
KAE L ++ L N +NEMM LYM+ Q EKVALV++++KR + ++ +YNL
Sbjct: 147 VVKAEALMMKLYNLGLIVNCYPFNEMMKLYMATSQYEKVALVIDQMKRNKIALNLLSYNL 206
Query: 120 WISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK 179
W+SS + +V+ EM D W L NIY T + +V+ L AEK
Sbjct: 207 WMSSYGEVSKVVKVELVYKEMVNDDNVEVGWSTLATLANIY-TKAGIVDKALLALKNAEK 265
Query: 180 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 239
++ + Y FL+ Y+ L NK+ + ++W++ + ++T NY+C+LS + +G L E
Sbjct: 266 ILSTSHLLGYFFLMTQYSSLKNKEGVQRLWEACKGVNGRITCANYMCVLSCLVKVGDLLE 325
Query: 240 VGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 291
++ W+ + +DI N LLGA+ GL KA H+ L + P
Sbjct: 326 AEKVFRDWELNCRK-YDIRVSNVLLGAYVRKGLMNKAESLHLHTLDRGGCPN 376
>gi|326505170|dbj|BAK02972.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 510
Score = 170 bits (431), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 97/292 (33%), Positives = 157/292 (53%), Gaps = 6/292 (2%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M T E L D+A +DL+ KV G+ S E++FE +P AK T +LLH Y
Sbjct: 96 MRTQPEIRLLPGDHAVHLDLVAKVRGLASAEKFFEDVPERAKGPSTCNSLLHAYVQHGAR 155
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
+KAE + + + + AL +N MM+LYMSVG++EKV +++E+ R+ +PD+ TYN+W
Sbjct: 156 DKAEAMLKEMADAGYLTCALPFNHMMSLYMSVGELEKVPEMIKEL-RRYTIPDLVTYNIW 214
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
++ C+ ++ +K D M D DW+ + L +IYI A V + LVE EK
Sbjct: 215 LTYCSRKNSVKSAEKVFDLMK-DDRVVPDWMTFSLLASIYINAGLHVKGRDA-LVEMEKR 272
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 240
++++ Y L+ +YA L ++ +D++W +R T +K + Y C+L+S G +
Sbjct: 273 ASRKERAAYSSLLTMYASLSDRGNLDRVWSKMRQTFRKFSDAEYKCMLTSLTRFGDIAAA 332
Query: 241 GEIIDQWK-QSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 291
+ +W+ QS T D I N +L + G EKA F ++QK P+
Sbjct: 333 EFVYGEWESQSGTKDSRIP--NTILSFYIKNGEMEKAESFLQYIVQKGVKPS 382
>gi|413953409|gb|AFW86058.1| hypothetical protein ZEAMMB73_674343 [Zea mays]
Length = 626
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 88/237 (37%), Positives = 138/237 (58%), Gaps = 1/237 (0%)
Query: 12 SDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVK 71
SD A R+DL+ K GI + E+YF LP ++KT TY ALL+ Y TEKAE L E++K
Sbjct: 177 SDQAIRLDLIAKSRGIAAAEKYFLDLPETSKTHLTYGALLNSYCKELMTEKAESLMEKMK 236
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
+ N +F A+ +N +MT+Y V Q EKV +++++K +V+PD+FTYN+W+ + AA +I
Sbjct: 237 ELNFAFTAMSFNSLMTMYTKVNQAEKVPSIIQDMKADDVLPDVFTYNVWMRALAALKDIP 296
Query: 132 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 191
V++ ++EM D + DW Y NL +IY+ A AE++ L E EK T Y F
Sbjct: 297 GVERVIEEMKRDGRVAPDWTTYSNLASIYVEAGMFEKAEAA-LKELEKRNTSNDIEAYQF 355
Query: 192 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK 248
LI LY N ++ ++W+SL+ +M + +Y+ ++ L L +W+
Sbjct: 356 LITLYGRTQNLVEVHRVWRSLKRDNPRMANMSYLNMIQVLANLKDLSAAEACFKEWE 412
>gi|413953408|gb|AFW86057.1| hypothetical protein ZEAMMB73_674343 [Zea mays]
Length = 596
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 88/237 (37%), Positives = 138/237 (58%), Gaps = 1/237 (0%)
Query: 12 SDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVK 71
SD A R+DL+ K GI + E+YF LP ++KT TY ALL+ Y TEKAE L E++K
Sbjct: 147 SDQAIRLDLIAKSRGIAAAEKYFLDLPETSKTHLTYGALLNSYCKELMTEKAESLMEKMK 206
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
+ N +F A+ +N +MT+Y V Q EKV +++++K +V+PD+FTYN+W+ + AA +I
Sbjct: 207 ELNFAFTAMSFNSLMTMYTKVNQAEKVPSIIQDMKADDVLPDVFTYNVWMRALAALKDIP 266
Query: 132 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 191
V++ ++EM D + DW Y NL +IY+ A AE++ L E EK T Y F
Sbjct: 267 GVERVIEEMKRDGRVAPDWTTYSNLASIYVEAGMFEKAEAA-LKELEKRNTSNDIEAYQF 325
Query: 192 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK 248
LI LY N ++ ++W+SL+ +M + +Y+ ++ L L +W+
Sbjct: 326 LITLYGRTQNLVEVHRVWRSLKRDNPRMANMSYLNMIQVLANLKDLSAAEACFKEWE 382
>gi|293336604|ref|NP_001168600.1| uncharacterized protein LOC100382384 [Zea mays]
gi|223949449|gb|ACN28808.1| unknown [Zea mays]
Length = 536
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 88/237 (37%), Positives = 138/237 (58%), Gaps = 1/237 (0%)
Query: 12 SDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVK 71
SD A R+DL+ K GI + E+YF LP ++KT TY ALL+ Y TEKAE L E++K
Sbjct: 87 SDQAIRLDLIAKSRGIAAAEKYFLDLPETSKTHLTYGALLNSYCKELMTEKAESLMEKMK 146
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
+ N +F A+ +N +MT+Y V Q EKV +++++K +V+PD+FTYN+W+ + AA +I
Sbjct: 147 ELNFAFTAMSFNSLMTMYTKVNQAEKVPSIIQDMKADDVLPDVFTYNVWMRALAALKDIP 206
Query: 132 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 191
V++ ++EM D + DW Y NL +IY+ A AE++ L E EK T Y F
Sbjct: 207 GVERVIEEMKRDGRVAPDWTTYSNLASIYVEAGMFEKAEAA-LKELEKRNTSNDIEAYQF 265
Query: 192 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK 248
LI LY N ++ ++W+SL+ +M + +Y+ ++ L L +W+
Sbjct: 266 LITLYGRTQNLVEVHRVWRSLKRDNPRMANMSYLNMIQVLANLKDLSAAEACFKEWE 322
>gi|302142021|emb|CBI19224.3| unnamed protein product [Vitis vinifera]
Length = 560
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 151/290 (52%), Gaps = 2/290 (0%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M F +S +D+A R++L+ K+ + E YFE LP S+ LLH Y +
Sbjct: 96 MEAQNRFQMSAADHAIRLELIIKIQSLAEAEEYFEHLPNSSSRKAACLPLLHAYVKERAI 155
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
EKAE L ++ L+ + +NEMM LYM+ Q E+V V+ ++K+ + ++ +YNLW
Sbjct: 156 EKAEALMLKLNDLGLTVSPHPFNEMMKLYMATSQFERVPTVILQMKQNKIPLNVLSYNLW 215
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
+S+C+ + + +M D W L NIY+ S L+ + L AEK
Sbjct: 216 MSACSEVSGLASAEMVYKDMVDDKNVEVGWSTLSTLANIYLK-SGLIKKANLALKNAEKK 274
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 240
++ + Y FLI +YA L NK+++ ++W++ + ++TS NY+CIL + LG + E
Sbjct: 275 LSAHNRLGYFFLITMYASLSNKEEVLRLWEASKKVGGRITSTNYMCILLCLVKLGDIAEA 334
Query: 241 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
I +W +S +DI N LLGA+ G +KA H+ L++ P
Sbjct: 335 ERIFREW-ESKCWKYDIRVSNVLLGAYMRTGSMDKAESLHLHTLERGGCP 383
>gi|255559466|ref|XP_002520753.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540138|gb|EEF41715.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 551
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 98/290 (33%), Positives = 156/290 (53%), Gaps = 4/290 (1%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M +E L DYA +DL+ KV G+ S E++FE LP + +T TALLH Y K
Sbjct: 94 MTQERELKLLPGDYAVHLDLVAKVRGLTSAEKFFEDLPDEMRGWQTCTALLHTYVKCKDV 153
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
KAE L E+++ + N L YN M++LY++ G+ +K +VEE+K K+ PD+ T+NLW
Sbjct: 154 VKAEALMEKMRDCSFVKNPLPYNHMISLYIADGEFDKAKRIVEELK-KSTTPDVVTFNLW 212
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
+S C A+LN + K + DW+ Y L N+Y+ L +A STL E EK
Sbjct: 213 LSMC-ASLNDVESAKKVLLELKKLKIEADWITYSTLTNLYLKNKLLEDA-VSTLKEMEKR 270
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 240
+++ + Y L+ LY +G+KD + +IW ++ KM Y C+LSS + L +++
Sbjct: 271 ASRKNRLAYSSLLSLYTNMGDKDAVHRIWNKMKSLFCKMNDAEYTCMLSSLIKLEEIEKA 330
Query: 241 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
+ +W +S + D N LL A+ + E + F+ +++K P
Sbjct: 331 ENLYTEW-ESVSGTGDPQVANILLAAYINRNQIEDSENFYRRMVEKGVCP 379
>gi|115457716|ref|NP_001052458.1| Os04g0320200 [Oryza sativa Japonica Group]
gi|32490390|emb|CAE04700.1| OSJNBa0041M06.2 [Oryza sativa Japonica Group]
gi|38344779|emb|CAE01505.2| OSJNBb0026L04.10 [Oryza sativa Japonica Group]
gi|113564029|dbj|BAF14372.1| Os04g0320200 [Oryza sativa Japonica Group]
gi|125543501|gb|EAY89640.1| hypothetical protein OsI_11170 [Oryza sativa Indica Group]
gi|125589896|gb|EAZ30246.1| hypothetical protein OsJ_14297 [Oryza sativa Japonica Group]
gi|215767374|dbj|BAG99602.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 524
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 90/237 (37%), Positives = 140/237 (59%), Gaps = 1/237 (0%)
Query: 12 SDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVK 71
SD A R+DL+ K GI + E+YF LP ++KT TY ALL+ Y TEKAE L ++K
Sbjct: 87 SDQAIRLDLVAKSRGIAAAEKYFLDLPETSKTHLTYGALLNCYCKDLMTEKAEALMGKMK 146
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
+ N +F A+ YN +MTLY V Q EKV V++++K +V+PDI+TYN+W+ + AA ++I
Sbjct: 147 ELNFAFTAMCYNSLMTLYTKVNQHEKVPSVIQDMKADDVLPDIYTYNVWMRALAARVDIK 206
Query: 132 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 191
V++ ++EM D + DW Y NL +IY+ A AE++ L E EK T Y F
Sbjct: 207 GVERVIEEMKRDGRVTPDWTTYSNLASIYVDAGLFEKAEAA-LKELEKWNTSNDLEAYQF 265
Query: 192 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK 248
LI LYA N ++ ++W+SL+ + + + +Y+ ++ + L L +W+
Sbjct: 266 LITLYARTQNLVEVHRVWRSLKRNQPRRANMSYLNMIQALANLKDLPGAEACFKEWE 322
>gi|225459164|ref|XP_002283946.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Vitis vinifera]
Length = 475
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 151/290 (52%), Gaps = 2/290 (0%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M F +S +D+A R++L+ K+ + E YFE LP S+ LLH Y +
Sbjct: 69 MEAQNRFQMSAADHAIRLELIIKIQSLAEAEEYFEHLPNSSSRKAACLPLLHAYVKERAI 128
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
EKAE L ++ L+ + +NEMM LYM+ Q E+V V+ ++K+ + ++ +YNLW
Sbjct: 129 EKAEALMLKLNDLGLTVSPHPFNEMMKLYMATSQFERVPTVILQMKQNKIPLNVLSYNLW 188
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
+S+C+ + + +M D W L NIY+ S L+ + L AEK
Sbjct: 189 MSACSEVSGLASAEMVYKDMVDDKNVEVGWSTLSTLANIYLK-SGLIKKANLALKNAEKK 247
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 240
++ + Y FLI +YA L NK+++ ++W++ + ++TS NY+CIL + LG + E
Sbjct: 248 LSAHNRLGYFFLITMYASLSNKEEVLRLWEASKKVGGRITSTNYMCILLCLVKLGDIAEA 307
Query: 241 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
I +W +S +DI N LLGA+ G +KA H+ L++ P
Sbjct: 308 ERIFREW-ESKCWKYDIRVSNVLLGAYMRTGSMDKAESLHLHTLERGGCP 356
>gi|116309055|emb|CAH66166.1| H0107B07.5 [Oryza sativa Indica Group]
Length = 524
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 90/237 (37%), Positives = 140/237 (59%), Gaps = 1/237 (0%)
Query: 12 SDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVK 71
SD A R+DL+ K GI + E+YF LP ++KT TY ALL+ Y TEKAE L ++K
Sbjct: 87 SDQAIRLDLVAKSRGIAAAEKYFLDLPETSKTHLTYGALLNCYCKDLMTEKAEALMGKMK 146
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
+ N +F A+ YN +MTLY V Q EKV V++++K +V+PDI+TYN+W+ + AA ++I
Sbjct: 147 ELNFAFTAMCYNSLMTLYTKVNQHEKVPSVIQDMKADDVLPDIYTYNVWMRALAARVDIK 206
Query: 132 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 191
V++ ++EM D + DW Y NL +IY+ A AE++ L E EK T Y F
Sbjct: 207 GVERVIEEMKRDGRVTPDWTTYSNLASIYVDAGLFEKAEAA-LKELEKWNTSNDLEAYQF 265
Query: 192 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK 248
LI LYA N ++ ++W+SL+ + + + +Y+ ++ + L L +W+
Sbjct: 266 LITLYARTQNLVEVHRVWRSLKRNQPRRANMSYLNMIQALANLKDLPGAEACFKEWE 322
>gi|357110627|ref|XP_003557118.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g60770-like [Brachypodium distachyon]
Length = 536
Score = 166 bits (421), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 88/236 (37%), Positives = 134/236 (56%), Gaps = 1/236 (0%)
Query: 13 DYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQ 72
D A R+DL+ K GI + E+YF LP ++KT TY ALL+ Y TEKAE L E++K+
Sbjct: 88 DQAIRLDLVAKSRGIAAAEKYFMDLPETSKTHLTYGALLNCYCKESMTEKAEALMEKMKE 147
Query: 73 SNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQ 132
N +F A+ YN +MTLY V Q EKV +++++K +V+PD++TYN+W+ S AA +I
Sbjct: 148 LNFAFTAMSYNSLMTLYTKVNQPEKVPSIIQDMKADDVLPDVYTYNVWMRSLAARQDISG 207
Query: 133 VKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFL 192
V++ ++EM D DW Y NL +IY+ A AE++ L E EK T Y FL
Sbjct: 208 VERVIEEMKRDGRVVPDWTTYSNLASIYVEAGLFEKAEAA-LKELEKRNTSNDLEAYQFL 266
Query: 193 IILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK 248
I LY N ++ +W+SL+ + + +Y+ ++ L L +W+
Sbjct: 267 ITLYGRTQNLVEVHHVWRSLKRNNPRKANMSYLNMIQVLANLKDLPAAEACFKEWE 322
>gi|125591164|gb|EAZ31514.1| hypothetical protein OsJ_15655 [Oryza sativa Japonica Group]
Length = 531
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 157/284 (55%), Gaps = 2/284 (0%)
Query: 7 FVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEEL 66
F LS SD A ++DL+ KV G+ E YFE LP K TY +LL++YA A EK E
Sbjct: 160 FSLSSSDMAIQLDLIAKVRGVSHAEEYFEELPDPLKDKRTYGSLLNVYAQAMMKEKTEST 219
Query: 67 FERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAA 126
FE++++ + + L +N +M Y+ + EKV+++++E+ +NV D+ TYN+WI SCAA
Sbjct: 220 FEQMRKKGFATDTLPFNVLMNFYVDAEEAEKVSILIDEMMERNVAFDVCTYNIWIKSCAA 279
Query: 127 TLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQW 186
+ D +++ ++M D +W Y L +++I + AE S L EAEK T R+
Sbjct: 280 MQDADAMEQVFNQMIRDETVVANWTTYTTLASMHIKLGNSEKAEES-LKEAEKRTTGREK 338
Query: 187 ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 246
+ +L+ LY+ LG K+++ ++W + T + + Y +LS+ + LG ++ + ++
Sbjct: 339 KCFHYLMTLYSHLGKKEEVYRVWNWYKATFPTIHNLGYQEVLSALVRLGDIEGAELLYEE 398
Query: 247 WKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
W S +S FD N LL ++ G KA + ++K P
Sbjct: 399 W-ASKSSSFDPKTMNILLAWYAREGFVTKAEQTLNRFVEKGGNP 441
>gi|125549215|gb|EAY95037.1| hypothetical protein OsI_16851 [Oryza sativa Indica Group]
Length = 511
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 157/284 (55%), Gaps = 2/284 (0%)
Query: 7 FVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEEL 66
F LS SD A ++DL+ KV G+ E YFE LP K TY +LL++YA A EK E
Sbjct: 140 FSLSSSDMAIQLDLIAKVRGVSHAEEYFEELPDPLKDKRTYGSLLNVYAQAMMKEKTEST 199
Query: 67 FERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAA 126
FE++++ + + L +N +M Y+ + EKV+++++E+ +NV D+ TYN+WI SCAA
Sbjct: 200 FEQMRKKGFATDTLPFNVLMNFYVDAEEAEKVSILIDEMMERNVAFDVCTYNIWIKSCAA 259
Query: 127 TLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQW 186
+ D +++ ++M D +W Y L +++I + AE S L EAEK T R+
Sbjct: 260 MQDADAMEQVFNQMIRDETVVANWTTYTTLASMHIKLGNSEKAEES-LKEAEKRTTGREK 318
Query: 187 ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 246
+ +L+ LY+ LG K+++ ++W + T + + Y +LS+ + LG ++ + ++
Sbjct: 319 KCFHYLMTLYSHLGKKEEVYRVWNWYKATFPTIHNLGYQEVLSALVRLGDIEGAELLYEE 378
Query: 247 WKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
W S +S FD N LL ++ G KA + ++K P
Sbjct: 379 W-ASKSSSFDPKTMNILLAWYAREGFVTKAEQTLNRFVEKGGNP 421
>gi|32488964|emb|CAE04345.1| OSJNBb0038F03.9 [Oryza sativa Japonica Group]
Length = 511
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 157/284 (55%), Gaps = 2/284 (0%)
Query: 7 FVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEEL 66
F LS SD A ++DL+ KV G+ E YFE LP K TY +LL++YA A EK E
Sbjct: 140 FSLSSSDMAIQLDLIAKVRGVSHAEEYFEELPDPLKDKRTYGSLLNVYAQAMMKEKTEST 199
Query: 67 FERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAA 126
FE++++ + + L +N +M Y+ + EKV+++++E+ +NV D+ TYN+WI SCAA
Sbjct: 200 FEQMRKKGFATDTLPFNVLMNFYVDAEEAEKVSILIDEMMERNVAFDVCTYNIWIKSCAA 259
Query: 127 TLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQW 186
+ D +++ ++M D +W Y L +++I + AE S L EAEK T R+
Sbjct: 260 MQDADAMEQVFNQMIRDETVVANWTTYTTLASMHIKLGNSEKAEES-LKEAEKRTTGREK 318
Query: 187 ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 246
+ +L+ LY+ LG K+++ ++W + T + + Y +LS+ + LG ++ + ++
Sbjct: 319 KCFHYLMTLYSHLGKKEEVYRVWNWYKATFPTIHNLGYQEVLSALVRLGDIEGAELLYEE 378
Query: 247 WKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
W S +S FD N LL ++ G KA + ++K P
Sbjct: 379 W-ASKSSSFDPKTMNILLAWYAREGFVTKAEQTLNRFVEKGGNP 421
>gi|225450579|ref|XP_002277733.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
mitochondrial [Vitis vinifera]
gi|296089781|emb|CBI39600.3| unnamed protein product [Vitis vinifera]
Length = 498
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/269 (35%), Positives = 159/269 (59%), Gaps = 3/269 (1%)
Query: 9 LSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFE 68
L+++D A RIDL+ K GI E YF L SAKT++TY ALL+ Y +KA ELF+
Sbjct: 98 LNNADRAIRIDLLAKTEGIAQAENYFNSLQESAKTNKTYGALLNCYCKENMLDKAVELFK 157
Query: 69 RVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATL 128
++K+ N +AL YN M++LY+ VGQ EKV +V E++ K++ D++TYNL ++S A+
Sbjct: 158 KLKELNFVSSALSYNNMISLYLRVGQPEKVPSLVHEMEEKDIPADLYTYNLLMNSYASVK 217
Query: 129 NIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWIT 188
+ + V++ LD+M G DW Y NL NIY+ A H A + L + E++
Sbjct: 218 DFEAVEQVLDKMK-KRGVERDWFTYGNLANIYVDAGHTKKA-NYALQKLEQNKNLHDPEA 275
Query: 189 YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK 248
+ LI LYA N + +++ W+SL++ K+ +++Y+ +L + LG + + + +W
Sbjct: 276 FRMLINLYARTSNLEGVNRAWESLKLAHPKINNKSYLIMLLALSKLGDVAGLEKCFKEW- 334
Query: 249 QSATSDFDISACNRLLGAFSDVGLTEKAN 277
+S S +D+ N +L ++ + + E+AN
Sbjct: 335 ESGCSTYDVRLSNVMLESYLNREIIEEAN 363
>gi|297603118|ref|NP_001053460.2| Os04g0544400 [Oryza sativa Japonica Group]
gi|255675659|dbj|BAF15374.2| Os04g0544400 [Oryza sativa Japonica Group]
Length = 571
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 157/284 (55%), Gaps = 2/284 (0%)
Query: 7 FVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEEL 66
F LS SD A ++DL+ KV G+ E YFE LP K TY +LL++YA A EK E
Sbjct: 140 FSLSSSDMAIQLDLIAKVRGVSHAEEYFEELPDPLKDKRTYGSLLNVYAQAMMKEKTEST 199
Query: 67 FERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAA 126
FE++++ + + L +N +M Y+ + EKV+++++E+ +NV D+ TYN+WI SCAA
Sbjct: 200 FEQMRKKGFATDTLPFNVLMNFYVDAEEAEKVSILIDEMMERNVAFDVCTYNIWIKSCAA 259
Query: 127 TLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQW 186
+ D +++ ++M D +W Y L +++I + AE S L EAEK T R+
Sbjct: 260 MQDADAMEQVFNQMIRDETVVANWTTYTTLASMHIKLGNSEKAEES-LKEAEKRTTGREK 318
Query: 187 ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 246
+ +L+ LY+ LG K+++ ++W + T + + Y +LS+ + LG ++ + ++
Sbjct: 319 KCFHYLMTLYSHLGKKEEVYRVWNWYKATFPTIHNLGYQEVLSALVRLGDIEGAELLYEE 378
Query: 247 WKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
W S +S FD N LL ++ G KA + ++K P
Sbjct: 379 W-ASKSSSFDPKTMNILLAWYAREGFVTKAEQTLNRFVEKGGNP 421
>gi|356526773|ref|XP_003531991.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g60770-like [Glycine max]
Length = 490
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/289 (32%), Positives = 154/289 (53%), Gaps = 2/289 (0%)
Query: 2 VTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTE 61
+ + + + SD+A +DL+ K GI + E YF LP +K Y ALL+ Y TE
Sbjct: 81 MAKRNMIKTVSDHAIHLDLLAKARGITAAENYFVSLPEPSKNHLCYGALLNCYCKELMTE 140
Query: 62 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 121
K+E L E++K+ +L +++ YN +MTLY VGQ EK+ +++E+K NV+ D +TYN+W+
Sbjct: 141 KSEGLMEKMKELSLPLSSMPYNSLMTLYTKVGQPEKIPSLIQEMKASNVMLDSYTYNVWM 200
Query: 122 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI 181
+ AA +I V++ DEM + DW Y NL +I++ A AE + L E EK
Sbjct: 201 RALAAVNDISGVERVHDEMKRGGQVTGDWTTYSNLASIFVDAGLFDKAEVA-LKELEKRN 259
Query: 182 TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVG 241
+ Y FLI LY GN ++ ++W+SLR+ K + +Y+ ++ + L L
Sbjct: 260 AFKDLTAYQFLITLYGRTGNLYEVYRVWRSLRLAFPKTANISYLNMIQVLVNLKDLPGAE 319
Query: 242 EIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
+ +W + +DI N L+ A+ + + EKA E ++ P
Sbjct: 320 KCFREW-ECGCPTYDIRVANVLIRAYVKLDMLEKAEELKERARRRGAKP 367
>gi|147819856|emb|CAN71816.1| hypothetical protein VITISV_023421 [Vitis vinifera]
Length = 494
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 94/269 (34%), Positives = 159/269 (59%), Gaps = 3/269 (1%)
Query: 9 LSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFE 68
L+++D A RIDL+ K GI E YF L SAKT++TY ALL+ Y +KA ELF+
Sbjct: 94 LNNADRAIRIDLLAKTEGIAQAENYFNSLQESAKTNKTYGALLNCYCKENMVDKAVELFK 153
Query: 69 RVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATL 128
++K+ N +AL YN M++LY+ VGQ EKV +V E++ K++ D++TYNL ++S A+
Sbjct: 154 KLKELNFVSSALSYNNMISLYLRVGQPEKVPSLVHEMEEKDIPADLYTYNLLMNSYASVK 213
Query: 129 NIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWIT 188
+ + V++ L++M G DW Y NL NIY+ A H A + L + E++
Sbjct: 214 DFEAVEQVLEKMK-KRGVERDWFTYGNLANIYVDAGHTKKA-NYALQKLEQNKNLHDPEA 271
Query: 189 YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK 248
+ LI LYA N + +++ W+SL++ K+ +++Y+ +L + LG + + + +W
Sbjct: 272 FRMLINLYARTSNLEGVNRAWESLKLAHPKINNKSYLIMLLALSKLGDVAGLEKCFKEW- 330
Query: 249 QSATSDFDISACNRLLGAFSDVGLTEKAN 277
+S S +D+ N +L ++ + + E+AN
Sbjct: 331 ESGCSTYDVRLSNVMLESYLNREMIEEAN 359
>gi|297814019|ref|XP_002874893.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297320730|gb|EFH51152.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 525
Score = 164 bits (414), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 168/291 (57%), Gaps = 4/291 (1%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
MV ++ L DYA +DL++K+ G++S E++FE LP + T+LLH Y K +
Sbjct: 112 MVLQEDIKLQAGDYAVHLDLISKIRGLNSAEKFFEDLPDQMRGHAACTSLLHSYVQNKLS 171
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
+KAE LFE++ + + L YN M+++++S GQ EKV+++++E+K K PDI TYNLW
Sbjct: 172 DKAEALFEKMGECGFLKSCLPYNHMLSMFISKGQFEKVSVLIKELKMK-TSPDIVTYNLW 230
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
+++ A+ +++ +K + +S + DWV Y L N+Y +L A+ + L E EK
Sbjct: 231 LTAFASGNDVEGAEKVYLKAK-ESKLNPDWVTYSVLTNLYAKTDNLEKAKLA-LKEMEKL 288
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 240
++++ + Y LI L+A LG+KD ++ WK +R + +KM Y+ ++S+ + LG ++
Sbjct: 289 VSKKNRVAYASLISLHANLGDKDGVNLTWKKVRSSFKKMNDAEYLSMISAVVKLGEFEQA 348
Query: 241 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 291
+ D+W +S + D N +L + + +F+ +++K P+
Sbjct: 349 KGLYDEW-ESVSGTGDARIPNLILAEYMNRDEILLGEKFYERIVEKGINPS 398
>gi|224063635|ref|XP_002301239.1| predicted protein [Populus trichocarpa]
gi|222842965|gb|EEE80512.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 164 bits (414), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 156/291 (53%), Gaps = 2/291 (0%)
Query: 4 HKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKA 63
+ F LS SD A ++DL+ KV G+ S E +F LP + K Y ALL+ Y + EKA
Sbjct: 131 QERFGLSPSDAAIQLDLIAKVRGVSSAEDFFLRLPNTFKDRRIYGALLNAYVRNRMREKA 190
Query: 64 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 123
E L + ++ + +AL YN MMTLYM++ + +KV L++ E+ KN+ DI++YN+W+SS
Sbjct: 191 ESLIDEMRGKDYVTHALPYNVMMTLYMNINEYDKVDLIISEMNEKNIKLDIYSYNIWLSS 250
Query: 124 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQ 183
C + D++++ ++M D + +W + + +YI AE L E IT
Sbjct: 251 CGLQGSADKMEQVFEQMKSDGSINPNWTTFSTMATMYIKMGKFEKAE-DCLRRVESRITG 309
Query: 184 RQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI 243
R I Y +L+ LY +GNK+++ ++W + + + Y ++SS + + ++ +I
Sbjct: 310 RDRIPYHYLLSLYGNVGNKEEVYRVWNIYKSIFPSIPNLGYHAMISSLVRMDDIEGAEKI 369
Query: 244 IDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
++W TS +D N + AF G +KA F +L++ P + S
Sbjct: 370 YEEWLSIKTS-YDPRIANLFMAAFVYQGNLDKAESFFDHMLEEGGKPNSHS 419
>gi|218195308|gb|EEC77735.1| hypothetical protein OsI_16848 [Oryza sativa Indica Group]
Length = 1300
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 157/284 (55%), Gaps = 2/284 (0%)
Query: 7 FVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEEL 66
F LS SD A ++DL+ KV G+ E YFE LP K TY +LL++YA A EK E
Sbjct: 140 FSLSSSDMAIQLDLIAKVRGVSHAEEYFEELPDPLKDKRTYGSLLNVYAQAMMKEKTEST 199
Query: 67 FERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAA 126
FE++++ + + L +N +M Y+ + EKV+++++E+ +NV D+ TYN+WI SCAA
Sbjct: 200 FEQMRKKGFATDTLPFNVLMNFYVDAEEAEKVSILIDEMMERNVAFDVCTYNIWIKSCAA 259
Query: 127 TLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQW 186
+ D +++ ++M D +W Y L +++I + AE S L EAEK T R+
Sbjct: 260 MQDADAMEQVFNQMIRDETVVANWTTYTTLASMHIKLGNSEKAEES-LKEAEKRTTGREK 318
Query: 187 ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 246
+ +L+ LY+ LG K+++ ++W + T + + Y +LS+ + LG ++ + ++
Sbjct: 319 KCFHYLMTLYSHLGKKEEVYRVWNWYKATFPTIHNLGYQEVLSALVRLGDIEGAELLYEE 378
Query: 247 WKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
W S +S FD N LL ++ G KA + ++K P
Sbjct: 379 W-ASKSSSFDPKTMNILLAWYAREGFVTKAEQTLNRFVEKGGNP 421
>gi|225453344|ref|XP_002270492.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02150
[Vitis vinifera]
Length = 527
Score = 163 bits (412), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 95/280 (33%), Positives = 152/280 (54%), Gaps = 7/280 (2%)
Query: 5 KEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAE 64
+ F LS SD A ++DL+ KV G+ S E YF LP + K Y ALL+ Y AK +KAE
Sbjct: 121 ERFRLSSSDAAIQLDLIAKVCGVSSAEDYFSRLPDTLKDKRIYGALLNAYVQAKMRDKAE 180
Query: 65 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 124
L E+++ + L +N MMTLYM++ +++KV ++ E+ KN+ DI++YN+W+SSC
Sbjct: 181 ILIEKLRNKGYATTPLPFNVMMTLYMNLKELDKVQSMISEMMNKNIQLDIYSYNIWLSSC 240
Query: 125 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR 184
+T ++QV ++M + + +W + + +YI AE L + E IT R
Sbjct: 241 ESTERMEQV---FEQMKLERTINPNWTTFSTMATMYIKLGQFEKAE-ECLKKVESRITNR 296
Query: 185 QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEII 244
+ Y +LI LY GNK ++ + W + + + Y ++SS + +G L+ +I
Sbjct: 297 DRMPYHYLISLYGSTGNKAEVYRAWNIYKSKFPNIPNLGYHALISSLVRVGDLEGAEKIY 356
Query: 245 DQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF--HML 282
++W S S +D N LLG + G EKA F HM+
Sbjct: 357 EEW-LSVKSSYDPRIGNLLLGCYVKEGFLEKAEGFLDHMI 395
>gi|357165075|ref|XP_003580262.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g02150-like [Brachypodium distachyon]
Length = 513
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/284 (33%), Positives = 154/284 (54%), Gaps = 2/284 (0%)
Query: 7 FVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEEL 66
F LS SD A ++DL+ KV G+ E YFE LP K TY +LL++YA A+ EK E+
Sbjct: 142 FSLSSSDMAIQLDLVAKVRGVPHAEEYFESLPDPLKDKRTYGSLLNVYAQARMKEKTEDT 201
Query: 67 FERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAA 126
FE++++ + + L +N +M Y+ V + +KV+ V +E+K +NV D+ TYN+WI S AA
Sbjct: 202 FEQMRKKGYASDTLPFNVLMNFYVDVEEPQKVSAVTDEMKERNVSFDVCTYNIWIKSFAA 261
Query: 127 TLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQW 186
+ D + + ++M D +W Y L +++I + AE L EAEK T R
Sbjct: 262 MKDADGMDRVFNQMIADESVVANWTTYTTLASMHIKLGNFEKAE-VCLKEAEKRTTGRDK 320
Query: 187 ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 246
+ FLI LY+ L K+++ +IW + T + + Y +LS+ + LG ++ + ++
Sbjct: 321 KCFHFLITLYSYLQKKEEVYRIWNWYKATFSTIHNLGYQEVLSALVRLGDIEGAELLYEE 380
Query: 247 WKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
W S +S FD N LL +S G KA + ++K P
Sbjct: 381 W-ASKSSSFDPKTMNILLAWYSREGFVVKAEQTLNRFVEKGGNP 423
>gi|297734632|emb|CBI16683.3| unnamed protein product [Vitis vinifera]
Length = 423
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/280 (33%), Positives = 152/280 (54%), Gaps = 7/280 (2%)
Query: 5 KEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAE 64
+ F LS SD A ++DL+ KV G+ S E YF LP + K Y ALL+ Y AK +KAE
Sbjct: 55 ERFRLSSSDAAIQLDLIAKVCGVSSAEDYFSRLPDTLKDKRIYGALLNAYVQAKMRDKAE 114
Query: 65 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 124
L E+++ + L +N MMTLYM++ +++KV ++ E+ KN+ DI++YN+W+SSC
Sbjct: 115 ILIEKLRNKGYATTPLPFNVMMTLYMNLKELDKVQSMISEMMNKNIQLDIYSYNIWLSSC 174
Query: 125 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR 184
+T ++QV ++M + + +W + + +YI AE L + E IT R
Sbjct: 175 ESTERMEQV---FEQMKLERTINPNWTTFSTMATMYIKLGQFEKAE-ECLKKVESRITNR 230
Query: 185 QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEII 244
+ Y +LI LY GNK ++ + W + + + Y ++SS + +G L+ +I
Sbjct: 231 DRMPYHYLISLYGSTGNKAEVYRAWNIYKSKFPNIPNLGYHALISSLVRVGDLEGAEKIY 290
Query: 245 DQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF--HML 282
++W S S +D N LLG + G EKA F HM+
Sbjct: 291 EEW-LSVKSSYDPRIGNLLLGCYVKEGFLEKAEGFLDHMI 329
>gi|242076656|ref|XP_002448264.1| hypothetical protein SORBIDRAFT_06g024190 [Sorghum bicolor]
gi|241939447|gb|EES12592.1| hypothetical protein SORBIDRAFT_06g024190 [Sorghum bicolor]
Length = 515
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 91/284 (32%), Positives = 158/284 (55%), Gaps = 2/284 (0%)
Query: 7 FVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEEL 66
F LS SD A ++DL+ KV G+ E+YF+ LP + K TY +LL++YA A EK E+
Sbjct: 144 FSLSSSDMAIQLDLIAKVRGVSHAEKYFDELPDAMKDKRTYGSLLNVYAQAMMKEKTEDT 203
Query: 67 FERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAA 126
FE++++ + + L N +M Y+ G+ +V +++E+K +NV D+ TYN+WI SCAA
Sbjct: 204 FEQMRKKGFASDTLPCNVLMNFYVDSGEPNEVLAIIDEMKERNVSFDVCTYNIWIKSCAA 263
Query: 127 TLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQW 186
+ +++++ +M D +W Y L ++YI + AE L +AEK T R+
Sbjct: 264 KQDAEEMERVFSQMIADESVVANWTTYTTLASMYIKLGNSEKAE-ECLKDAEKRTTGREK 322
Query: 187 ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 246
+ +L+ LY+ LG K+++ +IW + T + + Y +LS+ + +G ++ + ++
Sbjct: 323 KCFHYLMTLYSHLGKKEEVYRIWNWYKATFPMIHNLGYQELLSALVRIGDIEGAELLYEE 382
Query: 247 WKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
W S +S FD N LL ++ GL KA + ++K P
Sbjct: 383 W-ASKSSSFDPKTMNILLAWYAKEGLITKAEQTLNRFVEKGGNP 425
>gi|147803609|emb|CAN75355.1| hypothetical protein VITISV_002476 [Vitis vinifera]
Length = 736
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/290 (32%), Positives = 155/290 (53%), Gaps = 5/290 (1%)
Query: 5 KEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAE 64
+ F LS SD A ++DL+ KV G+ S E YF LP + K Y ALL+ Y AK +KAE
Sbjct: 330 ERFRLSSSDAAIQLDLIAKVCGVSSAEDYFSRLPDTLKDKRIYGALLNAYVQAKMRDKAE 389
Query: 65 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 124
L E+++ + L +N MMTLYM++ +++KV ++ E+ KN+ DI++YN+W+SSC
Sbjct: 390 ILIEKLRNKGYATTPLPFNVMMTLYMNLKELDKVQSMISEMMNKNIQLDIYSYNIWLSSC 449
Query: 125 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR 184
+T ++QV ++M + + +W + + +YI AE L + E IT R
Sbjct: 450 ESTERMEQV---FEQMKLERTINPNWTTFSTMATMYIKLGQFEKAE-ECLKKVESRITNR 505
Query: 185 QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEII 244
+ Y +LI LY GNK ++ + W + + + Y ++SS + +G L+ +I
Sbjct: 506 DRMPYHYLISLYGSTGNKAEVYRAWNIYKSKFPNIPNLGYHALISSLVRVGDLEGAEKIY 565
Query: 245 DQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
++W S S +D N LLG + G EKA F +++ P + +
Sbjct: 566 EEW-LSVKSSYDPRIGNLLLGCYVKEGFLEKAEGFLDHMIEAGGKPNSTT 614
>gi|449462348|ref|XP_004148903.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
mitochondrial-like [Cucumis sativus]
gi|449491586|ref|XP_004158945.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
mitochondrial-like [Cucumis sativus]
Length = 531
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 159/291 (54%), Gaps = 4/291 (1%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M K+ L DYA +DL+ K+ G++ E++FE LP + T+LLH Y +
Sbjct: 106 MTLQKDMRLVPGDYAVHLDLICKIRGLNRAEKFFEDLPDKIREQSVCTSLLHAYVQNNLS 165
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
EKAE L E++ + + L +N M++L++S Q+EKV ++E +K KN PD+ TYNL
Sbjct: 166 EKAEALMEKMSECGFLKSPLSFNHMLSLHISNKQLEKVPALIEGLK-KNTKPDVVTYNLL 224
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
++ C + + + EM + DWV + L N+Y + L ++TL E EK
Sbjct: 225 LNVCTLQNDTEAAENIFLEMK-KTKIQPDWVSFSTLANLYC-KNQLTEKAAATLKEMEKM 282
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 240
+ ++ L+ LY LG+K+++ +IWK L+ + +KM+ R Y+C++SS + L L+E
Sbjct: 283 AFKSNRLSLSSLLSLYTNLGDKNEVYRIWKKLKSSFRKMSDREYMCMISSLVKLNELEEA 342
Query: 241 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 291
++ +W +S + D N +LGA+ E+A F+ +LQK P+
Sbjct: 343 EKLYTEW-ESVSGTRDTRVSNVMLGAYIKKNQIEQAESFYNRMLQKGTVPS 392
>gi|293332912|ref|NP_001168310.1| hypothetical protein [Zea mays]
gi|223947377|gb|ACN27772.1| unknown [Zea mays]
gi|414586053|tpg|DAA36624.1| TPA: hypothetical protein ZEAMMB73_688721 [Zea mays]
Length = 513
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 90/284 (31%), Positives = 158/284 (55%), Gaps = 2/284 (0%)
Query: 7 FVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEEL 66
F LS SD A ++DL+ KV G+ E+YF+ LP + K TY +LL++YA A EK EE
Sbjct: 142 FPLSSSDMAIQLDLIAKVRGVPHAEKYFDELPDAMKDKRTYGSLLNVYAQAMMKEKTEET 201
Query: 67 FERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAA 126
FE++++ + + L N +M Y+ G+ ++V +++E+K +NV D+ TYN+WI SCAA
Sbjct: 202 FEQMRKKGFASDTLPCNVLMNFYVDSGEPDEVLAIIDEMKERNVSFDVCTYNIWIKSCAA 261
Query: 127 TLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQW 186
+ +++++ +M D +W Y L ++Y+ + AE L +AEK T R+
Sbjct: 262 KQDAEEMEQVFSQMIADESVVANWTTYTTLASMYLKLGNSEKAE-ECLKDAEKRTTGREK 320
Query: 187 ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 246
+ +L+ LY+ LG K+++ +IW + T + + Y +LS+ + +G ++ + ++
Sbjct: 321 KCFHYLMTLYSHLGKKEEVYRIWNWYKATFPMIHNLGYQELLSALIRIGDIEGAELLYEE 380
Query: 247 WKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
W + S FD N LL ++ GL KA + ++K P
Sbjct: 381 WASKSYS-FDPKTMNILLAWYAKEGLITKAEQTVNRFVEKGGNP 423
>gi|255556039|ref|XP_002519054.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541717|gb|EEF43265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 485
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 166/287 (57%), Gaps = 2/287 (0%)
Query: 8 VLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELF 67
+ S +++A ++DL+ KV G S E YF L KT +TY ALL+ Y + T+++ +
Sbjct: 79 IFSSTEHAVQLDLIGKVRGFLSAENYFNNLMDHDKTDKTYGALLNCYVRQRQTDRSISHW 138
Query: 68 ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAAT 127
+++K+ L+ + L YN++M LY+++G EKV V+ E+K + PD F+Y + I+S A
Sbjct: 139 QKMKEMGLASSPLAYNDIMCLYINLGLYEKVLHVLTEMKENKISPDNFSYRICINSYGAR 198
Query: 128 LNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWI 187
+I ++K L+EM C G + DW Y + N YI A L + L ++E+ + ++ I
Sbjct: 199 SDIQGMEKVLNEMECRLGNAMDWNTYAVVANFYIKAG-LADKAVDALRKSEEKLDKKDGI 257
Query: 188 TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQW 247
Y+ LI LYA LG K ++ +IW + ++ +R+++ +L S + LG L+E +++ +W
Sbjct: 258 GYNHLISLYATLGIKSEVLRIWDLQKSVCKRRINRDFVTMLESLVKLGDLEEAEKVLKEW 317
Query: 248 KQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
+S+ + +D+ N ++ +S GL EKA L++K A T S
Sbjct: 318 -ESSGNFYDVRIPNIVVVGYSKNGLHEKAEASLEALMEKGRATTPNS 363
>gi|357131918|ref|XP_003567580.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01990,
mitochondrial-like [Brachypodium distachyon]
Length = 545
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 98/277 (35%), Positives = 158/277 (57%), Gaps = 4/277 (1%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
MV K +S +++A R+DL+ KV GI + E+YF GLP AK TY ALL+ Y +K
Sbjct: 137 MVHTKGMNMSYTNHAIRLDLVYKVRGIEAAEKYFNGLPDPAKNHRTYGALLNCYCSSKKE 196
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
EKA +LF ++ ++ + L +N +M+LYM +GQ +KVA + EE+K KNV PD T +
Sbjct: 197 EKATDLFHKMDDLGIASSTLPFNNLMSLYMKLGQHKKVAGLFEEMKAKNVKPDNLTCCVL 256
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
++S AA ID V++ L EM + + W Y L +IY++A LV S L + E
Sbjct: 257 MTSYAALNKIDAVEEVLKEME-EKNAALGWSAYSTLASIYVSAG-LVEKAESALKKLEGL 314
Query: 181 ITQRQWI-TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 239
+ R +DFL+ LYA +GN +++++W ++ T K+T+ +Y +L + L
Sbjct: 315 VQPRDGRQPFDFLMSLYASVGNLSEVNRVWDVVKATFPKVTNTSYFSMLQALYKLNDADR 374
Query: 240 VGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
+ +I ++W +S +D+ N + A GLT++A
Sbjct: 375 IKQIFEEW-ESNHECYDVKLTNIMTRAHLKNGLTKEA 410
>gi|224114960|ref|XP_002316903.1| predicted protein [Populus trichocarpa]
gi|222859968|gb|EEE97515.1| predicted protein [Populus trichocarpa]
Length = 437
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 97/286 (33%), Positives = 157/286 (54%), Gaps = 3/286 (1%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M +++ S SD A R+DL+ KV G+ S E YF+ L K +TY ALL+ Y
Sbjct: 58 MSSNRLCNFSPSDDAVRLDLIGKVHGLESAESYFKNLDEKDKIHKTYGALLNCYVRGGLV 117
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
EK+ +++K+ AL YN++M LY++ G +EKV V+ ++K + PD+F+Y +
Sbjct: 118 EKSLSHVQKMKELGFFSTALNYNDLMCLYVNTGLLEKVPDVLSDMKENGISPDLFSYRIC 177
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
+ S + D V+K L EM S S DW + + NIY+ A L L + E+
Sbjct: 178 LKSYGERSDFDNVEKILREMESQSHISMDWRTFATVANIYLEAG-LKEKALVYLKKCEEK 236
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 240
+ + + Y+ LI LYA LGNKD++ ++W+ + +K +R+YI IL S + LGHL+E
Sbjct: 237 VNKNA-LGYNHLISLYASLGNKDEMMRLWELAKANCKKQLNRDYITILGSLVKLGHLEEA 295
Query: 241 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 286
+++ W +S+ +D N +L +S GL EKA +++K
Sbjct: 296 EKLLQDW-ESSCQYYDFRVPNVVLIGYSRKGLPEKAEAMLQDIIEK 340
>gi|357151797|ref|XP_003575907.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
mitochondrial-like [Brachypodium distachyon]
Length = 501
Score = 160 bits (404), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 152/292 (52%), Gaps = 6/292 (2%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M T E L D+A +DL+ KV G+ S E++FE +P AK T ALLH Y
Sbjct: 88 MRTQPEMKLLPGDHAVHLDLVAKVRGLASAEKFFEDVPERAKGPSTCNALLHAYVQNGVR 147
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
+KAE + + + AL +N MM++YMS G++EKV +++E+ R+ +PD+ TYN+W
Sbjct: 148 DKAEAMLREMADAGYLTCALPFNHMMSMYMSSGELEKVPEMIKEL-RRYTIPDLVTYNIW 206
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
++ C+ ++ +K D M D DW+ + + +IYI A V + LVE EK
Sbjct: 207 LTYCSRKNSVKTAEKVFDLMK-DDKVFPDWMTFSLMASIYINAGLHVKGRDA-LVEMEKR 264
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 240
++++ Y L+ LYA L ++ +D++W +R +K + Y C+L+S G +
Sbjct: 265 ASRKERTAYSSLLTLYASLSDRGNLDRVWSKMREIFRKFSDTEYKCMLTSLTRFGDITAA 324
Query: 241 GEIIDQWK-QSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 291
+ +W+ +S T D I N +L G E A F ++QK P+
Sbjct: 325 ESVYSEWESESGTRDSRIP--NTILSFHIKNGKMEMAESFLQHIMQKGVKPS 374
>gi|255571041|ref|XP_002526471.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534146|gb|EEF35862.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 160 bits (404), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 162/290 (55%), Gaps = 2/290 (0%)
Query: 5 KEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAE 64
+ F LS SD A ++DL+ KV G+ S E YF L + K Y ALL+ Y A+ EKAE
Sbjct: 132 ERFRLSASDAAIQLDLVAKVRGVSSAEDYFMRLSDNVKDRRVYGALLNSYVKARMREKAE 191
Query: 65 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 124
L E++++ + + +AL +N MMTLYM++ + +KV +++ E+ KN+ DI++YN+W+SS
Sbjct: 192 SLIEKMRKKDYTTHALPFNVMMTLYMNLKEYDKVDMMISEMMAKNIRLDIYSYNIWLSSR 251
Query: 125 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR 184
+ +I+++++ ++M DS + +W + + +YI L AE L E IT R
Sbjct: 252 GSQGSIERMEEVYEQMKLDSTINPNWTTFSTMATMYIKMGQLEKAE-DCLRRVESRITGR 310
Query: 185 QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEII 244
I Y +L+ LY +GNK++I ++W + + + Y I+SS + + ++ +I
Sbjct: 311 DRIPYHYLLSLYGNVGNKEEIYRVWNIYKSIFATIPNLGYHAIISSLVRMDDIEGAEKIY 370
Query: 245 DQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
++W S +D N L+G + G +KA F +++ P +++
Sbjct: 371 EEW-LPVKSSYDPRIGNLLMGWYVRGGNLDKAESFFDHMMEVGGKPNSST 419
>gi|356522970|ref|XP_003530115.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g02150-like [Glycine max]
Length = 546
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 159/288 (55%), Gaps = 2/288 (0%)
Query: 5 KEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAE 64
+ F +S+SD A ++DL+ KV G+ S E +F L K +TY ALL++Y ++ EKAE
Sbjct: 144 ERFRVSESDAAIQLDLIAKVRGLSSAEAFFLSLEDKLKDKKTYGALLNVYVHSRSKEKAE 203
Query: 65 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 124
LF+ ++ +AL +N MMTLYM++ + KV ++ E+ KN+ DI+TYN+W+SSC
Sbjct: 204 SLFDTMRSKGYVIHALPFNVMMTLYMNLNEYAKVDILASEMMEKNIQLDIYTYNIWLSSC 263
Query: 125 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR 184
+ +++++++ ++M D +W + + ++YI AE L + E I R
Sbjct: 264 GSQGSVEKMEQVFEQMEKDPSIIPNWSTFSTMASMYIRMDQNEKAE-ECLRKVEGRIKGR 322
Query: 185 QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEII 244
I + +L+ LY +G KD++ ++W + + + + Y I+SS + L ++ ++
Sbjct: 323 DRIPFHYLLSLYGSVGKKDEVCRVWNTYKSIFPSIPNLGYHAIISSLVKLDDIEVAEKLY 382
Query: 245 DQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 292
++W S S +D N L+G + G T+KA F +L C P +
Sbjct: 383 EEW-ISVKSSYDPRIGNLLIGWYVKKGDTDKALSFFEQMLNDGCIPNS 429
>gi|242083618|ref|XP_002442234.1| hypothetical protein SORBIDRAFT_08g016710 [Sorghum bicolor]
gi|241942927|gb|EES16072.1| hypothetical protein SORBIDRAFT_08g016710 [Sorghum bicolor]
Length = 501
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 154/291 (52%), Gaps = 4/291 (1%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M T E L D+A +DL+ KV G+ S ++FE +P AK T ALLH Y
Sbjct: 88 MRTRPEMRLLPGDHAVHLDLVAKVRGLASAVKFFEDMPERAKAPSTCNALLHAYVQHGAR 147
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
EKAE + + ++ AL +N MM+LYM+ G++E+V +++E+ R+ VPD+ TYN+W
Sbjct: 148 EKAEAMMAEMARAGYLTCALPFNHMMSLYMASGELERVPEMIKEL-RRYTVPDLVTYNMW 206
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
++ C+ ++ +K M D DW+ + L +IYI A V ++ LVE EK
Sbjct: 207 LTYCSKKKSVKSAEKVFALMK-DDRVVPDWMTFSLLGSIYINAGLHVEGRNA-LVEMEKM 264
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 240
++++ Y L+ LYA L ++ +D++W +R T +K + Y C+L+S +
Sbjct: 265 ASRKERAAYSSLLTLYASLSDRGNLDRVWNKMRETFRKFSDTEYKCMLTSLTRFNDIAAA 324
Query: 241 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 291
+ +W +SA+ D N +L + G+ EKA F +++K P+
Sbjct: 325 EGLYREW-ESASGTRDSRIPNTILSYYIKNGMIEKAESFLGQIVEKGVKPS 374
>gi|224137116|ref|XP_002327026.1| predicted protein [Populus trichocarpa]
gi|222835341|gb|EEE73776.1| predicted protein [Populus trichocarpa]
Length = 539
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 154/289 (53%), Gaps = 2/289 (0%)
Query: 4 HKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKA 63
+ F LS SD A ++DL+ KV G+ + E +F LP + K Y ALL+ Y + EKA
Sbjct: 131 QERFRLSPSDAAIQLDLIAKVRGVSTAEDFFLSLPNTFKDRRVYGALLNAYVQNRMREKA 190
Query: 64 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 123
E LF+ ++ +AL +N MTLYM++ + +KV L++ E+ KN+ DI++YN+W+SS
Sbjct: 191 ETLFDEMRDKGYVTHALPFNVTMTLYMNIKEYDKVDLMISEMNEKNIKLDIYSYNIWLSS 250
Query: 124 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQ 183
C + + D++++ ++M D + +W + + +YI AE L E IT
Sbjct: 251 CGSQGSADKMEQVYEQMKSDRSINPNWTTFSTMATMYIKMGQFEKAE-DCLRRVESRITG 309
Query: 184 RQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI 243
R I Y +L+ LY +GNK+++ ++W + + + Y I+SS + L ++ +I
Sbjct: 310 RDRIPYHYLLSLYGNVGNKEEVYRVWNIYKSIFPSIPNLGYHAIISSLVRLDDIEGAEKI 369
Query: 244 IDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 292
++W TS +D N + A+ G ++A F +L+ P +
Sbjct: 370 YEEWLSIKTS-YDPRIANLFIAAYVYQGNLDEAKSFFDHMLEDGGKPNS 417
>gi|17064738|gb|AAL32523.1| Unknown protein [Arabidopsis thaliana]
gi|27311917|gb|AAO00924.1| Unknown protein [Arabidopsis thaliana]
Length = 532
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 166/291 (57%), Gaps = 4/291 (1%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
MV ++ L DYA +DL++K+ G++S E++FE +P + T+LLH Y K +
Sbjct: 119 MVVQEDIKLQAGDYAVHLDLISKIRGLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKLS 178
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
+KAE LFE++ + + L YN M+++Y+S GQ EKV ++++E+K + PDI TYNLW
Sbjct: 179 DKAEALFEKMGECGFLKSCLPYNHMLSMYISRGQFEKVPVLIKELKIR-TSPDIVTYNLW 237
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
+++ A+ +++ +K + + + + DWV Y L N+Y ++ A + L E EK
Sbjct: 238 LTAFASGNDVEGAEKVYLK-AKEEKLNPDWVTYSVLTNLYAKTDNVEKARLA-LREMEKL 295
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 240
++++ + Y LI L+A LG+KD ++ WK ++ + +KM Y+ ++S+ + LG ++
Sbjct: 296 VSKKNRVAYASLISLHANLGDKDGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQA 355
Query: 241 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 291
+ D+W +S + D N +L + + +F+ +++K P+
Sbjct: 356 KGLYDEW-ESVSGTGDARIPNLILAEYMNRDEVLLGEKFYERIVEKGINPS 405
>gi|15235508|ref|NP_192191.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213327|sp|Q9SY07.1|PP302_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g02820, mitochondrial; Flags: Precursor
gi|4263527|gb|AAD15353.1| hypothetical protein [Arabidopsis thaliana]
gi|7269767|emb|CAB77767.1| hypothetical protein [Arabidopsis thaliana]
gi|332656833|gb|AEE82233.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 532
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 166/291 (57%), Gaps = 4/291 (1%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
MV ++ L DYA +DL++K+ G++S E++FE +P + T+LLH Y K +
Sbjct: 119 MVVQEDIKLQAGDYAVHLDLISKIRGLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKLS 178
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
+KAE LFE++ + + L YN M+++Y+S GQ EKV ++++E+K + PDI TYNLW
Sbjct: 179 DKAEALFEKMGECGFLKSCLPYNHMLSMYISRGQFEKVPVLIKELKIR-TSPDIVTYNLW 237
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
+++ A+ +++ +K + + + + DWV Y L N+Y ++ A + L E EK
Sbjct: 238 LTAFASGNDVEGAEKVYLK-AKEEKLNPDWVTYSVLTNLYAKTDNVEKARLA-LKEMEKL 295
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 240
++++ + Y LI L+A LG+KD ++ WK ++ + +KM Y+ ++S+ + LG ++
Sbjct: 296 VSKKNRVAYASLISLHANLGDKDGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQA 355
Query: 241 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 291
+ D+W +S + D N +L + + +F+ +++K P+
Sbjct: 356 KGLYDEW-ESVSGTGDARIPNLILAEYMNRDEVLLGEKFYERIVEKGINPS 405
>gi|147807263|emb|CAN64166.1| hypothetical protein VITISV_006333 [Vitis vinifera]
Length = 506
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/279 (33%), Positives = 157/279 (56%), Gaps = 2/279 (0%)
Query: 8 VLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELF 67
S +++A ++DL+ +V G S E YF L KT +TY ALL+ Y + T+K+
Sbjct: 104 AFSPTEHAVQLDLIGRVRGFLSAESYFNSLQNHDKTDKTYGALLNCYVRQRQTDKSLSHL 163
Query: 68 ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAAT 127
+++K+ + + L YN++M LY +VGQ EKV V+ E+K+ +V PD F+Y + I+S AA
Sbjct: 164 QKMKEMGFASSPLTYNDIMCLYTNVGQHEKVPDVLTEMKQSHVYPDNFSYRICINSYAAQ 223
Query: 128 LNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWI 187
+I ++K L EM DW Y N YI A L + L ++E+ + +R +
Sbjct: 224 SDIQGMEKVLKEMERQPHIVMDWNTYAVAANFYIKAG-LPDKAIEALKKSEERLDKRDGL 282
Query: 188 TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQW 247
Y+ LI LYA LGNK ++ ++W + ++ +R+YI +L S + LG L+E +++ +W
Sbjct: 283 GYNHLISLYASLGNKAEVLRLWSLEKSACKRNINRDYITMLESLVRLGELEEAEKVLREW 342
Query: 248 KQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 286
+ S +D N ++ +S+ GL EKA L++K
Sbjct: 343 ESSGNC-YDFRVPNIVIIGYSEKGLFEKAEAMLKELMEK 380
>gi|226530677|ref|NP_001151760.1| tetratricopeptide-like helical [Zea mays]
gi|195649553|gb|ACG44244.1| tetratricopeptide-like helical [Zea mays]
gi|223942137|gb|ACN25152.1| unknown [Zea mays]
gi|413916645|gb|AFW56577.1| Tetratricopeptide-like helical [Zea mays]
Length = 501
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 153/291 (52%), Gaps = 4/291 (1%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M T E L D+A +DL+ KV G+ S ++FE +P AK T ALLH Y
Sbjct: 89 MRTQPEMRLLPGDHAVHLDLVAKVRGLASATKFFEDMPERAKGPSTCNALLHAYVQNGAR 148
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
EKAE + + + AL +N MM+LYM+ G++E+V +++E+ R+ +PD+ TYN+W
Sbjct: 149 EKAEAMLAEMARVGYLTCALPFNHMMSLYMATGELERVPEMIKEL-RRYTLPDLVTYNIW 207
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
++ C+ ++ +K M D DW+ + L +IYI A V ++ LVE EK
Sbjct: 208 LTYCSKKDSVKSAEKVFGLMK-DDCVVPDWMTFSLLGSIYINAGLHVEGRNA-LVEMEKR 265
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 240
++++ Y L+ LYA L ++ +D++W +R T +K + Y C+L+S L +
Sbjct: 266 ASRKERAAYSSLLTLYASLSDRGNLDRVWNKMRGTFRKFSDTEYKCMLTSLLRFDDIAAA 325
Query: 241 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 291
I +W +S + D N +L + G+ +KA F +++K P+
Sbjct: 326 ESIFSEW-ESTSGTRDSRIPNTILSYYIKNGMIKKAESFLDHIVEKGVKPS 375
>gi|255573349|ref|XP_002527601.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533018|gb|EEF34782.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 502
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 94/286 (32%), Positives = 160/286 (55%), Gaps = 3/286 (1%)
Query: 9 LSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFE 68
S +D+A ++DL+ +V G+ S E YF+ L + +TY ALL+ Y +K+ +
Sbjct: 101 FSPADHAVQLDLIGRVRGLESAESYFQNLVNQDRNDKTYGALLNCYVREGLVDKSLYHMQ 160
Query: 69 RVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATL 128
++K+ + + L YN++M LY GQ+EKV V+ E+K + PD+F+Y + +SSCAA
Sbjct: 161 KMKELGFASSPLNYNDLMCLYTRTGQLEKVTDVLSEMKENGITPDLFSYRICMSSCAARS 220
Query: 129 NIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWIT 188
++ V++ L+EM S S DWV Y + +IY+ AS L L + E+ + R +
Sbjct: 221 DLKGVEEILEEMENQSHISIDWVTYSTVASIYVKAS-LKEKALIYLKKCEQKVN-RDALG 278
Query: 189 YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK 248
Y+ LI L A LG KD++ ++W ++ +K +R+YI +L + + L L+E +++ +W
Sbjct: 279 YNHLISLNASLGIKDEVMRLWGLVKTKCKKQVNRDYITMLGALVKLEELEEADKLLQEW- 337
Query: 249 QSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
+S+ +D N LL + GL EKA +++K PT S
Sbjct: 338 ESSCQCYDFRVPNVLLIGYCQQGLIEKAEAMLKDIVKKQKNPTPNS 383
>gi|15240937|ref|NP_198098.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122214236|sp|Q3E911.1|PP400_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g27460
gi|332006308|gb|AED93691.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 491
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 95/296 (32%), Positives = 151/296 (51%), Gaps = 10/296 (3%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGL---PLSAKTSET-YTALLHLYAG 56
M K+ S D A R+DL+ K G+ GE YFE L +S + +++ Y LL Y
Sbjct: 96 MENQKDIEFSVYDIALRLDLIIKTHGLKQGEEYFEKLLHSSVSMRVAKSAYLPLLRAYVK 155
Query: 57 AKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFT 116
K ++AE L E++ +NEMM LY + GQ EKV +VV +K + ++ +
Sbjct: 156 NKMVKEAEALMEKLNGLGFLVTPHPFNEMMKLYEASGQYEKVVMVVSMMKGNKIPRNVLS 215
Query: 117 YNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLV- 175
YNLW+++C + V+ EM D W L N+YI + E + LV
Sbjct: 216 YNLWMNACCEVSGVAAVETVYKEMVGDKSVEVGWSSLCTLANVYIKSGF---DEKARLVL 272
Query: 176 -EAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLML 234
+AEK + + + Y FLI LYA LGNK+ + ++W+ + +++ NYIC+LSS +
Sbjct: 273 EDAEKMLNRSNRLGYFFLITLYASLGNKEGVVRLWEVSKSVCGRISCVNYICVLSSLVKT 332
Query: 235 GHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
G L+E + +W ++ ++D+ N LLGA+ G KA H +L++ P
Sbjct: 333 GDLEEAERVFSEW-EAQCFNYDVRVSNVLLGAYVRNGEIRKAESLHGCVLERGGTP 387
>gi|449432307|ref|XP_004133941.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g02150-like [Cucumis sativus]
gi|449525818|ref|XP_004169913.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g02150-like [Cucumis sativus]
Length = 537
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 156/290 (53%), Gaps = 2/290 (0%)
Query: 5 KEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAE 64
+ F L+ SD A ++DL++KV GI S E YF LP K Y ALL+ YA + EKAE
Sbjct: 133 ERFRLTTSDAAIQLDLISKVRGIKSAEEYFLRLPNHLKDRRIYGALLNAYAKGRQREKAE 192
Query: 65 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 124
L E+++ + + L +N MMTLYM+V + EKV +V E+ ++ DI++YN+W+SSC
Sbjct: 193 NLLEKMRTKGFTTHPLPFNVMMTLYMNVKEYEKVESLVSEMTENSIQLDIYSYNIWLSSC 252
Query: 125 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR 184
+ +++++ ++M D + +W + + +YI + AE L E I R
Sbjct: 253 GLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLMEKAE-ECLRRVESRIVGR 311
Query: 185 QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEII 244
I Y +LI LY +GNK+++ ++W + + + Y I+S+ + +G ++ +I
Sbjct: 312 DRIPYHYLISLYGSVGNKEEMYRVWNIYKNVFPTIPNLGYHAIISALIRVGDVEGAEKIY 371
Query: 245 DQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
++W + S +D N +G + G T KA F +++ P +++
Sbjct: 372 EEW-LTVKSTYDPRIANLFIGWYVKEGNTSKAESFFDHMVEVGGKPNSST 420
>gi|125579556|gb|EAZ20702.1| hypothetical protein OsJ_36321 [Oryza sativa Japonica Group]
Length = 491
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 88/266 (33%), Positives = 145/266 (54%), Gaps = 4/266 (1%)
Query: 26 GIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEM 85
G+ S E++FE +P AK T ALLH Y +KAE + E + ++ AL +N M
Sbjct: 103 GLPSAEKFFEDMPERAKGPSTCNALLHAYVQHGRRDKAEAMLEEMAKAGYLTCALPFNHM 162
Query: 86 MTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSG 145
M+LYMS G++EKV +++E+ R+ +PD+ TYN+W++ C+ ++ +K D M D
Sbjct: 163 MSLYMSSGELEKVPEMIKEL-RRYTIPDLVTYNIWLTYCSKKNSVKAAEKVYDLMK-DER 220
Query: 146 GSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKI 205
DW+ + L +IYI A V + LVE EK ++++ Y L+ LYA L ++ +
Sbjct: 221 VVPDWMTFSLLGSIYINAGLHVKGRDA-LVEMEKRASRKERAAYSSLLTLYASLSDRGNL 279
Query: 206 DQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLG 265
D++W+ +R T +K + Y C+L+S G + E +W +SA+ D N +L
Sbjct: 280 DRVWRKMRETFRKFSDTEYKCMLTSLTRFGDIAEAESFYSEW-ESASGTRDSRIPNTILA 338
Query: 266 AFSDVGLTEKANEFHMLLLQKNCAPT 291
+ G+ EKA F ++QK P+
Sbjct: 339 FYIKNGMMEKAEGFLDHIVQKGVKPS 364
>gi|359483464|ref|XP_003632962.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Vitis vinifera]
Length = 506
Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 93/279 (33%), Positives = 155/279 (55%), Gaps = 2/279 (0%)
Query: 8 VLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELF 67
S +++A ++DL+ +V G S E YF L KT +TY ALL+ Y + T+K+
Sbjct: 104 AFSPTEHAVQLDLIGRVRGFLSAESYFNSLQNHDKTDKTYGALLNCYVRQRQTDKSLSHL 163
Query: 68 ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAAT 127
+++K+ + + L YN++M LY +VGQ EKV V+ E+K+ NV PD F+Y + I+S A
Sbjct: 164 QKMKEMGFASSPLTYNDIMCLYTNVGQHEKVPDVLTEMKQSNVYPDNFSYRICINSYGAQ 223
Query: 128 LNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWI 187
+I ++ L EM DW Y N YI A L + L ++E+ + +R +
Sbjct: 224 SDIQGMENVLKEMERQPHIVMDWNTYAVAANFYIKAG-LPDKAIEALKKSEERLDKRDGL 282
Query: 188 TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQW 247
Y+ LI LYA LGNK ++ ++W + ++ +R+YI +L S + LG L+E +++ +W
Sbjct: 283 GYNHLISLYASLGNKAEVLRLWSLEKSACKRNINRDYITMLESLVRLGELEEAEKVLREW 342
Query: 248 KQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 286
+ S +D N ++ +S+ GL EKA L++K
Sbjct: 343 ESSGNC-YDFRVPNIVIIGYSEKGLFEKAEAMLKELMEK 380
>gi|449458295|ref|XP_004146883.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
mitochondrial-like [Cucumis sativus]
gi|449518825|ref|XP_004166436.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
mitochondrial-like [Cucumis sativus]
Length = 474
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/268 (33%), Positives = 150/268 (55%), Gaps = 3/268 (1%)
Query: 10 SDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFER 69
S +DYA R+DL++KV G+ + E+YF LP SAK TY ALL+ Y EKA LF++
Sbjct: 75 SFTDYALRLDLISKVNGVTAAEKYFYDLPPSAKNRCTYGALLNCYCKEMMEEKALTLFKK 134
Query: 70 VKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLN 129
+ + +S +L +N +MT+YM + EKV ++ E+K++ FTYN+W++SCA+ +
Sbjct: 135 MDELKIS-TSLSFNNLMTMYMRMDHPEKVPPLIGEMKQRGFYLTTFTYNVWMNSCASLND 193
Query: 130 IDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAE-SSTLVEAEKSITQRQWIT 188
I +V++ L+EM + DW Y NL + Y+ A AE + +E E + +
Sbjct: 194 IGKVEEILEEMKMEDRNKFDWTTYSNLASFYVKAGQFEKAELALKKLEEEMKSDKNDRLV 253
Query: 189 YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK 248
Y LI LYA N ++++IW +L+ MT+ +Y+ +L + L ++ + +W
Sbjct: 254 YHCLISLYASTSNLSEVNRIWNALKSVYSTMTNISYLVMLQALRKLKDIEGLKRTYKEW- 312
Query: 249 QSATSDFDISACNRLLGAFSDVGLTEKA 276
+S +FD+ N ++GA+ + E A
Sbjct: 313 ESNCRNFDLRIVNDIIGAYLQQDMYEDA 340
>gi|242091818|ref|XP_002436399.1| hypothetical protein SORBIDRAFT_10g001830 [Sorghum bicolor]
gi|241914622|gb|EER87766.1| hypothetical protein SORBIDRAFT_10g001830 [Sorghum bicolor]
Length = 536
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/237 (35%), Positives = 133/237 (56%), Gaps = 1/237 (0%)
Query: 12 SDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVK 71
SD A +DL+ K GI + E+YF LP ++KT TY ALL+ Y TEKAE L ++
Sbjct: 87 SDQAICLDLIAKSRGIAAAEKYFLDLPETSKTHLTYGALLNSYCKELMTEKAESLMAKMS 146
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
+ N +F A+ +N +MT+Y V Q EKV +++ +K +V+P +FTYN+W+ + AA +I
Sbjct: 147 ELNFAFTAMPFNSLMTMYTKVNQPEKVPGIIQYMKADDVLPHVFTYNVWMRALAALNDIP 206
Query: 132 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 191
V++ ++EM D + DW Y NL +IY+ A AE++ L E EK T Y F
Sbjct: 207 GVERVIEEMKRDGRVAPDWTTYSNLASIYVDAGLFEKAEAA-LKELEKRNTSNDVEAYQF 265
Query: 192 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK 248
LI LY N ++ ++W+SL+ +M + +Y+ ++ L L +W+
Sbjct: 266 LITLYGRTQNLVEVHRVWRSLKRNNPRMANMSYLNMIQVLANLKDLPAAEACFKEWE 322
>gi|326531954|dbj|BAK01353.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 518
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 149/291 (51%), Gaps = 5/291 (1%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M +HKE L D+A R+DL+ KV G E Y+ LP SA LLH Y +
Sbjct: 105 MDSHKEIKLLPLDHAARLDLIAKVHGTSQAEEYYNKLPNSASREAASFPLLHCYVAERNV 164
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
+KAE ++ L + +NEMM LY++ + EKV V++ +KR N+ + +YNLW
Sbjct: 165 QKAESFMASLQSIGLPVDPHSFNEMMKLYVATCEYEKVFSVIDLMKRNNIPRNALSYNLW 224
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES-STLVEAEK 179
+++C+ + ++ V+ EM D W Y L NI++ H +N+++ + L AE
Sbjct: 225 MNACSVS-DVTSVQSVFKEMVNDGTIEVGWSTYCTLANIFM--KHGLNSKAFACLRTAET 281
Query: 180 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 239
++ Q + Y F++ YA LG+ D + ++W++ + ++ S NY+ + + +G +
Sbjct: 282 KLSTAQRLGYSFVMTCYAALGDSDGVMRLWEASKCVPGRIPSANYMSAILCLIKVGDIDR 341
Query: 240 VGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
I W + D+ N LLGA+ G EKA + H+ +L+K P
Sbjct: 342 AEWIFGSW-EVECRKHDVRVSNVLLGAYVRNGWIEKAEKLHLHMLEKGGRP 391
>gi|356503236|ref|XP_003520417.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g02150-like [Glycine max]
Length = 555
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 157/288 (54%), Gaps = 2/288 (0%)
Query: 5 KEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAE 64
+ F +S+SD A ++DL+ KV G+ S E +F L K TY ALL++Y ++ EKAE
Sbjct: 143 ERFRVSESDAAIQLDLIAKVRGVSSAEAFFLSLEDKLKDKRTYGALLNVYVHSRSKEKAE 202
Query: 65 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 124
LF+ ++ +AL N MMTLYM++ + KV ++ E+ KN+ DI+TYN+W+SSC
Sbjct: 203 SLFDTMRSKGYVIHALPINVMMTLYMNLNEYAKVDMLASEMMEKNIQLDIYTYNIWLSSC 262
Query: 125 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR 184
+ +++++++ ++M D +W + L ++YI + AE L + E I R
Sbjct: 263 GSQGSVEKMEQVFEQMERDPTIVPNWSTFSTLASMYIRMNQNEKAE-KCLRKVEGRIKGR 321
Query: 185 QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEII 244
I + +L+ LY +G KD++ ++W + + ++ + Y I+SS + L ++ ++
Sbjct: 322 DRIPFHYLLSLYGSVGKKDEVYRVWNTYKSIFPRIPNLGYHAIISSLVKLDDIEGAEKLY 381
Query: 245 DQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 292
++W S S +D N L+G + T+KA F + C P +
Sbjct: 382 EEWI-SVKSSYDPRIGNLLMGWYVKKDDTDKALSFFEQISNDGCIPNS 428
>gi|224077120|ref|XP_002305141.1| predicted protein [Populus trichocarpa]
gi|222848105|gb|EEE85652.1| predicted protein [Populus trichocarpa]
Length = 492
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 153/269 (56%), Gaps = 2/269 (0%)
Query: 8 VLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELF 67
+ S S++A ++DL+ +V G S E YF L K +TY ALL+ Y + T+K+
Sbjct: 94 IFSPSEHAVQLDLIGRVHGFVSAENYFNNLRDQDKNEKTYGALLNCYVRQRETDKSILHL 153
Query: 68 ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAAT 127
+++K+ + ++L YN++M LY +VGQ EKV V+ E+K NV+PD F+Y L I+S A
Sbjct: 154 QKMKEMGFAKSSLTYNDIMCLYTNVGQHEKVPQVLNEMKENNVLPDNFSYRLCINSFGAR 213
Query: 128 LNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWI 187
+++ ++K L+EM DW Y N YI L + TL ++E + ++
Sbjct: 214 DDLEGMEKILNEMEHQPDIVMDWNTYAVAANFYIIGD-LTDKAIDTLKKSEARLDKKDGT 272
Query: 188 TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQW 247
Y+ LI LYA LGNK ++ ++W + ++ +++YI ++ S L L +E +++ +W
Sbjct: 273 GYNHLISLYAKLGNKTEVLRLWDLEKSACERHINKDYIIMMESLLKLSEFEEAEKMLKEW 332
Query: 248 KQSATSDFDISACNRLLGAFSDVGLTEKA 276
+S+ + +D+ N L+ +S GL EKA
Sbjct: 333 -ESSGNFYDVRVPNTLIIGYSRKGLCEKA 360
>gi|359480173|ref|XP_003632411.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g02370, mitochondrial-like [Vitis vinifera]
Length = 506
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 149/266 (56%), Gaps = 2/266 (0%)
Query: 2 VTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTE 61
+ +++ S +DYA R+DL++K G+ + E YF L SAK TY LL+ Y K E
Sbjct: 102 MENRKIFFSYADYAVRLDLLSKTKGLATAEEYFNNLSPSAKNLLTYGTLLNCYCKEKMEE 161
Query: 62 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 121
KA LFE++ + N + +L +N +M+L+M +G+ E V +V+E+K++++ PD FTYN+ +
Sbjct: 162 KALALFEKMDELNFASTSLTFNNLMSLHMRLGKPEMVPPLVDEMKKRSISPDTFTYNILM 221
Query: 122 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI 181
S A +I+ ++ L+E+ ++ W Y NL +Y+ A AE + L + E+ +
Sbjct: 222 QSYARLNDIEGAERVLEEIKRENEDKLSWTTYSNLAAVYVNARLFEKAELA-LKKLEEEM 280
Query: 182 TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVG 241
+ Y FLI LYAG+ N +++++W SL+ K + +Y +L + L + +
Sbjct: 281 GFHDRLAYHFLISLYAGINNLSEVNRVWNSLKSAFPKTNNMSYFIMLQALANLNDVDGLK 340
Query: 242 EIIDQWKQSATSDFDISACNRLLGAF 267
++WK S S FD+ N + AF
Sbjct: 341 ICFEEWKSSCFS-FDVRLANVAVRAF 365
>gi|297743994|emb|CBI36964.3| unnamed protein product [Vitis vinifera]
Length = 526
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 149/266 (56%), Gaps = 2/266 (0%)
Query: 2 VTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTE 61
+ +++ S +DYA R+DL++K G+ + E YF L SAK TY LL+ Y K E
Sbjct: 141 MENRKIFFSYADYAVRLDLLSKTKGLATAEEYFNNLSPSAKNLLTYGTLLNCYCKEKMEE 200
Query: 62 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 121
KA LFE++ + N + +L +N +M+L+M +G+ E V +V+E+K++++ PD FTYN+ +
Sbjct: 201 KALALFEKMDELNFASTSLTFNNLMSLHMRLGKPEMVPPLVDEMKKRSISPDTFTYNILM 260
Query: 122 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI 181
S A +I+ ++ L+E+ ++ W Y NL +Y+ A AE + L + E+ +
Sbjct: 261 QSYARLNDIEGAERVLEEIKRENEDKLSWTTYSNLAAVYVNARLFEKAELA-LKKLEEEM 319
Query: 182 TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVG 241
+ Y FLI LYAG+ N +++++W SL+ K + +Y +L + L + +
Sbjct: 320 GFHDRLAYHFLISLYAGINNLSEVNRVWNSLKSAFPKTNNMSYFIMLQALANLNDVDGLK 379
Query: 242 EIIDQWKQSATSDFDISACNRLLGAF 267
++WK S S FD+ N + AF
Sbjct: 380 ICFEEWKSSCFS-FDVRLANVAVRAF 404
>gi|395146485|gb|AFN53641.1| pentatricopeptide repeat-containing protein [Linum usitatissimum]
Length = 516
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 153/284 (53%), Gaps = 4/284 (1%)
Query: 9 LSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFE 68
L D A R+DL+ K GI E YF GL SAK TY +LL+ Y +EKA +LF+
Sbjct: 109 LGHGDLAVRLDLICKTKGITEAENYFNGLVPSAKNPATYGSLLNSYCKKLDSEKALQLFQ 168
Query: 69 RVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATL 128
++ + N+L +N +M++YM +GQ EKV +V ++K+ N+ P FTYN+WI S
Sbjct: 169 KMDKLKFFRNSLPFNNLMSMYMRLGQQEKVPELVSQMKQMNLPPCTFTYNIWIQSLGHMR 228
Query: 129 NIDQVKKFLDEMSCDS--GGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQW 186
+ + +KK L+EM D G + +W Y NL +Y +A A+ + L E+ I
Sbjct: 229 DFEGIKKVLEEMRNDVNFGNNFNWTTYSNLAAVYTSAGEFERAKLA-LKMMEERIDSHDR 287
Query: 187 ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 246
Y FL+ LY G+ + +++ ++W L+ ++T+ +Y+ +L + L ++ + ++ ++
Sbjct: 288 NAYHFLLTLYGGIADLEEVHRVWGCLKAKFNQVTNASYLVMLQALARLKDVEGISKVFEE 347
Query: 247 WKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
W+ TS +D+ N + + + G+ +A +++ P
Sbjct: 348 WESVCTS-YDMRVANVAIRVYLEKGMYNEAEAVFDGAMERTPGP 390
>gi|224084592|ref|XP_002307350.1| predicted protein [Populus trichocarpa]
gi|222856799|gb|EEE94346.1| predicted protein [Populus trichocarpa]
Length = 511
Score = 153 bits (387), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 144/291 (49%), Gaps = 2/291 (0%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M F ++ +A ++L+ KV G++ YFE +P S LLH Y +
Sbjct: 104 MENQNNFRITPGHHALMMELIVKVNGLNKAGEYFERIPGSGSKKAASLPLLHGYVKERDI 163
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
KAE ++ S L YNEMM LYM++ Q EKV LV+ E+KR + ++ +YNLW
Sbjct: 164 SKAESFMIKLSSSGLLVTPHPYNEMMKLYMALSQYEKVPLVIAEMKRNKLCRNVLSYNLW 223
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
+ + + + + EM D W +L N+YI A V+ L +AE
Sbjct: 224 MGAFGEVFEVAKAEMVYKEMVSDENVGVGWSTLASLANVYIKAG-FVDKALLVLKDAEMK 282
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 240
++ + Y FLI LY+ L NK+ + ++W++ + ++ +Y+C++S + +G L
Sbjct: 283 LSTNGRLGYFFLITLYSSLKNKEGVLRLWEASKAVGGRIPCADYMCVISCLVKVGDLVAA 342
Query: 241 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 291
++ +W ++ +DI N LLGA+ GL KA FH+ +++ P
Sbjct: 343 EQVFAEW-ETNCFKYDIRVSNVLLGAYVRNGLMGKAESFHLHTVERGGCPN 392
>gi|297809953|ref|XP_002872860.1| hypothetical protein ARALYDRAFT_490379 [Arabidopsis lyrata subsp.
lyrata]
gi|297318697|gb|EFH49119.1| hypothetical protein ARALYDRAFT_490379 [Arabidopsis lyrata subsp.
lyrata]
Length = 500
Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 88/273 (32%), Positives = 143/273 (52%), Gaps = 2/273 (0%)
Query: 4 HKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKA 63
KE V + SD+A R+DL+ K G+ + E YF L S K TY +LL+ Y K +KA
Sbjct: 98 RKEIVFTGSDHAIRLDLIAKTKGLEAAETYFNSLNDSIKNQSTYGSLLNCYCVEKEEDKA 157
Query: 64 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 123
+ FE + N N+L +N +M +Y+ +GQ EKV +V +K+KN+ P TY++WI S
Sbjct: 158 KAHFENMVDLNHVSNSLPFNNLMAMYLRIGQSEKVPALVVAMKQKNITPCDITYSMWIQS 217
Query: 124 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQ 183
C + ++D V+K LDEM + G W + NL IYI AE + L E +
Sbjct: 218 CGSLKDLDGVEKVLDEMKAEGEGISSWDTFANLAAIYIKVGLYDKAEEA-LKSLENKMNP 276
Query: 184 RQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI 243
Y FLI LYAG+ N ++ ++W L+ + + +Y+ +L + L + + +I
Sbjct: 277 HIRDCYHFLISLYAGIANASEVYRVWDLLKKRHPNVNNSSYLTMLQALSKLNDIDGIKKI 336
Query: 244 IDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
+W +S +D+ N + ++ + E+A
Sbjct: 337 FTEW-ESTCWTYDMRMANVAISSYLKQNMYEEA 368
>gi|326502008|dbj|BAK06496.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 551
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/277 (34%), Positives = 155/277 (55%), Gaps = 4/277 (1%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
MV K +S +++A R+DL+ KV G+ + E+YFEGLP AK T+ ALL+ Y +K
Sbjct: 143 MVHTKGMNMSYTNHAIRLDLIYKVRGLEAAEKYFEGLPDPAKNHRTFGALLNCYCSSKEE 202
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
EKA +L+ ++ + +S + L N +M+LYM +GQ +KV + EE+K KNV PD T +
Sbjct: 203 EKATDLYRKMDELGISSSTLPINNLMSLYMKLGQHKKVCSLFEEMKEKNVKPDNLTCCIL 262
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
++S AA ID V++ L EM + G W Y L +IY +A LV S L + E
Sbjct: 263 MTSLAALNKIDDVEQVLKEME-EKDGVLGWSAYSTLASIYQSAG-LVEKAESALKKLEGL 320
Query: 181 ITQRQWI-TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 239
+ R +DFL+ LYA +GN ++ ++W ++ T K+T+ +Y +L + L L
Sbjct: 321 VQDRDGRQPFDFLMSLYASVGNLSEVKRVWGVVKATFPKVTNTSYFSMLQALLKLNDADY 380
Query: 240 VGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
+ ++ ++W +S +D N + A G+ ++A
Sbjct: 381 MKQVFEEW-ESNHEFYDAKLTNVMTRAHLKNGMAKEA 416
>gi|357137419|ref|XP_003570298.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Brachypodium distachyon]
Length = 513
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 148/291 (50%), Gaps = 4/291 (1%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M + K+ LS D+A R+DL+ KV G E Y++ L +A LLH Y +
Sbjct: 100 MDSRKDLNLSPLDHAARLDLIAKVHGTCHAEEYYKKLRNAACREAASFPLLHCYVAERNV 159
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
+KAE ++ L + +NEM+ LY++ Q EK V++ +KR N+ ++ +YNLW
Sbjct: 160 QKAESFMASLQSIGLPVDPHSFNEMLKLYVATCQFEKALAVIDLMKRSNIPRNVLSYNLW 219
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES-STLVEAEK 179
+++C + L + V+ EM D W + L NI+I H +N+++ + L AE
Sbjct: 220 MNAC-SVLGVASVQSVFKEMVNDGTVEVGWSTFCTLANIFI--KHGLNSKALACLRTAET 276
Query: 180 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 239
++ RQ + Y F++ YA L + D + ++W++ + ++ S NY+ + + +G + +
Sbjct: 277 KLSPRQRLGYSFVMTCYARLDDSDGVMRLWEASKSVPGRIPSANYMSTIICSIKVGDIAQ 336
Query: 240 VGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
I W+ D+ N LLGA+ G EKA H+ +L+K P
Sbjct: 337 AEWIFGSWEAECGRKNDVRVSNVLLGAYVRNGWIEKAERLHLHMLEKGAHP 387
>gi|115436124|ref|NP_001042820.1| Os01g0301000 [Oryza sativa Japonica Group]
gi|57899052|dbj|BAD87826.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|113532351|dbj|BAF04734.1| Os01g0301000 [Oryza sativa Japonica Group]
gi|215694668|dbj|BAG89859.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215706899|dbj|BAG93359.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 522
Score = 150 bits (379), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 96/277 (34%), Positives = 157/277 (56%), Gaps = 4/277 (1%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
MV K +S +++A R+DL+ KV GI + E+YF GLP K +TY ALL+ Y AK
Sbjct: 114 MVNTKGMNMSYTNHAIRLDLIYKVRGIEAAEQYFAGLPDPGKNHKTYGALLNCYCSAKME 173
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
+KA +++ ++ + +S + L N +M+LY+ +GQ KV + EE+K KNV PD T L
Sbjct: 174 DKATDIYRKMDELGISSSTLPINNLMSLYVKIGQHRKVTSLFEEMKVKNVKPDNLTCCLL 233
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
+SS AA ID V + L EM + + W Y L ++Y+ A+ + AES+ L + E
Sbjct: 234 MSSYAALNKIDTVGEVLKEME-EKKVALGWSAYSTLASLYVNANMVEEAESA-LKKLESL 291
Query: 181 I-TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 239
I Q +DFL+ LYA +GN +++++W ++ QK+T+ +Y+ +L + L
Sbjct: 292 IDVQAGRQPFDFLMSLYASVGNLSEVNRVWNLIKANFQKVTNTSYLGMLQALYKLNDDDR 351
Query: 240 VGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
+ +I + W +S ++D N + A GLT++A
Sbjct: 352 MKQIYEDW-ESNYENYDARLTNMMTRAHLRNGLTKEA 387
>gi|255548417|ref|XP_002515265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545745|gb|EEF47249.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 504
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 90/271 (33%), Positives = 150/271 (55%), Gaps = 6/271 (2%)
Query: 9 LSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSET-YTALLHLYAGAKWTEKAEELF 67
S +D A R+DL+ K GI + E YF GL SAK T Y ALL+ Y ++KA LF
Sbjct: 103 FSYADRAIRLDLIGKARGIAAAEDYFNGLSPSAKNHHTSYGALLNCYCKELMSDKALALF 162
Query: 68 ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAAT 127
+ + + +++L +N +M++YM +GQ EKV +V+E+K++ V P FTYN+W+ S
Sbjct: 163 QEMDEKKFLYSSLPFNNLMSMYMRLGQPEKVPPLVDEMKKRKVSPCSFTYNIWMQSYGCL 222
Query: 128 LNIDQVKKFLDEMSCDSGGSDD--WVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQ 185
+ V + L E+ D GG D+ W Y NL IY+ A AES+ L + E + R
Sbjct: 223 NDFQGVDRVLREIVND-GGKDNLQWTTYSNLATIYLKAGIFEKAESA-LKKLEAIMGFRN 280
Query: 186 WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIID 245
Y FLI +YAG GN ++++++W L+ + + + +Y+ +L + L ++ V +
Sbjct: 281 REAYHFLISIYAGTGNSNEVNRVWGLLKSSFNMINNLSYLVMLQALAKLKDVEGVAKCFR 340
Query: 246 QWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
+W +S +++D+ N + F + E+A
Sbjct: 341 EW-ESGCTNYDMRIANVAIRVFLQHDMYEEA 370
>gi|449479000|ref|XP_004155477.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 493
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 157/285 (55%), Gaps = 8/285 (2%)
Query: 9 LSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFE 68
LS D A + L++K G+ E+YF + S++ + Y ALLH Y K +KAE + +
Sbjct: 102 LSTGDIAVELHLISKARGLEQAEKYFSSIGESSRDHKVYGALLHCYVENKNLKKAEAIMQ 161
Query: 69 RVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATL 128
++++ L YN M+ LY +G+ EK+A +++E++ + PD FTYN+ +++ AA
Sbjct: 162 KMREVGFMKTPLSYNAMLNLYAHLGKHEKLAELLKEMEEMGIGPDRFTYNIRMNAYAAAS 221
Query: 129 NIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLV--EAEKSITQRQ- 185
+I ++K L +M D + DW Y + N Y A +E+S L+ +AE+ I +Q
Sbjct: 222 DITNMEKLLSKMEADPLVATDWHTYFVVGNGYFKAGL---SENSILMLKKAEQFIGDKQK 278
Query: 186 WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIID 245
W+ Y +L+ LYA +GNKD++ ++W +L +K + Y+CI+SS + L + I+
Sbjct: 279 WLAYQYLMTLYAAIGNKDEVYRVW-NLYTNLRKRFNSGYLCIISSLMKLDDIDGAERILK 337
Query: 246 QWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
+W+ TS FD N ++ ++ G +KA + L++ P
Sbjct: 338 EWESGDTS-FDFRIPNMMINSYCMKGFVDKAEAYINRLIETGKEP 381
>gi|297843032|ref|XP_002889397.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335239|gb|EFH65656.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 524
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 157/287 (54%), Gaps = 3/287 (1%)
Query: 5 KEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSE-TYTALLHLYAGAKWTEKA 63
++ S SD+A R+DL+ K G+ + E YF L SAK + TY AL++ Y KA
Sbjct: 119 RKMTFSVSDHAIRLDLIAKAKGLEAAENYFNNLDPSAKNHQSTYGALMNCYCVELEEGKA 178
Query: 64 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 123
+ FE++ + N N+L +N MM++YM + Q EKV ++V+ +K++ + P TY++W+ S
Sbjct: 179 KAHFEKMDELNFVNNSLPFNNMMSMYMRLSQPEKVPVLVDAMKQRGISPCGVTYSIWMQS 238
Query: 124 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQ 183
C + ++D ++K +DEM DS W + NL I+ A AES+ L EK +
Sbjct: 239 CGSLNDLDGLEKIIDEMGKDSEAKTTWNTFSNLAAIFTKAGLYEKAESA-LKSMEKKMNP 297
Query: 184 RQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI 243
++ FLI LYAG+ ++ ++W+SL+ + ++ + +Y+ +L + LG + + +I
Sbjct: 298 NNRDSHHFLISLYAGISKGTEVYRVWESLKKARPEVNNLSYLVMLQAMSKLGDIDGIKKI 357
Query: 244 IDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
+W +S +D+ N + + + E+A + ++K+ P
Sbjct: 358 FTEW-ESKCWAYDMRLANIAINTYLKGNMYEEAEKILDGAMEKSKGP 403
>gi|224125490|ref|XP_002329818.1| predicted protein [Populus trichocarpa]
gi|222870880|gb|EEF08011.1| predicted protein [Populus trichocarpa]
Length = 494
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/269 (32%), Positives = 151/269 (56%), Gaps = 2/269 (0%)
Query: 8 VLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELF 67
+ S S +A ++DL+ +V G S E YF L K +TY ALL+ Y + T+K+
Sbjct: 94 IFSPSQHAVQLDLIGRVHGFVSAENYFNNLRDQDKNEKTYGALLNCYVQKRETDKSISHL 153
Query: 68 ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAAT 127
+++K+ + ++L YN++M LY +VGQ EKV V+ E+K NV PD F+Y L ++S A
Sbjct: 154 QKMKEMGFAKSSLSYNDIMCLYTNVGQHEKVPQVLNEMKENNVSPDNFSYRLCMNSYGAR 213
Query: 128 LNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWI 187
+++ ++K L+EM DW Y + YI L + +L ++E + ++
Sbjct: 214 GDLEGMEKMLNEMEHQPDIVVDWNSYAVAASSYIKGG-LTDKAIDSLKKSETRLDKKDGT 272
Query: 188 TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQW 247
Y+ LI LYA LG K ++ ++W + T ++ +++YI I++S + L +EV +++ +W
Sbjct: 273 GYNHLISLYATLGEKTEVLRLWDLEKSTCERPINKDYINIMASLVKLDEFEEVEKVLKEW 332
Query: 248 KQSATSDFDISACNRLLGAFSDVGLTEKA 276
+ S +D+ N L+ +S GL EKA
Sbjct: 333 EASGNF-YDVRVPNTLIIGYSGKGLYEKA 360
>gi|125525544|gb|EAY73658.1| hypothetical protein OsI_01545 [Oryza sativa Indica Group]
Length = 522
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/277 (34%), Positives = 156/277 (56%), Gaps = 4/277 (1%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
MV K +S +++A R+DL+ KV GI + E YF GLP K +TY ALL+ Y AK
Sbjct: 114 MVNTKGMNMSYTNHAIRLDLIYKVRGIEAAELYFAGLPDPGKNHKTYGALLNCYCSAKME 173
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
+KA +++ ++ + +S + L N +M+LY+ +GQ KV + EE+K KNV PD T L
Sbjct: 174 DKATDIYRKMDELGISSSTLPINNLMSLYVKIGQHRKVTSLFEEMKVKNVKPDNLTCCLL 233
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
+SS AA ID V + L EM + + W Y L ++Y+ A+ + AES+ L + E
Sbjct: 234 MSSYAALNKIDTVGEVLKEME-EKKVALGWSAYSTLASLYVNANMVEEAESA-LKKLESL 291
Query: 181 I-TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 239
I Q +DFL+ LYA +GN +++++W ++ QK+T+ +Y+ +L + L
Sbjct: 292 IDVQAGRQPFDFLMSLYASVGNLSEVNRVWNLIKANFQKVTNTSYLGMLQALYKLNDDDR 351
Query: 240 VGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
+ +I + W +S ++D N + A GLT++A
Sbjct: 352 MKQIYEDW-ESNYENYDARLTNMMTRAHLRNGLTKEA 387
>gi|224130976|ref|XP_002320971.1| predicted protein [Populus trichocarpa]
gi|222861744|gb|EEE99286.1| predicted protein [Populus trichocarpa]
Length = 473
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/263 (32%), Positives = 144/263 (54%), Gaps = 2/263 (0%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQS 73
+A +DL+ K GI + E YF+GL S + T+ ALL Y +EKA LFE++ +
Sbjct: 80 HAVYLDLIAKKEGIAAAENYFDGLSPSEQNHSTHGALLSCYCRELMSEKALTLFEKMDKM 139
Query: 74 NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQV 133
+L +N +++L++ + Q EKV +V+E+K+K V P FTYN+W+ S + + V
Sbjct: 140 KFLLTSLPFNNLISLHLRLDQPEKVLPIVQEMKQKGVSPCTFTYNMWMQSYGCLNDFEGV 199
Query: 134 KKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLI 193
++ LDEM D + W Y NL IY+ A H AES+ L + E+ I + Y FLI
Sbjct: 200 ERVLDEMKMDGQKNFSWTTYTNLATIYVKAGHFDKAESA-LKKVEEQIERDYREAYHFLI 258
Query: 194 ILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATS 253
LYAG N +++++W SL+ T+ +Y+ +L + L ++ + + +W+ S S
Sbjct: 259 TLYAGTSNLGEVNRVWNSLKSNFHTTTNVSYLTMLHTLAKLKDVEGLLKCFKEWESSCHS 318
Query: 254 DFDISACNRLLGAFSDVGLTEKA 276
+D+ N + A + + E+A
Sbjct: 319 -YDMRLANVAIRACLEHDMYEEA 340
>gi|225461407|ref|XP_002282230.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial [Vitis vinifera]
Length = 504
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 154/286 (53%), Gaps = 3/286 (1%)
Query: 9 LSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFE 68
S S A ++DL+ +V G+ S E YF + K + Y ALL+ Y + +K+ +
Sbjct: 103 FSPSARAVQLDLIGQVRGLESAENYFNNMSAEEKIDKMYGALLNCYVRERVIDKSLSHLQ 162
Query: 69 RVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATL 128
++K+ + L YN +M LY++ Q+EK+ V+ E++ + PD F+Y L I+S A
Sbjct: 163 KMKELGFASTPLPYNGLMCLYINTDQLEKIPDVLSEMQENGISPDNFSYRLCINSYGARS 222
Query: 129 NIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWIT 188
+++ ++K L+EM S DW+ Y + N YI A +N ++ ++ ++ + +
Sbjct: 223 DLNSMEKILEEMESKSHIHIDWMTYSMVANFYIKAG--LNEKALFFLKKAETKLHKDPLG 280
Query: 189 YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK 248
Y+ LI LYA LG+K ++ ++W+ + +K+ +R+YI +L S + LG L++ ++ +W+
Sbjct: 281 YNHLISLYASLGSKAEMMRLWERRKTASKKLINRDYITMLGSLVKLGELEDTEALLKEWE 340
Query: 249 QSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
S +D N LL F GL EKA ++++ PT S
Sbjct: 341 SSGNC-YDFRVPNTLLIGFCQKGLIEKAESMLRDIVEEGKTPTPNS 385
>gi|297848282|ref|XP_002892022.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297337864|gb|EFH68281.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 523
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 155/290 (53%), Gaps = 2/290 (0%)
Query: 5 KEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAE 64
+ F LS SD A ++DL+ KV GI E++F LP + K Y +LL+ Y AK EKAE
Sbjct: 129 ERFRLSASDAAIQLDLIGKVRGISDAEQFFLTLPENFKDRRVYGSLLNAYVRAKSREKAE 188
Query: 65 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 124
L ++ + + L +N MMTLYM++ + +KV +V E+K+K++ DI++YN+W+SSC
Sbjct: 189 ALLHTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWLSSC 248
Query: 125 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR 184
+ ++++++ +M D + +W + + +YI AE + L + E IT R
Sbjct: 249 GSLGSVEKMELVYQQMKSDVSINPNWTTFSTMATMYIKMGETEKAEDA-LRKVEARITGR 307
Query: 185 QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEII 244
I Y +L+ LY +GNK ++ ++W + + + Y ++SS +G ++ ++
Sbjct: 308 NRIPYHYLLSLYGSVGNKKELYRVWNVYKSVVPSIPNLGYHALVSSLARMGDIEGAEKVY 367
Query: 245 DQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
++W S +D N L+ + EKA +++ P++++
Sbjct: 368 EEW-LPVKSSYDPRIPNLLMNVYVKNDQLEKAEGLFDHMVEMGGKPSSST 416
>gi|20453085|gb|AAM19786.1| At1g02150/T7I23.8 [Arabidopsis thaliana]
gi|29028736|gb|AAO64747.1| At1g02150/T7I23.8 [Arabidopsis thaliana]
Length = 524
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 154/290 (53%), Gaps = 2/290 (0%)
Query: 5 KEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAE 64
+ F LS SD A ++DL+ KV GI E +F LP + K Y +LL+ Y AK EKAE
Sbjct: 130 ERFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVRAKSREKAE 189
Query: 65 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 124
L ++ + + L +N MMTLYM++ + +KV +V E+K+K++ DI++YN+W+SSC
Sbjct: 190 ALLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWLSSC 249
Query: 125 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR 184
+ ++++++ +M D +W + + +YI AE + L + E IT R
Sbjct: 250 GSLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDA-LRKVEARITGR 308
Query: 185 QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEII 244
I Y +L+ LY LGNK ++ ++W + + + Y ++SS + +G ++ ++
Sbjct: 309 NRIPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEKVY 368
Query: 245 DQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
++W S +D N L+ A+ E A +++ P++++
Sbjct: 369 EEW-LPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSST 417
>gi|224064562|ref|XP_002301516.1| predicted protein [Populus trichocarpa]
gi|222843242|gb|EEE80789.1| predicted protein [Populus trichocarpa]
Length = 476
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 99/313 (31%), Positives = 157/313 (50%), Gaps = 33/313 (10%)
Query: 9 LSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFE 68
S D+A +DL K GI + E YF+ LP S + TY+ LL+ Y +EKA LFE
Sbjct: 64 FSHVDHAVYLDLTAKTKGIAAAENYFDNLPPSVQNHVTYSTLLNCYCKELMSEKALTLFE 123
Query: 69 RVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATL 128
++ + L ++ +N +MTL+M +GQ EKV +V+E+K++ V P FTYN+W+ S
Sbjct: 124 KMDKMKLLSTSMPFNNLMTLHMRLGQPEKVLGIVQEMKQRGVSPGTFTYNIWMQSYGCLN 183
Query: 129 NIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT------ 182
+ + V++ LDEM D + W Y NL IY+ A AES+ L + E+ I
Sbjct: 184 DFEGVQRVLDEMKTDGKENFSWTTYSNLATIYVKAGLFDKAESA-LRKLEEQIECGRDCD 242
Query: 183 -QRQWI------TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLG 235
Q++ Y FLI LYAG N ++ ++W SL+ + + T+ +Y+ +L + L
Sbjct: 243 FQKKRRHDADREAYHFLISLYAGTSNLSEVHRVWNSLKSSFRTTTNISYLNVLQALAKLK 302
Query: 236 HLKEVGEIIDQWKQSATSDFDISACNRLLGA-------------FSDV-----GLTEKAN 277
++ + + +W+ S S +D+ N + A F + GL KA
Sbjct: 303 DVEGILKCFKEWESSCHS-YDMGLANVAIRACLEHDMYEEAASIFDEALKRTKGLFFKAR 361
Query: 278 EFHMLLLQKNCAP 290
E M+ KN P
Sbjct: 362 EMFMVFFLKNHQP 374
>gi|22329290|ref|NP_171717.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806400|sp|Q8LPS6.2|PPR3_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g02150
gi|2317908|gb|AAC24372.1| Unknown protein [Arabidopsis thaliana]
gi|332189272|gb|AEE27393.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 524
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 154/290 (53%), Gaps = 2/290 (0%)
Query: 5 KEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAE 64
+ F LS SD A ++DL+ KV GI E +F LP + K Y +LL+ Y AK EKAE
Sbjct: 130 ERFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVRAKSREKAE 189
Query: 65 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 124
L ++ + + L +N MMTLYM++ + +KV +V E+K+K++ DI++YN+W+SSC
Sbjct: 190 ALLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWLSSC 249
Query: 125 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR 184
+ ++++++ +M D +W + + +YI AE + L + E IT R
Sbjct: 250 GSLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDA-LRKVEARITGR 308
Query: 185 QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEII 244
I Y +L+ LY LGNK ++ ++W + + + Y ++SS + +G ++ ++
Sbjct: 309 NRIPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEKVY 368
Query: 245 DQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
++W S +D N L+ A+ E A +++ P++++
Sbjct: 369 EEW-LPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSST 417
>gi|356555227|ref|XP_003545936.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Glycine max]
Length = 486
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/269 (32%), Positives = 147/269 (54%), Gaps = 2/269 (0%)
Query: 8 VLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELF 67
+ S ++YA +DL+ KV G S E YF+ L KT++TY ALL+ Y + T+KA
Sbjct: 86 IFSPTEYAVHLDLIGKVHGFSSAETYFDALKDQHKTNKTYGALLNCYVRQRQTDKALSHL 145
Query: 68 ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAAT 127
+++K + + L YN++M LY ++GQ EKV V+ E+K+ V+PD F+Y + I+S
Sbjct: 146 QKMKDLGFASSPLTYNDIMCLYTNIGQHEKVPDVLREMKQNQVLPDNFSYRICINSYGVR 205
Query: 128 LNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWI 187
+ V++ L EM DW Y N YI A L L ++E+ + +
Sbjct: 206 SDFGGVERVLKEMETQPNIVMDWNTYSIAANFYIKAG-LTRDAVCALRKSEERLDNKDGQ 264
Query: 188 TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQW 247
Y+ LI LYA LG K+++ +IW + ++ +R++ +L S + LG L E +I+ +W
Sbjct: 265 GYNHLISLYAQLGLKNEVMRIWDLEKNACKRCINRDFTTLLESLVKLGELDEAEKILKEW 324
Query: 248 KQSATSDFDISACNRLLGAFSDVGLTEKA 276
+S+ + +D + ++ +S GL EKA
Sbjct: 325 -ESSDNCYDFGIPSIVIIGYSQKGLHEKA 352
>gi|302143027|emb|CBI20322.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 154/286 (53%), Gaps = 3/286 (1%)
Query: 9 LSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFE 68
S S A ++DL+ +V G+ S E YF + K + Y ALL+ Y + +K+ +
Sbjct: 103 FSPSARAVQLDLIGQVRGLESAENYFNNMSAEEKIDKMYGALLNCYVRERVIDKSLSHLQ 162
Query: 69 RVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATL 128
++K+ + L YN +M LY++ Q+EK+ V+ E++ + PD F+Y L I+S A
Sbjct: 163 KMKELGFASTPLPYNGLMCLYINTDQLEKIPDVLSEMQENGISPDNFSYRLCINSYGARS 222
Query: 129 NIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWIT 188
+++ ++K L+EM S DW+ Y + N YI A +N ++ ++ ++ + +
Sbjct: 223 DLNSMEKILEEMESKSHIHIDWMTYSMVANFYIKAG--LNEKALFFLKKAETKLHKDPLG 280
Query: 189 YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK 248
Y+ LI LYA LG+K ++ ++W+ + +K+ +R+YI +L S + LG L++ ++ +W+
Sbjct: 281 YNHLISLYASLGSKAEMMRLWERRKTASKKLINRDYITMLGSLVKLGELEDTEALLKEWE 340
Query: 249 QSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
S +D N LL F GL EKA ++++ PT S
Sbjct: 341 SSGNC-YDFRVPNTLLIGFCQKGLIEKAESMLRDIVEEGKTPTPNS 385
>gi|115449217|ref|NP_001048388.1| Os02g0796400 [Oryza sativa Japonica Group]
gi|47497029|dbj|BAD19082.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47497238|dbj|BAD19283.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113537919|dbj|BAF10302.1| Os02g0796400 [Oryza sativa Japonica Group]
gi|125584008|gb|EAZ24939.1| hypothetical protein OsJ_08720 [Oryza sativa Japonica Group]
Length = 517
Score = 147 bits (370), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 142/290 (48%), Gaps = 2/290 (0%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M +H +F LS SD+ R+DL+ KV G E Y+ L +A LLH Y +
Sbjct: 107 MDSHNDFRLSPSDHMVRLDLIAKVHGTSQAEEYYRKLSTAASKKAASFPLLHCYVTERNV 166
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
+KAE +++ L + +NE+M LY++ Q EKV V+ +KR N+ ++ +YN+W
Sbjct: 167 QKAETFMAELQRYGLPVDPHSFNEIMKLYVATCQYEKVLSVIYLMKRNNIPRNVLSYNIW 226
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
+++CA + V+ EM D W Y L NI+ A + L AE
Sbjct: 227 MNACAEVSGLASVQSAFKEMLNDDMVEVGWSTYCTLANIFKKYGQSSKA-LACLRTAETK 285
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 240
++ + Y F++ YA L ++D + ++W++ ++ ++ + NY+ + + +G +
Sbjct: 286 LSSTGRLGYSFIMTCYAALNDRDGVIRLWEASKIVPGRIPAANYMSAMVCLIKVGDIGRA 345
Query: 241 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
W ++ + D+ N LLGA+ G EKA H+ +L+K P
Sbjct: 346 EWTFGSW-EAESKKHDVRVSNVLLGAYVRNGWIEKAERLHLHMLEKGAHP 394
>gi|297832672|ref|XP_002884218.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330058|gb|EFH60477.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 491
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 154/287 (53%), Gaps = 4/287 (1%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M H+ +++ D A R+DL+ KV G+ E++FE +P+ + Y ALL+ YA K
Sbjct: 97 MSEHRVHEITEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVL 156
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
KAE++F+ +K+ L YN M+ LY+ G+ V ++ E++ V PDIFT N
Sbjct: 157 HKAEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDGTVKPDIFTVNTR 216
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
+ + +A +++ ++KFL D+G DW Y + N YI A L L ++E+
Sbjct: 217 LHAYSAVSDVEGMEKFLMRCEADTGLHLDWRTYADTANGYIKAG-LTEKAIEMLRKSEQM 275
Query: 181 ITQRQWI-TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 239
+ R+ Y+ L+ Y G K+++ ++W SL + YI ++S+ L + ++E
Sbjct: 276 VNPRKRKHAYEVLMSFYGAAGKKEEVYRLW-SLYKELDGFYNTGYISVISALLKMDDIEE 334
Query: 240 VGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 286
V +I+++W ++ S FDI + L+ + G+ EKA E +L+QK
Sbjct: 335 VEKIMEEW-EAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNMLVQK 380
>gi|15225409|ref|NP_179663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206559|sp|Q9SKU6.1|PP166_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g20710, mitochondrial; Flags: Precursor
gi|4454477|gb|AAD20924.1| hypothetical protein [Arabidopsis thaliana]
gi|51315392|gb|AAT99801.1| At2g20710 [Arabidopsis thaliana]
gi|330251965|gb|AEC07059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 490
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 154/287 (53%), Gaps = 4/287 (1%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M H+ +S+ D A R+DL+ KV G+ E++FE +P+ + Y ALL+ YA K
Sbjct: 96 MSEHRVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVL 155
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
KAE++F+ +K+ L YN M+ LY+ G+ V ++ E++ + V PDIFT N
Sbjct: 156 HKAEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTR 215
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
+ + + +++ ++KFL D G DW Y + N YI A L L ++E+
Sbjct: 216 LHAYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAG-LTEKALEMLRKSEQM 274
Query: 181 I-TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 239
+ Q++ Y+ L+ Y G K+++ ++W SL + YI ++S+ L + ++E
Sbjct: 275 VNAQKRKHAYEVLMSFYGAAGKKEEVYRLW-SLYKELDGFYNTGYISVISALLKMDDIEE 333
Query: 240 VGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 286
V +I+++W ++ S FDI + L+ + G+ EKA E +L+QK
Sbjct: 334 VEKIMEEW-EAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQK 379
>gi|42570837|ref|NP_973492.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|119935915|gb|ABM06033.1| At2g20710 [Arabidopsis thaliana]
gi|330251966|gb|AEC07060.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 395
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 154/287 (53%), Gaps = 4/287 (1%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M H+ +S+ D A R+DL+ KV G+ E++FE +P+ + Y ALL+ YA K
Sbjct: 1 MSEHRVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVL 60
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
KAE++F+ +K+ L YN M+ LY+ G+ V ++ E++ + V PDIFT N
Sbjct: 61 HKAEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTR 120
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
+ + + +++ ++KFL D G DW Y + N YI A L L ++E+
Sbjct: 121 LHAYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAG-LTEKALEMLRKSEQM 179
Query: 181 I-TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 239
+ Q++ Y+ L+ Y G K+++ ++W SL + YI ++S+ L + ++E
Sbjct: 180 VNAQKRKHAYEVLMSFYGAAGKKEEVYRLW-SLYKELDGFYNTGYISVISALLKMDDIEE 238
Query: 240 VGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 286
V +I+++W ++ S FDI + L+ + G+ EKA E +L+QK
Sbjct: 239 VEKIMEEW-EAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQK 284
>gi|357146877|ref|XP_003574143.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Brachypodium distachyon]
Length = 511
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/283 (32%), Positives = 154/283 (54%), Gaps = 4/283 (1%)
Query: 13 DYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQ 72
D+A +DL+ +V G+ + E YF L KT + Y ALL+ Y +K+ F+++K+
Sbjct: 128 DHAVHLDLIGQVHGVGAAEAYFNKLADKDKTEKPYGALLNCYTRELLVDKSLAHFQKMKE 187
Query: 73 SNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQ 132
F++L YN +M LY ++GQ EKV V+ E+K +VPD F+Y + I+S A +
Sbjct: 188 LGFVFSSLPYNNLMGLYTNLGQHEKVPSVIAEMKSNGIVPDNFSYRICINSYGARADFFG 247
Query: 133 VKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFL 192
++ L+EM C+ DW Y L N YI + L + S L +AE I + TY+ L
Sbjct: 248 MENTLEEMECEPQIVVDWNTYAVLANNYIKGN-LRDKAISALQKAEAKIDIKDSDTYNHL 306
Query: 193 IILYAGLGNKDKIDQIWKSLRMTK-QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 251
+ LY LG+K ++ ++W +L+M+ ++ +++Y +L+ L L ++E ++ +W +S+
Sbjct: 307 MSLYGQLGDKSEVKRLW-ALQMSNCKRHINKDYTTMLAMLLKLDEIEEAEALLKEW-ESS 364
Query: 252 TSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
+ FD N LL + L +KA L+K PT+ S
Sbjct: 365 ENAFDFHVPNVLLTGYRQKDLLDKAEALLDDFLKKGKMPTSTS 407
>gi|17529324|gb|AAL38889.1| unknown protein [Arabidopsis thaliana]
Length = 537
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 155/287 (54%), Gaps = 3/287 (1%)
Query: 5 KEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSE-TYTALLHLYAGAKWTEKA 63
++ S SD+A +DL+ K G+ + E YF L SAK + TY AL++ Y EKA
Sbjct: 132 RKMTFSVSDHAICLDLIGKTKGLEAAENYFNNLDPSAKNHQSTYGALMNCYCVELEEEKA 191
Query: 64 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 123
+ FE + + N N+L +N MM++YM + Q EKV ++V+ IK++ + P TY++W+ S
Sbjct: 192 KAHFEIMDELNFVNNSLPFNNMMSMYMRLSQPEKVPVLVDAIKQRGISPCGVTYSIWMQS 251
Query: 124 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQ 183
C + ++D ++K +DEM DS W + NL IY T + L S L E+ +
Sbjct: 252 CGSLNDLDGLEKIIDEMGKDSEAKTTWNTFSNLAAIY-TKAGLYEKADSALKSMEEKMNP 310
Query: 184 RQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI 243
++ FL+ LYAG+ ++ ++W+SL+ + ++ + +Y+ +L + LG L + +I
Sbjct: 311 NNRDSHHFLMSLYAGISKGPEVYRVWESLKKARPEVNNLSYLVMLQAMSKLGDLDGIKKI 370
Query: 244 IDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
+W +S +D+ N + + + E+A + ++K+ P
Sbjct: 371 FTEW-ESKCWAYDMRLANIAINTYLKGNMYEEAEKILDGAMKKSKGP 416
>gi|242034057|ref|XP_002464423.1| hypothetical protein SORBIDRAFT_01g017970 [Sorghum bicolor]
gi|241918277|gb|EER91421.1| hypothetical protein SORBIDRAFT_01g017970 [Sorghum bicolor]
Length = 496
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 153/291 (52%), Gaps = 4/291 (1%)
Query: 4 HKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKA 63
H +F+ D+A +DL+ +V G+ + E YF L KT + Y ALL+ Y +KA
Sbjct: 108 HVKFL--PKDHAIHLDLIGQVHGVGAAETYFNNLSDKDKTEKPYGALLNCYTRELLVDKA 165
Query: 64 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 123
F+ +K+ F+AL YN +M LY ++GQ E+V +V+ E+KR +VPD F+Y + I+S
Sbjct: 166 LAHFQNMKELGFVFSALSYNNLMGLYTNIGQHERVPMVMAEMKRDGIVPDNFSYRICINS 225
Query: 124 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQ 183
+ ++ L+EM C+ DW Y + + YI +L S L +AE + +
Sbjct: 226 YGIRADFFGLENTLEEMECEPQIVVDWNTYAVVASNYIKG-YLREKAYSALRKAEAKMDK 284
Query: 184 RQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI 243
+ Y LI LY LG+K ++ ++W + ++ +++Y +L+ + L + E ++
Sbjct: 285 KDGDAYGHLISLYGHLGDKLEVKRLWALHMLNCKRYINKDYTNMLAVLVKLDEITEAEDL 344
Query: 244 IDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
+ +W +S+ + FD N LL + GL +KA L+K PT+ S
Sbjct: 345 LKEW-ESSKNAFDFQVPNVLLTGYRQKGLLDKAETLLDGFLKKGKTPTSTS 394
>gi|125541465|gb|EAY87860.1| hypothetical protein OsI_09282 [Oryza sativa Indica Group]
Length = 517
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 142/290 (48%), Gaps = 2/290 (0%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M +H +F LS SD+ R++L+ KV G E Y+ L +A LLH Y +
Sbjct: 107 MDSHNDFRLSPSDHMVRLELIAKVHGTSQAEEYYRKLSTAASKKAASFPLLHCYVTERNV 166
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
+KAE +++ L + +NE+M LY++ Q EKV V+ +KR N+ ++ +YN+W
Sbjct: 167 QKAETFMAELQRYGLPVDPHSFNEIMKLYVATCQYEKVLSVIYLMKRNNIPRNVLSYNIW 226
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
+++CA + V+ EM D W Y L NI+ A + L AE
Sbjct: 227 MNACAEVSGLASVQSAFKEMLNDDMVEVGWSTYCTLANIFKKYGQSSKA-LACLRTAETK 285
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 240
++ + Y F++ YA L ++D + ++W++ ++ ++ + NY+ + + +G +
Sbjct: 286 LSSTGRLGYSFIMTCYAALNDRDGVIRLWEASKIVPGRIPAANYMSAMVCLIKVGDIGRA 345
Query: 241 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
W ++ + D+ N LLGA+ G EKA H+ +L+K P
Sbjct: 346 EWTFGSW-EAESKKHDVRVSNVLLGAYVRNGWIEKAERLHLHMLEKGAHP 394
>gi|223974825|gb|ACN31600.1| unknown [Zea mays]
Length = 515
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 92/279 (32%), Positives = 154/279 (55%), Gaps = 8/279 (2%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
MV + +S +++A R++L+ KV G+ + E YF LP AK TY +LL Y AK
Sbjct: 107 MVNARGMNMSHTNHAIRLELIYKVRGLEAAENYFANLPDPAKNHRTYGSLLSCYCSAKME 166
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
EKA L+ ++ + + + L N +M+LYM + Q KV + EE+K KNV P+ T +
Sbjct: 167 EKATNLYRQMDELGIWSSTLPINNLMSLYMKLDQYRKVVSLFEEMKLKNVKPNSLTCCIL 226
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
++S AA ID +++ L EM + + W Y L +IY+ A AES+ L + E
Sbjct: 227 MTSYAALNKIDDIEELLKEM-VEKDVTLGWSAYSTLASIYVNAGQFGKAESA-LKKLEGL 284
Query: 181 IT---QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHL 237
I+ RQ +DFL+ LYA LGN +++++W ++ K+T+ +Y+ +L + L +
Sbjct: 285 ISAHDDRQ--PFDFLLSLYASLGNLSEVNRVWNVIKSKFSKVTNTSYLGMLHALYKLNDI 342
Query: 238 KEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
+ +I +W +S FD+ N ++ + VG+TE+A
Sbjct: 343 DRMKQIYMEW-ESNYETFDVKLTNMMIRSHLKVGMTEEA 380
>gi|15217734|ref|NP_171739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173342|sp|Q9FZ24.1|PPR4_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g02370, mitochondrial; Flags: Precursor
gi|9857533|gb|AAG00888.1|AC064879_6 Hypothetical protein [Arabidopsis thaliana]
gi|332189300|gb|AEE27421.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 537
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 155/287 (54%), Gaps = 3/287 (1%)
Query: 5 KEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSE-TYTALLHLYAGAKWTEKA 63
++ S SD+A +DL+ K G+ + E YF L SAK + TY AL++ Y EKA
Sbjct: 132 RKMTFSVSDHAICLDLIGKTKGLEAAENYFNNLDPSAKNHQSTYGALMNCYCVELEEEKA 191
Query: 64 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 123
+ FE + + N N+L +N MM++YM + Q EKV ++V+ +K++ + P TY++W+ S
Sbjct: 192 KAHFEIMDELNFVNNSLPFNNMMSMYMRLSQPEKVPVLVDAMKQRGISPCGVTYSIWMQS 251
Query: 124 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQ 183
C + ++D ++K +DEM DS W + NL IY T + L S L E+ +
Sbjct: 252 CGSLNDLDGLEKIIDEMGKDSEAKTTWNTFSNLAAIY-TKAGLYEKADSALKSMEEKMNP 310
Query: 184 RQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI 243
++ FL+ LYAG+ ++ ++W+SL+ + ++ + +Y+ +L + LG L + +I
Sbjct: 311 NNRDSHHFLMSLYAGISKGPEVYRVWESLKKARPEVNNLSYLVMLQAMSKLGDLDGIKKI 370
Query: 244 IDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
+W +S +D+ N + + + E+A + ++K+ P
Sbjct: 371 FTEW-ESKCWAYDMRLANIAINTYLKGNMYEEAEKILDGAMKKSKGP 416
>gi|356510143|ref|XP_003523799.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Glycine max]
Length = 530
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 146/293 (49%), Gaps = 8/293 (2%)
Query: 3 THKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEK 62
K F + +DYA +++L+ + + + E YF LP SA LL Y + T K
Sbjct: 115 NQKNFHMIPADYAMKLELIIENYDLMEAEEYFMNLPDSAAKKAACLTLLRGYIRVRDTNK 174
Query: 63 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 122
AE ++ + L + +NEMM LY++ + KV LV++++KR V ++ +YNLW++
Sbjct: 175 AETFMVKLYELGLVLSPHPFNEMMKLYLATCEYRKVPLVMQQMKRNKVPCNVLSYNLWMN 234
Query: 123 SCAAT--LNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLV--EAE 178
+C + V+ +M D W L N Y A ++ + LV +AE
Sbjct: 235 ACTEEEGYGVAAVETVFRQMQNDRNVEVGWSSLATLANAYKKAGQ---SKKAILVLKDAE 291
Query: 179 KSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLK 238
+ ++ + Y FLI LYA L K+ + ++W++ + +++ NYICIL + LG +
Sbjct: 292 RKLSTCNRLGYFFLITLYASLKEKEGVLRLWEASKAVGGRISCANYICILICLVKLGDIV 351
Query: 239 EVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 291
+ I +W +S +DI N LLGA++ G E+A H+ LQK P
Sbjct: 352 QAKRIFLEW-ESNCQKYDIRVSNVLLGAYARNGSMEEAESLHLHTLQKGGCPN 403
>gi|356518447|ref|XP_003527890.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Glycine max]
Length = 496
Score = 144 bits (362), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 149/291 (51%), Gaps = 8/291 (2%)
Query: 4 HKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKA 63
K F + +D+A +++L+ + G+ E YF LP SA LL Y + T KA
Sbjct: 91 QKNFHMIPADHAMKLELIIENHGLMEAEEYFMNLPDSAAKKAACLILLRGYVRDRDTSKA 150
Query: 64 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 123
E ++ + L + +NEMM LY+ + KV LV++++KR + ++ +YNLW+++
Sbjct: 151 ETFMLKLYELGLVVSPHPFNEMMKLYLVTCEYRKVPLVIQQMKRNKIPCNVLSYNLWMNA 210
Query: 124 CAATLN--IDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLV--EAEK 179
C+ + V+ +M D W L N Y A ++ + LV +AEK
Sbjct: 211 CSEEEGYVVAAVETVFRQMLNDRNVEVGWGSLATLANAYKKAGQ---SKKAILVLKDAEK 267
Query: 180 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 239
++ + + FLI LYA L +K+ + ++W++ + + +++ NYICIL+ + LG + +
Sbjct: 268 KLSTCNRLGHFFLITLYASLKDKEGVLRLWEASKAVRGRISCANYICILTCLVKLGDIVQ 327
Query: 240 VGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
I +W +S +DI N LLGA+ GL E+A H+ LQK P
Sbjct: 328 AKRIFLEW-ESNCQKYDIRVSNVLLGAYVRNGLMEEAESLHLHTLQKGGCP 377
>gi|358344191|ref|XP_003636175.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
gi|355502110|gb|AES83313.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
Length = 790
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 154/290 (53%), Gaps = 2/290 (0%)
Query: 5 KEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAE 64
+ F +S SD A ++DL+ +V G+ S E +F L K TY ALL+ Y ++ EKAE
Sbjct: 306 ERFRISASDVAIQLDLIARVHGVSSAESFFLNLTNDLKDKRTYGALLNAYVHSRSREKAE 365
Query: 65 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 124
L E ++ ++L +N MMTL M++ +KV ++V E+K KN+ DI+TYN+W+SSC
Sbjct: 366 SLLEVMRSKRYLTHSLPFNLMMTLSMNLKDYDKVDMLVSEMKEKNIQLDIYTYNIWLSSC 425
Query: 125 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR 184
+ +I+++++ ++M D +W + + +YI L L +AE I R
Sbjct: 426 GSQGSIEKMEQVFEQMLKDPTIIPNWSTFSTMAAMYIKM-ELFEKAQECLKKAEGRILGR 484
Query: 185 QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEII 244
+ + +L+ LY +GNKD++ ++W + + + + Y ++SS++ + ++ ++
Sbjct: 485 DKVPFHYLLSLYGSVGNKDEVYRVWNNYKSMFPSIPNLGYHAVISSFVRMDDIERAEKLY 544
Query: 245 DQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
++W SD D N L+ + G ++K F + + P + +
Sbjct: 545 EEWVSVRPSD-DSRIGNLLISWYLKKGKSDKVFSFFKHMSEGGGCPNSTT 593
>gi|449438086|ref|XP_004136821.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 486
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 150/282 (53%), Gaps = 4/282 (1%)
Query: 10 SDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFER 69
S A ++ L++K G+ E YF + S++ + Y ALLH Y K +KAE + ++
Sbjct: 103 SPGHIAIQLHLISKARGLEQAEEYFSSIGESSRDHKVYGALLHCYVENKNLKKAEAIMQK 162
Query: 70 VKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLN 129
+++ L YN M+ LY +G+ EK+ +V+E++ + + FTYN+ +++ AA +
Sbjct: 163 MREVGFMKTPLSYNAMLNLYAQLGKHEKLDELVKEMEEMGIGHNRFTYNVRMNAYAAASD 222
Query: 130 IDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQ-WIT 188
I ++K L +M D + DW Y + N Y A L S L +AE+ I +Q W+
Sbjct: 223 ITNMEKLLSKMEADPLVATDWHIYFTVGNGYFKAG-LSENSISMLKKAEQLIGDKQKWLA 281
Query: 189 YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK 248
Y +L+ LYA +GNKD++ ++W +L QK + Y+CI+SS + L + I+ +W+
Sbjct: 282 YQYLMTLYAAIGNKDEVYRVW-NLYTNLQKRFNSGYLCIISSLMKLDDIDGAERILKEWE 340
Query: 249 QSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
TS FD N ++ ++ G +KA + L++ P
Sbjct: 341 SGDTS-FDFKIPNMMINSYCTKGFVDKAEAYISRLIENGKEP 381
>gi|224121672|ref|XP_002330624.1| predicted protein [Populus trichocarpa]
gi|222872228|gb|EEF09359.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/272 (32%), Positives = 151/272 (55%), Gaps = 4/272 (1%)
Query: 9 LSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFE 68
LS D A R+DL++KV G+ YF +P S + E Y ALL+ YA K E+AE
Sbjct: 99 LSPGDVAVRLDLISKVHGLEQAVTYFNSVPESLRGLEVYGALLNCYAHYKHLEEAEATMR 158
Query: 69 RVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATL 128
++++ N L YN M+ LY +G+ EK+ ++++E+++ + TY + +++ AT
Sbjct: 159 KMREMGFVRNVLSYNVMLNLYYQMGKYEKIQVLMQEMEKWGICFSNITYKILLNAYVATS 218
Query: 129 NIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQ-WI 187
NI+++KK L +M D S DW YV N Y+ A L++ + L +E+ I+ +
Sbjct: 219 NIEEIKKILMKMEADPLVSIDWYAYVVAANGYLKAG-LIDKTLTMLWRSEQLISGKSARF 277
Query: 188 TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQW 247
+ L+ LY +GNK+++ ++W +L TK + + +Y+C+++S L L + I ++W
Sbjct: 278 ACETLLSLYTAVGNKEQVYRVW-NLYKTKGRSLNSSYLCMINSLLKLDDVDGAERIWEEW 336
Query: 248 KQSATSDFDISACNRLLGAFSDVGLTEKANEF 279
S FDI N ++ A+S GL EKA F
Sbjct: 337 -VSIVKFFDIRIPNVMVSAYSKKGLWEKAEAF 367
>gi|226502666|ref|NP_001140872.1| uncharacterized protein LOC100272948 [Zea mays]
gi|194701536|gb|ACF84852.1| unknown [Zea mays]
gi|413924212|gb|AFW64144.1| hypothetical protein ZEAMMB73_253479 [Zea mays]
Length = 525
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 139/282 (49%), Gaps = 2/282 (0%)
Query: 9 LSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFE 68
LS D+A R+DL+ K + E Y+ L A LLH Y + +KAE
Sbjct: 120 LSSWDHAARLDLIAKAYSTSQAEEYYNKLQSPATRQAASFPLLHCYVMERDVQKAETFMA 179
Query: 69 RVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATL 128
+++ L + +NE+M LY++ Q EKV V++ +KR N+ ++ +YNLW+++CA
Sbjct: 180 QLQSHGLPVDPHSFNEIMKLYVATCQYEKVLSVIDLMKRNNIHRNVLSYNLWMNACAEVS 239
Query: 129 NIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWIT 188
+D V+ M D W Y L NI+ + L N + LV+AE ++ +
Sbjct: 240 GVDSVQSVFQVMLNDETVKVGWSTYCTLANIF-RKNGLNNEAQACLVKAEAKLSPAGRLG 298
Query: 189 YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK 248
Y F++ YA L + D + ++W++ + ++ + Y+ +S + +G + + I +W
Sbjct: 299 YSFVMTCYAALNDSDGVMRMWEASKSVPGRIPTAYYMAAMSCSIKVGDISQAECIFGKW- 357
Query: 249 QSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
++ D+ N LLGA+ EKA H+ +L+K P
Sbjct: 358 EAGCRKHDVRVSNVLLGAYVRNRWIEKAERLHLHMLEKGACP 399
>gi|224121680|ref|XP_002330626.1| predicted protein [Populus trichocarpa]
gi|222872230|gb|EEF09361.1| predicted protein [Populus trichocarpa]
Length = 441
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/274 (32%), Positives = 152/274 (55%), Gaps = 8/274 (2%)
Query: 10 SDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFER 69
S D+A R+DL++KV G+ E Y+ +P + ++ Y ALL+ YA + EKAE ++
Sbjct: 71 SPGDFAVRLDLISKVHGLEQAEEYYNSIPDHLRGTQVYGALLNCYAHKRRLEKAEATMQK 130
Query: 70 VKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLN 129
+++ L L YN M++LY +G+ EK+ +V+E++ K V DI+T+N+ + + AT N
Sbjct: 131 MRELGL-VQTLSYNVMLSLYSHMGRYEKLEALVKEMEEKGVNSDIYTFNIRLHAYVATSN 189
Query: 130 IDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWIT- 188
I++++K L +M DS + D+ + + N Y+ A L+ L AE+ T
Sbjct: 190 IEEMEKLLMKMETDSLINIDFHTFFAVANGYLKAG-LLEKSIVMLKRAEELTVPMVGTTK 248
Query: 189 ---YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIID 245
Y+ L+ LY GNKD + ++W S + T + S YIC+++S + LG + I +
Sbjct: 249 AHAYEMLLTLYGSAGNKDGVYRVWNSYKNTGRIFNS-TYICMINSLMRLGDIDGAEWISE 307
Query: 246 QWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 279
+W T +DI N ++ A+S GL +KA E+
Sbjct: 308 EWVSRKTL-YDIRIPNTMIRAYSRKGLWKKAEEY 340
>gi|4558568|gb|AAD22661.1|AC007138_25 hypothetical protein [Arabidopsis thaliana]
gi|7268583|emb|CAB80692.1| hypothetical protein [Arabidopsis thaliana]
Length = 501
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 140/273 (51%), Gaps = 2/273 (0%)
Query: 4 HKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKA 63
KE + SD+A R++L+ K G+ + E YF L S K TY +LL+ Y K KA
Sbjct: 99 RKEIAFTGSDHAIRLNLIAKSKGLEAAETYFNSLDDSIKNQSTYGSLLNCYCVEKEEVKA 158
Query: 64 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 123
+ FE + N N+L +N +M +YM +GQ EKV +V +K K++ P TY++WI S
Sbjct: 159 KAHFENMVDLNHVSNSLPFNNLMAMYMGLGQPEKVPALVVAMKEKSITPCDITYSMWIQS 218
Query: 124 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQ 183
C + ++D V+K LDEM + G W + NL IYI AE + L E ++
Sbjct: 219 CGSLKDLDGVEKVLDEMKAEGEGIFSWNTFANLAAIYIKVGLYGKAEEA-LKSLENNMNP 277
Query: 184 RQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI 243
Y FLI LY G+ N ++ ++W L+ + + +Y+ +L + L + V ++
Sbjct: 278 DVRDCYHFLINLYTGIANASEVYRVWDLLKKRYPNVNNSSYLTMLRALSKLDDIDGVKKV 337
Query: 244 IDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
+W +S +D+ N + ++ + E+A
Sbjct: 338 FAEW-ESTCWTYDMRMANVAISSYLKQNMYEEA 369
>gi|18411800|ref|NP_567220.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75163252|sp|Q93WC5.1|PP300_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g01990, mitochondrial; Flags: Precursor
gi|14517494|gb|AAK62637.1| AT4g01990/T7B11_26 [Arabidopsis thaliana]
gi|16323354|gb|AAL15390.1| AT4g01990/T7B11_26 [Arabidopsis thaliana]
gi|332656708|gb|AEE82108.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 502
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 140/273 (51%), Gaps = 2/273 (0%)
Query: 4 HKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKA 63
KE + SD+A R++L+ K G+ + E YF L S K TY +LL+ Y K KA
Sbjct: 100 RKEIAFTGSDHAIRLNLIAKSKGLEAAETYFNSLDDSIKNQSTYGSLLNCYCVEKEEVKA 159
Query: 64 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 123
+ FE + N N+L +N +M +YM +GQ EKV +V +K K++ P TY++WI S
Sbjct: 160 KAHFENMVDLNHVSNSLPFNNLMAMYMGLGQPEKVPALVVAMKEKSITPCDITYSMWIQS 219
Query: 124 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQ 183
C + ++D V+K LDEM + G W + NL IYI AE + L E ++
Sbjct: 220 CGSLKDLDGVEKVLDEMKAEGEGIFSWNTFANLAAIYIKVGLYGKAEEA-LKSLENNMNP 278
Query: 184 RQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI 243
Y FLI LY G+ N ++ ++W L+ + + +Y+ +L + L + V ++
Sbjct: 279 DVRDCYHFLINLYTGIANASEVYRVWDLLKKRYPNVNNSSYLTMLRALSKLDDIDGVKKV 338
Query: 244 IDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
+W +S +D+ N + ++ + E+A
Sbjct: 339 FAEW-ESTCWTYDMRMANVAISSYLKQNMYEEA 370
>gi|242057165|ref|XP_002457728.1| hypothetical protein SORBIDRAFT_03g012450 [Sorghum bicolor]
gi|241929703|gb|EES02848.1| hypothetical protein SORBIDRAFT_03g012450 [Sorghum bicolor]
Length = 530
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 92/281 (32%), Positives = 151/281 (53%), Gaps = 12/281 (4%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
MV + +S +++A R+DL+ KV G+ + E YF LP AK TY ALL Y AK
Sbjct: 123 MVNARGMNMSITNHAIRLDLIYKVRGLEAAENYFANLPDPAKNHRTYGALLSCYCSAKME 182
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
EKA L+ ++ + L N +M+LYM + Q KV + EE+K KN+ PD T +
Sbjct: 183 EKATYLYRQMDELGFWSGTLPINNLMSLYMKLDQHRKVDSLFEEMKVKNIKPDSLTCCIL 242
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESS-----TLV 175
++S AA+ ID +++ L EM + S W Y L +IY+ A + AES+ L+
Sbjct: 243 MTSYAASNKIDAIEELLKEM-VEKDVSLGWSAYSTLASIYVNAGQVEKAESALKKLEGLI 301
Query: 176 EAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLG 235
AE RQ +DFL+ LYA LGN +I+++W ++ +T+ +Y+ +L + L
Sbjct: 302 GAEDG---RQ--PFDFLMSLYASLGNLSEINRVWDVIKAKFSTVTNISYLGMLHALYKLN 356
Query: 236 HLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
+ + +I +W +S +D+ N ++ +G++E+A
Sbjct: 357 DIDRMKQIYMEW-ESNYQTYDVRLTNMMIRGHLRLGMSEEA 396
>gi|297808773|ref|XP_002872270.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318107|gb|EFH48529.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 492
Score = 140 bits (353), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 147/296 (49%), Gaps = 10/296 (3%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKT----SETYTALLHLYAG 56
M KE S D + R++L+ K G+ E YFE L S+ + Y LL Y
Sbjct: 93 MENQKEIQFSVYDISLRLELIIKTHGLKQAEEYFEKLLNSSASLRVAKSAYLPLLRSYVK 152
Query: 57 AKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFT 116
K ++ E E++ +NEMM LY + GQ EKV +VV +K + ++ +
Sbjct: 153 KKMVKEGEVFMEKLNGLGFLVTPHPFNEMMKLYEASGQYEKVVMVVSMMKVNKIPRNVLS 212
Query: 117 YNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLV- 175
YNLW+++C + V+ EM D W L N+YI E + LV
Sbjct: 213 YNLWMNACCQVSGVTAVETVYREMVGDKSVEVGWSSLCTLANVYIKGGF---DEKAKLVL 269
Query: 176 -EAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLML 234
AEK + + + Y FLI LYA LG+K+ + ++W++ ++ +++ NYIC+LSS + +
Sbjct: 270 ENAEKLLNRSNRLGYFFLITLYASLGDKEGVVRLWEASKLVCGRISCANYICVLSSLVKI 329
Query: 235 GHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
G L+E + ++W ++ ++D+ N LLGA+ G KA H +L++ P
Sbjct: 330 GDLEEAERVFNEW-EAQCFNYDVRVSNVLLGAYMRNGEIRKAESLHARVLERGGNP 384
>gi|125559056|gb|EAZ04592.1| hypothetical protein OsI_26742 [Oryza sativa Indica Group]
Length = 402
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 149/283 (52%), Gaps = 4/283 (1%)
Query: 13 DYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQ 72
D+A +DL+ ++ G + E YF LP KT + Y ALL+ Y EK+ F+++K+
Sbjct: 13 DHAVHLDLIGEIHGSSAAETYFNNLPDKDKTEKPYGALLNCYTRELLVEKSLAHFQKMKE 72
Query: 73 SNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQ 132
F+ L YN +M LY ++GQ EKV V+ E+K +VPD F+Y + I+S +
Sbjct: 73 LGFVFSTLPYNNIMGLYTNLGQHEKVPSVIAEMKSNGIVPDNFSYRICINSYGTRADFFG 132
Query: 133 VKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFL 192
++ L+EM C+ DW Y + + YI ++ S L +AE I + +Y+ L
Sbjct: 133 MENTLEEMECEPKIVVDWNTYAVVASNYIKG-NIREKAFSALKKAEAKINIKDSDSYNHL 191
Query: 193 IILYAGLGNKDKIDQIWKSLRMTK-QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 251
I LY LG+K +++++W +L+M+ + +++Y +L+ + L ++E ++ +W+ S
Sbjct: 192 ISLYGHLGDKSEVNRLW-ALQMSNCNRHINKDYTTMLAVLVKLNEIEEAEVLLKEWESSG 250
Query: 252 TSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
+ FD N LL + L +KA L+K P + S
Sbjct: 251 NA-FDFQVPNVLLTGYRQKDLLDKAEALLDDFLKKGKMPPSTS 292
>gi|115473169|ref|NP_001060183.1| Os07g0598500 [Oryza sativa Japonica Group]
gi|34393591|dbj|BAC83218.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|113611719|dbj|BAF22097.1| Os07g0598500 [Oryza sativa Japonica Group]
gi|215706491|dbj|BAG93347.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 506
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 153/292 (52%), Gaps = 6/292 (2%)
Query: 4 HKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKA 63
H +F+ D+A +DL+ ++ G + E YF LP KT + Y ALL+ Y EK+
Sbjct: 127 HVKFL--PKDHAVHLDLIGEIHGSSAAETYFNNLPDKDKTEKPYGALLNCYTRELLVEKS 184
Query: 64 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 123
F+++K+ F+ L YN +M LY ++GQ EKV V+ E+K +VPD F+Y + I+S
Sbjct: 185 LAHFQKMKELGFVFSTLPYNNIMGLYTNLGQHEKVPSVIAEMKSNGIVPDNFSYRICINS 244
Query: 124 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQ 183
+ ++ L+EM C+ DW Y + + YI + + S L +AE I
Sbjct: 245 YGTRADFFGMENTLEEMECEPKIVVDWNTYAVVASNYIKGN-IREKAFSALKKAEAKINI 303
Query: 184 RQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK-QKMTSRNYICILSSYLMLGHLKEVGE 242
+ +Y+ LI LY LG+K +++++W +L+M+ + +++Y +L+ + L ++E
Sbjct: 304 KDSDSYNHLISLYGHLGDKSEVNRLW-ALQMSNCNRHINKDYTTMLAVLVKLNEIEEAEV 362
Query: 243 IIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
++ +W+ S + FD N LL + L +KA L+K P + S
Sbjct: 363 LLKEWESSGNA-FDFQVPNVLLTGYRQKDLLDKAEALLDDFLKKGKMPPSTS 413
>gi|222637397|gb|EEE67529.1| hypothetical protein OsJ_24995 [Oryza sativa Japonica Group]
Length = 491
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 153/292 (52%), Gaps = 6/292 (2%)
Query: 4 HKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKA 63
H +F+ D+A +DL+ ++ G + E YF LP KT + Y ALL+ Y EK+
Sbjct: 112 HVKFL--PKDHAVHLDLIGEIHGSSAAETYFNNLPDKDKTEKPYGALLNCYTRELLVEKS 169
Query: 64 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 123
F+++K+ F+ L YN +M LY ++GQ EKV V+ E+K +VPD F+Y + I+S
Sbjct: 170 LAHFQKMKELGFVFSTLPYNNIMGLYTNLGQHEKVPSVIAEMKSNGIVPDNFSYRICINS 229
Query: 124 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQ 183
+ ++ L+EM C+ DW Y + + YI + + S L +AE I
Sbjct: 230 YGTRADFFGMENTLEEMECEPKIVVDWNTYAVVASNYIKGN-IREKAFSALKKAEAKINI 288
Query: 184 RQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK-QKMTSRNYICILSSYLMLGHLKEVGE 242
+ +Y+ LI LY LG+K +++++W +L+M+ + +++Y +L+ + L ++E
Sbjct: 289 KDSDSYNHLISLYGHLGDKSEVNRLW-ALQMSNCNRHINKDYTTMLAVLVKLNEIEEAEV 347
Query: 243 IIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
++ +W+ S + FD N LL + L +KA L+K P + S
Sbjct: 348 LLKEWESSGNA-FDFQVPNVLLTGYRQKDLLDKAEALLDDFLKKGKMPPSTS 398
>gi|242066836|ref|XP_002454707.1| hypothetical protein SORBIDRAFT_04g035970 [Sorghum bicolor]
gi|241934538|gb|EES07683.1| hypothetical protein SORBIDRAFT_04g035970 [Sorghum bicolor]
Length = 527
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 138/290 (47%), Gaps = 2/290 (0%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M + +LS D+A R+DL+ K +G E Y+ L A LLH Y +
Sbjct: 114 MESCNSVLLSSWDHAARLDLIAKAYGTSQAEEYYNKLQSPAARQAASFPLLHCYVTERNV 173
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
+KAE +++ L + +NE+M LY++ Q EK V++ +KR N+ ++ +YNLW
Sbjct: 174 QKAETFMAQLQSCGLPVDPHSFNEIMKLYIATFQYEKALSVIDLMKRNNIPRNVLSYNLW 233
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
++ CA + V+ EM D W Y L NI+ + L + L +AE
Sbjct: 234 MNVCAEVSGVAPVQSVFQEMLNDETVEVGWSTYCTLANIF-RKNGLNTKAQACLRKAETK 292
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 240
++ + Y F++ YA L + D + ++W++ + ++ + NY+ + + +G + +
Sbjct: 293 LSPTGRLGYSFVMTCYAALNDSDGVMRLWEASKSVPGRIPAANYMTAMLCSIKVGDISQA 352
Query: 241 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
I W ++ D+ N LLGA+ EKA H+ +L+K P
Sbjct: 353 EWIFGSW-EAGCRKHDVRVSNVLLGAYVRNRWIEKAERLHLHMLEKGARP 401
>gi|223949005|gb|ACN28586.1| unknown [Zea mays]
Length = 396
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 140/282 (49%), Gaps = 2/282 (0%)
Query: 13 DYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQ 72
D+A +DL+ ++ G+ + E YF L KT + Y ALL+ Y +KA F +K+
Sbjct: 13 DHAIHLDLIGQIHGVEAAETYFNNLSDKDKTEKPYGALLNCYTRELLVDKALAHFRNMKE 72
Query: 73 SNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQ 132
F+ L YN++M LY +GQ E+V V+ E+K +VPD F+Y + I+S +
Sbjct: 73 LGFVFSTLPYNDLMGLYTRIGQHERVPSVMAEMKSNGIVPDNFSYRICINSYGTRADFFG 132
Query: 133 VKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFL 192
++ L+EM C+ DW Y + + YI L S L +AE + ++ Y L
Sbjct: 133 LENTLEEMECEPQIVVDWNTYAVVASNYIKGD-LREKAYSALSKAEAKLDKQDPDAYRHL 191
Query: 193 IILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSAT 252
I LY LG+K + ++W ++ +R+Y+ +LS + L + E +++ +W+ S
Sbjct: 192 ISLYGNLGDKSEAKRLWAVQMSNCKRYINRDYMNMLSVLVKLDEITEAEDLLKEWESSQN 251
Query: 253 SDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
S FD N LL + L +KA L+K P + S
Sbjct: 252 S-FDFRVPNVLLTGYRQKALLDKAEMLLDGFLKKGKTPPSTS 292
>gi|449523946|ref|XP_004168984.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 461
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 152/278 (54%), Gaps = 6/278 (2%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M + F LS +D A R++L+ +V G+ E YF+ +P K + + ALL+ YA K
Sbjct: 87 MSDKRYFPLSTADIAIRMNLILRVHGLEQVEDYFDNMPSQLKRYQVHIALLNCYAHEKCV 146
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
+KA +++K+ + + L YN MM LY +G+ E++ +++E+K + V D FTY++
Sbjct: 147 DKANAFMQKIKEMGFANSPLPYNIMMNLYHQIGEFERLDSLLKEMKERGVYYDRFTYSIR 206
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
IS+ AA + ++K +++M + DW YV N Y L++ S L ++E
Sbjct: 207 ISAYAAASDFRGIEKIMEQMESNPSIVLDWNCYVIAANAY-NKVGLIDKSISMLKKSEGL 265
Query: 181 I--TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLK 238
+ +++ ++ + LYA G KD+I +IW + K+K+ ++ +I +++S L+L +K
Sbjct: 266 LANVKKKGFAFNVYLKLYARNGKKDEIHRIWNLYK--KEKIFNKGFISMITSLLILDDIK 323
Query: 239 EVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
I +W+ S +D+ N L+ A+ GL EKA
Sbjct: 324 GAERIYKEWETRKLS-YDLRIPNLLVDAYCRAGLMEKA 360
>gi|293331503|ref|NP_001168643.1| uncharacterized protein LOC100382430 [Zea mays]
gi|223949857|gb|ACN29012.1| unknown [Zea mays]
gi|413933913|gb|AFW68464.1| hypothetical protein ZEAMMB73_255812 [Zea mays]
Length = 500
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 144/291 (49%), Gaps = 4/291 (1%)
Query: 4 HKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKA 63
H +F+ D+A +DL+ ++ G+ + E YF L KT + Y ALL+ Y +KA
Sbjct: 110 HVKFL--PKDHAIHLDLIGQIHGVEAAETYFNNLSDKDKTEKPYGALLNCYTRELLVDKA 167
Query: 64 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 123
F +K+ F+ L YN++M LY +GQ E+V V+ E+K +VPD F+Y + I+S
Sbjct: 168 LAHFRNMKELGFVFSTLPYNDLMGLYTRIGQHERVPSVMAEMKSNGIVPDNFSYRICINS 227
Query: 124 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQ 183
+ ++ L+EM C+ DW Y + + YI L S L +AE + +
Sbjct: 228 YGTRADFFGLENTLEEMECEPQIVVDWNTYAVVASNYIKGD-LREKAYSALSKAEAKLDK 286
Query: 184 RQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI 243
+ Y LI LY LG+K + ++W ++ +R+Y+ +LS + L + E ++
Sbjct: 287 QDPDAYRHLISLYGNLGDKSEAKRLWAVQMSNCKRYINRDYMNMLSVLVKLDEITEAEDL 346
Query: 244 IDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
+ +W+ S S FD N LL + L +KA L+K P + S
Sbjct: 347 LKEWESSQNS-FDFRVPNVLLTGYRQKALLDKAEMLLDGFLKKGKTPPSTS 396
>gi|326530906|dbj|BAK01251.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 511
Score = 137 bits (344), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 150/283 (53%), Gaps = 4/283 (1%)
Query: 13 DYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQ 72
DYA +DL+ +V GI + E YF LP KT + Y ALL+ Y + + F+++K+
Sbjct: 128 DYAVHLDLIGQVHGIGAAEAYFNTLPDKDKTEKPYGALLNCYTRELMVDGSLAHFQKMKE 187
Query: 73 SNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQ 132
F++L YN +M LY ++GQ EKV V+ E+K ++PD F+Y + I+S +
Sbjct: 188 LGFVFSSLPYNNLMGLYTNIGQHEKVPSVIAEMKGSGIMPDNFSYRICINSYGTRADFFG 247
Query: 133 VKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFL 192
++ L++M C+ DW Y + + YI + L S L +AE I + TY+ L
Sbjct: 248 MENTLEDMECEPQIVVDWNTYAVVASNYIKGN-LREKAISALKKAEAKIDIKDSDTYNHL 306
Query: 193 IILYAGLGNKDKIDQIWKSLRMTK-QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 251
I LY LG+K ++ ++W L+M+ ++ +++Y +L+ + L ++E ++ +W +S+
Sbjct: 307 ISLYGQLGDKSEMRRLW-GLQMSNCKRHINKDYTTMLAMLVRLDEIEEAEALLKEW-ESS 364
Query: 252 TSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
+ FD N LL + + +KA L+K P + S
Sbjct: 365 ENAFDFHVPNVLLTGYRHKDMLDKAEALLDDFLKKGKMPPSTS 407
>gi|224138178|ref|XP_002322749.1| predicted protein [Populus trichocarpa]
gi|222867379|gb|EEF04510.1| predicted protein [Populus trichocarpa]
Length = 505
Score = 136 bits (343), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 148/285 (51%), Gaps = 3/285 (1%)
Query: 7 FVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEEL 66
F L+ D A ++DL++KV GI ++ F P K + Y+ALL+ YA AK EKAE +
Sbjct: 123 FELASQDVAVQLDLISKVHGIEQAQKLFNNTPQHLKVLKVYSALLNCYAKAKLVEKAESV 182
Query: 67 FERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAA 126
+ +K + L+YN ++ Y G +K+ +++E+++ + D F +++ +S+ A+
Sbjct: 183 VQEMKSLGFANTLLVYNVILNFYYQTGNPDKINSLMQEMEQNGIGCDKFAHSIQLSAYAS 242
Query: 127 TLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT-QRQ 185
+I ++K L +M D DW Y YI LV+ L ++E+ +T +R+
Sbjct: 243 VSDIVGIEKTLAKMESDPNVFLDWTSYTAAAKGYIKVG-LVDKALEMLEKSERLVTGKRR 301
Query: 186 WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIID 245
YD LI LYA G +++ +IW+ L +K+ YI I++S L L + +I +
Sbjct: 302 GTAYDSLITLYAATGKTNEVLRIWE-LYKKNEKVYKEAYISIITSLLKLDDFENAEKIFE 360
Query: 246 QWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
+W+ S +DI N L+ A+S GL EKA + K P
Sbjct: 361 EWEFQNHSCYDIHIPNFLIDAYSRKGLVEKAETLIDRAISKGGEP 405
>gi|242096946|ref|XP_002438963.1| hypothetical protein SORBIDRAFT_10g029040 [Sorghum bicolor]
gi|241917186|gb|EER90330.1| hypothetical protein SORBIDRAFT_10g029040 [Sorghum bicolor]
Length = 502
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 146/291 (50%), Gaps = 4/291 (1%)
Query: 4 HKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKA 63
H +F+ D+A +DL+ + G+ + E YF L KT + Y ALL+ Y + +KA
Sbjct: 114 HVKFL--PKDHAVHLDLIGHIHGVGAAETYFNNLSDKDKTEKPYGALLNCYTRERLVDKA 171
Query: 64 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 123
F+++K+ F AL YN +M+LY ++ Q E+V V+ E+K +VPD F+Y + I+S
Sbjct: 172 LAHFQKMKELGFVFTALPYNNLMSLYTNIEQHERVPSVMAEMKSNGIVPDNFSYRICINS 231
Query: 124 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQ 183
+ ++ L+EM C+ DW Y + + YI L S L +AE +
Sbjct: 232 YGTRADFFGLENTLEEMECEPQIVVDWNTYTVVASQYIKGD-LREKAYSALKKAEAKMGI 290
Query: 184 RQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI 243
+ Y LI LY LG+K ++ ++W Q+ + +Y IL+ + L + E ++
Sbjct: 291 KDLAAYRHLISLYGHLGDKSEVKRLWAVQMSNCQRHLNTDYTNILAVLVKLDEIAEAEDL 350
Query: 244 IDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
+ +W +++ ++FD N LL + GL +KA L K P + S
Sbjct: 351 LKEW-ETSKNEFDFKVPNVLLTWYCQKGLLDKAEALLDGFLIKGKMPPSTS 400
>gi|22328859|ref|NP_680735.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75146702|sp|Q84JR3.1|PP334_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g21705, mitochondrial; Flags: Precursor
gi|28393142|gb|AAO42004.1| unknown protein [Arabidopsis thaliana]
gi|28827500|gb|AAO50594.1| unknown protein [Arabidopsis thaliana]
gi|332659092|gb|AEE84492.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 492
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 148/287 (51%), Gaps = 2/287 (0%)
Query: 8 VLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELF 67
V S +++A +DL+ +V+G + E YFE L K +TY ALL+ Y + EK+ F
Sbjct: 90 VFSPTEHAVHLDLIGRVYGFVTAEEYFENLKEQYKNDKTYGALLNCYVRQQNVEKSLLHF 149
Query: 68 ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAAT 127
E++K+ ++L YN +M LY ++GQ EKV V+EE+K +NV PD ++Y + I++ A
Sbjct: 150 EKMKEMGFVTSSLTYNNIMCLYTNIGQHEKVPKVLEEMKEENVAPDNYSYRICINAFGAM 209
Query: 128 LNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWI 187
+++++ L +M + DW Y YI A L +E + ++
Sbjct: 210 YDLERIGGTLRDMERRQDITMDWNTYAVAAKFYIDGGDCDRA-VELLKMSENRLEKKDGE 268
Query: 188 TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQW 247
Y+ LI LYA LG K ++ ++W + ++ +++Y+ +L S + + L E E++ +W
Sbjct: 269 GYNHLITLYARLGKKIEVLRLWDLEKDVCKRRINQDYLTVLQSLVKIDALVEAEEVLTEW 328
Query: 248 KQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
K S +D N ++ + + EKA L ++ A T S
Sbjct: 329 KSSGNC-YDFRVPNTVIRGYIGKSMEEKAEAMLEDLARRGKATTPES 374
>gi|255647669|gb|ACU24296.1| unknown [Glycine max]
Length = 484
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 137/242 (56%), Gaps = 3/242 (1%)
Query: 12 SDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVK 71
S+YA ++DL++K G+ + E +F GLP AK TY ALL+ Y +KA F+ +
Sbjct: 96 SNYAVQLDLVSKTKGVDAAENFFGGLPPPAKNRYTYGALLNCYCKELMKDKALSHFDTMD 155
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
+ N L +N +MTL+M +G+ +KV +VE +K++ + FTY++W++SCA++ ++
Sbjct: 156 ELGYVTN-LAFNNVMTLFMKLGEPQKVPQLVELMKKRTIPMSPFTYHIWMNSCASSNDLG 214
Query: 132 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 191
++ +EM ++ G W Y NL +IY+ AE L E+ + +Q Y
Sbjct: 215 GAERVYEEMKTENEGQIGWHTYSNLASIYVKFKDFEKAE-MMLKMLEEQVKPKQRDAYHC 273
Query: 192 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 251
L+ LYAG GN ++ ++W SL+ + +T+ +Y+ +LS+ L ++ + + +W+ S
Sbjct: 274 LLGLYAGTGNLGEVHRVWDSLK-SVSPVTNFSYLVMLSTLRRLNDMEGLTKCFKEWEASC 332
Query: 252 TS 253
S
Sbjct: 333 VS 334
>gi|115436132|ref|NP_001042824.1| Os01g0301700 [Oryza sativa Japonica Group]
gi|14495231|dbj|BAB60950.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|113532355|dbj|BAF04738.1| Os01g0301700 [Oryza sativa Japonica Group]
gi|125525550|gb|EAY73664.1| hypothetical protein OsI_01547 [Oryza sativa Indica Group]
gi|125570062|gb|EAZ11577.1| hypothetical protein OsJ_01442 [Oryza sativa Japonica Group]
gi|215713519|dbj|BAG94656.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 504
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 142/263 (53%), Gaps = 4/263 (1%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQS 73
+A R+DL++K+ GIH+ E YF LP ++ +TY+ LL+ YA + EK EL+E +K
Sbjct: 110 HALRLDLVSKLNGIHAAEEYFGSLPDIFRSKQTYSTLLNCYAEHRMAEKGLELYENMKAM 169
Query: 74 NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQV 133
N+ + L+YN +M LY+ Q EK+ V +++ + P+ F+Y + S +I+
Sbjct: 170 NIVSDILVYNNLMCLYLKTDQPEKIPTTVVKMQESGIQPNKFSYFVLTESYIMMNDIESA 229
Query: 134 KKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLI 193
+K L E+ S W Y L N Y AE TL +AE+ + + ++ L+
Sbjct: 230 EKVLKELQ--EVNSVPWSLYATLANGYNKLQQFDKAE-FTLKKAEEVLDKHDVFSWHCLL 286
Query: 194 ILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATS 253
YA GN ++ +IW+SL+ +K T+R+Y+ +L + L + +I +W +S+
Sbjct: 287 SHYANSGNLSEVKRIWESLKSAFKKCTNRSYLVMLKALKKLDDFDTLQQIFQEW-ESSHE 345
Query: 254 DFDISACNRLLGAFSDVGLTEKA 276
+D+ N ++ A+ D G+ +KA
Sbjct: 346 HYDMKIPNIIIQAYLDKGMVDKA 368
>gi|356536682|ref|XP_003536865.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g02370, mitochondrial-like [Glycine max]
Length = 593
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 137/242 (56%), Gaps = 3/242 (1%)
Query: 12 SDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVK 71
S+YA ++DL++K G+ + E +F GLP AK TY ALL+ Y +KA F+ +
Sbjct: 96 SNYAVQLDLVSKTKGVDAAENFFGGLPPPAKNRYTYGALLNCYCKELMKDKALSHFDTMD 155
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
+ N L +N +MTL+M +G+ +KV +VE +K++ + FTY++W++SCA++ ++
Sbjct: 156 ELGYVTN-LAFNNVMTLFMKLGEPQKVPQLVELMKKRTIPMSPFTYHIWMNSCASSNDLG 214
Query: 132 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 191
++ +EM ++ G W Y NL +IY+ AE L E+ + +Q Y
Sbjct: 215 GAERVYEEMKTENEGQIGWHTYSNLASIYVKFKDFEKAE-MMLKMLEEQVKPKQRDAYHC 273
Query: 192 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 251
L+ LYAG GN ++ ++W SL+ + +T+ +Y+ +LS+ L ++ + + +W+ S
Sbjct: 274 LLGLYAGTGNLGEVHRVWDSLK-SVSPVTNFSYLVMLSTLRRLNDMEGLTKCFKEWEASC 332
Query: 252 TS 253
S
Sbjct: 333 VS 334
>gi|297799892|ref|XP_002867830.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313666|gb|EFH44089.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 492
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 145/269 (53%), Gaps = 2/269 (0%)
Query: 8 VLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELF 67
V S +++A +DL+ +V+G + E YFE L K +TY ALL+ Y + EK+ F
Sbjct: 90 VFSPTEHAVHLDLIGRVYGFVTAEEYFENLKEQYKNEKTYGALLNCYVRQQNVEKSLLHF 149
Query: 68 ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAAT 127
+++K+ ++L YN +M LY ++GQ EKV V++E+K +NV PD +++ + I++ A
Sbjct: 150 QKMKEMGFVSSSLTYNNIMCLYTNIGQHEKVPGVLDEMKEENVAPDNYSFRICINAFGAM 209
Query: 128 LNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWI 187
+++++ L +M + DW Y YI A L +E + ++
Sbjct: 210 SDLERIGGILRDMERRPDFTMDWNTYAVAAKFYIDGGDCDRA-VELLKMSEYRLEKKDGE 268
Query: 188 TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQW 247
Y+ LI LYA LGNK ++ ++W+ + ++ +++Y+ +L S + + LKE ++ +W
Sbjct: 269 GYNHLITLYARLGNKIEVLRLWELEKEACKRRINQDYLTVLQSLMKIDGLKEAEVVLTEW 328
Query: 248 KQSATSDFDISACNRLLGAFSDVGLTEKA 276
+ S +D N ++ ++ + EKA
Sbjct: 329 ESSGNC-YDFRVPNTVIRGYTGKSMEEKA 356
>gi|224138182|ref|XP_002322750.1| predicted protein [Populus trichocarpa]
gi|222867380|gb|EEF04511.1| predicted protein [Populus trichocarpa]
Length = 516
Score = 133 bits (335), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 148/287 (51%), Gaps = 10/287 (3%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M + L+ A R+DL++KV GI E YF +P K E+Y ALL+ YA K
Sbjct: 104 MTDKRYLALTSRAVAVRLDLISKVHGIEQVENYFNNIPTKLKGLESYGALLNCYAYVKSV 163
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
EKAE + +R+++ + L++ M+ LY G EK+ ++ E++ + D F Y +
Sbjct: 164 EKAEAVMQRMRELGFARKPLVFTVMLNLYYKTGNTEKLDPLMREMEENGISFDKFAYCIR 223
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
+SS AA + + ++K L + D DW Y + N Y + L++ L E+
Sbjct: 224 LSSYAAASDSEGLEKTLKRIESDPNVVLDWATYATVANGY-SKVGLLDKALEMLKRCERL 282
Query: 181 IT-QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 239
IT +R+ YD+L+ YA G K+ + ++W+ + K+ + +R I +++S L L+
Sbjct: 283 ITGERRSTPYDYLMTQYATTGTKEDVLRVWE---LHKRYVGNRKNISVITSLLKFDDLES 339
Query: 240 VGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 286
+I ++W+ D DI N L+ A+S GL EKA +LLQ+
Sbjct: 340 AEKIFEEWESQKLCD-DIIIPNFLVDAYSRKGLLEKAE----MLLQR 381
>gi|356514762|ref|XP_003526072.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Glycine max]
Length = 492
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 145/277 (52%), Gaps = 7/277 (2%)
Query: 2 VTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTE 61
++ K +S D A ++DL+ +V G+ S ERY + L KT + + ALL+ Y +
Sbjct: 90 MSSKGLPISSRDQAVQLDLIGRVHGVESAERYLQSLSDGDKTWKVHGALLNCYVREGLVD 149
Query: 62 KAEELFERVKQSN-LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
K+ L +++K +SF L YN +M+LY Q EKV V+E++K+ V P+IF+Y +
Sbjct: 150 KSLSLMQKMKDMGFVSF--LNYNNIMSLYTQTQQYEKVPGVLEQMKKDGVPPNIFSYRIC 207
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
I+S ++ V+K L+EM + DW+ Y + N YI A A L++ EK
Sbjct: 208 INSYCVRGDLANVEKLLEEMEREPHIGIDWITYSMVTNFYIKADMREKA-LVCLMKCEKK 266
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 240
+ + Y+ LI A L +K + + WK + +K +R YI +L + LG L +
Sbjct: 267 THRGNTVAYNHLISHNAALRSKGGMMRAWKLQKANCKKQLNREYITMLGCLVKLGELDKA 326
Query: 241 GEIIDQWKQSA-TSDFDISACNRLLGAFSDVGLTEKA 276
+++ +W+ S T DF + N LL + GL EKA
Sbjct: 327 EKVLGEWELSGNTCDFRVP--NILLIGYCQRGLVEKA 361
>gi|115482784|ref|NP_001064985.1| Os10g0501300 [Oryza sativa Japonica Group]
gi|22165054|gb|AAM93671.1| putative leaf protein [Oryza sativa Japonica Group]
gi|31432901|gb|AAP54477.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113639594|dbj|BAF26899.1| Os10g0501300 [Oryza sativa Japonica Group]
Length = 513
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 150/280 (53%), Gaps = 10/280 (3%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M + LS D A R++L++KV G+ YF+ +P + + Y +LL YA A+
Sbjct: 108 MTERRHLHLSPGDVAYRLELISKVHGLDKAVEYFDAVPNQLRELQCYGSLLRCYAEAERV 167
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
EKAEELFE ++ ++ N+ YN MM LY +GQVE+V + + ++ +VPDIFT +
Sbjct: 168 EKAEELFENMRGMGMA-NSYAYNAMMNLYSQIGQVERVDSMYKAMEEGGIVPDIFTIDNL 226
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
+S+ A +++ ++K L++ SC++ S W + + +++ A A E+EK
Sbjct: 227 VSAYADVEDVEAIEKVLEKASCNNLMS--WHSFAIVGKVFMKAGMQERA-LQAFQESEKR 283
Query: 181 ITQRQ--WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN--YICILSSYLMLGH 236
IT R+ + Y FL+ +YA L ++D+IW R +K ++ N Y+C +S L +
Sbjct: 284 ITARKDGRVAYGFLLTMYADLQMDSEVDRIWDVYR-SKVPASACNTMYMCRISVLLKMND 342
Query: 237 LKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
+ + ++W +S D N LL A+ GL EKA
Sbjct: 343 IVGAEKAYEEW-ESKHVYHDSRLINILLTAYCKEGLMEKA 381
>gi|125575304|gb|EAZ16588.1| hypothetical protein OsJ_32060 [Oryza sativa Japonica Group]
Length = 475
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 150/280 (53%), Gaps = 10/280 (3%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M + LS D A R++L++KV G+ YF+ +P + + Y +LL YA A+
Sbjct: 70 MTERRHLHLSPGDVAYRLELISKVHGLDKAVEYFDAVPNQLRELQCYGSLLRCYAEAERV 129
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
EKAEELFE ++ ++ N+ YN MM LY +GQVE+V + + ++ +VPDIFT +
Sbjct: 130 EKAEELFENMRGMGMA-NSYAYNAMMNLYSQIGQVERVDSMYKAMEEGGIVPDIFTIDNL 188
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
+S+ A +++ ++K L++ SC++ S W + + +++ A A E+EK
Sbjct: 189 VSAYADVEDVEAIEKVLEKASCNNLMS--WHSFAIVGKVFMKAGMQERA-LQAFQESEKR 245
Query: 181 ITQRQ--WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN--YICILSSYLMLGH 236
IT R+ + Y FL+ +YA L ++D+IW R +K ++ N Y+C +S L +
Sbjct: 246 ITARKDGRVAYGFLLTMYADLQMDSEVDRIWDVYR-SKVPASACNTMYMCRISVLLKMND 304
Query: 237 LKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
+ + ++W +S D N LL A+ GL EKA
Sbjct: 305 IVGAEKAYEEW-ESKHVYHDSRLINILLTAYCKEGLMEKA 343
>gi|125532539|gb|EAY79104.1| hypothetical protein OsI_34210 [Oryza sativa Indica Group]
Length = 513
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/294 (30%), Positives = 153/294 (52%), Gaps = 10/294 (3%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M + LS D A R++L++KV G+ YF+ +P + + Y +LL Y A+
Sbjct: 108 MTERRHLHLSPGDVAYRLELISKVHGLDKAVEYFDAVPNQLRELQCYGSLLRCYTEAERV 167
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
EKAEELFE ++ ++ N+ YN MM LY +GQVE+V + + ++ +VPDIFT +
Sbjct: 168 EKAEELFENMRGMGMA-NSYAYNAMMNLYSQIGQVERVHSMYKSMEEGGIVPDIFTIDNL 226
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
+S+ A +++ ++K L++ SC++ S W + + +++ A A E+EK
Sbjct: 227 VSAYADVEDVEAIEKVLEKASCNNLMS--WHSFAIVGKVFMKAGMQERA-LQAFQESEKR 283
Query: 181 ITQRQ--WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN--YICILSSYLMLGH 236
IT R+ + Y FL+ +YA L ++D+IW R +K ++ N Y+C +S L +
Sbjct: 284 ITARKDGRVAYGFLLTMYADLQMDSEVDRIWDVYR-SKVPASACNTMYMCRISVLLKMND 342
Query: 237 LKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
+ + ++W +S D N LL A+ GL EKA ++K P
Sbjct: 343 IVGAEKAYEEW-ESKHVYHDSRLINILLTAYCKEGLMEKAEALVDQFIKKGRTP 395
>gi|357446577|ref|XP_003593564.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482612|gb|AES63815.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 495
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 139/269 (51%), Gaps = 2/269 (0%)
Query: 8 VLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELF 67
+ S ++A +DL +V G ++ E YF L + +T+ ALL+ Y + +K+
Sbjct: 93 IFSPVEHAVHLDLTGRVHGFYAAETYFNSLKDIERNEKTHGALLNCYVRQRQVDKSLSHL 152
Query: 68 ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAAT 127
+++K+ + ++L YN +M LY ++GQ EKV+ V E+K +V+PD F+Y + I S
Sbjct: 153 KKMKELGFALSSLTYNNIMCLYTNIGQHEKVSDVFNEMKENHVLPDNFSYRICIGSYGVR 212
Query: 128 LNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWI 187
+ID + L EM DW Y + N YI A L + L + EK + +
Sbjct: 213 SDIDGMNAILKEMESQPHIVMDWNTYSVVANFYIKA-ELSSEAIDALRKCEKRLDDKDGE 271
Query: 188 TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQW 247
Y+ LI LYA LG K+++ ++W + ++ +R++I +L S + L E +I+ +W
Sbjct: 272 GYNHLISLYARLGKKNEVLRLWDMEKSACKRCLNRDFITMLESLVKLEEFDEADKILKEW 331
Query: 248 KQSATSDFDISACNRLLGAFSDVGLTEKA 276
+ S +D N ++ +S+ EKA
Sbjct: 332 EFSGNC-YDYGVPNVVVVGYSEKDFPEKA 359
>gi|242096944|ref|XP_002438962.1| hypothetical protein SORBIDRAFT_10g029030 [Sorghum bicolor]
gi|241917185|gb|EER90329.1| hypothetical protein SORBIDRAFT_10g029030 [Sorghum bicolor]
Length = 503
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 149/292 (51%), Gaps = 6/292 (2%)
Query: 4 HKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKA 63
H +F+ D+A +DL+ + G+ + E YF L KT + Y ALL+ Y +KA
Sbjct: 114 HVKFL--PKDHAVHLDLIGHIHGVGAAETYFNNLSDKDKTEKPYGALLYCYTRECLVDKA 171
Query: 64 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 123
F+++K+ F L Y+ +M LY +V Q E+V V+ E+K +VP+ F+YN+ I++
Sbjct: 172 LAHFQKMKELGFVFTPLPYSNLMILYANVEQHERVPSVMAEMKSNGIVPNNFSYNICINA 231
Query: 124 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQ 183
+ ++ L+EM S DW Y ++ + YI L S L +AE + +
Sbjct: 232 YGTRADFSGLENTLEEMEFASQVVVDWRTYADVASHYIKGD-LREKAYSALQKAEAKMDE 290
Query: 184 RQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQK-MTSRNYICILSSYLMLGHLKEVGE 242
+ Y LI LY LG+K +I ++W L+M K K ++ Y +L+ + L + E +
Sbjct: 291 KDSFAYSHLISLYGHLGDKSEIKRLW-VLQMLKCKGCINKGYKYMLTVLVKLDEIAEAED 349
Query: 243 IIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
++ +W +S+ ++FD N LL + GL +KA L+K P+ S
Sbjct: 350 LLKKW-ESSKNEFDFKVPNILLKGYCQWGLLDKAEALLDGFLRKGKKPSATS 400
>gi|449438486|ref|XP_004137019.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
gi|449479168|ref|XP_004155524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 500
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 139/277 (50%), Gaps = 4/277 (1%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M + LS SD A R+DL+ V G+ E YF + + KTS Y ALL Y K
Sbjct: 94 MTDRRYLSLSPSDAAVRLDLIHSVHGLEHAENYFNSISIRLKTSNVYGALLGCYVREKSL 153
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
EKAE + + +++ ++ + YN ++ LY +GQ +K+ L++EE+K K + DI++
Sbjct: 154 EKAEAIMQEMRKMGIATTSFAYNVLINLYAQIGQHDKIDLLIEEMKTKGIPQDIYSIRNL 213
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
++ A +I ++K L + DS DW Y N Y+TA A S EK
Sbjct: 214 CAAYVAKADISGMEKILKRIEEDSELKADWTIYSIAANGYLTAGLETEALSMLKKTEEKV 273
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR-MTKQKMTSRNYICILSSYLMLGHLKE 239
+ FL+ LY G+K+++ ++W + + +TK+ T Y +++S L ++
Sbjct: 274 RPNTNKFAFKFLLSLYERTGHKNEVYRVWNTFKPLTKE--TCVPYALMITSLAKLDDIEG 331
Query: 240 VGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
I +W +S + +D NRLL A+ GL +KA
Sbjct: 332 AERIFQEW-ESKCTVYDFRVLNRLLVAYCRKGLLDKA 367
>gi|255553771|ref|XP_002517926.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542908|gb|EEF44444.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 504
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 144/280 (51%), Gaps = 4/280 (1%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M K L D A R+DL++KV G+ E YF +P +++ + Y ALL+ A +K
Sbjct: 97 MTDKKGCSLLPGDVAVRLDLISKVHGLVKAEEYFNSIPDTSRDRQVYGALLNCCAHSKLL 156
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
KAE +++K N+L YN M++LY +G EK+ +V+E++ + D TY +
Sbjct: 157 GKAEATMQKMKDLGFVKNSLSYNVMLSLYSHMGNYEKLDPLVQEMEENGISCDRITYCIR 216
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
+++C + +I+ ++K L +M D S + YV N Y+ A LV+ L +E+
Sbjct: 217 LNACVNSSDIEGMEKLLMKMEVDPNISVGFHAYVIAANGYLKAG-LVDKTLIMLKRSEQL 275
Query: 181 IT-QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 239
I+ + Y+FL+ LY GNK ++ +IW + + S YIC++SS L L +
Sbjct: 276 ISGNTRRFAYEFLLTLYTASGNKAEVYRIWNKYKEIGRFFNS-GYICMISSLLKLDDIDG 334
Query: 240 VGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 279
I ++W S FDI N ++ +S G EKA +
Sbjct: 335 AERIFEEW-DSKKVLFDIRIPNSMVNVYSRKGHLEKAETY 373
>gi|297729245|ref|NP_001176986.1| Os12g0527850 [Oryza sativa Japonica Group]
gi|255670359|dbj|BAH95714.1| Os12g0527850 [Oryza sativa Japonica Group]
Length = 313
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 112/199 (56%), Gaps = 3/199 (1%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M T E L D+A +DL+ KV G+ S E++FE +P AK T ALLH Y
Sbjct: 86 MRTQPEMRLLPGDHAVHLDLVAKVRGLPSAEKFFEDMPERAKGPSTCNALLHAYVQHGRR 145
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
+KAE + E + ++ AL +N MM+LYMS G++EKV +++E+ R+ +PD+ TYN+W
Sbjct: 146 DKAEAMLEEMAKAGYLTCALPFNHMMSLYMSSGELEKVPEMIKEL-RRYTIPDLVTYNIW 204
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
++ C+ ++ +K D M D DW+ + L +IYI A V + LVE EK
Sbjct: 205 LTYCSKKNSVKAAEKVYDLMK-DERVVPDWMTFSLLGSIYINAGLHVKGRDA-LVEMEKR 262
Query: 181 ITQRQWITYDFLIILYAGL 199
++++ Y L+ LYA L
Sbjct: 263 ASRKERAAYSSLLTLYASL 281
>gi|357442213|ref|XP_003591384.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480432|gb|AES61635.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 539
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 148/279 (53%), Gaps = 11/279 (3%)
Query: 13 DYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQ 72
+YA +DL++KV G+ E +F P AK TY +LL+ Y +KA F+++ +
Sbjct: 159 NYAVYLDLVSKVKGVVEAENHFNSFPPPAKNKYTYGSLLNCYCKELMLDKALSHFDKMDE 218
Query: 73 SNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQ 132
+L + +M++YM + Q KV +V +K + + FTY LW++SCAA ++ +
Sbjct: 219 FGY-LTSLSFTNLMSMYMRLSQPSKVPQLVNVMKERKIRMTEFTYILWMNSCAALNDLGE 277
Query: 133 VKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFL 192
V++ +EM + DW Y NL IYI A AE L + E + RQ TY FL
Sbjct: 278 VERVYEEMKREDEDKIDWKTYSNLAAIYIKAGFFEKAE-LMLKKVEGVMKPRQRETYHFL 336
Query: 193 IILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSAT 252
+ LYAG GN ++ ++W +L+ +T+R+Y+ +LS+ L ++ + ++ +W+
Sbjct: 337 LSLYAGTGNVKEVYRVWGTLKKI-TPVTNRSYLIMLSNLRRLNDMEGIIKLFKEWESR-- 393
Query: 253 SDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ---KNC 288
+S +RL+G L++ ++ +L+ + K+C
Sbjct: 394 ---HVSYDSRLVGVAVQAYLSQNMDKEAVLVFEEALKSC 429
>gi|225446335|ref|XP_002273904.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial [Vitis vinifera]
Length = 499
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 154/286 (53%), Gaps = 7/286 (2%)
Query: 7 FVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEEL 66
F +S D A ++DL++KV G+ E+YF P S ++ + Y ALL+ Y+ K EKAE +
Sbjct: 99 FDISPGDVAIQLDLISKVHGLEQAEKYFNETPNSLRSFQVYGALLNCYSQKKSLEKAEAI 158
Query: 67 FERVKQSNLSF-NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCA 125
+ ++ ++ F L YN M+ LY +G+ EK+ +++E++ + D FTY + +++
Sbjct: 159 MQEMR--DMGFVKTLSYNVMLGLYSRLGKHEKLDNLMQEMEENGIGLDSFTYCIRLNAYC 216
Query: 126 ATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR- 184
AT +++ ++K L ++ D + DW Y+ N Y+ A L L ++E+ I+ R
Sbjct: 217 ATSDMEGMEKLLMKLETDPAVNSDWNAYIVAANGYLKAD-LKEKAVEMLKKSEQFISGRS 275
Query: 185 QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEII 244
+ Y+ L+ LYA +GNK ++ +IW +L T K + Y+ ++SS L L + +
Sbjct: 276 RRFGYEILLTLYATMGNKTEVYRIW-NLYKTIGKFFNTGYVAMVSSLLKLDDMDGAEKTF 334
Query: 245 DQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
++W S FD N L+ A+ GL EKA + +++ P
Sbjct: 335 EEW-LSGNKFFDFRVPNLLIRAYCKKGLLEKAEQLVSRAIEQGEEP 379
>gi|326507912|dbj|BAJ86699.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 140/268 (52%), Gaps = 4/268 (1%)
Query: 9 LSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFE 68
LS A R+DL++KV GI + E YF +P +K+ +TY+ LL+ Y K E +E
Sbjct: 116 LSPGHQAMRLDLISKVHGIQAAEEYFWSIPDISKSVKTYSCLLNCYGKHGLAYKGLEFYE 175
Query: 69 RVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATL 128
++K ++ + L+YN +M LY GQ EK+ EE++ + D F Y I S
Sbjct: 176 KMKAKSIVPDKLVYNYLMILYQKAGQPEKILSTFEEMRESGISADKFAYFTLIESYITMN 235
Query: 129 NIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWIT 188
++D +K L E+ W Y + N YI AE + + +AE+ + + +
Sbjct: 236 DLDAAEKVLAELQ--KVAPVHWSLYTLMANNYIKLKLFGKAEVA-IKKAEEGMDKADLRS 292
Query: 189 YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK 248
+ L+ L+A GN ++ ++WKSL+ T +K +R+Y+ +L + M+ + + +I +W
Sbjct: 293 WYALLSLHAHCGNSTEVKRVWKSLKSTFKKCLNRSYLVMLQALSMIDDFESLQQIFQEW- 351
Query: 249 QSATSDFDISACNRLLGAFSDVGLTEKA 276
QS+ +D N ++ A+ D G+ ++A
Sbjct: 352 QSSHEHYDKRIANVVIKAYLDKGMIDEA 379
>gi|326533934|dbj|BAJ93740.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 489
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 143/268 (53%), Gaps = 5/268 (1%)
Query: 9 LSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFE 68
L D+A R+DL+ V G+ + E YF LP K+ +TY++LLH YA K EKA EL+E
Sbjct: 103 LLPGDHALRLDLICTVNGLEAAEEYFLSLPDMYKSVKTYSSLLHCYAEHK-AEKALELYE 161
Query: 69 RVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATL 128
+++ N+ N L+Y +M+LY+ GQ EK+ EE++ V D FTY + S
Sbjct: 162 KMRTMNIVPNTLVYKNLMSLYLKTGQPEKILQTFEEMRANGVRTDNFTYYMLTESHIMLN 221
Query: 129 NIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWIT 188
++ +KFL+++ + W Y L + Y A TL +AE+ + + +
Sbjct: 222 GLESTEKFLEDL--EKSIPVHWSLYTRLADSYNKVGQFDKA-GLTLKKAEEVMDRGEMFA 278
Query: 189 YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK 248
+ L+ LYA GN ++ ++W SLR + ++R+Y+ +LS+ L + ++ +W+
Sbjct: 279 WHNLLSLYASSGNLSEVKRVWSSLRSELKISSNRSYLVMLSALKKLDDFDCMQQVFQEWE 338
Query: 249 QSATSDFDISACNRLLGAFSDVGLTEKA 276
+ S +D+ N ++ A+ +T++A
Sbjct: 339 LTQES-YDMRIPNVMIKAYLAKDMTDEA 365
>gi|147775992|emb|CAN73453.1| hypothetical protein VITISV_024964 [Vitis vinifera]
Length = 499
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 153/286 (53%), Gaps = 7/286 (2%)
Query: 7 FVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEEL 66
F +S D A ++DL++KV G+ E+YF P S ++ + Y ALL+ Y+ K EKAE +
Sbjct: 99 FDISPGDVAIQLDLISKVHGLEQAEKYFNETPNSLRSFQVYGALLNCYSQKKSLEKAEAI 158
Query: 67 FERVKQSNLSF-NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCA 125
+ ++ ++ F L YN M+ LY +G+ EK+ +++E++ + D FTY + +++
Sbjct: 159 MQEMR--DMGFVKTLSYNVMLGLYSRLGKHEKLDNLMQEMEENGIGLDSFTYCIRLNAYC 216
Query: 126 ATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR- 184
AT +++ ++K L ++ D + DW Y+ N Y+ A L L ++E+ I+ R
Sbjct: 217 ATSDMEGMEKLLMKLETDPAVNSDWNAYIVAANGYLKAD-LKEKAVEMLKKSEQFISGRS 275
Query: 185 QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEII 244
+ Y+ L+ LYA +GNK + +IW +L T K + Y+ ++SS L L + +
Sbjct: 276 RRFGYEILLTLYATMGNKTEXYRIW-NLYKTIGKFFNTGYVAMVSSLLKLDDMDGAEKTF 334
Query: 245 DQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
++W S FD N L+ A+ GL EKA + +++ P
Sbjct: 335 EEW-LSGNKFFDFRVPNLLIRAYCKKGLLEKAEQLVSRAIEQGEEP 379
>gi|449431834|ref|XP_004133705.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Cucumis sativus]
gi|449478158|ref|XP_004155237.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Cucumis sativus]
Length = 492
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 158/294 (53%), Gaps = 4/294 (1%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M + F L+ D+A ++DL+ +V G+ S E+YF + + + Y ALL+ Y
Sbjct: 104 MCSKGLFSLTTRDFAIQLDLIGQVRGLDSAEKYFGSVSNQKEIGKLYGALLNCYVREGLI 163
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
+K+ +++K+ L+ + L YN++M LY++ GQ +KV V+ E+K V+PD F+Y +
Sbjct: 164 DKSLAHMQKMKEMGLASSPLCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRIC 223
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
ISS A ++ ++ L EM + S DW Y + +I A + + + L + E
Sbjct: 224 ISSYGARSDVISMENVLKEMEGQTHISMDWTTYSMVAGFFIKAG-MHDKAMNYLRKCEDK 282
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 240
+ + + ++ LI Y LG+K+++ ++W L+ K+++ +R+YI +L S + L L+E
Sbjct: 283 VDE-DALGFNHLISHYTNLGHKNEVMRLWALLKKGKKQL-NRDYITMLGSLVKLELLEEA 340
Query: 241 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
++ +W +S+ +D N +L +S GL EKA + ++ P+ S
Sbjct: 341 ENLVMEW-ESSCQCYDFRVPNVVLIGYSQKGLIEKAEKMLRNIIVNGMIPSPNS 393
>gi|388517969|gb|AFK47046.1| unknown [Lotus japonicus]
Length = 496
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 155/285 (54%), Gaps = 5/285 (1%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M + + LS A RI L++KV G+ E +F+G+P + + Y +LL YA K
Sbjct: 92 MSNERNYDLSSGLIAKRIHLISKVHGLKKAEDFFQGIPDDKRGFKIYASLLSCYAEHKSL 151
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
E+AE + +++K+ + YN ++ LY G+ EK+ +++E+K +N + + T+ +
Sbjct: 152 EEAEAIMKKIKELRPMHLTVCYNILLKLYAQKGKYEKLDRLMQEMK-ENDLCNGATFTIR 210
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
+++ A +++ ++K L +M D + DW Y N Y+ A ++ A ++ L ++E+S
Sbjct: 211 LNAYVAAKDVEGMEKLLMQMEADPMATVDWYTYSTAANGYLKAGNVEKALAA-LKKSEQS 269
Query: 181 ITQRQW-ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 239
+ ++ + Y+ L YA +GNKD++ ++W ++ Q + +YIC+LSS L L
Sbjct: 270 VKGKKLRLAYESLQSTYAAIGNKDEVYRLWNRIK-NLQNCWNSSYICMLSSLLKLDDFDG 328
Query: 240 VGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 284
+I+ +W +S +FD N ++ A+ GL +KA + LL
Sbjct: 329 AEKILAEW-ESEHKNFDTRIPNLMITAYCKRGLLDKAEAYIQKLL 372
>gi|224121664|ref|XP_002330622.1| predicted protein [Populus trichocarpa]
gi|222872226|gb|EEF09357.1| predicted protein [Populus trichocarpa]
Length = 378
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 143/277 (51%), Gaps = 3/277 (1%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M + F + D A R+ L+ +V G+ E YF L + KT TY A+L+ K
Sbjct: 1 MTARRFFTFTTEDAAVRLGLIHRVRGLEEAENYFNKLSVKLKTKYTYGAILNGCVREKSV 60
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
+KAE + + +++ ++ ++ YN ++ LY G +K+ +++E++R + D +T
Sbjct: 61 QKAEAVMQEMREGGMTTSSFPYNILIILYSQTGDFDKIPPLMKEMERNGIAEDKYTLRNL 120
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
I++ A +I V++ L M + DW Y + Y+ + A + L + EK
Sbjct: 121 IAASVAASDISGVERILKLMEENPELGLDWKLYAMAADAYLKIGSIETA-LTMLEKLEKW 179
Query: 181 IT-QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 239
+ +++ ++FL+ LYA GNKD++ +IW + + + M + +Y C++ S L ++
Sbjct: 180 MAFRKKKAVFNFLLSLYAKTGNKDELYRIWNLYKPSSESMDT-SYCCMIDSLTKLDDIEG 238
Query: 240 VGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
+I ++W+ T+ +D N LL A+ + GL EKA
Sbjct: 239 AEKIFEEWESQCTTTYDFRVLNGLLVAYCNRGLFEKA 275
>gi|359497206|ref|XP_002262853.2| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Vitis vinifera]
Length = 494
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 147/291 (50%), Gaps = 4/291 (1%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M + L D A R++L+ KV G+ E YF + + KT + Y ALL+ YA K
Sbjct: 106 MSDKRYIPLMPRDIALRMNLILKVHGLEQVENYFNNIHKNLKTYQVYIALLNCYALEKSV 165
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
+KAE + +R++ AL YN +M +Y +G EK+ +++ E++ K + D FT +
Sbjct: 166 DKAEAIMQRLRDLGFVRTALGYNTLMNVYYRMGNWEKLDILMHEMEEKGIFCDKFTLAIR 225
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
+S+ AA NI + + M D DW Y + + Y+ LV+ + + E+
Sbjct: 226 LSAYAAASNIVGIDNIVTRMESDPRIILDWNSYAVVAHGYLKVG-LVDKTLVMMKKLEEL 284
Query: 181 ITQR-QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 239
I + + +D L+ LYA +D++D++W L K+K+ ++ Y+ ++SS L +
Sbjct: 285 IDAKGSNVAFDNLLKLYAETRQRDELDRVW-MLYKKKEKIYNKGYMAMISSLLKFDDIDA 343
Query: 240 VGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
+++++W+ S +D N L+ A+ GLTEKA +L K P
Sbjct: 344 AEKVLEEWESRRLS-YDFRVPNFLIDAYCRKGLTEKAEALVNKILTKGGNP 393
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 84/174 (48%), Gaps = 20/174 (11%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M + L D A R++L+ KV G+ E YF + + KT + Y ALL+ YA K
Sbjct: 27 MSDKRYIPLMPRDIALRMNLILKVHGLEQVENYFNNIHKNLKTYQVYIALLNCYALEKSV 86
Query: 61 EKAEELFERVKQ--------SNLSFNALMYNEM---MTLYMSVGQVEKVALVVEEIKRKN 109
+KAE + +R++ S+ + LM ++ M L + V +E+V E N
Sbjct: 87 DKAEAIMQRLRDLGFISQWMSDKRYIPLMPRDIALRMNLILKVHGLEQV-----ENYFNN 141
Query: 110 VVPDIFTYNLWIS--SC-AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
+ ++ TY ++I+ +C A ++D+ + + + D G + Y L+N+Y
Sbjct: 142 IHKNLKTYQVYIALLNCYALEKSVDKAEAIMQRLR-DLGFVRTALGYNTLMNVY 194
>gi|357142115|ref|XP_003572464.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01990,
mitochondrial-like [Brachypodium distachyon]
Length = 546
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 142/273 (52%), Gaps = 4/273 (1%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQS 73
+A R+ L+ KV G+ + E YF LP K+ +TY++LL+ YA + +K ELFE++K
Sbjct: 155 HAVRLGLVCKVNGLEAAEEYFWSLPEMFKSIKTYSSLLNCYAEHRKADKGLELFEKMKAM 214
Query: 74 NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQV 133
N++ + L+YN +M LY+ Q EK+ E+++ +V D FTY + S ++
Sbjct: 215 NITPSTLVYNNLMDLYLKTDQPEKIPTTFEQMRENHVRTDSFTYYMLTQSYIMVNDLKSA 274
Query: 134 KKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLI 193
+KF++E+ + W Y L N Y + A L +AE+ + + + + L+
Sbjct: 275 EKFVEEL--EKSTPVPWSLYTVLANNYNKLAQFDKA-VLALKKAEEVMDRSEISAWHNLL 331
Query: 194 ILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATS 253
LYA GN ++ ++W+SL+ K +R+Y+ +LS+ L + ++ +W +S
Sbjct: 332 SLYASSGNSSEVKRVWESLKSAFTKCINRSYLVMLSALKKLDDFDSLQQLFQEW-ESTHE 390
Query: 254 DFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 286
+D+ N ++ A+ +T++A + K
Sbjct: 391 RYDMRITNVMIEAYLAKDMTDEAEALRQTAMAK 423
>gi|22165052|gb|AAM93669.1| putative leaf protein [Oryza sativa Japonica Group]
gi|31432900|gb|AAP54476.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|125575303|gb|EAZ16587.1| hypothetical protein OsJ_32059 [Oryza sativa Japonica Group]
Length = 545
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 148/286 (51%), Gaps = 10/286 (3%)
Query: 9 LSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFE 68
LS D A R++L+TKV G+ YF+ +P K + Y +LL YA AK EKAEELFE
Sbjct: 148 LSPGDVAYRLELITKVHGLDRAVEYFDSMPDQLKQQQCYGSLLKCYAEAKCVEKAEELFE 207
Query: 69 RVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATL 128
+++ ++ ++ YN MM LY+ GQVE+V + ++ +V D+FT + +++
Sbjct: 208 KMRGMGMA-SSYAYNVMMRLYLQDGQVERVHSMHRTMEESGIVADVFTTDTLVAAYVVAE 266
Query: 129 NIDQVKKFLDEM-SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR-QW 186
+I+ ++K L++ +C+ + W Y + + + S + E+EK I ++
Sbjct: 267 DIEAIEKVLEKADTCNDLMT--WHSYATIGKV-LMQSGMEERALQAFQESEKKIAKKSNR 323
Query: 187 ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN--YICILSSYLMLGHLKEVGEII 244
+ Y FL+ +YA LG ++D+IW + +K ++ N Y+C +S L + + +
Sbjct: 324 VAYGFLLTMYADLGMNSEVDRIWDVYK-SKVPASACNSMYMCRISVLLKMNDIVGAEKAY 382
Query: 245 DQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
++W +S D N LL A+ GL EKA ++K P
Sbjct: 383 EEW-ESKHVYHDSRLINLLLTAYCKEGLMEKAEALVDQFVKKGRTP 427
>gi|356542147|ref|XP_003539532.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Glycine max]
Length = 483
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 152/287 (52%), Gaps = 10/287 (3%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M + + LS + A +I+L++KV G+ E+YF G+P + + Y ALL YA K
Sbjct: 80 MSNERNYELSPGNIAKQINLISKVRGLEQAEKYFRGIPDAKIEFKIYAALLRCYAEHKSV 139
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
E+AE + +++K+ + N M+ LY G+ EK+ +++E+K K++ + TY +
Sbjct: 140 EEAEAVLKKIKELHPVNITACCNMMLELYAKKGKYEKLDRLMQEMKEKDIC-NAGTYTIR 198
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAE-- 178
+++ +I ++K L +M D + DW Y+ N Y H ++ L ++E
Sbjct: 199 LNAYVIATDIKGMEKLLMQMEVDPMATVDWYTYMTAANGY-RKVHNFEKVAAMLKKSEHV 257
Query: 179 -KSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHL 237
+ T+R + Y+ + +YA +GNKD++ ++W T K +++YI +LSS + L +
Sbjct: 258 ARGKTKR--LAYESIQTMYAIIGNKDEVHRLWNMC--TSPKKPNKSYIRMLSSLVKLDDI 313
Query: 238 KEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 284
+I+++W +S +FD+ N ++ A+ G +KA + LL
Sbjct: 314 DGAEKILEEW-ESVHENFDVRIPNLMISAYCKWGQFDKAEAYIRRLL 359
>gi|297803972|ref|XP_002869870.1| hypothetical protein ARALYDRAFT_354609 [Arabidopsis lyrata subsp.
lyrata]
gi|297315706|gb|EFH46129.1| hypothetical protein ARALYDRAFT_354609 [Arabidopsis lyrata subsp.
lyrata]
Length = 480
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 152/281 (54%), Gaps = 8/281 (2%)
Query: 7 FVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEEL 66
F LS +D+ TRI+L+++V G+ E +FE +P K +++LL YA K EKA +L
Sbjct: 100 FPLSLTDFGTRINLISRVCGLGEAEVFFENIPKDMKGIAVFSSLLSCYAREKSAEKAAKL 159
Query: 67 FERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAA 126
E +K++ +S + YN MM +Y + K+ ++ E+++ V D FT ++ +S+ AA
Sbjct: 160 VEAMKEAGVSMDTRCYNLMMNMYYQMNVHGKLDDLMLEMEQNGVSFDQFTLSIRLSAYAA 219
Query: 127 TLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQW 186
NI+ ++K ++++S S + DW Y N ++ L++ + L + E+ + +
Sbjct: 220 ASNIEGIEKTIEKISSMSETAIDWTIYSAAANAFLKV-ELIDEATMMLKKCEEFVNEDSG 278
Query: 187 -ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIID 245
+ L+ LY G K+ + ++W + ++K+ + Y ++SS L G ++ V ++ +
Sbjct: 279 NEAFHTLLKLYGETGRKEDLSRVWLRFK-EERKVFNSGYKIMISSALKFGDIELVEKVFN 337
Query: 246 QWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 286
QW+ S +D N L+ + + LTEKA LLL+K
Sbjct: 338 QWESEKLS-YDFRIPNLLINFYCEKDLTEKAE----LLLKK 373
>gi|356565994|ref|XP_003551220.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g60770-like [Glycine max]
Length = 469
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 133/282 (47%), Gaps = 40/282 (14%)
Query: 13 DYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQ 72
D+A +DL+ K GI + + YF LP SAK + A+L+ Y EKAE E++K+
Sbjct: 101 DHAIHLDLLAKARGITAAKNYFVNLPESAKNHLCHGAILNCYCKEPMIEKAEGFMEKMKE 160
Query: 73 SNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQ 132
+L +++ YN ++ LY VGQ EKV+ +++E+K N++ D +TYN+W+ + AA +I
Sbjct: 161 LSLPLSSMPYNSLIMLYTKVGQPEKVSSLIQEMKTSNIMLDSYTYNVWMRALAAVNDISS 220
Query: 133 VKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFL 192
V++ DEM L E EK + Y FL
Sbjct: 221 VERVHDEMMA-------------------------------LTELEKRNAFKDLTAYQFL 249
Query: 193 IILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI----CILSSYLMLGHLKEVGEIIDQWK 248
I Y N ++ ++W+SLR+ K + +Y+ ++ S +LG K E
Sbjct: 250 ITFYGXTSNLYEVFRVWRSLRLAFPKTANISYLNMIRVLVKSKDLLGEEKCFXEX----- 304
Query: 249 QSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
+ +DI N L+ A++ + + EKA E ++ P
Sbjct: 305 ECGCPTYDIRVVNVLIRAYAKLDMLEKAEELKEHARRRGAKP 346
>gi|298571988|gb|ADI87991.1| PPR protein [Silene latifolia]
Length = 224
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 118/225 (52%), Gaps = 2/225 (0%)
Query: 37 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 96
+P + K Y ALL+ Y GAK +KAE L E+++ L YN MMTLYM + +++
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 97 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 156
KV +V E+K+K + D ++YN+W+S+ + + + +++ EM D +W + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 157 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 216
++Y + L AE L E IT R + Y +L+ LY LGN+ ++ ++W +
Sbjct: 121 ASMYAKSGQLEKAE-QCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 217 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 261
K+ + Y ++SS + G ++ ++ ++W S FD N
Sbjct: 180 PKIPNWGYHSVISSLVRSGDIEGAEKLYEEW-LPVKSSFDPKIGN 223
>gi|297851240|ref|XP_002893501.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297339343|gb|EFH69760.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 667
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 143/274 (52%), Gaps = 6/274 (2%)
Query: 9 LSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTE-KAEELF 67
L D+A R+ L+ V G+ E++FE +P +A+ YT LL+ YA + T KAE F
Sbjct: 94 LIPEDFAARLHLIENVVGLEEAEKFFESIPKNARDDSVYTTLLNWYARSDKTLCKAEATF 153
Query: 68 ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAAT 127
+++++ L YN MM+LY+++ EKV ++ E+K +V D T N + +A
Sbjct: 154 QKMRELGLLSRPSPYNAMMSLYIALNDREKVEELLREMKDNDVEADSITVNNVLKLYSAV 213
Query: 128 LNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWI 187
++ ++KFL++ +G +W+ +++ Y+ A N ++ ++ + + R+ +
Sbjct: 214 CDVTAMEKFLNKWEGINGIKLEWLTTLDMAKAYLRARS--NGKAIKMLRLTEELADRKSL 271
Query: 188 --TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIID 245
YD L+ LY GN++++ +IW +M + ++ Y ++ S L + + EI
Sbjct: 272 KSAYDHLMKLYGEAGNREEVLRIWNLYKMNIGQRDNKGYRTVIRSLLKVDDIFGAEEIYK 331
Query: 246 QWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 279
W +S + +FDI L + + G+TEKA +
Sbjct: 332 VW-ESLSLEFDIRIPTMLASGYRERGMTEKAEKL 364
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Query: 9 LSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGA--KWTEKAEEL 66
L DYA R+ L V G+ E+YFE +P + K Y ALL YA + EE+
Sbjct: 426 LYSEDYAARLYLTENVLGLEKAEKYFENIPENMKDYSVYVALLSSYAKSDKNLENMVEEI 485
Query: 67 FERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
++++N+ +++ N ++ +Y + +VE + +
Sbjct: 486 LREMEENNVDPDSITVNYVLKVYAAASKVEAMEM 519
>gi|115436130|ref|NP_001042823.1| Os01g0301500 [Oryza sativa Japonica Group]
gi|57899055|dbj|BAD87829.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|113532354|dbj|BAF04737.1| Os01g0301500 [Oryza sativa Japonica Group]
gi|222618277|gb|EEE54409.1| hypothetical protein OsJ_01440 [Oryza sativa Japonica Group]
Length = 484
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 138/279 (49%), Gaps = 5/279 (1%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLP--LSAKTSETYTALLHLYAGAK 58
MV K ++ + YA ++L+ V+GI + E YF G+P + TY ALL+ Y AK
Sbjct: 106 MVNTKGMSMTYARYALHLELLYSVYGIEAAEEYFSGIPSFTRDQNHRTYGALLNCYCSAK 165
Query: 59 WTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYN 118
EKA ++ R+ + + + + N +M LY+ +GQ KVA + +E+K +NV PD T
Sbjct: 166 MEEKATNIYRRMDELGIPSSTKLMNNLMGLYLELGQHSKVANLFDEMKERNVQPDELTCC 225
Query: 119 LWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAE 178
+ + S AA ID VK+ MS W + L +IY+ A + AE + + E
Sbjct: 226 ILMRSHAAHNKIDTVKETFYNMSL-LDVPKQWSIFRTLGSIYMNAGMVEEAELAFMRAQE 284
Query: 179 KSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMT-KQKMTSRNYICILSSYLMLGHL 237
+ FL+ +A +GN ++++WK ++MT T+ +Y+ +L LG
Sbjct: 285 FLGFDHGRHPFYFLMRQFASIGNLRGVNRVWKDIKMTFSYNRTNFSYLLMLQCLYKLGDT 344
Query: 238 KEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
+ EI +W + ++D N L A G+T +A
Sbjct: 345 DRMKEIYKEW-EYRYENYDPRLTNMLTRAHLRNGMTNEA 382
>gi|357140786|ref|XP_003571944.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Brachypodium distachyon]
Length = 497
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 139/278 (50%), Gaps = 6/278 (2%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M + F L D A R++L++KV G+ S YF GL K S+ Y +LL YA AK+
Sbjct: 94 MTDRRYFPLKPGDVAYRLELISKVHGLKSAVEYFGGLSKEIKKSQCYGSLLKCYAEAKFV 153
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
E+AE+ F +++ + ++ YN MM LY GQVEKV + ++ + PD+FT ++
Sbjct: 154 EEAEKFFGEMQEMGM-MSSYPYNVMMKLYWETGQVEKVRTMYRAMEESGIKPDLFTIDIL 212
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
++ A+ +++ +++ L E + W Y + + ++ A L L E+EK
Sbjct: 213 LTVYKASGDLEGIEEVL-EKAKPRENLVGWHSYAIVASAFMKAG-LQGKALQALQESEKR 270
Query: 181 ITQRQW-ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 239
I + + Y FL+ + A G + ++D+IW + +K + Y+C +S+ L + E
Sbjct: 271 IDPKNGRVAYGFLLSMCADSGMRSEVDRIWDVYK-SKVPTCNSMYMCRISALLKMNDTDE 329
Query: 240 VGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 277
+ +W +S D N LL + GL EKA
Sbjct: 330 AEKAFREW-ESRFVHHDFRLINLLLNGYCAEGLMEKAE 366
>gi|298572008|gb|ADI88001.1| PPR protein [Silene latifolia]
gi|298572012|gb|ADI88003.1| PPR protein [Silene latifolia]
gi|298572028|gb|ADI88011.1| PPR protein [Silene latifolia]
gi|298572052|gb|ADI88023.1| PPR protein [Silene latifolia]
Length = 224
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 117/225 (52%), Gaps = 2/225 (0%)
Query: 37 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 96
+P + K Y ALL+ Y GAK +KAE L E+++ L YN MMTLYM + +++
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 97 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 156
KV +V E+K+K + D ++YN+W+S+ + + + +++ EM D +W + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTM 120
Query: 157 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 216
++Y L AE L E IT R + Y +L+ LY LGN+ ++ ++W +
Sbjct: 121 ASMYAKLGQLEKAE-QCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 217 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 261
K+ + Y ++SS + G ++ ++ ++W S FD N
Sbjct: 180 PKIPNWGYHSVISSLVRSGDIEGAEKLYEEW-LPVKSSFDPKIGN 223
>gi|298572016|gb|ADI88005.1| PPR protein [Silene latifolia]
Length = 224
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 117/225 (52%), Gaps = 2/225 (0%)
Query: 37 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 96
+P + K Y ALL+ Y GAK +KAE L E+++ L YN MMTLYM + +++
Sbjct: 1 VPDTLKDMRLYGALLNAYGGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 97 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 156
KV +V E+K+K + D ++YN+W+S+ + + + +++ EM D +W + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 157 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 216
++Y + L AE L E IT R + Y +L+ LY LGN+ ++ ++W +
Sbjct: 121 ASMYAKSGQLEKAE-QCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 217 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 261
+ + Y ++SS + G ++ ++ ++W S FD N
Sbjct: 180 PNIPNWGYHSVISSLVRSGDIEGAEKLYEEW-LPVKSSFDPKIGN 223
>gi|298572060|gb|ADI88027.1| PPR protein [Silene latifolia]
Length = 224
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 117/225 (52%), Gaps = 2/225 (0%)
Query: 37 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 96
+P + K Y ALL+ Y GAK +KAE L E+++ L YN MMTLYM + +++
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 97 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 156
KV +V E+K+K + D ++YN+W+S+ + + + +++ EM D +W + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 157 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 216
++Y L AE L E IT R + Y +L+ LY LGN+ ++ ++W +
Sbjct: 121 ASMYAKLGKLEKAE-QCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 217 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 261
K+ + Y ++SS + G ++ ++ ++W S FD N
Sbjct: 180 PKIPNWGYHSVISSLVRSGDIEGAEKLYEEW-LPVKSSFDPKIGN 223
>gi|298572004|gb|ADI87999.1| PPR protein [Silene latifolia]
gi|298572006|gb|ADI88000.1| PPR protein [Silene latifolia]
Length = 224
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 117/225 (52%), Gaps = 2/225 (0%)
Query: 37 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 96
+P + K Y ALL+ Y GAK +KAE L E+++ L YN MMTLYM + +++
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 97 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 156
KV +V E+K+K + D ++YN+W+S+ + + + +++ EM D +W + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTM 120
Query: 157 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 216
++Y L AE L E IT R + Y +L+ LY LGN+ ++ ++W +
Sbjct: 121 ASMYAKLGQLEKAE-QCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 217 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 261
K+ + Y ++SS + G ++ ++ ++W S FD N
Sbjct: 180 PKIPNWGYHSVISSLVRSGDIEGAEKLYEEW-LPVKSSFDPKIGN 223
>gi|298571984|gb|ADI87989.1| PPR protein [Silene latifolia]
Length = 224
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 117/225 (52%), Gaps = 2/225 (0%)
Query: 37 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 96
+P + K Y ALL+ Y GAK +KAE L E+++ L YN MMTLYM + +++
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 97 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 156
KV +V E+K+K + D ++YN+W+S+ + + + +++ EM D +W + +
Sbjct: 61 KVEDLVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTM 120
Query: 157 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 216
++Y L AE L E IT R + Y +L+ LY LGN+ ++ ++W +
Sbjct: 121 ASMYAKLGQLEKAE-QCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 217 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 261
K+ + Y ++SS + G ++ ++ ++W S FD N
Sbjct: 180 PKIPNWGYHSVISSLVRSGDIEGAEKLYEEW-LPVKSSFDPKIGN 223
>gi|298571976|gb|ADI87985.1| PPR protein [Silene latifolia]
gi|298571992|gb|ADI87993.1| PPR protein [Silene latifolia]
gi|298572000|gb|ADI87997.1| PPR protein [Silene latifolia]
gi|298572064|gb|ADI88029.1| PPR protein [Silene latifolia]
Length = 224
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 117/225 (52%), Gaps = 2/225 (0%)
Query: 37 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 96
+P + K Y ALL+ Y GAK +KAE L E+++ L YN MMTLYM + +++
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 97 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 156
KV +V E+K+K + D ++YN+W+S+ + + + +++ EM D +W + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 157 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 216
++Y + L AE L E IT R + Y +L+ LY LGN+ ++ ++W +
Sbjct: 121 ASMYAKSGQLEKAE-QCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 217 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 261
+ + Y ++SS + G ++ ++ ++W S FD N
Sbjct: 180 PNIPNWGYHSVISSLVRSGDIEGAEKLYEEW-LPVKSSFDPKIGN 223
>gi|298572018|gb|ADI88006.1| PPR protein [Silene latifolia]
Length = 224
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 117/225 (52%), Gaps = 2/225 (0%)
Query: 37 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 96
+P + K Y ALL+ Y GAK +KAE L E+++ L YN MMTLYM + +++
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 97 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 156
KV +V E+K+K + D ++YN+W+S+ + + + +++ EM D +W + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSHGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 157 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 216
++Y + L AE L E IT R + Y +L+ LY LGN+ ++ ++W +
Sbjct: 121 ASMYAKSGQLEKAE-QCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 217 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 261
+ + Y ++SS + G ++ ++ ++W S FD N
Sbjct: 180 PNIPNWGYHSVISSLVRSGDIEGAEKLYEEW-LPVKSSFDPKIGN 223
>gi|298572036|gb|ADI88015.1| PPR protein [Silene latifolia]
Length = 224
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 117/225 (52%), Gaps = 2/225 (0%)
Query: 37 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 96
+P + K Y ALL+ Y GAK +KAE L E+++ L YN MMTLYM + +++
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 97 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 156
KV +V E+K+K + D ++YN+W+S+ + + + +++ EM D +W + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTM 120
Query: 157 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 216
++Y + L AE L E IT R + Y +L+ LY LGN+ ++ ++W +
Sbjct: 121 ASMYAKSGQLEKAE-QCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 217 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 261
+ + Y ++SS + G ++ ++ ++W S FD N
Sbjct: 180 PNIPNWGYHSVISSLVRSGDIEGAEKLYEEW-LPVKSSFDPKIGN 223
>gi|302143278|emb|CBI21839.3| unnamed protein product [Vitis vinifera]
Length = 501
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 141/278 (50%), Gaps = 7/278 (2%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M + F L+ SD A R+DL++ V G E YF +P + KTS Y ALL Y K
Sbjct: 80 MTDRRYFTLTPSDAAIRLDLISMVHGRVQAESYFNNIPNNLKTSSAYGALLSGYVREKSV 139
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTY-NL 119
EKAE +++++ + + ++ YN ++ LY G K+ +++E++ K + D FT NL
Sbjct: 140 EKAEATMQKMREMDFATSSFPYNMLINLYSQTGNHGKIEALIQEMQSKAIPCDAFTVRNL 199
Query: 120 WISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA-ESSTLVEAE 178
++ AA+ +I ++KFL+ M D S DW Y + Y+ + A E +E+
Sbjct: 200 MVAYVAAS-DISAMEKFLNRMEEDPHISVDWNIYSVAASGYLKVGLIDKALEMLKKIESN 258
Query: 179 KSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLK 238
+ +R + FL+ LYA G+K ++ ++W + + + Y C+++ L ++
Sbjct: 259 RPHLER-LSAFKFLLSLYARTGHKQELYRVWNLYKPSYE--YPEAYSCMITCLTKLDDIE 315
Query: 239 EVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
+I +W+ T +D NRLL A+ L +KA
Sbjct: 316 GAEKIFQEWECECTM-YDFRVLNRLLSAYCKRCLFDKA 352
>gi|449438490|ref|XP_004137021.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 334
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 125/227 (55%), Gaps = 8/227 (3%)
Query: 67 FERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAA 126
+++++ L YN M+ LY +G+ EK+A +++E++ + PD FTYN+ +++ AA
Sbjct: 1 MQKMREVGFMKTPLSYNAMLNLYAHLGKHEKLAELLKEMEEMGIGPDRFTYNIRMNAYAA 60
Query: 127 TLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLV--EAEKSITQR 184
+I ++K L +M D + DW Y + N Y A +E+S L+ +AE+ I +
Sbjct: 61 ASDITNMEKLLSKMEADPLVATDWHTYFVVGNGYFKAGL---SENSILMLKKAEQFIGDK 117
Query: 185 Q-WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI 243
Q W+ Y +L+ LYA +GNKD++ ++W +L QK + Y+CI+SS + L + I
Sbjct: 118 QKWLAYQYLMTLYAAIGNKDEVYRVW-NLYTNLQKRFNSGYLCIISSLMKLDDIDGAERI 176
Query: 244 IDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
+ +W+ TS FD N ++ ++ G +KA + L++ P
Sbjct: 177 LKEWESGDTS-FDFRIPNMMINSYCTKGFVDKAEAYINRLIETGKEP 222
>gi|359485373|ref|XP_003633265.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Vitis vinifera]
Length = 461
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 141/278 (50%), Gaps = 7/278 (2%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M + F L+ SD A R+DL++ V G E YF +P + KTS Y ALL Y K
Sbjct: 80 MTDRRYFTLTPSDAAIRLDLISMVHGRVQAESYFNNIPNNLKTSSAYGALLSGYVREKSV 139
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFT-YNL 119
EKAE +++++ + + ++ YN ++ LY G K+ +++E++ K + D FT NL
Sbjct: 140 EKAEATMQKMREMDFATSSFPYNMLINLYSQTGNHGKIEALIQEMQSKAIPCDAFTVRNL 199
Query: 120 WISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA-ESSTLVEAE 178
++ AA+ +I ++KFL+ M D S DW Y + Y+ + A E +E+
Sbjct: 200 MVAYVAAS-DISAMEKFLNRMEEDPHISVDWNIYSVAASGYLKVGLIDKALEMLKKIESN 258
Query: 179 KSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLK 238
+ +R + FL+ LYA G+K ++ ++W + + + Y C+++ L ++
Sbjct: 259 RPHLER-LSAFKFLLSLYARTGHKQELYRVWNLYKPSYE--YPEAYSCMITCLTKLDDIE 315
Query: 239 EVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
+I +W+ T +D NRLL A+ L +KA
Sbjct: 316 GAEKIFQEWECECTM-YDFRVLNRLLSAYCKRCLFDKA 352
>gi|298571978|gb|ADI87986.1| PPR protein [Silene latifolia]
gi|298571980|gb|ADI87987.1| PPR protein [Silene latifolia]
gi|298571982|gb|ADI87988.1| PPR protein [Silene latifolia]
gi|298571990|gb|ADI87992.1| PPR protein [Silene latifolia]
gi|298571994|gb|ADI87994.1| PPR protein [Silene latifolia]
gi|298571996|gb|ADI87995.1| PPR protein [Silene latifolia]
gi|298571998|gb|ADI87996.1| PPR protein [Silene latifolia]
gi|298572002|gb|ADI87998.1| PPR protein [Silene latifolia]
gi|298572020|gb|ADI88007.1| PPR protein [Silene latifolia]
gi|298572022|gb|ADI88008.1| PPR protein [Silene latifolia]
Length = 224
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 116/225 (51%), Gaps = 2/225 (0%)
Query: 37 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 96
+P + K Y ALL+ Y GAK +KAE L E+++ L YN MMTLYM + +++
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 97 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 156
KV +V E+K+K + D ++YN+W+S+ + + + +++ EM D +W + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 157 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 216
++Y L AE L E IT R + Y +L+ LY LGN+ ++ ++W +
Sbjct: 121 ASMYAKLGQLEKAE-QCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 217 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 261
+ + Y ++SS + G ++ ++ ++W S FD N
Sbjct: 180 PNIPNWGYHSVISSLVRSGDIEGAEKLYEEW-LPVKSSFDPKIGN 223
>gi|298572066|gb|ADI88030.1| PPR protein [Silene latifolia]
Length = 224
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 116/225 (51%), Gaps = 2/225 (0%)
Query: 37 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 96
+P + K Y ALL+ Y GAK +KAE L E+++ L YN MMTLYM + +++
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 97 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 156
KV +V E+K+K + D ++YN+W+S+ + + + +++ EM D +W + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 157 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 216
++Y L AE L E IT R + Y +L+ LY LGN+ ++ ++W +
Sbjct: 121 ASMYAKLGQLDKAE-QCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 217 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 261
+ + Y ++SS + G ++ ++ ++W S FD N
Sbjct: 180 PNIPNWGYHSVISSLVRSGDIEGAEKLYEEW-LPVKSSFDPKIGN 223
>gi|298572062|gb|ADI88028.1| PPR protein [Silene latifolia]
Length = 224
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 116/225 (51%), Gaps = 2/225 (0%)
Query: 37 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 96
+P + K Y ALL+ Y GAK +KAE L E+++ L YN MMTLYM + +++
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 97 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 156
KV +V E+K+K + D ++YN+W+S+ + + + +++ EM D +W + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSHGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 157 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 216
++Y L AE L E IT R + Y +L+ LY LGN+ ++ ++W +
Sbjct: 121 ASMYAKLGQLEKAE-QCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 217 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 261
+ + Y ++SS + G ++ ++ ++W S FD N
Sbjct: 180 PNIPNWGYHSVISSLVRSGDIEGAEKLYEEW-LPVKSSFDPKIGN 223
>gi|298572024|gb|ADI88009.1| PPR protein [Silene latifolia]
gi|298572032|gb|ADI88013.1| PPR protein [Silene latifolia]
gi|298572044|gb|ADI88019.1| PPR protein [Silene latifolia]
gi|298572056|gb|ADI88025.1| PPR protein [Silene latifolia]
Length = 224
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 116/225 (51%), Gaps = 2/225 (0%)
Query: 37 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 96
+P + K Y ALL+ Y GAK +KAE L E+++ L YN MMTLYM + +++
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 97 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 156
KV +V E+K+K + D ++YN+W+S+ + + + +++ EM D +W + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTM 120
Query: 157 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 216
++Y L AE L E IT R + Y +L+ LY LGN+ ++ ++W +
Sbjct: 121 ASMYAKLGQLEKAE-QCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 217 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 261
+ + Y ++SS + G ++ ++ ++W S FD N
Sbjct: 180 PNIPNWGYHSVISSLVRSGDIEGAEKLYEEW-LPVKSSFDPKIGN 223
>gi|298572040|gb|ADI88017.1| PPR protein [Silene latifolia]
Length = 224
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 116/225 (51%), Gaps = 2/225 (0%)
Query: 37 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 96
+P + K Y ALL+ Y GAK +KAE L E+++ L YN MMTLYM + +++
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 97 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 156
KV +V E+K+K + D ++YN+W+S+ + + + +++ EM D +W + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 157 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 216
++Y L AE L E IT R + Y +L+ LY LGN+ ++ ++W +
Sbjct: 121 ASMYAKLGQLEKAE-QCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 217 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 261
+ + Y ++SS + G ++ ++ ++W S FD N
Sbjct: 180 TNIPNWGYHSVISSLVRSGDIEGAEKLYEEW-LPVKSSFDPKIGN 223
>gi|298572026|gb|ADI88010.1| PPR protein [Silene latifolia]
gi|298572046|gb|ADI88020.1| PPR protein [Silene latifolia]
Length = 224
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 116/225 (51%), Gaps = 2/225 (0%)
Query: 37 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 96
+P + K Y ALL+ Y GAK +KAE L E+++ L YN MMTLYM + +++
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 97 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 156
KV +V E+K+K + D ++YN+W+S+ + + + +++ EM D +W + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTM 120
Query: 157 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 216
++Y L AE L E IT R + Y +L+ LY LGN+ ++ ++W +
Sbjct: 121 ASMYAKLGELEKAE-QCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 217 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 261
+ + Y ++SS + G ++ ++ ++W S FD N
Sbjct: 180 PNIPNWGYHSVISSLVRSGDIEGAEKLYEEW-LPVKSSFDPKIGN 223
>gi|298572014|gb|ADI88004.1| PPR protein [Silene latifolia]
gi|298572038|gb|ADI88016.1| PPR protein [Silene latifolia]
Length = 224
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 116/225 (51%), Gaps = 2/225 (0%)
Query: 37 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 96
+P + K Y ALL+ Y GAK +KAE L E+++ L YN MMTLYM + +++
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAEMLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 97 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 156
KV +V E+K+K + D ++YN+W+S+ + + + +++ EM D +W + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 157 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 216
++Y L AE L E IT R + Y +L+ LY LGN+ ++ ++W +
Sbjct: 121 ASMYAKLGQLEKAE-QCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 217 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 261
+ + Y ++SS + G ++ ++ ++W S FD N
Sbjct: 180 PNIPNWGYHSVISSLVRSGDIEGAEKLYEEW-LPVKSSFDPKIGN 223
>gi|298572010|gb|ADI88002.1| PPR protein [Silene latifolia]
gi|298572034|gb|ADI88014.1| PPR protein [Silene latifolia]
gi|298572054|gb|ADI88024.1| PPR protein [Silene latifolia]
Length = 224
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 116/225 (51%), Gaps = 2/225 (0%)
Query: 37 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 96
+P + K Y ALL+ Y GAK +KAE L E+++ L YN MMTLYM + +++
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 97 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 156
KV +V E+K+K + D ++YN+W+S+ + + + +++ EM D +W + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTM 120
Query: 157 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 216
++Y L AE L E IT R + Y +L+ LY LGN+ ++ ++W +
Sbjct: 121 ASMYAKLGQLEKAE-QCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 217 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 261
+ + Y ++SS + G ++ ++ ++W S FD N
Sbjct: 180 PNIPNWGYHSVISSLVRSGDIEGAEKLYEEW-LPVKSSFDPKIGN 223
>gi|298572042|gb|ADI88018.1| PPR protein [Silene latifolia]
Length = 224
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 116/225 (51%), Gaps = 2/225 (0%)
Query: 37 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 96
+P + K Y ALL+ Y GAK +KAE L E+++ L YN MMTLYM + +++
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 97 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 156
KV +V E+K+K + D ++YN+W+S+ + + + +++ EM D +W + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 157 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 216
++Y L AE L E IT R + Y +L+ LY LGN+ ++ ++W +
Sbjct: 121 ASMYAKLGELEKAE-QCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 217 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 261
+ + Y ++SS + G ++ ++ ++W S FD N
Sbjct: 180 TNIPNWGYHSVISSLVRSGDIEGAEKLYEEW-LPVKSSFDPKIGN 223
>gi|298572030|gb|ADI88012.1| PPR protein [Silene latifolia]
Length = 224
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 117/225 (52%), Gaps = 2/225 (0%)
Query: 37 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 96
+P + K Y ALL+ Y GAK +KAE L E+++ L YN MMTLYM + +++
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAEMLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 97 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 156
+V +V E+K+K + D ++YN+W+S+ + + + +++ EM D +W + +
Sbjct: 61 EVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTM 120
Query: 157 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 216
++Y L AE L E IT R + Y +L+ LY LGN+ ++ ++W +
Sbjct: 121 ASMYAKLGELEKAE-QCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 217 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 261
K+ + Y ++SS + G ++ ++ ++W S FD N
Sbjct: 180 PKIPNWGYHSVISSLVRSGDIEGAEKLYEEW-LPVKSSFDPKIGN 223
>gi|298571986|gb|ADI87990.1| PPR protein [Silene latifolia]
Length = 224
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 116/225 (51%), Gaps = 2/225 (0%)
Query: 37 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 96
+P + K Y ALL+ Y GAK +KAE L E+++ L YN MMTLYM + +++
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAEMLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 97 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 156
KV +V E+K+K + D ++YN+W+S+ + + + +++ EM D +W + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTM 120
Query: 157 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 216
++Y L AE L E IT R + Y +L+ LY LGN+ ++ ++W +
Sbjct: 121 ASMYAKLGQLEKAE-QCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 217 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 261
+ + Y ++SS + G ++ ++ ++W S FD N
Sbjct: 180 PNIPNWGYHSVISSLVRSGDIEGAEKLYEEW-LPVKSSFDPKIGN 223
>gi|218188053|gb|EEC70480.1| hypothetical protein OsI_01546 [Oryza sativa Indica Group]
Length = 484
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 137/279 (49%), Gaps = 5/279 (1%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLP--LSAKTSETYTALLHLYAGAK 58
MV K ++ + YA ++L+ V+GI + E YF G+P + TY ALL+ Y AK
Sbjct: 106 MVNTKGMSMTYARYALHLELLYSVYGIEAAEEYFSGIPSFTRDQNHRTYGALLNCYCSAK 165
Query: 59 WTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYN 118
EKA ++ R+ + + + + N +M LY+ +GQ K A + +E+K +NV PD T
Sbjct: 166 MEEKATNIYRRMDELGIPSSTKLMNNLMGLYLELGQHSKAANLFDEMKERNVQPDELTCC 225
Query: 119 LWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAE 178
+ + S AA ID VK+ MS W + L +IY+ A + AE + + E
Sbjct: 226 ILMRSHAAHNKIDTVKETFYNMSL-LDVPKQWSIFRTLGSIYMNAGMVEEAELAFMRAQE 284
Query: 179 KSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMT-KQKMTSRNYICILSSYLMLGHL 237
+ FL+ +A +G+ ++++WK ++MT T+ +Y+ +L LG
Sbjct: 285 FLGFDHGRHPFYFLMRQFASIGSLRGVNRVWKDIKMTFSYNRTNFSYLLMLQCLYKLGDT 344
Query: 238 KEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
+ EI +W + ++D N L A G+T +A
Sbjct: 345 DRMKEIYKEW-EYRYENYDPRLTNMLTRAHLRNGMTNEA 382
>gi|298572058|gb|ADI88026.1| PPR protein [Silene latifolia]
Length = 224
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 116/225 (51%), Gaps = 2/225 (0%)
Query: 37 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 96
+P + K Y ALL+ Y GAK +KAE L E+++ L YN MMTLYM + +++
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAEMLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 97 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 156
KV +V E+K+K + D ++YN+W+S+ + + + +++ EM D +W + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTM 120
Query: 157 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 216
++Y L AE L E IT R + Y +L+ LY LGN+ ++ ++W +
Sbjct: 121 ASMYAKLGQLEKAE-QCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 217 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 261
+ + Y ++SS + G ++ ++ ++W S FD N
Sbjct: 180 PNIPNWGYHSVISSLVRSGDIEGAEKLYEEW-LPVKSSFDPKIGN 223
>gi|298572960|gb|ADI88477.1| PPR protein [Silene vulgaris]
Length = 224
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 115/225 (51%), Gaps = 2/225 (0%)
Query: 37 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 96
+P + K Y ALL+ Y AK +KAE L E+++ L YN MMTLYM + +++
Sbjct: 1 VPDTLKDMRLYGALLNAYVAAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 97 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 156
KV +V E+K+K + D ++YN+W+S+ + + + +++ EM D + +W + +
Sbjct: 61 KVEELVSEMKQKKIQLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIAPNWTTFSTM 120
Query: 157 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 216
+Y L AE L E IT R + Y +LI LY LGN+ ++ ++W +
Sbjct: 121 AAMYSKLGQLEKAE-QCLRNLETRITNRDRMPYHYLISLYGSLGNRGEVYRVWNIYKSVF 179
Query: 217 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 261
+ + Y ++SS + G ++ ++ ++W S FD N
Sbjct: 180 PNIPNWGYHSVISSLVRSGDIEGAEKLYEEW-LPVKSSFDPKIGN 223
>gi|298572048|gb|ADI88021.1| PPR protein [Silene latifolia]
Length = 224
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 116/225 (51%), Gaps = 2/225 (0%)
Query: 37 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 96
+P + K Y ALL+ Y GAK +KAE L E+++ L YN MMTLYM + +++
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 97 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 156
+V +V E+K+K + D ++YN+W+S+ + + + +++ EM D +W + +
Sbjct: 61 EVEELVSEMKQKKISLDSYSYNIWLSTRGSQGSPESMEQVFREMDLDPRIIPNWTTFSTM 120
Query: 157 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 216
++Y L AE L E IT R + Y +L+ LY LGN+ ++ ++W +
Sbjct: 121 ASMYAKLGQLEKAE-QCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 217 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 261
+ + Y ++SS + G ++ ++ ++W S FD N
Sbjct: 180 PNIPNWGYHSVISSLVRSGDIEGAEKLYEEW-LPVKSSFDPKIGN 223
>gi|298572050|gb|ADI88022.1| PPR protein [Silene latifolia]
Length = 224
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 116/225 (51%), Gaps = 2/225 (0%)
Query: 37 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 96
+P + K Y ALL+ Y GAK +KAE L E+++ L YN MMTLYM + +++
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 97 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 156
+V +V E+K+K + D ++YN+W+S+ + + + +++ EM D +W + +
Sbjct: 61 EVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTM 120
Query: 157 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 216
++Y L AE L E IT R + Y +L+ LY LGN+ ++ ++W +
Sbjct: 121 ASMYAKLGQLEKAE-QCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 217 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 261
+ + Y ++SS + G ++ ++ ++W S FD N
Sbjct: 180 PNIPNWGYHSVISSLVRSGDIEGAEKLYEEW-LPVKSSFDPKIGN 223
>gi|356547012|ref|XP_003541912.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g20710, mitochondrial-like [Glycine max]
Length = 482
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 150/287 (52%), Gaps = 9/287 (3%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M + + LS A +I+L++KV G+ ERYF G+P + Y ALL YA K
Sbjct: 80 MSNERNYELSPGSIAKQINLISKVHGLEQAERYFRGIPDDKIEFKIYAALLRCYAEHKSV 139
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
E+AE + + +K+ + N M+ LY G+ EK+ +++E+K K++ + TY +
Sbjct: 140 EEAEAVMKXIKELHPVNITPCCNMMLELYAKKGKYEKLDRLMQEMKEKDIC-NASTYTIR 198
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAE-- 178
+++ +I ++K L +M D + DW Y+ N Y H + L ++E
Sbjct: 199 LNAYVVVTDIKGMEKLLMQMEADPVATVDWYTYMTAANGYRRV-HNFEKVAEMLKKSEHL 257
Query: 179 -KSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHL 237
+ T+R + ++ + +YA +GNKD++ ++W ++ + +K + +YI +LSS L +
Sbjct: 258 ARGNTRR--LAFESIQTMYAIIGNKDEVYRLW-NMCTSLKKPNNSSYIRMLSSLAKLDEI 314
Query: 238 KEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 284
+I+++W +S ++FD+ N ++ A+ G +KA + LL
Sbjct: 315 DGAEKILEEW-ESKYANFDVRIPNLMISAYCKWGQFDKAEAYIRRLL 360
>gi|195613552|gb|ACG28606.1| tetratricopeptide-like helical [Zea mays]
gi|414870858|tpg|DAA49415.1| TPA: tetratricopeptide-like helical [Zea mays]
Length = 517
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 136/277 (49%), Gaps = 5/277 (1%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M + LS D A R+DL++KV G+ YF +P + + Y +LL Y AK
Sbjct: 98 MTDRRHLHLSVGDVAYRLDLISKVHGLEKAVEYFGMVPKQLRKPQCYGSLLKCYVEAKAV 157
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
+KAEE F ++++ ++ ++ Y MM LY+ GQ+E+V + ++++ K V PD F+
Sbjct: 158 DKAEEHFAKMQEMGMT-SSYAYTWMMKLYLQTGQLERVHAMFQDMEEKGVKPDTFSVEAM 216
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
+++ A ++ V K LD+ + W + + ++++ + V A LVEAE+
Sbjct: 217 LAAYIAAEDVQGVGKVLDKANPHEKLV-TWHGHASAASLFMKSGMQVGA-VMALVEAERR 274
Query: 181 ITQR-QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 239
I+ + I Y FL+ Y LG + +IW S+ +K + Y+ LS+ L +
Sbjct: 275 ISPKSSRIAYAFLLKTYTELGMHAEAGRIW-SVYKSKVPPCNTMYMSRLSALLRTNDIDG 333
Query: 240 VGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
+ +W+ D N ++ A+ GL EKA
Sbjct: 334 AEATLKEWETVPLRYHDFRLINVMVDAYCREGLVEKA 370
>gi|168063926|ref|XP_001783918.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664548|gb|EDQ51263.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 448
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 134/268 (50%), Gaps = 3/268 (1%)
Query: 12 SDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVK 71
+D RIDL K+ E+ E P KT Y LL YA + +KA+ L E++K
Sbjct: 58 ADNIVRIDLKAKMKQFAVAEQLLEDSPPEFKTELAYHTLLRNYADYQMAQKADALLEKLK 117
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
+ + +N+MM LY G + KV ++ ++K V D++TYN+ + A + +I+
Sbjct: 118 GTGILTLPFAFNQMMLLYKRKGMMNKVTEILADMKTHGVPKDVYTYNILMDVKARSGDIE 177
Query: 132 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 191
++K +E+S D D + L + A L++ S L E E+ R YD
Sbjct: 178 GMEKIFEELSADENVKADAATFGTLATFCVHAG-LLDKARSYLKEMEEGDVFRNRSAYDI 236
Query: 192 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 251
LI Y +G+++ ++++W+ ++ + +++R+YI ++ ++ LG +++ E+ +S
Sbjct: 237 LISQYGAVGDQEGVERVWEKVK-SGPVVSNRSYITVIEAFGKLGMVEKAEELYGIMSKSK 295
Query: 252 TSDFDISACNRLLGAFSDVGLTEKANEF 279
N LL A++ GL EKA +
Sbjct: 296 GLILS-RQFNSLLSAYARQGLMEKAEKL 322
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 77/161 (47%), Gaps = 12/161 (7%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 102
++ +Y ++ + EKAEEL+ + +S + +N +++ Y G +EK +V
Sbjct: 264 SNRSYITVIEAFGKLGMVEKAEELYGIMSKSKGLILSRQFNSLLSAYARQGLMEKAEKLV 323
Query: 103 EEI----KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS--GGSDDWVK-YVN 155
E++ ++KN V TY+ ++ T +D+ + E DS G S WV+ ++
Sbjct: 324 EDMVKLGRKKNAV----TYHHLVTGYLKTDQLDKALAVMKEAQGDSKQGRSRLWVETLIS 379
Query: 156 LVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILY 196
+++ Y +++AE + +K+ + Y+ L+ Y
Sbjct: 380 VLDAYAERGDVISAEKQ-FQDIKKAYPRPNIQVYNILLKAY 419
>gi|226533322|ref|NP_001142217.1| uncharacterized protein LOC100274385 [Zea mays]
gi|194707648|gb|ACF87908.1| unknown [Zea mays]
gi|414870857|tpg|DAA49414.1| TPA: hypothetical protein ZEAMMB73_857299 [Zea mays]
Length = 472
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 137/277 (49%), Gaps = 5/277 (1%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M + LS D A R+DL++KV G+ YF +P + + Y +LL Y AK
Sbjct: 53 MTDRRHLHLSVGDVAYRLDLISKVHGLEKAVEYFGMVPKQLRKPQCYGSLLKCYVEAKAV 112
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
+KAEE F ++++ ++ ++ Y MM LY+ GQ+E+V + ++++ K V PD F+
Sbjct: 113 DKAEEHFAKMQEMGMT-SSYAYTWMMKLYLQTGQLERVHAMFQDMEEKGVKPDTFSVEAM 171
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
+++ A ++ V K LD+ + W + + ++++ + V A + LVEAE+
Sbjct: 172 LAAYIAAEDVQGVGKVLDKANPHEKLV-TWHGHASAASLFMKSGMQVGAVMA-LVEAERR 229
Query: 181 ITQR-QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 239
I+ + I Y FL+ Y LG + +IW S+ +K + Y+ LS+ L +
Sbjct: 230 ISPKSSRIAYAFLLKTYTELGMHAEAGRIW-SVYKSKVPPCNTMYMSRLSALLRTNDIDG 288
Query: 240 VGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
+ +W+ D N ++ A+ GL EKA
Sbjct: 289 AEATLKEWETVPLRYHDFRLINVMVDAYCREGLVEKA 325
>gi|242039187|ref|XP_002466988.1| hypothetical protein SORBIDRAFT_01g017960 [Sorghum bicolor]
gi|241920842|gb|EER93986.1| hypothetical protein SORBIDRAFT_01g017960 [Sorghum bicolor]
Length = 510
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 139/277 (50%), Gaps = 5/277 (1%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M + L+ D A R+DL++KV G+ YF +P + + Y +LL Y AK
Sbjct: 101 MTDRRHLHLTAGDVAYRLDLISKVHGLEKAVEYFGMVPKRLRMPQCYGSLLKCYVEAKAV 160
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
+KAEE F ++++ + ++ Y MM LY+ GQ+E+V + ++++ K V PD F+
Sbjct: 161 DKAEEHFAKMQEMGMK-SSYTYTSMMKLYLETGQLERVHAMFQDMEEKGVKPDTFSVESM 219
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
+++ A +++ V K LD+ + W ++++ + V A + L+EAE+
Sbjct: 220 LAAYIAAEDVEGVGKVLDKANPHEKLV-KWHGQALAASLFMKSGMQVRAVMA-LLEAERR 277
Query: 181 ITQR-QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 239
I+ + I Y FL+ Y LG ++ +IW S+ +K ++ Y+ +S+ L + +
Sbjct: 278 ISPKSSRIAYAFLLKTYTDLGMYPEVGRIW-SVYKSKVPPSNTMYLSRISALLKMNDIDG 336
Query: 240 VGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
+ +W+ + D N ++ A+ GL EKA
Sbjct: 337 AEATLKEWETVSLRYHDFRLINLMVDAYCREGLVEKA 373
>gi|15217811|ref|NP_174123.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|12322989|gb|AAG51479.1|AC069471_10 hypothetical protein [Arabidopsis thaliana]
gi|332192782|gb|AEE30903.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 612
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 137/273 (50%), Gaps = 4/273 (1%)
Query: 9 LSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTE-KAEELF 67
L D+A R+ L+ V G+ E++FE +P +A+ YT+LL+ YA + T KAE F
Sbjct: 102 LIPEDFAARLHLIENVVGLEEAEKFFESIPKNARGDSVYTSLLNSYARSDKTLCKAEATF 161
Query: 68 ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAAT 127
++++ L + YN MM+LY ++ EKV ++ E+K +V D T N + +A
Sbjct: 162 QKMRDLGLLLRPVPYNAMMSLYSALKNREKVEELLLEMKDNDVEADNVTVNNVLKLYSAV 221
Query: 128 LNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWI 187
++ +++KFL++ G +W +++ Y+ A A L E+ + Q+
Sbjct: 222 CDVTEMEKFLNKWEGIHGIKLEWHTTLDMAKAYLRARSSGKA-MKMLRLTEQLVDQKSLK 280
Query: 188 T-YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 246
+ YD L+ LY GN++++ ++WK + + + Y ++ S L + + EI
Sbjct: 281 SAYDHLMKLYGEAGNREEVLRVWKLYKSKIGERDNNGYRTVIRSLLKVDDIVGAEEIYKV 340
Query: 247 WKQSATSDFDISACNRLLGAFSDVGLTEKANEF 279
W +S +FD L + D G+TEKA +
Sbjct: 341 W-ESLPLEFDHRIPTMLASGYRDRGMTEKAEKL 372
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 13 DYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGA--KWTEKAEELFERV 70
DYA R+ L V G+ E+YFE +P + K Y ALL YA + +E+ +
Sbjct: 438 DYAARLYLTENVLGLEEAEKYFENIPENMKDYSVYVALLSSYAKSDKNLGNMVDEILREM 497
Query: 71 KQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
+++N+ + + N ++ +Y + +++ + +
Sbjct: 498 EENNVDPDLITVNHVLKVYAAESKIQAMEM 527
>gi|193806501|sp|Q9C7F1.2|PPR61_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g28020
Length = 566
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 140/276 (50%), Gaps = 10/276 (3%)
Query: 9 LSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTE-KAEELF 67
L D+A R+ L+ V G+ E++FE +P +A+ YT+LL+ YA + T KAE F
Sbjct: 102 LIPEDFAARLHLIENVVGLEEAEKFFESIPKNARGDSVYTSLLNSYARSDKTLCKAEATF 161
Query: 68 ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAAT 127
++++ L + YN MM+LY ++ EKV ++ E+K +V D T N + +A
Sbjct: 162 QKMRDLGLLLRPVPYNAMMSLYSALKNREKVEELLLEMKDNDVEADNVTVNNVLKLYSAV 221
Query: 128 LNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWI 187
++ +++KFL++ G +W +++ Y+ A A L E+ + Q+
Sbjct: 222 CDVTEMEKFLNKWEGIHGIKLEWHTTLDMAKAYLRARSSGKA-MKMLRLTEQLVDQKSLK 280
Query: 188 T-YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN---YICILSSYLMLGHLKEVGEI 243
+ YD L+ LY GN++++ ++WK + K K+ R+ Y ++ S L + + EI
Sbjct: 281 SAYDHLMKLYGEAGNREEVLRVWK---LYKSKIGERDNNGYRTVIRSLLKVDDIVGAEEI 337
Query: 244 IDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 279
W +S +FD L + D G+TEKA +
Sbjct: 338 YKVW-ESLPLEFDHRIPTMLASGYRDRGMTEKAEKL 372
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 13 DYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGA--KWTEKAEELFERV 70
DYA R+ L V G+ E+YFE +P + K Y ALL YA + +E+ +
Sbjct: 438 DYAARLYLTENVLGLEEAEKYFENIPENMKDYSVYVALLSSYAKSDKNLGNMVDEILREM 497
Query: 71 KQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
+++N+ + + N ++ +Y + +++ + +
Sbjct: 498 EENNVDPDLITVNHVLKVYAAESKIQAMEM 527
>gi|255581582|ref|XP_002531596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528792|gb|EEF30799.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 300
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 104/194 (53%), Gaps = 2/194 (1%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M + F L+ D A R+DLM+KV GI E+YFE +P K E Y ALL+ YA AK
Sbjct: 107 MSDKRYFALTSRDVAIRLDLMSKVLGIEQAEKYFENVPQKLKVLEVYNALLNCYAYAKSV 166
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
+KAE + + ++ + L YN M+ L+ G +K+ ++ E++ + D FT +
Sbjct: 167 DKAEAVMQNMRDLGFAGKTLTYNVMLNLHYQTGNFKKLEALMLEMEENGIAYDRFTLGIQ 226
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
+S+ AA +I +++K + M D+ DW Y + N Y A L++ L ++E
Sbjct: 227 LSAYAAICDIQRMEKIMSRMESDANVVTDWCNYAIVANGYRKAG-LMDKALEMLKKSEGL 285
Query: 181 IT-QRQWITYDFLI 193
IT +++ Y+FL+
Sbjct: 286 ITGKKRSSAYNFLL 299
>gi|414877074|tpg|DAA54205.1| TPA: hypothetical protein ZEAMMB73_351899 [Zea mays]
Length = 613
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 147/320 (45%), Gaps = 39/320 (12%)
Query: 9 LSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFE 68
L + DYA R+DL KV+G+H E+Y E +P S ++ Y LL +K+E++F
Sbjct: 210 LGERDYAARVDLTAKVYGLHKAEQYIEKIPASHRSEVVYRTLLANCVAEGNVKKSEQVFN 269
Query: 69 RVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATL 128
R+K N+++ LY + + +K+A V+ +++++V P IFTY + + +
Sbjct: 270 RMKDLGFPVTTFSSNQLLLLYKRLDK-KKIADVLTMMEKEDVKPSIFTYKVLVDAKGMVG 328
Query: 129 NIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA-EKSITQRQWI 187
+++ ++K ++ M D G D + YI AE TL+E+ E Q+
Sbjct: 329 DVEAMEKVVESMVKD-GIEPDLTFNATIARQYIFNGQRDKAE--TLLESMEGDDIQKNRA 385
Query: 188 TYDFLIILYAGLGNKDKIDQIWK----SLRMTK--------------------------- 216
FL+ LYA LGN D +++IWK + R+ +
Sbjct: 386 ACKFLLPLYAFLGNGDAVERIWKVCEDNTRIDECLSAIDAFGKLGNVEKAEKVFEDMFVK 445
Query: 217 -QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEK 275
+ ++S+ Y +L Y +L + GE + + + F N L+ ++D G EK
Sbjct: 446 WKNLSSKYYTALLKVYAN-QNLLDKGEELAKRMDEEGAKFGTPTLNALVKLYADAGEVEK 504
Query: 276 ANE-FHMLLLQKNCAPTNAS 294
A H L L+ N P+ +S
Sbjct: 505 AESLLHKLSLKNNVKPSYSS 524
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 63/126 (50%), Gaps = 3/126 (2%)
Query: 18 IDLMTKVFGIHSGERYFEGLPLSAK--TSETYTALLHLYAGAKWTEKAEELFERVKQSNL 75
ID K+ + E+ FE + + K +S+ YTALL +YA +K EEL +R+ +
Sbjct: 423 IDAFGKLGNVEKAEKVFEDMFVKWKNLSSKYYTALLKVYANQNLLDKGEELAKRMDEEGA 482
Query: 76 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK-NVVPDIFTYNLWISSCAATLNIDQVK 134
F N ++ LY G+VEK ++ ++ K NV P +Y + S + ++ +
Sbjct: 483 KFGTPTLNALVKLYADAGEVEKAESLLHKLSLKNNVKPSYSSYMTLLDSYSKKGDVHNSE 542
Query: 135 KFLDEM 140
K +++
Sbjct: 543 KVFNKL 548
>gi|255646331|gb|ACU23650.1| unknown [Glycine max]
Length = 80
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 58/74 (78%)
Query: 214 MTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLT 273
MTKQKM SRNY+CI+ SYLMLG KEVGE+IDQWKQS T DFD+ AC ++L F D+GL
Sbjct: 1 MTKQKMISRNYMCIIFSYLMLGFTKEVGEVIDQWKQSTTPDFDMLACKKILVVFRDIGLA 60
Query: 274 EKANEFHMLLLQKN 287
E AN +++ ++KN
Sbjct: 61 EIANNLNVIFIEKN 74
>gi|255553773|ref|XP_002517927.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542909|gb|EEF44445.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 507
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 136/273 (49%), Gaps = 4/273 (1%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M + F LS SD A R++L+ +V+G E YFE + K+ Y ALL Y
Sbjct: 106 MTDCRYFSLSPSDVAVRLELIYRVYGSAHAEMYFEKISDKLKSGNVYGALLSGYVRENSV 165
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
+KAE + + +++ ++ ++ YN M+ LY G EK+ ++ EE++R + D +T
Sbjct: 166 QKAEAVLQEMREKGIATSSFPYNIMINLYAQNGAFEKIDILKEEMERNGIPQDKYTMRNL 225
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
+++ A +I +++ L+++ W Y + Y+ L+ L + E++
Sbjct: 226 MAAYVAASDISGMERILNQLETHPQLGHGWQAYSVAASGYLKVG-LIEKALKMLRKMEET 284
Query: 181 IT-QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 239
+ ++ +++L+ LYA G KD++ ++W S + + + + C++SS + ++
Sbjct: 285 MPIGKKTSAFNYLLTLYAKTGRKDELYRVWNSYKPLAE-VKETQFCCMISSLEKVDDIEG 343
Query: 240 VGEIIDQWKQSATSDFDISACNRLLGAFSDVGL 272
I ++W +S +D N+LL A+ GL
Sbjct: 344 AERIFEEW-ESQCMMYDFRVLNKLLLAYCRKGL 375
>gi|413950397|gb|AFW83046.1| hypothetical protein ZEAMMB73_939845 [Zea mays]
Length = 453
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 121/282 (42%), Gaps = 37/282 (13%)
Query: 9 LSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFE 68
LS D+A R+DL+ K + E Y+ L A LLH Y + E
Sbjct: 142 LSSWDHAARLDLIAKAYSTSQAEEYYNKLQSPATRQAASFPLLHCY-----------VME 190
Query: 69 RVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATL 128
R EKV V++ +KR N+ ++ +YNLW+++CA
Sbjct: 191 R------------------------DHEKVLSVIDLMKRNNIHRNVLSYNLWMNACAEVS 226
Query: 129 NIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWIT 188
+D V+ M D W Y L NI+ + L + LV+AE ++ +
Sbjct: 227 GVDSVQSVFQVMLNDETVKVGWSTYCTLANIF-RKNGLNTEAQACLVKAEAKLSPTGRLG 285
Query: 189 YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK 248
Y F++ YA L + D + ++W++ + ++ + Y+ +S + +G + + I +W
Sbjct: 286 YSFVMTCYAALNDSDGVMRMWEASKSVPGRILTAYYMAAMSCSIKVGDISQAECIFGKW- 344
Query: 249 QSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
++ D+ N LLGA+ EKA H+ +L+K P
Sbjct: 345 EAGCRKHDVRVSNVLLGAYVRNRWIEKAERLHLHMLEKGACP 386
>gi|255553777|ref|XP_002517929.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542911|gb|EEF44447.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 446
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 134/274 (48%), Gaps = 6/274 (2%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M LS SD R++L+ +++G E+YFE LP K E Y ALL Y
Sbjct: 66 MADRPNLTLSPSDVVVRLELVHRIYGSAHAEKYFEKLPDKFKCREVYCALLSGYVQESSV 125
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
KAE + E ++ ++ + YN ++ LY G EK+ ++++E++ VV +T +
Sbjct: 126 RKAEAIMEEMRAKGMANSCFPYNLLINLYPKNGDYEKINMLIQEMETNGVVRGAYTMSNL 185
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
+++ A NI +++ L+++ D +DW Y + Y+ L+ + L + E
Sbjct: 186 MAAYVAASNISGMERILNQIEKDPQLGNDWRVYSVAASGYLKFG-LIEKALTMLRKLEDV 244
Query: 181 IT-QRQWITYDFLIILYAGLGNKDKIDQIWKSLR-MTKQKMTSRNYICILSSYLMLGHLK 238
+ +++ +D L+ LY G +D++ +W + + + + K TS + ++SS L +K
Sbjct: 245 MPLEKKTSAFDILVTLYGKTGKRDELYLVWNTYKPLIELKETS--VMTMISSLSKLDDIK 302
Query: 239 EVGEIIDQWKQSATSDFDISACNRLLGAFSDVGL 272
+I +W +S +D N LL A+ GL
Sbjct: 303 GAEKIFREW-ESQCMMYDFRVLNTLLFAYCRKGL 335
>gi|168006155|ref|XP_001755775.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693094|gb|EDQ79448.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 429
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 131/268 (48%), Gaps = 3/268 (1%)
Query: 12 SDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVK 71
+D RIDL +K+ E+ E P KT Y LL Y + +KA L E++K
Sbjct: 18 ADNIVRIDLKSKMKQFTVAEQLLENSPPEFKTELAYHTLLKNYVDHQMAQKAGALLEKLK 77
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
+ L +N+MM LY G K+ ++E++K V D++TYN+ + + + +I+
Sbjct: 78 STGLLTLPFSFNQMMLLYKRKGMENKLPEILEDMKAHGVPKDVYTYNILMDVKSRSGDIE 137
Query: 132 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 191
++K +E+ D D + L + A L A+ L E E+ R YD
Sbjct: 138 GMEKIFEELKADENVKADAATFGTLATACVHAGLLEKAK-VYLKEMEEGDIFRNRSAYDI 196
Query: 192 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 251
LI Y +G+ D ++++W+ ++ + +++R+YI ++ ++ LG +++ E+ + QS
Sbjct: 197 LISQYGAVGDVDGVERVWEKVK-SGPIVSNRSYITVIEAFGKLGMVEKAEELYEVMSQSK 255
Query: 252 TSDFDISACNRLLGAFSDVGLTEKANEF 279
N LL A++ GL +KA +
Sbjct: 256 GLILS-RQFNSLLSAYTRQGLMDKAEKL 282
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 74/157 (47%), Gaps = 4/157 (2%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 102
++ +Y ++ + EKAEEL+E + QS + +N +++ Y G ++K ++
Sbjct: 224 SNRSYITVIEAFGKLGMVEKAEELYEVMSQSKGLILSRQFNSLLSAYTRQGLMDKAEKLM 283
Query: 103 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS--GGSDDWVK-YVNLVNI 159
+++++ + TY+ ++ T +D+ + E D G S W + V +++
Sbjct: 284 DDMEKLGRKKNAITYHHLVTGYLKTDQLDKAVAAMKEALVDPKQGRSKPWFETLVAVLDA 343
Query: 160 YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILY 196
+ ++VNAE E +K+ + Y+ L+ Y
Sbjct: 344 FAERGNVVNAEQQ-FQEIKKAYPRLNIQVYNILLKAY 379
>gi|6958202|gb|AAF32491.1|AF091837_1 DNA-binding protein [Triticum aestivum]
Length = 612
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 139/286 (48%), Gaps = 19/286 (6%)
Query: 9 LSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFE 68
L + DYA+R+DL+ KV G++ E+Y + +P+S + Y LL +K+EE+F
Sbjct: 210 LGERDYASRLDLVAKVHGVYKAEKYIDSIPISHRGEIVYRTLLANCVSEANVKKSEEVFN 269
Query: 69 RVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATL 128
++K N+++ LY V + +K+A V+ +++++NV P +FTY L + + A
Sbjct: 270 KMKDLGFPVTVFAINQLLLLYKRVDK-KKIADVLAKMEKENVKPSLFTYKLLVDTKGAIR 328
Query: 129 NIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWIT 188
+I ++K ++ M + G D + + YI A H AE + L E +
Sbjct: 329 DIAGMEKVVESMQAE-GVEPDLLFQATIAKHYIFAGHREKAE-AILESMEGGDIKGNRNA 386
Query: 189 YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICI--LSSYLMLGHLKEVGEIIDQ 246
L+ LYA LG KD ++++W+ + R C+ + S+ LG ++ ++ +
Sbjct: 387 CKILLPLYAFLGKKDDVERMWQVC-----EANPRLDECLSAIESFGRLGDVERAEKVFED 441
Query: 247 ----WKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 288
WK + +S F N L+ ++D L +K E + + C
Sbjct: 442 MFATWK-TLSSKF----YNALMKVYADQNLFKKGKELAKRMDEDGC 482
Score = 43.9 bits (102), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 74/153 (48%), Gaps = 4/153 (2%)
Query: 18 IDLMTKVFGIHSGERYFEGLPLSAKT--SETYTALLHLYAGAKWTEKAEELFERVKQSNL 75
I+ ++ + E+ FE + + KT S+ Y AL+ +YA +K +EL +R+ +
Sbjct: 423 IESFGRLGDVERAEKVFEDMFATWKTLSSKFYNALMKVYADQNLFKKGKELAKRMDEDGC 482
Query: 76 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKN-VVPDIFTYNLWISSCAATLNIDQVK 134
+ ++ LY+ G+V+K ++ ++ + N + P +Y + + + + +I +
Sbjct: 483 RLGISTIDSLVKLYVGAGEVDKAESILHKLSKSNKMKPQYSSYLMLLDTYSKKGDIHNSE 542
Query: 135 KFLDEMSCDSGGSDDWVKYVNLVNIYITASHLV 167
K D++ G + +Y L+N Y+ A V
Sbjct: 543 KVFDQLR-QMGYNGRVRQYQLLLNAYVHAKTPV 574
>gi|296086986|emb|CBI33242.3| unnamed protein product [Vitis vinifera]
Length = 335
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 100/202 (49%), Gaps = 37/202 (18%)
Query: 8 VLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELF 67
S +++A ++DL+ +V G S E YF L KT +TY ALL+ Y + T+K+
Sbjct: 104 AFSPTEHAVQLDLIGRVRGFLSAESYFNSLQNHDKTDKTYGALLNCYVRQRQTDKSLSHL 163
Query: 68 ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAAT 127
+++K+ + + L YN++M LY +VGQ EKV V+ E+K+ NV PD F+Y + I+S A
Sbjct: 164 QKMKEMGFASSPLTYNDIMCLYTNVGQHEKVPDVLTEMKQSNVYPDNFSYRICINSYGAQ 223
Query: 128 LNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWI 187
+I ++ L EM E+ R +
Sbjct: 224 SDIQGMENVLKEM-------------------------------------ERQPHIRDGL 246
Query: 188 TYDFLIILYAGLGNKDKIDQIW 209
Y+ LI LYA LGNK ++ ++W
Sbjct: 247 GYNHLISLYASLGNKAEVLRLW 268
>gi|357131430|ref|XP_003567340.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Brachypodium distachyon]
Length = 612
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 139/287 (48%), Gaps = 22/287 (7%)
Query: 9 LSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFE 68
L + DYA+R+DLM KV GI+ E++ + +P S + Y LL +KAEE+F
Sbjct: 210 LVERDYASRLDLMAKVHGIYKAEKFIDNIPASLRGEIVYRTLLANCVAEVNVKKAEEVFN 269
Query: 69 RVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATL 128
++K N+++ LY V + +K++ V+ +++++V P +FTY L + + A+
Sbjct: 270 KMKDLGFPVTVFAINQLLLLYKRVDK-KKISDVLTMMEKEDVKPSLFTYKLLVDTKGASR 328
Query: 129 NIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWIT 188
+I+ ++K + M + G + D + + YI H AE+ ++E+ + +
Sbjct: 329 DIEGMEKVVQSMEAE-GITPDLLLQATIAKHYIFGGHREKAEA--ILESMEGDMKENRNA 385
Query: 189 YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV-------G 241
++ LYA LG KD +++IWK + +R C LS+ G L +V G
Sbjct: 386 CKMVMPLYAFLGKKDDVERIWKVC-----QSNTRLDEC-LSAIEAFGRLGDVEKAEEVFG 439
Query: 242 EIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 288
+ WK ++ + N ++ +++ L +K E + + C
Sbjct: 440 NMFKTWKTLSSKYY-----NAMMRVYANQNLMDKGKELAKRMEEDGC 481
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 54/109 (49%), Gaps = 3/109 (2%)
Query: 18 IDLMTKVFGIHSGERYFEGLPLSAKT--SETYTALLHLYAGAKWTEKAEELFERVKQSNL 75
I+ ++ + E F + + KT S+ Y A++ +YA +K +EL +R+++
Sbjct: 422 IEAFGRLGDVEKAEEVFGNMFKTWKTLSSKYYNAMMRVYANQNLMDKGKELAKRMEEDGC 481
Query: 76 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKN-VVPDIFTYNLWISS 123
+ ++ LY+ G+VEK ++ ++ KN + P +Y + + S
Sbjct: 482 RLGISTLDSLVKLYVDAGEVEKAESLLHKLSVKNKMKPQYSSYLMLLDS 530
>gi|125525413|gb|EAY73527.1| hypothetical protein OsI_01409 [Oryza sativa Indica Group]
Length = 611
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 138/287 (48%), Gaps = 13/287 (4%)
Query: 5 KEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAE 64
K F L + DYA+R+DL+ KV GI+ E+Y E +P S + Y LL +K E
Sbjct: 204 KLFDLGERDYASRVDLVAKVHGIYKAEKYIENVPASHRGEVVYRTLLANCVAIANVKKTE 263
Query: 65 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 124
++F ++K N+++ LY V + +K+ V+ ++++NV P +FTY L + +
Sbjct: 264 QVFNKMKDLGFPVTVFSCNQLLLLYKRVDK-KKLGDVLTMMEKENVKPSLFTYKLLVDTK 322
Query: 125 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR 184
AT +I+ ++K + M D G D + + YI + AE + L + E
Sbjct: 323 GATRDIEDMEKVIQAMQAD-GIEPDLLIQATIARHYIFGGYREKAE-AILEQIEGDDINE 380
Query: 185 QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICI--LSSYLMLGHLKEVGE 242
F++ LYA LG K +++IWK ++ +R C+ + ++ LG +++ E
Sbjct: 381 NRSACKFVLPLYAFLGKKADVERIWKVC-----EVNARLDECMSAIEAFGKLGDVEKAEE 435
Query: 243 IIDQ-WKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 288
I + +K T F+ N +L +++ L +K E + C
Sbjct: 436 IFENMFKTWKTLSFEYY--NAMLKVYANKKLFDKGKELAKRMGDDGC 480
Score = 43.9 bits (102), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 2/106 (1%)
Query: 18 IDLMTKVFGIHSGERYFEGLPLSAKT--SETYTALLHLYAGAKWTEKAEELFERVKQSNL 75
I+ K+ + E FE + + KT E Y A+L +YA K +K +EL +R+
Sbjct: 421 IEAFGKLGDVEKAEEIFENMFKTWKTLSFEYYNAMLKVYANKKLFDKGKELAKRMGDDGC 480
Query: 76 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 121
+ ++ LY G+VEK ++ ++ KN + ++T L +
Sbjct: 481 RLGPSTLDSLVKLYSDAGEVEKADSILHKLSYKNKIKPLYTTYLML 526
>gi|224154848|ref|XP_002337528.1| predicted protein [Populus trichocarpa]
gi|222839519|gb|EEE77856.1| predicted protein [Populus trichocarpa]
Length = 87
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/58 (75%), Positives = 53/58 (91%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAK 58
MV H+EFVLSD+D+A+RIDLMTKVFG+ + ERYF+GLPL+AKT+ETYTALLH YA AK
Sbjct: 28 MVAHEEFVLSDTDHASRIDLMTKVFGVDAAERYFDGLPLAAKTTETYTALLHSYAAAK 85
>gi|302788498|ref|XP_002976018.1| hypothetical protein SELMODRAFT_415910 [Selaginella moellendorffii]
gi|300156294|gb|EFJ22923.1| hypothetical protein SELMODRAFT_415910 [Selaginella moellendorffii]
Length = 603
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 134/278 (48%), Gaps = 15/278 (5%)
Query: 6 EFVLSDSDY-------ATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAK 58
E+V+ + DY + ++++ + GI + E+ FE L KT Y ALL Y
Sbjct: 205 EWVVDEPDYKDFKLARSFQLEITARSKGIAAAEKLFEELSAEEKTRPVYNALLTRYVFLH 264
Query: 59 WTEKAEELFERVKQSN-LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTY 117
+KAE LFE + ++ LS + N MM LY G K ++E+ K V P+IFTY
Sbjct: 265 NVKKAEGLFEEMDKAGFLSQSPFALNLMMKLYKHKGDNAKFQEMLEKAKDVAVEPNIFTY 324
Query: 118 NLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA 177
N+ + A +++ ++K +EM + D Y L Y+ A AE S L+
Sbjct: 325 NVMLDLKAKAGDVEGMEKIFEEMKLNPNAKPDGTSYFTLCKGYLKAGLTDKAEVS-LLRM 383
Query: 178 EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHL 237
E +R T++++++ Y LG ++++W+ +M + +++ + + G +
Sbjct: 384 EVGPFRRTKATFEYMMLAYGQLGLISDVERMWQKCKMVPGDGFN-SFLAFQRAMALAGEV 442
Query: 238 KEVGEI---IDQWKQSATSDFDISACNRLLGAFSDVGL 272
+ V + +D+WK+S T D+ N LL A+ G+
Sbjct: 443 QRVDSMFKHMDKWKRSKT--VDLKRHNNLLLAYYKKGM 478
>gi|11138066|dbj|BAB17739.1| putative DNA-binding protein [Oryza sativa Japonica Group]
Length = 591
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 137/287 (47%), Gaps = 13/287 (4%)
Query: 5 KEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAE 64
K F L + DYA+R+DL+ KV GI+ E+Y E +P S + Y LL +K E
Sbjct: 184 KLFDLGERDYASRVDLVAKVHGIYKAEKYIENVPASHRGEVVYRTLLANCVAIANVKKTE 243
Query: 65 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 124
++F ++K N+++ LY V + +K+ V+ ++++NV P +FTY L + +
Sbjct: 244 QVFNKMKDLGFPVTVFSCNQLLLLYKRVDK-KKLGDVLTMMEKENVKPSLFTYKLLVDTK 302
Query: 125 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR 184
A +I+ ++K + M D G D + + YI + AE + L + E
Sbjct: 303 GAARDIEDMEKVIQAMQAD-GIEPDLLIQATIARHYIFGGYREKAE-AILEQIEGDDINE 360
Query: 185 QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICI--LSSYLMLGHLKEVGE 242
F++ LYA LG K +++IWK ++ +R C+ + ++ LG +++ E
Sbjct: 361 NRSACKFVLPLYAFLGKKADVERIWKVC-----EVNARLDECMSAIEAFGKLGDVEKAEE 415
Query: 243 IIDQ-WKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 288
I + +K T F+ N +L +++ L +K E + C
Sbjct: 416 IFENMFKTWKTLSFEYY--NAMLKVYANKKLFDKGKELAKRMGDDGC 460
Score = 43.9 bits (102), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 2/106 (1%)
Query: 18 IDLMTKVFGIHSGERYFEGLPLSAKT--SETYTALLHLYAGAKWTEKAEELFERVKQSNL 75
I+ K+ + E FE + + KT E Y A+L +YA K +K +EL +R+
Sbjct: 401 IEAFGKLGDVEKAEEIFENMFKTWKTLSFEYYNAMLKVYANKKLFDKGKELAKRMGDDGC 460
Query: 76 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 121
+ ++ LY G+VEK ++ ++ KN + ++T L +
Sbjct: 461 RLGPSTLDSLVKLYSDAGEVEKADSILHKLSYKNKIKPLYTTYLML 506
>gi|56783681|dbj|BAD81093.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|56784204|dbj|BAD81589.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|125569936|gb|EAZ11451.1| hypothetical protein OsJ_01319 [Oryza sativa Japonica Group]
Length = 611
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 137/287 (47%), Gaps = 13/287 (4%)
Query: 5 KEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAE 64
K F L + DYA+R+DL+ KV GI+ E+Y E +P S + Y LL +K E
Sbjct: 204 KLFDLGERDYASRVDLVAKVHGIYKAEKYIENVPASHRGEVVYRTLLANCVAIANVKKTE 263
Query: 65 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 124
++F ++K N+++ LY V + +K+ V+ ++++NV P +FTY L + +
Sbjct: 264 QVFNKMKDLGFPVTVFSCNQLLLLYKRVDK-KKLGDVLTMMEKENVKPSLFTYKLLVDTK 322
Query: 125 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR 184
A +I+ ++K + M D G D + + YI + AE + L + E
Sbjct: 323 GAARDIEDMEKVIQAMQAD-GIEPDLLIQATIARHYIFGGYREKAE-AILEQIEGDDINE 380
Query: 185 QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICI--LSSYLMLGHLKEVGE 242
F++ LYA LG K +++IWK ++ +R C+ + ++ LG +++ E
Sbjct: 381 NRSACKFVLPLYAFLGKKADVERIWKVC-----EVNARLDECMSAIEAFGKLGDVEKAEE 435
Query: 243 IIDQ-WKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 288
I + +K T F+ N +L +++ L +K E + C
Sbjct: 436 IFENMFKTWKTLSFEYY--NAMLKVYANKKLFDKGKELAKRMGDDGC 480
Score = 43.9 bits (102), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 2/106 (1%)
Query: 18 IDLMTKVFGIHSGERYFEGLPLSAKT--SETYTALLHLYAGAKWTEKAEELFERVKQSNL 75
I+ K+ + E FE + + KT E Y A+L +YA K +K +EL +R+
Sbjct: 421 IEAFGKLGDVEKAEEIFENMFKTWKTLSFEYYNAMLKVYANKKLFDKGKELAKRMGDDGC 480
Query: 76 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 121
+ ++ LY G+VEK ++ ++ KN + ++T L +
Sbjct: 481 RLGPSTLDSLVKLYSDAGEVEKADSILHKLSYKNKIKPLYTTYLML 526
>gi|297596551|ref|NP_001042753.2| Os01g0280400 [Oryza sativa Japonica Group]
gi|255673117|dbj|BAF04667.2| Os01g0280400, partial [Oryza sativa Japonica Group]
Length = 426
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 137/287 (47%), Gaps = 13/287 (4%)
Query: 5 KEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAE 64
K F L + DYA+R+DL+ KV GI+ E+Y E +P S + Y LL +K E
Sbjct: 19 KLFDLGERDYASRVDLVAKVHGIYKAEKYIENVPASHRGEVVYRTLLANCVAIANVKKTE 78
Query: 65 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 124
++F ++K N+++ LY V + +K+ V+ ++++NV P +FTY L + +
Sbjct: 79 QVFNKMKDLGFPVTVFSCNQLLLLYKRVDK-KKLGDVLTMMEKENVKPSLFTYKLLVDTK 137
Query: 125 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR 184
A +I+ ++K + M D G D + + YI + AE + L + E
Sbjct: 138 GAARDIEDMEKVIQAMQAD-GIEPDLLIQATIARHYIFGGYREKAE-AILEQIEGDDINE 195
Query: 185 QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICI--LSSYLMLGHLKEVGE 242
F++ LYA LG K +++IWK ++ +R C+ + ++ LG +++ E
Sbjct: 196 NRSACKFVLPLYAFLGKKADVERIWKVC-----EVNARLDECMSAIEAFGKLGDVEKAEE 250
Query: 243 IIDQ-WKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 288
I + +K T F+ N +L +++ L +K E + C
Sbjct: 251 IFENMFKTWKTLSFEYY--NAMLKVYANKKLFDKGKELAKRMGDDGC 295
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 69/149 (46%), Gaps = 4/149 (2%)
Query: 18 IDLMTKVFGIHSGERYFEGLPLSAKT--SETYTALLHLYAGAKWTEKAEELFERVKQSNL 75
I+ K+ + E FE + + KT E Y A+L +YA K +K +EL +R+
Sbjct: 236 IEAFGKLGDVEKAEEIFENMFKTWKTLSFEYYNAMLKVYANKKLFDKGKELAKRMGDDGC 295
Query: 76 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIF-TYNLWISSCAATLNIDQVK 134
+ ++ LY G+VEK ++ ++ KN + ++ TY + + S + ++ +
Sbjct: 296 RLGPSTLDSLVKLYSDAGEVEKADSILHKLSYKNKIKPLYTTYLMLLDSYSKKGDVHNAE 355
Query: 135 KFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
K ++ G + +Y L+ Y+ A
Sbjct: 356 KLFSKVR-QMGYTGRIRQYQLLLEAYLNA 383
>gi|357509403|ref|XP_003624990.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500005|gb|AES81208.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 623
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 146/293 (49%), Gaps = 26/293 (8%)
Query: 4 HKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKA 63
H EFV + DYA+++DL+ K+ G+H E Y E +P S + Y LL +KA
Sbjct: 219 HLEFV--ERDYASQLDLIAKLHGLHKAEVYIEKIPESFRGEIIYRTLLANCVTQNNLKKA 276
Query: 64 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 123
EE+F ++K N+++ LY + +K+A V+ ++++NV P T+ + I
Sbjct: 277 EEIFNKMKDLEFPLTPFACNQLLLLYKRTDK-KKIADVLLLMEQENVKPSPLTFKILIDV 335
Query: 124 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAE-KSIT 182
+ +ID + + +D+M + D++ K V LV YI+ H A+ L E E +++
Sbjct: 336 KGQSNDIDGMDQIVDQMRAEGIEPDNYTKAV-LVGHYISGGHDDKAK-MLLKEMEGENLK 393
Query: 183 QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 242
+ +W+ L+ LYA LG D++ ++WK + + + + + + + ++ G LK++ E
Sbjct: 394 ENRWVCR-LLLALYAKLGMADEVGRVWK---VCETRPSVEDCVAAIEAW---GKLKKIDE 446
Query: 243 -------IIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 288
+ +WK ++ + C+ LL +++ + K + + K C
Sbjct: 447 AEAVFEVMARKWKLTSKN------CSVLLNVYANNKMLTKGKDLIKRMAHKGC 493
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 61/130 (46%), Gaps = 2/130 (1%)
Query: 13 DYATRIDLMTKVFGIHSGERYFEGLPLSAK-TSETYTALLHLYAGAKWTEKAEELFERVK 71
D I+ K+ I E FE + K TS+ + LL++YA K K ++L +R+
Sbjct: 430 DCVAAIEAWGKLKKIDEAEAVFEVMARKWKLTSKNCSVLLNVYANNKMLTKGKDLIKRMA 489
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE-IKRKNVVPDIFTYNLWISSCAATLNI 130
L +N ++ LY+ G+VEK V+++ I++ V P +YN + + +I
Sbjct: 490 HKGCRIGPLTWNALVKLYVQAGEVEKADSVLQKAIQQSPVRPIFSSYNTLLEEYSKRGDI 549
Query: 131 DQVKKFLDEM 140
+K M
Sbjct: 550 HNSEKIFYRM 559
>gi|302764000|ref|XP_002965421.1| hypothetical protein SELMODRAFT_406783 [Selaginella moellendorffii]
gi|300166235|gb|EFJ32841.1| hypothetical protein SELMODRAFT_406783 [Selaginella moellendorffii]
Length = 584
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 121/251 (48%), Gaps = 8/251 (3%)
Query: 26 GIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSN-LSFNALMYNE 84
GI + E+ FE L KT Y ALL Y +KAE LFE + ++ LS + N
Sbjct: 213 GIAAAEKLFEELSAEEKTRPVYNALLTRYVFLHNVKKAEGLFEEMDKAGFLSQSPFALNL 272
Query: 85 MMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS 144
MM LY G K ++E+ K V P+IFTYN+ + A +++ ++K +EM +
Sbjct: 273 MMKLYKHKGDNAKFQEMLEKAKDVAVEPNIFTYNVMLDLKAKAGDVEGMEKIFEEMKLNP 332
Query: 145 GGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDK 204
D Y L Y+ A AE S L+ E +R T++++++ Y LG
Sbjct: 333 NAKPDGTSYFTLCKGYLKAGLTDKAEVS-LLRMEVGPFRRTKATFEYMMLAYGQLGLISD 391
Query: 205 IDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI---IDQWKQSATSDFDISACN 261
++++W+ +M + +++ + + G ++ V + +D+WK+S T D+ N
Sbjct: 392 VERMWQKCKMVPGDGFN-SFLAFQRAMALAGEVQRVDSMFKHMDKWKRSKT--VDLKRHN 448
Query: 262 RLLGAFSDVGL 272
LL A+ G+
Sbjct: 449 NLLLAYYKKGM 459
>gi|148906608|gb|ABR16456.1| unknown [Picea sitchensis]
Length = 600
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 130/284 (45%), Gaps = 5/284 (1%)
Query: 5 KEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAE 64
K F ++ DYA+R+D++TK+ GI GE+YF +P + Y LL Y+ EKAE
Sbjct: 192 KPFKKTERDYASRLDVITKILGIFKGEKYFASIPSDMRGQRAYGTLLANYSSTCNVEKAE 251
Query: 65 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 124
E+F+++K S A YN+++ LY + + +K+ V++ ++ + V P IFTY + I
Sbjct: 252 EIFKKMKAEGFSLTAFEYNQLLLLYKRLDK-KKIQDVLKMMEDEGVKPTIFTYKILIDVK 310
Query: 125 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR 184
+I +++ + M + D + L YI A AE L E E +
Sbjct: 311 GWMGDIGGMEQVAENMKSEDIEMDSGTLEL-LARHYIRAGLAEKAE-VVLKELENVSLKD 368
Query: 185 QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEII 244
+ L+ LYA LG ++++IWK + Y + ++ LG + E EI
Sbjct: 369 KRSRLKMLLPLYAELGKPTEVERIWKDFEAFPA-LRLDEYATGVVAWGKLGQI-EKAEIT 426
Query: 245 DQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 288
+ ++ N LL ++D L K E + C
Sbjct: 427 FEKLLNSGKKLSAKHYNALLNVYADHHLLLKGKELVKRMSDNGC 470
Score = 43.9 bits (102), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 75/154 (48%), Gaps = 4/154 (2%)
Query: 13 DYATRIDLMTKVFGIHSGERYFEGLPLSAK--TSETYTALLHLYAGAKWTEKAEELFERV 70
+YAT + K+ I E FE L S K +++ Y ALL++YA K +EL +R+
Sbjct: 406 EYATGVVAWGKLGQIEKAEITFEKLLNSGKKLSAKHYNALLNVYADHHLLLKGKELVKRM 465
Query: 71 KQSNLSFNALMYNEMMTLYMSVGQVEKV-ALVVEEIKRKNVVPDIFTYNLWISSCAATLN 129
+ + +++ ++ L+++ G++EK +++ + +K + P +T + A +
Sbjct: 466 SDNGCTIEPPIWDALIRLHVNAGELEKADSILFKACNQKQLRPKYWTMVTILEKYAERGD 525
Query: 130 IDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
+ +K D M +G + + +L+ Y A
Sbjct: 526 VANAEKIFDRMR-QAGYTGSAGAFASLLKSYANA 558
>gi|226530081|ref|NP_001147602.1| DNA-binding protein [Zea mays]
gi|195612448|gb|ACG28054.1| DNA-binding protein [Zea mays]
Length = 622
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 135/278 (48%), Gaps = 17/278 (6%)
Query: 6 EFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEE 65
EFV + DYA +DL KV+G+H E+ E +P S + Y LL A +K+E+
Sbjct: 218 EFV--ERDYAAHLDLTAKVYGLHKAEQTIEKIPASCRGEIVYRTLLANCVSASNIKKSEQ 275
Query: 66 LFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCA 125
+F R+K +N+++ LY + + +K+A V+ +++++V P +FTY + + +
Sbjct: 276 VFNRMKDLGFPVTQFSFNQLLLLYKRLDR-KKIADVLAMMEKEDVKPSLFTYKILVDAKG 334
Query: 126 ATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQ 185
+ +I+ ++K ++ M DS D + YI AE + L E Q+
Sbjct: 335 SVGDIEAMEKVIESMEKDS-IEPDLTFNATIARHYIFYGQREKAE-ALLKAMEGDDIQKN 392
Query: 186 WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIID 245
L+ L+A LGN D +++IWK+ + S + + ++ LG +++ ++ +
Sbjct: 393 RAACKTLLPLHAFLGNSDAVERIWKACEDNTRVAES---VSAIEAFGKLGDVEKAEKVFE 449
Query: 246 ----QWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 279
WK + +S F N LL ++D L +K E
Sbjct: 450 DMLVHWK-TLSSKF----YNALLKVYADHNLLDKGKEL 482
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 78/149 (52%), Gaps = 4/149 (2%)
Query: 18 IDLMTKVFGIHSGERYFEGLPLSAKT--SETYTALLHLYAGAKWTEKAEELFERVKQSNL 75
I+ K+ + E+ FE + + KT S+ Y ALL +YA +K +EL +R+ ++ +
Sbjct: 432 IEAFGKLGDVEKAEKVFEDMLVHWKTLSSKFYNALLKVYADHNLLDKGKELAKRMDENRV 491
Query: 76 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIF-TYNLWISSCAATLNIDQVK 134
F A + ++ LY+ G+VEK +V ++ +N + I+ TY + S + ++ +
Sbjct: 492 RFGAPTLDALVKLYVEAGEVEKAESLVHKLSIQNHIKPIYNTYMTLLDSYSKKGDVRNSE 551
Query: 135 KFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
K +++ SG + Y +L++ Y+ A
Sbjct: 552 KVFNKLR-QSGYTGRIRMYQSLLHAYVHA 579
>gi|413946863|gb|AFW79512.1| DNA-binding protein [Zea mays]
Length = 622
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 135/278 (48%), Gaps = 17/278 (6%)
Query: 6 EFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEE 65
EFV + DYA +DL KV+G+H E+ E +P S + Y LL A +K+E+
Sbjct: 218 EFV--ERDYAAHLDLTAKVYGLHKAEQTIEKIPASCRGEIVYRTLLANCVSASNIKKSEQ 275
Query: 66 LFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCA 125
+F R+K +N+++ LY + + +K+A V+ +++++V P +FTY + + +
Sbjct: 276 VFNRMKDLGFPVTQFSFNQLLLLYKRLDR-KKIADVLAMMEKEDVKPSLFTYKILVDAKG 334
Query: 126 ATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQ 185
+ +I+ ++K ++ M DS D + YI AE + L E Q+
Sbjct: 335 SVGDIEAMEKVIESMEKDS-IEPDLTFNATIARHYIFYGQREKAE-ALLKAMEGDDIQKN 392
Query: 186 WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIID 245
L+ L+A LGN D +++IWK+ + S + + ++ LG +++ ++ +
Sbjct: 393 RAACKTLLPLHAFLGNSDAVERIWKACEDNTRVAES---VSAIEAFGKLGDVEKAEKVFE 449
Query: 246 ----QWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 279
WK + +S F N LL ++D L +K E
Sbjct: 450 DMLVHWK-TLSSKF----YNALLKVYADHNLLDKGKEL 482
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 77/149 (51%), Gaps = 4/149 (2%)
Query: 18 IDLMTKVFGIHSGERYFEGLPLSAKT--SETYTALLHLYAGAKWTEKAEELFERVKQSNL 75
I+ K+ + E+ FE + + KT S+ Y ALL +YA +K +EL +R+ ++ +
Sbjct: 432 IEAFGKLGDVEKAEKVFEDMLVHWKTLSSKFYNALLKVYADHNLLDKGKELAKRMDENRV 491
Query: 76 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIF-TYNLWISSCAATLNIDQVK 134
F A + ++ LY+ G+VEK +V ++ +N + I+ TY + S + ++ +
Sbjct: 492 RFGAPTLDALVKLYVEAGEVEKAESLVHKLSIQNHIKPIYNTYMTLLDSYSKKGDVRNSE 551
Query: 135 KFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
K +++ SG + Y L++ Y+ A
Sbjct: 552 KVFNKLR-QSGYTGRIRMYQVLLHAYVRA 579
>gi|125535921|gb|EAY82409.1| hypothetical protein OsI_37623 [Oryza sativa Indica Group]
Length = 611
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 134/286 (46%), Gaps = 19/286 (6%)
Query: 9 LSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFE 68
L + DYA+R+DL+ K I+ E+Y E +P S + Y LL +KAE++F
Sbjct: 208 LGERDYASRVDLVAKTHSIYKAEKYIENVPASHRGEIVYRTLLANCVAIANVKKAEQVFN 267
Query: 69 RVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATL 128
++K + N+++ LY V + +K+ V+ ++++NV P +FTY L + + A
Sbjct: 268 KMKDLGFPVSVFSCNQLLLLYKRVDK-KKLGDVLTMMEKENVKPSLFTYKLLVDTKGAAR 326
Query: 129 NIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWIT 188
+I+ ++K + M D G D + + YI + AE+ I + +
Sbjct: 327 DIEDMEKVIQAMQAD-GIEPDLLFQATIARHYIFGGYREKAEAILEQMVGDDINENRSAC 385
Query: 189 YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICI--LSSYLMLGHLKEVGEIIDQ 246
F++ LYA LG D +++IWK + +R C+ + ++ LG +++ EI D
Sbjct: 386 -KFVLPLYAFLGKNDDVERIWKVC-----EANARLDECMSAIEAFGKLGDVEKAEEIFDN 439
Query: 247 ----WKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 288
WK ++ + N +L +++ L +K E + C
Sbjct: 440 MFKTWKTLSSKYY-----NAMLKVYANKKLFDKGKELAKRMGDDGC 480
Score = 44.3 bits (103), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 52/106 (49%), Gaps = 2/106 (1%)
Query: 18 IDLMTKVFGIHSGERYFEGLPLSAKT--SETYTALLHLYAGAKWTEKAEELFERVKQSNL 75
I+ K+ + E F+ + + KT S+ Y A+L +YA K +K +EL +R+
Sbjct: 421 IEAFGKLGDVEKAEEIFDNMFKTWKTLSSKYYNAMLKVYANKKLFDKGKELAKRMGDDGC 480
Query: 76 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 121
+ ++ LY G+VEK ++ ++ KN + ++T L +
Sbjct: 481 RLGPYTLDSLVKLYSDAGEVEKADSILHKLSYKNKIKPMYTTYLML 526
>gi|115487560|ref|NP_001066267.1| Os12g0170100 [Oryza sativa Japonica Group]
gi|77553759|gb|ABA96555.1| DNA-binding protein, putative, expressed [Oryza sativa Japonica
Group]
gi|113648774|dbj|BAF29286.1| Os12g0170100 [Oryza sativa Japonica Group]
gi|125578643|gb|EAZ19789.1| hypothetical protein OsJ_35368 [Oryza sativa Japonica Group]
gi|215767656|dbj|BAG99884.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 611
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 134/286 (46%), Gaps = 19/286 (6%)
Query: 9 LSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFE 68
L + DYA+R+DL+ K I+ E+Y E +P S + Y LL +KAE++F
Sbjct: 208 LGERDYASRVDLVAKTHSIYKAEKYIENVPASHRGEIVYRTLLANCVAIANVKKAEQVFN 267
Query: 69 RVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATL 128
++K + N+++ LY V + +K+ V+ ++++NV P +FTY L + + A
Sbjct: 268 KMKDLGFPVSVFSCNQLLLLYKRVDK-KKLGDVLTMMEKENVKPSLFTYKLLVDTKGAAR 326
Query: 129 NIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWIT 188
+I+ ++K + M D G D + + YI + +E+ I + +
Sbjct: 327 DIEDMEKVIQAMQAD-GIEPDLLFQATIARHYIFGGYREKSEAILEQMVGDDINENRSAC 385
Query: 189 YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICI--LSSYLMLGHLKEVGEIIDQ 246
F++ LYA LG D +++IWK + +R C+ + ++ LG +++ EI D
Sbjct: 386 -KFVLPLYAFLGKNDDVERIWKVC-----EANARLDECMSAIEAFGKLGDVEKAEEIFDN 439
Query: 247 ----WKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 288
WK ++ + N +L +++ L +K E + C
Sbjct: 440 MFKTWKTLSSKYY-----NAMLKVYANKKLFDKGKELAKRMGDDGC 480
Score = 43.9 bits (102), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 52/106 (49%), Gaps = 2/106 (1%)
Query: 18 IDLMTKVFGIHSGERYFEGLPLSAKT--SETYTALLHLYAGAKWTEKAEELFERVKQSNL 75
I+ K+ + E F+ + + KT S+ Y A+L +YA K +K +EL +R+
Sbjct: 421 IEAFGKLGDVEKAEEIFDNMFKTWKTLSSKYYNAMLKVYANKKLFDKGKELAKRMGDDGC 480
Query: 76 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 121
+ ++ LY G+VEK ++ ++ KN + ++T L +
Sbjct: 481 RLGPYTLDSLVKLYSDAGEVEKADSILHKLSYKNKIKPMYTTYLML 526
>gi|356547249|ref|XP_003542028.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Glycine max]
Length = 507
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 138/292 (47%), Gaps = 8/292 (2%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
++ + + + DY+ ++ TK+ GI GE+ F +P+ + Y L+
Sbjct: 96 VIRERPYRPKELDYSYLVEFTTKLHGISHGEKLFSRIPVEFQNELLYNNLVIACLDKGVI 155
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
+ + E +++++ + L++N ++ L+ S G+ + + ++ ++K V P + TYN+
Sbjct: 156 KLSLEYMKKMRELGFLISHLVFNRLIILHSSPGRRKMIPKLLTQMKADKVTPHVSTYNIL 215
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
+ A N++ + KF M ++ + Y ++ I + L A + + EKS
Sbjct: 216 MKIEANEHNLENLVKFFSRMKVAQVAPNE-ISYC-ILAIAHAVARLYTATEAYVEAVEKS 273
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 240
IT W T D L++LY LGN+ +++++W ++R + S++Y+ + ++ +G L +
Sbjct: 274 ITGNNWSTLDVLLMLYGYLGNQKELERVWATIRELPS-VRSKSYMLAIEAFGRIGQLNQA 332
Query: 241 GEIIDQW--KQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
E+ W +S + N ++ + G KA + + + C P
Sbjct: 333 EEL---WLEMESTKGLKSVEQFNSMMSVYCKHGFIGKAAKLYKNMKASGCKP 381
>gi|449506007|ref|XP_004162627.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 142/310 (45%), Gaps = 36/310 (11%)
Query: 9 LSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFE 68
++ DYA+R+ L+ KV G+H E Y +P S + + ALL Y A EKAEE+F
Sbjct: 208 FNERDYASRVHLIAKVQGLHKAESYIAKIPKSFQGEVVHRALLANYVVANNVEKAEEVFN 267
Query: 69 RVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATL 128
++K + YN+M+ LY + + K+A V+ ++++N+ P FTY + I +
Sbjct: 268 KIKDLEFPMSIFAYNQMLVLYKKIDR-RKIADVLLLMEKENIKPCPFTYKILIDGKGLSN 326
Query: 129 NIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWIT 188
+I +++ +D M + G D L Y++ V A++ E + QW+
Sbjct: 327 DISGMEQVVDSMKAE-GIELDVSTLSLLAKHYVSCGLKVKAKAILKEIEETNSNGPQWLC 385
Query: 189 YDFLIILYAGLGNKDKIDQIWK--------------------------------SLRMTK 216
L+ Y L +D++ ++W+ + T
Sbjct: 386 -RILLPFYGKLQMEDEVRRLWEICEANPHIEECMAAIVAWGQLKNVQEAEKIFDRVVKTW 444
Query: 217 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
+K+++R+Y +++ Y L + E+++Q +S D+ CN ++ + + G EKA
Sbjct: 445 KKLSARHYSIMMNVYRDSKMLTKGKEVVNQMAESGCH-IDLLTCNAIVKLYVEAGEVEKA 503
Query: 277 NEFHMLLLQK 286
+ F + ++K
Sbjct: 504 DSFLVKAVKK 513
Score = 40.8 bits (94), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 23/103 (22%), Positives = 53/103 (51%), Gaps = 1/103 (0%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV-ALV 101
++ Y+ ++++Y +K K +E+ ++ +S + L N ++ LY+ G+VEK + +
Sbjct: 448 SARHYSIMMNVYRDSKMLTKGKEVVNQMAESGCHIDLLTCNAIVKLYVEAGEVEKADSFL 507
Query: 102 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS 144
V+ +K+ + P +Y + A ++ +K D+M S
Sbjct: 508 VKAVKKYGMKPLFTSYKTLMDHYARRGDVHNAEKIFDKMRQSS 550
>gi|22165078|gb|AAM93695.1| putative leaf protein [Oryza sativa Japonica Group]
Length = 372
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 141/300 (47%), Gaps = 31/300 (10%)
Query: 9 LSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFE 68
LS D A R++L+TKV+G+ YF+ +P K + Y +LL YA A EKAEELFE
Sbjct: 42 LSPGDVANRLELITKVYGLDRAVEYFDSMPDQLKQQQCYGSLLKCYAEANCVEKAEELFE 101
Query: 69 RVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYN---------- 118
+++ ++ ++ YN MM LY+ GQVE+V + + ++ +VPD+ T +
Sbjct: 102 KMRGMGMA-SSYAYNVMMRLYLQNGQVERVHSMHQAMEESGIVPDVSTTHTLVAVLRKKK 160
Query: 119 LWISSCAATLNIDQVKKFLDEM-SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA 177
+++ +I ++ L++ SC+S Y+ + + + + +V AE +
Sbjct: 161 TLVAAYVVAEDIKAIENVLEKANSCNS-------MYMCRIGVLLKMNDMVGAEKAYEEWE 213
Query: 178 EKSITQRQWITYDFLIILYAGLGNKDK----IDQIWKSLRMTKQKMTSRNYICILSSYLM 233
K + + + L+ Y G DK +DQ K RM + + Y
Sbjct: 214 SKHVYHDSRLI-NLLVDAYCKEGLMDKAEALVDQFIKKGRMPFANTCYK----LAGGYFK 268
Query: 234 LGHLKEVGEIIDQWKQSATSDFDISACNRL--LGAFSDVGLTEKANEFHMLLLQKNCAPT 291
+G + + ++ + SA++++ N L L F++ E A E M LLQ+ PT
Sbjct: 269 VGQVSKAADLTKKALASASNEWIPDLTNVLMSLNYFAEQKNVEAAEEM-MSLLQRLVTPT 327
>gi|225441211|ref|XP_002266581.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Vitis vinifera]
Length = 587
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 123/243 (50%), Gaps = 11/243 (4%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M HK+ + + DYA+R+DL+ KV G+ E Y E +P S + Y LL
Sbjct: 177 MEEHKKLDMVERDYASRVDLIAKVRGLQKAEHYIEKIPKSFRGELVYRTLLANCVSTTNA 236
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
+KAEE+F ++K N+++ LY V + +K+A V+ +++++V P +FTY L
Sbjct: 237 KKAEEVFNKMKDLGFPITTFACNQLLLLYKRVDK-KKIADVLLLMEKEDVKPSLFTYGLL 295
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAE-K 179
I + + +I +++ ++ M + + V+ + LV Y+ AE + L E E
Sbjct: 296 IDTKGQSNDITGMEQIVETMKAEGIEPNLQVQSI-LVRHYVFGGLKEKAE-AILKEMEGG 353
Query: 180 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 239
++ + +W+ L+ YA LG D +++IWK + + ++ + +Y G LK+
Sbjct: 354 NLKENRWVCR-VLLPPYAALGKADDVERIWK---VCESNPRLPEFVAAIEAY---GKLKK 406
Query: 240 VGE 242
V E
Sbjct: 407 VEE 409
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 74/155 (47%), Gaps = 4/155 (2%)
Query: 12 SDYATRIDLMTKVFGIHSGERYFEGLPLSAK--TSETYTALLHLYAGAKWTEKAEELFER 69
++ I+ K+ + E F + + K +S+ Y+ALL +YA K K ++L ++
Sbjct: 392 PEFVAAIEAYGKLKKVEEAEAIFNKMSKTFKRLSSKHYSALLKVYADHKMLIKGKDLVKQ 451
Query: 70 VKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIF-TYNLWISSCAATL 128
+ S L ++ ++ LY+ G+VEK ++++ +++ + +F TY + A
Sbjct: 452 MSDSGCRIGPLTWDALVKLYVEAGEVEKADKILQKAMQQSPIKPMFSTYMAIMDQYAKRG 511
Query: 129 NIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
+I +K +M SG ++ L+ Y+ A
Sbjct: 512 DIHNSEKMFHQMR-QSGYVSRLRQFQCLIQAYVNA 545
>gi|78708864|gb|ABB47839.1| expressed protein [Oryza sativa Japonica Group]
gi|215701127|dbj|BAG92551.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 341
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 141/300 (47%), Gaps = 31/300 (10%)
Query: 9 LSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFE 68
LS D A R++L+TKV+G+ YF+ +P K + Y +LL YA A EKAEELFE
Sbjct: 11 LSPGDVANRLELITKVYGLDRAVEYFDSMPDQLKQQQCYGSLLKCYAEANCVEKAEELFE 70
Query: 69 RVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYN---------- 118
+++ ++ ++ YN MM LY+ GQVE+V + + ++ +VPD+ T +
Sbjct: 71 KMRGMGMA-SSYAYNVMMRLYLQNGQVERVHSMHQAMEESGIVPDVSTTHTLVAVLRKKK 129
Query: 119 LWISSCAATLNIDQVKKFLDEM-SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA 177
+++ +I ++ L++ SC+S Y+ + + + + +V AE +
Sbjct: 130 TLVAAYVVAEDIKAIENVLEKANSCNS-------MYMCRIGVLLKMNDMVGAEKAYEEWE 182
Query: 178 EKSITQRQWITYDFLIILYAGLGNKDK----IDQIWKSLRMTKQKMTSRNYICILSSYLM 233
K + + + L+ Y G DK +DQ K RM + + Y
Sbjct: 183 SKHVYHDSRLI-NLLVDAYCKEGLMDKAEALVDQFIKKGRMPFANTCYK----LAGGYFK 237
Query: 234 LGHLKEVGEIIDQWKQSATSDFDISACNRL--LGAFSDVGLTEKANEFHMLLLQKNCAPT 291
+G + + ++ + SA++++ N L L F++ E A E M LLQ+ PT
Sbjct: 238 VGQVSKAADLTKKALASASNEWIPDLTNVLMSLNYFAEQKNVEAAEEM-MSLLQRLVTPT 296
>gi|297739953|emb|CBI30135.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 123/243 (50%), Gaps = 11/243 (4%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M HK+ + + DYA+R+DL+ KV G+ E Y E +P S + Y LL
Sbjct: 214 MEEHKKLDMVERDYASRVDLIAKVRGLQKAEHYIEKIPKSFRGELVYRTLLANCVSTTNA 273
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
+KAEE+F ++K N+++ LY V + +K+A V+ +++++V P +FTY L
Sbjct: 274 KKAEEVFNKMKDLGFPITTFACNQLLLLYKRVDK-KKIADVLLLMEKEDVKPSLFTYGLL 332
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAE-K 179
I + + +I +++ ++ M + + V+ + LV Y+ AE + L E E
Sbjct: 333 IDTKGQSNDITGMEQIVETMKAEGIEPNLQVQSI-LVRHYVFGGLKEKAE-AILKEMEGG 390
Query: 180 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 239
++ + +W+ L+ YA LG D +++IWK + + ++ + +Y G LK+
Sbjct: 391 NLKENRWVCR-VLLPPYAALGKADDVERIWK---VCESNPRLPEFVAAIEAY---GKLKK 443
Query: 240 VGE 242
V E
Sbjct: 444 VEE 446
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 74/155 (47%), Gaps = 4/155 (2%)
Query: 12 SDYATRIDLMTKVFGIHSGERYFEGLPLSAK--TSETYTALLHLYAGAKWTEKAEELFER 69
++ I+ K+ + E F + + K +S+ Y+ALL +YA K K ++L ++
Sbjct: 429 PEFVAAIEAYGKLKKVEEAEAIFNKMSKTFKRLSSKHYSALLKVYADHKMLIKGKDLVKQ 488
Query: 70 VKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIF-TYNLWISSCAATL 128
+ S L ++ ++ LY+ G+VEK ++++ +++ + +F TY + A
Sbjct: 489 MSDSGCRIGPLTWDALVKLYVEAGEVEKADKILQKAMQQSPIKPMFSTYMAIMDQYAKRG 548
Query: 129 NIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
+I +K +M SG ++ L+ Y+ A
Sbjct: 549 DIHNSEKMFHQMR-QSGYVSRLRQFQCLIQAYVNA 582
>gi|125575301|gb|EAZ16585.1| hypothetical protein OsJ_32057 [Oryza sativa Japonica Group]
Length = 400
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 141/300 (47%), Gaps = 31/300 (10%)
Query: 9 LSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFE 68
LS D A R++L+TKV+G+ YF+ +P K + Y +LL YA A EKAEELFE
Sbjct: 70 LSPGDVANRLELITKVYGLDRAVEYFDSMPDQLKQQQCYGSLLKCYAEANCVEKAEELFE 129
Query: 69 RVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYN---------- 118
+++ ++ ++ YN MM LY+ GQVE+V + + ++ +VPD+ T +
Sbjct: 130 KMRGMGMA-SSYAYNVMMRLYLQNGQVERVHSMHQAMEESGIVPDVSTTHTLVAVLRKKK 188
Query: 119 LWISSCAATLNIDQVKKFLDEM-SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA 177
+++ +I ++ L++ SC+S Y+ + + + + +V AE +
Sbjct: 189 TLVAAYVVAEDIKAIENVLEKANSCNS-------MYMCRIGVLLKMNDMVGAEKAYEEWE 241
Query: 178 EKSITQRQWITYDFLIILYAGLGNKDK----IDQIWKSLRMTKQKMTSRNYICILSSYLM 233
K + + + L+ Y G DK +DQ K RM + + Y
Sbjct: 242 SKHVYHDSRLI-NLLVDAYCKEGLMDKAEALVDQFIKKGRMPFANTCYK----LAGGYFK 296
Query: 234 LGHLKEVGEIIDQWKQSATSDFDISACNRL--LGAFSDVGLTEKANEFHMLLLQKNCAPT 291
+G + + ++ + SA++++ N L L F++ E A E M LLQ+ PT
Sbjct: 297 VGQVSKAADLTKKALASASNEWIPDLTNVLMSLNYFAEQKNVEAAEEM-MSLLQRLVTPT 355
>gi|115482780|ref|NP_001064983.1| Os10g0501000 [Oryza sativa Japonica Group]
gi|113639592|dbj|BAF26897.1| Os10g0501000, partial [Oryza sativa Japonica Group]
Length = 451
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 141/301 (46%), Gaps = 31/301 (10%)
Query: 9 LSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFE 68
LS D A R++L+TKV+G+ YF+ +P K + Y +LL YA A EKAEELFE
Sbjct: 121 LSPGDVANRLELITKVYGLDRAVEYFDSMPDQLKQQQCYGSLLKCYAEANCVEKAEELFE 180
Query: 69 RVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYN---------- 118
+++ ++ ++ YN MM LY+ GQVE+V + + ++ +VPD+ T +
Sbjct: 181 KMRGMGMA-SSYAYNVMMRLYLQNGQVERVHSMHQAMEESGIVPDVSTTHTLVAVLRKKK 239
Query: 119 LWISSCAATLNIDQVKKFLDEM-SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA 177
+++ +I ++ L++ SC+S Y+ + + + + +V AE +
Sbjct: 240 TLVAAYVVAEDIKAIENVLEKANSCNS-------MYMCRIGVLLKMNDMVGAEKAYEEWE 292
Query: 178 EKSITQRQWITYDFLIILYAGLGNKDK----IDQIWKSLRMTKQKMTSRNYICILSSYLM 233
K + + + L+ Y G DK +DQ K RM + + Y
Sbjct: 293 SKHVYHDSRLI-NLLVDAYCKEGLMDKAEALVDQFIKKGRMPFANTCYK----LAGGYFK 347
Query: 234 LGHLKEVGEIIDQWKQSATSDFDISACNRL--LGAFSDVGLTEKANEFHMLLLQKNCAPT 291
+G + + ++ + SA++++ N L L F++ E A E M LLQ+ PT
Sbjct: 348 VGQVSKAADLTKKALASASNEWIPDLTNVLMSLNYFAEQKNVEAAEEM-MSLLQRLVTPT 406
Query: 292 N 292
Sbjct: 407 R 407
>gi|449457725|ref|XP_004146598.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 227
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 83/140 (59%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M + F LS +D A R++L+ +V G+ E YF+ +P K + + ALL+ YA K
Sbjct: 87 MSDKRYFPLSTADIAIRMNLILRVHGLEQVEDYFDNMPSQLKRYQVHIALLNCYAHEKCV 146
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
+KA +++K+ + + L YN MM LY +G+ E++ +++E+K + V D FTY++
Sbjct: 147 DKANAFMQKIKEMGFANSPLPYNIMMNLYHQIGEFERLDSLLKEMKERGVYYDRFTYSIR 206
Query: 121 ISSCAATLNIDQVKKFLDEM 140
IS+ AA + ++K +++M
Sbjct: 207 ISAYAAASDFRGIEKIMEQM 226
>gi|356557435|ref|XP_003547021.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Glycine max]
Length = 507
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/290 (20%), Positives = 138/290 (47%), Gaps = 4/290 (1%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
++ + + + DY+ ++ TK+ GI GE+ F +P+ ++ Y L+
Sbjct: 96 VIRERPYRPRELDYSYLVEFTTKLHGISHGEKLFSRIPVEFQSELLYNNLVIACLDKGVI 155
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
+ + E +++++ + L++N ++ L+ S G+ + + ++ ++K V P + TYN+
Sbjct: 156 KLSLEYMKKMRELGFPISHLVFNRLIILHSSPGRRKMIPKLLTQMKADKVTPHVSTYNIL 215
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
+ A N++ + K M ++ + Y ++ I + L A + + EKS
Sbjct: 216 MKIEANEHNLENLVKVFGRMKVAQVEPNE-ISYC-ILAIAHAVARLYTATEAYVEAVEKS 273
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 240
IT W T D L++LY LGN+ +++++W +++ + S++Y+ + ++ +G L
Sbjct: 274 ITGNNWSTLDVLLMLYGYLGNQKELERVWATIQELPS-IRSKSYMLAIEAFGRIGQLNRA 332
Query: 241 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
EI + K S + N ++ + G ++A + + + C P
Sbjct: 333 EEIWLEMK-STKGLKSVEQFNSMMSVYCKHGFIDRAAKLYKNMKASGCKP 381
>gi|302143279|emb|CBI21840.3| unnamed protein product [Vitis vinifera]
Length = 446
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 92/158 (58%), Gaps = 3/158 (1%)
Query: 7 FVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEEL 66
F +S D A ++DL++KV G+ E+YF P S ++ + Y ALL+ Y+ K EKAE +
Sbjct: 99 FDISPGDVAIQLDLISKVHGLEQAEKYFNETPNSLRSFQVYGALLNCYSQKKSLEKAEAI 158
Query: 67 FERVKQSNLSF-NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCA 125
+ ++ ++ F L YN M+ LY +G+ EK+ +++E++ + D FTY + +++
Sbjct: 159 MQEMR--DMGFVKTLSYNVMLGLYSRLGKHEKLDNLMQEMEENGIGLDSFTYCIRLNAYC 216
Query: 126 ATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
AT +++ ++K L ++ D + DW Y+ N Y+ A
Sbjct: 217 ATSDMEGMEKLLMKLETDPAVNSDWNAYIVAANGYLKA 254
>gi|297842839|ref|XP_002889301.1| hypothetical protein ARALYDRAFT_477224 [Arabidopsis lyrata subsp.
lyrata]
gi|297335142|gb|EFH65560.1| hypothetical protein ARALYDRAFT_477224 [Arabidopsis lyrata subsp.
lyrata]
Length = 597
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 107/208 (51%), Gaps = 3/208 (1%)
Query: 3 THKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEK 62
+K+ +++ DY++R+DL K+ G+ +GE Y + +P S K Y LL A +K
Sbjct: 189 ANKKIEMNERDYSSRLDLTVKIRGLENGEAYMQKIPKSFKGEVIYRTLLANCVAAGNVKK 248
Query: 63 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 122
+E +F R+K + ++M+ LY + + +K+A V+ ++++NV P + TY + I
Sbjct: 249 SELVFNRMKDLGFPLSGFTCDQMLLLYKRIDR-KKIADVLLLMEKENVKPSLLTYKILID 307
Query: 123 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT 182
AT +I +++ L+ M D G D+ + L + + + L L E E
Sbjct: 308 VKGATNDISGMEQILETMK-DEGVQPDF-QTQALTAKHYSGAGLKEKAEKVLKEMEGESL 365
Query: 183 QRQWITYDFLIILYAGLGNKDKIDQIWK 210
+ + L+ +YA LG +D++ +IWK
Sbjct: 366 EANRRAFKDLLSIYASLGREDEVTRIWK 393
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 23 KVFGIHSGERYFEGLPLSAK--TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 80
K+ + E FE + + +S TY+ LL +Y K K ++L +R+ +S A
Sbjct: 413 KLNKVQEAEAIFEKIVTMGRRASSNTYSVLLRVYVDHKMLSKGKDLVKRMAESGCRIEAT 472
Query: 81 MYNEMMTLYMSVGQVEKV 98
++ ++ LY+ G+VEK
Sbjct: 473 TWDALIKLYVEAGEVEKA 490
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 95/239 (39%), Gaps = 42/239 (17%)
Query: 54 YAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPD 113
Y+GA EKAE++ + ++ +L N + +++++Y S+G+ ++V + + + K
Sbjct: 344 YSGAGLKEKAEKVLKEMEGESLEANRRAFKDLLSIYASLGREDEVTRIWKICESK----P 399
Query: 114 IFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVN----- 168
F +L LN Q + + E G Y L+ +Y+ L
Sbjct: 400 YFDESLAAIHAFGKLNKVQEAEAIFEKIVTMGRRASSNTYSVLLRVYVDHKMLSKGKDLV 459
Query: 169 ---AESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIW-KSLRMTKQKMTSRNY 224
AES +EA T+D LI LY G +K D + K+ + + K+ ++
Sbjct: 460 KRMAESGCRIEA---------TTWDALIKLYVEAGEVEKADSMLDKASKQSHTKLMMNSF 510
Query: 225 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 283
+ I+ Y G D+ ++ +VG T + +F LL
Sbjct: 511 MYIMDEYSKRG--------------------DVHNTEKIFLKMREVGYTSRLRQFQALL 549
>gi|449437992|ref|XP_004136774.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 604
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 132/280 (47%), Gaps = 15/280 (5%)
Query: 13 DYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQ 72
DYA+R+DL+ KV G+ E Y +P S + + LL Y A +KAEE+F ++K
Sbjct: 206 DYASRLDLIAKVQGLPKAESYIAKIPQSFQGEVIHRTLLANYVAANNVKKAEEVFNKMKD 265
Query: 73 SNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQ 132
+++M+ LY + + K+A ++ ++++NV P FTY + I + +I
Sbjct: 266 LEFPMTPFAHDQMLILYKRIDK-RKLADILSLMEKENVKPSPFTYKILIDAKGLCNDISG 324
Query: 133 VKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFL 192
+++ +D M + D V ++L+ + ++ L + L + E++ ++ + L
Sbjct: 325 MEQVVDSMKAEGIKPD--VSTLSLLAKHYVSNGLKDKAKVILKDMEENNSKGSRLPCRIL 382
Query: 193 IILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ----WK 248
+ LY L +D++ ++WK S + + ++ L +++E +I D+ WK
Sbjct: 383 LPLYGALQMEDEVRRLWKICEANPHMEES---MAAIVAWGKLKNVQEAEKIFDRFVKTWK 439
Query: 249 QSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 288
+ +T + N ++ + + K E + + C
Sbjct: 440 KPSTRHY-----NTMMNVYGGSKMLTKGKELVNQMAESGC 474
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 58/116 (50%), Gaps = 3/116 (2%)
Query: 23 KVFGIHSGERYFEGLPLSAKTSET--YTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 80
K+ + E+ F+ + K T Y ++++Y G+K K +EL ++ +S + L
Sbjct: 420 KLKNVQEAEKIFDRFVKTWKKPSTRHYNTMMNVYGGSKMLTKGKELVNQMAESGCRMDEL 479
Query: 81 MYNEMMTLYMSVGQVEKV-ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKK 135
++ ++ LY+ G+VEK + +V+ + + P TY + A+ ++ V+K
Sbjct: 480 TWDAVVKLYVEAGEVEKADSFLVKAVLQNKKKPMFTTYITLMDRYASRGDVPNVEK 535
>gi|357119107|ref|XP_003561287.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Brachypodium distachyon]
Length = 576
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 128/271 (47%), Gaps = 8/271 (2%)
Query: 9 LSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFE 68
+ DYA +DL+ + GI +Y + +P + Y LL A+ +KAEE+F
Sbjct: 174 FEERDYACHLDLIARNTGIEDARKYIDRVPKPFRNEVLYETLLVNCVRARDIQKAEEVFR 233
Query: 69 RVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATL 128
++ +L N+M+ LY V + KVA ++ ++++N+ P FTY L I +
Sbjct: 234 EIRDLSLPLTVSACNQMILLYKRVART-KVADIIMLMEKENIKPSPFTYKLIIDLKGRSN 292
Query: 129 NIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWIT 188
+I V+ L+EM +G D+V + YI+ L+ + + E E + +
Sbjct: 293 DISGVEVTLNEMKA-AGVEPDFVTQTMVAKFYISGG-LIEKAKAVVSEIEMEYMKDKRHA 350
Query: 189 YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK 248
L+ LYA L D++ +IWK T+ K+ +++ + ++ LG +++ E +
Sbjct: 351 VRSLLHLYAALSKPDEVARIWKLC--TEPKLD--DFMAAIEAWGKLGCIEQAEETFEAML 406
Query: 249 QSATSDFDISACNRLLGAFSDVGLTEKANEF 279
+ AT N +L +++ L +K +F
Sbjct: 407 E-ATQKLSSKYYNGMLNVYAENKLMDKGKKF 436
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 60/117 (51%), Gaps = 2/117 (1%)
Query: 117 YNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVE 176
YN ++ A +D+ KKF++ MS D G + + + LV +Y+ + + A+S
Sbjct: 417 YNGMLNVYAENKLMDKGKKFVERMSFD-GCPNGPLTWDALVKLYVNSGEVAKADSFLQNA 475
Query: 177 AEKSITQRQ-WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYL 232
E++ +R + +Y +L++ YA +G+ ++++ L+ + Y +L +Y+
Sbjct: 476 TEQNPDRRPTYGSYIYLLMAYAKMGDIYNAEKMFDRLKNIRYPGRKPPYPVLLEAYV 532
>gi|449506017|ref|XP_004162629.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 608
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 133/284 (46%), Gaps = 15/284 (5%)
Query: 9 LSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFE 68
+ DYA+R+DL+ KV G+ E Y +P S + + LL Y A +KAEE+F
Sbjct: 206 FNQRDYASRLDLIAKVQGLPKAESYIAKIPQSFQGEVIHRTLLANYVAANNVKKAEEVFN 265
Query: 69 RVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATL 128
++K +++M+ LY + + K+A ++ ++++NV P FTY + I +
Sbjct: 266 KMKDLEFPMTPFAHDQMLILYKRIDK-RKLADILSLMEKENVKPSPFTYKILIDAKGLCN 324
Query: 129 NIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWIT 188
+I +++ +D M + D V ++L+ + ++ L + L + E++ ++ +
Sbjct: 325 DISGMEQVVDSMKAEGIKPD--VSTLSLLAKHYVSNGLKDKAKVILKDMEENNSKGSRLP 382
Query: 189 YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ-- 246
L+ LY L +D++ ++WK S + + ++ L +++E +I D+
Sbjct: 383 CRILLPLYGALQMEDEVRRLWKICEANPHMEES---MAAIVAWGKLKNVQEAEKIFDRFV 439
Query: 247 --WKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 288
WK+ +T + N ++ + + K E + + C
Sbjct: 440 KTWKKPSTRHY-----NTMMNVYGGSKMLTKGKELVNQMAESGC 478
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 70/144 (48%), Gaps = 4/144 (2%)
Query: 23 KVFGIHSGERYFEGLPLSAKTSET--YTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 80
K+ + E+ F+ + K T Y ++++Y G+K K +EL ++ +S + L
Sbjct: 424 KLKNVQEAEKIFDRFVKTWKKPSTRHYNTMMNVYGGSKMLTKGKELVNQMAESGCRMDEL 483
Query: 81 MYNEMMTLYMSVGQVEKV-ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE 139
++ ++ LY+ G+VEK + +V+ +++ + P +Y + A ++ +K D+
Sbjct: 484 TWDAVVKLYVEAGEVEKADSFLVKAVQKYGMKPLFTSYKTLMDHYARRGDVHNAEKIFDK 543
Query: 140 MSCDSGGSDDWVKYVNLVNIYITA 163
M SG ++ L+ Y+ +
Sbjct: 544 M-IQSGFVPRLGQFGTLLQAYVNS 566
>gi|125532538|gb|EAY79103.1| hypothetical protein OsI_34209 [Oryza sativa Indica Group]
Length = 479
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 139/301 (46%), Gaps = 31/301 (10%)
Query: 9 LSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFE 68
LS D A R++L+TKV G+ YF+ +P K + Y +LL YA A EKAEELFE
Sbjct: 149 LSPGDVANRLELITKVHGLDRAVEYFDSMPDQLKQQQCYGSLLKCYAEANCVEKAEELFE 208
Query: 69 RVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYN---------- 118
+++ ++ ++ YN MM LY+ GQVE+V + + ++ +VPD+ T +
Sbjct: 209 KMRGMGMA-SSYAYNVMMRLYLQNGQVERVHSMHQAMEESGIVPDVSTTHTLVAVLRKKK 267
Query: 119 LWISSCAATLNIDQVKKFLDEM-SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA 177
+++ +I ++ L++ SC+S Y+ + + + + +V AE +
Sbjct: 268 TLVAAYVVAEDIKAIENVLEKANSCNS-------MYMCRIGVLLKMNDMVGAEKAYEEWE 320
Query: 178 EKSITQRQWITYDFLIILYAGLGNKDK----IDQIWKSLRMTKQKMTSRNYICILSSYLM 233
K + + + L+ Y G DK +DQ K RM + + Y
Sbjct: 321 SKHVYHDSRLI-NLLVDAYCKEGLMDKAEALVDQFIKKGRMPFANTCYK----LAGGYFK 375
Query: 234 LGHLKEVGEIIDQWKQSATSDFDISACNRL--LGAFSDVGLTEKANEFHMLLLQKNCAPT 291
+G + + ++ + SA++++ N L L F++ E A E LLQ+ PT
Sbjct: 376 VGQVSKAADLTKKALASASNEWIPDLTNVLMSLNYFAEQKNVEAAEEMAS-LLQRLITPT 434
Query: 292 N 292
Sbjct: 435 R 435
>gi|356503391|ref|XP_003520493.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g80270, mitochondrial-like [Glycine max]
Length = 580
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 131/275 (47%), Gaps = 24/275 (8%)
Query: 3 THKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEK 62
+ KEF + DYA+R+DL+ K+ G+H E Y E +P S Y LL +K
Sbjct: 173 SKKEFEFIERDYASRLDLIAKLRGLHKAEVYIETIPESCSREIMYRTLLANCVSQNNVKK 232
Query: 63 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 122
AEE+F ++K +L NE++ LY + +K+A ++ ++ + + P +Y++ I
Sbjct: 233 AEEVFSKMKDLDLPITVFTCNELLFLYKRNDK-KKIADLLLLMENEKIKPSRHSYSILID 291
Query: 123 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAE-KSI 181
+ + +I + + +D M G D L YI+A L + + L + E +++
Sbjct: 292 TKGQSKDIGGMDQIVDRMKA-QGIEPDINTQAVLARHYISAG-LQDKVETLLKQMEGENL 349
Query: 182 TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVG 241
Q +W+ L+ LYA LG D++ +IWK T+ Y L + G L ++
Sbjct: 350 KQNRWLCR-ILLPLYANLGKVDEVGRIWKVCE------TNPRYDECLGAIEAWGKLNKID 402
Query: 242 E-------IIDQWKQSATSDFDISACNRLLGAFSD 269
E ++ +WK S+ + C+ LL +++
Sbjct: 403 EAEKVFEMMVKKWKLSSKT------CSILLKVYAN 431
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 55/105 (52%), Gaps = 1/105 (0%)
Query: 18 IDLMTKVFGIHSGERYFEGLPLSAK-TSETYTALLHLYAGAKWTEKAEELFERVKQSNLS 76
I+ K+ I E+ FE + K +S+T + LL +YA + K ++L +R+
Sbjct: 392 IEAWGKLNKIDEAEKVFEMMVKKWKLSSKTCSILLKVYANNEMLMKGKDLMKRIGDGGCR 451
Query: 77 FNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 121
L ++ ++ LY+ G+VEK V+++ +++ + +F+ L I
Sbjct: 452 IGPLTWDTIVKLYVQTGEVEKADSVLQKAAQQSQMKPMFSTYLTI 496
>gi|449437710|ref|XP_004136634.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
gi|449506005|ref|XP_004162626.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 606
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 141/312 (45%), Gaps = 38/312 (12%)
Query: 9 LSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFE 68
+++DYA+R+DL+ KV G+H E Y +P S + Y LL Y A KAEE+F
Sbjct: 202 FNENDYASRLDLIAKVQGLHKAESYIAKIPKSFQGEVMYRTLLANYVAANNVNKAEEVFN 261
Query: 69 RVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATL 128
++K YN+++ LY + K+A V+ ++++NV P FTY + I + +
Sbjct: 262 KMKDLEFPMTTFAYNQVLVLYKRNDR-RKIADVLLLMEKENVKPSPFTYKILIDAKGLSK 320
Query: 129 NIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWIT 188
+I +++ +D M + G D L Y++ L + +TL E E+ ++
Sbjct: 321 DISGMEQVVDTMKAE-GIELDVFALCLLAKHYVSCG-LKDKAKATLKEMEEINSKGSRWP 378
Query: 189 YDFLIILYAGLGNKDKIDQIWKSLRM---------------------------------- 214
L+ LY L +D++ ++W+
Sbjct: 379 CRLLLPLYGELEMEDEVRRLWEICEANPHIEECMAAIVAWGKLKNIHEAEKIFDKVVKTW 438
Query: 215 TKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTE 274
K+K+++++Y ++ Y L + E+++Q +S S D A + ++ + + G E
Sbjct: 439 PKKKISTKHYCTMIKVYGDCKMLTKGKELVNQMAESGYS-IDPLAWDAVVKLYVEAGEVE 497
Query: 275 KANEFHMLLLQK 286
KA+ F + ++K
Sbjct: 498 KADTFLVKAVKK 509
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 70/147 (47%), Gaps = 8/147 (5%)
Query: 23 KVFGIHSGERYFEGL----PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFN 78
K+ IH E+ F+ + P +++ Y ++ +Y K K +EL ++ +S S +
Sbjct: 420 KLKNIHEAEKIFDKVVKTWPKKKISTKHYCTMIKVYGDCKMLTKGKELVNQMAESGYSID 479
Query: 79 ALMYNEMMTLYMSVGQVEKV-ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFL 137
L ++ ++ LY+ G+VEK +V+ +K+ + P +Y ++ A ++ +K
Sbjct: 480 PLAWDAVVKLYVEAGEVEKADTFLVKAVKKYEMRPLYCSYRTLMNHYARRGDVHNAEKIF 539
Query: 138 DEMSCDSGGSDDWV-KYVNLVNIYITA 163
+M G W ++ L+ Y+ +
Sbjct: 540 YKMR--QSGYGPWFNQFETLIQAYVNS 564
>gi|147766620|emb|CAN73943.1| hypothetical protein VITISV_032243 [Vitis vinifera]
Length = 448
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 131/278 (47%), Gaps = 20/278 (7%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M + F L+ SD A R+DL++ V P + + Y ALL Y K
Sbjct: 80 MTDRRYFTLTPSDAAIRLDLISMV-------------PWTXAGXDAYGALLSGYVREKSV 126
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFT-YNL 119
EKAE +++++ + + ++ YN ++ LY G K+ +++E++ K + D FT NL
Sbjct: 127 EKAEATMQKMREMDFATSSFPYNMLINLYSQTGNHGKIEALIQEMQXKAIPCDAFTVXNL 186
Query: 120 WISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA-ESSTLVEAE 178
++ AA+ +I ++K L+ M D S DW Y + Y+ + A E +E+
Sbjct: 187 MVAYVAAS-DISAMEKXLNRMEEDPHISVDWNIYSVAASGYLKVGLIDKALEMLKKIESN 245
Query: 179 KSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLK 238
+ +R + L+ LYA +K ++ ++W + + + Y C+++ L ++
Sbjct: 246 RPHLERX-SAFKXLLSLYARTXHKQELYRVWNLYKPSYE--YPEAYSCMITCLTKLDDIE 302
Query: 239 EVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
+I +W+ T +D NRLL A+ L +KA
Sbjct: 303 GAEKIFQEWECECTM-YDFRVLNRLLSAYCKRCLFDKA 339
>gi|297844450|ref|XP_002890106.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297335948|gb|EFH66365.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 594
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 104/207 (50%), Gaps = 3/207 (1%)
Query: 4 HKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKA 63
+K+F + + DYA+R+DL++KV G++ GE Y E +P S + Y LL Y A
Sbjct: 187 NKQFEMKERDYASRLDLISKVRGLYKGEAYIETIPESFRGELVYRTLLSNYVATSNVRTA 246
Query: 64 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 123
E +F ++K + N+M+ LY V + +K+A V+ ++++N+ P++ TY + I +
Sbjct: 247 EAVFNKMKDLGFPLSTFTCNQMLILYKRVDK-KKIADVLLLMEKENLKPNLNTYKILIDT 305
Query: 124 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQ 183
+ +I +++ ++ M + G D + Y +A AE L E E +
Sbjct: 306 KGLSNDITGMEQIVETMKSE-GVEPDLRARALIARNYASAGLKEKAE-KVLKEMEGESLE 363
Query: 184 RQWITYDFLIILYAGLGNKDKIDQIWK 210
Y L+ +Y L D++ +IWK
Sbjct: 364 ENRHVYKDLLSVYGFLQRADEVTRIWK 390
Score = 37.4 bits (85), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 66/144 (45%), Gaps = 4/144 (2%)
Query: 23 KVFGIHSGERYFEG-LPLSAK-TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 80
K+ + E FE L +S + +S Y+ LL +Y K + ++L +++ S + AL
Sbjct: 410 KIDKVKEAEAVFEKMLKMSHRVSSNVYSVLLRVYVDHKMVSEGKDLVKQMLDSGCNIGAL 469
Query: 81 MYNEMMTLYMSVGQVEKV-ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE 139
+ ++ LY+ G+VEK + + + I+ K + P + ++ + ++ +K
Sbjct: 470 TLDAVIKLYLEAGEVEKAESSLSKAIQSKQIKPLMSSFMYVMGEYVRRGDVHNTEKIFQR 529
Query: 140 MSCDSGGSDDWVKYVNLVNIYITA 163
M G + Y L+ Y+ A
Sbjct: 530 MK-QFGYQSRFRTYQALIQAYVNA 552
>gi|224137686|ref|XP_002322619.1| predicted protein [Populus trichocarpa]
gi|222867249|gb|EEF04380.1| predicted protein [Populus trichocarpa]
Length = 472
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 103/201 (51%), Gaps = 5/201 (2%)
Query: 11 DSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERV 70
+ DYA+R+DL+ KV G+ E Y E +P S K Y LL A +KA E+F ++
Sbjct: 72 ERDYASRLDLIAKVRGLQKAEVYIEKIPKSLKGEVIYRTLLANCVSANNAKKAVEVFNKM 131
Query: 71 KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 130
K L YN+++ LY + +K+A V+ ++++NV P +FTY L I + + +I
Sbjct: 132 KDLELPITLFSYNQLLLLYKRHDK-KKIADVLLSMEKENVKPSLFTYILLIDTKGQSNDI 190
Query: 131 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAE-KSITQRQWITY 189
+++ + M + G + +K ++ + + L L E E ++ + +W
Sbjct: 191 AGMEQIAETMKAE--GIEPDIKTQAIMARHYVSGGLKEKAEIVLKEMEGGNLEEHRWAC- 247
Query: 190 DFLIILYAGLGNKDKIDQIWK 210
F++ LY LG D++ ++WK
Sbjct: 248 QFMLPLYGTLGKADEVSRLWK 268
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 68/140 (48%), Gaps = 4/140 (2%)
Query: 27 IHSGERYFEGLPLSAK--TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNE 84
I E FE + + K +S+ Y+ALL +YA K K ++L +++ S L ++
Sbjct: 292 IPEAEAVFELMSKTWKKLSSKHYSALLKVYANNKMLSKGKDLIKQMGDSGCRIGPLTWDA 351
Query: 85 MMTLYMSVGQVEKVALVVEEIKRKNVVPDIF-TYNLWISSCAATLNIDQVKKFLDEMSCD 143
++ LY+ G+VEK ++ + ++N + +F +Y + + A +I +K M
Sbjct: 352 LIKLYVEAGEVEKADSILNKAVQQNQMKPMFSSYMIIMEKYAKKGDIHNAEKMFHRMR-Q 410
Query: 144 SGGSDDWVKYVNLVNIYITA 163
+G ++ L+ YI A
Sbjct: 411 AGYQARSKQFQTLIQAYINA 430
>gi|449474117|ref|XP_004154078.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like, partial [Cucumis sativus]
Length = 263
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 101/202 (50%), Gaps = 3/202 (1%)
Query: 9 LSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFE 68
++ DYA+R+ L+ KV G+H E Y +P S + + ALL Y A EKAEE+F
Sbjct: 64 FNERDYASRVHLIAKVQGLHKAESYIAKIPKSFQGEVVHRALLANYVVANNVEKAEEVFN 123
Query: 69 RVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATL 128
++K + YN+M+ LY + + K+A V+ ++++N+ P FTY + I +
Sbjct: 124 KIKDLEFPMSIFAYNQMLVLYKKIDR-RKIADVLLLMEKENIKPCPFTYKILIDGKGLSN 182
Query: 129 NIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWIT 188
+I +++ +D M + G D L Y++ V A++ E + QW+
Sbjct: 183 DISGMEQVVDSMKAE-GIELDVSTLSLLAKHYVSCGLKVKAKAILKEIEETNSNGPQWLC 241
Query: 189 YDFLIILYAGLGNKDKIDQIWK 210
L+ Y L +D++ ++W+
Sbjct: 242 -RILLPFYGKLQMEDEVRRLWE 262
>gi|307136025|gb|ADN33879.1| DNA-binding protein [Cucumis melo subsp. melo]
Length = 608
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 140/290 (48%), Gaps = 27/290 (9%)
Query: 9 LSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFE 68
+++DYA+ +DL+ KV G+H E Y +P S + Y LL Y A +KAEE+F
Sbjct: 206 FNEADYASHLDLIAKVQGLHKAETYIAKIPNSFRGEAVYRTLLANYVLANDVKKAEEVFN 265
Query: 69 RVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATL 128
R+K Y++M+ LY + + ++A ++ ++++NV P FTY + I + +
Sbjct: 266 RMKDLEFPMTTFAYDQMLILYKRIDR-RRIADILSLMEKENVKPRPFTYKILIDAKGLSN 324
Query: 129 NIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLV----NAESSTLVEAEKSITQR 184
+I +++ +D M + +K +++ + + A H V ++ +++A + + +
Sbjct: 325 DISGMEQVVDTMKAEG------IK-LDVDTLLLLAKHYVLGGLKDKAMPILKATEEVNSK 377
Query: 185 --QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 242
+W +L+ LY L +D++ ++W+ + + + + ++ L +++E +
Sbjct: 378 GSRWPCR-YLLPLYGELQMEDEVRRLWE---ICEPNPNVEECMAAIVAWGKLKNIQEAEK 433
Query: 243 IIDQ----WKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 288
I D+ WK+ +T + ++ + D + K E + + C
Sbjct: 434 IFDRVVKTWKRLSTKHYST-----MIKVYGDSKMLTKGKELVNQMAKSGC 478
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/144 (20%), Positives = 73/144 (50%), Gaps = 4/144 (2%)
Query: 23 KVFGIHSGERYFEGLPLSAK--TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 80
K+ I E+ F+ + + K +++ Y+ ++ +Y +K K +EL ++ +S + +
Sbjct: 424 KLKNIQEAEKIFDRVVKTWKRLSTKHYSTMIKVYGDSKMLTKGKELVNQMAKSGCRIDPM 483
Query: 81 MYNEMMTLYMSVGQVEKV-ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE 139
+++ ++ LY+ G+VEK + + + +K+ + P +Y + A ++ +K +
Sbjct: 484 IWDAVVKLYVEAGEVEKADSFLFKAVKQYGMKPLFDSYRTLMVHYARKGDVHNSEKIFHK 543
Query: 140 MSCDSGGSDDWVKYVNLVNIYITA 163
+ SG + ++V LV Y+ A
Sbjct: 544 IR-QSGYPTHFGQFVTLVQAYLNA 566
>gi|224089975|ref|XP_002308888.1| predicted protein [Populus trichocarpa]
gi|222854864|gb|EEE92411.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 107/207 (51%), Gaps = 7/207 (3%)
Query: 5 KEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAE 64
+EFV + DYA+R+DL+ KV G+H E Y + +P S K Y LL +KAE
Sbjct: 151 QEFV--ERDYASRLDLIAKVRGLHKAEVYIDKIPKSFKGEVIYRTLLANCVVDHNVKKAE 208
Query: 65 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 124
E+F +++ N+++ LY + + +K+A V+ ++++NV P +FTY + I +
Sbjct: 209 EVFNKMRDLEFPITPFACNQLLLLYKRLDK-KKIADVLLLMEKENVKPSLFTYKILIDTK 267
Query: 125 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAE-KSITQ 183
+ ++ + + ++ M + G D + Y++ AE + L E E ++ +
Sbjct: 268 GQSNDMTGMDQIVETMKAE-GIEPDIRTQAIMARHYVSGGLKEKAE-AILKEMEGGNLEE 325
Query: 184 RQWITYDFLIILYAGLGNKDKIDQIWK 210
+W F++ LY LG D++ ++WK
Sbjct: 326 HRWACR-FMLPLYGALGKADEVSRVWK 351
Score = 43.9 bits (102), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 59/122 (48%), Gaps = 2/122 (1%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 102
+S Y+ LL +YA K K ++L +R+ S L ++ ++ LY+ G+VEK ++
Sbjct: 393 SSRHYSTLLKVYANHKMLSKGKDLIKRMGDSGCRIGPLTWDALVKLYVEAGEVEKADSIL 452
Query: 103 EEIKRKNVVPDIFTYNLWISSCAATL-NIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 161
+ ++N + +++ L I AT +I +K M +G ++ L+ YI
Sbjct: 453 NKAVQQNKIKPMYSSFLIIMERYATKGDIHNAEKMFHRMR-QAGYQARIRQFQTLIQAYI 511
Query: 162 TA 163
A
Sbjct: 512 IA 513
>gi|302801578|ref|XP_002982545.1| hypothetical protein SELMODRAFT_421999 [Selaginella moellendorffii]
gi|300149644|gb|EFJ16298.1| hypothetical protein SELMODRAFT_421999 [Selaginella moellendorffii]
Length = 1138
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 131/278 (47%), Gaps = 11/278 (3%)
Query: 5 KEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAE 64
+ F L+ D R+DL ++ + ER FE L ++ Y ALL Y K +AE
Sbjct: 727 RPFTLTTKDNIFRMDLASRCGSVGKAERIFERLAPEHRSEVAYNALLLSYTKKKKRGRAE 786
Query: 65 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 124
LF+ +K + + N + ++Y +G +V ++ +E ++ V D+ YNL + +
Sbjct: 787 RLFKELKATGTISSCYSLNLLASMYRQLGLDAEVLMLAKEAQKLGVELDMCFYNLLLPAK 846
Query: 125 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVE-----AEK 179
+++V+K ++ + + + + NIY++A N + ++E E
Sbjct: 847 FRVQGLEEVEKLYATITSPRDRT-RFFTCLAMANIYVSAGR--NDKVLEMLELIDQGMEA 903
Query: 180 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 239
+Q Y+ LI +YA L + ++++ W+ L+ +Q T +Y CI+ ++ LGH+
Sbjct: 904 GTIVKQRRRYNVLISMYASLEDGARVERTWERLKQQRQPNTE-DYCCIIRAWGKLGHVVR 962
Query: 240 VGEIIDQWKQSATSDFDISAC-NRLLGAFSDVGLTEKA 276
E I Q ++ S N ++ +S G+ E+A
Sbjct: 963 -AETIFQVAEANEKSLKYSTVFNAMMFVYSVAGMREEA 999
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 133/290 (45%), Gaps = 22/290 (7%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M K+F D R+D+ + I ++ F+ L KT++ Y + +++ K
Sbjct: 136 MYYTKQFPQDLDDVILRMDMAVRAKKIRRAQKIFKKLQAWEKTTDAYNTMFLIFSQRKMI 195
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
A++ + + K++ L N + ++ + LY G KV + E+I+ + P + N
Sbjct: 196 LHADDFYYKFKEAKLKPNDITFSILACLYRRCGLHNKVVRLQEDIEAAGMKPCVCFLNNL 255
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA----ESSTLVE 176
+ S I ++ +++ GSD +K +L + A+ ++A ++ L+E
Sbjct: 256 MVSKYELHGISSAEEIFNQLV--PAGSD--LKRSHLSTYSMMAASYLSAGMHDKAQNLLE 311
Query: 177 A-EKSITQRQWI----TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSY 231
EK++ Q + TY LI +Y+ + N+D ++++WK + + + +++Y+ ++ S
Sbjct: 312 VIEKAMDQGSFPKLRRTYHILISMYSTMKNRDGMERVWKKI----EDLKAQDYVAMIES- 366
Query: 232 LMLGHLKEVGEIIDQWKQSATSDF--DISACNRLLGAFSDVGLTEKANEF 279
G EVG +K++ S LLG ++ G +KA +
Sbjct: 367 --CGRADEVGSAEKYFKEADRKGLLNQPSLFAALLGVYAGKGQADKAEKL 414
Score = 44.3 bits (103), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Query: 9 LSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSET--YTALLHLYAGAKWTEKAEEL 66
L DY I+ + + S E+YF+ ++ + ALL +YAG +KAE+L
Sbjct: 355 LKAQDYVAMIESCGRADEVGSAEKYFKEADRKGLLNQPSLFAALLGVYAGKGQADKAEKL 414
Query: 67 FERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
F+++K+ ++S +AL Y+ ++ ++ +++ ++E
Sbjct: 415 FKKMKEQDVSRDALCYHYIILANLNAKNIDRAVEILE 451
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 103/221 (46%), Gaps = 28/221 (12%)
Query: 63 AEELFERV-------KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKR---KNVVP 112
AEE+F ++ K+S+LS Y+ M Y+S G +K ++E I++ + P
Sbjct: 268 AEEIFNQLVPAGSDLKRSHLS----TYSMMAASYLSAGMHDKAQNLLEVIEKAMDQGSFP 323
Query: 113 DIF-TYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES 171
+ TY++ IS + N D +++ ++ D D YV ++ A + +AE
Sbjct: 324 KLRRTYHILISMYSTMKNRDGMERVWKKIE-DLKAQD----YVAMIESCGRADEVGSAEK 378
Query: 172 STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSY 231
EA++ Q + L+ +YAG G DK ++++K + K++ SR+ +C Y
Sbjct: 379 -YFKEADRKGLLNQPSLFAALLGVYAGKGQADKAEKLFKKM---KEQDVSRDALCY--HY 432
Query: 232 LMLGHL--KEVGEIIDQWKQSATSDFDISACNRLLGAFSDV 270
++L +L K + ++ + + + LG F DV
Sbjct: 433 IILANLNAKNIDRAVEILELAEAAGMRDGRSRPFLGTFCDV 473
>gi|255584236|ref|XP_002532856.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527393|gb|EEF29534.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 521
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 135/295 (45%), Gaps = 14/295 (4%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
++ + + + DY+ ++ TK+ GI GE+ F +P + Y L+
Sbjct: 110 VIRERPYRPKELDYSYLLEFTTKLHGISHGEKLFTRIPTEFQNELLYNNLVIACLEKGVI 169
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
+ E +++++ + L++N ++ L+ S G+ + + ++ ++K VV + TYN+
Sbjct: 170 RLSLEYMKKMRELGHPISHLIFNRLIILHSSPGRRKMIPKILTQMKADKVVRHVSTYNIL 229
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA-EK 179
+ A N++ + K EM ++ V + L + A AE+ VEA EK
Sbjct: 230 MKIEANEHNVEGLIKVFGEMKRLEVEPNE-VSFCILAIAHAVARLYTVAEA--YVEAVEK 286
Query: 180 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 239
S T W T D LIILY L K+D+IW +++ + S++YI + ++ +G L
Sbjct: 287 SYTGDNWSTLDVLIILYGYLRKGKKLDRIWGTVKELPH-VRSKSYILAIEAFGRIGQLGR 345
Query: 240 VGEIIDQWKQ----SATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
E+ + K +T F N +L + GL +KA + + + C P
Sbjct: 346 AEELWLEMKSLKGLKSTEQF-----NSMLSIYCKCGLVKKATDIFREMDRNGCKP 395
>gi|297835552|ref|XP_002885658.1| hypothetical protein ARALYDRAFT_899047 [Arabidopsis lyrata subsp.
lyrata]
gi|297331498|gb|EFH61917.1| hypothetical protein ARALYDRAFT_899047 [Arabidopsis lyrata subsp.
lyrata]
Length = 737
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 126/282 (44%), Gaps = 11/282 (3%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M+ K L D+ TR L+ VFG+ + E +P + + Y +LL Y
Sbjct: 83 MIVQKICNLIPEDFTTRFHLIENVFGLEEAGNFVESIPENLRNESIYNSLLSSYVRRNDL 142
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSV--GQVEKVALVVEEIKRKNVVPDIFTYN 118
+KAE F+++++ L A YN M +LY + G KV ++ E+K N+ D T N
Sbjct: 143 DKAESTFKKMRELGLLLRASPYNSMTSLYRRIPHGNRCKVDEILREMKESNIKLDRDTVN 202
Query: 119 LWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAE 178
+ A +I ++KFL E ++ DW+ +++ Y+ + A+
Sbjct: 203 NALRVYADVTHIATMEKFLAEWEGNT--PLDWLTRLDMAKAYLRSGFKGKAKEML----R 256
Query: 179 KSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLK 238
++ R +Y+ L+ LY G + + ++W L K + + ++ S L L +
Sbjct: 257 RTEELRDPKSYEELMRLYGEAGGRKDVYRVW-DLYKKLSKKDNEGFRALIGSLLKLDDIN 315
Query: 239 EVGEI-IDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 279
E +W+ S FD+ L+ ++ + G+ EKA++
Sbjct: 316 GAEEFYYKEWECSGLP-FDVRIPTMLVSSYREKGMVEKADKL 356
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 112/259 (43%), Gaps = 22/259 (8%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFE-GLPLSAKTSETYTALLHLYAGAKW 59
M T F L DYA R+ ++ V G E++FE +P + K Y LL YA +
Sbjct: 412 MSTKTSFNLFPQDYAARLHMIENVLGFEEAEKFFERSIPENMKDDYVYGTLLSCYAKSHK 471
Query: 60 T-EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYN 118
T +KAE +FE++ +N M++LY +G+ EKV ++ ++K N+ PD T N
Sbjct: 472 TLDKAEAIFEKMGDLGFLSKPSPFNSMISLYSQLGKREKVENLISKMKCMNIEPDSLTMN 531
Query: 119 LWISSCAATLNIDQVKKFLDE-MSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA 177
+ A +I + K+ E ++ + + V + N Y A L+ A T +
Sbjct: 532 NVLRMYADETDIKTMDKYKREWINAEKNTKLEMRTMVAMANAYERAGLLLKAIEITRSKN 591
Query: 178 EKSITQRQWITYDFLIILYAGLGNKDKIDQIWK----SLRMTKQKMTSRNYICILSSYLM 233
E R W Y K+K + +K +L + + Y ++SS L
Sbjct: 592 E---VHRLWNEY------------KEKEKRNYKIDDANLCKCRSAVGDEEYQSVISSLLK 636
Query: 234 LGHLKEVGEIIDQWKQSAT 252
L LK EI +W+
Sbjct: 637 LDDLKGAEEIYGEWEPEGP 655
>gi|15220095|ref|NP_178143.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|42572199|ref|NP_974190.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|145327755|ref|NP_001077853.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75262222|sp|Q9C977.1|PP135_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g80270, mitochondrial; Flags: Precursor
gi|12324975|gb|AAG52431.1|AC018848_2 hypothetical protein; 8785-10851 [Arabidopsis thaliana]
gi|17064898|gb|AAL32603.1| Unknown protein [Arabidopsis thaliana]
gi|20259918|gb|AAM13306.1| unknown protein [Arabidopsis thaliana]
gi|332198258|gb|AEE36379.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332198259|gb|AEE36380.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332198260|gb|AEE36381.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 596
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 106/208 (50%), Gaps = 3/208 (1%)
Query: 3 THKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEK 62
+K+ +++ DYA+R+DL K+ G+ GE + +P S K Y LL A +K
Sbjct: 188 ANKKIEMTERDYASRLDLTVKIRGLEKGEACMQKIPKSFKGEVLYRTLLANCVAAGNVKK 247
Query: 63 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 122
+E +F ++K + ++M+ L+ + + +K+A V+ ++++N+ P + TY + I
Sbjct: 248 SELVFNKMKDLGFPLSGFTCDQMLLLHKRIDR-KKIADVLLLMEKENIKPSLLTYKILID 306
Query: 123 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT 182
AT +I +++ L+ M D G D+ + L + + + L + L E E
Sbjct: 307 VKGATNDISGMEQILETMK-DEGVELDF-QTQALTARHYSGAGLKDKAEKVLKEMEGESL 364
Query: 183 QRQWITYDFLIILYAGLGNKDKIDQIWK 210
+ + L+ +YA LG +D++ +IWK
Sbjct: 365 EANRRAFKDLLSIYASLGREDEVKRIWK 392
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV 98
+S TY+ LL +Y K K ++L +R+ +S A ++ ++ LY+ G+VEK
Sbjct: 434 SSSTYSVLLRVYVDHKMLSKGKDLVKRMAESGCRIEATTWDALIKLYVEAGEVEKA 489
>gi|449479004|ref|XP_004155478.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 259
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 78/141 (55%)
Query: 10 SDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFER 69
S A ++ L++K G+ E YF + S++ + Y ALLH Y K +KAE + ++
Sbjct: 103 SPGHIAIQLHLISKARGLEQAEEYFSSIGESSRDHKVYGALLHCYVENKNLKKAEAIMQK 162
Query: 70 VKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLN 129
+++ L YN M+ LY +G+ EK+ +V+E++ + + FTYN+ +++ AA +
Sbjct: 163 MREVGFMKTPLSYNAMLNLYAQLGKHEKLDELVKEMEEMGIGHNRFTYNVRMNAYAAASD 222
Query: 130 IDQVKKFLDEMSCDSGGSDDW 150
I ++K L +M D + DW
Sbjct: 223 ITNMEKLLSKMEADPLVATDW 243
>gi|357139769|ref|XP_003571450.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Brachypodium distachyon]
Length = 517
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 133/295 (45%), Gaps = 14/295 (4%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
++ + + LS+ DY+ ++ KV GI E F +P + Y L+
Sbjct: 106 VIRERPYKLSELDYSYLLEFTAKVHGISEAESLFLRIPQEYRNELLYNNLVMACLELSLI 165
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
+ + ++++ +L + +YN ++ L+ S G+ + + ++ ++K V P TYN+
Sbjct: 166 KLSYGYMRKMRELSLPISPYVYNRLIILHSSEGRRKTIPKILAQMKASKVTPHTSTYNIL 225
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK- 179
+ A NID V + ++M ++ + ++ + + V S T +EA K
Sbjct: 226 LKIQANEHNIDGVARVFNDMKRAKVEPNEITYGILAISHAVARLYTV---SQTYIEAIKN 282
Query: 180 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 239
S+T W T + L+ILY LG + ++ WK +++ + S+++ + ++ +G +++
Sbjct: 283 SMTGTNWSTQEILLILYGYLGKEKELKMTWKLMQVLPH-IRSKSFTLAIEAFGKIGSIEQ 341
Query: 240 V----GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
GEI K T F N +L + G+ +KA+ + C P
Sbjct: 342 AEEIWGEIKSARKLRLTEQF-----NSMLSVYCRHGVVDKASAVFKEMRASGCQP 391
Score = 37.0 bits (84), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 57/124 (45%), Gaps = 5/124 (4%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
S+++T + + E+AEE++ +K + +N M+++Y G V+K + V +
Sbjct: 323 SKSFTLAIEAFGKIGSIEQAEEIWGEIKSARKLRLTEQFNSMLSVYCRHGVVDKASAVFK 382
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
E++ P+ TY C L VK+ L+ M D G + + V ++
Sbjct: 383 EMRASGCQPNAITYRHLALGC---LKAGLVKQALNTM--DMGKKEVVTRKVRNSTPWLET 437
Query: 164 SHLV 167
+H++
Sbjct: 438 THML 441
>gi|224106481|ref|XP_002314181.1| predicted protein [Populus trichocarpa]
gi|222850589|gb|EEE88136.1| predicted protein [Populus trichocarpa]
Length = 525
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 131/281 (46%), Gaps = 14/281 (4%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
+V + + L + DY+ ++ TK GI GE+ F +P + Y L+
Sbjct: 114 VVRERPYRLKELDYSYLLEFTTKHHGISHGEKLFLHVPSEFQNELLYNNLVISCLEKGVI 173
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
+ + +++++ + L++N ++ L+ S G + + ++ +++ VVP + TYN+
Sbjct: 174 RLSLDYMKKMREQGHPISYLIFNRLIILHSSPGSRKMIPKILAQMRADKVVPHVSTYNIL 233
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA-EK 179
+ A NID + K ++M ++ V + L + A AE+ VEA EK
Sbjct: 234 MKIEANEHNIDGLVKVFNDMKRFKVEPNE-VSFCILATAHAAARLYTVAEA--YVEAVEK 290
Query: 180 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 239
S + W T D LIILY LG + ++++ W + + + S++Y+ + +Y +G L
Sbjct: 291 SCSGDNWSTLDVLIILYGHLGKEKELERTW-GIVLELPHVRSKSYMLAIEAYGKIGQLSR 349
Query: 240 VGEIIDQWKQ----SATSDFDISACNRLLGAFSDVGLTEKA 276
E+ + K +T F N +L + GL +KA
Sbjct: 350 AEELWLEMKSIHGLRSTEQF-----NSMLSVYCKHGLIKKA 385
>gi|302798621|ref|XP_002981070.1| hypothetical protein SELMODRAFT_444770 [Selaginella moellendorffii]
gi|300151124|gb|EFJ17771.1| hypothetical protein SELMODRAFT_444770 [Selaginella moellendorffii]
Length = 1138
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 129/278 (46%), Gaps = 11/278 (3%)
Query: 5 KEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAE 64
+ F L+ D R+DL ++ + ER FE L ++ Y ALL Y K +AE
Sbjct: 727 RPFTLTTKDNIFRMDLASRCGSVGKAERIFERLAPEHRSEVAYNALLLSYTKKKKRGRAE 786
Query: 65 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 124
LF+ +K + + N + ++Y + +V ++ +E ++ V D+ YNL + +
Sbjct: 787 RLFKELKATGTISSCYSLNLLASMYRQLRLDAEVLMLAKEAQKLGVELDMCFYNLLLPAK 846
Query: 125 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVE-----AEK 179
++ V+K ++ + + + + NIY++A N + ++E E
Sbjct: 847 FRVQGLEDVEKLYATITSPRDRT-RFFTCLAMANIYVSAGR--NDKVLEMLELIDQGMEA 903
Query: 180 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 239
+Q Y+ LI +YA L + ++++ W+ L+ +Q T +Y CI+ ++ LGH+
Sbjct: 904 GTIVKQRRRYNVLISMYASLEDGARVERTWERLKQQRQPNTE-DYCCIIRAWGKLGHVVR 962
Query: 240 VGEIIDQWKQSATSDFDISAC-NRLLGAFSDVGLTEKA 276
E I Q ++ S N ++ +S G+ E+A
Sbjct: 963 -AETIFQVAEANEKSLKYSTVFNAMMFVYSVAGMREEA 999
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 133/290 (45%), Gaps = 22/290 (7%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M K+F D R+D+ + I ++ F+ L KT++ Y + +++ K
Sbjct: 136 MYYTKQFPQDLDDVILRMDMAVRAKKIRRAQKIFKKLQAWEKTTDAYNTMFLIFSQRKMI 195
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
A++ + + K++ L N + ++ + LY G KV + E+I+ + P + N
Sbjct: 196 LHADDFYYKFKEAKLKPNDITFSILACLYRRCGLHNKVVRLQEDIEAAGMKPCVCFLNNL 255
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA----ESSTLVE 176
+ S I ++ +++ GSD +K +L + A+ ++A ++ L+E
Sbjct: 256 MVSKYELHGISSAEEIFNQLV--PAGSD--LKRSHLSTYSMMAASYLSAGMHDKAQNLLE 311
Query: 177 A-EKSITQRQWI----TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSY 231
EK++ Q + TY LI +Y+ + N+D ++++WK + + + +++Y+ ++ S
Sbjct: 312 VIEKAMDQGSFPKLRRTYHILISMYSTMKNRDGMERVWKKI----EDLKAQDYVAMIES- 366
Query: 232 LMLGHLKEVGEIIDQWKQSATSDF--DISACNRLLGAFSDVGLTEKANEF 279
G EVG +K++ S LLG ++ G +KA +
Sbjct: 367 --CGRADEVGSAEKYFKEADRKGLLNQPSLFAALLGVYAGKGQADKAEKL 414
Score = 44.3 bits (103), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Query: 9 LSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSET--YTALLHLYAGAKWTEKAEEL 66
L DY I+ + + S E+YF+ ++ + ALL +YAG +KAE+L
Sbjct: 355 LKAQDYVAMIESCGRADEVGSAEKYFKEADRKGLLNQPSLFAALLGVYAGKGQADKAEKL 414
Query: 67 FERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
F+++K+ ++S +AL Y+ ++ ++ +++ ++E
Sbjct: 415 FKKMKEQDVSRDALCYHYIILANLNARNIDRAVEILE 451
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 103/221 (46%), Gaps = 28/221 (12%)
Query: 63 AEELFERV-------KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKR---KNVVP 112
AEE+F ++ K+S+LS Y+ M Y+S G +K ++E I++ + P
Sbjct: 268 AEEIFNQLVPAGSDLKRSHLS----TYSMMAASYLSAGMHDKAQNLLEVIEKAMDQGSFP 323
Query: 113 DIF-TYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES 171
+ TY++ IS + N D +++ ++ D D YV ++ A + +AE
Sbjct: 324 KLRRTYHILISMYSTMKNRDGMERVWKKIE-DLKAQD----YVAMIESCGRADEVGSAEK 378
Query: 172 STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSY 231
EA++ Q + L+ +YAG G DK ++++K + K++ SR+ +C Y
Sbjct: 379 -YFKEADRKGLLNQPSLFAALLGVYAGKGQADKAEKLFKKM---KEQDVSRDALCY--HY 432
Query: 232 LMLGHL--KEVGEIIDQWKQSATSDFDISACNRLLGAFSDV 270
++L +L + + ++ + + + LG F DV
Sbjct: 433 IILANLNARNIDRAVEILELAEAAGMRDGRSRPFLGTFCDV 473
>gi|297829684|ref|XP_002882724.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297328564|gb|EFH58983.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 518
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 120/270 (44%), Gaps = 37/270 (13%)
Query: 13 DYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYA--GAKWTEKAEELFERV 70
D A R L+ V G+ E++F+ +P + K YT+LL YA G KAE FE++
Sbjct: 113 DLAVRFHLIENVLGLEEAEKFFQSIPENLKGESIYTSLLKSYAKSGEISLRKAEYTFEKM 172
Query: 71 KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 130
++ + YN M++LY S+ KV ++ E+K N+ D T N + AA ++
Sbjct: 173 RKLGMLLRPSPYNSMVSLYSSLRNRNKVDEILREMKENNLELDSPTVNNALRVYAAVCDV 232
Query: 131 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 190
+ KFL DW + + E T +E K+
Sbjct: 233 ATMDKFL----------ADW-------------NAITTLEWLTTLEMAKAYR-------- 261
Query: 191 FLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI-IDQWKQ 249
LI LY G ++ + +IW + TK+K + + ++ S L L + +I D+W+
Sbjct: 262 -LIRLYGEAGEREDVYRIWDLYKNTKEK-DNEGFRALIGSLLKLDDINGAEKIYYDEWES 319
Query: 250 SATSDFDISACNRLLGAFSDVGLTEKANEF 279
S +FD+ L+ + G+ +KA++
Sbjct: 320 SGL-EFDLRIPTMLMSGYRAKGMVKKADKL 348
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 59/112 (52%), Gaps = 2/112 (1%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFE-GLPLSAKTSETYTALLHLYAGAKW 59
M + F L DYA R L+ KV G+ E++FE +P + K Y LL Y +
Sbjct: 404 MCEKRGFNLFPEDYAIRFHLIEKVLGLEEAEKFFESSIPKNMKDYSVYDTLLTSYTRSDK 463
Query: 60 T-EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNV 110
T KAE +FE++++ +N +++LY+ ++ KV ++ ++K+ N+
Sbjct: 464 TLVKAEGVFEKMRELGFLSKLSPFNSIISLYIEQRKLSKVNKLLCDMKQNNI 515
>gi|8778536|gb|AAF79544.1|AC022464_2 F22G5.3 [Arabidopsis thaliana]
Length = 555
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 125/280 (44%), Gaps = 12/280 (4%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
++ + + L + +Y+ ++ K+ G+ GE+ F +P + Y L+
Sbjct: 144 IIRERPYRLGELEYSYLLEFTVKLHGVSQGEKLFTRVPQEFQNELLYNNLVIACLDQGVI 203
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
A E +++++ + L+YN ++ + G+ + +A + +K P + TY++
Sbjct: 204 RLALEYMKKMRELGYRTSHLVYNRLIIRNSAPGRRKLIAKDLALMKADKATPHVSTYHIL 263
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
+ A NID V K D M +G + V Y L + A AE+ T E EKS
Sbjct: 264 MKLEANEHNIDGVLKAFDGMK-KAGVEPNEVSYCILAMAHAVARLYTVAEAYT-EEIEKS 321
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 240
IT W T D L+ILY LG + ++ + W +R + S++Y+ ++ +G+L
Sbjct: 322 ITGDNWSTLDILMILYGRLGKEKELARTWNVIRGF-HHVRSKSYLLATEAFARVGNLDRA 380
Query: 241 GEIIDQWKQ----SATSDFDISACNRLLGAFSDVGLTEKA 276
E+ + K T F N LL + GL EKA
Sbjct: 381 EELWLEMKNVKGLKETEQF-----NSLLSVYCKDGLIEKA 415
>gi|15222438|ref|NP_172238.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75163930|sp|Q940Q2.1|PPR19_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g07590, mitochondrial; Flags: Precursor
gi|15809864|gb|AAL06860.1| At1g07590/F22G5_2 [Arabidopsis thaliana]
gi|332190025|gb|AEE28146.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 534
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 125/280 (44%), Gaps = 12/280 (4%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
++ + + L + +Y+ ++ K+ G+ GE+ F +P + Y L+
Sbjct: 123 IIRERPYRLGELEYSYLLEFTVKLHGVSQGEKLFTRVPQEFQNELLYNNLVIACLDQGVI 182
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
A E +++++ + L+YN ++ + G+ + +A + +K P + TY++
Sbjct: 183 RLALEYMKKMRELGYRTSHLVYNRLIIRNSAPGRRKLIAKDLALMKADKATPHVSTYHIL 242
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
+ A NID V K D M +G + V Y L + A AE+ T E EKS
Sbjct: 243 MKLEANEHNIDGVLKAFDGMK-KAGVEPNEVSYCILAMAHAVARLYTVAEAYT-EEIEKS 300
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 240
IT W T D L+ILY LG + ++ + W +R + S++Y+ ++ +G+L
Sbjct: 301 ITGDNWSTLDILMILYGRLGKEKELARTWNVIRGF-HHVRSKSYLLATEAFARVGNLDRA 359
Query: 241 GEIIDQWKQ----SATSDFDISACNRLLGAFSDVGLTEKA 276
E+ + K T F N LL + GL EKA
Sbjct: 360 EELWLEMKNVKGLKETEQF-----NSLLSVYCKDGLIEKA 394
>gi|91806413|gb|ABE65934.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 279
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 76/137 (55%), Gaps = 2/137 (1%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEG-LPLSAKTSETYTALLHLYAGAKW 59
M K F L DYATR+ L KV G+ E +FE +P + K Y LL YA +
Sbjct: 142 MCQKKVFNLFSEDYATRLHLTEKVLGLEEAENFFESSIPENMKDYSVYDTLLSCYARSSN 201
Query: 60 TE-KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYN 118
T+ KAE +FE++++ L +N +++LY G++ V +++ ++K KN+ PDI T N
Sbjct: 202 TQSKAEAVFEKMRELGLQSKLSPFNSLISLYSGQGKLSVVNILLCDMKHKNIEPDIVTRN 261
Query: 119 LWISSCAATLNIDQVKK 135
+ + A L ID ++K
Sbjct: 262 NVLRANAYILAIDSMEK 278
>gi|15229739|ref|NP_187745.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|12322901|gb|AAG51439.1|AC008153_12 hypothetical protein; 6614-8314 [Arabidopsis thaliana]
gi|332641514|gb|AEE75035.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 541
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 76/137 (55%), Gaps = 2/137 (1%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEG-LPLSAKTSETYTALLHLYAGAKW 59
M K F L DYATR+ L KV G+ E +FE +P + K Y LL YA +
Sbjct: 404 MCQKKVFNLFSEDYATRLHLTEKVLGLEEAENFFESSIPENMKDYSVYDTLLSCYARSSN 463
Query: 60 TE-KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYN 118
T+ KAE +FE++++ L +N +++LY G++ V +++ ++K KN+ PDI T N
Sbjct: 464 TQSKAEAVFEKMRELGLQSKLSPFNSLISLYSGQGKLSVVNILLCDMKHKNIEPDIVTRN 523
Query: 119 LWISSCAATLNIDQVKK 135
+ + A L ID ++K
Sbjct: 524 NVLRANAYILAIDSMEK 540
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 127/283 (44%), Gaps = 39/283 (13%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYA---GA 57
MV K + L + D++ R L KV + E++FE +P + + Y +LL YA G
Sbjct: 101 MVEQKMYNLPE-DFSARFHLTEKVLNLEEAEKFFESIPENMRFESMYNSLLRSYARQSGE 159
Query: 58 KWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTY 117
K +KAE +F+++K+ L YN M +LY S+G +KV ++ E+K NV D T
Sbjct: 160 KALKKAESVFKKMKKLGLLLRPSPYNSMTSLYSSLGNRDKVDEILREMKENNVELDNVTV 219
Query: 118 NLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA 177
N + AA ++ + KFL + + + T++
Sbjct: 220 NNALRVYAAVSDVATMDKFLAD-----------------------RKEITRLDGLTMLAM 256
Query: 178 EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHL 237
K+ L+ LY G + + ++W + T+QK + + ++ S L LG
Sbjct: 257 AKAYE---------LMSLYGEAGEIEDVHRVWDKYKATRQK-DNEEFRTLIGSLLKLGDT 306
Query: 238 KEVGEI-IDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 279
K +I ++W+ S +FD + L+ + + G+ KA++
Sbjct: 307 KGAEKIYYNEWECSGL-EFDNRIPDMLVSGYREKGMVMKADKL 348
>gi|356498381|ref|XP_003518031.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Glycine max]
Length = 609
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 113/209 (54%), Gaps = 5/209 (2%)
Query: 3 THKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEK 62
++K+ +SDYA+++DL+ K+ G+ E+Y E +P S + Y LL A
Sbjct: 202 SNKKLEFMESDYASQLDLIAKLRGLPKAEKYIESVPESFRGELLYRTLLANCASQNNLIA 261
Query: 63 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 122
E++F ++K +L A N+++ LY + +K+A V+ ++++NV P +FTY + I
Sbjct: 262 TEKIFNKMKDLDLPLTAFACNQLLLLYKKL-DKKKIADVLLLMEKENVKPSLFTYRILID 320
Query: 123 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAE-KSI 181
S + +I +++ + M + D ++ L+ + T+S L + L E E +++
Sbjct: 321 SKGQSNDIAGMEQVFETMKEEGFEPD--IQIQALLARHYTSSGLKEKAEAMLKEMEGENL 378
Query: 182 TQRQWITYDFLIILYAGLGNKDKIDQIWK 210
+ QW+ L+ LYA LG D++++IWK
Sbjct: 379 KENQWVCAT-LLRLYANLGKADEVERIWK 406
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 1/100 (1%)
Query: 23 KVFGIHSGERYFEGLPLSAK-TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALM 81
K+ I E FE + K S+ Y+ LL +YA K K +EL + + S + L
Sbjct: 426 KLNKIEEAEAVFEMVSKKWKLNSKNYSVLLKIYANNKMLTKGKELVKLMADSGVRIGPLT 485
Query: 82 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 121
++ ++ LY+ G+VEK ++ + ++N + +FT L I
Sbjct: 486 WDALVKLYIQAGEVEKADSILHKAIQQNQLQPMFTTYLAI 525
>gi|12321886|gb|AAG50982.1|AC073395_24 hypothetical protein, 3' partial; 101251-102939 [Arabidopsis
thaliana]
Length = 532
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 76/137 (55%), Gaps = 2/137 (1%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEG-LPLSAKTSETYTALLHLYAGAKW 59
M K F L DYATR+ L KV G+ E +FE +P + K Y LL YA +
Sbjct: 396 MCQKKVFNLFSEDYATRLHLTEKVLGLEEAENFFESSIPENMKDYSVYDTLLSCYARSSN 455
Query: 60 TE-KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYN 118
T+ KAE +FE++++ L +N +++LY G++ V +++ ++K KN+ PDI T N
Sbjct: 456 TQSKAEAVFEKMRELGLQSKLSPFNSLISLYSGQGKLSVVNILLCDMKHKNIEPDIVTRN 515
Query: 119 LWISSCAATLNIDQVKK 135
+ + A L ID ++K
Sbjct: 516 NVLRANAYILAIDSMEK 532
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 124/283 (43%), Gaps = 45/283 (15%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYA---GA 57
MV K + L + D++ R L KV + E++FE +P + + Y +LL YA G
Sbjct: 99 MVEQKMYNLPE-DFSARFHLTEKVLNLEEAEKFFESIPENMRFESMYNSLLRSYARQSGE 157
Query: 58 KWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTY 117
K +KAE +F+++K+ L YN M +LY S+G +KV ++ E+K NV D T
Sbjct: 158 KALKKAESVFKKMKKLGLLLRPSPYNSMTSLYSSLGNRDKVDEILREMKENNVELDNVTV 217
Query: 118 NLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA 177
N + AA ++ + KFL +
Sbjct: 218 NNALRVYAAVSDVATMDKFLAD-------------------------------------- 239
Query: 178 EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHL 237
K IT+ +T + Y G + + ++W + T+QK + + ++ S L LG
Sbjct: 240 RKEITRLDGLTMLAMAKAYVRDGEIEDVHRVWDKYKATRQK-DNEEFRTLIGSLLKLGDT 298
Query: 238 KEVGEI-IDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 279
K +I ++W+ S +FD + L+ + + G+ KA++
Sbjct: 299 KGAEKIYYNEWECSGL-EFDNRIPDMLVSGYREKGMVMKADKL 340
>gi|242043362|ref|XP_002459552.1| hypothetical protein SORBIDRAFT_02g006520 [Sorghum bicolor]
gi|241922929|gb|EER96073.1| hypothetical protein SORBIDRAFT_02g006520 [Sorghum bicolor]
Length = 421
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 129/277 (46%), Gaps = 21/277 (7%)
Query: 9 LSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFE 68
+ DYA+ +DL+ + GI + E+Y E +P + ++ Y LL +KAE++F
Sbjct: 30 FEERDYASHLDLVARNHGIEAAEKYIERVPEAFRSEVLYETLLVNCVCRDDAQKAEQVFN 89
Query: 69 RVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI---SSCA 125
+++ +L N+M+ LY V + KV +++ ++ +N+ P +FTY L I
Sbjct: 90 EIRELSLPLTVSACNQMLLLYKRVSR-NKVVDILKLMENENIKPSLFTYKLMIDLKGRSN 148
Query: 126 ATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQ 185
TL ++ V + E +G D+ + YI+ AE T R
Sbjct: 149 DTLGMESVLNLMKE----NGFEPDFGIQTMVAKFYISGDLAEKAEEVTNAMEVYVNANRH 204
Query: 186 WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIID 245
I L+ LYA LG D +++IW T+ K+ +++ + ++ LGH++ E D
Sbjct: 205 AIRS--LLDLYAILGRPDDVERIWNLC--TEPKL--EDFLAAIKAWGKLGHIERAEETFD 258
Query: 246 QWKQSA---TSDFDISACNRLLGAFSDVGLTEKANEF 279
+++ TS + N +L +++ L +K +F
Sbjct: 259 ALVKTSPKLTSKY----FNAMLYVYAENELLDKGKKF 291
>gi|307136024|gb|ADN33878.1| DNA-binding protein [Cucumis melo subsp. melo]
Length = 470
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 105/203 (51%), Gaps = 3/203 (1%)
Query: 8 VLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELF 67
+++D DYA+++DL+ K+ G+ E Y +P S + Y LL + KAEE+F
Sbjct: 193 LVTDRDYASQLDLIGKLRGLRMAENYISKIPKSFQGEVVYRTLLANCVMSTNVRKAEEVF 252
Query: 68 ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAAT 127
++K A N+++ LY + +K+A V+ ++++NV P FTY + I + +
Sbjct: 253 NKMKDLEFPITAFACNQLLLLYKRTDK-KKIADVLLLMEKENVKPSPFTYKILIDAKGLS 311
Query: 128 LNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWI 187
+I +++ +D M + G V + L+ + ++ L + +TL E E+ ++
Sbjct: 312 NDISGMEQVVDTMKAE--GIKLGVGTLLLLAKHYVSAGLKDKAKATLKETEEINSKGSRR 369
Query: 188 TYDFLIILYAGLGNKDKIDQIWK 210
FL+ LY L +D++ ++W+
Sbjct: 370 PCRFLLPLYGELQMEDEVRRLWE 392
>gi|356534606|ref|XP_003535844.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Glycine max]
Length = 600
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 114/209 (54%), Gaps = 5/209 (2%)
Query: 3 THKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEK 62
++K+ +SDYA+++DL+ K+ G+ E+Y E +P S + Y LL A
Sbjct: 193 SNKKLEFMESDYASQLDLIAKLRGLPQAEKYIESVPESFRGELLYRTLLANCASQNNLIA 252
Query: 63 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 122
+E++F ++K +L N+++ LY + +K+A V+ ++++NV P +FTY + I
Sbjct: 253 SEKIFNKMKDLDLPLTVFACNQLLLLYKKL-DKKKIADVLLLMEKENVKPSLFTYRILID 311
Query: 123 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAE-KSI 181
S + +I +++ + M + D ++ L+ + T++ L + L E E +++
Sbjct: 312 SKGHSNDIAGMEQVFETMKEEGFEPD--IQLQALLARHYTSAGLKEKAEAILKEIEGENL 369
Query: 182 TQRQWITYDFLIILYAGLGNKDKIDQIWK 210
++QW+ L+ LYA LG D++++IWK
Sbjct: 370 EEKQWVCAT-LLRLYANLGKADEVERIWK 397
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 102
S+ Y+ LL +YA K K ++L +R+ S L L +N ++ LY+ G+VEK V+
Sbjct: 438 NSKNYSILLKIYANNKMLAKGKDLIKRMADSGLRIGPLTWNALVKLYIQAGEVEKADSVL 497
Query: 103 EE-IKRKNVVPDIFTY 117
++ I++ + P TY
Sbjct: 498 QKAIQQSQLQPMFTTY 513
>gi|297849054|ref|XP_002892408.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338250|gb|EFH68667.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 536
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 124/280 (44%), Gaps = 12/280 (4%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
++ + + + +Y+ ++ K+ G+ GE+ F +P + Y L+
Sbjct: 125 IIRERPYRPGELEYSYLLEFTVKLHGVSQGEKLFTRVPQEFQNELLYNNLVIACLDQGVI 184
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
A E +++++ + L+YN ++ + G+ + +A + +K P + TY++
Sbjct: 185 RLALEYMKKMRELGYRTSHLVYNRLIIRNSAPGRRKLIAKDLALMKADKATPHVSTYHIL 244
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
+ A NID V K D M +G + V Y L + A AE+ T E EKS
Sbjct: 245 MKLEANEHNIDGVLKAFDGMK-KAGVEPNEVSYCILAMAHAVARLYTVAEAYT-EEIEKS 302
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 240
+T W T D L+ILY LG + ++ + W +R + S++Y+ ++ +G+L
Sbjct: 303 VTGNNWSTLDILMILYGRLGKEKELVRTWNVIRGF-HHVRSKSYLLATEAFAQVGNLDRA 361
Query: 241 GEIIDQWKQ----SATSDFDISACNRLLGAFSDVGLTEKA 276
E+ + K T F N LL + GL EKA
Sbjct: 362 EELWLEMKNVRGLKETEQF-----NSLLSVYCKDGLIEKA 396
>gi|357439973|ref|XP_003590264.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479312|gb|AES60515.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 557
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 142/317 (44%), Gaps = 37/317 (11%)
Query: 3 THKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEK 62
++K+ ++ +YA+++DL+ K+ G+ E+Y E +P S + Y LL A + K
Sbjct: 150 SNKKLEFTEKEYASKLDLIAKLRGLPKAEKYLEHVPNSFRGELLYRTLLANCASLENLRK 209
Query: 63 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 122
EE F ++++ A N+++ L +K+A V+ ++++NV P +TY + I
Sbjct: 210 TEETFNKMRELGFPVTAFACNQLL-LIYKKIDKKKIADVLLMMEKENVKPSSYTYKILID 268
Query: 123 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAE-KSI 181
+ +ID + + ++ M + G D + +L Y A+ L + L E E +++
Sbjct: 269 VKGLSNDIDGMSQIVETMKAE-GCELDHLTRASLARHY-AAAGLTEKTEAILKEIEGENL 326
Query: 182 TQRQWITYDFLIILYAGLGNKDKIDQIWK------------------------------- 210
+ W+ L+ LYA LG D++++IWK
Sbjct: 327 KENMWVC-PTLLRLYAILGRADEVERIWKVCESKPRVEDCLAAIEAWGRLKKIEEAEAVF 385
Query: 211 SLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDV 270
+ K K+T+RNY +L Y+ L + ++I S + + + L+ +
Sbjct: 386 EMMSNKWKLTARNYESLLKIYIRHKMLNKGKDLIKTMGDSGCT-IGPTTWDALVSLYVQA 444
Query: 271 GLTEKANEFHMLLLQKN 287
G EKA+ LQ+N
Sbjct: 445 GEVEKADTVLQKALQQN 461
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 27 IHSGERYFEGLPLSAK-TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEM 85
I E FE + K T+ Y +LL +Y K K ++L + + S + ++ +
Sbjct: 378 IEEAEAVFEMMSNKWKLTARNYESLLKIYIRHKMLNKGKDLIKTMGDSGCTIGPTTWDAL 437
Query: 86 MTLYMSVGQVEKVALVVEEIKRKNVVPDIFT 116
++LY+ G+VEK V+++ ++N + +FT
Sbjct: 438 VSLYVQAGEVEKADTVLQKALQQNKMKPMFT 468
>gi|357439923|ref|XP_003590239.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479287|gb|AES60490.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 142/317 (44%), Gaps = 37/317 (11%)
Query: 3 THKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEK 62
++K+ ++ +YA+++DL+ K+ G+ E+Y E +P S + Y LL A + K
Sbjct: 199 SNKKLEFTEKEYASKLDLIAKLRGLPKAEKYLEHVPNSFRGELLYRTLLANCASLENLRK 258
Query: 63 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 122
EE F ++++ A N+++ L +K+A V+ ++++NV P +TY + I
Sbjct: 259 TEETFNKMRELGFPVTAFACNQLL-LIYKKIDKKKIADVLLMMEKENVKPSSYTYKILID 317
Query: 123 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAE-KSI 181
+ +ID + + ++ M + G D + +L Y A+ L + L E E +++
Sbjct: 318 VKGLSNDIDGMSQIVETMKAE-GCELDHLTRASLARHY-AAAGLTEKTEAILKEIEGENL 375
Query: 182 TQRQWITYDFLIILYAGLGNKDKIDQIWK------------------------------- 210
+ W+ L+ LYA LG D++++IWK
Sbjct: 376 KENMWVC-PTLLRLYAILGRADEVERIWKVCESKPRVEDCLAAIEAWGRLKKIEEAEAVF 434
Query: 211 SLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDV 270
+ K K+T+RNY +L Y+ L + ++I S + + + L+ +
Sbjct: 435 EMMSNKWKLTARNYESLLKIYIRHKMLNKGKDLIKTMGDSGCT-IGPTTWDALVSLYVQA 493
Query: 271 GLTEKANEFHMLLLQKN 287
G EKA+ LQ+N
Sbjct: 494 GEVEKADTVLQKALQQN 510
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 27 IHSGERYFEGLPLSAK-TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEM 85
I E FE + K T+ Y +LL +Y K K ++L + + S + ++ +
Sbjct: 427 IEEAEAVFEMMSNKWKLTARNYESLLKIYIRHKMLNKGKDLIKTMGDSGCTIGPTTWDAL 486
Query: 86 MTLYMSVGQVEKVALVVEEIKRKNVVPDIFT 116
++LY+ G+VEK V+++ ++N + +FT
Sbjct: 487 VSLYVQAGEVEKADTVLQKALQQNKMKPMFT 517
>gi|255586139|ref|XP_002533731.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526356|gb|EEF28650.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 137/284 (48%), Gaps = 14/284 (4%)
Query: 18 IDLMTKVFGIHS----GERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVK 71
I+LM ++ G S + F+ +PL + YT +LH Y+ +A E+FER+
Sbjct: 190 IELMVRILGRESQHTVASKLFDVIPLDDYVLDVRAYTTILHAYSRTGKYHRAIEIFERMN 249
Query: 72 QSNLSFNALMYNEMMTLYMSVGQV-EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 130
+S LS + + YN M+ +Y +G+ +K+ +++E++ + + D FT + +S+C I
Sbjct: 250 ESGLSPSLVTYNVMLDVYGKMGRSWDKILELLDEMRSRGLDFDEFTCSTVLSACGREGLI 309
Query: 131 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 190
D+ ++F + + G V Y L++++ A + + S L E E++ +TY+
Sbjct: 310 DEAREFFSGLKSE-GYKPGTVTYNALLHVFGKAG-IFSEALSVLSEMEENNCPPDAVTYN 367
Query: 191 FLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQS 250
++ Y G ++ + ++ + Y I+++Y +G + + E+ DQ +
Sbjct: 368 EVVAAYVRAGFHEEGAVVIDAMASKGIMPNAVTYTTIINAYGRVGDIDKALEMFDQMMEL 427
Query: 251 ATSDFDISACNRLLGAFSDVGLTEKANEF--HMLLLQKNCAPTN 292
+++ N +LG L+E+ + HM L C+P +
Sbjct: 428 GCVP-NVATYNAVLGMLGKKSLSEEMMKILGHMKL--NGCSPNH 468
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 119/270 (44%), Gaps = 5/270 (1%)
Query: 27 IHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNE 84
I +F GL + TY ALLH++ A +A + ++++N +A+ YNE
Sbjct: 309 IDEAREFFSGLKSEGYKPGTVTYNALLHVFGKAGIFSEALSVLSEMEENNCPPDAVTYNE 368
Query: 85 MMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS 144
++ Y+ G E+ A+V++ + K ++P+ TY I++ +ID+ + D+M +
Sbjct: 369 VVAAYVRAGFHEEGAVVIDAMASKGIMPNAVTYTTIINAYGRVGDIDKALEMFDQM-MEL 427
Query: 145 GGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDK 204
G + Y N V + L L + + IT++ ++ + G
Sbjct: 428 GCVPNVATY-NAVLGMLGKKSLSEEMMKILGHMKLNGCSPNHITWNTMLAMCGKKGMHKY 486
Query: 205 IDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLL 264
++Q+++ ++ + + ++S+Y G + ++ ++ ++ S I+ N LL
Sbjct: 487 VNQVFREMKNCGFEPDRDTFNTLISAYGRCGSNNDAAKMHEEMIKAGFSPC-INTYNALL 545
Query: 265 GAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
A + G + A + + K P+ S
Sbjct: 546 NALARRGDWKAAESVILDMRNKGFRPSETS 575
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+ +L+ +YA KAEE+ ++ S + + YN ++ + G +++ ++ E+
Sbjct: 680 THNSLMDMYARGGDCWKAEEVLRMLQTSGGKPDLVSYNTVIKGFCRKGLMQEGIRILSEM 739
Query: 106 KRKNVVPDIFTYNLWISSCAA 126
V P IFTYN +IS AA
Sbjct: 740 TSIGVGPCIFTYNTFISGYAA 760
>gi|413917311|gb|AFW57243.1| hypothetical protein ZEAMMB73_018964 [Zea mays]
Length = 514
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 134/295 (45%), Gaps = 14/295 (4%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
+V + + LS+ DY+ ++ KV GI E F +P + Y L+
Sbjct: 103 IVRERPYKLSELDYSYLLEFTAKVHGISEAESLFLRVPQECRKELLYNNLVMAALDLNHI 162
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
+ + ++++ +L + +YN ++ L+ S G+ + ++ ++ ++K VVP TYN+
Sbjct: 163 KHSYAYMRKMRELSLPISPYVYNRLIILHSSPGRRKTISKILSQMKADRVVPHTSTYNIL 222
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA-EK 179
+ A NID + + + M ++ + Y L + A + T VEA E
Sbjct: 223 LKIQANEHNIDGLARVFNGMKRAKIEPNE-ITYGILAIAHAVAR--LYTVCHTYVEAIEN 279
Query: 180 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 239
S+T W T + L+ILY LG + ++ + W+ ++ + S+++ + ++ +G + +
Sbjct: 280 SMTGTNWSTLEILLILYGYLGKEKELKRTWEIMQDLPH-IRSKSFTLAIEAFGKVGSIDQ 338
Query: 240 VGEI---IDQWKQ-SATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
+I I K+ S T F N +L + G+ +KA+ + C P
Sbjct: 339 AEKIWIHIKSTKKLSLTEQF-----NSMLSVYCRHGVVDKASSVFKEMRANGCQP 388
>gi|225434953|ref|XP_002281058.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial [Vitis vinifera]
Length = 550
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 128/282 (45%), Gaps = 14/282 (4%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
+V + + + DY+ ++ TK+ GI GE+ F +PL + Y L+
Sbjct: 139 VVRERPYRPKELDYSYLLEFTTKLHGISQGEKLFSHVPLEFQNELLYNNLVIACLDKGVI 198
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
+ +++++ + L++N ++ L+ S + + + ++ ++K V + TYN+
Sbjct: 199 RLSLAYMKKMRELGHPISYLVFNRLIILHSSPHRRKIIPRILTQMKADKVARHVSTYNIL 258
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA-EK 179
+ A NI+ + K EM ++ V Y L + A AE+ VEA EK
Sbjct: 259 MKIEANEHNIEGLVKVFGEMKQQQVEPNE-VSYCLLATAHAVAKLYTVAEA--YVEAVEK 315
Query: 180 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 239
SIT W T D LIILY LG +++ W ++ + S++Y+ + ++ +G L
Sbjct: 316 SITGNNWSTLDVLIILYGYLGKPTDLERTWGIVQELPH-VRSKSYMLAIEAFGRIGQLNR 374
Query: 240 VGEIIDQWKQ----SATSDFDISACNRLLGAFSDVGLTEKAN 277
E+ + K +T F N ++ +S G +KA+
Sbjct: 375 AEELWLEIKSKKELKSTEQF-----NSMISVYSKHGFIDKAS 411
>gi|125602283|gb|EAZ41608.1| hypothetical protein OsJ_26140 [Oryza sativa Japonica Group]
Length = 524
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 128/291 (43%), Gaps = 6/291 (2%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
++ + + LS+ DY+ ++ KV GI E F +P + Y L+
Sbjct: 106 IMRERPYKLSELDYSYLLEFTAKVHGISEAESLFLRIPQEYQNELLYNNLVMACLDLGLI 165
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
+ A ++++ +L + +YN ++ L+ S G+ + ++ ++ ++K V P TYN+
Sbjct: 166 KLAYGYKRKMRELSLPISPYVYNRLIILHSSPGRQKTISKILAQMKGDRVTPHTSTYNIL 225
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA-EK 179
+ A NID V + ++M + + + Y L + A + S T VEA E
Sbjct: 226 LKIKANEHNIDGVARVFNDMK-RAKVEPNEITYGILAIAHAVAR--LYTVSHTYVEAIEN 282
Query: 180 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 239
S+T W T + L+ILY G ++ W L + +++I + ++ +G + +
Sbjct: 283 SMTGTNWSTLEILLILYGYHGKAKELKMTW-DLMQGLPHIRPKSFILAIEAFGKVGSIDQ 341
Query: 240 VGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
EI +++ + N +L + GL +KA+ + C P
Sbjct: 342 AEEIWGKFESTRKPKL-TEQFNSILSVYCRHGLVDKASAVFKEMRANGCQP 391
>gi|168049701|ref|XP_001777300.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671276|gb|EDQ57830.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 291
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 116/266 (43%), Gaps = 41/266 (15%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSET-YTALLHLYAGAKWTEKAEELFERVKQ 72
Y T ID + + ++ F + S K Y +LLH Y + E A ELF +KQ
Sbjct: 14 YTTIIDTLGSSGCLDLAKKIFSDMDDSVKKDTVLYNSLLHAYCKSGQVETANELFNSMKQ 73
Query: 73 SNLSFNALMYNEMMTLYMS--VGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 130
+ + YN +M +Y+ VG + KV + +E+ + + PD+ +Y++ +++CA ++
Sbjct: 74 KDCRPDLSTYNTIMNMYVKTDVG-LTKVLSLFKEMCLQGIQPDVVSYDILLAACAPKQHV 132
Query: 131 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA--------------------------- 163
+ ++ D M G V Y +L+ +Y A
Sbjct: 133 KEAQRIFDTMKKRRGIKPTVVTYTSLITVYANAGIYSSPNQLCPLFGEMVAEKCQPNVKT 192
Query: 164 -SHLVNA--------ESSTLVEAEKSI-TQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 213
+ L+N+ E+ T+ EA K + +TY+ LI +Y G +D +++ +
Sbjct: 193 FTSLINSCRKGGHVEEAQTIFEAMKEYGVKPNVVTYNALINVYTERGEQDGAQRVFLQMV 252
Query: 214 MTKQKMTSRNYICILSSYLMLGHLKE 239
+ + T ++ ++SS+ G KE
Sbjct: 253 QSGLQPTGVSFTVLMSSFKATGAFKE 278
>gi|449450908|ref|XP_004143204.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Cucumis sativus]
gi|449517541|ref|XP_004165804.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Cucumis sativus]
Length = 527
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 133/299 (44%), Gaps = 22/299 (7%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
++ K + +++ DY+ ++ K GI GE+ F +P+ + + L+
Sbjct: 115 VIREKPYRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLVIACLDKGAI 174
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
+ ++++ S + L++N ++ L+ S + + + ++ ++K V + TYN+
Sbjct: 175 RLSLAYMRKMREVGHSISHLVFNRLIILHSSFRRRKIIPKILSQMKADKVPLHVSTYNIL 234
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA--- 177
+ A NI+ + + +M ++ V+ I A+ A+ T+VEA
Sbjct: 235 MKIEANEHNIEGLMRVFSDMRRAKVEPNE-------VSYCIVATAHAVAKLYTVVEAYVE 287
Query: 178 --EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLG 235
EKSI W TYD LIILY L + ++++ W ++ + S+++I + ++ +G
Sbjct: 288 ALEKSIAGNNWSTYDVLIILYGYLNKEKELERTWGIIQGFPH-IPSKSFILAIEAFGRIG 346
Query: 236 HLKEVGEIIDQWKQ----SATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
L E+ + K AT F N +L + GL +KA E + C P
Sbjct: 347 LLSRAEELWLEMKTKRGIKATDQF-----NSILSVYCRHGLIKKATEIFRKIEANGCKP 400
>gi|302798905|ref|XP_002981212.1| hypothetical protein SELMODRAFT_420695 [Selaginella moellendorffii]
gi|300151266|gb|EFJ17913.1| hypothetical protein SELMODRAFT_420695 [Selaginella moellendorffii]
Length = 414
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 126/298 (42%), Gaps = 50/298 (16%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M+ +K F + +SD+ ++L+ ++ + ++E +P ++ + YTA+L ++A
Sbjct: 29 MIRNKVFEIEESDHVLLLELVGRISKFQATRCFWE-MPAELRSEDAYTAMLQVFARWHAI 87
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
AE+ +K NL YN M+ +Y + +KV + +E+ V PD TY +
Sbjct: 88 PAAEDTMSEMKSLNLITRVEPYNIMLDMYKRKNEDDKVRAMYDELSSLGVAPDAHTYLIV 147
Query: 121 ISSCAATLNID----QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVE 176
+ + D +V+KFLDE
Sbjct: 148 LRAKQKIGGFDGIEAEVRKFLDE------------------------------------- 170
Query: 177 AEKSITQRQWI-TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLG 235
+T RQ + Y+ ++ +Y L + I+ + L T +K +S +Y C+L SY LG
Sbjct: 171 ---QLTSRQPLFIYECMLRIYTLLRDLAAIENLRSILLKTFKKFSSSSYNCLLDSYRQLG 227
Query: 236 HLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKN--CAPT 291
++ + ++ T +I + ++ ++ G EKANE + L + C P
Sbjct: 228 EVERAERLFNEIGNKFT--LNIQSYRAMIAVYASNGRMEKANELYKQLFRAGFECHPA 283
>gi|302798915|ref|XP_002981217.1| hypothetical protein SELMODRAFT_420704 [Selaginella moellendorffii]
gi|300151271|gb|EFJ17918.1| hypothetical protein SELMODRAFT_420704 [Selaginella moellendorffii]
Length = 541
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 119/277 (42%), Gaps = 41/277 (14%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
++ K F L+D D+ R+D T+ + F + KT Y LL +A A
Sbjct: 167 VIVEKPFQLTDFDHLVRMDFHTRELKVDKVLTCFNRI--QDKTETCYVLLLQAFATAHRK 224
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK-NVVPDIFTYNL 119
E+A ++ +++K+ L N+ YN ++ +Y+ +G +++ + E+K K NV PD FTY
Sbjct: 225 ERALDVLKQMKELVLITNSYSYNLVIAMYLRMGLIDEAKEMFAELKDKSNVAPDAFTY-- 282
Query: 120 WISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK 179
LN+ + S D+ G DD L + ++ +K
Sbjct: 283 --------LNLLK--------SRDALGMDD----------------LEDTIEEFFLDVDK 310
Query: 180 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 239
T +W LI LY +G K ++++W+ + + M ++ + S+ M G +K+
Sbjct: 311 IPTGFEWRN---LIRLYGAMGKKKDVERLWREQKRVAEYMPESYFLAAIESFGMNGEMKQ 367
Query: 240 VGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
EI Q ++ C +L + GL A
Sbjct: 368 FEEICKQL-EAQNQKLSERQCFTMLKVYCMNGLMNDA 403
>gi|302801862|ref|XP_002982687.1| hypothetical protein SELMODRAFT_422000 [Selaginella moellendorffii]
gi|300149786|gb|EFJ16440.1| hypothetical protein SELMODRAFT_422000 [Selaginella moellendorffii]
Length = 541
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 118/277 (42%), Gaps = 41/277 (14%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
++ K F L+D D+ R+D T+ + F + KT Y LL +A A
Sbjct: 167 VIVEKPFQLTDFDHLVRMDFHTRELKVDKVLTCFNRI--QDKTETCYVLLLQAFATAHRK 224
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK-NVVPDIFTYNL 119
E+A ++ +++K+ L N YN ++ +Y+ +G +++ + E+K K NV PD FTY
Sbjct: 225 ERALDVLKQMKELVLITNPYSYNLVIAMYLRMGLIDEAKEMFAELKDKSNVAPDAFTY-- 282
Query: 120 WISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK 179
LN+ + S D+ G DD L + ++ +K
Sbjct: 283 --------LNLLK--------SRDALGMDD----------------LEDTIEEFFLDVDK 310
Query: 180 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 239
T +W LI LY +G K ++++W+ + + M ++ + S+ M G +K+
Sbjct: 311 IPTGFEWRN---LIRLYGAMGKKKDVERLWREQKRVAEYMPESYFLAAIESFGMNGEMKQ 367
Query: 240 VGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
EI Q ++ C +L + GL A
Sbjct: 368 FEEICKQL-EAQNQKLSERQCFTMLKVYCMNGLMNDA 403
>gi|147819559|emb|CAN76564.1| hypothetical protein VITISV_029137 [Vitis vinifera]
Length = 449
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 103/240 (42%), Gaps = 2/240 (0%)
Query: 55 AGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDI 114
A AK E++ E KQ N + ++TLY G E + +E+ + N +
Sbjct: 181 AKAKKFSFIEDILEHQKQYNEISTEVFAVRLITLYGKAGMFEHAHKLFDEMPKLNCERTV 240
Query: 115 FTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTL 174
++N +S+C + D++ F E+ + G D V Y LVN + L +A S L
Sbjct: 241 MSFNALLSACVNSKKFDKIDGFFQELPRNLGIVPDVVSYNILVNAFCEMGSLDSA-LSVL 299
Query: 175 VEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLML 234
E EK + IT++ L+ ++ G+ ++IW ++ R+Y L +
Sbjct: 300 DEMEKVGLEPDLITFNTLLNVFYQSGSNADGEKIWDLMKKNNVAPNVRSYNAKLRGVISE 359
Query: 235 GHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
+ E +ID+ K S D+ N L+ F + G E+A +H + P A+
Sbjct: 360 NRMSEAVNLIDEMKTSGIKP-DVFTLNSLMKGFCNAGNLEEAKRWHSEIAINELPPVRAT 418
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 20/98 (20%), Positives = 54/98 (55%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+ LL+++ + E++++ +K++N++ N YN + +S ++ + +++E+
Sbjct: 313 TFNTLLNVFYQSGSNADGEKIWDLMKKNNVAPNVRSYNAKLRGVISENRMSEAVNLIDEM 372
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCD 143
K + PD+FT N + N+++ K++ E++ +
Sbjct: 373 KTSGIKPDVFTLNSLMKGFCNAGNLEEAKRWHSEIAIN 410
>gi|5103846|gb|AAD39676.1|AC007591_41 F9L1.43 [Arabidopsis thaliana]
Length = 623
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 121/238 (50%), Gaps = 11/238 (4%)
Query: 4 HKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKA 63
+K+F + + DYA R+DL++KV G + GE Y + +P S + Y LL + A
Sbjct: 216 NKQFEMEERDYACRLDLISKVRGWYKGEAYIKTIPESFRGELVYRTLLANHVATSNVRTA 275
Query: 64 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 123
E +F ++K + N+M+ LY V + +K+A V+ ++++N+ P++ TY + I +
Sbjct: 276 EAVFNKMKDLGFPLSTFTCNQMLILYKRVDK-KKIADVLLLLEKENLKPNLNTYKILIDT 334
Query: 124 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAE-KSIT 182
++ +I +++ ++ M S G + ++ L+ + ++ L L E E +S+
Sbjct: 335 KGSSNDITGMEQIVETMK--SEGVELDLRARALIARHYASAGLKEKAEKVLKEMEGESLE 392
Query: 183 QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 240
+ + + D L + Y L +D++ ++WK + Y +L++ L G + +V
Sbjct: 393 ENRHMCKDLLSV-YGYLQREDEVRRVWKICEENPR------YNEVLAAILAFGKIDKV 443
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 67/144 (46%), Gaps = 4/144 (2%)
Query: 23 KVFGIHSGERYFEG-LPLSAK-TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 80
K+ + E FE L +S + +S Y+ LL +Y K + ++L +++ S + AL
Sbjct: 439 KIDKVKDAEAVFEKVLKMSHRVSSNVYSVLLRVYVDHKMVSEGKDLVKQMSDSGCNIGAL 498
Query: 81 MYNEMMTLYMSVGQVEKV-ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE 139
++ ++ LY+ G+VEK + + + I+ K + P + ++ + ++ +K
Sbjct: 499 TWDAVIKLYVEAGEVEKAESSLSKAIQSKQIKPLMSSFMYLMHEYVRRGDVHNTEKIFQR 558
Query: 140 MSCDSGGSDDWVKYVNLVNIYITA 163
M S W Y L+ Y+ A
Sbjct: 559 MKQAGYQSRFWA-YQTLIQAYVNA 581
>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
Length = 924
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 114/247 (46%), Gaps = 8/247 (3%)
Query: 33 YFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSV 92
+ EG +S TY+ L+ Y + E A+++ E ++++ S N + YN ++
Sbjct: 233 FMEGAGISPDVY-TYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRA 291
Query: 93 GQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVK 152
G +E+ +E++ +VPD FTY I+ DQ K LDEMSC +G + V
Sbjct: 292 GAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSC-AGLMPNVVV 350
Query: 153 YVNLVNIYITASHLVNAESSTLVEAEKSIT--QRQWITYDFLIILYAGLGNKDKIDQIWK 210
Y L++ ++ NA+ + + E S Q ITYD LI LG + +I K
Sbjct: 351 YSTLIDGFMRQG---NADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILK 407
Query: 211 SLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDV 270
+ + Y ++ +L + +E ++++ ++ S ++ + ++ +
Sbjct: 408 QMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISP-NVYTYSIIINGLCQI 466
Query: 271 GLTEKAN 277
G +E+A+
Sbjct: 467 GESERAS 473
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 61/125 (48%), Gaps = 1/125 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY+ +++ +E+A L E++ L NA +Y +++ Y G ++++
Sbjct: 455 TYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKM 514
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
R+N+ PD++ YN I + +D+ ++ DEM + G + Y L++ Y A +
Sbjct: 515 TRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEM-LEKGFQPNDFTYGGLIHGYSMAGN 573
Query: 166 LVNAE 170
L AE
Sbjct: 574 LEKAE 578
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 91/207 (43%), Gaps = 5/207 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L+H Y+ A EKAE+L ++ S L+ N +Y +++ Y +EKV+ ++ +
Sbjct: 560 TYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSM 619
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K ++PD Y + I + +++ ++ L + +G D + Y +L++ + A+
Sbjct: 620 LEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIE-KNGLVPDSLIYGSLISGFCKAAD 678
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ A L E K + Y+ LI + + I+ S+ Y
Sbjct: 679 MEKA-VGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYT 737
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSAT 252
++ Y G +++ ID + + T
Sbjct: 738 TLIDGYCKAGDIRDA---IDLYNEMLT 761
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 88/195 (45%), Gaps = 20/195 (10%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y ++H + + + A + ++++ L ++L+Y +++ + +EK +++E+
Sbjct: 631 YGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMA 690
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
+K + P I YN I + +I + + + C G + V Y L++ Y A +
Sbjct: 691 KKGIEPGISCYNALIDGFCKSDDISHARNIFNSIIC-KGLPPNCVTYTTLIDGYCKAGDI 749
Query: 167 VNA---ESSTLVEAEKSITQRQWITYDFLI--ILYAGLGNKDKIDQIWKSLRMTKQKMTS 221
+A + L E + D + +L AG N + Q +L +T ++M +
Sbjct: 750 RDAIDLYNEMLTEG---------VAPDAFVYSVLAAGCSNSGDLQQ---ALFIT-EEMIA 796
Query: 222 RNYICILSSYLMLGH 236
R Y I+SS+ L H
Sbjct: 797 RGY-AIISSFNTLVH 810
Score = 43.9 bits (102), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 47/247 (19%), Positives = 103/247 (41%), Gaps = 3/247 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L+ +A + +++ + + + YN ++ ++ E+ L++ E+
Sbjct: 385 TYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEM 444
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
++ + P+++TY++ I+ ++ L++M D + +V Y L++ Y
Sbjct: 445 RKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFV-YAPLISGYCREGS 503
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
A TL + + Y+ LII + +G D+ + + + + Y
Sbjct: 504 FSLA-CETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYG 562
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 285
++ Y M G+L++ +++ Q S + D L G F L EK + +L+
Sbjct: 563 GLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNL-EKVSSTLKSMLE 621
Query: 286 KNCAPTN 292
K P N
Sbjct: 622 KGLMPDN 628
>gi|449506011|ref|XP_004162628.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 613
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 136/302 (45%), Gaps = 37/302 (12%)
Query: 11 DSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERV 70
+ DYA+R+DL+ K+ G+ E Y +P S + Y LL A +KAEE+F ++
Sbjct: 212 EKDYASRLDLIGKLRGLRMAENYIAKIPKSFQGEVVYRTLLANCVIACNVQKAEEVFNKM 271
Query: 71 KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 130
K A N+++ LY + KVA ++ ++++NV P FTY + I + + +I
Sbjct: 272 KDLEFPITAFACNQLLLLYKRTDK-RKVADILLLMEKENVKPSRFTYRILIDTKGLSNDI 330
Query: 131 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 190
+++ +D M + G + V ++++ + + L + + L E E+ ++
Sbjct: 331 TGMEQVVDTMKAE--GIELDVSTLSVLAKHYISGGLKDKAKAILKEMEEINSEGSRWPCR 388
Query: 191 FLIILYAGLGNKDKIDQIWK--------------------------------SLRMTKQK 218
L+ LY L +D++ ++W+ + T +K
Sbjct: 389 ILLPLYGELQMEDEVRRLWEICGSNPHIEECMAAIVAWGKLKNIQEAEKIFDRVVKTGEK 448
Query: 219 MTSRNYICILSSYLMLGHLKEVG-EIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 277
+++R+Y +L+ Y + G E++ Q +S S D + ++ + + G EKA+
Sbjct: 449 LSARHYSTMLNVYREDSKMLTKGKEVVKQMAESG-SRMDPVTLDAVVKLYVEAGEVEKAD 507
Query: 278 EF 279
F
Sbjct: 508 SF 509
>gi|145335742|ref|NP_173001.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806396|sp|Q9XI21.2|PPR44_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g15480, mitochondrial; Flags: Precursor
gi|332191207|gb|AEE29328.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 594
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 121/238 (50%), Gaps = 11/238 (4%)
Query: 4 HKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKA 63
+K+F + + DYA R+DL++KV G + GE Y + +P S + Y LL + A
Sbjct: 187 NKQFEMEERDYACRLDLISKVRGWYKGEAYIKTIPESFRGELVYRTLLANHVATSNVRTA 246
Query: 64 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 123
E +F ++K + N+M+ LY V + +K+A V+ ++++N+ P++ TY + I +
Sbjct: 247 EAVFNKMKDLGFPLSTFTCNQMLILYKRVDK-KKIADVLLLLEKENLKPNLNTYKILIDT 305
Query: 124 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAE-KSIT 182
++ +I +++ ++ M S G + ++ L+ + ++ L L E E +S+
Sbjct: 306 KGSSNDITGMEQIVETMK--SEGVELDLRARALIARHYASAGLKEKAEKVLKEMEGESLE 363
Query: 183 QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 240
+ + + D L + Y L +D++ ++WK + Y +L++ L G + +V
Sbjct: 364 ENRHMCKDLLSV-YGYLQREDEVRRVWKICEENPR------YNEVLAAILAFGKIDKV 414
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 67/144 (46%), Gaps = 4/144 (2%)
Query: 23 KVFGIHSGERYFEG-LPLSAK-TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 80
K+ + E FE L +S + +S Y+ LL +Y K + ++L +++ S + AL
Sbjct: 410 KIDKVKDAEAVFEKVLKMSHRVSSNVYSVLLRVYVDHKMVSEGKDLVKQMSDSGCNIGAL 469
Query: 81 MYNEMMTLYMSVGQVEKV-ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE 139
++ ++ LY+ G+VEK + + + I+ K + P + ++ + ++ +K
Sbjct: 470 TWDAVIKLYVEAGEVEKAESSLSKAIQSKQIKPLMSSFMYLMHEYVRRGDVHNTEKIFQR 529
Query: 140 MSCDSGGSDDWVKYVNLVNIYITA 163
M S W Y L+ Y+ A
Sbjct: 530 MKQAGYQSRFWA-YQTLIQAYVNA 552
>gi|414884017|tpg|DAA60031.1| TPA: hypothetical protein ZEAMMB73_016344 [Zea mays]
Length = 703
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 115/235 (48%), Gaps = 8/235 (3%)
Query: 11 DSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERV 70
+ DYA+ +DL+ + +G+ + ++Y E +P + ++ Y LL +KAE++F +
Sbjct: 314 ERDYASHLDLIARNYGVEAAQKYIERVPEAFRSEVLYETLLVNCVCRDDAQKAEQVFNEI 373
Query: 71 KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 130
++ +L N+M+ LY V + KV ++ ++++N+ IFTY L I + +I
Sbjct: 374 RELSLPLTISACNQMLLLYKRVSR-NKVVDILTLMEKENIKYSIFTYKLMIDLKVRSNDI 432
Query: 131 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 190
+++ L+ M ++G ++ + YI+ AE ++ A + +
Sbjct: 433 LGMEQVLNSMK-ENGLEPNFTIQTMVAKFYISGCFTEKAEE--VINAMEVHVKANRHAVR 489
Query: 191 FLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIID 245
L+ LYA LG ++++W K + +++ + ++ LGH++ EI D
Sbjct: 490 SLLDLYAILGRPVDVERVWNLCAEPKLE----DFLAAIKAWSKLGHIERAEEIFD 540
>gi|449436321|ref|XP_004135941.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Cucumis sativus]
gi|449514880|ref|XP_004164505.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Cucumis sativus]
Length = 477
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 116/258 (44%), Gaps = 9/258 (3%)
Query: 23 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 82
K+FG+ ++++E +TYT LL L K E+A LFE + L + +Y
Sbjct: 112 KIFGLLRQQQWYE------PRCQTYTKLLMLLGKCKQPEQASLLFEIMFSEGLKPSIDVY 165
Query: 83 NEMMTLYMSVGQVEKVALVVEEIKR-KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 141
+++ Y G + K V+E+K + PD+ TY++ I C D +KK L +MS
Sbjct: 166 TALVSAYGQSGLLHKAISTVDEMKSISDCKPDVHTYSILIDCCTRLRRFDLLKKILADMS 225
Query: 142 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 201
C G + + V Y ++N + A ES L E IT++ I Y
Sbjct: 226 C-LGITCNTVTYNTIINGFGKAKMFEQMESLLLEMIESDSCPPDLITFNTFIRAYGNSEQ 284
Query: 202 KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 261
+K+++ +K ++ + Y ++SSY G ++ +++ ++ S I N
Sbjct: 285 IEKMEKWYKEFQLMGIEPDIWTYNSMISSYGKAGMYDKMKSVLNFMEKRFFSP-TIVTMN 343
Query: 262 RLLGAFSDVGLTEKANEF 279
++ +F G E+ E+
Sbjct: 344 TIIDSFGRAGNIEEMEEY 361
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 111/275 (40%), Gaps = 46/275 (16%)
Query: 17 RIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELF-ERVKQSNL 75
R DL+ K+ S L ++ T TY +++ + AK E+ E L E ++ +
Sbjct: 213 RFDLLKKILADMSC------LGITCNTV-TYNTIINGFGKAKMFEQMESLLLEMIESDSC 265
Query: 76 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKK 135
+ + +N + Y + Q+EK+ +E + + PDI+TYN ISS D++K
Sbjct: 266 PPDLITFNTFIRAYGNSEQIEKMEKWYKEFQLMGIEPDIWTYNSMISSYGKAGMYDKMKS 325
Query: 136 FLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIIL 195
L+ M EK +T + +I
Sbjct: 326 VLNFM-------------------------------------EKRFFSPTIVTMNTIIDS 348
Query: 196 YAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDF 255
+ GN +++++ +K+++ K S Y ++++Y G L++V I+ Q + S
Sbjct: 349 FGRAGNIEEMEEYFKNMKFQGMKPNSVTYCSLVNAYGKSGDLEKVDSILRQIENSDVVP- 407
Query: 256 DISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
D N L+ + G K E + + + C P
Sbjct: 408 DTPLFNCLINVYGQAGNVRKMGELFLEMKENKCVP 442
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 53/113 (46%), Gaps = 2/113 (1%)
Query: 16 TRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVKQS 73
T ID + I E YF+ + S TY +L++ Y + EK + + +++ S
Sbjct: 344 TIIDSFGRAGNIEEMEEYFKNMKFQGMKPNSVTYCSLVNAYGKSGDLEKVDSILRQIENS 403
Query: 74 NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAA 126
++ + ++N ++ +Y G V K+ + E+K VPD T+ I + A
Sbjct: 404 DVVPDTPLFNCLINVYGQAGNVRKMGELFLEMKENKCVPDGITFATMIRALKA 456
>gi|218200516|gb|EEC82943.1| hypothetical protein OsI_27919 [Oryza sativa Indica Group]
Length = 500
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 125/278 (44%), Gaps = 6/278 (2%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
++ + + LS+ DY+ ++ KV GI E F +P + Y L+
Sbjct: 107 IMRERPYKLSELDYSYLLEFTAKVHGISEAESLFLRIPQEYQNELLYNNLVMACLDLGLI 166
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
+ A ++++ +L + +YN ++ L+ S G+ + ++ ++ ++K V P TYN+
Sbjct: 167 KLAYGYKRKMRELSLPISPYVYNRLIILHSSPGRQKTISKILAQMKGDRVTPHTSTYNIL 226
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA-EK 179
+ A NID V + ++M ++ + Y L + A + S T VEA E
Sbjct: 227 LKIKANEHNIDGVARVFNDMKRAKVEPNE-ITYGILAIAHAVAR--LYTVSHTYVEAIEN 283
Query: 180 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 239
S+T W T + L+ILY G ++ W L + +++I + ++ +G + +
Sbjct: 284 SMTGTNWSTLEILLILYGYHGKAKELKMTW-DLMQGLPHIRPKSFILAIEAFGKVGSIDQ 342
Query: 240 VGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 277
EI +++ + N +L + GL +KA+
Sbjct: 343 AEEIWGKFESTRKPKLT-EQFNSILSVYCRHGLVDKAS 379
>gi|302798913|ref|XP_002981216.1| hypothetical protein SELMODRAFT_53460 [Selaginella moellendorffii]
gi|300151270|gb|EFJ17917.1| hypothetical protein SELMODRAFT_53460 [Selaginella moellendorffii]
Length = 463
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 118/255 (46%), Gaps = 5/255 (1%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYF-EGLP-LSAKTSETYTALLHLYAGAK 58
++ + L + +DL +V +++ + + +P + AK+ + Y
Sbjct: 63 VIKERSLELQKFHFINHLDLTGRVVNMNAAKNFLLTKMPRVYAKSEAALITMFENYVIHS 122
Query: 59 WTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYN 118
KA + + +K+ NL A +N++ LY + + + + +++ E++ + P++ TYN
Sbjct: 123 LLSKARLVLKLMKEKNLLTTATAFNKLFHLYANKKKEDGIPVILREMRDMRISPNVETYN 182
Query: 119 LWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAE 178
+ I A + + +++ +M CD G+ + L + Y+ A A + L EA
Sbjct: 183 ILIGIKAKKGDTEGMERLFSKMKCDGDGTPNCEILCTLASGYVNAGDHEKA-MAYLKEAV 241
Query: 179 KSIT-QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHL 237
S Q +D +I LYA +G D ID+IW+ R +++ +Y+ +++Y +G +
Sbjct: 242 ASEEFQESRRVHDKVIALYAAMGRADMIDRIWRFTRRFPV-VSANSYVATIAAYEKVGRI 300
Query: 238 KEVGEIIDQWKQSAT 252
++ + + T
Sbjct: 301 DRAEKVFAELTEKRT 315
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 65/164 (39%), Gaps = 3/164 (1%)
Query: 3 THKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGL--PLSAKTSETYTALLHLYAGAKWT 60
T + V+S + Y I KV I E+ F L + Y L Y
Sbjct: 276 TRRFPVVSANSYVATIAAYEKVGRIDRAEKVFAELTEKRTLLRPAHYVPLFRAYCEGGEM 335
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
KAE+L ER++ N N L Y+ ++ YM G + A + + + V P T L
Sbjct: 336 GKAEKLLERIRHGNGHINNLSYHHLVAGYMKSGNPKMAAETLNRMFEERVPPCFDTVMLI 395
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+ A ++ + +M +S + + Y +L+ Y+ A
Sbjct: 396 LKEHAKNADVSSAELLFQDMRRES-YNKNVAAYNSLLEAYVNAG 438
>gi|125599572|gb|EAZ39148.1| hypothetical protein OsJ_23575 [Oryza sativa Japonica Group]
Length = 610
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 124/278 (44%), Gaps = 8/278 (2%)
Query: 13 DYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQ 72
DYA +DL+ + GI + ++Y + +PL + Y L+ A +KAEE+F+ +K
Sbjct: 214 DYACHLDLIARSHGIETAQKYIKRVPLPFRNEVLYETLIVNCVLAGDIQKAEEVFKEIKD 273
Query: 73 SNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQ 132
L + N+M+ LY + KVA V+ ++++NV P FTY L I + ++
Sbjct: 274 LCLRLTVTLCNQMILLYKRIAP-GKVASVLMLMEKENVKPSAFTYRLLIDLKGRSNDLAG 332
Query: 133 VKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTL-VEAEKSITQRQWITYDF 191
++ L+EM G + YI AE+ +EA+ S ++
Sbjct: 333 IEVVLNEMKA-YGIEPSTSTQTMVARFYIHGGLTEKAEAVVKEMEAQLSNSKDGRHVIKS 391
Query: 192 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 251
L+ LYA L + + +IW+ M + M +++ + ++ LG +++ E + +A
Sbjct: 392 LLHLYAALNKPNDVARIWE---MCTEPMLE-DFLSAIKAWGELGLIEKAEETFEAM-ANA 446
Query: 252 TSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCA 289
N +L ++ L K +F + + C
Sbjct: 447 PEKLSSKYYNAMLNVYAQNKLLSKGKQFVERMCRDGCP 484
Score = 44.3 bits (103), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 74/157 (47%), Gaps = 9/157 (5%)
Query: 13 DYATRIDLMTKVFGIHSGERYFEGLPLSAK--TSETYTALLHLYAGAKWTEKAEELFERV 70
D+ + I ++ I E FE + + + +S+ Y A+L++YA K K ++ ER+
Sbjct: 419 DFLSAIKAWGELGLIEKAEETFEAMANAPEKLSSKYYNAMLNVYAQNKLLSKGKQFVERM 478
Query: 71 KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPD---IFT-YNLWISSCAA 126
+ L ++ ++ LY++ G+VEK + + +N PD +FT Y + A
Sbjct: 479 CRDGCPNGPLTWDALINLYVNSGEVEKADSFLLNVAEEN--PDRKPLFTSYFFLMKGYAK 536
Query: 127 TLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
+I +K D + + G + + Y L+ Y+ A
Sbjct: 537 RGDIHNTEKIFDRLK-NVGYAPRPLHYAVLLEAYVNA 572
Score = 40.8 bits (94), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 83/188 (44%), Gaps = 12/188 (6%)
Query: 49 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 108
+LLHLYA ++E + M + ++ + G++ + E +
Sbjct: 391 SLLHLYAALNKPNDVARIWEMCTEP-------MLEDFLSAIKAWGELGLIEKAEETFEAM 443
Query: 109 NVVPDIFT---YNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
P+ + YN ++ A + + K+F++ M C G + + + L+N+Y+ +
Sbjct: 444 ANAPEKLSSKYYNAMLNVYAQNKLLSKGKQFVERM-CRDGCPNGPLTWDALINLYVNSGE 502
Query: 166 LVNAESSTLVEAEKSITQRQWIT-YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
+ A+S L AE++ ++ T Y FL+ YA G+ ++I+ L+ +Y
Sbjct: 503 VEKADSFLLNVAEENPDRKPLFTSYFFLMKGYAKRGDIHNTEKIFDRLKNVGYAPRPLHY 562
Query: 225 ICILSSYL 232
+L +Y+
Sbjct: 563 AVLLEAYV 570
>gi|224126121|ref|XP_002329666.1| predicted protein [Populus trichocarpa]
gi|222870547|gb|EEF07678.1| predicted protein [Populus trichocarpa]
Length = 821
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 130/280 (46%), Gaps = 10/280 (3%)
Query: 18 IDLMTKVFGIHS----GERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVK 71
++LM ++ G S + F+ +PL + + YT +LH Y+ E+A +FE++
Sbjct: 177 VELMARILGRESQHSIASKLFDVIPLDDYSLDVRAYTTILHSYSRCGKYERAVAIFEKMN 236
Query: 72 QSNLSFNALMYNEMMTLYMSVGQV-EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 130
+S LS + YN M+ +Y +G+ K+ +++E++ K + D FT + IS+C +
Sbjct: 237 ESGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSKGLGFDEFTCSTVISACGREGLL 296
Query: 131 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 190
D+ K+F + G + V Y L+ ++ A + + S + E E + +TY+
Sbjct: 297 DEAKEFFVGLK-SQGYAPGTVTYNALLQVFGKAG-IYSEALSIMKEMEDNNCPPDAVTYN 354
Query: 191 FLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQS 250
L+ Y G ++ + ++ K + Y ++++Y + + + DQ K+S
Sbjct: 355 ELVAAYVRAGFYEEGAALIDTMTENGIKPNAVTYTTMINAYGRAAQVDKALSLYDQMKES 414
Query: 251 ATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
+ ++ N +LG +E+ + + CAP
Sbjct: 415 GCAP-NVCTYNAILGMLGKKSQSEEMMKILCDMKVDGCAP 453
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 94/235 (40%), Gaps = 41/235 (17%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L+ Y A + E+ L + + ++ + NA+ Y M+ Y QV+K + +++
Sbjct: 352 TYNELVAAYVRAGFYEEGAALIDTMTENGIKPNAVTYTTMINAYGRAAQVDKALSLYDQM 411
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS-----------------CDSGGSD 148
K P++ TYN + +++ K L +M C + G
Sbjct: 412 KESGCAPNVCTYNAILGMLGKKSQSEEMMKILCDMKVDGCAPNRITWNTMLSMCGNKGMH 471
Query: 149 DWVKYV-------------NLVNIYITASHLVNAESSTLVEAEKSITQ-------RQWIT 188
+VK V + N ITAS ++ ++AEK + T
Sbjct: 472 KYVKRVFQEMKSCGFEPDRDTFNTLITASGRCGSD----IDAEKIYDEMLEAGFTPSVAT 527
Query: 189 YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI 243
Y+ L+ A G+ + + K ++ K + +Y IL+SY G++K + I
Sbjct: 528 YNALLNALARRGDWRTAESVIKDMKNKGFKPSETSYSLILNSYAKGGYVKGINRI 582
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY +L+ LYA KAEE+ ++ S + + YN ++ + G + + + E+
Sbjct: 667 TYNSLMDLYARGGECWKAEEILRELQNSGDKSDLISYNTVIKGFCRQGLMHEALRTLSEM 726
Query: 106 KRKNVVPDIFTYNLWISSCAAT---LNIDQVKKFLDEMSC 142
+ + P I TYN ++ AA ID+V ++ + C
Sbjct: 727 ISRGIRPCIVTYNTFVGGYAAKGMFAEIDEVLSYMTKHDC 766
Score = 37.4 bits (85), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 23/112 (20%), Positives = 50/112 (44%), Gaps = 2/112 (1%)
Query: 31 ERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTL 88
ER F+ L + + ++L +++ ++A E+ +++ L + + YN +M L
Sbjct: 615 ERAFQALQKHGYKPDLVVFNSMLSMFSRKNMHDRAHEIMHLIQECGLQPDLVTYNSLMDL 674
Query: 89 YMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
Y G+ K ++ E++ D+ +YN I + + + L EM
Sbjct: 675 YARGGECWKAEEILRELQNSGDKSDLISYNTVIKGFCRQGLMHEALRTLSEM 726
>gi|359496212|ref|XP_003635178.1| PREDICTED: pentatricopeptide repeat-containing protein At1g55890,
mitochondrial-like [Vitis vinifera]
Length = 379
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 105/240 (43%), Gaps = 2/240 (0%)
Query: 55 AGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDI 114
A AK E++ E +Q N + +MTLY + G + + +E+ + N +
Sbjct: 68 AKAKKLSFIEDILEHQEQYNEISTEVFAVRLMTLYGTAGMFDHAHKLFDELPKLNCERTV 127
Query: 115 FTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTL 174
++N +S+C + D++ F E+ + G D V Y LVN + L +A S L
Sbjct: 128 MSFNALLSACVNSKKFDKIDGFFQELPGNLGIVPDVVSYNILVNAFCEMGSLDSA-LSVL 186
Query: 175 VEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLML 234
E EK + IT++ L+ + G+ ++IW ++ R+Y L +
Sbjct: 187 DEMEKVGLEPDLITFNTLLNAFYQNGSYADGEKIWDLMKKNNVAPNVRSYNAKLRGVISE 246
Query: 235 GHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
+ E E+ID+ K S D+ N L+ F + G E+A ++ + + P A+
Sbjct: 247 NRMSEAVELIDEMKTSGIKP-DVFTLNSLMKGFCNAGNLEEAKRWYSEIARNELPPVRAT 305
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/174 (19%), Positives = 80/174 (45%), Gaps = 7/174 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+ LL+ + E++++ +K++N++ N YN + +S ++ + +++E+
Sbjct: 200 TFNTLLNAFYQNGSYADGEKIWDLMKKNNVAPNVRSYNAKLRGVISENRMSEAVELIDEM 259
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K + PD+FT N + N+++ K++ E++ + Y+ L+ +
Sbjct: 260 KTSGIKPDVFTLNSLMKGFCNAGNLEEAKRWYSEIARNE-LPPVRATYMTLIPFLVEKGD 318
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLI-ILYAGLGNKDKIDQIWKSLRMTKQK 218
A E K + R+W+ L+ + GL + KI++ + + + K K
Sbjct: 319 FEMA-----TELCKEVCSRRWLIEPALLQQVLEGLVKESKIEEATELVELEKLK 367
>gi|302801852|ref|XP_002982682.1| hypothetical protein SELMODRAFT_421991 [Selaginella moellendorffii]
gi|300149781|gb|EFJ16435.1| hypothetical protein SELMODRAFT_421991 [Selaginella moellendorffii]
Length = 414
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 125/298 (41%), Gaps = 50/298 (16%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M+ +K F + +SD+ ++L+ ++ + ++E +P ++ YTA+L ++A
Sbjct: 29 MIRNKVFEIEESDHVLLLELVGRISKFQATRCFWE-MPAELRSEAAYTAMLQVFARWHAI 87
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
AE+ +K NL YN M+ +Y + +KV + +E+ V PD TY +
Sbjct: 88 PAAEDTMSEMKSLNLITRVEPYNIMLDMYKRKNEDDKVRAMYDELSSLGVAPDAHTYLIV 147
Query: 121 ISSCAATLNID----QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVE 176
+ + D +V+KFLDE
Sbjct: 148 LRAKQKIGGFDGIEAEVRKFLDE------------------------------------- 170
Query: 177 AEKSITQRQWI-TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLG 235
+T RQ + Y+ ++ +Y L + I+ + L T +K +S +Y C+L +Y LG
Sbjct: 171 ---QLTSRQPLFIYECMLRIYTLLRDLTAIENLRSILLKTFKKFSSSSYNCLLDAYRQLG 227
Query: 236 HLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKN--CAPT 291
++ + ++ T +I + ++ ++ G EKANE + L + C P
Sbjct: 228 EVERAERLFNEIGNKFT--LNIQSYRAMIAVYASNGRMEKANELYKQLFRAGFECHPA 283
>gi|359496222|ref|XP_002263756.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g13150-like [Vitis vinifera]
Length = 379
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 107/246 (43%), Gaps = 3/246 (1%)
Query: 49 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 108
A+L L A AK E++ E KQ N + +MTLY G E + +E+ +
Sbjct: 63 AVLTL-AKAKKFSFIEDILEHQKQYNEISTEVFAVRLMTLYGKAGMFEHAHKLFDELPKL 121
Query: 109 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVN 168
N + ++N +S C + D++ F E+ + G D V Y +VN + L +
Sbjct: 122 NCERTVVSFNALLSVCVNSKKFDKIDGFFQELPGNLGVVPDVVSYNIIVNAFCEMGSLDS 181
Query: 169 AESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICIL 228
A S L E EK + IT++ L+ + G+ ++IW ++ R+Y L
Sbjct: 182 A-LSVLDEMEKVGLEPDLITFNTLLNAFYQNGSYADGEKIWDLMKKNNVAPNVRSYNAKL 240
Query: 229 SSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 288
+ + E E+ID+ K S D+ N L+ F + G E+A ++ + +
Sbjct: 241 RGVISENRMSEAVELIDEMKTSGIKP-DVFTLNSLMKGFCNAGNLEEAKRWYSEIARNEL 299
Query: 289 APTNAS 294
P A+
Sbjct: 300 PPVRAT 305
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 34/174 (19%), Positives = 80/174 (45%), Gaps = 7/174 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+ LL+ + E++++ +K++N++ N YN + +S ++ + +++E+
Sbjct: 200 TFNTLLNAFYQNGSYADGEKIWDLMKKNNVAPNVRSYNAKLRGVISENRMSEAVELIDEM 259
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K + PD+FT N + N+++ K++ E++ + Y+ L+ +
Sbjct: 260 KTSGIKPDVFTLNSLMKGFCNAGNLEEAKRWYSEIARNE-LPPVRATYMTLIPFLVEKGD 318
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLI-ILYAGLGNKDKIDQIWKSLRMTKQK 218
A E K + R+W+ L+ + GL + KI++ + + + K K
Sbjct: 319 FDMA-----TELCKEVCSRRWLIEPALLQQVLEGLVKESKIEEATELVELAKLK 367
>gi|147791423|emb|CAN76850.1| hypothetical protein VITISV_005998 [Vitis vinifera]
Length = 340
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 102/240 (42%), Gaps = 2/240 (0%)
Query: 55 AGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDI 114
A AK E++ E KQ N + +MTLY G E + +E + N +
Sbjct: 29 AKAKKFSFIEDILEHQKQYNEISTEVFAVRLMTLYGKAGMFEHAHKLFDEXPKLNCERTV 88
Query: 115 FTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTL 174
++N +S C + D++ F E+ + G D V Y +VN + L +A S L
Sbjct: 89 VSFNALLSVCVXSKKFDKIDGFFQELPGNLGVVPDVVSYNIIVNAFCEMGSLDSA-LSVL 147
Query: 175 VEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLML 234
E EK + IT++ L+ + G+ ++IW ++ R+Y L +
Sbjct: 148 DEMEKVGLEPDLITFNTLLNAFYQNGSYADGEKIWDLMKKNNVAPNVRSYNAKLRGVISE 207
Query: 235 GHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
+ E E+ID+ K S D+ N L+ F + G E+A ++ + + P A+
Sbjct: 208 NRMSEAVELIDEMKTSGIKP-DVFTLNSLMKGFCNAGNLEEAKRWYSEIARNELPPVRAT 266
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 34/174 (19%), Positives = 80/174 (45%), Gaps = 7/174 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+ LL+ + E++++ +K++N++ N YN + +S ++ + +++E+
Sbjct: 161 TFNTLLNAFYQNGSYADGEKIWDLMKKNNVAPNVRSYNAKLRGVISENRMSEAVELIDEM 220
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K + PD+FT N + N+++ K++ E++ + Y+ L+ +
Sbjct: 221 KTSGIKPDVFTLNSLMKGFCNAGNLEEAKRWYSEIARNE-LPPVRATYMTLIPFLVEKGD 279
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLI-ILYAGLGNKDKIDQIWKSLRMTKQK 218
A E K + R+W+ L+ + GL + KI++ + + + K K
Sbjct: 280 FDMA-----TELCKEVCSRRWLIEPALLQQVLEGLVKESKIEEATELVELAKLK 328
>gi|168004269|ref|XP_001754834.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693938|gb|EDQ80288.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 504
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 118/247 (47%), Gaps = 7/247 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+T ++++Y A +++KA++LF ++++ N Y +M + G + + E+
Sbjct: 199 TFTIMINIYGKAYYSDKADDLFRSMRKALCPPNLYTYTALMNAHAREGNCVRAEEIFAEL 258
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ +PD++TYN + + + + K+ M ++G D V Y L++ + A
Sbjct: 259 QSVGFIPDVYTYNALLEAYSRGEHPTGAKEVFQAM-VEAGVRPDQVSYNILIDAFGRAGL 317
Query: 166 LVNAES--STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 223
+A++ ++ EA T + ++ L+ YA G + +++ + + + K +
Sbjct: 318 TADAQAVYDSMKEAGFKPTMK---SHMLLLSSYAKAGKVTEAERLVREIENSGVKPDTFM 374
Query: 224 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 283
+ +LS+Y G + E+ +++ S+ + DIS N L+ A++ G EKA E L
Sbjct: 375 FNSLLSAYGNSGRIDEMESLLESM-VSSVAKPDISTLNTLINAYAQGGYIEKAEEVFNSL 433
Query: 284 LQKNCAP 290
K P
Sbjct: 434 ESKGLTP 440
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/281 (19%), Positives = 105/281 (37%), Gaps = 49/281 (17%)
Query: 34 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLS--------FNALM-YNE 84
F+ LP T ++ LL Y+ EKAE+LF +K+SN S F+ + YN
Sbjct: 112 FQCLP----TETSFNVLLAAYSRGVQLEKAEKLFHEMKESNYSPGTVEWMIFSGIATYNT 167
Query: 85 MMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS--- 141
+ + G++ + +++++ ++P + T+ + I+ D+ M
Sbjct: 168 YLEVLGKSGRLSQAEDTFRDMQKQGILPAVNTFTIMINIYGKAYYSDKADDLFRSMRKAL 227
Query: 142 CDS-------------------------------GGSDDWVKYVNLVNIYITASHLVNAE 170
C G D Y L+ Y H A+
Sbjct: 228 CPPNLYTYTALMNAHAREGNCVRAEEIFAELQSVGFIPDVYTYNALLEAYSRGEHPTGAK 287
Query: 171 SSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSS 230
E + Q ++Y+ LI + G ++ S++ K T ++++ +LSS
Sbjct: 288 EVFQAMVEAGVRPDQ-VSYNILIDAFGRAGLTADAQAVYDSMKEAGFKPTMKSHMLLLSS 346
Query: 231 YLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 271
Y G + E ++ + + S D N LL A+ + G
Sbjct: 347 YAKAGKVTEAERLVREIENSGVKP-DTFMFNSLLSAYGNSG 386
Score = 44.3 bits (103), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T L++ YA + EKAEE+F ++ L+ + + + +M Y K + +++
Sbjct: 409 TLNTLINAYAQGGYIEKAEEVFNSLESKGLTPDVMSWTSLMGAYAQRKLFRKCVSIFQKM 468
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLD 138
+ +PD T +++SSC + +QVK+ D
Sbjct: 469 VKAGCIPDRATAKVFLSSCRSP---EQVKEVTD 498
Score = 40.8 bits (94), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 96/257 (37%), Gaps = 12/257 (4%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
+ L+ Y +K +AE+ F +K +N ++ Y Q+EK + E+K
Sbjct: 86 FNMLIDAYGKSKQWREAEKTFHLMKDFQCLPTETSFNVLLAAYSRGVQLEKAEKLFHEMK 145
Query: 107 RKNVVP---------DIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 157
N P I TYN ++ + + Q + +M G + ++
Sbjct: 146 ESNYSPGTVEWMIFSGIATYNTYLEVLGKSGRLSQAEDTFRDMQ-KQGILPAVNTFTIMI 204
Query: 158 NIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 217
NIY A + A+ K++ TY L+ +A GN + ++I+ L+
Sbjct: 205 NIYGKAYYSDKAD-DLFRSMRKALCPPNLYTYTALMNAHAREGNCVRAEEIFAELQSVGF 263
Query: 218 KMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 277
Y +L +Y H E+ ++ +S N L+ AF GLT A
Sbjct: 264 IPDVYTYNALLEAYSRGEHPTGAKEVFQAMVEAGVRPDQVS-YNILIDAFGRAGLTADAQ 322
Query: 278 EFHMLLLQKNCAPTNAS 294
+ + + PT S
Sbjct: 323 AVYDSMKEAGFKPTMKS 339
>gi|125557709|gb|EAZ03245.1| hypothetical protein OsI_25393 [Oryza sativa Indica Group]
Length = 610
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 124/278 (44%), Gaps = 8/278 (2%)
Query: 13 DYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQ 72
DYA +DL+ + GI + ++Y + +PL + Y L+ A +KAEE+F+ +K
Sbjct: 214 DYACHLDLIARSHGIETAQKYIKRVPLPFRNEVLYETLIVNCVLAGDIQKAEEVFKEIKD 273
Query: 73 SNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQ 132
L + N+M+ LY + KVA V+ ++++NV P FTY L I + ++
Sbjct: 274 LCLRLTVTLCNQMILLYKRIAP-GKVASVLMLMEKENVKPSAFTYRLLIDLKGRSNDLAG 332
Query: 133 VKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTL-VEAEKSITQRQWITYDF 191
++ ++EM G + YI AE+ +EA+ S ++
Sbjct: 333 IEVVINEMKA-YGIEPSTSTQTMVARFYIHGGLTEKAEAVVKEMEAQLSNSKDGRHVIKS 391
Query: 192 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 251
L+ LYA L + + +IW+ M + M +++ + ++ LG +++ E + +A
Sbjct: 392 LLHLYAALNKPNDVARIWE---MCTEPMLE-DFLSAIKAWGELGLIEKAEETFEAM-ANA 446
Query: 252 TSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCA 289
N +L ++ L K +F + + C
Sbjct: 447 PEKLSSKYYNAMLNVYAQNKLLSKGKQFVERMCRDGCP 484
Score = 44.3 bits (103), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 74/157 (47%), Gaps = 9/157 (5%)
Query: 13 DYATRIDLMTKVFGIHSGERYFEGLPLSAK--TSETYTALLHLYAGAKWTEKAEELFERV 70
D+ + I ++ I E FE + + + +S+ Y A+L++YA K K ++ ER+
Sbjct: 419 DFLSAIKAWGELGLIEKAEETFEAMANAPEKLSSKYYNAMLNVYAQNKLLSKGKQFVERM 478
Query: 71 KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPD---IFT-YNLWISSCAA 126
+ L ++ ++ LY++ G+VEK + + +N PD +FT Y + A
Sbjct: 479 CRDGCPNGPLTWDALINLYVNSGEVEKADSFLLNVAEEN--PDRKPLFTSYFFLMKGYAK 536
Query: 127 TLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
+I +K D + + G + + Y L+ Y+ A
Sbjct: 537 RGDIHNTEKIFDRLK-NVGYAPRPLHYAVLLEAYVNA 572
Score = 40.8 bits (94), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 83/188 (44%), Gaps = 12/188 (6%)
Query: 49 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 108
+LLHLYA ++E + M + ++ + G++ + E +
Sbjct: 391 SLLHLYAALNKPNDVARIWEMCTEP-------MLEDFLSAIKAWGELGLIEKAEETFEAM 443
Query: 109 NVVPDIFT---YNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
P+ + YN ++ A + + K+F++ M C G + + + L+N+Y+ +
Sbjct: 444 ANAPEKLSSKYYNAMLNVYAQNKLLSKGKQFVERM-CRDGCPNGPLTWDALINLYVNSGE 502
Query: 166 LVNAESSTLVEAEKSITQRQWIT-YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
+ A+S L AE++ ++ T Y FL+ YA G+ ++I+ L+ +Y
Sbjct: 503 VEKADSFLLNVAEENPDRKPLFTSYFFLMKGYAKRGDIHNTEKIFDRLKNVGYAPRPLHY 562
Query: 225 ICILSSYL 232
+L +Y+
Sbjct: 563 AVLLEAYV 570
>gi|147812055|emb|CAN60032.1| hypothetical protein VITISV_006384 [Vitis vinifera]
Length = 42
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 39/42 (92%)
Query: 214 MTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDF 255
MTKQK+ SR+Y+CILSSY+MLGH+K+VG +ID+WK+S T+DF
Sbjct: 1 MTKQKIKSRSYVCILSSYVMLGHIKDVGIVIDEWKKSTTTDF 42
>gi|242078281|ref|XP_002443909.1| hypothetical protein SORBIDRAFT_07g004200 [Sorghum bicolor]
gi|241940259|gb|EES13404.1| hypothetical protein SORBIDRAFT_07g004200 [Sorghum bicolor]
Length = 521
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/295 (21%), Positives = 131/295 (44%), Gaps = 14/295 (4%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
+V + + LS+ DY+ ++ KV GI E F +P + Y L+
Sbjct: 110 IVRERPYKLSELDYSYLLEFTAKVHGISEAESLFLRVPQEYQKELLYNNLVMAALDLDLI 169
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
+ + ++++ +L + +YN ++ L+ S + + ++ ++ ++K V P TYN+
Sbjct: 170 KHSYAYMRKMRELSLPISPYVYNRLIILHSSPSRRKTISKILYQMKADRVTPHTSTYNIL 229
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA-EK 179
+ A NID + + +M ++ + ++ + + V T VEA E
Sbjct: 230 LKIQANEHNIDGLARVFSDMKRAKIEPNEITYGILAISHAVARLYTV---CHTYVEAIEN 286
Query: 180 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 239
S+T W T + L+ILY LG + ++ + W+ ++ + S+++ + ++ +G + +
Sbjct: 287 SMTGTNWSTLEILLILYGYLGKEKELKRTWEIMQDLPH-VRSKSFTVAIEAFGKVGSIDQ 345
Query: 240 VGEIIDQWKQ----SATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
+I Q K S T F N +L + G+ +KA+ + C P
Sbjct: 346 AEKIWVQIKSTKKLSLTEQF-----NSILSVYCRHGVVDKASSVFKEMRANGCQP 395
>gi|387219245|gb|AFJ69331.1| putative udp-glucosyltransferase, partial [Nannochloropsis gaditana
CCMP526]
Length = 521
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 108/256 (42%), Gaps = 14/256 (5%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQS-----------NLSFNALMYNEMMTLYMSVGQ 94
TYT L+H YAG TE AE + R+ + + N + Y +MT Y + G
Sbjct: 230 TYTTLMHAYAGRGDTEGAEAVLRRMLEGEGGRVREEEVLRVLPNVMTYTTLMTAYAAGGD 289
Query: 95 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 154
VE V+E ++ + P++ TY + +++ ++ + L M + + + Y
Sbjct: 290 VEGSEAVLERMEEACIAPNVMTYTVLMTAYTLRGDVKGAEGVLRRM-ISAYVAPNANTYT 348
Query: 155 NLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM 214
L++ Y + AE L E + +T+ L+ +YA G + + +
Sbjct: 349 TLLHAYTVNGNAAGAE-EVLARMEAAGVLPTALTFATLMTVYAARGEVESAKGVLARMEA 407
Query: 215 TKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTE 274
T+ + +L++Y++ G + +++ + + A DF ++ N L+ ++D G
Sbjct: 408 AGVGPTAMAFDTLLNAYVVAGDVGGAEQVLRRREAEAYPDFPLT-YNTLMNGYADKGDVA 466
Query: 275 KANEFHMLLLQKNCAP 290
A + K P
Sbjct: 467 GAEGVLARMRAKGVGP 482
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 59/131 (45%), Gaps = 1/131 (0%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
A + TYT LLH Y AEE+ R++ + + AL + +MT+Y + G+VE
Sbjct: 341 APNANTYTTLLHAYTVNGNAAGAEEVLARMEAAGVLPTALTFATLMTVYAARGEVESAKG 400
Query: 101 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
V+ ++ V P ++ +++ ++ ++ L ++ D + Y L+N Y
Sbjct: 401 VLARMEAAGVGPTAMAFDTLLNAYVVAGDVGGAEQVLRRREAEA-YPDFPLTYNTLMNGY 459
Query: 161 ITASHLVNAES 171
+ AE
Sbjct: 460 ADKGDVAGAEG 470
>gi|422294672|gb|EKU21972.1| putative udp-glucosyltransferase, partial [Nannochloropsis gaditana
CCMP526]
Length = 535
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 108/256 (42%), Gaps = 14/256 (5%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQS-----------NLSFNALMYNEMMTLYMSVGQ 94
TYT L+H YAG TE AE + R+ + + N + Y +MT Y + G
Sbjct: 244 TYTTLMHAYAGRGDTEGAEAVLRRMLEGEGGRVREEEVLRVLPNVMTYTTLMTAYAAGGD 303
Query: 95 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 154
VE V+E ++ + P++ TY + +++ ++ + L M + + + Y
Sbjct: 304 VEGSEAVLERMEEACIAPNVMTYTVLMTAYTLRGDVKGAEGVLRRM-ISAYVAPNANTYT 362
Query: 155 NLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM 214
L++ Y + AE L E + +T+ L+ +YA G + + +
Sbjct: 363 TLLHAYTVNGNAAGAE-EVLARMEAAGVLPTALTFATLMTVYAARGEVESAKGVLARMEA 421
Query: 215 TKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTE 274
T+ + +L++Y++ G + +++ + + A DF ++ N L+ ++D G
Sbjct: 422 AGVGPTAMAFDTLLNAYVVAGDVGGAEQVLRRREAEAYPDFPLT-YNTLMNGYADKGDVA 480
Query: 275 KANEFHMLLLQKNCAP 290
A + K P
Sbjct: 481 GAEGVLARMRAKGVGP 496
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 59/131 (45%), Gaps = 1/131 (0%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
A + TYT LLH Y AEE+ R++ + + AL + +MT+Y + G+VE
Sbjct: 355 APNANTYTTLLHAYTVNGNAAGAEEVLARMEAAGVLPTALTFATLMTVYAARGEVESAKG 414
Query: 101 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
V+ ++ V P ++ +++ ++ ++ L ++ D + Y L+N Y
Sbjct: 415 VLARMEAAGVGPTAMAFDTLLNAYVVAGDVGGAEQVLRRREAEA-YPDFPLTYNTLMNGY 473
Query: 161 ITASHLVNAES 171
+ AE
Sbjct: 474 ADKGDVAGAEG 484
>gi|302801860|ref|XP_002982686.1| hypothetical protein SELMODRAFT_53462 [Selaginella moellendorffii]
gi|300149785|gb|EFJ16439.1| hypothetical protein SELMODRAFT_53462 [Selaginella moellendorffii]
Length = 463
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 119/255 (46%), Gaps = 5/255 (1%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYF-EGLP-LSAKTSETYTALLHLYAGAK 58
++ + L + ++L +V +++ + + +P + AK+ + Y
Sbjct: 63 VIKERSLELQKFHFINHLELTGRVVNMNAAKNFLLTKMPRVYAKSEAALITMFENYVIHS 122
Query: 59 WTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYN 118
KA + + +K+ NL A +N++ LY + + + + +++ E++ + P++ TYN
Sbjct: 123 LLSKARLVLKLMKEKNLLTTATAFNKLFHLYANKKKEDGIPVILREMRDMRISPNVETYN 182
Query: 119 LWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAE 178
+ I A + + +++ +M CD G+ + L + Y+ A A + L EA
Sbjct: 183 ILIGIKAKKGDTEGMERLFSKMKCDGDGTPNGEILCTLASGYVNAGDHEKA-MAYLKEAV 241
Query: 179 KSITQRQ-WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHL 237
S R+ +D +I LYA +G D ID+IW+ R +++ +Y+ +++Y +G +
Sbjct: 242 ASDEFRESRRVHDKVIALYAAMGRADMIDRIWRFTRRFPV-VSANSYVATIAAYEKVGRI 300
Query: 238 KEVGEIIDQWKQSAT 252
++ + + T
Sbjct: 301 DRAEKVFAELTEKRT 315
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 66/164 (40%), Gaps = 3/164 (1%)
Query: 3 THKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGL--PLSAKTSETYTALLHLYAGAKWT 60
T + V+S + Y I KV I E+ F L + Y L Y
Sbjct: 276 TRRFPVVSANSYVATIAAYEKVGRIDRAEKVFAELTEKRTLLRPAHYVPLFRAYCEGGEM 335
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
KAE+L ER++ N N L Y+ ++ YM G + A + + + V P T L
Sbjct: 336 GKAEKLLERIRHGNGHINNLSYHHLVAGYMKSGNPKMAAETLTRMFEERVPPCFDTVMLI 395
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+ A +++ + +M +S + + Y +L+ Y+ A
Sbjct: 396 LKEHAKNADVNSAELLFQDMRRES-YNKNVAAYNSLLEAYVNAG 438
>gi|357481229|ref|XP_003610900.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512235|gb|AES93858.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1508
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 91/198 (45%), Gaps = 2/198 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY A++ +Y + KAE LFE++K + S +A+ YN ++ + G EKV + EE+
Sbjct: 373 TYNAMISVYGRCGFALKAEHLFEKLKSNGFSPDAVTYNSLLYAFSKEGNTEKVRDISEEM 432
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ D TYN I D+ + +M SG + D V Y L+++ AS
Sbjct: 433 VKMGFGKDEMTYNTIIHMYGKHGRHDEALRLYRDMK-SSGRNPDAVTYTVLIDLLGKASK 491
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ A S + E + + TY LI YA +G + + ++ + +R + K Y
Sbjct: 492 IEEA-SKVMSEMLDAGVKPTLHTYSALICAYAKVGRRVEAEETFNRMRESGIKADHLAYS 550
Query: 226 CILSSYLMLGHLKEVGEI 243
+L +L +K+ +
Sbjct: 551 VMLDFFLRFNEIKKAAAL 568
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 82/171 (47%), Gaps = 6/171 (3%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYM-SVGQVEKVA 99
A T + Y A++ +YA EK E+F +++ + + +N ++ + S V +A
Sbjct: 261 ADTVQVYNAMMGVYARNGNFEKVNEMFNLMRERGCEPDIVSFNTLINAKVKSCATVSGLA 320
Query: 100 L-VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 158
+ +++E+ + + PDI TYN IS+C+ N+ + M + D W Y +++
Sbjct: 321 IELLDEVGKFGLRPDIITYNTLISACSRESNLKEAIGVFSHMESNRCQPDLWT-YNAMIS 379
Query: 159 IYITASHLVNAESSTLVEAEKSIT-QRQWITYDFLIILYAGLGNKDKIDQI 208
+Y + AE L E KS +TY+ L+ ++ GN +K+ I
Sbjct: 380 VYGRCGFALKAEH--LFEKLKSNGFSPDAVTYNSLLYAFSKEGNTEKVRDI 428
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 107/243 (44%), Gaps = 17/243 (6%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
+ + ++L LY+ + + +++ ++ + L+ + YN ++T+Y + E+ ++ +
Sbjct: 965 QIFNSVLKLYSSIEEFQNMGVIYQMIQDAGLAPDEETYNTLITMYCRDHRPEEGLSLMHK 1024
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+K + P TY I++ + DQ ++ +E+ + G D Y ++ +Y T+
Sbjct: 1025 MKSLGLEPKRDTYRSMIAAFSKQQLYDQAEELFEELRSN-GYKLDRSFYHLMMKMYRTSG 1083
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
AE+ + E I + T L++ Y G ++ D+I K+LR + + Y
Sbjct: 1084 DHQKAENLLEIMKEAGI-EPNTATMHLLMVSYGKSGQPEEADRILKNLRTMGAVLDTLPY 1142
Query: 225 ICILSSYLMLGHLKEVGEIIDQWKQSAT-SDFDISAC--------------NRLLGAFSD 269
++ +YL G K E + + K++A D I C N LL A
Sbjct: 1143 SSVIDAYLKKGDAKAGIEKLTEMKEAAIEPDHRIWTCFIRAASLSGEVNDANNLLNALQA 1202
Query: 270 VGL 272
VG
Sbjct: 1203 VGF 1205
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 2/112 (1%)
Query: 14 YATRIDLMTKVFGIHSGERYF-EGLPLSAK-TSETYTALLHLYAGAKWTEKAEELFERVK 71
Y IDL+ K I + E L K T TY+AL+ YA +AEE F R++
Sbjct: 479 YTVLIDLLGKASKIEEASKVMSEMLDAGVKPTLHTYSALICAYAKVGRRVEAEETFNRMR 538
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 123
+S + + L Y+ M+ ++ +++K A + +E+ PD Y + + +
Sbjct: 539 ESGIKADHLAYSVMLDFFLRFNEIKKAAALYQEMIEAGFTPDTGLYEVMLPA 590
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 91/210 (43%), Gaps = 10/210 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L+ + ++A +F ++ + + YN M+++Y G K + E++
Sbjct: 338 TYNTLISACSRESNLKEAIGVFSHMESNRCQPDLWTYNAMISVYGRCGFALKAEHLFEKL 397
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K PD TYN + + + N ++V+ +EM G D + Y ++++Y H
Sbjct: 398 KSNGFSPDAVTYNSLLYAFSKEGNTEKVRDISEEM-VKMGFGKDEMTYNTIIHMY--GKH 454
Query: 166 LVNAESSTLVEAEKSITQRQ-WITYDFLIILYAGLGNKDKIDQIWKSLRM---TKQKMTS 221
+ E+ L KS + +TY LI L LG KI++ K + K T
Sbjct: 455 GRHDEALRLYRDMKSSGRNPDAVTYTVLIDL---LGKASKIEEASKVMSEMLDAGVKPTL 511
Query: 222 RNYICILSSYLMLGHLKEVGEIIDQWKQSA 251
Y ++ +Y +G E E ++ ++S
Sbjct: 512 HTYSALICAYAKVGRRVEAEETFNRMRESG 541
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 61/129 (47%), Gaps = 1/129 (0%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
K TY ++H+Y ++A L+ +K S + +A+ Y ++ L ++E+ +
Sbjct: 438 GKDEMTYNTIIHMYGKHGRHDEALRLYRDMKSSGRNPDAVTYTVLIDLLGKASKIEEASK 497
Query: 101 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
V+ E+ V P + TY+ I + A + ++ + M +SG D + Y +++ +
Sbjct: 498 VMSEMLDAGVKPTLHTYSALICAYAKVGRRVEAEETFNRMR-ESGIKADHLAYSVMLDFF 556
Query: 161 ITASHLVNA 169
+ + + A
Sbjct: 557 LRFNEIKKA 565
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/292 (20%), Positives = 129/292 (44%), Gaps = 36/292 (12%)
Query: 33 YFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSV 92
+F G + T+ TY L+H + ++A +L + + Q + +A +YN ++ +
Sbjct: 81 HFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKM 140
Query: 93 GQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVK 152
G+++ V++ + ++ VPD+ TY I C T +D+ +K +++M +SG + D V
Sbjct: 141 GKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMK-ESGLTPDTVA 199
Query: 153 YVNLVNIYITASHL--VNAESSTLVEA-----------------------------EKSI 181
Y L+N + L V+ +VEA EK I
Sbjct: 200 YNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMI 259
Query: 182 TQR---QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLK 238
++ +TY+ L+ + + D+ +++ + + + T Y ++ + L
Sbjct: 260 EKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLA 319
Query: 239 EVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
+ +++ ++ S D+ N LL G E+A+E ++++K+CAP
Sbjct: 320 DAYRVMEDMFKAGISP-DLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAP 370
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/269 (17%), Positives = 114/269 (42%), Gaps = 11/269 (4%)
Query: 27 IHSGERYFEGLPLSAKTSET--YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNE 84
+ + E + S T +T Y ALL+ E+ +L E + ++ + YN
Sbjct: 178 LDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNT 237
Query: 85 MMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS 144
++ G+ E+ ++E++ K PD+ TYN + +D+ ++ L++M
Sbjct: 238 VVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMV-GR 296
Query: 145 GGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDK 204
+ + Y L+ + A L +A + + K+ +TY+ L+ GL K
Sbjct: 297 RCAPTVITYTTLIGGFSRADRLADA-YRVMEDMFKAGISPDLVTYNCLL---DGLCKAGK 352
Query: 205 IDQIWKSLRMTKQKMTSRN---YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 261
+++ + L + +K + + Y +++ LG + + +++ + ++ N
Sbjct: 353 LEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQP-NLVTFN 411
Query: 262 RLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
++ F G ++ ++ L+ + +C P
Sbjct: 412 TMIDGFCKAGKVDEGHKVLELMKEVSCTP 440
>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
Length = 814
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 104/234 (44%), Gaps = 3/234 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY++++H A+ +KAE ++ + N YN ++ Y S GQ ++ V +E+
Sbjct: 256 TYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM 315
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+R++++PD+ T+N+ + S I + + D M+ G + D Y ++N Y T
Sbjct: 316 RRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAM-KGQNPDVFSYNIMLNGYATKGC 374
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
LV+ + I T++ LI YA G DK I+ +R K Y
Sbjct: 375 LVDMTDLFDLMLGDGIAP-VICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYT 433
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 279
++++ +G + + E +Q + D A + L+ F G KA E
Sbjct: 434 TVIAALCRIGKMDDAMEKFNQMIDQGVAP-DKYAYHCLIQGFCTHGSLLKAKEL 486
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 55/294 (18%), Positives = 108/294 (36%), Gaps = 39/294 (13%)
Query: 35 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 94
+G + + TS TY L+ A E A F ++ ++ L + ++ N ++ + +
Sbjct: 102 QGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKR 161
Query: 95 V-EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM------------- 140
E + +++ VPD+F+Y++ + S Q L M
Sbjct: 162 TDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVA 221
Query: 141 ----------------SCD-------SGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA 177
+CD G D+V Y ++V+ A + AE+
Sbjct: 222 YNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMV 281
Query: 178 EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHL 237
K + W TY+ LI Y+ G + +++K +R + ++ S G +
Sbjct: 282 NKGVLPNNW-TYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKI 340
Query: 238 KEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 291
KE ++ D + D+ + N +L ++ G + L+L AP
Sbjct: 341 KEARDVFDTMAMKGQNP-DVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPV 393
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/233 (19%), Positives = 99/233 (42%), Gaps = 5/233 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSN--LSFNALMYNEMMTLYMSVGQVEKVALVVE 103
+Y+ LL + +A++L + + S + + YN ++ + G V K + +
Sbjct: 184 SYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFK 243
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
E+ ++ + PD TY+ + + +D+ + FL +M ++W Y NL+ Y +
Sbjct: 244 EMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWT-YNNLIYGYSST 302
Query: 164 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 223
A E + +T++ L+ G + ++ ++ M Q +
Sbjct: 303 GQWKEA-VRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFS 361
Query: 224 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
Y +L+ Y G L ++ ++ D + I N L+ A+++ G+ +KA
Sbjct: 362 YNIMLNGYATKGCLVDMTDLFDLMLGDGIAPV-ICTFNVLIKAYANCGMLDKA 413
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 42/228 (18%), Positives = 99/228 (43%), Gaps = 11/228 (4%)
Query: 14 YATRIDL--MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVK 71
YAT+ L MT +F + G+ G+ A T+ L+ YA +KA +F ++
Sbjct: 369 YATKGCLVDMTDLFDLMLGD----GI---APVICTFNVLIKAYANCGMLDKAMIIFNEMR 421
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
+ N L Y ++ +G+++ ++ + V PD + Y+ I ++
Sbjct: 422 DHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLL 481
Query: 132 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 191
+ K+ + E+ ++G D V + +++N +++A++ + + + Y
Sbjct: 482 KAKELISEIM-NNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGL-HPTAVVYSM 539
Query: 192 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 239
L+ Y +G +K +++ ++ + Y +++ Y +G + E
Sbjct: 540 LMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDE 587
>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 788
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 109/268 (40%), Gaps = 42/268 (15%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY AL+ Y + +A ELF R+ + L + L YN ++ Y V++ ++ +E+
Sbjct: 302 TYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKEL 361
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
KN+VP I +YN I + I VKK LDEM S D V Y L++
Sbjct: 362 CNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMH-GSAQPPDVVTYNILIDALCKEGR 420
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK--------- 216
++ A LV K + +TY+ ++ Y N + I+ RM K
Sbjct: 421 ILEA-LGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFN--RMVKSGLEPDILN 477
Query: 217 ---------------------QKMTSRNYICILSSY-------LMLGHLKEVGEIIDQWK 248
++M +N I ++SY LG + V E++D+
Sbjct: 478 YNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMC 537
Query: 249 QSATSDFDISACNRLLGAFSDVGLTEKA 276
S S D+ N LL AF +KA
Sbjct: 538 DSGQSP-DVITYNILLDAFCKTQPFDKA 564
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 105/244 (43%), Gaps = 3/244 (1%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y+AL+ + A L ++ + + +A+ YN ++ SVG+ ++V ++ ++
Sbjct: 198 YSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMV 257
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
R+NV PD +T+N+ I + I + + L MS G D V Y L+ Y + +
Sbjct: 258 RENVDPDDYTFNILIDALCKEGRILEAQGVLAMMS-KRGEKPDIVTYNALMEGYCSREN- 315
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 226
V+ K + + Y+ LI Y D+ ++K L T +Y
Sbjct: 316 VHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNS 375
Query: 227 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 286
++ G + V +++D+ SA D+ N L+ A G +A +++++K
Sbjct: 376 LIDGLCNSGRISHVKKLLDEMHGSAQPP-DVVTYNILIDALCKEGRILEALGVLVMMMKK 434
Query: 287 NCAP 290
P
Sbjct: 435 GVKP 438
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 38/188 (20%), Positives = 82/188 (43%), Gaps = 6/188 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L++ + + A L + +++S++ N +MY+ ++ G V + +I
Sbjct: 162 TYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQI 221
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ ++ D TYN I C + +V + L +M ++ DD+ + L++
Sbjct: 222 GERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNI-LIDALCKEGR 280
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR--N 223
++ A+ L K + +TY+ L+ Y N + +++ RM K+ + N
Sbjct: 281 ILEAQ-GVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFN--RMVKRGLEPDVLN 337
Query: 224 YICILSSY 231
Y ++ Y
Sbjct: 338 YNVLIDGY 345
>gi|297834428|ref|XP_002885096.1| hypothetical protein ARALYDRAFT_479008 [Arabidopsis lyrata subsp.
lyrata]
gi|297330936|gb|EFH61355.1| hypothetical protein ARALYDRAFT_479008 [Arabidopsis lyrata subsp.
lyrata]
Length = 605
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 100/204 (49%), Gaps = 5/204 (2%)
Query: 6 EFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEE 65
+F ++++YA+++DL+ KV + E + + +P S + Y LL KAE+
Sbjct: 199 QFEFTEANYASQLDLVAKVHSLQKAENFLKDIPESFRGEVVYRTLLANCVLKHHVNKAED 258
Query: 66 LFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCA 125
LF ++K+ + N+++ LY S+ +K++ V+ ++R+N+ P TY I+S
Sbjct: 259 LFNKMKELKFPTSVFACNQLLLLY-SMHDRKKISDVLLLMERENIKPSRGTYQFLINSKG 317
Query: 126 ATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAE-KSITQR 184
+I ++K ++ M + G D L YI A L + E E K + Q
Sbjct: 318 LAGDITGMEKIVETMK-EEGIEVDPELQATLAKYYIRAG-LKERAQDLMKEIEGKGLQQT 375
Query: 185 QWITYDFLIILYAGLGNKDKIDQI 208
W+ L+ LYA +G+ D + ++
Sbjct: 376 PWVCRS-LLPLYADIGDSDNVRRL 398
>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
Length = 695
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 109/268 (40%), Gaps = 42/268 (15%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY AL+ Y + +A ELF R+ + L + L YN ++ Y V++ ++ +E+
Sbjct: 302 TYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKEL 361
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
KN+VP I +YN I + I VKK LDEM S D V Y L++
Sbjct: 362 CNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMH-GSAQPPDVVTYNILIDALCKEGR 420
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK--------- 216
++ A LV K + +TY+ ++ Y N + I+ RM K
Sbjct: 421 ILEA-LGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFN--RMVKSGLEPDILN 477
Query: 217 ---------------------QKMTSRNYICILSSY-------LMLGHLKEVGEIIDQWK 248
++M +N I ++SY LG + V E++D+
Sbjct: 478 YNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMC 537
Query: 249 QSATSDFDISACNRLLGAFSDVGLTEKA 276
S S D+ N LL AF +KA
Sbjct: 538 DSGQSP-DVITYNILLDAFCKTQPFDKA 564
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 105/244 (43%), Gaps = 3/244 (1%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y+AL+ + A L ++ + + +A+ YN ++ SVG+ ++V ++ ++
Sbjct: 198 YSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMV 257
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
R+NV PD +T+N+ I + I + + L MS G D V Y L+ Y + +
Sbjct: 258 RENVDPDDYTFNILIDALCKEGRILEAQGVLAMMS-KRGEKPDIVTYNALMEGYCSREN- 315
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 226
V+ K + + Y+ LI Y D+ ++K L T +Y
Sbjct: 316 VHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNS 375
Query: 227 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 286
++ G + V +++D+ SA D+ N L+ A G +A +++++K
Sbjct: 376 LIDGLCNSGRISHVKKLLDEMHGSAQPP-DVVTYNILIDALCKEGRILEALGVLVMMMKK 434
Query: 287 NCAP 290
P
Sbjct: 435 GVKP 438
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 38/188 (20%), Positives = 82/188 (43%), Gaps = 6/188 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L++ + + A L + +++S++ N +MY+ ++ G V + +I
Sbjct: 162 TYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQI 221
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ ++ D TYN I C + +V + L +M ++ DD+ + L++
Sbjct: 222 GERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNI-LIDALCKEGR 280
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR--N 223
++ A+ L K + +TY+ L+ Y N + +++ RM K+ + N
Sbjct: 281 ILEAQ-GVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFN--RMVKRGLEPDVLN 337
Query: 224 YICILSSY 231
Y ++ Y
Sbjct: 338 YNVLIDGY 345
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 109/250 (43%), Gaps = 12/250 (4%)
Query: 46 TYTALLH-LYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
TY+ ++ L K TE E LF ++ + S N + YN ++ +E+ ++EE
Sbjct: 115 TYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEE 174
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+ K VPD TYN +S + + K+F D M G S D V Y L++
Sbjct: 175 MASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMP-SRGYSPDVVAYNGLLDALYK-- 231
Query: 165 HLVNAESSTLVEAEKSITQRQW----ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 220
++ ++ K + + + +TY+ +++ A N D+ ++++K + +
Sbjct: 232 ---EGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPN 288
Query: 221 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 280
Y +LS + + + +++++ + D+ N LL L +KA+E
Sbjct: 289 GATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVP-DVVTYNILLDGLCKTNLVDKAHELF 347
Query: 281 MLLLQKNCAP 290
++ CAP
Sbjct: 348 STMVDNGCAP 357
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 62/135 (45%), Gaps = 1/135 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY LL +KA ELF + + + + + Y+ ++ +V ++ + +
Sbjct: 326 TYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRM 385
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ +VPD+ T+N+ + +D+ K LD+M+C SG + D+V Y L+N
Sbjct: 386 IERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTC-SGCAPDYVAYNTLMNGLRKQGR 444
Query: 166 LVNAESSTLVEAEKS 180
+ A+ T EK
Sbjct: 445 HIQADRLTQAMKEKG 459
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 105/252 (41%), Gaps = 16/252 (6%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+ +L + +LFE++ + +S + + YN ++ Y G+V++ + EE+
Sbjct: 10 TFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEM 69
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ P I+TYN +++ + + + M+ + G D V Y +++
Sbjct: 70 VSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMA-EKGFEPDVVTYSTIISGLCKTGK 128
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ A + + + Y+ LI GL + I++ +K L ++M S+ Y+
Sbjct: 129 VTEALEMLFHKMIERGCSANTVAYNALI---NGLCKDENIERAYKLL----EEMASKGYV 181
Query: 226 -------CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 278
ILS +G + E + D S D+ A N LL A G T++A +
Sbjct: 182 PDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSP-DVVAYNGLLDALYKEGKTDEAMK 240
Query: 279 FHMLLLQKNCAP 290
++ K P
Sbjct: 241 LFKDVIAKGYMP 252
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/251 (19%), Positives = 112/251 (44%), Gaps = 11/251 (4%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
S TY +++ + + + A L E + + + N YN ++ + +VE ++E
Sbjct: 230 SVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLE 289
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
++ + PD+ +Y I+ +D+ + +D+M G + + Y LV+ +
Sbjct: 290 QMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMI-QRGCQPNVITYGTLVDGFCRV 348
Query: 164 SHLVNAESSTLVEAEKSITQRQW----ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 219
L A VE + +T+R + ITY+ ++ ++ + ++ Q+ + + T
Sbjct: 349 GDLDGA-----VELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPP 403
Query: 220 TSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 279
+ NY I+S + G L+E ++++Q + D++ + L+ A + A E
Sbjct: 404 DAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRP-DVACLSTLIDALCKAAAIDSAQEL 462
Query: 280 HMLLLQKNCAP 290
+ + +CAP
Sbjct: 463 LRMSIGMDCAP 473
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 121/285 (42%), Gaps = 8/285 (2%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVK 71
Y T I + K +H G E + + + T+ ++ + A ELF ++
Sbjct: 1126 YNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQ 1185
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK-NVVPDIFTYNLWISSCAATLNI 130
+S + N + YN ++ + ++ ++ E+ RK PDI TYN I + +
Sbjct: 1186 ESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRV 1245
Query: 131 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 190
D+ K +M D DD V Y ++V + ++ ++ L K+ ITY
Sbjct: 1246 DRAYKLFLQMLSDGLAPDD-VTY-SIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYG 1303
Query: 191 FLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYL-MLGHLKEVGEIIDQWKQ 249
LI + GN DK +I + L ++K I +L G L++ GE+++ +
Sbjct: 1304 TLIDGFCKTGNLDKALEILQ-LLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLR 1362
Query: 250 SATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
+ D N LL F D LTE A + ++ Q C P NA+
Sbjct: 1363 AGLVP-DTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNAT 1406
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 107/250 (42%), Gaps = 12/250 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY +LL ++ E+A +L + Q N + YN ++ +V + L++E++
Sbjct: 1090 TYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQM 1149
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
N VPDI T+N I + T +D + + + +SG + + V Y +LV+ +
Sbjct: 1150 LSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQ-ESGCTPNLVTYNSLVHGLCKSRR 1208
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK-SLRMTKQKMTSRN- 223
AE K ITY+ +I GL ++D+ +K L+M + +
Sbjct: 1209 FDQAEYLLREMTRKQGCSPDIITYNTVI---DGLCKSKRVDRAYKLFLQMLSDGLAPDDV 1265
Query: 224 -YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC--NRLLGAFSDVGLTEKANEFH 280
Y ++SS + E +++ ++ FD A L+ F G +KA E
Sbjct: 1266 TYSIVISSLCKWRFMDEANNVLELMLKNG---FDPGAITYGTLIDGFCKTGNLDKALEIL 1322
Query: 281 MLLLQKNCAP 290
LLL K P
Sbjct: 1323 QLLLSKGSYP 1332
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 110/251 (43%), Gaps = 16/251 (6%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY+ L+ + A A ELF+ + + L +A ++ ++ GQ L E+
Sbjct: 163 TYSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREM 222
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K PD TYN I+ + + +D + L+EM D+G + + Y +++ + A+
Sbjct: 223 S-KTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMV-DNGFAPNVFSYNTVLHGFCKANR 280
Query: 166 LVNAESSTLVEAEKSITQ---RQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 222
+ NA L E+ +T+ ++Y +I GL D++D+ + + Q+
Sbjct: 281 VENA----LWLLEQMVTRGCPPDVVSYTTVI---NGLCKLDQVDEACRVMDKMIQRGCQP 333
Query: 223 N---YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 279
N Y ++ + +G L E++ + + I+ N ++ F E+A++
Sbjct: 334 NVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITY-NNIMHVFCRRNDMERAHQV 392
Query: 280 HMLLLQKNCAP 290
+++Q C P
Sbjct: 393 LQMMIQTGCPP 403
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 101/240 (42%), Gaps = 12/240 (5%)
Query: 15 ATRIDLMTKVFGIHSGERYFE---GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVK 71
+T ID + K I S + G+ A Y+ L+H AK +AE + +
Sbjct: 444 STLIDALCKAAAIDSAQELLRMSIGMD-CAPDVVAYSILIHALCKAKRLPEAESWLDVMV 502
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
++ + + YN ++ ++ L+ + ++ V+PD+ TY++ I S N+D
Sbjct: 503 KNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLD 562
Query: 132 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 191
K L+ M ++ D V Y L+N A V+ E +TY+
Sbjct: 563 SAFKMLERMK-EAKCVPDVVTYSALINGLCKAG-TVDKAFDVFQEMLGCGCAPNLVTYNT 620
Query: 192 LIILYAGLGNKDKIDQIWKSLR-MTKQKMT--SRNYICILSSYLMLGHLKEVGEIIDQWK 248
LI GL +K++Q + L M KQ T S Y C+++ L+E ++ + K
Sbjct: 621 LI---DGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMK 677
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/250 (20%), Positives = 109/250 (43%), Gaps = 4/250 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+T L+H A A EL + + + + N +++N ++ S +++ + +E+
Sbjct: 879 TFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEM 938
Query: 106 KRK-NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+ + PD+FTY+ + S + +D + +++M G S + V Y +L++ A
Sbjct: 939 EESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMV-SKGCSPNVVTYSSLLHGLCKAG 997
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
L A ++ L +S +TY+ +I + LG D+ + + + + Y
Sbjct: 998 KLDEA-TALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTY 1056
Query: 225 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 284
+L ++ G ++ +++ + ++ N LL F E+A + ++
Sbjct: 1057 TVLLDAFCKCGKAEDAIGLVEVMVEKGYVP-NLFTYNSLLDMFCKKDEVERACQLLSSMI 1115
Query: 285 QKNCAPTNAS 294
QK C P S
Sbjct: 1116 QKGCVPNVVS 1125
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 100/247 (40%), Gaps = 7/247 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY+ ++ + + A L E + S N + Y+ ++ G++++ +++ +
Sbjct: 950 TYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRM 1009
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
R P+I TYN I ID+ L+EM D G + V Y L++ +
Sbjct: 1010 TRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMV-DGGCQPNVVTYTVLLDAFCKCGK 1068
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+A V EK TY+ L+ ++ KD++++ + L QK N +
Sbjct: 1069 AEDAIGLVEVMVEKGYVP-NLFTYNSLLDMFC---KKDEVERACQLLSSMIQKGCVPNVV 1124
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDF--DISACNRLLGAFSDVGLTEKANEFHMLL 283
+ L +V E + +Q +++ DI N ++ A + A E L+
Sbjct: 1125 SYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLI 1184
Query: 284 LQKNCAP 290
+ C P
Sbjct: 1185 QESGCTP 1191
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 69/141 (48%), Gaps = 3/141 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY+AL++ A +KA ++F+ + + N + YN ++ + +VE+ A ++E +
Sbjct: 582 TYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIM 641
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
++++ PD TY I+ +++ + L EM D G D + Y L+ ++
Sbjct: 642 RKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMK-DKGCLPDRMTYGTLLRALQKTNN 700
Query: 166 LVNAESSTLVEAEKSITQRQW 186
L E L++ ++ + QW
Sbjct: 701 LELVEQ--LLKEMEATEEGQW 719
>gi|297736301|emb|CBI24939.3| unnamed protein product [Vitis vinifera]
Length = 485
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 117/280 (41%), Gaps = 15/280 (5%)
Query: 17 RIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLS 76
R + K+FG+ + ++E +TYT LL + K E+A LFE + L
Sbjct: 107 RYESALKIFGLLRKQHWYE------PRCQTYTKLLMMLGKCKQPEQASLLFEVMLSEGLR 160
Query: 77 FNALMYNEMMTLYMSVGQVEKVALVVEEIKR-KNVVPDIFTYNLWISSCAATLNIDQVKK 135
+Y +++ Y GQ++K VE++K + PD++TY++ I C D +++
Sbjct: 161 PTLDVYTALVSAYGHSGQLDKAFCTVEDMKSVSDCKPDVYTYSILIKCCTTLGRFDLIER 220
Query: 136 FLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIIL 195
EMS G V Y +++ Y A ESS E T + I
Sbjct: 221 IFTEMS-YLGIECSTVTYNTIIDGYGKADMFELMESSLTEMIESGTCLPDIFTLNSFIWA 279
Query: 196 YAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSY---LMLGHLKEVGEIIDQWKQSAT 252
Y G +K+++ + ++ + + + ++ SY M + V E + + S T
Sbjct: 280 YGNSGQIEKMEKWYDEFQLMGIRPDIKTFNILIRSYGKACMYEKMVSVMEFMKKRFYSPT 339
Query: 253 SDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 292
I N ++ F VG EK EF + + + P +
Sbjct: 340 ----IVTFNIVIEMFGRVGNIEKMEEFFLKMKHQGVKPNS 375
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 114/248 (45%), Gaps = 4/248 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV-ALVVEE 104
TY+ L+ + E +F + + + + YN ++ Y E + + + E
Sbjct: 201 TYSILIKCCTTLGRFDLIERIFTEMSYLGIECSTVTYNTIIDGYGKADMFELMESSLTEM 260
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
I+ +PDIFT N +I + + I++++K+ DE D +K N++ +
Sbjct: 261 IESGTCLPDIFTLNSFIWAYGNSGQIEKMEKWYDEFQLMGIRPD--IKTFNILIRSYGKA 318
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
+ S + +K +T++ +I ++ +GN +K+++ + ++ K S Y
Sbjct: 319 CMYEKMVSVMEFMKKRFYSPTIVTFNIVIEMFGRVGNIEKMEEFFLKMKHQGVKPNSITY 378
Query: 225 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 284
++S+Y G+LK+V I+ Q + S + D N +L A+ G E+ E +++
Sbjct: 379 CSLVSAYSKAGYLKKVDSILRQIENSDVT-LDTPFFNCVLSAYGQAGDVERMGELFLVMK 437
Query: 285 QKNCAPTN 292
++ C P N
Sbjct: 438 ERKCKPDN 445
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 23/108 (21%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
Query: 18 IDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVKQSNL 75
I++ +V I E +F + S TY +L+ Y+ A + +K + + +++ S++
Sbjct: 347 IEMFGRVGNIEKMEEFFLKMKHQGVKPNSITYCSLVSAYSKAGYLKKVDSILRQIENSDV 406
Query: 76 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 123
+ + +N +++ Y G VE++ + +K + PD T+ I +
Sbjct: 407 TLDTPFFNCVLSAYGQAGDVERMGELFLVMKERKCKPDNITFATMIQA 454
>gi|359487410|ref|XP_002273156.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Vitis vinifera]
Length = 538
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 117/280 (41%), Gaps = 15/280 (5%)
Query: 17 RIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLS 76
R + K+FG+ + ++E +TYT LL + K E+A LFE + L
Sbjct: 107 RYESALKIFGLLRKQHWYE------PRCQTYTKLLMMLGKCKQPEQASLLFEVMLSEGLR 160
Query: 77 FNALMYNEMMTLYMSVGQVEKVALVVEEIKR-KNVVPDIFTYNLWISSCAATLNIDQVKK 135
+Y +++ Y GQ++K VE++K + PD++TY++ I C D +++
Sbjct: 161 PTLDVYTALVSAYGHSGQLDKAFCTVEDMKSVSDCKPDVYTYSILIKCCTTLGRFDLIER 220
Query: 136 FLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIIL 195
EMS G V Y +++ Y A ESS E T + I
Sbjct: 221 IFTEMS-YLGIECSTVTYNTIIDGYGKADMFELMESSLTEMIESGTCLPDIFTLNSFIWA 279
Query: 196 YAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSY---LMLGHLKEVGEIIDQWKQSAT 252
Y G +K+++ + ++ + + + ++ SY M + V E + + S T
Sbjct: 280 YGNSGQIEKMEKWYDEFQLMGIRPDIKTFNILIRSYGKACMYEKMVSVMEFMKKRFYSPT 339
Query: 253 SDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 292
I N ++ F VG EK EF + + + P +
Sbjct: 340 ----IVTFNIVIEMFGRVGNIEKMEEFFLKMKHQGVKPNS 375
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 114/248 (45%), Gaps = 4/248 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV-ALVVEE 104
TY+ L+ + E +F + + + + YN ++ Y E + + + E
Sbjct: 201 TYSILIKCCTTLGRFDLIERIFTEMSYLGIECSTVTYNTIIDGYGKADMFELMESSLTEM 260
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
I+ +PDIFT N +I + + I++++K+ DE D +K N++ +
Sbjct: 261 IESGTCLPDIFTLNSFIWAYGNSGQIEKMEKWYDEFQLMGIRPD--IKTFNILIRSYGKA 318
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
+ S + +K +T++ +I ++ +GN +K+++ + ++ K S Y
Sbjct: 319 CMYEKMVSVMEFMKKRFYSPTIVTFNIVIEMFGRVGNIEKMEEFFLKMKHQGVKPNSITY 378
Query: 225 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 284
++S+Y G+LK+V I+ Q + S + D N +L A+ G E+ E +++
Sbjct: 379 CSLVSAYSKAGYLKKVDSILRQIENSDVT-LDTPFFNCVLSAYGQAGDVERMGELFLVMK 437
Query: 285 QKNCAPTN 292
++ C P N
Sbjct: 438 ERKCKPDN 445
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 23/108 (21%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
Query: 18 IDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVKQSNL 75
I++ +V I E +F + S TY +L+ Y+ A + +K + + +++ S++
Sbjct: 347 IEMFGRVGNIEKMEEFFLKMKHQGVKPNSITYCSLVSAYSKAGYLKKVDSILRQIENSDV 406
Query: 76 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 123
+ + +N +++ Y G VE++ + +K + PD T+ I +
Sbjct: 407 TLDTPFFNCVLSAYGQAGDVERMGELFLVMKERKCKPDNITFATMIQA 454
>gi|224072985|ref|XP_002303946.1| predicted protein [Populus trichocarpa]
gi|222841378|gb|EEE78925.1| predicted protein [Populus trichocarpa]
Length = 451
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 125/279 (44%), Gaps = 14/279 (5%)
Query: 5 KEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAE 64
K+ ++ DYA +D + KV G+ E++ E +P S + Y LL +KAE
Sbjct: 44 KQTDFTERDYACHLDCIAKVLGLWKAEKFIEKIPESFRGKLVYQTLLASCVSVLNIKKAE 103
Query: 65 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 124
+F +++ L +M+ +Y + + +K+ ++ +K +N+ P TY L I +
Sbjct: 104 SVFRKMRDLGLPITVEACEQMIIIYKRL-EKKKIPNILLMMKDQNIKPSFLTYKLLIDAK 162
Query: 125 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR 184
+ ++K ++ M + G D + YI+ L + L + EK +
Sbjct: 163 CQFNDTTGMEKLVEAMR-NEGMELDVFALAVIARHYISVG-LKDKADLILKQIEKRKQKG 220
Query: 185 QWI-TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE---V 240
+ L+ LYA LGN D++ +IWK + ++ I + ++ LG ++E V
Sbjct: 221 GGLGARRSLLSLYASLGNADEVGRIWKECKADPKQSEC---IAAIRAWGKLGKVEEAEAV 277
Query: 241 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 279
E++ Q ++ T + S LL + D LT K +
Sbjct: 278 SEMMLQTWKNPTFGYYTS----LLNVYIDNNLTSKGKDL 312
>gi|168045822|ref|XP_001775375.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673320|gb|EDQ59845.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 406
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 111/242 (45%), Gaps = 19/242 (7%)
Query: 66 LFERVKQSNLSFNALMYNEMMTLYMS-----VGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
F+ VK++ + +YN ++T ++ +G + + L E + N PD+ TYN+
Sbjct: 62 FFKEVKRNGHRPDTSLYNALITAHLQAEDKRIGFAKALQLFEEMKTKANCKPDLVTYNIL 121
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
+ A +I QV++F +EM + + + Y ++ Y A LV E +
Sbjct: 122 LRGSAQVRDILQVERFFEEMEVEK-IHPNLISYNGVIGAYGKAGDLVQMEKTLFTMRILK 180
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR----NYICILSSYLMLGH 236
+ +T + LI Y + K++Q++KS+ K K TSR Y +++SY LG
Sbjct: 181 HIKPDTVTSNTLIESYGYGRDFVKMEQVFKSMTAAKNKQTSRPDAKTYNILMASYARLG- 239
Query: 237 LKEVGEIIDQWK----QSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 292
EVG++ +W ++A ++ + L+ + +VG +E +LQ P
Sbjct: 240 --EVGKM--EWSCSRMEAANFKLNLRSYEILMTGYGEVGAIASMSECFYQMLQAGMQPQK 295
Query: 293 AS 294
++
Sbjct: 296 ST 297
>gi|224093190|ref|XP_002309826.1| predicted protein [Populus trichocarpa]
gi|222852729|gb|EEE90276.1| predicted protein [Populus trichocarpa]
Length = 1480
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 88/184 (47%), Gaps = 4/184 (2%)
Query: 31 ERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYM 90
E + P + T + Y A++ +YA K +EL + +++ + + +N ++ +
Sbjct: 241 EVFMRAEPSAGNTVQVYNAMMGVYARRGRFNKVQELLDLMRERGCKPDLVSFNTLINARL 300
Query: 91 SVG-QVEKVAL-VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSD 148
G + +A+ ++ E++R + PD TYN IS+C+ N+++ K D+M D
Sbjct: 301 KAGAMMPNLAIELLNEVRRSGLRPDTITYNTLISACSRASNLEEAAKVFDDMEAHHCQPD 360
Query: 149 DWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQI 208
W Y ++++Y AE + E ++Y+ L+ +A GN +K+ +I
Sbjct: 361 LWT-YNAMISVYGRCGLSGKAE-QLFNDLESRGFFPDAVSYNSLLYAFAREGNVEKVKEI 418
Query: 209 WKSL 212
W+ +
Sbjct: 419 WEEM 422
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/219 (19%), Positives = 98/219 (44%), Gaps = 11/219 (5%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
+ ++L +Y + K ++++R+K+ L + YN ++ +Y + E+ ++ E++
Sbjct: 956 WNSVLKMYVAIEDFRKTIQVYQRIKEDGLEPDEDTYNTLIVMYCRDHRPEEGFSLMHEMR 1015
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
+ P + TY ++S ++Q ++ +E+ G D Y ++ IY +
Sbjct: 1016 VAGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQ-SKGCKLDRSFYHTMMKIYRNSGSH 1074
Query: 167 VNAES--STLVEA--EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 222
AE S + +A E +I T L++ Y G + +++ +L+ T +++
Sbjct: 1075 SKAERLFSMMKDAGVEPTIA-----TMHLLMVSYGSSGQPQEAEKVLSNLKETGSNLSTL 1129
Query: 223 NYICILSSYLMLGHLK-EVGEIIDQWKQSATSDFDISAC 260
Y ++ +YL G + ++I K+ D I C
Sbjct: 1130 PYSSVIDAYLRNGDYNIGIQKLIQMKKEGLEPDHRIWTC 1168
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 58/117 (49%), Gaps = 1/117 (0%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
+TY +L+ + + E+AEELFE ++ + Y+ MM +Y + G K +
Sbjct: 1024 DTYKSLVASFGKQQLVEQAEELFEELQSKGCKLDRSFYHTMMKIYRNSGSHSKAERLFSM 1083
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 161
+K V P I T +L + S ++ + +K L + ++G + + Y ++++ Y+
Sbjct: 1084 MKDAGVEPTIATMHLLMVSYGSSGQPQEAEKVLSNLK-ETGSNLSTLPYSSVIDAYL 1139
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 90/204 (44%), Gaps = 10/204 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L+ + A E+A ++F+ ++ + + YN M+++Y G K + ++
Sbjct: 328 TYNTLISACSRASNLEEAAKVFDDMEAHHCQPDLWTYNAMISVYGRCGLSGKAEQLFNDL 387
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ + PD +YN + + A N+++VK+ +EM G D+ + Y ++++Y
Sbjct: 388 ESRGFFPDAVSYNSLLYAFAREGNVEKVKEIWEEMVKIGFGKDE-MTYNTMIHMYGKQGQ 446
Query: 166 LVNAESSTLV-EAEKSITQRQWITYDFLIILYAGLGNKDKIDQ---IWKSLRMTKQKMTS 221
N + L + + S +TY LI LG +KI + + + T K T
Sbjct: 447 --NELALQLYRDMQSSGRNPDAVTYTVLI---DSLGKTNKIAEAAGVMSEMLNTGVKPTL 501
Query: 222 RNYICILSSYLMLGHLKEVGEIID 245
+ Y ++ Y G E E D
Sbjct: 502 KTYSALICGYAKAGKPVEAEETFD 525
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 86/194 (44%), Gaps = 11/194 (5%)
Query: 52 HLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVV 111
L AGA A EL V++S L + + YN +++ +E+ A V ++++ +
Sbjct: 299 RLKAGAMMPNLAIELLNEVRRSGLRPDTITYNTLISACSRASNLEEAAKVFDDMEAHHCQ 358
Query: 112 PDIFTYNLWIS---SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVN 168
PD++TYN IS C + +Q+ L+ G D V Y +L+ + + V
Sbjct: 359 PDLWTYNAMISVYGRCGLSGKAEQLFNDLE----SRGFFPDAVSYNSLLYAFAREGN-VE 413
Query: 169 AESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICIL 228
E K + +TY+ +I +Y G + Q+++ ++ + + + Y ++
Sbjct: 414 KVKEIWEEMVKIGFGKDEMTYNTMIHMYGKQGQNELALQLYRDMQSSGRNPDAVTYTVLI 473
Query: 229 SSYLMLGHLKEVGE 242
S LG ++ E
Sbjct: 474 DS---LGKTNKIAE 484
>gi|356540375|ref|XP_003538665.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Glycine max]
Length = 1476
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 88/195 (45%), Gaps = 2/195 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY A++ +Y KAEELF+ ++ +A+ YN ++ + G EKV + EE+
Sbjct: 358 TYNAMISVYGRCARARKAEELFKELESKGFFPDAVTYNSLLYAFSREGNTEKVRDICEEM 417
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
++ D TYN I DQ + +M SG + D V Y L++ AS
Sbjct: 418 VKRGFGQDEMTYNTIIHMYGKQGRHDQAMQIYRDMK-SSGRNPDAVTYTVLIDSLGKASK 476
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ A ++ + E + + TY LI YA G +++ ++ + +R + K Y
Sbjct: 477 VEEA-ANVMSEMLDAGVKPTLHTYSALICAYAKAGKREEAEETFNCMRRSGIKPDRLAYS 535
Query: 226 CILSSYLMLGHLKEV 240
+L +L +K+
Sbjct: 536 VMLDFFLRFNEMKKA 550
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 105/251 (41%), Gaps = 5/251 (1%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK-VAL- 100
T + Y A++ +YA K +EL + +++ + + +N ++ M G +E +AL
Sbjct: 248 TVQVYNAMMGVYARNGRFSKVKELLDLMRERGCVPDLVSFNTLINARMKSGAMEPNLALQ 307
Query: 101 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
++ E++R + PDI TYN IS+C+ N+++ +M D W Y ++++Y
Sbjct: 308 LLNEVRRSGIRPDIITYNTLISACSRESNLEEAVAVFSDMESHRCQPDLWT-YNAMISVY 366
Query: 161 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 220
+ AE E E +TY+ L+ ++ GN +K+ I + +
Sbjct: 367 GRCARARKAE-ELFKELESKGFFPDAVTYNSLLYAFSREGNTEKVRDICEEMVKRGFGQD 425
Query: 221 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 280
Y I+ Y G + +I K S + D L+ + E+A
Sbjct: 426 EMTYNTIIHMYGKQGRHDQAMQIYRDMKSSGRNP-DAVTYTVLIDSLGKASKVEEAANVM 484
Query: 281 MLLLQKNCAPT 291
+L PT
Sbjct: 485 SEMLDAGVKPT 495
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 95/208 (45%), Gaps = 5/208 (2%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
A + +L + A A E+F R +S++ +YN MM +Y G+ KV
Sbjct: 212 APNARMVATILGVLGKANQEALAVEIFARA-ESSVGDTVQVYNAMMGVYARNGRFSKVKE 270
Query: 101 VVEEIKRKNVVPDIFTYNLWISSC--AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 158
+++ ++ + VPD+ ++N I++ + + + + L+E+ SG D + Y L++
Sbjct: 271 LLDLMRERGCVPDLVSFNTLINARMKSGAMEPNLALQLLNEVR-RSGIRPDIITYNTLIS 329
Query: 159 IYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQK 218
S+L A + + E Q TY+ +I +Y K ++++K L
Sbjct: 330 ACSRESNLEEA-VAVFSDMESHRCQPDLWTYNAMISVYGRCARARKAEELFKELESKGFF 388
Query: 219 MTSRNYICILSSYLMLGHLKEVGEIIDQ 246
+ Y +L ++ G+ ++V +I ++
Sbjct: 389 PDAVTYNSLLYAFSREGNTEKVRDICEE 416
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 41/233 (17%), Positives = 90/233 (38%), Gaps = 38/233 (16%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L+ + E+A +F ++ + YN M+++Y + K + +E+
Sbjct: 323 TYNTLISACSRESNLEEAVAVFSDMESHRCQPDLWTYNAMISVYGRCARARKAEELFKEL 382
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ K PD TYN + + + N ++V+ +EM G D+
Sbjct: 383 ESKGFFPDAVTYNSLLYAFSREGNTEKVRDICEEMVKRGFGQDE---------------- 426
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+TY+ +I +Y G D+ QI++ ++ + + + Y
Sbjct: 427 ---------------------MTYNTIIHMYGKQGRHDQAMQIYRDMKSSGRNPDAVTYT 465
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 278
++ S ++E ++ + + + + L+ A++ G E+A E
Sbjct: 466 VLIDSLGKASKVEEAANVMSEMLDAGVKP-TLHTYSALICAYAKAGKREEAEE 517
Score = 44.7 bits (104), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 52/103 (50%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 102
T TY+AL+ YA A E+AEE F +++S + + L Y+ M+ ++ +++K +
Sbjct: 495 TLHTYSALICAYAKAGKREEAEETFNCMRRSGIKPDRLAYSVMLDFFLRFNEMKKAMGLY 554
Query: 103 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSG 145
E+ R+ PD Y + + + D V + + +M SG
Sbjct: 555 HEMIREGFTPDNGLYEVMMHALVRENMWDVVDRIIRDMEELSG 597
Score = 44.7 bits (104), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 107/236 (45%), Gaps = 8/236 (3%)
Query: 49 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 108
++L LY G + + ++++++ ++L + YN ++ +Y + E+ ++ +++
Sbjct: 954 SILKLYLGIEDFKSMGIIYQKIQDASLKPDEETYNTLIIMYCRDRRPEEGFSLMNKMRSL 1013
Query: 109 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVN 168
+ P + TY I++ +Q ++ +E+ + G D Y ++ Y T+
Sbjct: 1014 GLEPKLDTYRSLITAFNKQRMYEQAEELFEELRSN-GYKLDRAFYHLMMKTYRTSGDHRK 1072
Query: 169 AESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICIL 228
AE+ + E I + T L++ Y G ++ + + K+LR T + + Y ++
Sbjct: 1073 AENLLAIMKESGI-EPTISTMHLLMVSYGKSGQPEEAENVLKNLRTTGVVLDTLPYSSVI 1131
Query: 229 SSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG-LTEKANEFHMLL 283
+YL G K E + + K++ I +R+ F L+E NE +LL
Sbjct: 1132 DAYLKKGDFKAGIEKLTEMKEAG-----IEPDHRIWTCFIRAATLSEGTNEAIVLL 1182
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 57/117 (48%), Gaps = 1/117 (0%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
+TY +L+ + + E+AEELFE ++ + + Y+ MM Y + G K ++
Sbjct: 1020 DTYRSLITAFNKQRMYEQAEELFEELRSNGYKLDRAFYHLMMKTYRTSGDHRKAENLLAI 1079
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 161
+K + P I T +L + S + ++ + L + +G D + Y ++++ Y+
Sbjct: 1080 MKESGIEPTISTMHLLMVSYGKSGQPEEAENVLKNLRT-TGVVLDTLPYSSVIDAYL 1135
>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g12700, mitochondrial-like
[Glycine max]
Length = 555
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 64/118 (54%), Gaps = 5/118 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY AL+ + + +A ELF R+ + L + L YN ++ Y + V++ ++ +EI
Sbjct: 302 TYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEI 361
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
+ KN+VP++ TYN I + V++ +DEM CD G S D V Y NI++ A
Sbjct: 362 RCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEM-CDRGQSPDIVTY----NIFLDA 414
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 107/282 (37%), Gaps = 23/282 (8%)
Query: 15 ATRIDLMTKVF------------GIHSGERYFEGLPLSAKTSE--------TYTALLHLY 54
A R+DLM K + G+ + + L L K E TY+ ++
Sbjct: 146 AFRLDLMAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGL 205
Query: 55 AGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDI 114
+ A LF V + + + YN ++ SVGQ + ++ + R N+ PD
Sbjct: 206 CKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDD 265
Query: 115 FTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTL 174
+T+N+ + + I + + M G D V Y L+ + ++++ A
Sbjct: 266 YTFNILVDALCKEGRIVEAQGVFAVMM-KRGEKPDIVTYNALMEGFCLSNNVSEAR-ELF 323
Query: 175 VEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLML 234
K + + Y+ LI Y + D+ ++K +R Y ++ L
Sbjct: 324 NRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKL 383
Query: 235 GHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
G + V E++D+ S DI N L AF EKA
Sbjct: 384 GRMSCVQELVDEMCDRGQSP-DIVTYNIFLDAFCKSKPYEKA 424
>gi|297746078|emb|CBI16134.3| unnamed protein product [Vitis vinifera]
Length = 453
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 113/246 (45%), Gaps = 8/246 (3%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
+V + + + DY+ ++ TK+ GI GE+ F +PL + Y L+
Sbjct: 115 VVRERPYRPKELDYSYLLEFTTKLHGISQGEKLFSHVPLEFQNELLYNNLVIACLDKGVI 174
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
+ +++++ + L++N ++ L+ S + + + ++ ++K V + TYN+
Sbjct: 175 RLSLAYMKKMRELGHPISYLVFNRLIILHSSPHRRKIIPRILTQMKADKVARHVSTYNIL 234
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA-EK 179
+ A NI+ + K EM ++ V Y L + A AE+ VEA EK
Sbjct: 235 MKIEANEHNIEGLVKVFGEMKQQQVEPNE-VSYCLLATAHAVAKLYTVAEA--YVEAVEK 291
Query: 180 SITQRQWITYDFLIILYAGLGNKDKIDQIWKS---LRMTKQKMTSRNYICILSSYLMLGH 236
SIT W T D LIILY LG ++ + ++ R+ + N IC+ ++ L
Sbjct: 292 SITGNNWSTLDVLIILYGYLGKPTDLEPLVRNKVKKRVEINRAIQFNDICLFQTWEALKT 351
Query: 237 LKEVGE 242
L E+G+
Sbjct: 352 L-ELGK 356
>gi|242093812|ref|XP_002437396.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
gi|241915619|gb|EER88763.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
Length = 786
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 108/229 (47%), Gaps = 4/229 (1%)
Query: 38 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV-E 96
P S YT +LH + A E+A ELF +++ ++ + YN ++ +Y +G+
Sbjct: 167 PGSRLDVRAYTTVLHALSRAGRYERAVELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWP 226
Query: 97 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 156
++ +++E++ V PD FT + I++C +D+ F +++ G + V Y L
Sbjct: 227 RIVALLDEMRAAGVEPDDFTASTVIAACCRDGLVDEAVAFFEDLKA-RGHTPCVVTYNAL 285
Query: 157 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 216
+ ++ A + A L E E+ Q +TY+ L YA G ++ + ++
Sbjct: 286 LQVFGKAGNYTEA-LRVLKEMEQDGCQPDAVTYNELAGTYARAGFYEEAAKCLDTMTSKG 344
Query: 217 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLG 265
+ Y ++++Y +G + E + DQ K+S +++ N +LG
Sbjct: 345 LLPNAFTYNTVMTAYGNIGKVDEALALFDQMKKSGCVP-NVNTYNFILG 392
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 88/194 (45%), Gaps = 25/194 (12%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L YA A + E+A + + + L NA YN +MT Y ++G+V++ + +++
Sbjct: 316 TYNELAGTYARAGFYEEAAKCLDTMTSKGLLPNAFTYNTVMTAYGNIGKVDEALALFDQM 375
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI------ 159
K+ VP++ TYN + + + L EMS SG + + V + ++ +
Sbjct: 376 KKSGCVPNVNTYNFILGMLGKKSRFTVMLEMLGEMS-RSGCTPNRVTWNTMLAVCGKRGM 434
Query: 160 --YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 217
Y+T ++ S VE + TY+ LI Y G++ +++
Sbjct: 435 EDYVT--RVLEGMKSCGVELSRD-------TYNTLIAAYGRCGSRTNAFKMY-------N 478
Query: 218 KMTSRNYICILSSY 231
+MTS + L++Y
Sbjct: 479 EMTSAGFAPCLTTY 492
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
+ ++L +YA K E+F+ +KQS LS + + YN +M +Y + + ++ ++K
Sbjct: 597 FNSMLSMYAKNGMYSKVTEIFDSIKQSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLK 656
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 162
V PD+ +YN I+ I + ++ L EM D G + V Y LV Y +
Sbjct: 657 SSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIAD-GMAPCVVTYHTLVGGYAS 711
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/205 (20%), Positives = 88/205 (42%), Gaps = 4/205 (1%)
Query: 33 YFEGLPLSAKTS--ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYM 90
+FE L T TY ALL ++ A +A + + ++Q +A+ YNE+ Y
Sbjct: 266 FFEDLKARGHTPCVVTYNALLQVFGKAGNYTEALRVLKEMEQDGCQPDAVTYNELAGTYA 325
Query: 91 SVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDW 150
G E+ A ++ + K ++P+ FTYN +++ +D+ D+M G
Sbjct: 326 RAGFYEEAAKCLDTMTSKGLLPNAFTYNTVMTAYGNIGKVDEALALFDQMK--KSGCVPN 383
Query: 151 VKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK 210
V N + + L E +S +T++ ++ + G +D + ++ +
Sbjct: 384 VNTYNFILGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLE 443
Query: 211 SLRMTKQKMTSRNYICILSSYLMLG 235
++ +++ Y ++++Y G
Sbjct: 444 GMKSCGVELSRDTYNTLIAAYGRCG 468
Score = 43.9 bits (102), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 61/136 (44%), Gaps = 2/136 (1%)
Query: 64 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 123
E+ F+ VK + + +++N M+++Y G KV + + IK+ + PD+ TYN +
Sbjct: 579 EKAFQEVKARGYNPDLVIFNSMLSMYAKNGMYSKVTEIFDSIKQSGLSPDLITYNSLMDM 638
Query: 124 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQ 183
A + +K L+++ S D V Y ++N + L+ L E
Sbjct: 639 YAKCSESWEAEKILNQLK-SSQVKPDVVSYNTVINGFCKQG-LIKEAQRILSEMIADGMA 696
Query: 184 RQWITYDFLIILYAGL 199
+TY L+ YA L
Sbjct: 697 PCVVTYHTLVGGYASL 712
Score = 40.4 bits (93), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 47/250 (18%), Positives = 97/250 (38%), Gaps = 7/250 (2%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 102
+ +TY L+ Y A +++ + + + YN ++ + G +V
Sbjct: 453 SRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFAPCLTTYNALLNVLSRQGDWSTAQSIV 512
Query: 103 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGS--DDWVKYVNLVNIY 160
+++ K P+ +Y+L + A NI + E+ GG+ WV LV
Sbjct: 513 SKMRTKGFKPNDQSYSLLLQCYAKGGNIAGIDAIEKEV---YGGTVFPSWVILRTLVIAN 569
Query: 161 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 220
L E + E + + ++ ++ +YA G K+ +I+ S++ +
Sbjct: 570 FKCRRLGGIEKA-FQEVKARGYNPDLVIFNSMLSMYAKNGMYSKVTEIFDSIKQSGLSPD 628
Query: 221 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 280
Y ++ Y E +I++Q K S D+ + N ++ F GL ++A
Sbjct: 629 LITYNSLMDMYAKCSESWEAEKILNQLKSSQVKP-DVVSYNTVINGFCKQGLIKEAQRIL 687
Query: 281 MLLLQKNCAP 290
++ AP
Sbjct: 688 SEMIADGMAP 697
Score = 37.0 bits (84), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 18/95 (18%), Positives = 49/95 (51%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY +L+ +YA + +AE++ ++K S + + + YN ++ + G +++ ++ E+
Sbjct: 631 TYNSLMDMYAKCSESWEAEKILNQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEM 690
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
+ P + TY+ + A+ + ++ ++ M
Sbjct: 691 IADGMAPCVVTYHTLVGGYASLEMFSEAREVINYM 725
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 117/247 (47%), Gaps = 5/247 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERV-KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
T++AL+ + A+ ++A +L++ + S+ + + Y ++ + G +EK ++
Sbjct: 150 TFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGV 209
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
++ + VP++ TY+ + ++DQ M+ G + V Y L++ + A+
Sbjct: 210 MEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMT-SKGCVPNVVTYTTLIH-GLCAA 267
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR-N 223
H V+A + E + ++Y+ L+ Y LG ++ Q++K + TK + R
Sbjct: 268 HKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEM-ATKSCLPDRIT 326
Query: 224 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 283
Y C++ + L+E +++ K +A D D+ + ++ +S +A EF +
Sbjct: 327 YTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEM 386
Query: 284 LQKNCAP 290
+ +N AP
Sbjct: 387 IARNVAP 393
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 109/253 (43%), Gaps = 17/253 (6%)
Query: 46 TYTALLHLYAGAKWTEKAEELF-ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
TY+ +++ + ++A E+ E V + ++ + + Y ++ G++++ +V E
Sbjct: 79 TYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVRE 138
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+K K V PD FT++ I+ +D+ K E+ S D V Y L++ + +
Sbjct: 139 MKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSG 198
Query: 165 HLVNA-ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 223
+L A + ++E K + +TY L+ GL +DQ R +MTS+
Sbjct: 199 NLEKAMKMLGVMEGRKCVP--NVVTYSSLL---HGLCKAGDLDQALDLFR----RMTSKG 249
Query: 224 YICILSSYLMLGHLKEVGEIIDQWK------QSATSDFDISACNRLLGAFSDVGLTEKAN 277
+ + +Y L H +D + + D + N LL + +G E+A
Sbjct: 250 CVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAK 309
Query: 278 EFHMLLLQKNCAP 290
+ + K+C P
Sbjct: 310 QLFKEMATKSCLP 322
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 88/203 (43%), Gaps = 7/203 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT L+H A + A L + + + + + YN ++ Y +G++E+ + +E+
Sbjct: 256 TYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEM 315
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K+ +PD TY + +++ + L+ M +G D V Y +V Y A
Sbjct: 316 ATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKR 375
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
V A + + E +TY LI GL ++D ++ + K + R
Sbjct: 376 FVEA-AEFIQEMIARNVAPNAVTYSSLI---DGLCKAGRVDH---AMEVLKNMVNKRVEP 428
Query: 226 CILSSYLMLGHLKEVGEIIDQWK 248
+ + ++G L +G++ + WK
Sbjct: 429 SVGTFNSVIGALCRLGDMDEAWK 451
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 51/253 (20%), Positives = 110/253 (43%), Gaps = 17/253 (6%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+T ++ + A ++A FE++++ ++ N YN ++ K V++E+
Sbjct: 9 TWTIIIDGFCKANQLKQALACFEKMREF-VAPNERTYNVVVNGLCKARLTSKAYEVLKEM 67
Query: 106 KR-KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+ K+V PD+ TY+ I+ +D+ + L EM G + D V Y ++V+
Sbjct: 68 RDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDG 127
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN- 223
+ A + E + + T+ LI G N K+D+ +L++ K+ +TS +
Sbjct: 128 KMDRA-CEMVREMKLKGVEPDKFTFSALI---TGWCNARKVDE---ALKLYKEILTSSSW 180
Query: 224 ------YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 277
Y ++ + G+L++ +++ + ++ + LL G ++A
Sbjct: 181 KPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVP-NVVTYSSLLHGLCKAGDLDQAL 239
Query: 278 EFHMLLLQKNCAP 290
+ + K C P
Sbjct: 240 DLFRRMTSKGCVP 252
>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
Length = 817
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 102/234 (43%), Gaps = 3/234 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY +++H A+ +KAE ++ + N YN ++ Y S GQ ++ V +E+
Sbjct: 259 TYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM 318
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+R +++PD+ T ++ + S I + + D M+ G + D Y ++N Y T
Sbjct: 319 RRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAM-KGQNPDVFSYNIMLNGYATKGC 377
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
LV+ + I + T++ LI YA G DK I+ +R K Y
Sbjct: 378 LVDMTDLFDLMLGDGIAP-DFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYR 436
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 279
++++ +G + + E +Q + D A N L+ F G KA E
Sbjct: 437 TVIAALCRIGKMDDAMEKFNQMIDQGVAP-DKYAYNCLIQGFCTHGSLLKAKEL 489
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/233 (20%), Positives = 98/233 (42%), Gaps = 5/233 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSN--LSFNALMYNEMMTLYMSVGQVEKVALVVE 103
+Y+ LL + +A++L + + S N + YN ++ + G V K + +
Sbjct: 187 SYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFK 246
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
E+ ++ + PD+ TYN + + +D+ + FL +M ++W Y NL+ Y +
Sbjct: 247 EMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWT-YNNLIYGYSST 305
Query: 164 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 223
A E + +T L+ G + ++ ++ M Q +
Sbjct: 306 GQWKEA-VRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFS 364
Query: 224 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
Y +L+ Y G L ++ ++ D + D N L+ A+++ G+ +KA
Sbjct: 365 YNIMLNGYATKGCLVDMTDLFDLMLGDGIAP-DFYTFNVLIKAYANCGMLDKA 416
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 56/293 (19%), Positives = 106/293 (36%), Gaps = 39/293 (13%)
Query: 35 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 94
+G + + TS TY L+ A E A F ++ ++ L N ++ N ++ + +
Sbjct: 105 QGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKR 164
Query: 95 V-EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM------------- 140
E + +++ VPD+F+Y++ + S Q L M
Sbjct: 165 TDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVA 224
Query: 141 ----------------SCD-------SGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA 177
+CD G D V Y ++V+ A + AE+
Sbjct: 225 YNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMV 284
Query: 178 EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHL 237
K + W TY+ LI Y+ G + +++K +R ++ S G +
Sbjct: 285 NKRVLPNNW-TYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKI 343
Query: 238 KEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
KE ++ D + D+ + N +L ++ G + L+L AP
Sbjct: 344 KEARDVFDTMAMKGQNP-DVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAP 395
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/194 (15%), Positives = 85/194 (43%), Gaps = 2/194 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+ L+ YA +KA +F ++ + + + Y ++ +G+++ ++
Sbjct: 399 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQM 458
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ V PD + YN I ++ + K+ + E+ ++G D V + +++N
Sbjct: 459 IDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIM-NNGMHLDIVFFSSIINNLCKLGR 517
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+++A++ + + + Y+ L+ Y +G +K +++ ++ + Y
Sbjct: 518 VMDAQNIFDLTVNVGL-HPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYG 576
Query: 226 CILSSYLMLGHLKE 239
+++ Y +G + E
Sbjct: 577 TLVNGYCKIGRIDE 590
>gi|297806221|ref|XP_002870994.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316831|gb|EFH47253.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 819
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 118/267 (44%), Gaps = 6/267 (2%)
Query: 8 VLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEE 65
+L +S A I ++ K + S F GL + + +YT+L+ +A + +A
Sbjct: 170 MLDNSVIAIVISMLGKEGRVSSAANLFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVN 229
Query: 66 LFERVKQSNLSFNALMYNEMMTLYMSVGQV-EKVALVVEEIKRKNVVPDIFTYNLWISSC 124
+F+++++ + YN ++ ++ +G K+ +VE++K + PD +TYN I+ C
Sbjct: 230 VFKKMEEEGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCC 289
Query: 125 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR 184
+ + +EM +G S D V Y L+++Y SH L E E +
Sbjct: 290 KRGSLHQEAAQVFEEMKA-AGFSHDKVTYNALLDVY-GKSHRPKEAMKVLNEMELNGFSP 347
Query: 185 QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEII 244
+TY+ LI YA G D+ ++ + K Y +LS + G ++ I
Sbjct: 348 SIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMNIF 407
Query: 245 DQWKQSATSDFDISACNRLLGAFSDVG 271
++ + + +I N + + + G
Sbjct: 408 EEMRNAGCKP-NICTFNAFIKMYGNRG 433
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/250 (20%), Positives = 106/250 (42%), Gaps = 3/250 (1%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
A + TY L+ ++A ++FE +K + S + + YN ++ +Y + ++
Sbjct: 276 APDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSHDKVTYNALLDVYGKSHRPKEAMK 335
Query: 101 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
V+ E++ P I TYN IS+ A +D+ + ++M+ + G D Y L++ +
Sbjct: 336 VLNEMELNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMA-EKGTKPDVFTYTTLLSGF 394
Query: 161 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 220
A V + + E + + T++ I +Y G + +I+ + +
Sbjct: 395 ERAGK-VESAMNIFEEMRNAGCKPNICTFNAFIKMYGNRGKFVDMMKIFDEINVCGLSPD 453
Query: 221 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 280
+ +L+ + G EV + + K++ + N L+ A+S G E+A +
Sbjct: 454 IVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVP-ERETFNTLISAYSRCGSFEQAMTVY 512
Query: 281 MLLLQKNCAP 290
+L P
Sbjct: 513 RRMLDAGVTP 522
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/245 (16%), Positives = 103/245 (42%), Gaps = 3/245 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY ALL +Y + ++A ++ ++ + S + + YN +++ Y G +++ + ++
Sbjct: 316 TYNALLDVYGKSHRPKEAMKVLNEMELNGFSPSIVTYNSLISAYARDGMLDEAMELKNQM 375
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K PD+FTY +S ++ +EM ++G + + + +Y
Sbjct: 376 AEKGTKPDVFTYTTLLSGFERAGKVESAMNIFEEMR-NAGCKPNICTFNAFIKMYGNRGK 434
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
V+ E +T++ L+ ++ G ++ ++K ++ +
Sbjct: 435 FVDM-MKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFN 493
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 285
++S+Y G ++ + + + + D+S N +L A + G+ E++ + +
Sbjct: 494 TLISAYSRCGSFEQAMTVYRRMLDAGVTP-DLSTYNTVLAALARGGMWEQSEKVLAEMED 552
Query: 286 KNCAP 290
C P
Sbjct: 553 GRCKP 557
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 97/233 (41%), Gaps = 14/233 (6%)
Query: 46 TYTALLHLYA--GAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
TY +L+++ G W K L E++K ++ +A YN ++T ++ A V E
Sbjct: 245 TYNVILNVFGKMGTPWN-KITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFE 303
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
E+K D TYN + + + K L+EM + G S V Y +L++ Y
Sbjct: 304 EMKAAGFSHDKVTYNALLDVYGKSHRPKEAMKVLNEMELN-GFSPSIVTYNSLISAYARD 362
Query: 164 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 223
L A AEK T+ TY L+ + G + I++ +R K
Sbjct: 363 GMLDEAMELKNQMAEKG-TKPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAGCKPN--- 418
Query: 224 YICILSSYLML----GHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGL 272
IC ++++ + G ++ +I D+ S DI N LL F G+
Sbjct: 419 -ICTFNAFIKMYGNRGKFVDMMKIFDEINVCGLSP-DIVTWNTLLAVFGQNGM 469
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 67/168 (39%), Gaps = 2/168 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T +++ +Y + KA E+ + +K+ + + YN +M ++ K ++ EI
Sbjct: 631 TLNSMVSIYGRRQMVGKANEVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREI 690
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K + PDI +YN I + + + EM DSG D + Y + Y S
Sbjct: 691 LAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMR-DSGIVPDVITYNTFIGSYAADSM 749
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 213
A + Q TY+ ++ Y L KD+ + LR
Sbjct: 750 FEEAIGVVRYMIKHGCRPNQN-TYNSIVDGYCKLNRKDEAKLFVEDLR 796
>gi|22331104|ref|NP_188178.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273796|sp|Q9LRP6.1|PP234_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g15590, mitochondrial; Flags: Precursor
gi|11994226|dbj|BAB01348.1| DNA-binding protein [Arabidopsis thaliana]
gi|20856658|gb|AAM26678.1| AT3g15590/MQD17_5 [Arabidopsis thaliana]
gi|27363266|gb|AAO11552.1| At3g15590/MQD17_5 [Arabidopsis thaliana]
gi|332642175|gb|AEE75696.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 610
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 104/204 (50%), Gaps = 5/204 (2%)
Query: 6 EFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEE 65
+F ++++YA+++DL+ KV + E + + +P S++ Y LL KAE+
Sbjct: 204 QFEFTEANYASQLDLVAKVHSLQKAEIFLKDIPESSRGEVVYRTLLANCVLKHHVNKAED 263
Query: 66 LFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCA 125
+F ++K+ + N+++ LY S+ +K++ V+ ++R+N+ P TY+ I+S
Sbjct: 264 IFNKMKELKFPTSVFACNQLLLLY-SMHDRKKISDVLLLMERENIKPSRATYHFLINSKG 322
Query: 126 ATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAE-KSITQR 184
+I ++K ++ + + D ++ + L YI A L + E E K + Q
Sbjct: 323 LAGDITGMEKIVETIKEEGIELDPELQSI-LAKYYIRAG-LKERAQDLMKEIEGKGLQQT 380
Query: 185 QWITYDFLIILYAGLGNKDKIDQI 208
W+ L+ LYA +G+ D + ++
Sbjct: 381 PWVCRS-LLPLYADIGDSDNVRRL 403
>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
Length = 814
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 102/234 (43%), Gaps = 3/234 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY +++H A+ +KAE ++ + N YN ++ Y S GQ ++ V +E+
Sbjct: 256 TYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM 315
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+R +++PD+ T ++ + S I + + D M+ G + D Y ++N Y T
Sbjct: 316 RRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAM-KGQNPDVFSYNIMLNGYATKGC 374
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
LV+ + I + T++ LI YA G DK I+ +R K Y
Sbjct: 375 LVDMTDLFDLMLGDGIAP-DFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYR 433
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 279
++++ +G + + E +Q + D A N L+ F G KA E
Sbjct: 434 TVIAALCRIGKMDDAMEKFNQMIDQGVAP-DKYAYNCLIQGFCTHGSLLKAKEL 486
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/233 (20%), Positives = 98/233 (42%), Gaps = 5/233 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSN--LSFNALMYNEMMTLYMSVGQVEKVALVVE 103
+Y+ LL + +A++L + + S N + YN ++ + G V K + +
Sbjct: 184 SYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFK 243
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
E+ ++ + PD+ TYN + + +D+ + FL +M ++W Y NL+ Y +
Sbjct: 244 EMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWT-YNNLIYGYSST 302
Query: 164 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 223
A E + +T L+ G + ++ ++ M Q +
Sbjct: 303 GQWKEA-VRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFS 361
Query: 224 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
Y +L+ Y G L ++ ++ D + D N L+ A+++ G+ +KA
Sbjct: 362 YNIMLNGYATKGCLVDMTDLFDLMLGDGIAP-DFYTFNVLIKAYANCGMLDKA 413
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 56/293 (19%), Positives = 106/293 (36%), Gaps = 39/293 (13%)
Query: 35 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 94
+G + + TS TY L+ A E A F ++ ++ L N ++ N ++ + +
Sbjct: 102 QGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKR 161
Query: 95 V-EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM------------- 140
E + +++ VPD+F+Y++ + S Q L M
Sbjct: 162 TDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVA 221
Query: 141 ----------------SCD-------SGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA 177
+CD G D V Y ++V+ A + AE+
Sbjct: 222 YNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMV 281
Query: 178 EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHL 237
K + W TY+ LI Y+ G + +++K +R ++ S G +
Sbjct: 282 NKRVLPNNW-TYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKI 340
Query: 238 KEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
KE ++ D + D+ + N +L ++ G + L+L AP
Sbjct: 341 KEARDVFDTMAMKGQNP-DVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAP 392
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 41/228 (17%), Positives = 99/228 (43%), Gaps = 11/228 (4%)
Query: 14 YATRIDL--MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVK 71
YAT+ L MT +F + G+ G+ A T+ L+ YA +KA +F ++
Sbjct: 369 YATKGCLVDMTDLFDLMLGD----GI---APDFYTFNVLIKAYANCGMLDKAMIIFNEMR 421
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
+ + + Y ++ +G+++ ++ + V PD + YN I ++
Sbjct: 422 DHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLL 481
Query: 132 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 191
+ K+ + E+ ++G D V + +++N +++A++ + + + Y
Sbjct: 482 KAKELISEIM-NNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGL-HPDAVVYSM 539
Query: 192 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 239
L+ Y +G +K +++ ++ + Y +++ Y +G + E
Sbjct: 540 LMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDE 587
>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
Length = 827
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 102/234 (43%), Gaps = 3/234 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY +++H A+ +KAE ++ + N YN ++ Y S GQ ++ V +E+
Sbjct: 269 TYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM 328
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+R +++PD+ T ++ + S I + + D M+ G + D Y ++N Y T
Sbjct: 329 RRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAM-KGQNPDVFSYNIMLNGYATKGC 387
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
LV+ + I + T++ LI YA G DK I+ +R K Y
Sbjct: 388 LVDMTDLFDLMLGDGIAP-DFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYR 446
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 279
++++ +G + + E +Q + D A N L+ F G KA E
Sbjct: 447 TVIAALCRIGKMDDAMEKFNQMIDQGVAP-DKYAYNCLIQGFCTHGSLLKAKEL 499
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/233 (20%), Positives = 98/233 (42%), Gaps = 5/233 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSN--LSFNALMYNEMMTLYMSVGQVEKVALVVE 103
+Y+ LL + +A++L + + S N + YN ++ + G V K + +
Sbjct: 197 SYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFK 256
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
E+ ++ + PD+ TYN + + +D+ + FL +M ++W Y NL+ Y +
Sbjct: 257 EMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWT-YNNLIYGYSST 315
Query: 164 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 223
A E + +T L+ G + ++ ++ M Q +
Sbjct: 316 GQWKEA-VRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFS 374
Query: 224 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
Y +L+ Y G L ++ ++ D + D N L+ A+++ G+ +KA
Sbjct: 375 YNIMLNGYATKGCLVDMTDLFDLMLGDGIAP-DFYTFNVLIKAYANCGMLDKA 426
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 56/293 (19%), Positives = 106/293 (36%), Gaps = 39/293 (13%)
Query: 35 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 94
+G + + TS TY L+ A E A F ++ ++ L N ++ N ++ + +
Sbjct: 115 QGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKR 174
Query: 95 V-EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM------------- 140
E + +++ VPD+F+Y++ + S Q L M
Sbjct: 175 TDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVA 234
Query: 141 ----------------SCD-------SGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA 177
+CD G D V Y ++V+ A + AE+
Sbjct: 235 YNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMV 294
Query: 178 EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHL 237
K + W TY+ LI Y+ G + +++K +R ++ S G +
Sbjct: 295 NKRVLPNNW-TYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKI 353
Query: 238 KEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
KE ++ D + D+ + N +L ++ G + L+L AP
Sbjct: 354 KEARDVFDTMAMKGQNP-DVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAP 405
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 41/228 (17%), Positives = 99/228 (43%), Gaps = 11/228 (4%)
Query: 14 YATRIDL--MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVK 71
YAT+ L MT +F + G+ G+ A T+ L+ YA +KA +F ++
Sbjct: 382 YATKGCLVDMTDLFDLMLGD----GI---APDFYTFNVLIKAYANCGMLDKAMIIFNEMR 434
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
+ + + Y ++ +G+++ ++ + V PD + YN I ++
Sbjct: 435 DHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLL 494
Query: 132 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 191
+ K+ + E+ ++G D V + +++N +++A++ + + + Y
Sbjct: 495 KAKELISEIM-NNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGL-HPDAVVYSM 552
Query: 192 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 239
L+ Y +G +K +++ ++ + Y +++ Y +G + E
Sbjct: 553 LMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDE 600
>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
[Arabidopsis thaliana]
gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 606
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 95/202 (47%), Gaps = 4/202 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY AL++ + ++A ++F VK MYN ++ Y +G+++ + EE+
Sbjct: 368 TYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEM 427
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+R+ +VPD+ TYN I+ NI+ KK D+++ S G D V + L+ Y
Sbjct: 428 EREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLT--SKGLPDLVTFHILMEGYCRKGE 485
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ-KMTSRNY 224
A + L E K + + +TY+ ++ Y GN + + ++ +M +Y
Sbjct: 486 SRKA-AMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASY 544
Query: 225 ICILSSYLMLGHLKEVGEIIDQ 246
+L Y G L++ ++++
Sbjct: 545 NVLLQGYSQKGKLEDANMLLNE 566
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 53/111 (47%), Gaps = 1/111 (0%)
Query: 50 LLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKN 109
L+ YA E E F+R +AL +M + + V V +E+ R+
Sbjct: 159 LVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRK 218
Query: 110 VVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
+ P++FT+N+ I++ T +++ + +++M G S + V Y L++ Y
Sbjct: 219 IQPNVFTFNVVINALCKTGKMNKARDVMEDMKV-YGCSPNVVSYNTLIDGY 268
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 98/247 (39%), Gaps = 5/247 (2%)
Query: 46 TYTALLH-LYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
+Y +L++ L G K +E A + +++ + + N + YN ++ + +++ +
Sbjct: 333 SYNSLINGLCNGGKISE-AISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGS 391
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+K + VP YN+ I + ID +EM G D Y L+
Sbjct: 392 VKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEME-REGIVPDVGTYNCLIAGLCRNG 450
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
++ A+ L + S +T+ L+ Y G K + K + K Y
Sbjct: 451 NIEAAKK--LFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTY 508
Query: 225 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 284
++ Y G+LK + Q ++ ++++ N LL +S G E AN +L
Sbjct: 509 NIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEML 568
Query: 285 QKNCAPT 291
+K P
Sbjct: 569 EKGLVPN 575
>gi|297813013|ref|XP_002874390.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297320227|gb|EFH50649.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1027
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 104/244 (42%), Gaps = 24/244 (9%)
Query: 4 HKEFVLSDSDYATRIDLMTKVFGIHSGERYFE-----GLPLSAKTSETYTALLHLYAGAK 58
K L Y T I M + + +E G+P S +TY ++ +Y
Sbjct: 756 EKNMALDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSI---QTYNTMISVYGRGL 812
Query: 59 WTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYN 118
+KA E+F ++S L + +Y M+ Y G++ + + E+++K + P +YN
Sbjct: 813 QLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKAGKMSEALSLFSEMQKKGIKPGTPSYN 872
Query: 119 LWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAE 178
+ + CA + +V + L M +G + Y++L+ Y AESS EAE
Sbjct: 873 MVVKICATSRLHREVDELLQAME-RTGICTESSTYLSLIQAY--------AESSQFAEAE 923
Query: 179 KSIT--QRQWIT-----YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSY 231
K+IT Q + I + L+ +A G D+ ++I+ + S IL Y
Sbjct: 924 KTITLMQEKGIPLFHSHFSLLLSAFAKAGMMDEAERIYSKMSEAGISPDSACKRTILKGY 983
Query: 232 LMLG 235
+ G
Sbjct: 984 MSCG 987
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/233 (19%), Positives = 99/233 (42%), Gaps = 3/233 (1%)
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
+AE + + N++ + + YN ++ + G+++ + + E + V I TYN
Sbjct: 745 REAEHISRTCLEKNMALDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTM 804
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
IS L +D+ + SG D Y N++ Y A + A S E +K
Sbjct: 805 ISVYGRGLQLDKAIEIFSNAR-RSGLYLDEKIYTNMIMHYGKAGKMSEA-LSLFSEMQKK 862
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 240
+ +Y+ ++ + A ++D++ +++ T S Y+ ++ +Y E
Sbjct: 863 GIKPGTPSYNMVVKICATSRLHREVDELLQAMERTGICTESSTYLSLIQAYAESSQFAEA 922
Query: 241 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNA 293
+ I ++ F S + LL AF+ G+ ++A + + + +P +A
Sbjct: 923 EKTITLMQEKGIPLFH-SHFSLLLSAFAKAGMMDEAERIYSKMSEAGISPDSA 974
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 112/268 (41%), Gaps = 12/268 (4%)
Query: 17 RIDLMTKVF-----GIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVK 71
RI L T V+ + + EG+P TYT ++ YA + E+A F +K
Sbjct: 252 RIILSTSVYNFMLSSLQKNQMVEEGVP---PNEFTYTLVVSSYAKQGFKEEALWAFGEMK 308
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
+ Y+ ++ L + G ++ + E+++ + +VP +T +S T N
Sbjct: 309 SLGFIPEEVTYSSVIGLSVKAGDWDQAVGLYEDMRSRGIVPSNYTCASMLSLYYKTENYP 368
Query: 132 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 191
+ +M + +D+ ++ + ++ IY +A+S E E+ TY
Sbjct: 369 KALSLFADMERNKIPADEVIRGL-IIRIYGKLGLFHDAQS-IFEETERLNLLADEKTYLA 426
Query: 192 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 251
+ ++ GN K + + ++ ++ YI +L Y + ++ E S
Sbjct: 427 MSQVHLNSGNVVKALDVIEMMKTRDIPLSRFAYIVMLQCYAKIQNVDCAEEAFRAL--SN 484
Query: 252 TSDFDISACNRLLGAFSDVGLTEKANEF 279
T D S+CN +L ++ + L EKA F
Sbjct: 485 TGLPDASSCNDMLNLYTRLNLGEKAKGF 512
>gi|224124604|ref|XP_002319373.1| predicted protein [Populus trichocarpa]
gi|222857749|gb|EEE95296.1| predicted protein [Populus trichocarpa]
Length = 810
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 122/274 (44%), Gaps = 21/274 (7%)
Query: 20 LMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNA 79
L K F + G R P TY +L+ +++G ++A +L + ++++
Sbjct: 357 LYDKAFSLFKGMRNHGTWP----DEVTYNSLIQMFSGGDLMDQARDLLDEMQEAGFKPQC 412
Query: 80 LMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE 139
L ++ +M Y +GQ+ V +E+ + V P+ Y I+ A N+++ K+
Sbjct: 413 LTFSAVMACYARLGQLSDAVDVYQEMVKAGVKPNEVVYGSLINGFAEVGNVEEALKYFRM 472
Query: 140 MSCDSGGSDDWVKYVNLVNIYIT------ASHLVNAESSTLVEAEKSITQRQWITYDFLI 193
M +SG + + +L+ +Y A HL +E I I + +I
Sbjct: 473 ME-ESGIPANQIVLTSLIKVYSKLGCFDGAKHLYKKMKD--LEGGPDI-----IASNSMI 524
Query: 194 ILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATS 253
LYA LG + + ++K+LR Q ++ ++ Y +G L E +I ++ KQS
Sbjct: 525 SLYADLGMISEAELVFKNLRENGQA-DGVSFATMMYLYKSMGMLDEAIDIAEEMKQSGLL 583
Query: 254 DFDISACNRLLGAFSDVG-LTEKANEFHMLLLQK 286
D + N+++ ++ G L E A H ++ QK
Sbjct: 584 R-DCVSYNKVMACYATNGQLRECAELLHEMIGQK 616
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 49/88 (55%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
+ TY L+ LY A + A E+F + +S ++ + + +N M+ S G + + +++
Sbjct: 132 TSTYNTLIDLYGKAGRLKDAAEVFSEMLKSGVAMDTITFNTMIFTCGSHGLLSEAESLLD 191
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNID 131
+++ + + PD TYN+++S A NI+
Sbjct: 192 KMEERRISPDTRTYNIFLSLYADAGNIN 219
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 95/238 (39%), Gaps = 10/238 (4%)
Query: 43 TSETYTALLHLYA-GAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 101
+S+ A++ YA W E + + L YN M+ Y +K +
Sbjct: 305 SSKVRAAIIDAYAERGLWAEAEAVFYGKRDLLGPEKGVLEYNVMVKAYGKAKLYDKAFSL 364
Query: 102 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 161
+ ++ PD TYN I + +DQ + LDEM ++G + + ++ Y
Sbjct: 365 FKGMRNHGTWPDEVTYNSLIQMFSGGDLMDQARDLLDEMQ-EAGFKPQCLTFSAVMACYA 423
Query: 162 TASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 221
L +A E K+ + + Y LI +A +GN +++ K RM ++
Sbjct: 424 RLGQLSDA-VDVYQEMVKAGVKPNEVVYGSLINGFAEVGN---VEEALKYFRMMEESGIP 479
Query: 222 RNYICILS---SYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
N I + S Y LG + + K DI A N ++ ++D+G+ +A
Sbjct: 480 ANQIVLTSLIKVYSKLGCFDGAKHLYKKMKDLEGGP-DIIASNSMISLYADLGMISEA 536
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 45/77 (58%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
++ +++LY ++A ++ E +KQS L + + YN++M Y + GQ+ + A ++ E+
Sbjct: 553 SFATMMYLYKSMGMLDEAIDIAEEMKQSGLLRDCVSYNKVMACYATNGQLRECAELLHEM 612
Query: 106 KRKNVVPDIFTYNLWIS 122
+ ++PD T+ + +
Sbjct: 613 IGQKLLPDGGTFKILFT 629
>gi|242078641|ref|XP_002444089.1| hypothetical protein SORBIDRAFT_07g007540 [Sorghum bicolor]
gi|241940439|gb|EES13584.1| hypothetical protein SORBIDRAFT_07g007540 [Sorghum bicolor]
Length = 942
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 70/149 (46%), Gaps = 9/149 (6%)
Query: 14 YATRIDLMTKVFGIHSGERYFE-----GLPLSAKTSETYTALLHLYAGAKWTEKAEELFE 68
Y T I K HS + + G P+S E Y +L Y A E+ + +
Sbjct: 767 YNTIIAAYAKSGNFHSMNYFVQMMQDAGFPVS---PEAYNCMLDAYGKAGQLEEFASVLQ 823
Query: 69 RVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATL 128
++K++ F+ YN M+ +Y G +E V+ V+ E+K + VVPD+++YN I +
Sbjct: 824 KMKRAKCKFDHYTYNIMINIYGRRGWIEDVSNVLAELKDRGVVPDLYSYNTLIKAYGIAR 883
Query: 129 NIDQVKKFLDEMSCDSGGSDDWVKYVNLV 157
+ K + EM G S D V Y NL+
Sbjct: 884 MPEDAVKLMQEMRI-KGISPDRVTYANLI 911
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 120/278 (43%), Gaps = 7/278 (2%)
Query: 16 TRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELF-ERVKQ 72
T ID+ + + E + L SA + Y+ ++ +Y A+ E A + E KQ
Sbjct: 594 TMIDVFSMMKRFADAEAIYLELKASASVLDMIAYSVIVRMYIKAQRLEDACSILAEMEKQ 653
Query: 73 SNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQ 132
+ + ++ +M+ Y G +EK+A I++ V D YN I+ C + +D+
Sbjct: 654 KEIIPDKYLFLDMLRTYQKCGLLEKLADTYYWIRKSQVECDEAMYNCIINCCGRAIPVDE 713
Query: 133 VKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFL 192
+ + DEM G + V L++IY A AE ++ ++ + I+Y+ +
Sbjct: 714 LSRIFDEM-IQQGHLANTVTLNVLLDIYGKAGLFNRAEKVFIMARKQGLA--DIISYNTI 770
Query: 193 IILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSAT 252
I YA GN ++ + ++ ++ Y C+L +Y G L+E ++ + K+ A
Sbjct: 771 IAAYAKSGNFHSMNYFVQMMQDAGFPVSPEAYNCMLDAYGKAGQLEEFASVLQKMKR-AK 829
Query: 253 SDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
FD N ++ + G E + L + P
Sbjct: 830 CKFDHYTYNIMINIYGRRGWIEDVSNVLAELKDRGVVP 867
>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Vitis vinifera]
Length = 778
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 105/224 (46%), Gaps = 2/224 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L++ Y W ++A + E + Q+NL + YN ++ + G++E+ + +E+
Sbjct: 280 TYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEM 339
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ ++PD+ +YN I+ C I + K L+EMS + G + V + +V Y
Sbjct: 340 ENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMS-EKGVKPNAVTHNIMVKWYCKEGK 398
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ +A S+T+ + E+S +TY+ LI Y GN + + + KM S
Sbjct: 399 MDDA-SNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLN 457
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSD 269
IL + L+E +++ ++ ++S ++G F D
Sbjct: 458 TILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKD 501
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 91/203 (44%), Gaps = 6/203 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY +L A +L +K L N YN ++ Y +G +++ A V+E +
Sbjct: 245 TYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELM 304
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ N++PD++TYN+ I+ I++ K DEM + D V Y L+N + S
Sbjct: 305 TQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEME-NLKLLPDVVSYNTLINGCLEWSK 363
Query: 166 LVNAESSTLVE--AEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 223
+ +E+ L+E +EK + + +T++ ++ Y G D + +
Sbjct: 364 I--SEAFKLLEEMSEKGV-KPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVT 420
Query: 224 YICILSSYLMLGHLKEVGEIIDQ 246
Y +++ Y G++ E +D+
Sbjct: 421 YNTLINGYCKAGNMGEAFRTMDE 443
Score = 40.4 bits (93), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 49/247 (19%), Positives = 99/247 (40%), Gaps = 3/247 (1%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
S T +L K E+A +L ++ + + Y ++ Y G V++ + +
Sbjct: 453 SVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWD 512
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
E+K K ++P TYN I +Q L+E+ +SG D Y +++ Y
Sbjct: 513 EMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNEL-LESGLLPDETTYNTILHGYCRE 571
Query: 164 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 223
+ A E S + T + L+ G +K +++ + + + +
Sbjct: 572 GDVEKAFQFHNKMVENSF-KPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVT 630
Query: 224 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 283
Y +++S G L + ++ + ++ D N ++ A +D G +A EF +
Sbjct: 631 YNTLITSLCKEGRLDDAFNLLSEMEEKELGP-DHYTYNAIITALTDSGRIREAEEFMSKM 689
Query: 284 LQKNCAP 290
L+K P
Sbjct: 690 LEKGNLP 696
>gi|357502615|ref|XP_003621596.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496611|gb|AES77814.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 849
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 105/245 (42%), Gaps = 3/245 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY +LL + A E A++L + Q + +A YN + GQ++ V+EE+
Sbjct: 286 TYNSLLSVCASKGMWETAQKLLSEMDQKGIVRDAFTYNTYLDTLCKGGQIDLARRVLEEM 345
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ V P + TY+ I CA ++ +EM S S D V Y +V IY
Sbjct: 346 SSRRVWPTVVTYSTMIDGCAKANLLEDALNLYEEMKLRS-ISVDRVSYNTMVGIYAKLGR 404
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
A E E +R +TY+ L+ Y G D++ ++++ ++ + Y
Sbjct: 405 FDEA-IGQCKEMESCGMKRDVVTYNALLSGYGRYGMYDEVRRLFEEMKAWNIYPNTLTYS 463
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 285
++ Y G +E ++ +K+ A + D+ ++ + GL E + + +++
Sbjct: 464 TMIDVYTKGGMFQEAMDVYKDFKK-AQLEVDVVFYTSIIDSLCKNGLVESSIMLLIAMIE 522
Query: 286 KNCAP 290
K P
Sbjct: 523 KGIKP 527
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 86/187 (45%), Gaps = 8/187 (4%)
Query: 65 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 124
+ F+ + + + L YN ++++ S G E ++ E+ +K +V D FTYN ++ +
Sbjct: 270 KFFDEMLAEGIVPDRLTYNSLLSVCASKGMWETAQKLLSEMDQKGIVRDAFTYNTYLDTL 329
Query: 125 AATLNIDQVKKFLDEMSCDSGGSDDW---VKYVNLVNIYITASHLVNAESSTLVEAEKSI 181
ID ++ L+EMS W V Y +++ A+ L +A + +SI
Sbjct: 330 CKGGQIDLARRVLEEMSS----RRVWPTVVTYSTMIDGCAKANLLEDALNLYEEMKLRSI 385
Query: 182 TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVG 241
+ + ++Y+ ++ +YA LG D+ K + K Y +LS Y G EV
Sbjct: 386 SVDR-VSYNTMVGIYAKLGRFDEAIGQCKEMESCGMKRDVVTYNALLSGYGRYGMYDEVR 444
Query: 242 EIIDQWK 248
+ ++ K
Sbjct: 445 RLFEEMK 451
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 60/124 (48%), Gaps = 7/124 (5%)
Query: 17 RIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLS 76
+IDL +V S R + T TY+ ++ A A E A L+E +K ++S
Sbjct: 334 QIDLARRVLEEMSSRRVW-------PTVVTYSTMIDGCAKANLLEDALNLYEEMKLRSIS 386
Query: 77 FNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKF 136
+ + YN M+ +Y +G+ ++ +E++ + D+ TYN +S D+V++
Sbjct: 387 VDRVSYNTMVGIYAKLGRFDEAIGQCKEMESCGMKRDVVTYNALLSGYGRYGMYDEVRRL 446
Query: 137 LDEM 140
+EM
Sbjct: 447 FEEM 450
>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 606
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 97/202 (48%), Gaps = 4/202 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY +L++ + ++A ++F+ VK MYN ++ Y +G+++ + EE+
Sbjct: 368 TYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEM 427
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+R+ +VPD+ TYN I+ NI+ KK D+++ + G D V + L+ Y +
Sbjct: 428 EREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLT--NKGLPDLVTFHILMEGYCSRGE 485
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ-KMTSRNY 224
A + L E K + + +TY+ ++ Y GN + + ++ +M +Y
Sbjct: 486 SRKA-AMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASY 544
Query: 225 ICILSSYLMLGHLKEVGEIIDQ 246
+L Y G L++ ++++
Sbjct: 545 NVLLQGYSQKGKLEDANMLLNE 566
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 51/253 (20%), Positives = 97/253 (38%), Gaps = 17/253 (6%)
Query: 46 TYTALLH-LYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
TY +L++ L G K E A + +++ + + N + Y+ ++ + G +++ + +
Sbjct: 333 TYNSLINGLCNGGKINE-AIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDS 391
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+K + P YN+ I + ID +EM + V V N I
Sbjct: 392 VKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEME-----REGIVPDVGTYNCLIAGL 446
Query: 165 HLVNAESSTLVEAEKSITQ------RQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQK 218
+ + A+K Q +T+ L+ Y G K + K + K
Sbjct: 447 ----CRNGNIEAAKKLFDQLTNKGLPDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLK 502
Query: 219 MTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 278
Y ++ Y G+LK + Q ++ ++++ N LL +S G E AN
Sbjct: 503 PRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANM 562
Query: 279 FHMLLLQKNCAPT 291
+L+K P
Sbjct: 563 LLNEMLEKGLVPN 575
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 53/111 (47%), Gaps = 1/111 (0%)
Query: 50 LLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKN 109
L+ YA E E F+R +A+ +M + + V + +E+ R+
Sbjct: 159 LVLAYANNSRFELGFEAFKRSGYYGYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRRK 218
Query: 110 VVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
+ P++FT+N+ I++ T +++ + +++M G S + V Y L++ Y
Sbjct: 219 IQPNVFTFNVVINALCKTGKMNKARDVMEDMKV-YGYSPNVVSYNTLIDGY 268
>gi|242060656|ref|XP_002451617.1| hypothetical protein SORBIDRAFT_04g004710 [Sorghum bicolor]
gi|241931448|gb|EES04593.1| hypothetical protein SORBIDRAFT_04g004710 [Sorghum bicolor]
Length = 593
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 102/236 (43%), Gaps = 6/236 (2%)
Query: 36 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 95
GLP T+ Y A L A+ +EKA E+++R+K+ N Y M+ +Y Q
Sbjct: 230 GLP---PTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTETYTLMINVYGKAKQP 286
Query: 96 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 155
V E+K P+I TY +++ A ++ ++ +EM +G D Y
Sbjct: 287 MSSLKVFNEMKTIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQ-QAGHEPDVYAYNA 345
Query: 156 LVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMT 215
L+ Y A L S E + +Y+ L+ Y G + + ++ L+
Sbjct: 346 LMEAYSRAG-LPQGASEIFSLMEHMGCEPDRASYNILVDAYGRAGLHQEAEAAFQELKQQ 404
Query: 216 KQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 271
+ T ++++ +LS++ G++ E++ Q +S D A N +L A+ G
Sbjct: 405 GMRPTMKSHMLLLSAHAKSGNVARCEEVMAQLHKSGLRP-DTFALNAMLNAYGRAG 459
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 89/204 (43%), Gaps = 8/204 (3%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
+ETYT ++++Y AK + ++F +K N Y ++ + G EK V E
Sbjct: 270 TETYTLMINVYGKAKQPMSSLKVFNEMKTIGCKPNICTYTALVNAFAREGLCEKAEEVFE 329
Query: 104 EIKRKNVVPDIFTYNLWI---SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
E+++ PD++ YN + S ++ ++ M C+ D Y LV+ Y
Sbjct: 330 EMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEP----DRASYNILVDAY 385
Query: 161 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 220
A AE++ E ++ + ++ L+ +A GN + +++ L + +
Sbjct: 386 GRAGLHQEAEAA-FQELKQQGMRPTMKSHMLLLSAHAKSGNVARCEEVMAQLHKSGLRPD 444
Query: 221 SRNYICILSSYLMLGHLKEVGEII 244
+ +L++Y G L ++ ++
Sbjct: 445 TFALNAMLNAYGRAGRLDDMERLL 468
Score = 44.7 bits (104), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 46/248 (18%), Positives = 97/248 (39%), Gaps = 38/248 (15%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y L+ Y + KAE ++ + +++ Y ++ Y + GQ+ + V+ E++
Sbjct: 168 YNLLIDAYGQKRQLNKAESIYMALLEAHCVPTEDTYALLLRAYCNSGQLHRAEGVISEMQ 227
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
+ + P YN ++ L + C V +Y
Sbjct: 228 KNGLPPTATVYNAYLDG-------------LLKARCSE----------KAVEVY------ 258
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 226
++ E+ T + TY +I +Y +++ ++ K Y
Sbjct: 259 ------QRMKKERCRTNTE--TYTLMINVYGKAKQPMSSLKVFNEMKTIGCKPNICTYTA 310
Query: 227 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 286
+++++ G ++ E+ ++ +Q A + D+ A N L+ A+S GL + A+E L+
Sbjct: 311 LVNAFAREGLCEKAEEVFEEMQQ-AGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHM 369
Query: 287 NCAPTNAS 294
C P AS
Sbjct: 370 GCEPDRAS 377
>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
Length = 778
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 105/224 (46%), Gaps = 2/224 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L++ Y W ++A + E + Q+NL + YN ++ + G++E+ + +E+
Sbjct: 280 TYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEM 339
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ ++PD+ +YN I+ C I + K L+EMS + G + V + +V Y
Sbjct: 340 ENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMS-EKGVKPNAVTHNIMVKWYCKEGK 398
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ +A S+T+ + E+S +TY+ LI Y GN + + + KM S
Sbjct: 399 MDDA-SNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLN 457
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSD 269
IL + L+E +++ ++ ++S ++G F D
Sbjct: 458 TILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKD 501
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 91/203 (44%), Gaps = 6/203 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY +L A +L +K L N YN ++ Y +G +++ A V+E +
Sbjct: 245 TYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELM 304
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ N++PD++TYN+ I+ I++ K DEM + D V Y L+N + S
Sbjct: 305 TQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEME-NLKLLPDVVSYNTLINGCLEWSK 363
Query: 166 LVNAESSTLVE--AEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 223
+ +E+ L+E +EK + + +T++ ++ Y G D + +
Sbjct: 364 I--SEAFKLLEEMSEKGV-KPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVT 420
Query: 224 YICILSSYLMLGHLKEVGEIIDQ 246
Y +++ Y G++ E +D+
Sbjct: 421 YNTLINGYCKAGNMGEAFRTMDE 443
Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 49/247 (19%), Positives = 99/247 (40%), Gaps = 3/247 (1%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
S T +L K E+A +L ++ + + Y ++ Y G V++ + +
Sbjct: 453 SVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWD 512
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
E+K K ++P TYN I +Q L+E+ +SG D Y +++ Y
Sbjct: 513 EMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNEL-LESGLLPDETTYNTILHGYCRE 571
Query: 164 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 223
+ A E S + T + L+ G +K +++ + + + +
Sbjct: 572 GDVEKAFQFHNKMVENSF-KPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVT 630
Query: 224 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 283
Y +++S G L + ++ + ++ D N ++ A +D G +A EF +
Sbjct: 631 YNTLITSLCKEGRLDDAFNLLSEMEEKELGP-DHYTYNAIITALTDSGRIREAEEFMSKM 689
Query: 284 LQKNCAP 290
L+K P
Sbjct: 690 LEKGXLP 696
>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Brachypodium distachyon]
Length = 714
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 91/211 (43%), Gaps = 8/211 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY +L++ Y A ++A LF +K++ L L YN ++ Y +G +E + EE+
Sbjct: 372 TYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEM 431
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
++ +PD+ TY + ++ N+ V+ F DEM G D Y ++ +T
Sbjct: 432 TEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEM-LSKGLEPDCFAYNTRISAELTIGA 490
Query: 166 LVNA---ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 222
+ NA ++ S T +TY+ LI G+ +W + ++
Sbjct: 491 ITNAFQLREEMMLRGISSDT----VTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCV 546
Query: 223 NYICILSSYLMLGHLKEVGEIIDQWKQSATS 253
Y C++ ++ G L E I D S S
Sbjct: 547 TYTCLIHAHCERGRLIEAKNIFDGMVASGLS 577
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 90/189 (47%), Gaps = 10/189 (5%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY +++ A EKA +L + ++ S + +A YN ++T ++ VEK ++ E+
Sbjct: 268 TYNVVINGLARKGELEKAAQLVDIMRLSKKA-SAFTYNPLITGLLARDFVEKAGALLLEM 326
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ + +VP + TYN I T N + + DEM G D + Y +L+N Y A +
Sbjct: 327 ENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRA-KGLLPDLITYNSLINGYCKAGN 385
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
L A + +++ +TY+ LI Y LG+ + R K++MT + +
Sbjct: 386 LKQA-LCLFGDLKRAGLGPTVLTYNILIDGYCRLGD-------LEGARRLKEEMTEEDCL 437
Query: 226 CILSSYLML 234
+ +Y +L
Sbjct: 438 PDVCTYTIL 446
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 1/95 (1%)
Query: 39 LSAKTSE-TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 97
LS K S TY L+ + EKA L ++ + + YN ++ G E
Sbjct: 294 LSKKASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEA 353
Query: 98 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQ 132
+ +E++ K ++PD+ TYN I+ N+ Q
Sbjct: 354 AQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQ 388
Score = 37.4 bits (85), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 12/120 (10%)
Query: 17 RIDLMTKVFGIHS---------GERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEE 65
R+D +T IH+ + F+G+ S + TYT +H Y A
Sbjct: 542 RLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYG 601
Query: 66 LFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI-SSC 124
F ++ + + N + YN +M +G+ E E+ + +VP+ +TY L I SC
Sbjct: 602 WFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSC 661
>gi|422294671|gb|EKU21971.1| hypothetical protein NGA_2006000, partial [Nannochloropsis gaditana
CCMP526]
Length = 472
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 93/227 (40%), Gaps = 11/227 (4%)
Query: 73 SNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQ 132
NL NA+ YN ++T Y + G + V++ + + + PD +T+N I++ A +
Sbjct: 17 GNLKPNAITYNSLLTAYTNAGDMAGAQQVLKRMVQAGLSPDTYTFNTLIAAFVARREVRA 76
Query: 133 VKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFL 192
+K + M + G D V Y L+ Y T + L + TY++L
Sbjct: 77 AEKMVAYMQ-EHGVLADVVTYSQLLQGYATKEGDMGKAEEVLERMARDGVAPNSYTYNYL 135
Query: 193 IILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSAT 252
I Y G D + + + +R TS NY ++ +Y + +I+D+ K+
Sbjct: 136 IEGYVKAGEMDWAEDVLERMRTVGLAPTSMNYCVLMDAYTRRRDARGAEKILDRMKKEGV 195
Query: 253 SDFDISACNRLLGAFSDVGLTEKANEFHMLLL---------QKNCAP 290
++ L+ A++ G E A +L K+C P
Sbjct: 196 Q-ANVQVFTTLMNAYAKRGDVEGAEGVLARMLAVAEEEGGGSKDCEP 241
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY+ L+++YA A AE + R+ + + N + + +MT Y G E LV++ +
Sbjct: 245 TYSTLMNVYARAGLAAGAEGVLTRMTAAGWAPNVITFTTLMTAYSRAGDPEGAELVLKRM 304
Query: 106 KRKNVVPDIFTYNLWISSCA 125
+ V P++ TYN +S+ +
Sbjct: 305 EAAGVSPNVLTYNTLLSATS 324
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 103/238 (43%), Gaps = 11/238 (4%)
Query: 46 TYTALLHLYAGAKW-TEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
TY+ LL YA + KAEE+ ER+ + ++ N+ YN ++ Y+ G+++ V+E
Sbjct: 95 TYSQLLQGYATKEGDMGKAEEVLERMARDGVAPNSYTYNYLIEGYVKAGEMDWAEDVLER 154
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
++ + P Y + + + + +K LD M + ++ V + L+N Y
Sbjct: 155 MRTVGLAPTSMNYCVLMDAYTRRRDARGAEKILDRMKKEGVQANVQV-FTTLMNAYAKRG 213
Query: 165 HLVNAE---SSTLVEAEKSIT-----QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 216
+ AE + L AE+ + TY L+ +YA G + + +
Sbjct: 214 DVEGAEGVLARMLAVAEEEGGGSKDCEPNVHTYSTLMNVYARAGLAAGAEGVLTRMTAAG 273
Query: 217 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTE 274
+ ++++Y G E E++ + ++A ++ N LL A S +GL E
Sbjct: 274 WAPNVITFTTLMTAYSRAGD-PEGAELVLKRMEAAGVSPNVLTYNTLLSATSRMGLRE 330
Score = 44.3 bits (103), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 95/228 (41%), Gaps = 19/228 (8%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
A S TY L+ Y A + AE++ ER++ L+ ++ Y +M Y
Sbjct: 126 APNSYTYNYLIEGYVKAGEMDWAEDVLERMRTVGLAPTSMNYCVLMDAYTRRRDARGAEK 185
Query: 101 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC----DSGGSDDWVK---- 152
+++ +K++ V ++ + +++ A +++ + L M + GGS D
Sbjct: 186 ILDRMKKEGVQANVQVFTTLMNAYAKRGDVEGAEGVLARMLAVAEEEGGGSKDCEPNVHT 245
Query: 153 YVNLVNIYITASHLVNAESSTLVEAEKSITQRQW----ITYDFLIILYAGLGNKDKIDQI 208
Y L+N+Y A AE +T W IT+ L+ Y+ G+ + + +
Sbjct: 246 YSTLMNVYARAGLAAGAEGVLT-----RMTAAGWAPNVITFTTLMTAYSRAGDPEGAELV 300
Query: 209 WKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFD 256
K + Y +LS+ +G L+E GE+ ++ + +D
Sbjct: 301 LKRMEAAGVSPNVLTYNTLLSATSRMG-LRE-GEVEERRAKRVLQVYD 346
>gi|168055632|ref|XP_001779828.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668740|gb|EDQ55341.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 730
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 105/217 (48%), Gaps = 6/217 (2%)
Query: 35 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 94
EG PL YT+L+ + + ++A FE++K++ + + YN ++ LY G+
Sbjct: 111 EGYPLDVYA---YTSLISALSRNRKFKEALGFFEQMKEAGPQPSLVTYNVIIDLYGKKGR 167
Query: 95 V-EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKY 153
E + + EE+K + + PD +TYN I++CA+ ++ + +M S + D V Y
Sbjct: 168 SWENILELFEEMKAQGIQPDEYTYNTAITACASGSLCEEATELFTQMK-SSNCTPDRVTY 226
Query: 154 VNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 213
L+++Y A N ++ L E E + +TY+ L+ + G + ++ S+
Sbjct: 227 NALLDVYGKAG-WYNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEMKDSMV 285
Query: 214 MTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQS 250
+ Y +LS+Y G +++ EI +Q + S
Sbjct: 286 SKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTS 322
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 108/245 (44%), Gaps = 3/245 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY + A E+A ELF ++K SN + + + YN ++ +Y G + A V++E+
Sbjct: 190 TYNTAITACASGSLCEEATELFTQMKSSNCTPDRVTYNALLDVYGKAGWYNEAANVLKEM 249
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ +P+I TYN +S+ + + D M G D Y +L++ Y A
Sbjct: 250 ESAGCLPNIVTYNELLSAFGRAGLCNAAAEMKDSM-VSKGIEPDVFTYTSLLSAYSRAGK 308
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ A + S T++ LI ++ N ++ I++ ++ + +
Sbjct: 309 VEQA-MEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVIFEDMQACGVEPDIVTWN 367
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 285
+L ++ G EV ++ K+ A + D + N L+ A+ G +++A + +LQ
Sbjct: 368 SLLGAFGKNGMYSEVLKVFRGMKK-AGFEPDKATFNILIEAYGRCGSSDQALSIYDGMLQ 426
Query: 286 KNCAP 290
C P
Sbjct: 427 AGCTP 431
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 75/181 (41%), Gaps = 2/181 (1%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
+ T+ A++ +Y +KA + F ++ + L + + YN +M +Y G K +
Sbjct: 538 TSTFNAMISMYGKKGMMDKATDTFALLRSTGLEPDVVTYNCLMGMYGREGMYRKCEATLR 597
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
E PD+ +YN I S + + + EM +G D Y V Y+
Sbjct: 598 ECMAAGQTPDLVSYNTVIFSYSKHGQLSSATRIFHEM-VSNGIQPDSFTYNTFVGCYVNG 656
Query: 164 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 223
A S + K+ + +TY L+ Y +G +++++I K ++ + +
Sbjct: 657 GMFPEA-LSVVKHMHKTGCKPDEVTYRTLVDAYCKIGKFEEVERILKFIKSSDPNFSKAA 715
Query: 224 Y 224
Y
Sbjct: 716 Y 716
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 94/231 (40%), Gaps = 10/231 (4%)
Query: 46 TYTALLHLYA--GAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
TY ++ LY G W E ELFE +K + + YN +T S E+ +
Sbjct: 154 TYNVIIDLYGKKGRSW-ENILELFEEMKAQGIQPDEYTYNTAITACASGSLCEEATELFT 212
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
++K N PD TYN + ++ L EM +G + V Y L++ + A
Sbjct: 213 QMKSSNCTPDRVTYNALLDVYGKAGWYNEAANVLKEME-SAGCLPNIVTYNELLSAFGRA 271
Query: 164 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 223
L NA + + TY L+ Y+ G ++ +I+ +R + S
Sbjct: 272 G-LCNAAAEMKDSMVSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFT 330
Query: 224 YICILSSYLMLGHLKEVGE--IIDQWKQSATSDFDISACNRLLGAFSDVGL 272
+ ++ M G K E +I + Q+ + DI N LLGAF G+
Sbjct: 331 FNALIG---MHGKNKNFSEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNGM 378
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/235 (19%), Positives = 104/235 (44%), Gaps = 11/235 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY ALL +Y A W +A + + ++ + N + YNE+++ + G A + + +
Sbjct: 225 TYNALLDVYGKAGWYNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEMKDSM 284
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K + PD+FTY +S+ + ++Q + ++M S + + + L+ + H
Sbjct: 285 VSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMR-TSNCTPNSFTFNALIGM-----H 338
Query: 166 LVNAESSTLV----EAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 221
N S ++ + + + +T++ L+ + G ++ ++++ ++ +
Sbjct: 339 GKNKNFSEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDK 398
Query: 222 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
+ ++ +Y G + I D Q+ + D++ N LL A + G E A
Sbjct: 399 ATFNILIEAYGRCGSSDQALSIYDGMLQAGCTP-DLATFNTLLAALAREGRWEHA 452
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 44/220 (20%), Positives = 90/220 (40%), Gaps = 3/220 (1%)
Query: 53 LYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVP 112
+Y+ ++AE+ F ++ + +N M+++Y G ++K ++ + P
Sbjct: 512 VYSKCSLVDEAEDAFLAMRHHGYLSDTSTFNAMISMYGKKGMMDKATDTFALLRSTGLEP 571
Query: 113 DIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESS 172
D+ TYN + + + L E +G + D V Y ++ Y L +A +
Sbjct: 572 DVVTYNCLMGMYGREGMYRKCEATLRECMA-AGQTPDLVSYNTVIFSYSKHGQLSSA-TR 629
Query: 173 TLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYL 232
E + Q TY+ + Y G + + K + T K Y ++ +Y
Sbjct: 630 IFHEMVSNGIQPDSFTYNTFVGCYVNGGMFPEALSVVKHMHKTGCKPDEVTYRTLVDAYC 689
Query: 233 MLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGL 272
+G +EV I+ ++ +S+ +F +A R+ D L
Sbjct: 690 KIGKFEEVERIL-KFIKSSDPNFSKAAYRRIAARVDDYDL 728
Score = 43.9 bits (102), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 109/282 (38%), Gaps = 42/282 (14%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSN-----LSFNALM--------YNEMMTLYMSV 92
TYT+LL Y+ A E+A E++ +++ SN +FNAL+ ++EMM ++ +
Sbjct: 295 TYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVIFEDM 354
Query: 93 ----------------------GQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 130
G +V V +K+ PD T+N+ I + +
Sbjct: 355 QACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRCGSS 414
Query: 131 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 190
DQ D M +G + D + L+ +AE L E +S + I Y
Sbjct: 415 DQALSIYDGM-LQAGCTPDLATFNTLLAALAREGRWEHAE-LILDELNRSSYKPNDIAYA 472
Query: 191 FLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQS 250
++ YA G +K+ ++ +L T I + + L+ V E D +
Sbjct: 473 SMLHAYANGGELEKLKEMVDTLHTIYVPFTK---ILLKTFVLVYSKCSLVDEAEDAFLAM 529
Query: 251 ATSDF--DISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
+ D S N ++ + G+ +KA + LL P
Sbjct: 530 RHHGYLSDTSTFNAMISMYGKKGMMDKATDTFALLRSTGLEP 571
>gi|357449339|ref|XP_003594946.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359380|gb|ABN05846.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355483994|gb|AES65197.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 849
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 113/239 (47%), Gaps = 9/239 (3%)
Query: 18 IDLMTKVFGIHS----GERYFEGLPLSAKT--SETYTALLHLYAGAKWTEKAEELFERVK 71
++ M K+ G S + F+ +P+ + + T +LH YA ++A E+FE++K
Sbjct: 205 VEFMVKMLGRESQYSIASKLFDIIPVEEYSLDVKACTTVLHAYARTGKYKRAIEIFEKMK 264
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVAL-VVEEIKRKNVVPDIFTYNLWISSCAATLNI 130
++ L + YN M+ +Y +G+ + L +++E++ K + D FT IS+C +
Sbjct: 265 ETGLDPTLVTYNVMLDVYGKMGRAWSMILELLDEMRSKGLEFDEFTCTTVISACGREGIL 324
Query: 131 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 190
D+ ++F D++ + G Y +++ ++ A A + L E E + + ITY+
Sbjct: 325 DEARRFFDDLKLN-GYKPGTATYNSMLQVFGKAGVYTEA-LNILKEMEDNNCEPDAITYN 382
Query: 191 FLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQ 249
L+ Y G D+ + ++ + Y ++++Y G + E+ Q K+
Sbjct: 383 ELVAAYVRAGFHDEGAAVIDTMASKGVMPNAITYTTVINAYGKAGDADKALEVFGQMKE 441
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/270 (17%), Positives = 118/270 (43%), Gaps = 5/270 (1%)
Query: 27 IHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNE 84
+ R+F+ L L+ + TY ++L ++ A +A + + ++ +N +A+ YNE
Sbjct: 324 LDEARRFFDDLKLNGYKPGTATYNSMLQVFGKAGVYTEALNILKEMEDNNCEPDAITYNE 383
Query: 85 MMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS 144
++ Y+ G ++ A V++ + K V+P+ TY I++ + D+ + +M +
Sbjct: 384 LVAAYVRAGFHDEGAAVIDTMASKGVMPNAITYTTVINAYGKAGDADKALEVFGQMK-EL 442
Query: 145 GGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDK 204
G + Y N++ + + L + + + IT++ ++ + G +
Sbjct: 443 GCVPNVCTYNNVL-VLLGKRSRSEDMIKILCDMKLNGCPPDRITWNTMLAVCGEKGKQKF 501
Query: 205 IDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLL 264
+ Q+ + ++ + + ++S+Y G +V ++ + + + I+ N LL
Sbjct: 502 VSQVLREMKNCGFEPDKETFNTLISAYGRCGSEVDVAKMYGEMVAAGFTPC-ITTYNALL 560
Query: 265 GAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
A + G + A + + +K P S
Sbjct: 561 NALARRGNWKAAESVVLDMRKKGFKPNETS 590
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 48/96 (50%)
Query: 49 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 108
++L ++ + EKA E+ + + S L N + YN ++ LY VG K ++++I+
Sbjct: 663 SMLSMFVRNQKLEKAHEMLDVIHVSGLQPNLVTYNSLIDLYARVGDCWKAEEMLKDIQNS 722
Query: 109 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS 144
+ PD+ +YN I + + + L EM+ +
Sbjct: 723 GISPDVVSYNTVIKGFCKKGLVQEAIRILSEMTANG 758
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 51/100 (51%), Gaps = 3/100 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY +L+ LYA KAEE+ + ++ S +S + + YN ++ + G V++ ++ E+
Sbjct: 695 TYNSLIDLYARVGDCWKAEEMLKDIQNSGISPDVVSYNTVIKGFCKKGLVQEAIRILSEM 754
Query: 106 KRKNVVPDIFTYNLWISSCAAT---LNIDQVKKFLDEMSC 142
V P T+N ++S A D+V +++ E C
Sbjct: 755 TANGVQPCPITFNTFMSCYAGNGLFAEADEVIRYMIEHGC 794
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 48/245 (19%), Positives = 104/245 (42%), Gaps = 3/245 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY ALL+ A + AE + +++ N Y+ ++ Y G V + V EI
Sbjct: 555 TYNALLNALARRGNWKAAESVVLDMRKKGFKPNETSYSLLLHCYSKAGNVRGLEKVEMEI 614
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+V P + + + +++ ++ ++G D V +++++++
Sbjct: 615 YDGHVFPSWMLLRTLVLTNYKCRQLKGMERAFHQLQ-NNGYKLDMVVINSMLSMFVRNQK 673
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
L A L S Q +TY+ LI LYA +G+ K +++ K ++ + +Y
Sbjct: 674 LEKAH-EMLDVIHVSGLQPNLVTYNSLIDLYARVGDCWKAEEMLKDIQNSGISPDVVSYN 732
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 285
++ + G ++E I+ + + I+ N + ++ GL +A+E +++
Sbjct: 733 TVIKGFCKKGLVQEAIRILSEMTANGVQPCPITF-NTFMSCYAGNGLFAEADEVIRYMIE 791
Query: 286 KNCAP 290
C P
Sbjct: 792 HGCMP 796
Score = 40.8 bits (94), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 89/200 (44%), Gaps = 3/200 (1%)
Query: 64 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 123
E F +++ + + ++ N M+++++ ++EK +++ I + P++ TYN I
Sbjct: 643 ERAFHQLQNNGYKLDMVVINSMLSMFVRNQKLEKAHEMLDVIHVSGLQPNLVTYNSLIDL 702
Query: 124 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQ 183
A + + ++ L ++ +SG S D V Y ++ + LV L E + Q
Sbjct: 703 YARVGDCWKAEEMLKDIQ-NSGISPDVVSYNTVIKGFCKKG-LVQEAIRILSEMTANGVQ 760
Query: 184 RQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI 243
IT++ + YAG G + D++ + + Y ++ Y+ KE +
Sbjct: 761 PCPITFNTFMSCYAGNGLFAEADEVIRYMIEHGCMPNELTYKIVIDGYIKAKKHKEAMDF 820
Query: 244 IDQWKQSATSDFDISACNRL 263
+ + K+ S FD + +L
Sbjct: 821 VSKIKEIDIS-FDDQSLKKL 839
>gi|387219093|gb|AFJ69255.1| hypothetical protein NGATSA_2006000, partial [Nannochloropsis
gaditana CCMP526]
Length = 479
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 93/227 (40%), Gaps = 11/227 (4%)
Query: 73 SNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQ 132
NL NA+ YN ++T Y + G + V++ + + + PD +T+N I++ A +
Sbjct: 24 GNLKPNAITYNSLLTAYTNAGDMAGAQQVLKRMVQAGLSPDTYTFNTLIAAFVARREVRA 83
Query: 133 VKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFL 192
+K + M + G D V Y L+ Y T + L + TY++L
Sbjct: 84 AEKMVAYMQ-EHGVLADVVTYSQLLQGYATKEGDMGKAEEVLERMARDGVAPNSYTYNYL 142
Query: 193 IILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSAT 252
I Y G D + + + +R TS NY ++ +Y + +I+D+ K+
Sbjct: 143 IEGYVKAGEMDWAEDVLERMRTVGLAPTSMNYCVLMDAYTRRRDARGAEKILDRMKKEGV 202
Query: 253 SDFDISACNRLLGAFSDVGLTEKANEFHMLLL---------QKNCAP 290
++ L+ A++ G E A +L K+C P
Sbjct: 203 Q-ANVQVFTTLMNAYAKRGDVEGAEGVLARMLAVAEEEGGGSKDCEP 248
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY+ L+++YA A AE + R+ + + N + + +MT Y G E LV++ +
Sbjct: 252 TYSTLMNVYARAGLAAGAEGVLTRMTAAGWAPNVITFTTLMTAYSRAGDPEGAELVLKRM 311
Query: 106 KRKNVVPDIFTYNLWISSCA 125
+ V P++ TYN +S+ +
Sbjct: 312 EAAGVSPNVLTYNTLLSATS 331
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 103/238 (43%), Gaps = 11/238 (4%)
Query: 46 TYTALLHLYAGAKW-TEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
TY+ LL YA + KAEE+ ER+ + ++ N+ YN ++ Y+ G+++ V+E
Sbjct: 102 TYSQLLQGYATKEGDMGKAEEVLERMARDGVAPNSYTYNYLIEGYVKAGEMDWAEDVLER 161
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
++ + P Y + + + + +K LD M + ++ V + L+N Y
Sbjct: 162 MRTVGLAPTSMNYCVLMDAYTRRRDARGAEKILDRMKKEGVQANVQV-FTTLMNAYAKRG 220
Query: 165 HLVNAE---SSTLVEAEKSIT-----QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 216
+ AE + L AE+ + TY L+ +YA G + + +
Sbjct: 221 DVEGAEGVLARMLAVAEEEGGGSKDCEPNVHTYSTLMNVYARAGLAAGAEGVLTRMTAAG 280
Query: 217 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTE 274
+ ++++Y G E E++ + ++A ++ N LL A S +GL E
Sbjct: 281 WAPNVITFTTLMTAYSRAGD-PEGAELVLKRMEAAGVSPNVLTYNTLLSATSRMGLRE 337
Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 95/228 (41%), Gaps = 19/228 (8%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
A S TY L+ Y A + AE++ ER++ L+ ++ Y +M Y
Sbjct: 133 APNSYTYNYLIEGYVKAGEMDWAEDVLERMRTVGLAPTSMNYCVLMDAYTRRRDARGAEK 192
Query: 101 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC----DSGGSDDWVK---- 152
+++ +K++ V ++ + +++ A +++ + L M + GGS D
Sbjct: 193 ILDRMKKEGVQANVQVFTTLMNAYAKRGDVEGAEGVLARMLAVAEEEGGGSKDCEPNVHT 252
Query: 153 YVNLVNIYITASHLVNAESSTLVEAEKSITQRQW----ITYDFLIILYAGLGNKDKIDQI 208
Y L+N+Y A AE +T W IT+ L+ Y+ G+ + + +
Sbjct: 253 YSTLMNVYARAGLAAGAEGVLT-----RMTAAGWAPNVITFTTLMTAYSRAGDPEGAELV 307
Query: 209 WKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFD 256
K + Y +LS+ +G L+E GE+ ++ + +D
Sbjct: 308 LKRMEAAGVSPNVLTYNTLLSATSRMG-LRE-GEVEERRAKRVLQVYD 353
>gi|254939549|ref|NP_001157212.1| pentatricopeptide repeat10 [Zea mays]
gi|218684531|gb|ACL01094.1| chloroplast pentatricopeptide repeat protein 10 [Zea mays]
gi|223948163|gb|ACN28165.1| unknown [Zea mays]
gi|413943497|gb|AFW76146.1| pentatricopeptide repeat10 [Zea mays]
Length = 786
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 102/215 (47%), Gaps = 3/215 (1%)
Query: 38 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV-E 96
P S YT +LH + A E+A ELF +++ ++ + YN ++ +Y +G+
Sbjct: 168 PGSRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWP 227
Query: 97 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 156
++ +++E++ V PD FT + I++C +D+ F +++ G + V Y L
Sbjct: 228 RIVALLDEMRAAGVEPDGFTASTVIAACCRDGLVDEAVAFFEDLKA-RGHAPCVVTYNAL 286
Query: 157 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 216
+ ++ A + A L E E++ Q +TY+ L YA G ++ + ++
Sbjct: 287 LQVFGKAGNYTEA-LRVLGEMEQNGCQPDAVTYNELAGTYARAGFFEEAARCLDTMASKG 345
Query: 217 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 251
+ Y ++++Y +G + E + DQ K++
Sbjct: 346 LLPNAFTYNTVMTAYGNVGKVDEALALFDQMKKTG 380
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 88/194 (45%), Gaps = 25/194 (12%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L YA A + E+A + + L NA YN +MT Y +VG+V++ + +++
Sbjct: 317 TYNELAGTYARAGFFEEAARCLDTMASKGLLPNAFTYNTVMTAYGNVGKVDEALALFDQM 376
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI------ 159
K+ VP++ TYNL + + + L EMS SG + + V + ++ +
Sbjct: 377 KKTGFVPNVNTYNLVLGMLGKKSRFTVMLEMLGEMS-RSGCTPNRVTWNTMLAVCGKRGM 435
Query: 160 --YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 217
Y+T ++ S VE + TY+ LI Y G++ +++
Sbjct: 436 EDYVT--RVLEGMRSCGVELSRD-------TYNTLIAAYGRCGSRTNAFKMY-------N 479
Query: 218 KMTSRNYICILSSY 231
+MTS + +++Y
Sbjct: 480 EMTSAGFTPCITTY 493
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/196 (20%), Positives = 87/196 (44%), Gaps = 14/196 (7%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY ALL ++ A +A + ++Q+ +A+ YNE+ Y G E+ A ++ +
Sbjct: 282 TYNALLQVFGKAGNYTEALRVLGEMEQNGCQPDAVTYNELAGTYARAGFFEEAARCLDTM 341
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K ++P+ FTYN +++ +D+ D+M +V VN Y
Sbjct: 342 ASKGLLPNAFTYNTVMTAYGNVGKVDEALALFDQMK--------KTGFVPNVNTYNLVLG 393
Query: 166 LVNAES------STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 219
++ +S L E +S +T++ ++ + G +D + ++ + +R ++
Sbjct: 394 MLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLEGMRSCGVEL 453
Query: 220 TSRNYICILSSYLMLG 235
+ Y ++++Y G
Sbjct: 454 SRDTYNTLIAAYGRCG 469
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 59/136 (43%), Gaps = 1/136 (0%)
Query: 64 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 123
E F+ VK + + +++N M+++Y G K V + IKR + PD+ TYN +
Sbjct: 581 ETAFQEVKARGYNPDLVIFNSMLSIYAKNGMYSKATEVFDSIKRSGLSPDLITYNSLMDM 640
Query: 124 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQ 183
A + +K L+++ C D V Y ++N + LV L E
Sbjct: 641 YAKCSESWEAEKILNQLKCSQTMKPDVVSYNTVINGFCKQG-LVKEAQRVLSEMVADGMA 699
Query: 184 RQWITYDFLIILYAGL 199
+TY L+ Y+ L
Sbjct: 700 PCAVTYHTLVGGYSSL 715
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 59/115 (51%), Gaps = 2/115 (1%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
+ ++L +YA KA E+F+ +K+S LS + + YN +M +Y + + ++ ++K
Sbjct: 599 FNSMLSIYAKNGMYSKATEVFDSIKRSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLK 658
Query: 107 -RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
+ + PD+ +YN I+ + + ++ L EM D G + V Y LV Y
Sbjct: 659 CSQTMKPDVVSYNTVINGFCKQGLVKEAQRVLSEMVAD-GMAPCAVTYHTLVGGY 712
Score = 43.5 bits (101), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 44/248 (17%), Positives = 96/248 (38%), Gaps = 1/248 (0%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 102
+ +TY L+ Y A +++ + + + YN ++ + G +V
Sbjct: 454 SRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFTPCITTYNALLNVLSRQGDWSTAQSIV 513
Query: 103 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 162
+++ K P+ +Y+L + A N+ + +E+ WV LV
Sbjct: 514 SKMRTKGFKPNEQSYSLLLQCYAKGGNVAGIAAIENEVYGSGAVFPSWVILRTLVIANFK 573
Query: 163 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 222
L E++ E + + ++ ++ +YA G K +++ S++ +
Sbjct: 574 CRRLDGMETA-FQEVKARGYNPDLVIFNSMLSIYAKNGMYSKATEVFDSIKRSGLSPDLI 632
Query: 223 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 282
Y ++ Y E +I++Q K S T D+ + N ++ F GL ++A
Sbjct: 633 TYNSLMDMYAKCSESWEAEKILNQLKCSQTMKPDVVSYNTVINGFCKQGLVKEAQRVLSE 692
Query: 283 LLQKNCAP 290
++ AP
Sbjct: 693 MVADGMAP 700
>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
Length = 782
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 81/183 (44%), Gaps = 6/183 (3%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLH-LYAGAKWTEKAEELFERV 70
Y T ID++ K + YFE + T YT+L+H L KW +KAEEL +
Sbjct: 414 YGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKW-DKAEELILEM 472
Query: 71 KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 130
+ N + +N ++ + G+V + + + + R V PDI TYN I C +
Sbjct: 473 LDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKM 532
Query: 131 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 190
D+ K L M G D V Y L+N Y S + +A + E S ITY+
Sbjct: 533 DEATKLLASM-VSVGVKPDIVTYGTLINGYCRVSRMDDA-LALFKEMVSSGVSPNIITYN 590
Query: 191 FLI 193
++
Sbjct: 591 IIL 593
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 80/181 (44%), Gaps = 5/181 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY++++ A+ +KA E+ + ++ + + + YN ++ Y S GQ ++ ++++
Sbjct: 238 TYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKM 297
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ V P++ TY+ ++ + +K D M+ G D Y L+ Y T
Sbjct: 298 RSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMT-KRGLEPDIATYRTLLQGYATKGA 356
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
LV + + I Q ++ LI YA ++K+DQ +Q + N +
Sbjct: 357 LVEMHALLDLMVRNGI-QPDHHVFNILICAYA---KQEKVDQAMLVFSKMRQHGLNPNVV 412
Query: 226 C 226
C
Sbjct: 413 C 413
>gi|414887392|tpg|DAA63406.1| TPA: hypothetical protein ZEAMMB73_124662 [Zea mays]
Length = 795
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 115/249 (46%), Gaps = 11/249 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+ +LL +Y A+ E+A + +R++ + + + + YN +++ Y+ G +E+ + +E+
Sbjct: 292 TFNSLLDVYGKARKHEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEM 351
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ + + PD+ TY IS ID EM +G S + Y L+ + H
Sbjct: 352 EFRGMKPDVVTYTTLISGLDRVGKIDAALATYSEM-VRNGCSPNLCTYNALIKL-----H 405
Query: 166 LVNAESSTLVEAEKSITQRQW----ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 221
V + + ++ + + +T++ L+ ++ G ++ ++K ++
Sbjct: 406 GVRGKFTEMMAVFDDLRSAGYVPDVVTWNTLLSVFGQNGLDSEVSGVFKEMKKAGYIPER 465
Query: 222 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 281
Y+ ++SSY G + EI + ++ DIS N +L A + G E+A +
Sbjct: 466 DTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYP-DISTYNAVLSALARGGRWEQAEKLFA 524
Query: 282 LLLQKNCAP 290
++ ++C P
Sbjct: 525 EMVDRDCKP 533
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 57/113 (50%), Gaps = 1/113 (0%)
Query: 49 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 108
A++ +Y K +K EE+ + +++++ +A YN +M +Y +G EK ++ EIK
Sbjct: 610 AMVSIYGKNKMVKKVEEVLSLMMENSINHSAATYNSLMHMYSRLGDCEKCESILTEIKSS 669
Query: 109 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 161
+ PD ++YN I + + + + EM C SG D V Y + Y+
Sbjct: 670 GMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKC-SGVKPDIVTYNIFIKSYV 721
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 50/90 (55%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 102
++ TY +L+H+Y+ EK E + +K S + + YN ++ Y GQ+++ + +
Sbjct: 639 SAATYNSLMHMYSRLGDCEKCESILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLF 698
Query: 103 EEIKRKNVVPDIFTYNLWISSCAATLNIDQ 132
E+K V PDI TYN++I S A + ++
Sbjct: 699 SEMKCSGVKPDIVTYNIFIKSYVANIMFEE 728
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 114/253 (45%), Gaps = 19/253 (7%)
Query: 46 TYTALLHLYA-GAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVA----- 99
TY A+L A G +W E+AE+LF + + + L Y+ ++ Y + +++K+
Sbjct: 502 TYNAVLSALARGGRW-EQAEKLFAEMVDRDCKPDELSYSSLLHAYANAKKLDKMKTLSED 560
Query: 100 LVVEEIKRKN-VVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN-LV 157
+ E I+R N +V + N ++ N+ + +K E+ D + +N +V
Sbjct: 561 IYAERIERHNWLVKTLVLVNNKVN------NLPETEKAFQELRRRRCSLD--INVLNAMV 612
Query: 158 NIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 217
+IY + E + E SI TY+ L+ +Y+ LG+ +K + I ++ +
Sbjct: 613 SIYGKNKMVKKVEEVLSLMMENSINH-SAATYNSLMHMYSRLGDCEKCESILTEIKSSGM 671
Query: 218 KMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 277
+ +Y ++ +Y G +KE + + K S DI N + ++ + E+A
Sbjct: 672 RPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKP-DIVTYNIFIKSYVANIMFEEAI 730
Query: 278 EFHMLLLQKNCAP 290
+ L+ + C P
Sbjct: 731 DLVRYLVTQGCRP 743
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 93/207 (44%), Gaps = 13/207 (6%)
Query: 40 SAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLY--MSVGQVEK 97
A + YTAL+ ++ A A +F+R+ + + YN + Y MSV E
Sbjct: 180 PAPDASAYTALVSAFSRAGRFRDAVAVFQRMVDGGVQPALVTYNVVFHAYSKMSVPWKEV 239
Query: 98 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 157
VALV + +K + D +TYN IS C + + DEM +G D V + +L+
Sbjct: 240 VALV-DSMKEDGIERDRYTYNTLISCCRRRGLHREAAQVFDEMKA-AGFEPDKVTFNSLL 297
Query: 158 NIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 217
++Y A A L E + +TY+ LI Y KD + + ++L + KQ
Sbjct: 298 DVYGKARKHEEA-IGVLKRMENAGCTPSVVTYNSLISAYV----KDGL--LEEALEL-KQ 349
Query: 218 KMTSRNYICILSSY-LMLGHLKEVGEI 243
+M R + +Y ++ L VG+I
Sbjct: 350 EMEFRGMKPDVVTYTTLISGLDRVGKI 376
>gi|356575482|ref|XP_003555869.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Glycine max]
Length = 576
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 109/251 (43%), Gaps = 9/251 (3%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 102
T+ETYT L++LY A + A +LF + + N Y ++ + G EK V
Sbjct: 259 TTETYTMLINLYGKAGKSFMALKLFHEMMSHDCKPNICTYTALVNAFAREGLCEKAEEVF 318
Query: 103 EEIKRKNVVPDIFTYNLWI---SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 159
E+++ + PD++ YN + S ++ + M C+ D Y LV+
Sbjct: 319 EQMQEAGLEPDVYAYNALMEAYSRAGYPYGAAEIFSLMQHMGCEP----DRASYNILVDA 374
Query: 160 YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 219
Y A +AE + + ++ ++ L+ Y+ +G+ +K ++I + + K+
Sbjct: 375 YGKAGFQDDAE-AVFKDMKRVGITPTMKSHMVLLSAYSKMGSVNKCEEILNQMCKSGLKL 433
Query: 220 TSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 279
+ +L+ Y LG ++ E++ + + + DIS N L+ + G E+ +
Sbjct: 434 DTYVLNSMLNLYGRLGQFGKMEEVL-RVMEKGSYVADISTYNILINRYGQAGFIERMEDL 492
Query: 280 HMLLLQKNCAP 290
LL K P
Sbjct: 493 FQLLPSKGLKP 503
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/272 (20%), Positives = 112/272 (41%), Gaps = 40/272 (14%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 102
T +TY L+ Y + EKAE +F ++ L +A++YN + M G +K +
Sbjct: 189 TEDTYALLIKAYCISGLLEKAEAVFAEMRNYGLPSSAVVYNAYINGLMKGGNSDKAEEIF 248
Query: 103 EEIKR-----------------------------------KNVVPDIFTYNLWISSCAAT 127
+ +K+ + P+I TY +++ A
Sbjct: 249 KRMKKDACKPTTETYTMLINLYGKAGKSFMALKLFHEMMSHDCKPNICTYTALVNAFARE 308
Query: 128 LNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVN-AESSTLVEAEKSITQRQW 186
++ ++ ++M ++G D Y L+ Y A + AE +L++ R
Sbjct: 309 GLCEKAEEVFEQMQ-EAGLEPDVYAYNALMEAYSRAGYPYGAAEIFSLMQHMGCEPDRA- 366
Query: 187 ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 246
+Y+ L+ Y G +D + ++K ++ T ++++ +LS+Y +G + + EI++Q
Sbjct: 367 -SYNILVDAYGKAGFQDDAEAVFKDMKRVGITPTMKSHMVLLSAYSKMGSVNKCEEILNQ 425
Query: 247 WKQSATSDFDISACNRLLGAFSDVGLTEKANE 278
+S D N +L + +G K E
Sbjct: 426 MCKSGLK-LDTYVLNSMLNLYGRLGQFGKMEE 456
Score = 44.7 bits (104), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 79/179 (44%), Gaps = 5/179 (2%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 102
T +++ LL Y+ K EE+ ++ +S L + + N M+ LY +GQ K+ V+
Sbjct: 399 TMKSHMVLLSAYSKMGSVNKCEEILNQMCKSGLKLDTYVLNSMLNLYGRLGQFGKMEEVL 458
Query: 103 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 162
+++ + V DI TYN+ I+ I++++ ++ G D V + + + Y
Sbjct: 459 RVMEKGSYVADISTYNILINRYGQAGFIERMEDLF-QLLPSKGLKPDVVTWTSRIGAYSK 517
Query: 163 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 221
+ L E+ I + +L A N+D+ +Q+ +R + M +
Sbjct: 518 KKLYLKC----LEIFEEMIDDGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMHKDMKT 572
Score = 40.4 bits (93), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 81/223 (36%), Gaps = 38/223 (17%)
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKK-FLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
R + PD+ YNL I + L + + +L + ++D Y L+ Y +
Sbjct: 148 RSSFKPDVICYNLLIEAFGQKLLYKEAESTYLQLLEARCIPTED--TYALLIKAYCISGL 205
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
L AE+ E + Y+ I GN DK ++I+K ++ K T+ Y
Sbjct: 206 LEKAEA-VFAEMRNYGLPSSAVVYNAYINGLMKGGNSDKAEEIFKRMKKDACKPTTETYT 264
Query: 226 CILSSY--------------LMLGH--------------------LKEVGEIIDQWKQSA 251
+++ Y M+ H L E E + + Q A
Sbjct: 265 MLINLYGKAGKSFMALKLFHEMMSHDCKPNICTYTALVNAFAREGLCEKAEEVFEQMQEA 324
Query: 252 TSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
+ D+ A N L+ A+S G A E L+ C P AS
Sbjct: 325 GLEPDVYAYNALMEAYSRAGYPYGAAEIFSLMQHMGCEPDRAS 367
>gi|297835316|ref|XP_002885540.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331380|gb|EFH61799.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 841
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 136/284 (47%), Gaps = 11/284 (3%)
Query: 19 DLMTKVFGI-HSGER---YFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQ 72
++M K +GI S E+ FE + T + TY L+ + A A +KA+ E++++
Sbjct: 508 NVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPDKAKCYLEKMRE 567
Query: 73 SNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQ 132
+ + + Y +++ ++ +GQ+ V +E+ N+ PD+ Y + I++ A T N+ Q
Sbjct: 568 TGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQ 627
Query: 133 VKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES--STLVEAEKSITQRQWITYD 190
+++ M ++G ++ V Y +L+ +Y +L AE+ L+ + T +
Sbjct: 628 AMSYVEAMK-EAGIPENSVIYNSLIKLYTKVGYLDEAEAIYRKLLRSCNETQYPDVYTSN 686
Query: 191 FLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQS 250
+I LY+ K + I++S++ +++ + +L Y G +E +I Q ++
Sbjct: 687 CMINLYSQRSMVRKAEAIFESMKQ-RREANEFTFAMMLCMYKKNGRFEEATQIAKQMREM 745
Query: 251 ATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
+S N +LG ++ G ++A E ++ P +++
Sbjct: 746 RILTDPLSY-NSVLGLYALDGRFKEAVETFKEMVSSGIQPDDST 788
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 90/203 (44%), Gaps = 8/203 (3%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 102
+S TY ++ Y + ++A E F+R+ + + + +N M+ +Y + GQ +V ++
Sbjct: 296 SSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHVYGNNGQFGEVTSLM 355
Query: 103 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 162
+ +K + PD TYN+ IS +I++ + EM +G D V Y L+ + +
Sbjct: 356 KTMKF-HCAPDTRTYNILISLHTKNNDIERAGTYFKEMK-GAGLKPDPVSYRTLLYAF-S 412
Query: 163 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM--TKQKMT 220
H+V + E + + + T L +Y + +++ W + M+
Sbjct: 413 IRHMVKEAEELIAEMDDNDVEIDEYTQSALTRMYI---EAEMLEKSWSWFKRFHVAGNMS 469
Query: 221 SRNYICILSSYLMLGHLKEVGEI 243
S Y + +Y G+L E +
Sbjct: 470 SEGYSANIDAYGERGYLSEAERV 492
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 56/119 (47%), Gaps = 8/119 (6%)
Query: 11 DSDYATRIDLMTKV-FGIHSGERYFEGLPLSAKTSETYTAL-LHLYAGAKWTEKAEELF- 67
+S Y T ID+ +K +H+ + + + E T + L +Y A+ +KAEE F
Sbjct: 221 NSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFK 280
Query: 68 -----ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 121
E S++ ++ YN M+ Y GQ+++ + + + + +VP T+N I
Sbjct: 281 KWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMI 339
>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
Length = 878
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 81/183 (44%), Gaps = 6/183 (3%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLH-LYAGAKWTEKAEELFERV 70
Y T ID++ K + YFE + T YT+L+H L KW +KAEEL +
Sbjct: 414 YGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKW-DKAEELILEM 472
Query: 71 KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 130
+ N + +N ++ + G+V + + + + R V PDI TYN I C +
Sbjct: 473 LDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKM 532
Query: 131 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 190
D+ K L M G D V Y L+N Y S + +A + E S ITY+
Sbjct: 533 DEATKLLASM-VSVGVKPDIVTYGTLINGYCRVSRMDDA-LALFKEMVSSGVSPNIITYN 590
Query: 191 FLI 193
++
Sbjct: 591 IIL 593
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 80/181 (44%), Gaps = 5/181 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY++++ A+ +KA E+ + ++ + + + YN ++ Y S GQ ++ ++++
Sbjct: 238 TYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKM 297
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ V P++ TY+ ++ + +K D M+ G D Y L+ Y T
Sbjct: 298 RSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMT-KRGLEPDIATYRTLLQGYATKGA 356
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
LV + + I Q ++ LI YA ++K+DQ +Q + N +
Sbjct: 357 LVEMHALLDLMVRNGI-QPDHHVFNILICAYA---KQEKVDQAMLVFSKMRQHGLNPNVV 412
Query: 226 C 226
C
Sbjct: 413 C 413
Score = 37.4 bits (85), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 87/205 (42%), Gaps = 9/205 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERV---KQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 102
+Y LL +++A EL + + + + YN ++ + G +K
Sbjct: 165 SYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTY 224
Query: 103 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 162
E+ + ++PD+ TY+ I++ +D+ + L+ M +G D + Y ++++ Y +
Sbjct: 225 HEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTM-VKNGVMPDCMTYNSILHGYCS 283
Query: 163 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS- 221
+ A TL + + +TY L+ G + +I+ S MTK+ +
Sbjct: 284 SGQPKEA-IGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDS--MTKRGLEPD 340
Query: 222 -RNYICILSSYLMLGHLKEVGEIID 245
Y +L Y G L E+ ++D
Sbjct: 341 IATYRTLLQGYATKGALVEMHALLD 365
>gi|223948189|gb|ACN28178.1| unknown [Zea mays]
gi|413935735|gb|AFW70286.1| hypothetical protein ZEAMMB73_980179 [Zea mays]
Length = 597
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 102/236 (43%), Gaps = 6/236 (2%)
Query: 36 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 95
G+P T+ Y A L A+ +EKA E+++R+K+ N Y M+ +Y Q
Sbjct: 237 GIP---PTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTETYTLMINVYGKANQP 293
Query: 96 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 155
V E+K P+I TY +++ A ++ ++ +EM +G D Y
Sbjct: 294 MSSLRVFREMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQ-QAGHEPDVYAYNA 352
Query: 156 LVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMT 215
L+ Y A L S E + +Y+ L+ + G + + ++ L+
Sbjct: 353 LMEAYSRAG-LPQGASEIFSLMEHMGCEPDRASYNILVDAFGRAGLHQEAEAAFQELKQQ 411
Query: 216 KQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 271
+ T ++++ +LS++ G++ E++ Q +S D A N +L A+ G
Sbjct: 412 GMRPTMKSHMLLLSAHARSGNVARCEEVMAQLHKSGLRP-DTFALNAMLNAYGRAG 466
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 91/205 (44%), Gaps = 39/205 (19%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSN-----LSFNALM------------------- 81
TYTAL++ +A EKAEE+FE ++Q+ ++NALM
Sbjct: 314 TYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLM 373
Query: 82 -----------YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 130
YN ++ + G ++ +E+K++ + P + ++ L +S+ A + N+
Sbjct: 374 EHMGCEPDRASYNILVDAFGRAGLHQEAEAAFQELKQQGMRPTMKSHMLLLSAHARSGNV 433
Query: 131 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES--STLVEAEKSIT-QRQWI 187
+ ++ + ++ SG D ++N Y A L + E + + + +I
Sbjct: 434 ARCEEVMAQLH-KSGLRPDTFALNAMLNAYGRAGRLDDMERLFAAMERGDGAIAGAPDTS 492
Query: 188 TYDFLIILYAGLGNKDKIDQIWKSL 212
TY+ ++ Y G D+++ ++SL
Sbjct: 493 TYNVMVNAYGRAGYLDRMEAAFRSL 517
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 47/246 (19%), Positives = 102/246 (41%), Gaps = 5/246 (2%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y L+ Y + +AE + + ++ Y ++ Y GQ+ + V+ E++
Sbjct: 175 YNLLIDAYGQKRQLSEAEAAYMALLEARCVPTEDTYALLLRAYCGSGQLHRAEGVISEMQ 234
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
R + P YN ++ ++ + M + ++ Y ++N+Y A+
Sbjct: 235 RNGIPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTET-YTLMINVYGKANQP 293
Query: 167 VNAESSTLVEAEKSITQRQWI-TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
++ S + KS+ + I TY L+ +A G +K +++++ ++ + Y
Sbjct: 294 MS--SLRVFREMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYN 351
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 285
++ +Y G + EI + + D ++ N L+ AF GL ++A L Q
Sbjct: 352 ALMEAYSRAGLPQGASEIFSLMEHMGC-EPDRASYNILVDAFGRAGLHQEAEAAFQELKQ 410
Query: 286 KNCAPT 291
+ PT
Sbjct: 411 QGMRPT 416
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 58/131 (44%), Gaps = 5/131 (3%)
Query: 15 ATRIDLMTKVFG-IHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQS 73
A R+D M ++F + G+ G P + TY +++ Y A + ++ E F +
Sbjct: 465 AGRLDDMERLFAAMERGDGAIAGAP----DTSTYNVMVNAYGRAGYLDRMEAAFRSLAAR 520
Query: 74 NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQV 133
L+ + + + + Y + + V EE+ PD T + +++C+ ++QV
Sbjct: 521 GLAADVVTWTSRIGAYARKKEYGQCLRVFEEMVDAGCYPDAGTAKVLLAACSDERQVEQV 580
Query: 134 KKFLDEMSCDS 144
K + M D+
Sbjct: 581 KAIVRSMHKDA 591
>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Vitis vinifera]
Length = 656
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 76/138 (55%), Gaps = 5/138 (3%)
Query: 23 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 82
K F +H+ E +G+ T TYT+L+++ + ++A++LFE++ +S + +M+
Sbjct: 442 KAFDLHN-EMLSKGI---EPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMF 497
Query: 83 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 142
N M+ + + G VE+ ++++E+ RK+V PD T+N + +++ + LDEM
Sbjct: 498 NAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMK- 556
Query: 143 DSGGSDDWVKYVNLVNIY 160
G D + Y L++ Y
Sbjct: 557 RRGIKPDHISYNTLISGY 574
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 57/117 (48%), Gaps = 1/117 (0%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
S TY +L+ E+A LF+++ + L NA+ YN ++ Y + G +E+ +
Sbjct: 319 SYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRD 378
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
E+ +K ++P + TYNL + + + + + EM G D + Y L+N Y
Sbjct: 379 EMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMR-KKGIIPDAITYNILINGY 434
Score = 44.7 bits (104), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 49/254 (19%), Positives = 99/254 (38%), Gaps = 38/254 (14%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
+ T T+ ++++ +KA E ++ N + YN ++ Y S G +E
Sbjct: 246 SSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARR 305
Query: 101 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
+++ ++ K + PD +TY IS +++ D+M + G + V Y L++ Y
Sbjct: 306 ILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKM-VEIGLVPNAVTYNTLIDGY 364
Query: 161 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 220
L E++ + R D++ K M +
Sbjct: 365 CNKGDL-----------ERAFSYR---------------------DEMVKKGIMP----S 388
Query: 221 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 280
Y ++ + M G + E ++I + ++ D N L+ +S G +KA + H
Sbjct: 389 VSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIP-DAITYNILINGYSRCGNAKKAFDLH 447
Query: 281 MLLLQKNCAPTNAS 294
+L K PT+ +
Sbjct: 448 NEMLSKGIEPTHVT 461
>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 76/138 (55%), Gaps = 5/138 (3%)
Query: 23 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 82
K F +H+ E +G+ T TYT+L+++ + ++A++LFE++ +S + +M+
Sbjct: 420 KAFDLHN-EMLSKGI---EPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMF 475
Query: 83 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 142
N M+ + + G VE+ ++++E+ RK+V PD T+N + +++ + LDEM
Sbjct: 476 NAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMK- 534
Query: 143 DSGGSDDWVKYVNLVNIY 160
G D + Y L++ Y
Sbjct: 535 RRGIKPDHISYNTLISGY 552
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 57/117 (48%), Gaps = 1/117 (0%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
S TY +L+ E+A LF+++ + L NA+ YN ++ Y + G +E+ +
Sbjct: 297 SYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRD 356
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
E+ +K ++P + TYNL + + + + + EM G D + Y L+N Y
Sbjct: 357 EMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMR-KKGIIPDAITYNILINGY 412
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 49/254 (19%), Positives = 99/254 (38%), Gaps = 38/254 (14%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
+ T T+ ++++ +KA E ++ N + YN ++ Y S G +E
Sbjct: 224 SSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARR 283
Query: 101 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
+++ ++ K + PD +TY IS +++ D+M + G + V Y L++ Y
Sbjct: 284 ILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKM-VEIGLVPNAVTYNTLIDGY 342
Query: 161 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 220
L E++ + R D++ K M +
Sbjct: 343 CNKGDL-----------ERAFSYR---------------------DEMVKKGIMP----S 366
Query: 221 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 280
Y ++ + M G + E ++I + ++ D N L+ +S G +KA + H
Sbjct: 367 VSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIP-DAITYNILINGYSRCGNAKKAFDLH 425
Query: 281 MLLLQKNCAPTNAS 294
+L K PT+ +
Sbjct: 426 NEMLSKGIEPTHVT 439
>gi|226507918|ref|NP_001144813.1| uncharacterized protein LOC100277891 [Zea mays]
gi|195647376|gb|ACG43156.1| hypothetical protein [Zea mays]
Length = 597
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 102/236 (43%), Gaps = 6/236 (2%)
Query: 36 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 95
G+P T+ Y A L A+ +EKA E+++R+K+ N Y M+ +Y Q
Sbjct: 237 GIP---PTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTZTYXLMINVYGKANQP 293
Query: 96 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 155
V E+K P+I TY +++ A ++ ++ +EM +G D Y
Sbjct: 294 MSSLRVFREMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQ-QAGHEPDVYAYNA 352
Query: 156 LVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMT 215
L+ Y A L S E + +Y+ L+ + G + + ++ L+
Sbjct: 353 LMEAYSRAG-LPQGASEIFSLMEHMGCEPDRASYNILVDAFGRAGLHQEAEAAFQELKQQ 411
Query: 216 KQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 271
+ T ++++ +LS++ G++ E++ Q +S D A N +L A+ G
Sbjct: 412 GMRPTMKSHMLLLSAHARSGNVARCEEVMAQLHKSGLRP-DTFALNAMLNAYGRAG 466
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 46/248 (18%), Positives = 95/248 (38%), Gaps = 38/248 (15%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y L+ Y + +AE + + ++ Y ++ Y GQ+ + V+ E++
Sbjct: 175 YNLLIDAYGQKRQLSEAEAAYMALLEARCVPTEDTYALLLRAYCGSGQLHRAEGVISEMQ 234
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
R + P YN ++ L + C V +Y
Sbjct: 235 RNGIPPTATVYNAYLDG-------------LLKARCSE----------KAVEVY------ 265
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 226
++ E+ T Z TY +I +Y ++++ ++ K Y
Sbjct: 266 ------QRMKKERCRTNTZ--TYXLMINVYGKANQPMSSLRVFREMKSVGCKPNICTYTA 317
Query: 227 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 286
+++++ G ++ E+ ++ +Q A + D+ A N L+ A+S GL + A+E L+
Sbjct: 318 LVNAFAREGLCEKAEEVFEEMQQ-AGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHM 376
Query: 287 NCAPTNAS 294
C P AS
Sbjct: 377 GCEPDRAS 384
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 58/130 (44%), Gaps = 3/130 (2%)
Query: 15 ATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSN 74
A R+D M ++F + ER +G A + TY L++ Y A + ++ E F +
Sbjct: 465 AGRLDDMERLFA--AMER-GDGASAGAPDTSTYNVLVNAYGRAGYLDRMEAAFRSLAARG 521
Query: 75 LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVK 134
L+ + + + + Y + + V EE+ PD T + +++C+ ++QV
Sbjct: 522 LAADVVTWTSRIGAYARKKEYGQCLRVFEEMVDAGCYPDAGTAKVLLAACSDERQVEQVT 581
Query: 135 KFLDEMSCDS 144
+ M D+
Sbjct: 582 AIVRSMHKDA 591
>gi|255540825|ref|XP_002511477.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550592|gb|EEF52079.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 754
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 123/280 (43%), Gaps = 6/280 (2%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVK 71
Y I L+ + + FE +P ++ +YTAL++ Y E + EL ER+K
Sbjct: 145 YTIIISLLGREGLLEKSTEIFEEMPTHGVPRSVFSYTALINSYGRHGQYEVSLELLERMK 204
Query: 72 QSNLSFNALMYNEMMTLYMSVG-QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 130
+ ++ + L YN ++ G E + + E++ + + PDI TYN +++CA
Sbjct: 205 KEKVTPSILTYNTVINSCARGGLNWEGLLSLFAEMRHEGIQPDIITYNTLLNACANRGLG 264
Query: 131 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 190
D+ + M+ + G D Y NLV + + L S L E E S +Y+
Sbjct: 265 DEAEMVFRTMN-EGGMVPDITTYRNLVETFGKLNKLEKV-SELLKEMESSGNLPDISSYN 322
Query: 191 FLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQS 250
L+ YA G+ +++ ++ + + Y +L+ Y G +V E+ + K S
Sbjct: 323 VLLEAYASKGDIRHAMGVFRQMQEARCVPNAVTYSMLLNLYGGHGRYDDVRELFLEMKVS 382
Query: 251 ATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
T D+ N L+ F + G ++ ++++N P
Sbjct: 383 NTEP-DVGTYNVLIEVFGEGGYFKEVVTLFHDMVEENVEP 421
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY+ LL+LY G + ELF +K SN + YN ++ ++ G ++V + ++
Sbjct: 355 TYSMLLNLYGGHGRYDDVRELFLEMKVSNTEPDVGTYNVLIEVFGEGGYFKEVVTLFHDM 414
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
+NV P++ TY I +C + KK L M
Sbjct: 415 VEENVEPNMGTYEGLIYACGKGGLHEDAKKILLHM 449
Score = 40.4 bits (93), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 93/218 (42%), Gaps = 12/218 (5%)
Query: 78 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFL 137
N +Y +++L G +EK + EE+ V +F+Y I+S + + L
Sbjct: 141 NEHIYTIIISLLGREGLLEKSTEIFEEMPTHGVPRSVFSYTALINSYGRHGQYEVSLELL 200
Query: 138 DEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES--STLVEAEKSITQRQWITYDFLIIL 195
+ M + + + Y ++N A +N E S E Q ITY+ L+
Sbjct: 201 ERMKKEK-VTPSILTYNTVIN--SCARGGLNWEGLLSLFAEMRHEGIQPDIITYNTLLNA 257
Query: 196 YAGLGNKDKIDQIWKSLR---MTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSAT 252
A G D+ + +++++ M T RN ++ ++ L L++V E++ + + S
Sbjct: 258 CANRGLGDEAEMVFRTMNEGGMVPDITTYRN---LVETFGKLNKLEKVSELLKEMESSGN 314
Query: 253 SDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
DIS+ N LL A++ G A + + C P
Sbjct: 315 LP-DISSYNVLLEAYASKGDIRHAMGVFRQMQEARCVP 351
>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
Length = 580
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 67/119 (56%), Gaps = 1/119 (0%)
Query: 42 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 101
T TYT+L+++ + ++A++LFE++ +S + +M+N M+ + + G VE+ ++
Sbjct: 381 PTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFML 440
Query: 102 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
++E+ RK+V PD T+N + +++ + LDEM G D + Y L++ Y
Sbjct: 441 LKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMK-XRGIKPDHISYNTLISGY 498
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 57/117 (48%), Gaps = 1/117 (0%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
S TY +L+ E+A LF+++ + L NA+ YN ++ Y + G +E+ +
Sbjct: 243 SYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRD 302
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
E+ +K ++P + TYNL + + + + + EM G D + Y L+N Y
Sbjct: 303 EMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMR-KKGIIPDAITYNILINGY 358
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 46/234 (19%), Positives = 91/234 (38%), Gaps = 38/234 (16%)
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
+KA E ++ N + YN ++ Y S G +E +++ ++ K + PD +TY
Sbjct: 190 KKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSL 249
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
IS +++ D+M + G + V Y L++ Y L E++
Sbjct: 250 ISGMCKEGRLEEASGLFDKM-VEIGLVPNAVTYNTLIDGYCNKGDL-----------ERA 297
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 240
+ R D++ K M + Y ++ + M G + E
Sbjct: 298 FSYR---------------------DEMVKKGIMP----SVSTYNLLVHALFMEGRMGEA 332
Query: 241 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
++I + ++ D N L+ +S G ++A + H +L K PT+ +
Sbjct: 333 DDMIKEMRKKGIIP-DAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVT 385
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 45/244 (18%), Positives = 96/244 (39%), Gaps = 4/244 (1%)
Query: 33 YFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSV 92
+ EGL +Y ++H Y+ E A + + ++ + ++ Y +++
Sbjct: 198 FMEGLGFKPNVV-SYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKE 256
Query: 93 GQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVK 152
G++E+ + + +++ +VP+ TYN I ++++ + DEM G
Sbjct: 257 GRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEM-VKKGIMPSVST 315
Query: 153 YVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 212
Y LV+ + A+ + E K ITY+ LI Y+ GN + + +
Sbjct: 316 YNLLVHALFMEGRMGEAD-DMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEM 374
Query: 213 RMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGL 272
+ T Y ++ +KE ++ ++ S D+ N ++ G
Sbjct: 375 LSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSP-DVIMFNAMIDGHCANGN 433
Query: 273 TEKA 276
E+A
Sbjct: 434 VERA 437
>gi|15240478|ref|NP_198079.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635757|sp|O04647.2|PP399_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g27270; AltName: Full=Protein EMBRYO DEFECTIVE 976
gi|332006282|gb|AED93665.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1038
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 82/183 (44%), Gaps = 17/183 (9%)
Query: 5 KEFVLSDSDYATRIDLMTKVFGIHSGERYFE-----GLPLSAKTSETYTALLHLYAGAKW 59
K L Y T I M + + +E G+P S +TY ++ +Y
Sbjct: 768 KNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSI---QTYNTMISVYGRGLQ 824
Query: 60 TEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNL 119
+KA E+F ++S L + +Y M+ Y G++ + + E+++K + P +YN+
Sbjct: 825 LDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNM 884
Query: 120 WISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK 179
+ CA + +V + L M +G D Y+ L+ +Y AESS EAEK
Sbjct: 885 MVKICATSRLHHEVDELLQAME-RNGRCTDLSTYLTLIQVY--------AESSQFAEAEK 935
Query: 180 SIT 182
+IT
Sbjct: 936 TIT 938
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 106/245 (43%), Gaps = 7/245 (2%)
Query: 35 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 94
EG+P TYT ++ YA + E+A + F +K + Y+ +++L + G
Sbjct: 287 EGVP---PNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGD 343
Query: 95 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 154
EK + E+++ + +VP +T +S T N + +M + +D+ ++ +
Sbjct: 344 WEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGL 403
Query: 155 NLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM 214
++ IY +A+S E E+ TY + ++ GN K + + ++
Sbjct: 404 -IIRIYGKLGLFHDAQS-MFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKT 461
Query: 215 TKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTE 274
++ YI +L Y + ++ E S T D S+CN +L ++ + L E
Sbjct: 462 RDIPLSRFAYIVMLQCYAKIQNVDCAEEAFRAL--SKTGLPDASSCNDMLNLYTRLNLGE 519
Query: 275 KANEF 279
KA F
Sbjct: 520 KAKGF 524
>gi|449437712|ref|XP_004136635.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 130/302 (43%), Gaps = 37/302 (12%)
Query: 11 DSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERV 70
+ DYA+R+DL+ K+ G+ E Y +P S + Y LL A KAE++F ++
Sbjct: 204 EKDYASRLDLIGKLRGLRMAENYIAKIPKSFQGEVVYQTLLVNCVIASNVHKAEKVFNKM 263
Query: 71 KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 130
K A N+++ LY + K+A V+ +K++NV TY + I + +I
Sbjct: 264 KNLEFPITAFACNQLLLLYKRTDK-RKIADVLLLMKKENVKYSTSTYRILIDVNGLSNDI 322
Query: 131 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 190
+++ +D M + G D LV Y++ L + + L E E+ ++
Sbjct: 323 TGMEEVVDSMKAE-GIKLDVETLSRLVKHYVSGG-LKDKAKAILKEMEEINSEGSRWPCR 380
Query: 191 FLIILYAGLGNKDKIDQIWK--------------------------------SLRMTKQK 218
L+ LY L +D++ ++W+ + T +K
Sbjct: 381 ILLPLYGELQMEDEVRRLWEICGSNPHIEECMAAIVAWGKLKNIQEAEKIFDRVVKTGEK 440
Query: 219 MTSRNYICILSSYLMLGHLKEVG-EIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 277
+++R+Y +L+ Y + G E++ Q +S S D + ++ + + G EKA+
Sbjct: 441 LSARHYSTMLNVYREDSKMLTKGKEVVKQMAESG-SRMDPVTLDAVVKLYVEAGEVEKAD 499
Query: 278 EF 279
F
Sbjct: 500 SF 501
>gi|297737325|emb|CBI26526.3| unnamed protein product [Vitis vinifera]
Length = 1005
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 109/248 (43%), Gaps = 11/248 (4%)
Query: 48 TALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKR 107
+ ++H A ++AE + R + L + + YN + + G++ + + +
Sbjct: 682 SKVVHALANYGKHQEAENVIRRSFEDGLELDTVAYNTFINAMLGAGRLHFANSIYDRMVS 741
Query: 108 KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS-GGSDDWVKYVNLVNIYITASHL 166
V P I TYN IS +D+ + ++ C G S D Y NL++ Y A
Sbjct: 742 LGVAPSIQTYNTMISVYGRGRKLDKAVEMFNKARCSGVGVSLDEKTYTNLISYYGKAGK- 800
Query: 167 VNAESSTLV-EAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ E+S L E ++ + ++Y+ +I +YA G + ++++++ S Y+
Sbjct: 801 -SHEASLLFREMQEEGIKPGKVSYNIMINVYATAGLHHEAQELFQAMLRDGCSPDSLTYL 859
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC---NRLLGAFSDVGLTEKANEFHML 282
++ +Y E E I S ++ + +C N+LL AF+ G TE+A +
Sbjct: 860 ALIRAYTQSFKFLEAEETI----MSMQNEGVLPSCVHFNQLLSAFAKAGFTEEAERVYHT 915
Query: 283 LLQKNCAP 290
LL +P
Sbjct: 916 LLSAGLSP 923
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/216 (19%), Positives = 99/216 (45%), Gaps = 4/216 (1%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQS--NLSFNALMYNEMMTLYMSVGQVEKV 98
A + +TY ++ +Y + +KA E+F + + S +S + Y +++ Y G+ +
Sbjct: 745 APSIQTYNTMISVYGRGRKLDKAVEMFNKARCSGVGVSLDEKTYTNLISYYGKAGKSHEA 804
Query: 99 ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 158
+L+ E++ + + P +YN+ I+ A + ++ M D G S D + Y+ L+
Sbjct: 805 SLLFREMQEEGIKPGKVSYNIMINVYATAGLHHEAQELFQAMLRD-GCSPDSLTYLALIR 863
Query: 159 IYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQK 218
Y + + AE T++ + + ++ L+ +A G ++ ++++ +L
Sbjct: 864 AYTQSFKFLEAE-ETIMSMQNEGVLPSCVHFNQLLSAFAKAGFTEEAERVYHTLLSAGLS 922
Query: 219 MTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSD 254
Y +L YL G +++ +Q ++S D
Sbjct: 923 PDVACYRTMLRGYLDYGCVEKGITFFEQIRESVEPD 958
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 106/248 (42%), Gaps = 13/248 (5%)
Query: 48 TALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKR 107
+L+ LY +KA E+F ++ + L+Y M+ Y G+ E+ + EE+
Sbjct: 614 ASLITLYGKQHKLKKAIEVFSAIE--GCTSGKLIYISMIDAYAKCGKAEEAYHLYEEVTG 671
Query: 108 KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS--H 165
K + + + + + + A + + + S + G D V Y +N + A H
Sbjct: 672 KGIELGVVSISKVVHALANYGKHQEAENVIRR-SFEDGLELDTVAYNTFINAMLGAGRLH 730
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNK-DKIDQIWKSLRMTKQKMT--SR 222
N+ +V + + + TY+ +I +Y G G K DK +++ R + ++ +
Sbjct: 731 FANSIYDRMVSLGVAPSIQ---TYNTMISVY-GRGRKLDKAVEMFNKARCSGVGVSLDEK 786
Query: 223 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 282
Y ++S Y G E + + ++ +S N ++ ++ GL +A E
Sbjct: 787 TYTNLISYYGKAGKSHEASLLFREMQEEGIKPGKVSY-NIMINVYATAGLHHEAQELFQA 845
Query: 283 LLQKNCAP 290
+L+ C+P
Sbjct: 846 MLRDGCSP 853
Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
+ LL +A A +TE+AE ++ + + LS + Y M+ Y+ G VEK E+I
Sbjct: 893 FNQLLSAFAKAGFTEEAERVYHTLLSAGLSPDVACYRTMLRGYLDYGCVEKGITFFEQI- 951
Query: 107 RKNVVPDIF 115
R++V PD F
Sbjct: 952 RESVEPDRF 960
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 35/180 (19%), Positives = 73/180 (40%), Gaps = 25/180 (13%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
YT LL +Y + AE+ F + ++ + + M+ Y G+ + + ++
Sbjct: 195 YTILLRVYGQVGKIKLAEQAFLEMLEAGCEPDEVACGTMLCTYARWGRHKAMLSFYSAVQ 254
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
+ ++P I +N +SS KK L + +++ + L
Sbjct: 255 ERGIIPSIAVFNFMLSSLQ--------KKSL---------------HGKVIDFSLVKDGL 291
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 226
V T E + + +TY LI L + GN+D+ ++++ +R +++ NY C
Sbjct: 292 VEESFKTFYEMKNLGFVPEEVTYSLLISLSSKTGNRDEAIKLYEDMRY--RRIVPSNYTC 349
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 83/222 (37%), Gaps = 39/222 (17%)
Query: 93 GQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVK 152
G VE+ E+K VP+ TY+L IS + T N D+ K ++M ++
Sbjct: 290 GLVEESFKTFYEMKNLGFVPEEVTYSLLISLSSKTGNRDEAIKLYEDMRYRRIVPSNYT- 348
Query: 153 YVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 212
+L+ +Y A S E EK+ + Y LI +Y LG + ++ +K
Sbjct: 349 CASLLTLYYKNGDYSRA-VSLFSEMEKNKIVADEVIYGLLIRIYGKLGLYEDAEKTFKET 407
Query: 213 R----MTKQK------------------------MTSRN-------YICILSSYLMLGHL 237
+T +K M SRN YI +L Y+M L
Sbjct: 408 EQLGLLTNEKTYIAMAQVHLNSGNFEKALTIMELMRSRNIWFSRFSYIVLLQCYVMKEDL 467
Query: 238 KEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 279
S T D +CN +L + + L EKA +F
Sbjct: 468 ASAEATFQAL--SKTGLPDAGSCNDMLNLYIKLDLLEKAKDF 507
>gi|225454795|ref|XP_002274101.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27270-like [Vitis vinifera]
Length = 1071
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 109/248 (43%), Gaps = 11/248 (4%)
Query: 48 TALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKR 107
+ ++H A ++AE + R + L + + YN + + G++ + + +
Sbjct: 748 SKVVHALANYGKHQEAENVIRRSFEDGLELDTVAYNTFINAMLGAGRLHFANSIYDRMVS 807
Query: 108 KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS-GGSDDWVKYVNLVNIYITASHL 166
V P I TYN IS +D+ + ++ C G S D Y NL++ Y A
Sbjct: 808 LGVAPSIQTYNTMISVYGRGRKLDKAVEMFNKARCSGVGVSLDEKTYTNLISYYGKAGK- 866
Query: 167 VNAESSTLV-EAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ E+S L E ++ + ++Y+ +I +YA G + ++++++ S Y+
Sbjct: 867 -SHEASLLFREMQEEGIKPGKVSYNIMINVYATAGLHHEAQELFQAMLRDGCSPDSLTYL 925
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC---NRLLGAFSDVGLTEKANEFHML 282
++ +Y E E I S ++ + +C N+LL AF+ G TE+A +
Sbjct: 926 ALIRAYTQSFKFLEAEETI----MSMQNEGVLPSCVHFNQLLSAFAKAGFTEEAERVYHT 981
Query: 283 LLQKNCAP 290
LL +P
Sbjct: 982 LLSAGLSP 989
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/216 (19%), Positives = 99/216 (45%), Gaps = 4/216 (1%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQS--NLSFNALMYNEMMTLYMSVGQVEKV 98
A + +TY ++ +Y + +KA E+F + + S +S + Y +++ Y G+ +
Sbjct: 811 APSIQTYNTMISVYGRGRKLDKAVEMFNKARCSGVGVSLDEKTYTNLISYYGKAGKSHEA 870
Query: 99 ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 158
+L+ E++ + + P +YN+ I+ A + ++ M D G S D + Y+ L+
Sbjct: 871 SLLFREMQEEGIKPGKVSYNIMINVYATAGLHHEAQELFQAMLRD-GCSPDSLTYLALIR 929
Query: 159 IYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQK 218
Y + + AE T++ + + ++ L+ +A G ++ ++++ +L
Sbjct: 930 AYTQSFKFLEAE-ETIMSMQNEGVLPSCVHFNQLLSAFAKAGFTEEAERVYHTLLSAGLS 988
Query: 219 MTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSD 254
Y +L YL G +++ +Q ++S D
Sbjct: 989 PDVACYRTMLRGYLDYGCVEKGITFFEQIRESVEPD 1024
Score = 43.9 bits (102), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 77/180 (42%), Gaps = 4/180 (2%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
YT LL +Y + AE+ F + ++ + + M+ Y G+ + + ++
Sbjct: 195 YTILLRVYGQVGKIKLAEQAFLEMLEAGCEPDEVACGTMLCTYARWGRHKAMLSFYSAVQ 254
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
+ ++P I +N +SS +V EM D G + Y +++ + L
Sbjct: 255 ERGIIPSIAVFNFMLSSLQKKSLHGKVIDLWREM-VDKGVVPNSFTYTVVIS-SLVKDGL 312
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 226
V T E + + +TY LI L + GN+D+ ++++ +R +++ NY C
Sbjct: 313 VEESFKTFYEMKNLGFVPEEVTYSLLISLSSKTGNRDEAIKLYEDMRY--RRIVPSNYTC 370
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 106/248 (42%), Gaps = 13/248 (5%)
Query: 48 TALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKR 107
+L+ LY +KA E+F ++ + L+Y M+ Y G+ E+ + EE+
Sbjct: 680 ASLITLYGKQHKLKKAIEVFSAIE--GCTSGKLIYISMIDAYAKCGKAEEAYHLYEEVTG 737
Query: 108 KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS--H 165
K + + + + + + A + + + S + G D V Y +N + A H
Sbjct: 738 KGIELGVVSISKVVHALANYGKHQEAENVIRR-SFEDGLELDTVAYNTFINAMLGAGRLH 796
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNK-DKIDQIWKSLRMTKQKMT--SR 222
N+ +V + + + TY+ +I +Y G G K DK +++ R + ++ +
Sbjct: 797 FANSIYDRMVSLGVAPSIQ---TYNTMISVY-GRGRKLDKAVEMFNKARCSGVGVSLDEK 852
Query: 223 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 282
Y ++S Y G E + + ++ +S N ++ ++ GL +A E
Sbjct: 853 TYTNLISYYGKAGKSHEASLLFREMQEEGIKPGKVSY-NIMINVYATAGLHHEAQELFQA 911
Query: 283 LLQKNCAP 290
+L+ C+P
Sbjct: 912 MLRDGCSP 919
Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
+ LL +A A +TE+AE ++ + + LS + Y M+ Y+ G VEK E+I
Sbjct: 959 FNQLLSAFAKAGFTEEAERVYHTLLSAGLSPDVACYRTMLRGYLDYGCVEKGITFFEQI- 1017
Query: 107 RKNVVPDIF 115
R++V PD F
Sbjct: 1018 RESVEPDRF 1026
Score = 40.4 bits (93), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 90/237 (37%), Gaps = 39/237 (16%)
Query: 78 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFL 137
N+ Y +++ + G VE+ E+K VP+ TY+L IS + T N D+ K
Sbjct: 296 NSFTYTVVISSLVKDGLVEESFKTFYEMKNLGFVPEEVTYSLLISLSSKTGNRDEAIKLY 355
Query: 138 DEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYA 197
++M ++ +L+ +Y A S E EK+ + Y LI +Y
Sbjct: 356 EDMRYRRIVPSNYT-CASLLTLYYKNGDYSRA-VSLFSEMEKNKIVADEVIYGLLIRIYG 413
Query: 198 GLGNKDKIDQIWKSLR----MTKQK------------------------MTSRN------ 223
LG + ++ +K +T +K M SRN
Sbjct: 414 KLGLYEDAEKTFKETEQLGLLTNEKTYIAMAQVHLNSGNFEKALTIMELMRSRNIWFSRF 473
Query: 224 -YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 279
YI +L Y+M L S T D +CN +L + + L EKA +F
Sbjct: 474 SYIVLLQCYVMKEDLASAEATFQAL--SKTGLPDAGSCNDMLNLYIKLDLLEKAKDF 528
>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
Length = 816
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 102/235 (43%), Gaps = 5/235 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY++++H A+ +KAE ++ + + YN ++ Y S GQ ++ V +E+
Sbjct: 258 TYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEM 317
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+R++++PD+ N + S I + + D M+ G + D Y ++N Y T
Sbjct: 318 RRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAM-KGQNPDVFSYTIMLNGYATKGC 376
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
LV+ + I + T++ LI YA G DK I+ +R K Y+
Sbjct: 377 LVDMTDLFDLMLGDGIAPDIY-TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYM 435
Query: 226 CILSSYLMLGHLKEVGEIIDQW-KQSATSDFDISACNRLLGAFSDVGLTEKANEF 279
++++ +G + + E +Q Q D C L+ F G KA E
Sbjct: 436 TVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHC--LIQGFCTHGSLLKAKEL 488
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 105/238 (44%), Gaps = 15/238 (6%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSN--LSFNALMYNEMMTLYMSVGQVEKVALVVE 103
+Y LL + +A++L + + S + + YN ++ + G V K + +
Sbjct: 186 SYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFK 245
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
E+ ++ + PD+ TY+ + + +D+ + FL +M D+W Y NL+ Y +
Sbjct: 246 EMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWT-YNNLIYGYSST 304
Query: 164 SHLVNAESSTLVEAEKSITQRQWITYDFLII--LYAGLGNKDKIDQ---IWKSLRMTKQK 218
A V K + +RQ I D + + L L KI + ++ ++ M Q
Sbjct: 305 GQWKEA-----VRVFKEM-RRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQN 358
Query: 219 MTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
+Y +L+ Y G L ++ ++ D + DI N L+ A+++ G+ +KA
Sbjct: 359 PDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAP-DIYTFNVLIKAYANCGMLDKA 415
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 50/250 (20%), Positives = 101/250 (40%), Gaps = 12/250 (4%)
Query: 35 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 94
+G + + TS TY L+ A E A F ++ ++ L +A++ + ++ + +
Sbjct: 104 QGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKR 163
Query: 95 V-EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGG---SDDW 150
E + +++ VPD+F+YN+ + S Q L M+ GG S D
Sbjct: 164 TDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMA--EGGTVCSPDV 221
Query: 151 VKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK 210
V Y +++ + VN E + +TY ++ DK + +
Sbjct: 222 VAYNTVIDGFFKEGD-VNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLR 280
Query: 211 SLRMTKQKMTSRN--YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFS 268
+M + + N Y ++ Y G KE + + ++ + D+ A N L+G+
Sbjct: 281 --QMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILP-DVVALNTLMGSLC 337
Query: 269 DVGLTEKANE 278
G ++A +
Sbjct: 338 KYGKIKEARD 347
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 31/194 (15%), Positives = 86/194 (44%), Gaps = 2/194 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+ L+ YA +KA +F ++ + + + Y ++ +G+++ ++
Sbjct: 398 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQM 457
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ VVPD + Y+ I ++ + K+ + E+ ++G D V + +++N
Sbjct: 458 IDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIM-NNGMRLDIVFFGSIINNLCKLGR 516
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+++A++ + + + Y+ L+ Y +G +K +++ ++ + Y
Sbjct: 517 VMDAQNIFDLTVNVGL-HPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYG 575
Query: 226 CILSSYLMLGHLKE 239
+++ Y +G + E
Sbjct: 576 TLVNGYCKIGRIDE 589
>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
Length = 716
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 101/234 (43%), Gaps = 3/234 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY++++H A+ KAE ++ + + YN ++ Y S GQ ++ V +E+
Sbjct: 260 TYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEM 319
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+R +++PD+ T N+ + S I + + D M+ G + D Y ++N Y T
Sbjct: 320 RRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAM-KGQNPDVFSYKIMLNGYATKGC 378
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
LV+ + I + T+ LI YA G DK I+ +R K Y
Sbjct: 379 LVDMTDLFDLMLGDGIAPDIY-TFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYT 437
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 279
++++ +G + + E +Q + D A + L+ F G KA E
Sbjct: 438 TVIAALCRIGKMDDAMEKFNQMIDQGVAP-DKYAYHCLIQGFCTHGSLLKAKEL 490
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 44/233 (18%), Positives = 98/233 (42%), Gaps = 5/233 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSN--LSFNALMYNEMMTLYMSVGQVEKVALVVE 103
+Y+ LL + +A++L + + S + + Y ++ + G V K + +
Sbjct: 188 SYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFK 247
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
E+ ++ + PD+ TY+ + + + + + FL +M D+W Y NL+ Y +
Sbjct: 248 EMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWT-YNNLIYGYSST 306
Query: 164 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 223
A E + +T + L+ G + ++ ++ M Q +
Sbjct: 307 GQWKEA-VRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFS 365
Query: 224 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
Y +L+ Y G L ++ ++ D + DI + L+ A+++ G+ +KA
Sbjct: 366 YKIMLNGYATKGCLVDMTDLFDLMLGDGIAP-DIYTFSVLIKAYANCGMLDKA 417
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 54/293 (18%), Positives = 105/293 (35%), Gaps = 39/293 (13%)
Query: 35 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 94
+G + + TS TY L+ A E A F ++ ++ L + ++ N ++ + +
Sbjct: 106 QGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKR 165
Query: 95 V-EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM------------- 140
E + +++ VPD+F+Y++ + S Q L M
Sbjct: 166 TDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVA 225
Query: 141 ----------------SCD-------SGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA 177
+CD G D V Y ++V+ A + AE+
Sbjct: 226 YTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMV 285
Query: 178 EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHL 237
K + W TY+ LI Y+ G + +++K +R ++ S G +
Sbjct: 286 NKGVLPDNW-TYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKI 344
Query: 238 KEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
KE ++ D + D+ + +L ++ G + L+L AP
Sbjct: 345 KEARDVFDTMAMKGQNP-DVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAP 396
>gi|225437600|ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic [Vitis vinifera]
Length = 867
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 104/234 (44%), Gaps = 3/234 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+ +LL + E A LF + + + YN ++ GQ++ ++ E+
Sbjct: 293 TFNSLLAVCGRGGLWEAARNLFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEM 352
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
RK+++P++ TY+ I A +D+ +EM S G D V Y L++IY
Sbjct: 353 PRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKFASIGLDR-VSYNTLLSIYAKLGR 411
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
A + E E S ++ +TY+ L+ Y G +++ ++++ ++ + Y
Sbjct: 412 FEEA-LNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYS 470
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 279
++ Y G +E E+ ++K++ D+ + L+ A GL E A F
Sbjct: 471 TLIDVYSKGGLYQEAMEVFREFKKAGLKA-DVVLYSALIDALCKNGLVESAVSF 523
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 104/260 (40%), Gaps = 11/260 (4%)
Query: 17 RIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLS 76
+++L VF E Y T ++AL+ Y + + ++A ++FE +K S L
Sbjct: 200 QVELAKNVFETALNEGY-------GNTVYAFSALISAYGRSGYCDEAIKVFETMKSSGLK 252
Query: 77 FNALMYNEMMTLYMSVG-QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKK 135
N + YN ++ G + A + +E+ R V PD T+N ++ C + +
Sbjct: 253 PNLVTYNAVIDACGKGGVDFNRAAEIFDEMLRNGVQPDRITFNSLLAVCGRGGLWEAARN 312
Query: 136 FLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIIL 195
EM G D Y L++ + + + E + +TY +I
Sbjct: 313 LFSEM-LYRGIEQDIFTYNTLLDAVCKGGQM-DLAFQIMSEMPRKHIMPNVVTYSTVIDG 370
Query: 196 YAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDF 255
YA G D+ ++ ++ + +Y +LS Y LG +E + + + S
Sbjct: 371 YAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKK- 429
Query: 256 DISACNRLLGAFSDVGLTEK 275
D N LLG + G E+
Sbjct: 430 DAVTYNALLGGYGKQGKYEE 449
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 56/119 (47%), Gaps = 1/119 (0%)
Query: 42 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 101
K + TY ALL Y E+ + +FE +K + N L Y+ ++ +Y G ++ V
Sbjct: 429 KDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEV 488
Query: 102 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
E K+ + D+ Y+ I + ++ FLDEM+ G + V Y ++++ +
Sbjct: 489 FREFKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMT-KEGIRPNVVTYNSIIDAF 546
Score = 38.1 bits (87), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 49 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 108
LL Y W + A+ LF+ VKQ + S + YN + + GQ LVV E KR+
Sbjct: 674 GLLMGYGDNVWVQ-AQSLFDEVKQMDSSTASAFYNALTDMLWHFGQRRGAQLVVLEGKRR 732
Query: 109 NVVPDIFTYNLWISSC 124
+V N+W +SC
Sbjct: 733 HV-----WENMWSNSC 743
>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 612
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 84/186 (45%), Gaps = 2/186 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY +L+ Y K KA+ +F + Q ++ N YN M+ + + +V++ + +E+
Sbjct: 303 TYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEM 362
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
KN++PD+ TYN I + I K +DEM D G D + Y ++++ + +H
Sbjct: 363 HCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMH-DRGVPHDKITYNSILDA-LCKNH 420
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
V+ + L + + Q TY LI G I++ L + +T Y
Sbjct: 421 QVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYT 480
Query: 226 CILSSY 231
++ +
Sbjct: 481 VMIQGF 486
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/127 (20%), Positives = 57/127 (44%), Gaps = 1/127 (0%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
++Y +++ + K ++A LF+ + N+ + + YN ++ G++ +V+E
Sbjct: 337 QSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDE 396
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+ + V D TYN + + +D+ L +M D G D Y L++
Sbjct: 397 MHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMK-DEGIQPDMYTYTILIDGLCKGG 455
Query: 165 HLVNAES 171
L +A++
Sbjct: 456 RLKDAQN 462
>gi|302797114|ref|XP_002980318.1| hypothetical protein SELMODRAFT_112505 [Selaginella moellendorffii]
gi|300151934|gb|EFJ18578.1| hypothetical protein SELMODRAFT_112505 [Selaginella moellendorffii]
Length = 344
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 103/232 (44%), Gaps = 8/232 (3%)
Query: 36 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 95
G+P S S TY L+H+YA A+ ++ A EL+ +S L N ++YN ++ Y S G
Sbjct: 118 GIPFS---SATYAILIHMYAKARDSKAAAELYADYLRSGLEPNLIVYNNVILSYGSSGFP 174
Query: 96 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 155
++ +I++ + PD FTY ISS A + Q +++ ++ +C +
Sbjct: 175 GHAQNILGDIRKAGLAPDRFTYCTLISSWARAGAMLQARRWFNK-ACKTKAGPSIEMCNA 233
Query: 156 LVNIYITASHLVNAE---SSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 212
L++ Y+ A + A+ + + +S + I Y+ +I+ Y G I +
Sbjct: 234 LIDGYLKAREVEPAKFILTKLYADYLRSGLEPNLIVYNNVILSYGSSGFSGHAQNILGDI 293
Query: 213 RMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLL 264
R Y ++SS+ G + + ++ ++ I CN L+
Sbjct: 294 RKAGLAPDRFTYCTLISSWARAGAMLQARRWFNKACKTKAGP-SIEMCNALI 344
>gi|449438627|ref|XP_004137089.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 88/190 (46%), Gaps = 3/190 (1%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV-EKVALVVEEI 105
YT+L+ YA +A +F+++++ + YN ++ +Y +G K+A +V+ +
Sbjct: 223 YTSLITAYASNGRYREAVMVFKKLEEEGCRPTLITYNVILNVYGKMGMPWSKIAGLVDSM 282
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K V PD++TYN ISSC ++ + +EM +G S D V Y L+++Y S
Sbjct: 283 KSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKA-AGFSPDKVTYNALLDVY-GKSR 340
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
L E E S +TY+ LI YA G D+ ++ + K Y
Sbjct: 341 RPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYT 400
Query: 226 CILSSYLMLG 235
+LS + G
Sbjct: 401 TLLSGFEKTG 410
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/249 (19%), Positives = 109/249 (43%), Gaps = 11/249 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY ALL +Y ++ +A E+ + ++ S + + + YN +++ Y G +++ + ++
Sbjct: 328 TYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQM 387
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+K + PD+FTY +S T D K +EM +G + + L+ ++ +
Sbjct: 388 VKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRV-AGCQPNICTFNALIKMHGNRGN 446
Query: 166 LVNA----ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 221
V E + E I +T++ L+ ++ G ++ ++K ++
Sbjct: 447 FVEMMKVFEEIKICECVPDI-----VTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPER 501
Query: 222 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 281
+ ++S+Y G + I + + + D+S N +L A + GL E++ +
Sbjct: 502 DTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTP-DLSTYNAVLAALARGGLWEQSEKVLA 560
Query: 282 LLLQKNCAP 290
+ C P
Sbjct: 561 EMKDGRCKP 569
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 69/168 (41%), Gaps = 2/168 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T A++ +Y + K E+ +K S + + YN +M +Y EK ++ EI
Sbjct: 643 TLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREI 702
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K + PDI ++N I + + + + EM D G + D + Y + Y + S
Sbjct: 703 IAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMK-DFGLAPDVITYNTFIASYASDSM 761
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 213
+ A + Q TY+ LI + L +D+ +LR
Sbjct: 762 FIEAIDVVKYMIKNGCKPNQN-TYNSLIDWFCKLNRRDEASSFISNLR 808
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 105/245 (42%), Gaps = 3/245 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L+ E+A E+FE +K + S + + YN ++ +Y + + V++E+
Sbjct: 293 TYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEM 352
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ P I TYN IS+ A +D+ + +M G D Y L++ + +
Sbjct: 353 EASGFAPSIVTYNSLISAYARDGLLDEAMELKSQM-VKKGIKPDVFTYTTLLSGF-EKTG 410
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ E + Q T++ LI ++ GN ++ ++++ +++ + +
Sbjct: 411 KDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWN 470
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 285
+L+ + G EV + + K++ + N L+ A+S G ++A + +L
Sbjct: 471 TLLAVFGQNGMDSEVSGVFKEMKRAGFVP-ERDTFNTLISAYSRCGFFDQAMAIYRRMLD 529
Query: 286 KNCAP 290
P
Sbjct: 530 AGVTP 534
Score = 44.3 bits (103), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 71/168 (42%), Gaps = 2/168 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY +LLH YA K E+ L E + + A++ ++ +Y + + E+
Sbjct: 573 TYCSLLHAYANGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLEL 632
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ + PDI T N +S + + + L+ + DSG + Y +L+ +Y H
Sbjct: 633 REQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIK-DSGFTPSLTTYNSLMYMYSRTEH 691
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 213
+E L E + I+++ +I Y G + +I+ ++
Sbjct: 692 FEKSE-DILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMK 738
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 49/246 (19%), Positives = 105/246 (42%), Gaps = 5/246 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY A+L A E++E++ +K N L Y ++ Y + +VE+++ + EEI
Sbjct: 538 TYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSALAEEI 597
Query: 106 KRKNVVPD-IFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+ P + L + + L + + FL+ + G S D +V+IY
Sbjct: 598 YSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELR--EQGFSPDITTLNAMVSIY-GRR 654
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
+V+ + L + S TY+ L+ +Y+ + +K + I + + K ++
Sbjct: 655 RMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISF 714
Query: 225 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 284
++ +Y G +KE I + K + D+ N + +++ + +A + ++
Sbjct: 715 NTVIFAYCRNGRMKEASRIFAEMKDFGLAP-DVITYNTFIASYASDSMFIEAIDVVKYMI 773
Query: 285 QKNCAP 290
+ C P
Sbjct: 774 KNGCKP 779
>gi|449453081|ref|XP_004144287.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Cucumis sativus]
gi|449489420|ref|XP_004158306.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Cucumis sativus]
Length = 720
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 115/256 (44%), Gaps = 23/256 (8%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L+ YA E A L ++++ N+ N +++ ++ Y G+ +K V+ E+
Sbjct: 388 TYGLLVDAYANVGRWESARHLLKQMEARNVQPNTFIFSRILASYRDRGEWQKTFEVLREM 447
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K NV PD YN+ I + +D + D M G D V + L++ + H
Sbjct: 448 KNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYDRM-LSEGIEPDVVTWNTLIDCH--RKH 504
Query: 166 LVNAESSTLVEAEKSITQRQWI----TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 221
+ ++ L E + +R ++ TY+ +I LG ++K W +++ KM S
Sbjct: 505 GYHDRAAELFE---EMQERGYLPCPTTYNIMI---NSLGEQEK----WDEVKILLGKMQS 554
Query: 222 RNYICILSSYLML----GHLKEVGEIIDQWKQSATSDFDISAC--NRLLGAFSDVGLTEK 275
+ + + +Y L GH + ID + ++ SA N L+ AF+ GL+E+
Sbjct: 555 QGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATMYNALINAFAQRGLSEQ 614
Query: 276 ANEFHMLLLQKNCAPT 291
A + +++ P+
Sbjct: 615 AVNAYRVMISDGLRPS 630
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 97/235 (41%), Gaps = 19/235 (8%)
Query: 64 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 123
++L+E ++ + + L+ N+++ + G + + ++ + P T+ IS+
Sbjct: 266 QKLYEEIESDKIELDGLLLNDIILGFAKAGDPNRALYFLSMVQASGLNPKTSTFVAVISA 325
Query: 124 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN-LVNIYITASHLVNAESSTLVEAEKSIT 182
++ + +EM GG +K N L+ Y L AES + E EKS
Sbjct: 326 LGNHGRTEEAEAIFEEMK--EGGLKPRIKAFNALLKGYARKGSLKEAES-IISEMEKSGL 382
Query: 183 QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN-------YICILSSYLMLG 235
TY L+ YA +G W+S R ++M +RN + IL+SY G
Sbjct: 383 SPDEHTYGLLVDAYANVGR-------WESARHLLKQMEARNVQPNTFIFSRILASYRDRG 435
Query: 236 HLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
++ E++ + K S D N ++ F + A E + +L + P
Sbjct: 436 EWQKTFEVLREMKNSNVKP-DRHFYNVMIDTFGKFNCLDHAMETYDRMLSEGIEP 489
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
Query: 39 LSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV 98
L+ KTS T+ A++ TE+AE +FE +K+ L +N ++ Y G +++
Sbjct: 312 LNPKTS-TFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGYARKGSLKEA 370
Query: 99 ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
++ E+++ + PD TY L + + A + + L +M
Sbjct: 371 ESIISEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQM 412
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 50/247 (20%), Positives = 101/247 (40%), Gaps = 12/247 (4%)
Query: 47 YTALLHLYAGAKWTEKAEELFER-VKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
Y+ L+H ++E+L+E + + L YN ++ +EK ++ +
Sbjct: 182 YSILIHALG------RSEKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRM 235
Query: 106 KRKNVVPDIFTYNLWISSCAAT--LNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
++ D Y+L I S T ++I ++K +E+ D D + +N + +
Sbjct: 236 RQDGFQSDFINYSLIIQSLTRTNKIDIPLLQKLYEEIESDKIELDGLL--LNDIILGFAK 293
Query: 164 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 223
+ N L + S + T+ +I G ++ + I++ ++ K +
Sbjct: 294 AGDPNRALYFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKA 353
Query: 224 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 283
+ +L Y G LKE II + ++S S D L+ A+++VG E A +
Sbjct: 354 FNALLKGYARKGSLKEAESIISEMEKSGLSP-DEHTYGLLVDAYANVGRWESARHLLKQM 412
Query: 284 LQKNCAP 290
+N P
Sbjct: 413 EARNVQP 419
>gi|168002263|ref|XP_001753833.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694809|gb|EDQ81155.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 779
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 117/280 (41%), Gaps = 6/280 (2%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSETY--TALLHLYAGAKWTEKAEELFERVK 71
Y I +M + + FE +PL+ Y TAL++ Y E + L R+K
Sbjct: 77 YTIMIGIMGREGMLDKASELFEDMPLNDVEWNVYSFTALINAYGRNGQHEASLHLLARMK 136
Query: 72 QSNLSFNALMYNEMMTLYMSVG-QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 130
+ ++ N + YN ++ G + E + + +++ + + PDI TYN +S+C++ +
Sbjct: 137 REKVTPNLITYNTVINACAKGGLEWEGLLGLFAQMRHEGIQPDIITYNTLLSACSSRGLV 196
Query: 131 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 190
++ M+ ++G D + Y LV+IY A L E E++ + Y+
Sbjct: 197 EEAGMVFRTMN-EAGVVPDSITYNALVDIYGQADRHEGV-GELLREMEQAGNAPDVVAYN 254
Query: 191 FLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQS 250
LI Y G +++K ++ + +L +Y G EV + K+
Sbjct: 255 ILIEAYGRAGKYRAAAKMFKQMQEAGCTPDVVTFSTLLEAYGKHGCYDEVRLLFTDMKER 314
Query: 251 ATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
T D++ N L+ F G +++ LL P
Sbjct: 315 GTEP-DVNTYNTLIQVFGQGGFFQESINLFWDLLDGGVEP 353
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/285 (20%), Positives = 108/285 (37%), Gaps = 44/285 (15%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
S TY AL+ +Y A E EL ++Q+ + + + YN ++ Y G+ A + +
Sbjct: 215 SITYNALVDIYGQADRHEGVGELLREMEQAGNAPDVVAYNILIEAYGRAGKYRAAAKMFK 274
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY--- 160
+++ PD+ T++ + + D+V+ +M + G D Y L+ ++
Sbjct: 275 QMQEAGCTPDVVTFSTLLEAYGKHGCYDEVRLLFTDMK-ERGTEPDVNTYNTLIQVFGQG 333
Query: 161 -----------------------ITASHLVNAESSTLVEAEKSITQRQWITY-----DFL 192
A L + L +A K I + +Y D
Sbjct: 334 GFFQESINLFWDLLDGGVEPDMSTYAGLLYSCGKGGLHKAAKKIHRHMLQSYVTPTTDGF 393
Query: 193 IILYAGLGNK---DKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE----IID 245
L GN + + S++ + K Y ++ ++ G E G +ID
Sbjct: 394 TGLITAYGNAALYSEATYAFNSMKESGCKPDLETYNALIGAHAGGGLYCEAGSAYLTMID 453
Query: 246 QWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
+ + D+S N L+ AF GL + A EF + + C+P
Sbjct: 454 EGISA-----DVSTYNSLIEAFGRGGLFDDAIEFSRDMEEARCSP 493
Score = 38.1 bits (87), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 47/102 (46%), Gaps = 1/102 (0%)
Query: 39 LSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV 98
+SA S TY +L+ + + A E ++++ S N Y +M +Y + G ++
Sbjct: 456 ISADVS-TYNSLIEAFGRGGLFDDAIEFSRDMEEARCSPNRHTYEALMGVYCTAGLFDEA 514
Query: 99 ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
+++ +P + +Y L +S CA D K L+EM
Sbjct: 515 KAQFLDLQVGGELPSVDSYCLLLSVCARRNRWDDASKVLEEM 556
>gi|356534408|ref|XP_003535747.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g35130-like [Glycine max]
Length = 357
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 108/257 (42%), Gaps = 15/257 (5%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 102
T+ETYT L++LY A + A LF + N Y ++ ++ G EK V
Sbjct: 40 TTETYTMLINLYGKAGKSFMALILFHEMTTHKCKPNICTYTALVNAFVREGLCEKAEEVF 99
Query: 103 EEIKRKNVVPDIFTYNLWI---------SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKY 153
E+++ + PD++ YN + S ++ + M C+ D Y
Sbjct: 100 EQMQEAGLEPDVYAYNALMETYKFSSPFSRAGYPYGAAEIFSLMQHMGCEP----DRASY 155
Query: 154 VNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 213
LV+ Y A +AE + + ++ ++ L Y+ +GN +K ++I +
Sbjct: 156 NILVDAYGKAGFQDDAE-AVFKDMKRVGITPTMKSHMVLQSAYSKMGNVNKCEEILNQMC 214
Query: 214 MTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLT 273
+ K+ + +L+ Y LG ++ E++ + + + DIS N L+ + G
Sbjct: 215 KSGLKLNTYVLKSMLNLYGRLGQFGKMEEVL-RVMEKGSYVADISTYNILINRYGQAGXI 273
Query: 274 EKANEFHMLLLQKNCAP 290
E+ +F LL K P
Sbjct: 274 ERMEDFFQLLPSKGLKP 290
>gi|449530359|ref|XP_004172163.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 88/190 (46%), Gaps = 3/190 (1%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV-EKVALVVEEI 105
YT+L+ YA +A +F+++++ + YN ++ +Y +G K+A +V+ +
Sbjct: 223 YTSLITAYASNGRYREAVMVFKKLEEEGCRPTLITYNVILNVYGKMGMPWSKIAGLVDSM 282
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K V PD++TYN ISSC ++ + +EM +G S D V Y L+++Y S
Sbjct: 283 KSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKA-AGFSPDKVTYNALLDVY-GKSR 340
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
L E E S +TY+ LI YA G D+ ++ + K Y
Sbjct: 341 RPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYT 400
Query: 226 CILSSYLMLG 235
+LS + G
Sbjct: 401 TLLSGFEKTG 410
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/249 (19%), Positives = 109/249 (43%), Gaps = 11/249 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY ALL +Y ++ +A E+ + ++ S + + + YN +++ Y G +++ + ++
Sbjct: 328 TYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQM 387
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+K + PD+FTY +S T D K +EM +G + + L+ ++ +
Sbjct: 388 VKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRV-AGCQPNICTFNALIKMHGNRGN 446
Query: 166 LVNA----ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 221
V E + E I +T++ L+ ++ G ++ ++K ++
Sbjct: 447 FVEMMKVFEEIKICECVPDI-----VTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPER 501
Query: 222 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 281
+ ++S+Y G + I + + + D+S N +L A + GL E++ +
Sbjct: 502 DTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTP-DLSTYNAVLAALARGGLWEQSEKVLA 560
Query: 282 LLLQKNCAP 290
+ C P
Sbjct: 561 EMKDGRCKP 569
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 73/170 (42%), Gaps = 6/170 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T A++ +Y + K E+ +K S + + YN +M +Y EK ++ EI
Sbjct: 643 TLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREI 702
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K + PDI ++N I + + + + EM D G + D + Y + Y + S
Sbjct: 703 IAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMK-DFGLAPDVITYNTFIASYASDSM 761
Query: 166 LVNAESST--LVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 213
+ A +++ E Q TY+ LI + L +D+ + +LR
Sbjct: 762 FIEAIDVVKYMIKNECKPNQN---TYNSLIDWFCKLNRRDEANSFISNLR 808
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 105/245 (42%), Gaps = 3/245 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L+ E+A E+FE +K + S + + YN ++ +Y + + V++E+
Sbjct: 293 TYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEM 352
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ P I TYN IS+ A +D+ + +M G D Y L++ + +
Sbjct: 353 EASGFAPSIVTYNSLISAYARDGLLDEAMELKSQM-VKKGIKPDVFTYTTLLSGF-EKTG 410
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ E + Q T++ LI ++ GN ++ ++++ +++ + +
Sbjct: 411 KDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWN 470
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 285
+L+ + G EV + + K++ + N L+ A+S G ++A + +L
Sbjct: 471 TLLAVFGQNGMDSEVSGVFKEMKRAGFVP-ERDTFNTLISAYSRCGFFDQAMAIYRRMLD 529
Query: 286 KNCAP 290
P
Sbjct: 530 AGVTP 534
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 75/150 (50%), Gaps = 13/150 (8%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY +L+++Y+ + EK+E++ + + + + +N ++ Y G++++ + + E+
Sbjct: 678 TYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEM 737
Query: 106 KRKNVVPDIFTYNLWISSCAAT---LNIDQVKKFLDEMSCDSGGSD-----DWVKYVNL- 156
K + PD+ TYN +I+S A+ + V K++ + C + DW +N
Sbjct: 738 KDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYMIKNECKPNQNTYNSLIDWFCKLNRR 797
Query: 157 --VNIYITASHLVNAESSTLVEAEKSITQR 184
N +I S+L N + S + E+ + +R
Sbjct: 798 DEANSFI--SNLRNLDPSVTKDEERRLLER 825
Score = 44.3 bits (103), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 71/168 (42%), Gaps = 2/168 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY +LLH YA K E+ L E + + A++ ++ +Y + + E+
Sbjct: 573 TYCSLLHAYANGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLEL 632
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ + PDI T N +S + + + L+ + DSG + Y +L+ +Y H
Sbjct: 633 REQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIK-DSGFTPSLTTYNSLMYMYSRTEH 691
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 213
+E L E + I+++ +I Y G + +I+ ++
Sbjct: 692 FEKSE-DILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMK 738
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 49/246 (19%), Positives = 105/246 (42%), Gaps = 5/246 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY A+L A E++E++ +K N L Y ++ Y + +VE+++ + EEI
Sbjct: 538 TYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSALAEEI 597
Query: 106 KRKNVVPD-IFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+ P + L + + L + + FL+ + G S D +V+IY
Sbjct: 598 YSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELR--EQGFSPDITTLNAMVSIY-GRR 654
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
+V+ + L + S TY+ L+ +Y+ + +K + I + + K ++
Sbjct: 655 RMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISF 714
Query: 225 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 284
++ +Y G +KE I + K + D+ N + +++ + +A + ++
Sbjct: 715 NTVIFAYCRNGRMKEASRIFAEMKDFGLAP-DVITYNTFIASYASDSMFIEAIDVVKYMI 773
Query: 285 QKNCAP 290
+ C P
Sbjct: 774 KNECKP 779
>gi|302819880|ref|XP_002991609.1| hypothetical protein SELMODRAFT_133813 [Selaginella moellendorffii]
gi|300140642|gb|EFJ07363.1| hypothetical protein SELMODRAFT_133813 [Selaginella moellendorffii]
Length = 356
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 107/234 (45%), Gaps = 9/234 (3%)
Query: 64 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 123
+ LF +K ++ YN ++ + G ++KV V+ E+ R+ + PD+F++N I++
Sbjct: 83 DRLFLEIKSRGVALTLRSYNVVICAFTKEGSIDKVEEVIREMIRQELRPDLFSFNALIAA 142
Query: 124 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT- 182
A + ++ + M +G D V Y L+ ++ +S ++ E+ + E E +
Sbjct: 143 YAMSRKPERGLQVFSNMKA-AGVLPDIVTYTTLIQMFSRSS--MHKEAIEMFE-EMVVNK 198
Query: 183 -QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVG 241
Q + Y L+ +Y G I+ L++ + Y ++S++L G L+E
Sbjct: 199 CQPDFFVYSLLVSVYGKAGLVADALLIFHRLQLEGHRPNIVTYTSLISAHLHKGLLEESR 258
Query: 242 EIIDQWKQSATSDFDISACNRLLGAFSDVGLT-EKANEFHMLLLQKNCAPTNAS 294
+ Q + D+ N ++ A++ G+ + AN H L Q C P AS
Sbjct: 259 KHFSQMEAYGCRA-DVHLLNTMIDAYAKAGMVNDAANLLHRLTAQGVC-PNRAS 310
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 58/118 (49%), Gaps = 5/118 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT L+ +++ + ++A E+FE + + + +Y+ ++++Y G V L+ +
Sbjct: 170 TYTTLIQMFSRSSMHKEAIEMFEEMVVNKCQPDFFVYSLLVSVYGKAGLVADALLIFHRL 229
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
+ + P+I TY IS+ +++ +K +M +D V+L+N I A
Sbjct: 230 QLEGHRPNIVTYTSLISAHLHKGLLEESRKHFSQMEAYGCRAD-----VHLLNTMIDA 282
>gi|357123295|ref|XP_003563347.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Brachypodium distachyon]
Length = 800
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 117/254 (46%), Gaps = 14/254 (5%)
Query: 35 EGLPLSAKTS----ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYM 90
E LPL + YT +LH + E+A ELF +K+ ++ +MYN M+ +Y
Sbjct: 174 EMLPLPPGSPGLDVRAYTTVLHALSHEGRYERALELFAELKREGVAPTHVMYNVMLDVYG 233
Query: 91 SVGQV-EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDD 149
+G+ ++ ++EE++ V PD FT + I++C +D+ F +++ G
Sbjct: 234 RMGRSWPQIVAMLEEMRAAGVEPDGFTASTVIAACGRDGLVDEAVAFFEDLK-SRGHVPC 292
Query: 150 WVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIW 209
V Y L+ ++ A + + A L E E+S + +TY+ L YA G ++ +
Sbjct: 293 VVTYNALLQVFGKAGNYMEA-LRVLKEMEESGCKPDAVTYNELAGSYARAGFYEEAAKCL 351
Query: 210 KSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSD 269
++ + Y I+++Y G + E + D K++ + ++ N +LG
Sbjct: 352 DTMVSKGILPNAFTYNTIMTAYGNAGKVDEALALFDWMKKNGFIPY-VNTYNLILGMLG- 409
Query: 270 VGLTEKANEFHMLL 283
K + F+++L
Sbjct: 410 -----KKSRFNVML 418
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/229 (19%), Positives = 99/229 (43%), Gaps = 9/229 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY ALL ++ A +A + + +++S +A+ YNE+ Y G E+ A ++ +
Sbjct: 295 TYNALLQVFGKAGNYMEALRVLKEMEESGCKPDAVTYNELAGSYARAGFYEEAAKCLDTM 354
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI---YIT 162
K ++P+ FTYN +++ +D+ D M + ++ YVN N+ +
Sbjct: 355 VSKGILPNAFTYNTIMTAYGNAGKVDEALALFDWMK-----KNGFIPYVNTYNLILGMLG 409
Query: 163 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 222
N L E +S +T++ ++ + G + + ++ + ++ ++
Sbjct: 410 KKSRFNVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEGYVTRVLERMKSCGVELCRD 469
Query: 223 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 271
+ ++S+Y G ++ D+ + + ++ N LL S G
Sbjct: 470 TFNTLISAYGRCGSRANAFKMYDEMTAAGFTPC-LTTYNALLSVLSRQG 517
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 57/116 (49%), Gaps = 1/116 (0%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
+ ++L +YA KA E+F+ +KQ LS + + YN MM +Y + + +++ +K
Sbjct: 611 FNSMLSMYAKNGMYRKAGEMFDSIKQGGLSPDLITYNSMMDMYAKSNESWEAEKILKRLK 670
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 162
+ PD+ +YN ++ I + ++ L EM D G V Y LV Y +
Sbjct: 671 TSQLKPDVVSYNTVMNGFCKQGLIKEAQRILSEMIAD-GVRPCVVTYHTLVGGYAS 725
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 99/221 (44%), Gaps = 18/221 (8%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L YA A + E+A + + + + NA YN +MT Y + G+V++ + + +
Sbjct: 330 TYNELAGSYARAGFYEEAAKCLDTMVSKGILPNAFTYNTIMTAYGNAGKVDEALALFDWM 389
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K+ +P + TYNL + + + + L EMS SG + + V + + + +
Sbjct: 390 KKNGFIPYVNTYNLILGMLGKKSRFNVMLEMLGEMS-RSGCTPNRVTWNTM--LAVCGKR 446
Query: 166 LVNAESSTLVEAEKSI-TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
+ + ++E KS + T++ LI Y G++ +++ +MT+ +
Sbjct: 447 GMEGYVTRVLERMKSCGVELCRDTFNTLISAYGRCGSRANAFKMY-------DEMTAAGF 499
Query: 225 ICILSSY-LMLGHLKEVGE------IIDQWKQSATSDFDIS 258
L++Y +L L G+ II++ K D+S
Sbjct: 500 TPCLTTYNALLSVLSRQGDWTAAQSIINKMKNEGFKPNDMS 540
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 50/95 (52%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY +++ +YA + + +AE++ +R+K S L + + YN +M + G +++ ++ E+
Sbjct: 645 TYNSMMDMYAKSNESWEAEKILKRLKTSQLKPDVVSYNTVMNGFCKQGLIKEAQRILSEM 704
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
V P + TY+ + A+ + ++ + M
Sbjct: 705 IADGVRPCVVTYHTLVGGYASREMFSEAREVVSYM 739
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 48/250 (19%), Positives = 104/250 (41%), Gaps = 13/250 (5%)
Query: 46 TYTALLH-LYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
TY ALL L WT A+ + ++K N + Y+ ++ + G + + +E
Sbjct: 505 TYNALLSVLSRQGDWT-AAQSIINKMKNEGFKPNDMSYSLLLQCHAKGGNAAGIEAIEKE 563
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+ V P + S ++ +++ E+ G D V + +++++Y
Sbjct: 564 VYEGTVFPSWVILRTLVISNFKCRRLEGIERAFQEVMA-RGHKPDLVIFNSMLSMYAK-- 620
Query: 165 HLVNAESSTLVEAEKSITQ----RQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 220
N E SI Q ITY+ ++ +YA + ++I K L+ ++ K
Sbjct: 621 ---NGMYRKAGEMFDSIKQGGLSPDLITYNSMMDMYAKSNESWEAEKILKRLKTSQLKPD 677
Query: 221 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 280
+Y +++ + G +KE I+ + ++ + L+G ++ + +A E
Sbjct: 678 VVSYNTVMNGFCKQGLIKEAQRILSEMIADGVRPCVVTY-HTLVGGYASREMFSEAREVV 736
Query: 281 MLLLQKNCAP 290
++Q+N +P
Sbjct: 737 SYMIQRNLSP 746
>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
Length = 814
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 103/234 (44%), Gaps = 3/234 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY++++H A+ +KAE ++ + N YN ++ Y S GQ ++ V +E+
Sbjct: 256 TYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM 315
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+R +++PD+ T ++ + S I + + D M+ G + + Y ++N Y T
Sbjct: 316 RRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAM-KGQNPNVFSYTIMLNGYATKGC 374
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
LV+ + I + T++ LI YA G DK I+ +R K Y
Sbjct: 375 LVDMTDLFDLMLGDGIAPDIY-TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYR 433
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 279
++++ +G + + E +Q + D A + L+ F G KA E
Sbjct: 434 TVIAALCRIGKMDDAMEKFNQMIDQGVAP-DKYAYHCLIQGFCTHGSLLKAKEL 486
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 45/233 (19%), Positives = 98/233 (42%), Gaps = 5/233 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSN--LSFNALMYNEMMTLYMSVGQVEKVALVVE 103
+Y+ LL + +A++L + + S + + Y+ ++ + G V K + +
Sbjct: 184 SYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFK 243
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
E+ ++ + PD TY+ + + +D+ + FL +M ++W Y NL+ Y +
Sbjct: 244 EMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWT-YNNLIYGYSST 302
Query: 164 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 223
A E + +T L+ G + ++ ++ M Q +
Sbjct: 303 GQWKEA-VRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFS 361
Query: 224 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
Y +L+ Y G L ++ ++ D + DI N L+ A+++ G+ +KA
Sbjct: 362 YTIMLNGYATKGCLVDMTDLFDLMLGDGIAP-DIYTFNVLIKAYANCGMLDKA 413
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 54/293 (18%), Positives = 106/293 (36%), Gaps = 39/293 (13%)
Query: 35 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 94
+G + + TS TY L+ A E A F ++ ++ L N ++ N ++ + +
Sbjct: 102 QGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKR 161
Query: 95 V-EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM------------- 140
E + +++ VPD+F+Y++ + S Q L M
Sbjct: 162 TDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVA 221
Query: 141 ----------------SCD-------SGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA 177
+CD G D+V Y ++V+ A + AE+
Sbjct: 222 YSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMV 281
Query: 178 EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHL 237
K + W TY+ LI Y+ G + +++K +R ++ S G +
Sbjct: 282 NKGVLPNNW-TYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKI 340
Query: 238 KEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
KE ++ D + ++ + +L ++ G + L+L AP
Sbjct: 341 KEARDVFDTMAMKGQNP-NVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAP 392
>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
Length = 895
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 87/194 (44%), Gaps = 7/194 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY+ + + A+ + A+++FE +++ + + N + YN M++ G VE+ EE+
Sbjct: 245 TYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEM 304
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ PD FTY ++ + + K LDEMSC SG + V Y LV+ ++
Sbjct: 305 VDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSC-SGLKPNIVVYGTLVDGFMKEGK 363
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
A L E + Q I YD LI +G + ++ K + + + Y
Sbjct: 364 TAEA-FDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTY- 421
Query: 226 CILSSYLMLGHLKE 239
+ LM GH ++
Sbjct: 422 ----NPLMQGHFQQ 431
Score = 44.7 bits (104), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 55/102 (53%), Gaps = 1/102 (0%)
Query: 63 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 122
A E E++ ++N+ + YN ++ +VG++E+ +++++ +VPD FTY+ I
Sbjct: 507 ACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIH 566
Query: 123 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
T N+++ + L +M +SG + Y +L+ Y ++
Sbjct: 567 GYCKTGNLEKADQLLRQM-LNSGLKPNADTYTDLLEGYFKSN 607
Score = 43.9 bits (102), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 91/202 (45%), Gaps = 8/202 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY+ L+H Y EKA++L ++ S L NA Y +++ Y EKV+ +++ +
Sbjct: 560 TYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSM 619
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
PD Y + I + + + N++ L E+ +G D Y +L++ +
Sbjct: 620 LGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVE-KNGLVPDLHIYSSLISGLCKIAD 678
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ A L E K + + Y+ LI + G+ + ++ S+ + K + +
Sbjct: 679 MEKA-VGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSI-LAKGLVPN---- 732
Query: 226 CILSSYLMLGHLKEVGEIIDQW 247
C+ + L+ G+ K G+I D +
Sbjct: 733 CVTYTALIDGNCKN-GDITDAF 753
Score = 43.9 bits (102), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 83/199 (41%), Gaps = 2/199 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L+ + + A EL ++ S + N Y M+ G+ ++ ++EE+
Sbjct: 420 TYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEM 479
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ + P+ F Y I + NI + L++M+ + D Y +L+ T
Sbjct: 480 ISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMT-KANVHPDLFCYNSLIKGLSTVGR 538
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ AE ++ + ++ TY LI Y GN +K DQ+ + + + K + Y
Sbjct: 539 MEEAEEYYAQVQKRGLVPDEF-TYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYT 597
Query: 226 CILSSYLMLGHLKEVGEII 244
+L Y ++V I+
Sbjct: 598 DLLEGYFKSNDYEKVSSIL 616
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 72/165 (43%), Gaps = 2/165 (1%)
Query: 60 TEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNL 119
+++A L E + L NA MY ++ + G + +E++ + NV PD+F YN
Sbjct: 469 SKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNS 528
Query: 120 WISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK 179
I + +++ +++ ++ G D Y L++ Y +L A+ L +
Sbjct: 529 LIKGLSTVGRMEEAEEYYAQVQ-KRGLVPDEFTYSGLIHGYCKTGNLEKAD-QLLRQMLN 586
Query: 180 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
S + TY L+ Y + +K+ I +S+ + K + Y
Sbjct: 587 SGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIY 631
Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/94 (20%), Positives = 42/94 (44%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y AL+ + + +A +F+ + L N + Y ++ G + + +E+
Sbjct: 701 YNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEML 760
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
+ + PD F YN+ + C+ +++Q +EM
Sbjct: 761 DRGIAPDAFVYNVLATGCSDAADLEQALFLTEEM 794
>gi|222625337|gb|EEE59469.1| hypothetical protein OsJ_11675 [Oryza sativa Japonica Group]
Length = 1095
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 105/244 (43%), Gaps = 3/244 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY+ALL+ Y A +L + ++ ++S N MY ++ + +G+V K +++ +
Sbjct: 406 TYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCM 465
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ PD+ TY+ I+ I + K+ L M SG + V Y LV + A H
Sbjct: 466 LADGIDPDVITYSALINGMCKMGMIHETKEILSRMQ-KSGVLPNNVLYTTLVFYFCKAGH 524
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
A V+ +S + ++ L+ + G + +Q + + K ++
Sbjct: 525 AKEA-LKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFN 583
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 285
CI+ SY G++ E + D + DI LL G +A EF + LL+
Sbjct: 584 CIIDSYCQRGNVLEAFSVYDNMVRHGWPP-DICTYGSLLRGLCQGGHLVQAKEFMVYLLE 642
Query: 286 KNCA 289
K CA
Sbjct: 643 KACA 646
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 88/207 (42%), Gaps = 2/207 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY ++ K + +A L +R+++ NL+ + YN ++ + G++ + ++
Sbjct: 301 TYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQM 360
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
R+++ P + TY I D+ ++ L EM +G + Y L+N Y S
Sbjct: 361 LRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQI-TGVRPSELTYSALLNGYCKHSK 419
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
L A +SI+ + + Y LI + LG K QI K + Y
Sbjct: 420 LGPALDLIKYLRSRSISINRTM-YTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYS 478
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSAT 252
+++ +G + E EI+ + ++S
Sbjct: 479 ALINGMCKMGMIHETKEILSRMQKSGV 505
Score = 44.3 bits (103), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 43/229 (18%), Positives = 96/229 (41%), Gaps = 4/229 (1%)
Query: 62 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 121
KAE + +++K L NA+ YN ++ Y+ G+ + +++++++ + D++TYN+ I
Sbjct: 248 KAESMLQKMKNCRLP-NAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMI 306
Query: 122 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI 181
+ L M + + D Y L++ + +N + +
Sbjct: 307 DKLCKLKRSARAYLLLKRMR-EVNLTPDECSYNTLIHGFFGEGK-INLAIYIFNQMLRQS 364
Query: 182 TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVG 241
+ TY LI Y G D+ ++ +++T + + Y +L+ Y L
Sbjct: 365 LKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPAL 424
Query: 242 EIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
++I ++ +S + + + L+ F +G KA + +L P
Sbjct: 425 DLI-KYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCMLADGIDP 472
>gi|297800434|ref|XP_002868101.1| hypothetical protein ARALYDRAFT_915040 [Arabidopsis lyrata subsp.
lyrata]
gi|297313937|gb|EFH44360.1| hypothetical protein ARALYDRAFT_915040 [Arabidopsis lyrata subsp.
lyrata]
Length = 495
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 123/278 (44%), Gaps = 36/278 (12%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M K F + DY+ R+ L+ V G+ E++F+ +P + Y LL Y ++ T
Sbjct: 93 MGEQKVFDIVPEDYSARLHLVENVLGLEEAEKFFKSIPKNMTDYFVYATLLSSYTKSENT 152
Query: 61 -EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNL 119
+KAE FE++++ +N M++LY + +++ V +V E++ V D T N
Sbjct: 153 LDKAEATFEKMRELGFLLKPSPFNSMISLYGQLQKLDMVEKLVREMQETKVECDSPTVNN 212
Query: 120 WISSCAATLNIDQVKKF---LDEMSCD-SGGSDDWVKYVNLVNIYITASHLVNAESSTLV 175
+ A T I ++ F +DE GG+ V + Y+ + +
Sbjct: 213 VLRVYADTCKIKAMETFKTWVDEQGIKLEGGT-----IVAMAKAYLRSGSI--------- 258
Query: 176 EAEKSITQRQWITYDFLIILYAGL-GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLML 234
EK+I +Y + G++ ++ ++W + + K+ Y +LSS L L
Sbjct: 259 --EKAIE------------MYGNVAGSEKEVYRLWDEYK-KETKVNDNGYRTVLSSLLKL 303
Query: 235 GHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGL 272
+++ +I ++WK D+S + LL + G+
Sbjct: 304 DNVQGAEKIYEEWKPEG-PKLDMSIPSLLLSRYYAEGM 340
>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 113/263 (42%), Gaps = 5/263 (1%)
Query: 30 GERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMT 87
G R+FE + + TY ++ Y K ++A +L + L N L YN ++
Sbjct: 222 GLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVIN 281
Query: 88 LYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGS 147
VG++E+ + V+ E+ RK PD TYN ++ N Q EM +G
Sbjct: 282 GLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEM-LRNGLP 340
Query: 148 DDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQ 207
D V Y +L+N A +L N + + +TY LI ++ G D+ +
Sbjct: 341 PDVVTYTSLINTMCKAGNL-NRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYR 399
Query: 208 IWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAF 267
IW + + T Y +L+ + + G ++E ++ + S D+ + + ++ F
Sbjct: 400 IWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSP-DVVSYSTIIAGF 458
Query: 268 SDVGLTEKANEFHMLLLQKNCAP 290
++A + + +++K +P
Sbjct: 459 CRYQELDRAFQMNAEMVEKGVSP 481
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 88/214 (41%), Gaps = 3/214 (1%)
Query: 63 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 122
AE+++ + S +S N YN ++ + + G +E EE++R +P++ TYN I
Sbjct: 187 AEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIG 246
Query: 123 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT 182
+ ID+ K L M + G + + Y ++N + S L E ++
Sbjct: 247 AYCKLKRIDEAFKLLRSMGLE-GLEPNLLTYNMVINGLCRVGR-IEETSGVLAEMDRKGF 304
Query: 183 QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 242
+TY+ L+ Y +GN + + + Y ++++ G+L E
Sbjct: 305 APDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAME 364
Query: 243 IIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
DQ ++ + L+ FS G ++A
Sbjct: 365 FFDQMHVRGLRPNGVTYTS-LINGFSQKGFMDEA 397
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 97/233 (41%), Gaps = 7/233 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+Y L+ + A E FE ++++ N + YN ++ Y + ++++ ++ +
Sbjct: 205 SYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSM 264
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ + P++ TYN+ I+ I++ L EM G + D V Y LVN Y
Sbjct: 265 GLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMD-RKGFAPDGVTYNTLVNGYCKVG- 322
Query: 166 LVNAESSTLVEAE--KSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 223
N + ++ +E ++ +TY LI GN ++ + + + + +
Sbjct: 323 --NFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVT 380
Query: 224 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
Y +++ + G + E I D+ +S I N LL G E+A
Sbjct: 381 YTSLINGFSQKGFMDEAYRIWDEMIRSGFPP-TIVTYNALLNGHCVSGRMEEA 432
>gi|297724361|ref|NP_001174544.1| Os05g0583900 [Oryza sativa Japonica Group]
gi|42491383|gb|AAS16889.1| hypothetical protein [Oryza sativa Japonica Group]
gi|255676609|dbj|BAH93272.1| Os05g0583900 [Oryza sativa Japonica Group]
Length = 467
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 114/268 (42%), Gaps = 5/268 (1%)
Query: 27 IHSGERYFEGLPLS--AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNE 84
+ R F+ +PL A TYTAL+H Y EK LFE +++ + N YN
Sbjct: 54 VAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNC 113
Query: 85 MMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS 144
++ + G+ E+ + +E+ + +V ++ +YN I+ + K LD M +
Sbjct: 114 LIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTE- 172
Query: 145 GGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDK 204
G + + LV+ Y A + NA + + + Q +TY+ LI + + +
Sbjct: 173 GTRPSIITFNLLVDGYGKAGKMSNA-LPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTR 231
Query: 205 IDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLL 264
++ ++ + T Y ++ S+ H+ + EI+ +++ + D L+
Sbjct: 232 ANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGL-EVDAHTYGVLV 290
Query: 265 GAFSDVGLTEKANEFHMLLLQKNCAPTN 292
A G + A + + +K P+N
Sbjct: 291 RALCMEGNMKDARKLFQSMGEKGVEPSN 318
>gi|115456295|ref|NP_001051748.1| Os03g0824100 [Oryza sativa Japonica Group]
gi|113550219|dbj|BAF13662.1| Os03g0824100, partial [Oryza sativa Japonica Group]
Length = 691
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 115/285 (40%), Gaps = 31/285 (10%)
Query: 34 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLS-------FNALM----- 81
F LP ++T+ +YT+L+ YA E+A EL +++K S ++ F+ L+
Sbjct: 2 FHDLPSESRTALSYTSLIAAYARNALHEEARELLDQMKASGVAPTDPPVPFDMLLGLFAE 61
Query: 82 ---------------YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAA 126
YN ++ ++ +++ + V+PD +Y + + A
Sbjct: 62 MRHDPSPSVRPDLTTYNTLLAAAAVRALSDQSEMLLRTMLEAGVLPDTASYRHIVDAFAG 121
Query: 127 TLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQW 186
N+ +V + EMS +G + D Y+ L+ + A + L + +
Sbjct: 122 AGNLSRVAELFAEMSA-TGHTPDPSAYLGLMEAHTLVGATAEA-VAVLRQMQADGCPPTA 179
Query: 187 ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 246
TY L+ LY G D + ++++ +R T T+ Y + + G KEV E+
Sbjct: 180 ATYRVLLDLYGRQGRFDGVRELFREMRTTVPPDTA-TYNVLFRVFGDGGFFKEVVELFQD 238
Query: 247 WKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 291
S DI C ++ A GL E A E + + PT
Sbjct: 239 MLHSEVEP-DIDTCENVMVACGRGGLHEDAREVLDYITTEGMVPT 282
>gi|222632709|gb|EEE64841.1| hypothetical protein OsJ_19698 [Oryza sativa Japonica Group]
Length = 496
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 114/268 (42%), Gaps = 5/268 (1%)
Query: 27 IHSGERYFEGLPLS--AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNE 84
+ R F+ +PL A TYTAL+H Y EK LFE +++ + N YN
Sbjct: 54 VAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNC 113
Query: 85 MMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS 144
++ + G+ E+ + +E+ + +V ++ +YN I+ + K LD M +
Sbjct: 114 LIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTE- 172
Query: 145 GGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDK 204
G + + LV+ Y A + NA + + + Q +TY+ LI + + +
Sbjct: 173 GTRPSIITFNLLVDGYGKAGKMSNA-LPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTR 231
Query: 205 IDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLL 264
++ ++ + T Y ++ S+ H+ + EI+ +++ + D L+
Sbjct: 232 ANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGL-EVDAHTYGVLV 290
Query: 265 GAFSDVGLTEKANEFHMLLLQKNCAPTN 292
A G + A + + +K P+N
Sbjct: 291 RALCMEGNMKDARKLFQSMGEKGVEPSN 318
>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
Length = 816
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 101/235 (42%), Gaps = 5/235 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY++++H A+ +KAE ++ + + YN ++ Y S GQ ++ V +E+
Sbjct: 258 TYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEM 317
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+R++++PD+ N + S I + + D M+ G + D Y ++N Y T
Sbjct: 318 RRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAM-KGQNPDVFSYTIMLNGYATKGC 376
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
LV+ + I T++ LI YA G DK I+ +R K Y+
Sbjct: 377 LVDMTDLFDLMLGDGIAP-VICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYM 435
Query: 226 CILSSYLMLGHLKEVGEIIDQW-KQSATSDFDISACNRLLGAFSDVGLTEKANEF 279
++++ +G + + E +Q Q D C L+ F G KA E
Sbjct: 436 TVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHC--LIQGFCTHGSLLKAKEL 488
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 104/238 (43%), Gaps = 15/238 (6%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSN--LSFNALMYNEMMTLYMSVGQVEKVALVVE 103
+Y LL + +A++L + + S + + YN ++ + G V K + +
Sbjct: 186 SYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFK 245
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
E+ ++ + PD+ TY+ + + +D+ + FL +M D+W Y NL+ Y +
Sbjct: 246 EMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWT-YNNLIYGYSST 304
Query: 164 SHLVNAESSTLVEAEKSITQRQWITYDFLII--LYAGLGNKDKIDQ---IWKSLRMTKQK 218
A V K + +RQ I D + + L L KI + ++ ++ M Q
Sbjct: 305 GQWKEA-----VRVFKEM-RRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQN 358
Query: 219 MTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
+Y +L+ Y G L ++ ++ D + I N L+ A+++ G+ +KA
Sbjct: 359 PDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPV-ICTFNVLIKAYANCGMLDKA 415
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 50/250 (20%), Positives = 101/250 (40%), Gaps = 12/250 (4%)
Query: 35 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 94
+G + + TS TY L+ A E A F ++ ++ L +A++ + ++ + +
Sbjct: 104 QGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKR 163
Query: 95 V-EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGG---SDDW 150
E + +++ VPD+F+YN+ + S Q L M+ GG S D
Sbjct: 164 TDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMA--EGGTVCSPDV 221
Query: 151 VKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK 210
V Y +++ + VN E + +TY ++ DK + +
Sbjct: 222 VAYNTVIDGFFKEGD-VNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLR 280
Query: 211 SLRMTKQKMTSRN--YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFS 268
+M + + N Y ++ Y G KE + + ++ + D+ A N L+G+
Sbjct: 281 --QMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILP-DVVALNTLMGSLC 337
Query: 269 DVGLTEKANE 278
G ++A +
Sbjct: 338 KYGKIKEARD 347
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 41/228 (17%), Positives = 101/228 (44%), Gaps = 11/228 (4%)
Query: 14 YATRIDL--MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVK 71
YAT+ L MT +F + G+ G+ A T+ L+ YA +KA +F ++
Sbjct: 371 YATKGCLVDMTDLFDLMLGD----GI---APVICTFNVLIKAYANCGMLDKAMIIFNEMR 423
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
+ + + Y ++ +G+++ ++ + VVPD + Y+ I ++
Sbjct: 424 DHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLL 483
Query: 132 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 191
+ K+ + E+ ++G D V + +++N +++A++ + + + Y+
Sbjct: 484 KAKELISEIM-NNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGL-HPDAVVYNM 541
Query: 192 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 239
L+ Y +G +K +++ ++ + Y +++ Y +G + E
Sbjct: 542 LMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDE 589
>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Brachypodium distachyon]
Length = 897
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 84/193 (43%), Gaps = 7/193 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY+ L + A+ + A+++FE +++ + + N + YN M++ G VE+ EE+
Sbjct: 247 TYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEM 306
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ PD FTY ++ + + K LDEMSC SG + V Y LV+ ++
Sbjct: 307 VDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSC-SGLKPNVVVYATLVDGFMKEGK 365
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
A L E + Q I YD LI +G + ++ + + + Y
Sbjct: 366 AAEA-FDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTY- 423
Query: 226 CILSSYLMLGHLK 238
LM GH +
Sbjct: 424 ----HPLMQGHFQ 432
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 105/236 (44%), Gaps = 10/236 (4%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVK 71
Y + I ++ V I E Y+ + + TY+ L+H Y + EKA++L +++
Sbjct: 528 YNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQML 587
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
S L NA Y +++ Y EKV+ +++ + PD Y + I + + + N++
Sbjct: 588 NSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENME 647
Query: 132 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 191
L E+ +G D Y +L++ + + A L E K + + Y+
Sbjct: 648 VAFMVLTEVE-KNGLVPDLHIYSSLISGLCKMADMEKA-VGLLDEMAKEGLEPGIVCYNA 705
Query: 192 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQW 247
LI + G+ + ++ S+ + K + + C+ + L+ G+ K G+I D +
Sbjct: 706 LIDGFCRSGDISRARNVFDSI-LAKGLLPN----CVTYTALIDGNCKN-GDITDAF 755
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 77/179 (43%), Gaps = 2/179 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY +++ +++A L E + L NA MY ++ + G + +E +
Sbjct: 457 TYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENM 516
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ NV+PD+F YN I + I++ +++ ++ G D Y L++ Y +
Sbjct: 517 TKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQ-KRGLVPDEFTYSGLIHGYCKTRN 575
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
L A+ L + S + TY L+ Y + +K+ I +S+ + K + Y
Sbjct: 576 LEKAD-QLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIY 633
>gi|222630937|gb|EEE63069.1| hypothetical protein OsJ_17877 [Oryza sativa Japonica Group]
Length = 702
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 99/215 (46%), Gaps = 3/215 (1%)
Query: 38 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV-E 96
P S YT +LH + A E+A +LF +++ + + YN ++ +Y +G+
Sbjct: 83 PGSRLDVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWP 142
Query: 97 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 156
++ ++EE++ V PD FT + I++C +DQ F +++ G V Y L
Sbjct: 143 RIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKA-RGHVPCVVTYNAL 201
Query: 157 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 216
+ ++ A + A L E E S Q +TY+ L YA G ++ + ++
Sbjct: 202 LQVFGKAGNYTEA-LRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKG 260
Query: 217 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 251
+ Y ++++Y +G + E + D+ K++
Sbjct: 261 LLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNG 295
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 106/252 (42%), Gaps = 9/252 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY ALL ++ A +A + + ++ S +A+ YNE+ Y G E+ A ++ +
Sbjct: 197 TYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTM 256
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI---YIT 162
K ++P+ FTYN +++ A +D+ D M + +V VN N+ +
Sbjct: 257 TSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMK-----KNGYVPNVNTYNLIFGMLG 311
Query: 163 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 222
A L E +S +T++ ++ + G +D + ++ ++ +++
Sbjct: 312 KKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRD 371
Query: 223 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 282
Y ++S+Y G ++ D+ S + ++ N LL S G A
Sbjct: 372 TYNTLISAYGRCGSRTYAFKMYDEMISSGFTPC-LTTYNALLNVLSRQGDWSTAQSIVSK 430
Query: 283 LLQKNCAPTNAS 294
+L+ P + S
Sbjct: 431 MLKNGFKPNDQS 442
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
+ ++L +YA KA E+F+ +KQS LS + + YN +M +Y + + +++++K
Sbjct: 513 FNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLK 572
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 162
V PD+ +YN I+ I + ++ L EM D G + V Y LV Y +
Sbjct: 573 SSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIAD-GMAPCVVTYHTLVGGYAS 627
Score = 40.4 bits (93), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 59/139 (42%), Gaps = 2/139 (1%)
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
E E+ F+ VK + +++N M+ +Y G K + + IK+ + PD+ TYN
Sbjct: 492 EGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSL 551
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
+ A + + +K L ++ S D V Y ++N + L+ L E
Sbjct: 552 MDMYAKSNESWEAEKILKQLK-SSQVKPDVVSYNTVINGFCKQG-LIKEAQRILSEMIAD 609
Query: 181 ITQRQWITYDFLIILYAGL 199
+TY L+ YA L
Sbjct: 610 GMAPCVVTYHTLVGGYASL 628
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/95 (18%), Positives = 52/95 (54%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY +L+ +YA + + +AE++ +++K S + + + YN ++ + G +++ ++ E+
Sbjct: 547 TYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEM 606
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
+ P + TY+ + A+ ++ ++ ++ M
Sbjct: 607 IADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYM 641
>gi|115444491|ref|NP_001046025.1| Os02g0170000 [Oryza sativa Japonica Group]
gi|49388067|dbj|BAD25179.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113535556|dbj|BAF07939.1| Os02g0170000 [Oryza sativa Japonica Group]
Length = 397
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 103/236 (43%), Gaps = 6/236 (2%)
Query: 36 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 95
G+P +A Y A L A+ TEKA E+++R+K+ N + M+ +Y Q
Sbjct: 42 GIPPNATV---YNAYLDGLLKARCTEKAVEVYQRMKRERCRANTETFTLMINVYGKAKQP 98
Query: 96 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 155
V E+K P+I TY +++ A ++ ++ +EM +G D Y
Sbjct: 99 MSSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQ-QAGHEPDVYAYNA 157
Query: 156 LVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMT 215
L+ Y A L S + + +Y+ L+ Y G + + +++ L+
Sbjct: 158 LMEAYSRAG-LPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHEDAEAVFEELKQR 216
Query: 216 KQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 271
T ++++ +L+++ G+ E++ Q +S + D A N +L A++ G
Sbjct: 217 GMSPTMKSHMLLLAAHARSGNATRCEEVMAQLHKSGLTP-DTFALNAMLNAYARAG 271
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 97/233 (41%), Gaps = 14/233 (6%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
+ET+T ++++Y AK + ++F +K N Y ++ + G EK V E
Sbjct: 82 TETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFE 141
Query: 104 EIKRKNVVPDIFTYNLWI---SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
E+++ PD++ YN + S ++ + M C+ D Y LV+ Y
Sbjct: 142 EMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGCEP----DRASYNILVDAY 197
Query: 161 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 220
A +AE + E ++ ++ L+ +A GN + +++ L K +T
Sbjct: 198 GRAGLHEDAE-AVFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVMAQLH--KSGLT 254
Query: 221 SRNYI--CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 271
+ +L++Y G L ++ + ++ D D+ N + A+ G
Sbjct: 255 PDTFALNAMLNAYARAGRLDDMERLFAAMERR--GDADVGTYNVAVNAYGRAG 305
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 40/214 (18%), Positives = 82/214 (38%), Gaps = 40/214 (18%)
Query: 82 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 141
Y ++ Y + G + + V+ E++ + P+ YN ++ ++ + M
Sbjct: 15 YALLLRAYCNAGSLHRAEGVISEMREHGIPPNATVYNAYLDGLLKARCTEKAVEVYQRMK 74
Query: 142 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWI-TYDFLIILYAGLG 200
+ ++ + ++N+Y A ++ S + KSI + I TY L+ +A G
Sbjct: 75 RERCRANTET-FTLMINVYGKAKQPMS--SMKVFNEMKSIGCKPNICTYTALVNAFAREG 131
Query: 201 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 260
+K +++++ + Q A + D+ A
Sbjct: 132 LCEKAEEVFEEM------------------------------------QQAGHEPDVYAY 155
Query: 261 NRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
N L+ A+S GL + A+E L+ C P AS
Sbjct: 156 NALMEAYSRAGLPQGASEIFSLMQHMGCEPDRAS 189
>gi|125551633|gb|EAY97342.1| hypothetical protein OsI_19265 [Oryza sativa Indica Group]
Length = 793
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 99/215 (46%), Gaps = 3/215 (1%)
Query: 38 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV-E 96
P S YT +LH + A E+A +LF +++ + + YN ++ +Y +G+
Sbjct: 174 PGSRLDVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWP 233
Query: 97 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 156
++ ++EE++ V PD FT + I++C +DQ F +++ G V Y L
Sbjct: 234 RIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKA-RGHVPCVVTYNAL 292
Query: 157 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 216
+ ++ A + A L E E S Q +TY+ L YA G ++ + ++
Sbjct: 293 LQVFGKAGNYTEA-LRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKG 351
Query: 217 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 251
+ Y ++++Y +G + E + D+ K++
Sbjct: 352 LLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNG 386
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 106/252 (42%), Gaps = 9/252 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY ALL ++ A +A + + ++ S +A+ YNE+ Y G E+ A ++ +
Sbjct: 288 TYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTM 347
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI---YIT 162
K ++P+ FTYN +++ A +D+ D M + +V VN N+ +
Sbjct: 348 TSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMK-----KNGYVPNVNTYNLIFGMLG 402
Query: 163 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 222
A L E +S +T++ ++ + G +D + ++ ++ +++
Sbjct: 403 KKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRD 462
Query: 223 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 282
Y ++S+Y G ++ D+ S + ++ N LL S G A
Sbjct: 463 TYNTLISAYGRCGSRTYAFKMYDEMISSGFTPC-LTTYNALLNVLSRQGDWSTAQSIVSK 521
Query: 283 LLQKNCAPTNAS 294
+L+ P + S
Sbjct: 522 MLKNGFKPNDQS 533
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
+ ++L +YA KA E+F+ +KQS LS + + YN +M +Y + + +++++K
Sbjct: 604 FNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLK 663
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 162
V PD+ +YN I+ I + ++ L EM D G + V Y LV Y +
Sbjct: 664 SSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIAD-GMAPCVVTYHTLVGGYAS 718
Score = 40.4 bits (93), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 59/139 (42%), Gaps = 2/139 (1%)
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
E E+ F+ VK + +++N M+ +Y G K + + IK+ + PD+ TYN
Sbjct: 583 EGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSL 642
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
+ A + + +K L ++ S D V Y ++N + L+ L E
Sbjct: 643 MDMYAKSNESWEAEKILKQLK-SSQVKPDVVSYNTVINGFCKQG-LIKEAQRILSEMIAD 700
Query: 181 ITQRQWITYDFLIILYAGL 199
+TY L+ YA L
Sbjct: 701 GMAPCVVTYHTLVGGYASL 719
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/95 (18%), Positives = 52/95 (54%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY +L+ +YA + + +AE++ +++K S + + + YN ++ + G +++ ++ E+
Sbjct: 638 TYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEM 697
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
+ P + TY+ + A+ ++ ++ ++ M
Sbjct: 698 IADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYM 732
>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
Length = 457
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 97/245 (39%), Gaps = 2/245 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY+ LL Y A E++ EL + V L +ALMY ++M ++ + ++EE+
Sbjct: 84 TYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASLCKSARLGEALELLEEM 143
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
R P + T+N IS C N++ L M+ SG D V Y L++ A
Sbjct: 144 IRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMA-ASGVKADVVTYNTLMDGLCKAGR 202
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
L AE L + S + Y + G Q+ + +R + Y
Sbjct: 203 LQEAE-QLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYN 261
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 285
IL G + E+++Q S ++ + ++ +G T++A + +
Sbjct: 262 TILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMAR 321
Query: 286 KNCAP 290
C P
Sbjct: 322 AGCRP 326
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 109/257 (42%), Gaps = 13/257 (5%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L+ A ++AE+L ER+K S + + + Y+ + G+V V+E++
Sbjct: 189 TYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQM 248
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ + P++ TYN + + ID + +++M+ G + V Y +V+
Sbjct: 249 RDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGR 308
Query: 166 LVNAESSTLVEA-EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR---MTKQKMTS 221
E+ +++EA ++ + +TY L+ GL KI++ +++R M K +
Sbjct: 309 --TQEARSVMEAMARAGCRPDVVTYSSLV---NGLCKAGKIEEAVEAVREMAMEGCKPNA 363
Query: 222 RNYICILSSYLMLGHLKEVGEIIDQWKQSAT----SDFDISACNRLLGAFSDVGLTEKAN 277
Y ++ G L E ++++ +S N L+G G + A
Sbjct: 364 VTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDAL 423
Query: 278 EFHMLLLQKNCAPTNAS 294
+F + + C P S
Sbjct: 424 KFFQRMRSQGCDPDGVS 440
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 59/151 (39%), Gaps = 8/151 (5%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVK 71
Y+T +D + K+ E + + + TY++L++ A E+A E +
Sbjct: 296 YSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMA 355
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK-----NVVPDIFTYNLWISSCAA 126
NA+ Y ++ S G++ + +VEE+ + P + TYN I
Sbjct: 356 MEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCK 415
Query: 127 TLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 157
ID KF M G D V Y +V
Sbjct: 416 AGRIDDALKFFQRMR-SQGCDPDGVSYSTIV 445
>gi|296090624|emb|CBI41008.3| unnamed protein product [Vitis vinifera]
Length = 379
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 105/249 (42%), Gaps = 4/249 (1%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQ-SNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
Y + A AK EE+ E K+ ++S +++LY G + V +E+
Sbjct: 70 YEETVRRLASAKRFRWIEEILEEQKKYKDISREGFAVR-LISLYGKSGMFDHAFKVFDEM 128
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ + ++N + +C + D++ F E+ + G D V Y +VN +
Sbjct: 129 PDQKCERSVLSFNALLGACVHSKKFDKIDGFFQELPGNLGVVPDVVSYNIIVNAFCEMGS 188
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
L +A S L E EK + IT++ L+ + G+ ++IW ++ R+Y
Sbjct: 189 LDSA-LSVLDEMEKVGLEPDLITFNTLLNAFYQNGSYADGEKIWDLMKKNNVAPNVRSYN 247
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 285
L + + E E+ID+ K S D+ N L+ F + G E+A ++ + +
Sbjct: 248 AKLRGVISENRMSEAVELIDEMKTSGIKP-DVFTLNSLMKGFCNAGNLEEAKRWYSEIAR 306
Query: 286 KNCAPTNAS 294
P A+
Sbjct: 307 NELPPVRAT 315
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/96 (20%), Positives = 51/96 (53%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+ LL+ + E++++ +K++N++ N YN + +S ++ + +++E+
Sbjct: 210 TFNTLLNAFYQNGSYADGEKIWDLMKKNNVAPNVRSYNAKLRGVISENRMSEAVELIDEM 269
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 141
K + PD+FT N + N+++ K++ E++
Sbjct: 270 KTSGIKPDVFTLNSLMKGFCNAGNLEEAKRWYSEIA 305
>gi|297743427|emb|CBI36294.3| unnamed protein product [Vitis vinifera]
Length = 517
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 83/191 (43%), Gaps = 9/191 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
Y +LL ++A +LF + + L+ +A Y+ + Y V + V++ +
Sbjct: 229 AYNSLLEALCKGGNVDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQVLDRM 288
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+R N+VP++FTYN + + +D+ + LDEM + G S D Y N + +
Sbjct: 289 RRYNLVPNVFTYNCIVKKLCKSEKVDEAYQLLDEM-IERGVSPDLWSY-NAIQAFHCDHC 346
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
VN + EK TY+ ++ + +G D++ +W M R +
Sbjct: 347 EVNKALRLISRMEKENCMPDRHTYNMVLKMLLRVGRFDRVTDVWGG-------MEERGFY 399
Query: 226 CILSSYLMLGH 236
S+Y ++ H
Sbjct: 400 PAASTYAVMVH 410
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 55/120 (45%), Gaps = 2/120 (1%)
Query: 50 LLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKN 109
LL++ K ++A+E F++V + NA Y+ +M + VG + + EE++ +
Sbjct: 164 LLYVLCKRKHVKQAQEFFDKVNVEVMP-NAKTYSILMRGWGDVGDSSEARKLFEEMRERG 222
Query: 110 VVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 169
D+ YN + + N+D+ K EM +G + D Y + Y + + +A
Sbjct: 223 CAVDVVAYNSLLEALCKGGNVDEAYKLFREMG-SNGLAPDACSYSIFIRAYCEVNDIHSA 281
>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 894
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 87/199 (43%), Gaps = 4/199 (2%)
Query: 7 FVLSDSDYATRIDLMTKVFGIHSGERYFEGLP-LSAKTSE-TYTALLHLYAGAKWTEKAE 64
FV + ID + K+ + + FE L A+ +E YTAL+ Y A+ A
Sbjct: 466 FVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAH 525
Query: 65 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 124
LF+R+ N++ +N ++ G+VE +V+ + + + P + TY + I
Sbjct: 526 LLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEI 585
Query: 125 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR 184
+ D+ FLD+M SG + V Y + Y L+ AE + E+ I
Sbjct: 586 LRESDFDRANMFLDQMI-SSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLD 644
Query: 185 QWITYDFLIILYAGLGNKD 203
+I YD L+ Y +G D
Sbjct: 645 SFI-YDVLVNAYGCIGQLD 662
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 49/279 (17%), Positives = 113/279 (40%), Gaps = 5/279 (1%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVK 71
+ T ++ K+ + + YF GL + TYT+L+ Y A ++FE +
Sbjct: 193 FNTMVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMP 252
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
Q N + Y ++ + VG++++ + ++K PD+ TY + +++
Sbjct: 253 QEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKET 312
Query: 132 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 191
+ KF +EM ++G + Y L++ + + EK + + ++
Sbjct: 313 EALKFFEEMV-ENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVS-SVVPFNA 370
Query: 192 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 251
LI Y G + + S+++ K SR Y ++ + + ++++ ++
Sbjct: 371 LIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENK 430
Query: 252 TSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
S ++ N L+ + + A H L+++ P
Sbjct: 431 LSP-NLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVP 468
>gi|115462947|ref|NP_001055073.1| Os05g0275000 [Oryza sativa Japonica Group]
gi|50878350|gb|AAT85125.1| unknown protein, contains pentatricopeptide (PPR) repeat, PF01535
[Oryza sativa Japonica Group]
gi|113578624|dbj|BAF16987.1| Os05g0275000 [Oryza sativa Japonica Group]
gi|215695094|dbj|BAG90285.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 793
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 99/215 (46%), Gaps = 3/215 (1%)
Query: 38 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV-E 96
P S YT +LH + A E+A +LF +++ + + YN ++ +Y +G+
Sbjct: 174 PGSRLDVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWP 233
Query: 97 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 156
++ ++EE++ V PD FT + I++C +DQ F +++ G V Y L
Sbjct: 234 RIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKA-RGHVPCVVTYNAL 292
Query: 157 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 216
+ ++ A + A L E E S Q +TY+ L YA G ++ + ++
Sbjct: 293 LQVFGKAGNYTEA-LRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKG 351
Query: 217 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 251
+ Y ++++Y +G + E + D+ K++
Sbjct: 352 LLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNG 386
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 106/252 (42%), Gaps = 9/252 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY ALL ++ A +A + + ++ S +A+ YNE+ Y G E+ A ++ +
Sbjct: 288 TYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTM 347
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI---YIT 162
K ++P+ FTYN +++ A +D+ D M + +V VN N+ +
Sbjct: 348 TSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMK-----KNGYVPNVNTYNLIFGMLG 402
Query: 163 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 222
A L E +S +T++ ++ + G +D + ++ ++ +++
Sbjct: 403 KKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRD 462
Query: 223 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 282
Y ++S+Y G ++ D+ S + ++ N LL S G A
Sbjct: 463 TYNTLISAYGRCGSRTYAFKMYDEMISSGFTPC-LTTYNALLNVLSRQGDWSTAQSIVSK 521
Query: 283 LLQKNCAPTNAS 294
+L+ P + S
Sbjct: 522 MLKNGFKPNDQS 533
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
+ ++L +YA KA E+F+ +KQS LS + + YN +M +Y + + +++++K
Sbjct: 604 FNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLK 663
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 162
V PD+ +YN I+ I + ++ L EM D G + V Y LV Y +
Sbjct: 664 SSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIAD-GMAPCVVTYHTLVGGYAS 718
Score = 40.4 bits (93), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 59/139 (42%), Gaps = 2/139 (1%)
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
E E+ F+ VK + +++N M+ +Y G K + + IK+ + PD+ TYN
Sbjct: 583 EGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSL 642
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
+ A + + +K L ++ S D V Y ++N + L+ L E
Sbjct: 643 MDMYAKSNESWEAEKILKQLK-SSQVKPDVVSYNTVINGFCKQG-LIKEAQRILSEMIAD 700
Query: 181 ITQRQWITYDFLIILYAGL 199
+TY L+ YA L
Sbjct: 701 GMAPCVVTYHTLVGGYASL 719
Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/95 (18%), Positives = 52/95 (54%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY +L+ +YA + + +AE++ +++K S + + + YN ++ + G +++ ++ E+
Sbjct: 638 TYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEM 697
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
+ P + TY+ + A+ ++ ++ ++ M
Sbjct: 698 IADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYM 732
>gi|297790207|ref|XP_002863007.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297308804|gb|EFH39266.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 842
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 133/300 (44%), Gaps = 44/300 (14%)
Query: 19 DLMTKVFGI-HSGER---YFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQ 72
++M K +GI S E+ FE + T + TY L+ + A A +KA+ E++++
Sbjct: 509 NVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPDKAKCYLEKMRE 568
Query: 73 SNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQ 132
+ + + Y +++ ++ +GQ+ V +E+ N+ PD+ Y + I++ A T N+ Q
Sbjct: 569 TGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQ 628
Query: 133 VKKFLDEMSCDSGGSDDWVKYVNLVNIY---------------------------ITASH 165
+++ M ++G + V Y +L+ +Y + SH
Sbjct: 629 AMSYVEAMK-EAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLRSCNETQYPDVYTSH 687
Query: 166 LVN---AESSTLVEAE---KSITQRQ---WITYDFLIILYAGLGNKDKIDQIWKSLRMTK 216
+N +E S + +AE +S+ QR+ T+ ++ +Y G ++ QI K +R +
Sbjct: 688 CMNNLCSERSMVRKAEAIFESMKQRREANEFTFAMMLCMYKKNGRFEEATQIAKQMREMR 747
Query: 217 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
+Y +L Y + G KE E + S D S L +G+++KA
Sbjct: 748 ILTDPLSYNSVLGLYALDGRFKEAVETFKEMVSSGIQP-DDSTFKSLGTILIKLGMSKKA 806
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 89/203 (43%), Gaps = 8/203 (3%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 102
+S TY ++ Y + ++A E F+R+ + + + +N M+ +Y + GQ +V ++
Sbjct: 297 SSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHVYGNNGQFGEVTSLM 356
Query: 103 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 162
+ +K + PD TYN+ IS +I++ + EM +G D V Y L+ + +
Sbjct: 357 KTMKF-HCAPDTRTYNILISLHTKNNDIERAGTYFKEMK-GAGLKPDPVSYRTLLYAF-S 413
Query: 163 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK--QKMT 220
+V + E + + + T L +Y + +++ W R M+
Sbjct: 414 IRRMVKEAEELIAEMDDNDVEIDEYTQSALTRMYI---EAEMLEKSWSWFRRVHVAGNMS 470
Query: 221 SRNYICILSSYLMLGHLKEVGEI 243
S Y + +Y G+L E +
Sbjct: 471 SEGYSANIDAYGERGYLSEAERV 493
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 56/119 (47%), Gaps = 8/119 (6%)
Query: 11 DSDYATRIDLMTKV-FGIHSGERYFEGLPLSAKTSETYTAL-LHLYAGAKWTEKAEELF- 67
+S Y T ID+ +K +H+ + + + E T + L +Y A+ +KAEE F
Sbjct: 222 NSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFK 281
Query: 68 -----ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 121
E S++ ++ YN M+ Y GQ+++ + + + + +VP T+N I
Sbjct: 282 KWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMI 340
>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
Length = 996
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 4/165 (2%)
Query: 50 LLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKN 109
L GA EKA + + + Y++++ L + +V+ L+ EE+K +
Sbjct: 451 LARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNH 510
Query: 110 VVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 169
VVPD+FTY + I S + Q +K+ DEM D G + + V Y L++ Y+ A + +A
Sbjct: 511 VVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRD-GCAPNVVTYTALIHAYLKARKMSSA 569
Query: 170 -ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 213
E ++ +E I +TY LI + G +K QI+ +R
Sbjct: 570 NELFEMMLSEGCIP--NVVTYTALIDGHCKSGQIEKACQIYARMR 612
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 112/300 (37%), Gaps = 31/300 (10%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPL--SAKTSETYTALLHLYAGAKWTEKAEELFERVK 71
Y ID KV + ++F+ + A TYTAL+H Y A+ A ELFE +
Sbjct: 518 YTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMML 577
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPD----------------IF 115
N + Y ++ + GQ+EK + ++ +PD IF
Sbjct: 578 SEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIF 637
Query: 116 TYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLV 175
TY + + + + LD MS + G + + Y L++ + L A+
Sbjct: 638 TYGALVDGLCKAHKVKEARDLLDVMSVE-GCEPNHIVYDALIDGFCKVGKLDEAQMVFTK 696
Query: 176 EAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLG 235
+E+ + TY LI L ++D K L + + N I M+
Sbjct: 697 MSERGYGPNVY-TYSSLI---DRLFKDKRLDLALKVLSRMLENSCAPNVIIYTE---MID 749
Query: 236 HLKEVGEIIDQWK-----QSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
L +VG+ + ++ + ++ ++ F G +K E + K CAP
Sbjct: 750 GLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAP 809
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 53/124 (42%), Gaps = 7/124 (5%)
Query: 17 RIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLS 76
R+DL KV R E A YT ++ T++A L +++
Sbjct: 721 RLDLALKVL-----SRMLENS--CAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCH 773
Query: 77 FNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKF 136
N + Y M+ + G+V+K ++ ++ K P+ TY + I+ C A +D +
Sbjct: 774 PNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQL 833
Query: 137 LDEM 140
LDEM
Sbjct: 834 LDEM 837
>gi|218197339|gb|EEC79766.1| hypothetical protein OsI_21159 [Oryza sativa Indica Group]
Length = 410
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 114/268 (42%), Gaps = 5/268 (1%)
Query: 27 IHSGERYFEGLPLS--AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNE 84
+ R F+ +PL A TYTAL+H Y EK LFE +++ + N YN
Sbjct: 54 VAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNC 113
Query: 85 MMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS 144
++ + G+ E+ + +E+ + +V ++ +YN I+ + K LD M +
Sbjct: 114 LIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTE- 172
Query: 145 GGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDK 204
G + + LV+ Y A + NA + + + Q +TY+ LI + + +
Sbjct: 173 GTRPSIITFNLLVDGYGKAGKMSNA-LPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTR 231
Query: 205 IDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLL 264
++ ++ + T Y ++ S+ H+ + EI+ +++ + D L+
Sbjct: 232 ANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGL-EVDAHTYGVLV 290
Query: 265 GAFSDVGLTEKANEFHMLLLQKNCAPTN 292
A G + A + + +K P+N
Sbjct: 291 RALCMEGNMKDARKLFQSMGEKGVEPSN 318
>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
Length = 1010
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 4/165 (2%)
Query: 50 LLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKN 109
L GA EKA + + + Y++++ L + +V+ L+ EE+K +
Sbjct: 451 LARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNH 510
Query: 110 VVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 169
VVPD+FTY + I S + Q +K+ DEM D G + + V Y L++ Y+ A + +A
Sbjct: 511 VVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRD-GCAPNVVTYTALIHAYLKARKMSSA 569
Query: 170 -ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 213
E ++ +E I +TY LI + G +K QI+ +R
Sbjct: 570 NELFEMMLSEGCIP--NVVTYTALIDGHCKSGQIEKACQIYARMR 612
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 112/300 (37%), Gaps = 31/300 (10%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPL--SAKTSETYTALLHLYAGAKWTEKAEELFERVK 71
Y ID KV + ++F+ + A TYTAL+H Y A+ A ELFE +
Sbjct: 518 YTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMML 577
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPD----------------IF 115
N + Y ++ + GQ+EK + ++ +PD IF
Sbjct: 578 SEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIF 637
Query: 116 TYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLV 175
TY + + + + LD MS + G + + Y L++ + L A+
Sbjct: 638 TYGALVDGLCKAHKVKEARDLLDVMSVE-GCEPNHIVYDALIDGFCKVGKLDEAQMVFTK 696
Query: 176 EAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLG 235
+E+ + TY LI L ++D K L + + N I M+
Sbjct: 697 MSERGYGPNVY-TYSSLI---DRLFKDKRLDLALKVLSRMLENSCAPNVIIYTE---MID 749
Query: 236 HLKEVGEIIDQWK-----QSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
L +VG+ + ++ + ++ ++ F G +K E + K CAP
Sbjct: 750 GLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAP 809
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 44/94 (46%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
YT ++ T++A L +++ N + Y M+ + G+V+K ++ ++
Sbjct: 744 YTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMG 803
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
K P+ TY + I+ C A +D + LDEM
Sbjct: 804 AKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEM 837
>gi|297844992|ref|XP_002890377.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336219|gb|EFH66636.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 537
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 113/265 (42%), Gaps = 10/265 (3%)
Query: 27 IHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTE--KAEELFERVKQSNLSFNALMYNE 84
I E+ F+ + L+ YT + + A + + +A ++F + S + NA+ +N
Sbjct: 271 ISEAEKVFKDMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNN 330
Query: 85 MMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM---S 141
+M +++ G+ EKV V ++K+ PD TYN I + N++ K L+ M
Sbjct: 331 LMRVHVKAGRPEKVLQVYNQMKKLGCEPDTITYNFLIETHCRDENLENAVKVLNTMIKKK 390
Query: 142 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 201
C+ S N + YI VN + ++ + +TY+ L+ ++AG +
Sbjct: 391 CEVNAST-----FNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFAGSKS 445
Query: 202 KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 261
D + ++ K + + + Y +++ + +GH ++ + + +S
Sbjct: 446 TDMVLKMKKDMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYE 505
Query: 262 RLLGAFSDVGLTEKANEFHMLLLQK 286
+L G +K E ++QK
Sbjct: 506 MVLAQLRRAGQLKKHEELVEKMIQK 530
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/138 (20%), Positives = 66/138 (47%), Gaps = 7/138 (5%)
Query: 58 KWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTY 117
+ +A+ F+ +K + ++Y ++ + G++ + V +++K + P+++TY
Sbjct: 235 RRASEAQSFFDSLKD-RFEPDVIVYTNLVRGWCRAGEISEAEKVFKDMKLAGIEPNVYTY 293
Query: 118 NLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLV-- 175
++ I + I + +M DSG + + + + NL+ +++ A E V
Sbjct: 294 SIVIDALCRCGQISRAHDVFADM-LDSGCAPNAITFNNLMRVHVKAGR---PEKVLQVYN 349
Query: 176 EAEKSITQRQWITYDFLI 193
+ +K + ITY+FLI
Sbjct: 350 QMKKLGCEPDTITYNFLI 367
>gi|302776756|ref|XP_002971525.1| hypothetical protein SELMODRAFT_95815 [Selaginella moellendorffii]
gi|300160657|gb|EFJ27274.1| hypothetical protein SELMODRAFT_95815 [Selaginella moellendorffii]
Length = 356
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 102/232 (43%), Gaps = 5/232 (2%)
Query: 64 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 123
+ LF +K ++ YN ++ + G ++KV V+ E+ R+ + PD+F++N I++
Sbjct: 83 DRLFLEIKSRGVALTLRSYNVVICAFTKEGSIDKVEEVIREMIRQELRPDLFSFNALIAA 142
Query: 124 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQ 183
A + ++ + M +G D V Y L+ ++ + S + E + Q
Sbjct: 143 YAMSRKPERGLQVFSNMKA-AGVLPDIVTYTTLIQMF-SRSAMHKEAIEMFEEMVVNKCQ 200
Query: 184 RQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI 243
+ Y L+ +Y G I+ L++ + Y ++S++L G L+E +
Sbjct: 201 PDFFVYSLLVSVYGKAGLVADALLIFHRLQLEGHRPNIVTYTSLISAHLHKGLLEESRKH 260
Query: 244 IDQWKQSATSDFDISACNRLLGAFSDVGLT-EKANEFHMLLLQKNCAPTNAS 294
Q + D+ N ++ A++ G+ + AN H L Q C P AS
Sbjct: 261 FSQMEAYGCRA-DVHLLNTMIDAYAKAGMVNDAANLLHRLTAQGVC-PNRAS 310
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 58/118 (49%), Gaps = 5/118 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT L+ +++ + ++A E+FE + + + +Y+ ++++Y G V L+ +
Sbjct: 170 TYTTLIQMFSRSAMHKEAIEMFEEMVVNKCQPDFFVYSLLVSVYGKAGLVADALLIFHRL 229
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
+ + P+I TY IS+ +++ +K +M +D V+L+N I A
Sbjct: 230 QLEGHRPNIVTYTSLISAHLHKGLLEESRKHFSQMEAYGCRAD-----VHLLNTMIDA 282
>gi|414591641|tpg|DAA42212.1| TPA: hypothetical protein ZEAMMB73_141452 [Zea mays]
Length = 472
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 100/230 (43%), Gaps = 3/230 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY +++H A+ +KAE ++ + N YN ++ Y S GQ ++ V +E+
Sbjct: 222 TYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM 281
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+R +++PD+ T ++ + S I + + D M+ G + D Y ++N Y T
Sbjct: 282 RRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAM-KGQNPDVFSYNIMLNGYATKGC 340
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
LV+ + I + T++ I YA G DK I+ +R K Y
Sbjct: 341 LVDMTDLFDLMLGDGIAP-DFYTFNVQIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYR 399
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEK 275
++++ +G + + E +Q + D A N L+ F G+ K
Sbjct: 400 TVIAALCRIGKMDDAMEKFNQMIDQGVAP-DKYAYNCLIQGFCTHGILLK 448
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 56/293 (19%), Positives = 107/293 (36%), Gaps = 39/293 (13%)
Query: 35 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 94
+G + + TS TY L+ A E A F ++ ++ L +A++ + ++ + +
Sbjct: 68 QGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKR 127
Query: 95 V-EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM------------- 140
E + +++ VPD+F+YN+ + S Q L M
Sbjct: 128 TDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADNLLRMMAEGGTVCSPDVVA 187
Query: 141 ----------------SCD-------SGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA 177
+CD G D V Y ++V+ A + AE+
Sbjct: 188 YNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMV 247
Query: 178 EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHL 237
K + W TY+ LI Y+ G + +++K +R ++ S G +
Sbjct: 248 NKRVLPNNW-TYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKI 306
Query: 238 KEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
KE ++ D + D+ + N +L ++ G + L+L AP
Sbjct: 307 KEARDVFDTMAMKGQNP-DVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAP 358
Score = 43.9 bits (102), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 45/233 (19%), Positives = 95/233 (40%), Gaps = 5/233 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSN--LSFNALMYNEMMTLYMSVGQVEKVALVVE 103
+Y LL + +A+ L + + S + + YN ++ + G V K + +
Sbjct: 150 SYNILLKSLCNQGKSGQADNLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFK 209
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
E+ ++ + PD+ TYN + + +D+ + FL +M ++W Y NL+ Y +
Sbjct: 210 EMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWT-YNNLIYGYSST 268
Query: 164 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 223
A E + +T L+ G + ++ ++ M Q +
Sbjct: 269 GQWKEA-VRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFS 327
Query: 224 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
Y +L+ Y G L ++ ++ D + D N + A+++ G+ +KA
Sbjct: 328 YNIMLNGYATKGCLVDMTDLFDLMLGDGIAP-DFYTFNVQIKAYANCGMLDKA 379
>gi|356556194|ref|XP_003546411.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Glycine max]
Length = 829
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 125/284 (44%), Gaps = 10/284 (3%)
Query: 18 IDLMTKVFGIHS----GERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVK 71
++LM ++ G S + F+ +P+ + + YT +LH YA ++A +LF ++K
Sbjct: 183 VELMVRILGRESQHSIASKLFDLIPVEKYSLDVRAYTTILHSYARTGKYKRAIDLFGKMK 242
Query: 72 QSNLSFNALMYNEMMTLYMSVGQV-EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 130
+ L + YN M+ +Y +G+ +++ +++E++ K + D FT + IS+C +
Sbjct: 243 EIGLDPTLVTYNVMLDVYGKMGRSWDRILELLDEMRSKGLELDEFTCSTVISACGREGML 302
Query: 131 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 190
D+ +KFL E+ + G V Y +++ ++ A A S L E E + +TY+
Sbjct: 303 DEARKFLAELKFN-GYKPGTVTYNSMLQVFGKAGIYTEA-LSILKEMEDNNCPPDSVTYN 360
Query: 191 FLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQS 250
L Y G D+ + ++ + Y ++ +Y G + + K
Sbjct: 361 ELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSLMKDL 420
Query: 251 ATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
+ ++ N +L TE + + CAP A+
Sbjct: 421 GCAP-NVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRAT 463
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 84/198 (42%), Gaps = 2/198 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT ++ Y A + A LF +K + N YN ++ + + E V V+ E+
Sbjct: 393 TYTTVIDAYGKAGREDDALRLFSLMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEM 452
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K P+ T+N ++ C+ + V K L EM + G D + L++ Y
Sbjct: 453 KLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMK-NCGFEPDKDTFNTLISAYARCGS 511
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
V++ + E KS TY+ L+ A G+ + + + +R K +Y
Sbjct: 512 EVDS-AKMYGEMVKSGFTPCVTTYNALLNALARRGDWKAAESVIQDMRTKGFKPNENSYS 570
Query: 226 CILSSYLMLGHLKEVGEI 243
+L Y G++K + ++
Sbjct: 571 LLLHCYSKAGNVKGIEKV 588
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 3/100 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L+ LY KAEE+ + ++ S + + YN ++ + G +++ V+ E+
Sbjct: 673 TYNCLMDLYVREGECWKAEEVLKGIQNSGPEPDVVSYNTVIKGFCRKGLMQEAIGVLSEM 732
Query: 106 KRKNVVPDIFTYNLWISSCAATLNID---QVKKFLDEMSC 142
K + P I TYN ++S A D +V +F+ E +C
Sbjct: 733 TTKGIQPTIVTYNTFLSGYAGMELFDEANEVIRFMIEHNC 772
Score = 44.3 bits (103), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 46/246 (18%), Positives = 102/246 (41%), Gaps = 3/246 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY ALL+ A + AE + + ++ N Y+ ++ Y G V+ + V +EI
Sbjct: 533 TYNALLNALARRGDWKAAESVIQDMRTKGFKPNENSYSLLLHCYSKAGNVKGIEKVEKEI 592
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+V P + + ++ +++ D++ G D V ++++++
Sbjct: 593 YDGHVFPSWILLRTLVLTNHKCRHLRGMERAFDQLQ-KYGYKPDLVVINSMLSMFARNKM 651
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
A E + Q TY+ L+ LY G K +++ K ++ + + +Y
Sbjct: 652 FSKAREMLHFIHECGL-QPNLFTYNCLMDLYVREGECWKAEEVLKGIQNSGPEPDVVSYN 710
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 285
++ + G ++E ++ + I N L ++ + L ++ANE +++
Sbjct: 711 TVIKGFCRKGLMQEAIGVLSEMTTKGIQP-TIVTYNTFLSGYAGMELFDEANEVIRFMIE 769
Query: 286 KNCAPT 291
NC P+
Sbjct: 770 HNCRPS 775
Score = 43.9 bits (102), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 82/215 (38%), Gaps = 38/215 (17%)
Query: 49 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 108
++L ++A K KA E+ + + L N YN +M LY+ G+ K V++ I+
Sbjct: 641 SMLSMFARNKMFSKAREMLHFIHECGLQPNLFTYNCLMDLYVREGECWKAEEVLKGIQNS 700
Query: 109 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVN 168
PD+ +YN I K F C G L+
Sbjct: 701 GPEPDVVSYNTVI------------KGF-----CRKG--------------------LMQ 723
Query: 169 AESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICIL 228
L E Q +TY+ + YAG+ D+ +++ + + + + Y ++
Sbjct: 724 EAIGVLSEMTTKGIQPTIVTYNTFLSGYAGMELFDEANEVIRFMIEHNCRPSELTYKILV 783
Query: 229 SSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRL 263
Y G +E + + + K+ S FD + RL
Sbjct: 784 DGYCKAGKYEEAMDFVSKIKELDIS-FDDQSVKRL 817
>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 97/205 (47%), Gaps = 6/205 (2%)
Query: 16 TRIDLMTKVFGIHSGERYF---EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQ 72
T +D M K I+ +F +G L + TYTAL+ + EKA ELF+ + +
Sbjct: 456 TLVDGMCKHGRINGAVEFFNEMQGKGLKG-NAVTYTALIRAFCNVNNIEKAMELFDEMLE 514
Query: 73 SNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQ 132
+ S +A++Y +++ G++++ + V+ ++K PDI ++N+ I+ +D+
Sbjct: 515 AGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDE 574
Query: 133 VKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFL 192
+ L EM ++G D V Y L++ + A ++ + +TY L
Sbjct: 575 AYEMLKEME-NAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVP-TVVTYGAL 632
Query: 193 IILYAGLGNKDKIDQIWKSLRMTKQ 217
I Y GN D+ +I++ + T +
Sbjct: 633 IHAYCLNGNLDEAMKIFRDMSSTSK 657
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 90/203 (44%), Gaps = 8/203 (3%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGL---PLSAKTSETYTALLHLYAGAKWTEKAEELFERV 70
Y T ID + KV G E + P + TY L+ Y A E A ELF+++
Sbjct: 383 YNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQM 442
Query: 71 KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 130
+ + N + N ++ G++ E++ K + + TY I + NI
Sbjct: 443 NKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNI 502
Query: 131 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 190
++ + DEM ++G S D + Y L++ A L A S L + +++ ++++
Sbjct: 503 EKAMELFDEM-LEAGCSPDAIVYYTLISGLSQAGKLDRA-SFVLSKMKEAGFSPDIVSFN 560
Query: 191 FLIILYAGLGNKDKIDQIWKSLR 213
LI G K+K+D+ ++ L+
Sbjct: 561 VLI---NGFCRKNKLDEAYEMLK 580
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/113 (18%), Positives = 55/113 (48%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
++ L++ + ++A E+ + ++ + + + + YN +++ + G +++++
Sbjct: 558 SFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKM 617
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 158
++ +VP + TY I + N+D+ K +MS S + V Y L+N
Sbjct: 618 VKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILIN 670
>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Vitis vinifera]
Length = 1045
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 4/165 (2%)
Query: 50 LLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKN 109
L GA EKA + + + Y++++ L + +V+ L+ EE+K +
Sbjct: 451 LARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNH 510
Query: 110 VVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 169
VVPD+FTY + I S + Q +K+ DEM D G + + V Y L++ Y+ A + +A
Sbjct: 511 VVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRD-GCAPNVVTYTALIHAYLKARKMSSA 569
Query: 170 -ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 213
E ++ +E I +TY LI + G +K QI+ +R
Sbjct: 570 NELFEMMLSEGCIP--NVVTYTALIDGHCKSGQIEKACQIYARMR 612
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 112/300 (37%), Gaps = 31/300 (10%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPL--SAKTSETYTALLHLYAGAKWTEKAEELFERVK 71
Y ID KV + ++F+ + A TYTAL+H Y A+ A ELFE +
Sbjct: 518 YTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMML 577
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPD----------------IF 115
N + Y ++ + GQ+EK + ++ +PD IF
Sbjct: 578 SEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIF 637
Query: 116 TYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLV 175
TY + + + + LD MS + G + + Y L++ + L A+
Sbjct: 638 TYGALVDGLCKAHKVKEARDLLDVMSVE-GCEPNHIVYDALIDGFCKVGKLDEAQMVFTK 696
Query: 176 EAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLG 235
+E+ + TY LI L ++D K L + + N I M+
Sbjct: 697 MSERGYGPNVY-TYSSLI---DRLFKDKRLDLALKVLSRMLENSCAPNVIIYTE---MID 749
Query: 236 HLKEVGEIIDQWK-----QSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
L +VG+ + ++ + ++ ++ F G +K E + K CAP
Sbjct: 750 GLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAP 809
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 44/94 (46%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
YT ++ T++A L +++ N + Y M+ + G+V+K ++ ++
Sbjct: 744 YTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMG 803
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
K P+ TY + I+ C A +D + LDEM
Sbjct: 804 AKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEM 837
>gi|168047776|ref|XP_001776345.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672305|gb|EDQ58844.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 503
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 107/242 (44%), Gaps = 20/242 (8%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL---VVE 103
Y L+ Y E+AE L +++ + N YN ++T Y+ + + ++E
Sbjct: 212 YNILIDAYGRVGQLEEAEGLMTEMRERGIQPNVGTYNALITGYLEAKPKRQFVVAEGLIE 271
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
E++ + PD+ T+ + + + +Q ++ + M G + Y L+N Y
Sbjct: 272 EMEASGLYPDVVTFTMLLGAYGHEGLTEQAEQVFNRMKA-RGVQPNSYSYTALINAY--- 327
Query: 164 SHLVNAESSTLVEAEKS--ITQRQWI-----TYDFLIILYAGLGNKDKIDQIWKSLRMTK 216
AE +A ++ + ++Q + TY L+ Y G+ + + +WKS+++
Sbjct: 328 -----AERRCPEKAARAFEMIRKQGVNPTVETYTALLDAYRRAGDLEMVQAVWKSMKVEG 382
Query: 217 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
T Y+ IL ++ G KE ++I+++K D+ N LL ++ G KA
Sbjct: 383 CVATRVTYMTILDAFQKQGRYKEARDLIEEFKNQGHKP-DLMVYNMLLNSYMRGGRHVKA 441
Query: 277 NE 278
++
Sbjct: 442 SD 443
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 79/188 (42%), Gaps = 4/188 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+T LL Y TE+AE++F R+K + N+ Y ++ Y EK A E I
Sbjct: 284 TFTMLLGAYGHEGLTEQAEQVFNRMKARGVQPNSYSYTALINAYAERRCPEKAARAFEMI 343
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+++ V P + TY + + +++ V+ M + G V Y+ +++ +
Sbjct: 344 RKQGVNPTVETYTALLDAYRRAGDLEMVQAVWKSMKVE-GCVATRVTYMTILDAFQKQGR 402
Query: 166 LVNAESSTLVEAEKSITQRQ-WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
E+ L+E K+ + + Y+ L+ Y G K I ++ S Y
Sbjct: 403 Y--KEARDLIEEFKNQGHKPDLMVYNMLLNSYMRGGRHVKASDILLEMKTAGFLPDSFTY 460
Query: 225 ICILSSYL 232
++ +L
Sbjct: 461 CTLIYGFL 468
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 78/176 (44%), Gaps = 8/176 (4%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
S +YTAL++ YA + EKA FE +++ ++ Y ++ Y G +E V V +
Sbjct: 317 SYSYTALINAYAERRCPEKAARAFEMIRKQGVNPTVETYTALLDAYRRAGDLEMVQAVWK 376
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
+K + V TY + + + + ++E + G D + Y L+N Y+
Sbjct: 377 SMKVEGCVATRVTYMTILDAFQKQGRYKEARDLIEEFK-NQGHKPDLMVYNMLLNSYMRG 435
Query: 164 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 219
V A S L+E + + TY LI Y L +D+ K+L+ ++ M
Sbjct: 436 GRHVKA-SDILLEMKTAGFLPDSFTYCTLI--YGFLRVRDQT----KALKYHREMM 484
Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 41/82 (50%)
Query: 42 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 101
T ETYTALL Y A E + +++ +K + Y ++ + G+ ++ +
Sbjct: 350 PTVETYTALLDAYRRAGDLEMVQAVWKSMKVEGCVATRVTYMTILDAFQKQGRYKEARDL 409
Query: 102 VEEIKRKNVVPDIFTYNLWISS 123
+EE K + PD+ YN+ ++S
Sbjct: 410 IEEFKNQGHKPDLMVYNMLLNS 431
Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 50/117 (42%), Gaps = 1/117 (0%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 102
T TY +L + ++A +L E K + ++YN ++ YM G+ K + ++
Sbjct: 386 TRVTYMTILDAFQKQGRYKEARDLIEEFKNQGHKPDLMVYNMLLNSYMRGGRHVKASDIL 445
Query: 103 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 159
E+K +PD FTY I + + K+ EM + G D Y L I
Sbjct: 446 LEMKTAGFLPDSFTYCTLIYGFLRVRDQTKALKYHREM-MNRGQLPDPKTYAKLRAI 501
>gi|414888269|tpg|DAA64283.1| TPA: hypothetical protein ZEAMMB73_921256 [Zea mays]
Length = 616
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 121/299 (40%), Gaps = 44/299 (14%)
Query: 34 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 93
F LP ++T+ +YT+L+ YA E+A L +++K + ++ A YN ++
Sbjct: 164 FHDLPAESRTALSYTSLIAAYARNALHEEARALLDQMKATGVAPTAATYNTVLAACARAT 223
Query: 94 ----QVEKVALVVEEIKR---KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGG 146
+ + + E++ +V PD+ TYN +++ A DQ + L M ++G
Sbjct: 224 DPPVPFDMLLGLFAEMRHDASPSVRPDLTTYNTLLAAAAVRSLADQSEMLLHTM-LEAGV 282
Query: 147 SDDWVKYVNLVNIYITASHLVNA-----------------------ESSTLVEAEKSITQ 183
S D V Y ++V+ + +A +L A E+ T V A
Sbjct: 283 SPDTVSYRHIVDAFASAGNLSRAAELFSEMAATGHTADASAYLGLMEAHTRVGATADAVA 342
Query: 184 --RQW---------ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYL 232
RQ TY L+ LY G D + Q+++ +R T+ Y + +
Sbjct: 343 VLRQMQADGCAPTAATYRVLLDLYGRQGRFDGVRQLFREMRTAVPPDTA-TYNVLFRVFG 401
Query: 233 MLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 291
G KEV E+ ++ D+ C ++ A GL A E + ++ PT
Sbjct: 402 DGGFFKEVVELFHDMLKTGVQP-DMVTCENVMAACGHGGLHGDAREVLEYMTREGMVPT 459
>gi|356530296|ref|XP_003533718.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Glycine max]
Length = 830
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 126/284 (44%), Gaps = 10/284 (3%)
Query: 18 IDLMTKVFGIHS----GERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVK 71
++LM ++ G S + F+ +P+ + + YT +LH YA + ++A +LF++++
Sbjct: 184 VELMVRILGRESQHSIASKLFDLIPVEKYSLDVRAYTTILHAYARSGKYKRAIDLFDKME 243
Query: 72 QSNLSFNALMYNEMMTLYMSVGQV-EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 130
L + YN M+ +Y +G+ ++ +++E++ K + D FT + IS+C +
Sbjct: 244 GIGLDPTLVTYNVMLDVYGKMGRSWGRILELLDEMRSKGLEFDEFTCSTVISACGREGML 303
Query: 131 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 190
D+ +KFL E+ + G V Y +++ ++ A A S L E E + ITY+
Sbjct: 304 DEARKFLAELKLN-GYKPGTVMYNSMLQVFGKAGIYTEA-LSILKEMEDNNCPPDSITYN 361
Query: 191 FLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQS 250
L Y G D+ + ++ + Y ++ +Y G + + + K
Sbjct: 362 ELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSKMKDL 421
Query: 251 ATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
+ ++ N +L TE + + CAP A+
Sbjct: 422 GCAP-NVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRAT 464
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 81/191 (42%), Gaps = 9/191 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT ++ Y A + A LF ++K + N YN ++ + + E V V+ E+
Sbjct: 394 TYTTVIDAYGKAGREDDALRLFSKMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEM 453
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K P+ T+N ++ C+ + V K L EM + G D + L++ Y
Sbjct: 454 KLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMK-NCGFEPDKDTFNTLISSYARCGS 512
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
V++ + E KS TY+ L+ A G+ WK+ Q M ++ +
Sbjct: 513 EVDS-AKMYGEMVKSGFTPCVTTYNALLNALAHRGD-------WKAAESVIQDMQTKGFK 564
Query: 226 CILSSYLMLGH 236
+SY +L H
Sbjct: 565 PNETSYSLLLH 575
Score = 44.7 bits (104), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 3/100 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L+ LY KAEE+ + ++ S + + YN ++ + G +++ V+ E+
Sbjct: 674 TYNCLMDLYVREDECWKAEEVLKGIQNSVPEPDVVSYNTVIKGFCRKGLMQEAIRVLSEM 733
Query: 106 KRKNVVPDIFTYNLWISSCAATLNID---QVKKFLDEMSC 142
K + P I TYN ++S A D +V +F+ E +C
Sbjct: 734 TTKGIQPTIVTYNTFLSGYAGMELFDEANEVIRFMIEHNC 773
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 45/246 (18%), Positives = 102/246 (41%), Gaps = 3/246 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY ALL+ A + AE + + ++ N Y+ ++ Y G V + V +EI
Sbjct: 534 TYNALLNALAHRGDWKAAESVIQDMQTKGFKPNETSYSLLLHCYSKAGNVRGIEKVEKEI 593
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
V P + S ++ +++ D++ G D V ++++++ + +
Sbjct: 594 YDGQVFPSWILLRTLVLSNHKCRHLRGMERAFDQLQ-KYGYKPDLVVINSMLSMF-SRNK 651
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ + L + Q TY+ L+ LY K +++ K ++ + + +Y
Sbjct: 652 MFSKAREMLHFIHECGLQPNLFTYNCLMDLYVREDECWKAEEVLKGIQNSVPEPDVVSYN 711
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 285
++ + G ++E ++ + I N L ++ + L ++ANE +++
Sbjct: 712 TVIKGFCRKGLMQEAIRVLSEMTTKGIQP-TIVTYNTFLSGYAGMELFDEANEVIRFMIE 770
Query: 286 KNCAPT 291
NC P+
Sbjct: 771 HNCRPS 776
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/225 (16%), Positives = 99/225 (44%), Gaps = 3/225 (1%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y ++L ++ A +A + + ++ +N +++ YNE+ Y+ G +++ V++ +
Sbjct: 325 YNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSITYNELAATYVRAGFLDEGMAVIDTMT 384
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
K V+P+ TY I + D + +M D G + + Y +++ + S
Sbjct: 385 SKGVMPNAITYTTVIDAYGKAGREDDALRLFSKMK-DLGCAPNVYTYNSVLAMLGKKSRT 443
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 226
+ L E + + T++ ++ + + G + ++++ + ++ + +
Sbjct: 444 EDV-IKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNT 502
Query: 227 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 271
++SSY G + ++ + +S + ++ N LL A + G
Sbjct: 503 LISSYARCGSEVDSAKMYGEMVKSGFTPC-VTTYNALLNALAHRG 546
>gi|255557937|ref|XP_002519997.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540761|gb|EEF42321.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1429
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 81/168 (48%), Gaps = 4/168 (2%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV-EKVAL- 100
T + Y A++ +YA K + + + +++ + + +N ++ + G + VA+
Sbjct: 209 TVQVYNAMMGVYARTGRFNKVQGMLDLMRERGCEPDLVSFNTLINARLKAGAMTPNVAIE 268
Query: 101 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
++ E++R + PDI TYN IS+C+ N+++ K D+M D W Y ++++Y
Sbjct: 269 LLNEVRRSGLRPDIITYNTLISACSRESNLEEAVKVFDDMEAHYCQPDLWT-YNAMISVY 327
Query: 161 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQI 208
AE E E +TY+ L+ +A GN DK+ +I
Sbjct: 328 GRCGFSGKAE-QLFKELESKGYFPDAVTYNSLLYAFAREGNVDKVKEI 374
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 84/187 (44%), Gaps = 2/187 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY A++ +Y ++ KAE+LF+ ++ +A+ YN ++ + G V+KV + E+
Sbjct: 319 TYNAMISVYGRCGFSGKAEQLFKELESKGYFPDAVTYNSLLYAFAREGNVDKVKEICNEM 378
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ + D TYN I + +M SG + D + Y L++ A+
Sbjct: 379 VQMGFIRDEMTYNTIIHMYGKQGQHGLALQLYRDMKL-SGRTPDAITYTVLIDSLGKANK 437
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+V A ++ + E + TY LI YA G + + ++ + +R + + Y
Sbjct: 438 MVEA-ANVMSEMLNIGVKPTLRTYSALICGYARAGQRLEAEETFDCMRRSGIRPDQLAYS 496
Query: 226 CILSSYL 232
+L +L
Sbjct: 497 VMLDVFL 503
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 51/98 (52%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 102
T TY+AL+ YA A +AEE F+ +++S + + L Y+ M+ +++ + K ++
Sbjct: 456 TLRTYSALICGYARAGQRLEAEETFDCMRRSGIRPDQLAYSVMLDVFLRFDEATKAMMLY 515
Query: 103 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
E+ R + PD Y + + ++ +++ + +M
Sbjct: 516 REMVRDGITPDPTVYGAMLRNLGRENKVEDIQRIIRDM 553
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 90/210 (42%), Gaps = 10/210 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L+ + E+A ++F+ ++ + YN M+++Y G K + +E+
Sbjct: 284 TYNTLISACSRESNLEEAVKVFDDMEAHYCQPDLWTYNAMISVYGRCGFSGKAEQLFKEL 343
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY-ITAS 164
+ K PD TYN + + A N+D+VK+ +EM G D + Y ++++Y
Sbjct: 344 ESKGYFPDAVTYNSLLYAFAREGNVDKVKEICNEM-VQMGFIRDEMTYNTIIHMYGKQGQ 402
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQ---IWKSLRMTKQKMTS 221
H + + + + S ITY LI LG +K+ + + + K T
Sbjct: 403 HGLALQ--LYRDMKLSGRTPDAITYTVLI---DSLGKANKMVEAANVMSEMLNIGVKPTL 457
Query: 222 RNYICILSSYLMLGHLKEVGEIIDQWKQSA 251
R Y ++ Y G E E D ++S
Sbjct: 458 RTYSALICGYARAGQRLEAEETFDCMRRSG 487
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 35/186 (18%), Positives = 84/186 (45%), Gaps = 2/186 (1%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
+ ++L LY G K ++++R+K+ L + YN ++ +Y + E+ ++ E++
Sbjct: 913 WNSMLRLYTGIDDFRKTVQIYQRIKEDGLQPDEDTYNTLIVMYCRDHRPEEGCSLMHEMR 972
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
R + P + TY I++ + ++ +E+ G D Y ++ IY + +
Sbjct: 973 RIGLEPKLDTYKSLIAAFGKQQLVVDAEELFEEL-LSKGSKLDRSFYHIMMKIYRNSGNH 1031
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 226
AE L + + + T L++ Y G + +++ +L+ +++ Y
Sbjct: 1032 SKAE-KLLSMMKDAGVEPTIATMHLLMVSYGSSGQPQEAEKVLTNLKEMGLSLSTLPYSS 1090
Query: 227 ILSSYL 232
++ +YL
Sbjct: 1091 VIDAYL 1096
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 49/252 (19%), Positives = 100/252 (39%), Gaps = 10/252 (3%)
Query: 7 FVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAE 64
F +S S +D +V I ++ ++G+ + T Y ++ L K E
Sbjct: 836 FQISKSSILLILDAFARVSNIAEAKKIYQGMKAAGYFPTMHLYRIMIGLLCKGKRVRDVE 895
Query: 65 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 124
+ ++++ + ++N M+ LY + K + + IK + PD TYN I
Sbjct: 896 AMVTEMEEAGFRPDLSIWNSMLRLYTGIDDFRKTVQIYQRIKEDGLQPDEDTYNTLIVMY 955
Query: 125 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVE---AEKSI 181
++ + EM G Y +L+ + +V+AE L E ++ S
Sbjct: 956 CRDHRPEEGCSLMHEMR-RIGLEPKLDTYKSLIAAFGKQQLVVDAEE--LFEELLSKGSK 1012
Query: 182 TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVG 241
R + Y ++ +Y GN K +++ ++ + T ++ SY G +E
Sbjct: 1013 LDRSF--YHIMMKIYRNSGNHSKAEKLLSMMKDAGVEPTIATMHLLMVSYGSSGQPQEAE 1070
Query: 242 EIIDQWKQSATS 253
+++ K+ S
Sbjct: 1071 KVLTNLKEMGLS 1082
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 55/117 (47%), Gaps = 1/117 (0%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
+TY +L+ + + AEELFE + + Y+ MM +Y + G K ++
Sbjct: 981 DTYKSLIAAFGKQQLVVDAEELFEELLSKGSKLDRSFYHIMMKIYRNSGNHSKAEKLLSM 1040
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 161
+K V P I T +L + S ++ + +K L + + G S + Y ++++ Y+
Sbjct: 1041 MKDAGVEPTIATMHLLMVSYGSSGQPQEAEKVLTNLK-EMGLSLSTLPYSSVIDAYL 1096
>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
Length = 716
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 8/203 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY +L++ Y A ++A LF +K++ L+ + L YN ++ Y +G +E+ +E+
Sbjct: 374 TYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEM 433
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ PD+ TY + ++ N+ V++F DEM G D Y N I+A
Sbjct: 434 VEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEM-LSKGLQPDCFAY----NTRISAEL 488
Query: 166 LVNAESSTLVEAEKSITQ---RQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 222
++ + S E I++ +TY+ + GN +W + +
Sbjct: 489 ILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCI 548
Query: 223 NYICILSSYLMLGHLKEVGEIID 245
Y C++ ++ G L+E +I D
Sbjct: 549 TYTCLIHAHCERGRLREARDIFD 571
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 101/219 (46%), Gaps = 17/219 (7%)
Query: 17 RIDLMTKVFGIHSGERYFEGLPLSAKTSE-TYTALLHLYAGAKWTEKAEELFERVKQSNL 75
R+D K+ R E P S+ TY +++ A EKA +L +R++ S
Sbjct: 246 RVDQAAKLL------REMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSKK 299
Query: 76 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKK 135
+ +A +N ++T Y + G VEK + E++ + +VP + TYN I + N++ +
Sbjct: 300 A-SAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARM 358
Query: 136 FLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIIL 195
EM G D + Y +L+N Y A +L A + +++ +TY+ L+
Sbjct: 359 KFVEMRA-MGLLPDLITYNSLINGYCKAGNLKEA-LWLFGDLKRAGLAPSVLTYNILLDG 416
Query: 196 YAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLML 234
Y LG+ ++ R KQ+M + +S+Y +L
Sbjct: 417 YCRLGDLEEA-------RRFKQEMVEQGCQPDVSTYTIL 448
Score = 44.7 bits (104), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 53/117 (45%), Gaps = 1/117 (0%)
Query: 42 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 101
T TY ++H + E A F ++ L + + YN ++ Y G +++ +
Sbjct: 335 PTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWL 394
Query: 102 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 158
++KR + P + TYN+ + ++++ ++F EM + G D Y L+N
Sbjct: 395 FGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEM-VEQGCQPDVSTYTILMN 450
Score = 44.3 bits (103), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 46/236 (19%), Positives = 99/236 (41%), Gaps = 7/236 (2%)
Query: 57 AKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK--NVVPDI 114
A+W + ++ + Q + + + YN ++ + G+V++ A ++ E++ + +P
Sbjct: 210 ARW-DDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREGRVDQAAKLLREMEARPGGCLPSD 268
Query: 115 FTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTL 174
TYN+ I+ A +++ + +D M S + L+ Y + A + L
Sbjct: 269 VTYNVVINGLARKGELEKAAQLVDRMRMSKKASA--FTFNPLITGYFARGSVEKAGALQL 326
Query: 175 VEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLML 234
E E +TY+ +I GN + + +R Y +++ Y
Sbjct: 327 -EMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKA 385
Query: 235 GHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
G+LKE + K++ + + N LL + +G E+A F ++++ C P
Sbjct: 386 GNLKEALWLFGDLKRAGLAP-SVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQP 440
>gi|115466680|ref|NP_001056939.1| Os06g0172000 [Oryza sativa Japonica Group]
gi|55773690|dbj|BAD72273.1| putative PPR2 [Oryza sativa Japonica Group]
gi|113594979|dbj|BAF18853.1| Os06g0172000 [Oryza sativa Japonica Group]
gi|215697063|dbj|BAG91057.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218197679|gb|EEC80106.1| hypothetical protein OsI_21852 [Oryza sativa Indica Group]
gi|222635046|gb|EEE65178.1| hypothetical protein OsJ_20289 [Oryza sativa Japonica Group]
Length = 511
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 111/247 (44%), Gaps = 8/247 (3%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y L+ + K E+A ELF+ + + N Y +++ Y G+ ++ ++E++K
Sbjct: 163 YVKLITMLGKCKQPERAHELFQAMVDEGCAPNLESYTALVSAYSRSGRFDRAFSLLEQMK 222
Query: 107 -RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
PD+ TY++ I SC + ++VK +++M+ +G + V Y L++ Y A
Sbjct: 223 ATPGCRPDVQTYSILIKSCLHAYDFERVKYLMEDMA-RAGIRPNVVTYNTLIDAYGKAGR 281
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
ES+ L ++ W T + + + G G + ++ ++ + + + Y
Sbjct: 282 FAEMESTLLEMLTENCKPDVW-TMNSTLRAFGGSGQIETMESCYEKFQASGISPNIKTYN 340
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL-- 283
+L SY +++G ++ ++ Q + I N ++ AF G E+ L+
Sbjct: 341 ILLDSYGKAKMYEKMGAVM-EYMQKYYYSWTIVTYNVVIDAFGRAGDLEQMEYIFRLMKS 399
Query: 284 --LQKNC 288
++ NC
Sbjct: 400 ERIKPNC 406
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 116/254 (45%), Gaps = 5/254 (1%)
Query: 38 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 97
P +TY+ L+ A E+ + L E + ++ + N + YN ++ Y G+ +
Sbjct: 225 PGCRPDVQTYSILIKSCLHAYDFERVKYLMEDMARAGIRPNVVTYNTLIDAYGKAGRFAE 284
Query: 98 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 157
+ + E+ +N PD++T N + + + I+ ++ ++ SG S + Y L+
Sbjct: 285 MESTLLEMLTENCKPDVWTMNSTLRAFGGSGQIETMESCYEKFQA-SGISPNIKTYNILL 343
Query: 158 NIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 217
+ Y A + + + +K +TY+ +I + G+ ++++ I++ ++ +
Sbjct: 344 DSYGKA-KMYEKMGAVMEYMQKYYYSWTIVTYNVVIDAFGRAGDLEQMEYIFRLMKSERI 402
Query: 218 KMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG-LTEKA 276
K ++ +Y G +K++ ++ + S + DI N L+ AF VG L E
Sbjct: 403 KPNCVTLCSLVRAYGRAGDVKKIKTVLRIVENSDIT-LDIVFFNCLVDAFGRVGCLAEMW 461
Query: 277 NEFHMLLLQKNCAP 290
+ ++ LQ+ C P
Sbjct: 462 DVLDIMKLQR-CKP 474
>gi|356495741|ref|XP_003516732.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Glycine max]
Length = 523
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 74/167 (44%), Gaps = 2/167 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
Y LL ++A+ +F + + +A Y+ + Y V+ V++++
Sbjct: 253 AYNNLLQALCKGGRVDEAKNIFHDMLSKRVEPDAFTYSIFIHSYCDADDVQSAFRVLDKM 312
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+R N++P++FTYN I ++++ + LDEM D W N + Y
Sbjct: 313 RRYNLLPNVFTYNCIIKQLCKNEHVEEAYQLLDEMISRGVKPDTWS--YNAIQAYHCDHC 370
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 212
VN + EK I TY+ ++ L +G DK+ ++W+++
Sbjct: 371 EVNRALRLMFRMEKDICLPDRHTYNMVLKLLIRIGRFDKVTEVWENM 417
>gi|356552149|ref|XP_003544432.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Glycine max]
Length = 481
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 112/241 (46%), Gaps = 6/241 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEE-LFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
TY +++ Y A E+ ++ L + ++ N + N + Y + GQ++K+ +E
Sbjct: 232 TYNSIIDGYGKASMFEQMDDALNDMIENGNSHPDVFTLNSFVGAYGNAGQIDKMEKWYDE 291
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+ + PDI T+N I S +++K +D M + V Y ++ ++ A
Sbjct: 292 FQLMGIKPDITTFNTMIKSYGKAGMYEKMKTVMDFME-KRFFTPTIVTYNTVIEVFGKAG 350
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
+ + L + ITY L+ Y+ +G DK+D I + + + + + +
Sbjct: 351 EIEKMDQHFLKMKHLGVKPNS-ITYCSLVSAYSKVGCIDKVDSIMRHVENSDVVLDTPFF 409
Query: 225 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDIS-ACNRLLGAFSDVGLTEKANEFHMLL 283
CI+S+Y G+LK++GE+ ++ +I+ AC ++ +++ G+TE ++
Sbjct: 410 NCIISAYGQAGNLKKMGELFLAMRERKCEPDNITFAC--MIQSYNTQGMTEAVQNLENMM 467
Query: 284 L 284
+
Sbjct: 468 I 468
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 106/242 (43%), Gaps = 4/242 (1%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
TY LL + + E+A LFE + L +Y +++ Y G +++ VE+
Sbjct: 125 RTYAKLLMMLGKCRQPEEASLLFEIMLSEGLKPTVDVYTALVSAYGQSGLLDQAFSTVED 184
Query: 105 IKRK-NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
+K + PD++TY++ I CA D ++ L EMS G + V Y ++++ Y A
Sbjct: 185 MKSVVDCEPDVYTYSILIRCCAKFRRFDLIEHVLAEMSY-LGIKCNCVTYNSIIDGYGKA 243
Query: 164 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 223
S + + E + T + + Y G DK+++ + ++ K
Sbjct: 244 SMFEQMDDALNDMIENGNSHPDVFTLNSFVGAYGNAGQIDKMEKWYDEFQLMGIKPDITT 303
Query: 224 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 283
+ ++ SY G +++ ++D ++ + I N ++ F G EK ++ H L
Sbjct: 304 FNTMIKSYGKAGMYEKMKTVMDFMEKRFFTP-TIVTYNTVIEVFGKAGEIEKMDQ-HFLK 361
Query: 284 LQ 285
++
Sbjct: 362 MK 363
>gi|297606902|ref|NP_001059180.2| Os07g0213300 [Oryza sativa Japonica Group]
gi|215767816|dbj|BAH00045.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255677604|dbj|BAF21094.2| Os07g0213300 [Oryza sativa Japonica Group]
Length = 677
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 100/207 (48%), Gaps = 4/207 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+YT+LL+ Y + EKA E+F ++K+++ N + YN ++ Y S G +++ ++ E+
Sbjct: 260 SYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEM 319
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSD-DWVKYVNLVNIYITAS 164
++ + PD+ + + +++C I +++ L+ + S G D + V Y + + Y++
Sbjct: 320 EKDGIQPDVVSISTLLAACGRCRQITRIETILE--AARSRGIDLNTVAYNSGIKSYLSFG 377
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
A +S + +TY+ LI + LG + + ++ + +K T Y
Sbjct: 378 DYEKA-LELYTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVSSTKEVY 436
Query: 225 ICILSSYLMLGHLKEVGEIIDQWKQSA 251
++ SY+ G L E K+S
Sbjct: 437 SSLIYSYIKQGKLSEAESTFSSMKKSG 463
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 106/254 (41%), Gaps = 15/254 (5%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
++ Y ++ LYA ++A LF +++ +A +YN ++ + GQ ++E
Sbjct: 11 NDIYGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIME 70
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
++ R + P TYN I++C A N + + +M+ + G D LV I
Sbjct: 71 DMLRAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPD-------LVTHNIVL 123
Query: 164 SHLVNAESSTLVEAEKSITQRQWITYD-----FLIILYAGLGNKDKIDQIWKSLRMTKQK 218
S L N + + I + +T D +I +G + +++ S+R + K
Sbjct: 124 SALKNGAQYSKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTK 183
Query: 219 MTSR--NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
Y I+ SY + G ++ I D +I A N LLGA++ G+ +A
Sbjct: 184 CPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKP-NIVAYNSLLGAYASRGMHREA 242
Query: 277 NEFHMLLLQKNCAP 290
L+ + P
Sbjct: 243 LAIFNLIKKNGLRP 256
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 97/226 (42%), Gaps = 3/226 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT+++H Y E + +F+ + + N + YN ++ Y S G + + I
Sbjct: 190 TYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLI 249
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K+ + PDI +Y +++ + ++ ++ ++M +S + V Y L++ Y +A
Sbjct: 250 KKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNK-VSYNALIDAYGSAGM 308
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
L A L E EK Q ++ L+ +I+ I ++ R + + Y
Sbjct: 309 LKEA-VGLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYN 367
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 271
+ SYL G ++ E+ ++S D N L+ S +G
Sbjct: 368 SGIKSYLSFGDYEKALELYTSMRESNVKP-DAVTYNILISGSSKLG 412
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 46 TYTALLHLY-AGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
TYT L+ Y AG W ++A +LF+ ++ + + +A++ + +M + G+ E+V ++E
Sbjct: 470 TYTTLIQAYNAGGGW-KRAWDLFKEMEVNGIPPDAIICSSLMEAFNKGGEPERVLQLMEF 528
Query: 105 IKRKNVVPDIFTYNLWISSC 124
+K+K++ + +Y I+SC
Sbjct: 529 MKKKSIPLNQKSYFEIIASC 548
>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
Length = 465
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 109/257 (42%), Gaps = 13/257 (5%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L+ A ++AE+L ER+K S + + + Y+ + G+V V+E++
Sbjct: 189 TYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQM 248
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ + P++ TYN + + ID + +++M+ G + V Y +V+
Sbjct: 249 RDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGR 308
Query: 166 LVNAESSTLVEA-EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR---MTKQKMTS 221
E+ +++EA ++ + +TY L+ GL KI++ +++R M K +
Sbjct: 309 --TQEARSVMEAMARAGCRPDVVTYSSLV---NGLCKAGKIEEAVEAVREMAMEGCKPNA 363
Query: 222 RNYICILSSYLMLGHLKEVGEIIDQWKQSAT----SDFDISACNRLLGAFSDVGLTEKAN 277
Y ++ G L E ++++ +S N L+G G + A
Sbjct: 364 VTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDAL 423
Query: 278 EFHMLLLQKNCAPTNAS 294
+F + + C P S
Sbjct: 424 KFFQRMRSQGCDPDGVS 440
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 98/245 (40%), Gaps = 2/245 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY+ LL Y A E++ EL + V L +ALMY +++ ++ + ++EE+
Sbjct: 84 TYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLCKSARLGEALELLEEM 143
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
R P + T+N IS C N++ L +M+ SG D V Y L++ A
Sbjct: 144 IRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMA-ASGVKADVVTYNTLMDGLCKAGR 202
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
L AE L + S + Y + G Q+ + +R + Y
Sbjct: 203 LQEAE-QLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYN 261
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 285
IL G + E+++Q S ++ + ++ +G T++A + +
Sbjct: 262 TILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMAR 321
Query: 286 KNCAP 290
C P
Sbjct: 322 AGCRP 326
Score = 43.9 bits (102), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 63/164 (38%), Gaps = 8/164 (4%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVK 71
Y+T +D + K+ E + + + TY++L++ A E+A E +
Sbjct: 296 YSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMA 355
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI-----KRKNVVPDIFTYNLWISSCAA 126
NA+ Y ++ S G++ + +VEE+ + P + TYN I
Sbjct: 356 MEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCK 415
Query: 127 TLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAE 170
ID KF M G D V Y +V + + AE
Sbjct: 416 AGRIDDALKFFQRMR-SQGCDPDGVSYSTIVEGLARSGRALQAE 458
>gi|225443015|ref|XP_002267278.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Vitis vinifera]
Length = 624
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 83/191 (43%), Gaps = 9/191 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
Y +LL ++A +LF + + L+ +A Y+ + Y V + V++ +
Sbjct: 256 AYNSLLEALCKGGNVDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQVLDRM 315
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+R N+VP++FTYN + + +D+ + LDEM + G S D Y N + +
Sbjct: 316 RRYNLVPNVFTYNCIVKKLCKSEKVDEAYQLLDEM-IERGVSPDLWSY-NAIQAFHCDHC 373
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
VN + EK TY+ ++ + +G D++ +W M R +
Sbjct: 374 EVNKALRLISRMEKENCMPDRHTYNMVLKMLLRVGRFDRVTDVWGG-------MEERGFY 426
Query: 226 CILSSYLMLGH 236
S+Y ++ H
Sbjct: 427 PAASTYAVMVH 437
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 55/120 (45%), Gaps = 2/120 (1%)
Query: 50 LLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKN 109
LL++ K ++A+E F++V + NA Y+ +M + VG + + EE++ +
Sbjct: 191 LLYVLCKRKHVKQAQEFFDKVNVEVMP-NAKTYSILMRGWGDVGDSSEARKLFEEMRERG 249
Query: 110 VVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 169
D+ YN + + N+D+ K EM +G + D Y + Y + + +A
Sbjct: 250 CAVDVVAYNSLLEALCKGGNVDEAYKLFREMG-SNGLAPDACSYSIFIRAYCEVNDIHSA 308
>gi|359490016|ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Vitis vinifera]
Length = 1442
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 114/258 (44%), Gaps = 13/258 (5%)
Query: 40 SAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG-QVEKV 98
S T + Y A++ +YA K +EL + ++ + + +N ++ + G V +
Sbjct: 218 SGNTVQVYNAMMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARLKSGTMVTNL 277
Query: 99 AL-VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 157
A+ ++ E++R + PDI TYN IS+C+ N+++ K ++M D W Y ++
Sbjct: 278 AIELLNEVRRSGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWT-YNAMI 336
Query: 158 NIYITASHLVNAESSTLV-EAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK---SLR 213
++Y ++ E+ L + E +TY+ L+ +A GN DK+ +I + +
Sbjct: 337 SVYGRCG--MSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMG 394
Query: 214 MTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLT 273
K +MT Y I+ Y G ++ K S S D L+ + +
Sbjct: 395 FGKDEMT---YNTIIHMYGKRGQHDLAFQLYSDMKLSGRSP-DAVTYTVLIDSLGKANMI 450
Query: 274 EKANEFHMLLLQKNCAPT 291
++A E +L PT
Sbjct: 451 KEAAEVMSEMLNARVKPT 468
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/215 (17%), Positives = 101/215 (46%), Gaps = 3/215 (1%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
+ ++L LY G +K ++++ ++++ L + YN ++ +Y + E+ ++ E++
Sbjct: 925 WNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMR 984
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
R + P + TY IS+ ++Q ++ + + D ++ ++ ++ + +
Sbjct: 985 RVGLEPKLDTYKSLISAFGKLQMVEQAEELFEGLLSKECKLDRSFYHI-MMKMFRNSGNH 1043
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 226
AE V E + + T L++ Y+G G ++ +++ +L++ +++ Y
Sbjct: 1044 SKAEKLLGVMKEAGV-EPTIATMHLLMVSYSGSGQPEEAEKVLDNLKVEGLPLSTLPYSS 1102
Query: 227 ILSSYLMLG-HLKEVGEIIDQWKQSATSDFDISAC 260
++ +YL G H + ++++ K D I C
Sbjct: 1103 VIDAYLKNGDHNVAIQKLMEMKKDGLEPDHRIWTC 1137
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 47/244 (19%), Positives = 105/244 (43%), Gaps = 3/244 (1%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
+ + AL+H YA + E+A +F + + S N +M + G+++++ +V++E
Sbjct: 783 KVWNALIHAYAASGCYERARAIFNTMMRDGPSPTVDSVNGLMQALIVDGRLDELYVVIQE 842
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
++ + L + + A NI +VKK M +G Y ++ +
Sbjct: 843 LQDMGFKISKSSITLMLDAFAHAGNIFEVKKIYQGMKA-AGYFPTMHLYRIMIGLLAKGK 901
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
+ + E + + E E + + ++ ++ LY G+G+ K Q+++ ++ K Y
Sbjct: 902 RVRDVE-AMVSEMEVARFKPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTY 960
Query: 225 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 284
++ Y +E ++ + ++ + L+ AF + + E+A E LL
Sbjct: 961 NTLILMYCRDRRPEEGLSLMHEMRRVGLEP-KLDTYKSLISAFGKLQMVEQAEELFEGLL 1019
Query: 285 QKNC 288
K C
Sbjct: 1020 SKEC 1023
Score = 44.7 bits (104), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 58/117 (49%), Gaps = 1/117 (0%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
+TY +L+ + + E+AEELFE + + Y+ MM ++ + G K ++
Sbjct: 993 DTYKSLISAFGKLQMVEQAEELFEGLLSKECKLDRSFYHIMMKMFRNSGNHSKAEKLLGV 1052
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 161
+K V P I T +L + S + + ++ +K LD + + G + Y ++++ Y+
Sbjct: 1053 MKEAGVEPTIATMHLLMVSYSGSGQPEEAEKVLDNLKVE-GLPLSTLPYSSVIDAYL 1108
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 38/209 (18%), Positives = 83/209 (39%), Gaps = 38/209 (18%)
Query: 82 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 141
YN M+++Y G + + ++++ K +PD TYN + + A N+D+VK+ ++M
Sbjct: 332 YNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMV 391
Query: 142 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 201
G D+ +TY+ +I +Y G
Sbjct: 392 KMGFGKDE-------------------------------------MTYNTIIHMYGKRGQ 414
Query: 202 KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 261
D Q++ ++++ + + Y ++ S +KE E++ + +A + +
Sbjct: 415 HDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEM-LNARVKPTLRTFS 473
Query: 262 RLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
L+ ++ G +A E +L+ P
Sbjct: 474 ALICGYAKAGKRVEAEETFDCMLRSGIKP 502
Score = 37.7 bits (86), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 45/246 (18%), Positives = 96/246 (39%), Gaps = 8/246 (3%)
Query: 7 FVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAE 64
F +S S +D I ++ ++G+ + T Y ++ L A K E
Sbjct: 848 FKISKSSITLMLDAFAHAGNIFEVKKIYQGMKAAGYFPTMHLYRIMIGLLAKGKRVRDVE 907
Query: 65 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 124
+ ++ + + ++N ++ LY +G +K V + I+ + PD TYN I
Sbjct: 908 AMVSEMEVARFKPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMY 967
Query: 125 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES--STLVEAEKSIT 182
++ + EM G Y +L++ + + AE L+ E +
Sbjct: 968 CRDRRPEEGLSLMHEMR-RVGLEPKLDTYKSLISAFGKLQMVEQAEELFEGLLSKECKLD 1026
Query: 183 QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 242
+ Y ++ ++ GN K +++ ++ + T ++ SY G +E +
Sbjct: 1027 RS---FYHIMMKMFRNSGNHSKAEKLLGVMKEAGVEPTIATMHLLMVSYSGSGQPEEAEK 1083
Query: 243 IIDQWK 248
++D K
Sbjct: 1084 VLDNLK 1089
>gi|125580966|gb|EAZ21897.1| hypothetical protein OsJ_05550 [Oryza sativa Japonica Group]
Length = 595
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 103/236 (43%), Gaps = 6/236 (2%)
Query: 36 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 95
G+P +A Y A L A+ TEKA E+++R+K+ N + M+ +Y Q
Sbjct: 240 GIPPNATV---YNAYLDGLLKARCTEKAVEVYQRMKRERCRANTETFTLMINVYGKAKQP 296
Query: 96 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 155
V E+K P+I TY +++ A ++ ++ +EM +G D Y
Sbjct: 297 MSSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQ-QAGHEPDVYAYNA 355
Query: 156 LVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMT 215
L+ Y A L S + + +Y+ L+ Y G + + +++ L+
Sbjct: 356 LMEAYSRAG-LPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHEDAEAVFEELKQR 414
Query: 216 KQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 271
T ++++ +L+++ G+ E++ Q +S + D A N +L A++ G
Sbjct: 415 GMSPTMKSHMLLLAAHARSGNATRCEEVMAQLHKSGLTP-DTFALNAMLNAYARAG 469
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 97/233 (41%), Gaps = 14/233 (6%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
+ET+T ++++Y AK + ++F +K N Y ++ + G EK V E
Sbjct: 280 TETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFE 339
Query: 104 EIKRKNVVPDIFTYNLWI---SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
E+++ PD++ YN + S ++ + M C+ D Y LV+ Y
Sbjct: 340 EMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGCEP----DRASYNILVDAY 395
Query: 161 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 220
A +AE + E ++ ++ L+ +A GN + +++ L K +T
Sbjct: 396 GRAGLHEDAE-AVFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVMAQLH--KSGLT 452
Query: 221 SRNYI--CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 271
+ +L++Y G L ++ + ++ D D+ N + A+ G
Sbjct: 453 PDTFALNAMLNAYARAGRLDDMERLFAAMERRG--DADVGTYNVAVNAYGRAG 503
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 46/249 (18%), Positives = 95/249 (38%), Gaps = 40/249 (16%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y L+ Y + KAE ++ + ++ Y ++ Y + G + + V+ E++
Sbjct: 178 YNLLIESYGKKRQLNKAESIYMALLEAQCVPTEDTYALLLRAYCNAGSLHRAEGVISEMR 237
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
+ P+ YN ++ ++ + M + ++ + ++N+Y A
Sbjct: 238 EHGIPPNATVYNAYLDGLLKARCTEKAVEVYQRMKRERCRANTET-FTLMINVYGKAKQP 296
Query: 167 VNAESSTLVEAEKSITQRQWI-TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
++ S + KSI + I TY L+ +A G +K +++++ +
Sbjct: 297 MS--SMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEM------------- 341
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 285
Q A + D+ A N L+ A+S GL + A+E L+
Sbjct: 342 -----------------------QQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQH 378
Query: 286 KNCAPTNAS 294
C P AS
Sbjct: 379 MGCEPDRAS 387
>gi|297832604|ref|XP_002884184.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330024|gb|EFH60443.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 829
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 135/307 (43%), Gaps = 29/307 (9%)
Query: 7 FVLSDSDYATRID-----LMTKVFGIHS----GERYFEGLPLSAKTSE--TYTALLHLYA 55
VLS + A ++D ++ ++ G S + + +PL + YT +LH Y+
Sbjct: 169 LVLSSNSGALKLDHHVIEILVRILGRESQYSVAAKLLDKIPLQDYMLDVRAYTTILHAYS 228
Query: 56 GAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV-EKVALVVEEIKRKNVVPDI 114
EKA LFER+K+ S + YN ++ ++ +G+ K+ V+EE++ K + D
Sbjct: 229 RTGKYEKAINLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLEEMRSKGLKFDE 288
Query: 115 FTYNLWISSCAATLNIDQVKKFLDEM-SCDSGGSDDWVKYVNLVNIYITASHLVNAESST 173
FT + +S+CA + + K F E+ SC G V Y L+ ++ A A S
Sbjct: 289 FTCSTVLSACAREGLLREAKDFFAELKSC--GYEPGTVTYNALLQVFGKAGVYTEA-LSV 345
Query: 174 LVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN---YICILSS 230
L E E++ +TY+ L+ YA G + + + M QK N Y ++ +
Sbjct: 346 LKEMEENNCPADSVTYNELVAAYARAGFSKEAAVV---IEMMTQKGVMPNAITYTTVIDA 402
Query: 231 YLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL---QKN 287
Y G E ++ K++ + N +L S +G ++NE +L
Sbjct: 403 YGKAGKEDEALKLFYSMKEAGCVP-NTCTYNAVL---SMLGKKSRSNEMIKMLCDMKSNG 458
Query: 288 CAPTNAS 294
C P A+
Sbjct: 459 CFPNRAT 465
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 52/96 (54%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY +L+ +Y KAEE+ + +++S L + + YN ++ + G +++ ++ E+
Sbjct: 675 TYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRKGLMQEAVRMLSEM 734
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 141
+ + P IFTYN ++S A +++ ++ M+
Sbjct: 735 TERGIRPCIFTYNTFVSGYTAMGMYGEIEDVIECMA 770
Score = 40.4 bits (93), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 18/95 (18%), Positives = 49/95 (51%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
+ ++L ++ ++AE + + + + L+ + + YN +M +Y+ G+ K +++ ++
Sbjct: 641 FNSMLSIFTRNNMYDQAEGILQSIHEDGLNPDLVTYNSLMDMYVRRGECWKAEEILKTLE 700
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 141
+ + PD+ +YN I + + + L EM+
Sbjct: 701 KSQLKPDLVSYNTVIKGFCRKGLMQEAVRMLSEMT 735
>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
Length = 611
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 90/201 (44%), Gaps = 2/201 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY AL++ Y K E+A ELF+ + + L+ N + +N ++ Y G++E+ L+ + +
Sbjct: 375 TYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVM 434
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K +P+ TYN I +++VK L+EM C G D V Y L++ +
Sbjct: 435 LEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQC-RGVKADTVTYNILISAWCEKKE 493
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
A +K + +TY+ L+ Y GN + K + + Y
Sbjct: 494 PKKAARLIDEMLDKGLKPSH-LTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYN 552
Query: 226 CILSSYLMLGHLKEVGEIIDQ 246
++ Y G L++ ++++
Sbjct: 553 VLIQGYCRKGKLEDANGLLNE 573
Score = 44.3 bits (103), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 36/206 (17%), Positives = 91/206 (44%), Gaps = 2/206 (0%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
+ S T+ L+ + + A ++FE ++ L + YN ++ + G++ + +
Sbjct: 300 SPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKV 359
Query: 101 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
+++E+ N+ P++ TYN I+ +++ ++ D + G + + + + L++ Y
Sbjct: 360 LLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIG-KQGLTPNVITFNTLLHGY 418
Query: 161 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 220
+ A V EK TY+ LI+ + G +++ + ++ K
Sbjct: 419 CKFGKMEEAFLLQKVMLEKGFLPNAS-TYNCLIVGFCREGKMEEVKNLLNEMQCRGVKAD 477
Query: 221 SRNYICILSSYLMLGHLKEVGEIIDQ 246
+ Y ++S++ K+ +ID+
Sbjct: 478 TVTYNILISAWCEKKEPKKAARLIDE 503
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 46/231 (19%), Positives = 100/231 (43%), Gaps = 3/231 (1%)
Query: 62 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 121
KA+ + + + ++ +S N++ +N ++ + + V EE++ + + P + TYN +
Sbjct: 286 KADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLV 345
Query: 122 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI 181
+ +++ K LDEM S + + Y L+N Y L A ++ +
Sbjct: 346 NGLCNEGKLNEAKVLLDEM-LSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGL 404
Query: 182 TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVG 241
T IT++ L+ Y G ++ + K + + Y C++ + G ++EV
Sbjct: 405 TP-NVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVK 463
Query: 242 EIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 292
++++ Q D N L+ A+ + +KA +L K P++
Sbjct: 464 NLLNEM-QCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSH 513
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 107/239 (44%), Gaps = 15/239 (6%)
Query: 63 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 122
E +++ + + +S N + +N ++ VG++ K VV+++K P++ TYN I
Sbjct: 214 VEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLID 273
Query: 123 SCAATLNIDQVKK---FLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK 179
+ ++ K L EM ++ S + V + L++ + +L +A E +
Sbjct: 274 GYCKMGRVGKMYKADAILKEM-VENKVSPNSVTFNVLIDGFCKDENL-SAALKVFEEMQS 331
Query: 180 SITQRQWITYDFLIILYAGLGNKDKIDQ---IWKSLRMTKQKMTSRNYICILSSYLMLGH 236
+ +TY+ L+ GL N+ K+++ + + + K Y +++ Y
Sbjct: 332 QGLKPTVVTYNSLV---NGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKL 388
Query: 237 LKEVGEIIDQ-WKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
L+E E+ D KQ T ++ N LL + G E+A ++L+K P NAS
Sbjct: 389 LEEARELFDNIGKQGLTP--NVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLP-NAS 444
>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 777
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 64/124 (51%), Gaps = 4/124 (3%)
Query: 35 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 94
G+P +TS TY++L+H + + A +L + +++ LS N + Y ++ Y +GQ
Sbjct: 611 RGIP---QTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQ 667
Query: 95 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 154
+ KV +++E+ NV P+ TY + I+ N+ K L+EM+ G D V Y
Sbjct: 668 MHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMA-QKGIVPDAVTYN 726
Query: 155 NLVN 158
L N
Sbjct: 727 ALTN 730
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 102/237 (43%), Gaps = 3/237 (1%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
A + T AL+H A E+A +L + + + L +++ YN ++ G+VE+
Sbjct: 439 AANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFK 498
Query: 101 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
+ EE+ R+ + PD++TYN+ + I++ E +G D Y +++ Y
Sbjct: 499 LKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECK-KNGNFPDAYTYGIMIDGY 557
Query: 161 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 220
A+ + E E ++ + Y LI Y GN + ++ +R T
Sbjct: 558 CKANRVEEGE-KLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQT 616
Query: 221 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 277
S Y ++ +G + +++D+ ++ S ++ L+G + +G K +
Sbjct: 617 SATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSP-NVVCYTALIGGYCKLGQMHKVD 672
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 93/231 (40%), Gaps = 3/231 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY LLH E+A L+ K++ +A Y M+ Y +VE+ + +E+
Sbjct: 514 TYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEM 573
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ + Y I + N+ + + D+M G Y +L++ ++
Sbjct: 574 VTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMR-SRGIPQTSATYSSLIH-GLSNIG 631
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
LV++ + L E K + Y LI Y LG K+D I + + + Y
Sbjct: 632 LVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYT 691
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
+++ + LG++K +++++ Q D N L F G E+A
Sbjct: 692 IMINGHCKLGNMKAAAKLLNEMAQKGIVP-DAVTYNALTNGFCKEGKMEEA 741
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 54/112 (48%), Gaps = 1/112 (0%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
YTAL+ Y K + + + + +N+ N + Y M+ + +G ++ A ++ E+
Sbjct: 655 YTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMA 714
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 158
+K +VPD TYN + +++ K D MS G S D + Y L++
Sbjct: 715 QKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMS-TGGISLDDITYTTLID 765
Score = 43.5 bits (101), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 61/123 (49%), Gaps = 1/123 (0%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
++ +++ + + A ELF ++++ ++ N + YN ++ G++++ E+++
Sbjct: 200 FSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKME 259
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
++ V P + TY + I+ D+ L EMS D G + + V Y L++ Y ++
Sbjct: 260 KERVKPSLVTYGVLINGLVKLERFDEANCILKEMS-DRGYAPNNVVYNTLIDGYCRIGNI 318
Query: 167 VNA 169
A
Sbjct: 319 STA 321
Score = 40.8 bits (94), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 42/218 (19%), Positives = 94/218 (43%), Gaps = 3/218 (1%)
Query: 62 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 121
+A EL+ R+ + + N + N ++ G E+ A +++E+ + +V D +YN I
Sbjct: 425 EAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLI 484
Query: 122 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI 181
+C +++ K +EM G D Y L++ + A E +K+
Sbjct: 485 LACCKEGKVEEGFKLKEEM-VRRGIQPDMYTYNMLLHGLCNMGKIEEA-GGLWHECKKNG 542
Query: 182 TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVG 241
TY +I Y ++ +++++ + K + + Y ++ +Y G+++E
Sbjct: 543 NFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAF 602
Query: 242 EIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 279
+ D + + + L+ S++GL + AN+
Sbjct: 603 RLRDDMRSRGIPQTSATY-SSLIHGLSNIGLVDSANQL 639
>gi|449455399|ref|XP_004145440.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Cucumis sativus]
Length = 576
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 107/256 (41%), Gaps = 17/256 (6%)
Query: 42 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 101
T++TYT L+++Y + A+ +F+ ++ N + ++ G EK +
Sbjct: 258 PTTDTYTMLINVYGKESKSHMAQNIFDEMRTQRCKPNICTFTALVNALAREGLCEKAEEI 317
Query: 102 VEEIKRKNVVPDIFTYNLWISS---CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 158
E+++ PD++ YN + S ++ + M C+ D Y +V+
Sbjct: 318 FEQMQEAGYEPDVYAYNALMESYSRAGFPYGAAEIFSLMQHMGCEP----DRASYNIMVD 373
Query: 159 IYITASHLVNAESSTLVEAEKSITQRQWITYDFLII-LYAGLGNKDKIDQIWKSLRMTKQ 217
Y A ++ ++ + E K I + L++ Y+ GN K + I +M K
Sbjct: 374 AYGRAG--LHEDAQAVFEEMKRIGITPTMKSHMLLLSAYSSAGNVAKCEDIIG--QMHKS 429
Query: 218 KMTSRNYICILSSYLML-GHLKEVGEIIDQWK--QSATSDFDISACNRLLGAFSDVGLTE 274
+ + +++S L L G L + G++ D + Q DIS N L+ + G E
Sbjct: 430 GLKPDTF--VMNSMLNLYGRLGQFGKMEDLFSTMQKGPCRADISTYNILINVYGRAGFVE 487
Query: 275 KANEFHMLLLQKNCAP 290
+ E LL KN P
Sbjct: 488 RMEELFQLLPAKNLEP 503
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 1/106 (0%)
Query: 38 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 97
P A S TY L+++Y A + E+ EELF+ + NL + + + + Y ++
Sbjct: 465 PCRADIS-TYNILINVYGRAGFVERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKR 523
Query: 98 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCD 143
+ E++ PD T + +S+C++ I+QV + M D
Sbjct: 524 CLELFEKMIDAGCYPDGGTAKVLLSACSSEEQIEQVTNVVRTMHKD 569
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 50/248 (20%), Positives = 87/248 (35%), Gaps = 38/248 (15%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y L+ Y + E + + +S+ Y ++ Y G +EK V E++
Sbjct: 158 YNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGLLEKAEAVFAEMR 217
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
+ + P YN +I GG++ V V I+ H
Sbjct: 218 KYGLSPSAIVYNAYIDGLV------------------KGGNN-----VKAVEIF----HR 250
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 226
+ + Q TY LI +Y I+ +R + K +
Sbjct: 251 MKRDG----------CQPTTDTYTMLINVYGKESKSHMAQNIFDEMRTQRCKPNICTFTA 300
Query: 227 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 286
++++ G ++ EI +Q Q A + D+ A N L+ ++S G A E L+
Sbjct: 301 LVNALAREGLCEKAEEIFEQM-QEAGYEPDVYAYNALMESYSRAGFPYGAAEIFSLMQHM 359
Query: 287 NCAPTNAS 294
C P AS
Sbjct: 360 GCEPDRAS 367
>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/249 (19%), Positives = 112/249 (44%), Gaps = 3/249 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
++++L+ +++ + ++A F +K+ L + ++Y +M Y G + + + +E+
Sbjct: 108 SFSSLMAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEM 167
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ V D+ YN ++ + K DEM + G D+ + L++ + +
Sbjct: 168 LEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEM-VERGALPDFYTFTTLIHGHCQDGN 226
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ A S +++I + + Y+ LI + +G +K ++W + K Y
Sbjct: 227 MTKALSLFGTMTQRNI-KPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYG 285
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 285
++++Y +GH+ E + D + + CN ++ + G + KA+EF ++
Sbjct: 286 ILINAYCSVGHVSEAFRLWDVMIEKGIKP-TLVTCNTVIKGYCRSGDSSKADEFLGRMIA 344
Query: 286 KNCAPTNAS 294
K AP + S
Sbjct: 345 KGVAPDHIS 353
Score = 37.7 bits (86), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 52/125 (41%), Gaps = 3/125 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L+ Y E+A E+ + L + YN ++ G+ + ++ E+
Sbjct: 3 TYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEM 62
Query: 106 KRKNVVPDIFTYN-LWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+ PD TYN L + SC N + K+ EM G D V + +L+ ++
Sbjct: 63 LNIGLSPDTTTYNTLLVESCRRD-NFSEAKEIFGEM-LRQGVVPDLVSFSSLMAVFSRNR 120
Query: 165 HLVNA 169
HL A
Sbjct: 121 HLDQA 125
>gi|297737369|emb|CBI26570.3| unnamed protein product [Vitis vinifera]
Length = 1042
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 114/258 (44%), Gaps = 13/258 (5%)
Query: 40 SAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG-QVEKV 98
S T + Y A++ +YA K +EL + ++ + + +N ++ + G V +
Sbjct: 193 SGNTVQVYNAMMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARLKSGTMVTNL 252
Query: 99 AL-VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 157
A+ ++ E++R + PDI TYN IS+C+ N+++ K ++M D W Y ++
Sbjct: 253 AIELLNEVRRSGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWT-YNAMI 311
Query: 158 NIYITASHLVNAESSTLV-EAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK---SLR 213
++Y ++ E+ L + E +TY+ L+ +A GN DK+ +I + +
Sbjct: 312 SVYGRCG--MSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMG 369
Query: 214 MTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLT 273
K +MT Y I+ Y G ++ K S S D L+ + +
Sbjct: 370 FGKDEMT---YNTIIHMYGKRGQHDLAFQLYSDMKLSGRSP-DAVTYTVLIDSLGKANMI 425
Query: 274 EKANEFHMLLLQKNCAPT 291
++A E +L PT
Sbjct: 426 KEAAEVMSEMLNARVKPT 443
>gi|15228936|ref|NP_188942.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273922|sp|Q9LS88.1|PP250_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g23020
gi|9294191|dbj|BAB02093.1| unnamed protein product [Arabidopsis thaliana]
gi|332643185|gb|AEE76706.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 842
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 131/284 (46%), Gaps = 11/284 (3%)
Query: 19 DLMTKVFGI-HSGER---YFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQ 72
++M K +GI S E+ FE + T + TY L+ + A A K E++++
Sbjct: 509 NVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRE 568
Query: 73 SNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQ 132
+ + + Y +++ ++ +GQ+ V +E+ N+ PD+ Y + I++ A T N+ Q
Sbjct: 569 TGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQ 628
Query: 133 VKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES--STLVEAEKSITQRQWITYD 190
+++ M ++G + V Y +L+ +Y +L AE+ L+++ T +
Sbjct: 629 AMSYVEAMK-EAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSN 687
Query: 191 FLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQS 250
+I LY+ K + I+ S++ + + + +L Y G +E +I Q ++
Sbjct: 688 CMINLYSERSMVRKAEAIFDSMKQ-RGEANEFTFAMMLCMYKKNGRFEEATQIAKQMREM 746
Query: 251 ATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
+S N +LG F+ G ++A E ++ P +++
Sbjct: 747 KILTDPLSY-NSVLGLFALDGRFKEAVETFKEMVSSGIQPDDST 789
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 90/203 (44%), Gaps = 8/203 (3%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 102
+S TY ++ Y + ++A E F+R+ + + + +N M+ +Y + GQ+ +V ++
Sbjct: 297 SSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLM 356
Query: 103 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 162
+ +K + PD TYN+ IS +I++ + EM D G D V Y L+ + +
Sbjct: 357 KTMKL-HCAPDTRTYNILISLHTKNNDIERAGAYFKEMK-DDGLKPDPVSYRTLLYAF-S 413
Query: 163 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM--TKQKMT 220
H+V + E + + T L +Y + +++ W + M+
Sbjct: 414 IRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYV---EAEMLEKSWSWFKRFHVAGNMS 470
Query: 221 SRNYICILSSYLMLGHLKEVGEI 243
S Y + +Y G+L E +
Sbjct: 471 SEGYSANIDAYGERGYLSEAERV 493
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 56/119 (47%), Gaps = 8/119 (6%)
Query: 11 DSDYATRIDLMTKV-FGIHSGERYFEGLPLSAKTSETYTAL-LHLYAGAKWTEKAEELF- 67
+S Y T ID+ +K +H+ + + + E T + L +Y A+ +KAEE F
Sbjct: 222 NSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFK 281
Query: 68 -----ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 121
E S++ ++ YN M+ Y GQ+++ + + + + +VP T+N I
Sbjct: 282 KWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMI 340
>gi|297800104|ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
lyrata]
gi|297313772|gb|EFH44195.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
lyrata]
Length = 817
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 97/213 (45%), Gaps = 14/213 (6%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY+ ++ A+ TE+ ++LF+ + +NL N ++YN ++ Y G++ + E++
Sbjct: 604 TYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDM 663
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K K + P+ TY I + +++ K L+EM + G + Y L++ Y
Sbjct: 664 KHKGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRME-GLEPNVFHYTALIDGYGKLGQ 722
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR---MTKQKMTSR 222
+V E L E ITY +I YA GN + ++ +R + +T +
Sbjct: 723 MVKVE-CLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLHEMREKGIVPDSITYK 781
Query: 223 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDF 255
+I G+LK+ G ++ +K S ++
Sbjct: 782 EFI--------YGYLKQ-GGVLQAFKGSDEENY 805
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 1/129 (0%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
+ S TYT+L+ + E+A+ L E ++ L N Y ++ Y +GQ+ KV
Sbjct: 669 SPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVEC 728
Query: 101 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
++ E+ KNV P+ TY + I A N+ + + L EM + G D + Y + Y
Sbjct: 729 LLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLHEMR-EKGIVPDSITYKEFIYGY 787
Query: 161 ITASHLVNA 169
+ ++ A
Sbjct: 788 LKQGGVLQA 796
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 94/204 (46%), Gaps = 10/204 (4%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
+T ++ + E+A ELF +++++ + N + YN ++ G+ ++ + E++
Sbjct: 255 FTTAINAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMV 314
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
+ V P + TY++ + I L EM+ + G + + Y NL++ I A L
Sbjct: 315 ERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMT-EKGFPPNVIVYNNLIDSLIEAGSL 373
Query: 167 VNA--ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK---SLRMTKQKMTS 221
A +V S+T TY+ LI Y G D +++ K S+ + +
Sbjct: 374 NKAIEIKDLMVSKGLSLTSS---TYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSF 430
Query: 222 RNYICILSSYLML-GHLKEVGEII 244
+ IC+L S+ M L+ VGE++
Sbjct: 431 TSVICLLCSHHMFDSALRFVGEML 454
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/235 (19%), Positives = 99/235 (42%), Gaps = 2/235 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+Y L+ G K ++A + + + L + Y+ ++ +++ +VE+ +
Sbjct: 534 SYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDC 593
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
KR ++PD++TY++ I C ++ +K DEM ++ + V Y +L+ Y +
Sbjct: 594 KRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNN-LQPNTVVYNHLIGAYCRSGR 652
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
L A K I+ TY LI + + ++ + + +RM + +Y
Sbjct: 653 LSMALELREDMKHKGISPNSA-TYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYT 711
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 280
++ Y LG + +V ++ + I+ + G D +TE + H
Sbjct: 712 ALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLH 766
>gi|125559009|gb|EAZ04545.1| hypothetical protein OsI_26694 [Oryza sativa Indica Group]
Length = 784
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 77/171 (45%), Gaps = 18/171 (10%)
Query: 9 LSDSDYATRID-----------LMTKVFGIHSGERYFEGLPLSAKTSE----TYTALLHL 53
LSD Y+ RI+ + +KV + E+ F L L K A++ +
Sbjct: 545 LSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAF--LELRQKRCSLDINVLNAMVSI 602
Query: 54 YAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPD 113
Y + K E++ +K+S ++ +A YN +M +Y +G EK ++ EIK V PD
Sbjct: 603 YGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPD 662
Query: 114 IFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
++YN I + + + + EM C SG D V Y V Y++ S
Sbjct: 663 RYSYNTVIYAYGRKGQMKEASRLFSEMKC-SGLKPDVVTYNIFVKSYVSNS 712
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/249 (20%), Positives = 112/249 (44%), Gaps = 11/249 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+ +LL +Y A+ ++A E+ + +++ + + YN +++ Y+ G +E+ + +E+
Sbjct: 280 TFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEM 339
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ K + PD+ TY IS ID DEM +G + Y L+ + H
Sbjct: 340 EVKGIKPDVVTYTTLISGLDRAGKIDAAIVEYDEM-VRNGCKPNLCTYNALIKM-----H 393
Query: 166 LVNAESSTLVEAEKSITQRQW----ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 221
V + ++ + + +T++ L+ ++ G ++ ++K ++
Sbjct: 394 GVRGKFPEMMAVFDELRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPER 453
Query: 222 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 281
Y+ ++SSY G +I + ++ D+S N +L A + G E+A +
Sbjct: 454 DTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYP-DVSTYNAVLSALARGGRWEQAEKLFA 512
Query: 282 LLLQKNCAP 290
+ +++C P
Sbjct: 513 EMEERDCKP 521
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 85/200 (42%), Gaps = 8/200 (4%)
Query: 4 HKEFVLSDSDY-ATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEK 62
H E VL AT I +M + + + P + YTAL+ ++ A
Sbjct: 133 HGEGVLHHPRVLATAIRVMARAGRLAEASALLDAAP--GPDAGAYTALVSAFSRAGRFRD 190
Query: 63 AEELFERVKQSNLSFNALMYNEMMTLY--MSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
A +F R+ S + + YN ++ +Y M+V E V LV +K V PD +TYN
Sbjct: 191 AVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVAS-MKEHGVAPDRYTYNTL 249
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
IS C + + DEM SG D V + +L+++Y A A + E E+
Sbjct: 250 ISCCRRRALYKEAAQVFDEMKA-SGFEPDKVTFNSLLDVYGKARRHDEA-IEVIQEMERV 307
Query: 181 ITQRQWITYDFLIILYAGLG 200
+TY+ LI Y G
Sbjct: 308 GCPPSVVTYNSLISSYVKDG 327
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/288 (18%), Positives = 122/288 (42%), Gaps = 52/288 (18%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
+TY +L+ Y+ + A ++++R+ ++ + + YN +++ G+ E+ + E
Sbjct: 454 DTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAE 513
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
++ ++ PD ++Y+ + + A +D++K D++ + +W LV +
Sbjct: 514 MEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNW-----LVKTLV--- 565
Query: 165 HLVNAESSTLVEAEKSITQ-RQ-------------------------------------- 185
LVN++ + L EAEK+ + RQ
Sbjct: 566 -LVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAI 624
Query: 186 ---WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 242
TY+ L+ +Y+ LG+ +K + I ++ + + +Y ++ +Y G +KE
Sbjct: 625 NLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASR 684
Query: 243 IIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
+ + K S D+ N + ++ + E+A E ++ + C P
Sbjct: 685 LFSEMKCSGLKP-DVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKP 731
>gi|15242557|ref|NP_195906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181167|sp|Q9LYZ9.1|PP362_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g02860
gi|7413561|emb|CAB86040.1| putative protein [Arabidopsis thaliana]
gi|332003145|gb|AED90528.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 117/267 (43%), Gaps = 6/267 (2%)
Query: 8 VLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEE 65
+L +S A I ++ K + S F GL + + +YT+L+ +A + +A
Sbjct: 170 MLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVN 229
Query: 66 LFERVKQSNLSFNALMYNEMMTLYMSVGQV-EKVALVVEEIKRKNVVPDIFTYNLWISSC 124
+F+++++ + YN ++ ++ +G K+ +VE++K + PD +TYN I+ C
Sbjct: 230 VFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCC 289
Query: 125 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR 184
+ + +EM +G S D V Y L+++Y SH L E +
Sbjct: 290 KRGSLHQEAAQVFEEMKA-AGFSYDKVTYNALLDVY-GKSHRPKEAMKVLNEMVLNGFSP 347
Query: 185 QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEII 244
+TY+ LI YA G D+ ++ + K Y +LS + G ++ I
Sbjct: 348 SIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIF 407
Query: 245 DQWKQSATSDFDISACNRLLGAFSDVG 271
++ + + +I N + + + G
Sbjct: 408 EEMRNAGCKP-NICTFNAFIKMYGNRG 433
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 107/250 (42%), Gaps = 3/250 (1%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
A + TY L+ ++A ++FE +K + S++ + YN ++ +Y + ++
Sbjct: 276 APDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMK 335
Query: 101 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
V+ E+ P I TYN IS+ A +D+ + ++M+ + G D Y L++ +
Sbjct: 336 VLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMA-EKGTKPDVFTYTTLLSGF 394
Query: 161 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 220
A V + S E + + T++ I +Y G ++ +I+ + +
Sbjct: 395 ERAGK-VESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPD 453
Query: 221 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 280
+ +L+ + G EV + + K++ + N L+ A+S G E+A +
Sbjct: 454 IVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVP-ERETFNTLISAYSRCGSFEQAMTVY 512
Query: 281 MLLLQKNCAP 290
+L P
Sbjct: 513 RRMLDAGVTP 522
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 97/233 (41%), Gaps = 14/233 (6%)
Query: 46 TYTALLHLYA--GAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
TY +L+++ G W K L E++K ++ +A YN ++T ++ A V E
Sbjct: 245 TYNVILNVFGKMGTPWN-KITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFE 303
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
E+K D TYN + + + K L+EM + G S V Y +L++ Y
Sbjct: 304 EMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLN-GFSPSIVTYNSLISAYARD 362
Query: 164 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 223
L A AEK T+ TY L+ + G + I++ +R K
Sbjct: 363 GMLDEAMELKNQMAEKG-TKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPN--- 418
Query: 224 YICILSSYLML----GHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGL 272
IC ++++ + G E+ +I D+ S DI N LL F G+
Sbjct: 419 -ICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSP-DIVTWNTLLAVFGQNGM 469
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 44/81 (54%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY +L+++++ + K+EE+ + + + + YN ++ Y ++ + + E+
Sbjct: 666 TYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEM 725
Query: 106 KRKNVVPDIFTYNLWISSCAA 126
+ +VPD+ TYN +I S AA
Sbjct: 726 RNSGIVPDVITYNTFIGSYAA 746
Score = 43.9 bits (102), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 66/168 (39%), Gaps = 2/168 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T +++ +Y + KA + + +K+ + + YN +M ++ K ++ EI
Sbjct: 631 TLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREI 690
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K + PDI +YN I + + + EM +SG D + Y + Y S
Sbjct: 691 LAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMR-NSGIVPDVITYNTFIGSYAADSM 749
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 213
A + Q TY+ ++ Y L KD+ + LR
Sbjct: 750 FEEAIGVVRYMIKHGCRPNQN-TYNSIVDGYCKLNRKDEAKLFVEDLR 796
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 53/121 (43%), Gaps = 1/121 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+ LL ++ + +F+ +K++ +N +++ Y G E+ V +
Sbjct: 456 TWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRM 515
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
V PD+ TYN +++ A +Q +K L EM D + + Y +L++ Y
Sbjct: 516 LDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEME-DGRCKPNELTYCSLLHAYANGKE 574
Query: 166 L 166
+
Sbjct: 575 I 575
>gi|414888267|tpg|DAA64281.1| TPA: hypothetical protein ZEAMMB73_921256 [Zea mays]
Length = 873
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 121/299 (40%), Gaps = 44/299 (14%)
Query: 34 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 93
F LP ++T+ +YT+L+ YA E+A L +++K + ++ A YN ++
Sbjct: 164 FHDLPAESRTALSYTSLIAAYARNALHEEARALLDQMKATGVAPTAATYNTVLAACARAT 223
Query: 94 ----QVEKVALVVEEIKR---KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGG 146
+ + + E++ +V PD+ TYN +++ A DQ + L M ++G
Sbjct: 224 DPPVPFDMLLGLFAEMRHDASPSVRPDLTTYNTLLAAAAVRSLADQSEMLLHTM-LEAGV 282
Query: 147 SDDWVKYVNLVNIYITASHLVNA-----------------------ESSTLVEAEKSITQ 183
S D V Y ++V+ + +A +L A E+ T V A
Sbjct: 283 SPDTVSYRHIVDAFASAGNLSRAAELFSEMAATGHTADASAYLGLMEAHTRVGATADAVA 342
Query: 184 --RQW---------ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYL 232
RQ TY L+ LY G D + Q+++ +R T+ Y + +
Sbjct: 343 VLRQMQADGCAPTAATYRVLLDLYGRQGRFDGVRQLFREMRTAVPPDTA-TYNVLFRVFG 401
Query: 233 MLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 291
G KEV E+ ++ D+ C ++ A GL A E + ++ PT
Sbjct: 402 DGGFFKEVVELFHDMLKTGVQP-DMVTCENVMAACGHGGLHGDAREVLEYMTREGMVPT 459
>gi|125600921|gb|EAZ40497.1| hypothetical protein OsJ_24952 [Oryza sativa Japonica Group]
Length = 766
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 77/171 (45%), Gaps = 18/171 (10%)
Query: 9 LSDSDYATRID-----------LMTKVFGIHSGERYFEGLPLSAKTSE----TYTALLHL 53
LSD Y+ RI+ + +KV + E+ F L L K A++ +
Sbjct: 527 LSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAF--LELRQKRCSLDINVLNAMVSI 584
Query: 54 YAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPD 113
Y + K E++ +K+S ++ +A YN +M +Y +G EK ++ EIK V PD
Sbjct: 585 YGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPD 644
Query: 114 IFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
++YN I + + + + EM C SG D V Y V Y++ S
Sbjct: 645 RYSYNTVIYAYGRKGQMKEASRLFSEMKC-SGLKPDVVTYNIFVKSYVSNS 694
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/249 (20%), Positives = 112/249 (44%), Gaps = 11/249 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+ +LL +Y A+ ++A E+ + +++ + + YN +++ Y+ G +E+ + +E+
Sbjct: 262 TFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEM 321
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ K + PD+ TY IS ID DEM +G + Y L+ + H
Sbjct: 322 EVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEM-VRNGCKPNLCTYNALIKM-----H 375
Query: 166 LVNAESSTLV----EAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 221
V + ++ E + +T++ L+ ++ G ++ ++K ++
Sbjct: 376 GVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPER 435
Query: 222 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 281
Y+ ++SSY G +I + ++ D+S N +L A + G E+A +
Sbjct: 436 DTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYP-DVSTYNAVLSALARGGRWEQAEKLFA 494
Query: 282 LLLQKNCAP 290
+ +++C P
Sbjct: 495 EMEERDCKP 503
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 85/200 (42%), Gaps = 8/200 (4%)
Query: 4 HKEFVLSDSDY-ATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEK 62
H E VL AT I +M + + + P + YTAL+ ++ A
Sbjct: 115 HGEGVLHHPRVLATAIRVMARAGRLAEASALLDAAP--GPDAGAYTALVSAFSRAGRFRD 172
Query: 63 AEELFERVKQSNLSFNALMYNEMMTLY--MSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
A +F R+ S + + YN ++ +Y M+V E V LV +K V PD +TYN
Sbjct: 173 AVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVAS-MKEHGVAPDRYTYNTL 231
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
IS C + + DEM SG D V + +L+++Y A A + E E+
Sbjct: 232 ISCCRRRALYKEAAQVFDEMKA-SGFEPDKVTFNSLLDVYGKARRHDEA-IEVIQEMERV 289
Query: 181 ITQRQWITYDFLIILYAGLG 200
+TY+ LI Y G
Sbjct: 290 GCPPSVVTYNSLISSYVKDG 309
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/288 (18%), Positives = 122/288 (42%), Gaps = 52/288 (18%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
+TY +L+ Y+ + A ++++R+ ++ + + YN +++ G+ E+ + E
Sbjct: 436 DTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAE 495
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
++ ++ PD ++Y+ + + A +D++K D++ + +W LV +
Sbjct: 496 MEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNW-----LVKTLV--- 547
Query: 165 HLVNAESSTLVEAEKSITQ-RQ-------------------------------------- 185
LVN++ + L EAEK+ + RQ
Sbjct: 548 -LVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAI 606
Query: 186 ---WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 242
TY+ L+ +Y+ LG+ +K + I ++ + + +Y ++ +Y G +KE
Sbjct: 607 NLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASR 666
Query: 243 IIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
+ + K S D+ N + ++ + E+A E ++ + C P
Sbjct: 667 LFSEMKCSGLKP-DVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKP 713
>gi|115473111|ref|NP_001060154.1| Os07g0590600 [Oryza sativa Japonica Group]
gi|34393454|dbj|BAC82993.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113611690|dbj|BAF22068.1| Os07g0590600 [Oryza sativa Japonica Group]
Length = 784
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 77/171 (45%), Gaps = 18/171 (10%)
Query: 9 LSDSDYATRID-----------LMTKVFGIHSGERYFEGLPLSAKTSE----TYTALLHL 53
LSD Y+ RI+ + +KV + E+ F L L K A++ +
Sbjct: 545 LSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAF--LELRQKRCSLDINVLNAMVSI 602
Query: 54 YAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPD 113
Y + K E++ +K+S ++ +A YN +M +Y +G EK ++ EIK V PD
Sbjct: 603 YGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPD 662
Query: 114 IFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
++YN I + + + + EM C SG D V Y V Y++ S
Sbjct: 663 RYSYNTVIYAYGRKGQMKEASRLFSEMKC-SGLKPDVVTYNIFVKSYVSNS 712
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/249 (20%), Positives = 112/249 (44%), Gaps = 11/249 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+ +LL +Y A+ ++A E+ + +++ + + YN +++ Y+ G +E+ + +E+
Sbjct: 280 TFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEM 339
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ K + PD+ TY IS ID DEM +G + Y L+ + H
Sbjct: 340 EVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEM-VRNGCKPNLCTYNALIKM-----H 393
Query: 166 LVNAESSTLV----EAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 221
V + ++ E + +T++ L+ ++ G ++ ++K ++
Sbjct: 394 GVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPER 453
Query: 222 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 281
Y+ ++SSY G +I + ++ D+S N +L A + G E+A +
Sbjct: 454 DTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYP-DVSTYNAVLSALARGGRWEQAEKLFA 512
Query: 282 LLLQKNCAP 290
+ +++C P
Sbjct: 513 EMEERDCKP 521
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 85/200 (42%), Gaps = 8/200 (4%)
Query: 4 HKEFVLSDSDY-ATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEK 62
H E VL AT I +M + + + P + YTAL+ ++ A
Sbjct: 133 HGEGVLHHPRVLATAIRVMARAGRLAEASALLDAAP--GPDAGAYTALVSAFSRAGRFRD 190
Query: 63 AEELFERVKQSNLSFNALMYNEMMTLY--MSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
A +F R+ S + + YN ++ +Y M+V E V LV +K V PD +TYN
Sbjct: 191 AVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVAS-MKEHGVAPDRYTYNTL 249
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
IS C + + DEM SG D V + +L+++Y A A + E E+
Sbjct: 250 ISCCRRRALYKEAAQVFDEMKA-SGFEPDKVTFNSLLDVYGKARRHDEA-IEVIQEMERV 307
Query: 181 ITQRQWITYDFLIILYAGLG 200
+TY+ LI Y G
Sbjct: 308 GCPPSVVTYNSLISSYVKDG 327
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/288 (18%), Positives = 122/288 (42%), Gaps = 52/288 (18%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
+TY +L+ Y+ + A ++++R+ ++ + + YN +++ G+ E+ + E
Sbjct: 454 DTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAE 513
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
++ ++ PD ++Y+ + + A +D++K D++ + +W LV +
Sbjct: 514 MEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNW-----LVKTLV--- 565
Query: 165 HLVNAESSTLVEAEKSITQ-RQ-------------------------------------- 185
LVN++ + L EAEK+ + RQ
Sbjct: 566 -LVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAI 624
Query: 186 ---WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 242
TY+ L+ +Y+ LG+ +K + I ++ + + +Y ++ +Y G +KE
Sbjct: 625 NLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASR 684
Query: 243 IIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
+ + K S D+ N + ++ + E+A E ++ + C P
Sbjct: 685 LFSEMKCSGLKP-DVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKP 731
>gi|168019209|ref|XP_001762137.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686541|gb|EDQ72929.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 513
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 100/249 (40%), Gaps = 5/249 (2%)
Query: 47 YTALLHLYAGAK-WTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+ L+ Y K WTE AE F +K+ +N +M Y GQ+E+ V+ E+
Sbjct: 104 FNMLMDAYGRTKQWTE-AENTFHLMKKFQCLPTETSFNVLMAAYSRGGQLERAERVLHEM 162
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K N P + TYN ++ + + + EM + G + ++NIY A H
Sbjct: 163 KESNCSPGLVTYNTYLEVLNKSGSWQLAEDVFREMQ-NRGVPPAVNTFTLMINIYGKAHH 221
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
AE K++ TY LI +A GN + ++I+ L+ Y
Sbjct: 222 SAKAE-HLFQSMRKALCPPSLFTYTALINAHAREGNCVRAEEIFAELQSVGFVPDIYTYN 280
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 285
+L +Y GH E+ + ++ +S N L+ AF GL A + + +
Sbjct: 281 ALLEAYSRGGHPAGAKEVFETMLEAGVKADHVSY-NILIDAFGRAGLISDAQAIYDSMKK 339
Query: 286 KNCAPTNAS 294
PT S
Sbjct: 340 VGFKPTMKS 348
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/294 (18%), Positives = 123/294 (41%), Gaps = 39/294 (13%)
Query: 35 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 94
G+P + T +T ++++Y A + KAE LF+ ++++ + Y ++ + G
Sbjct: 200 RGVPPAVNT---FTLMINIYGKAHHSAKAEHLFQSMRKALCPPSLFTYTALINAHAREGN 256
Query: 95 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 154
+ + E++ VPDI+TYN + + + + K+ + M ++G D V Y
Sbjct: 257 CVRAEEIFAELQSVGFVPDIYTYNALLEAYSRGGHPAGAKEVFETM-LEAGVKADHVSYN 315
Query: 155 NLVNIYITASHLVNAES---------------------STLVEAEKSITQRQWIT----- 188
L++ + A + +A++ S V+A + ++
Sbjct: 316 ILIDAFGRAGLISDAQAIYDSMKKVGFKPTMKSHILLLSAFVKAGRVTDAENFVRRLESM 375
Query: 189 --------YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 240
++ L+ Y G DK++ +++S++ + K +++ Y G+++
Sbjct: 376 GVEPDTFMFNSLLGAYGNSGRMDKMESLYESMQGSVCKPDIITLNTLINVYAQGGYIERA 435
Query: 241 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
EI + + + D+ + L+GA+S L K + +L C P A+
Sbjct: 436 EEIFNSLESKGFTP-DVMSWTSLMGAYSKRKLYRKCVSVYQKMLIAGCIPDRAT 488
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/294 (20%), Positives = 113/294 (38%), Gaps = 46/294 (15%)
Query: 34 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNE--------- 84
F+ LP T ++ L+ Y+ E+AE + +K+SN S + YN
Sbjct: 130 FQCLP----TETSFNVLMAAYSRGGQLERAERVLHEMKESNCSPGLVTYNTYLEVLNKSG 185
Query: 85 --------------------------MMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYN 118
M+ +Y K + + +++ P +FTY
Sbjct: 186 SWQLAEDVFREMQNRGVPPAVNTFTLMINIYGKAHHSAKAEHLFQSMRKALCPPSLFTYT 245
Query: 119 LWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES--STLVE 176
I++ A N + ++ E+ G D Y L+ Y H A+ T++E
Sbjct: 246 ALINAHAREGNCVRAEEIFAELQ-SVGFVPDIYTYNALLEAYSRGGHPAGAKEVFETMLE 304
Query: 177 AEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGH 236
A + ++Y+ LI + G I+ S++ K T +++I +LS+++ G
Sbjct: 305 AG---VKADHVSYNILIDAFGRAGLISDAQAIYDSMKKVGFKPTMKSHILLLSAFVKAGR 361
Query: 237 LKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
+ + + + +S + D N LLGA+ + G +K + + C P
Sbjct: 362 VTDAENFVRRL-ESMGVEPDTFMFNSLLGAYGNSGRMDKMESLYESMQGSVCKP 414
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T L+++YA + E+AEE+F ++ + + + + +M Y K V +++
Sbjct: 418 TLNTLINVYAQGGYIERAEEIFNSLESKGFTPDVMSWTSLMGAYSKRKLYRKCVSVYQKM 477
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLD 138
+PD T + +SSC +QVK+ D
Sbjct: 478 LIAGCIPDRATAKVLLSSCRGP---EQVKEVTD 507
>gi|449487793|ref|XP_004157803.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Cucumis sativus]
Length = 864
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 113/247 (45%), Gaps = 6/247 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV--EKVALVVE 103
+YTAL++ Y E + EL ER+K+ +S N L YN ++ + G + E + +
Sbjct: 185 SYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINA-CARGDLDWEGLLGLFA 243
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
E++ + V PD+ TYN +S+CAA D+ + M + G + Y +V +
Sbjct: 244 EMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTM-IEGGIVPEITTYSYIVETFGKL 302
Query: 164 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 223
L + L E E +Y+ LI +A LG+ + ++K ++ +
Sbjct: 303 GKLEKV-AMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNAST 361
Query: 224 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 283
Y +L+ Y G +V E+ Q K+S +++ D + N L+ F + G ++ L
Sbjct: 362 YSILLNLYGKHGRYDDVRELFLQMKES-SAEPDATTYNILIRVFGEGGYFKEVVTLFHDL 420
Query: 284 LQKNCAP 290
+ +N P
Sbjct: 421 VDENIDP 427
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 104/245 (42%), Gaps = 4/245 (1%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
YT ++ L EK E+F+ + + + Y ++ Y GQ E ++E +K
Sbjct: 151 YTIIISLLGREGLLEKCSEIFDEMASQGVIRSVFSYTALINAYGRNGQYETSLELLERMK 210
Query: 107 RKNVVPDIFTYNLWISSCA-ATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
R+ V P+I TYN I++CA L+ + + EM + G D V Y L++
Sbjct: 211 RERVSPNILTYNTVINACARGDLDWEGLLGLFAEMRHE-GVQPDLVTYNTLLSACAARGL 269
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
AE E I + TY +++ + LG +K+ + K + +Y
Sbjct: 270 GDEAEMVFKTMIEGGIVP-EITTYSYIVETFGKLGKLEKVAMLLKEMESEGYLPDISSYN 328
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 285
++ ++ LG +KE ++ Q Q+A + S + LL + G + E + + +
Sbjct: 329 VLIEAHAKLGSIKEAMDVFKQM-QAAGCVPNASTYSILLNLYGKHGRYDDVRELFLQMKE 387
Query: 286 KNCAP 290
+ P
Sbjct: 388 SSAEP 392
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 116/273 (42%), Gaps = 13/273 (4%)
Query: 12 SDYATRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFER 69
S Y I+ K+ I F+ + + + TY+ LL+LY + ELF +
Sbjct: 325 SSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYSILLNLYGKHGRYDDVRELFLQ 384
Query: 70 VKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLN 129
+K+S+ +A YN ++ ++ G ++V + ++ +N+ P++ TY + +C
Sbjct: 385 MKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVDENIDPNMETYEGLVFACGKGGL 444
Query: 130 IDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS----HLVNAESSTLVEAEKSITQRQ 185
+ KK L M+ G Y L+ Y A+ LV + V ++ +I
Sbjct: 445 HEDAKKILFHMN-GKGIVPSSKAYSGLIEAYGQAALYDEALVAFNTMNEVGSKSTID--- 500
Query: 186 WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIID 245
TY+ LI +A G + + I +R ++++ I+ Y G +E +
Sbjct: 501 --TYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGIIEGYRQSGQYEEAIKAFV 558
Query: 246 QWKQSATSDFDISACNRLLGAFSDVGLTEKANE 278
+ ++ + D +LG + GL +++ E
Sbjct: 559 EMEK-MRCELDEQTLEGVLGVYCFAGLVDESKE 590
Score = 40.4 bits (93), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 44/217 (20%), Positives = 93/217 (42%), Gaps = 3/217 (1%)
Query: 78 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFL 137
N +Y +++L G +EK + + +E+ + V+ +F+Y I++ + + L
Sbjct: 147 NEHIYTIIISLLGREGLLEKCSEIFDEMASQGVIRSVFSYTALINAYGRNGQYETSLELL 206
Query: 138 DEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYA 197
+ M + S + + Y ++N E Q +TY+ L+ A
Sbjct: 207 ERMKRER-VSPNILTYNTVINACARGDLDWEGLLGLFAEMRHEGVQPDLVTYNTLLSACA 265
Query: 198 GLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDI 257
G D+ + ++K++ Y I+ ++ LG L++V ++ + + DI
Sbjct: 266 ARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFGKLGKLEKVAMLLKEMESEGYLP-DI 324
Query: 258 SACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
S+ N L+ A + +G ++A + + C P NAS
Sbjct: 325 SSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVP-NAS 360
>gi|357153691|ref|XP_003576535.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
chloroplastic-like [Brachypodium distachyon]
Length = 936
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 62/122 (50%), Gaps = 4/122 (3%)
Query: 36 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 95
G P+S E Y +L+ Y A E+ + ++++++ F+ YN M+ +Y G +
Sbjct: 788 GFPVSL---EAYNCMLNAYGKAGQLEEFAAVLQKMRRAKCDFDHYTYNIMLNIYGRKGWI 844
Query: 96 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 155
E VA V+ E+K + V PD+++YN I + + K + EM G + D + Y N
Sbjct: 845 EGVAYVLSELKSRGVEPDLYSYNTLIKAYGIAGMPEDAVKLMQEMRL-KGINADRITYTN 903
Query: 156 LV 157
L+
Sbjct: 904 LI 905
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 105/247 (42%), Gaps = 11/247 (4%)
Query: 35 EGLPLSAKTSE------TYTALLHLYAGAKWTEKAEELFERV-KQSNLSFNALMYNEMMT 87
E L L KTS Y+ ++ +Y A E A + E + KQ + + ++ +M+
Sbjct: 603 ETLYLELKTSACVLDMIAYSVIVRMYTKAGRPEDACSVLEDMEKQKEIVPDKYLFLDMLR 662
Query: 88 LYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGS 147
Y G +EK+ I + V D N I+ C + +D++ + DEM G
Sbjct: 663 TYQKCGLLEKLTDTYYWILKSQVECDEAMNNCIINCCGPAIPVDELTRIFDEM-IQLGHM 721
Query: 148 DDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQ 207
+ L++IY A L N A K Q I+Y+ +I YA G+ +
Sbjct: 722 ASTITLNVLLDIYGKAG-LFNRAQKVFNMARKQ-GQADIISYNTIIAAYAHSGDFRSMTY 779
Query: 208 IWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAF 267
+ ++ ++ Y C+L++Y G L+E ++ + ++ A DFD N +L +
Sbjct: 780 FVQKMQDAGFPVSLEAYNCMLNAYGKAGQLEEFAAVLQKMRR-AKCDFDHYTYNIMLNIY 838
Query: 268 SDVGLTE 274
G E
Sbjct: 839 GRKGWIE 845
Score = 37.4 bits (85), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 52/119 (43%), Gaps = 1/119 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+Y ++ YA + ++++ + + YN M+ Y GQ+E+ A V++++
Sbjct: 760 SYNTIIAAYAHSGDFRSMTYFVQKMQDAGFPVSLEAYNCMLNAYGKAGQLEEFAAVLQKM 819
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+R D +TYN+ ++ I+ V L E+ G D Y L+ Y A
Sbjct: 820 RRAKCDFDHYTYNIMLNIYGRKGWIEGVAYVLSELK-SRGVEPDLYSYNTLIKAYGIAG 877
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 120/285 (42%), Gaps = 8/285 (2%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVK 71
Y T I + K +H G E + + + T+ ++ + A ELF ++
Sbjct: 398 YNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQ 457
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK-NVVPDIFTYNLWISSCAATLNI 130
+S + N + YN ++ + ++ ++ E+ RK PDI TYN I + +
Sbjct: 458 ESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRV 517
Query: 131 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 190
D+ K +M D DD V Y ++V + ++ ++ L K+ ITY
Sbjct: 518 DRAYKLFLQMLSDGLAPDD-VTY-SIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYG 575
Query: 191 FLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYL-MLGHLKEVGEIIDQWKQ 249
LI + GN DK +I + L ++K I +L G L++ GE+++ +
Sbjct: 576 TLIDGFCKTGNLDKALEILQ-LLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLR 634
Query: 250 SATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
+ D N LL F D TE A + ++ Q C P NA+
Sbjct: 635 AGLVP-DTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNAT 678
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 107/250 (42%), Gaps = 12/250 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY +LL ++ E+A +L + Q N + YN ++ +V + L++E++
Sbjct: 362 TYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQM 421
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
N VPDI T+N I + T +D + + + +SG + + V Y +LV+ +
Sbjct: 422 LSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQ-ESGCTPNLVTYNSLVHGLCKSRR 480
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK-SLRMTKQKMTSRN- 223
AE K ITY+ +I GL ++D+ +K L+M + +
Sbjct: 481 FDQAEYLLREMTRKQGCSPDIITYNTVI---DGLCKSKRVDRAYKLFLQMLSDGLAPDDV 537
Query: 224 -YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC--NRLLGAFSDVGLTEKANEFH 280
Y ++SS + E +++ ++ FD A L+ F G +KA E
Sbjct: 538 TYSIVISSLCKWRFMDEANNVLELMLKNG---FDPGAITYGTLIDGFCKTGNLDKALEIL 594
Query: 281 MLLLQKNCAP 290
LLL K P
Sbjct: 595 QLLLSKGSYP 604
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 106/250 (42%), Gaps = 4/250 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L+ + + A EL ++ + NA+ YN +M S +++ + +E+
Sbjct: 151 TYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEM 210
Query: 106 KRK-NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+ + PD+FTY+ + S + +D + ++ M G S + V Y +L++ A
Sbjct: 211 EESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMV-SKGCSPNVVTYSSLLHGLCKAG 269
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
L A ++ L +S +TY+ +I + LG D+ + + + + Y
Sbjct: 270 KLDEA-TALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTY 328
Query: 225 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 284
+L ++ G ++ +++ + ++ N LL F E+A + ++
Sbjct: 329 TVLLDAFCKCGKAEDAIGLVEVMVEKGYVP-NLFTYNSLLDMFCKKDEVERACQLLSSMI 387
Query: 285 QKNCAPTNAS 294
QK C P S
Sbjct: 388 QKGCVPNVVS 397
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 110/276 (39%), Gaps = 16/276 (5%)
Query: 26 GIHSGERYFEGLPLSAKTSE---------TYTALLHLYAGAKWTEKAEELFERVKQSNLS 76
G+ SG + L L + E TY+ ++ + + A L E + S
Sbjct: 193 GLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCS 252
Query: 77 FNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKF 136
N + Y+ ++ G++++ +++ + R P+I TYN I ID+
Sbjct: 253 PNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHL 312
Query: 137 LDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILY 196
L+EM D G + V Y L++ + +A V EK + TY+ L+ ++
Sbjct: 313 LEEMV-DGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLF-TYNSLLDMF 370
Query: 197 AGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDF- 255
KD++++ + L QK N + + L +V E + +Q +++
Sbjct: 371 C---KKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCV 427
Query: 256 -DISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
DI N ++ A + A E L+ + C P
Sbjct: 428 PDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTP 463
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/255 (19%), Positives = 107/255 (41%), Gaps = 18/255 (7%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
S TY +++ + + + A L E + + + N YN ++ + +VE ++E
Sbjct: 44 SVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLE 103
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
++ + PD+ +Y I+ +D+ + +D+M G + + Y LV+ +
Sbjct: 104 QMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMI-QRGCQPNVITYGTLVDGFCRV 162
Query: 164 SHLVNAESSTLVEAEKSITQRQW----ITYDFLIILYAGLGNKDKID---QIWKSLRMTK 216
L A VE + +T+R + ITY+ ++ GL + K+D Q++K + +
Sbjct: 163 GDLDGA-----VELVRKMTERGYRPNAITYNNIM---HGLCSGRKLDSALQLFKEMEESG 214
Query: 217 QKMTSR-NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEK 275
Y I+ S + G + + +++ S ++ + LL G ++
Sbjct: 215 SCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSP-NVVTYSSLLHGLCKAGKLDE 273
Query: 276 ANEFHMLLLQKNCAP 290
A + + C+P
Sbjct: 274 ATALLQRMTRSGCSP 288
>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
Length = 716
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 89/200 (44%), Gaps = 7/200 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
YT L+ A A+ E+A EL ++++ ++ ++ GQV +V+E+
Sbjct: 47 AYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEV 106
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K + PDI YN+ I N+D KF E+ DD V Y +++ + A
Sbjct: 107 KGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDD-VSYTSMIWVLCKAGR 165
Query: 166 LVNAES-STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
L AE +EAE+S+ Y+ +I+ G G+ + + +K L +++ +
Sbjct: 166 LGEAEELFAQMEAERSVP--CAYAYNTMIM---GYGSAGRFEDAYKLLERLRERGCIPSV 220
Query: 225 ICILSSYLMLGHLKEVGEII 244
+ S LG ++V E +
Sbjct: 221 VSFNSILTCLGKKRKVDEAL 240
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 66/144 (45%), Gaps = 5/144 (3%)
Query: 4 HKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTE 61
+ F L Y +D K +H E + T TY A++ A +
Sbjct: 457 QQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLD 516
Query: 62 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 121
+A LFE K + N ++Y+ ++ + VG++++ L++EE+ +K + P+++T+N +
Sbjct: 517 EAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLL 576
Query: 122 SSCAATLNIDQVK---KFLDEMSC 142
+ I++ + + EM C
Sbjct: 577 DALVKAEEINEALVCFQSMKEMKC 600
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 93/233 (39%), Gaps = 41/233 (17%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVK 71
Y ID K + ++F L + +YT+++ + A +AEELF +++
Sbjct: 118 YNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQME 177
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
A YN M+ Y S G+ E ++E ++ + +P + ++N ++ +D
Sbjct: 178 AERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVD 237
Query: 132 QVKKFLD-----------------EMSCDSGGSDDWVK----------YVNLVNIYITAS 164
+ + +M C G ++ + + NL+ + I
Sbjct: 238 EALSLFEVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVD 297
Query: 165 HLVNAESSTLVEAEK---SITQR----QWITYDFLIILYAGLGNKDKIDQIWK 210
L A L EA K S +QR +TY LI GLG K ++D+ ++
Sbjct: 298 RLCKARK--LEEAYKIFESASQRGCNPDCVTYCSLI---DGLGKKGQVDEAYR 345
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 54/126 (42%), Gaps = 2/126 (1%)
Query: 16 TRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVKQS 73
T +D + K + G FE + +Y+ L+H A + +F +KQ
Sbjct: 399 TYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQ 458
Query: 74 NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQV 133
+ +A YN ++ + G+V K ++EE+K K V P + TY + A +D+
Sbjct: 459 GFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEA 518
Query: 134 KKFLDE 139
+E
Sbjct: 519 YMLFEE 524
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 51/255 (20%), Positives = 99/255 (38%), Gaps = 11/255 (4%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
S TY ++ + E+A + + ++ ++L N L N M+ ++E+ + E
Sbjct: 254 SSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFE 313
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
++ PD TY I +D+ + ++M D+G + + V Y +L+
Sbjct: 314 SASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKM-LDAGHNANPVVYTSLIR----- 367
Query: 164 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGL----GNKDKIDQIWKSLRMTKQKM 219
+ ++ + K + +R L+ Y G +K I++ +R
Sbjct: 368 NFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLP 427
Query: 220 TSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 279
R+Y ++ G +E I KQ + D A N ++ F G KA E
Sbjct: 428 DVRSYSILIHGLTKAGQARETSNIFHAMKQQGFA-LDARAYNAVVDGFCKSGKVHKAYEI 486
Query: 280 HMLLLQKNCAPTNAS 294
+ +K PT A+
Sbjct: 487 LEEMKEKCVQPTVAT 501
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 46/238 (19%), Positives = 95/238 (39%), Gaps = 10/238 (4%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSET--YTALLHLYAGAKWTEKAEELFERVK 71
Y + ID + K + R FE + + + YT+L+ + E ++F+ +
Sbjct: 327 YCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELI 386
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
+ + + N M G+VEK ++ E+I+ +PD+ +Y++ I
Sbjct: 387 RRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQAR 446
Query: 132 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 191
+ M G + D Y +V+ + + V+ L E ++ Q TY
Sbjct: 447 ETSNIFHAMK-QQGFALDARAYNAVVDGFCKSGK-VHKAYEILEEMKEKCVQPTVATYGA 504
Query: 192 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN---YICILSSYLMLGHLKEVGEIIDQ 246
++ GL D++D+ + K K N Y ++ + +G + E I+++
Sbjct: 505 IV---DGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEE 559
Score = 37.4 bits (85), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 72/179 (40%), Gaps = 3/179 (1%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYT--ALLHLYAGAKWTEKAEELFERVK 71
Y++ ID KV I E + T YT +LL A+ +A F+ +K
Sbjct: 537 YSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMK 596
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
+ N Y+ ++ V + K + ++++++ +VP++ TY IS A NI
Sbjct: 597 EMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNIT 656
Query: 132 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 190
+ + GG D + L+ A+ + A +T+ + S ++ D
Sbjct: 657 DAYSLFERFKAN-GGIPDAASFNALIEGMSNANRAMEAYQTTVYQLSSSSCSWNFLVPD 714
>gi|414888268|tpg|DAA64282.1| TPA: hypothetical protein ZEAMMB73_921256 [Zea mays]
Length = 868
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 121/299 (40%), Gaps = 44/299 (14%)
Query: 34 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 93
F LP ++T+ +YT+L+ YA E+A L +++K + ++ A YN ++
Sbjct: 164 FHDLPAESRTALSYTSLIAAYARNALHEEARALLDQMKATGVAPTAATYNTVLAACARAT 223
Query: 94 ----QVEKVALVVEEIKR---KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGG 146
+ + + E++ +V PD+ TYN +++ A DQ + L M ++G
Sbjct: 224 DPPVPFDMLLGLFAEMRHDASPSVRPDLTTYNTLLAAAAVRSLADQSEMLLHTM-LEAGV 282
Query: 147 SDDWVKYVNLVNIYITASHLVNA-----------------------ESSTLVEAEKSITQ 183
S D V Y ++V+ + +A +L A E+ T V A
Sbjct: 283 SPDTVSYRHIVDAFASAGNLSRAAELFSEMAATGHTADASAYLGLMEAHTRVGATADAVA 342
Query: 184 --RQW---------ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYL 232
RQ TY L+ LY G D + Q+++ +R T+ Y + +
Sbjct: 343 VLRQMQADGCAPTAATYRVLLDLYGRQGRFDGVRQLFREMRTAVPPDTA-TYNVLFRVFG 401
Query: 233 MLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 291
G KEV E+ ++ D+ C ++ A GL A E + ++ PT
Sbjct: 402 DGGFFKEVVELFHDMLKTGVQP-DMVTCENVMAACGHGGLHGDAREVLEYMTREGMVPT 459
>gi|449469490|ref|XP_004152453.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Cucumis sativus]
Length = 864
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 113/247 (45%), Gaps = 6/247 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV--EKVALVVE 103
+YTAL++ Y E + EL ER+K+ +S N L YN ++ + G + E + +
Sbjct: 185 SYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINA-CARGDLDWEGLLGLFA 243
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
E++ + V PD+ TYN +S+CAA D+ + M + G + Y +V +
Sbjct: 244 EMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTM-IEGGIVPEITTYSYIVETFGKL 302
Query: 164 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 223
L + L E E +Y+ LI +A LG+ + ++K ++ +
Sbjct: 303 GKLEKV-AMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNAST 361
Query: 224 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 283
Y +L+ Y G +V E+ Q K+S +++ D + N L+ F + G ++ L
Sbjct: 362 YSILLNLYGKHGRYDDVRELFLQMKES-SAEPDATTYNILIRVFGEGGYFKEVVTLFHDL 420
Query: 284 LQKNCAP 290
+ +N P
Sbjct: 421 VDENIDP 427
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 104/245 (42%), Gaps = 4/245 (1%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
YT ++ L EK E+F+ + + + Y ++ Y GQ E ++E +K
Sbjct: 151 YTIIISLLGREGLLEKCSEIFDEMASQGVIRSVFSYTALINAYGRNGQYETSLELLERMK 210
Query: 107 RKNVVPDIFTYNLWISSCA-ATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
R+ V P+I TYN I++CA L+ + + EM + G D V Y L++
Sbjct: 211 RERVSPNILTYNTVINACARGDLDWEGLLGLFAEMRHE-GVQPDLVTYNTLLSACAARGL 269
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
AE E I + TY +++ + LG +K+ + K + +Y
Sbjct: 270 GDEAEMVFKTMIEGGIVP-EITTYSYIVETFGKLGKLEKVAMLLKEMESEGYLPDISSYN 328
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 285
++ ++ LG +KE ++ Q Q+A + S + LL + G + E + + +
Sbjct: 329 VLIEAHAKLGSIKEAMDVFKQM-QAAGCVPNASTYSILLNLYGKHGRYDDVRELFLQMKE 387
Query: 286 KNCAP 290
+ P
Sbjct: 388 SSAEP 392
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 116/273 (42%), Gaps = 13/273 (4%)
Query: 12 SDYATRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFER 69
S Y I+ K+ I F+ + + + TY+ LL+LY + ELF +
Sbjct: 325 SSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYSILLNLYGKHGRYDDVRELFLQ 384
Query: 70 VKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLN 129
+K+S+ +A YN ++ ++ G ++V + ++ +N+ P++ TY + +C
Sbjct: 385 MKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVDENIDPNMETYEGLVFACGKGGL 444
Query: 130 IDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS----HLVNAESSTLVEAEKSITQRQ 185
+ KK L M+ G Y L+ Y A+ LV + V ++ +I
Sbjct: 445 HEDAKKILFHMN-GKGIVPSSKAYSGLIEAYGQAALYDEALVAFNTMNEVGSKSTID--- 500
Query: 186 WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIID 245
TY+ LI +A G + + I +R ++++ I+ Y G +E +
Sbjct: 501 --TYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGIIEGYRQSGQYEEAIKAFV 558
Query: 246 QWKQSATSDFDISACNRLLGAFSDVGLTEKANE 278
+ ++ + D +LG + GL +++ E
Sbjct: 559 EMEK-MRCELDEQTLEGVLGVYCFAGLVDESKE 590
Score = 40.4 bits (93), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 44/217 (20%), Positives = 93/217 (42%), Gaps = 3/217 (1%)
Query: 78 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFL 137
N +Y +++L G +EK + + +E+ + V+ +F+Y I++ + + L
Sbjct: 147 NEHIYTIIISLLGREGLLEKCSEIFDEMASQGVIRSVFSYTALINAYGRNGQYETSLELL 206
Query: 138 DEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYA 197
+ M + S + + Y ++N E Q +TY+ L+ A
Sbjct: 207 ERMKRER-VSPNILTYNTVINACARGDLDWEGLLGLFAEMRHEGVQPDLVTYNTLLSACA 265
Query: 198 GLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDI 257
G D+ + ++K++ Y I+ ++ LG L++V ++ + + DI
Sbjct: 266 ARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFGKLGKLEKVAMLLKEMESEGYLP-DI 324
Query: 258 SACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
S+ N L+ A + +G ++A + + C P NAS
Sbjct: 325 SSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVP-NAS 360
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/258 (20%), Positives = 108/258 (41%), Gaps = 11/258 (4%)
Query: 27 IHSGERYFEGLPLS---AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYN 83
+ S R+F+ + LS A TY L+ G ++A + ++ + NA+ YN
Sbjct: 138 LPSARRFFDSM-LSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYN 196
Query: 84 EMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCD 143
++ + G+V++ +V+ ++ + P++ T+N ++ ++ +K DEM
Sbjct: 197 TLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMV-K 255
Query: 144 SGGSDDWVKYVNLVNIY--ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 201
G + D V Y LV Y + SH S E + +T+ LI + GN
Sbjct: 256 EGLAPDGVSYNTLVGGYCKVGCSH---EALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGN 312
Query: 202 KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 261
++ + + +R +M + ++ + G L + + + +Q + N
Sbjct: 313 LERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQP-SVVCYN 371
Query: 262 RLLGAFSDVGLTEKANEF 279
L+ + VG ++A E
Sbjct: 372 ALINGYCMVGRMDEAREL 389
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 55/115 (47%), Gaps = 1/115 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+T+L+H+ A E+A L +++ L N + + ++ + G ++ L V E+
Sbjct: 299 TFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREM 358
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
++ + P + YN I+ +D+ ++ + EM G D V Y +++ Y
Sbjct: 359 RQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEA-KGVKPDVVTYSTILSAY 412
>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 915
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 112/273 (41%), Gaps = 37/273 (13%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT+++ +K E+A +LF+ ++Q ++ N +MY ++ Y G+V++ L++E++
Sbjct: 499 TYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKM 558
Query: 106 KRKNVVPDIFTYNLWISS-CA--------------------ATLNIDQ--VKKFLDEMSC 142
KN +P+ T+N I CA T++ D + + L +
Sbjct: 559 LSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDF 618
Query: 143 D-----------SGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 191
D SG D Y + Y L++AE E ++ TY
Sbjct: 619 DHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSP-DLFTYSS 677
Query: 192 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 251
LI Y LG + + K +R T + + ++ ++ L + + K+ G + S
Sbjct: 678 LIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSN 737
Query: 252 TSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 284
+FD LL + +T A + L+L
Sbjct: 738 MMEFDTVV--ELLEKMVEHSVTPNAKSYEKLIL 768
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 96/244 (39%), Gaps = 3/244 (1%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y LL+ A ++ ++++ + + + N YN+M+ Y +G VE+ V +I
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
+ PD FTY I ++D K +EM G + V Y +L++ A +
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPL-KGCRRNEVAYTHLIHGLCVARRI 304
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 226
A V+ + TY LI G K + + K + T K Y
Sbjct: 305 DEA-MDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTV 363
Query: 227 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 286
++ S ++ E++ Q + ++ N L+ + G+ E A + L+ +
Sbjct: 364 LIDSLCSQCKFEKARELLGQMLEKGLMP-NVITYNALINGYCKRGMIEDAVDVVELMESR 422
Query: 287 NCAP 290
+P
Sbjct: 423 KLSP 426
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 100/250 (40%), Gaps = 45/250 (18%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT L+ EKA EL ++ + L N + YN ++ Y G +E VVE +
Sbjct: 360 TYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELM 419
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ + + P+ TYN I + N+ + L++M + D V Y +L++ + +
Sbjct: 420 ESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKM-LERKVLPDVVTYNSLIDGQCRSGN 477
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+A + ++ + QW TY + ID + KS R
Sbjct: 478 FDSAYRLLSLMNDRGLVPDQW-TYTSM------------IDSLCKSKR------------ 512
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL-- 283
++E ++ D +Q + ++ L+ + G K +E H++L
Sbjct: 513 -----------VEEACDLFDSLEQKGVNP-NVVMYTALIDGYCKAG---KVDEAHLMLEK 557
Query: 284 -LQKNCAPTN 292
L KNC P +
Sbjct: 558 MLSKNCLPNS 567
>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/249 (19%), Positives = 112/249 (44%), Gaps = 3/249 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
++++L+ +++ + ++A F +K+ L + ++Y +M Y G + + + +E+
Sbjct: 260 SFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEM 319
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ V D+ YN ++ + K DEM + G D+ + L++ + +
Sbjct: 320 LEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEM-VERGALPDFYTFTTLIHGHCQDGN 378
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ A S +++I + + Y+ LI + +G +K ++W + K Y
Sbjct: 379 MTKALSLFGTMTQRNI-KPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYG 437
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 285
++++Y +GH+ E + D + + CN ++ + G + KA+EF ++
Sbjct: 438 ILINAYCSVGHVSEAFRLWDVMIEKGIKP-TLVTCNTVIKGYCRSGDSSKADEFLGRMIA 496
Query: 286 KNCAPTNAS 294
K AP + S
Sbjct: 497 KGVAPDHIS 505
Score = 43.5 bits (101), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 50/249 (20%), Positives = 108/249 (43%), Gaps = 11/249 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+T L+H + KA LF + Q N+ + + YN ++ + VG++EK + + + +
Sbjct: 365 TFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGM 424
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ + P+ TY + I++ + ++ + + D M + G V ++ Y +
Sbjct: 425 ISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVM-IEKGIKPTLVTCNTVIKGYCRSGD 483
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQ--IWKSLRMTKQKMTSR- 222
A+ K + I+Y+ LI G +D +D+ +W + +M K+ +
Sbjct: 484 SSKADEFLGRMIAKGVAPDH-ISYNTLI---NGFVREDNMDKAFLWIN-KMEKEGLLPDI 538
Query: 223 -NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 281
Y +++ + G ++E ++ + + + D S L+ +A FH
Sbjct: 539 ITYNVVMNGFCRQGRMQEAELVLRKMIEKGINP-DRSTYTALINGHVTQDNLNEAFRFHD 597
Query: 282 LLLQKNCAP 290
+LQ+ AP
Sbjct: 598 EMLQRGFAP 606
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 50/104 (48%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+Y L++ + +KA ++++ L + + YN +M + G++++ LV+ ++
Sbjct: 505 SYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKM 564
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDD 149
K + PD TY I+ N+++ +F DEM DD
Sbjct: 565 IEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPDD 608
Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 52/125 (41%), Gaps = 3/125 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L+ Y E+A E+ + L + YN ++ G+ + ++ E+
Sbjct: 155 TYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEM 214
Query: 106 KRKNVVPDIFTYN-LWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+ PD TYN L + SC N + K+ EM G D V + +L+ ++
Sbjct: 215 LNIGLSPDTTTYNTLLVESCRRD-NFSEAKEIFGEM-LRQGVVPDLVSFSSLIAVFSRNR 272
Query: 165 HLVNA 169
HL A
Sbjct: 273 HLDQA 277
>gi|224136033|ref|XP_002327364.1| predicted protein [Populus trichocarpa]
gi|222835734|gb|EEE74169.1| predicted protein [Populus trichocarpa]
Length = 662
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 93/204 (45%), Gaps = 11/204 (5%)
Query: 49 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 108
++L A T +A +L ++ + +S + +MYN + + + Q+ + + E++K+
Sbjct: 423 SMLECLCSAGKTTEAIDLLGKIHEKGVSVDTVMYNTVFSALGKLKQISPLHDLYEKMKQD 482
Query: 109 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVN 168
+PD FTYN+ ISS +D+ K +E+ DS D Y +L+N HL
Sbjct: 483 GPLPDTFTYNILISSFGRAGKVDEAIKIFEELE-DSDYKPDTCSYNSLINCLGKNGHLDE 541
Query: 169 AESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICIL 228
A EK + +TY LI + K D++ + R+ + + Y I+
Sbjct: 542 AHMKFKEMCEKGLNP-DVVTYSTLIECFG------KTDKVEMACRLFDEMLAEGCYPNIV 594
Query: 229 SSYLMLGHLKEVG---EIIDQWKQ 249
+ ++L L+ G E +D + +
Sbjct: 595 TYNILLDCLERSGRTAEAVDLYAK 618
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 101/235 (42%), Gaps = 8/235 (3%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 102
T TY L+ Y ++ TEK ++ +K+ + +N ++ + +V+ V
Sbjct: 210 TGYTYKCLVQAYLRSRNTEKGFAVYLEMKKKGHMLDIFAFNMLLDALVKDSEVDHAYKVF 269
Query: 103 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 162
E++KRK+ PD +TY + I D+ + +EM + G S + + Y ++
Sbjct: 270 EDMKRKHCEPDEYTYTIMIRMTGKIGKPDESLELFEEM-LNKGYSPNVIAYNTMIQALAN 328
Query: 163 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 222
A + A L EK ++ TY ++ L A K+D++ + ++K+ M+
Sbjct: 329 ARMVDKAILLFLKMVEKECRPSEF-TYSVILHLLATERKLHKLDEV---VEVSKKYMSRS 384
Query: 223 NYICILSSYLMLGHLKEVGEII-DQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
Y ++ + LGH E + + W D D AC +L G T +A
Sbjct: 385 IYAYLVRTLKKLGHASEAHRLFCNMWNCHERGDRD--ACVSMLECLCSAGKTTEA 437
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 52/114 (45%), Gaps = 1/114 (0%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y + K +L+E++KQ + YN +++ + G+V++ + EE++
Sbjct: 456 YNTVFSALGKLKQISPLHDLYEKMKQDGPLPDTFTYNILISSFGRAGKVDEAIKIFEELE 515
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
+ PD +YN I+ ++D+ EM C+ G + D V Y L+ +
Sbjct: 516 DSDYKPDTCSYNSLINCLGKNGHLDEAHMKFKEM-CEKGLNPDVVTYSTLIECF 568
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 46/95 (48%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L+ + A ++A ++FE ++ S+ + YN ++ G +++ + +E+
Sbjct: 490 TYNILISSFGRAGKVDEAIKIFEELEDSDYKPDTCSYNSLINCLGKNGHLDEAHMKFKEM 549
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
K + PD+ TY+ I T ++ + DEM
Sbjct: 550 CEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEM 584
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 91/192 (47%), Gaps = 2/192 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+ ++++ A E A ++F+ + + L+ + + YN +++ Y VG + + V E+
Sbjct: 83 TFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEM 142
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
++ +VPD+ T+ I + N++Q + +M + G + V + L++ +
Sbjct: 143 TQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMR-ERGLRMNEVTFTALIDGFCKKGF 201
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
L +A + + E K Q + Y+ LI Y LG D ++ + + + K Y
Sbjct: 202 LDDALLA-VEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYS 260
Query: 226 CILSSYLMLGHL 237
I+S Y +G+L
Sbjct: 261 TIISGYCKVGNL 272
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/251 (19%), Positives = 106/251 (42%), Gaps = 4/251 (1%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQ-SNLSFNALMYNEMMTLYMSVGQVEKVA 99
A + TY L+ + A + AE + +++ N N + +N M+ G++E
Sbjct: 42 APNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGAR 101
Query: 100 LVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 159
V +E+ R+ + PD+ +YN +S + + EM+ G D V + +L++
Sbjct: 102 KVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMT-QRGLVPDVVTFTSLIHA 160
Query: 160 YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 219
A +L A + E+ + + +T+ LI + G D + +R +
Sbjct: 161 TCKAGNLEQAVALVAQMRERGLRMNE-VTFTALIDGFCKKGFLDDALLAVEEMRKCGIQP 219
Query: 220 TSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 279
+ Y +++ Y LG + E+I + + D+ + ++ + VG + A +
Sbjct: 220 SVVCYNALINGYCKLGRMDLARELIREMEAKRVKP-DVVTYSTIISGYCKVGNLDSAFQL 278
Query: 280 HMLLLQKNCAP 290
+ +L+K P
Sbjct: 279 NQKMLKKGVLP 289
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/239 (19%), Positives = 99/239 (41%), Gaps = 12/239 (5%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L+ E+A + ++ + + NA+ YN ++ + G+++ VV +
Sbjct: 12 TYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLM 71
Query: 106 KRK-NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+ + N P++ T+N ++ ++ +K DEM G + D V Y L++ Y
Sbjct: 72 REEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMV-REGLAPDVVSYNTLLSGYCKVG 130
Query: 165 HLVNAESSTLVEAEKSITQRQW----ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 220
L S V +E +TQR +T+ LI GN ++ + +R +M
Sbjct: 131 CL---HESLAVFSE--MTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMN 185
Query: 221 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 279
+ ++ + G L + +++ ++ + N L+ + +G + A E
Sbjct: 186 EVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQP-SVVCYNALINGYCKLGRMDLAREL 243
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY++L+ K A ELFE + Q + + Y ++ + G VEK + +E+
Sbjct: 293 TYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEM 352
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFL 137
RK V+PD+ TY++ I+ + + + + L
Sbjct: 353 IRKGVLPDVVTYSVLINGLSKSARTKEAHRLL 384
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 28/145 (19%), Positives = 61/145 (42%), Gaps = 1/145 (0%)
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
R V P+++TYN+ + + A +++ + +M +G + + V Y LV + A L
Sbjct: 3 RHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMR-GAGCAPNAVTYNTLVAAFCRAGEL 61
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 226
AE + E+ + +T++ ++ G + +++ + +Y
Sbjct: 62 DGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNT 121
Query: 227 ILSSYLMLGHLKEVGEIIDQWKQSA 251
+LS Y +G L E + + Q
Sbjct: 122 LLSGYCKVGCLHESLAVFSEMTQRG 146
>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 528
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 77/173 (44%), Gaps = 5/173 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L++ A ++A F+ + + L+ N YN +M + VGQ++ + E+
Sbjct: 137 TYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEM 196
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
KR+ P + TYN+ + + + + +K +M+ D G S D Y LVN + S
Sbjct: 197 KRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGD-GCSPDSYTYSTLVN-GLGKSG 254
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQK 218
V E + Y+ L+ A GN +D++WK ++ +K
Sbjct: 255 RVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGN---MDRVWKLMKEMSRK 304
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/288 (18%), Positives = 109/288 (37%), Gaps = 44/288 (15%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
+ T +T L+ + + E+AE +++++ Q + YN ++ + GQ++
Sbjct: 62 SPTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAME 121
Query: 101 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
+ E+K K PD +TY +++ + + + F D M + G + + Y L++ +
Sbjct: 122 MFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAM-LERGLTPNIPTYNLLMDAF 180
Query: 161 ITASHLVNAESSTLVEAEKSITQRQWITYDFLI--------------------------- 193
L + E ++ Q +TY+ L+
Sbjct: 181 RKVGQL-DMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPD 239
Query: 194 -----ILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSY-LMLGHLKEVGEIIDQW 247
L GLG ++++ K R +M R L +Y +L L + G + W
Sbjct: 240 SYTYSTLVNGLGKSGRVEEAHKVFR----EMVDRGVAVDLVNYNSLLATLAKAGNMDRVW 295
Query: 248 ---KQSATSDF--DISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
K+ + F D + N ++ A + A E +++ C P
Sbjct: 296 KLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKP 343
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 67/146 (45%), Gaps = 8/146 (5%)
Query: 15 ATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSN 74
A R+ K+F +G+ + S TY+ L++ + E+A ++F +
Sbjct: 218 AGRVGAARKLFHKMTGDG-------CSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRG 270
Query: 75 LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVK 134
++ + + YN ++ G +++V +++E+ RK PD F++N + + D +
Sbjct: 271 VAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAR 330
Query: 135 KFLDEMSCDSGGSDDWVKYVNLVNIY 160
+ M +SG D + Y L++ Y
Sbjct: 331 EVFARM-VESGCKPDLISYNILIDSY 355
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 56/122 (45%), Gaps = 5/122 (4%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
++TY +L+H A ++A + E ++ + + + YN +M + G+ ++ A + +
Sbjct: 380 TKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQ 439
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
++K K V PD +Y + I A +D+ +M G D Y I I A
Sbjct: 440 QMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKA-VGCPVDKAMY----RILIRA 494
Query: 164 SH 165
+H
Sbjct: 495 AH 496
>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Brachypodium distachyon]
Length = 878
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 98/221 (44%), Gaps = 15/221 (6%)
Query: 38 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 97
P SA YT L+ A A+ E+A EL +++ + ++ ++ GQ+E
Sbjct: 175 PFSA-----YTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEP 229
Query: 98 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 157
+V+E+K + PDI YN+ I ++D KF E+ DD V Y ++V
Sbjct: 230 ALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDD-VSYTSMV 288
Query: 158 NIYITASHLVNAES-STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 216
+ A L AE +EAE+ + Y+ +I+ G G+ ++ D +K L +
Sbjct: 289 WVLCKAGRLGEAEELFGQMEAERDVP--CAYAYNTMIM---GYGSAERFDDAYKLLERLR 343
Query: 217 QKMTSRNYICILSSYLMLGHLKEVGE---IIDQWKQSATSD 254
++ + + S LG ++V E + D K+ A +
Sbjct: 344 ERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKKDAKPN 384
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 56/104 (53%), Gaps = 3/104 (2%)
Query: 42 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 101
T TY +++ A ++A LFE K + N ++Y+ ++ + VG++++ L+
Sbjct: 628 PTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLI 687
Query: 102 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVK---KFLDEMSC 142
+EE+ +K + P+++T+N + + T ID+ + + EM C
Sbjct: 688 LEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKC 731
Score = 44.3 bits (103), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 55/126 (43%), Gaps = 2/126 (1%)
Query: 16 TRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVKQS 73
T +D + K + G FE + +Y+ L+H A + +F+ + Q
Sbjct: 530 TYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQ 589
Query: 74 NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQV 133
+ +A YN ++ G+V+K V+EE+K K+V P + TY + A +D+
Sbjct: 590 GFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEA 649
Query: 134 KKFLDE 139
+E
Sbjct: 650 YMLFEE 655
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 84/199 (42%), Gaps = 39/199 (19%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+YT+++ + A +AEELF +++ A YN M+ Y S + + ++E +
Sbjct: 283 SYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERL 342
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLD-----------------EMSCDSGGSD 148
+ + +P + ++N ++ +D+ D +M C +G +
Sbjct: 343 RERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKKDAKPNISTYNIIIDMLCMAGRVN 402
Query: 149 DWVK----------YVNLVNIYITASHLVNAESSTLVEAEK---SITQR----QWITYDF 191
+ K + NL+++ I L A + L EA + S ++R +TY
Sbjct: 403 EAYKIRDEMELAGLFPNLLSVNIMVDRLCKA--NQLEEAHRIFESASERGCNPNSVTYCS 460
Query: 192 LIILYAGLGNKDKIDQIWK 210
LI GLG K KID ++
Sbjct: 461 LI---DGLGKKGKIDDAYR 476
>gi|147771903|emb|CAN75708.1| hypothetical protein VITISV_031421 [Vitis vinifera]
Length = 1313
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 118/276 (42%), Gaps = 10/276 (3%)
Query: 20 LMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNA 79
L K F + G R P TY +L+ +++G ++A ++ +++
Sbjct: 874 LYDKAFSLFKGMRNHGTWP----NESTYNSLIQMFSGGDLVDEARDILAEMQKMGFKPQC 929
Query: 80 LMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE 139
L ++ ++ Y +G++ V EE+ R V P+ Y I+ + T N+++ + +
Sbjct: 930 LTFSAVIACYARLGRLPDAVGVYEEMVRLGVKPNEVVYGSLINGFSETGNVEEALCYFRK 989
Query: 140 MSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI-TQRQWITYDFLIILYAG 198
M + G S + + +L+ Y L A+ TL E K + + + +I LYA
Sbjct: 990 MD-EFGISANQIVLTSLIKAYSKVGCLEGAK--TLYEGMKDLEGGPDIVASNSMINLYAD 1046
Query: 199 LGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDIS 258
LG + I+ LR K ++ ++ Y LG L E ++ D+ KQS D +
Sbjct: 1047 LGLVSEAKLIFDDLRQ-KGSADGVSFATMMYLYKNLGMLDEAIDVADEMKQSGFLR-DCA 1104
Query: 259 ACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
+ N+++ ++ G E ++ + P +
Sbjct: 1105 SFNKVMACYATNGQLSACGELLHEMISRRILPDTGT 1140
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 111/236 (47%), Gaps = 4/236 (1%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
+ + TY L+ LY A + A ++F + + ++ + + +N M+ S G + +
Sbjct: 647 PRLTATYNTLIDLYGKAGRLKDAADVFAEMLKLGVAMDTITFNTMIYTCGSHGHLSEAET 706
Query: 101 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
++ E++ + + PD TYN+++S A NID K ++ + G D V + ++++
Sbjct: 707 LLTEMEERGISPDTKTYNIFLSLYADGGNIDAALKCYRKIR-EVGLFPDVVTHRAVLHV- 764
Query: 161 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 220
+ ++V + + E ++S + + +I +Y G DK +I+ + + +++
Sbjct: 765 LCERNMVGEVETVIAEMKRSRVRVDEHSIPVVIKMYVNEGLLDKA-KIFLEEHLLEDELS 823
Query: 221 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
SR + I+ +Y G E E + K+ D+ N ++ A+ L +KA
Sbjct: 824 SRTRVAIIDAYAEKGLWAE-AENVFIGKRDLGQKKDVVEYNVMVKAYGKAKLYDKA 878
>gi|224097576|ref|XP_002310993.1| predicted protein [Populus trichocarpa]
gi|222850813|gb|EEE88360.1| predicted protein [Populus trichocarpa]
Length = 877
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/293 (20%), Positives = 114/293 (38%), Gaps = 56/293 (19%)
Query: 4 HKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTE 61
+EF L YA R D+ H + FE + + +S YT+L+H YA + E
Sbjct: 302 RREFGLMVGYYARRGDM-------HRARQTFESMRVRGIYPSSHVYTSLIHAYAVGRDME 354
Query: 62 -----------------------------------------KAEELFERVKQSNLSFNAL 80
+AE L +++ +
Sbjct: 355 EALSCVRKMKEEGVEMSLVTYSIVVGGFAKIGNADQSCNMDRAESLVREMEEEGIDAPID 414
Query: 81 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLD-- 138
+Y+ MM Y +G EK +V + +K P + +Y I+ + +V K L+
Sbjct: 415 IYHTMMNGYTMIGNEEKCLIVFKRLKECGFAPSVISYGCLIN---MYTKMGKVSKALEVS 471
Query: 139 EMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAG 198
+M +G + Y L+N ++ NA + + K + + Y+ +I + G
Sbjct: 472 KMMESAGIKHNMKTYSMLINGFLKLKDWTNA-FTVFEDVIKDGLKPDVVLYNNIIKAFCG 530
Query: 199 LGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 251
+GN D+ + K ++ + + TSR ++ I+ + G ++ EI D ++S
Sbjct: 531 MGNMDRAIHMVKEMQKKRHRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSG 583
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 82/187 (43%), Gaps = 2/187 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT +++ YA T KA E F +++ L + Y ++ G+++ V E+
Sbjct: 625 TYTTIMNGYAALGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTREM 684
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+N+ + F YN+ I A ++ + + +M G D Y + +N A
Sbjct: 685 SAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQMK-QEGVQPDIHTYTSFINACCKAGD 743
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
++ A + T+ E E + TY LI +A +K + ++ +++ K Y
Sbjct: 744 MLRA-TKTIQEMEALGVKPNVKTYTTLIHGWACASLPEKALRCFEEMKLAGLKPDKAVYH 802
Query: 226 CILSSYL 232
C+++S L
Sbjct: 803 CLMTSLL 809
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 83/175 (47%), Gaps = 8/175 (4%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 102
TS T+ ++H +A A +A E+F+ +++S +N ++ + Q+EK ++
Sbjct: 552 TSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRQMEKAVEIL 611
Query: 103 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 162
+E+ V PD TY ++ AA + + ++ ++ + G D Y L+
Sbjct: 612 DEMALAGVSPDEHTYTTIMNGYAALGDTGKAFEYFTKLR-NEGLELDVFTYEALLKACCK 670
Query: 163 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 217
+ + +A + T + ++I + ++ Y+ LI +A G+ +W++ + +Q
Sbjct: 671 SGRMQSALAVTREMSAQNIPRNTFV-YNILIDGWARRGD------VWEAADLMQQ 718
>gi|224135699|ref|XP_002322139.1| predicted protein [Populus trichocarpa]
gi|222869135|gb|EEF06266.1| predicted protein [Populus trichocarpa]
Length = 866
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 110/246 (44%), Gaps = 4/246 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG-QVEKVALVVEE 104
+YTAL++ Y E + EL ER+K+ +S + L YN ++ G E + + E
Sbjct: 180 SYTALINSYGRNGKYEVSLELLERMKKERVSPSILTYNTVINSCARGGLDWEGLLGLFAE 239
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
++ + + PDI TYN + +C+ D+ + M+ + G D Y LV+ + +
Sbjct: 240 MRHEGIQPDIVTYNTLLCACSNRGLGDEAEMVFRTMN-EGGVVPDITTYTYLVDTFGKLN 298
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
L + S L E + + +Y+ L+ YA +GN + +++ ++ + Y
Sbjct: 299 RL-DKVSELLKEMASTGNVPEISSYNVLLEAYARIGNIEDATGVFRLMQEAGCVPNAETY 357
Query: 225 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 284
+L Y G EV E+ + K S T D + N L+ F + G ++ +
Sbjct: 358 SILLGLYGKHGRYDEVRELFLEMKVSNTEP-DAATYNTLIDVFGEGGYFKEVVTLFHDMA 416
Query: 285 QKNCAP 290
++N P
Sbjct: 417 EENVEP 422
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 96/244 (39%), Gaps = 37/244 (15%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
YT ++ L EK ++FE + +S + Y ++ Y G+ E ++E +K
Sbjct: 146 YTIMISLLGREGLLEKCSDIFEEMGAHGVSRSVFSYTALINSYGRNGKYEVSLELLERMK 205
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
++ V P I TYN I+SCA G DW + L
Sbjct: 206 KERVSPSILTYNTVINSCAR-------------------GGLDWEGLLGL---------- 236
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 226
E Q +TY+ L+ + G D+ + +++++ Y
Sbjct: 237 -------FAEMRHEGIQPDIVTYNTLLCACSNRGLGDEAEMVFRTMNEGGVVPDITTYTY 289
Query: 227 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 286
++ ++ L L +V E++ + + +IS+ N LL A++ +G E A L+ +
Sbjct: 290 LVDTFGKLNRLDKVSELLKEMASTGNVP-EISSYNVLLEAYARIGNIEDATGVFRLMQEA 348
Query: 287 NCAP 290
C P
Sbjct: 349 GCVP 352
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 10/161 (6%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
+ETY+ LL LY ++ ELF +K SN +A YN ++ ++ G ++V +
Sbjct: 354 AETYSILLGLYGKHGRYDEVRELFLEMKVSNTEPDAATYNTLIDVFGEGGYFKEVVTLFH 413
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
++ +NV P++ TY I +C D KK L MS + G Y ++ Y A
Sbjct: 414 DMAEENVEPNMETYEGLIFACGKGGLHDDAKKILLHMS-EKGMIPSSKAYTGVIEAYGQA 472
Query: 164 S----HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 200
+ LV + + ++ +I TY+ LI ++A G
Sbjct: 473 AMYEEALVTLNTMNEMGSKPTIE-----TYNTLIYMFARGG 508
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 81/190 (42%), Gaps = 10/190 (5%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT L+ + +K EL + + + YN ++ Y +G +E V +
Sbjct: 286 TYTYLVDTFGKLNRLDKVSELLKEMASTGNVPEISSYNVLLEAYARIGNIEDATGVFRLM 345
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ VP+ TY++ + D+V++ EM S D Y L++++ +
Sbjct: 346 QEAGCVPNAETYSILLGLYGKHGRYDEVRELFLEMKV-SNTEPDAATYNTLIDVFGEGGY 404
Query: 166 LVNAESSTLVE--AEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM--TS 221
E TL AE+++ + TY+ LI G D +I L M+++ M +S
Sbjct: 405 F--KEVVTLFHDMAEENV-EPNMETYEGLIFACGKGGLHDDAKKIL--LHMSEKGMIPSS 459
Query: 222 RNYICILSSY 231
+ Y ++ +Y
Sbjct: 460 KAYTGVIEAY 469
>gi|449523950|ref|XP_004168986.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 191
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 59/110 (53%), Gaps = 3/110 (2%)
Query: 31 ERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYM 90
E YF +P K + + ALL+ YA K+ +KA + +++K+ + +L YN M LY
Sbjct: 84 EDYFNNMPSQLKRCQVHIALLNCYAHEKYADKANAVLQKIKEMGFAKTSLPYNITMNLYH 143
Query: 91 SVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
+G+ E++ +K +V D FTY +S+ A + ++K +++M
Sbjct: 144 QIGEFERLD---SPLKETDVDHDQFTYTTRLSAYATAFDFTGIEKIMEQM 190
>gi|242046162|ref|XP_002460952.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
gi|241924329|gb|EER97473.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
Length = 796
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 58/114 (50%), Gaps = 1/114 (0%)
Query: 49 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 108
A++ +Y K +K EE+ +K+++++ +A YN +M +Y +G EK ++ EIK
Sbjct: 611 AMVSIYGKNKMVKKVEEVLTLMKENSINHSAATYNSLMHMYSRLGDCEKCEAILTEIKSS 670
Query: 109 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 162
+ PD ++YN I + + + + EM C SG D V Y + Y+
Sbjct: 671 GMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKC-SGVKPDIVTYNIFIKSYVA 723
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/253 (20%), Positives = 114/253 (45%), Gaps = 11/253 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+ +LL +Y A+ E+A + ++++ + + + + YN +++ Y+ G +E+ + +E+
Sbjct: 293 TFNSLLDVYGKARRHEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEM 352
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ + + PD+ TY IS ID EM +G S + Y L+ + H
Sbjct: 353 EFRGMKPDVVTYTTLISGLDRIGKIDAALATYSEM-VRNGCSPNLCTYNALIKM-----H 406
Query: 166 LVNAESSTLVEAEKSITQRQW----ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 221
V + + ++ + + +T++ L+ ++ G ++ ++K ++
Sbjct: 407 GVRGKFTEMMIVFDDLRSAGYVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPER 466
Query: 222 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 281
Y+ ++SSY G + EI + ++ DIS N +L A + G +A +
Sbjct: 467 DTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYP-DISTYNAVLSALARGGRWVQAEKLFA 525
Query: 282 LLLQKNCAPTNAS 294
+ ++C P S
Sbjct: 526 EMEDRDCKPDELS 538
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 66/133 (49%), Gaps = 9/133 (6%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 102
++ TY +L+H+Y+ EK E + +K S + + YN ++ Y GQ+++ + +
Sbjct: 640 SAATYNSLMHMYSRLGDCEKCEAILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLF 699
Query: 103 EEIKRKNVVPDIFTYNLWISSCAATL----NIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 158
E+K V PDI TYN++I S A L ID V+ + + G + Y +++
Sbjct: 700 SEMKCSGVKPDIVTYNIFIKSYVANLMFEEAIDLVRYLVAQ-----GCKPNERTYNSILE 754
Query: 159 IYITASHLVNAES 171
Y +V A+S
Sbjct: 755 GYCRHGRMVEAKS 767
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 111/247 (44%), Gaps = 7/247 (2%)
Query: 46 TYTALLHLYA-GAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
TY A+L A G +W + AE+LF ++ + + L Y+ ++ Y + +++K+ + E+
Sbjct: 503 TYNAVLSALARGGRWVQ-AEKLFAEMEDRDCKPDELSYSSLLHAYANAKKLDKMKALSED 561
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN-LVNIYITA 163
I + + P + + ++ + +K E+ D + +N +V+IY
Sbjct: 562 IYAQRIEPHNWLVKTLVLVNNKVNSLSETEKAFQELRRRRCSLD--INVLNAMVSIYGKN 619
Query: 164 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 223
+ E + E SI TY+ L+ +Y+ LG+ +K + I ++ + + +
Sbjct: 620 KMVKKVEEVLTLMKENSINH-SAATYNSLMHMYSRLGDCEKCEAILTEIKSSGMRPDRYS 678
Query: 224 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 283
Y ++ +Y G +KE + + K S DI N + ++ + E+A + L
Sbjct: 679 YNTVIYAYGRKGQMKEASRLFSEMKCSGVKP-DIVTYNIFIKSYVANLMFEEAIDLVRYL 737
Query: 284 LQKNCAP 290
+ + C P
Sbjct: 738 VAQGCKP 744
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 87/200 (43%), Gaps = 5/200 (2%)
Query: 40 SAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLY--MSVGQVEK 97
A + YTAL+ ++ A A +F R+ + + YN ++ +Y MSV E
Sbjct: 181 PAPDASAYTALVSEFSRAGRFRDAVAVFRRMVDGGVQPALVTYNVVLHVYSKMSVPWKE- 239
Query: 98 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 157
V ++V+ +K + D +TYN IS C + + DEM +G D V + +L+
Sbjct: 240 VVVLVDSMKEDGIELDRYTYNTLISCCRRRGLYREAAQMFDEMKA-AGFEPDKVTFNSLL 298
Query: 158 NIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 217
++Y A A L + E + +TY+ LI Y G ++ ++ + +
Sbjct: 299 DVYGKARRHEEA-IGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGM 357
Query: 218 KMTSRNYICILSSYLMLGHL 237
K Y ++S +G +
Sbjct: 358 KPDVVTYTTLISGLDRIGKI 377
>gi|302768815|ref|XP_002967827.1| hypothetical protein SELMODRAFT_88115 [Selaginella moellendorffii]
gi|300164565|gb|EFJ31174.1| hypothetical protein SELMODRAFT_88115 [Selaginella moellendorffii]
Length = 289
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 109/237 (45%), Gaps = 10/237 (4%)
Query: 42 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG-QVEKVAL 100
K + Y ALLH + A E ++LF +KQS + N L YN +M Y+ G ++ KV
Sbjct: 44 KDAGMYNALLHAFCKAGKLEAVDDLFRDMKQS-IRPNHLSYNILMHSYVKAGHELTKVVS 102
Query: 101 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
V +E+ + V + +YN+ I++CA + + F M + + Y +L+N+Y
Sbjct: 103 VFKEMYLRGVKASVASYNILIAACATGKQAWEARVFFSNMK-KQDLEPNVITYSSLINVY 161
Query: 161 ITASHLVNAESS--TLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQK 218
+ + + N ++ L E K+ T+ L+ Y G ++ +I+++++ +
Sbjct: 162 VASGDVGNCAAALDVLREMVKAEVMPNVTTFSCLLHGYGQEGRIEEAMKIFQTMKDLGIE 221
Query: 219 MTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA-----TSDFDISACNRLLGAFSDV 270
++ + +++ Y GH + +S S + C + +GA+ +V
Sbjct: 222 PSAITFNILMTMYSKSGHHALAQSCFHEMIESGLEPTYVSFLSLMYCFKSVGAYKEV 278
>gi|413917168|gb|AFW57100.1| hypothetical protein ZEAMMB73_992270 [Zea mays]
Length = 442
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 115/260 (44%), Gaps = 7/260 (2%)
Query: 15 ATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKA-EELFERVK 71
T ID+ + + E L SA + Y+ ++ +Y A+ + A L E K
Sbjct: 93 CTMIDVFSTMERFADAETILLELKASASVLDMIAYSVIVRMYIKARRLKDACSVLAEMEK 152
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
Q + + ++ +M+ Y G +EK+A I++ V D YN I+ C + +D
Sbjct: 153 QKEIIPDKYLFLDMLRTYQKCGLLEKLADTYYWIRKSQVKCDEAMYNCIINCCGRAIPVD 212
Query: 132 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 191
++ + DEM G + V + L++IY A AE ++ ++ + I+Y+
Sbjct: 213 ELSRIFDEM-LQQGHLANTVTFNVLLDIYGKAGLFNRAEKVFIMARKQGLA--DIISYNT 269
Query: 192 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 251
+I YA GN ++ + ++ ++ Y C+L +Y G L+E ++ + K+ A
Sbjct: 270 IIAAYAKGGNFLSMNYFVQMMQDAGFPVSLEAYNCMLDAYGKAGRLEEFASVLQKMKR-A 328
Query: 252 TSDFDISACNRLLGAFSDVG 271
FD N ++ + G
Sbjct: 329 KCKFDHYTYNIMINIYGRRG 348
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 61/122 (50%), Gaps = 4/122 (3%)
Query: 36 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 95
G P+S E Y +L Y A E+ + +++K++ F+ YN M+ +Y G +
Sbjct: 294 GFPVSL---EAYNCMLDAYGKAGRLEEFASVLQKMKRAKCKFDHYTYNIMINIYGRRGWI 350
Query: 96 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 155
+ V+ V+ E+K + V PD+++YN I + + K + EM G S D V Y N
Sbjct: 351 QDVSNVLAELKDRGVEPDLYSYNTLIKAYGIARMPEDAVKLMQEMRV-KGISPDRVTYAN 409
Query: 156 LV 157
L+
Sbjct: 410 LI 411
>gi|302769103|ref|XP_002967971.1| hypothetical protein SELMODRAFT_145138 [Selaginella moellendorffii]
gi|300164709|gb|EFJ31318.1| hypothetical protein SELMODRAFT_145138 [Selaginella moellendorffii]
Length = 1354
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 38/246 (15%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
+ + ALL LY+ AEEL + +K++ L + +YN M++LY +G K ALV +
Sbjct: 776 QVFKALLALYSRETVEIDAEELVKDIKKAGLELDMDIYNHMISLYSKLGSYRKAALVFKG 835
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
++ PD T+N I + + + + L EM +K N NI
Sbjct: 836 MQEIGCSPDATTFNTLIMLYSRNQMVQEAQALLREM----------IKTGNAPNIS---- 881
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
TY LI Y L + + ++KS+ T K + Y
Sbjct: 882 -----------------------TYTTLISAYGRLQAYEDAELVFKSIAETGCKPDATAY 918
Query: 225 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 284
+++ Y G +++ E+I+Q K + ++ + L+ ++ G T KA E L
Sbjct: 919 NVMINVYRKAGEHRKIEEVIEQMKADGF-EPSLTTIHMLMDSYGKGGATGKAEEVLETLP 977
Query: 285 QKNCAP 290
+ +P
Sbjct: 978 EIGMSP 983
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 65/132 (49%), Gaps = 12/132 (9%)
Query: 40 SAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVA 99
+A TYT L+ Y + E AE +F+ + ++ +A YN M+ +Y G+ K+
Sbjct: 876 NAPNISTYTTLISAYGRLQAYEDAELVFKSIAETGCKPDATAYNVMINVYRKAGEHRKIE 935
Query: 100 LVVEEIKRKNVVPDIFTYNLWISS---CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 156
V+E++K P + T ++ + S AT ++V + L E+ G S D + Y ++
Sbjct: 936 EVIEQMKADGFEPSLTTIHMLMDSYGKGGATGKAEEVLETLPEI----GMSPDAIHYTSI 991
Query: 157 VNIYITASHLVN 168
+N SHL N
Sbjct: 992 IN-----SHLNN 998
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 111/256 (43%), Gaps = 15/256 (5%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
A +L + A A+ELF+R +S++ +YN +M++Y G V
Sbjct: 77 APNPRMLAVMLSVLGRANQPGLAQELFDRA-ESSIGNCVQVYNSLMSVYARHGDWNSVQQ 135
Query: 101 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
++ ++ + PD+ T+N+ I + + + L + +G D + Y N
Sbjct: 136 LLCRMQDRGCRPDLVTFNIVIKARTRGGMQEGLASSLLQDVYAAGLRPDTITY----NTL 191
Query: 161 ITASHLVNAESSTLVEAEKSITQRQ------WITYDFLIILYAGLGNKDKIDQIWKSLRM 214
I+A L N S ++ E+ QRQ W TY+ +I +Y G + I++ ++
Sbjct: 192 ISACSLNNRLSDAILIFEE--MQRQGCDPDIW-TYNAMISVYGRAGRVEAASSIFRIMQE 248
Query: 215 TKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTE 274
+ Y +L ++ G ++EV I + + S +I+ N ++ + G+
Sbjct: 249 QGFTPDAVTYNSVLHAFARDGRIEEVERIRGMMRDARCSSDEITY-NTMIHMYGKAGMHR 307
Query: 275 KANEFHMLLLQKNCAP 290
KA E ++ + ++ P
Sbjct: 308 KAEELYVQMKEEGRCP 323
Score = 44.7 bits (104), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 40/228 (17%), Positives = 96/228 (42%), Gaps = 3/228 (1%)
Query: 63 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 122
A L + V + L + + YN +++ ++ L+ EE++R+ PDI+TYN IS
Sbjct: 169 ASSLLQDVYAAGLRPDTITYNTLISACSLNNRLSDAILIFEEMQRQGCDPDIWTYNAMIS 228
Query: 123 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT 182
++ M + G + D V Y ++++ + + E + + +
Sbjct: 229 VYGRAGRVEAASSIFRIMQ-EQGFTPDAVTYNSVLHAFARDGRIEEVERIRGMMRDARCS 287
Query: 183 QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 242
+ ITY+ +I +Y G K ++++ ++ + S + ++ + G + E
Sbjct: 288 SDE-ITYNTMIHMYGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVNEAAA 346
Query: 243 IIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
+ + +S + A + ++ A++ + A + +L+ P
Sbjct: 347 MFEDMLKSQVRP-TLQAFSAMICAYAKADMFSDAEHTYSCMLRAGVRP 393
Score = 40.4 bits (93), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 43/250 (17%), Positives = 109/250 (43%), Gaps = 3/250 (1%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
A + Y+ALL YA E+A + + + L NA N ++ + G+ ++++
Sbjct: 667 AGNTSAYSALLSAYAETGNFERATRALDNMVAAGLQPNAACANYVLEAFGRAGKAKELSE 726
Query: 101 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
+ + + P+ T+ + + + N+++ + +M ++G S + L+ +Y
Sbjct: 727 FYQRLPEMGITPNSRTFVVIFHAFSRNGNLEEARSMYRQMR-EAGFSPSIQVFKALLALY 785
Query: 161 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 220
+ ++AE + + +K+ + Y+ +I LY+ LG+ K ++K ++
Sbjct: 786 SRETVEIDAE-ELVKDIKKAGLELDMDIYNHMISLYSKLGSYRKAALVFKGMQEIGCSPD 844
Query: 221 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 280
+ + ++ Y ++E ++ + ++ + +IS L+ A+ + E A
Sbjct: 845 ATTFNTLIMLYSRNQMVQEAQALLREMIKTGNAP-NISTYTTLISAYGRLQAYEDAELVF 903
Query: 281 MLLLQKNCAP 290
+ + C P
Sbjct: 904 KSIAETGCKP 913
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/152 (20%), Positives = 66/152 (43%), Gaps = 2/152 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY A++ +Y A E A +F +++ + +A+ YN ++ + G++E+V + +
Sbjct: 222 TYNAMISVYGRAGRVEAASSIFRIMQEQGFTPDAVTYNSVLHAFARDGRIEEVERIRGMM 281
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ D TYN I + ++ +M + G D V + L++ + +
Sbjct: 282 RDARCSSDEITYNTMIHMYGKAGMHRKAEELYVQMK-EEGRCPDSVTFTVLIDT-LGKAG 339
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYA 197
VN ++ + KS + + +I YA
Sbjct: 340 FVNEAAAMFEDMLKSQVRPTLQAFSAMICAYA 371
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/126 (19%), Positives = 55/126 (43%), Gaps = 7/126 (5%)
Query: 15 ATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSN 74
A R++ + +F I + + + TY ++LH +A E+ E + ++ +
Sbjct: 233 AGRVEAASSIFRIMQEQGF-------TPDAVTYNSVLHAFARDGRIEEVERIRGMMRDAR 285
Query: 75 LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVK 134
S + + YN M+ +Y G K + ++K + PD T+ + I + +++
Sbjct: 286 CSSDEITYNTMIHMYGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVNEAA 345
Query: 135 KFLDEM 140
++M
Sbjct: 346 AMFEDM 351
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 55/120 (45%), Gaps = 5/120 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY ++H+Y A KAEEL+ ++K+ +++ + ++ G V + A + E++
Sbjct: 292 TYNTMIHMYGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVNEAAAMFEDM 351
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC--DSGGSDDWVKYVNLVNIYITA 163
+ V P + ++ I + A D SC +G D + Y +++++ A
Sbjct: 352 LKSQVRPTLQAFSAMICAYA---KADMFSDAEHTYSCMLRAGVRPDLLAYSVMLDVFFKA 408
>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Glycine max]
Length = 777
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 107/250 (42%), Gaps = 11/250 (4%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
TY LL+ EKAEE+ ++ ++ ++ + + YN ++ Y G V+K L E+
Sbjct: 326 RTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQ 385
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
++ + + P+ T+N IS T +D + ++ M + G S Y +L+N Y
Sbjct: 386 MEERGLEPNRITFNTVISKFCETGEVDHAETWVRRM-VEKGVSPTVETYNSLINGYGQKG 444
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDK--IDQIWKSLRMTKQKMTSR 222
H V L E +K+ + I+Y LI KD+ ID M + ++
Sbjct: 445 HFVRC-FEFLDEMDKAGIKPNVISYGSLINCLC----KDRKLIDAEIVLADMIGRGVSPN 499
Query: 223 N--YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 280
Y ++ + L LK+ D+ QS D + N L+ G +KA +
Sbjct: 500 AEIYNMLIEASCSLSKLKDAFRFFDEMIQSGI-DATLVTYNTLINGLGRNGRVKKAEDLF 558
Query: 281 MLLLQKNCAP 290
+ + K C P
Sbjct: 559 LQMAGKGCNP 568
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 105/246 (42%), Gaps = 12/246 (4%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y +L + + A +LF+ + Q N+ N + YN ++ Y VG +E+ E +K
Sbjct: 195 YNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMK 254
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
+NV ++ TYN ++ + +D ++ L EM ++ +V H
Sbjct: 255 EQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPGGFLSFV-------FDDHS 307
Query: 167 VNAESSTLVEA-EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
A L + E I +R TY L+ +G +K +++ L + +Y
Sbjct: 308 NGAGDDGLFDGKEIRIDER---TYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYN 364
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 285
++++Y G +K+ +Q ++ I+ N ++ F + G + A + +++
Sbjct: 365 ILVNAYCQEGDVKKAILTTEQMEERGLEPNRITF-NTVISKFCETGEVDHAETWVRRMVE 423
Query: 286 KNCAPT 291
K +PT
Sbjct: 424 KGVSPT 429
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 76/180 (42%), Gaps = 2/180 (1%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
+ T ETY +L++ Y + E + + ++ + N + Y ++ ++ +
Sbjct: 427 SPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEI 486
Query: 101 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
V+ ++ + V P+ YN+ I + + + +F DEM SG V Y L+N
Sbjct: 487 VLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEM-IQSGIDATLVTYNTLINGL 545
Query: 161 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 220
+ AE L A K ITY+ LI YA N K +++ +++ K T
Sbjct: 546 GRNGRVKKAEDLFLQMAGKGCNP-DVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPT 604
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 41/75 (54%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y +++ YA KA L +++ + + + YN ++ Y+ +V ++ +V+++K
Sbjct: 642 YNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMK 701
Query: 107 RKNVVPDIFTYNLWI 121
K +VP + TYN+ I
Sbjct: 702 AKGLVPKVDTYNILI 716
Score = 37.7 bits (86), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 50/252 (19%), Positives = 94/252 (37%), Gaps = 10/252 (3%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 102
++ + LL ++ EK +F V S +A+ Y + + + + ++K ++
Sbjct: 121 STRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGKAVQAAVMLKDLDKGFELM 180
Query: 103 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 162
+ + + + P +F YNL + I +K DEM + V Y L++ Y
Sbjct: 181 KSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEM-IQRNMVPNTVTYNTLIDGYCK 239
Query: 163 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 222
+ A E+++ + +TY+ L+ G G D ++ L M
Sbjct: 240 VGGIEEALGFKERMKEQNV-ECNLVTYNSLLNGLCGSGRVDDAREVL--LEMEGSGFLPG 296
Query: 223 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 282
++ S++ H G+ D D LL VG EKA E
Sbjct: 297 GFL----SFVFDDHSNGAGD--DGLFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAK 350
Query: 283 LLQKNCAPTNAS 294
L++ P+ S
Sbjct: 351 LVENGVTPSKIS 362
>gi|302799860|ref|XP_002981688.1| hypothetical protein SELMODRAFT_115229 [Selaginella moellendorffii]
gi|300150520|gb|EFJ17170.1| hypothetical protein SELMODRAFT_115229 [Selaginella moellendorffii]
Length = 289
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 109/237 (45%), Gaps = 10/237 (4%)
Query: 42 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG-QVEKVAL 100
K + Y ALLH + A E ++LF +KQS + N L YN +M Y+ G ++ KV
Sbjct: 44 KDAGMYNALLHAFCKAGKLEAVDDLFRDMKQS-IRPNHLSYNILMHSYVKAGHELTKVVS 102
Query: 101 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
V +E+ + V + +YN+ I++CA + + F M + + Y +L+N+Y
Sbjct: 103 VFKEMYLRGVKASVASYNILIAACATGKQAWEARVFFSNMK-KQDLEPNVITYSSLINVY 161
Query: 161 ITASHLVNAESS--TLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQK 218
+ + + N ++ L E K+ T+ L+ Y G ++ +I+++++ +
Sbjct: 162 VASGDVGNCAAALDVLREMVKAEVMPNVTTFSCLLHGYGQEGKIEEAMKIFQTMKDLGIE 221
Query: 219 MTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA-----TSDFDISACNRLLGAFSDV 270
++ + +++ Y GH + +S S + C + +GA+ +V
Sbjct: 222 PSAITFNILMTMYSKSGHHALAQSCFHEMIESGLEPTYVSFLSLMYCFKSVGAYKEV 278
>gi|255548407|ref|XP_002515260.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545740|gb|EEF47244.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 878
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 101/234 (43%), Gaps = 9/234 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+ +LL + + E A LF + + + YN ++ GQ++ ++ E+
Sbjct: 298 TFNSLLAVCSRGGLWEAARRLFSAMVDKGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEM 357
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
KN++P++ TY+ I A +D +EM G D V Y L+++Y
Sbjct: 358 PTKNILPNVVTYSTMIDGYAKVGRLDDALNMFNEMKFLGVGLDR-VSYNTLLSVYAKLGR 416
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN-- 223
A E E + ++ +TY+ L+ AG G + + D++ + K+ S N
Sbjct: 417 FEQA-LDVCKEMENAGIRKDVVTYNALL---AGYGKQYRYDEVRRVFEEMKRGRVSPNLL 472
Query: 224 -YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
Y ++ Y G KE E+ ++KQ+ D+ + L+ A GL E +
Sbjct: 473 TYSTLIDVYSKGGLYKEAMEVFREFKQAGLKA-DVVLYSALIDALCKNGLVESS 525
Score = 44.3 bits (103), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 44/78 (56%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY+ L+ +Y+ ++A E+F KQ+ L + ++Y+ ++ G VE +++E+
Sbjct: 473 TYSTLIDVYSKGGLYKEAMEVFREFKQAGLKADVVLYSALIDALCKNGLVESSVTLLDEM 532
Query: 106 KRKNVVPDIFTYNLWISS 123
++ + P++ TYN I +
Sbjct: 533 TKEGIRPNVVTYNSIIDA 550
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 54/115 (46%), Gaps = 1/115 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY ALL Y ++ +FE +K+ +S N L Y+ ++ +Y G ++ V E
Sbjct: 438 TYNALLAGYGKQYRYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSKGGLYKEAMEVFREF 497
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
K+ + D+ Y+ I + ++ LDEM+ G + V Y ++++ +
Sbjct: 498 KQAGLKADVVLYSALIDALCKNGLVESSVTLLDEMT-KEGIRPNVVTYNSIIDAF 551
>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 882
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 91/204 (44%), Gaps = 7/204 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
YT L+ A A+ E+A EL ++++ ++ ++ GQV +V+E+
Sbjct: 181 AYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEV 240
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K + PDI YN+ I N+D KF E+ DD V Y +++ + A
Sbjct: 241 KGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDD-VSYTSMIWVLCKAGR 299
Query: 166 LVNAES-STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
L AE +EAE+S+ Y+ +I+ G G+ + + +K L +++ +
Sbjct: 300 LGEAEELFAQMEAERSVP--CAYAYNTMIM---GYGSAGRFEDAYKLLERLRERGCIPSV 354
Query: 225 ICILSSYLMLGHLKEVGEIIDQWK 248
+ S LG ++V E + ++
Sbjct: 355 VSFNSILTCLGKKRKVDEALSLFE 378
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 65/143 (45%), Gaps = 5/143 (3%)
Query: 7 FVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAE 64
F L Y +D K +H E + T TY A++ A ++A
Sbjct: 594 FALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAY 653
Query: 65 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 124
LFE K + N ++Y+ ++ + VG++++ L++EE+ +K + P+++T+N + +
Sbjct: 654 MLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDAL 713
Query: 125 AATLNIDQVK---KFLDEMSCDS 144
I++ + + EM C
Sbjct: 714 VKAEEINEALVCFQSMKEMKCPP 736
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 55/130 (42%), Gaps = 10/130 (7%)
Query: 16 TRIDLMTKVFGIHSGERYFEG------LPLSAKTSETYTALLHLYAGAKWTEKAEELFER 69
T +D + K + G FE LP +Y+ L+H A + +F
Sbjct: 533 TYMDCVFKAGEVEKGRMIFEDIRSYGFLP----DVRSYSILIHGLTKAGQARETSNIFHA 588
Query: 70 VKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLN 129
+KQ + +A YN ++ + G+V K ++EE+K K V P + TY + A
Sbjct: 589 MKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDR 648
Query: 130 IDQVKKFLDE 139
+D+ +E
Sbjct: 649 LDEAYMLFEE 658
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 93/233 (39%), Gaps = 41/233 (17%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVK 71
Y ID K + ++F L + +YT+++ + A +AEELF +++
Sbjct: 252 YNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQME 311
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
A YN M+ Y S G+ E ++E ++ + +P + ++N ++ +D
Sbjct: 312 AERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVD 371
Query: 132 QVKKFLD-----------------EMSCDSGGSDDWVK----------YVNLVNIYITAS 164
+ + +M C G ++ + + NL+ + I
Sbjct: 372 EALSLFEVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVD 431
Query: 165 HLVNAESSTLVEAEK---SITQR----QWITYDFLIILYAGLGNKDKIDQIWK 210
L A L EA K S +QR +TY LI GLG K ++D+ ++
Sbjct: 432 RLCKARK--LEEAYKIFESASQRGCNPDCVTYCSLI---DGLGKKGQVDEAYR 479
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 101/256 (39%), Gaps = 13/256 (5%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
S TY ++ + E+A + + ++ ++L N L N M+ ++E+ + E
Sbjct: 388 SSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFE 447
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV-NIYIT 162
++ PD TY I +D+ + ++M D+G + + V Y +L+ N +I
Sbjct: 448 SASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKM-LDAGHNANPVVYTSLIRNFFI- 505
Query: 163 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGL----GNKDKIDQIWKSLRMTKQK 218
H + + K + +R L+ Y G +K I++ +R
Sbjct: 506 --HGRKEDGHKIF---KELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFL 560
Query: 219 MTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 278
R+Y ++ G +E I KQ + D A N ++ F G KA E
Sbjct: 561 PDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFA-LDARAYNAVVDGFCKSGKVHKAYE 619
Query: 279 FHMLLLQKNCAPTNAS 294
+ +K PT A+
Sbjct: 620 ILEEMKEKCVQPTVAT 635
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 46/238 (19%), Positives = 95/238 (39%), Gaps = 10/238 (4%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSET--YTALLHLYAGAKWTEKAEELFERVK 71
Y + ID + K + R FE + + + YT+L+ + E ++F+ +
Sbjct: 461 YCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELI 520
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
+ + + N M G+VEK ++ E+I+ +PD+ +Y++ I
Sbjct: 521 RRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQAR 580
Query: 132 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 191
+ M G + D Y +V+ + + V+ L E ++ Q TY
Sbjct: 581 ETSNIFHAMK-QQGFALDARAYNAVVDGFCKSGK-VHKAYEILEEMKEKCVQPTVATYGA 638
Query: 192 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN---YICILSSYLMLGHLKEVGEIIDQ 246
++ GL D++D+ + K K N Y ++ + +G + E I+++
Sbjct: 639 IV---DGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEE 693
>gi|356528730|ref|XP_003532952.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g73710-like [Glycine max]
Length = 963
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 107/239 (44%), Gaps = 3/239 (1%)
Query: 38 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 97
P + S TY L+ LY A +A E+F + ++ ++ + +N M+ + S G + +
Sbjct: 265 PQKPRLSNTYNVLIDLYGKAGRLSEAAEVFAEMLKAGVAVDVWTFNTMIFVCGSQGDLAE 324
Query: 98 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 157
++ ++ K V PD T+N+++S A +I + ++G D V Y L+
Sbjct: 325 AEALLGMMEEKGVAPDTKTFNIFLSLYAEARDIGAAVLCYKRIR-EAGLCPDEVTYRALL 383
Query: 158 NIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 217
+ + ++V + E E++ ++ +Y G G+ DK + K ++ +
Sbjct: 384 GV-LCRKNMVREVEDLIDEMERAFVSVDEHCVPGIVEMYVGEGDVDKAFDLLKKFQVNGE 442
Query: 218 KMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
M+S I+ + G +E ++ + + A D+ CN ++ A+ L +KA
Sbjct: 443 -MSSNIRSAIMDVFAEKGLWEEAEDVFYRGRNLAGRKRDVLECNVMIKAYGKAKLYDKA 500
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 104/238 (43%), Gaps = 10/238 (4%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQ-SNLSFNALMYNEMMTLYMSVGQVEKVALV 101
+S +A++ ++A E+AE++F R + + + L N M+ Y +K +
Sbjct: 444 SSNIRSAIMDVFAEKGLWEEAEDVFYRGRNLAGRKRDVLECNVMIKAYGKAKLYDKAISL 503
Query: 102 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 161
+ +K P+ TYN + + +DQ +DEM + G + ++ Y
Sbjct: 504 FKGMKNHGTWPNESTYNSLVQMLSGADLVDQAMDLVDEMQ-EVGFKPPCQTFSAVIGCYA 562
Query: 162 TASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 221
L +A S E ++ + + Y LI G +++ K M ++ S
Sbjct: 563 RLGQLSDA-VSVFKEMVRTGVKPNEVVYGSLI---NGFAEHGSLEEALKYFHMMEESGLS 618
Query: 222 RNYIC---ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
N + +L SY +G+L+ I ++ K + D+ ACN ++G F+D+GL +A
Sbjct: 619 SNLVVLTSLLKSYCKVGNLEGAKAIYERMK-NMEGGLDLVACNSMIGLFADLGLVSEA 675
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/234 (19%), Positives = 96/234 (41%), Gaps = 34/234 (14%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY +L+ + +GA ++A +L + +++ ++ ++ Y +GQ+ V +E+
Sbjct: 518 TYNSLVQMLSGADLVDQAMDLVDEMQEVGFKPPCQTFSAVIGCYARLGQLSDAVSVFKEM 577
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
R V P+ Y I+ A ++++ K+ M +SG S + V +L+ Y +
Sbjct: 578 VRTGVKPNEVVYGSLINGFAEHGSLEEALKYFHMME-ESGLSSNLVVLTSLLKSYCKVGN 636
Query: 166 LVNA---------------------------------ESSTLVEAEKSITQRQWITYDFL 192
L A E+ E + + + I+Y +
Sbjct: 637 LEGAKAIYERMKNMEGGLDLVACNSMIGLFADLGLVSEAKLAFENLREMGRADAISYATI 696
Query: 193 IILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 246
+ LY G+G D+ +I + ++++ +Y +L Y G E GE+I +
Sbjct: 697 MYLYKGVGLIDEAIEIAEEMKLSGLLRDCVSYNKVLVCYAANGQFYECGELIHE 750
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 41/207 (19%), Positives = 89/207 (42%), Gaps = 16/207 (7%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+Y +++LY G ++A E+ E +K S L + + YN+++ Y + GQ + ++ E+
Sbjct: 692 SYATIMYLYKGVGLIDEAIEIAEEMKLSGLLRDCVSYNKVLVCYAANGQFYECGELIHEM 751
Query: 106 KRKNVVPDIFTYNLWIS----SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY- 160
+ ++P+ T+ + + T + Q++ E + + +Y
Sbjct: 752 ISQKLLPNDGTFKVLFTILKKGGIPTEAVAQLESSYQE-------GKPYARQTTFTALYS 804
Query: 161 ITASHLVNAESS-TLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 219
+ H + ES+ T +E+E + ++ I Y G+ +K I+ +R
Sbjct: 805 LVGMHNLALESAQTFIESEVDLDSS---AFNVAIYAYGSAGDINKALNIYMKMRDEHLGP 861
Query: 220 TSRNYICILSSYLMLGHLKEVGEIIDQ 246
YI ++ Y G ++ V +I Q
Sbjct: 862 DLVTYIYLVGCYGKAGMVEGVKQIYSQ 888
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 91/192 (47%), Gaps = 2/192 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+ ++++ A E A ++F+ + + L+ + + YN +++ Y VG + + V E+
Sbjct: 225 TFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEM 284
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
++ +VPD+ T+ I + N++Q + +M + G + V + L++ +
Sbjct: 285 TQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMR-ERGLRMNEVTFTALIDGFCKKGF 343
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
L +A + + E K Q + Y+ LI Y LG D ++ + + + K Y
Sbjct: 344 LDDALLA-VEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYS 402
Query: 226 CILSSYLMLGHL 237
I+S Y +G+L
Sbjct: 403 TIISGYCKVGNL 414
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/251 (19%), Positives = 106/251 (42%), Gaps = 4/251 (1%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQ-SNLSFNALMYNEMMTLYMSVGQVEKVA 99
A + TY L+ + A + AE + +++ N N + +N M+ G++E
Sbjct: 184 APNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGAR 243
Query: 100 LVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 159
V +E+ R+ + PD+ +YN +S + + EM+ G D V + +L++
Sbjct: 244 KVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMT-QRGLVPDVVTFTSLIHA 302
Query: 160 YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 219
A +L A + E+ + + +T+ LI + G D + +R +
Sbjct: 303 TCKAGNLEQAVALVAQMRERGLRMNE-VTFTALIDGFCKKGFLDDALLAVEEMRKCGIQP 361
Query: 220 TSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 279
+ Y +++ Y LG + E+I + + D+ + ++ + VG + A +
Sbjct: 362 SVVCYNALINGYCKLGRMDLARELIREMEAKRVKP-DVVTYSTIISGYCKVGNLDSAFQL 420
Query: 280 HMLLLQKNCAP 290
+ +L+K P
Sbjct: 421 NQKMLKKGVLP 431
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/239 (19%), Positives = 99/239 (41%), Gaps = 12/239 (5%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L+ E+A + ++ + + NA+ YN ++ + G+++ VV +
Sbjct: 154 TYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLM 213
Query: 106 KRK-NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+ + N P++ T+N ++ ++ +K DEM G + D V Y L++ Y
Sbjct: 214 REEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMV-REGLAPDVVSYNTLLSGYCKVG 272
Query: 165 HLVNAESSTLVEAEKSITQRQW----ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 220
L S V +E +TQR +T+ LI GN ++ + +R +M
Sbjct: 273 CL---HESLAVFSE--MTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMN 327
Query: 221 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 279
+ ++ + G L + +++ ++ + N L+ + +G + A E
Sbjct: 328 EVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQP-SVVCYNALINGYCKLGRMDLAREL 385
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY++L+ K A ELFE + Q + + Y ++ + G VEK + +E+
Sbjct: 435 TYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEM 494
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFL 137
RK V+PD+ TY++ I+ + + + + L
Sbjct: 495 IRKGVLPDVVTYSVLINGLSKSARTKEAHRLL 526
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 38/195 (19%), Positives = 80/195 (41%), Gaps = 3/195 (1%)
Query: 82 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 141
YN ++ L +S + + + R V P+++TYN+ + + A +++ + +M
Sbjct: 121 YNAVL-LALSDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMR 179
Query: 142 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 201
+G + + V Y LV + A L AE + E+ + +T++ ++ G
Sbjct: 180 -GAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGR 238
Query: 202 KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 261
+ +++ + +Y +LS Y +G L E + + Q D+
Sbjct: 239 MEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVP-DVVTFT 297
Query: 262 RLLGAFSDVGLTEKA 276
L+ A G E+A
Sbjct: 298 SLIHATCKAGNLEQA 312
>gi|345288455|gb|AEN80719.1| AT1G07590-like protein, partial [Capsella rubella]
gi|345288457|gb|AEN80720.1| AT1G07590-like protein, partial [Capsella rubella]
gi|345288459|gb|AEN80721.1| AT1G07590-like protein, partial [Capsella rubella]
gi|345288461|gb|AEN80722.1| AT1G07590-like protein, partial [Capsella rubella]
gi|345288463|gb|AEN80723.1| AT1G07590-like protein, partial [Capsella rubella]
gi|345288465|gb|AEN80724.1| AT1G07590-like protein, partial [Capsella rubella]
gi|345288467|gb|AEN80725.1| AT1G07590-like protein, partial [Capsella rubella]
gi|345288469|gb|AEN80726.1| AT1G07590-like protein, partial [Capsella rubella]
Length = 195
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 80/164 (48%), Gaps = 3/164 (1%)
Query: 80 LMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE 139
L+YN ++ + G+ + +A + +K +P + TY++ + A NID V K D
Sbjct: 22 LVYNRLIIRNSAPGRRKLIAKDLALMKADKAIPHVSTYHILMKLEANEHNIDGVLKAFDG 81
Query: 140 MSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGL 199
M +G + V Y L + A AE+ T E EKS+T W T D L+ILY L
Sbjct: 82 MK-KAGVEPNEVSYCILAMAHAVARLYTVAEAYT-EEIEKSVTGDNWSTLDILMILYGRL 139
Query: 200 GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI 243
G + ++ + W +R + S++Y+ ++ +G+L E+
Sbjct: 140 GKEKELARTWNVIRGF-HHVRSKSYLLATEAFARVGNLDRAEEL 182
>gi|224076660|ref|XP_002304977.1| predicted protein [Populus trichocarpa]
gi|222847941|gb|EEE85488.1| predicted protein [Populus trichocarpa]
Length = 381
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 111/252 (44%), Gaps = 12/252 (4%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQ----SNLSFNALMYNEMMTLYMSVGQVEKVA 99
S Y + A AK EE+ E KQ S FNA +++LY S G +
Sbjct: 59 SAIYKDTIRRLAAAKKFRYVEEILENQKQYQDMSKEGFNA----RLISLYGSSGMFDNAR 114
Query: 100 LVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 159
V +E+ + + ++N + +C + D+V +S + D V Y ++
Sbjct: 115 KVFDEMLERKCARTVLSFNALLGACVNSKKFDEVGGLFRGLSEELEIEPDLVSYNTVMKA 174
Query: 160 YITASHLVNAESSTLVEAEKSITQRQWITYDFLII-LYAGLGNKDKIDQIWKSLRMTKQK 218
+ L +A S L E EK + IT++ L+ LYA G D ++IW+ ++ K
Sbjct: 175 FCEMGSLDSA-VSLLDEIEKKGLKPDLITFNTLLNGLYAN-GRFDAGERIWQRMKEKNVK 232
Query: 219 MTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 278
R+Y L + +K+ +++++ K +FDI + N L+ F + G E+A
Sbjct: 233 PDGRSYNEKLLGLALEKRMKDATKVVEEMKSEGI-EFDIFSYNALIRGFVNEGDLEEAKG 291
Query: 279 FHMLLLQKNCAP 290
++ + + + P
Sbjct: 292 WYGEIRKSDIKP 303
>gi|357125122|ref|XP_003564244.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like [Brachypodium distachyon]
Length = 502
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 105/247 (42%), Gaps = 8/247 (3%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y L+ + K KA ELF+ + + N Y +++ Y G ++ +++ +K
Sbjct: 154 YIKLITMLGKCKQPGKAHELFQAMVDEGCAPNLESYTALVSAYSRSGSFDRAFSLLDRMK 213
Query: 107 -RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
PD+ TY++ I SC + D+VK L +M+C G + V Y LV+ Y A
Sbjct: 214 ATPGCRPDVQTYSILIKSCLHAYDFDKVKDLLADMAC-GGIRPNTVTYNTLVDAYGKAGR 272
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
ES+ L + W T + + + G + ++ ++ + + + Y
Sbjct: 273 FAEMESTLLEMLSEKCKPDVW-TMNSTLRAFGSSGQIEMMESCYEKFQASGISPNIKTYN 331
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL-- 283
+L SY +++G ++ ++ Q + I N ++ AF G E+ L+
Sbjct: 332 ILLDSYGKAKMYEKMGAVM-EYMQKYYYSWTIVTYNVVIDAFGRAGDLEQMEYIFRLMKS 390
Query: 284 --LQKNC 288
++ NC
Sbjct: 391 DRIKPNC 397
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 47/250 (18%), Positives = 113/250 (45%), Gaps = 4/250 (1%)
Query: 38 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 97
P +TY+ L+ A +K ++L + + N + YN ++ Y G+ +
Sbjct: 216 PGCRPDVQTYSILIKSCLHAYDFDKVKDLLADMACGGIRPNTVTYNTLVDAYGKAGRFAE 275
Query: 98 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 157
+ + E+ + PD++T N + + ++ I+ ++ ++ SG S + Y L+
Sbjct: 276 MESTLLEMLSEKCKPDVWTMNSTLRAFGSSGQIEMMESCYEKFQA-SGISPNIKTYNILL 334
Query: 158 NIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 217
+ Y A + + + +K +TY+ +I + G+ ++++ I++ ++ +
Sbjct: 335 DSYGKA-KMYEKMGAVMEYMQKYYYSWTIVTYNVVIDAFGRAGDLEQMEYIFRLMKSDRI 393
Query: 218 KMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG-LTEKA 276
K ++ +Y +K++ ++ + S T+ DI N L+ A+ VG L E
Sbjct: 394 KPNCVTLCSLIRAYGRADQVKKIETVLRIIENSDTT-LDIVFFNCLVDAYGRVGCLAEMW 452
Query: 277 NEFHMLLLQK 286
+ +M+ L++
Sbjct: 453 DVLNMMKLER 462
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 77/180 (42%), Gaps = 5/180 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T + L + + E E +E+ + S +S N YN ++ Y EK+ V+E +
Sbjct: 294 TMNSTLRAFGSSGQIEMMESCYEKFQASGISPNIKTYNILLDSYGKAKMYEKMGAVMEYM 353
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
++ I TYN+ I + +++Q++ M D + V +L+ Y A
Sbjct: 354 QKYYYSWTIVTYNVVIDAFGRAGDLEQMEYIFRLMKSDR-IKPNCVTLCSLIRAYGRADQ 412
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ E + L E S T + ++ L+ Y +G + ++W L M K + S + +
Sbjct: 413 VKKIE-TVLRIIENSDTTLDIVFFNCLVDAYGRVGC---LAEMWDVLNMMKLERVSPDKV 468
>gi|225447241|ref|XP_002272784.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g73710-like [Vitis vinifera]
Length = 1008
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 117/276 (42%), Gaps = 10/276 (3%)
Query: 20 LMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNA 79
L K F + G R P TY +L+ +++G ++A + +++
Sbjct: 569 LYDKAFSLFKGMRNHGTWP----NESTYNSLIQMFSGGDLVDEARGILAEMQKMGFKPQC 624
Query: 80 LMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE 139
L ++ ++ Y +G++ V EE+ R V P+ Y I+ + T N+++ + +
Sbjct: 625 LTFSAVIACYARLGRLPDAVGVYEEMVRLGVKPNEVVYGSLINGFSETGNVEEALCYFRK 684
Query: 140 MSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI-TQRQWITYDFLIILYAG 198
M + G S + + +L+ Y L A+ TL E K + + + +I LYA
Sbjct: 685 MD-EFGISANQIVLTSLIKAYSKVGCLEGAK--TLYEGMKDLEGGPDIVASNSMINLYAD 741
Query: 199 LGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDIS 258
LG + I+ LR K ++ ++ Y LG L E ++ D+ KQS D +
Sbjct: 742 LGLVSEAKLIFDDLRQ-KGSADGVSFATMMYLYKNLGMLDEAIDVADEMKQSGLLR-DCA 799
Query: 259 ACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
+ N+++ ++ G E ++ + P +
Sbjct: 800 SFNKVMACYATNGQLSACGELLHEMISRRILPDTGT 835
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 113/242 (46%), Gaps = 4/242 (1%)
Query: 35 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 94
+G + + TY L+ LY A + A ++F + + ++ + + +N M+ S G
Sbjct: 336 DGSRRKPRLTATYNTLIDLYGKAGRLKDAADVFAEMLKLGVAMDTITFNTMIYTCGSHGH 395
Query: 95 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 154
+ + ++ E++ + + PD TYN+++S A NID K ++ + G D V +
Sbjct: 396 LSEAETLLTEMEERGISPDTKTYNIFLSLYADGGNIDAALKCYRKIR-EVGLFPDVVTHR 454
Query: 155 NLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM 214
++++ + ++V + + E ++S + + +I +Y G DK +I+ +
Sbjct: 455 AVLHV-LCERNMVGEVETVIAEMKRSRVRVDEHSIPVVIKMYVNEGLLDKA-KIFLEEHL 512
Query: 215 TKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTE 274
+ +++SR + I+ +Y G E E + K+ D+ N ++ A+ L +
Sbjct: 513 LEDELSSRTRVAIIDAYAEKGLWAEA-ENVFIGKRDLGQKKDVVEYNVMVKAYGKAKLYD 571
Query: 275 KA 276
KA
Sbjct: 572 KA 573
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 89/206 (43%), Gaps = 10/206 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
++ +++LY ++A ++ + +KQS L + +N++M Y + GQ+ ++ E+
Sbjct: 765 SFATMMYLYKNLGMLDEAIDVADEMKQSGLLRDCASFNKVMACYATNGQLSACGELLHEM 824
Query: 106 KRKNVVPDIFTYNLWISSC-AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+ ++PD T+ + + L + V + E S G + + + +++ T
Sbjct: 825 ISRRILPDTGTFKVMFTVLKKGGLPTEAVTQL--ESSYQEG--KPYARQAVITSVFSTVG 880
Query: 165 -HLVNAES-STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 222
H ES T + AE + Y+ I Y G+ DK +++ ++ +
Sbjct: 881 LHAFALESCETFLNAEVDLDSS---FYNVAIYAYGASGSIDKALKMFMKMQDEGLEPDLV 937
Query: 223 NYICILSSYLMLGHLKEVGEIIDQWK 248
YI + Y G L+ + I Q K
Sbjct: 938 TYINLAGCYGKAGMLEGLKRIYSQLK 963
>gi|15224262|ref|NP_179484.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75099137|sp|O64624.1|PP163_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g18940
gi|3004555|gb|AAC09028.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|15983785|gb|AAL10489.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
gi|38564280|gb|AAR23719.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
gi|330251736|gb|AEC06830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 118/255 (46%), Gaps = 16/255 (6%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV-EKVALVVEEI 105
YT +LH Y+ EKA +LFER+K+ S + YN ++ ++ +G+ K+ V++E+
Sbjct: 213 YTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEM 272
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM-SCDSGGSDDWVKYVNLVNIYITAS 164
+ K + D FT + +S+CA + + K+F E+ SC G V Y L+ ++ A
Sbjct: 273 RSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSC--GYEPGTVTYNALLQVFGKAG 330
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR-- 222
A S L E E++ +TY+ L+ Y G + + + MTK+ +
Sbjct: 331 VYTEA-LSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIE--MMTKKGVMPNAI 387
Query: 223 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 282
Y ++ +Y G E ++ K++ + N +L S +G ++NE +
Sbjct: 388 TYTTVIDAYGKAGKEDEALKLFYSMKEAGCVP-NTCTYNAVL---SLLGKKSRSNEMIKM 443
Query: 283 LL---QKNCAPTNAS 294
L C+P A+
Sbjct: 444 LCDMKSNGCSPNRAT 458
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 52/96 (54%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY +L+ +Y KAEE+ + +++S L + + YN ++ + G +++ ++ E+
Sbjct: 668 TYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEM 727
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 141
+ + P IFTYN ++S A +++ ++ M+
Sbjct: 728 TERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMA 763
Score = 44.7 bits (104), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 20/95 (21%), Positives = 50/95 (52%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
+ ++L ++ ++AE + E +++ LS + + YN +M +Y+ G+ K +++ ++
Sbjct: 634 FNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLE 693
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 141
+ + PD+ +YN I + + + L EM+
Sbjct: 694 KSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMT 728
Score = 44.3 bits (103), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 49/95 (51%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY ALL ++ A +A + + +++++ +++ YNE++ Y+ G ++ A V+E +
Sbjct: 318 TYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMM 377
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
+K V+P+ TY I + D+ K M
Sbjct: 378 TKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSM 412
>gi|18394846|ref|NP_564110.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174883|sp|Q9LN22.1|PPR54_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g20300, mitochondrial; Flags: Precursor
gi|9558596|gb|AAF88159.1|AC026234_10 Contains similarity to a hypothetical protein T3P18.15 gi|5454201
from Arabidopsis thaliana BAC T3P18 gb|AC005698 and
contains multiple PPR PF|01535 repeats [Arabidopsis
thaliana]
gi|17386104|gb|AAL38598.1|AF446865_1 At1g20300/F14O10_8 [Arabidopsis thaliana]
gi|15450347|gb|AAK96467.1| At1g20300/F14O10_8 [Arabidopsis thaliana]
gi|332191838|gb|AEE29959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 537
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/265 (20%), Positives = 112/265 (42%), Gaps = 10/265 (3%)
Query: 27 IHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTE--KAEELFERVKQSNLSFNALMYNE 84
I E+ F+ + L+ YT + + A + + +A ++F + S + NA+ +N
Sbjct: 271 ISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNN 330
Query: 85 MMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM---S 141
+M +++ G+ EKV V ++K+ PD TYN I + N++ K L+ M
Sbjct: 331 LMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKK 390
Query: 142 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 201
C+ S N + YI VN + ++ + +TY+ L+ ++ G +
Sbjct: 391 CEVNAST-----FNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKS 445
Query: 202 KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 261
D + ++ K + + + Y +++ + +GH ++ + + +S
Sbjct: 446 TDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYE 505
Query: 262 RLLGAFSDVGLTEKANEFHMLLLQK 286
+L G +K E ++QK
Sbjct: 506 MVLAQLRRAGQLKKHEELVEKMIQK 530
>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
Length = 1115
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/206 (19%), Positives = 93/206 (45%), Gaps = 2/206 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+Y L+H + + ++A E++ R+ L + ++ +M ++ V ++EE+
Sbjct: 196 SYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEM 255
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ + P+I+TY + I ID+ + + M D G D V Y L++ TA
Sbjct: 256 ESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMD-DDGCGPDVVTYTVLIDALCTARK 314
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
L +A + + S + +TY L+ ++ G+ DK+++IW + +
Sbjct: 315 LDDA-MCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFT 373
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSA 251
++++ G + E +++D ++
Sbjct: 374 ILVNALCKAGRINEAFDLLDTMRKQG 399
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 80/177 (45%), Gaps = 14/177 (7%)
Query: 42 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 101
T+ TY L+ + + KA E FE++K ++ N + N + +G++ + +
Sbjct: 437 PTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAM 496
Query: 102 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS---CDSGGSDDWVKYVNLVN 158
E+K + PD TYN+ + + +D+ K L EMS C+ D + +L++
Sbjct: 497 FNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEP----DVIVINSLID 552
Query: 159 IYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKID---QIWKSL 212
A + A E+ +TY+ IL AGLG + +I Q+++S+
Sbjct: 553 TLYKAGRVEEA-WQMFCRMEEMNLAPTVVTYN---ILLAGLGKEGQIQKAVQLFESM 605
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 105/247 (42%), Gaps = 7/247 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT L+ A+ + A LF ++K S+ + + Y ++ + G ++KV + E+
Sbjct: 301 TYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEM 360
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ PD+ T+ + +++ I++ LD M G + Y L++ + A+
Sbjct: 361 EADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMR-KQGVLPNLHTYNTLISGLLRANR 419
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
L +A E + TY LI + G+ K + ++ +M + +
Sbjct: 420 LDDA-LDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFE--KMKARGIAPNIVA 476
Query: 226 CILSSYLM--LGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 283
C S Y + +G L E + ++ K S + D N ++ +S VG ++A + +
Sbjct: 477 CNASLYSLAEMGRLGEAKAMFNELKSSGLAP-DSVTYNMMMKCYSKVGQVDEAIKLLSEM 535
Query: 284 LQKNCAP 290
+ C P
Sbjct: 536 SKVQCEP 542
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 50/96 (52%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
++YT L+ + A + A FE++KQ+ L + + YN M+ + E+ + E
Sbjct: 966 KSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHE 1025
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
++ + +VPD++TYN I + I++ K +E+
Sbjct: 1026 MQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEEL 1061
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 105/243 (43%), Gaps = 10/243 (4%)
Query: 42 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 101
T + Y L+ + E A LFE +K + + + YN ++ + G++ ++ +
Sbjct: 788 PTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDL 847
Query: 102 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKK-FLDEMSCDSGGSDDWVKYVNLVNIY 160
+E+ + P+ TYN+ IS+ + +D+ + + +S D S + L++
Sbjct: 848 YDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDF--SPTPCTFGPLIDGL 905
Query: 161 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 220
+ + L +A I Y+ L+ Y LG+ D + +K RM K+ +
Sbjct: 906 LKSGRLDDAHEMFDGMVHYGCRPNSAI-YNILVNGYGKLGHVDTACEFFK--RMVKEGIR 962
Query: 221 S--RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA-N 277
++Y ++ + G + + ++ KQ+ D D+ A N ++ TE+A +
Sbjct: 963 PDLKSYTILVDILCIAGRVDDALHYFEKLKQAGL-DPDLVAYNLMINGLGRSQRTEEALS 1021
Query: 278 EFH 280
FH
Sbjct: 1022 LFH 1024
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 55/120 (45%), Gaps = 3/120 (2%)
Query: 5 KEFVLSD-SDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTE 61
KE + D Y +D++ + YFE L + + Y +++ ++ TE
Sbjct: 958 KEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTE 1017
Query: 62 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 121
+A LF ++ + + YN ++ VG +E+ + EE++ + P++FTYN I
Sbjct: 1018 EALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALI 1077
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 87/217 (40%), Gaps = 20/217 (9%)
Query: 6 EFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKA 63
+F + + ID + K + F+G+ S Y L++ Y + A
Sbjct: 890 DFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTA 949
Query: 64 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 123
E F+R+ + + + Y ++ + G+V+ E++K+ + PD+ YNL I+
Sbjct: 950 CEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMING 1009
Query: 124 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV-NIYITASHLVNAESSTLVEAEKSIT 182
+ ++ EM + G D Y +L+ N+ I + EA K
Sbjct: 1010 LGRSQRTEEALSLFHEMQ-NRGIVPDLYTYNSLILNLGIVG---------MIEEAGKIYE 1059
Query: 183 QRQWI-------TYDFLIILYAGLGNKDKIDQIWKSL 212
+ Q+I TY+ LI Y GN + I+K +
Sbjct: 1060 ELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKM 1096
Score = 37.4 bits (85), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 80/192 (41%), Gaps = 7/192 (3%)
Query: 58 KWTEKAEELFER-VKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFT 116
K T A +F + K+ + +YN ++ ++ V VE + EE+K PD FT
Sbjct: 768 KKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFT 827
Query: 117 YNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES--STL 174
YN I + + I+++ DEM G + + Y +++ + ++ L A L
Sbjct: 828 YNSLIDAHGKSGKINELFDLYDEM-LTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNL 886
Query: 175 VEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLML 234
V + S T T+ LI G D +++ + + S Y +++ Y L
Sbjct: 887 VSGDFSPTP---CTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKL 943
Query: 235 GHLKEVGEIIDQ 246
GH+ E +
Sbjct: 944 GHVDTACEFFKR 955
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 110/278 (39%), Gaps = 36/278 (12%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+TAL+ A + A EL + +K+ + + YN ++ + VG + + +++E+
Sbjct: 221 TFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEM 280
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY----- 160
KR PD+ TY+ I+ +D+ + L +M G D + Y L+N
Sbjct: 281 KRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKME-KEGCPPDTITYNTLINGLGKAGL 339
Query: 161 --------------------ITASHLVNA-------ESSTLV--EAEKSITQRQWITYDF 191
+T S L+ A ES+ ++ E E Q TY
Sbjct: 340 LNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCS 399
Query: 192 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 251
+I + G D D+++ +R Y L+S G KE +I + K+S
Sbjct: 400 IITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESG 459
Query: 252 TSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCA 289
D++ + LL S + A L+++ CA
Sbjct: 460 LLP-DVATYDALLLGLSKTKEVDDACGLLKELIEQGCA 496
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 97/245 (39%), Gaps = 3/245 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L+ A +A LF +++ + YN ++ VG+ +K ++EE+
Sbjct: 116 TYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEM 175
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+R PD+ TY+ I+ + K EM G D + + L++ A
Sbjct: 176 ERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMK-RRGRKPDSITFTALMDALGKAGR 234
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ +A L E ++ + +TY+ LI + +G+ + + ++ K Y
Sbjct: 235 VDDA-LELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYS 293
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 285
C+++ + L E +++ + ++ D N L+ GL A +
Sbjct: 294 CLITGLIKASQLDEACQVLKKMEKEGCPP-DTITYNTLINGLGKAGLLNDAGRLFDRMKS 352
Query: 286 KNCAP 290
K C P
Sbjct: 353 KGCNP 357
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 97/231 (41%), Gaps = 3/231 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY +L++ ++KA EL E +++ + + Y+ ++T G+ K + +E+
Sbjct: 151 TYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEM 210
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
KR+ PD T+ + + +D + LDEM + G V Y L+ +
Sbjct: 211 KRRGRKPDSITFTALMDALGKAGRVDDALELLDEMK-ERGVKPGVVTYNALIAGFGKVGD 269
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
LV A + L E +++ + +TY LI D+ Q+ K + + Y
Sbjct: 270 LVEA-YNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYN 328
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
+++ G L + G + D+ K S + D+ + L+ A E A
Sbjct: 329 TLINGLGKAGLLNDAGRLFDRMK-SKGCNPDVVTYSTLITALGKAARVESA 378
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 107/279 (38%), Gaps = 36/279 (12%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY +LL+ A A E+A+ LFE +K + + + + Y+ ++ G+ E VV E+
Sbjct: 11 TYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEM 70
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ K P+++TYN + D+ + L EM D+G D Y L++ A
Sbjct: 71 QAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMR-DNGCVPDVRTYNCLISTLGKAGR 129
Query: 166 LVNAES----------------------------------STLVEAEKSITQRQWITYDF 191
L A + L E E+ +TY
Sbjct: 130 LSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSS 189
Query: 192 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 251
LI G K ++++ ++ +K S + ++ + G + + E++D+ K+
Sbjct: 190 LITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERG 249
Query: 252 TSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
+ N L+ F VG +A + + C P
Sbjct: 250 VKP-GVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKP 287
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 67/148 (45%), Gaps = 3/148 (2%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVK 71
Y+T I + K + S FE + + TY +++ + A + A+ LF ++
Sbjct: 362 YSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMR 421
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
LS + + YN + G+ ++ + E++K ++PD+ TY+ + + T +D
Sbjct: 422 GKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVD 481
Query: 132 QVKKFLDEMSCDSGGSDDWVKYVNLVNI 159
L E+ + G + D +K+ + I
Sbjct: 482 DACGLLKEL-IEQGCAFDSLKFDECLEI 508
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 77/215 (35%), Gaps = 38/215 (17%)
Query: 76 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKK 135
S N + YN ++ GQ E+ L+ EE+K PD+ +Y+ I+S
Sbjct: 6 SPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSL----------- 54
Query: 136 FLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIIL 195
G + W + +V AE K W TY+ L+
Sbjct: 55 ---------GRAGKWEAALEVV-----------AEMQA-----KGCKPNLW-TYNTLVDC 88
Query: 196 YAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDF 255
G D+ ++ +R R Y C++S+ G L E + + ++
Sbjct: 89 LGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVP- 147
Query: 256 DISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
D N L+ VG ++KA E + + C P
Sbjct: 148 DTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPP 182
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%)
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
++A EL + L A YN ++ G+V + +E++K + PDI +Y+
Sbjct: 516 DEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSL 575
Query: 121 ISSCAATLNIDQVKKFLDEMS 141
IS+ T ID + L+EMS
Sbjct: 576 ISALGQTGQIDTAFELLEEMS 596
>gi|125542535|gb|EAY88674.1| hypothetical protein OsI_10149 [Oryza sativa Indica Group]
Length = 333
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 99/211 (46%), Gaps = 2/211 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L+ +KA +L++ + + N + Y+ ++ + GQVE ++E+
Sbjct: 123 TYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEM 182
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K ++P+I TYN I + N+ + +KFL +M + S D + Y L++ YI
Sbjct: 183 INKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNK-VSPDLITYNTLIHGYIKEDK 241
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ +A L EK Q +TY+ LI ++ GN + I++ + + Y+
Sbjct: 242 MHDA-FKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYM 300
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFD 256
+++ ++ G+ KE ++ D+ Q + D
Sbjct: 301 SMINGHVTAGNSKEAFQLHDEMLQRGFAPDD 331
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 54/283 (19%), Positives = 111/283 (39%), Gaps = 40/283 (14%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY LL+ + AE L +++ + + + ++ Y G+++K + + +
Sbjct: 53 TYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTM 112
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM------------------SCDSGGS 147
+ + PDI TYN I ++D+ D+M C+ G
Sbjct: 113 LNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQV 172
Query: 148 DDWVKYVN-------LVNIYITASHLVNAESSTLVEAEKSITQR--------QWITYDFL 192
+D +++ L NI S + S V + Q+ ITY+ L
Sbjct: 173 EDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTL 232
Query: 193 IILYAGLGNKDKIDQIWKSLRMTKQKMTSRN---YICILSSYLMLGHLKEVGEIIDQWKQ 249
I Y +DK+ +K L M +++ + Y +++ + + G+++E G I ++
Sbjct: 233 IHGYI---KEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCA 289
Query: 250 SATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 292
D ++ G +++A + H +LQ+ AP +
Sbjct: 290 KGIEP-DRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPDD 331
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/125 (20%), Positives = 56/125 (44%), Gaps = 2/125 (1%)
Query: 27 IHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNE 84
+ G+++ + + ++ + + TY L+H Y A +L +++ + + + YN
Sbjct: 207 VSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNM 266
Query: 85 MMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS 144
++ + G V++ + E++ K + PD +TY I+ N + + DEM
Sbjct: 267 LINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRG 326
Query: 145 GGSDD 149
DD
Sbjct: 327 FAPDD 331
>gi|218190151|gb|EEC72578.1| hypothetical protein OsI_06020 [Oryza sativa Indica Group]
Length = 738
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 103/236 (43%), Gaps = 6/236 (2%)
Query: 36 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 95
G+P +A Y A L A+ TEKA E+++R+K+ N + M+ +Y Q
Sbjct: 383 GIPPNATV---YNAYLDGLLKARCTEKAVEVYQRMKRERCRANTETFTLMINVYGKAKQP 439
Query: 96 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 155
V E+K P+I TY +++ A ++ ++ +EM +G D Y
Sbjct: 440 MSSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQ-QAGHEPDVYAYNA 498
Query: 156 LVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMT 215
L+ Y A L S + + +Y+ L+ Y G + + +++ L+
Sbjct: 499 LMEAYSRAG-LPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHEDAEAVFEELKQR 557
Query: 216 KQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 271
T ++++ +L+++ G+ E++ Q +S + D A N +L A++ G
Sbjct: 558 GMSPTMKSHMLLLAAHARSGNATRCEEVMAQLHKSGLTP-DTFALNAMLNAYARAG 612
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 98/233 (42%), Gaps = 14/233 (6%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
+ET+T ++++Y AK + ++F +K N Y ++ + G EK V E
Sbjct: 423 TETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFE 482
Query: 104 EIKRKNVVPDIFTYNLWI---SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
E+++ PD++ YN + S ++ + M C+ D Y LV+ Y
Sbjct: 483 EMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGCEP----DRASYNILVDAY 538
Query: 161 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 220
A +AE + E ++ ++ L+ +A GN + +++ L K +T
Sbjct: 539 GRAGLHEDAE-AVFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVMAQLH--KSGLT 595
Query: 221 SRNYI--CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 271
+ +L++Y G L ++ ++ ++ D D+ N + A+ G
Sbjct: 596 PDTFALNAMLNAYARAGRLDDMERLLAAMERRG--DADVGTYNVAVNAYGRAG 646
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 46/249 (18%), Positives = 95/249 (38%), Gaps = 40/249 (16%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y L+ Y + KAE ++ + ++ Y ++ Y + G + + V+ E++
Sbjct: 321 YNLLIESYGKKRQLNKAESIYMALLEAQCVPTEDTYALLLRAYCNAGSLHRAEGVISEMR 380
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
+ P+ YN ++ ++ + M + ++ + ++N+Y A
Sbjct: 381 EHGIPPNATVYNAYLDGLLKARCTEKAVEVYQRMKRERCRANTET-FTLMINVYGKAKQP 439
Query: 167 VNAESSTLVEAEKSITQRQWI-TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
++ S + KSI + I TY L+ +A G +K +++++ +
Sbjct: 440 MS--SMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEM------------- 484
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 285
Q A + D+ A N L+ A+S GL + A+E L+
Sbjct: 485 -----------------------QQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQH 521
Query: 286 KNCAPTNAS 294
C P AS
Sbjct: 522 MGCEPDRAS 530
>gi|357458279|ref|XP_003599420.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488468|gb|AES69671.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 511
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 125/270 (46%), Gaps = 13/270 (4%)
Query: 17 RIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAE-ELFERVKQSNL 75
R DL+ +V S + G+ + S TY +++ Y A E+ E L + ++ N
Sbjct: 218 RFDLIERVLADMS----YSGIECN---SVTYNSIIDGYGKAGMFEQMENSLTDMIENENC 270
Query: 76 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKK 135
+ N ++ Y + G+++K+ +E + ++ PDI T+N+ I S D++K
Sbjct: 271 QPDVFTLNSLIGSYGNGGKIDKMEKWYDEFQLMSIKPDIKTFNMMIKSYGKAGMYDKMKS 330
Query: 136 FLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQ-WITYDFLII 194
+D M + V Y ++ +Y A + + + K I + +TY L+
Sbjct: 331 VMDFME-RRFFAPTIVTYNTVIEVYGKAGEIEKMDKH--FKNMKHIGMKPNSVTYCSLVN 387
Query: 195 LYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSD 254
Y+ G KID I + + + + + + CI+S+Y +G LK++GE+ + + +
Sbjct: 388 AYSKAGLIRKIDSILRHVENSDVILDTPFFNCIISAYGQVGDLKKMGELFLAMR-ARKCE 446
Query: 255 FDISACNRLLGAFSDVGLTEKANEFHMLLL 284
D + ++ A++ G+TE A +++
Sbjct: 447 PDRTTFTCMIQAYNTQGITEAAKNLETMMI 476
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 93/202 (46%), Gaps = 2/202 (0%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
+TYT LL + + K ++A +L+E + L + +++ Y G +E+
Sbjct: 133 QTYTKLLMMLSKCKQPKEASQLYETMLFEGLKPTVDVLTALVSAYGQSGLFRHAFSTIED 192
Query: 105 IKRK-NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
+K + PD++TY++ IS CA D +++ L +MS SG + V Y ++++ Y A
Sbjct: 193 MKSVVDCKPDVYTYSVLISCCAKFRRFDLIERVLADMS-YSGIECNSVTYNSIIDGYGKA 251
Query: 164 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 223
E+S E Q T + LI Y G DK+++ + ++ K +
Sbjct: 252 GMFEQMENSLTDMIENENCQPDVFTLNSLIGSYGNGGKIDKMEKWYDEFQLMSIKPDIKT 311
Query: 224 YICILSSYLMLGHLKEVGEIID 245
+ ++ SY G ++ ++D
Sbjct: 312 FNMMIKSYGKAGMYDKMKSVMD 333
>gi|334184699|ref|NP_001189682.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330253975|gb|AEC09069.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 613
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 110/251 (43%), Gaps = 5/251 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYTAL++ +A EKAEE+FE++++ L + +YN +M Y G A + +
Sbjct: 323 TYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLM 382
Query: 106 KRKNVVPDIFTYNLWISSCA-ATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+ PD +YN+ + + A L+ D F +EM G + ++ L++ Y A
Sbjct: 383 QHMGCEPDRASYNIMVDAYGRAGLHSDAEAVF-EEMK-RLGIAPTMKSHMLLLSAYSKAR 440
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
+ E+ +E + ++ + ++ LY LG K+++I + Y
Sbjct: 441 DVTKCEAIVKEMSENGVEPDTFVL-NSMLNLYGRLGQFTKMEKILAEMENGPCTADISTY 499
Query: 225 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 284
+++ Y G L+ + E+ + K+ D+ +GA+S L K E ++
Sbjct: 500 NILINIYGKAGFLERIEELFVELKEKNFRP-DVVTWTSRIGAYSRKKLYVKCLEVFEEMI 558
Query: 285 QKNCAPTNASG 295
CAP +
Sbjct: 559 DSGCAPDGGTA 569
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/253 (20%), Positives = 108/253 (42%), Gaps = 13/253 (5%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 102
T+ETY +++LY A + + +L+ ++ N Y ++ + G EK +
Sbjct: 285 TTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIF 344
Query: 103 EEIKRKNVVPDIFTYNLWISS---CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 159
E+++ + PD++ YN + S ++ + M C+ D Y +V+
Sbjct: 345 EQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEP----DRASYNIMVDA 400
Query: 160 YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 219
Y A +AE + E ++ ++ L+ Y+ + K + I K M++ +
Sbjct: 401 YGRAGLHSDAE-AVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKE--MSENGV 457
Query: 220 TSRNYI--CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 277
++ +L+ Y LG ++ +I+ + + + DIS N L+ + G E+
Sbjct: 458 EPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTA-DISTYNILINIYGKAGFLERIE 516
Query: 278 EFHMLLLQKNCAP 290
E + L +KN P
Sbjct: 517 ELFVELKEKNFRP 529
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 1/106 (0%)
Query: 35 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 94
E P +A S TY L+++Y A + E+ EELF +K+ N + + + + Y
Sbjct: 488 ENGPCTADIS-TYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKL 546
Query: 95 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
K V EE+ PD T + +S+C++ ++QV L M
Sbjct: 547 YVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTM 592
Score = 43.9 bits (102), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 60/118 (50%), Gaps = 3/118 (2%)
Query: 26 GIHS-GERYFEGLPL--SAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 82
G+HS E FE + A T +++ LL Y+ A+ K E + + + ++ + + +
Sbjct: 405 GLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVL 464
Query: 83 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
N M+ LY +GQ K+ ++ E++ DI TYN+ I+ ++++++ E+
Sbjct: 465 NSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVEL 522
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 91/192 (47%), Gaps = 2/192 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+ ++++ A E A ++F+ + + L+ + + YN +++ Y VG + + V E+
Sbjct: 225 TFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEM 284
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
++ +VPD+ T+ I + N++Q + +M + G + V + L++ +
Sbjct: 285 TQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMR-ERGLRMNEVTFTALIDGFCKKGF 343
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
L +A + + E K Q + Y+ LI Y LG D ++ + + + K Y
Sbjct: 344 LDDALLA-VEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYS 402
Query: 226 CILSSYLMLGHL 237
I+S Y +G+L
Sbjct: 403 TIISGYCKVGNL 414
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/251 (19%), Positives = 106/251 (42%), Gaps = 4/251 (1%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQ-SNLSFNALMYNEMMTLYMSVGQVEKVA 99
A + TY L+ + A + AE + +++ N N + +N M+ G++E
Sbjct: 184 APNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGAR 243
Query: 100 LVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 159
V +E+ R+ + PD+ +YN +S + + EM+ G D V + +L++
Sbjct: 244 KVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMT-QRGLVPDVVTFTSLIHA 302
Query: 160 YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 219
A +L A + E+ + + +T+ LI + G D + +R +
Sbjct: 303 TCKAGNLEQAVALVAQMRERGLRMNE-VTFTALIDGFCKKGFLDDALLAVEEMRKCGIQP 361
Query: 220 TSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 279
+ Y +++ Y LG + E+I + + D+ + ++ + VG + A +
Sbjct: 362 SVVCYNALINGYCKLGRMDLARELIREMEAKRVKP-DVVTYSTIISGYCKVGNLDSAFQL 420
Query: 280 HMLLLQKNCAP 290
+ +L+K P
Sbjct: 421 NQKMLKKGVLP 431
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/239 (19%), Positives = 99/239 (41%), Gaps = 12/239 (5%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L+ E+A + ++ + + NA+ YN ++ + G+++ VV +
Sbjct: 154 TYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLM 213
Query: 106 KRK-NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+ + N P++ T+N ++ ++ +K DEM G + D V Y L++ Y
Sbjct: 214 REEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEM-VREGLAPDVVSYNTLLSGYCKVG 272
Query: 165 HLVNAESSTLVEAEKSITQRQW----ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 220
L S V +E +TQR +T+ LI GN ++ + +R +M
Sbjct: 273 CL---HESLAVFSE--MTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMN 327
Query: 221 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 279
+ ++ + G L + +++ ++ + N L+ + +G + A E
Sbjct: 328 EVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQP-SVVCYNALINGYCKLGRMDLAREL 385
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/250 (18%), Positives = 108/250 (43%), Gaps = 9/250 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+T+L+H A E+A L ++++ L N + + ++ + G ++ L VEE+
Sbjct: 295 TFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEM 354
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
++ + P + YN I+ +D ++ + EM D V Y +++ Y +
Sbjct: 355 RKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKR-VKPDVVTYSTIISGYCKVGN 413
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKID---QIWKSLRMTKQKMTSR 222
L +A +K + ITY LI GL + +++ ++++++ +
Sbjct: 414 LDSAFQLNQKMLKKGVLP-DAITYSSLI---RGLCEEKRLNDACELFENMLQLGVQPDEF 469
Query: 223 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 282
Y ++ + G++++ + D+ + D+ + L+ S T++A+
Sbjct: 470 TYTTLIDGHCKEGNVEKALSLHDEMIRKGVLP-DVVTYSVLINGLSKSARTKEAHRLLFK 528
Query: 283 LLQKNCAPTN 292
L ++ P N
Sbjct: 529 LYHEDPVPDN 538
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 102/245 (41%), Gaps = 25/245 (10%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY++L+ K A ELFE + Q + + Y ++ + G VEK + +E+
Sbjct: 435 TYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEM 494
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
RK V+PD+ TY++ I+ + + + + L ++ + D+ +KY L+ + S
Sbjct: 495 IRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDN-IKYDALM---LCCS- 549
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
AE ++V K + G + D++++S+ K+ Y
Sbjct: 550 --KAEFKSVVALLKGFCMK---------------GLMKEADKVYQSMLDRNWKLDGSVYS 592
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 285
++ + G++++ Q +S S S + + G F + + E N LL
Sbjct: 593 ILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLL-- 650
Query: 286 KNCAP 290
C P
Sbjct: 651 -TCCP 654
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 38/195 (19%), Positives = 80/195 (41%), Gaps = 3/195 (1%)
Query: 82 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 141
YN ++ L +S + + + R V P+++TYN+ + + A +++ + +M
Sbjct: 121 YNAVL-LALSDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMR 179
Query: 142 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 201
+G + + V Y LV + A L AE + E+ + +T++ ++ G
Sbjct: 180 -GAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGR 238
Query: 202 KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 261
+ +++ + +Y +LS Y +G L E + + Q D+
Sbjct: 239 MEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVP-DVVTFT 297
Query: 262 RLLGAFSDVGLTEKA 276
L+ A G E+A
Sbjct: 298 SLIHATCKAGNLEQA 312
>gi|302821471|ref|XP_002992398.1| hypothetical protein SELMODRAFT_135281 [Selaginella moellendorffii]
gi|300139814|gb|EFJ06548.1| hypothetical protein SELMODRAFT_135281 [Selaginella moellendorffii]
Length = 698
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L+ YA A ++ E L++ ++ ++ N MY M+T+Y GQ +K ++ E+
Sbjct: 354 TYCLLIDAYARAGLMDRLEALYQEMRDCDIRPNTYMYARMITIYRDTGQWQKGVKLLREM 413
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
++ V PD YN+ I++ T ++Q + +M D G D V + +L++ A
Sbjct: 414 QQAGVTPDAHVYNVIINTFGRTRQLEQARIAFFKMQ-DGGIEPDVVSWNSLIDACCKAGQ 472
Query: 166 LVNA 169
+ A
Sbjct: 473 PLEA 476
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 109/276 (39%), Gaps = 17/276 (6%)
Query: 24 VFGIHSGERYF-----EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFN 78
V I++G R F EG+ + K Y L+ A + E+++ S L +
Sbjct: 225 VVDIYTGFRLFQEMQAEGVQVDGKV---YNDLIFACGQAHKPNEGMFFLEKLQASGLVAD 281
Query: 79 ALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI---SSCAATLNIDQVKK 135
Y +M G+ + ++EE+K + P++ YN + S ID VK
Sbjct: 282 RDSYISLMLSLGKHGRTAEAEALLEEMKWYGLRPNLKAYNTLLGGYSRKGQLQQIDTVKT 341
Query: 136 FLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIIL 195
L D+G S + + Y L++ Y A L++ + E + Y +I +
Sbjct: 342 LLR----DTGMSINKITYCLLIDAYARAG-LMDRLEALYQEMRDCDIRPNTYMYARMITI 396
Query: 196 YAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDF 255
Y G K ++ + ++ + Y I++++ L E I Q +
Sbjct: 397 YRDTGQWQKGVKLLREMQQAGVTPDAHVYNVIINTFGRTRQL-EQARIAFFKMQDGGIEP 455
Query: 256 DISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 291
D+ + N L+ A G +A + + ++ CAPT
Sbjct: 456 DVVSWNSLIDACCKAGQPLEARKLYYKMVNDGCAPT 491
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 44/100 (44%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
+ Y+AL + YA E+ + + +++ N+ N M N ++ + G+ ++
Sbjct: 559 GPSPTAYSALANAYAQLGMCEQTLHVLQTMEKENIEINLAMLNLLINAFSMAGRSQEAFA 618
Query: 101 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
V E IK + D TY + + +D+V DEM
Sbjct: 619 VFEYIKEAGLTADKITYTTLMKALIRAEKLDEVSGVFDEM 658
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 59/121 (48%), Gaps = 1/121 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT L+ +YA A+ + A E + +K+ + + Y+ + Y +G E+ V++ +
Sbjct: 529 TYTTLVDVYAQARLFQDAVECLQTMKEDGMGPSPTAYSALANAYAQLGMCEQTLHVLQTM 588
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+++N+ ++ NL I++ + + + + ++G + D + Y L+ I A
Sbjct: 589 EKENIEINLAMLNLLINAFSMAGRSQEAFAVFEYIK-EAGLTADKITYTTLMKALIRAEK 647
Query: 166 L 166
L
Sbjct: 648 L 648
>gi|297839237|ref|XP_002887500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333341|gb|EFH63759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 989
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 104/239 (43%), Gaps = 12/239 (5%)
Query: 43 TSETYTALLHLYA-GAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 101
+S T A++ +YA W E + + + + L YN M+ Y EK +
Sbjct: 475 SSTTLAAVMDVYAEKGLWVEAETVFYGKRNMTGQRNDVLEYNVMIKAYGKAKLHEKALSI 534
Query: 102 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 161
+ +K + PD TYN I A +D ++ L EM DSG Y L+ Y+
Sbjct: 535 FKGMKNQGTWPDECTYNSLIQMLAGVDLVDDAQRILAEM-LDSGCKPGCKTYAALIASYV 593
Query: 162 TASHLVNAESSTLVEA-EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 220
L +A L EA +K+ + + Y LI G +++ + ++ ++
Sbjct: 594 RLGLLSDA--VDLYEAMKKTGVKPNEVVYGSLI---NGFAESGMVEEAIQYFKLMEEHGV 648
Query: 221 SRNYICILS---SYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
N+I + S +Y +G L+E + D+ K S D++A N +L +D+G+ +A
Sbjct: 649 QSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSGGGP-DVAASNSMLSLCADLGIVSEA 706
Score = 43.9 bits (102), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 49/99 (49%)
Query: 38 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 97
P + + T+ L+ LY A A LF + +S + + + +N M+ + G + +
Sbjct: 296 PRKPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSE 355
Query: 98 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKF 136
++++++ K + PD TYN+ +S A +I+ K+
Sbjct: 356 AESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALKY 394
Score = 37.4 bits (85), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 22/114 (19%), Positives = 57/114 (50%), Gaps = 2/114 (1%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y +L++ +A + E+A + F+ +++ + N ++ ++ Y VG +E+ V +++K
Sbjct: 620 YGSLINGFAESGMVEEAIQYFKLMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMK 679
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
PD+ N +S CA + + + +++ G+ D + + ++ +Y
Sbjct: 680 DSGGGPDVAASNSMLSLCADLGIVSEAESIFNDLR--EKGTCDVISFATMMYLY 731
>gi|15226907|ref|NP_181058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100538|sp|O82178.1|PP186_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g35130
gi|3668091|gb|AAC61823.1| hypothetical protein [Arabidopsis thaliana]
gi|330253974|gb|AEC09068.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 591
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 110/251 (43%), Gaps = 5/251 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYTAL++ +A EKAEE+FE++++ L + +YN +M Y G A + +
Sbjct: 301 TYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLM 360
Query: 106 KRKNVVPDIFTYNLWISSCA-ATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+ PD +YN+ + + A L+ D F +EM G + ++ L++ Y A
Sbjct: 361 QHMGCEPDRASYNIMVDAYGRAGLHSDAEAVF-EEMK-RLGIAPTMKSHMLLLSAYSKAR 418
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
+ E+ +E + ++ + ++ LY LG K+++I + Y
Sbjct: 419 DVTKCEAIVKEMSENGVEPDTFVL-NSMLNLYGRLGQFTKMEKILAEMENGPCTADISTY 477
Query: 225 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 284
+++ Y G L+ + E+ + K+ D+ +GA+S L K E ++
Sbjct: 478 NILINIYGKAGFLERIEELFVELKEKNFRP-DVVTWTSRIGAYSRKKLYVKCLEVFEEMI 536
Query: 285 QKNCAPTNASG 295
CAP +
Sbjct: 537 DSGCAPDGGTA 547
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/253 (20%), Positives = 108/253 (42%), Gaps = 13/253 (5%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 102
T+ETY +++LY A + + +L+ ++ N Y ++ + G EK +
Sbjct: 263 TTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIF 322
Query: 103 EEIKRKNVVPDIFTYNLWISS---CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 159
E+++ + PD++ YN + S ++ + M C+ D Y +V+
Sbjct: 323 EQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEP----DRASYNIMVDA 378
Query: 160 YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 219
Y A +AE + E ++ ++ L+ Y+ + K + I K M++ +
Sbjct: 379 YGRAGLHSDAE-AVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKE--MSENGV 435
Query: 220 TSRNYI--CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 277
++ +L+ Y LG ++ +I+ + + + DIS N L+ + G E+
Sbjct: 436 EPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTA-DISTYNILINIYGKAGFLERIE 494
Query: 278 EFHMLLLQKNCAP 290
E + L +KN P
Sbjct: 495 ELFVELKEKNFRP 507
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 1/106 (0%)
Query: 35 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 94
E P +A S TY L+++Y A + E+ EELF +K+ N + + + + Y
Sbjct: 466 ENGPCTADIS-TYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKL 524
Query: 95 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
K V EE+ PD T + +S+C++ ++QV L M
Sbjct: 525 YVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTM 570
Score = 43.9 bits (102), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 60/118 (50%), Gaps = 3/118 (2%)
Query: 26 GIHS-GERYFEGLPL--SAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 82
G+HS E FE + A T +++ LL Y+ A+ K E + + + ++ + + +
Sbjct: 383 GLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVL 442
Query: 83 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
N M+ LY +GQ K+ ++ E++ DI TYN+ I+ ++++++ E+
Sbjct: 443 NSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVEL 500
>gi|297842227|ref|XP_002888995.1| hypothetical protein ARALYDRAFT_476621 [Arabidopsis lyrata subsp.
lyrata]
gi|297334836|gb|EFH65254.1| hypothetical protein ARALYDRAFT_476621 [Arabidopsis lyrata subsp.
lyrata]
Length = 863
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 108/246 (43%), Gaps = 4/246 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG-QVEKVALVVEE 104
+YTAL++ Y E + EL +R+K +S + L YN ++ G E + + E
Sbjct: 178 SYTALINAYGRNGRYETSLELLDRMKNDKISPSILTYNTVINACARGGLDWEGLLGLFAE 237
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
++ + + PDI TYN +S+CA D+ + M+ D G D Y +LV +
Sbjct: 238 MRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMN-DGGIVPDLTTYSHLVETFGKLR 296
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
L S L E + +Y+ L+ YA G+ + ++ ++ + Y
Sbjct: 297 RLEKV-SDLLSEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTY 355
Query: 225 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 284
+L+ + G +V ++ + K S T D D + N L+ F + G ++ ++
Sbjct: 356 SVLLNLFGQSGRYDDVRQLFLEMKSSNT-DPDAATYNILIEVFGEGGYFKEVVTLFHDMV 414
Query: 285 QKNCAP 290
++N P
Sbjct: 415 EENIEP 420
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 97/249 (38%), Gaps = 4/249 (1%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
YT ++ L +K E+F+ + +S + Y ++ Y G+ E +++ +K
Sbjct: 144 YTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMK 203
Query: 107 RKNVVPDIFTYNLWISSCA-ATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ P I TYN I++CA L+ + + EM + G D V Y L++
Sbjct: 204 NDKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHE-GIQPDIVTYNTLLSACAIRGL 262
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
AE + I TY L+ + L +K+ + + +Y
Sbjct: 263 GDEAEMVFRTMNDGGIVP-DLTTYSHLVETFGKLRRLEKVSDLLSEMASGGSLPDITSYN 321
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 285
+L +Y G +KE + Q Q+A + + + LL F G + + + +
Sbjct: 322 VLLEAYAKSGSIKEAMGVFHQM-QAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKS 380
Query: 286 KNCAPTNAS 294
N P A+
Sbjct: 381 SNTDPDAAT 389
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 51/102 (50%)
Query: 42 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 101
+ TY+ LL+L+ + + +LF +K SN +A YN ++ ++ G ++V +
Sbjct: 350 PNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTL 409
Query: 102 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCD 143
++ +N+ PD+ TY I +C + +K L M+ +
Sbjct: 410 FHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTAN 451
>gi|224089803|ref|XP_002308816.1| predicted protein [Populus trichocarpa]
gi|222854792|gb|EEE92339.1| predicted protein [Populus trichocarpa]
Length = 700
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 54/95 (56%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY ALLH Y A++ E A +++ +K+ L N ++YN ++ + +G V+K + E++
Sbjct: 353 TYAALLHAYGRARYGEDAFKIYREMKEKGLGLNVVLYNSILAMCADLGHVDKAVEIFEDM 412
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
K + PD +T++ I+ + + + + L+EM
Sbjct: 413 KSSGIKPDSWTFSSMITIFSCCGKVSEAENTLNEM 447
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 101/216 (46%), Gaps = 4/216 (1%)
Query: 33 YFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYM 90
+FE +P + T + ++ Y A EKA L++R + +A ++ ++ +Y
Sbjct: 233 WFEKMPSFGLEPDDVTLSTMIDSYGRAGNVEKALSLYDRARTGEWRLDATAFSTLIRIYK 292
Query: 91 SVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDW 150
G + V EE+K V P++ YN+ + + QVKKF ++ D+G S +
Sbjct: 293 VAGNFDGCLNVYEEMKALGVKPNLVIYNILLDAMGRAKRPWQVKKFYQDI-IDNGLSPSF 351
Query: 151 VKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK 210
V Y L++ Y A + +A EK + + Y+ ++ + A LG+ DK +I++
Sbjct: 352 VTYAALLHAYGRARYGEDAFKIYREMKEKGLGL-NVVLYNSILAMCADLGHVDKAVEIFE 410
Query: 211 SLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 246
++ + K S + +++ + G + E +++
Sbjct: 411 DMKSSGIKPDSWTFSSMITIFSCCGKVSEAENTLNE 446
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 41/87 (47%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y ++L + A +KA E+FE +K S + ++ ++ M+T++ G+V + + E+
Sbjct: 389 YNSILAMCADLGHVDKAVEIFEDMKSSGIKPDSWTFSSMITIFSCCGKVSEAENTLNEMF 448
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQV 133
P+IF I ID V
Sbjct: 449 EAGFQPNIFILTSLIQCYGKAQRIDDV 475
>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 817
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 111/249 (44%), Gaps = 10/249 (4%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
ETY L+ Y ++ ++ E++++ + N + Y ++ G++ + +V+ +
Sbjct: 457 ETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRD 516
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+ + V+P+ YN+ I + +F DEM S S V Y L++
Sbjct: 517 MICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMM-RSEISPTLVTYNVLIDGLCKKG 575
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
L AE L + S ITY+ LI YA GN K ++++++ K T R Y
Sbjct: 576 KLTEAE-DFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTY 634
Query: 225 ICILSSYLMLGHLKEVGEIIDQ-WKQSATSDF--DISACNRLLGAFSDVGLTEKANEFHM 281
++S G KE E++++ + + + D N ++ ++++G T+KA H
Sbjct: 635 HPLIS-----GCSKEGIELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQ 689
Query: 282 LLLQKNCAP 290
+L + P
Sbjct: 690 GMLDQGIHP 698
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 104/248 (41%), Gaps = 9/248 (3%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y L+ K AE++F+ + NL + + YN ++ Y VG+++ + E +K
Sbjct: 214 YNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMK 273
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
K+V P+I T+N +S + + + L EM + G D Y L + +
Sbjct: 274 EKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVN-GFMPDGYTYSILFDGLLRCDDG 332
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL-RMTKQKMTSRN-- 223
A EK I + IL GL + K+++ + L + T+ + +
Sbjct: 333 NGAMELYEQATEKGIRINNYTGS----ILLNGLCKQGKVEKAEEILKKFTENGLVADEVI 388
Query: 224 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 283
Y ++ Y +G + + I++ + I+ N L+ F D+ +KA E+ +
Sbjct: 389 YNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITF-NSLIDKFCDMKEMDKAEEWVKKM 447
Query: 284 LQKNCAPT 291
+K P+
Sbjct: 448 AEKGVTPS 455
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 45/230 (19%), Positives = 92/230 (40%), Gaps = 3/230 (1%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y ++ Y KA ER++ L N++ +N ++ + + +++K V+++
Sbjct: 389 YNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMA 448
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
K V P + TYN I D+ + L++M + G + V Y +L+N +
Sbjct: 449 EKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQME-EIGVKPNVVSYGSLINCLCKDGKI 507
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 226
+ AE + + + Y+ LI +G + + + ++ T Y
Sbjct: 508 LEAEIVLRDMICRGVLPNAQV-YNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNV 566
Query: 227 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
++ G L E + + Q S S D+ N L+ +++ G K
Sbjct: 567 LIDGLCKKGKLTEAEDFLTQITSSGHSP-DVITYNSLISGYANAGNVSKC 615
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 57/132 (43%), Gaps = 2/132 (1%)
Query: 62 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 121
K +LF ++ S + MY + + + + ++ ++ ++++ V P++F YN+ I
Sbjct: 159 KVVDLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLI 218
Query: 122 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI 181
I +K DEM C+ V Y L++ Y L A EKS+
Sbjct: 219 GGLCREKRIRDAEKMFDEM-CNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSV 277
Query: 182 TQRQWITYDFLI 193
IT++ L+
Sbjct: 278 AP-NIITFNSLL 288
>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
Length = 457
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 105/247 (42%), Gaps = 12/247 (4%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y A++ Y GA + A L V + + +A YN ++ G+ V++E+
Sbjct: 3 YNAMVAGYCGAGQLDAARRL---VAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEML 59
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
R+ VPD+ TY + + + Q K LDEM D G + D V Y +VN I
Sbjct: 60 RRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMR-DKGCTPDIVTYNVVVN-GICQEGR 117
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 226
V+ L + ++Y+ I+ GL ++ + + + QK N +
Sbjct: 118 VDDAIEFLKNLPSYGCEPNTVSYN---IVLKGLCTAERWEDAEELMGEMGQKGCPPNVVT 174
Query: 227 --ILSSYLMLGHLKEVG-EIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 283
+L S+L L E E+++Q + + +S N LL AF +KA F L+
Sbjct: 175 FNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSY-NPLLHAFCKQKKMDKAMAFLDLM 233
Query: 284 LQKNCAP 290
+ + C P
Sbjct: 234 VSRGCYP 240
Score = 44.3 bits (103), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 1/112 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+Y +L A+ E AEEL + Q N + +N +++ G VE V+E+I
Sbjct: 139 SYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQI 198
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 157
+ P+ +YN + + +D+ FLD M G D V Y L+
Sbjct: 199 PKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMV-SRGCYPDIVSYNTLL 249
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 88/210 (41%), Gaps = 10/210 (4%)
Query: 30 GERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLY 89
GE +G P + T + L+ E A E+ E++ + + N+L YN ++ +
Sbjct: 161 GEMGQKGCPPNVVT---FNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAF 217
Query: 90 MSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDD 149
+++K ++ + + PDI +YN +++ + +D + L ++ D G +
Sbjct: 218 CKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLK-DKGCAPV 276
Query: 150 WVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIW 209
+ Y N V +T + L E Q ITY + AGL +D+I+
Sbjct: 277 LISY-NTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYS---TIAAGLCREDRIEDAI 332
Query: 210 KSLRMTKQKMTSRNYICILSSYLMLGHLKE 239
++ + N +L + ++LG K
Sbjct: 333 RAFGKVQDMGIRPNT--VLYNAIILGLCKR 360
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 48/245 (19%), Positives = 93/245 (37%), Gaps = 3/245 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L+ G T A + + + + + + Y ++ ++ +++E+
Sbjct: 34 TYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEM 93
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ K PDI TYN+ ++ +D +FL + G + V Y ++ TA
Sbjct: 94 RDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLP-SYGCEPNTVSYNIVLKGLCTAER 152
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+AE + E + +T++ LI G + ++ + + S +Y
Sbjct: 153 WEDAE-ELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYN 211
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 285
+L ++ + + +D DI + N LL A G + A E L
Sbjct: 212 PLLHAFCKQKKMDKAMAFLDLMVSRGCYP-DIVSYNTLLTALCRSGEVDVAVELLHQLKD 270
Query: 286 KNCAP 290
K CAP
Sbjct: 271 KGCAP 275
>gi|334188265|ref|NP_199684.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635750|sp|Q9FKC3.2|PP424_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g48730, chloroplastic; Flags: Precursor
gi|332008334|gb|AED95717.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 508
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 108/248 (43%), Gaps = 7/248 (2%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y L+ + K EKA ELF+ + N +Y +++ Y G+ + ++E +K
Sbjct: 153 YVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMK 212
Query: 107 RK-NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
N PD+ TY++ I S D+V+ L +M G + + Y L++ Y A
Sbjct: 213 SSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMR-RQGIRPNTITYNTLIDAYGKAKM 271
Query: 166 LVNAESSTLVE--AEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 223
V E STL++ E W T + + + G G + ++ ++ + + + R
Sbjct: 272 FVEME-STLIQMLGEDDCKPDSW-TMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRT 329
Query: 224 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 283
+ +L SY G+ K++ ++ ++ Q + I N ++ AF G ++ L+
Sbjct: 330 FNILLDSYGKSGNYKKMSAVM-EYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLM 388
Query: 284 LQKNCAPT 291
+ P+
Sbjct: 389 QSERIFPS 396
>gi|302782984|ref|XP_002973265.1| hypothetical protein SELMODRAFT_98793 [Selaginella moellendorffii]
gi|300159018|gb|EFJ25639.1| hypothetical protein SELMODRAFT_98793 [Selaginella moellendorffii]
Length = 389
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 121/260 (46%), Gaps = 36/260 (13%)
Query: 42 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 101
KT TY +LL A A E + LF+++ + ++ + +N ++ + Q++ +
Sbjct: 68 KTIVTYNSLLQACAAALEIEHTKNLFDKMPE----WDIVSWNILLAAFAENKQLD----L 119
Query: 102 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 161
V++ R+ DI ++ L +++ A + +++ K+F D+M GS D V ++ ++
Sbjct: 120 VKDCFRRMPESDIVSWYLMLTTLAQSDRVEECKEFFDKMPEWHLGSPDVVSCNAMIAGFV 179
Query: 162 TASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 221
H V AE S++QR +T++ +I LYA G+ +I+ M
Sbjct: 180 ENGHFVQAEMMY-----GSMSQRDRVTHNTMIALYARNGDMPTARRIFDG-------MPE 227
Query: 222 RNYIC---ILSSYLMLGHLKEVGEIIDQWKQS--ATSDF---DI-SACNRLLGAFSDVGL 272
R+ C ++S Y GH ++ ++ + A ++F DI SACN GL
Sbjct: 228 RDMACWAGVISGYAQAGHPRDAIDLFRAMEMEGLAPNEFLFTDILSACNH-------TGL 280
Query: 273 TEKANEFHMLLLQKNCAPTN 292
++ + L+ +++ P +
Sbjct: 281 VRESWRYFALMAREHAIPPS 300
>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
Length = 1167
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 108/247 (43%), Gaps = 7/247 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY+ L+ Y + + A+++ +++ N + YN ++ G VE+ +++
Sbjct: 119 TYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDM 178
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ +VPD FTY I+ + ++ K LDEMSC + + V Y NL++ ++
Sbjct: 179 EDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSC-AELKPNVVVYANLIDGFMREG- 236
Query: 166 LVNAESS--TLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 223
NA+ + + E + Q ITYD L+ +G D+ + K + + +
Sbjct: 237 --NADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTIT 294
Query: 224 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 283
Y I+ + + K+ ++ + + + S ++ + ++ G EKA++ +
Sbjct: 295 YNLIIEGHFRHHNKKDAFRLLSEMENAGISP-NVYTYSIMIHGLCQSGEPEKASDLLEEM 353
Query: 284 LQKNCAP 290
K P
Sbjct: 354 TTKGLKP 360
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 61/125 (48%), Gaps = 1/125 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY+ ++H + EKA +L E + L NA +Y +++ Y G V + +++
Sbjct: 329 TYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKM 388
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ NV+PD++ YN I + +++ K+ +M + G + Y L++ Y+
Sbjct: 389 TKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQ-ERGLLPNEFTYSGLIHGYLKNGD 447
Query: 166 LVNAE 170
L +AE
Sbjct: 448 LESAE 452
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 53/131 (40%), Gaps = 35/131 (26%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVA------ 99
TY+ L+H Y E AE+L +R+ + L N ++Y +++ Y +EKV+
Sbjct: 434 TYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSM 493
Query: 100 -----------------------------LVVEEIKRKNVVPDIFTYNLWISSCAATLNI 130
V+ EI++ VPD+ Y+ IS T +
Sbjct: 494 LDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADR 553
Query: 131 DQVKKFLDEMS 141
++ LDEMS
Sbjct: 554 EKAFGILDEMS 564
>gi|147825385|emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera]
Length = 821
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 113/255 (44%), Gaps = 12/255 (4%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV-EKVALVVE 103
+T +LH Y+ E+A +FE+++++ LS + YN M+ +Y +G+ K+ +++
Sbjct: 210 RAWTTILHAYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLD 269
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
E++ + D FT + IS+C +D+ +KF + + G Y +L+ ++ A
Sbjct: 270 EMRSNGLEFDEFTCSTVISACGREGLLDEARKFFARLKSE-GYVAGTFTYNSLLQVFGKA 328
Query: 164 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG----NKDKIDQIWKSLRMTKQKM 219
+ + S L E EK+ +TY+ L+ Y G D ID + + M
Sbjct: 329 G-IYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMP---- 383
Query: 220 TSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 279
+ Y ++++Y G + Q K+S ++ N +LG E+ +
Sbjct: 384 NAITYTTVINAYGKAGKEDKALSFFRQMKESGCVP-NVCTYNAILGMLGKKSRLEEMIDM 442
Query: 280 HMLLLQKNCAPTNAS 294
+ CAP + +
Sbjct: 443 LCDMRSNGCAPNSVT 457
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 101/246 (41%), Gaps = 5/246 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY ALL+ A E AE + +K N Y+ M+ Y G + + EEI
Sbjct: 527 TYNALLNALARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEI 586
Query: 106 KRKNVVPD-IFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
++ P I L +++ + + F + C G D V + ++++I+ +
Sbjct: 587 YNGHIFPSWILLRTLVLANFKRRALMGMERAFQE--FCKHGYKPDLVLFNSMLSIF-AKN 643
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
+ + L +S Q +TY+ L+ +YA G K ++I K ++ + K +Y
Sbjct: 644 KMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEILKGIQKSGGKPDLVSY 703
Query: 225 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 284
++ + G ++E + + S I N + +S G+ + E ++
Sbjct: 704 NTVIKGFCRQGLMQEAIRTLSEMTISGIRPC-IVTYNTFVAGYSGKGMFSEVEEVISYMI 762
Query: 285 QKNCAP 290
Q +C P
Sbjct: 763 QHDCRP 768
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/287 (18%), Positives = 120/287 (41%), Gaps = 10/287 (3%)
Query: 8 VLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELF 67
V+S +D K F E Y G + TY +LL ++ A +A +
Sbjct: 286 VISACGREGLLDEARKFFARLKSEGYVAG-------TFTYNSLLQVFGKAGIYSEALSIL 338
Query: 68 ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAAT 127
+ ++++N + + YNE++ Y+ G E+ A ++ + RK ++P+ TY I++
Sbjct: 339 KEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKA 398
Query: 128 LNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWI 187
D+ F +M +SG + Y ++ + S L L + + +
Sbjct: 399 GKEDKALSFFRQMK-ESGCVPNVCTYNAILGMLGKKSRL-EEMIDMLCDMRSNGCAPNSV 456
Query: 188 TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQW 247
T++ ++ + G ++++++ ++ + + ++ +Y G +V ++ ++
Sbjct: 457 TWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEM 516
Query: 248 KQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
++ + ++ N LL A + G E A + + K P S
Sbjct: 517 IKAGFTPC-VTTYNALLNALARRGDWEAAESVILDMKSKGFKPNETS 562
>gi|18415314|ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334186696|ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis thaliana]
gi|332658782|gb|AEE84182.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658783|gb|AEE84183.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 95/213 (44%), Gaps = 14/213 (6%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY+ ++ A+ TE+ +E F+ + N+ N ++YN ++ Y G++ + E++
Sbjct: 612 TYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDM 671
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K K + P+ TY I + +++ K +EM + G + Y L++ Y
Sbjct: 672 KHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRME-GLEPNVFHYTALIDGYGKLGQ 730
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR---MTKQKMTSR 222
+V E L E ITY +I YA GN + ++ +R + +T +
Sbjct: 731 MVKVE-CLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYK 789
Query: 223 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDF 255
+I G+LK+ G +++ +K S ++
Sbjct: 790 EFI--------YGYLKQ-GGVLEAFKGSDEENY 813
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 63/129 (48%), Gaps = 1/129 (0%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
+ S TYT+L+ + E+A+ LFE ++ L N Y ++ Y +GQ+ KV
Sbjct: 677 SPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVEC 736
Query: 101 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
++ E+ KNV P+ TY + I A N+ + + L+EM + G D + Y + Y
Sbjct: 737 LLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMR-EKGIVPDSITYKEFIYGY 795
Query: 161 ITASHLVNA 169
+ ++ A
Sbjct: 796 LKQGGVLEA 804
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 96/204 (47%), Gaps = 10/204 (4%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
+T ++ + E+A +LF +++++ ++ N + +N ++ G+ ++ + E++
Sbjct: 263 FTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMV 322
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
+ + P + TY++ + I L EM+ G + + Y NL++ +I A L
Sbjct: 323 ERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMT-KKGFPPNVIVYNNLIDSFIEAGSL 381
Query: 167 VNA--ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK---SLRMTKQKMTS 221
A +V S+T TY+ LI Y G D +++ K S+ + +
Sbjct: 382 NKAIEIKDLMVSKGLSLTSS---TYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSF 438
Query: 222 RNYICILSSYLML-GHLKEVGEII 244
+ IC+L S+LM L+ VGE++
Sbjct: 439 TSVICLLCSHLMFDSALRFVGEML 462
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 86/195 (44%), Gaps = 2/195 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+Y L+ G K ++A + + + L + Y+ ++ ++ +VE+ ++
Sbjct: 542 SYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDC 601
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
KR ++PD++TY++ I C ++ ++F DEM + V Y +L+ Y +
Sbjct: 602 KRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMM-SKNVQPNTVVYNHLIRAYCRSGR 660
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
L A K I+ TY LI + + ++ +++ +RM + +Y
Sbjct: 661 LSMALELREDMKHKGISPNSA-TYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYT 719
Query: 226 CILSSYLMLGHLKEV 240
++ Y LG + +V
Sbjct: 720 ALIDGYGKLGQMVKV 734
>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 624
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 83/171 (48%), Gaps = 2/171 (1%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 102
T ETYT+L+ ++ +AEE F++ + + + +M+N ++ + G +++ ++
Sbjct: 426 TVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLL 485
Query: 103 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 162
+E+ VVPD T+N + +++ KK LDEM + G D + Y L++ Y
Sbjct: 486 KEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMK-ERGIKPDHISYNTLISGYSK 544
Query: 163 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 213
+ +A E +TY+ LI Y+ +G D +++ + ++
Sbjct: 545 RGDMKDA-LEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQ 594
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 79/181 (43%), Gaps = 7/181 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY +++ Y E A ++F+ +K NL + YN ++ ++E+ + V+ ++
Sbjct: 254 TYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKL 313
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+VP+ TYN I C ++D+ + DEM + G Y L++
Sbjct: 314 LESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMM-NRGIVASVFTYNLLIHALFLEKR 372
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKI-----DQIWKSLRMTKQKMT 220
+ AE EK + + +TY+ I Y GN K + + K++R T + T
Sbjct: 373 IEEAEDMIKEMREKGV-EPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYT 431
Query: 221 S 221
S
Sbjct: 432 S 432
Score = 41.2 bits (95), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Query: 57 AKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFT 116
KW +KA++ ++ + N + YN ++ Y G+ E + + + +K KN+ PD +T
Sbjct: 231 GKW-KKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYT 289
Query: 117 YNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 158
YN +IS I++ L ++ +SG + V Y L++
Sbjct: 290 YNSFISRLCKERRIEEASGVLCKL-LESGLVPNAVTYNALID 330
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 46/246 (18%), Positives = 92/246 (37%), Gaps = 37/246 (15%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L+H K E+AE++ + +++ + + + YN + Y G +K + +E+
Sbjct: 359 TYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEM 418
Query: 106 KRKNV-----------------------------------VPDIFTYNLWISSCAATLNI 130
KN+ +PDI +N I NI
Sbjct: 419 VEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNI 478
Query: 131 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 190
D+ + L EM ++ D V + L+ Y + A+ L E ++ + I+Y+
Sbjct: 479 DRAFQLLKEMD-NAKVVPDEVTFNTLMQGYCRERKVEEAK-KLLDEMKERGIKPDHISYN 536
Query: 191 FLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQS 250
LI Y+ G+ +++ + T Y ++ Y +G E++ + +
Sbjct: 537 TLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSK 596
Query: 251 ATSDFD 256
+ D
Sbjct: 597 GITPDD 602
>gi|147778634|emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]
Length = 1494
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 113/257 (43%), Gaps = 13/257 (5%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG-QVEKVA 99
T + Y A++ +YA K +EL + ++ + + +N ++ + G V +A
Sbjct: 251 GNTVQVYNAMMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARLKSGTMVTNLA 310
Query: 100 L-VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 158
+ ++ E++R + PDI TYN IS+C+ N+++ K ++M D W Y +++
Sbjct: 311 IELLNEVRRSGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWT-YNAMIS 369
Query: 159 IYITASHLVNAESSTLV-EAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK---SLRM 214
+Y ++ E+ L + E +TY+ L+ +A GN DK+ +I + +
Sbjct: 370 VYGRCG--MSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGF 427
Query: 215 TKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTE 274
K +MT Y I+ Y G ++ K S S D L+ + + +
Sbjct: 428 GKDEMT---YNTIIHMYGKRGQHDLAFQLYSDMKLSGRSP-DAVTYTVLIDSLGKANMIK 483
Query: 275 KANEFHMLLLQKNCAPT 291
+A E +L PT
Sbjct: 484 EAAEVMSEMLNAXVKPT 500
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/215 (17%), Positives = 101/215 (46%), Gaps = 3/215 (1%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
+ ++L LY G +K ++++ ++++ L + YN ++ +Y + E+ ++ E++
Sbjct: 957 WNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMR 1016
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
R + P + TY IS+ ++Q ++ + + D ++ ++ ++ + +
Sbjct: 1017 RVGLEPKLDTYKSLISAFGKLQMVEQAEELFEGLLSKECKLDRSFYHI-MMKMFRNSGNH 1075
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 226
AE V E + + T L++ Y+G G ++ +++ +L++ +++ Y
Sbjct: 1076 SKAEKLLGVMKEAGV-EPTIATMHLLMVSYSGSGQPEEAEKVLDNLKVEGLPLSTLPYSS 1134
Query: 227 ILSSYLMLG-HLKEVGEIIDQWKQSATSDFDISAC 260
++ +YL G H + ++++ K D I C
Sbjct: 1135 VIDAYLKNGDHNVAIQKLMEMKKDGLEPDHRIWTC 1169
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 47/244 (19%), Positives = 105/244 (43%), Gaps = 3/244 (1%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
+ + AL+H YA + E+A +F + + S N +M + G+++++ +V++E
Sbjct: 815 KVWNALIHAYAASGCYERARAIFNTMMRDGPSPTVDSVNGLMQALIVDGRLDELYVVIQE 874
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
++ + L + + A NI +VKK M +G Y ++ +
Sbjct: 875 LQDMGFKISKSSITLMLDAFAHAGNIFEVKKIYQGMKA-AGYFPTMHLYRIMIGLLAKGK 933
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
+ + E + + E E + + ++ ++ LY G+G+ K Q+++ ++ K Y
Sbjct: 934 RVRDVE-AMVSEMEVAXFKPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTY 992
Query: 225 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 284
++ Y +E ++ + ++ + L+ AF + + E+A E LL
Sbjct: 993 NTLILMYCRDRRPEEGLSLMHEMRRVGLEP-KLDTYKSLISAFGKLQMVEQAEELFEGLL 1051
Query: 285 QKNC 288
K C
Sbjct: 1052 SKEC 1055
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 37/209 (17%), Positives = 82/209 (39%), Gaps = 38/209 (18%)
Query: 82 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 141
YN M+++Y G + + ++++ K +PD TYN + + A N+D+VK+ ++M
Sbjct: 364 YNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMV 423
Query: 142 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 201
G D+ +TY+ +I +Y G
Sbjct: 424 KMGFGKDE-------------------------------------MTYNTIIHMYGKRGQ 446
Query: 202 KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 261
D Q++ ++++ + + Y ++ S +KE E++ + + + +
Sbjct: 447 HDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNAXVKP-TLRTFS 505
Query: 262 RLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
L+ ++ G +A E +L+ P
Sbjct: 506 ALICGYAKAGKRVEAEETFDCMLRSGIKP 534
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 58/117 (49%), Gaps = 1/117 (0%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
+TY +L+ + + E+AEELFE + + Y+ MM ++ + G K ++
Sbjct: 1025 DTYKSLISAFGKLQMVEQAEELFEGLLSKECKLDRSFYHIMMKMFRNSGNHSKAEKLLGV 1084
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 161
+K V P I T +L + S + + ++ +K LD + + G + Y ++++ Y+
Sbjct: 1085 MKEAGVEPTIATMHLLMVSYSGSGQPEEAEKVLDNLKVE-GLPLSTLPYSSVIDAYL 1140
Score = 37.0 bits (84), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 45/246 (18%), Positives = 96/246 (39%), Gaps = 8/246 (3%)
Query: 7 FVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAE 64
F +S S +D I ++ ++G+ + T Y ++ L A K E
Sbjct: 880 FKISKSSITLMLDAFAHAGNIFEVKKIYQGMKAAGYFPTMHLYRIMIGLLAKGKRVRDVE 939
Query: 65 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 124
+ ++ + + ++N ++ LY +G +K V + I+ + PD TYN I
Sbjct: 940 AMVSEMEVAXFKPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMY 999
Query: 125 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES--STLVEAEKSIT 182
++ + EM G Y +L++ + + AE L+ E +
Sbjct: 1000 CRDRRPEEGLSLMHEMR-RVGLEPKLDTYKSLISAFGKLQMVEQAEELFEGLLSKECKLD 1058
Query: 183 QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 242
+ Y ++ ++ GN K +++ ++ + T ++ SY G +E +
Sbjct: 1059 RS---FYHIMMKMFRNSGNHSKAEKLLGVMKEAGVEPTIATMHLLMVSYSGSGQPEEAEK 1115
Query: 243 IIDQWK 248
++D K
Sbjct: 1116 VLDNLK 1121
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 99/211 (46%), Gaps = 2/211 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L+ +KA +L++ + + N + Y+ ++ + GQVE ++E+
Sbjct: 438 TYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEM 497
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K ++P+I TYN I + N+ + +KFL +M + S D + Y L++ YI
Sbjct: 498 INKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNK-VSPDLITYNTLIHGYIKEDK 556
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ +A L EK Q +TY+ LI ++ GN + I++ + + Y+
Sbjct: 557 MHDA-FKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYM 615
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFD 256
+++ ++ G+ KE ++ D+ Q + D
Sbjct: 616 SMINGHVTAGNSKEAFQLHDEMLQRGFAPDD 646
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 60/124 (48%), Gaps = 1/124 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY ++L + +KA E+F+ + ++ + + ++ + VG++E+ + +E+
Sbjct: 228 TYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEM 287
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ + + PD+ +++ I A +D +L EM C G D V Y ++ + A
Sbjct: 288 RHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRC-FGLVPDGVIYTMVIGGFCRAGL 346
Query: 166 LVNA 169
+ +A
Sbjct: 347 MSDA 350
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 77/173 (44%), Gaps = 4/173 (2%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
A ++T L+ + E+A ++++ ++ + + + ++ ++ L+ G+++
Sbjct: 258 APDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMA 317
Query: 101 VVEEIKRKNVVPDIFTYNLWISS-CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 159
+ E++ +VPD Y + I C A L D + + DEM G D V Y L+N
Sbjct: 318 YLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDAL-RVRDEM-VGCGCLPDVVTYNTLLNG 375
Query: 160 YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 212
L++AE L E + T+ LI Y G DK Q++ ++
Sbjct: 376 LCKERRLLDAE-GLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTM 427
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 44/248 (17%), Positives = 97/248 (39%), Gaps = 9/248 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+++ L+ L+A + A ++ L + ++Y ++ + G + V +E+
Sbjct: 298 SFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEM 357
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+PD+ TYN ++ + + L+EM + G D + L++ Y
Sbjct: 358 VGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMR-ERGVPPDLCTFTTLIHGYCIEGK 416
Query: 166 LVNAESSTLVEAEKSITQR---QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 222
L A L + + QR +TY+ LI G+ DK + +W + +
Sbjct: 417 LDKA----LQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHV 472
Query: 223 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 282
Y ++ S+ G +++ +D+ +I N ++ + G K +F
Sbjct: 473 TYSILIDSHCEKGQVEDAFGFLDEMINKGILP-NIMTYNSIIKGYCRSGNVSKGQKFLQK 531
Query: 283 LLQKNCAP 290
++ +P
Sbjct: 532 MMVNKVSP 539
Score = 40.4 bits (93), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 54/283 (19%), Positives = 111/283 (39%), Gaps = 40/283 (14%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY LL+ + AE L +++ + + + ++ Y G+++K + + +
Sbjct: 368 TYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTM 427
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM------------------SCDSGGS 147
+ + PDI TYN I ++D+ D+M C+ G
Sbjct: 428 LNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQV 487
Query: 148 DDWVKYVN-------LVNIYITASHLVNAESSTLVEAEKSITQR--------QWITYDFL 192
+D +++ L NI S + S V + Q+ ITY+ L
Sbjct: 488 EDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTL 547
Query: 193 IILYAGLGNKDKIDQIWKSLRMTKQKMTSRN---YICILSSYLMLGHLKEVGEIIDQWKQ 249
I G +DK+ +K L M +++ + Y +++ + + G+++E G I ++
Sbjct: 548 I---HGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCA 604
Query: 250 SATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 292
D ++ G +++A + H +LQ+ AP +
Sbjct: 605 KGIEP-DRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPDD 646
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 44/234 (18%), Positives = 89/234 (38%), Gaps = 3/234 (1%)
Query: 57 AKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFT 116
A W A + + V SN N N M+ Y + +KV V+ E++++ V PD+ T
Sbjct: 134 AGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVT 193
Query: 117 YNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVE 176
+N+ + + + + +D M S G + N V + S + + E
Sbjct: 194 HNVMVDARFRAGDAEAAMALVDSMV--SKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKE 251
Query: 177 AEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGH 236
+ ++ LI + +G ++ +I+K +R K ++ C++ + G
Sbjct: 252 MDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGK 311
Query: 237 LKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
+ + + + D ++G F GL A ++ C P
Sbjct: 312 MDHAMAYLREMRCFGLVP-DGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLP 364
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 25/125 (20%), Positives = 56/125 (44%), Gaps = 2/125 (1%)
Query: 27 IHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNE 84
+ G+++ + + ++ + + TY L+H Y A +L +++ + + + YN
Sbjct: 522 VSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNM 581
Query: 85 MMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS 144
++ + G V++ + E++ K + PD +TY I+ N + + DEM
Sbjct: 582 LINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRG 641
Query: 145 GGSDD 149
DD
Sbjct: 642 FAPDD 646
>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Vitis vinifera]
Length = 665
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 102/244 (41%), Gaps = 3/244 (1%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
YT L+ G +AE +F ++ S + N YN MM Y + V+K + +E+
Sbjct: 231 YTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEML 290
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
++P++ T+ + I T + +KFL +M+ G + Y L++ Y A +L
Sbjct: 291 GDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMA-SFGVVPNIFVYNCLIDGYCKAGNL 349
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 226
A S E EK TY LI G+ ++ D + + ++ + Y
Sbjct: 350 SEA-LSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNT 408
Query: 227 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 286
++ Y G++++ E+ Q + +I + L+ + G E A + ++ K
Sbjct: 409 LIDGYCKEGNMEKAIEVCSQMTEKGIEP-NIITFSTLIDGYCKAGKMEAAMGLYTEMVIK 467
Query: 287 NCAP 290
P
Sbjct: 468 GLLP 471
Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 50/113 (44%), Gaps = 1/113 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY+ L+ G E+A+ L + +K+ NA+ YN ++ Y G +EK V ++
Sbjct: 370 TYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQM 429
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 158
K + P+I T++ I ++ EM G D V Y L++
Sbjct: 430 TEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVI-KGLLPDVVAYTALID 481
>gi|302758166|ref|XP_002962506.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
gi|300169367|gb|EFJ35969.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
Length = 807
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/280 (20%), Positives = 117/280 (41%), Gaps = 10/280 (3%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQS 73
Y I+ + K + ER + +P+ T YT+++ + A KA L E +K+
Sbjct: 229 YTVVINGLVKAGKVAEAERVLQEMPVP--TLANYTSVIGGHCKAGDMGKAYHLLEDMKRK 286
Query: 74 NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQV 133
+ L YN ++ + + ++++ ++EE+K + VPDIFTY++ I+ + +
Sbjct: 287 GYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDILIAGLCRAKRLSEA 346
Query: 134 KKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLI 193
+ L + + + + V Y L++ + A+ VN +E + +TY LI
Sbjct: 347 RDLLGTLRNEDDCTPNVVSYNTLIDGFSKAAR-VNDAYQLFLEMVTAGQHPDVVTYSTLI 405
Query: 194 ILYAGLGNKDKIDQIWKSL-RMTKQKMTSR--NYICILSSYLMLGHLKEVGEIIDQWKQS 250
GL N + + L M +K+ + Y ++S G L + D +
Sbjct: 406 ---RGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVAN 462
Query: 251 ATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
+++ N L+ G A + ++ C+P
Sbjct: 463 GCQP-NLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSP 501
>gi|168012346|ref|XP_001758863.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690000|gb|EDQ76369.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 367
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/234 (19%), Positives = 103/234 (44%), Gaps = 3/234 (1%)
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
E AE++F ++K++ + YN ++++ G E+ + E++R VVP+I T+N
Sbjct: 98 ETAEKIFSKIKENGILPRVETYNTLLSVLSRGGHTERCKELEIEMQRLEVVPNIITFNTL 157
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
+ + + + + D+G V Y LV +Y AS A +E +
Sbjct: 158 LMMHVQGGRLKEAAEVYQRI-LDAGLKPTVVTYTGLVQMYCRASKHKEA-IEVFLEMRRV 215
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 240
+ + Y +I +Y G+ ++ +++ L+ + C++ ++ G ++E+
Sbjct: 216 GCKPDLMIYSLMISVYGKAGSAEEAALVFRQLQNDGYIPNVVTWCCLIQAFGWQGKMQEI 275
Query: 241 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
G ++ S D++ N ++GA+ G + +A + + +P S
Sbjct: 276 GAFFNEMLASGCLP-DLTLYNVMMGAYGRYGHSVQAAILFRRMQAQGISPNAVS 328
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 62/128 (48%), Gaps = 1/128 (0%)
Query: 42 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 101
T TYT L+ +Y A ++A E+F +++ + ++Y+ M+++Y G E+ ALV
Sbjct: 184 PTVVTYTGLVQMYCRASKHKEAIEVFLEMRRVGCKPDLMIYSLMISVYGKAGSAEEAALV 243
Query: 102 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 161
+++ +P++ T+ I + + ++ F +EM SG D Y ++ Y
Sbjct: 244 FRQLQNDGYIPNVVTWCCLIQAFGWQGKMQEIGAFFNEM-LASGCLPDLTLYNVMMGAYG 302
Query: 162 TASHLVNA 169
H V A
Sbjct: 303 RYGHSVQA 310
>gi|225445998|ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940
[Vitis vinifera]
gi|297735424|emb|CBI17864.3| unnamed protein product [Vitis vinifera]
Length = 821
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 113/255 (44%), Gaps = 12/255 (4%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV-EKVALVVE 103
+T +LH Y+ E+A +FE+++++ LS + YN M+ +Y +G+ K+ +++
Sbjct: 210 RAWTTILHAYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLD 269
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
E++ + D FT + IS+C +D+ +KF + + G Y +L+ ++ A
Sbjct: 270 EMRSNGLEFDEFTCSTVISACGREGLLDEARKFFARLKSE-GYVAGTFTYNSLLQVFGKA 328
Query: 164 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG----NKDKIDQIWKSLRMTKQKM 219
+ + S L E EK+ +TY+ L+ Y G D ID + + M
Sbjct: 329 G-IYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMP---- 383
Query: 220 TSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 279
+ Y ++++Y G + Q K+S ++ N +LG E+ +
Sbjct: 384 NAITYTTVINAYGKAGKEDKALSFFRQMKESGCVP-NVCTYNAILGMLGKKSRLEEMIDM 442
Query: 280 HMLLLQKNCAPTNAS 294
+ CAP + +
Sbjct: 443 LCDMRSNGCAPNSVT 457
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 101/246 (41%), Gaps = 5/246 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY ALL+ A E AE + +K N Y+ M+ Y G + + EEI
Sbjct: 527 TYNALLNALARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEI 586
Query: 106 KRKNVVPD-IFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
++ P I L +++ + + F + C G D V + ++++I+ +
Sbjct: 587 YNGHIFPSWILLRTLVLANFKRRALMGMERAFQE--FCKHGYKPDLVLFNSMLSIF-AKN 643
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
+ + L +S Q +TY+ L+ +YA G K ++I K ++ + K +Y
Sbjct: 644 KMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEILKGIQKSGGKPDLVSY 703
Query: 225 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 284
++ + G ++E + + S I N + +S G+ + E ++
Sbjct: 704 NTVIKGFCRQGLMQEAIRTLSEMTISGIRPC-IVTYNTFVAGYSGKGMFSEVEEVISYMI 762
Query: 285 QKNCAP 290
Q +C P
Sbjct: 763 QHDCRP 768
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/287 (18%), Positives = 120/287 (41%), Gaps = 10/287 (3%)
Query: 8 VLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELF 67
V+S +D K F E Y G + TY +LL ++ A +A +
Sbjct: 286 VISACGREGLLDEARKFFARLKSEGYVAG-------TFTYNSLLQVFGKAGIYSEALSIL 338
Query: 68 ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAAT 127
+ ++++N + + YNE++ Y+ G E+ A ++ + RK ++P+ TY I++
Sbjct: 339 KEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKA 398
Query: 128 LNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWI 187
D+ F +M +SG + Y ++ + S L L + + +
Sbjct: 399 GKEDKALSFFRQMK-ESGCVPNVCTYNAILGMLGKKSRL-EEMIDMLCDMRSNGCAPNSV 456
Query: 188 TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQW 247
T++ ++ + G ++++++ ++ + + ++ +Y G +V ++ ++
Sbjct: 457 TWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEM 516
Query: 248 KQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
++ + ++ N LL A + G E A + + K P S
Sbjct: 517 IKAGFTPC-VTTYNALLNALARRGDWEAAESVILDMKSKGFKPNETS 562
>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1246
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 109/248 (43%), Gaps = 9/248 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT L+ A +KA+EL+ +++ S+ S + + Y +M + VG +E V E+
Sbjct: 307 TYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEM 366
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ PD+ TY + I + + ++D+ LD M+ G + Y ++ + A
Sbjct: 367 EVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMT-TKGIFPNLHTYNTMICGLLKARR 425
Query: 166 LVNAESSTLVEAEKSI-TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
L E+ L+E +S+ + +Y I Y G+ K +++ M K+ +
Sbjct: 426 L--DEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFET--MKKRGIMPSIA 481
Query: 225 ICILSSYLM--LGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 282
C S Y + G + E +I + + S D N L+ +S G +KA +
Sbjct: 482 ACNASLYTLAETGRISEAEDIFNDLHKCGLSP-DSVTYNMLMKCYSKAGQIDKATQLLSE 540
Query: 283 LLQKNCAP 290
++ K C P
Sbjct: 541 MISKGCEP 548
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 56/120 (46%), Gaps = 13/120 (10%)
Query: 13 DYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQ 72
D D TK GIH T E+Y L+ G+ +TEKA ELFE +K
Sbjct: 778 DAQNVFDKFTKNLGIHP-------------TLESYNCLMDGLLGSNFTEKALELFEDMKS 824
Query: 73 SNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQ 132
+ N YN ++ + ++ K+ + E++ + P+ T+N+ IS+ + N+++
Sbjct: 825 AGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNK 884
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/196 (18%), Positives = 91/196 (46%), Gaps = 2/196 (1%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
+ T TY L+ A +E+A ++FE + N+++YN ++ + G+++
Sbjct: 898 SPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACE 957
Query: 101 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
+ +++ ++ + PD+ +Y + + T ID+ ++ +E+ +G D V Y ++N
Sbjct: 958 LFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKL-TGLDPDTVSYNFIIN-G 1015
Query: 161 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 220
+ S ++ S E + TY+ LI+ G D ++++ L++ + +
Sbjct: 1016 LGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPS 1075
Query: 221 SRNYICILSSYLMLGH 236
Y ++ + + G+
Sbjct: 1076 VFTYNALIRGHSLSGN 1091
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 74/174 (42%), Gaps = 4/174 (2%)
Query: 5 KEFVLSD-SDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSET--YTALLHLYAGAKWTE 61
KE + D Y ++ + I +YFE L L+ +T Y +++ ++ +
Sbjct: 964 KEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLD 1023
Query: 62 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 121
+A LF +K +S + YN ++ G+V+ + EE++ + P +FTYN I
Sbjct: 1024 EALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALI 1083
Query: 122 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLV 175
+ + N DQ +M G S + + L N Y A + N + +
Sbjct: 1084 RGHSLSGNKDQAFSVFKKMMV-VGCSPNTETFAQLPNKYPRAGLVHNPFGAVFI 1136
Score = 44.7 bits (104), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 88/209 (42%), Gaps = 4/209 (1%)
Query: 6 EFVLSDSDYATRIDLMTKVFGIHSGERYFEGLP--LSAKTSETYTALLHLYAGAKWTEKA 63
+F + Y ID + K + FE + S Y L++ + + + A
Sbjct: 896 DFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFA 955
Query: 64 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 123
ELF+++ + + + Y ++ G++++ EE+K + PD +YN I+
Sbjct: 956 CELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIING 1015
Query: 124 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQ 183
+ +D+ EM + G S D Y L+ +++ + V+ E + +
Sbjct: 1016 LGKSRRLDEALSLFSEMK-NRGISPDLYTYNALI-LHLGIAGKVDVAVKMYEELQLVGLE 1073
Query: 184 RQWITYDFLIILYAGLGNKDKIDQIWKSL 212
TY+ LI ++ GNKD+ ++K +
Sbjct: 1074 PSVFTYNALIRGHSLSGNKDQAFSVFKKM 1102
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%)
Query: 49 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 108
A L+ A +AE++F + + LS +++ YN +M Y GQ++K ++ E+ K
Sbjct: 485 ASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISK 544
Query: 109 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
PD+ N I++ +D K +
Sbjct: 545 GCEPDVMIINSLINTLYKAGRVDAAWKMFGRL 576
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 100/242 (41%), Gaps = 13/242 (5%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT + A+ + A +F+ + + + Y ++ + G+++K + ++
Sbjct: 272 TYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKM 331
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ + PD TY + +++ VK+F +EM D G + D V Y L+ +
Sbjct: 332 RASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVD-GYAPDVVTYTILIEALCKSGD 390
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKID---QIWKSLRMTKQKMTSR 222
+ A V K I TY+ +I GL ++D ++ +++ K T+
Sbjct: 391 VDRAFDMLDVMTTKGIFPNLH-TYNTMI---CGLLKARRLDEALELLENMESLGVKPTAF 446
Query: 223 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA----NE 278
+Y+ + Y G + + + K+ I+ACN L ++ G +A N+
Sbjct: 447 SYVLFIDYYGKSGDPAKAIDTFETMKKRGIMP-SIAACNASLYTLAETGRISEAEDIFND 505
Query: 279 FH 280
H
Sbjct: 506 LH 507
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 68/160 (42%), Gaps = 2/160 (1%)
Query: 2 VTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTS-ETYTALLHLYAGAKWT 60
+T F+L+ Y I L+ F + + Y + K S +TY+AL+ T
Sbjct: 192 MTEVGFILNAYSYNGLIHLLLPGFCNEALKVYKRMISEGMKPSMKTYSALMVALGRRGDT 251
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
K L E +K L N Y + +++ + +E+ + PD+ TY +
Sbjct: 252 RKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVL 311
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
I + A +D+ K+ +M S S D V Y+ L++ +
Sbjct: 312 IDALCAAGKLDKAKELYVKMRASS-HSPDRVTYITLMDKF 350
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 69/165 (41%), Gaps = 7/165 (4%)
Query: 42 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 101
T+ +Y + Y + KA + FE +K+ + + N + G++ + +
Sbjct: 443 PTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDI 502
Query: 102 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN-LVNIY 160
++ + + PD TYN+ + + ID+ + L EM S G + V +N L+N
Sbjct: 503 FNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMI--SKGCEPDVMIINSLINTL 560
Query: 161 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKI 205
A V+A + +TY+ IL GLG + KI
Sbjct: 561 YKAGR-VDAAWKMFGRLKNLKLAPTVVTYN---ILLTGLGKEGKI 601
>gi|168033824|ref|XP_001769414.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679334|gb|EDQ65783.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 410
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 84/195 (43%), Gaps = 2/195 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+YT +++ + ++A ELFE +K+ S N+ YN ++ Y G+ EK + +
Sbjct: 173 SYTTMINSLGRSGRLDEAVELFEEMKELGRSPNSWTYNSLLKAYAREGRYEKAMCLFVGM 232
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ + +PD++TYN I C + + EM G + D V Y +++ Y S
Sbjct: 233 EDEGCIPDLYTYNTVIDMCGRGGLFAEAEGVFLEMQ-RKGCTPDRVTYNTMLDAYSKWSR 291
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
A T W TY+ L+ G+ + QI+ L+ ++
Sbjct: 292 RGRARDLLKTMKRAGCTPDLW-TYNILLDAAGKAGSASEAMQIFHELKAAGHSPNLVSFS 350
Query: 226 CILSSYLMLGHLKEV 240
+++ Y LG+ +E
Sbjct: 351 ALINMYGRLGYFEEA 365
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 95/214 (44%), Gaps = 25/214 (11%)
Query: 4 HKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLS--AKTSETYTALLHLYAGAKWTE 61
H E+ L + + T I ++ + + FEG+ + A + YTALL YA +
Sbjct: 23 HLEYELKEHNCVTIISILGREGKLGLAREIFEGMSKAGVAPSVHAYTALLSGYAKQGLLK 82
Query: 62 KAEELFERVKQSNLSFNALMYNEMMTLYMSVG-QVEKVALVVEEIKRKNVVPDIFTYNLW 120
+A LFE +K+ S N L YN ++ ++ + + EE+K+ V P+ TYN
Sbjct: 83 EAWALFEAMKEKGCSPNVLTYNTLINACTKRAYRLPDLVGLFEEMKQAGVQPNDITYNCM 142
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA--------ESS 172
+++C D + L EM K VN + I+ + ++N+ E+
Sbjct: 143 VNACVCLSLFDTASQILKEM-----------KAVNCLPNVISYTTMINSLGRSGRLDEAV 191
Query: 173 TLVEAEKSI--TQRQWITYDFLIILYAGLGNKDK 204
L E K + + W TY+ L+ YA G +K
Sbjct: 192 ELFEEMKELGRSPNSW-TYNSLLKAYAREGRYEK 224
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 81/201 (40%), Gaps = 8/201 (3%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
+ S TY +LL YA EKA LF ++ + YN ++ + G +
Sbjct: 203 SPNSWTYNSLLKAYAREGRYEKAMCLFVGMEDEGCIPDLYTYNTVIDMCGRGGLFAEAEG 262
Query: 101 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
V E++RK PD TYN + + + + + L M D W NI
Sbjct: 263 VFLEMQRKGCTPDRVTYNTMLDAYSKWSRRGRARDLLKTMKRAGCTPDLWT-----YNIL 317
Query: 161 ITASHLVNAESSTLV---EAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 217
+ A+ + S + E + + +++ LI +Y LG ++ ++ W +R T
Sbjct: 318 LDAAGKAGSASEAMQIFHELKAAGHSPNLVSFSALINMYGRLGYFEEAERAWVEMRATGC 377
Query: 218 KMTSRNYICILSSYLMLGHLK 238
+ Y +++SY G K
Sbjct: 378 VPNATAYCGLMNSYSHHGMYK 398
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 45/229 (19%), Positives = 97/229 (42%), Gaps = 4/229 (1%)
Query: 63 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 122
A E+FE + ++ ++ + Y +++ Y G +++ + E +K K P++ TYN I+
Sbjct: 49 AREIFEGMSKAGVAPSVHAYTALLSGYAKQGLLKEAWALFEAMKEKGCSPNVLTYNTLIN 108
Query: 123 SCAA-TLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI 181
+C + + +EM +G + + Y +VN + S L + S L E +
Sbjct: 109 ACTKRAYRLPDLVGLFEEMK-QAGVQPNDITYNCMVNACVCLS-LFDTASQILKEMKAVN 166
Query: 182 TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVG 241
I+Y +I G D+ ++++ ++ + S Y +L +Y G ++
Sbjct: 167 CLPNVISYTTMINSLGRSGRLDEAVELFEEMKELGRSPNSWTYNSLLKAYAREGRYEKAM 226
Query: 242 EIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
+ + D+ N ++ GL +A + + +K C P
Sbjct: 227 CLFVGMEDEGCIP-DLYTYNTVIDMCGRGGLFAEAEGVFLEMQRKGCTP 274
>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
gi|194702156|gb|ACF85162.1| unknown [Zea mays]
gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
Length = 567
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 102/247 (41%), Gaps = 12/247 (4%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y A++ Y GA + A L V + +A YN ++ G+ V+E++
Sbjct: 137 YNAMVAGYCGAGQLDAARRL---VADMPVEPDAYTYNTLIRGLCGRGRTSNALAVLEDMF 193
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
R+ +PD+ TY + + + Q K LDEM D G + D V Y N+V I
Sbjct: 194 RRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMH-DKGCAPDIVTY-NVVLNGICQEGR 251
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 226
V L + ++Y+ I+ GL ++ + K + K N +
Sbjct: 252 VEDAMEFLKNLPSYGCEPNTVSYN---IVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVT 308
Query: 227 --ILSSYLMLGHLKEVG-EIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 283
+L S+L L E E+++Q Q + +S N LL AF KA EF L+
Sbjct: 309 FNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSY-NPLLHAFCKQKKIHKAMEFVELM 367
Query: 284 LQKNCAP 290
+ + C P
Sbjct: 368 VSRGCYP 374
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 71/166 (42%), Gaps = 5/166 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+ L+ E A E+ E++ Q + N+L YN ++ + ++ K VE +
Sbjct: 308 TFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELM 367
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ PDI +YN +++ +D + L ++ D G S + Y N V +T +
Sbjct: 368 VSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLK-DKGCSPVLISY-NTVIDGLTKAG 425
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKS 211
L E Q ITY + +GL +D+I++ ++
Sbjct: 426 KTKEALELLDEMTSKGLQPDIITYS---TIASGLCREDRIEEAVRT 468
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 47/110 (42%), Gaps = 1/110 (0%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
S +Y LLH + K KA E E + + + YN ++T G+V+ ++
Sbjct: 341 SLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLH 400
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKY 153
++K K P + +YN I + + LDEM+ G D + Y
Sbjct: 401 QLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMT-SKGLQPDIITY 449
>gi|223635621|sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g19440, chloroplastic; Flags: Precursor
Length = 838
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 95/213 (44%), Gaps = 14/213 (6%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY+ ++ A+ TE+ +E F+ + N+ N ++YN ++ Y G++ + E++
Sbjct: 625 TYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDM 684
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K K + P+ TY I + +++ K +EM + G + Y L++ Y
Sbjct: 685 KHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRME-GLEPNVFHYTALIDGYGKLGQ 743
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR---MTKQKMTSR 222
+V E L E ITY +I YA GN + ++ +R + +T +
Sbjct: 744 MVKVE-CLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYK 802
Query: 223 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDF 255
+I G+LK+ G +++ +K S ++
Sbjct: 803 EFI--------YGYLKQ-GGVLEAFKGSDEENY 826
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 63/129 (48%), Gaps = 1/129 (0%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
+ S TYT+L+ + E+A+ LFE ++ L N Y ++ Y +GQ+ KV
Sbjct: 690 SPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVEC 749
Query: 101 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
++ E+ KNV P+ TY + I A N+ + + L+EM + G D + Y + Y
Sbjct: 750 LLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMR-EKGIVPDSITYKEFIYGY 808
Query: 161 ITASHLVNA 169
+ ++ A
Sbjct: 809 LKQGGVLEA 817
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 96/204 (47%), Gaps = 10/204 (4%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
+T ++ + E+A +LF +++++ ++ N + +N ++ G+ ++ + E++
Sbjct: 276 FTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMV 335
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
+ + P + TY++ + I L EM+ G + + Y NL++ +I A L
Sbjct: 336 ERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMT-KKGFPPNVIVYNNLIDSFIEAGSL 394
Query: 167 VNA--ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK---SLRMTKQKMTS 221
A +V S+T TY+ LI Y G D +++ K S+ + +
Sbjct: 395 NKAIEIKDLMVSKGLSLTSS---TYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSF 451
Query: 222 RNYICILSSYLML-GHLKEVGEII 244
+ IC+L S+LM L+ VGE++
Sbjct: 452 TSVICLLCSHLMFDSALRFVGEML 475
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 86/195 (44%), Gaps = 2/195 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+Y L+ G K ++A + + + L + Y+ ++ ++ +VE+ ++
Sbjct: 555 SYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDC 614
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
KR ++PD++TY++ I C ++ ++F DEM + V Y +L+ Y +
Sbjct: 615 KRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMM-SKNVQPNTVVYNHLIRAYCRSGR 673
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
L A K I+ TY LI + + ++ +++ +RM + +Y
Sbjct: 674 LSMALELREDMKHKGISPNSA-TYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYT 732
Query: 226 CILSSYLMLGHLKEV 240
++ Y LG + +V
Sbjct: 733 ALIDGYGKLGQMVKV 747
>gi|3080374|emb|CAA18631.1| putative protein [Arabidopsis thaliana]
gi|7268739|emb|CAB78946.1| putative protein [Arabidopsis thaliana]
Length = 814
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 95/213 (44%), Gaps = 14/213 (6%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY+ ++ A+ TE+ +E F+ + N+ N ++YN ++ Y G++ + E++
Sbjct: 601 TYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDM 660
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K K + P+ TY I + +++ K +EM + G + Y L++ Y
Sbjct: 661 KHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRME-GLEPNVFHYTALIDGYGKLGQ 719
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR---MTKQKMTSR 222
+V E L E ITY +I YA GN + ++ +R + +T +
Sbjct: 720 MVKVE-CLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYK 778
Query: 223 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDF 255
+I G+LK+ G +++ +K S ++
Sbjct: 779 EFI--------YGYLKQ-GGVLEAFKGSDEENY 802
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 63/129 (48%), Gaps = 1/129 (0%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
+ S TYT+L+ + E+A+ LFE ++ L N Y ++ Y +GQ+ KV
Sbjct: 666 SPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVEC 725
Query: 101 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
++ E+ KNV P+ TY + I A N+ + + L+EM + G D + Y + Y
Sbjct: 726 LLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMR-EKGIVPDSITYKEFIYGY 784
Query: 161 ITASHLVNA 169
+ ++ A
Sbjct: 785 LKQGGVLEA 793
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 96/204 (47%), Gaps = 10/204 (4%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
+T ++ + E+A +LF +++++ ++ N + +N ++ G+ ++ + E++
Sbjct: 252 FTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMV 311
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
+ + P + TY++ + I L EM+ G + + Y NL++ +I A L
Sbjct: 312 ERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMT-KKGFPPNVIVYNNLIDSFIEAGSL 370
Query: 167 VNA--ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK---SLRMTKQKMTS 221
A +V S+T TY+ LI Y G D +++ K S+ + +
Sbjct: 371 NKAIEIKDLMVSKGLSLTSS---TYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSF 427
Query: 222 RNYICILSSYLML-GHLKEVGEII 244
+ IC+L S+LM L+ VGE++
Sbjct: 428 TSVICLLCSHLMFDSALRFVGEML 451
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 86/195 (44%), Gaps = 2/195 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+Y L+ G K ++A + + + L + Y+ ++ ++ +VE+ ++
Sbjct: 531 SYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDC 590
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
KR ++PD++TY++ I C ++ ++F DEM + V Y +L+ Y +
Sbjct: 591 KRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMM-SKNVQPNTVVYNHLIRAYCRSGR 649
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
L A K I+ TY LI + + ++ +++ +RM + +Y
Sbjct: 650 LSMALELREDMKHKGISPNSA-TYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYT 708
Query: 226 CILSSYLMLGHLKEV 240
++ Y LG + +V
Sbjct: 709 ALIDGYGKLGQMVKV 723
>gi|326504498|dbj|BAJ91081.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 793
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 111/249 (44%), Gaps = 11/249 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+ +LL +Y A+ ++A + + ++ + + YN +++ Y+ G +++ A + EE+
Sbjct: 286 TFNSLLDVYGKARMHDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEM 345
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ K + PD+ TY IS ID DEM +G + Y L+ + H
Sbjct: 346 EVKGIQPDVITYTTLISGLDRAGKIDAAIGTYDEM-LRNGCKPNLCTYNALIKL-----H 399
Query: 166 LVNAESSTLVEAEKSITQRQW----ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 221
V + ++ + + +T++ L+ ++ G ++ ++K ++ +
Sbjct: 400 GVRGKFPEMMAVFDDLRSAGFVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKSGYVPER 459
Query: 222 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 281
Y+ ++SSY G + EI + ++ DIS N +L A + G E+A +
Sbjct: 460 DTYVSLISSYSRCGLFDQSMEIYKRMIEAGIYP-DISTYNAVLSALARGGRWEQAEKLFA 518
Query: 282 LLLQKNCAP 290
+ +C P
Sbjct: 519 EMENLDCRP 527
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 71/145 (48%), Gaps = 3/145 (2%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 102
++ TY +L+H+Y+ EK E + +K S + YN M+ Y GQ+++ + +
Sbjct: 633 STATYNSLMHMYSRLGDCEKCENILTEIKSSGARPDRYSYNTMIYAYGRKGQMKEASRLF 692
Query: 103 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 162
E+K ++PDI TYN+++ S A ++ + M G + Y +++ Y
Sbjct: 693 SEMKSSGLIPDIVTYNIFVKSYVANSMFEEAIDLVRYM-VTRGCKPNERTYNSILQEYCR 751
Query: 163 ASHLVNAES--STLVEAEKSITQRQ 185
+ +A+S S L + I++++
Sbjct: 752 HGKIADAKSFLSNLPQLHPGISKQE 776
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 55/116 (47%), Gaps = 1/116 (0%)
Query: 49 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 108
A++ +Y + +K EE+ +K S+++ + YN +M +Y +G EK ++ EIK
Sbjct: 604 AMVSVYGKNRMVKKVEEILSLMKGSSINLSTATYNSLMHMYSRLGDCEKCENILTEIKSS 663
Query: 109 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
PD ++YN I + + + + EM SG D V Y V Y+ S
Sbjct: 664 GARPDRYSYNTMIYAYGRKGQMKEASRLFSEMK-SSGLIPDIVTYNIFVKSYVANS 718
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 70/158 (44%), Gaps = 3/158 (1%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV-EKVALVV 102
+ YTAL+ ++ A A +F R+ + + + YN ++ +Y + + V +V
Sbjct: 178 ASAYTALVSAFSRASRFRDAVAVFRRMVANGIQPAIVTYNVVLHVYSKIAVPWKDVVALV 237
Query: 103 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 162
+ +K + D +TYN IS C + K DEM +G D V + +L+++Y
Sbjct: 238 DSMKNDGIPLDRYTYNTLISCCRRGALYKEAAKVFDEMRA-AGFEPDKVTFNSLLDVYGK 296
Query: 163 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 200
A + + L E E +TY+ LI Y G
Sbjct: 297 A-RMHDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDG 333
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 49/249 (19%), Positives = 110/249 (44%), Gaps = 11/249 (4%)
Query: 46 TYTALLHLYA-GAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
TY A+L A G +W E+AE+LF ++ + + L Y+ ++ Y + +++K+ + E+
Sbjct: 496 TYNAVLSALARGGRW-EQAEKLFAEMENLDCRPDELSYSSLLHAYANAKKLDKMKALSED 554
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA- 163
I + + + + N+ + +K E+ D +N++N ++
Sbjct: 555 IYAEKIESHHGLVKTLVLVNSKVNNLSETEKAFLELGRRRCSLD-----INVLNAMVSVY 609
Query: 164 --SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 221
+ +V L + S TY+ L+ +Y+ LG+ +K + I ++ + +
Sbjct: 610 GKNRMVKKVEEILSLMKGSSINLSTATYNSLMHMYSRLGDCEKCENILTEIKSSGARPDR 669
Query: 222 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 281
+Y ++ +Y G +KE + + K S DI N + ++ + E+A +
Sbjct: 670 YSYNTMIYAYGRKGQMKEASRLFSEMKSSGLIP-DIVTYNIFVKSYVANSMFEEAIDLVR 728
Query: 282 LLLQKNCAP 290
++ + C P
Sbjct: 729 YMVTRGCKP 737
Score = 44.3 bits (103), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 51/259 (19%), Positives = 111/259 (42%), Gaps = 12/259 (4%)
Query: 35 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 94
+G+PL TY L+ ++A ++F+ ++ + + + +N ++ +Y
Sbjct: 243 DGIPLD---RYTYNTLISCCRRGALYKEAAKVFDEMRAAGFEPDKVTFNSLLDVYGKARM 299
Query: 95 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 154
++ V++E++ P + TYN ISS + + + +EM G D + Y
Sbjct: 300 HDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEV-KGIQPDVITYT 358
Query: 155 NLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM 214
L++ A ++A T E ++ + TY+ LI L+ G ++ ++ LR
Sbjct: 359 TLISGLDRAGK-IDAAIGTYDEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMAVFDDLRS 417
Query: 215 TKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA---TSDFDISACNRLLGAFSDVG 271
+ +L+ + G EV + + K+S D +S L+ ++S G
Sbjct: 418 AGFVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKSGYVPERDTYVS----LISSYSRCG 473
Query: 272 LTEKANEFHMLLLQKNCAP 290
L +++ E + +++ P
Sbjct: 474 LFDQSMEIYKRMIEAGIYP 492
>gi|295828268|gb|ADG37803.1| AT1G07590-like protein [Capsella grandiflora]
Length = 194
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 80/164 (48%), Gaps = 3/164 (1%)
Query: 80 LMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE 139
L+YN ++ + G+ + +A + +K +P + TY++ + A NID V K D
Sbjct: 20 LVYNRLIIRNSAPGRRKLIAKDLALMKADKAIPHVSTYHILMKLEANEHNIDGVLKAFDG 79
Query: 140 MSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGL 199
M +G + V Y + + A AE+ T E EKS+T W T D L+ILY L
Sbjct: 80 MK-KAGVEPNEVSYCIVAMAHAVARLYTVAEAYT-EEIEKSVTGDNWSTLDILMILYGRL 137
Query: 200 GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI 243
G + ++ + W +R + S++Y+ ++ +G+L E+
Sbjct: 138 GKEKELARTWNVIRGF-HHVRSKSYLLATEAFARVGNLDRAEEL 180
>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 554
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 109/252 (43%), Gaps = 20/252 (7%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
Y A++ Y GA + A L V + + +A YN ++ G+ V++E+
Sbjct: 128 AYNAMVAGYCGAGQLDAARRL---VAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEM 184
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
R+ VPD+ TY + + + Q K LDEM D G + D V Y +VN
Sbjct: 185 LRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMR-DKGCTPDIVTYNVVVNGICQEGR 243
Query: 166 LVNAESSTLVEAEKSIT----QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 221
+ +A +E K++ + ++Y+ I+ GL ++ + + + QK
Sbjct: 244 VDDA-----IEFLKNLPSYGCEPNTVSYN---IVLKGLCTAERWEDAEELMGEMGQKGCP 295
Query: 222 RNYIC--ILSSYLMLGHLKEVG-EIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 278
N + +L S+L L E E+++Q + + +S N LL AF +KA
Sbjct: 296 PNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSY-NPLLHAFCKQKKMDKAMA 354
Query: 279 FHMLLLQKNCAP 290
F L++ + C P
Sbjct: 355 FLDLMVSRGCYP 366
Score = 44.3 bits (103), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 1/112 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+Y +L A+ E AEEL + Q N + +N +++ G VE V+E+I
Sbjct: 265 SYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQI 324
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 157
+ P+ +YN + + +D+ FLD M G D V Y L+
Sbjct: 325 PKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMV-SRGCYPDIVSYNTLL 375
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 78/182 (42%), Gaps = 8/182 (4%)
Query: 30 GERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLY 89
GE +G P + T + L+ E A E+ E++ + + N+L YN ++ +
Sbjct: 287 GEMGQKGCPPNVVT---FNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAF 343
Query: 90 MSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDD 149
+++K ++ + + PDI +YN +++ + +D + L ++ D G +
Sbjct: 344 CKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLK-DKGCAPV 402
Query: 150 WVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIW 209
+ Y N V +T + L E Q ITY + AGL +D+I+
Sbjct: 403 LISY-NTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYS---TIAAGLCREDRIEDAI 458
Query: 210 KS 211
++
Sbjct: 459 RA 460
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 48/245 (19%), Positives = 93/245 (37%), Gaps = 3/245 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L+ G T A + + + + + + Y ++ ++ +++E+
Sbjct: 160 TYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEM 219
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ K PDI TYN+ ++ +D +FL + G + V Y ++ TA
Sbjct: 220 RDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLP-SYGCEPNTVSYNIVLKGLCTAER 278
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+AE + E + +T++ LI G + ++ + + S +Y
Sbjct: 279 WEDAE-ELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYN 337
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 285
+L ++ + + +D DI + N LL A G + A E L
Sbjct: 338 PLLHAFCKQKKMDKAMAFLDLMVSRGCYP-DIVSYNTLLTALCRSGEVDVAVELLHQLKD 396
Query: 286 KNCAP 290
K CAP
Sbjct: 397 KGCAP 401
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 97/206 (47%), Gaps = 2/206 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L+ +KA +L++ + + N + Y+ ++ + GQVE ++E+
Sbjct: 377 TYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEM 436
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K ++P+I TYN I + N+ + +KFL +M + S D + Y L++ YI
Sbjct: 437 INKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNK-VSPDLITYNTLIHGYIKEDK 495
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ +A L EK Q +TY+ LI ++ GN + I++ + + Y+
Sbjct: 496 MHDA-FKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYM 554
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSA 251
+++ ++ G+ KE ++ D+ Q
Sbjct: 555 SMINGHVTAGNSKEAFQLHDEMLQRG 580
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 60/124 (48%), Gaps = 1/124 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY ++L + +KA E+F+ + ++ + + ++ + VG++E+ + +E+
Sbjct: 167 TYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEM 226
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ + + PD+ +++ I A +D +L EM C G D V Y ++ + A
Sbjct: 227 RHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRC-FGLVPDGVIYTMVIGGFCRAGL 285
Query: 166 LVNA 169
+ +A
Sbjct: 286 MSDA 289
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 88/206 (42%), Gaps = 4/206 (1%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
A ++T L+ + E+A ++++ ++ + + + ++ ++ L+ G+++
Sbjct: 197 APDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMA 256
Query: 101 VVEEIKRKNVVPDIFTYNLWISS-CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 159
+ E++ +VPD Y + I C A L D + + DEM G D V Y L+N
Sbjct: 257 YLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDAL-RVRDEM-VGCGCLPDVVTYNTLLNG 314
Query: 160 YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 219
L++AE L E + T+ LI Y G DK Q++ ++ + +
Sbjct: 315 LCKERRLLDAE-GLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRP 373
Query: 220 TSRNYICILSSYLMLGHLKEVGEIID 245
Y ++ G L + ++ D
Sbjct: 374 DIVTYNTLIDGMCRQGDLDKANDLWD 399
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 44/248 (17%), Positives = 97/248 (39%), Gaps = 9/248 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+++ L+ L+A + A ++ L + ++Y ++ + G + V +E+
Sbjct: 237 SFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEM 296
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+PD+ TYN ++ + + L+EM + G D + L++ Y
Sbjct: 297 VGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMR-ERGVPPDLCTFTTLIHGYCIEGK 355
Query: 166 LVNAESSTLVEAEKSITQR---QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 222
L A L + + QR +TY+ LI G+ DK + +W + +
Sbjct: 356 LDKA----LQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHV 411
Query: 223 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 282
Y ++ S+ G +++ +D+ +I N ++ + G K +F
Sbjct: 412 TYSILIDSHCEKGQVEDAFGFLDEMINKGILP-NIMTYNSIIKGYCRSGNVSKGQKFLQK 470
Query: 283 LLQKNCAP 290
++ +P
Sbjct: 471 MMVNKVSP 478
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 44/234 (18%), Positives = 89/234 (38%), Gaps = 3/234 (1%)
Query: 57 AKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFT 116
A W A + + V SN N N M+ Y + +KV V+ E++++ V PD+ T
Sbjct: 73 AGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVT 132
Query: 117 YNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVE 176
+N+ + + + + +D M S G + N V + S + + E
Sbjct: 133 HNVMVDARFRAGDAEAAMALVDSMV--SKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKE 190
Query: 177 AEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGH 236
+ ++ LI + +G ++ +I+K +R K ++ C++ + G
Sbjct: 191 MDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGK 250
Query: 237 LKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
+ + + + D ++G F GL A ++ C P
Sbjct: 251 MDHAMAYLREMRCFGLVP-DGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLP 303
Score = 38.1 bits (87), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 54/286 (18%), Positives = 111/286 (38%), Gaps = 40/286 (13%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY LL+ + AE L +++ + + + ++ Y G+++K + + +
Sbjct: 307 TYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTM 366
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM------------------SCDSGGS 147
+ + PDI TYN I ++D+ D+M C+ G
Sbjct: 367 LNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQV 426
Query: 148 DDWVKYVN-------LVNIYITASHLVNAESSTLVEAEKSITQR--------QWITYDFL 192
+D +++ L NI S + S V + Q+ ITY+ L
Sbjct: 427 EDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTL 486
Query: 193 IILYAGLGNKDKIDQIWKSLRMTKQKMTSRN---YICILSSYLMLGHLKEVGEIIDQWKQ 249
I Y +DK+ +K L M +++ + Y +++ + + G+++E G I ++
Sbjct: 487 IHGYI---KEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCA 543
Query: 250 SATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNASG 295
D ++ G +++A + H +LQ+ A+G
Sbjct: 544 KGIEP-DRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGKEKRRAAG 588
>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Brachypodium distachyon]
Length = 718
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 106/245 (43%), Gaps = 3/245 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L+ + A + AE L +++ + + + +N ++ G++E + +E+
Sbjct: 192 TYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEM 251
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
R+ + PD +YN +S + + EM+ G D V + +L++ A +
Sbjct: 252 AREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMA-QKGVVPDVVTFTSLIHAMCRAGN 310
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
L A + E+ + ++ T+ LI + G D K +R + + + Y
Sbjct: 311 LERAVALVGQMRERGLRMNEF-TFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYN 369
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 285
+++ Y LG + E E+I + + D+ + +L + +G T+ A E + +L+
Sbjct: 370 VLINGYCKLGRMDEARELIHEMEAKGMKP-DVVTYSTILSGYCKIGDTDSAFELNRKMLK 428
Query: 286 KNCAP 290
K P
Sbjct: 429 KGVVP 433
Score = 44.7 bits (104), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 60/118 (50%), Gaps = 1/118 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY++L+ + A ELFE++ Q L + Y ++ + G V+K + +E+
Sbjct: 437 TYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEM 496
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
+K V+PD+ TY++ I + + + ++ L ++ + D+ +KY L++ TA
Sbjct: 497 IKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDN-IKYEALMHCCRTA 553
>gi|357122161|ref|XP_003562784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Brachypodium distachyon]
Length = 791
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 56/116 (48%), Gaps = 1/116 (0%)
Query: 49 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 108
A++ +Y +K EE+ +K+S+++ + YN +M +Y +G EK ++ EIK
Sbjct: 602 AMISIYGKNGMVKKVEEILSLMKESSINLSTATYNSLMHMYSRLGDCEKCENILTEIKSS 661
Query: 109 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
PD ++YN I + + + + EM C SG D V Y V Y+ S
Sbjct: 662 RARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKC-SGLVPDIVTYNIFVKSYVANS 716
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 70/145 (48%), Gaps = 3/145 (2%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 102
++ TY +L+H+Y+ EK E + +K S + YN M+ Y GQ+++ + +
Sbjct: 631 STATYNSLMHMYSRLGDCEKCENILTEIKSSRARPDRYSYNTMIYAYGRKGQMKEASRLF 690
Query: 103 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 162
E+K +VPDI TYN+++ S A ++ + M G + Y ++ Y +
Sbjct: 691 SEMKCSGLVPDIVTYNIFVKSYVANSMFEEAIDLVRYM-VTHGCKPNERTYNTILQEYCS 749
Query: 163 ASHLVNAES--STLVEAEKSITQRQ 185
+ + +S S L E I++R+
Sbjct: 750 HGRIADGKSFISNLPELHPGISKRE 774
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 106/238 (44%), Gaps = 11/238 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T +LL +Y A+ ++A + + ++Q + + YN +++ Y+ G +E+ + EE+
Sbjct: 284 TLNSLLDVYGKARRYDEAIGVLKEMEQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEM 343
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ K + PD+ TY +S ID +EM +G + Y L+ + H
Sbjct: 344 EVKGIEPDVITYTTLVSGLDRAGKIDAAIGTYNEM-LRNGCKPNLCTYNALIKL-----H 397
Query: 166 LVNAESSTLVEAEKSITQRQW----ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 221
V + ++ I + +T++ L+ ++ G ++ ++K ++ +
Sbjct: 398 GVRGKFPEMMIVFDEIRSAGFVPDVVTWNTLLAVFGQNGLDTEVSGVFKEMKKSGYVPER 457
Query: 222 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 279
Y+ ++SSY G + EI + ++ DIS N +L A + G E+A +
Sbjct: 458 DTYVSLISSYSRCGLFDQAMEIYKRMIEAGIHP-DISTYNAVLSALARGGRWEQAEKL 514
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 69/158 (43%), Gaps = 3/158 (1%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
+ YTAL+ + A A +F R+ + + + YN ++ +Y + K L +
Sbjct: 176 ASAYTALISALSRASRFRDAVAVFRRMVANGVCPALVTYNVVLHVYSKIAVPWKEVLALV 235
Query: 104 EIKRKNVVP-DIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 162
+ RK+ +P D +TYN IS C + K DEM +G D V +L+++Y
Sbjct: 236 DSMRKDGIPLDRYTYNTLISCCRRRALYKEAAKVFDEMRA-AGFEPDKVTLNSLLDVYGK 294
Query: 163 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 200
A A L E E+ +TY+ LI Y G
Sbjct: 295 ARRYDEA-IGVLKEMEQGGCPPSVVTYNSLISSYVKDG 331
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/242 (18%), Positives = 113/242 (46%), Gaps = 17/242 (7%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
+TY +L+ Y+ ++A E+++R+ ++ + + YN +++ G+ E+ + E
Sbjct: 458 DTYVSLISSYSRCGLFDQAMEIYKRMIEAGIHPDISTYNAVLSALARGGRWEQAEKLFAE 517
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
++ + PD +Y+ + + A +D++K D + + + N +
Sbjct: 518 MENLDSRPDELSYSSLLHAYANAKKLDKMKSL---------SEDIYAERIESHNGLVKTL 568
Query: 165 HLVNAESSTLVEAEKSITQ--RQWITYDF-----LIILYAGLGNKDKIDQIWKSLRMTKQ 217
LVN++ + L + EK+ + R+ + D +I +Y G K+++I ++ +
Sbjct: 569 VLVNSKVNNLSDTEKAFLELRRRRCSLDINVLNAMISIYGKNGMVKKVEEILSLMKESSI 628
Query: 218 KMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 277
+++ Y ++ Y LG ++ I+ + K S+ + D + N ++ A+ G ++A+
Sbjct: 629 NLSTATYNSLMHMYSRLGDCEKCENILTEIK-SSRARPDRYSYNTMIYAYGRKGQMKEAS 687
Query: 278 EF 279
Sbjct: 688 RL 689
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 113/259 (43%), Gaps = 12/259 (4%)
Query: 35 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 94
+G+PL TY L+ ++A ++F+ ++ + + + N ++ +Y +
Sbjct: 241 DGIPLD---RYTYNTLISCCRRRALYKEAAKVFDEMRAAGFEPDKVTLNSLLDVYGKARR 297
Query: 95 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 154
++ V++E+++ P + TYN ISS +++ + +EM G D + Y
Sbjct: 298 YDEAIGVLKEMEQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEMEV-KGIEPDVITYT 356
Query: 155 NLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM 214
LV+ A ++A T E ++ + TY+ LI L+ G ++ ++ +R
Sbjct: 357 TLVSGLDRAGK-IDAAIGTYNEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMIVFDEIRS 415
Query: 215 TKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA---TSDFDISACNRLLGAFSDVG 271
+ +L+ + G EV + + K+S D +S L+ ++S G
Sbjct: 416 AGFVPDVVTWNTLLAVFGQNGLDTEVSGVFKEMKKSGYVPERDTYVS----LISSYSRCG 471
Query: 272 LTEKANEFHMLLLQKNCAP 290
L ++A E + +++ P
Sbjct: 472 LFDQAMEIYKRMIEAGIHP 490
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 105/232 (45%), Gaps = 7/232 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+ LL ++ + +F+ +K+S Y +++ Y G ++ + + +
Sbjct: 424 TWNTLLAVFGQNGLDTEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQAMEIYKRM 483
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM-SCDSGGSDDWVKYVNLVNIYITAS 164
+ PDI TYN +S+ A +Q +K EM + DS D + Y +L++ Y A
Sbjct: 484 IEAGIHPDISTYNAVLSALARGGRWEQAEKLFAEMENLDS--RPDELSYSSLLHAYANAK 541
Query: 165 HLVNAES-STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 223
L +S S + AE+ + + L+++ + + N ++ + LR + +
Sbjct: 542 KLDKMKSLSEDIYAERIESHNGLVK--TLVLVNSKVNNLSDTEKAFLELRRRRCSLDINV 599
Query: 224 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEK 275
++S Y G +K+V EI+ K+S+ + + N L+ +S +G EK
Sbjct: 600 LNAMISIYGKNGMVKKVEEILSLMKESSI-NLSTATYNSLMHMYSRLGDCEK 650
>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Brachypodium distachyon]
Length = 966
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 8/174 (4%)
Query: 55 AGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDI 114
G EKA ++ + + + + Y +++T +VEK L+ +E+KR V PD+
Sbjct: 428 CGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDV 487
Query: 115 FTYNLWISS-CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES-- 171
+TY + I S C A L I+Q + + DEM G S + V Y L++ Y+ + L+ A
Sbjct: 488 YTYTILIDSFCKAGL-IEQARSWFDEMR-SVGCSPNVVTYTALLHAYLKSKQLIQAHDIF 545
Query: 172 STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+V+A +TY LI G K ++++ L T + S Y
Sbjct: 546 HRMVDAA---CYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYF 596
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 103/250 (41%), Gaps = 32/250 (12%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYTALLH Y +K +A ++F R+ + NA+ Y+ ++ G+++K V E++
Sbjct: 524 TYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKL 583
Query: 106 --KRKNVVPDI-FTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 162
NV D F N +C N+ +D + C + D
Sbjct: 584 IGTSGNVESDFYFEGN---DTCTIAPNVVTYGALIDGL-CKAQKVSD------------- 626
Query: 163 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM--T 220
A L++A + E + I YD LI + +G D +++ LRMTK +
Sbjct: 627 AHELLDAMLAAGCEPNQ-------IVYDALIDGFCKIGKIDNAQEVF--LRMTKCGYLPS 677
Query: 221 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 280
Y ++ G L +++ + + + ++ ++ S VG EKA
Sbjct: 678 VHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNP-NVVTYTAMIDGLSKVGEIEKALNLL 736
Query: 281 MLLLQKNCAP 290
L+ +K C+P
Sbjct: 737 SLMEEKGCSP 746
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 44/95 (46%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYTA++ + EKA L +++ S N + Y ++ G+ + + +++
Sbjct: 715 TYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQM 774
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
K P+ TY + I+ C A +D+ LDEM
Sbjct: 775 NSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEM 809
Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 64/158 (40%), Gaps = 3/158 (1%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVK 71
Y ID K+ I + + F + + TYT+L+ + A ++ +
Sbjct: 646 YDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEML 705
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
+ + N + Y M+ VG++EK ++ ++ K P++ TY I T D
Sbjct: 706 NDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKAD 765
Query: 132 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 169
K +M+ G + ++V Y L+N A L A
Sbjct: 766 ASLKLFKQMN-SKGCAPNYVTYRVLINHCCAAGLLDEA 802
>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
Length = 897
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYTAL++ + ++ ++LF+ + + + ++YN ++ + + G +++ ++ E+
Sbjct: 693 TYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM 752
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
++K + PD TYN + +D+ +K +DEM+ + G D V Y L++ Y
Sbjct: 753 EKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMT-ERGIQPDLVTYNTLISGY 806
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 113/278 (40%), Gaps = 15/278 (5%)
Query: 17 RIDLMTKVFG--IHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSN 74
R+D KVF + GE E + Y AL+ Y + A +R+ +
Sbjct: 565 RVDEAVKVFDEMLTKGEVKPEAV--------MYNALIGGYCDQGKLDTALLYRDRMVERG 616
Query: 75 LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVK 134
++ YN ++ G+ + +VEE+ K + PD+FTYN+ I+ N+ +
Sbjct: 617 VAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKAL 676
Query: 135 KFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLV-EAEKSITQRQWITYDFLI 193
+ + MS G V Y L IY + E+ L EA + + + Y+ LI
Sbjct: 677 EIFENMS-RRGVRATVVTYTAL--IYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALI 733
Query: 194 ILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATS 253
++ GN D+ +I + + Y ++ +LG + E ++ID+ +
Sbjct: 734 NSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQ 793
Query: 254 DFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 291
D+ N L+ +S G + A ++ K PT
Sbjct: 794 P-DLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPT 830
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 120/294 (40%), Gaps = 45/294 (15%)
Query: 37 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 96
LPL + T+ +L A +A EL ++ + N A+ YN ++ + S G+V+
Sbjct: 479 LPLC---TTTFNIMLRHLCSAGKPARALELLRQMPRPN----AVTYNTVIAGFCSRGRVQ 531
Query: 97 KVALVVEEIK-RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM--------------- 140
++ E++ R + P+ +TY IS +D+ K DEM
Sbjct: 532 AALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNA 591
Query: 141 ----SCDSGGSDDWVKYVN------LVNIYITASHLVNA--------ESSTLVE--AEKS 180
CD G D + Y + + T + LV+A E+ LVE K
Sbjct: 592 LIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKG 651
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 240
+ TY+ LI + GN K +I++++ + T Y ++ + G ++E
Sbjct: 652 LAP-DVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQET 710
Query: 241 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
++ D+ + D+ N L+ + S G ++A E + +K AP + +
Sbjct: 711 DKLFDEAVRRGIRP-DLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVT 763
>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
Length = 948
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 102/244 (41%), Gaps = 3/244 (1%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
YT L+ G +AE +F ++ S + N YN MM Y + V+K + +E+
Sbjct: 231 YTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEML 290
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
++P++ T+ + I T + +KFL +M+ G + Y L++ Y A +L
Sbjct: 291 GDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMA-SFGVVPNIFVYNCLIDGYCKAGNL 349
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 226
A S E EK TY LI G+ ++ D + + ++ + Y
Sbjct: 350 SEA-LSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNT 408
Query: 227 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 286
++ Y G++++ E+ Q + +I + L+ + G E A + ++ K
Sbjct: 409 LIDGYCKEGNMEKAIEVCSQMTEKGIEP-NIITFSTLIDGYCKAGKMEAAMGLYTEMVIK 467
Query: 287 NCAP 290
P
Sbjct: 468 GLLP 471
Score = 44.7 bits (104), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 59/138 (42%), Gaps = 5/138 (3%)
Query: 21 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 80
+++ +HS E LP TY+ L+ G E+A+ L + +K+ NA+
Sbjct: 349 LSEALSLHSEIEKHEILP----DVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAV 404
Query: 81 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
YN ++ Y G +EK V ++ K + P+I T++ I ++ EM
Sbjct: 405 TYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEM 464
Query: 141 SCDSGGSDDWVKYVNLVN 158
G D V Y L++
Sbjct: 465 VI-KGLLPDVVAYTALID 481
>gi|414591141|tpg|DAA41712.1| TPA: hypothetical protein ZEAMMB73_063178 [Zea mays]
Length = 374
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 107/248 (43%), Gaps = 3/248 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L++ + E AE L ++ + N +++N M+ Y G V+ + +
Sbjct: 110 TYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAM 169
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
++ V DI+TYN +D+ K L M + G ++V Y L++I+
Sbjct: 170 EKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIM-IEMGVVPNYVTYTTLISIHCKDGD 228
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+V A AEK T +TY+ +I YA G+ + ++ K + Y
Sbjct: 229 MVEARRLFREMAEKGATP-SVVTYNVMIHGYAKKGSIREAERFRKEMEKKGFVPDVYTYA 287
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 285
++ + + G + ++ ++ KQ T + ++ A L+ + G +E A + + +L+
Sbjct: 288 SLVHGHCVNGKVDVALKLFEEMKQRGT-EPNVVAYTALISGLAKEGRSEAAFQLYDDMLK 346
Query: 286 KNCAPTNA 293
P ++
Sbjct: 347 AGLIPDDS 354
>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
Length = 775
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 110/246 (44%), Gaps = 4/246 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYTAL++ + EKA ELF + +S S +A++Y +++ + G++ + V+ E+
Sbjct: 491 TYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAEL 550
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K+ + PD YN I T +V + L EM ++G D + Y L+ Y + +
Sbjct: 551 KKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEME-EAGLKPDTITYNTLI-AYASKNG 608
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR-MTKQKMTSRNY 224
+ + + K+ TY +I Y GN ++ +I+K ++ +K + Y
Sbjct: 609 DLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIY 668
Query: 225 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 284
+++S +K +++ K + + + N + D EK EF ++
Sbjct: 669 NILINSLCKNNKVKSAVSLMEDMKIWGVTP-NTTTYNAIFKGLRDEKDLEKVFEFMDRMI 727
Query: 285 QKNCAP 290
+ C P
Sbjct: 728 EHACNP 733
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 91/209 (43%), Gaps = 20/209 (9%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPL---------SAKTSETYTALLHLYAGAKWTEKAE 64
Y T ID + KV R EGL L A + TY L+ + A EK +
Sbjct: 386 YNTLIDGLCKV------GRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGK 439
Query: 65 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 124
ELF+ + + ++ N + N ++ G+V E +R+ + D TY I++
Sbjct: 440 ELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAF 499
Query: 125 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR 184
N ++ + +EM SG S D + Y L++ + A + +A S L E +K +
Sbjct: 500 CNVNNFEKAMELFNEM-LKSGCSPDAIVYYTLISGFSQAGRMADA-SFVLAELKKLGIRP 557
Query: 185 QWITYDFLIILYAGLGNKDKIDQIWKSLR 213
+ Y+ LI G +K ++++ L+
Sbjct: 558 DTVCYNTLI---GGFCRTNKFHRVFEMLK 583
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 88/204 (43%), Gaps = 10/204 (4%)
Query: 78 NALMYNEMMTLYMSVG-QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKF 136
+ ++YN ++ VG Q E + L+ +K PD TYN I I++ K+
Sbjct: 382 DVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKEL 441
Query: 137 LDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILY 196
DEM + G V VN + + + V++ + VEA++ + +TY LI +
Sbjct: 442 FDEM--NKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAF 499
Query: 197 AGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFD 256
+ N +K +++ + + + Y ++S + G + + ++ + K+ D
Sbjct: 500 CNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRP-D 558
Query: 257 ISACNRLLGAFSDVGLTEKANEFH 280
N L+G F + N+FH
Sbjct: 559 TVCYNTLIGGFC------RTNKFH 576
>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
Length = 528
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYTAL++ + ++ ++LF+ + + + ++YN ++ + + G +++ ++ E+
Sbjct: 324 TYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM 383
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
++K + PD TYN + +D+ +K +DEM+ + G D V Y L++ Y
Sbjct: 384 EKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMT-ERGIQPDLVTYNTLISGY 437
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 113/278 (40%), Gaps = 15/278 (5%)
Query: 17 RIDLMTKVFG--IHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSN 74
R+D KVF + GE E + Y AL+ Y + A +R+ +
Sbjct: 196 RVDEAVKVFDEMLTKGEVKPEAV--------MYNALIGGYCDQGKLDTALLYRDRMVERG 247
Query: 75 LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVK 134
++ YN ++ G+ + +VEE+ K + PD+FTYN+ I+ N+ +
Sbjct: 248 VAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKAL 307
Query: 135 KFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLV-EAEKSITQRQWITYDFLI 193
+ + MS G V Y L IY + E+ L EA + + + Y+ LI
Sbjct: 308 EIFENMS-RRGVRATVVTYTAL--IYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALI 364
Query: 194 ILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATS 253
++ GN D+ +I + + Y ++ +LG + E ++ID+ +
Sbjct: 365 NSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQ 424
Query: 254 DFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 291
D+ N L+ +S G + A ++ K PT
Sbjct: 425 P-DLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPT 461
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 120/294 (40%), Gaps = 45/294 (15%)
Query: 37 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 96
LPL + T+ +L A +A EL ++ + N A+ YN ++ + S G+V+
Sbjct: 110 LPLC---TTTFNIMLRHLCSAGKPARALELLRQMPRPN----AVTYNTVIAGFCSRGRVQ 162
Query: 97 KVALVVEEIK-RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM--------------- 140
++ E++ R + P+ +TY IS +D+ K DEM
Sbjct: 163 AALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNA 222
Query: 141 ----SCDSGGSDDWVKYVN------LVNIYITASHLVNA--------ESSTLVE--AEKS 180
CD G D + Y + + T + LV+A E+ LVE K
Sbjct: 223 LIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKG 282
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 240
+ TY+ LI + GN K +I++++ + T Y ++ + G ++E
Sbjct: 283 LAP-DVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQET 341
Query: 241 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
++ D+ + D+ N L+ + S G ++A E + +K AP + +
Sbjct: 342 DKLFDEAVRRGIRP-DLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVT 394
>gi|224089785|ref|XP_002308813.1| predicted protein [Populus trichocarpa]
gi|222854789|gb|EEE92336.1| predicted protein [Populus trichocarpa]
Length = 270
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 55/95 (57%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+ ALLH Y A++ + A +++ +K+ L N ++YN ++ + +G V+K + E++
Sbjct: 86 TFAALLHAYGRARYGDDAFKIYREMKEKGLGLNVVLYNSILAMCADLGHVDKAVEIFEDM 145
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
K + PD +T++ I+ + + +V+ L+EM
Sbjct: 146 KSSGIKPDSWTFSSMITIFSCCGKVSEVENTLNEM 180
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 82/169 (48%), Gaps = 2/169 (1%)
Query: 78 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFL 137
+A ++ ++ +Y G + V EE+K V P++ YN+ + + QVKKF
Sbjct: 13 DATTFSTLIRIYKVAGNFDGYLNVSEEMKALGVKPNLVIYNILLDAMGRAKRPWQVKKFY 72
Query: 138 DEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYA 197
++ D+G S +V + L++ Y A + +A EK + + Y+ ++ + A
Sbjct: 73 QDI-IDNGLSPSFVTFAALLHAYGRARYGDDAFKIYREMKEKGLGL-NVVLYNSILAMCA 130
Query: 198 GLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 246
LG+ DK +I++ ++ + K S + +++ + G + EV +++
Sbjct: 131 DLGHVDKAVEIFEDMKSSGIKPDSWTFSSMITIFSCCGKVSEVENTLNE 179
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 45/94 (47%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y ++L + A +KA E+FE +K S + ++ ++ M+T++ G+V +V + E+
Sbjct: 122 YNSILAMCADLGHVDKAVEIFEDMKSSGIKPDSWTFSSMITIFSCCGKVSEVENTLNEMF 181
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
P+IF I ID V K + +
Sbjct: 182 EAGFQPNIFILTSLIQCYGKAQRIDDVVKTFNRI 215
>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
Length = 1013
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 107/247 (43%), Gaps = 7/247 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY+ L+ Y + + A+++ +++ N + YN ++ G VE+ +++
Sbjct: 246 TYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDM 305
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ +VPD FTY I+ + ++ K LDEMSC + + V Y NL++ ++
Sbjct: 306 EDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSC-AELKPNVVVYANLIDGFMREG- 363
Query: 166 LVNAESS--TLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 223
NA+ + + E + Q ITYD L+ +G D+ + K + + +
Sbjct: 364 --NADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTIT 421
Query: 224 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 283
Y I+ + K+ ++ + + + S ++ + ++ G EKA++ +
Sbjct: 422 YNLIIEGHFRHHSKKDAFRLLSEMENAGISP-NVYTYSIMIHGLCQSGEPEKASDLLEEM 480
Query: 284 LQKNCAP 290
K P
Sbjct: 481 TTKGLKP 487
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 61/125 (48%), Gaps = 1/125 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY+ ++H + EKA +L E + L NA +Y +++ Y G V + +++
Sbjct: 456 TYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKM 515
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ NV+PD++ YN I + +++ K+ +M + G + Y L++ Y+
Sbjct: 516 TKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQ-ERGLLPNEFTYSGLIHGYLKNGD 574
Query: 166 LVNAE 170
L +AE
Sbjct: 575 LESAE 579
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 52/131 (39%), Gaps = 35/131 (26%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVA------ 99
TY+ L+H Y E AE+L +R+ + L N ++Y +++ Y +EKV+
Sbjct: 561 TYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSM 620
Query: 100 -----------------------------LVVEEIKRKNVVPDIFTYNLWISSCAATLNI 130
V+ I++ VPD+ Y+ IS T +
Sbjct: 621 LDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADR 680
Query: 131 DQVKKFLDEMS 141
++ LDEMS
Sbjct: 681 EKAFGILDEMS 691
>gi|302809589|ref|XP_002986487.1| hypothetical protein SELMODRAFT_182414 [Selaginella moellendorffii]
gi|300145670|gb|EFJ12344.1| hypothetical protein SELMODRAFT_182414 [Selaginella moellendorffii]
Length = 773
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/291 (19%), Positives = 118/291 (40%), Gaps = 45/291 (15%)
Query: 2 VTHKEFVLSDSDYATRID--LMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKW 59
+T ++F L ++A R D ++F +Y + T YT ++ +
Sbjct: 44 LTMQDFSLIFREFAARSDWHRALRLF------KYMQRQQWCKPTEHIYTIMIGIMGREGL 97
Query: 60 TEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNL 119
EK E+FE + ++++ +N + ++ Y GQ E ++ +K++ V P++ TYN
Sbjct: 98 LEKCSEIFEDMPENDVKWNVYAFTALINAYGRNGQYEASLHLLARMKKERVEPNLITYNT 157
Query: 120 WISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK 179
+++C S G DW L+N++ H
Sbjct: 158 VLNAC-------------------SKGGLDW---EGLLNLFAQMRH-------------- 181
Query: 180 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 239
Q ITY+ L+ + G ++ ++K++ + + Y ++ ++ L
Sbjct: 182 EGIQPDLITYNTLLSACSSRGLVEQAAMVFKTMNESGVVADAVTYKSLVDTFAGSNQLGR 241
Query: 240 VGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
V E++ + + S DI+ N L+ A++D G A + + CAP
Sbjct: 242 VEELLREMEDEGNSP-DIAGYNSLIEAYADAGNVHGAAGVFKQMQRGGCAP 291
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/281 (20%), Positives = 108/281 (38%), Gaps = 4/281 (1%)
Query: 12 SDYATRIDLMTKVFGIHSGERYFEGLPLS--AKTSETYTALLHLYAGAKWTEKAEELFER 69
+ Y + I+ +H F+ + A ETY+ LL +Y E+ LF
Sbjct: 259 AGYNSLIEAYADAGNVHGAAGVFKQMQRGGCAPDVETYSTLLRIYGNQGCFEQVRSLFSD 318
Query: 70 VKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLN 129
+K+ + YN ++ ++ G ++ + ++ V PD TY+ +S C
Sbjct: 319 MKELSTPPTVATYNSLIQVFGEGGYFQESINLFHDMVDSGVKPDDATYSALLSVCGRGGL 378
Query: 130 IDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITY 189
+ K M + + L++ Y + +A S E + Q Y
Sbjct: 379 TREAAKIHQHMLTNE-STPSLEASAGLISSYGKMAMYKDALVSYYRIREAGLDP-QVSAY 436
Query: 190 DFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQ 249
D LI YA G + ++ + + ++ +Y +G E E + +Q
Sbjct: 437 DALIQGYAKGGLYVEAGSTLYAMNKAGFQAPVSSVNSVMEAYSKVGLHDEALEFFSELQQ 496
Query: 250 SATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
S+ D LLG + D+GL E+A E +++ + + P
Sbjct: 497 KEGSEVDERTHETLLGVYCDMGLLEEAKEEFVIIKETSKVP 537
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 103/286 (36%), Gaps = 58/286 (20%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY +L+ +AG+ + EEL ++ S + YN ++ Y G V A V +++
Sbjct: 225 TYKSLVDTFAGSNQLGRVEELLREMEDEGNSPDIAGYNSLIEAYADAGNVHGAAGVFKQM 284
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS------------------------ 141
+R PD+ TY+ + +QV+ +M
Sbjct: 285 QRGGCAPDVETYSTLLRIYGNQGCFEQVRSLFSDMKELSTPPTVATYNSLIQVFGEGGYF 344
Query: 142 ----------CDSGGSDDWVKYVNLVNIYITAS----------HLVNAESSTLVEAEKSI 181
DSG D Y L+++ H++ ES+ +EA
Sbjct: 345 QESINLFHDMVDSGVKPDDATYSALLSVCGRGGLTREAAKIHQHMLTNESTPSLEASAG- 403
Query: 182 TQRQWITYDFLIILYAGLG-NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 240
LI Y + KD + ++ +R Y ++ Y G E
Sbjct: 404 ----------LISSYGKMAMYKDALVSYYR-IREAGLDPQVSAYDALIQGYAKGGLYVEA 452
Query: 241 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 286
G + + A +S+ N ++ A+S VGL ++A EF L QK
Sbjct: 453 GSTLYAMNK-AGFQAPVSSVNSVMEAYSKVGLHDEALEFFSELQQK 497
>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Glycine max]
Length = 892
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 86/195 (44%), Gaps = 2/195 (1%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
YTAL+ Y A E A LF+R+ N++ +N M+ G+V+ L+VE+
Sbjct: 501 HAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVED 560
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+ + +V P + TYN+ + + D+ + L+ + SG + V Y + Y +
Sbjct: 561 MAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLI-SSGYQPNVVTYTAFIKAYCSQG 619
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
L AE + + + +I Y+ LI Y +G D + + + T + + Y
Sbjct: 620 RLEEAEEMVIKIKNEGVLLDSFI-YNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTY 678
Query: 225 ICILSSYLMLGHLKE 239
++ ++ H KE
Sbjct: 679 SILMKHLVIEKHKKE 693
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/201 (19%), Positives = 85/201 (42%), Gaps = 2/201 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT L+ ++A ++ + + ++ + + +N ++ Y G +E V+ +
Sbjct: 327 TYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLM 386
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ K V P++ TYN I ++D+ L++M +S S D V Y L++
Sbjct: 387 ESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMV-ESKLSPDVVTYNTLIHGLCEVGV 445
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ +A + + QW T++ ++ +G + QI +SL+ K Y
Sbjct: 446 VDSASRLFRLMIRDGFSPDQW-TFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYT 504
Query: 226 CILSSYLMLGHLKEVGEIIDQ 246
++ Y G ++ + +
Sbjct: 505 ALIDGYCKAGKIEHAASLFKR 525
>gi|302141714|emb|CBI18917.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 95/214 (44%), Gaps = 9/214 (4%)
Query: 27 IHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNE 84
I ER F + ++ TY+ ++ + +A ++F + NA+ +N
Sbjct: 231 ISEAERVFGEMKMAGIQPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNN 290
Query: 85 MMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM--SC 142
+M +++ G+ EKV V ++KR PD TYN I S N+++ K L+ + C
Sbjct: 291 LMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNSVKKGC 350
Query: 143 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNK 202
+ S N + I+ VN+ + + + +TY+ L+ ++A +
Sbjct: 351 NLNASS-----FNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFADKKST 405
Query: 203 DKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGH 236
D + ++ K + + + + Y ++S++ +GH
Sbjct: 406 DMVLKLRKEMDENEIEPNANTYRVLISTFCGIGH 439
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 37/233 (15%), Positives = 90/233 (38%), Gaps = 40/233 (17%)
Query: 62 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 121
+A+ F+ +K + ++Y ++ + G + + V E+K + P+++TY++ I
Sbjct: 199 EAQSFFDSLKD-RFEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVI 257
Query: 122 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI 181
+ + I + EM D G + + + NL+ +++ A
Sbjct: 258 DALCRSGQITRAHDVFSEM-IDVGCDPNAITFNNLMRVHVKA------------------ 298
Query: 182 TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVG 241
G +K+ Q++ ++ + Y ++ S+ +L+E
Sbjct: 299 ------------------GRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAV 340
Query: 242 EIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
+I++ K+ + + S+ N + G S +G A+ + C P +
Sbjct: 341 KILNSVKKGC--NLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVT 391
>gi|27545040|gb|AAO18446.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
gi|108711829|gb|ABF99624.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 863
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 118/300 (39%), Gaps = 46/300 (15%)
Query: 34 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYN---------- 83
F LP ++T+ +YT+L+ YA E+A EL +++K S ++ A YN
Sbjct: 159 FHDLPSESRTALSYTSLIAAYARNALHEEARELLDQMKASGVAPTAATYNTVLAACARAT 218
Query: 84 --------------EM-----------MTLYMSVGQV-------EKVALVVEEIKRKNVV 111
EM +T Y ++ ++ +++ + V+
Sbjct: 219 DPPVPFDMLLGLFAEMRHDPSPSVRPDLTTYNTLLAAAAVRALSDQSEMLLRTMLEAGVL 278
Query: 112 PDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES 171
PD +Y + + A N+ +V + EMS +G + D Y+ L+ + A
Sbjct: 279 PDTASYRHIVDAFAGAGNLSRVAELFAEMSA-TGHTPDPSAYLGLMEAHTLVGATAEA-V 336
Query: 172 STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSY 231
+ L + + TY L+ LY G D + ++++ +R T T+ Y + +
Sbjct: 337 AVLRQMQADGCPPTAATYRVLLDLYGRQGRFDGVRELFREMRTTVPPDTA-TYNVLFRVF 395
Query: 232 LMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 291
G KEV E+ S + DI C ++ A GL E A E + + PT
Sbjct: 396 GDGGFFKEVVELFQDMLHSEV-EPDIDTCENVMVACGRGGLHEDAREVLDYITTEGMVPT 454
>gi|356562783|ref|XP_003549648.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 859
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 120/280 (42%), Gaps = 6/280 (2%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLS--AKTSETYTALLHLYAGAKWTEKAEELFERVK 71
Y I L+ + + F+ +P + A+T YTA+++ Y + EL +K
Sbjct: 139 YTIMITLLGREGLLDKCREVFDEMPSNGVARTVYVYTAVINAYGRNGQFHASLELLNGMK 198
Query: 72 QSNLSFNALMYNEMMTLYMSVG-QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 130
Q +S + L YN ++ G E + + E++ + + PD+ TYN + +CA
Sbjct: 199 QERVSPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLG 258
Query: 131 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 190
D+ + M+ +SG D Y LV + + L S L E E +Y+
Sbjct: 259 DEAEMVFRTMN-ESGIVPDINTYSYLVQTFGKLNRLEKV-SELLREMESGGNLPDITSYN 316
Query: 191 FLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQS 250
L+ YA LG+ + +++ ++ + Y +L+ Y G +V +I + K S
Sbjct: 317 VLLEAYAELGSIKEAMDVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDIFLEMKVS 376
Query: 251 ATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
T D D N L+ F + G ++ ++++N P
Sbjct: 377 NT-DPDAGTYNILIQVFGEGGYFKEVVTLFHDMVEENVEP 415
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 99/245 (40%), Gaps = 3/245 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+Y LL YA ++A ++F +++ + NA Y+ ++ LY G+ + V + E+
Sbjct: 314 SYNVLLEAYAELGSIKEAMDVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDIFLEM 373
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K N PD TYN+ I +V +M + + Y L+
Sbjct: 374 KVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDM-VEENVEPNMETYEGLIFACGKGGL 432
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+A+ L EK I Y +I + ++ ++ ++ T Y
Sbjct: 433 YEDAKKILLHMNEKGIVPSSK-AYTGVIEAFGQAALYEEALVVFNTMNEVGSNPTVETYN 491
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 285
+ ++ G KE I+ + +S D+ + N ++ AF G E+A + ++ + +
Sbjct: 492 SFIHAFARGGLYKEAEAILSRMNESGLKR-DVHSFNGVIKAFRQGGQYEEAVKSYVEMEK 550
Query: 286 KNCAP 290
NC P
Sbjct: 551 ANCEP 555
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 56/136 (41%), Gaps = 35/136 (25%)
Query: 40 SAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNL-----SFNALM------------- 81
S T ETY + +H +A ++AE + R+ +S L SFN ++
Sbjct: 483 SNPTVETYNSFIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIKAFRQGGQYEEAV 542
Query: 82 --YNEM---------------MTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 124
Y EM +++Y S G V++ +EIK ++P + Y L ++
Sbjct: 543 KSYVEMEKANCEPNELTLEVVLSVYCSAGLVDESEEQFQEIKASGILPSVMCYCLMLALY 602
Query: 125 AATLNIDQVKKFLDEM 140
A ++ +DEM
Sbjct: 603 AKNDRLNDAYNLIDEM 618
>gi|224133034|ref|XP_002327945.1| predicted protein [Populus trichocarpa]
gi|222837354|gb|EEE75733.1| predicted protein [Populus trichocarpa]
Length = 1450
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 83/178 (46%), Gaps = 6/178 (3%)
Query: 38 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 97
P T + Y A++ +YA + K +ELF+ +++ + + +N ++ + G++
Sbjct: 250 PSVENTVKVYNAMMGVYARSGKFNKVQELFDLMRERGCEPDLVSFNTLINARLKAGEMTP 309
Query: 98 VALVVE---EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 154
L +E E++R + PDI TYN IS+C+ N+++ D+M D W Y
Sbjct: 310 -NLAIELLTEVRRSGLRPDIITYNTLISACSRASNLEEAVNVFDDMVAHHCEPDLWT-YN 367
Query: 155 NLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 212
++++Y AE + E ++Y+ + +A GN +K+ I + +
Sbjct: 368 AMISVYGRCGLSGKAE-QLFNDLESRGFFPDAVSYNSFLYAFAREGNVEKVKDICEEM 424
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 92/211 (43%), Gaps = 10/211 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L+ + A E+A +F+ + + + YN M+++Y G K + ++
Sbjct: 330 TYNTLISACSRASNLEEAVNVFDDMVAHHCEPDLWTYNAMISVYGRCGLSGKAEQLFNDL 389
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ + PD +YN ++ + A N+++VK +EM G D+ + Y ++++Y
Sbjct: 390 ESRGFFPDAVSYNSFLYAFAREGNVEKVKDICEEMVKIGFGKDE-MTYNTMIHMYGKQGQ 448
Query: 166 LVNAESSTLVEAEKSITQRQ-WITYDFLIILYAGLGNKDKIDQ---IWKSLRMTKQKMTS 221
N + L KS + ITY LI LG +KI++ + + T K T
Sbjct: 449 --NDLALQLYRDMKSSGRNPDVITYTVLI---DSLGKTNKIEEAAGMMSEMLNTGVKPTL 503
Query: 222 RNYICILSSYLMLGHLKEVGEIIDQWKQSAT 252
R Y ++ Y G E E D +S T
Sbjct: 504 RTYSALICGYAKAGKPVEAEETFDCMLRSGT 534
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 80/195 (41%), Gaps = 2/195 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY A++ +Y + KAE+LF ++ +A+ YN + + G VEKV + EE+
Sbjct: 365 TYNAMISVYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSFLYAFAREGNVEKVKDICEEM 424
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ D TYN I D + +M SG + D + Y L++ + ++
Sbjct: 425 VKIGFGKDEMTYNTMIHMYGKQGQNDLALQLYRDMK-SSGRNPDVITYTVLID-SLGKTN 482
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ + + E + + TY LI YA G + ++ + + + + Y
Sbjct: 483 KIEEAAGMMSEMLNTGVKPTLRTYSALICGYAKAGKPVEAEETFDCMLRSGTRPDQLAYS 542
Query: 226 CILSSYLMLGHLKEV 240
+L +L K
Sbjct: 543 VMLDIHLRFNEPKRA 557
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 59/117 (50%), Gaps = 1/117 (0%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
+TY +L+ + + E+AEELFE ++ + + Y+ MM +Y + G K +
Sbjct: 1026 DTYKSLVASFGKQQLVEQAEELFEELQSTGCKLDRSFYHIMMKIYRNSGSHSKAQRLFSM 1085
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 161
+K + V P I T +L + S ++ + +K L + ++ + + Y ++++ Y+
Sbjct: 1086 MKDEGVEPTIATMHLLMVSYGSSGQPQEAEKVLSNLK-ETDANLSTLPYSSVIDAYV 1141
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/189 (16%), Positives = 89/189 (47%), Gaps = 2/189 (1%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
+ ++L +Y K ++++R+K+ L + YN ++ +Y + ++ ++++E++
Sbjct: 958 WNSVLKMYVAIDDFRKTTQIYQRIKEDGLEPDEDTYNILIVMYCRDHRPKEGLVLMDEMR 1017
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
+ P + TY ++S ++Q ++ +E+ +G D Y ++ IY +
Sbjct: 1018 TVGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQ-STGCKLDRSFYHIMMKIYRNSGSH 1076
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 226
A+ + ++ + + T L++ Y G + +++ +L+ T +++ Y
Sbjct: 1077 SKAQRLFSMMKDEGV-EPTIATMHLLMVSYGSSGQPQEAEKVLSNLKETDANLSTLPYSS 1135
Query: 227 ILSSYLMLG 235
++ +Y+ G
Sbjct: 1136 VIDAYVRNG 1144
Score = 40.8 bits (94), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 35/180 (19%), Positives = 81/180 (45%), Gaps = 19/180 (10%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
K TY ++H+Y + A +L+ +K S + + + Y ++ ++E+ A
Sbjct: 430 GKDEMTYNTMIHMYGKQGQNDLALQLYRDMKSSGRNPDVITYTVLIDSLGKTNKIEEAAG 489
Query: 101 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
++ E+ V P + TY+ I A + ++ D M SG D + Y +++I+
Sbjct: 490 MMSEMLNTGVKPTLRTYSALICGYAKAGKPVEAEETFDCM-LRSGTRPDQLAYSVMLDIH 548
Query: 161 ITASHLVNAESSTLVEAEKSITQRQWITYDFLI-------ILYAGLGNKDKIDQIWKSLR 213
+ + E ++++T + + +D ++ ++ LGN +K++ I + +R
Sbjct: 549 LRFN-----------EPKRAMTFYKEMIHDGIMPEHSLYELMLRTLGNANKVEDIGRVVR 597
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/113 (20%), Positives = 54/113 (47%)
Query: 42 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 101
T TY+AL+ YA A +AEE F+ + +S + L Y+ M+ +++ + ++
Sbjct: 501 PTLRTYSALICGYAKAGKPVEAEETFDCMLRSGTRPDQLAYSVMLDIHLRFNEPKRAMTF 560
Query: 102 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 154
+E+ ++P+ Y L + + ++ + + + +M G + + Y+
Sbjct: 561 YKEMIHDGIMPEHSLYELMLRTLGNANKVEDIGRVVRDMEEVCGMNPQAISYI 613
Score = 37.4 bits (85), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 41/246 (16%), Positives = 94/246 (38%), Gaps = 4/246 (1%)
Query: 7 FVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAE 64
F +S S +D + I ++ + G+ + + Y + L K E
Sbjct: 881 FKISKSSILLMLDAFARAGNIFEVKKIYHGMKAAGYFPSMHLYRVMAQLLCRGKQVRDVE 940
Query: 65 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 124
+ ++++ + ++N ++ +Y+++ K + + IK + PD TYN+ I
Sbjct: 941 AMLSEMEEAGFKPDLSIWNSVLKMYVAIDDFRKTTQIYQRIKEDGLEPDEDTYNILIVMY 1000
Query: 125 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR 184
+ +DEM G Y +LV + LV E + + +
Sbjct: 1001 CRDHRPKEGLVLMDEMRT-VGLEPKLDTYKSLVASF-GKQQLVEQAEELFEELQSTGCKL 1058
Query: 185 QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEII 244
Y ++ +Y G+ K +++ ++ + T ++ SY G +E +++
Sbjct: 1059 DRSFYHIMMKIYRNSGSHSKAQRLFSMMKDEGVEPTIATMHLLMVSYGSSGQPQEAEKVL 1118
Query: 245 DQWKQS 250
K++
Sbjct: 1119 SNLKET 1124
>gi|225459754|ref|XP_002284756.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Vitis vinifera]
Length = 531
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 95/214 (44%), Gaps = 9/214 (4%)
Query: 27 IHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNE 84
I ER F + ++ TY+ ++ + +A ++F + NA+ +N
Sbjct: 266 ISEAERVFGEMKMAGIQPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNN 325
Query: 85 MMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM--SC 142
+M +++ G+ EKV V ++KR PD TYN I S N+++ K L+ + C
Sbjct: 326 LMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNSVKKGC 385
Query: 143 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNK 202
+ S N + I+ VN+ + + + +TY+ L+ ++A +
Sbjct: 386 NLNASS-----FNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFADKKST 440
Query: 203 DKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGH 236
D + ++ K + + + + Y ++S++ +GH
Sbjct: 441 DMVLKLRKEMDENEIEPNANTYRVLISTFCGIGH 474
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 37/233 (15%), Positives = 90/233 (38%), Gaps = 40/233 (17%)
Query: 62 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 121
+A+ F+ +K + ++Y ++ + G + + V E+K + P+++TY++ I
Sbjct: 234 EAQSFFDSLKD-RFEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVI 292
Query: 122 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI 181
+ + I + EM D G + + + NL+ +++ A
Sbjct: 293 DALCRSGQITRAHDVFSEM-IDVGCDPNAITFNNLMRVHVKA------------------ 333
Query: 182 TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVG 241
G +K+ Q++ ++ + Y ++ S+ +L+E
Sbjct: 334 ------------------GRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAV 375
Query: 242 EIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
+I++ K+ + + S+ N + G S +G A+ + C P +
Sbjct: 376 KILNSVKKGC--NLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVT 426
>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
Length = 902
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYTAL++ + ++ ++LF+ + + + ++YN ++ + + G +++ ++ E+
Sbjct: 698 TYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM 757
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
++K + PD TYN + +D+ +K +DEM+ + G D V Y L++ Y
Sbjct: 758 EKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMT-ERGIQPDLVTYNTLISGY 811
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 113/278 (40%), Gaps = 15/278 (5%)
Query: 17 RIDLMTKVFG--IHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSN 74
R+D KVF + GE E + Y AL+ Y + A +R+ +
Sbjct: 570 RVDEAVKVFDEMLTKGEVKPEAV--------MYNALIGGYCDQGKLDTALLYRDRMVERG 621
Query: 75 LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVK 134
++ YN ++ G+ + +VEE+ K + PD+FTYN+ I+ N+ +
Sbjct: 622 VAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKAL 681
Query: 135 KFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLV-EAEKSITQRQWITYDFLI 193
+ + MS G V Y L IY + E+ L EA + + + Y+ LI
Sbjct: 682 EIFENMS-RRGVRATVVTYTAL--IYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALI 738
Query: 194 ILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATS 253
++ GN D+ +I + + Y ++ +LG + E ++ID+ +
Sbjct: 739 NSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQ 798
Query: 254 DFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 291
D+ N L+ +S G + A ++ K PT
Sbjct: 799 P-DLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPT 835
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 120/294 (40%), Gaps = 45/294 (15%)
Query: 37 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 96
LPL + T+ +L A +A EL ++ + N A+ YN ++ + S G+V+
Sbjct: 484 LPLC---TTTFNIMLRHLCSAGKPARALELLRQMPRPN----AVTYNTVIAGFCSRGRVQ 536
Query: 97 KVALVVEEIK-RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM--------------- 140
++ E++ R + P+ +TY IS +D+ K DEM
Sbjct: 537 AALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNA 596
Query: 141 ----SCDSGGSDDWVKYVN------LVNIYITASHLVNA--------ESSTLVE--AEKS 180
CD G D + Y + + T + LV+A E+ LVE K
Sbjct: 597 LIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKG 656
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 240
+ TY+ LI + GN K +I++++ + T Y ++ + G ++E
Sbjct: 657 LAP-DVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQET 715
Query: 241 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
++ D+ + D+ N L+ + S G ++A E + +K AP + +
Sbjct: 716 DKLFDEAVRRGIRP-DLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVT 768
>gi|326513552|dbj|BAJ87795.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 538
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/248 (20%), Positives = 107/248 (43%), Gaps = 3/248 (1%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
TY AL++ + E AE L ++ + N +++N M+ Y G V+K +
Sbjct: 274 RTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGYCRHGMVDKALEIKAV 333
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
++R + D++TYN ++ KK L M+ ++G ++V Y L++I+
Sbjct: 334 MERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMT-ENGVESNYVSYTTLISIHSKEG 392
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
+V A + E ++ +TY+ +I Y G+ + ++ K + Y
Sbjct: 393 DMVEAR-RLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEMEKKGLVPDVYTY 451
Query: 225 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 284
++ + + G + + ++ KQ ++ A L+ + G +E+A +F+ +L
Sbjct: 452 AALVHGHCVNGKVDVALRLFEEMKQRGAKP-NVVAYTALISGLAKEGRSEEAFQFYDNML 510
Query: 285 QKNCAPTN 292
P +
Sbjct: 511 AAGLTPDD 518
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 77/177 (43%), Gaps = 8/177 (4%)
Query: 38 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 97
PLSA + ++ + A + A L + + + + NA YN ++ Y +
Sbjct: 133 PLSA------SVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDAR 186
Query: 98 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 157
VA V++E++ V P + TY + + + +I +V+ DE+ + D + Y ++
Sbjct: 187 VAEVLKEMESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYF-YSAVI 245
Query: 158 NIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM 214
N Y A ++ A S E + + TY LI + +G + + + +++
Sbjct: 246 NAYCRAGNVRRA-SEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQL 301
Score = 43.9 bits (102), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 68/162 (41%), Gaps = 2/162 (1%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y LL Y K + E+ + ++ + Y ++ + G + KV V +EIK
Sbjct: 171 YNPLLDTYTRQKNDARVAEVLKEMESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIK 230
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
RKNV D++ Y+ I++ N+ + + DE +G + Y L+N + +
Sbjct: 231 RKNVAGDVYFYSAVINAYCRAGNVRRASEVFDE-CVGNGIEPNERTYGALINGFCKIGQI 289
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQI 208
AE L + + I ++ +I Y G DK +I
Sbjct: 290 EAAE-MLLTDMQLRGVGHNQIIFNTMIDGYCRHGMVDKALEI 330
>gi|162460542|ref|NP_001105869.1| pentatricopeptide repeat protein [Zea mays]
gi|95931777|gb|ABF57644.1| pentatricopeptide repeat protein [Zea mays]
Length = 886
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 92/207 (44%), Gaps = 2/207 (0%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y+ ++H + + ++AEEL +++ + +Y+ MM Y V +K +V E +K
Sbjct: 359 YSNIIHAHCQSGNMDRAEELVREMEEDGIDAPIDVYHSMMHGYTVVQDEKKCLIVFERLK 418
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
P I +Y I+ + + EM G + Y L+N +I
Sbjct: 419 ECGFKPTIISYGCLINLYVKVGKVPKAIAISKEME-SHGIKHNNKTYSMLINGFIHLHDF 477
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 226
NA S + KS Q Y+ L+ + +GN D+ +I++ ++ + + ++R +
Sbjct: 478 ANA-FSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMQKERMQPSNRTFRP 536
Query: 227 ILSSYLMLGHLKEVGEIIDQWKQSATS 253
I+ + + G +K + +D ++S +
Sbjct: 537 IIEGFAVAGDMKRAFDTLDLMRRSGCA 563
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 84/192 (43%), Gaps = 2/192 (1%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
A TYT ++ YA + KA E F ++K+S L + +Y ++ G+++
Sbjct: 598 APNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALA 657
Query: 101 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
V E+ + + + F YN+ I A ++ + L +M D G + + + +N
Sbjct: 658 VTREMSFQKIPRNTFIYNILIDGWARRGDVWEAADLLKQMKED-GIPPNIHTFTSYINAC 716
Query: 161 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 220
A + AE+ A+ + + T+ LI +A + D+ + ++ ++ K
Sbjct: 717 CKAGDMQRAENVIQEMADVGL-KPNVKTFTTLIKGWARVSLPDRALKCFEEMKSAGLKPD 775
Query: 221 SRNYICILSSYL 232
Y C+++S L
Sbjct: 776 EAAYHCLVTSLL 787
Score = 44.7 bits (104), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 59/292 (20%), Positives = 113/292 (38%), Gaps = 36/292 (12%)
Query: 34 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 93
FE +P ++ + ++ YA A FE ++ + NA ++ ++ Y G
Sbjct: 243 FERIPKPSR--REFGLMVVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVAG 300
Query: 94 QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLN-------IDQVKKFLDEMS----- 141
+ VEE+K + + + TY++ IS T + + K LD ++
Sbjct: 301 DMRGALSCVEEMKSEGIEMTVVTYSILISGYGKTNDAQSADNLFKEAKTKLDNLNGIIYS 360
Query: 142 ------CDSGGSDDWVKYVN---------LVNIYITASH---LVNAESSTLVEAEK---S 180
C SG D + V +++Y + H +V E L+ E+
Sbjct: 361 NIIHAHCQSGNMDRAEELVREMEEDGIDAPIDVYHSMMHGYTVVQDEKKCLIVFERLKEC 420
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 240
+ I+Y LI LY +G K I K + K ++ Y +++ ++ L
Sbjct: 421 GFKPTIISYGCLINLYVKVGKVPKAIAISKEMESHGIKHNNKTYSMLINGFIHLHDFANA 480
Query: 241 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 292
I + +S D + N L+ AF +G ++A + ++ P+N
Sbjct: 481 FSIFEDMIKSGLQP-DRAIYNLLVEAFCKMGNMDRAIRIFERMQKERMQPSN 531
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 35/176 (19%), Positives = 85/176 (48%), Gaps = 8/176 (4%)
Query: 42 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 101
++ T+ ++ +A A ++A + + +++S + + YN ++ + QVEK V
Sbjct: 529 PSNRTFRPIIEGFAVAGDMKRAFDTLDLMRRSGCAPTVMTYNALIHGLVRKHQVEKAVSV 588
Query: 102 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 161
++++ + P+ TY + + AA+ +I + ++ ++ +SG D Y L+
Sbjct: 589 LDKMSIAGIAPNEHTYTIIMRGYAASGDIGKAFEYFTKIK-ESGLKLDVYIYETLLRACC 647
Query: 162 TASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 217
+ + +A + T + + I + +I Y+ LI +A G+ +W++ + KQ
Sbjct: 648 KSGRMQSALAVTREMSFQKIPRNTFI-YNILIDGWARRGD------VWEAADLLKQ 696
Score = 37.4 bits (85), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 43/101 (42%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
A T TY AL+H EKA + +++ + ++ N Y +M Y + G + K
Sbjct: 563 APTVMTYNALIHGLVRKHQVEKAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGKAFE 622
Query: 101 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 141
+IK + D++ Y + +C + + EMS
Sbjct: 623 YFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMS 663
>gi|242035429|ref|XP_002465109.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
gi|241918963|gb|EER92107.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
Length = 1153
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/248 (20%), Positives = 108/248 (43%), Gaps = 9/248 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L++ + + +A E+++ + + +S + Y+ +M + V+ V ++ E+
Sbjct: 180 TYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVSFGKKRDVDTVLWLLNEM 239
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ + V P++++Y + I D+ + L +M DSG D V + ++ + A
Sbjct: 240 EARGVKPNVYSYTICIRVLGQAARFDEAYQILGKME-DSGCKPDVVTHTVVIQVLCDAGR 298
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
L +A+ + + S + +TY L+ G+ + +IW ++ +Y
Sbjct: 299 LSDAK-DVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVMEIWNAMVADGYNDNIVSYT 357
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF--HMLL 283
++ + +G L E + D+ K+ S S N L+ F + ++A E HM
Sbjct: 358 AVVDALCQVGRLDEALAVFDEMKEKGISPEQYSY-NSLISGFLKADMFDRALELFNHM-- 414
Query: 284 LQKNCAPT 291
C P+
Sbjct: 415 --NACGPS 420
Score = 43.9 bits (102), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 95/209 (45%), Gaps = 9/209 (4%)
Query: 34 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 93
F+GL +S KT +Y +L+ + AE+LF +K+ + YN ++
Sbjct: 764 FKGLGVSLKTG-SYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSM 822
Query: 94 QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQ-VKKFLDEMSCDSGGSDDWVK 152
++E++ V E+ RK TYN IS + ++Q + + + MS G S
Sbjct: 823 RIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMS--EGFSPTPCT 880
Query: 153 YVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 212
Y L++ + A +V+AE + E + + Y+ L+ + GN + + QI++
Sbjct: 881 YGPLLDGLLKAGKMVDAE-NLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVCQIFE-- 937
Query: 213 RMTKQKMTS--RNYICILSSYLMLGHLKE 239
+M +Q + ++Y ++ + G L +
Sbjct: 938 KMVEQGINPDIKSYTVLIDTLCTAGRLND 966
Score = 40.8 bits (94), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 78/196 (39%), Gaps = 4/196 (2%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
+ T TY LL A AE LF + + N +YN ++ + G E V
Sbjct: 875 SPTPCTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVCQ 934
Query: 101 VVEEIKRKNVVPDIFTYNLWISS-CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 159
+ E++ + + PDI +Y + I + C A D + F + + G D + Y NL+
Sbjct: 935 IFEKMVEQGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQLL--ELGLEPDLIIY-NLLID 991
Query: 160 YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 219
+ S + E +K TY+ LI+ G + Q+++ L + K
Sbjct: 992 GLGKSERIEEAVCLFNEMKKKGIVPNLYTYNSLILHLGKAGKASEAAQMYEELLIKGWKP 1051
Query: 220 TSRNYICILSSYLMLG 235
Y ++ Y + G
Sbjct: 1052 NVFTYNALIRGYSVSG 1067
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 41/95 (43%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+ ++ Y + + KA + +E +K + + N +++ G++ V E+
Sbjct: 425 THVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLSSLARSGRLGMAKRVFYEL 484
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
K V PD TY + I C+ D+ F +M
Sbjct: 485 KDMGVSPDTITYTMMIKCCSKASKADEAMNFFSDM 519
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 53/118 (44%), Gaps = 2/118 (1%)
Query: 52 HLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVV 111
HL K E A +LF + K +S YN ++ + ++ + E+KR
Sbjct: 747 HLCKHKKALE-AHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCG 805
Query: 112 PDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 169
PD FTYNL + + ++ I+++ + EM G +V Y +++ + + L A
Sbjct: 806 PDEFTYNLILDAMGKSMRIEEMLRVQAEMH-RKGYESTYVTYNTIISGLVKSKRLEQA 862
Score = 37.0 bits (84), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 79/206 (38%), Gaps = 27/206 (13%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVK 71
Y ID + ++ G YF L + Y L+ ++ E+A LF +K
Sbjct: 951 YTVLIDTLCTAGRLNDGLSYFRQLLELGLEPDLIIYNLLIDGLGKSERIEEAVCLFNEMK 1010
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
+ + N YN ++ G+ + A + EE+ K P++FTYN I + + + D
Sbjct: 1011 KKGIVPNLYTYNSLILHLGKAGKASEAAQMYEELLIKGWKPNVFTYNALIRGYSVSGSTD 1070
Query: 132 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA---SHLVNAESSTLVEAEKSITQRQWIT 188
D C + G V+L I+ +L+N E ++ T
Sbjct: 1071 NAYAAYD---CVAVG-------VSLKTALISGLVDENLINIAEGLFAEMKRRGCGPDQFT 1120
Query: 189 YDFLIILYAGLGNKDKIDQIWKSLRM 214
Y+ + +D I KS+R+
Sbjct: 1121 YNLI------------LDAIGKSMRI 1134
>gi|255557995|ref|XP_002520026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540790|gb|EEF42350.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1040
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 102/233 (43%), Gaps = 9/233 (3%)
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
++AE + + + N+ + + YN + + G++ A + E + V P I TYN
Sbjct: 704 QEAENIVRKSIRENMDLDTVAYNIFIKAMLEAGRLHFAASIYEHMLSLGVTPSIQTYNTM 763
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
IS +D+ + + +C SG S D Y+N+V+ Y A N S + ++
Sbjct: 764 ISVYGRGEKLDKAVEIFN-TACSSGVSLDEKAYMNMVSYYGKAGKR-NEASLLFTKMQEE 821
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 240
+ ++Y+ +I ++A G + +++ +++ S Y+ ++ +Y E
Sbjct: 822 GIKPGKVSYNIMIKVFAIAGLYHEAKELFHAMQRDGWPPDSFTYLSLVQAYTESLKYSEA 881
Query: 241 GEIIDQWKQSATSDFDISAC---NRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
E ID + + +C N LL A++ GL +A + LL +P
Sbjct: 882 EETIDGMPKKGV----LPSCSHFNHLLSAYAKAGLMVEAERVYKKLLTSGLSP 930
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 97/220 (44%), Gaps = 3/220 (1%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
+TY ++ +Y + +KA E+F S +S + Y M++ Y G+ + +L+ +
Sbjct: 758 QTYNTMISVYGRGEKLDKAVEIFNTACSSGVSLDEKAYMNMVSYYGKAGKRNEASLLFTK 817
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
++ + + P +YN+ I A + K+ M D G D Y++LV Y +
Sbjct: 818 MQEEGIKPGKVSYNIMIKVFAIAGLYHEAKELFHAMQRD-GWPPDSFTYLSLVQAYTESL 876
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
AE + +K + ++ L+ YA G + ++++K L + Y
Sbjct: 877 KYSEAEETIDGMPKKGVLP-SCSHFNHLLSAYAKAGLMVEAERVYKKLLTSGLSPDLACY 935
Query: 225 ICILSSYLMLGHLKEVGEIIDQWKQSATSD-FDISACNRL 263
+L YL G +++ +Q K+ A SD F +SA L
Sbjct: 936 RAMLRGYLDYGQVEKGINFFEQIKKYAESDRFIMSAAVHL 975
>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Brachypodium distachyon]
Length = 651
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 98/211 (46%), Gaps = 2/211 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L+ KA EL++ + + N + Y+ ++ + GQV+ ++E+
Sbjct: 441 TYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEM 500
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K +VP+I TYN I + N+ + ++FL +M D D + Y L++ Y+
Sbjct: 501 VNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKV-MPDLITYNTLIHGYVKEGK 559
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ A + L E Q +TY+ +I ++ GN + D ++K + + Y+
Sbjct: 560 MHEA-FNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYM 618
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFD 256
+++ +++ G+ K+ ++ D+ Q + D
Sbjct: 619 SMINGHVVAGNSKKSFQLHDEMLQKGLAPDD 649
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 104/247 (42%), Gaps = 3/247 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+T L+H Y EKA + F+ + L + + YN ++ G + K + +++
Sbjct: 406 TFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDM 465
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ + P+ TY++ I S +D FLDEM + G + + Y +++ Y + +
Sbjct: 466 HSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEM-VNKGIVPNIMTYNSIIKGYCRSGN 524
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
V+ L + ITY+ LI Y G + + K + + + Y
Sbjct: 525 -VSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYN 583
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 285
I+S + + G+++E + + D ++ G ++K+ + H +LQ
Sbjct: 584 MIISGFSVHGNMQEADWVYKKMGARGIEP-DRYTYMSMINGHVVAGNSKKSFQLHDEMLQ 642
Query: 286 KNCAPTN 292
K AP +
Sbjct: 643 KGLAPDD 649
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 92/232 (39%), Gaps = 3/232 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY LL+ + AEEL +K+ + + + ++ Y G +EK + I
Sbjct: 371 TYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTI 430
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ + PDI TYN I ++ + + D+M + V Y L++ +
Sbjct: 431 SDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSRE-IFPNHVTYSILIDSHCEKGQ 489
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ NA + K I +TY+ +I Y GN K Q +R K Y
Sbjct: 490 VDNAFAFLDEMVNKGIVP-NIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYN 548
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 277
++ Y+ G + E ++ + ++ D N ++ FS G ++A+
Sbjct: 549 TLIHGYVKEGKMHEAFNLL-KIMENENVQPDAVTYNMIISGFSVHGNMQEAD 599
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/125 (21%), Positives = 60/125 (48%), Gaps = 3/125 (2%)
Query: 46 TYTALLH-LYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
TY ++L L +W +KA E+F + ++ + +N ++ + G++E+ +E
Sbjct: 231 TYNSVLKGLLRNGRW-DKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKE 289
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
++ + V PD+ +++ I +D ++L EM + G D V Y ++ + A
Sbjct: 290 MRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMR-EFGLMPDGVIYTMVIGGFCRAG 348
Query: 165 HLVNA 169
++ A
Sbjct: 349 LMLEA 353
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 38/234 (16%), Positives = 95/234 (40%), Gaps = 3/234 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+++ L+ L+ + A E +++ L + ++Y ++ + G + + V +E+
Sbjct: 301 SFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEM 360
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+PD+ TYN ++ + ++ L+EM + G D + L++ Y +
Sbjct: 361 VAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMK-ERGVPPDLCTFTTLIHGYCRDGN 419
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ A +++ + + +TY+ LI G+ K +++W + + Y
Sbjct: 420 IEKALQFFDTISDQRL-RPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYS 478
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 279
++ S+ G + +D+ +I N ++ + G K +F
Sbjct: 479 ILIDSHCEKGQVDNAFAFLDEMVNKGIVP-NIMTYNSIIKGYCRSGNVSKGQQF 531
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 42/240 (17%), Positives = 92/240 (38%), Gaps = 15/240 (6%)
Query: 57 AKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFT 116
A W + + V SN N N M+ Y Q +V V+ E++++ V PD+ T
Sbjct: 137 AGWPHLTADAYRLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVT 196
Query: 117 YNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT------ASHLVNAE 170
+N+ + + +++ +D M G V Y +++ + A + A
Sbjct: 197 HNVMVDARFRAGDVEAAMALIDSM-VSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAM 255
Query: 171 SSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSS 230
+ V + +++ LI + G ++ + +K +R + ++ C++
Sbjct: 256 DACGVAPDVR-------SFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGL 308
Query: 231 YLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
+ G + E + + ++ D ++G F GL +A ++ C P
Sbjct: 309 FTRRGEMDHAAEYLREMREFGLMP-DGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLP 367
>gi|295828262|gb|ADG37800.1| AT1G07590-like protein [Capsella grandiflora]
Length = 194
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 79/164 (48%), Gaps = 3/164 (1%)
Query: 80 LMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE 139
L+YN ++ + G+ + +A + +K +P + TY++ + A NID V K D
Sbjct: 20 LVYNRLIIRNSAPGRRKLIAKDLALMKADKAIPHVSTYHILMKLEANEHNIDGVLKAFDG 79
Query: 140 MSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGL 199
M +G + V Y + A AE+ T E EKS+T W T D L+ILY L
Sbjct: 80 MK-KAGVEPNEVSYCIXAMAHAVARLYTVAEAYT-EEIEKSVTGDNWSTLDILMILYGRL 137
Query: 200 GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI 243
G + ++ + W +R + S++Y+ ++ +G+L E+
Sbjct: 138 GKEKELARTWNVIRGF-HHVRSKSYLLATEAFARVGNLDRAEEL 180
>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
Length = 728
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 113/257 (43%), Gaps = 4/257 (1%)
Query: 34 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 93
E L LS TY L++ +E+ +L E ++ + N++ YN M+ ++ G
Sbjct: 328 MENLKLSPDVV-TYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKG 386
Query: 94 QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKY 153
++++V V +++ +PDI TYN IS +D+ + +DEM DD
Sbjct: 387 KMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVT-- 444
Query: 154 VNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 213
+N + + ++ L A + ++Y LII Y + ++W ++
Sbjct: 445 LNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMK 504
Query: 214 MTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLT 273
+ + Y +++ +G + + +D+ +S +I+ N ++ + G
Sbjct: 505 EKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITY-NTIIHGYCQEGQV 563
Query: 274 EKANEFHMLLLQKNCAP 290
EKA +FH +++KN P
Sbjct: 564 EKAFQFHNKMVEKNFKP 580
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 104/239 (43%), Gaps = 8/239 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY +L +A +L +K L N +N ++ +G +++ A V+E +
Sbjct: 234 TYNTILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELM 293
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ +VVPD +TYN+ IS I + + +EM + S D V Y L+N H
Sbjct: 294 SQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEME-NLKLSPDVVTYNTLINGCF--EH 350
Query: 166 LVNAESSTLVEA-EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
+ E L+E E + +TY+ ++ + G D++D+ + + + Y
Sbjct: 351 GSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTY 410
Query: 225 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 283
++S + +G + E ++D+ + D++ N +L A K +E H LL
Sbjct: 411 NTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTL-NTMLRALCR---ERKLDEAHDLL 465
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 44/234 (18%), Positives = 96/234 (41%), Gaps = 3/234 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T +L + ++A +L ++ + + Y ++ Y + + + +E+
Sbjct: 444 TLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEM 503
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K K ++P I TYN I+ +Q LDE+ +SG D + Y +++ Y
Sbjct: 504 KEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDEL-LESGLVPDEITYNTIIHGYCQEGQ 562
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ A EK+ + +T + L+ G +K +++ + + + + +Y
Sbjct: 563 VEKAFQFHNKMVEKNF-KPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYN 621
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 279
I+ S E +++++ ++ D N +LG +D G + A EF
Sbjct: 622 TIILSLCKEKRFGEAFDLLEEMEEKKLGP-DCYTYNAILGGLTDAGRMKDAEEF 674
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 102/240 (42%), Gaps = 17/240 (7%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
S TY ++ + ++ ++ ++++S + + YN +++ + VG++++ +++
Sbjct: 372 SVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMD 431
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS---GGSDDWVKYVNLVNIY 160
E+ RK + D T N + + +D+ L C + G D V Y L+ Y
Sbjct: 432 EMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLL----CSARRRGYFVDEVSYGTLIIGY 487
Query: 161 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNK----DKIDQIWKSLRMTK 216
A EK I ITY+ +I +G DK+D++ +S +
Sbjct: 488 FKHEKASQALRLWDEMKEKEIIP-SIITYNSMIAGLCQMGKTNQAIDKLDELLES-GLVP 545
Query: 217 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
++T Y I+ Y G +++ + ++ + D+ CN LL G+ EKA
Sbjct: 546 DEIT---YNTIIHGYCQEGQVEKAFQFHNKMVEKNFKP-DVVTCNTLLCGLCKEGMLEKA 601
>gi|295828264|gb|ADG37801.1| AT1G07590-like protein [Capsella grandiflora]
Length = 194
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 79/164 (48%), Gaps = 3/164 (1%)
Query: 80 LMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE 139
L+YN ++ + G+ + +A + +K +P + TY++ + A NID V K D
Sbjct: 20 LVYNRLIIRNSAPGRRKLIAKDLALMKADKAIPHVSTYHILMKLEANEHNIDGVLKAFDG 79
Query: 140 MSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGL 199
M +G + V Y + A AE+ T E EKS+T W T D L+ILY L
Sbjct: 80 MK-KAGVEPNEVSYCIXAMAHAVARLYTVAEAYT-EEIEKSVTGDNWSTLDILMILYGRL 137
Query: 200 GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI 243
G + ++ + W +R + S++Y+ ++ +G+L E+
Sbjct: 138 GKEKELARTWNVIRGF-HHVRSKSYLLATEAFARVGNLDRAEEL 180
>gi|255553476|ref|XP_002517779.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543051|gb|EEF44586.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 486
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 114/260 (43%), Gaps = 13/260 (5%)
Query: 23 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 82
K+F + + ++E +TYT LL + + E+A LFE ++ L +Y
Sbjct: 113 KIFELLRKQHWYE------PRCQTYTKLLMMLGKCRQPEEARLLFEVMQTEGLRPTIDVY 166
Query: 83 NEMMTLYMSVGQVEKVALVVEEIKR-KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 141
+++ Y G + K V+E+K + PD++TY++ I+ C D + + L EMS
Sbjct: 167 TALVSAYGESGLLAKAFSTVDEMKSVSDCKPDVYTYSVLINICTKLHRFDLIGRILSEMS 226
Query: 142 CDSGGSDDWVKYVNLVNIYITASHLVNAESS--TLVEAEKSITQRQWITYDFLIILYAGL 199
G V + ++N Y A E+S ++E S+ T++ +I Y
Sbjct: 227 Y-LGVECSTVTFNTIINGYGKAKMFREMENSLTNMIEIGNSVP--DLFTFNSVIGAYGNS 283
Query: 200 GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISA 259
G +K+++ + ++ + + ++ SY G +++ +I+ K+ +
Sbjct: 284 GRIEKMEKWYNEFQLMGISPDIKTFNILIKSYGKAGMYEKINSVIEFMKKRFFPP-TVVT 342
Query: 260 CNRLLGAFSDVGLTEKANEF 279
N ++ F G E +E+
Sbjct: 343 YNIIIETFGRAGDIENMDEY 362
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 89/186 (47%), Gaps = 3/186 (1%)
Query: 109 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVN 168
N VPD+FT+N I + + I++++K+ +E G S D + L+ Y A +
Sbjct: 265 NSVPDLFTFNSVIGAYGNSGRIEKMEKWYNEFQL-MGISPDIKTFNILIKSYGKAG-MYE 322
Query: 169 AESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICIL 228
+S + +K +TY+ +I + G+ + +D+ +K+++ K + Y ++
Sbjct: 323 KINSVIEFMKKRFFPPTVVTYNIIIETFGRAGDIENMDEYFKTMKHLGMKPNAITYCSLV 382
Query: 229 SSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 288
S+Y G L +V I+ Q + S D + N ++ A+ G +K E + + ++ C
Sbjct: 383 SAYSKAGLLMKVNSILRQVENSDVV-LDTTFFNCIINAYGQAGDVDKMAELFLEMREREC 441
Query: 289 APTNAS 294
P N +
Sbjct: 442 MPDNVT 447
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 80/168 (47%), Gaps = 2/168 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+ +++ Y + EK E+ + + +S + +N ++ Y G EK+ V+E +
Sbjct: 272 TFNSVIGAYGNSGRIEKMEKWYNEFQLMGISPDIKTFNILIKSYGKAGMYEKINSVIEFM 331
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K++ P + TYN+ I + +I+ + ++ M G + + Y +LV+ Y A
Sbjct: 332 KKRFFPPTVVTYNIIIETFGRAGDIENMDEYFKTMK-HLGMKPNAITYCSLVSAYSKAGL 390
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 213
L+ +S L + E S ++ +I Y G+ DK+ +++ +R
Sbjct: 391 LMKV-NSILRQVENSDVVLDTTFFNCIINAYGQAGDVDKMAELFLEMR 437
Score = 41.2 bits (95), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
T TY ++ + A E +E F+ +K + NA+ Y +++ Y G + KV
Sbjct: 337 PPTVVTYNIIIETFGRAGDIENMDEYFKTMKHLGMKPNAITYCSLVSAYSKAGLLMKVNS 396
Query: 101 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
++ +++ +VV D +N I++ ++D++ + EM D+ V + ++ Y
Sbjct: 397 ILRQVENSDVVLDTTFFNCIINAYGQAGDVDKMAELFLEMRERECMPDN-VTFATMIQAY 455
>gi|224113413|ref|XP_002316488.1| predicted protein [Populus trichocarpa]
gi|222865528|gb|EEF02659.1| predicted protein [Populus trichocarpa]
Length = 941
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 92/207 (44%), Gaps = 6/207 (2%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y +++ Y A ++AE L +++ + +Y+ MM Y + EK +V + +K
Sbjct: 402 YGNIIYAYCQACNMDRAEALVREMEEEGIDAPLDIYHTMMDGYTMIRNEEKCLIVFKRLK 461
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLD--EMSCDSGGSDDWVKYVNLVNIYITAS 164
P + TY I+ I +V K L+ +M G + Y L+N ++
Sbjct: 462 ECGFAPSVITYGCLIN---MYTKIGKVSKALEVSKMMKSVGIKHNMKTYSMLINGFLKLK 518
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
NA + + K + + Y+ +I + G+GN D+ + K ++ + + TSR +
Sbjct: 519 DWTNA-FAVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKERCRPTSRTF 577
Query: 225 ICILSSYLMLGHLKEVGEIIDQWKQSA 251
+ I+ + G ++ EI D ++S
Sbjct: 578 MPIIHGFARAGEMRRALEIFDMMRRSG 604
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 82/187 (43%), Gaps = 2/187 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT ++H YA T KA E F +++ L + Y ++ G+++ V E+
Sbjct: 646 TYTTIMHGYAALGDTGKAFEYFTKMRNEGLQLDVFTYEALLKACCKSGRMQSALAVTREM 705
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ + + F YN+ I A +I + + +M+ G D Y + +N A
Sbjct: 706 NAQKIPRNTFVYNILIDGWARRGDIWEAADLMQQMN-QEGVQPDIHTYTSFINACCKAGD 764
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
++ A + T+ E E + + TY LI +A +K ++ L++ K Y
Sbjct: 765 MLRA-TKTMEEMEAAGVKPNVKTYTTLIHGWANASLPEKALSCFEELKLAGLKPDKAVYH 823
Query: 226 CILSSYL 232
C+++S L
Sbjct: 824 CLMTSLL 830
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/298 (19%), Positives = 125/298 (41%), Gaps = 20/298 (6%)
Query: 3 THKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWT 60
+ +EF L YA R D+ H + FE + +S YT+L+H YA +
Sbjct: 293 SRREFGLMVGYYARRGDM-------HRARQTFESMRARGIDPSSHVYTSLIHAYAVGRDM 345
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
E+A ++ + + + + Y+ ++ + G E ++ K ++ + + Y
Sbjct: 346 EEALSCVRKMNEEGIEMSLVTYSIVVGGFAKFGNAEAADCWFKKAKERHTNLNAYIYGNI 405
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLV--EAE 178
I + N+D+ + + EM + G Y +++ Y + + N E +V +
Sbjct: 406 IYAYCQACNMDRAEALVREME-EEGIDAPLDIYHTMMDGY---TMIRNEEKCLIVFKRLK 461
Query: 179 KSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLK 238
+ ITY LI +Y +G K ++ K ++ K + Y +++ +L L
Sbjct: 462 ECGFAPSVITYGCLINMYTKIGKVSKALEVSKMMKSVGIKHNMKTYSMLINGFLKLKDWT 521
Query: 239 EVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML--LLQKNCAPTNAS 294
+ + + D+ N ++ AF +G ++A HM+ + ++ C PT+ +
Sbjct: 522 NAFAVFEDVIKDGLKP-DVVLYNNIIKAFCGMGNMDRA--IHMVKEMQKERCRPTSRT 576
Score = 40.8 bits (94), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 77/175 (44%), Gaps = 8/175 (4%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 102
TS T+ ++H +A A +A E+F+ +++S +N ++ + ++EK ++
Sbjct: 573 TSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRKMEKAVEIL 632
Query: 103 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 162
+E+ V PD TY + AA + + ++ +M + G D Y L+
Sbjct: 633 DEMALAGVSPDEHTYTTIMHGYAALGDTGKAFEYFTKMR-NEGLQLDVFTYEALLKACCK 691
Query: 163 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 217
+ + +A + T E R Y+ LI +A G+ IW++ + +Q
Sbjct: 692 SGRMQSALAVTR-EMNAQKIPRNTFVYNILIDGWARRGD------IWEAADLMQQ 739
>gi|147767652|emb|CAN77908.1| hypothetical protein VITISV_033177 [Vitis vinifera]
Length = 1563
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 100/227 (44%), Gaps = 9/227 (3%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTE--KAEELFERVK 71
Y + + + I ER F + ++ YT + + A + + +A ++F +
Sbjct: 1285 YTSLVHGWCRAGNISEAERVFGEMKMAGIXPNVYTYSIVIDALCRSGQITRAHDVFSEMI 1344
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
NA+ +N +M +++ G+ EKV V ++KR PD TYN I S N++
Sbjct: 1345 DVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLE 1404
Query: 132 QVKKFLDEM--SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITY 189
+ K L+ + C+ S N + I+ VN+ + + + +TY
Sbjct: 1405 EAVKILNSVKKGCNLNASS-----FNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTY 1459
Query: 190 DFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGH 236
+ L+ ++A + D + ++ K + + + + Y ++S++ +GH
Sbjct: 1460 NILMRMFADKKSTDMVLKLRKEMDENEIEPNANTYRVLISTFCGIGH 1506
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 37/233 (15%), Positives = 90/233 (38%), Gaps = 40/233 (17%)
Query: 62 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 121
+A+ F+ +K + ++Y ++ + G + + V E+K + P+++TY++ I
Sbjct: 1266 EAQSFFDSLKD-RFEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIXPNVYTYSIVI 1324
Query: 122 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI 181
+ + I + EM D G + + + NL+ +++ A
Sbjct: 1325 DALCRSGQITRAHDVFSEM-IDVGCDPNAITFNNLMRVHVKA------------------ 1365
Query: 182 TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVG 241
G +K+ Q++ ++ + Y ++ S+ +L+E
Sbjct: 1366 ------------------GRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAV 1407
Query: 242 EIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
+I++ K+ + + S+ N + G S +G A+ + C P +
Sbjct: 1408 KILNSVKKGC--NLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVT 1458
>gi|302822814|ref|XP_002993063.1| hypothetical protein SELMODRAFT_431180 [Selaginella moellendorffii]
gi|300139155|gb|EFJ05902.1| hypothetical protein SELMODRAFT_431180 [Selaginella moellendorffii]
Length = 570
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 93/220 (42%), Gaps = 12/220 (5%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M+ ++F L + DY +I + E F LP K + ALL L AG+
Sbjct: 156 MIRSEKFELGELDYMFQIAFAALAGCDRAAENMFANLPRVYKRKK---ALLVLMAGSSPQ 212
Query: 61 EK----AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFT 116
+ E LF+ +K + A N+MM + +++ + EE K V PD+ +
Sbjct: 213 RENRVVMERLFKELKHRSWYTEASALNQMMLFSLQPDLRKRIPDLFEEAKSLGVAPDVSS 272
Query: 117 YNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVE 176
YNL++ N +++ + D D + L YI+ A LVE
Sbjct: 273 YNLYLGFHCKEKNASGLEEVYQMLQEDPNARPDESTLLILACGYISVGCFDKA-GKALVE 331
Query: 177 AEKSIT----QRQWITYDFLIILYAGLGNKDKIDQIWKSL 212
E+ + +R+ TY+ L+ LY +K+ ++ IW L
Sbjct: 332 LEEGLDSGLFRRKQATYNKLLRLYGDTKDKEGVESIWSIL 371
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQS 73
Y+ I K G+H E F + +T++ A+L +YA + +KA ELF+++ +
Sbjct: 382 YSYAIAAFGKAEGVHKAEEIFAKVDGLLETNQV-IAMLSVYAHYGYADKARELFQKLPRK 440
Query: 74 NLSFNALMYNEMMTLYMSVGQVEKVALV 101
+ ++Y ++ Y+ G+V+K V
Sbjct: 441 RMKHRLVVYKYLIAGYLREGEVKKALQV 468
>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
Length = 896
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 89/200 (44%), Gaps = 7/200 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
YT L+ A A+ E+A EL ++++ ++ ++ G+VE +V+E+
Sbjct: 184 AYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEV 243
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K + PDI YN+ I N+D KF E+ DD V Y +++ + A
Sbjct: 244 KGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDD-VSYTSMIWVLCKAGR 302
Query: 166 LVNAES-STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
L AE +E E+++ Y+ +I+ G G+ + + +K L K++ +
Sbjct: 303 LSEAEELFGQMETERAVP--CAYAYNTMIM---GYGSAGQFENAYKLLDQLKERGCIPSV 357
Query: 225 ICILSSYLMLGHLKEVGEII 244
+ S LG ++V E +
Sbjct: 358 VSFNSILTCLGKKRKVDEAL 377
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 55/126 (43%), Gaps = 2/126 (1%)
Query: 16 TRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVKQS 73
T +D + K + G FE + +Y+ L+H A + +F +KQ
Sbjct: 536 TYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQ 595
Query: 74 NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQV 133
+ +A YN ++ + G+++K V+EE+K K V P + TY I A +D+
Sbjct: 596 GFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEA 655
Query: 134 KKFLDE 139
+E
Sbjct: 656 YMLFEE 661
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 55/105 (52%), Gaps = 3/105 (2%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
T TY +++ A ++A LFE K + N ++Y+ ++ + VG++++ L
Sbjct: 633 PPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYL 692
Query: 101 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVK---KFLDEMSC 142
++EE+ +K + P+++T+N + + I++ + + EM C
Sbjct: 693 ILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKC 737
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 54/266 (20%), Positives = 105/266 (39%), Gaps = 39/266 (14%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+YT+++ + A +AEELF +++ A YN M+ Y S GQ E +++++
Sbjct: 289 SYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQL 348
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS-----------------CDSGGSD 148
K + +P + ++N ++ +D+ + M C +G +
Sbjct: 349 KERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKDAEPNSSTYNIIIDMLCMAGKVE 408
Query: 149 DWVK----------YVNLVNIYITASHLVNAES-STLVEAEKSITQRQW----ITYDFLI 193
+ + NL+ + I L A+ E ++ +QR +TY LI
Sbjct: 409 EAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLI 468
Query: 194 ILYAGLGNKDKID---QIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQS 250
GLG K +D ++++++ T Y ++ ++ M G KE G I +
Sbjct: 469 ---DGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGR-KEDGHKIFKEMNR 524
Query: 251 ATSDFDISACNRLLGAFSDVGLTEKA 276
D++ N + G EK
Sbjct: 525 RGCQPDLTLLNTYMDCVFKAGDVEKG 550
Score = 40.4 bits (93), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 48/238 (20%), Positives = 91/238 (38%), Gaps = 10/238 (4%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSET--YTALLHLYAGAKWTEKAEELFERVK 71
Y + ID + K + R FE + + + YT+L+ + E ++F+ +
Sbjct: 464 YCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMN 523
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
+ + + N M G VEK + E+IK +PD+ +Y++ I
Sbjct: 524 RRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQAR 583
Query: 132 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 191
+ M G + D Y +V+ + + L A L E + TY
Sbjct: 584 ETSSIFHAMK-QQGFALDARAYNAVVDGFCKSGKLDKA-YEVLEEMKVKRVPPTVATYGS 641
Query: 192 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN---YICILSSYLMLGHLKEVGEIIDQ 246
+I GL D++D+ + K K N Y ++ + +G + E I+++
Sbjct: 642 II---DGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEE 696
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 52/262 (19%), Positives = 98/262 (37%), Gaps = 4/262 (1%)
Query: 34 FEGLPLSAKT-SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSV 92
FE + A+ S TY ++ + A E+A + + ++ + L N L N M+
Sbjct: 380 FEAMKKDAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKA 439
Query: 93 GQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVK 152
+ E + E ++ P+ TY I N+D + + M D+G + + V
Sbjct: 440 KKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENM-LDTGHNANPVV 498
Query: 153 YVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 212
Y +L+ + + E + Q + + G+ +K I++ +
Sbjct: 499 YTSLIRNFFMHGRKEDGH-KIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDI 557
Query: 213 RMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGL 272
+ R+Y ++ G +E I KQ + D A N ++ F G
Sbjct: 558 KGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFA-LDARAYNAVVDGFCKSGK 616
Query: 273 TEKANEFHMLLLQKNCAPTNAS 294
+KA E + K PT A+
Sbjct: 617 LDKAYEVLEEMKVKRVPPTVAT 638
>gi|302761054|ref|XP_002963949.1| hypothetical protein SELMODRAFT_166434 [Selaginella moellendorffii]
gi|300167678|gb|EFJ34282.1| hypothetical protein SELMODRAFT_166434 [Selaginella moellendorffii]
Length = 1365
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 101/246 (41%), Gaps = 38/246 (15%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
+ + ALL LY+ AEEL + +K++ L + +YN M++LY +G ALV +
Sbjct: 787 QVFKALLALYSRETVEIDAEELVKDIKKAGLELDIDIYNHMISLYSKLGSYRNAALVFKG 846
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
++ PD T+N I + + + + L EM +K N NI
Sbjct: 847 MQEIGCSPDATTFNTLIMLYSRNQMVQEAQALLREM----------IKTGNAPNIS---- 892
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
TY LI Y L + + ++KS+ T K + Y
Sbjct: 893 -----------------------TYTTLISAYGRLQAYEDAELVFKSIAETGCKPDATAY 929
Query: 225 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 284
+++ Y G +++ EII+Q K + ++ + L+ ++ G T KA E L
Sbjct: 930 NVMINVYRKAGEHRKIEEIIEQMKVDGF-EPSLTTIHMLMDSYGKGGATGKAEEVLETLP 988
Query: 285 QKNCAP 290
+ +P
Sbjct: 989 EIGMSP 994
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 111/256 (43%), Gaps = 15/256 (5%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
A +L + A A+ELF+R +S++ +YN +M++Y G V
Sbjct: 88 APNPRMLAVMLSVLGRANQPGLAQELFDRA-ESSIGNCVQVYNSLMSVYARHGDWNSVQQ 146
Query: 101 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
++ ++ + PD+ T+N+ I + + + L + +G D + Y N
Sbjct: 147 LLCRMQDRGCRPDLVTFNIVIKARTRGGMQEGLASSLLQDVYAAGLRPDTITY----NTL 202
Query: 161 ITASHLVNAESSTLVEAEKSITQRQ------WITYDFLIILYAGLGNKDKIDQIWKSLRM 214
I+A L N S ++ E+ QRQ W TY+ +I +Y G + I++ ++
Sbjct: 203 ISACSLNNRLSDAILIFEE--MQRQGCDPDIW-TYNAMISVYGRAGRVEAASSIFRIMQE 259
Query: 215 TKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTE 274
+ Y +L ++ G ++EV I + + S +I+ N ++ + G+
Sbjct: 260 QGFTPDAVTYNSVLHAFARDGRIEEVERIRGMMRDARCSSDEITY-NTMIHMYGKAGMHR 318
Query: 275 KANEFHMLLLQKNCAP 290
KA E ++ + ++ P
Sbjct: 319 KAEELYVQMKEEGRCP 334
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 65/132 (49%), Gaps = 12/132 (9%)
Query: 40 SAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVA 99
+A TYT L+ Y + E AE +F+ + ++ +A YN M+ +Y G+ K+
Sbjct: 887 NAPNISTYTTLISAYGRLQAYEDAELVFKSIAETGCKPDATAYNVMINVYRKAGEHRKIE 946
Query: 100 LVVEEIKRKNVVPDIFTYNLWISS---CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 156
++E++K P + T ++ + S AT ++V + L E+ G S D + Y ++
Sbjct: 947 EIIEQMKVDGFEPSLTTIHMLMDSYGKGGATGKAEEVLETLPEI----GMSPDAIHYTSI 1002
Query: 157 VNIYITASHLVN 168
+N SHL N
Sbjct: 1003 IN-----SHLNN 1009
Score = 44.3 bits (103), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 40/228 (17%), Positives = 96/228 (42%), Gaps = 3/228 (1%)
Query: 63 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 122
A L + V + L + + YN +++ ++ L+ EE++R+ PDI+TYN IS
Sbjct: 180 ASSLLQDVYAAGLRPDTITYNTLISACSLNNRLSDAILIFEEMQRQGCDPDIWTYNAMIS 239
Query: 123 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT 182
++ M + G + D V Y ++++ + + E + + +
Sbjct: 240 VYGRAGRVEAASSIFRIMQ-EQGFTPDAVTYNSVLHAFARDGRIEEVERIRGMMRDARCS 298
Query: 183 QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 242
+ ITY+ +I +Y G K ++++ ++ + S + ++ + G + E
Sbjct: 299 SDE-ITYNTMIHMYGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVNEAAA 357
Query: 243 IIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
+ + +S + A + ++ A++ + A + +L+ P
Sbjct: 358 MFEDMLKSQVRP-TLQAFSAMICAYAKADMFTDAEHTYSCMLRAGVRP 404
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/152 (20%), Positives = 66/152 (43%), Gaps = 2/152 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY A++ +Y A E A +F +++ + +A+ YN ++ + G++E+V + +
Sbjct: 233 TYNAMISVYGRAGRVEAASSIFRIMQEQGFTPDAVTYNSVLHAFARDGRIEEVERIRGMM 292
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ D TYN I + ++ +M + G D V + L++ + +
Sbjct: 293 RDARCSSDEITYNTMIHMYGKAGMHRKAEELYVQMK-EEGRCPDSVTFTVLIDT-LGKAG 350
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYA 197
VN ++ + KS + + +I YA
Sbjct: 351 FVNEAAAMFEDMLKSQVRPTLQAFSAMICAYA 382
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/126 (19%), Positives = 55/126 (43%), Gaps = 7/126 (5%)
Query: 15 ATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSN 74
A R++ + +F I + + + TY ++LH +A E+ E + ++ +
Sbjct: 244 AGRVEAASSIFRIMQEQGF-------TPDAVTYNSVLHAFARDGRIEEVERIRGMMRDAR 296
Query: 75 LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVK 134
S + + YN M+ +Y G K + ++K + PD T+ + I + +++
Sbjct: 297 CSSDEITYNTMIHMYGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVNEAA 356
Query: 135 KFLDEM 140
++M
Sbjct: 357 AMFEDM 362
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 42/250 (16%), Positives = 108/250 (43%), Gaps = 3/250 (1%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
A + Y+ALL YA E+A + + + L NA N ++ + G+ ++++
Sbjct: 678 AGNTSAYSALLSAYAETGNFERATRALDNMVAAGLQPNATCANYVLEAFGRAGKAKEISE 737
Query: 101 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
+ + + P+ T+ + + + N+++ + +M ++G S + L+ +Y
Sbjct: 738 FFQRLPEMGISPNSRTFVVIFHAFSRNGNLEEARSMYRQMK-EAGFSPSIQVFKALLALY 796
Query: 161 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 220
+ ++AE + + +K+ + Y+ +I LY+ LG+ ++K ++
Sbjct: 797 SRETVEIDAE-ELVKDIKKAGLELDIDIYNHMISLYSKLGSYRNAALVFKGMQEIGCSPD 855
Query: 221 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 280
+ + ++ Y ++E ++ + ++ + +IS L+ A+ + E A
Sbjct: 856 ATTFNTLIMLYSRNQMVQEAQALLREMIKTGNAP-NISTYTTLISAYGRLQAYEDAELVF 914
Query: 281 MLLLQKNCAP 290
+ + C P
Sbjct: 915 KSIAETGCKP 924
>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
Length = 721
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 121/307 (39%), Gaps = 44/307 (14%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPL--SAKTSETYTALLHLYAGAKWTEKAEELFERVK 71
Y T ID K I +F+ + A TYTAL+H Y ++ KA E++E +
Sbjct: 260 YTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMML 319
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNV-----------------VPDI 114
+ N + Y ++ G++EK + + + +K++NV P++
Sbjct: 320 SKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNV 379
Query: 115 FTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTL 174
FTY + + + + L MS + G + V Y L++ A L
Sbjct: 380 FTYGALVDGLCKAYQVKEARDLLKSMSVE-GCEPNHVVYDALIDGCCKAGK--------L 430
Query: 175 VEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM-----TKQKMTSRNYICILS 229
EA++ T YD + Y+ L ID+++K R+ KM + +
Sbjct: 431 DEAQEVFTTMLECGYDPNVYTYSSL-----IDRLFKDKRLDLALKVLSKMLENSCAPNVV 485
Query: 230 SYL-MLGHLKEVGEIIDQWK-----QSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 283
Y M+ L +VG+ + +K + + ++ ++ F G EK E +
Sbjct: 486 IYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQM 545
Query: 284 LQKNCAP 290
K CAP
Sbjct: 546 SSKGCAP 552
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 84/196 (42%), Gaps = 9/196 (4%)
Query: 18 IDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSF 77
+DL K +G E G+ L+ ++ L G EKA + +
Sbjct: 168 LDLAEKAYG----EMLEAGVVLNKVNISNFSRCL---CGIGKFEKAYNVIREMMSKGFIP 220
Query: 78 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFL 137
+ Y++++ + +VEK + +E+KR + PD++ Y I S I+Q + +
Sbjct: 221 DTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWF 280
Query: 138 DEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYA 197
DEM D G + + V Y L++ Y+ + + A + K T +TY LI
Sbjct: 281 DEMERD-GCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTP-NIVTYTALIDGLC 338
Query: 198 GLGNKDKIDQIWKSLR 213
G +K QI+K ++
Sbjct: 339 KAGKIEKASQIYKIMK 354
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 49/94 (52%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
YT ++ T++A +L +++ + N + Y M+ + G+VEK +++++
Sbjct: 487 YTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMS 546
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
K P+ TY + I+ C +T +D+ K L+EM
Sbjct: 547 SKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEM 580
>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
[Oryza sativa Japonica Group]
Length = 571
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 113/262 (43%), Gaps = 12/262 (4%)
Query: 35 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 94
E P ++ + ALL GAK + AE+ F + +S + +N +++ +GQ
Sbjct: 147 ESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQ 206
Query: 95 VEKVALVVEEIKRKNVVPDIFTYNLWISS-C--AATLNIDQVKKFLDEMSCDSGGSDDWV 151
+ K V ++IK + P + TYN I C N+ V L EM ++G S V
Sbjct: 207 LRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEM-VEAGISPTAV 265
Query: 152 KYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKS 211
+ L+N Y S+ A E ++ +TY+ LI +GL ++ K+++ K
Sbjct: 266 TFGVLINGYCKNSNTA-AAVRVFEEMKQQGIAASVVTYNSLI---SGLCSEGKVEEGVKL 321
Query: 212 LRMTKQKMTSRNYI---CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFS 268
+ + S N I C+L + G + + + ID + + D+ N L+ +
Sbjct: 322 MEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTER-NVEPDVVIYNILIDVYR 380
Query: 269 DVGLTEKANEFHMLLLQKNCAP 290
+G E A + +K +P
Sbjct: 381 RLGKMEDAMAVKEAMAKKGISP 402
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 74/166 (44%), Gaps = 2/166 (1%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y L+ +Y E A + E + + +S N YN ++T + G + +++E+K
Sbjct: 372 YNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMK 431
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
K + D+ TYN+ I + + + K LDEMS + G + + Y ++ + ++
Sbjct: 432 EKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMS-EVGLEPNHLTYNTIIQGFCDKGNI 490
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 212
+A EK + +TY+ I + +G D+ + + +
Sbjct: 491 KSA-YEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEM 535
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/201 (18%), Positives = 87/201 (43%), Gaps = 2/201 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+ +L + A + + + + N+ + ++YN ++ +Y +G++E V E +
Sbjct: 336 TFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAM 395
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+K + P++ TYN I+ + + + LDEM + G D V Y L+
Sbjct: 396 AKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMK-EKGIEADVVTYNVLIGALCCKGE 454
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ A L E + + +TY+ +I + GN +I + +++ Y
Sbjct: 455 VRKA-VKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYN 513
Query: 226 CILSSYLMLGHLKEVGEIIDQ 246
+ + +G + E +++++
Sbjct: 514 VFIKYFCQIGKMDEANDLLNE 534
>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Vitis vinifera]
Length = 625
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 13/214 (6%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 102
++ TY AL+H A E A+ L ++ + N +++N ++ Y G V++ +
Sbjct: 364 SAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQ 423
Query: 103 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 162
+++K + D+F YN S D+ K L M + G S + + + L++IY
Sbjct: 424 VVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSM-VERGVSPNTMSFTTLIDIYCK 482
Query: 163 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 222
+ V A+ E E+ ITY+ LI Y+ GN K K ++ +R
Sbjct: 483 EGNFVEAK-RVFREMEEKGNVPNIITYNVLIDGYSKRGN-------MKEAHKLKDELENR 534
Query: 223 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFD 256
I + + L H GE ID A FD
Sbjct: 535 GLIPDVYTCTSLIH----GECIDGKVDMALKLFD 564
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/245 (18%), Positives = 103/245 (42%), Gaps = 3/245 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT L+H ++ E+A+ LFE +++ + + +Y +++ G V++ ++ +E+
Sbjct: 297 TYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEM 356
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K ++P TY I ++ + ++EM G + V + L++ Y S
Sbjct: 357 TDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQ-GKGIDLNPVIFNTLIDGY-CESG 414
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+V+ V EK + Y+ + L KD+ + S+ + ++
Sbjct: 415 MVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFT 474
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 285
++ Y G+ E + + ++ +I N L+ +S G ++A++ L
Sbjct: 475 TLIDIYCKEGNFVEAKRVFREMEEKGNVP-NIITYNVLIDGYSKRGNMKEAHKLKDELEN 533
Query: 286 KNCAP 290
+ P
Sbjct: 534 RGLIP 538
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/96 (20%), Positives = 46/96 (47%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
++T L+ +Y +A+ +F +++ N + YN ++ Y G +++ + +E+
Sbjct: 472 SFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDEL 531
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 141
+ + ++PD++T I +D K DEM
Sbjct: 532 ENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMP 567
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY A + Y E+ +++ ++ N + Y ++ + ++G++E+ + EE+
Sbjct: 262 TYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEM 321
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSG 145
+ K + D++ Y IS + N+ + DEM+ D G
Sbjct: 322 REKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMT-DKG 360
>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 13/214 (6%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 102
++ TY AL+H A E A+ L ++ + N +++N ++ Y G V++ +
Sbjct: 368 SAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQ 427
Query: 103 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 162
+++K + D+F YN S D+ K L M + G S + + + L++IY
Sbjct: 428 VVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSM-VERGVSPNTMSFTTLIDIYCK 486
Query: 163 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 222
+ V A+ E E+ ITY+ LI Y+ GN K K ++ +R
Sbjct: 487 EGNFVEAK-RVFREMEEKGNVPNIITYNVLIDGYSKRGN-------MKEAHKLKDELENR 538
Query: 223 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFD 256
I + + L H GE ID A FD
Sbjct: 539 GLIPDVYTCTSLIH----GECIDGKVDMALKLFD 568
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/245 (18%), Positives = 103/245 (42%), Gaps = 3/245 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT L+H ++ E+A+ LFE +++ + + +Y +++ G V++ ++ +E+
Sbjct: 301 TYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEM 360
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K ++P TY I ++ + ++EM G + V + L++ Y S
Sbjct: 361 TDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQ-GKGIDLNPVIFNTLIDGY-CESG 418
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+V+ V EK + Y+ + L KD+ + S+ + ++
Sbjct: 419 MVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFT 478
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 285
++ Y G+ E + + ++ +I N L+ +S G ++A++ L
Sbjct: 479 TLIDIYCKEGNFVEAKRVFREMEEKGNVP-NIITYNVLIDGYSKRGNMKEAHKLKDELEN 537
Query: 286 KNCAP 290
+ P
Sbjct: 538 RGLIP 542
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/96 (20%), Positives = 46/96 (47%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
++T L+ +Y +A+ +F +++ N + YN ++ Y G +++ + +E+
Sbjct: 476 SFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDEL 535
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 141
+ + ++PD++T I +D K DEM
Sbjct: 536 ENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMP 571
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY A + Y E+ +++ ++ N + Y ++ + ++G++E+ + EE+
Sbjct: 266 TYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEM 325
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSG 145
+ K + D++ Y IS + N+ + DEM+ D G
Sbjct: 326 REKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMT-DKG 364
>gi|255582522|ref|XP_002532046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528289|gb|EEF30336.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 478
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 94/216 (43%), Gaps = 5/216 (2%)
Query: 33 YFE---GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLY 89
YFE G+ TY LL +A A+ + LF+ + QS +S + YN +M Y
Sbjct: 193 YFEKMKGMQRCQPNVVTYNILLRAFAQARNVNQVNALFKDLDQSIVSPDIYTYNGVMDAY 252
Query: 90 MSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDD 149
G + ++ V+ +K PDI T+NL I S + D++++ + S
Sbjct: 253 GKNGMIREMESVLSRMKSNQCKPDIITFNLLIDSYGKKQDFDKMEQVFKSL-LHSKERPT 311
Query: 150 WVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIW 209
+ +++ Y A NAE S L + K +ITY+ LI++Y + K +I+
Sbjct: 312 LPTFNSMITNYGKARQKENAE-SVLQKMTKMKYTPNFITYESLIMMYGFCDSVSKAREIF 370
Query: 210 KSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIID 245
+ + +++ +L Y + G E + D
Sbjct: 371 DDMIESGKEVKVSTLNAMLDVYCLNGLPMEADLLFD 406
>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
Length = 578
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 113/262 (43%), Gaps = 12/262 (4%)
Query: 35 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 94
E P ++ + ALL GAK + AE+ F + +S + +N +++ +GQ
Sbjct: 147 ESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQ 206
Query: 95 VEKVALVVEEIKRKNVVPDIFTYNLWISS-C--AATLNIDQVKKFLDEMSCDSGGSDDWV 151
+ K V ++IK + P + TYN I C N+ V L EM ++G S V
Sbjct: 207 LRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEM-VEAGISPTAV 265
Query: 152 KYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKS 211
+ L+N Y S+ A E ++ +TY+ LI +GL ++ K+++ K
Sbjct: 266 TFGVLINGYCKNSNTA-AAVRVFEEMKQQGIAASVVTYNSLI---SGLCSEGKVEEGVKL 321
Query: 212 LRMTKQKMTSRNYI---CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFS 268
+ + S N I C+L + G + + + ID + + D+ N L+ +
Sbjct: 322 MEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTER-NVEPDVVIYNILIDVYR 380
Query: 269 DVGLTEKANEFHMLLLQKNCAP 290
+G E A + +K +P
Sbjct: 381 RLGKMEDAMAVKEAMAKKGISP 402
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 74/166 (44%), Gaps = 2/166 (1%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y L+ +Y E A + E + + +S N YN ++T + G + +++E+K
Sbjct: 372 YNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMK 431
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
K + D+ TYN+ I + + + K LDEMS + G + + Y ++ + ++
Sbjct: 432 EKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMS-EVGLEPNHLTYNTIIQGFCDKGNI 490
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 212
+A EK + +TY+ I + +G D+ + + +
Sbjct: 491 KSA-YEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEM 535
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/201 (18%), Positives = 87/201 (43%), Gaps = 2/201 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+ +L + A + + + + N+ + ++YN ++ +Y +G++E V E +
Sbjct: 336 TFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAM 395
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+K + P++ TYN I+ + + + LDEM + G D V Y L+
Sbjct: 396 AKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMK-EKGIEADVVTYNVLIGALCCKGE 454
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ A L E + + +TY+ +I + GN +I + +++ Y
Sbjct: 455 VRKA-VKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYN 513
Query: 226 CILSSYLMLGHLKEVGEIIDQ 246
+ + +G + E +++++
Sbjct: 514 VFIKYFCQIGKMDEANDLLNE 534
>gi|295828270|gb|ADG37804.1| AT1G07590-like protein [Neslia paniculata]
Length = 194
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 80/164 (48%), Gaps = 3/164 (1%)
Query: 80 LMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE 139
L+YN ++ + G+ + +A + +K P + TY++ + A NID V K D
Sbjct: 20 LVYNRLIIRNSAPGRRKLIAKDLALMKADKATPHVSTYHILMKLEANEHNIDGVLKAFDG 79
Query: 140 MSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGL 199
M +G + V Y L + A AE+ T E E+SIT W T D L+ILY+ L
Sbjct: 80 MK-KAGVEPNEVSYCILAMAHAIARLYTVAEAYT-EEIERSITGDNWSTLDILMILYSRL 137
Query: 200 GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI 243
G + ++ + W +R + S++Y+ ++ +G+L E+
Sbjct: 138 GKEKELVRTWNVIRGF-HHVRSKSYLLATEAFARVGNLDRAEEL 180
>gi|297743996|emb|CBI36966.3| unnamed protein product [Vitis vinifera]
Length = 730
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 105/241 (43%), Gaps = 10/241 (4%)
Query: 46 TYTALLHL--YAGAKWTEKAE-----ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV 98
TY A++ G + AE LF + + + YN ++ GQ++
Sbjct: 172 TYNAVIDACGKGGVDFNRAAEIFDEMNLFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLA 231
Query: 99 ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 158
++ E+ RK+++P++ TY+ I A +D+ +EM S G D V Y L++
Sbjct: 232 FQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKFASIGLDR-VSYNTLLS 290
Query: 159 IYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQK 218
IY A + E E S ++ +TY+ L+ Y G +++ ++++ ++ +
Sbjct: 291 IYAKLGRFEEA-LNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIF 349
Query: 219 MTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 278
Y ++ Y G +E E+ ++K++ D+ + L+ A GL E A
Sbjct: 350 PNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKA-DVVLYSALIDALCKNGLVESAVS 408
Query: 279 F 279
F
Sbjct: 409 F 409
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 64/137 (46%), Gaps = 1/137 (0%)
Query: 42 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 101
K + TY ALL Y E+ + +FE +K + N L Y+ ++ +Y G ++ V
Sbjct: 315 KDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEV 374
Query: 102 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 161
E K+ + D+ Y+ I + ++ FLDEM+ G + V Y ++++ +
Sbjct: 375 FREFKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMT-KEGIRPNVVTYNSIIDAFG 433
Query: 162 TASHLVNAESSTLVEAE 178
+ + +A S + + E
Sbjct: 434 RSGIVEDATESEVGDKE 450
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 49 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 108
LL Y W + A+ LF+ VKQ + S + YN + + GQ LVV E KR+
Sbjct: 537 GLLMGYGDNVWVQ-AQSLFDEVKQMDSSTASAFYNALTDMLWHFGQRRGAQLVVLEGKRR 595
Query: 109 NVVPDIFTYNLWISSC 124
+V N+W +SC
Sbjct: 596 HV-----WENMWSNSC 606
>gi|302804432|ref|XP_002983968.1| hypothetical protein SELMODRAFT_423071 [Selaginella moellendorffii]
gi|300148320|gb|EFJ14980.1| hypothetical protein SELMODRAFT_423071 [Selaginella moellendorffii]
Length = 598
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 126/279 (45%), Gaps = 12/279 (4%)
Query: 5 KEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAE 64
K F + D DY ++D V ++ E F LP KT E Y +L Y + EKA
Sbjct: 123 KAFEIDDRDYVLQVDYYAHV-DMYLAEMAFNRLPDDKKTEEAYNYILAGYVRNRMLEKAV 181
Query: 65 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNV--VPDIFTYNLWIS 122
+ +++++ L +A +M L+ +G ++ +V E + + P +LWI
Sbjct: 182 VVMDKIRELGL-VSAFSLEQMTLLFHYLGLERRIPALVVEARSLGLHFHPHFLNTHLWIK 240
Query: 123 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA---EK 179
L+ +++ ++E+ G S+ W Y+ + + YI A A ++
Sbjct: 241 RRHGDLS--GMEEIVEELEL-MGRSNAWT-YIFIASAYIQAGFPEKAHAALGAAEAGIRN 296
Query: 180 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 239
++Q Y+ +++LY L + + I+++W L ++ + N++ ++ + G++
Sbjct: 297 GRFKKQRKVYNKILLLYGLLKDMEGIERVWGILN-SRPLVAVHNHLFMIEALGSAGNIGR 355
Query: 240 VGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 278
EI ++ ++ + + GA++ GL +KA E
Sbjct: 356 AEEIFEELRKCRGVRKEYRQFIVMAGAYTKNGLMDKATE 394
>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
Length = 600
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 109/260 (41%), Gaps = 6/260 (2%)
Query: 33 YFEGL-PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMS 91
YF + P ++ +YT ++ A +K ++A ELFE +K + S N + Y ++ +
Sbjct: 96 YFRAVTPKASLDVISYTTVIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLK 155
Query: 92 VGQVEKVALVVEEIKRKNVVPDIFTYNLWISS-CAATLNIDQVKKFLDEMSCDSGGSDDW 150
G++E EE+ + VP TY + I C A + D K F E G D
Sbjct: 156 AGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVF--EQMVQKGCVPDT 213
Query: 151 VKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK 210
+ Y L++ + AS + A V K + +TY ++ + L ++ ++
Sbjct: 214 ITYTTLIDGFSKASKMDEARKLLDVMLTKG-PEPTAVTYGSIVHGFCKLDMINEAKEVIA 272
Query: 211 SLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDV 270
+R + + +LS YL G +E +++ + + D+ L+
Sbjct: 273 QMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAP-DVILYTSLIDLLFST 331
Query: 271 GLTEKANEFHMLLLQKNCAP 290
G +A +++K CAP
Sbjct: 332 GRVPEARHVFDSMIEKGCAP 351
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 103/255 (40%), Gaps = 16/255 (6%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
YT+L+ L +A +F+ + + + +AL Y ++ + +G VE ++E +
Sbjct: 321 YTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMA 380
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
+ V PD F YN + +DQ D M SG + V + L++
Sbjct: 381 KSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVA-SGIKPNAVTFNVLMHGLFKDGKT 439
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 226
A S EK ++Y LI GLG ++ + + + Q+M R I
Sbjct: 440 DRAFSLFKEMLEKEEVPPTLVSYTILI---DGLGKAGRVSEAF----LQFQEMIDRGIIP 492
Query: 227 ILSSYLML-------GHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 279
+Y L G + E ++++ + + D+ A + L+ D + + A +
Sbjct: 493 ECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNP-DVQAYSALITGLIDSSMVDTAWDV 551
Query: 280 HMLLLQKNCAPTNAS 294
++++ CAP +
Sbjct: 552 FQEMMKRGCAPNEVT 566
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/168 (19%), Positives = 74/168 (44%), Gaps = 5/168 (2%)
Query: 42 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 101
T+ TY +++H + +A+E+ ++++ ++ +++ Y+S G+ E+ V
Sbjct: 246 PTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQV 305
Query: 102 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 161
+ E+ + PD+ Y I +T + + + D M + G + D + Y ++ +
Sbjct: 306 LTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSM-IEKGCAPDALTYGTIIQNFS 364
Query: 162 TASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIW 209
+ V A L KS Y+ L+ Y L +++DQ +
Sbjct: 365 KIGN-VEAAGEILELMAKSGVGPDCFAYNSLMDGYVKL---ERVDQAF 408
>gi|302780277|ref|XP_002971913.1| hypothetical protein SELMODRAFT_412643 [Selaginella moellendorffii]
gi|300160212|gb|EFJ26830.1| hypothetical protein SELMODRAFT_412643 [Selaginella moellendorffii]
Length = 570
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 94/220 (42%), Gaps = 12/220 (5%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M+ ++F L + DY +I + E F LP K + ALL L AG+
Sbjct: 156 MIRSEKFELGELDYMFQIAFAALAGCDRAAENIFANLPRVYKRKK---ALLVLMAGSSPQ 212
Query: 61 EK----AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFT 116
+ E+LF+ +K + A N+MM + +++ + EE K V PD+ +
Sbjct: 213 RENRVVMEKLFKELKHRSWYTEASGLNQMMLFSLQPDLRKRIPDLFEEAKSLGVAPDVSS 272
Query: 117 YNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVE 176
YNL++ N +++ + D D + L YI+ A LVE
Sbjct: 273 YNLYLGFHCKEKNASGLEEVYQMLQEDPNARPDESTLLILACGYISVGCFDKA-GKALVE 331
Query: 177 AEKSIT----QRQWITYDFLIILYAGLGNKDKIDQIWKSL 212
E+ + +R+ TY+ L+ LY +K+ ++ IW L
Sbjct: 332 LEEGLDSGLFRRKQATYNKLLRLYGDTKDKEGVENIWSIL 371
Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQS 73
Y+ I K G+H E F + +T++ A+L +Y + +KA ELF+++ +
Sbjct: 382 YSYAIAAFGKAEGVHKAEEIFAKVDGLLETNQV-IAMLSVYTHYGYADKARELFQKLPRK 440
Query: 74 NLSFNALMYNEMMTLYMSVGQVEKVALV 101
+ ++Y ++ Y+ G+V+K V
Sbjct: 441 RMKHRLVVYKYLIAGYLREGEVKKALQV 468
>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
Length = 1060
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 101/244 (41%), Gaps = 3/244 (1%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
YT L+ G +AE +F ++ S + N YN MM Y + V+K + E+
Sbjct: 231 YTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEML 290
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
++P++ T+ + I T + +KFL +M+ G + Y L++ Y A +L
Sbjct: 291 GDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMA-SFGVVPNIFVYNCLIDGYCKAGNL 349
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 226
A S E EK TY LI G+ ++ D + + ++ + Y
Sbjct: 350 SEA-LSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNT 408
Query: 227 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 286
++ Y G++++ E+ Q + +I + L+ + G E A + ++ K
Sbjct: 409 LIDGYCKEGNMEKAIEVCSQMTEKGIEP-NIITFSTLIDGYCKAGKMEAAMGLYTEMVIK 467
Query: 287 NCAP 290
P
Sbjct: 468 GLLP 471
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 50/113 (44%), Gaps = 1/113 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY+ L+ G E+A+ L + +K+ NA+ YN ++ Y G +EK V ++
Sbjct: 370 TYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQM 429
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 158
K + P+I T++ I ++ EM G D V Y L++
Sbjct: 430 TEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVI-KGLLPDVVAYTALID 481
>gi|356577532|ref|XP_003556878.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Glycine max]
Length = 932
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 93/207 (44%), Gaps = 6/207 (2%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y +++ + ++AE L +++ + +Y+ MM Y +G EK +V + +K
Sbjct: 392 YGGIIYAHCQICNMDRAEALVREMEEQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLK 451
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLD--EMSCDSGGSDDWVKYVNLVNIYITAS 164
P + +Y I+ + +V K L+ +M SG + Y L+N ++
Sbjct: 452 ECGFFPSVISYGCLIN---LYTKVGKVSKALEISKMMKMSGIKHNMKTYSMLINGFLKLK 508
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
NA S + K + + Y+ +I + G+GN D+ + + ++ + + T+R +
Sbjct: 509 DWANA-FSVFEDFTKDGLKPDVVLYNNIITAFCGMGNMDRAICMVRQMQKERHRPTTRTF 567
Query: 225 ICILSSYLMLGHLKEVGEIIDQWKQSA 251
+ I+ + G ++ EI D ++S
Sbjct: 568 LPIIHGFARAGEMRRALEIFDMMRRSG 594
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 80/187 (42%), Gaps = 2/187 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT L+ YA TEKA + F ++ L + Y ++ G+++ V +E+
Sbjct: 636 TYTTLMQGYASLGDTEKAFQYFTVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEM 695
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
KN+ + F YN+ I A ++ + + +M G D Y + +N A
Sbjct: 696 SAKNIPRNTFVYNILIDGWARRGDVWEAADLMQQMR-KEGLLPDIHTYTSFINACCKAGD 754
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ A + + E E S + TY LI +A +K ++ +++ K Y
Sbjct: 755 MQKA-TEIIQEMEASGIKPNLKTYTTLINGWARASMPEKALSCFEEMKLAGFKPDKAVYH 813
Query: 226 CILSSYL 232
C+++S L
Sbjct: 814 CLVTSLL 820
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 43/235 (18%), Positives = 103/235 (43%), Gaps = 3/235 (1%)
Query: 42 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 101
T+ T+ ++H +A A +A E+F+ +++S YN ++ + Q+ K +
Sbjct: 562 PTTRTFLPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRQMTKAVAI 621
Query: 102 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 161
++E+ V P+ TY + A+ + ++ ++ + + G D Y L+
Sbjct: 622 LDEMNVAGVGPNEHTYTTLMQGYASLGDTEKAFQYFTVLR-NEGLEIDVYTYEALLKSCC 680
Query: 162 TASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 221
+ + +A + T + K+I + ++ Y+ LI +A G+ + + + +R
Sbjct: 681 KSGRMQSALAVTKEMSAKNIPRNTFV-YNILIDGWARRGDVWEAADLMQQMRKEGLLPDI 739
Query: 222 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
Y +++ G +++ EII + + S ++ L+ ++ + EKA
Sbjct: 740 HTYTSFINACCKAGDMQKATEIIQEMEASGIKP-NLKTYTTLINGWARASMPEKA 793
>gi|224064580|ref|XP_002301519.1| predicted protein [Populus trichocarpa]
gi|222843245|gb|EEE80792.1| predicted protein [Populus trichocarpa]
Length = 718
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 100/234 (42%), Gaps = 9/234 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+ +LL + + E A L + + + YN ++ GQ++ ++ E+
Sbjct: 185 TFNSLLAVCSKGGLWEAARSLSCEMVNRGIDQDIFTYNTLLDAVCKGGQLDMAFEIMSEM 244
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
KN++P++ TY+ I A +D + +EM G S D V Y L++IY
Sbjct: 245 PAKNILPNVVTYSTMIDGYAKAGRLDDARNLFNEMKF-LGISLDRVSYNTLLSIYAKLGR 303
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN-- 223
A E E S ++ +TY+ L+ G G + K D + K K + S N
Sbjct: 304 FEEA-MDVCREMENSGIRKDVVTYNALL---GGYGKQYKYDVVRKVFEEMKARHVSPNLL 359
Query: 224 -YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
Y ++ Y G +E ++ ++K++ D+ + L+ A GL E A
Sbjct: 360 TYSTLIDVYSKGGLYREAMDVFREFKKAGLKA-DVVLYSALIDALCKNGLVESA 412
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 53/115 (46%), Gaps = 1/115 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY ALL Y + ++FE +K ++S N L Y+ ++ +Y G + V E
Sbjct: 325 TYNALLGGYGKQYKYDVVRKVFEEMKARHVSPNLLTYSTLIDVYSKGGLYREAMDVFREF 384
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
K+ + D+ Y+ I + ++ LDEM+ G + V Y ++++ +
Sbjct: 385 KKAGLKADVVLYSALIDALCKNGLVESAVSLLDEMT-KEGIRPNVVTYNSIIDAF 438
>gi|242074832|ref|XP_002447352.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
gi|241938535|gb|EES11680.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
Length = 888
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 95/208 (45%), Gaps = 4/208 (1%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV-EEI 105
Y+ ++H + + ++AEEL +++ + +Y+ MM Y +V Q EK L+V E +
Sbjct: 361 YSNIIHAHCQSGNMDRAEELVREMEEDGIDAPIDVYHSMMHGY-TVAQDEKKCLIVFERL 419
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K P I +Y I+ + + EM G + Y L+N +I
Sbjct: 420 KECGFRPSIISYGCLINLYVKIGKVPKALAVSKEME-SHGIKHNNKTYSMLINGFIHLHD 478
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
NA S + KS Q Y+ L+ + +GN D+ +I++ ++ + + ++R +
Sbjct: 479 FANA-FSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMKKERMQPSNRTFR 537
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATS 253
I+ + + G +K + +D ++S +
Sbjct: 538 PIIEGFAVAGDMKRALDTLDLMRRSGCA 565
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 84/192 (43%), Gaps = 2/192 (1%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
A TYT ++ YA + KA E F ++K+S L + +Y ++ G+++
Sbjct: 600 APNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALA 659
Query: 101 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
V E+ + + + F YN+ I A ++ + + +M D G + + + +N
Sbjct: 660 VTREMSFQKIPRNTFIYNILIDGWARRGDVWEAADLMKQMKED-GIPPNIHTFTSYINAC 718
Query: 161 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 220
A + AE+ A+ + + T+ LI +A + D+ + ++ ++ K
Sbjct: 719 CKAGDMQRAENVIQEMADVGL-KPNVKTFTTLIKGWAKVSLPDRALKCFEEMKSAGLKPD 777
Query: 221 SRNYICILSSYL 232
Y C+++S L
Sbjct: 778 EAAYHCLVTSLL 789
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 54/292 (18%), Positives = 108/292 (36%), Gaps = 36/292 (12%)
Query: 34 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 93
FE +P ++ + ++ YA A FE ++ + NA ++ ++ Y
Sbjct: 245 FERIPKPSRRE--FGLMVVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVAR 302
Query: 94 QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS------------ 141
+ VEE+K + + + TY++ I+ T + + K E
Sbjct: 303 DMRGALSCVEEMKSEGLEMTVVTYSILIAGYGKTNDAESADKLFKEAKTKLDNLNGIIYS 362
Query: 142 ------CDSGGSDDWVKYVN---------LVNIYITASH---LVNAESSTLVEAEK---S 180
C SG D + V +++Y + H + E L+ E+
Sbjct: 363 NIIHAHCQSGNMDRAEELVREMEEDGIDAPIDVYHSMMHGYTVAQDEKKCLIVFERLKEC 422
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 240
+ I+Y LI LY +G K + K + K ++ Y +++ ++ L
Sbjct: 423 GFRPSIISYGCLINLYVKIGKVPKALAVSKEMESHGIKHNNKTYSMLINGFIHLHDFANA 482
Query: 241 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 292
I + +S D + N L+ AF +G ++A + ++ P+N
Sbjct: 483 FSIFEDMIKSGLQP-DRAIYNLLVEAFCKMGNMDRAIRIFERMKKERMQPSN 533
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 34/175 (19%), Positives = 85/175 (48%), Gaps = 8/175 (4%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 102
++ T+ ++ +A A ++A + + +++S + + YN ++ + QVE+ V+
Sbjct: 532 SNRTFRPIIEGFAVAGDMKRALDTLDLMRRSGCAPTVMTYNALIHGLIRKHQVERAVSVL 591
Query: 103 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 162
+++ + P+ TY + + AA+ +I + ++ ++ +SG D Y L+
Sbjct: 592 DKMSIAGIAPNEHTYTIIMRGYAASGDIGKAFEYFTKIK-ESGLKLDVYIYETLLRACCK 650
Query: 163 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 217
+ + +A + T + + I + +I Y+ LI +A G+ +W++ + KQ
Sbjct: 651 SGRMQSALAVTREMSFQKIPRNTFI-YNILIDGWARRGD------VWEAADLMKQ 698
>gi|297832060|ref|XP_002883912.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329752|gb|EFH60171.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 623
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 69/138 (50%), Gaps = 5/138 (3%)
Query: 23 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 82
K F +H E +G+ T TYT+L+++ T +A+ELFE+V + + +M
Sbjct: 416 KAFALHD-EMMTDGI---KPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMM 471
Query: 83 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 142
N +M + + G +++ +++E+ R N+ PD TYN + ++ ++ + EM
Sbjct: 472 NTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMK- 530
Query: 143 DSGGSDDWVKYVNLVNIY 160
G D + Y L++ Y
Sbjct: 531 RRGIKPDHISYNTLISGY 548
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 87/214 (40%), Gaps = 14/214 (6%)
Query: 68 ERVKQSNL----SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 123
E VKQ + ++N L++ L+M ++E +++ EI+ K +V D TYN+ I+
Sbjct: 353 EMVKQGMVPTFYTYNTLIHG----LFME-NKIEAAEILIREIREKGIVLDSVTYNIVING 407
Query: 124 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQ 183
+ + DEM D G Y +L IY+ E+ L E
Sbjct: 408 YCQHGDAKKAFALHDEMMTD-GIKPTQFTYTSL--IYVLCRRNKTREADELFEKVVGKGM 464
Query: 184 RQ-WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 242
+ + + L+ + GN D+ + K + Y C++ G +E E
Sbjct: 465 KPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARE 524
Query: 243 IIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
++ + K+ IS N L+ +S G T+ A
Sbjct: 525 LMGEMKRRGIKPDHISY-NTLISGYSKKGDTKHA 557
>gi|224137224|ref|XP_002322504.1| predicted protein [Populus trichocarpa]
gi|222867134|gb|EEF04265.1| predicted protein [Populus trichocarpa]
Length = 647
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 69/129 (53%), Gaps = 2/129 (1%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLS--AKTSETYTALLHLYAGAKWTEKAEELFERVK 71
Y T +D M + +++++ + S + + TY ALL Y A++ E ++++ +K
Sbjct: 266 YNTLLDAMGRARRPWQAKKFYQDIIDSGLSPSYATYAALLRAYGRARYGEDTIKIYKEMK 325
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
+ LS N L+YN ++ + +G V++ + E++K + PD +T++ I+ + +
Sbjct: 326 EKELSLNVLLYNTILAMCADLGFVDEAIEIFEDMKNSGISPDSWTFSSMITMSSCCGKVS 385
Query: 132 QVKKFLDEM 140
+ + L+EM
Sbjct: 386 EAENMLNEM 394
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/220 (19%), Positives = 96/220 (43%), Gaps = 12/220 (5%)
Query: 33 YFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYM 90
+FE +P + T++ ++ Y EKA L++R + + ++ ++ +Y
Sbjct: 180 WFEKMPSFGLDPDDVTFSTMIDSYGRVGNVEKALSLYDRARTEKWRLDTTTFSTLIRIYK 239
Query: 91 SVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDW 150
G + V EE+K V P++ YN + + Q KKF ++ DSG S +
Sbjct: 240 DSGNFDCCLNVYEEMKALGVKPNLVIYNTLLDAMGRARRPWQAKKFYQDI-IDSGLSPSY 298
Query: 151 VKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQW----ITYDFLIILYAGLGNKDKID 206
Y L+ Y A + ++ K + +++ + Y+ ++ + A LG D+
Sbjct: 299 ATYAALLRAYGRARY-----GEDTIKIYKEMKEKELSLNVLLYNTILAMCADLGFVDEAI 353
Query: 207 QIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 246
+I++ ++ + S + +++ G + E ++++
Sbjct: 354 EIFEDMKNSGISPDSWTFSSMITMSSCCGKVSEAENMLNE 393
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 45/94 (47%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y +L + A + ++A E+FE +K S +S ++ ++ M+T+ G+V + ++ E+
Sbjct: 336 YNTILAMCADLGFVDEAIEIFEDMKNSGISPDSWTFSSMITMSSCCGKVSEAENMLNEMF 395
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
P+IF I ID V K + +
Sbjct: 396 EAGFQPNIFVLTSLIQCYGKAQRIDDVVKTFNRL 429
>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Glycine max]
Length = 1024
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 10/163 (6%)
Query: 55 AGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDI 114
GA +KA E+ + + Y++++ +VEK L+ EE+K+ +VP +
Sbjct: 429 CGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSV 488
Query: 115 FTYNLWISS-CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES-- 171
+TY + I S C A L I Q + + DEM D+ + + V Y +L++ Y+ A + +A
Sbjct: 489 YTYTILIDSFCKAGL-IQQARNWFDEMLRDN-CTPNVVTYTSLIHAYLKARKVFDANKLF 546
Query: 172 -STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 213
L+E K +TY LI + G DK QI+ ++
Sbjct: 547 EMMLLEGSKP----NVVTYTALIDGHCKAGQIDKACQIYARMQ 585
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 47/94 (50%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
YT ++ TE+A L ++++ N + Y M+ + +G++E+ + ++
Sbjct: 717 YTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMC 776
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
K P+ TY + I+ C +T +D+ + LDEM
Sbjct: 777 SKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEM 810
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 45/252 (17%), Positives = 113/252 (44%), Gaps = 17/252 (6%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY++L++ K + ++ ++ +++ + N ++Y +M+ VG+ E+ ++ ++
Sbjct: 681 TYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKM 740
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ P++ TY I I+Q + +M C G + +++ Y L+N + ++
Sbjct: 741 EEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDM-CSKGCAPNFITYRVLIN-HCCSTG 798
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQI--WKSLRMTKQKMTSRN 223
L++ L E +++ R +Y +I + N++ I I L +
Sbjct: 799 LLDEAHRLLDEMKQTYWPRHISSYRKIIEGF----NREFITSIGLLDELSENESVPVESL 854
Query: 224 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNR-----LLGAFSDVGLTEKANE 278
Y ++ +++ G L+ ++++ S + ++ N+ L+ + S +KA E
Sbjct: 855 YRILIDNFIKAGRLEGALNLLEEISSSPS----LAVANKYLYTSLIESLSHASKVDKAFE 910
Query: 279 FHMLLLQKNCAP 290
+ ++ KN P
Sbjct: 911 LYASMINKNVVP 922
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 60/310 (19%), Positives = 116/310 (37%), Gaps = 33/310 (10%)
Query: 5 KEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEK 62
K FV DS Y+ I + + FE + + + TYT L+ + A ++
Sbjct: 447 KGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQ 506
Query: 63 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 122
A F+ + + N + N + Y ++ Y+ +V + E + + P++ TY I
Sbjct: 507 ARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALID 566
Query: 123 SCAATLNIDQVKKFLDEMSCDSGGSD---------------DWVKYVNLVNIYITASHLV 167
ID+ + M D SD + + Y LV+ A+ +
Sbjct: 567 GHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVE 626
Query: 168 NAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICI 227
A L + + I YD LI + G + +++ KM+ R Y
Sbjct: 627 EAH-ELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVF-------VKMSERGYCPN 678
Query: 228 LSSYLML-------GHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 280
L +Y L L V +++ + +++ + ++ ++ VG TE+A
Sbjct: 679 LYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTP-NVVIYTDMIDGLCKVGKTEEAYRLM 737
Query: 281 MLLLQKNCAP 290
+ + + C P
Sbjct: 738 LKMEEVGCYP 747
>gi|356574297|ref|XP_003555285.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Glycine max]
Length = 794
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 110/252 (43%), Gaps = 18/252 (7%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV-EKVALVVEEI 105
YT+L+ YA K A ++F ++K+ + YN ++ +Y +G K+ +V+++
Sbjct: 182 YTSLITAYANNKKYRDALKVFGKMKEVGCEPTLITYNAILNVYGKMGMPWAKIIALVQDM 241
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K + PD+ TYN IS C A ++ +E+ +G D V Y L+++Y S
Sbjct: 242 KCHGLAPDLCTYNTLISCCRAGSLYEEALDLFEEIKV-AGFRPDAVTYNALLDVY-GKSR 299
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN-- 223
L + E + + +TY+ L+ Y G + + + K+KM +
Sbjct: 300 RPKEAMEVLKQMESNSFRPSVVTYNSLVSAYVRGG-------LLEDALVLKRKMVDKGIK 352
Query: 224 -----YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 278
Y +LS ++ G + E+ ++ ++ +I N L+ + D G E+ +
Sbjct: 353 PDVYTYTTLLSGFVNAGKEELAMEVFEEMRKVGCKP-NICTFNALIKMYGDRGKFEEMVK 411
Query: 279 FHMLLLQKNCAP 290
+ C+P
Sbjct: 412 VFKEIKVCKCSP 423
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 1/124 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T A+L +Y K KA E+ + +S L+ + YN +M +Y K + EI
Sbjct: 602 TSNAMLSIYGRKKMVPKANEILNFMYESGLTLSLTSYNSLMYMYSRTENFHKSEQIFREI 661
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K + PD+ +YN+ I + +D+ K+ ++EM + D V Y + Y S
Sbjct: 662 LDKGIEPDVISYNIVIYAYCRNDMMDEAKRIIEEMKVPA-PVPDVVTYNTFIAAYAADSM 720
Query: 166 LVNA 169
V A
Sbjct: 721 FVEA 724
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 109/250 (43%), Gaps = 13/250 (5%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L+ E+A +LFE +K + +A+ YN ++ +Y + ++ V++++
Sbjct: 252 TYNTLISCCRAGSLYEEALDLFEEIKVAGFRPDAVTYNALLDVYGKSRRPKEAMEVLKQM 311
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ + P + TYN +S+ ++ +M D G D Y L+ S
Sbjct: 312 ESNSFRPSVVTYNSLVSAYVRGGLLEDALVLKRKM-VDKGIKPDVYTYTTLL------SG 364
Query: 166 LVNAESSTLV-----EAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 220
VNA L E K + T++ LI +Y G +++ +++K +++ K
Sbjct: 365 FVNAGKEELAMEVFEEMRKVGCKPNICTFNALIKMYGDRGKFEEMVKVFKEIKVCKCSPD 424
Query: 221 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 280
+ +L+ + G EV + ++ K+S + + N L+ A+ G ++A +
Sbjct: 425 IVTWNTLLAVFGQNGMDSEVSGVFEEMKRSRFAP-ERDTFNTLISAYGRCGSFDQAMAAY 483
Query: 281 MLLLQKNCAP 290
+L+ +P
Sbjct: 484 KRMLEAGVSP 493
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/253 (16%), Positives = 110/253 (43%), Gaps = 11/253 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY ALL +Y ++ ++A E+ ++++ ++ + + YN +++ Y+ G +E ++ ++
Sbjct: 287 TYNALLDVYGKSRRPKEAMEVLKQMESNSFRPSVVTYNSLVSAYVRGGLLEDALVLKRKM 346
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K + PD++TY +S + + +EM G + + L+ +Y
Sbjct: 347 VDKGIKPDVYTYTTLLSGFVNAGKEELAMEVFEEMR-KVGCKPNICTFNALIKMYGDRGK 405
Query: 166 LVNAESSTLVEAEKSI----TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 221
+V+ K I +T++ L+ ++ G ++ +++ ++ ++
Sbjct: 406 F-----EEMVKVFKEIKVCKCSPDIVTWNTLLAVFGQNGMDSEVSGVFEEMKRSRFAPER 460
Query: 222 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 281
+ ++S+Y G + + ++ S D+S N +L + GL E++ +
Sbjct: 461 DTFNTLISAYGRCGSFDQAMAAYKRMLEAGVSP-DLSTYNAVLATLARGGLWEQSEKVLA 519
Query: 282 LLLQKNCAPTNAS 294
+ C P +
Sbjct: 520 EMKDGGCKPNEVT 532
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 36/186 (19%), Positives = 81/186 (43%), Gaps = 2/186 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY++LLH YA + E+ L E + + +A++ ++ + V + + E
Sbjct: 532 TYSSLLHAYANGREVERMNALAEEIYSGTIKTHAVLLKTLVLVNSKVDLLVETERAFLEF 591
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+++ + PD+ T N +S + + + L+ M +SG + Y +L+ +Y +
Sbjct: 592 RKRGISPDVTTSNAMLSIYGRKKMVPKANEILNFMY-ESGLTLSLTSYNSLMYMYSRTEN 650
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+E +K I + I+Y+ +I Y D+ +I + +++ Y
Sbjct: 651 FHKSEQIFREILDKGI-EPDVISYNIVIYAYCRNDMMDEAKRIIEEMKVPAPVPDVVTYN 709
Query: 226 CILSSY 231
+++Y
Sbjct: 710 TFIAAY 715
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 48/248 (19%), Positives = 105/248 (42%), Gaps = 5/248 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY A+L A E++E++ +K N + Y+ ++ Y + +VE++ + EEI
Sbjct: 497 TYNAVLATLARGGLWEQSEKVLAEMKDGGCKPNEVTYSSLLHAYANGREVERMNALAEEI 556
Query: 106 KRKNV-VPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+ + L + + L ++ + FL+ G S D +++IY
Sbjct: 557 YSGTIKTHAVLLKTLVLVNSKVDLLVETERAFLEFRK--RGISPDVTTSNAMLSIYGRKK 614
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
+ A E +T +Y+ L+ +Y+ N K +QI++ + + +Y
Sbjct: 615 MVPKANEILNFMYESGLTL-SLTSYNSLMYMYSRTENFHKSEQIFREILDKGIEPDVISY 673
Query: 225 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 284
++ +Y + E II++ K A D+ N + A++ + +A + ++
Sbjct: 674 NIVIYAYCRNDMMDEAKRIIEEMKVPAPVP-DVVTYNTFIAAYAADSMFVEAIDVIRYMI 732
Query: 285 QKNCAPTN 292
++ C P +
Sbjct: 733 KQGCKPNH 740
>gi|308082018|ref|NP_001183846.1| uncharacterized protein LOC100502439 [Zea mays]
gi|238014984|gb|ACR38527.1| unknown [Zea mays]
gi|414872746|tpg|DAA51303.1| TPA: hypothetical protein ZEAMMB73_971718 [Zea mays]
Length = 623
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 58/102 (56%), Gaps = 3/102 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT ++H A T++A + F++VKQ + +A YN ++ + G+++ VVEE+
Sbjct: 373 TYTIVMHALGKAGRTQEALDTFDKVKQDGCALDASFYNCLIYILCRAGRLQDANFVVEEM 432
Query: 106 KRKNVVPDIFTYNLWIS-SCAATLNIDQVKKF--LDEMSCDS 144
R + P++ T+N IS +C +L + +K ++E SC+
Sbjct: 433 HRTGISPNLTTFNTLISAACDHSLAENALKLLVQMEEQSCNP 474
>gi|255549482|ref|XP_002515794.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545122|gb|EEF46633.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 924
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 83/187 (44%), Gaps = 2/187 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT ++H YA T KA E F +++ L + Y ++ G+++ V +E+
Sbjct: 658 TYTTIMHGYAALGDTGKAFEYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEM 717
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+N+ + F YN+ I A ++ + + +M G D Y + +N A
Sbjct: 718 SAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQMK-QGGVKPDIHTYTSFINACCKAGD 776
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
++ A S + E E S + TY LI +A +K + ++ +++ K Y
Sbjct: 777 MLRA-SKMMEEMETSGVKPNVKTYTTLIHGWARASLPEKALRCFQEMKLAGLKPDKAVYH 835
Query: 226 CILSSYL 232
C++++ L
Sbjct: 836 CLMTALL 842
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 89/205 (43%), Gaps = 2/205 (0%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y +++ Y ++AE L ++ + +Y+ MM Y VG EK V E +K
Sbjct: 414 YGNMIYAYCQTCNMDQAEALVREMEGEGIDAPIDIYHTMMDGYTMVGNEEKCLTVFERLK 473
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
P + +Y I+ A I + + + +M +G + Y L+N ++
Sbjct: 474 ECGFAPSVVSYGCLINLYAKVGKISKALE-VSKMMESAGIKHNMKTYSMLINGFLKLKDW 532
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 226
NA + + K + + Y+ +I + G+G D+ + K ++ + + TSR ++
Sbjct: 533 ANA-FAIFEDVVKDGLKPDVVLYNNIIRAFCGMGTMDRAICMVKEMQKERHRPTSRTFMP 591
Query: 227 ILSSYLMLGHLKEVGEIIDQWKQSA 251
I+ + G +K ++ D ++S
Sbjct: 592 IIHGFARAGEMKRALDVFDMMRRSG 616
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 116/279 (41%), Gaps = 18/279 (6%)
Query: 3 THKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWT 60
+ +E+ L S YA R D+ H + FE + TS YT+L+H YA +
Sbjct: 305 SRREYGLMVSYYARRGDM-------HRARQTFESMRARGIEPTSHVYTSLIHAYAVGRDM 357
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
E+A ++K+ + + + Y+ ++ + +G + +E K ++ + Y
Sbjct: 358 EEALSCARKMKEEGVEMSLVTYSIIVGGFAKIGNADAADRWFKEAKDRHSHMNAIIYGNM 417
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK- 179
I + T N+DQ + + EM + G D +++ + + +V E L E+
Sbjct: 418 IYAYCQTCNMDQAEALVREMEGE--GID---APIDIYHTMMDGYTMVGNEEKCLTVFERL 472
Query: 180 --SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHL 237
++Y LI LYA +G K ++ K + K + Y +++ +L L
Sbjct: 473 KECGFAPSVVSYGCLINLYAKVGKISKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDW 532
Query: 238 KEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
I + + D+ N ++ AF +G ++A
Sbjct: 533 ANAFAIFEDVVKDGLKP-DVVLYNNIIRAFCGMGTMDRA 570
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 42/234 (17%), Positives = 105/234 (44%), Gaps = 3/234 (1%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 102
TS T+ ++H +A A ++A ++F+ +++S +N ++ + Q+EK ++
Sbjct: 585 TSRTFMPIIHGFARAGEMKRALDVFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEIL 644
Query: 103 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 162
+E+ V P+ TY + AA + + ++ ++ D G D Y L+
Sbjct: 645 DEMALAGVSPNEHTYTTIMHGYAALGDTGKAFEYFTKLR-DEGLQLDVYTYEALLKACCK 703
Query: 163 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 222
+ + +A + T + ++I + ++ Y+ LI +A G+ + + + ++ K
Sbjct: 704 SGRMQSALAVTKEMSAQNIPRNTFV-YNILIDGWARRGDVWEAADLMQQMKQGGVKPDIH 762
Query: 223 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
Y +++ G + +++++ + S ++ L+ ++ L EKA
Sbjct: 763 TYTSFINACCKAGDMLRASKMMEEMETSGVKP-NVKTYTTLIHGWARASLPEKA 815
>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
Length = 524
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 63/118 (53%), Gaps = 1/118 (0%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 102
T+ TYT+L+++++ ++ + LF + + + +MYN ++ + + G +E+ ++
Sbjct: 323 TAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIM 382
Query: 103 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
E+++K + PD TYN + +D+ + +DEM+ G D V Y L++ Y
Sbjct: 383 AEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMT-KRGIQPDLVSYNTLISGY 439
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 108/252 (42%), Gaps = 5/252 (1%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMM-TLYMSVGQVEKVA 99
A ++ Y AL+ Y + A + E + Q ++ YN +M L+M + A
Sbjct: 216 APSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYA 275
Query: 100 LVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 159
V+EE+++ PD+FTYN+ I+ N + + +EMS G V Y +L+ +
Sbjct: 276 -VLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMS-QKGVRATAVTYTSLIYV 333
Query: 160 YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 219
+ + + V +K I + + Y+ LI + G+ ++ +I + +
Sbjct: 334 FSRKGQVQETDRLFNVAVKKGI-RPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPP 392
Query: 220 TSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 279
Y ++ + +LG L E +ID+ + D+ + N L+ +S G + A
Sbjct: 393 DDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQP-DLVSYNTLISGYSMKGDIKDALRV 451
Query: 280 HMLLLQKNCAPT 291
++ K PT
Sbjct: 452 RDEMMDKGFNPT 463
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 116/292 (39%), Gaps = 45/292 (15%)
Query: 37 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 96
LPL T L HL A K +A EL ++ + N A+ YN ++ + + G+V+
Sbjct: 112 LPLCTTTFNIM--LRHLCATGKPV-RALELLRQMPRPN----AVTYNTVIAGFCARGRVQ 164
Query: 97 KVALVVEEIK-RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM--------------- 140
V+ E++ R + PD +TY IS ++ K DEM
Sbjct: 165 AALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNA 224
Query: 141 ----SCDSGGSDDWVKY------------VNLVNIYITASHLVNAESS----TLVEAEKS 180
CD G D ++Y V N+ + A ++A +S L E +K+
Sbjct: 225 LIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHA-LFMDARASDAYAVLEEMQKN 283
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 240
TY+ LI Y GN+ K ++++ + + T+ Y ++ + G ++E
Sbjct: 284 GFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQET 343
Query: 241 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 292
+ + + D+ N L+ + G E+A E + +K P +
Sbjct: 344 DRLFNVAVKKGIRP-DVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDD 394
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 58/112 (51%), Gaps = 1/112 (0%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y AL++ + E+A E+ +++ + + + YN +M + +G++++ +++E+
Sbjct: 362 YNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMT 421
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 158
++ + PD+ +YN IS + +I + DEM D G + + Y L+
Sbjct: 422 KRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEM-MDKGFNPTLMTYNALIQ 472
>gi|15221411|ref|NP_177623.1| plastid transcriptionally active 2 [Arabidopsis thaliana]
gi|75194055|sp|Q9S7Q2.1|PP124_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74850, chloroplastic; AltName: Full=Protein PLASTID
TRANSCRIPTIONALLY ACTIVE 2; Flags: Precursor
gi|5882738|gb|AAD55291.1|AC008263_22 Contains 3 PF|01535 DUF17 domains [Arabidopsis thaliana]
gi|12323908|gb|AAG51934.1|AC013258_28 hypothetical protein; 81052-84129 [Arabidopsis thaliana]
gi|332197518|gb|AEE35639.1| plastid transcriptionally active 2 [Arabidopsis thaliana]
Length = 862
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 107/246 (43%), Gaps = 4/246 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG-QVEKVALVVEE 104
+YTAL++ Y E + EL +R+K +S + L YN ++ G E + + E
Sbjct: 178 SYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAE 237
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
++ + + PDI TYN +S+CA D+ + M+ D G D Y +LV +
Sbjct: 238 MRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMN-DGGIVPDLTTYSHLVETFGKLR 296
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
L L E + +Y+ L+ YA G+ + ++ ++ + Y
Sbjct: 297 RLEKV-CDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTY 355
Query: 225 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 284
+L+ + G +V ++ + K S T D D + N L+ F + G ++ ++
Sbjct: 356 SVLLNLFGQSGRYDDVRQLFLEMKSSNT-DPDAATYNILIEVFGEGGYFKEVVTLFHDMV 414
Query: 285 QKNCAP 290
++N P
Sbjct: 415 EENIEP 420
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 96/245 (39%), Gaps = 39/245 (15%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
YT ++ L +K E+F+ + +S + Y ++ Y G+ E +++ +K
Sbjct: 144 YTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMK 203
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
+ + P I TYN I++CA G DW + L
Sbjct: 204 NEKISPSILTYNTVINACAR-------------------GGLDWEGLLGL---------- 234
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 226
E Q +TY+ L+ A G D+ + +++++ Y
Sbjct: 235 -------FAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSH 287
Query: 227 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG-LTEKANEFHMLLLQ 285
++ ++ L L++V +++ + S S DI++ N LL A++ G + E FH +
Sbjct: 288 LVETFGKLRRLEKVCDLLGEMA-SGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQ-MQA 345
Query: 286 KNCAP 290
C P
Sbjct: 346 AGCTP 350
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 51/102 (50%)
Query: 42 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 101
+ TY+ LL+L+ + + +LF +K SN +A YN ++ ++ G ++V +
Sbjct: 350 PNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTL 409
Query: 102 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCD 143
++ +N+ PD+ TY I +C + +K L M+ +
Sbjct: 410 FHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTAN 451
>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 643
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 74/138 (53%), Gaps = 5/138 (3%)
Query: 23 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 82
K F +H E +G+ T TYT+L+++ + + A++LFE++ + S + +M+
Sbjct: 429 KAFNLHD-EMISKGI---QPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMF 484
Query: 83 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 142
N ++ + + G +++ +++E+ ++N+VPD TYN + +++ ++ L EM
Sbjct: 485 NALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMK- 543
Query: 143 DSGGSDDWVKYVNLVNIY 160
G D + Y L++ Y
Sbjct: 544 RRGIRPDHISYNTLISGY 561
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 1/117 (0%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
S TY +L+ E+A + E++K+ L A+ YN ++ Y + G + K +
Sbjct: 306 SYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRD 365
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
E+ R+ ++P + TYNL I + +D+ + +M DSG D + Y L+N Y
Sbjct: 366 EMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMG-DSGIVPDSITYNILINGY 421
Score = 44.3 bits (103), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 63/129 (48%), Gaps = 2/129 (1%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVK 71
Y + I +++K + + + FE + + + + AL+ + ++A L + +
Sbjct: 449 YTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMD 508
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
+ N+ + + YN +M G+VE+ +++E+KR+ + PD +YN IS + +I+
Sbjct: 509 KRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDIN 568
Query: 132 QVKKFLDEM 140
DEM
Sbjct: 569 DAFTIRDEM 577
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 57/289 (19%), Positives = 111/289 (38%), Gaps = 40/289 (13%)
Query: 39 LSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV 98
L K+S + L+ K + A E F+ +K+ + +N M++L++ + Q E V
Sbjct: 161 LGTKSSIVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETV 220
Query: 99 ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 158
++ E+ R + ++T+N+ I+ + + K F+ M + G + V Y +++
Sbjct: 221 WVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSME-NLGVKPNVVTYNTVIH 279
Query: 159 IYITASHLVNA---------------------------------ESSTLVEAEKSIT-QR 184
Y + + A E+S ++E K I
Sbjct: 280 GYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLP 339
Query: 185 QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM--TSRNYICILSSYLMLGHLKEVGE 242
+TY+ LI Y G D + M ++ + T Y ++ + + G + E
Sbjct: 340 TAVTYNTLIDGYCNKG--DLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADG 397
Query: 243 IIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 291
+I S I+ N L+ + G +KA H ++ K PT
Sbjct: 398 MIKDMGDSGIVPDSITY-NILINGYCRCGNAKKAFNLHDEMISKGIQPT 445
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 47/112 (41%), Gaps = 1/112 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L+ E+A EL + +K+ + + + YN +++ Y G + + +E+
Sbjct: 518 TYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEM 577
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 157
P + TYN I D ++ L EM G + D Y +L+
Sbjct: 578 LSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEM-VSKGITPDDSTYFSLI 628
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/242 (19%), Positives = 102/242 (42%), Gaps = 3/242 (1%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVK 71
Y+ ID + K + E + S T + TY+AL+H A E+AE++ R+
Sbjct: 165 YSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMA 224
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
S + + ++Y+ ++ + G++ + ++E++++ PD+ TYN I I
Sbjct: 225 GSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIA 284
Query: 132 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 191
+ + LD+M D V Y ++N + LV A+ L K+ +TY
Sbjct: 285 EAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQ-KLLDRMCKAGCNPDVVTYTT 343
Query: 192 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 251
+I G ++ + + + ++ Y ++S + E ++++ + +
Sbjct: 344 IIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAG 403
Query: 252 TS 253
Sbjct: 404 CP 405
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 98/229 (42%), Gaps = 9/229 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYTAL+ +A AK E+A +L E +++ N + YN ++ + V VV+++
Sbjct: 59 TYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKM 118
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
P++ T+N + N+D +K L M G + V Y L++ +
Sbjct: 119 IEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMV-AKGMRPNVVTYSALIDGLCKSQK 177
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN-- 223
+ A+ L E + S TY LI GL DKI++ + LR + +
Sbjct: 178 FLEAK-EVLEEMKASGVTPDAFTYSALI---HGLCKADKIEEAEQMLRRMAGSGCTPDVV 233
Query: 224 -YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 271
Y I+ ++ G L E + + + ++ S D+ N ++ +G
Sbjct: 234 VYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSP-DVVTYNTVIDGLCKLG 281
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 60/127 (47%), Gaps = 3/127 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT ++ E+AE L + +K++ + N + Y +++ +V++ V+EE+
Sbjct: 340 TYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEM 399
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGG--SDDWVKYVNLVNIYITA 163
+ P++ TYN ++ + I + ++ + M D S D Y +VN +++
Sbjct: 400 RNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMK-DGRAECSPDAATYRTIVNALMSS 458
Query: 164 SHLVNAE 170
+ AE
Sbjct: 459 DLVQEAE 465
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 43/230 (18%), Positives = 92/230 (40%), Gaps = 10/230 (4%)
Query: 63 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 122
A EL E +K + + +A + ++T + G ++ ++ ++ P++ TY I+
Sbjct: 9 ALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGA---MDHLRSMGCDPNVVTYTALIA 65
Query: 123 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT 182
+ A +++ K L+EM + G + V Y LV+ S +V A + + +
Sbjct: 66 AFARAKKLEEAMKLLEEMR-ERGCPPNLVTYNVLVDALCKLS-MVGAAQDVVKKMIEGGF 123
Query: 183 QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 242
+T++ L+ + GN D ++ + + Y ++ E E
Sbjct: 124 APNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKE 183
Query: 243 IIDQWKQSATSD--FDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
++++ K S + F SA L+ E+A + + C P
Sbjct: 184 VLEEMKASGVTPDAFTYSA---LIHGLCKADKIEEAEQMLRRMAGSGCTP 230
>gi|224081503|ref|XP_002306437.1| predicted protein [Populus trichocarpa]
gi|222855886|gb|EEE93433.1| predicted protein [Populus trichocarpa]
Length = 462
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 91/200 (45%), Gaps = 2/200 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT L+ AK +A+ L +K+ L +A +YN +M Y + + + + +++
Sbjct: 231 TYTILIDNVCNAKNIREADRLVAVLKECGLKPDAFLYNTIMKGYCLLNKGIEAVRIYKQM 290
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K + V PD+ TYN I + + + KK L M +SG D V Y +L+N
Sbjct: 291 KEEGVEPDLVTYNTLIFGLSKCGRVSEAKKLLKIM-VESGHFPDAVTYTSLMNGMCREGD 349
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
++ A ++ L E E TY+ L+ + +K +++ ++ K+ + +Y
Sbjct: 350 VLGA-AALLEEMELKGCSPNSCTYNTLLHGFCKGRRLNKGVELYGVIKKGGMKLETASYA 408
Query: 226 CILSSYLMLGHLKEVGEIID 245
+ + G + E E+ D
Sbjct: 409 TFVRALCREGRVAEAYEVFD 428
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 56/123 (45%), Gaps = 1/123 (0%)
Query: 91 SVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDW 150
S G+V+ L+V+E K+ PD FTYN + + + V F+DEM D
Sbjct: 170 SAGRVDDAILLVKEFSSKHSKPDTFTYNFLVKCLCKSRIFNSVYSFIDEMKSSFDIKPDL 229
Query: 151 VKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK 210
V Y L++ A ++ A+ V E + ++ Y+ ++ Y L + +I+K
Sbjct: 230 VTYTILIDNVCNAKNIREADRLVAVLKECGLKPDAFL-YNTIMKGYCLLNKGIEAVRIYK 288
Query: 211 SLR 213
++
Sbjct: 289 QMK 291
>gi|357146655|ref|XP_003574066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g13630-like [Brachypodium distachyon]
Length = 795
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 92/195 (47%), Gaps = 3/195 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY+ L+H + ++A +LFERV + + + YN ++ Y +G +V +++ +
Sbjct: 275 TYSTLIHGLCKIGFLDEAVDLFERVTEEGMKLETVTYNSLINGYRLLGLTREVPKIIQFM 334
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ + + PDI TY + I+ + ++++ K +++ D G + V Y L+N
Sbjct: 335 RYQGIEPDIVTYTILIAGHCESGDVEEGMKIRNDI-LDQGLQLNIVTYSVLLNALFKKG- 392
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM-TSRNY 224
LV+ + L E I Y LI Y LG ++ ++ + +++ + TS N+
Sbjct: 393 LVHEAENLLGEIHSIGLDMDIIAYSILIHGYCKLGEIERALEVCDVMCCSQKVVPTSLNH 452
Query: 225 ICILSSYLMLGHLKE 239
+ IL G L E
Sbjct: 453 LSILVGLCKKGLLVE 467
Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 91/226 (40%), Gaps = 7/226 (3%)
Query: 42 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 101
T T ++L+ Y + AE F ++ S+L + Y +M G+V + +
Sbjct: 517 PTIVTCNSILYGYCKCGDLQAAESYFRAIQISSLLPTMVTYTTLMDALSEAGKVNTMLSI 576
Query: 102 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 161
+ E+ K + P+ TY++ I L FLD M G + D V Y L+ +
Sbjct: 577 LYEMVEKGIKPNAITYSVVIKGLCKELRFHDAIHFLDNMH-GEGVNADPVTYNTLIQGFC 635
Query: 162 TASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 221
+ A I +TY+FLI + G + + + +SLR ++
Sbjct: 636 EVQDIQMAFHIHDRMVYCGIVPTP-VTYNFLINVLCLKGQVIQAEYLLESLRERGIELRK 694
Query: 222 RNYICILSSYLMLGHLKEV----GEIIDQWKQSATSDFDISACNRL 263
Y ++ + G E G+++D ++ DF +A NRL
Sbjct: 695 FAYTTLIKAECAKGMPYEAISLFGKLLDDGFETTVKDFS-AAINRL 739
>gi|302762967|ref|XP_002964905.1| hypothetical protein SELMODRAFT_167316 [Selaginella moellendorffii]
gi|300167138|gb|EFJ33743.1| hypothetical protein SELMODRAFT_167316 [Selaginella moellendorffii]
Length = 773
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/291 (19%), Positives = 117/291 (40%), Gaps = 45/291 (15%)
Query: 2 VTHKEFVLSDSDYATRID--LMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKW 59
+T ++F L ++A R D ++F +Y + T YT ++ +
Sbjct: 44 LTMQDFSLIFREFAARSDWHRALRLF------KYMQRQQWCKPTEHIYTIMIGIMGREGL 97
Query: 60 TEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNL 119
EK E+FE + ++++ +N + ++ Y GQ E ++ +K++ V P++ TYN
Sbjct: 98 LEKCSEIFEDMPENDVKWNVYAFTALINAYGRNGQYEASLHLLARMKKEQVEPNLITYNT 157
Query: 120 WISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK 179
+++C S G DW L+N++ H
Sbjct: 158 VLNAC-------------------SKGGLDW---EGLLNLFAQMRH-------------- 181
Query: 180 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 239
Q ITY+ L+ + G ++ ++K++ + + Y ++ ++ L
Sbjct: 182 EGIQPDLITYNTLLSACSSRGLVEQAAMVFKTMNESGVVADAVTYKSLVDTFAGSNQLGR 241
Query: 240 VGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
V E++ + + DI+ N L+ A++D G A + + CAP
Sbjct: 242 VEELLREMEDEGNPP-DIAGYNSLIEAYADAGNVHGAAGVFKQMQRGGCAP 291
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 57/281 (20%), Positives = 107/281 (38%), Gaps = 4/281 (1%)
Query: 12 SDYATRIDLMTKVFGIHSGERYFEGLPLS--AKTSETYTALLHLYAGAKWTEKAEELFER 69
+ Y + I+ +H F+ + A ETY+ LL +Y E+ LF
Sbjct: 259 AGYNSLIEAYADAGNVHGAAGVFKQMQRGGCAPDVETYSTLLRIYGNQGCFEQVRSLFSD 318
Query: 70 VKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLN 129
+K + YN ++ ++ G ++ + ++ V PD TY+ +S C
Sbjct: 319 MKDLSTPPTVATYNSLIQVFGEGGYFQESINLFHDMVDSGVKPDDATYSALLSVCGRGGL 378
Query: 130 IDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITY 189
+ K M + + L++ Y + +A S E + Q Y
Sbjct: 379 TREAAKIHQHMLTNE-STPSLEASAGLISSYGKMAMYKDALVSYYRIREAGLDP-QVSAY 436
Query: 190 DFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQ 249
D LI YA G + ++ + + ++ +Y +G E E + +Q
Sbjct: 437 DALIQGYAKGGLYVEAGSTLYAMNKAGFQAPVSSVNSVMEAYSKVGLHDEALEFFSELQQ 496
Query: 250 SATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
S+ D LLG + D+GL E+A E +++ + + P
Sbjct: 497 KEGSEVDERTHETLLGVYCDMGLLEEAKEEFVIIKETSKVP 537
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 59/286 (20%), Positives = 102/286 (35%), Gaps = 58/286 (20%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY +L+ +AG+ + EEL ++ + YN ++ Y G V A V +++
Sbjct: 225 TYKSLVDTFAGSNQLGRVEELLREMEDEGNPPDIAGYNSLIEAYADAGNVHGAAGVFKQM 284
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS------------------------ 141
+R PD+ TY+ + +QV+ +M
Sbjct: 285 QRGGCAPDVETYSTLLRIYGNQGCFEQVRSLFSDMKDLSTPPTVATYNSLIQVFGEGGYF 344
Query: 142 ----------CDSGGSDDWVKYVNLVNIYITAS----------HLVNAESSTLVEAEKSI 181
DSG D Y L+++ H++ ES+ +EA
Sbjct: 345 QESINLFHDMVDSGVKPDDATYSALLSVCGRGGLTREAAKIHQHMLTNESTPSLEASAG- 403
Query: 182 TQRQWITYDFLIILYAGLG-NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 240
LI Y + KD + ++ +R Y ++ Y G E
Sbjct: 404 ----------LISSYGKMAMYKDALVSYYR-IREAGLDPQVSAYDALIQGYAKGGLYVEA 452
Query: 241 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 286
G + + A +S+ N ++ A+S VGL ++A EF L QK
Sbjct: 453 GSTLYAMNK-AGFQAPVSSVNSVMEAYSKVGLHDEALEFFSELQQK 497
>gi|302753488|ref|XP_002960168.1| hypothetical protein SELMODRAFT_402234 [Selaginella moellendorffii]
gi|300171107|gb|EFJ37707.1| hypothetical protein SELMODRAFT_402234 [Selaginella moellendorffii]
Length = 585
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 129/280 (46%), Gaps = 14/280 (5%)
Query: 5 KEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAE 64
K F + D DY ++D V ++ E F LP KT E Y +L + + EKA
Sbjct: 110 KAFEIDDRDYVLQVDYYAHV-DMYLAEMAFNRLPDDKKTEEAYNYILAGFVRNRMLEKAV 168
Query: 65 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNV--VPDIFTYNLWIS 122
+ +++++ L +A +M L+ +G ++ +V E + + P +LWI
Sbjct: 169 VVMDKIRELGL-VSAFSLEQMTLLFHYLGLERRIPALVVEARSLGLHFHPHFLNTHLWIK 227
Query: 123 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT 182
L+ +++ ++E+ G S+ W Y+ + + YI A L + L AE I
Sbjct: 228 RRHGDLS--GMEEIVEELEL-MGRSNAWT-YIFIASAYIQAG-LPEKAHAALGAAEAGIR 282
Query: 183 ----QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLK 238
++Q Y+ +++LY L + + I+++W L ++ + N++ ++ + G++
Sbjct: 283 NGRFKKQRKVYNKILLLYGLLKDTEGIERVWGILN-SRPLVAVHNHLFMIEALGSAGNIG 341
Query: 239 EVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 278
EI ++ ++ + + GA++ GL +KA E
Sbjct: 342 RAEEIFEELRKCRGVRKEYRQFIVMAGAYTKNGLMDKATE 381
>gi|449469288|ref|XP_004152353.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Cucumis sativus]
Length = 529
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 88/203 (43%), Gaps = 13/203 (6%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
Y +LL ++A ++F + + + +A Y+ + + V V+E
Sbjct: 257 AYNSLLEALCKGGKRDEAYKMFLEMDSNGVDPDADTYSIFIRSSCQENDLHTVYRVLERT 316
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
KRKN++P++FTYN I N+++ + LDEM D W N + Y
Sbjct: 317 KRKNLLPNVFTYNCVIKKLCKDQNVEEAYQILDEMIERGVTPDTWS--YNAIQAYHCDHS 374
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
VN+ + + ++ TY+ ++ L +G D+ +++W+S M R +
Sbjct: 375 EVNSALNLVKRMDRDKCVPDKHTYNMVLKLLVRVGRFDRANEVWES-------MGKRGFY 427
Query: 226 CILSSYLMLGHLKEVGEIIDQWK 248
+S+Y ++ H G +WK
Sbjct: 428 PSVSTYAVMIH----GFCKKKWK 446
>gi|449484422|ref|XP_004156879.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Cucumis sativus]
Length = 529
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 88/203 (43%), Gaps = 13/203 (6%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
Y +LL ++A ++F + + + +A Y+ + + V V+E
Sbjct: 257 AYNSLLEALCKGGKRDEAYKMFLEMDSNGVDPDADTYSIFIRSSCQENDLHTVYRVLERT 316
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
KRKN++P++FTYN I N+++ + LDEM D W N + Y
Sbjct: 317 KRKNLLPNVFTYNCVIKKLCKDQNVEEAYQILDEMIERGVTPDTWS--YNAIQAYHCDHS 374
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
VN+ + + ++ TY+ ++ L +G D+ +++W+S M R +
Sbjct: 375 EVNSALNLVKRMDRDKCVPDKHTYNMVLKLLVRVGRFDRANEVWES-------MGKRGFY 427
Query: 226 CILSSYLMLGHLKEVGEIIDQWK 248
+S+Y ++ H G +WK
Sbjct: 428 PSVSTYAVMIH----GFCKKKWK 446
>gi|168045050|ref|XP_001774992.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673739|gb|EDQ60258.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 385
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 103/239 (43%), Gaps = 5/239 (2%)
Query: 16 TRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNL 75
T+ + K I R +EG TYTA++ A +A ++F+ + +
Sbjct: 80 TQSNQFKKALEIFESMRLYEG---CVPDKYTYTAMIKGCCEAGLYVQARKIFDEMMIEGV 136
Query: 76 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKK 135
+ + YN ++ Y G +V V+ ++ NV PD T+N I I ++++
Sbjct: 137 KPSIVTYNILIHGYGKAGLFREVERVLSTMEANNVAPDTVTWNTLIRVFGLNCKIPEMEQ 196
Query: 136 FLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIIL 195
+ + G D V +L++ Y TA ES T + + ITY+ ++
Sbjct: 197 AYEGL-LRQGLQPDMVTLNSLISAYGTAGLFEKMESVTQYMQRYNYPMTR-ITYNIIMEA 254
Query: 196 YAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSD 254
Y G D++++ WK ++ K S + +LS+Y G+ V +++ Q + +D
Sbjct: 255 YGRAGMVDQMEETWKRMKAEFVKPNSSTFCSMLSAYGRHGYWHNVEKVMRQARYFDAAD 313
>gi|224125312|ref|XP_002329774.1| predicted protein [Populus trichocarpa]
gi|222870836|gb|EEF07967.1| predicted protein [Populus trichocarpa]
Length = 310
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 109/266 (40%), Gaps = 55/266 (20%)
Query: 28 HSGER-YFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMM 86
H+ R Y +P K YTALL+ YA K EKA F+++ + + L++N +M
Sbjct: 12 HTRSREYANAIPQKLKGFMVYTALLNCYAREKDVEKAVATFKKLTDIGVMRSPLVFNILM 71
Query: 87 TLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGG 146
LY VV D TY + C +K + EM+
Sbjct: 72 YLYFQTDG--------------EVVGDWNTYCVAADRC--------LKAGIMEMAM---- 105
Query: 147 SDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR-QWITYDFLIILYAGLGNKDKI 205
+ L + E IT++ + I +D L+ LYA GNKD++
Sbjct: 106 -------------------------TMLKKLEGQITEKTKSIAFDTLLKLYARKGNKDEL 140
Query: 206 DQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLG 265
+IWKS + K+ ++ Y+ ++SS LML ++ + +W+ S + N L+
Sbjct: 141 YRIWKSDE-KRDKIYNKGYMSMISSLLMLDDIEAAEMMFKKWESRGLS-YYFRVPNILIN 198
Query: 266 AFSDVGLTEKANEFHMLLLQKNCAPT 291
A+ L EKA + K P+
Sbjct: 199 AYCRNNLLEKAGSLIDHAMMKGSEPS 224
>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 61/116 (52%), Gaps = 1/116 (0%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 102
+ + + +++ +Y E+A E+F R+K+ + +YN ++ + +++ + +V
Sbjct: 110 SEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVY 169
Query: 103 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 158
++KR P++FTYN+ + + +D KK L EMS + G D V Y +++
Sbjct: 170 RDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMS-NKGCCPDAVSYTTVIS 224
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 57/280 (20%), Positives = 105/280 (37%), Gaps = 10/280 (3%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQS 73
Y T I M +V + G E Y AL++ + A EL + +
Sbjct: 219 YTTVISSMCEVGLVKEGRELAERF---EPVVSVYNALINGLCKEHDYKGAFELMREMVEK 275
Query: 74 NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQV 133
+S N + Y+ ++ + + GQ+E + ++ ++ P+I+T + + C
Sbjct: 276 GISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDA 335
Query: 134 KKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES--STLVEAEKSITQRQWITYDF 191
++M G + V Y LV + + ++V A S S + E S R TY
Sbjct: 336 LDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIR---TYGS 392
Query: 192 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 251
LI +A G+ D IW + + Y ++ + KE +I+ +
Sbjct: 393 LINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKEN 452
Query: 252 TSDFDISACNRLLGAFSDVGLTEKANE-FHMLLLQKNCAP 290
+ + N + D G + A + F + Q C P
Sbjct: 453 CAP-SVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPP 491
>gi|413953500|gb|AFW86149.1| hypothetical protein ZEAMMB73_846563 [Zea mays]
Length = 1039
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 79/169 (46%), Gaps = 3/169 (1%)
Query: 6 EFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLS--AKTSETYTALLHLYAGAKWTEKA 63
E L + Y T I M + +HS ++ + S +++ +T+ ++ +Y +KA
Sbjct: 741 EVQLDTALYNTFIKSMLESGKLHSAVSIYDRMVSSGVSQSMQTFNTMISVYGKGGKLDKA 800
Query: 64 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 123
E+F ++ L + MY M++LY G+ ++ +L+ + +K + P ++N I++
Sbjct: 801 VEMFAAAQELGLPIDEKMYTNMLSLYGKAGRHQEASLMFKRMKEDGIRPGKISFNSMINA 860
Query: 124 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESS 172
A + + K EM D G + D Y+ L+ Y A AE +
Sbjct: 861 YATSGLFSEAKSVFQEMQ-DCGHAPDSFSYLALIRAYTEAKLYTEAEEA 908
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 76/185 (41%), Gaps = 12/185 (6%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
YT LL LY + AEE F + Q +A+ ++ Y G+ E + L +
Sbjct: 175 AYTVLLRLYGRVGKVKLAEETFLEMLQVGCEPDAVACGTLLCAYARWGRHEDMMLFYSAV 234
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ + +VP I YN ISS +V +M ++G + Y ++ +
Sbjct: 235 RGRGLVPPISVYNYMISSLQKQKLHGKVIHVWKQM-LEAGAPPNQFTYTVVIGSLVKEDL 293
Query: 166 LVNAESSTLVEAEKSITQRQWI----TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 221
L A V+ + +R+++ TY LI + G ++ ++++ M Q +
Sbjct: 294 LEEA-----VDLFGEMRRRRFVPEEATYSLLISASSRHGKGEQALRLFEE--MKGQGIAP 346
Query: 222 RNYIC 226
NY C
Sbjct: 347 SNYTC 351
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 47/242 (19%), Positives = 97/242 (40%), Gaps = 2/242 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT ++ E+A +LF +++ Y+ +++ G+ E+ + EE+
Sbjct: 280 TYTVVIGSLVKEDLLEEAVDLFGEMRRRRFVPEEATYSLLISASSRHGKGEQALRLFEEM 339
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K + + P +T ++ + + +M S D V Y L+ IY
Sbjct: 340 KGQGIAPSNYTCASLLALHCKNEDYPKALALFSDME-SSKVIPDEVIYGILIRIYGKLG- 397
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
L T E EK+ TY + ++ G+ D+ ++ +S++ K + +Y
Sbjct: 398 LYEEARQTFGEIEKAGLLNDEQTYVAMAQVHLNAGDCDRALEVLESMKTRGVKPSRFSYS 457
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 285
+L ++ + + QS D CN +L + +G +KA +LL+
Sbjct: 458 ALLRCHVAKEDVVAAEDTFRALSQSQHGLPDAFCCNDMLRLYMRLGRLDKARALVSVLLR 517
Query: 286 KN 287
++
Sbjct: 518 ED 519
Score = 37.4 bits (85), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 103/245 (42%), Gaps = 15/245 (6%)
Query: 39 LSAKTSETYTA-LLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 97
L K ++ A L+ Y AK E+A+ELF+ S AL+ N M+ + G+ E
Sbjct: 636 LGTKPDDSAVATLIVQYGQAKQLERAQELFDSASAS-FPDGALVCNAMVDAFCKCGRAED 694
Query: 98 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKK-----FLDEMSCDSGGSDDWVK 152
+ E+ + + T ++ ++ +V+ F DE+ D+ + ++K
Sbjct: 695 AYHLFMEMADQGSYRNAVTASILVTHLTKHGKFQEVENIMHGCFRDEVQLDTALYNTFIK 754
Query: 153 YVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 212
+ + + L +A S ++Q T++ +I +Y G DK +++ +
Sbjct: 755 SM------LESGKLHSAVSIYDRMVSSGVSQSMQ-TFNTMISVYGKGGKLDKAVEMFAAA 807
Query: 213 RMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGL 272
+ + + Y +LS Y G +E + + K+ IS N ++ A++ GL
Sbjct: 808 QELGLPIDEKMYTNMLSLYGKAGRHQEASLMFKRMKEDGIRPGKISF-NSMINAYATSGL 866
Query: 273 TEKAN 277
+A
Sbjct: 867 FSEAK 871
>gi|356577073|ref|XP_003556653.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 581
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 48/82 (58%)
Query: 42 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 101
++ T+T +LH +A++LF+ ++ ++ NA MYN +M Y V +V + +L+
Sbjct: 298 PSAATFTTILHALCREGNVVEAQKLFDGIQDVGIAPNAAMYNTLMDGYFKVREVGQASLL 357
Query: 102 VEEIKRKNVVPDIFTYNLWISS 123
EE++RK V PD T+N+ +
Sbjct: 358 YEEMRRKGVSPDCVTFNILVGG 379
>gi|413955492|gb|AFW88141.1| hypothetical protein ZEAMMB73_138069 [Zea mays]
Length = 1091
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/248 (19%), Positives = 108/248 (43%), Gaps = 9/248 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L++ + + +A E+++ + + +S + Y+ +M + V+ V ++ E+
Sbjct: 173 TYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVAFGKKRDVDTVLWLLNEM 232
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ + V P++++Y + I D+ L +M DSG D V + ++ + A
Sbjct: 233 EARGVKPNVYSYTICIRVLGQAARFDEAYHILGKME-DSGCKPDVVTHTVIIQVLCDAGR 291
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
L +A+ + + + S + +TY L+ G+ + ++W ++ +Y
Sbjct: 292 LSDAK-AVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYT 350
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF--HMLL 283
++ + +G + E + D+ K+ S S N L+ F + ++A E HM
Sbjct: 351 AVVDALCQVGRVDEALAVFDEMKEKGMSPEQYSY-NSLISGFLKADMFDRALELFNHM-- 407
Query: 284 LQKNCAPT 291
C P+
Sbjct: 408 --NACGPS 413
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 95/245 (38%), Gaps = 38/245 (15%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+ ++ Y + + KA + +E +K + + N ++ G++ V E+
Sbjct: 418 THVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYEL 477
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K V PD TY + I C+ D+ F +M +SG D + +L++
Sbjct: 478 KAMGVSPDTITYTMMIKCCSKASKADEAMNFFSDM-VESGCVPDVLALNSLID------- 529
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
LY G G ++ Q++ L+ K + T+ Y
Sbjct: 530 ----------------------------TLYKG-GKGNEAWQLFHKLKEMKIEPTNGTYN 560
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 285
+LS G +KEV +++++ ++ ++ N +L S G A + + +
Sbjct: 561 TLLSGLGREGKVKEVMQLLEEMTRTIYPP-NLITYNTVLDCLSKNGEVNCAIDMLYSMTE 619
Query: 286 KNCAP 290
K CAP
Sbjct: 620 KGCAP 624
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 96/209 (45%), Gaps = 9/209 (4%)
Query: 34 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 93
F+GL +S KT +Y +L+ + AE+LF +K+ + YN ++
Sbjct: 757 FKGLGVSLKTG-SYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSM 815
Query: 94 QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQ-VKKFLDEMSCDSGGSDDWVK 152
+VE++ V +E+ RK TYN IS + ++Q + + + MS G S
Sbjct: 816 RVEEMLKVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMS--EGFSPTPCT 873
Query: 153 YVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 212
Y L++ + + +V+AE + E + + Y+ L+ + GN + + Q+++
Sbjct: 874 YGPLLDGLLKSGKMVDAE-NLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFE-- 930
Query: 213 RMTKQKMTS--RNYICILSSYLMLGHLKE 239
+M +Q + ++Y ++ + G L +
Sbjct: 931 KMVEQGINPDIKSYTILIDTLCTAGRLND 959
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 53/118 (44%), Gaps = 2/118 (1%)
Query: 52 HLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVV 111
HL K E A +LF + K +S YN ++ + ++ + E+KR
Sbjct: 740 HLCKHKKALE-AHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCG 798
Query: 112 PDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 169
PD FTYNL + + ++ ++++ K EM G +V Y +++ + + L A
Sbjct: 799 PDEFTYNLILDAMGKSMRVEEMLKVQKEMH-RKGYESTYVTYNTIISGLVKSKRLEQA 855
>gi|449468059|ref|XP_004151739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 225
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 50/96 (52%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
E+Y L+ A E A ELFE++ Q L + + YN M+ + VGQV+K ++ E+
Sbjct: 87 ESYNCLIDGLCKAGKLETAWELFEKLYQEGLQSDVVTYNIMIHGFCKVGQVDKANILFEK 146
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
++ PDI TYN + + D+V K L +M
Sbjct: 147 MEENGCTPDIITYNTLLCGFCQSNKSDEVVKLLHKM 182
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/110 (20%), Positives = 55/110 (50%), Gaps = 2/110 (1%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVK 71
Y ID + K + + FE L S+ TY ++H + +KA LFE+++
Sbjct: 89 YNCLIDGLCKAGKLETAWELFEKLYQEGLQSDVVTYNIMIHGFCKVGQVDKANILFEKME 148
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 121
++ + + + YN ++ + + ++V ++ ++ ++++ PD + N+ I
Sbjct: 149 ENGCTPDIITYNTLLCGFCQSNKSDEVVKLLHKMIQRDMSPDAISCNIVI 198
>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
Length = 798
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 101/242 (41%), Gaps = 17/242 (7%)
Query: 35 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 94
+GL + K+ E LLH+ A + N S N + Y+ ++ + G+
Sbjct: 173 KGLCVEKKSQEALELLLHMTADGGY--------------NCSPNVVSYSTIIDGFFKEGE 218
Query: 95 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 154
V+K + +E+ + PD+ TY+ I +++ + L M D G + Y
Sbjct: 219 VDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMF-DKGVMPNTRTYN 277
Query: 155 NLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM 214
++ Y + L A L + S Q +TY LI Y +G + ++ S+
Sbjct: 278 IMIRGYCSLGQLEEA-VRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVR 336
Query: 215 TKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTE 274
QK S Y +L Y G L +V +++D + F+ A N L+ A++ G +
Sbjct: 337 KGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIP-FEHRAFNILICAYAKHGAVD 395
Query: 275 KA 276
KA
Sbjct: 396 KA 397
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 97/245 (39%), Gaps = 3/245 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY++L+ A+ KAE + + + + N YN M+ Y S+GQ+E+ +++++
Sbjct: 240 TYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKM 299
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ PD+ TY L I + + D M G + Y L++ Y T
Sbjct: 300 SGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSM-VRKGQKPNSTIYHILLHGYATKGA 358
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
L++ + I ++ LI YA G DK + +R + +Y
Sbjct: 359 LIDVRDLLDLMIRDGIPFEHR-AFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYS 417
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 285
++ +G +++ +Q S +I + L+ +G +K E ++
Sbjct: 418 TVIHILCKIGRVEDAVYHFNQMVSEGLSP-NIISFTSLIHGLCSIGEWKKVEELAFEMIN 476
Query: 286 KNCAP 290
+ P
Sbjct: 477 RGIHP 481
>gi|225450630|ref|XP_002278172.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial [Vitis vinifera]
gi|296089757|emb|CBI39576.3| unnamed protein product [Vitis vinifera]
Length = 586
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 122/299 (40%), Gaps = 18/299 (6%)
Query: 4 HKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSA-KTSET-YTALLHLYAGAKWTE 61
H+ F + Y I+ ++K E L S K E + ++ Y A +
Sbjct: 128 HRNFAHNYETYLAMIEKLSKARAFEPMETLISQLHKSQIKCGENLFITVIRNYGFAGRPK 187
Query: 62 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK-NVVPDIFTYNLW 120
A F R+ L + +N ++ + + + V L+ + ++K +VP++FT N+
Sbjct: 188 LAIRTFLRIPSFGLQPSVRSFNTLLNTLVQNKRFDLVHLMFKNCRKKFGIVPNVFTCNIL 247
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
+ + +ID + L+EM G + V Y ++ Y++ +V A V E
Sbjct: 248 VKALCKKNDIDAAIRVLEEMPA-MGFIPNVVTYTTILGGYVSKGDMVGARR---VFGE-- 301
Query: 181 ITQRQWI----TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGH 236
I R W+ TY L+ Y G ++ + + + Y I+ +Y
Sbjct: 302 ILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYC---K 358
Query: 237 LKEVGEIIDQWKQSATSDFDISA--CNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNA 293
K+ GE+++ + S+ C R++ + G E A E LL+KNC P NA
Sbjct: 359 EKKSGEVLNLLDDMLEKKYIPSSALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNA 417
>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
Length = 426
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 122/284 (42%), Gaps = 10/284 (3%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALL-HLYAGAKWTEKAEELFERV 70
Y T ID K+ ++ F+ + ++ TY +L+ L +W++ A + + V
Sbjct: 118 YNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMV 177
Query: 71 KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 130
+ ++ N + + ++ +++ G+ + + EE+ R+ V PD+FTYN I+ +
Sbjct: 178 MR-DIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRV 236
Query: 131 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 190
D+ K+ LD M G D V Y L+N + S V+ + E + ITY+
Sbjct: 237 DEAKQMLDLMV-TKGCLPDVVTYNTLINGF-CKSKRVDEGTKLFREMAQRGLVGDTITYN 294
Query: 191 FLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQS 250
+I Y G D +I+ + + R Y +L M +++ + + ++S
Sbjct: 295 TIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKS 351
Query: 251 ATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
+ DI+ N ++ +G E A + L K P S
Sbjct: 352 EI-ELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVS 394
>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 718
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 57/126 (45%), Gaps = 2/126 (1%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPL--SAKTSETYTALLHLYAGAKWTEKAEELFERVK 71
Y T ID + K I E F+ + L +++S TY L+ K E+A +L +++
Sbjct: 441 YNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMI 500
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
L + YN ++T + VG +EK +V+ + PDIFTY I +D
Sbjct: 501 MEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVD 560
Query: 132 QVKKFL 137
K L
Sbjct: 561 VASKLL 566
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 99/248 (39%), Gaps = 9/248 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY +L+ EKA E+ +++ S N + YN +++ ++E + +
Sbjct: 300 TYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARIL 359
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K ++PD+ T+N I + N D + +EM + G D Y L++
Sbjct: 360 VSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMK-NKGCKPDEFTYSILIDSLCYERR 418
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKI---DQIWKSLRMTKQKMTSR 222
L A L E E S R + Y+ LI GL +I ++I+ + + +S
Sbjct: 419 LKEA-LMLLKEMESSGCARNAVVYNTLI---DGLCKSRRIEDAEEIFDQMELLGVSRSSV 474
Query: 223 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 282
Y ++ ++E +++DQ D N LL F VG EKA +
Sbjct: 475 TYNTLIDGLCKNKRVEEASQLMDQMIMEGLKP-DKFTYNSLLTYFCRVGDIEKAGDIVQT 533
Query: 283 LLQKNCAP 290
+ C P
Sbjct: 534 MASNGCEP 541
Score = 40.4 bits (93), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 25/117 (21%), Positives = 60/117 (51%), Gaps = 1/117 (0%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
A+ + Y L+ ++ E AEE+F++++ +S +++ YN ++ +VE+ +
Sbjct: 435 ARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQ 494
Query: 101 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 157
+++++ + + PD FTYN ++ +I++ + M+ +G D Y L+
Sbjct: 495 LMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMA-SNGCEPDIFTYGTLI 550
>gi|297834714|ref|XP_002885239.1| EMB1270 [Arabidopsis lyrata subsp. lyrata]
gi|297331079|gb|EFH61498.1| EMB1270 [Arabidopsis lyrata subsp. lyrata]
Length = 1429
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 93/205 (45%), Gaps = 10/205 (4%)
Query: 38 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 97
P + Y A++ +Y+ + KA+EL + ++Q + + +N ++ + G +
Sbjct: 219 PTVGDRVQVYNAMMGVYSRSGKFSKAQELLDAMRQRGCVPDLISFNTLINARLKSGGLTP 278
Query: 98 --VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 155
V +++ ++ + PD TYN +S+C+ N++ K ++M D W Y
Sbjct: 279 NLVVELLDMVRNSGLRPDAITYNTLLSACSRDSNLEGAVKVFEDMEAHRCQPDLWT-YNA 337
Query: 156 LVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR-- 213
++++Y AE +E E +TY+ L+ +A N +K+ ++++ ++
Sbjct: 338 MISVYGRCGLAAEAE-RLFIELELKGFSPDAVTYNSLLYAFARERNTEKVKEVYQQMQKM 396
Query: 214 -MTKQKMTSRNYICILSSYLMLGHL 237
K +MT Y I+ Y G L
Sbjct: 397 GFGKDEMT---YNTIIHMYGKQGQL 418
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 80/187 (42%), Gaps = 1/187 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY A++ +Y +AE LF ++ S +A+ YN ++ + EKV V +++
Sbjct: 334 TYNAMISVYGRCGLAAEAERLFIELELKGFSPDAVTYNSLLYAFARERNTEKVKEVYQQM 393
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
++ D TYN I +D + +M SG + D + Y L++ A+
Sbjct: 394 QKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANR 453
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
V A ++ + E + TY LI YA G +++ + + + + K + Y
Sbjct: 454 SVEA-AALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYS 512
Query: 226 CILSSYL 232
+L L
Sbjct: 513 VMLDVLL 519
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/223 (19%), Positives = 104/223 (46%), Gaps = 3/223 (1%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
+ ++L +Y + +K ++++R+K+S L + YN ++ +Y + E+ ++++++
Sbjct: 930 WNSMLKMYTVIEDYKKTVQVYQRIKESGLEPDETTYNTLIIMYCRDRRPEEGYSLMQQMR 989
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
+ P + TY IS+ ++Q ++ +E+ G D Y ++ I +
Sbjct: 990 NLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEEL-LSKGLKLDRSFYHTMMKISRDSGSD 1048
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 226
AE L + + + T L++ Y+ GN + +++ +L+ T+ ++T+ Y
Sbjct: 1049 SKAEK-LLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKNTEVELTTLPYSS 1107
Query: 227 ILSSYLMLGHLKE-VGEIIDQWKQSATSDFDISACNRLLGAFS 268
++ +YL K + +++ K+ D I C +FS
Sbjct: 1108 VIDAYLRSKDYKSGIERLLEMKKEGLEPDHRIWTCFVRAASFS 1150
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 92/197 (46%), Gaps = 7/197 (3%)
Query: 57 AKWTEK--AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDI 114
+W ++ A E+F R + + +YN MM +Y G+ K +++ ++++ VPD+
Sbjct: 202 GRWNQESLAVEIFTRA-EPTVGDRVQVYNAMMGVYSRSGKFSKAQELLDAMRQRGCVPDL 260
Query: 115 FTYNLWISSC--AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESS 172
++N I++ + L + V + LD M +SG D + Y L++ S+L A
Sbjct: 261 ISFNTLINARLKSGGLTPNLVVELLD-MVRNSGLRPDAITYNTLLSACSRDSNLEGA-VK 318
Query: 173 TLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYL 232
+ E Q TY+ +I +Y G + ++++ L + + Y +L ++
Sbjct: 319 VFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFIELELKGFSPDAVTYNSLLYAFA 378
Query: 233 MLGHLKEVGEIIDQWKQ 249
+ ++V E+ Q ++
Sbjct: 379 RERNTEKVKEVYQQMQK 395
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 48/96 (50%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
+TY +L+ + K E+AE+LFE + L + Y+ MM + G K +++
Sbjct: 998 DTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQM 1057
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
+K + P + T +L + S +++ N + +K L +
Sbjct: 1058 MKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNL 1093
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 98/239 (41%), Gaps = 24/239 (10%)
Query: 65 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 124
EL + V+ S L +A+ YN +++ +E V E+++ PD++TYN IS
Sbjct: 283 ELLDMVRNSGLRPDAITYNTLLSACSRDSNLEGAVKVFEDMEAHRCQPDLWTYNAMISVY 342
Query: 125 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLV--EAEKSIT 182
+ ++ E+ G S D V Y +L+ + N E V + +K
Sbjct: 343 GRCGLAAEAERLFIELEL-KGFSPDAVTYNSLLYAFARER---NTEKVKEVYQQMQKMGF 398
Query: 183 QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLM--LGHLKE- 239
+ +TY+ +I +Y G D Q++K ++ ++ RN I + L+ LG
Sbjct: 399 GKDEMTYNTIIHMYGKQGQLDLALQLYKDMK----GLSGRNPDAITYTVLIDSLGKANRS 454
Query: 240 ------VGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 292
+ E++D + + C ++ G E+A + +L+ P N
Sbjct: 455 VEAAALMSEMLDVGIKPTLQTYSALIC-----GYAKAGKREEAEDTFSCMLRSGTKPDN 508
>gi|356557985|ref|XP_003547290.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Glycine max]
Length = 692
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 99/207 (47%), Gaps = 3/207 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T + +++ YA +KA L++R K N S +A+ ++ ++ +Y G +K V +E+
Sbjct: 228 TCSGMVYAYARTNNVDKAVNLYDRAKAENWSLDAVTFSTLIKMYSMAGNYDKCLEVYQEM 287
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K V P++ TYN + + + Q K EM +G S D++ Y +L+ +Y A
Sbjct: 288 KVLGVKPNVATYNTLLGAMLRSKKHRQAKAIHKEMK-SNGVSPDFITYASLLEVYTRAQC 346
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ-KMTSRNY 224
+A E + + Y+ L+ + A +G D+ +I+ ++ + + S +
Sbjct: 347 SEDA-LGVYKEMKGNGMDMTADLYNKLLAMCADVGYTDRAVEIFYEMKSSGTCQPDSWTF 405
Query: 225 ICILSSYLMLGHLKEVGEIIDQWKQSA 251
+++ Y G + EV ++++ QS
Sbjct: 406 SSLITIYSRSGKVSEVEGMLNEMIQSG 432
Score = 37.4 bits (85), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 47/99 (47%), Gaps = 1/99 (1%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSN-LSFNALMYNEMMTLYMSVGQVEKVALV 101
T++ Y LL + A +T++A E+F +K S ++ ++ ++T+Y G+V +V +
Sbjct: 365 TADLYNKLLAMCADVGYTDRAVEIFYEMKSSGTCQPDSWTFSSLITIYSRSGKVSEVEGM 424
Query: 102 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
+ E+ + P IF I D V K ++
Sbjct: 425 LNEMIQSGFQPTIFVMTSLIRCYGKAKRTDDVVKIFKQL 463
>gi|302784330|ref|XP_002973937.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
gi|300158269|gb|EFJ24892.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
Length = 823
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 102/249 (40%), Gaps = 44/249 (17%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY ALL +Y ++A EL ++ + +S N + YNE++ Y G ++ A + + +
Sbjct: 321 TYNALLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSL 380
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K + PD FTY IS A ++ +K L+
Sbjct: 381 LSKGLCPDEFTYCTLIS---AFNRAERYEKALE--------------------------- 410
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
T E K+ +TY+ LI +Y G +K+D + K + ++K + + +
Sbjct: 411 -------TFTEMRKTNCTPNIVTYNILIDIY---GRMEKLDDMMKVFKFMQEKNCTPDLV 460
Query: 226 ---CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 282
+L S+ G L EV + + K++ + N L+ + G + + + +
Sbjct: 461 TWNSLLKSFGNCGMLTEVSNVFREMKRAGYMP-GVDTFNILIECYGRCGYVDYSVDIYKG 519
Query: 283 LLQKNCAPT 291
LL+ PT
Sbjct: 520 LLRTGLQPT 528
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 49/96 (51%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
+ + A++ + A W E+A +L E ++++ L + + YN +M++Y G K V+ E
Sbjct: 636 KVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYYKAEEVMSE 695
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
++R P++ TYN + S +D + +M
Sbjct: 696 MRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDM 731
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 90/211 (42%), Gaps = 6/211 (2%)
Query: 36 GLPLSAKTSETYTALLHLYAGA-KWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 94
GL LS + L+H YA + ++ + + + E K + + ++ + Y G
Sbjct: 559 GLQLS---DACHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTFVLAYCKCGM 615
Query: 95 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 154
+ L + ++ PDI +N IS CA I++ K L+E+ + D V Y
Sbjct: 616 DNEAQLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIR-KAQLKPDGVTYN 674
Query: 155 NLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM 214
L+++Y AE + E ++ ITY+ L+ Y G D +++ +
Sbjct: 675 CLMSMYGREGMYYKAE-EVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVA 733
Query: 215 TKQKMTSRNYICILSSYLMLGHLKEVGEIID 245
+ + + + ++ SY LG KE +I+
Sbjct: 734 ARVRPDNFTFNTLVGSYSSLGLYKEALSVIE 764
Score = 43.9 bits (102), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 48/253 (18%), Positives = 109/253 (43%), Gaps = 6/253 (2%)
Query: 42 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 101
T T+ AL+ A ++ E++ + + ++ L + + ++ Y + GQ ++
Sbjct: 527 PTVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQLSDACHAGLIHSYANSGQFFQLRKY 586
Query: 102 VEEIKR--KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 159
++E+++ K + I ++ C ++ ++ + L+++ D+G S D +K N +
Sbjct: 587 IDELEKSAKQPLSGILCKTFVLAYCKCGMD-NEAQLALNQLY-DNGHSPD-IKVFNAMIS 643
Query: 160 YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 219
+ L E K+ + +TY+ L+ +Y G K +++ +R +
Sbjct: 644 MCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYYKAEEVMSEMRRAGKAP 703
Query: 220 TSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 279
Y +L SY G + + + +A D N L+G++S +GL ++A
Sbjct: 704 NLITYNTLLYSYTKHGRMDDAARVFGDM-VAARVRPDNFTFNTLVGSYSSLGLYKEALSV 762
Query: 280 HMLLLQKNCAPTN 292
+ + C PT
Sbjct: 763 IEYMTEHGCQPTQ 775
>gi|242095042|ref|XP_002438011.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
gi|241916234|gb|EER89378.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
Length = 1443
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 105/243 (43%), Gaps = 11/243 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY +LL+ +A +K E E + ++ N + YN M+ +Y +G+++ + +E+
Sbjct: 365 TYNSLLYAFAKEGNVDKVEHTCEELVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEM 424
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ PD TY + I S I + K L++M+ D+G V + L+ Y
Sbjct: 425 RAVGCTPDAVTYTVMIDSLGKMDKIAEAGKVLEDMA-DAGLKPTLVAFSALICAYAKGGR 483
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+AE T S + + Y ++ ++A G +K+ ++++++ + Y
Sbjct: 484 RADAE-KTFDCMIASGVKPDRLAYLVMLDVFARSGETEKMLRLYRTMMNDNYRPDDDMYQ 542
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 285
+L + +E+ EII D ++ C LG S + + + LL+
Sbjct: 543 VLLVALAKEDKCEEIEEII--------QDMEL-LCQMSLGVISTILIKARCVSQGGKLLK 593
Query: 286 KNC 288
K C
Sbjct: 594 KAC 596
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 82/180 (45%), Gaps = 3/180 (1%)
Query: 66 LFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCA 125
LFE V+QS L + + YN +++ +E V EE+ PD++TYN +S
Sbjct: 281 LFE-VRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEEMIASECRPDLWTYNAMVSVHG 339
Query: 126 ATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQ 185
++ ++ E+ + G D V Y +L+ + ++ E T E K+ ++
Sbjct: 340 RCGKAEEAERLFGEL-VEKGFMPDAVTYNSLLYAFAKEGNVDKVE-HTCEELVKAGFKKN 397
Query: 186 WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIID 245
ITY+ +I +Y +G D ++ +R + Y ++ S + + E G++++
Sbjct: 398 EITYNTMIHMYGKMGRLDLAVGLYDEMRAVGCTPDAVTYTVMIDSLGKMDKIAEAGKVLE 457
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 105/251 (41%), Gaps = 11/251 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L+ + + E A +FE + S + YN M++++ G+ E+ + E+
Sbjct: 295 TYNTLISACSQSSNLEDAVTVFEEMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFGEL 354
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K +PD TYN + + A N+D+V+ +E+ +G + + Y ++++Y
Sbjct: 355 VEKGFMPDAVTYNSLLYAFAKEGNVDKVEHTCEEL-VKAGFKKNEITYNTMIHMYGKMGR 413
Query: 166 LVNAESSTLVEAEKSI-TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ---KMTS 221
L A L + +++ +TY +I LG DKI + K L K T
Sbjct: 414 LDLAVG--LYDEMRAVGCTPDAVTYTVMI---DSLGKMDKIAEAGKVLEDMADAGLKPTL 468
Query: 222 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 281
+ ++ +Y G + + D S D A +L F+ G TEK +
Sbjct: 469 VAFSALICAYAKGGRRADAEKTFDCMIASGVKP-DRLAYLVMLDVFARSGETEKMLRLYR 527
Query: 282 LLLQKNCAPTN 292
++ N P +
Sbjct: 528 TMMNDNYRPDD 538
Score = 37.0 bits (84), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 35/172 (20%), Positives = 73/172 (42%), Gaps = 4/172 (2%)
Query: 81 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
++N ++ +Y + G ++ V + I + PD TYN I +L ++ L+EM
Sbjct: 922 IFNSLLNMYTAAGNFDRTTQVYQSILEAGLEPDEDTYNTLIVMYCRSLRPEEGFTLLNEM 981
Query: 141 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT-QRQWITYDFLIILYAGL 199
G + Y +L + +A + ++ L E +S + Q Y ++ +Y
Sbjct: 982 G-KRGLTPKLQSYKSL--LAASAKAELREQADQLFEEMRSKSYQLNRSIYHMMMKIYRNA 1038
Query: 200 GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 251
GN K + + ++ + T +++SY G E +++ K S+
Sbjct: 1039 GNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPHEAENVLNSLKSSS 1090
>gi|297851236|ref|XP_002893499.1| hypothetical protein ARALYDRAFT_335936 [Arabidopsis lyrata subsp.
lyrata]
gi|297339341|gb|EFH69758.1| hypothetical protein ARALYDRAFT_335936 [Arabidopsis lyrata subsp.
lyrata]
Length = 198
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 77/177 (43%), Gaps = 19/177 (10%)
Query: 16 TRIDLMTKVFGIHSGERYFEGLPLSAKT-SETYTALLHLYA-GAKWTEKAEELFERVKQS 73
R+ L+ V G+ E++FE +P + S+ YT +L Y AK EKAE +F ++++
Sbjct: 11 ARLHLIDNVLGLEEAEKFFETIPQDKRDDSDLYTTILSFYTRSAKTLEKAELIFHKMRKL 70
Query: 74 NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQV 133
+N MM+LY +G+ + V ++ ++++ N D T N+ + A +
Sbjct: 71 GYLSKPCPFNHMMSLYNQIGKRDMVHQILSQMEKNNAKSDNRTLNIILGLLAES------ 124
Query: 134 KKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 190
+ DW + Y+ +V A L AE+S+ YD
Sbjct: 125 ----------HSSTLDWRMSCEMAKTYLKQGLVVEA-IKMLRRAEESVVDPDSKKYD 170
>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
Length = 528
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 107/251 (42%), Gaps = 6/251 (2%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
A + TY+AL+ + ++A L E + + + + YN ++T + +V++
Sbjct: 106 AANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHG 165
Query: 101 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
+E++ + PDI TY I + ++ + + L E++ G + D V Y +++
Sbjct: 166 FMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVT-RRGFTPDIVTYSTVIDGL 224
Query: 161 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 220
A L +A + E S ITY+ LI Y G+ D+ ++ + K
Sbjct: 225 CKAGRLRDAVD---IFEEMSCAP-TAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPD 280
Query: 221 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 280
Y ++S++ +G L + E+ Q + S D+ L+ G E A E
Sbjct: 281 VVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSP-DVVTFTSLVDGLCGEGRMEDALELL 339
Query: 281 MLLLQKNCAPT 291
+ ++ C PT
Sbjct: 340 EEITRRGCPPT 350
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 89/208 (42%), Gaps = 10/208 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+T+L+ G E A EL E + + YN ++ Y QV K +V +
Sbjct: 318 TFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADF 377
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ + VP+ TYN+ ++ C DQ ++LD+++ + G V + I +
Sbjct: 378 RSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAI----ILDAL 433
Query: 166 LVNAESSTLVEAEKSITQRQWIT--YDFLIILYAGLGNKDKIDQIWKSL-RMTKQKMTSR 222
+ + V+ + + QR ++ F +++A L + Q + L M K T
Sbjct: 434 CRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFA-LCKAHQPQQAHELLEEMIKYGHTPG 492
Query: 223 NYIC--ILSSYLMLGHLKEVGEIIDQWK 248
C ++S+Y G +++ E+ + +
Sbjct: 493 PGTCDAVVSAYCRAGMIQKADELASELR 520
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 88/211 (41%), Gaps = 6/211 (2%)
Query: 2 VTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTE 61
VT + F Y+T ID + K + FE + A T+ TY +L+ Y A +
Sbjct: 205 VTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS-CAPTAITYNSLIGGYCRAGDMD 263
Query: 62 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 121
+A L ++ + + + Y +M+ + +G+++ + +++ + PD+ T+ +
Sbjct: 264 EAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLV 323
Query: 122 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI 181
++ + L+E++ G Y +V+ Y A+ + AE +
Sbjct: 324 DGLCGEGRMEDALELLEEIT-RRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGF 382
Query: 182 TQRQWITYDFLIILYAGLGNKDKIDQIWKSL 212
+TY+ IL AG + DQ + L
Sbjct: 383 VP-NTVTYN---ILVAGCCRAGRTDQALQYL 409
>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 485
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 121/280 (43%), Gaps = 10/280 (3%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALL-HLYAGAKWTEKAEELFERV 70
Y T ID K+ ++ F+ + ++ TY +L+ L +W++ A + + V
Sbjct: 177 YNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMV 236
Query: 71 KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 130
+ ++ N + + ++ +++ G+ + + EE+ R+ V PD+FTYN I+ +
Sbjct: 237 MR-DIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRV 295
Query: 131 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 190
D+ K+ LD M G D V Y L+N + S V+ + E + ITY+
Sbjct: 296 DEAKQMLDLMV-TKGCLPDVVTYNTLINGF-CKSKRVDEGTKLFREMAQRGLVGDTITYN 353
Query: 191 FLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQS 250
+I Y G D +I+ + + R Y +L M +++ + + ++S
Sbjct: 354 TIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKS 410
Query: 251 ATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
+ DI+ N ++ +G E A + L K P
Sbjct: 411 EI-ELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKP 449
>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 822
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 97/210 (46%), Gaps = 17/210 (8%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY++ + A+ +KAE + ++ + + + YN M+ Y +GQ ++ A + E+
Sbjct: 264 TYSSYIDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREM 323
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
R+ ++PDIFT N ++SS + +F D M+ G D V Y L++ Y +
Sbjct: 324 TRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAA-KGHKPDLVTYSVLLHGYAAEGY 382
Query: 166 LV------NAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 219
+V N+ + A+ S+ Y+ LI Y G D+ I+ ++
Sbjct: 383 VVDMLNLFNSMEGNGIVADHSV-------YNILIDAYGKRGMMDEAMLIFTQMQERGVMP 435
Query: 220 TSRNYICILSSYLMLGHLKEVGEIIDQWKQ 249
+ Y +++++ +G L + +D++ Q
Sbjct: 436 DAWTYGTVIAAFSRMGRLADA---MDKFNQ 462
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 57/117 (48%), Gaps = 3/117 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERV--KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
+Y+ +L +++A +L + K S N + YN ++ + G+V K +
Sbjct: 192 SYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFH 251
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
E+ ++ VVPD+ TY+ +I + +D+ + L +M +G D V Y +++ Y
Sbjct: 252 EMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQM-ISNGFEPDKVTYNCMIHGY 307
>gi|449435168|ref|XP_004135367.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Cucumis sativus]
Length = 962
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 89/205 (43%), Gaps = 2/205 (0%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y +++ Y +KAE L +++ + +Y+ MM Y VG +K LV E K
Sbjct: 419 YGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVFERFK 478
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
+ P + TY I+ A + + + EM +G + Y L+N ++
Sbjct: 479 ECGLNPSVITYGCLINLYAKLGKVSKALEVSKEME-HAGIKHNMKTYSMLINGFLKLKDW 537
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 226
NA + + K + + Y+ +I + G+G D+ K ++ + K T+R ++
Sbjct: 538 ANA-FAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMP 596
Query: 227 ILSSYLMLGHLKEVGEIIDQWKQSA 251
I+ + G +K+ ++ D + S
Sbjct: 597 IIHGFARKGEMKKALDVFDMMRMSG 621
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 111/272 (40%), Gaps = 11/272 (4%)
Query: 10 SDSDYATRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELF 67
S +Y ++ T+ +H FE + +S YT L+H YA + E+A
Sbjct: 310 SRKEYGLMVNYYTRRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVGRDMEEALSCV 369
Query: 68 ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAAT 127
++K+ + + + Y+ +++ + G E +E K K+ + Y I +
Sbjct: 370 RKMKEEGIEMSLVTYSILVSGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNIIYAYCQR 429
Query: 128 LNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK---SITQR 184
N+D+ + + EM + G D +++ + + +V E L+ E+
Sbjct: 430 CNMDKAEALVREM--EEEGID---APIDIYHTMMDGYTMVGDEDKCLLVFERFKECGLNP 484
Query: 185 QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEII 244
ITY LI LYA LG K ++ K + K + Y +++ +L L I
Sbjct: 485 SVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIF 544
Query: 245 DQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
+ + D+ N ++ AF +G ++A
Sbjct: 545 EDLIKDGIKP-DVVLYNNIITAFCGMGKMDRA 575
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 67/131 (51%), Gaps = 6/131 (4%)
Query: 35 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 94
EGL L T Y ALL + + A + + + N+ N +YN ++ + G
Sbjct: 690 EGLQLDVYT---YEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGD 746
Query: 95 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVK-Y 153
+ + A +++++KR+ V PDI TY +I++C+ ++ + K ++EM S G VK Y
Sbjct: 747 IWEAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMK--SVGVKPNVKTY 804
Query: 154 VNLVNIYITAS 164
L+N + AS
Sbjct: 805 TTLINGWARAS 815
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 84/188 (44%), Gaps = 4/188 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT ++H YA T KA F +++ L + Y ++ G+++ V +E+
Sbjct: 663 TYTTIMHGYASLGDTGKAFTYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEM 722
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+N+ + F YN+ I A +I + + +M + G D Y + +N A
Sbjct: 723 SAQNIPRNTFIYNILIDGWARRGDIWEAADLMQQMKRE-GVQPDIHTYTSFINACSKAGD 781
Query: 166 LVNAESSTLVEAEKSITQRQWI-TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
+ A + +E KS+ + + TY LI +A +K ++ ++++ K Y
Sbjct: 782 MQRA--TKTIEEMKSVGVKPNVKTYTTLINGWARASLPEKALSCFEEMKLSGLKPDRAVY 839
Query: 225 ICILSSYL 232
C+++S L
Sbjct: 840 HCLMTSLL 847
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 45/99 (45%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 102
T TY AL+ + EKAE++ + + + +S N Y +M Y S+G K
Sbjct: 625 TVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFTYF 684
Query: 103 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 141
+++ + + D++TY + +C + + EMS
Sbjct: 685 TKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMS 723
Score = 37.0 bits (84), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 45/240 (18%), Positives = 104/240 (43%), Gaps = 15/240 (6%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 102
T+ T+ ++H +A +KA ++F+ ++ S YN ++ + ++EK ++
Sbjct: 590 TTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQIL 649
Query: 103 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 162
+E+ V P+ TY + A+ + + + ++ D G D Y L+
Sbjct: 650 DEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFTYFTKLR-DEGLQLDVYTYEALLKACCK 708
Query: 163 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ----- 217
+ + +A + T + ++I + +I Y+ LI +A G+ IW++ + +Q
Sbjct: 709 SGRMQSALAVTKEMSAQNIPRNTFI-YNILIDGWARRGD------IWEAADLMQQMKREG 761
Query: 218 -KMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
+ Y +++ G ++ + I++ K S ++ L+ ++ L EKA
Sbjct: 762 VQPDIHTYTSFINACSKAGDMQRATKTIEEMK-SVGVKPNVKTYTTLINGWARASLPEKA 820
>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
Length = 609
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 97/214 (45%), Gaps = 4/214 (1%)
Query: 78 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFL 137
+ + Y ++ + G +EK ++ ++ + VP++ TY+ + ++DQ
Sbjct: 188 DVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLF 247
Query: 138 DEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYA 197
M+ G + V Y L++ + A+H V+A + E + ++Y+ L+ Y
Sbjct: 248 RRMT-SKGCVPNVVTYTTLIH-GLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYC 305
Query: 198 GLGNKDKIDQIWKSLRMTKQKMTSR-NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFD 256
LG ++ Q++K + K + R Y C++ + L+E +++ K +A D D
Sbjct: 306 RLGRIEEAKQLFKEM-AAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPD 364
Query: 257 ISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
+ + ++ +S +A EF ++ +N AP
Sbjct: 365 VVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAP 398
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 56/124 (45%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT L+H A + A L + + + + + YN ++ Y +G++E+ + +E+
Sbjct: 261 TYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEM 320
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K+ +PD TY + +++ + L+ M +G D V Y +V Y A
Sbjct: 321 AAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKR 380
Query: 166 LVNA 169
V A
Sbjct: 381 FVEA 384
Score = 40.4 bits (93), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 83/191 (43%), Gaps = 15/191 (7%)
Query: 108 KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLV 167
K+V PD+ TY+ I+ +D+ + L EM G + D V Y ++V+ +
Sbjct: 39 KSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMD 98
Query: 168 NAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI-C 226
A + E + + T+ LI G N K+D+ +L++ K+ +TS +
Sbjct: 99 RA-CEMVREMKLKGVEPDKFTFSALI---TGWCNARKVDE---ALKLYKEILTSSCRLDA 151
Query: 227 ILSSYLMLGHLKE--VGEIID-----QWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 279
+ SS L+ G +E +GE + + ++ D+ L+ F G EKA +
Sbjct: 152 VSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKM 211
Query: 280 HMLLLQKNCAP 290
++ + C P
Sbjct: 212 LGVMEGRKCVP 222
>gi|357159149|ref|XP_003578355.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18900-like [Brachypodium distachyon]
Length = 857
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 3/159 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L+ ++A A + E A +L+ R+++ LS + Y+ M+ GQ+ + E+
Sbjct: 436 TYCTLIDIHAKAGYLEVAMDLYGRMQEVGLSPDTFTYSAMVNCLGKGGQLAAAYKLFCEM 495
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
P++ TYN+ I+ A N D V K +M +G D + Y ++ + H
Sbjct: 496 IENGCTPNLVTYNIIIALQAKARNYDNVVKLYRDMQV-AGFRPDKITYSIVMEVLGHCGH 554
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDK 204
L AE + +E + + + Y L+ L+ GN DK
Sbjct: 555 LDEAE-AVFIEMRRDWAPDEPV-YGLLVDLWGKAGNVDK 591
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 53/281 (18%), Positives = 95/281 (33%), Gaps = 35/281 (12%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
TYT ++ + A+ L + + + YN ++ Y + + V E
Sbjct: 364 GHTYTTMIGILGQARQFGIMRNLLHEMNRDRCKPTVVTYNRIIHAYGRANYLREAVKVFE 423
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
E++ PD TY I A ++ M + G S D Y +VN
Sbjct: 424 EMEEAGYEPDRVTYCTLIDIHAKAGYLEVAMDLYGRMQ-EVGLSPDTFTYSAMVNCLGKG 482
Query: 164 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 223
L A E T +TY+ +I L A N D + ++++ +++ +
Sbjct: 483 GQLAAAYKLFCEMIENGCTP-NLVTYNIIIALQAKARNYDNVVKLYRDMQVAGFRPDKIT 541
Query: 224 YICILSSYLMLGHLKEV------------------GEIIDQWKQSATSD----------- 254
Y ++ GHL E G ++D W ++ D
Sbjct: 542 YSIVMEVLGHCGHLDEAEAVFIEMRRDWAPDEPVYGLLVDLWGKAGNVDKALGWYHAMLQ 601
Query: 255 ----FDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 291
++ CN LL AF + + A +L + P+
Sbjct: 602 DGLQPNVPTCNSLLSAFLKINRFQDAYSVLQNMLAQGLVPS 642
>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 906
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 108/259 (41%), Gaps = 14/259 (5%)
Query: 21 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 80
+ + FG+ R F+ P YT L+ + A + LF ++++ N
Sbjct: 184 LKEAFGVIEMMRKFKFRP----AFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVH 239
Query: 81 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
++ ++ ++ G+++ +++E+K + D+ YN+ I +D KF EM
Sbjct: 240 LFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEM 299
Query: 141 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 200
DD V Y L+ + A L E+ L E E + + Y + ++ G G
Sbjct: 300 KAQGLVPDD-VTYTTLIGVLCKARRL--DEAVELFE-ELDLNRSVPCVYAYNTMI-MGYG 354
Query: 201 NKDKIDQIWKSLRMTKQKMTSRN---YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDI 257
+ K D+ + L K+K + Y CIL+ G ++E I D+ +Q A ++
Sbjct: 355 SAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDAAP--NL 412
Query: 258 SACNRLLGAFSDVGLTEKA 276
+ N L+ G E A
Sbjct: 413 TTYNILIDMLCKAGELEAA 431
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/281 (20%), Positives = 112/281 (39%), Gaps = 10/281 (3%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVK 71
Y ID KV + ++F + + TYT L+ + A+ ++A ELFE +
Sbjct: 276 YNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELD 335
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
+ YN M+ Y S G+ ++ ++E KRK +P + YN ++ ++
Sbjct: 336 LNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVE 395
Query: 132 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 191
+ + DEM D+ + + Y L+++ A L A E + +T +
Sbjct: 396 EALRIHDEMRQDA--APNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFP-NIMTVNI 452
Query: 192 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 251
+I D+ I+ L SR + ++ LG V + +++
Sbjct: 453 MIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDG---LGRRGRVDDAYSLYEKML 509
Query: 252 TSD--FDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
SD ++ L+ F G E ++ + ++ + C+P
Sbjct: 510 DSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSP 550
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 58/124 (46%), Gaps = 2/124 (1%)
Query: 18 IDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNL 75
+D + K + G FE + + +Y+ L+H A ++ + +LF +K+ L
Sbjct: 559 MDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGL 618
Query: 76 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKK 135
+ L YN ++ + G+V+K ++EE+K K + P + TY + A +D+
Sbjct: 619 HLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYM 678
Query: 136 FLDE 139
+E
Sbjct: 679 LFEE 682
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 88/211 (41%), Gaps = 8/211 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
YT+L+ + E ++++ + S + ++ N M G+VEK + EEI
Sbjct: 519 VYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEI 578
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K + +VPD+ +Y++ I + K EM + G D + Y +++ + +
Sbjct: 579 KAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMK-EQGLHLDVLAYNTVIDGFCKSGK 637
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN-- 223
V+ L E + Q +TY ++ GL D++D+ + K N
Sbjct: 638 -VDKAYQLLEEMKTKGLQPTVVTYGSVV---DGLAKIDRLDEAYMLFEEAKSIGVDLNVV 693
Query: 224 -YICILSSYLMLGHLKEVGEIIDQWKQSATS 253
Y ++ + +G + E I+++ Q +
Sbjct: 694 IYSSLIDGFGKVGRIDEAYLILEELMQKGLT 724
Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 51/98 (52%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 102
T TY +++ A ++A LFE K + N ++Y+ ++ + VG++++ L++
Sbjct: 656 TVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLIL 715
Query: 103 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
EE+ +K + P+ +T+N + + ID+ + M
Sbjct: 716 EELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNM 753
Score = 43.9 bits (102), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 70/158 (44%), Gaps = 3/158 (1%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYT--ALLHLYAGAKWTEKAEELFERVK 71
Y++ ID KV I E L T +YT LL A+ ++A+ F+ +K
Sbjct: 695 YSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMK 754
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
S NA+ Y+ M+ + + K + +E++++ + P+ TY I+ A N+
Sbjct: 755 NLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVM 814
Query: 132 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 169
+ + D SGG D Y ++ +A+ ++A
Sbjct: 815 EARGLFDRFKA-SGGVPDSACYNAMIEGLSSANKAMDA 851
>gi|357485117|ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514181|gb|AES95804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 892
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 98/212 (46%), Gaps = 11/212 (5%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y+ L+ +A +EKA LF ++ + ++FN Y ++ L++S +++ + + +K
Sbjct: 528 YSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMK 587
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
V PD Y ++ T + + + DEMS G S + V Y +N Y+ +
Sbjct: 588 ESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMS-REGCSPNVVTYTCFINEYLKLNK- 645
Query: 167 VNAESSTLVE--AEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN- 223
N ++ L E E+ + Q I Y LI + G ++ + ++ M ++ + N
Sbjct: 646 -NNQAHKLYEKMKERGVYPDQ-ILYTMLIAAFCNTGEMNRAEALFDE--MKQEGRCTPNV 701
Query: 224 --YICILSSYLMLGHLKEVGEIIDQWKQSATS 253
Y C+++SY+ L + ++ ++ + S
Sbjct: 702 VMYTCLINSYIKLNKRDQAEKLYEEMRAKGLS 733
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+Y+ L+ + ++A E+F+ ++ S + N Y+ ++ + G+V+K V EE+
Sbjct: 317 SYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEM 376
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K ++PD+++Y++ I ++D KF +EM+ + S Y +L+ Y +
Sbjct: 377 KNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMT-SNNFSPSAFNYCSLIKGYYKSKQ 435
Query: 166 LVNA 169
NA
Sbjct: 436 FANA 439
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/169 (20%), Positives = 80/169 (47%), Gaps = 1/169 (0%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
+TYT L++L+ + A LF+ +K+S + + + Y ++ + + G++ + + +E
Sbjct: 561 KTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDE 620
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+ R+ P++ TY +I+ +Q K ++M + G D + Y L+ +
Sbjct: 621 MSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMK-ERGVYPDQILYTMLIAAFCNTG 679
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 213
+ AE+ ++ + Y LI Y L +D+ +++++ +R
Sbjct: 680 EMNRAEALFDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYEEMR 728
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 98/242 (40%), Gaps = 4/242 (1%)
Query: 50 LLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKN 109
+L +Y KA L E+ +++ + FN YNE + EK ++ + ++N
Sbjct: 461 ILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRN 520
Query: 110 VVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 169
V+PD+ Y+ IS A LN ++ +M+ G + + Y L+N++I+ + A
Sbjct: 521 VLPDVVNYSTLISCFAKRLNSEKAVMLFIKMT-KVGITFNVKTYTILINLFISDCKMDVA 579
Query: 170 ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILS 229
E + Q I Y L+ + G + ++ + Y C ++
Sbjct: 580 YRLFKGMKESRVYPDQ-IAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFIN 638
Query: 230 SYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE-FHMLLLQKNC 288
YL L + ++ ++ K+ D L+ AF + G +A F + + C
Sbjct: 639 EYLKLNKNNQAHKLYEKMKERGVYP-DQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRC 697
Query: 289 AP 290
P
Sbjct: 698 TP 699
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 78/182 (42%), Gaps = 12/182 (6%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVK 71
Y I+L + R F+G+ S + YT+L+ + +A LF+ +
Sbjct: 563 YTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMS 622
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
+ S N + Y + Y+ + + + + E++K + V PD Y + I++ T ++
Sbjct: 623 REGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMN 682
Query: 132 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES----------STLVEAEKSI 181
+ + DEM + + + V Y L+N YI + AE S L +E S+
Sbjct: 683 RAEALFDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYEEMRAKGLSRLCSSEGSV 742
Query: 182 TQ 183
++
Sbjct: 743 SE 744
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/115 (20%), Positives = 60/115 (52%), Gaps = 1/115 (0%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
+ + A+++ ++A E+F+ +K S + + Y+ ++ + G+V++ + V +
Sbjct: 280 NHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFK 339
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 158
E++ ++P+I++Y++ I +D+ + +EM +SG D Y L++
Sbjct: 340 EMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMK-NSGILPDVYSYSILID 393
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 43/218 (19%), Positives = 86/218 (39%), Gaps = 20/218 (9%)
Query: 56 GAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIF 115
G W L + + + N N +N ++ G +++ + V +E+K ++PD++
Sbjct: 262 GVAW-----RLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDVY 316
Query: 116 TYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLV 175
+Y++ I +DQ + EM +SG + Y L++ + V+
Sbjct: 317 SYSILIDGFCRKGRVDQASEVFKEMR-NSGILPNIYSYSILIDGFCKEGR-VDKALEVFE 374
Query: 176 EAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYL--- 232
E + S +Y LI + G+ D + W+ + ++ NY ++ Y
Sbjct: 375 EMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSK 434
Query: 233 -MLGHLKE--VGEIIDQWKQSATSDFDISACNRLLGAF 267
LKE + + + W D ACN +L +
Sbjct: 435 QFANALKEFRIMQKLGMWP-------DTIACNHILSIY 465
>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
Length = 855
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 104/246 (42%), Gaps = 5/246 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+YT ++ A +K ++A ELFE++K + S N + Y ++ + G++E E++
Sbjct: 365 SYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDM 424
Query: 106 KRKNVVPDIFTYNLWISS-CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+ VP TY + I C A + D K F E G D + Y L++ + AS
Sbjct: 425 SGSSCVPTRTTYTVVIDGLCKAQMLPDACKVF--EQMVQKGCVPDTITYTTLIDGFSKAS 482
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
+ A V K + +TY ++ + L ++ ++ +R + +
Sbjct: 483 KMDEARKLLDVMLTKG-PEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIF 541
Query: 225 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 284
+LS YL G +E +++ + + D+ L+ G +A ++
Sbjct: 542 TSLLSYYLSKGRAEEAYQVLTEMTARGCAP-DVILYTSLIDLLFSTGRVPEARHVFDSMI 600
Query: 285 QKNCAP 290
+K CAP
Sbjct: 601 EKGCAP 606
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 102/255 (40%), Gaps = 16/255 (6%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
YT+L+ L +A +F+ + + + +AL Y ++ + +G VE ++E +
Sbjct: 576 YTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMA 635
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
+ V PD F YN + +DQ D M SG + V + L++
Sbjct: 636 KSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVA-SGIKPNAVTFNVLMHGLFKDGKT 694
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 226
A S EK ++Y LI GLG ++ + + Q+M R I
Sbjct: 695 DRAFSLFKEMLEKDEVPPTLVSYTILI---DGLGKAGRVSEAFSQF----QEMIDRGIIP 747
Query: 227 ILSSYLML-------GHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 279
+Y L G + E ++++ + + D+ A + L+ D + + A +
Sbjct: 748 ECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNP-DVQAYSALITGLIDSSMVDTAWDV 806
Query: 280 HMLLLQKNCAPTNAS 294
++++ CAP +
Sbjct: 807 FQEMMKRGCAPNEVT 821
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/168 (19%), Positives = 74/168 (44%), Gaps = 5/168 (2%)
Query: 42 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 101
T+ TY +++H + +A+E+ ++++ ++ +++ Y+S G+ E+ V
Sbjct: 501 PTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQV 560
Query: 102 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 161
+ E+ + PD+ Y I +T + + + D M + G + D + Y ++ +
Sbjct: 561 LTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSM-IEKGCAPDALTYGTIIQNFS 619
Query: 162 TASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIW 209
+ V A L KS Y+ L+ Y L +++DQ +
Sbjct: 620 KIGN-VEAAGEILELMAKSGVGPDCFAYNSLMDGYVKL---ERVDQAF 663
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 45/230 (19%), Positives = 96/230 (41%), Gaps = 4/230 (1%)
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
E+A + + + + L + + N ++ +++K + E+ P I +YN
Sbjct: 2 EEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTV 61
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
IS A+ +D+ KF + M D+G D + + L++ + A L +A K
Sbjct: 62 ISGLASIDKMDEAYKFFNSM-IDNGCEPDVIAFTTLIHGFCKAGQ-PQVGHMLLNQALKR 119
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 240
++ Y +I Y G+ D +I + + + Y ++ LG + E
Sbjct: 120 FRPDVFL-YTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEA 178
Query: 241 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
E+ ++ ++S D L+ A S+ G ++A E + ++++ P
Sbjct: 179 YELFERMRKSGCLG-DYVTFMTLIEALSNHGKLDEACELYREMIERGYEP 227
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/254 (20%), Positives = 102/254 (40%), Gaps = 7/254 (2%)
Query: 29 SGERYFEGLPLS---AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEM 85
S R+F+ + LS A TY L+ G ++A + ++ + N + YN +
Sbjct: 173 SARRFFDSM-LSDGVAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTL 231
Query: 86 MTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSG 145
+ + G+V+ +V ++ + P++ T+N ++ ++ +K DEM G
Sbjct: 232 VAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEM-VREG 290
Query: 146 GSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKI 205
+ D V Y LV Y A + S E + +T+ LI + GN ++
Sbjct: 291 LAPDGVSYNTLVGGYCKAG-CSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERA 349
Query: 206 DQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLG 265
+ + +R +M + ++ + G L + + KQ + N L+
Sbjct: 350 VTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKP-SVVCYNALIN 408
Query: 266 AFSDVGLTEKANEF 279
+ VG ++A E
Sbjct: 409 GYCMVGRMDEAREL 422
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 71/157 (45%), Gaps = 10/157 (6%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+T+L+H+ A E+A L ++++ L N + + ++ + G ++ L V +
Sbjct: 332 TFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGM 391
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K+ + P + YN I+ +D+ ++ L EM G D V Y +++ Y
Sbjct: 392 KQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEA-KGLKPDVVTYSTIISAYCK--- 447
Query: 166 LVNAESSTLVEAEKSITQR----QWITYDFLIILYAG 198
N ++ + E + + ++ ITY LI + G
Sbjct: 448 --NCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCG 482
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 63/303 (20%), Positives = 119/303 (39%), Gaps = 61/303 (20%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+TAL+ + + + A +KQ + + + YN ++ Y VG++++ ++ E+
Sbjct: 367 TFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEM 426
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKF-LDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+ K + PD+ TY+ IS A N D F L++ + G D + Y +L+ +
Sbjct: 427 EAKGLKPDVVTYSTIIS--AYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEK 484
Query: 165 HLVNAES-----------------STLVEAE-----------------KSITQRQWITYD 190
L +A ++L++ K+ +TY
Sbjct: 485 RLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYS 544
Query: 191 FLI--------------ILYAGLGNKDKI--DQIWKSLRMTKQKMTSRNYICILSSYLML 234
LI +L+ L ++D I + + +L +K ++ + +L + M
Sbjct: 545 VLINGLSKSARAMEAQQLLFK-LYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMK 603
Query: 235 GHLKEVGEIIDQWKQSATS---DFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 291
G + E D+ QS + D S + L+ G KA FH +LQ AP
Sbjct: 604 GLMNEA----DKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPN 659
Query: 292 NAS 294
+ S
Sbjct: 660 STS 662
>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Glycine max]
Length = 1113
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 107/248 (43%), Gaps = 9/248 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT L+ A +KA+EL+ +++ S+ + + Y +M+ + + G +E V E+
Sbjct: 299 TYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEM 358
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ PD+ TY + + + + +DQ LD M G + Y L++ +
Sbjct: 359 EADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRV-RGIVPNLHTYNTLISGLLNLRR 417
Query: 166 LVNAESSTLVEAEKSI-TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
L E+ L +S+ +Y I Y LG+ +K ++ +M K+ +
Sbjct: 418 L--DEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFE--KMKKRGIMPSIA 473
Query: 225 ICILSSYLM--LGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 282
C S Y + +G ++E +I + S D N ++ +S G +KA +
Sbjct: 474 ACNASLYSLAEMGRIREAKDIFNDIHNCGLSP-DSVTYNMMMKCYSKAGQIDKATKLLTE 532
Query: 283 LLQKNCAP 290
+L + C P
Sbjct: 533 MLSEGCEP 540
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 87/213 (40%), Gaps = 4/213 (1%)
Query: 2 VTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLP--LSAKTSETYTALLHLYAGAKW 59
+ +F + Y I + K + FE +P Y L++ + A
Sbjct: 884 IISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGN 943
Query: 60 TEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNL 119
A +LF+R+ + + + Y ++ G+V+ EE+K + PD +YNL
Sbjct: 944 VNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNL 1003
Query: 120 WISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK 179
I+ + +++ EM + G S + Y L+ ++ + +V+ E +
Sbjct: 1004 MINGLGKSRRLEEALSLFSEMK-NRGISPELYTYNALI-LHFGNAGMVDQAGKMFEELQF 1061
Query: 180 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 212
+ TY+ LI ++ GNKD+ ++K +
Sbjct: 1062 MGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKM 1094
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/173 (20%), Positives = 76/173 (43%), Gaps = 2/173 (1%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
+ T TY L+ A +E+A ++FE + N +YN ++ + G V
Sbjct: 890 SPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACD 949
Query: 101 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
+ + + ++ + PD+ +Y + + T +D + +E+ +G D V Y ++N
Sbjct: 950 LFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKL-TGLDPDTVSYNLMIN-G 1007
Query: 161 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 213
+ S + S E + + TY+ LI+ + G D+ ++++ L+
Sbjct: 1008 LGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQ 1060
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 90/217 (41%), Gaps = 11/217 (5%)
Query: 35 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 94
EGL S KT Y+AL+ + T +L E ++ L N Y + + G+
Sbjct: 221 EGLKPSMKT---YSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGR 277
Query: 95 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 154
++ +++ ++ + PD+ TY + I + A +D+ K+ +M S D V Y+
Sbjct: 278 IDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASS-HKPDLVTYI 336
Query: 155 NLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM 214
L++ + L + E E +TY IL L K+DQ + L +
Sbjct: 337 TLMSKFGNYGDLETVK-RFWSEMEADGYAPDVVTY---TILVEALCKSGKVDQAFDMLDV 392
Query: 215 TKQKMTSRN---YICILSSYLMLGHLKEVGEIIDQWK 248
+ + N Y ++S L L L E E+ + +
Sbjct: 393 MRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNME 429
Score = 40.8 bits (94), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 71/166 (42%), Gaps = 7/166 (4%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
A T+ +Y + Y EKA + FE++K+ + + N + +G++ +
Sbjct: 434 APTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKD 493
Query: 101 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
+ +I + PD TYN+ + + ID+ K L EM G D + +L++
Sbjct: 494 IFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEM-LSEGCEPDIIVVNSLIDTL 552
Query: 161 ITASHLVNAESSTLVEAEKSIT-QRQWITYDFLIILYAGLGNKDKI 205
A + E+ + K + +TY+ LI GLG + K+
Sbjct: 553 YKAGRV--DEAWQMFGRLKDLKLAPTVVTYNILI---TGLGKEGKL 593
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 52/120 (43%), Gaps = 13/120 (10%)
Query: 13 DYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQ 72
D D TK G H T E+Y L+ G TE A +LF +K
Sbjct: 770 DAKKLFDKFTKSLGTHP-------------TPESYNCLMDGLLGCNITEAALKLFVEMKN 816
Query: 73 SNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQ 132
+ N YN ++ + +++++ + E+ + P+I T+N+ IS+ + +I++
Sbjct: 817 AGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINK 876
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 37/199 (18%), Positives = 76/199 (38%), Gaps = 2/199 (1%)
Query: 42 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 101
+ TY + + +A +++Q+ NA YN ++ + G ++ V
Sbjct: 155 RNPNTYLTIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKV 214
Query: 102 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 161
+ + + + P + TY+ + + + + L+EM G + Y + +
Sbjct: 215 YKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEME-TLGLRPNIYTYTICIRVLG 273
Query: 162 TASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 221
A + +A L E +TY LI G DK +++ +R + K
Sbjct: 274 RAGRIDDA-YGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDL 332
Query: 222 RNYICILSSYLMLGHLKEV 240
YI ++S + G L+ V
Sbjct: 333 VTYITLMSKFGNYGDLETV 351
>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
Length = 790
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 85/202 (42%), Gaps = 4/202 (1%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSET--YTALLHLYAGAK 58
++ + V Y ID + K + R F+ L ++ Y+ L+ Y
Sbjct: 352 LMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVG 411
Query: 59 WTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYN 118
++A LFE++ N S NA +N ++ S G +++ + +++ + + P ++T+N
Sbjct: 412 KVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFN 471
Query: 119 LWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAE 178
+ I + D K L +M SG Y + +Y +A + AE + E
Sbjct: 472 ILIGRMLKQGDFDDAHKCLQKMM-SSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKE 530
Query: 179 KSITQRQWITYDFLIILYAGLG 200
+ + + TY LI Y LG
Sbjct: 531 EGVPPDDF-TYTSLIKAYGKLG 551
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 91/220 (41%), Gaps = 5/220 (2%)
Query: 27 IHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMM 86
+ S R FE +P + +Y L+H A ++A LF R+K N Y ++
Sbjct: 243 VDSAFRVFEEMP--NRNEVSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALI 300
Query: 87 TLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGG 146
+ V K +++E+ +N+VPD+ TYN I+ ++D + L M + G
Sbjct: 301 K-GLCRKNVHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMK-ERGL 358
Query: 147 SDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKID 206
D Y ++ ++ + A E+ ++ I Y LI Y +G D+
Sbjct: 359 VPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSA-NVIMYSVLIDGYCKVGKVDEAG 417
Query: 207 QIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 246
+++ + + + ++ G+LKE + DQ
Sbjct: 418 CLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQ 457
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 55/277 (19%), Positives = 112/277 (40%), Gaps = 35/277 (12%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
+ Y LL L A ++ +L+ + + +S + +N M+ +Y +G V++ + +
Sbjct: 158 KCYNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQFMCK 217
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS--------------CDSGGSDDW 150
+ + + PD FT +I + ++D + +EM C++G D+
Sbjct: 218 MIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNRNEVSYNQLIHGLCEAGRIDEA 277
Query: 151 VK-YVNL------VNIYITASHL-------VNAESSTLVEAEKSITQRQWITYDFLIILY 196
V +V + N+Y + + V+ L E + ITY+ LI
Sbjct: 278 VSLFVRMKDDCCYPNVYTYTALIKGLCRKNVHKAMGLLDEMLERNLVPDLITYNSLI--- 334
Query: 197 AGLGNKDKIDQIWKSLRMTKQK---MTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATS 253
AG +D ++ L + K++ R Y C + ++E + D + S
Sbjct: 335 AGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVS 394
Query: 254 DFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
++ + L+ + VG ++A +L KNC+P
Sbjct: 395 A-NVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSP 430
>gi|356540361|ref|XP_003538658.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Glycine max]
Length = 523
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 71/167 (42%), Gaps = 2/167 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
Y LL ++A+ +F + + +A Y+ + Y V+ V++++
Sbjct: 253 AYNNLLQALCKGGCVDEAKTIFHDMLSKRVEPDAFTYSIFIHSYCDADDVQSALRVLDKM 312
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+R N++P++FTYN I ++++ LDEM D W N + Y
Sbjct: 313 RRYNILPNVFTYNCIIKRLCKNEHVEEAYLLLDEMISRGVRPDTWS--YNAIQAYHCDHC 370
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 212
VN + EK TY+ ++ L +G DK+ ++W ++
Sbjct: 371 EVNRAIRLMFRMEKDNCLPDRHTYNMVLKLLIRIGRFDKVTKVWGNM 417
>gi|302771417|ref|XP_002969127.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
gi|300163632|gb|EFJ30243.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
Length = 646
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 102/249 (40%), Gaps = 44/249 (17%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY ALL +Y ++A EL ++ + +S N + YNE++ Y G ++ A + + +
Sbjct: 182 TYNALLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSL 241
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K + PD FTY IS A ++ +K L+
Sbjct: 242 LSKGLCPDEFTYCTLIS---AFNRAERYEKALE--------------------------- 271
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
T E K+ +TY+ LI +Y G +K+D + K + ++K + + +
Sbjct: 272 -------TFTEMRKTNCTPNIVTYNILIDIY---GRMEKLDDMMKVFKFMQEKNCTPDLV 321
Query: 226 ---CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 282
+L S+ G L EV + + K++ + N L+ + G + + + +
Sbjct: 322 TWNSLLKSFGNCGMLTEVSNVFREMKRAGYMP-GVDTFNILIECYGRCGYVDYSVDIYKG 380
Query: 283 LLQKNCAPT 291
LL+ PT
Sbjct: 381 LLRTGLQPT 389
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 49/96 (51%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
+ + A++ + A W E+A +L E ++++ L + + YN +M++Y G K V+ E
Sbjct: 497 KVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYHKAEEVMSE 556
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
++R P++ TYN + S +D + +M
Sbjct: 557 MRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDM 592
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 48/252 (19%), Positives = 109/252 (43%), Gaps = 6/252 (2%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 102
T T+ AL+ A ++ E++ + + ++ L + + ++ Y + GQ ++ +
Sbjct: 389 TVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQLSDACHAGLIHSYANSGQFFQLRKYI 448
Query: 103 EEIKR--KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
+E+++ K + I ++ C ++ ++ + L+++ D+G S D +K N +
Sbjct: 449 DELEKSAKQPLSGILCKTFVLAYCKCCMD-NEAQLALNQLY-DNGHSPD-IKVFNAMISM 505
Query: 161 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 220
+ L E K+ + +TY+ L+ +Y G K +++ +R +
Sbjct: 506 CAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYHKAEEVMSEMRRAGKAPN 565
Query: 221 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 280
Y +L SY G + + + +A D N L+G++S +GL ++A
Sbjct: 566 LITYNTLLYSYTKHGRMDDAARVFGDM-VAARVRPDNFTFNTLVGSYSSLGLYKEALSVI 624
Query: 281 MLLLQKNCAPTN 292
+ + C PT
Sbjct: 625 EYMTEHGCQPTQ 636
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 89/211 (42%), Gaps = 6/211 (2%)
Query: 36 GLPLSAKTSETYTALLHLYAGA-KWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 94
GL LS + L+H YA + ++ + + + E K + + ++ + Y
Sbjct: 420 GLQLS---DACHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTFVLAYCKCCM 476
Query: 95 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 154
+ L + ++ PDI +N IS CA I++ K L+E+ + D V Y
Sbjct: 477 DNEAQLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIR-KAQLKPDGVTYN 535
Query: 155 NLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM 214
L+++Y AE + E ++ ITY+ L+ Y G D +++ +
Sbjct: 536 CLMSMYGREGMYHKAE-EVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVA 594
Query: 215 TKQKMTSRNYICILSSYLMLGHLKEVGEIID 245
+ + + + ++ SY LG KE +I+
Sbjct: 595 ARVRPDNFTFNTLVGSYSSLGLYKEALSVIE 625
>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
Length = 649
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 110/236 (46%), Gaps = 37/236 (15%)
Query: 46 TYTALLHLYAGAKWTEKAEELF-----ERVKQSNLSFNALM------------------- 81
T+T L+H Y EKA +LF +R++ +++N+L+
Sbjct: 404 TFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDM 463
Query: 82 -----------YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 130
Y+ ++ + GQVE+ ++E+ K +P+I TYN I + N+
Sbjct: 464 HAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNV 523
Query: 131 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 190
+ ++FL +M D+ D + + L++ YI ++ A + + EK + Q +TY+
Sbjct: 524 KKGQQFLQKMMQDN-ILPDLITFNTLIHGYIKEENMHGAFNVFNI-MEKEMVQPDAVTYN 581
Query: 191 FLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 246
+I ++ GN ++ +++K + + + Y+ +++ ++ G+ KE ++ D+
Sbjct: 582 MIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDE 637
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 90/205 (43%), Gaps = 2/205 (0%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
A ++ L+ + E+A + ++ ++Q ++ + + ++ ++ L+ + G+++ A
Sbjct: 259 APDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAA 318
Query: 101 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
+ E+K +VPD Y + I ++ + + DEM G D V Y L+N
Sbjct: 319 YLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEM-VGLGCLPDVVTYNTLLNGL 377
Query: 161 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 220
L++AE E+ +T T+ LI Y GN +K Q++ +L + +
Sbjct: 378 CKQHRLLDAEELLNEMKERGVTP-DLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPD 436
Query: 221 SRNYICILSSYLMLGHLKEVGEIID 245
Y ++ G L + E+ D
Sbjct: 437 VVAYNSLIDGMCRKGDLAKANELWD 461
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 43/247 (17%), Positives = 100/247 (40%), Gaps = 7/247 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+++ L+ L++ + A +K L + ++Y ++ + G + + V +E+
Sbjct: 299 SFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEM 358
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+PD+ TYN ++ + ++ L+EM + G + D + L++ Y +
Sbjct: 359 VGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMK-ERGVTPDLCTFTTLIHGYCRDGN 417
Query: 166 LVNAES--STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 223
A TL+ + + Y+ LI G+ K +++W + +
Sbjct: 418 FEKALQLFDTLLHQR---LRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVT 474
Query: 224 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 283
Y ++ S+ G ++E +D+ +I N ++ + G +K +F +
Sbjct: 475 YSILIDSHCEKGQVEEAFGFLDEMVSKGNLP-NIMTYNSIIKGYCRSGNVKKGQQFLQKM 533
Query: 284 LQKNCAP 290
+Q N P
Sbjct: 534 MQDNILP 540
Score = 44.3 bits (103), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 42/85 (49%)
Query: 57 AKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFT 116
A W AEE + V S+ NA N M+ Y + +K V+ E++++ V PD+ T
Sbjct: 135 AGWPHLAEEAYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVT 194
Query: 117 YNLWISSCAATLNIDQVKKFLDEMS 141
+N+ I + ++D +D M+
Sbjct: 195 HNVLIDARFRAGDVDAAIALVDSMA 219
>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
Length = 977
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 118/307 (38%), Gaps = 46/307 (14%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSET--YTALLHLYAGAKWTEKAEELFERVK 71
Y T ID +K+ + F+ + + TS Y LL + + EKA+EL + +
Sbjct: 633 YGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMS 692
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCA------ 125
NA+ Y ++ Y G + + + +E+K K +VPD F Y + C
Sbjct: 693 GKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVE 752
Query: 126 --------------------------------ATLNIDQVKKFLDEMSCDSGGSDDWVKY 153
L D + + +D S D G + V Y
Sbjct: 753 RAITIFETNEKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDG-SFDKFGKPNDVTY 811
Query: 154 VNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 213
N++ Y+ + A +K+ ITY L+ Y +G + ++ ++ +
Sbjct: 812 -NIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVI 870
Query: 214 MTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ-WKQSATSD---FDISACNRLLGAFSD 269
+ + Y I++++L G + ++DQ + ++A D IS C LL F+
Sbjct: 871 AAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAK 930
Query: 270 VGLTEKA 276
VG E A
Sbjct: 931 VGEMEVA 937
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 62/126 (49%), Gaps = 1/126 (0%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
++TYT L++ AEE+F ++ ++ + Y ++ + +G ++K + + +
Sbjct: 595 AKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFD 654
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
E+ + + ++ YN+ + + I++ K+ LDEMS G + V Y +++ Y +
Sbjct: 655 EMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMS-GKGFPPNAVTYCTIIDGYCKS 713
Query: 164 SHLVNA 169
L A
Sbjct: 714 GDLAEA 719
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/232 (19%), Positives = 100/232 (43%), Gaps = 17/232 (7%)
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
+ A + + + S N ++Y ++ ++ + V++E++ + + PD F YN
Sbjct: 437 DGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSL 496
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
I + +D+ + FL EM ++G D Y ++ YI A +A+ E
Sbjct: 497 IIGLSKAKKMDEARSFLLEM-VENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECG 555
Query: 181 ITQRQWITYDFLIILYAGLGN----KDKIDQIWKSLR-MTKQKM--TSRNYICILSSYLM 233
+ + +L GL N K K+ + + R M +Q + ++ Y +++ +
Sbjct: 556 VIPNK--------VLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVK 607
Query: 234 LGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 285
G + + EI + + + D+ + L+ FS +G +KA+ ++Q
Sbjct: 608 NGKVNDAEEIFHEMRGKGIAP-DVFSYGTLIDGFSKLGNMQKASSIFDEMVQ 658
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 95/233 (40%), Gaps = 3/233 (1%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
YT L+ + A + + +++ ++ + YN ++ ++++ + E+
Sbjct: 458 YTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMV 517
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
PD FTY +IS K++ EM + G + V L+N Y +
Sbjct: 518 ENGFKPDAFTYGAFISGYIEAGEFASADKYVKEM-LECGVIPNKVLCTGLINEYCKKGKV 576
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 226
+ A S+ E+ I TY L+ G + ++I+ +R +Y
Sbjct: 577 IEACSAFRSMVEQGILGDAK-TYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGT 635
Query: 227 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 279
++ + LG++++ I D+ Q+ + ++ N LLG F G EKA E
Sbjct: 636 LIDGFSKLGNMQKASSIFDEMVQAGLTS-NVIIYNMLLGGFCRSGEIEKAKEL 687
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 56/113 (49%), Gaps = 1/113 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+Y L+ ++ +KA +F+ + Q+ L+ N ++YN ++ + G++EK +++E+
Sbjct: 632 SYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEM 691
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 158
K P+ TY I + ++ + + DEM D +V Y LV+
Sbjct: 692 SGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFV-YTTLVD 743
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 65/147 (44%), Gaps = 5/147 (3%)
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
EKA+ LF+ + ++ A Y ++ + V K ++ EIK++N+V +TY
Sbjct: 367 EKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTA 426
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
+ ++ ++D + EM SG + V Y L+ ++ S +A L E +
Sbjct: 427 VKGMCSSGDLDGAYNIVKEMGA-SGCRPNVVIYTTLIKTFLQKSRFGDA-VRVLKEMREQ 484
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQ 207
Y+ LII GL K+D+
Sbjct: 485 GIAPDTFCYNSLII---GLSKAKKMDE 508
>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Glycine max]
Length = 583
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/249 (20%), Positives = 97/249 (38%), Gaps = 38/249 (15%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+ AL++ + K ++A +LF+ + + +L NA+ +N M+ + G +E+ + +
Sbjct: 345 TFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSM 404
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ + P++ TYN I+ N+ KK L+EM
Sbjct: 405 LDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEM------------------------- 439
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
E + +TY+ LI + G K +++ + K Y
Sbjct: 440 ------------ENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYN 487
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 285
++ Y M G+LK ++ Q ++ ++ N L+ F G E AN +L+
Sbjct: 488 TLMDGYCMEGNLKAALKVRTQMEKEGKRA-NVVTYNVLIKGFCKTGKLEDANRLLNEMLE 546
Query: 286 KNCAPTNAS 294
K P +
Sbjct: 547 KGLNPNRTT 555
Score = 40.4 bits (93), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 48/234 (20%), Positives = 101/234 (43%), Gaps = 16/234 (6%)
Query: 64 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 123
+E+ +R Q NL+ +N + G++ K V+E+IK P+I TYN I
Sbjct: 189 KEMIKRRIQPNLT----TFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDG 244
Query: 124 -C--AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
C + + + L EM + ++ + + L++ + +++ A+++ E ++
Sbjct: 245 HCKKGSAGKMYRADAILKEMLANKICPNE-ITFNTLIDGFCKDENVLAAKNA-FEEMQRQ 302
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQ---IWKSLRMTKQKMTSRNYICILSSYLMLGHL 237
+ +TY+ LI GL N K+D+ +W + K + +++ + +
Sbjct: 303 GLKPNIVTYNSLI---NGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMI 359
Query: 238 KEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 291
KE ++ D + I+ N ++ AF G+ E+ H +L + P
Sbjct: 360 KEARKLFDDIAEQDLVPNAITF-NTMIDAFCKAGMMEEGFALHNSMLDEGIFPN 412
>gi|255565671|ref|XP_002523825.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536913|gb|EEF38551.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 528
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 91/212 (42%), Gaps = 4/212 (1%)
Query: 27 IHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTE--KAEELFERVKQSNLSFNALMYNE 84
I ER F + ++ YT + + A + + +A ++F + N++ +N
Sbjct: 262 IPEAERVFTEMKVAGCMPNVYTYTIVIDALCRCGQITRAHDVFAEMLDVGCEPNSITFNN 321
Query: 85 MMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS 144
++ +++ G+ EKV V ++KR PD TYN I S N+D+ K L+ M
Sbjct: 322 LLRVHVKAGRTEKVLQVYNQMKRMGCPPDTVTYNFLIESHCKDGNLDEALKVLNSM-VKK 380
Query: 145 GGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDK 204
G S + + L I VN + ++ + +TY+ L+ ++ + D
Sbjct: 381 GCSPNASTFNGLFG-SIAKLRDVNGAHRLYAKMKELKCKANTVTYNILMRMFVDTKSTDM 439
Query: 205 IDQIWKSLRMTKQKMTSRNYICILSSYLMLGH 236
+ ++ K + + Y +++ Y +GH
Sbjct: 440 VLKLKKEMDEDDVEPNVNTYCVLIAMYCGMGH 471
Score = 37.4 bits (85), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 49/284 (17%), Positives = 109/284 (38%), Gaps = 14/284 (4%)
Query: 20 LMTKVFGIHSGERYFEGL---------PLSAKTSETYTALLHLYAGAKWTEKAEELFERV 70
++ K + G +F+ L P E Y ++ L + + ++ + +
Sbjct: 109 VIEKCAAVRHGIPFFQALSFFNWATSRPGFTHHPEPYNEMIDLAGKVRNFDLGWQVIDLM 168
Query: 71 KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 130
K N+ + ++ ++ Y+ G + ++ N PD +++ IS
Sbjct: 169 KARNVEISIETFSILIRRYVRAGLASEAVHAFNRMEDYNCKPDKIAFSILISILCRKRRA 228
Query: 131 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 190
+ + F D + D + Y NLV + A ++ AE E + + TY
Sbjct: 229 TEAQSFFDSLK--DKFEPDVIVYTNLVRGWCRAGNIPEAE-RVFTEMKVAGCMPNVYTYT 285
Query: 191 FLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQS 250
+I G + ++ + + S + +L ++ G ++V ++ +Q K+
Sbjct: 286 IVIDALCRCGQITRAHDVFAEMLDVGCEPNSITFNNLLRVHVKAGRTEKVLQVYNQMKRM 345
Query: 251 ATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
D N L+ + G ++A + +++K C+P NAS
Sbjct: 346 GCPP-DTVTYNFLIESHCKDGNLDEALKVLNSMVKKGCSP-NAS 387
>gi|449477018|ref|XP_004154904.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Cucumis sativus]
Length = 567
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 104/236 (44%), Gaps = 3/236 (1%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 102
+ + +L +YA T+ A +F+ + + + N +++ + G+ K LV
Sbjct: 185 SPTVFDMILKVYAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKALLVY 244
Query: 103 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 162
E++ ++PDIF+Y + +++ +D+ F+ EM S + V Y +L++ Y++
Sbjct: 245 EQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEME-RSCCEPNVVTYNSLIDGYVS 303
Query: 163 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 222
+ A+ + +EK I + TY LI Y G ++ ++++ + +
Sbjct: 304 LGDVCGAKKVLALMSEKGIPENSR-TYTLLIKGYCKRGQMEQAEKLFGCMMEKNLFVDEH 362
Query: 223 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 278
Y ++ +Y G + + I D + + CN L+ + +G KA E
Sbjct: 363 VYGVLIHAYCTAGRVDDALRIRDAMLKVGLK-MNTVICNSLINGYCKLGHVNKAAE 417
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 72/166 (43%), Gaps = 2/166 (1%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
Y L+H Y A + A + + + + L N ++ N ++ Y +G V K A V+
Sbjct: 362 HVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVS 421
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+K N+ PD + YN + + + K DEM + G + V Y L+
Sbjct: 422 MKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMH-NKGVNFTVVTYNTLLKNLFHVG 480
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK 210
H+ +A + ++ + + +TY L+ + +G D+ IWK
Sbjct: 481 HVEHALHIWNLMHKRGVAPNE-VTYCTLLDAFFKVGTFDRAMMIWK 525
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 102/249 (40%), Gaps = 3/249 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+YT +++ Y ++A + +++S N + YN ++ Y+S+G V V+ +
Sbjct: 258 SYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALM 317
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K + + TY L I ++Q +K M + D+ V Y L++ Y TA
Sbjct: 318 SEKGIPENSRTYTLLIKGYCKRGQMEQAEKLFGCMMEKNLFVDEHV-YGVLIHAYCTAGR 376
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ +A + + I + LI Y LG+ +K ++ S++ K S Y
Sbjct: 377 VDDALRIRDAMLKVGLKMNTVIC-NSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYN 435
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 285
+L + + ++ D+ +F + N LL VG E A L+ +
Sbjct: 436 TLLDGFCKQEDFIKAFKLCDEMHNKGV-NFTVVTYNTLLKNLFHVGHVEHALHIWNLMHK 494
Query: 286 KNCAPTNAS 294
+ AP +
Sbjct: 495 RGVAPNEVT 503
>gi|413916119|gb|AFW56051.1| hypothetical protein ZEAMMB73_517553 [Zea mays]
Length = 663
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 88/197 (44%), Gaps = 8/197 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY +LL+ Y A ++A LF ++++ L+ L YN ++ Y +G +E+ + EE+
Sbjct: 374 TYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEM 433
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ +PD++TY + + ++ ++F DEM G D Y + IT
Sbjct: 434 VEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEM-LSKGLRPDCFAYNTRICAEITLGD 492
Query: 166 LVNA---ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 222
+ + ++E S T +TY+ LI GN +++ + +
Sbjct: 493 ISKSFQLREVIMLEGISSDT----VTYNILIDGLCKTGNLKDAEELMMQMISNGLQPDCI 548
Query: 223 NYICILSSYLMLGHLKE 239
Y C++ ++ G L+E
Sbjct: 549 TYTCLIHAHCERGFLRE 565
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/254 (19%), Positives = 105/254 (41%), Gaps = 11/254 (4%)
Query: 42 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 101
T TY A++H + E A+ F ++ L + + YN ++ Y G ++ L+
Sbjct: 335 PTVVTYNAMIHGLLQSGQIEAAQAKFVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLL 394
Query: 102 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 161
+++R + P + TYN+ I ++++ ++ +EM + G D Y I +
Sbjct: 395 FGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEM-VEQGCLPDVYTY----TILM 449
Query: 162 TASHLVNAESSTLVEAEKSIT---QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQK 218
SH V + + T ++ ++ + Y+ I LG+ K Q+ + + +
Sbjct: 450 KGSHNVCSLAMTREFFDEMLSKGLRPDCFAYNTRICAEITLGDISKSFQLREVIMLEGIS 509
Query: 219 MTSRNYICILSSYLMLGHLKEVGEIIDQW-KQSATSDFDISACNRLLGAFSDVGLTEKAN 277
+ Y ++ G+LK+ E++ Q D C L+ A + G +A
Sbjct: 510 SDTVTYNILIDGLCKTGNLKDAEELMMQMISNGLQPDCITYTC--LIHAHCERGFLREAR 567
Query: 278 EFHMLLLQKNCAPT 291
+F ++ P+
Sbjct: 568 KFFNDMISDGLPPS 581
Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 75/159 (47%), Gaps = 13/159 (8%)
Query: 78 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFL 137
++ YN ++T ++ G V+KV + E++ + ++P + TYN I + I+ +
Sbjct: 301 SSFTYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKF 360
Query: 138 DEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLV--EAEKSITQRQWITYDFLIIL 195
EM G D + Y +L+N Y A N + + L+ + ++ +TY+ LI
Sbjct: 361 VEMRA-MGLLPDVITYNSLLNGYCKAG---NQKEALLLFGDLRRAGLAPTVLTYNILIDG 416
Query: 196 YAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLML 234
Y LG+ ++ R K++M + + + +Y +L
Sbjct: 417 YCRLGDLEEA-------RRLKEEMVEQGCLPDVYTYTIL 448
>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
Length = 624
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/252 (19%), Positives = 106/252 (42%), Gaps = 6/252 (2%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 102
T TYT ++ A T+ A +L + ++ S N YN ++ ++++ ++
Sbjct: 79 TVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKML 138
Query: 103 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 162
EE+ + PD+ TYN +I +D+ +KFL M + D V Y ++N
Sbjct: 139 EEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPV----TPDVVSYTTVINGLCK 194
Query: 163 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 222
+ L ++ S L + +TY LI + G ++ + S+ +
Sbjct: 195 SGDL-DSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMV 253
Query: 223 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 282
Y +L + LGH+ + +++ + ++ + D+ + N + +KA
Sbjct: 254 AYNSLLGALHRLGHIGKAEDMLVEMERRGFTP-DVVSYNACIDGLCKAERVKKAKAVFDR 312
Query: 283 LLQKNCAPTNAS 294
++++ C P +S
Sbjct: 313 MVERGCTPNASS 324
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 100/250 (40%), Gaps = 16/250 (6%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+ LL + EKA +L R+K+ + +YN +++ Y + + E+
Sbjct: 12 TFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEM 71
Query: 106 KRKNVVPDIFTY-NLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+ + +P + TY N+ C A D V K LDEM D G S + Y N+ +
Sbjct: 72 VKNHCLPTVVTYTNIVDGLCKAGRTKDAV-KLLDEMR-DKGCSPNIYTY----NVIVEGL 125
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILY----AGLGNKDKIDQIWKSLRMTKQKMT 220
E L EA+K + + Y ++ Y GL D++D+ K L
Sbjct: 126 ----CEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVTPD 181
Query: 221 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 280
+Y +++ G L ++DQ + D+ + L+ F G E+A
Sbjct: 182 VVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTP-DVVTYSSLIDGFCKGGEVERAMGLL 240
Query: 281 MLLLQKNCAP 290
+L+ C P
Sbjct: 241 DSMLKLGCRP 250
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/249 (20%), Positives = 103/249 (41%), Gaps = 16/249 (6%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y AL+ Y+ AK +A + + +++ + Y ++ G+ + +++E++
Sbjct: 48 YNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMR 107
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
K P+I+TYN+ + +D+ KK L+EM+ G D V Y + +
Sbjct: 108 DKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAV-RGYFPDVVTYNSFIKGLCKCDR- 165
Query: 167 VNAESSTLVEAEKSITQRQWITYDFL--IILYAGLGNKDKIDQIWKSL-RMTKQKMTSR- 222
V+ + R +T D + + GL +D + L +MT + T
Sbjct: 166 --------VDEARKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDV 217
Query: 223 -NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 281
Y ++ + G ++ ++D + ++ A N LLGA +G KA + +
Sbjct: 218 VTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRP-NMVAYNSLLGALHRLGHIGKAEDMLV 276
Query: 282 LLLQKNCAP 290
+ ++ P
Sbjct: 277 EMERRGFTP 285
>gi|147821100|emb|CAN70963.1| hypothetical protein VITISV_038268 [Vitis vinifera]
Length = 844
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 122/299 (40%), Gaps = 18/299 (6%)
Query: 4 HKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSA-KTSET-YTALLHLYAGAKWTE 61
H+ F + Y I+ ++K E L S K E + ++ Y A +
Sbjct: 128 HRNFAHNYETYLAMIEKLSKARAFEPMETLISQLHKSQIKCGENLFITVIRNYGFAGRPK 187
Query: 62 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK-NVVPDIFTYNLW 120
A F R+ L + +N ++ + + + V L+ + ++K +VP++FT N+
Sbjct: 188 LAIRTFLRIPSFGLQPSVRSFNTLLNTLVQNKRFDLVHLMFKNCRKKFGIVPNVFTCNIL 247
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
+ + +ID + L+EM G + V Y ++ Y++ +V A V E
Sbjct: 248 VKALCKKNDIDAAIRVLEEMPA-MGFIPNVVTYTTILGGYVSKGDMVGARR---VFGE-- 301
Query: 181 ITQRQWI----TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGH 236
I R W+ TY L+ Y G ++ + + + Y I+ +Y
Sbjct: 302 ILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYC---K 358
Query: 237 LKEVGEIIDQWKQSATSDFDISA--CNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNA 293
K+ GE+++ + S+ C R++ + G E A E LL+KNC P NA
Sbjct: 359 EKKSGEVLNLLDDMLEKKYIPSSALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNA 417
>gi|125563762|gb|EAZ09142.1| hypothetical protein OsI_31412 [Oryza sativa Indica Group]
Length = 962
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 60/122 (49%), Gaps = 4/122 (3%)
Query: 36 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 95
G P+S E Y +L Y A E+ + ++++++ F+ YN M+ +Y G +
Sbjct: 816 GFPVSL---EAYNCMLDAYGKAGQLEEFAAVLQKMERAGCEFDHYTYNIMINIYGRKGWI 872
Query: 96 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 155
E VA V+ E+K + PD+++YN I + + K + EM G + D V Y N
Sbjct: 873 EGVANVLAELKSRGGEPDLYSYNTLIKAYGIAGMPEDAVKLMQEMRI-KGIAADRVTYTN 931
Query: 156 LV 157
L+
Sbjct: 932 LI 933
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 117/281 (41%), Gaps = 42/281 (14%)
Query: 32 RYFEGLPLSAKTS--ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLY 89
R + +P SA Y +++ +++ + AE L+ +K S+ + + Y+ ++ +Y
Sbjct: 597 RIYNQMPKSATHPNLRIYCSMIDVFSIMERFTDAEALYLELKASSCVLDMIAYSVIVRMY 656
Query: 90 MSVGQVEKVALVVEEI-KRKNVVPDIF--------------------------------- 115
G+ E LV+E++ K+K +VPD +
Sbjct: 657 TKAGRPEDACLVLEDMEKQKEIVPDKYLFLDMLRTYQKCGLLEKLSDTYYWILKSQVELD 716
Query: 116 --TYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESST 173
YN I+ C + +D++ + DEM G + V L++IY A AE
Sbjct: 717 EAMYNCIINCCGRAIPVDELSRIFDEM-IQQGHLANTVTLNVLLDIYGKAGLFNKAEKVF 775
Query: 174 LVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLM 233
L+ ++ + I+Y+ +I +A G+ + + ++ ++ Y C+L +Y
Sbjct: 776 LMARKQGMA--DIISYNTIIAAHAKNGDFRSMIYFVQRMQEAGFPVSLEAYNCMLDAYGK 833
Query: 234 LGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTE 274
G L+E ++ Q + A +FD N ++ + G E
Sbjct: 834 AGQLEEFAAVL-QKMERAGCEFDHYTYNIMINIYGRKGWIE 873
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Query: 68 ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAAT 127
+R++++ + YN M+ Y GQ+E+ A V+++++R D +TYN+ I+
Sbjct: 810 QRMQEAGFPVSLEAYNCMLDAYGKAGQLEEFAAVLQKMERAGCEFDHYTYNIMINIYGRK 869
Query: 128 LNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
I+ V L E+ GG D Y L+ Y A
Sbjct: 870 GWIEGVANVLAELK-SRGGEPDLYSYNTLIKAYGIAG 905
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 44/234 (18%), Positives = 100/234 (42%), Gaps = 8/234 (3%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
E + L+ Y E+AE + + + ++ N + YN ++T Y V ++K V +
Sbjct: 368 ENWLVRLNAYCQQGKMEEAELVLKSLVDEGIALNVVAYNTVITGYGKVSDMQKAMEVFDR 427
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+K + PD TY I Q + ++ +SG + + ++N+ A
Sbjct: 428 LKSAGLAPDETTYRSMIEGFGRADKYKQAILYYRKLR-NSGFKPNASNFYTMINLL--AR 484
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
H + ++ ++E ++ + L+ Y +G K+ QI K+ K + +
Sbjct: 485 HDDSEGATEILEDMRAAGCQCSSIVTVLVRAYGSVGRMHKVLQILKACFYKKILFDATSC 544
Query: 225 ICILSSYLMLGHLKEVGEIIDQ--WKQSATSDFDISACNRLLGAFSDVGLTEKA 276
+++ ++ ++E ++ + WK SDF+ + + L+ + + G + A
Sbjct: 545 SILVTGFVQNSLVEEAMRVLREKKWKD---SDFEDNLYHILICSCKEAGCCDDA 595
>gi|115479233|ref|NP_001063210.1| Os09g0423300 [Oryza sativa Japonica Group]
gi|50725891|dbj|BAD33419.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|50726131|dbj|BAD33652.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113631443|dbj|BAF25124.1| Os09g0423300 [Oryza sativa Japonica Group]
gi|125605742|gb|EAZ44778.1| hypothetical protein OsJ_29409 [Oryza sativa Japonica Group]
Length = 962
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 60/122 (49%), Gaps = 4/122 (3%)
Query: 36 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 95
G P+S E Y +L Y A E+ + ++++++ F+ YN M+ +Y G +
Sbjct: 816 GFPVSL---EAYNCMLDAYGKAGQLEEFAAVLQKMERAGCEFDHYTYNIMINIYGRKGWI 872
Query: 96 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 155
E VA V+ E+K + PD+++YN I + + K + EM G + D V Y N
Sbjct: 873 EGVANVLAELKSRGGEPDLYSYNTLIKAYGIAGMPEDAVKLMQEMRI-KGIAADRVTYTN 931
Query: 156 LV 157
L+
Sbjct: 932 LI 933
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 117/281 (41%), Gaps = 42/281 (14%)
Query: 32 RYFEGLPLSAKTS--ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLY 89
R + +P SA Y +++ +++ + AE L+ +K S+ + + Y+ ++ +Y
Sbjct: 597 RIYNQMPKSATHPNLRIYCSMIDVFSIMERFTDAEALYLELKASSCVLDMIAYSVIVRMY 656
Query: 90 MSVGQVEKVALVVEEI-KRKNVVPDIF--------------------------------- 115
G+ E LV+E++ K+K +VPD +
Sbjct: 657 TKAGRPEDACLVLEDMEKQKEIVPDKYLFLDMLRTYQKCGLLEKLSDTYYWILKSQVELD 716
Query: 116 --TYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESST 173
YN I+ C + +D++ + DEM G + V L++IY A AE
Sbjct: 717 EAMYNCIINCCGRAIPVDELSRIFDEM-IQQGHLANTVTLNVLLDIYGKAGLFNKAEKVF 775
Query: 174 LVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLM 233
L+ ++ + I+Y+ +I +A G+ + + ++ ++ Y C+L +Y
Sbjct: 776 LMARKQGMA--DIISYNTIIAAHAKNGDFRSMIYFVQRMQEAGFPVSLEAYNCMLDAYGK 833
Query: 234 LGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTE 274
G L+E ++ Q + A +FD N ++ + G E
Sbjct: 834 AGQLEEFAAVL-QKMERAGCEFDHYTYNIMINIYGRKGWIE 873
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Query: 68 ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAAT 127
+R++++ + YN M+ Y GQ+E+ A V+++++R D +TYN+ I+
Sbjct: 810 QRMQEAGFPVSLEAYNCMLDAYGKAGQLEEFAAVLQKMERAGCEFDHYTYNIMINIYGRK 869
Query: 128 LNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
I+ V L E+ GG D Y L+ Y A
Sbjct: 870 GWIEGVANVLAELK-SRGGEPDLYSYNTLIKAYGIAG 905
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 44/234 (18%), Positives = 100/234 (42%), Gaps = 8/234 (3%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
E + L+ Y E+AE + + + ++ N + YN ++T Y V ++K V +
Sbjct: 368 ENWLVRLNAYCQQGKMEEAELVLKSLVDEGIALNVVAYNTVITGYGKVSDMQKAMEVFDR 427
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+K + PD TY I Q + ++ +SG + + ++N+ A
Sbjct: 428 LKSAGLAPDETTYRSMIEGFGRADKYKQAILYYRKLR-NSGFKPNASNFYTMINLL--AR 484
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
H + ++ ++E ++ + L+ Y +G K+ QI K+ K + +
Sbjct: 485 HDDSEGATEILEDMRAAGCQCSSIVTVLVRAYGSVGRMHKVLQILKACFYKKILFDATSC 544
Query: 225 ICILSSYLMLGHLKEVGEIIDQ--WKQSATSDFDISACNRLLGAFSDVGLTEKA 276
+++ ++ ++E ++ + WK SDF+ + + L+ + + G + A
Sbjct: 545 SILVTGFVQNSLVEEAMRVLREKKWKD---SDFEDNLYHILICSCKEAGCCDDA 595
>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
Length = 568
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 62/115 (53%), Gaps = 1/115 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT+L++ + ++ ++LF+ + + + ++YN ++ + + G +++ ++ E+
Sbjct: 364 TYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM 423
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
++K + PD TYN + +D+ +K +DEM+ G D V Y L++ Y
Sbjct: 424 EKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMT-KRGIQPDLVTYNTLISGY 477
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 85/186 (45%), Gaps = 9/186 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L++ + +KA E+FE + + + + Y ++ GQV++ + +E
Sbjct: 329 TYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEA 388
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
R+ + PD+ YN I+S + + NID+ + + EM DD V Y L+
Sbjct: 389 VRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDD-VTYNTLMRGLCLLGR 447
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
V+ + E K Q +TY+ LI Y+ G+ + +LR+ + +M ++ +
Sbjct: 448 -VDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGD------VKDALRI-RNEMMNKGFN 499
Query: 226 CILSSY 231
L +Y
Sbjct: 500 PTLLTY 505
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 113/278 (40%), Gaps = 15/278 (5%)
Query: 17 RIDLMTKVFG--IHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSN 74
R+D KVF + GE E + Y AL+ Y + A +R+ +
Sbjct: 236 RVDEAVKVFDEMLTKGEVKPEAV--------MYNALIGGYCDQGKLDTALLYRDRMVERG 287
Query: 75 LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVK 134
++ YN ++ G+ + +VEE+ K + D+FTYN+ I+ N+ +
Sbjct: 288 VAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKAL 347
Query: 135 KFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLV-EAEKSITQRQWITYDFLI 193
+ + MS G V Y +L IY + E+ L EA + + + Y+ LI
Sbjct: 348 EIFENMS-RRGVRATVVTYTSL--IYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALI 404
Query: 194 ILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATS 253
++ GN D+ +I + + Y ++ +LG + E ++ID+ +
Sbjct: 405 NSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQ 464
Query: 254 DFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 291
D+ N L+ +S G + A ++ K PT
Sbjct: 465 P-DLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPT 501
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 120/294 (40%), Gaps = 45/294 (15%)
Query: 37 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 96
LPL + T+ +L A +A EL ++ + N A+ YN ++ + S G+V+
Sbjct: 150 LPLC---TTTFNIMLRHLCSAGKPARALELLRQMPRPN----AVTYNTVIAGFCSRGRVQ 202
Query: 97 KVALVVEEIK-RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM--------------- 140
++ E++ R + P+ +TY IS +D+ K DEM
Sbjct: 203 AALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNA 262
Query: 141 ----SCDSGGSDDWVKYVN------LVNIYITASHLVNA--------ESSTLVE--AEKS 180
CD G D + Y + + T + LV+A E+ LVE K
Sbjct: 263 LIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKG 322
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 240
+ TY+ LI + GN K +I++++ + T Y ++ + G ++E
Sbjct: 323 LAL-DVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQET 381
Query: 241 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
++ D+ + D+ N L+ + S G ++A E + +K AP + +
Sbjct: 382 DKLFDEAVRRGIRP-DLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVT 434
>gi|302782563|ref|XP_002973055.1| hypothetical protein SELMODRAFT_413483 [Selaginella moellendorffii]
gi|300159656|gb|EFJ26276.1| hypothetical protein SELMODRAFT_413483 [Selaginella moellendorffii]
Length = 547
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 115/253 (45%), Gaps = 17/253 (6%)
Query: 18 IDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNL-S 76
IDL+++V + F+ LP K+ E YT LL +Y AE ++ +K+ L S
Sbjct: 135 IDLVSRV-SVTRAREMFDNLPADWKSREAYTVLLSMYVRHSMAADAESIYTTLKRWGLRS 193
Query: 77 FNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKF 136
+ + N M+TLY KVA ++ + + ++ ++N+ + + +++
Sbjct: 194 ISPI--NMMLTLYQKHQVFWKVAELIRDAEEAGQSLNMCSFNILLPMTFRAGGVAEMESL 251
Query: 137 LDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLV---EAEKSITQRQWITYDFLI 193
++ M +S D Y L + Y A + A+ +V E R TY+ +I
Sbjct: 252 VEMM--ESKNFLDEHTYCMLASSYGRAGMVDKAKEMLMVVEDGMETGKFNRLRRTYNVII 309
Query: 194 ILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLG--HLKEVGEIIDQWKQSA 251
++Y +G+ + + +IW ++ T+ +YIC++ S +G L E G + +A
Sbjct: 310 VIYGFIGDVEGVKRIWDI--TSRMDPTAEDYICMIRSSAKVGLFELAESGFL----ALAA 363
Query: 252 TSDFDISACNRLL 264
I+ CN +L
Sbjct: 364 QRKMHITVCNVML 376
>gi|326528911|dbj|BAJ97477.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 913
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 91/207 (43%), Gaps = 2/207 (0%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y+ ++H + + ++AEEL +++ + Y+ MM Y + +K +V E +K
Sbjct: 385 YSNIIHAHCQSGNMDRAEELVHEMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLK 444
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
P I +Y I+ + + EM SG + Y L++ +I
Sbjct: 445 ECCFTPSIISYGCLINLYVKIGKVAKAIAISKEME-SSGIKHNNKTYSMLISGFIHLHDF 503
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 226
NA E KS Q Y+ LI + +GN D+ +I + ++ + + ++R +
Sbjct: 504 TNA-FRIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRP 562
Query: 227 ILSSYLMLGHLKEVGEIIDQWKQSATS 253
I+ + + G +K +I+D ++S +
Sbjct: 563 IIEGFAVAGDMKRALDILDLMRRSGCA 589
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 83/188 (44%), Gaps = 4/188 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT ++ YA KA E F ++K+ L + +Y ++ G+++ V E+
Sbjct: 629 TYTIIMRGYAATGDIAKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREM 688
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ + + F YN+ I A ++ + + +M D G + Y + +N A
Sbjct: 689 SSQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKED-GVPPNIHTYTSYINACCKAGD 747
Query: 166 LVNAESSTLVEAEKSITQRQWI-TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
+ A+ T+++ + + + TY LI +A D+ + ++ +++ K Y
Sbjct: 748 MQRAQ--TVIDEMSDVGLKPNLKTYTTLIKGWARASLPDRALKCFEEMKLAGLKPDEAAY 805
Query: 225 ICILSSYL 232
C+++S L
Sbjct: 806 HCLVTSLL 813
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 32/175 (18%), Positives = 83/175 (47%), Gaps = 8/175 (4%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 102
++ + ++ +A A ++A ++ + +++S + + YN ++ + QVE+ V+
Sbjct: 556 SNRAFRPIIEGFAVAGDMKRALDILDLMRRSGCAPTVMTYNALIHGLIRKNQVERAVSVL 615
Query: 103 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 162
++ + P+ TY + + AAT +I + ++ ++ + G D Y L+
Sbjct: 616 NKMSIAGITPNEHTYTIIMRGYAATGDIAKAFEYFTKIK-EGGLKLDVYIYETLLRACCK 674
Query: 163 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 217
+ + +A + T + + I + ++ Y+ LI +A G+ +W++ + KQ
Sbjct: 675 SGRMQSALAVTREMSSQKIARNTFV-YNILIDGWARRGD------VWEAADLMKQ 722
>gi|224104097|ref|XP_002313317.1| predicted protein [Populus trichocarpa]
gi|222849725|gb|EEE87272.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 113/266 (42%), Gaps = 25/266 (9%)
Query: 23 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 82
K+F + + ++E ++TYT LL + + E+ LFE + L +Y
Sbjct: 100 KIFELLRKQHWYE------PRTKTYTKLLMMLGKCRQPEEGSFLFEVMLSDGLKPTIDVY 153
Query: 83 NEMMTLYMSVGQVEKVALVVEEIKR-KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 141
+++ Y GQ++K +V E+K PD++TY++ I+ C + ++ L EMS
Sbjct: 154 TALVSAYGKSGQLDKAFSIVVEMKAISECKPDVYTYSILINCCIKLHRFELIRGILAEMS 213
Query: 142 -----CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILY 196
C + V Y +++ Y A E++ E + T++ +I Y
Sbjct: 214 YLGIECST------VTYNTIIDGYGKAKMFEEMENTLTDMIESGSSVPDLFTFNSIIGAY 267
Query: 197 AGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSY---LMLGHLKEVGEIIDQWKQSATS 253
G DK+++ + ++ + + + ++ SY M G ++ V E +++ S +
Sbjct: 268 GSKGRIDKMEKWYTEFQLMGLRQDIKTFNILIRSYGKAGMYGKMRSVLEFMEKRFFSPS- 326
Query: 254 DFDISACNRLLGAFSDVGLTEKANEF 279
I N + F G E E+
Sbjct: 327 ---IVTHNIFIETFGKAGDIETMEEY 349
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 95/214 (44%), Gaps = 4/214 (1%)
Query: 78 NALMYNEMMTLYMSVGQVEKVA-LVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKF 136
+ + YN ++ Y E++ + + I+ + VPD+FT+N I + + ID+++K+
Sbjct: 220 STVTYNTIIDGYGKAKMFEEMENTLTDMIESGSSVPDLFTFNSIIGAYGSKGRIDKMEKW 279
Query: 137 LDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILY 196
E D +K N++ + + S L EK +T++ I +
Sbjct: 280 YTEFQLMGLRQD--IKTFNILIRSYGKAGMYGKMRSVLEFMEKRFFSPSIVTHNIFIETF 337
Query: 197 AGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFD 256
G+ + +++ + ++ K + Y ++S+Y GH+ +V I+ Q + S D
Sbjct: 338 GKAGDIETMEEYFSKMKHLGIKPNTVTYCSLVSAYSKAGHIMKVDSILRQVENSDVI-LD 396
Query: 257 ISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
N ++ A+ G EK +E + + + C P
Sbjct: 397 TPFFNCVISAYGRAGDIEKMSELFLGMEGRKCKP 430
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/193 (20%), Positives = 91/193 (47%), Gaps = 2/193 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+ +++ Y +K E+ + + L + +N ++ Y G K+ V+E +
Sbjct: 259 TFNSIIGAYGSKGRIDKMEKWYTEFQLMGLRQDIKTFNILIRSYGKAGMYGKMRSVLEFM 318
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+++ P I T+N++I + +I+ ++++ +M G + V Y +LV+ Y A H
Sbjct: 319 EKRFFSPSIVTHNIFIETFGKAGDIETMEEYFSKMK-HLGIKPNTVTYCSLVSAYSKAGH 377
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
++ + S L + E S ++ +I Y G+ +K+ +++ + K K S +
Sbjct: 378 IMKVD-SILRQVENSDVILDTPFFNCVISAYGRAGDIEKMSELFLGMEGRKCKPDSITFA 436
Query: 226 CILSSYLMLGHLK 238
++ +Y G ++
Sbjct: 437 TMIQAYNAQGMIE 449
>gi|302766812|ref|XP_002966826.1| hypothetical protein SELMODRAFT_11024 [Selaginella moellendorffii]
gi|300164817|gb|EFJ31425.1| hypothetical protein SELMODRAFT_11024 [Selaginella moellendorffii]
Length = 484
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 112/237 (47%), Gaps = 15/237 (6%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSN-LSFNALMYNEMMTLYMSVGQVEKVALVVE 103
E YT + K +A++L +++++ + L+ +++ +N ++ + + GQ+E+ VV+
Sbjct: 52 ECYTVAIAEVVAEKKMSEAQQLLKQMEEEDGLAPDSVCFNTVINGWCNEGQMEEAMRVVQ 111
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM---SCDSGGSDDWVKYVNLVNIY 160
E+++KN P TYN I +Q ++ + + + +S S+D ++ V N+
Sbjct: 112 EMRQKNCRPTTSTYNTLIKGYGVAGQAEQAQQLVLHLLNKTRNSPSSEDGLEPVARPNLR 171
Query: 161 ITASHLVNA--ESSTLVEAEKSIT-------QRQWITYDFLIILYAGLGNKDKIDQIWKS 211
T + L+NA L EA + + Q +TY+ L YA G +++ +
Sbjct: 172 -TMNTLLNAWCREGRLEEAWRVVAMIKSAGMQPDAVTYNTLAKAYAAAGRVAELEDLIAD 230
Query: 212 LRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFS 268
++ + K R Y ++S Y G + +++ + K D+ A N LL +S
Sbjct: 231 MKNARLKPNLRTYAILISCYCQNGMPERGLQLLSRLKFEGLHP-DVVAFNTLLKGYS 286
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 50/105 (47%), Gaps = 2/105 (1%)
Query: 18 IDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSF 77
+ L+ K S E E P++ T LL+ + E+A + +K + +
Sbjct: 146 LHLLNKTRNSPSSEDGLE--PVARPNLRTMNTLLNAWCREGRLEEAWRVVAMIKSAGMQP 203
Query: 78 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 122
+A+ YN + Y + G+V ++ ++ ++K + P++ TY + IS
Sbjct: 204 DAVTYNTLAKAYAAAGRVAELEDLIADMKNARLKPNLRTYAILIS 248
>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
Length = 1041
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 91/211 (43%), Gaps = 23/211 (10%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY AL++ A E+A ELF+ + L+ NA+ Y ++ Y G + K + +E+
Sbjct: 693 TYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEM 752
Query: 106 KRKNVVPDIFTYNLWISSC--------AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 157
K V PD F Y+ I C A +L ++ V+K S + D + K ++
Sbjct: 753 TLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFASTSSLNALMDGFCKSGKVI 812
Query: 158 NIYITASHLVNAESSTLVE--AEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMT 215
E++ L+E +K + + +TY LI + G + +Q + ++
Sbjct: 813 ------------EANQLLEDMVDKHV-KPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKR 859
Query: 216 KQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 246
+ Y +LS Y M G E+ + D+
Sbjct: 860 NLMPNALTYTALLSGYNMAGRRSEMFALFDE 890
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/230 (20%), Positives = 96/230 (41%), Gaps = 3/230 (1%)
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
E A +FE + + NA++Y ++ ++ G+ ++ +++ + +K V PD+ YN
Sbjct: 463 EDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSV 522
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
I + +++ K +L EM + G + Y L++ Y + + A+ E
Sbjct: 523 IIGLCKSRKMEEAKDYLVEM-IERGLKPNVYTYGALIHGYCKSGEMQVAD-RYFKEMLGC 580
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 240
+ LI Y G+ + I++ + R Y ++ L G L+
Sbjct: 581 GIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGA 640
Query: 241 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
E++ ++ + D+ N ++ F G KA + H + QK +P
Sbjct: 641 MELLSEFLEKGLVP-DVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISP 689
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/209 (20%), Positives = 92/209 (44%), Gaps = 10/209 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT L++ + A ++ + L +++ S + + YN ++ G+V++ + + +
Sbjct: 238 TYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLM 297
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+K +V D+FTY++ I + K L+EM G V Y L++ ++
Sbjct: 298 DKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMF-SKGLKPGHVAYTALIDGFMR--- 353
Query: 166 LVNAESSTLVEAEKSITQR----QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 221
+S ++ + R TY+ L+ G+ +K D + + M K +
Sbjct: 354 --QGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDT 411
Query: 222 RNYICILSSYLMLGHLKEVGEIIDQWKQS 250
+ Y ++ YL + V +++ + K+S
Sbjct: 412 QTYNNMIEGYLKEQNTSRVKDLLSEMKKS 440
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 114/285 (40%), Gaps = 10/285 (3%)
Query: 14 YATRIDLMTKVFGIHSGERYFE---GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERV 70
Y I K + +RYF+ G + A TAL+ Y T +A +F +
Sbjct: 554 YGALIHGYCKSGEMQVADRYFKEMLGCGI-APNDVVCTALIDGYCKEGSTTEATSIFRCM 612
Query: 71 KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 130
++ + Y+ ++ + G+++ ++ E K +VPD+FTYN IS I
Sbjct: 613 LGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGI 672
Query: 131 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 190
+ + L E C G S + + Y L+N A + A K + +TY
Sbjct: 673 GKAFQ-LHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAH-NAVTYA 730
Query: 191 FLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQS 250
+I Y GN K +++ + + S Y ++ G+ ++ + + +S
Sbjct: 731 TIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKA---LSLFLES 787
Query: 251 ATSDF-DISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
F S+ N L+ F G +AN+ ++ K+ P + +
Sbjct: 788 VQKGFASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVT 832
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 78/169 (46%), Gaps = 6/169 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT L+ + + ++AE+ F +++ NL NAL Y +++ Y G+ ++ + +E+
Sbjct: 832 TYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEM 891
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVK--KFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
K++ PD T+++ I A D VK K +D+M G V +V L++
Sbjct: 892 IAKDIEPDGVTWSVMID--AHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHV-LIDPLCRK 948
Query: 164 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 212
H V+ L + E+ T L+ + G D ++ KS+
Sbjct: 949 EH-VSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSM 996
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 49/248 (19%), Positives = 96/248 (38%), Gaps = 9/248 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY AL+ EKA+ L + + + YN M+ Y+ +V ++ E+
Sbjct: 378 TYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEM 437
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K+ N+VP +T + I+ +I+ + E+ G + V Y L+ ++
Sbjct: 438 KKSNLVPTAYTCGMIINGLCRHGSIEDASRVF-EIMVSLGVKPNAVIYTTLIKGHVQEGR 496
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN-- 223
A V +K + Q + Y+ +II GL K+++ L ++ N
Sbjct: 497 FQEAVRILKVMDKKGV-QPDVLCYNSVII---GLCKSRKMEEAKDYLVEMIERGLKPNVY 552
Query: 224 -YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 282
Y ++ Y G ++ + + D+ C L+ + G T +A
Sbjct: 553 TYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDV-VCTALIDGYCKEGSTTEATSIFRC 611
Query: 283 LLQKNCAP 290
+L ++ P
Sbjct: 612 MLGRSVHP 619
Score = 40.8 bits (94), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 99/250 (39%), Gaps = 7/250 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY AL+H Y + + A+ F+ + ++ N ++ ++ Y G + + +
Sbjct: 553 TYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCM 612
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
++V PD+ TY+ I + + L E + G D Y ++++ +
Sbjct: 613 LGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEF-LEKGLVPDVFTYNSIISGFCKQGG 671
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ A +K I+ ITY+ LI G ++ +++ + + Y
Sbjct: 672 IGKAFQLHEYMCQKGISP-NIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYA 730
Query: 226 CILSSYLMLGHLKEVGEIIDQW--KQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 283
I+ Y G+L + + D+ K F SA L+ G TEKA +
Sbjct: 731 TIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSA---LIDGCRKEGNTEKALSLFLES 787
Query: 284 LQKNCAPTNA 293
+QK A T++
Sbjct: 788 VQKGFASTSS 797
>gi|357123530|ref|XP_003563463.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Brachypodium distachyon]
Length = 862
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 118/299 (39%), Gaps = 44/299 (14%)
Query: 34 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 93
F LP ++T+ +YT+L+ YA E+A L +++K + ++ A YN ++
Sbjct: 158 FHDLPADSRTALSYTSLIAAYARNALHEEARALLDQMKAAGVAPTAATYNTVLAACARAT 217
Query: 94 ----QVEKVALVVEEIKR---KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGG 146
+ + + E++ V PD+ TYN +++ A DQ + L M ++G
Sbjct: 218 DPPVPFDMLLGLFAEMRHDVSPAVRPDLTTYNTLLAAAAVRSLNDQAEMLLRAM-LEAGV 276
Query: 147 SDDWVKYVNLVNIYITASH-------------------------LVNAESSTLVEAEKSI 181
D Y ++V+ + A L+ A + AE
Sbjct: 277 LPDTASYRHIVDAFARAGDLSRVAELFREMADTGHTPDPSAYLGLMEAHTRVGATAEAVA 336
Query: 182 TQRQW---------ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYL 232
RQ TY L+ LY G D + ++++ +R T+ Y + S +
Sbjct: 337 VLRQMQADGCAPTAATYRVLLDLYGRQGRFDGVRELFREMRTAVPPDTA-TYNVLFSVFG 395
Query: 233 MLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 291
G KEV E+ ++ + D+ C +L A GL E A E + ++ PT
Sbjct: 396 DGGFFKEVVELFHDMLRTGI-EPDMETCEGVLVACGQGGLHEDAREVLDYITKEGMVPT 453
>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
Length = 799
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 101/245 (41%), Gaps = 3/245 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT ++ A+ ++AE +F+++ + N YN ++ Y+S+G+ ++V ++EE+
Sbjct: 236 TYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEM 295
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ + PD +TY ++ + + F D M G Y L++ Y T
Sbjct: 296 SARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSM-IRKGIKPKVSTYGILIHGYATKGA 354
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
L S + E ++ I ++ YA G DK I+ +R NY
Sbjct: 355 LSEMHSFLDLMVENGLSPDHHI-FNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYG 413
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 285
++ + LG + + +Q + +I N L+ V E+A E +L
Sbjct: 414 ALIDALCKLGRVDDAEVKFNQMINEGVTP-NIVVFNSLVYGLCTVDKWERAEELVYEMLD 472
Query: 286 KNCAP 290
+ P
Sbjct: 473 QGICP 477
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 5/160 (3%)
Query: 13 DYATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLH-LYAGAKWTEKAEELFER 69
+Y ID + K+ + E F + T + +L++ L KW E+AEEL
Sbjct: 411 NYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKW-ERAEELVYE 469
Query: 70 VKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLN 129
+ + NA+ +N ++ +VG+V + +++ ++ V PD F+Y IS T
Sbjct: 470 MLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGR 529
Query: 130 IDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 169
D+ +K D M G S V Y L++ Y +AS + +A
Sbjct: 530 TDEAEKVFDGMV-SIGLSPTEVTYNTLLHGYCSASRIDDA 568
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 53/113 (46%), Gaps = 1/113 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+YT L+ Y T++AE++F+ + LS + YN ++ Y S +++ + E+
Sbjct: 516 SYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREM 575
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 158
RK V P + TYN + T + K+ M +SG D Y ++N
Sbjct: 576 LRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNM-INSGTKCDIYTYNIILN 627
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 97/249 (38%), Gaps = 8/249 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSN---LSFNALMYNEMMTLYMSVGQVEKVALVV 102
+YT LL K E+A EL + + N + Y+ ++ + + GQV+K +
Sbjct: 163 SYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGFFTEGQVDKPYNLF 222
Query: 103 EEIKRKNVVPDIFTYNLWISS-CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 161
E+ + + PD+ TY I C A L D+ + +M D+G + Y L++ Y+
Sbjct: 223 LEMIDRGIPPDVVTYTTVIDGLCKAQL-FDRAEGVFQQM-IDNGFKPNNYTYNCLIHGYL 280
Query: 162 TASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 221
+ L E + TY L+ G + + S+ K
Sbjct: 281 SIGKWKEV-VQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKV 339
Query: 222 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 281
Y ++ Y G L E+ +D ++ S D N A++ G+ +KA +
Sbjct: 340 STYGILIHGYATKGALSEMHSFLDLMVENGLSP-DHHIFNIFFSAYAKCGMIDKAMDIFN 398
Query: 282 LLLQKNCAP 290
+ Q +P
Sbjct: 399 KMRQHGLSP 407
>gi|297737146|emb|CBI26347.3| unnamed protein product [Vitis vinifera]
Length = 862
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 109/247 (44%), Gaps = 4/247 (1%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 102
+SE Y+A + Y +AE+ F K+S + L +N M+ Y + EK ++
Sbjct: 479 SSECYSANIDAYGERGHILEAEKAFLCCKESR-KLSVLEFNVMIKAYGISNRYEKACQLI 537
Query: 103 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 162
+ ++ V+PD F+YN I A+ + K +L +M ++ D + Y +++ +I
Sbjct: 538 DSMENHGVLPDKFSYNSLIQILASADLPHKAKFYLMKMQ-ETQLVSDCIPYCAVISSFIK 596
Query: 163 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 222
L AE E Q + Y LI +A +GN + +LR M +
Sbjct: 597 LGQLEMAE-GLFKEMIGYNVQPDVVVYGILINAFADVGNVREAVNYVNALRNAGLPMNAV 655
Query: 223 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 282
Y ++ Y +G+L+E E + S D+ + N ++ +S+ + ++A E
Sbjct: 656 IYNSLIKLYTKVGYLEEAQEAYKMLQASEVGP-DVYSSNCMIDLYSERSMVKQAEEIFES 714
Query: 283 LLQKNCA 289
L +K A
Sbjct: 715 LKRKGDA 721
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 115/224 (51%), Gaps = 6/224 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+Y +L+ + A A KA+ +++++ L + + Y +++ ++ +GQ+E + +E+
Sbjct: 551 SYNSLIQILASADLPHKAKFYLMKMQETQLVSDCIPYCAVISSFIKLGQLEMAEGLFKEM 610
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
NV PD+ Y + I++ A N+ + +++ + ++G + V Y +L+ +Y +
Sbjct: 611 IGYNVQPDVVVYGILINAFADVGNVREAVNYVNALR-NAGLPMNAVIYNSLIKLYTKVGY 669
Query: 166 LVNA-ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
L A E+ +++A S + + +I LY+ + ++I++SL+ K ++
Sbjct: 670 LEEAQEAYKMLQA--SEVGPDVYSSNCMIDLYSERSMVKQAEEIFESLK-RKGDANEFSF 726
Query: 225 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFS 268
+L Y +G LKE +I+ + ++ D+ + N +LG ++
Sbjct: 727 AMMLCMYKRIGKLKEAFQIVQKMRELGLVT-DLLSYNNVLGFYA 769
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 89/203 (43%), Gaps = 3/203 (1%)
Query: 38 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 97
P +S TY L+ Y A +A + F + + + N + +N M+ + + GQ+E+
Sbjct: 300 PHVCLSSYTYNTLIDTYGKAGQLREASDTFAWMLREGIIPNTVTFNTMIHICGNHGQLEE 359
Query: 98 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 157
A ++++++ PD TYN+ IS A NID+ + +M ++ D V Y L+
Sbjct: 360 AASLMQKMEELRCPPDTRTYNILISLHAKHNNIDRAASYFKKMK-EARLEPDLVSYRTLL 418
Query: 158 NIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 217
+ + HLV + E ++ + T L +Y G K +W +
Sbjct: 419 YAF-SIRHLVGEAEILVSEMDERGLEIDEFTQSALTRMYIEAGMLKK-SWLWFRRFHLEG 476
Query: 218 KMTSRNYICILSSYLMLGHLKEV 240
M+S Y + +Y GH+ E
Sbjct: 477 NMSSECYSANIDAYGERGHILEA 499
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 42/229 (18%), Positives = 86/229 (37%), Gaps = 52/229 (22%)
Query: 46 TYTALLHLYAGAKWTEKAEELF-----ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
T ++ Y A +KAE+ F E Q ++ ++ YN ++ Y GQ+ + +
Sbjct: 268 TMGVVVQTYKKAGEFKKAEQFFKNWSLESASQPHVCLSSYTYNTLIDTYGKAGQLREASD 327
Query: 101 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
+ R+ ++P+ T+N I C +++ + +M
Sbjct: 328 TFAWMLREGIIPNTVTFNTMIHICGNHGQLEEAASLMQKM-------------------- 367
Query: 161 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 220
E+ TY+ LI L+A N D+ +K ++ + +
Sbjct: 368 -----------------EELRCPPDTRTYNILISLHAKHNNIDRAASYFKKMKEARLEPD 410
Query: 221 SRNYICILSSY----------LMLGHLKEVGEIIDQWKQSATSDFDISA 259
+Y +L ++ +++ + E G ID++ QSA + I A
Sbjct: 411 LVSYRTLLYAFSIRHLVGEAEILVSEMDERGLEIDEFTQSALTRMYIEA 459
>gi|296083087|emb|CBI22491.3| unnamed protein product [Vitis vinifera]
Length = 548
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 71/168 (42%), Gaps = 2/168 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T A++ +Y + KA E+ + +K+ + + YN +M +Y E+ ++ EI
Sbjct: 351 TLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSANFERSEEILREI 410
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K + PDI +YN I + + + L EM +SG + D + Y + Y S
Sbjct: 411 LAKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMR-ESGPAPDIITYNTFIASYAADSM 469
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 213
V A + Q TY+ ++ Y L +D+ +LR
Sbjct: 470 FVEAIDVVCYMIKHGCKPNQS-TYNSIVDWYCKLNRRDEASMFVNNLR 516
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 72/153 (47%), Gaps = 4/153 (2%)
Query: 46 TYTALLHLYAG-AKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
T+ AL+ ++ K+TE + +FE +K S + + +N +++++ G +V+ V +E
Sbjct: 141 TFNALIKMHGNRGKFTEMMK-VFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKE 199
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+KR VP+ T+N ISS + + DQ M ++G + D Y N V +
Sbjct: 200 MKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRM-LEAGVNPDLSSY-NAVLAALARG 257
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYA 197
L L E + + +TY L+ YA
Sbjct: 258 GLWKQSEKVLAEMKDGRCKPNELTYCSLLHAYA 290
Score = 44.3 bits (103), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 75/188 (39%), Gaps = 37/188 (19%)
Query: 46 TYTALLHLYAGAKWTEK----AEELF---------------------------ER----V 70
TY +LLH YA K E+ AEE++ ER +
Sbjct: 281 TYCSLLHAYANGKEIERMCALAEEIYSGIIEPRAVLLKTLVLVNSKCDLLMETERAFLEL 340
Query: 71 KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 130
+Q S + N M+++Y V K +++ +KR P + TYN + + + N
Sbjct: 341 RQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSANF 400
Query: 131 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 190
++ ++ L E+ G D + Y ++ Y + +A S L E +S ITY+
Sbjct: 401 ERSEEILREI-LAKGIRPDIISYNTVIYAYCRNGRMRDA-SRVLSEMRESGPAPDIITYN 458
Query: 191 FLIILYAG 198
I YA
Sbjct: 459 TFIASYAA 466
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 40/77 (51%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT LL + A + A ++FE ++ N +N ++ ++ + G+ ++ V E+I
Sbjct: 106 TYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDI 165
Query: 106 KRKNVVPDIFTYNLWIS 122
K PDI T+N +S
Sbjct: 166 KTFQCSPDIVTWNTLLS 182
>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
Length = 814
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 106/270 (39%), Gaps = 52/270 (19%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVK 71
Y T ID + K + + + A T TY L++ A E+AEELF +
Sbjct: 263 YNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMA 322
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
S N+++Y ++ + G++++ + +E+ PD+ T+ + I + N +
Sbjct: 323 ASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFE 382
Query: 132 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 191
Q K +EM GG V +TY
Sbjct: 383 QAAKSFEEMM--RGGCKPNV-----------------------------------VTYTT 405
Query: 192 LIILYAGLGNKDKIDQIWKSLRMTKQKMT------SRNYICILSSYLMLGHLKEVGEIID 245
+I GL KI ++ + R+ K + S YIC+L + LG L E +++D
Sbjct: 406 II---QGL---SKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLD 459
Query: 246 QWKQSATSDFDISACNRLLGAFSDVGLTEK 275
+ + ++S ++ + L+ D G EK
Sbjct: 460 ELDKCSSSP-NLQLYSSLVNGLCDGGSVEK 488
>gi|302784232|ref|XP_002973888.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
gi|300158220|gb|EFJ24843.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
Length = 399
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 107/250 (42%), Gaps = 13/250 (5%)
Query: 46 TYTALLHLYAGAKWTEKAEELF-ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
TY L+ + A + A +L E +Q ++ MYN + G+V + VV+
Sbjct: 20 TYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKN 79
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+K PD+ T+N I+ +D+ ++ LDEM SG + + V Y L+N +A
Sbjct: 80 MKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEME-RSGFAANLVTYNTLINGLSSAG 138
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR-- 222
+ E+ +++ + Q TY+ +I G +ID+ + L KQ+
Sbjct: 139 R--SGEAVLVMQGMTTTPDTQ--TYNAII---HGFCKSGEIDRAYGFLEEMKQRAGCSPD 191
Query: 223 --NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 280
Y +++ +L++ E++ + + A N L+ + ++A E
Sbjct: 192 TFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELL 251
Query: 281 MLLLQKNCAP 290
+L+ CAP
Sbjct: 252 SSMLEHGCAP 261
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 68/162 (41%), Gaps = 6/162 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELF-ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
TY+ L++ + KA+EL E + + + + + +N ++ Y +++ ++
Sbjct: 194 TYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSS 253
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+ PD+ TY+ I ++D+ L++M G D V Y LV A
Sbjct: 254 MLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMV-SRGCKPDVVTYTVLVTGLCKAG 312
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKID 206
+V A E T +TY +++ GL DK+D
Sbjct: 313 KMVEACRLVKRMLEDGCTP-NAVTYS---LVFDGLCKIDKLD 350
>gi|357502623|ref|XP_003621600.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496615|gb|AES77818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 890
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 103/245 (42%), Gaps = 3/245 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY +LL + A E A++L + + + YN + GQ++ V EE+
Sbjct: 321 TYNSLLSVCASKGMWEMAQKLLSEMDHRCIVPDVFTYNTYLDTLCKAGQIDLARRVFEEM 380
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K V P++ TY+ + A ++ +EM S D V Y LV IY +
Sbjct: 381 SSKRVWPNVVTYSAMMDGYAKANLLEDALNLYEEMKLRSVCLDR-VSYNTLVGIYEKLGN 439
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
L A E E+S R +TY+ L+ Y G D++ ++++ ++ + Y
Sbjct: 440 LDEA-IEKCKEMERSGINRDVVTYNALLSGYGKHGMYDEVRRLFEEMKARNIYPNTLTYS 498
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 285
++ Y +E ++ ++K A + D+ + ++ GL E + M +++
Sbjct: 499 TMIDMYTKGEMFQEAMDVYREFKM-ARLEIDVVFYSAIIDTLCKNGLMESSIMLLMAMME 557
Query: 286 KNCAP 290
K P
Sbjct: 558 KGIKP 562
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 65/126 (51%), Gaps = 7/126 (5%)
Query: 15 ATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSN 74
A +IDL +VF S +R + + TY+A++ YA A E A L+E +K +
Sbjct: 367 AGQIDLARRVFEEMSSKRVWPNV-------VTYSAMMDGYAKANLLEDALNLYEEMKLRS 419
Query: 75 LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVK 134
+ + + YN ++ +Y +G +++ +E++R + D+ TYN +S D+V+
Sbjct: 420 VCLDRVSYNTLVGIYEKLGNLDEAIEKCKEMERSGINRDVVTYNALLSGYGKHGMYDEVR 479
Query: 135 KFLDEM 140
+ +EM
Sbjct: 480 RLFEEM 485
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 88/184 (47%), Gaps = 2/184 (1%)
Query: 65 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 124
+ ++ + + L + L YN ++++ S G E ++ E+ + +VPD+FTYN ++ +
Sbjct: 305 KFYDEMIANGLMPDRLTYNSLLSVCASKGMWEMAQKLLSEMDHRCIVPDVFTYNTYLDTL 364
Query: 125 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR 184
ID ++ +EMS + V Y +++ Y A+ L +A + +S+
Sbjct: 365 CKAGQIDLARRVFEEMSSKRVWP-NVVTYSAMMDGYAKANLLEDALNLYEEMKLRSVCLD 423
Query: 185 QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEII 244
+ ++Y+ L+ +Y LGN D+ + K + + Y +LS Y G EV +
Sbjct: 424 R-VSYNTLVGIYEKLGNLDEAIEKCKEMERSGINRDVVTYNALLSGYGKHGMYDEVRRLF 482
Query: 245 DQWK 248
++ K
Sbjct: 483 EEMK 486
Score = 38.1 bits (87), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 53/260 (20%), Positives = 105/260 (40%), Gaps = 37/260 (14%)
Query: 66 LFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCA 125
LFER + ++ M++ + G+ + + VVP++ TYN I + A
Sbjct: 235 LFERARLEGYGSTVHSFSAMISAFGRNGRFPDAVDLFRSMSSWGVVPNVITYNSIIDAGA 294
Query: 126 -ATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT------ASHLV----------- 167
++ D V KF DEM + G D + Y +L+++ + A L+
Sbjct: 295 KGEVSFDVVVKFYDEMIAN-GLMPDRLTYNSLLSVCASKGMWEMAQKLLSEMDHRCIVPD 353
Query: 168 ----NAESSTLVEA----------EKSITQRQW---ITYDFLIILYAGLGNKDKIDQIWK 210
N TL +A E+ ++R W +TY ++ YA + +++
Sbjct: 354 VFTYNTYLDTLCKAGQIDLARRVFEEMSSKRVWPNVVTYSAMMDGYAKANLLEDALNLYE 413
Query: 211 SLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDV 270
+++ + +Y ++ Y LG+L E E + ++S + D+ N LL +
Sbjct: 414 EMKLRSVCLDRVSYNTLVGIYEKLGNLDEAIEKCKEMERSGINR-DVVTYNALLSGYGKH 472
Query: 271 GLTEKANEFHMLLLQKNCAP 290
G+ ++ + +N P
Sbjct: 473 GMYDEVRRLFEEMKARNIYP 492
>gi|388499386|gb|AFK37759.1| unknown [Lotus japonicus]
Length = 500
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 88/199 (44%), Gaps = 37/199 (18%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNL-----SFNALM------------------- 81
TYTAL++ +A EKAEE+FE+++++ L S+NALM
Sbjct: 304 TYTALVNAFAREGLCEKAEEVFEQMQEAGLEPDVYSYNALMEAYSRAGFPYGAAEIFSLM 363
Query: 82 -----------YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 130
YN ++ Y G + V E++KR + P + ++ + +S+ + T N+
Sbjct: 364 QHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNV 423
Query: 131 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 190
+ + L++M C SG D +++N+Y E L E + TY+
Sbjct: 424 SKCEDILNQM-CKSGLKLDTFVLNSMLNLYGRLGQFGKME-EVLTVMENGSCEADISTYN 481
Query: 191 FLIILYAGLGNKDKIDQIW 209
LI Y G DK++ ++
Sbjct: 482 ILINRYGQAGFIDKMEGLF 500
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 102/236 (43%), Gaps = 9/236 (3%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 102
++ETYT L++LY + A ++F + N Y ++ + G EK V
Sbjct: 266 STETYTMLINLYGKDGKSFMALKVFNEMLSHKCKPNICTYTALVNAFAREGLCEKAEEVF 325
Query: 103 EEIKRKNVVPDIFTYNLWI---SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 159
E+++ + PD+++YN + S ++ + M C+ D Y LV+
Sbjct: 326 EQMQEAGLEPDVYSYNALMEAYSRAGFPYGAAEIFSLMQHMGCEP----DRASYNILVDA 381
Query: 160 YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 219
Y A L +AE + + ++ ++ L+ ++ GN K + I + + K+
Sbjct: 382 YGRAGFLNDAE-AVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKL 440
Query: 220 TSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEK 275
+ +L+ Y LG ++ E++ ++ + + DIS N L+ + G +K
Sbjct: 441 DTFVLNSMLNLYGRLGQFGKMEEVLTVM-ENGSCEADISTYNILINRYGQAGFIDK 495
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 107/279 (38%), Gaps = 38/279 (13%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
+TY L+ Y + EKAE +F +K L +A++YN + M G K +
Sbjct: 198 DTYALLIKAYCLSGLLEKAEAVFVEMKNYGLPSSAVVYNSYINGLMKGGNPNKAEEIFLR 257
Query: 105 IKRKNVVPDIFTYNLWIS-------------------SCAATLNIDQ----VKKFLDEMS 141
+KR P TY + I+ S NI V F E
Sbjct: 258 MKRDGCKPSTETYTMLINLYGKDGKSFMALKVFNEMLSHKCKPNICTYTALVNAFAREGL 317
Query: 142 C-----------DSGGSDDWVKYVNLVNIYITASHLVN-AESSTLVEAEKSITQRQWITY 189
C ++G D Y L+ Y A AE +L++ R +Y
Sbjct: 318 CEKAEEVFEQMQEAGLEPDVYSYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRA--SY 375
Query: 190 DFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQ 249
+ L+ Y G + + +++ ++ T ++++ +LS++ G++ + +I++Q +
Sbjct: 376 NILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCK 435
Query: 250 SATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 288
S D N +L + +G K E ++ +C
Sbjct: 436 SGLK-LDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSC 473
Score = 41.2 bits (95), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 58/125 (46%), Gaps = 2/125 (1%)
Query: 12 SDYATRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFER 69
+ Y +D + ++ E FE + T +++ LL ++ K E++ +
Sbjct: 373 ASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQ 432
Query: 70 VKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLN 129
+ +S L + + N M+ LY +GQ K+ V+ ++ + DI TYN+ I+
Sbjct: 433 MCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGF 492
Query: 130 IDQVK 134
ID+++
Sbjct: 493 IDKME 497
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 77/185 (41%), Gaps = 3/185 (1%)
Query: 110 VVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 169
+P+ TY L I + + +++ + EM + G V Y + +N + + A
Sbjct: 193 CIPNEDTYALLIKAYCLSGLLEKAEAVFVEMK-NYGLPSSAVVYNSYINGLMKGGNPNKA 251
Query: 170 ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILS 229
E + ++ + TY LI LY G +++ + K K Y +++
Sbjct: 252 EE-IFLRMKRDGCKPSTETYTMLINLYGKDGKSFMALKVFNEMLSHKCKPNICTYTALVN 310
Query: 230 SYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCA 289
++ G ++ E+ +Q Q A + D+ + N L+ A+S G A E L+ C
Sbjct: 311 AFAREGLCEKAEEVFEQM-QEAGLEPDVYSYNALMEAYSRAGFPYGAAEIFSLMQHMGCE 369
Query: 290 PTNAS 294
P AS
Sbjct: 370 PDRAS 374
>gi|359477372|ref|XP_002280003.2| PREDICTED: pentatricopeptide repeat-containing protein At3g23020
[Vitis vinifera]
Length = 881
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 109/247 (44%), Gaps = 4/247 (1%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 102
+SE Y+A + Y +AE+ F K+S + L +N M+ Y + EK ++
Sbjct: 498 SSECYSANIDAYGERGHILEAEKAFLCCKESR-KLSVLEFNVMIKAYGISNRYEKACQLI 556
Query: 103 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 162
+ ++ V+PD F+YN I A+ + K +L +M ++ D + Y +++ +I
Sbjct: 557 DSMENHGVLPDKFSYNSLIQILASADLPHKAKFYLMKMQ-ETQLVSDCIPYCAVISSFIK 615
Query: 163 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 222
L AE E Q + Y LI +A +GN + +LR M +
Sbjct: 616 LGQLEMAE-GLFKEMIGYNVQPDVVVYGILINAFADVGNVREAVNYVNALRNAGLPMNAV 674
Query: 223 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 282
Y ++ Y +G+L+E E + S D+ + N ++ +S+ + ++A E
Sbjct: 675 IYNSLIKLYTKVGYLEEAQEAYKMLQASEVGP-DVYSSNCMIDLYSERSMVKQAEEIFES 733
Query: 283 LLQKNCA 289
L +K A
Sbjct: 734 LKRKGDA 740
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 115/224 (51%), Gaps = 6/224 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+Y +L+ + A A KA+ +++++ L + + Y +++ ++ +GQ+E + +E+
Sbjct: 570 SYNSLIQILASADLPHKAKFYLMKMQETQLVSDCIPYCAVISSFIKLGQLEMAEGLFKEM 629
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
NV PD+ Y + I++ A N+ + +++ + ++G + V Y +L+ +Y +
Sbjct: 630 IGYNVQPDVVVYGILINAFADVGNVREAVNYVNALR-NAGLPMNAVIYNSLIKLYTKVGY 688
Query: 166 LVNA-ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
L A E+ +++A S + + +I LY+ + ++I++SL+ K ++
Sbjct: 689 LEEAQEAYKMLQA--SEVGPDVYSSNCMIDLYSERSMVKQAEEIFESLK-RKGDANEFSF 745
Query: 225 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFS 268
+L Y +G LKE +I+ + ++ D+ + N +LG ++
Sbjct: 746 AMMLCMYKRIGKLKEAFQIVQKMRELGLVT-DLLSYNNVLGFYA 788
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 89/203 (43%), Gaps = 3/203 (1%)
Query: 38 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 97
P +S TY L+ Y A +A + F + + + N + +N M+ + + GQ+E+
Sbjct: 319 PHVCLSSYTYNTLIDTYGKAGQLREASDTFAWMLREGIIPNTVTFNTMIHICGNHGQLEE 378
Query: 98 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 157
A ++++++ PD TYN+ IS A NID+ + +M ++ D V Y L+
Sbjct: 379 AASLMQKMEELRCPPDTRTYNILISLHAKHNNIDRAASYFKKMK-EARLEPDLVSYRTLL 437
Query: 158 NIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 217
+ + HLV + E ++ + T L +Y G K +W +
Sbjct: 438 YAF-SIRHLVGEAEILVSEMDERGLEIDEFTQSALTRMYIEAGMLKK-SWLWFRRFHLEG 495
Query: 218 KMTSRNYICILSSYLMLGHLKEV 240
M+S Y + +Y GH+ E
Sbjct: 496 NMSSECYSANIDAYGERGHILEA 518
>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
Length = 455
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 62/115 (53%), Gaps = 1/115 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT+L++ + ++ ++LF+ + + + ++YN ++ + + G +++ ++ E+
Sbjct: 251 TYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM 310
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
++K + PD TYN + +D+ +K +DEM+ G D V Y L++ Y
Sbjct: 311 EKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMT-KRGIQPDLVTYNTLISGY 364
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 114/278 (41%), Gaps = 15/278 (5%)
Query: 17 RIDLMTKVFG--IHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSN 74
R+D KVF + GE E + Y AL+ Y + A +R+ +
Sbjct: 123 RVDEAVKVFDEMLTKGEVKPEAV--------MYNALIGGYCDQGKLDTALLYRDRMVERG 174
Query: 75 LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVK 134
++ YN ++ G+ + +VEE+ K + PD+FTYN+ I+ N+ +
Sbjct: 175 VAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKAL 234
Query: 135 KFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLV-EAEKSITQRQWITYDFLI 193
+ + MS G V Y +L IY + E+ L EA + + + Y+ LI
Sbjct: 235 EIFENMS-RRGVRATVVTYTSL--IYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALI 291
Query: 194 ILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATS 253
++ GN D+ +I + + Y ++ +LG + E ++ID+ +
Sbjct: 292 NSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQ 351
Query: 254 DFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 291
D+ N L+ +S G + A ++ K PT
Sbjct: 352 P-DLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPT 388
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 120/294 (40%), Gaps = 45/294 (15%)
Query: 37 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 96
LPL + T+ +L A +A EL ++ + N A+ YN ++ + S G+V+
Sbjct: 37 LPLC---TTTFNIMLRHLCSAGKPARALELLRQMPRPN----AVTYNTVIAGFCSRGRVQ 89
Query: 97 KVALVVEEIK-RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM--------------- 140
++ E++ R + P+ +TY IS +D+ K DEM
Sbjct: 90 AALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNA 149
Query: 141 ----SCDSGGSDDWVKYVN------LVNIYITASHLVNA--------ESSTLVE--AEKS 180
CD G D + Y + + T + LV+A E+ LVE K
Sbjct: 150 LIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKG 209
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 240
+ TY+ LI + GN K +I++++ + T Y ++ + G ++E
Sbjct: 210 LAP-DVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQET 268
Query: 241 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
++ D+ + D+ N L+ + S G ++A E + +K AP + +
Sbjct: 269 DKLFDEAVRRGIRP-DLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVT 321
>gi|449461223|ref|XP_004148341.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Cucumis sativus]
gi|449507064|ref|XP_004162923.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Cucumis sativus]
Length = 844
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 115/241 (47%), Gaps = 9/241 (3%)
Query: 18 IDLMTKVFGIHS----GERYFEGLPLSAKTSETY--TALLHLYAGAKWTEKAEELFERVK 71
++LM ++ G S + + +P+ + + T +LH Y+ ++A +FER+K
Sbjct: 200 VELMIRILGRESKYSIALKLLDKIPIDKYSLDVRACTTILHAYSRNGKYKQAIAMFERMK 259
Query: 72 QSNLSFNALMYNEMMTLYMSVGQV-EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 130
LS + + YN M+ +Y +G+ +K+ +++E++ + + D FT + IS+C I
Sbjct: 260 DCGLSPSLVTYNVMLDVYGKMGRSWDKILDLLDEMRNEGLQFDEFTCSTVISACGREGLI 319
Query: 131 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 190
++ K+F E+ SG V Y L+ ++ A + + + L E E + +TY+
Sbjct: 320 NEAKEFFVELK-SSGYEPGTVTYNALLQVFGKAG-IYSEALNILKEMEDNNCTLDSVTYN 377
Query: 191 FLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQS 250
L+ Y G ++ + ++ + Y ++++Y G + ++ +Q K+S
Sbjct: 378 ELVAAYVRAGFYEEGATVIDTMTRKGVMPNAVTYTTVINAYGRAGKEVKALQLFNQMKKS 437
Query: 251 A 251
Sbjct: 438 G 438
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 55/100 (55%), Gaps = 3/100 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY +L+++YA KAEE+ + + +S S + + YN ++ + G +++ V+ E+
Sbjct: 690 TYNSLMNMYARRGECWKAEEILKGLIKSGESPDLVSYNTIIKGFCRQGLMQEAIRVMSEM 749
Query: 106 KRKNVVPDIFTYNLWISSCAAT---LNIDQVKKFLDEMSC 142
+ + P IFTYN ++S A +D+V ++ + +C
Sbjct: 750 TTRGICPCIFTYNTFVSGYAGRGMFAEVDEVISYMIQKNC 789
Score = 44.3 bits (103), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 25/121 (20%), Positives = 58/121 (47%), Gaps = 2/121 (1%)
Query: 23 KVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 80
K + ER FE L + + + ++L ++A E+A+++ + +++S L + +
Sbjct: 630 KCRAVRGMERAFEELMKNGYKPDMVIFNSMLSIFAKNNMYERAQKMLDLIRESGLQPDLV 689
Query: 81 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
YN +M +Y G+ K +++ + + PD+ +YN I + + + + EM
Sbjct: 690 TYNSLMNMYARRGECWKAEEILKGLIKSGESPDLVSYNTIIKGFCRQGLMQEAIRVMSEM 749
Query: 141 S 141
+
Sbjct: 750 T 750
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 48/249 (19%), Positives = 103/249 (41%), Gaps = 11/249 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY ALL+ A + AE + ++ N ++ M+ Y G V + + ++I
Sbjct: 550 TYNALLNALARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYAKGGNVRGLERIGKDI 609
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ P I + + +++ +E+ +G D V + ++++I+ ++
Sbjct: 610 YDGQIFPSWVLLRTLILANFKCRAVRGMERAFEELM-KNGYKPDMVIFNSMLSIF-AKNN 667
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ L +S Q +TY+ L+ +YA G K ++I K L + + +Y
Sbjct: 668 MYERAQKMLDLIRESGLQPDLVTYNSLMNMYARRGECWKAEEILKGLIKSGESPDLVSYN 727
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC----NRLLGAFSDVGLTEKANEFHM 281
I+ + G ++E ++ + I C N + ++ G+ + +E
Sbjct: 728 TIIKGFCRQGLMQEAIRVMSEMTTRG-----ICPCIFTYNTFVSGYAGRGMFAEVDEVIS 782
Query: 282 LLLQKNCAP 290
++QKNC P
Sbjct: 783 YMIQKNCKP 791
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 41/80 (51%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT +++ Y A KA +LF ++K+S N YN ++ L + E++ ++ ++
Sbjct: 410 TYTTVINAYGRAGKEVKALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKILSDM 469
Query: 106 KRKNVVPDIFTYNLWISSCA 125
+ P+ T+N ++ C
Sbjct: 470 RINGCPPNRITWNTLLAMCG 489
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 46/97 (47%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
S TY L+ Y A + E+ + + + + + NA+ Y ++ Y G+ K +
Sbjct: 373 SVTYNELVAAYVRAGFYEEGATVIDTMTRKGVMPNAVTYTTVINAYGRAGKEVKALQLFN 432
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
++K+ VP++ TYN ++ +++ K L +M
Sbjct: 433 QMKKSGCVPNVCTYNSILALLGKKSRSEEMIKILSDM 469
>gi|295828266|gb|ADG37802.1| AT1G07590-like protein [Capsella grandiflora]
Length = 194
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 3/164 (1%)
Query: 80 LMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE 139
L+YN ++ + G+ + +A + +K +P + TY++ + A NID V K D
Sbjct: 20 LVYNRLIIRNSAPGRRKLIAKDLALMKADKAIPHVSTYHILMKLEANXHNIDGVLKAFDG 79
Query: 140 MSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGL 199
M +G + V Y + A AE+ T EKS+T W T D L+ILY L
Sbjct: 80 MK-KAGVEPNEVSYCIXAMAHAVARLYTVAEAYT-EXIEKSVTGDNWSTLDILMILYGRL 137
Query: 200 GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI 243
G + ++ + W +R + S++Y+ ++ +G+L E+
Sbjct: 138 GKEKELARTWNVIRGF-HHVRSKSYLLATEAFARVGNLDRAEEL 180
>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
Length = 567
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/252 (19%), Positives = 105/252 (41%), Gaps = 6/252 (2%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 102
T TYT ++ A+ T A +L + ++ S N YN ++ ++++ ++
Sbjct: 111 TVVTYTNIVDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKML 170
Query: 103 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 162
EE+ + PD+ TYN +I +D+ +KFL M + D V Y ++N
Sbjct: 171 EEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPV----TPDVVSYTTVINGLCK 226
Query: 163 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 222
+ L ++ S L +TY LI + G ++ + S+ +
Sbjct: 227 SGDL-DSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMV 285
Query: 223 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 282
Y +L + LGH+ + +++ + ++ + D+ + N + +KA
Sbjct: 286 AYNSLLGALHRLGHIGKAEDMLVEMERRGFTP-DVVSYNACIDGLCKAERVKKAKAVFDR 344
Query: 283 LLQKNCAPTNAS 294
++++ C P +S
Sbjct: 345 MVERGCTPNASS 356
Score = 43.9 bits (102), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 103/276 (37%), Gaps = 33/276 (11%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY LL +KA +F+ + + +A + ++ Q+EK ++ +
Sbjct: 9 TYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLLGRM 68
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS------------------CDSGGS 147
K VPD YN IS + + Q KFL EM C + +
Sbjct: 69 KEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERT 128
Query: 148 DDWVKYVNLV-------NIYITASHLVNA--ESSTLVEAEKSITQRQWITYDFLIILY-- 196
D VK ++ + NIY T + +V E L EA+K + + Y ++ Y
Sbjct: 129 RDAVKLLDEMRDKGCSPNIY-TYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNS 187
Query: 197 --AGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSD 254
GL D++D+ K L +Y +++ G L ++D +
Sbjct: 188 FIKGLCKCDRVDEARKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTP 247
Query: 255 FDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
D+ + L+ F G E+A +L+ C P
Sbjct: 248 -DVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRP 282
>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
Length = 850
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/268 (20%), Positives = 118/268 (44%), Gaps = 17/268 (6%)
Query: 31 ERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTL 88
ER F+ +P + +++AL+ L + ++A + F +K + L+ + ++Y ++
Sbjct: 483 ERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGG 542
Query: 89 YMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSD 148
+ G + + V +E+ + D+ TYN ++ + + + EM+ + G
Sbjct: 543 FCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMT-ERGVFP 601
Query: 149 DWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQW----ITYDFLIILYAGLGNKDK 204
D+ + L+N Y ++ A TL E + QR +TY+ LI + +K
Sbjct: 602 DFYTFTTLINGYXKDGNMNKA--VTLFEM---MIQRNLKPDVVTYNTLIDGFCKGSEMEK 656
Query: 205 IDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFD--ISACNR 262
++++W + + +Y +++ Y +G + E + W + F+ I CN
Sbjct: 657 VNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRL---WDEMVEKGFEATIITCNT 713
Query: 263 LLGAFSDVGLTEKANEFHMLLLQKNCAP 290
++ + G KA+EF +L K P
Sbjct: 714 IVKGYCRAGNAVKADEFLSNMLLKGIVP 741
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 50/114 (43%), Gaps = 1/114 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L++ Y E+A EL + + L YN ++ G+ + V++E+
Sbjct: 395 TYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEM 454
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 159
+ + PD TYN+ + C N+ ++ DEM G D V + L+ +
Sbjct: 455 LKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMP-SQGVVPDLVSFSALIGL 507
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 45/249 (18%), Positives = 104/249 (41%), Gaps = 3/249 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY +L+ K +A+ELF + + + + + ++ Y G + K + E +
Sbjct: 570 TYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMM 629
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
++N+ PD+ TYN I +++V + ++M + + Y L+N Y
Sbjct: 630 IQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDM-ISRRIYPNHISYGILINGYCNMGC 688
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ A EK + IT + ++ Y GN K D+ ++ + Y
Sbjct: 689 VSEAFRLWDEMVEKGF-EATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYN 747
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 285
+++ ++ ++ ++++ + S D+ N +L FS G ++A + +++
Sbjct: 748 TLINGFIKEENMDRAFALVNKMENSGLLP-DVITYNVILNGFSRQGRMQEAELIMLKMIE 806
Query: 286 KNCAPTNAS 294
+ P ++
Sbjct: 807 RGVNPDRST 815
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 52/114 (45%), Gaps = 1/114 (0%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
+ L+ Y A+ + E F +K L + N ++ + VG V+ + +E+
Sbjct: 291 FDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVV 350
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
R V +++T N+ I++ I+ K FL +M + G D V Y L+N Y
Sbjct: 351 RSGVQVNVYTLNIMINALCKNQKIENTKSFLSDME-EKGVFPDVVTYNTLINAY 403
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 44/93 (47%)
Query: 49 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 108
+LL W + A E+++ V +S + N N M+ ++E + +++ K
Sbjct: 328 SLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEK 387
Query: 109 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 141
V PD+ TYN I++ +++ + +D MS
Sbjct: 388 GVFPDVVTYNTLINAYCRQGLLEEAFELMDSMS 420
>gi|357124917|ref|XP_003564143.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Brachypodium distachyon]
Length = 1285
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 92/209 (44%), Gaps = 12/209 (5%)
Query: 34 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNL-----SFNALMYNEMMTL 88
F LP T + + A++ +YA + + +L + ++ L SFN L+ +
Sbjct: 55 FPHLP--GATVQVFNAMMGVYARSGRFDDVRQLLDAMRGQELEPDLVSFNTLINARAKSG 112
Query: 89 YMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSD 148
++ G + L E+++ + PD+ TYN IS+C+ N+D +EM D
Sbjct: 113 CLAPGSAFDLLL---EVRQVGLRPDVITYNTLISACSQGSNLDDAVAVFEEMMASECRPD 169
Query: 149 DWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQI 208
W Y +V+++ +AE EK + +TY+ L+ +A G+ D ++++
Sbjct: 170 LWT-YNAMVSVHGRCGKAQDAERMFRELVEKGF-KPDAVTYNSLLYAFAKEGDADTVERV 227
Query: 209 WKSLRMTKQKMTSRNYICILSSYLMLGHL 237
+ L K Y ++ Y +G L
Sbjct: 228 CEELVRAGFKKDGITYNTMIHMYGKMGRL 256
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 80/195 (41%), Gaps = 2/195 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY A++ ++ + AE +F + + +A+ YN ++ + G + V V EE+
Sbjct: 172 TYNAMVSVHGRCGKAQDAERMFRELVEKGFKPDAVTYNSLLYAFAKEGDADTVERVCEEL 231
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
R D TYN I +D DEM G + D V Y L++
Sbjct: 232 VRAGFKKDGITYNTMIHMYGKMGRLDLALGLYDEMRA-LGCTPDAVTYTVLIDSLGKMDR 290
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ +A L E + + +T+ LI YA G +++ + + + + K Y+
Sbjct: 291 ISDA-GKVLEEMADAGLKPTLVTFSALICAYAKGGRREEAVRTFSHMVASGVKPDRLAYL 349
Query: 226 CILSSYLMLGHLKEV 240
+L G ++++
Sbjct: 350 VMLDIIARSGDMRKL 364
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
E+Y +LL AK E+AE+LFE ++ N +Y+ +M +Y K ++
Sbjct: 835 ESYKSLLAASGKAKLWEQAEQLFEEIRSKGYRLNRSLYHMLMKIYRDACNHSKAEQLLAS 894
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS 144
+K + P I T ++ ++S + D+ +K L+ + S
Sbjct: 895 MKEDGIEPTIATMHILMTSYGTAGHPDEAEKVLNSLKSSS 934
Score = 44.3 bits (103), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 86/186 (46%), Gaps = 2/186 (1%)
Query: 50 LLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKN 109
LL +Y G +K E++ + ++ L N YN ++ +Y + E+ ++ E+ +K
Sbjct: 770 LLLMYTGNGNFDKTVEVYHSILEAGLEPNEDTYNTLIVMYSRNLRPEEGFTLLNEMGKKG 829
Query: 110 VVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 169
+ P + +Y +++ +Q ++ +E+ G + Y L+ IY A + A
Sbjct: 830 LTPKLESYKSLLAASGKAKLWEQAEQLFEEIR-SKGYRLNRSLYHMLMKIYRDACNHSKA 888
Query: 170 ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILS 229
E L ++ + T L+ Y G+ D+ +++ SL+ + ++++ Y + +
Sbjct: 889 E-QLLASMKEDGIEPTIATMHILMTSYGTAGHPDEAEKVLNSLKSSSLEVSTLPYSTVFN 947
Query: 230 SYLMLG 235
+YL G
Sbjct: 948 AYLKNG 953
Score = 37.4 bits (85), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 97/248 (39%), Gaps = 6/248 (2%)
Query: 7 FVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAE 64
F +S S +D TK I + + G+ + Y +++ L K E
Sbjct: 690 FKISKSTVILMLDAFTKAGDIFEVMKIYNGMKEAGYLPNMHIYRSMISLLCRNKRYRDVE 749
Query: 65 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 124
+ ++++ + + N ++ +Y G +K V I + P+ TYN I
Sbjct: 750 LMVVEMERAGFEPDLTILNTLLLMYTGNGNFDKTVEVYHSILEAGLEPNEDTYNTLIVMY 809
Query: 125 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR 184
+ L ++ L+EM G + Y +L+ A AE L E +S R
Sbjct: 810 SRNLRPEEGFTLLNEMG-KKGLTPKLESYKSLLAASGKAKLWEQAEQ--LFEEIRSKGYR 866
Query: 185 -QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI 243
Y L+ +Y N K +Q+ S++ + T +++SY GH E ++
Sbjct: 867 LNRSLYHMLMKIYRDACNHSKAEQLLASMKEDGIEPTIATMHILMTSYGTAGHPDEAEKV 926
Query: 244 IDQWKQSA 251
++ K S+
Sbjct: 927 LNSLKSSS 934
>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 915
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 109/275 (39%), Gaps = 41/275 (14%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT+++ +K E+A +LF+ ++Q ++ N +MY ++ Y G+V + L++E++
Sbjct: 499 TYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKM 558
Query: 106 KRKNVVPDIFTYNLWISS-CA--------------------ATLNIDQV----------- 133
KN +P+ T+N I C T++ D +
Sbjct: 559 LSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDF 618
Query: 134 ----KKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITY 189
++F +S SG D Y + Y L +AE E ++ TY
Sbjct: 619 DHAYRRFQQMLS--SGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSP-DLFTY 675
Query: 190 DFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQ 249
LI Y LG + + K + T + + ++ ++ L + + K G
Sbjct: 676 SSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVM 735
Query: 250 SATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 284
S +FDI LL + G+T A + L+L
Sbjct: 736 SNMMEFDIVV--ELLEKMVEHGVTPNAKSYEKLML 768
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 94/244 (38%), Gaps = 3/244 (1%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y LL+ A ++ ++++ + + + N YN+M+ Y VG VE+ V I
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIV 245
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
+ PD FTY I ++D K EM G + V Y +L++ +
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPL-KGCRRNEVAYTHLIH-GLCVERR 303
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 226
++ V+ + TY LI G K + + K + K Y
Sbjct: 304 IDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTV 363
Query: 227 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 286
++ S L++ E++ Q + ++ N L+ + G+ E A + L+ +
Sbjct: 364 LIDSLCSQCKLEKARELLGQMLEKGLMP-NVITYNALINGYCKRGMIEDALDVVELMESR 422
Query: 287 NCAP 290
N P
Sbjct: 423 NLRP 426
Score = 44.7 bits (104), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 110/293 (37%), Gaps = 53/293 (18%)
Query: 11 DSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--------TYTALLHLYAGAKWTEK 62
D Y T + + ER E L L + E TYT L+ EK
Sbjct: 317 DDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEK 376
Query: 63 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 122
A EL ++ + L N + YN ++ Y G +E VVE ++ +N+ P+ TYN I
Sbjct: 377 ARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIK 436
Query: 123 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT 182
N+ + L++M + D V Y +L++ + + +A + ++ +
Sbjct: 437 G-YCKRNVHKAMGVLNKM-LERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLV 494
Query: 183 QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 242
W TY + ID + KS R ++E +
Sbjct: 495 PDPW-TYTSM------------IDSLCKSKR-----------------------VEEACD 518
Query: 243 IIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL---LQKNCAPTN 292
+ D +Q ++ L+ + G K NE H++L L KNC P +
Sbjct: 519 LFDSLEQKDVIP-NVVMYTALIDGYCKAG---KVNEAHLMLEKMLSKNCLPNS 567
>gi|302771513|ref|XP_002969175.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
gi|300163680|gb|EFJ30291.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
Length = 399
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 107/250 (42%), Gaps = 13/250 (5%)
Query: 46 TYTALLHLYAGAKWTEKAEELF-ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
TY L+ + A + A +L E +Q ++ MYN + G+V + VV+
Sbjct: 20 TYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKN 79
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+K PD+ T+N I+ +D+ ++ LDEM SG + + V Y L+N +A
Sbjct: 80 MKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEME-RSGFAANLVTYNTLINGLSSAG 138
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR-- 222
+ E+ +++ + Q TY+ +I G +ID+ + L KQ+
Sbjct: 139 R--SGEAVLVMQGMTTTPDTQ--TYNAII---HGFCKSGEIDRAYGFLEEMKQRAGCSPD 191
Query: 223 --NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 280
Y +++ +L++ E++ + + A N L+ + ++A E
Sbjct: 192 TFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELL 251
Query: 281 MLLLQKNCAP 290
+L+ CAP
Sbjct: 252 SSMLEHGCAP 261
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 68/162 (41%), Gaps = 6/162 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELF-ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
TY+ L++ + KA+EL E + + + + + +N ++ Y +++ ++
Sbjct: 194 TYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSS 253
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+ PD+ TY+ I ++D+ L++M G D V Y LV A
Sbjct: 254 MLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMV-SRGCKPDVVTYTVLVTGLCKAG 312
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKID 206
+V A E T +TY +++ GL DK+D
Sbjct: 313 KMVEACRLVKRMLEDGCTP-NAVTYS---LVFDGLCKIDKLD 350
>gi|302797108|ref|XP_002980315.1| hypothetical protein SELMODRAFT_444519 [Selaginella moellendorffii]
gi|300151931|gb|EFJ18575.1| hypothetical protein SELMODRAFT_444519 [Selaginella moellendorffii]
Length = 2030
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 70/136 (51%), Gaps = 6/136 (4%)
Query: 36 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 95
G+P S S TY L+H+YA A+ ++ A EL+ +S L N ++YN ++ Y S G
Sbjct: 1655 GIPFS---SATYAILIHMYAKARDSKAAAELYADYLRSGLEPNLIVYNNVILSYGSSGFP 1711
Query: 96 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 155
++ +I++ + PD FTY ISS A + Q +++ ++ G ++ N
Sbjct: 1712 GHAQNILGDIRKAGLAPDRFTYCTLISSWARAGAMLQARRWFNKACKTKAGPS--IEMCN 1769
Query: 156 -LVNIYITASHLVNAE 170
L++ Y+ A + A+
Sbjct: 1770 ALIDGYLKAREVEPAK 1785
>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
Length = 583
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 106/249 (42%), Gaps = 3/249 (1%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
TY L++ + E AE L ++ + N +++N M+ Y G V+ +
Sbjct: 318 RTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAA 377
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+++ V DI+TYN +D+ K L M + G ++V Y L++I+
Sbjct: 378 MEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIM-IEMGVVPNYVTYTTLISIHCKDG 436
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
+V A AEK T +TY+ +I Y G+ + ++ K + Y
Sbjct: 437 DMVEARRLFREMAEKGATP-SVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTY 495
Query: 225 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 284
++ + + G + ++ ++ KQ T + ++ A L+ + G +E A + + +L
Sbjct: 496 ASLVHGHCVNGKVDVALKLFEEMKQRGT-EPNVVAYTALISGLAKEGRSEAAFQLYDDML 554
Query: 285 QKNCAPTNA 293
+ P ++
Sbjct: 555 KAGLIPDDS 563
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 31/153 (20%), Positives = 72/153 (47%), Gaps = 2/153 (1%)
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
+ A L + + + +S NAL YN ++ Y+ +V ++E ++ + + + TY +
Sbjct: 194 DDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMENEGIEATVGTYTIL 253
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
+ S + +I +V+ +EM ++ D ++ Y ++N Y A ++ A + L E +
Sbjct: 254 VDSLSTARDISKVEALFNEMKANNVVGDVYL-YTAVINAYCRAGNMRRA-AKVLDECVGN 311
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 213
+ TY LI + +G + + + ++
Sbjct: 312 GVEPNERTYGVLINGFCKIGQMEAAEMLLADMQ 344
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 64/155 (41%), Gaps = 3/155 (1%)
Query: 18 IDLMTKVFGIHSGERYFEGLPLSAKT--SETYTALLHLYAGAKWTEKAEELFERVKQSNL 75
+D + K + R + +P + + Y +LL Y K + +E+ E ++ +
Sbjct: 184 VDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMENEGI 243
Query: 76 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKK 135
Y ++ + + KV + E+K NVV D++ Y I++ N+ + K
Sbjct: 244 EATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRRAAK 303
Query: 136 FLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAE 170
LDE +G + Y L+N + + AE
Sbjct: 304 VLDE-CVGNGVEPNERTYGVLINGFCKIGQMEAAE 337
>gi|302759176|ref|XP_002963011.1| hypothetical protein SELMODRAFT_438275 [Selaginella moellendorffii]
gi|300169872|gb|EFJ36474.1| hypothetical protein SELMODRAFT_438275 [Selaginella moellendorffii]
Length = 2074
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 70/136 (51%), Gaps = 6/136 (4%)
Query: 36 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 95
G+P S S TY L+H+YA A+ ++ A EL+ +S L N ++YN ++ Y S G
Sbjct: 1699 GIPFS---SATYAILIHMYAKARDSKAAAELYADYLRSGLEPNLIVYNNVILSYGSSGFP 1755
Query: 96 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 155
++ +I++ + PD FTY ISS A + Q +++ ++ G ++ N
Sbjct: 1756 GHAQNILGDIRKAGLAPDRFTYCTLISSWARAGAMLQARRWFNKACKTKAGPS--IEMCN 1813
Query: 156 -LVNIYITASHLVNAE 170
L++ Y+ A + A+
Sbjct: 1814 ALIDGYLKAREVEPAK 1829
>gi|302797110|ref|XP_002980316.1| hypothetical protein SELMODRAFT_420032 [Selaginella moellendorffii]
gi|300151932|gb|EFJ18576.1| hypothetical protein SELMODRAFT_420032 [Selaginella moellendorffii]
Length = 1527
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 70/136 (51%), Gaps = 6/136 (4%)
Query: 36 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 95
G+P S S TY L+H+YA A+ ++ A EL+ +S L N ++YN ++ Y S G
Sbjct: 1148 GIPFS---SATYAILIHMYAKARDSKAAAELYADYLRSGLEPNLIVYNNVILSYGSSGFP 1204
Query: 96 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 155
++ +I++ + PD FTY ISS A + Q +++ ++ G ++ N
Sbjct: 1205 GHAQNILGDIRKAGLAPDRFTYCTLISSWARAGAMLQARRWFNKACKTKAGPS--IEMCN 1262
Query: 156 -LVNIYITASHLVNAE 170
L++ Y+ A + A+
Sbjct: 1263 ALIDGYLKAREVEPAK 1278
>gi|356558071|ref|XP_003547332.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Glycine max]
Length = 647
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 76/158 (48%), Gaps = 6/158 (3%)
Query: 53 LYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVP 112
L + K TE A +L ++ + ++ + +MYN + T + Q+ + + E++K+ P
Sbjct: 413 LCSAGKMTE-AIDLLNKIHEKGITTDTIMYNTVFTALGRLKQISHIHDLYEKMKQDGPPP 471
Query: 113 DIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESS 172
DIFTYN+ ISS +D KF +E+ +S D + Y +L+N + + V+
Sbjct: 472 DIFTYNILISSFGRAGRVDIAVKFFEELE-NSDCKPDVISYNSLINC-LGKNGDVDEAHM 529
Query: 173 TLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK 210
E ++ +TY LI + G DK++ +
Sbjct: 530 RFKEMQEKGLNPDVVTYSTLIECF---GKTDKVEMACR 564
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 53/114 (46%), Gaps = 5/114 (4%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
+TAL L K +L+E++KQ + YN +++ + G+V+ EE++
Sbjct: 445 FTALGRL----KQISHIHDLYEKMKQDGPPPDIFTYNILISSFGRAGRVDIAVKFFEELE 500
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
+ PD+ +YN I+ ++D+ EM + G + D V Y L+ +
Sbjct: 501 NSDCKPDVISYNSLINCLGKNGDVDEAHMRFKEMQ-EKGLNPDVVTYSTLIECF 553
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 46/95 (48%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L+ + A + A + FE ++ S+ + + YN ++ G V++ + +E+
Sbjct: 475 TYNILISSFGRAGRVDIAVKFFEELENSDCKPDVISYNSLINCLGKNGDVDEAHMRFKEM 534
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
+ K + PD+ TY+ I T ++ + DEM
Sbjct: 535 QEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEM 569
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 94/229 (41%), Gaps = 13/229 (5%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVA--LVVE 103
TY LL Y A + A ++ + + + YN ++ ++ + EKV V E
Sbjct: 199 TYKCLLQAYLRALDSSTAFRVYLDMIRHGYRLDIFGYNMLLD---ALAKDEKVCSYKVFE 255
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
++KR++ PD+FTY + I + D+ M G + + + Y ++ +
Sbjct: 256 DMKRRHCEPDVFTYTIMIRMTGKSSKTDEALALFQAMLA-KGCTPNLIGYNTMIEA-LAK 313
Query: 164 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 223
+V+ + ++ Q TY ++ L G +K+D I + ++K+ + +
Sbjct: 314 GRMVDKAVLLFSKMVENDIQPNEFTYSVILNLLVAEGKLNKLDNI---VDISKKYINKQI 370
Query: 224 YICILSSYLMLGHLKEVGEII-DQWKQSATSDFDISACNRLLGAFSDVG 271
Y + + +GH E + + W D D AC +L + G
Sbjct: 371 YAYFVRTLSKVGHASEAHRLFCNMWNFHDKGDKD--ACMSMLESLCSAG 417
Score = 40.8 bits (94), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 109/262 (41%), Gaps = 40/262 (15%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT ++ + + T++A LF+ + + N + YN M+ V+K L+ ++
Sbjct: 268 TYTIMIRMTGKSSKTDEALALFQAMLAKGCTPNLIGYNTMIEALAKGRMVDKAVLLFSKM 327
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
++ P+ FTY++ ++ A ++++ +D KY+N IY ++
Sbjct: 328 VENDIQPNEFTYSVILNLLVAEGKLNKLDNIVDISK----------KYIN-KQIY---AY 373
Query: 166 LVNAESSTLVEAE-KSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL----RMTK---- 216
V S +E + W +D G+KD + +SL +MT+
Sbjct: 374 FVRTLSKVGHASEAHRLFCNMWNFHD--------KGDKDACMSMLESLCSAGKMTEAIDL 425
Query: 217 -----QKMTSRNYICILSSYLMLGHLKEVGEIIDQW---KQSATSDFDISACNRLLGAFS 268
+K + + I + + LG LK++ I D + KQ DI N L+ +F
Sbjct: 426 LNKIHEKGITTDTIMYNTVFTALGRLKQISHIHDLYEKMKQDGPPP-DIFTYNILISSFG 484
Query: 269 DVGLTEKANEFHMLLLQKNCAP 290
G + A +F L +C P
Sbjct: 485 RAGRVDIAVKFFEELENSDCKP 506
>gi|356540307|ref|XP_003538631.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Glycine max]
Length = 804
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 3/155 (1%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV-EKVALVVEEI 105
YT L++ Y+ + A LF +++Q + + YN ++ +Y +G V +VE +
Sbjct: 196 YTCLINAYSSSGRYRDAVNLFNKMQQDGCNPTLITYNVVLNVYGKMGMPWSNVTALVEAM 255
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ + V PD++TYN IS C ++ +M + G + D V Y L++++ S
Sbjct: 256 RSRGVAPDLYTYNTLISCCRRGSLYEEAVHLFQQMKLE-GFTPDKVTYNALLDVF-GKSR 313
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 200
L E E + +TY+ LI YA G
Sbjct: 314 RPQEAMKVLQEMEANGFSPTSVTYNSLISAYAKGG 348
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 51/81 (62%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY +L+++Y+ ++ +K+EE+ V + + + + YN ++ Y G++++ + + E+
Sbjct: 651 TYNSLMYMYSRSENFQKSEEILREVLEKGMKPDRISYNTVIYAYCRNGRMKEASRIFSEM 710
Query: 106 KRKNVVPDIFTYNLWISSCAA 126
K +VPD+ TYN +I++ AA
Sbjct: 711 KDSALVPDVVTYNTFIATYAA 731
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/264 (18%), Positives = 111/264 (42%), Gaps = 7/264 (2%)
Query: 34 FEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMS 91
F+ + L T + TY ALL ++ ++ ++A ++ + ++ + S ++ YN +++ Y
Sbjct: 287 FQQMKLEGFTPDKVTYNALLDVFGKSRRPQEAMKVLQEMEANGFSPTSVTYNSLISAYAK 346
Query: 92 VGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWV 151
G +E+ + ++ K + PD+FTY +S D + EM G +
Sbjct: 347 GGLLEEALDLKTQMVHKGIKPDVFTYTTLLSGFEKAGKDDFAIQVFLEMRA-VGCKPNIC 405
Query: 152 KYVNLVNIYITASHLVNAESSTLVEAEKSIT-QRQWITYDFLIILYAGLGNKDKIDQIWK 210
+ L+ ++ AE + + K +T++ L+ ++ G ++ I+K
Sbjct: 406 TFNALIKMHGNRGKF--AEMMKVFDDIKLCNCSPDIVTWNTLLAVFGQNGMDSQVSGIFK 463
Query: 211 SLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDV 270
++ + ++S+Y G + + ++ D+S N +L A +
Sbjct: 464 EMKRAGFVAERDTFNTLISAYSRCGSFDQAMAVYKSMLEAGVVP-DLSTYNAVLAALARG 522
Query: 271 GLTEKANEFHMLLLQKNCAPTNAS 294
GL E++ + + C P S
Sbjct: 523 GLWEQSEKVLAEMEDGRCKPNELS 546
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 57/314 (18%), Positives = 117/314 (37%), Gaps = 71/314 (22%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+ LL ++ + +F+ +K++ +N +++ Y G ++ V + +
Sbjct: 441 TWNTLLAVFGQNGMDSQVSGIFKEMKRAGFVAERDTFNTLISAYSRCGSFDQAMAVYKSM 500
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
VVPD+ TYN +++ A +Q +K L EM D + + Y +L++ Y
Sbjct: 501 LEAGVVPDLSTYNAVLAALARGGLWEQSEKVLAEME-DGRCKPNELSYSSLLHAYANGKE 559
Query: 166 ---------------------------LVNAESSTLVEAEKSITQ--RQWI--------- 187
LVN++S L+E E++ + R+ I
Sbjct: 560 IERMNAFAEEIYSGSVETHAVLLKTLVLVNSKSDLLIETERAFLELRRRGISPDITTLNA 619
Query: 188 -------------------------------TYDFLIILYAGLGNKDKIDQIWKSLRMTK 216
TY+ L+ +Y+ N K ++I + +
Sbjct: 620 MLSIYGRKQMVAKAHEILNFMHETRFTPSLTTYNSLMYMYSRSENFQKSEEILREVLEKG 679
Query: 217 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
K +Y ++ +Y G +KE I + K SA D+ N + ++ + +A
Sbjct: 680 MKPDRISYNTVIYAYCRNGRMKEASRIFSEMKDSALVP-DVVTYNTFIATYAADSMFAEA 738
Query: 277 NEFHMLLLQKNCAP 290
+ ++++ C P
Sbjct: 739 IDVVRYMIKQGCKP 752
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 67/152 (44%), Gaps = 2/152 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+ AL+ ++ + ++F+ +K N S + + +N ++ ++ G +V+ + +E+
Sbjct: 406 TFNALIKMHGNRGKFAEMMKVFDDIKLCNCSPDIVTWNTLLAVFGQNGMDSQVSGIFKEM 465
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
KR V + T+N IS+ + + DQ M ++G D Y N V +
Sbjct: 466 KRAGFVAERDTFNTLISAYSRCGSFDQAMAVYKSM-LEAGVVPDLSTY-NAVLAALARGG 523
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYA 197
L L E E + ++Y L+ YA
Sbjct: 524 LWEQSEKVLAEMEDGRCKPNELSYSSLLHAYA 555
>gi|452825793|gb|EME32788.1| mitochondrial protein translocase, MPT family [Galdieria
sulphuraria]
Length = 821
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 50/95 (52%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L+ ++ E+A +LF+ +K++N+ N Y+ +++ + G VE+ + EE+
Sbjct: 425 TYATLIDAFSKRMEPERALKLFQEMKEANVKPNNYCYSSLISAFCRAGYVERALAIFEEM 484
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
+ +VPD+F +N I +D+ + D M
Sbjct: 485 THERIVPDVFAFNALIDGFGKLRQVDKAFEIYDRM 519
>gi|449444598|ref|XP_004140061.1| PREDICTED: pentatricopeptide repeat-containing protein At5g27270-like
[Cucumis sativus]
Length = 1062
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 110/252 (43%), Gaps = 10/252 (3%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGL-PLSAKTS-ETYTALLHLYAGAKWTEKAEELFERVK 71
+ T I M + +H R +E + L S +TY ++ +Y + +KA E+F +
Sbjct: 776 FNTFIKAMLEGGKLHFASRIYEHMIALGIVPSIQTYNTMISVYGRGRKLDKAVEMFNAAR 835
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
S LS + Y +++ Y G+ + +L+ +E+ + V P + +YN+ ++ A +
Sbjct: 836 SSGLSPDEKAYTNLISCYGKAGKTHEASLLFKEMLEEGVKPGMVSYNIMVNVYANAGLHE 895
Query: 132 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 191
+ + L M D+ D + Y +L+ Y + AE EK I YD
Sbjct: 896 ETENLLKAMEQDAIVPDSFT-YFSLIRAYTQSCKYSEAEKIINSMQEKGIPT-TCAHYDL 953
Query: 192 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC---ILSSYLMLGHLKEVGEIIDQWK 248
L+ A G K ++++ L+ S + C ++ YL G+++E + +
Sbjct: 954 LLSALAKAGMIRKAERVYDELQTAG---LSPDVTCNRTLMRGYLDYGYVREGIKFFESTC 1010
Query: 249 QSATSDFDISAC 260
+ A F +SA
Sbjct: 1011 KYAGDRFIMSAA 1022
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 95/232 (40%), Gaps = 11/232 (4%)
Query: 63 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 122
AE + L + + +N + + G++ + + E + +VP I TYN IS
Sbjct: 757 AENVVRASLNCGLELDTVAFNTFIKAMLEGGKLHFASRIYEHMIALGIVPSIQTYNTMIS 816
Query: 123 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLV-EAEKSI 181
+D+ + + + SG S D Y NL++ Y A E+S L E +
Sbjct: 817 VYGRGRKLDKAVEMFN-AARSSGLSPDEKAYTNLISCYGKAGK--THEASLLFKEMLEEG 873
Query: 182 TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVG 241
+ ++Y+ ++ +YA G ++ + + K++ S Y ++ +Y E
Sbjct: 874 VKPGMVSYNIMVNVYANAGLHEETENLLKAMEQDAIVPDSFTYFSLIRAYTQSCKYSEAE 933
Query: 242 EIIDQWKQSATSDFDISAC---NRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
+II+ ++ + C + LL A + G+ KA + L +P
Sbjct: 934 KIINSMQEKGIP----TTCAHYDLLLSALAKAGMIRKAERVYDELQTAGLSP 981
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 78/189 (41%), Gaps = 6/189 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
YT +L Y + AEE F + + L + + M+ Y G + + +
Sbjct: 191 VYTIVLRAYGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHHKTMLSFYSAV 250
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K + +VP I +N +SS +VK+ +M + G + Y ++N + H
Sbjct: 251 KDRGIVPPIAVFNFMLSSLQKKGLHAKVKELWMQM-VEIGVTFSDFTYTVVINSLVKEGH 309
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
A E + + +TY+ LI L N D++ +++K +R + + NY
Sbjct: 310 SEEA-FKVFNEMKNCGFIPEEVTYNLLISLSIKRENSDEVLRLYKDMR--DKDIVPSNYT 366
Query: 226 CILSSYLML 234
C SS L L
Sbjct: 367 C--SSLLTL 373
>gi|115474201|ref|NP_001060699.1| Os07g0688100 [Oryza sativa Japonica Group]
gi|33146488|dbj|BAC79597.1| membrane-associated salt-inducible protein-like [Oryza sativa
Japonica Group]
gi|50509161|dbj|BAD30301.1| membrane-associated salt-inducible protein-like [Oryza sativa
Japonica Group]
gi|113612235|dbj|BAF22613.1| Os07g0688100 [Oryza sativa Japonica Group]
gi|215678726|dbj|BAG95163.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222637719|gb|EEE67851.1| hypothetical protein OsJ_25651 [Oryza sativa Japonica Group]
Length = 665
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 103/239 (43%), Gaps = 12/239 (5%)
Query: 24 VFGIHSGERYFEGLPLSAK--------TSETYTALLHLYAGAKWTEKAEELFERVKQSNL 75
+FG+ ++ E L+++ Y AL+ + A EKA + ++++
Sbjct: 342 IFGLCKNQKVDEAFELASRMLTLDIQLNVSIYNALISGFWRAGSIEKAYKTVSFMQRNGC 401
Query: 76 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKK 135
+ + YN ++ Y S+G +K ++ +++ V PD ++YN+ + +D+
Sbjct: 402 EPDVVTYNILLNHYCSIGMTDKAENLIRKMEMSGVNPDRYSYNILLKGLCKAHQLDKAFA 461
Query: 136 FL-DEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLII 194
F+ D M + GG D V L++ + A VN+ + E Q +TY LI
Sbjct: 462 FVSDHM--EVGGFCDIVSCNILIDAFCRAKK-VNSALNLFKEMGYKGIQADAVTYGILIN 518
Query: 195 LYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATS 253
G+G + ++++ + TK Y +L + +GH K +I Q Q S
Sbjct: 519 GLFGIGYSNLAEELFDQMLNTKIVPNVNVYNIMLHNLCKVGHFKHAQKIFWQMTQKEVS 577
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L++ G ++ AEELF+++ + + N +YN M+ VG + + ++
Sbjct: 512 TYGILINGLFGIGYSNLAEELFDQMLNTKIVPNVNVYNIMLHNLCKVGHFKHAQKIFWQM 571
Query: 106 KRKNVVPDIFTYNLWI 121
+K V PD T+N I
Sbjct: 572 TQKEVSPDTVTFNTLI 587
>gi|218200292|gb|EEC82719.1| hypothetical protein OsI_27404 [Oryza sativa Indica Group]
Length = 665
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 103/239 (43%), Gaps = 12/239 (5%)
Query: 24 VFGIHSGERYFEGLPLSAK--------TSETYTALLHLYAGAKWTEKAEELFERVKQSNL 75
+FG+ ++ E L+++ Y AL+ + A EKA + ++++
Sbjct: 342 IFGLCKNQKVDEAFELASRMLTLDIQLNVSIYNALISGFWRAGSIEKAYKTVSFMQRNGC 401
Query: 76 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKK 135
+ + YN ++ Y S+G +K ++ +++ V PD ++YN+ + +D+
Sbjct: 402 EPDVVTYNILLNHYCSIGMTDKAENLIRKMEMSGVNPDRYSYNILLKGLCKAHQLDKAFA 461
Query: 136 FL-DEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLII 194
F+ D M + GG D V L++ + A VN+ + E Q +TY LI
Sbjct: 462 FVSDHM--EVGGFCDIVSCNILIDAFCRAKK-VNSALNLFKEMGYKGIQADAVTYGILIN 518
Query: 195 LYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATS 253
G+G + ++++ + TK Y +L + +GH K +I Q Q S
Sbjct: 519 GLFGIGYSNLAEELFDQMLNTKIVPNVNVYNIMLHNLCKVGHFKHAQKIFWQMTQKEVS 577
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L++ G ++ AEELF+++ + + N +YN M+ VG + + ++
Sbjct: 512 TYGILINGLFGIGYSNLAEELFDQMLNTKIVPNVNVYNIMLHNLCKVGHFKHAQKIFWQM 571
Query: 106 KRKNVVPDIFTYNLWI 121
+K V PD T+N I
Sbjct: 572 TQKEVSPDTVTFNTLI 587
>gi|296084463|emb|CBI25022.3| unnamed protein product [Vitis vinifera]
Length = 927
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 93/207 (44%), Gaps = 6/207 (2%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y +++ + A +AE L +++ + +Y+ MM Y +G EK +V + +K
Sbjct: 376 YGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLK 435
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLD--EMSCDSGGSDDWVKYVNLVNIYITAS 164
P + +Y I+ + I +V K L+ +M +G + Y L+N ++
Sbjct: 436 ECGFTPSVISYGCLIN---LYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLK 492
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
NA + + K + + Y+ +I + G+GN D+ + K ++ + + T+R +
Sbjct: 493 DWANA-FAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTF 551
Query: 225 ICILSSYLMLGHLKEVGEIIDQWKQSA 251
+ I+ + G ++ EI D + S
Sbjct: 552 MPIIHGFARSGDMRRALEIFDMMRWSG 578
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 83/199 (41%), Gaps = 2/199 (1%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
+ TYT ++H YA T KA E F ++K L + Y ++ G+++
Sbjct: 615 SPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALA 674
Query: 101 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
V E+ + + + F YN+ I A ++ + + + +M G D Y + +N
Sbjct: 675 VTREMSSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQMK-QEGVQPDIHTYTSFINAC 733
Query: 161 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 220
A + A + T+ E E + TY LI +A +K + ++ ++ K
Sbjct: 734 CKAGDMQRA-TKTIQEMEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEMKSAGLKPD 792
Query: 221 SRNYICILSSYLMLGHLKE 239
Y C+++S L + E
Sbjct: 793 KAVYHCLMTSLLSRASVAE 811
>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
Length = 578
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 112/262 (42%), Gaps = 12/262 (4%)
Query: 35 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 94
E P ++ + ALL GAK + AE+ F + +S + +N +++ +GQ
Sbjct: 147 ESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQ 206
Query: 95 VEKVALVVEEIKRKNVVPDIFTYNLWISS-C--AATLNIDQVKKFLDEMSCDSGGSDDWV 151
+ K V ++IK + P + TYN I C N+ V L EM ++G S V
Sbjct: 207 LRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEM-VEAGISPTAV 265
Query: 152 KYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKS 211
+ L+N Y S+ A E ++ +TY+ LI +GL ++ K+++ K
Sbjct: 266 TFGVLINGYCKNSNTA-AAVRVFEEMKQQGIAASVVTYNSLI---SGLCSEGKVEEGVKL 321
Query: 212 LRMTKQKMTSRNYI---CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFS 268
+ + S N I C+L + G + + + ID + + D+ L+ +
Sbjct: 322 MEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTER-NVEPDVVIYTILIDGYR 380
Query: 269 DVGLTEKANEFHMLLLQKNCAP 290
+G E A + +K +P
Sbjct: 381 RLGKMEDAMAVKEAMAKKGISP 402
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 74/166 (44%), Gaps = 2/166 (1%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
YT L+ Y E A + E + + +S N YN ++T + G + +++E+K
Sbjct: 372 YTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMK 431
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
K + D+ TYN+ I + + + K LDEMS + G + + Y ++ + ++
Sbjct: 432 EKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMS-EVGLEPNHLTYNTIIQGFCDKGNI 490
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 212
+A EK + +TY+ I + +G D+ + + +
Sbjct: 491 KSA-YEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEM 535
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 37/201 (18%), Positives = 85/201 (42%), Gaps = 2/201 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+ +L + A + + + + N+ + ++Y ++ Y +G++E V E +
Sbjct: 336 TFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAM 395
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+K + P++ TYN I+ + + + LDEM + G D V Y L+
Sbjct: 396 AKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMK-EKGIEADVVTYNVLIGALCCKGE 454
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ A L E + + +TY+ +I + GN +I + +++ Y
Sbjct: 455 VRKA-VKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYN 513
Query: 226 CILSSYLMLGHLKEVGEIIDQ 246
+ + +G + E +++++
Sbjct: 514 VFIKYFCQIGKMDEANDLLNE 534
>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 676
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 116/282 (41%), Gaps = 17/282 (6%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSA-KTSET-YTALLHLYAGAKWTEKAEELFERVK 71
Y+ ID + K I F L K +E YTAL+ Y A + A L +R+
Sbjct: 252 YSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRML 311
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
+ N+ YN ++ +V++ L++E + +K + + TY + I + + D
Sbjct: 312 TEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFD 371
Query: 132 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 191
+ LD+M SG D Y ++ + T ++ AE + E+ + +TY
Sbjct: 372 YAHRILDQMV-SSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMP-DALTYTL 429
Query: 192 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 251
+I Y GLG + + K + T + Y C++ LKE E+ ++K A
Sbjct: 430 VIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHL-----LKE--ELTKKYKNVA 482
Query: 252 TSDFDISACNRLLGAFSDV---GLTEKANEFHMLLLQKNCAP 290
D S N +DV E A E +L+ C+P
Sbjct: 483 LCD---SIPNVFFADVADVWKMMKFETALELFEKMLEHGCSP 521
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 44/235 (18%), Positives = 84/235 (35%), Gaps = 39/235 (16%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVK 71
Y I+ M K + G R + + + TY AL+ Y E A+E+ + +
Sbjct: 112 YTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMH 171
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
++ + N YNE++ + V + ++ ++ + P + TYN I
Sbjct: 172 SNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHG-------- 223
Query: 132 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 191
C G D + +NL+N E + QW TY
Sbjct: 224 ---------QCKIGYLDSAYRLLNLMN-------------------ENGVVPDQW-TYSV 254
Query: 192 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 246
I G ++ + ++ SL+ K Y ++ Y G + + ++D+
Sbjct: 255 FIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDR 309
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 101/248 (40%), Gaps = 19/248 (7%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+YT L+H ++ +F+++++ + Y ++ G+ + + E+
Sbjct: 41 SYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEM 100
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ + P+I TY + I++ +++ ++ LDEM + G Y L++ Y
Sbjct: 101 RERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMV-EKGLVPSVPTYNALIDGYCKEG- 158
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL---RMTKQKMTSR 222
+V A L + TY+ LI + N + + + R+T +T
Sbjct: 159 MVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYN 218
Query: 223 NYI---CIL----SSYLMLGHLKEVGEIIDQWKQSATSDF-----DISACNRLLGAFSDV 270
+ I C + S+Y +L + E G + DQW S D I N L + +
Sbjct: 219 SLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEK 278
Query: 271 GLTEKANE 278
G+ KANE
Sbjct: 279 GI--KANE 284
>gi|449436409|ref|XP_004135985.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 105/256 (41%), Gaps = 11/256 (4%)
Query: 17 RIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLS 76
+++L VF E Y T ++AL+ Y + + ++A ++FE +K S L
Sbjct: 202 KVELAKGVFETALSEGY-------GNTVFAFSALISAYGKSGYFDEAIKVFESMKVSGLK 254
Query: 77 FNALMYNEMMTLYMSVG-QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKK 135
N + YN ++ G + ++V + EE+ R V PD TYN ++ C+ + +
Sbjct: 255 PNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARN 314
Query: 136 FLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIIL 195
+EM D G D Y L++ + A L K I +TY +
Sbjct: 315 LFNEM-IDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILP-NVVTYSTMADG 372
Query: 196 YAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDF 255
YA G + ++ ++ + +Y +LS Y LG ++ ++ + S
Sbjct: 373 YAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKK- 431
Query: 256 DISACNRLLGAFSDVG 271
D+ N LL + G
Sbjct: 432 DVVTYNALLDGYGKQG 447
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 55/102 (53%), Gaps = 7/102 (6%)
Query: 17 RIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLS 76
+ + +T+VF +R F L TY+ L+ +Y+ E+A E+F KQ+ L
Sbjct: 448 KFNEVTRVFKEMKKDRVFPNL-------LTYSTLIDVYSKGSLYEEAMEVFREFKQAGLK 500
Query: 77 FNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYN 118
+ ++Y+E++ G V+ L+++E+ ++ + P++ TYN
Sbjct: 501 ADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYN 542
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 97/231 (41%), Gaps = 3/231 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY +LL + + E A LF + + + YN ++ GQ++ ++ E+
Sbjct: 295 TYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEM 354
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K ++P++ TY+ A ++ +EM G D V Y L++IY
Sbjct: 355 PGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDR-VSYNTLLSIYAKLGR 413
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+A E S ++ +TY+ L+ Y G +++ +++K ++ + Y
Sbjct: 414 FEDA-LKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYS 472
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
++ Y +E E+ ++KQ+ D+ + L+ A GL + A
Sbjct: 473 TLIDVYSKGSLYEEAMEVFREFKQAGLKA-DVVLYSELINALCKNGLVDSA 522
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 67/149 (44%), Gaps = 6/149 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY ALL Y + +F+ +K+ + N L Y+ ++ +Y E+ V E
Sbjct: 435 TYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREF 494
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K+ + D+ Y+ I++ +D LDEM+ G + V Y ++++ + ++
Sbjct: 495 KQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMT-KEGIRPNVVTYNSIIDAFGRST- 552
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLII 194
+ LV+ + +RQ + F++I
Sbjct: 553 ----TAEFLVDGVGASNERQSESPSFMLI 577
>gi|255578090|ref|XP_002529915.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530592|gb|EEF32469.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 636
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 111/251 (44%), Gaps = 7/251 (2%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
S Y L+ + K EKA ELF+ + + Y +++ Y G ++K ++E
Sbjct: 155 SGMYIKLIVMLGKCKQPEKAHELFQAMIHEGCDVSHESYTALLSAYGRSGLLDKAFSLLE 214
Query: 104 EIKR-KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 162
E+KR + PD+ TY++ I SC D+ K L M G S + + Y L++ Y
Sbjct: 215 EMKRNPDCQPDVHTYSILIKSCVQVFAFDKAKTLLSNME-SLGISPNTITYNTLIDAYGK 273
Query: 163 ASHLVNAESSTLVE--AEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 220
A E +TLV+ ++++ W T + + + G + +++ ++ + + +
Sbjct: 274 AKMFEEME-ATLVKMLSQQNCEPDVW-TMNSTLRAFGISGQIETMEKCYEKFQGAGIEPS 331
Query: 221 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 280
+ +L SY G K++ ++ ++ Q + I N ++ AF G ++
Sbjct: 332 IMTFNVLLDSYGKAGDYKKMSAVM-EYMQKYHYSWTIITYNIVIDAFGRAGDLKQMEYLF 390
Query: 281 MLLLQKNCAPT 291
L+ + P+
Sbjct: 391 RLMRSERIKPS 401
Score = 37.7 bits (86), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 50/250 (20%), Positives = 105/250 (42%), Gaps = 7/250 (2%)
Query: 35 EGLPLSAKTSETYTALLHLYAGAKWTEKAEE-LFERVKQSNLSFNALMYNEMMTLYMSVG 93
E L +S T TY L+ Y AK E+ E L + + Q N + N + + G
Sbjct: 253 ESLGISPNTI-TYNTLIDAYGKAKMFEEMEATLVKMLSQQNCEPDVWTMNSTLRAFGISG 311
Query: 94 QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKY 153
Q+E + E+ + + P I T+N+ + S + ++ ++ M S + Y
Sbjct: 312 QIETMEKCYEKFQGAGIEPSIMTFNVLLDSYGKAGDYKKMSAVMEYMQ-KYHYSWTIITY 370
Query: 154 VNLVNIYITASHLVNAES-STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 212
+++ + A L E L+ +E+ + +T L+ Y +KI+ + + +
Sbjct: 371 NIVIDAFGRAGDLKQMEYLFRLMRSER--IKPSCVTLCSLVRAYGQAEKPEKIEGVLRFI 428
Query: 213 RMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGL 272
+ + + + C++ +Y +G E+ ++ +Q I+ ++ A+S G+
Sbjct: 429 ENSDITLDTVFFNCLVDAYGRMGCFAEMKGVLILMEQKGYRPDKITY-RTMIKAYSSKGM 487
Query: 273 TEKANEFHML 282
T+ E L
Sbjct: 488 TKHVKELQDL 497
>gi|255555231|ref|XP_002518652.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542033|gb|EEF43577.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 827
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 97/245 (39%), Gaps = 39/245 (15%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV-EKVALVVEEI 105
YT+L+ YA A +F+++++ + YN ++ +Y +G K++ +V +
Sbjct: 220 YTSLITAYASNGRYRDAVLVFKKMEEEGCKPTLITYNVILNVYGKMGMPWSKISGLVHGM 279
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K V PD +TYN IS C ++ + +EM SG S D V + L+++Y
Sbjct: 280 KSSGVAPDDYTYNTLISCCRRGSLYEEAAQVFEEMKL-SGFSPDKVTFNTLLDVY----- 333
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+S EA + + + ++ + I+ Y L
Sbjct: 334 ---GKSRRPKEAMEVLKEMEFSGFSPSIVTYNSL-------------------------- 364
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 285
+S+Y G L+E E+ DQ + D+ LL F G+ E A +
Sbjct: 365 --ISAYARDGLLREAMELKDQMVEKGIKP-DVFTYTTLLSGFEKAGMDEPAMRIFGEMRA 421
Query: 286 KNCAP 290
C P
Sbjct: 422 AGCKP 426
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/259 (17%), Positives = 112/259 (43%), Gaps = 5/259 (1%)
Query: 34 FEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMS 91
FE + LS + + T+ LL +Y ++ ++A E+ + ++ S S + + YN +++ Y
Sbjct: 311 FEEMKLSGFSPDKVTFNTLLDVYGKSRRPKEAMEVLKEMEFSGFSPSIVTYNSLISAYAR 370
Query: 92 VGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWV 151
G + + + +++ K + PD+FTY +S + + EM +G +
Sbjct: 371 DGLLREAMELKDQMVEKGIKPDVFTYTTLLSGFEKAGMDEPAMRIFGEMRA-AGCKPNIC 429
Query: 152 KYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKS 211
+ L+ ++ E E +T++ L+ ++ G ++ ++K
Sbjct: 430 TFNALIKMHGNRGRFAEM-MKVFEEIEICNCAPDIVTWNTLLAVFGQNGMDSEVSGVFKE 488
Query: 212 LRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 271
++ + ++S+Y G ++ + + ++ + D+S+ N +L A + G
Sbjct: 489 MKRAGFVPERDTFNTLISAYSRCGSFQQAMAVYKRMLEAGVTP-DLSSYNAVLAALARGG 547
Query: 272 LTEKANEFHMLLLQKNCAP 290
L E++ + + C P
Sbjct: 548 LWEQSEKVFAEMKDGRCKP 566
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 49/81 (60%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY +L+++++ ++ E++EE+ + + L + + YN ++ Y G+++ + + +
Sbjct: 674 TYNSLMYMHSRSENFERSEEVLKEILAKGLKPDLISYNTVIFAYCRNGRMKDASRIFSYM 733
Query: 106 KRKNVVPDIFTYNLWISSCAA 126
K +VPD+ TYN +++S AA
Sbjct: 734 KTYGLVPDVITYNTFVASYAA 754
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 93/229 (40%), Gaps = 6/229 (2%)
Query: 46 TYTALLHLYA--GAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
TY +L++Y G W+ K L +K S ++ + YN +++ E+ A V E
Sbjct: 254 TYNVILNVYGKMGMPWS-KISGLVHGMKSSGVAPDDYTYNTLISCCRRGSLYEEAAQVFE 312
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
E+K PD T+N + + + + L EM SG S V Y +L++ Y
Sbjct: 313 EMKLSGFSPDKVTFNTLLDVYGKSRRPKEAMEVLKEMEF-SGFSPSIVTYNSLISAYARD 371
Query: 164 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 223
L A EK I + TY L+ + G + +I+ +R K
Sbjct: 372 GLLREAMELKDQMVEKGI-KPDVFTYTTLLSGFEKAGMDEPAMRIFGEMRAAGCKPNICT 430
Query: 224 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGL 272
+ ++ + G E+ ++ ++ + + DI N LL F G+
Sbjct: 431 FNALIKMHGNRGRFAEMMKVFEEIEICNCAP-DIVTWNTLLAVFGQNGM 478
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 51/254 (20%), Positives = 108/254 (42%), Gaps = 14/254 (5%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+ AL+ ++ + ++FE ++ N + + + +N ++ ++ G +V+ V +E+
Sbjct: 430 TFNALIKMHGNRGRFAEMMKVFEEIEICNCAPDIVTWNTLLAVFGQNGMDSEVSGVFKEM 489
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
KR VP+ T+N IS+ + + Q M ++G + D Y N V +
Sbjct: 490 KRAGFVPERDTFNTLISAYSRCGSFQQAMAVYKRM-LEAGVTPDLSSY-NAVLAALARGG 547
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
L E + + +TY L+ YA N +I+++ +T +
Sbjct: 548 LWEQSEKVFAEMKDGRCKPNELTYCSLLHAYA---NSKEIERMHTLAEEIYSGLTEP--V 602
Query: 226 CILSSYLMLGH-----LKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 280
+L L+L + L E ++ K+ + D +S N ++ + + KANE
Sbjct: 603 PVLLKTLVLVNSKCDLLMETEHAFEELKKKGSPD--LSTLNAMIAIYGRRQMVAKANEIL 660
Query: 281 MLLLQKNCAPTNAS 294
+ + +P+ A+
Sbjct: 661 NFMNESGFSPSLAT 674
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 38/76 (50%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T A++ +Y + KA E+ + +S S + YN +M ++ E+ V++EI
Sbjct: 639 TLNAMIAIYGRRQMVAKANEILNFMNESGFSPSLATYNSLMYMHSRSENFERSEEVLKEI 698
Query: 106 KRKNVVPDIFTYNLWI 121
K + PD+ +YN I
Sbjct: 699 LAKGLKPDLISYNTVI 714
>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
Length = 722
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 84/195 (43%), Gaps = 2/195 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY +LL+ Y A ++A LF ++ + L+ L YN ++ Y +G +E+ + EE+
Sbjct: 380 TYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEM 439
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ +PD+ TY + + ++ ++F DEM G D Y + +T
Sbjct: 440 VEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEM-LSKGLQPDCFAYNTRIRAELTLGA 498
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ A V + I+ +TY+ LI GN + + + + Y
Sbjct: 499 IAKAFRLREVMMLEGISS-DTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYT 557
Query: 226 CILSSYLMLGHLKEV 240
C++ ++ G L+E
Sbjct: 558 CLIHAHCERGLLREA 572
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 56/124 (45%), Gaps = 5/124 (4%)
Query: 42 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 101
T TY A++H + E A+ F ++ L + + YN ++ Y G +++ L+
Sbjct: 341 PTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLL 400
Query: 102 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 161
+++ + P + TYN+ I ++++ ++ +EM + G D Y I +
Sbjct: 401 FGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEM-VEQGCLPDVCTYT----ILM 455
Query: 162 TASH 165
SH
Sbjct: 456 KGSH 459
Score = 40.8 bits (94), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 35 EGLPLSAKTSE-TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 93
EG+ LS K S TY L+ + +KA++L ++ + + YN M+ + G
Sbjct: 298 EGMRLSKKASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSG 357
Query: 94 QVEKVALVVEEIKRKNVVPDIFTYN 118
QVE + E++ + PD+ TYN
Sbjct: 358 QVEAAQVKFVEMRAMGLQPDVITYN 382
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 82/176 (46%), Gaps = 14/176 (7%)
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
E+A E+ E ++ S + ++ YN ++T ++ G V+K + E++ + ++P + TYN
Sbjct: 291 EEAAEMVEGMRLSKKA-SSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAM 349
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA--ESSTLVEAE 178
I + ++ + EM G D + Y +L+N Y A L A L A
Sbjct: 350 IHGLLQSGQVEAAQVKFVEMRA-MGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAG 408
Query: 179 KSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLML 234
+ T +TY+ LI Y LG+ ++ R K++M + + + +Y +L
Sbjct: 409 LAPT---VLTYNILIDGYCRLGDLEEA-------RRLKEEMVEQGCLPDVCTYTIL 454
Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 40/221 (18%), Positives = 95/221 (42%), Gaps = 6/221 (2%)
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK--NVVPDIFTYNLWISSCAATLN 129
Q + + + YN ++ ++ G+ +KVA++++E++ + +P+ T+N+ I+ A +
Sbjct: 230 QLGIEPSIVTYNTLLDSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGD 289
Query: 130 IDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITY 189
+++ + ++ M S Y L+ + + A+ L E E +TY
Sbjct: 290 LEEAAEMVEGMRLSKKASS--FTYNPLITGLLAKGFVKKADDLQL-EMENEGIMPTVVTY 346
Query: 190 DFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQ 249
+ +I G + + +R + Y +L+ Y G LKE + +
Sbjct: 347 NAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRH 406
Query: 250 SATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
+ + ++ N L+ + +G E+A ++++ C P
Sbjct: 407 AGLAPTVLTY-NILIDGYCRLGDLEEARRLKEEMVEQGCLP 446
>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
Length = 1512
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 107/248 (43%), Gaps = 9/248 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+T L+ +A+++ E ++ + L YN +M VGQ+E + E +
Sbjct: 1192 TFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESL 1251
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ + ++F+YN+ I+ ID+ +F +EM G V Y L+ +
Sbjct: 1252 ADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMR-PKGLKPSTVTYNTLIGALCQSGR 1310
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGL---GNKDKIDQIWKSLRMTKQKMTSR 222
+ A+ VE + T Q++ +L GL G+ ++ +++S++ T+ K
Sbjct: 1311 VRTAQ-KLFVEMQ---TCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIE 1366
Query: 223 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 282
+ +L G L+E + D+ ++ D A N L+ + G+ +A +
Sbjct: 1367 VFSILLDGMCRAGKLEEAWKQFDEISKNGLEP-DTIAYNILINGLCNKGMLSEAVKLLWQ 1425
Query: 283 LLQKNCAP 290
+ +K C P
Sbjct: 1426 MEEKGCLP 1433
>gi|297723401|ref|NP_001174064.1| Os04g0583150 [Oryza sativa Japonica Group]
gi|38346804|emb|CAE04154.2| OSJNBa0088A01.11 [Oryza sativa Japonica Group]
gi|125591406|gb|EAZ31756.1| hypothetical protein OsJ_15910 [Oryza sativa Japonica Group]
gi|215686818|dbj|BAG89668.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255675722|dbj|BAH92792.1| Os04g0583150 [Oryza sativa Japonica Group]
Length = 606
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/263 (20%), Positives = 115/263 (43%), Gaps = 38/263 (14%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
A + Y++++ A A + AE+L+ + + M+ +++ +++ G+VEK+
Sbjct: 292 APNATIYSSIIRSLADAHESSAAEDLYNEAWKKGRLGDPDMFLKVIVMHVEAGRVEKIMG 351
Query: 101 VVEE--------------------IKRKNVVPDIFTYNLWIS-SC-------AATLNI-- 130
V ++ +KR+ + P I Y+ I+ C A+ +N+
Sbjct: 352 VAKDMRETGLRVTDCILSTIVNGFVKRRGLKPAIRAYDKLIALGCEPGQVTYASVINVYC 411
Query: 131 -----DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQ 185
D+ + EM D G V Y N++++Y S +A V +K
Sbjct: 412 QLGRSDRAESVFSEM-IDRGFDKCVVAYGNMISMYGKISRASDAMRLLAVMKKKGCEPNI 470
Query: 186 WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIID 245
W+ Y+ L+ ++ LGN + ++IWK + K + +Y I++++ G L ++
Sbjct: 471 WV-YNSLLDMHGRLGNSRQAEKIWKEMMRRKIQPDRISYTAIINAFNRSGELDRCMDLYQ 529
Query: 246 QWKQSATSDFDISACNRLLGAFS 268
+++++ D + ++G FS
Sbjct: 530 EFRETG-GKVDTALAGLMVGVFS 551
>gi|294461912|gb|ADE76512.1| unknown [Picea sitchensis]
Length = 224
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 82/192 (42%), Gaps = 8/192 (4%)
Query: 57 AKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFT 116
K +A L + + +S + +YN +M Y + + + + +++ + PD+ T
Sbjct: 7 GKNMREARNLLDGMLESGCKPDGFLYNTLMKGYCKINKANEALEIYKKMDAEGCAPDVVT 66
Query: 117 YNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVE 176
+N I + +D+ KKFL M +G D + Y +L+N + A + L E
Sbjct: 67 FNTLIFGLSKVAKVDEAKKFLKLMV-RAGHPPDVITYTSLMNGMCRKGDAMGA-LALLEE 124
Query: 177 AEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQK---MTSRNYICILSSYLM 233
++S+ Q TY+ L+ GL + Q K + K K + S Y L +
Sbjct: 125 MQQSVCQPDGCTYNTLM---HGLCMCQHLHQALKLYEVLKSKEVDLESGTYAAFLKALCR 181
Query: 234 LGHLKEVGEIID 245
G + E E+ D
Sbjct: 182 AGKVAEAYEVFD 193
>gi|115461420|ref|NP_001054310.1| Os04g0684500 [Oryza sativa Japonica Group]
gi|113565881|dbj|BAF16224.1| Os04g0684500 [Oryza sativa Japonica Group]
Length = 901
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 98/220 (44%), Gaps = 16/220 (7%)
Query: 39 LSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV 98
LS+ Y+ ++H + + E+AEEL +++ + +Y+ MM Y + K
Sbjct: 364 LSSLNGIIYSNIIHAHCQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKC 423
Query: 99 ALVVEEIKRKNVVPDIFTY----NLW--ISSCAATLNIDQVKKFLDEM-SCDSGGSDDWV 151
+V E +K P I +Y NL+ I A L+I + EM SC G +
Sbjct: 424 LVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISK------EMESC--GIKHNNK 475
Query: 152 KYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKS 211
Y L+N +I NA + E +S Q Y+ LI + +GN D+ I +
Sbjct: 476 TYSMLINGFIHLHDFANA-FAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEK 534
Query: 212 LRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 251
++ + + ++R + I+ Y + G +K + +D ++S
Sbjct: 535 MQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSG 574
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 87/188 (46%), Gaps = 4/188 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT ++ YA + KA E F ++K+S L + +Y ++ G+++ V E+
Sbjct: 616 TYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREM 675
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ + + F YN+ I A ++ + + + +M D G + Y + +N A
Sbjct: 676 SFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKED-GVPPNIHTYTSYINACCKAGD 734
Query: 166 LVNAESSTLVEAEKSITQRQWI-TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
+ AE ++E + + + TY LI +A + D+ + ++ +++ K +Y
Sbjct: 735 MQRAEK--VIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASY 792
Query: 225 ICILSSYL 232
C+++S L
Sbjct: 793 HCLVTSLL 800
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 91/204 (44%), Gaps = 4/204 (1%)
Query: 34 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 93
FE +P ++ + ++ YA A FE ++ + NA ++ ++ Y
Sbjct: 256 FERIPKPSRRE--FGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVAR 313
Query: 94 QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKY 153
+ VEE+K + + I TY++ IS A +N Q L + + S + + Y
Sbjct: 314 DMRGALSCVEEMKSEGLELTIVTYSILISG-FAKINDSQSADNLFKEAKTKLSSLNGIIY 372
Query: 154 VNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 213
N+++ + + ++ AE + E E+ Y ++ Y + N++K +++ L+
Sbjct: 373 SNIIHAHCQSGNMERAE-ELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLK 431
Query: 214 MTKQKMTSRNYICILSSYLMLGHL 237
K + +Y C+L+ Y+ +G +
Sbjct: 432 ECGFKPSIISYGCLLNLYVKIGKV 455
>gi|449518511|ref|XP_004166285.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 105/256 (41%), Gaps = 11/256 (4%)
Query: 17 RIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLS 76
+++L VF E Y T ++AL+ Y + + ++A ++FE +K S L
Sbjct: 202 KVELAKGVFETALSEGY-------GNTVFAFSALISAYGKSGYFDEAIKVFESMKVSGLK 254
Query: 77 FNALMYNEMMTLYMSVG-QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKK 135
N + YN ++ G + ++V + EE+ R V PD TYN ++ C+ + +
Sbjct: 255 PNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARN 314
Query: 136 FLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIIL 195
+EM D G D Y L++ + A L K I +TY +
Sbjct: 315 LFNEM-IDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILP-NVVTYSTMADG 372
Query: 196 YAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDF 255
YA G + ++ ++ + +Y +LS Y LG ++ ++ + S
Sbjct: 373 YAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKK- 431
Query: 256 DISACNRLLGAFSDVG 271
D+ N LL + G
Sbjct: 432 DVVTYNALLDGYGKQG 447
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 55/102 (53%), Gaps = 7/102 (6%)
Query: 17 RIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLS 76
+ + +T+VF +R F L TY+ L+ +Y+ E+A E+F KQ+ L
Sbjct: 448 KFNEVTRVFKEMKKDRVFPNL-------LTYSTLIDVYSKGSLYEEAMEVFREFKQAGLK 500
Query: 77 FNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYN 118
+ ++Y+E++ G V+ L+++E+ ++ + P++ TYN
Sbjct: 501 ADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYN 542
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 97/231 (41%), Gaps = 3/231 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY +LL + + E A LF + + + YN ++ GQ++ ++ E+
Sbjct: 295 TYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEM 354
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K ++P++ TY+ A ++ +EM G D V Y L++IY
Sbjct: 355 PGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDR-VSYNTLLSIYAKLGR 413
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+A E S ++ +TY+ L+ Y G +++ +++K ++ + Y
Sbjct: 414 FEDA-LKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYS 472
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
++ Y +E E+ ++KQ+ D+ + L+ A GL + A
Sbjct: 473 TLIDVYSKGSLYEEAMEVFREFKQAGLKA-DVVLYSELINALCKNGLVDSA 522
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 67/149 (44%), Gaps = 6/149 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY ALL Y + +F+ +K+ + N L Y+ ++ +Y E+ V E
Sbjct: 435 TYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREF 494
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K+ + D+ Y+ I++ +D LDEM+ G + V Y ++++ + ++
Sbjct: 495 KQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMT-KEGIRPNVVTYNSIIDAFGRST- 552
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLII 194
+ LV+ + +RQ + F++I
Sbjct: 553 ----TAEFLVDGVGASNERQSESPTFMLI 577
>gi|225464410|ref|XP_002269194.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic [Vitis vinifera]
Length = 929
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 93/207 (44%), Gaps = 6/207 (2%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y +++ + A +AE L +++ + +Y+ MM Y +G EK +V + +K
Sbjct: 397 YGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLK 456
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLD--EMSCDSGGSDDWVKYVNLVNIYITAS 164
P + +Y I+ + I +V K L+ +M +G + Y L+N ++
Sbjct: 457 ECGFTPSVISYGCLIN---LYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLK 513
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
NA + + K + + Y+ +I + G+GN D+ + K ++ + + T+R +
Sbjct: 514 DWANA-FAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTF 572
Query: 225 ICILSSYLMLGHLKEVGEIIDQWKQSA 251
+ I+ + G ++ EI D + S
Sbjct: 573 MPIIHGFARSGDMRRALEIFDMMRWSG 599
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 82/194 (42%), Gaps = 2/194 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT ++H YA T KA E F ++K L + Y ++ G+++ V E+
Sbjct: 641 TYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALAVTREM 700
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ + + F YN+ I A ++ + + + +M G D Y + +N A
Sbjct: 701 SSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQMK-QEGVQPDIHTYTSFINACCKAGD 759
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ A + T+ E E + TY LI +A +K + ++ ++ K Y
Sbjct: 760 MQRA-TKTIQEMEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEMKSAGLKPDKAVYH 818
Query: 226 CILSSYLMLGHLKE 239
C+++S L + E
Sbjct: 819 CLMTSLLSRASVAE 832
>gi|168024876|ref|XP_001764961.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683770|gb|EDQ70177.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 743
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 97/229 (42%), Gaps = 9/229 (3%)
Query: 51 LHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNV 110
L+ Y E+AE + + V++S +S + YN M+T Y +K A +VE+++ +++
Sbjct: 158 LNTYGQQGKIEEAERIMDTVEESGMSLGLVGYNSMITAYGKACLYDKAARLVEKMREEDL 217
Query: 111 VPDIFTYNLWISSCAATLNIDQVKKFLDEM---SCDSGGSDDWVKYVNLVNIYITASHLV 167
VPD TY+ I +C + + + EM S+ + L+++Y A V
Sbjct: 218 VPDSITYSCMIGACGRVGKLKEALSWFAEMKRLEIKPASSN----FNTLISLYGKAKD-V 272
Query: 168 NAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICI 227
+ E +K + W T D + Y G + +I LR + +Y +
Sbjct: 273 EGIVRVITEMKKYGCKPDWQTLDAAVRAYDRAGLIKDVTEILNLLRDAGWVEETGSYGTL 332
Query: 228 LSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
L YL KE I +++ + + C L+ F D + + A
Sbjct: 333 LHVYLKCNLPKEALRIFLAMRKAGMAPKEY-MCRSLICTFRDAEMFDGA 380
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 108/240 (45%), Gaps = 8/240 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY+ +L LY + +AE +F + S + + Y+ M+ LY G EK +V E+
Sbjct: 84 TYSMMLLLYQRHRKVAEAESVFSHMLNSGVQ-AVVAYSVMIALYNREGLFEKSEQIVTEM 142
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+R NV PD + +++ I++ ++ +D + +SG S V Y +++ Y A
Sbjct: 143 RRNNVTPDRDNWLKQLNTYGQQGKIEEAERIMDTVE-ESGMSLGLVGYNSMITAYGKAC- 200
Query: 166 LVNAESSTLVEA--EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 223
+ +++ LVE E+ + ITY +I +G + + ++ + K S N
Sbjct: 201 -LYDKAARLVEKMREEDLVPDS-ITYSCMIGACGRVGKLKEALSWFAEMKRLEIKPASSN 258
Query: 224 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 283
+ ++S Y ++ + +I + K+ D + + A+ GL + E LL
Sbjct: 259 FNTLISLYGKAKDVEGIVRVITEMKKYGCKP-DWQTLDAAVRAYDRAGLIKDVTEILNLL 317
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 64/139 (46%), Gaps = 1/139 (0%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
E Y ++L Y A EK ++ R++ S + + YN ++ Y + ++ +
Sbjct: 606 EAYNSILDAYGKAGQMEKVSDVLARMENSGMRMDLASYNILINTYGKNYMIAEMETLFRT 665
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
++ + VVPD +TYN I + D+ + M D+G S D V Y+ LV+ + A
Sbjct: 666 MQEEGVVPDRWTYNTIIRTYGFADYPDRAVYWFKAMQ-DAGISPDRVTYMILVSTFERAG 724
Query: 165 HLVNAESSTLVEAEKSITQ 183
++ A L ++ T+
Sbjct: 725 NIDEAARWCLRMSQAGYTR 743
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 91/212 (42%), Gaps = 9/212 (4%)
Query: 14 YATRIDLMTKVFGIHS-GERYFEGLPLSAKTSE----TYTALLHLYAGAKWTEKAEELFE 68
Y ++M ++G ER + L L+ + +++ L+H YA + E
Sbjct: 535 YNITFNVMIDLYGKAGMPERAHKALKLAQQFGSADKISFSTLVHAYAKKQDFPNMEAALW 594
Query: 69 RVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATL 128
++ + + YN ++ Y GQ+EKV+ V+ ++ + D+ +YN+ I++
Sbjct: 595 EMQNAGYGSSLEAYNSILDAYGKAGQMEKVSDVLARMENSGMRMDLASYNILINTYGKNY 654
Query: 129 NIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWIT 188
I +++ M + D W Y ++ Y A + A + I+ + +T
Sbjct: 655 MIAEMETLFRTMQEEGVVPDRWT-YNTIIRTYGFADYPDRAVYWFKAMQDAGISPDR-VT 712
Query: 189 YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 220
Y L+ + GN D+ + W LRM++ T
Sbjct: 713 YMILVSTFERAGNIDEAAR-W-CLRMSQAGYT 742
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 79/184 (42%), Gaps = 12/184 (6%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y +++ Y A +KA L E++++ +L +++ Y+ M+ VG++++ E+K
Sbjct: 189 YNSMITAYGKACLYDKAARLVEKMREEDLVPDSITYSCMIGACGRVGKLKEALSWFAEMK 248
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
R + P +N IS +++ + + + EM G DW V Y A +
Sbjct: 249 RLEIKPASSNFNTLISLYGKAKDVEGIVRVITEMK-KYGCKPDWQTLDAAVRAYDRAGLI 307
Query: 167 VNAESSTLVEAEKSITQRQWI----TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 222
+ + E + W+ +Y L+ +Y + +I+ L M K M +
Sbjct: 308 KD-----VTEILNLLRDAGWVEETGSYGTLLHVYLKCNLPKEALRIF--LAMRKAGMAPK 360
Query: 223 NYIC 226
Y+C
Sbjct: 361 EYMC 364
Score = 37.4 bits (85), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 40/80 (50%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
E+ ++++Y ++AE LF ++ S + YN M+ +YM E V +
Sbjct: 397 ESSCTMIYVYGMNGDVKEAEGLFHSLRSSVKRLDIFAYNVMINVYMRCDMPEGAIKVYKL 456
Query: 105 IKRKNVVPDIFTYNLWISSC 124
++ +++PD +TY+ + C
Sbjct: 457 MEEDHLLPDAYTYHSMLRMC 476
Score = 37.0 bits (84), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 45/247 (18%), Positives = 105/247 (42%), Gaps = 3/247 (1%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
S TY+ ++ ++A F +K+ + + +N +++LY VE + V+
Sbjct: 221 SITYSCMIGACGRVGKLKEALSWFAEMKRLEIKPASSNFNTLISLYGKAKDVEGIVRVIT 280
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
E+K+ PD T + + + I V + L+ + D+G ++ Y L+++Y+
Sbjct: 281 EMKKYGCKPDWQTLDAAVRAYDRAGLIKDVTEILNLLR-DAGWVEETGSYGTLLHVYLKC 339
Query: 164 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 223
+ A L + + ++++ LI + D ++K +++ + +
Sbjct: 340 NLPKEALRIFLAMRKAGMAPKEYMCRS-LICTFRDAEMFDGAKSVFKEMQVAGVTPSLES 398
Query: 224 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 283
++ Y M G +KE + + S+ DI A N ++ + + E A + + L+
Sbjct: 399 SCTMIYVYGMNGDVKEAEGLFHSLR-SSVKRLDIFAYNVMINVYMRCDMPEGAIKVYKLM 457
Query: 284 LQKNCAP 290
+ + P
Sbjct: 458 EEDHLLP 464
>gi|125549468|gb|EAY95290.1| hypothetical protein OsI_17116 [Oryza sativa Indica Group]
Length = 608
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/263 (20%), Positives = 115/263 (43%), Gaps = 38/263 (14%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
A + Y++++ A A + AE+L+ + + + M+ +++ +++ G+VEK
Sbjct: 294 APNATIYSSIIRSLADAHESSAAEDLYNEAWKKGMLGDPDMFLKVIVMHVEAGRVEKTMG 353
Query: 101 VVEE--------------------IKRKNVVPDIFTYNLWIS-SC-------AATLNI-- 130
V ++ +KR+ + P I Y+ I+ C A+ +N+
Sbjct: 354 VAKDMRETGLRVTDCILSTIVNGFVKRRGLKPAIRAYDKLIALGCEPGQVTYASVINVYC 413
Query: 131 -----DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQ 185
D+ + EM D G V Y N++++Y S +A V +K
Sbjct: 414 QLGRSDRAESVFSEM-IDRGFDKCVVAYGNMISMYGKISRASDAMRLLAVMKKKGCEPNI 472
Query: 186 WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIID 245
W+ Y+ L+ ++ LGN + ++IWK + K + +Y I++++ G L ++
Sbjct: 473 WV-YNSLLDMHGRLGNSRQAEKIWKEMMRRKIQPDRISYTAIINAFNRSGELDRCMDLYQ 531
Query: 246 QWKQSATSDFDISACNRLLGAFS 268
+++++ D + ++G FS
Sbjct: 532 EFRETG-GKVDTALAGLMVGVFS 553
>gi|218184541|gb|EEC66968.1| hypothetical protein OsI_33625 [Oryza sativa Indica Group]
Length = 1351
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/206 (19%), Positives = 91/206 (44%), Gaps = 2/206 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L++ + + +A E+++ + + + Y+ +M + VE V ++ E+
Sbjct: 241 TYNGLVYFLVKSGFDREALEVYKVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREM 300
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ V P++++Y + I D+ + L EM + G D + + L+ + A
Sbjct: 301 EAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEME-NEGCKPDVITHTVLIQVLCDAGR 359
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ +A+ + +KS + +TY L+ +A G + +IW +++ Y
Sbjct: 360 ISDAK-DVFWKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMKADGYNDNVVAYT 418
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSA 251
++ + +G + E E+ D+ KQ
Sbjct: 419 AVIDALCQVGRVFEALEMFDEMKQKG 444
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 108/238 (45%), Gaps = 11/238 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT ++ + A ++A ++F + ++N + L+ N ++ G+ ++ + ++
Sbjct: 556 TYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQL 615
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K N+ P TYN ++ + +V L+EM S + + Y +++
Sbjct: 616 KEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMY-HSNYPPNLITYNTILDCLCK--- 671
Query: 166 LVNAESSTLVEAEKSITQRQWIT--YDFLIILYAGLGNKDKIDQIWKSL-RMTKQKMTSR 222
N + ++ S+T + I + ++Y GL +++ ++ + +M K +
Sbjct: 672 --NGAVNDALDMLYSMTTKGCIPDLSSYNTVIY-GLVKEERYNEAFSIFCQMKKVLIPDY 728
Query: 223 NYIC-ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 279
+C IL S++ +G +KE II ++ S D S+C+ L+ TEK+ EF
Sbjct: 729 ATLCTILPSFVKIGLMKEALHIIKEYFLQPGSKTDRSSCHSLMEGILKKAGTEKSIEF 786
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 80/196 (40%), Gaps = 4/196 (2%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
+ T TY LL A E AE LF + + N +YN ++ + G EKV
Sbjct: 936 SPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCH 995
Query: 101 VVEEIKRKNVVPDIFTYNLWISS-CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 159
+ +++ + + PDI +Y + I + C A D + F + + G D + Y NL+
Sbjct: 996 LFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLL--EMGLEPDLITY-NLLID 1052
Query: 160 YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 219
+ S + S E +K TY+ LI+ G + ++++ L K
Sbjct: 1053 GLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKP 1112
Query: 220 TSRNYICILSSYLMLG 235
Y ++ Y + G
Sbjct: 1113 NVFTYNALIRGYSVSG 1128
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 91/226 (40%), Gaps = 5/226 (2%)
Query: 70 VKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLN 129
+K++ + NA YN ++ + G + V + + VVP + TY++ + + +
Sbjct: 230 MKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYKVMMVDGVVPSVRTYSVLMVAFGKRRD 289
Query: 130 IDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITY 189
++ V L EM G + Y + + A A L E E + IT+
Sbjct: 290 VETVLWLLREMEA-HGVKPNVYSYTICIRVLGQARRFDEA-YRILAEMENEGCKPDVITH 347
Query: 190 DFLIILYAGLGN-KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK 248
LI + G D D WK ++ + QK YI +L + G + V EI + K
Sbjct: 348 TVLIQVLCDAGRISDAKDVFWK-MKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMK 406
Query: 249 QSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
+D ++ A ++ A VG +A E + QK P S
Sbjct: 407 ADGYND-NVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYS 451
Score = 40.4 bits (93), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 52/120 (43%), Gaps = 2/120 (1%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVK 71
Y ID + K ++ G YF L + TY L+ +K E+A LF ++
Sbjct: 1012 YTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQ 1071
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
+ + N YN ++ G+ + + EE+ K P++FTYN I + + + D
Sbjct: 1072 KKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTD 1131
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY LL +A ++ E++ +K + N + Y ++ VG+V + + +E+
Sbjct: 381 TYITLLDKFADNGESQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEM 440
Query: 106 KRKNVVPDIFTYNLWISS 123
K+K +VP+ ++YN IS
Sbjct: 441 KQKGIVPEQYSYNSLISG 458
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 53/118 (44%), Gaps = 2/118 (1%)
Query: 52 HLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVV 111
HL K E A EL ++ K +S YN ++ + ++ + E+K
Sbjct: 808 HLCKQKKALE-AHELVKKFKSFGVSLKTGSYNSLICGLVDENLIDIAEGLFAEMKELGCG 866
Query: 112 PDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 169
PD FTYNL + + ++ I+++ K +EM G +V Y +++ + + L A
Sbjct: 867 PDEFTYNLLLDAMGKSMRIEEMLKVQEEMH-RKGYESTYVTYNTIISGLVKSRRLEQA 923
>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g19440, chloroplastic-like [Cucumis sativus]
Length = 799
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 109/256 (42%), Gaps = 6/256 (2%)
Query: 35 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 94
+G P S TS AL+H GA +A + + + + L + + YN ++ + + G+
Sbjct: 459 KGSPASKVTS---NALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGK 515
Query: 95 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 154
VE + EE+ ++ + PDI+TYN + +D K DE SG + Y
Sbjct: 516 VEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFK-ASGLISNIHTYG 574
Query: 155 NLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM 214
++ Y A+ + + E + E + I Y+ +I + GN Q+ ++++
Sbjct: 575 IMMEGYCKANRIEDVE-NLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKS 633
Query: 215 TKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTE 274
Y ++ +G +++ +ID+ ++ ++ L+G + +G +
Sbjct: 634 KGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVP-NVVCYTALIGGYCKLGQMD 692
Query: 275 KANEFHMLLLQKNCAP 290
A + ++ N P
Sbjct: 693 TAESTWLEMISFNIHP 708
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 1/112 (0%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
YTAL+ Y + AE + + N+ N Y M+ Y +G +EK ++ ++K
Sbjct: 678 YTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMK 737
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 158
+VPD+ TYN+ + ++D K D+M+ + G D + Y LV+
Sbjct: 738 ESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATE-GLPVDEITYTTLVH 788
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 1/124 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY++L+H E A+ L + +++ N + Y ++ Y +GQ++ E+
Sbjct: 642 TYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEM 701
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
N+ P+ FTY + I N+++ L +M +SG D V Y L N + A+
Sbjct: 702 ISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMK-ESGIVPDVVTYNVLTNGFCKAND 760
Query: 166 LVNA 169
+ NA
Sbjct: 761 MDNA 764
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/223 (19%), Positives = 80/223 (35%), Gaps = 38/223 (17%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
TY ++ Y A E E LF + + N+++YN ++ + G V ++E
Sbjct: 571 HTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLEN 630
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+K K ++P+ TY+ I ++ K +DEM + +V V
Sbjct: 631 MKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMR-----KEGFVPNV---------- 675
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
+ Y LI Y LG D + W + Y
Sbjct: 676 ----------------------VCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTY 713
Query: 225 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAF 267
++ Y LG++++ ++ + K+S D+ N L F
Sbjct: 714 TVMIDGYCKLGNMEKANNLLIKMKESGIVP-DVVTYNVLTNGF 755
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 75/167 (44%), Gaps = 5/167 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
++T +++ E A ELF ++++ +S N + YN ++ G+++ + E++
Sbjct: 222 SFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKM 281
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K V P++ TY I+ D+V LDEM +G + + V + NL++ Y +
Sbjct: 282 TVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMI-GAGFNPNVVVFNNLIDGYCKMGN 340
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 212
+ A V K+IT Y L G D+I+ +L
Sbjct: 341 IEGALKIKDVMISKNITPTSVTLYS----LMQGFCKSDQIEHAENAL 383
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 82/197 (41%), Gaps = 18/197 (9%)
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+ RK P + T N +SS ++ + MS G D + N++N
Sbjct: 177 LARKGTFPSLKTCNFXLSSLVKANEFEKCCEVFRVMS--EGACPDVFSFTNVINALCKGG 234
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN- 223
+ NA ++ EK +TY+ +I GL ++D ++ K+KMT +
Sbjct: 235 KMENA-IELFMKMEKLGISPNVVTYNCII---NGLCQNGRLDNAFE----LKEKMTVKGV 286
Query: 224 ------YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 277
Y +++ + L +V I+D+ A + ++ N L+ + +G E A
Sbjct: 287 QPNLKTYGALINGLIKLNFFDKVNHILDEM-IGAGFNPNVVVFNNLIDGYCKMGNIEGAL 345
Query: 278 EFHMLLLQKNCAPTNAS 294
+ +++ KN PT+ +
Sbjct: 346 KIKDVMISKNITPTSVT 362
>gi|125592120|gb|EAZ32470.1| hypothetical protein OsJ_16686 [Oryza sativa Japonica Group]
Length = 879
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 98/220 (44%), Gaps = 16/220 (7%)
Query: 39 LSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV 98
LS+ Y+ ++H + + E+AEEL +++ + +Y+ MM Y + K
Sbjct: 342 LSSLNGIIYSNIIHAHCQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKC 401
Query: 99 ALVVEEIKRKNVVPDIFTY----NLW--ISSCAATLNIDQVKKFLDEM-SCDSGGSDDWV 151
+V E +K P I +Y NL+ I A L+I + EM SC G +
Sbjct: 402 LVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISK------EMESC--GIKHNNK 453
Query: 152 KYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKS 211
Y L+N +I NA + E +S Q Y+ LI + +GN D+ I +
Sbjct: 454 TYSMLINGFIHLHDFANA-FAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEK 512
Query: 212 LRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 251
++ + + ++R + I+ Y + G +K + +D ++S
Sbjct: 513 MQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSG 552
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 87/188 (46%), Gaps = 4/188 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT ++ YA + KA E F ++K+S L + +Y ++ G+++ V E+
Sbjct: 594 TYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREM 653
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ + + F YN+ I A ++ + + + +M D G + Y + +N A
Sbjct: 654 SFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKED-GVPPNIHTYTSYINACCKAGD 712
Query: 166 LVNAESSTLVEAEKSITQRQWI-TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
+ AE ++E + + + TY LI +A + D+ + ++ +++ K +Y
Sbjct: 713 MQRAEK--VIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASY 770
Query: 225 ICILSSYL 232
C+++S L
Sbjct: 771 HCLVTSLL 778
Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 91/204 (44%), Gaps = 4/204 (1%)
Query: 34 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 93
FE +P ++ + ++ YA A FE ++ + NA ++ ++ Y
Sbjct: 234 FERIPKPSRRE--FGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVAR 291
Query: 94 QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKY 153
+ VEE+K + + I TY++ IS A +N Q L + + S + + Y
Sbjct: 292 DMRGALSCVEEMKSEGLELTIVTYSILISG-FAKINDSQSADNLFKEAKTKLSSLNGIIY 350
Query: 154 VNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 213
N+++ + + ++ AE + E E+ Y ++ Y + N++K +++ L+
Sbjct: 351 SNIIHAHCQSGNMERAE-ELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLK 409
Query: 214 MTKQKMTSRNYICILSSYLMLGHL 237
K + +Y C+L+ Y+ +G +
Sbjct: 410 ECGFKPSIISYGCLLNLYVKIGKV 433
>gi|414888270|tpg|DAA64284.1| TPA: hypothetical protein ZEAMMB73_921256 [Zea mays]
Length = 890
Score = 57.0 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 68/299 (22%), Positives = 122/299 (40%), Gaps = 44/299 (14%)
Query: 34 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 93
F LP ++T+ +YT+L+ YA E+A L +++K + ++ A YN ++
Sbjct: 186 FHDLPAESRTALSYTSLIAAYARNALHEEARALLDQMKATGVAPTAATYNTVLAACARAT 245
Query: 94 Q----VEKVALVVEEIKRK---NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGG 146
+ + + E++ +V PD+ TYN +++ A DQ + L M ++G
Sbjct: 246 DPPVPFDMLLGLFAEMRHDASPSVRPDLTTYNTLLAAAAVRSLADQSEMLLHTM-LEAGV 304
Query: 147 SDDWVKYVNLVNIYITASHLVNA-----------------------ESSTLV--EAEKSI 181
S D V Y ++V+ + +A +L A E+ T V A+
Sbjct: 305 SPDTVSYRHIVDAFASAGNLSRAAELFSEMAATGHTADASAYLGLMEAHTRVGATADAVA 364
Query: 182 TQRQW---------ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYL 232
RQ TY L+ LY G D + Q+++ +R T+ Y + +
Sbjct: 365 VLRQMQADGCAPTAATYRVLLDLYGRQGRFDGVRQLFREMRTAVPPDTA-TYNVLFRVFG 423
Query: 233 MLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 291
G KEV E+ ++ D+ C ++ A GL A E + ++ PT
Sbjct: 424 DGGFFKEVVELFHDMLKTGVQP-DMVTCENVMAACGHGGLHGDAREVLEYMTREGMVPT 481
>gi|225427240|ref|XP_002278451.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
chloroplastic [Vitis vinifera]
Length = 723
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 69/131 (52%), Gaps = 3/131 (2%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVK 71
Y T ++ M K FE + S ++T TAL+ +Y A+W A EL+ER++
Sbjct: 342 YNTLLEAMGKAGKPGLARSLFEEMVGSGVIPDAKTLTALVKIYGKARWARDALELWERMR 401
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKR-KNVVPDIFTYNLWISSCAATLNI 130
+ + ++YN ++++ +G E+ + E++K+ ++ PD ++Y ++ + N+
Sbjct: 402 SNGWPMDFILYNTLLSMCADLGLEEEAEKLFEDMKKSEHCRPDSWSYTAMLNIYGSGGNV 461
Query: 131 DQVKKFLDEMS 141
D+ + DEMS
Sbjct: 462 DRAMQLFDEMS 472
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 95/206 (46%), Gaps = 11/206 (5%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY+A+L +YA E+ L+ER + S + + + + ++ G + + V++E+
Sbjct: 271 TYSAILDVYAKLGKVEEVLSLYERGRASGWKPDPIAFAVLGKMFGEAGDYDGIRYVLQEM 330
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K V P++ YN + + + +EM SG D LV IY A
Sbjct: 331 KSLGVQPNLVVYNTLLEAMGKAGKPGLARSLFEEM-VGSGVIPDAKTLTALVKIYGKARW 389
Query: 166 LVNAESSTLVEAEKSITQRQW----ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ-KMT 220
+A +E + + W I Y+ L+ + A LG +++ +++++ ++ ++ +
Sbjct: 390 ARDA-----LELWERMRSNGWPMDFILYNTLLSMCADLGLEEEAEKLFEDMKKSEHCRPD 444
Query: 221 SRNYICILSSYLMLGHLKEVGEIIDQ 246
S +Y +L+ Y G++ ++ D+
Sbjct: 445 SWSYTAMLNIYGSGGNVDRAMQLFDE 470
>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Cucumis sativus]
Length = 822
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 109/256 (42%), Gaps = 6/256 (2%)
Query: 35 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 94
+G P S TS AL+H GA +A + + + + L + + YN ++ + + G+
Sbjct: 482 KGSPASKVTS---NALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGK 538
Query: 95 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 154
VE + EE+ ++ + PDI+TYN + +D K DE SG + Y
Sbjct: 539 VEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFK-ASGLISNIHTYG 597
Query: 155 NLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM 214
++ Y A+ + + E + E + I Y+ +I + GN Q+ ++++
Sbjct: 598 IMMEGYCKANRIEDVE-NLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKS 656
Query: 215 TKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTE 274
Y ++ +G +++ +ID+ ++ ++ L+G + +G +
Sbjct: 657 KGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVP-NVVCYTALIGGYCKLGQMD 715
Query: 275 KANEFHMLLLQKNCAP 290
A + ++ N P
Sbjct: 716 TAESTWLEMISFNIHP 731
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 1/112 (0%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
YTAL+ Y + AE + + N+ N Y M+ Y +G +EK ++ ++K
Sbjct: 701 YTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMK 760
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 158
+VPD+ TYN+ + ++D K D+M+ + G D + Y LV+
Sbjct: 761 ESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATE-GLPVDEITYTTLVH 811
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 1/124 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY++L+H E A+ L + +++ N + Y ++ Y +GQ++ E+
Sbjct: 665 TYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEM 724
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
N+ P+ FTY + I N+++ L +M +SG D V Y L N + A+
Sbjct: 725 ISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMK-ESGIVPDVVTYNVLTNGFCKAND 783
Query: 166 LVNA 169
+ NA
Sbjct: 784 MDNA 787
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 83/226 (36%), Gaps = 44/226 (19%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
TY ++ Y A E E LF + + N+++YN ++ + G V ++E
Sbjct: 594 HTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLEN 653
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+K K ++P+ TY+ I ++ K +DEM + +V V
Sbjct: 654 MKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMR-----KEGFVPNV---------- 698
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK---SLRMTKQKMTS 221
+ Y LI Y LG D + W S + K T
Sbjct: 699 ----------------------VCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFT- 735
Query: 222 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAF 267
Y ++ Y LG++++ ++ + K+S D+ N L F
Sbjct: 736 --YTVMIDGYCKLGNMEKANNLLIKMKESGIVP-DVVTYNVLTNGF 778
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 89/206 (43%), Gaps = 13/206 (6%)
Query: 7 FVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEEL 66
F+LS A + +VF + S EG + ++T +++ E A EL
Sbjct: 214 FLLSSLVKANEFEKCCEVFRVMS-----EG---ACPDVFSFTNVINALCKGGKMENAIEL 265
Query: 67 FERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAA 126
F ++++ +S N + YN ++ G+++ + E++ K V P++ TY I+
Sbjct: 266 FMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIK 325
Query: 127 TLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQW 186
D+V LDEM SG + + V + NL++ Y ++ A V K+IT
Sbjct: 326 LNFFDKVNHVLDEMI-GSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSV 384
Query: 187 ITYDFLIILYAGLGNKDKIDQIWKSL 212
Y L G D+I+ +L
Sbjct: 385 TLYS----LMQGFCKSDQIEHAENAL 406
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 82/197 (41%), Gaps = 18/197 (9%)
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+ RK P + T N +SS ++ + MS G D + N++N
Sbjct: 200 LARKGTFPSLKTCNFLLSSLVKANEFEKCCEVFRVMS--EGACPDVFSFTNVINALCKGG 257
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN- 223
+ NA ++ EK +TY+ +I GL ++D ++ K+KMT +
Sbjct: 258 KMENA-IELFMKMEKLGISPNVVTYNCII---NGLCQNGRLDNAFE----LKEKMTVKGV 309
Query: 224 ------YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 277
Y +++ + L +V ++D+ S + ++ N L+ + +G E A
Sbjct: 310 QPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNP-NVVVFNNLIDGYCKMGNIEGAL 368
Query: 278 EFHMLLLQKNCAPTNAS 294
+ +++ KN PT+ +
Sbjct: 369 KIKDVMISKNITPTSVT 385
>gi|449457361|ref|XP_004146417.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g23020-like [Cucumis sativus]
Length = 858
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 73/146 (50%), Gaps = 9/146 (6%)
Query: 38 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 97
P + ++ TY L+ Y A ++A FE + + +S + +N M+ + + GQ+++
Sbjct: 310 PHVSLSTYTYNTLIDTYGKAGQLKEASTTFENMLKEGVSPTTVTFNTMIHICGNHGQLKE 369
Query: 98 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 157
V ++++++ PD TYN+ IS A NID + EM ++G D V Y L+
Sbjct: 370 VTFLMQKMEELQCPPDTRTYNILISLYAKHDNIDLASNYFAEME-EAGLQPDIVSYRTLL 428
Query: 158 NIYITASHLVNAESSTLVEAEKSITQ 183
Y + H+V EAEK IT+
Sbjct: 429 YAY-SIRHMV-------AEAEKLITE 446
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 102/248 (41%), Gaps = 5/248 (2%)
Query: 9 LSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAK-TSETYTALLHLYAGAKWTEKAEELF 67
+S Y+ ID + I ER F K T + ++ Y K KA+++F
Sbjct: 488 MSSECYSANIDAYGERGFILEAERVFVSCQEEKKCTVLEFNVMIKAYGVVKDYAKAQKIF 547
Query: 68 ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAAT 127
+ +K + + + Y+ ++ + +++++ +V D Y++ ISS +
Sbjct: 548 DSMKSNGVVPDKCSYSSLIQILTGADMPAMALAYLKKMQSAGLVSDCIPYSVVISSFSKL 607
Query: 128 LNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA-EKSITQRQW 186
+++ K EM G D + Y L+N + A + E+ V A ++
Sbjct: 608 GHLEMADKLYREM-VKHGVQPDIIVYGVLINAFADAGSV--KEAINYVNAMKRDGLSGNT 664
Query: 187 ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 246
+ Y+ LI LY +G + + +K L T + C++ Y +KE EI +
Sbjct: 665 VIYNSLIKLYTKVGYLKEAHEAYKMLEQTDDGPAIYSSNCMIDLYSERSMVKEAEEIFES 724
Query: 247 WKQSATSD 254
K+ ++
Sbjct: 725 LKKKGEAN 732
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Query: 18 IDLMTKVFGIHSGERYFEGLPLSAKTSE-TYTALLHLYAGAKWTEKAEELFERVKQSNLS 76
IDL ++ + E FE L + +E T+ +L +Y ++A + ++K+ L
Sbjct: 706 IDLYSERSMVKEAEEIFESLKKKGEANEFTFAMMLCMYKKIGRIQEAICVARQMKEQGLL 765
Query: 77 FNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTY 117
+ L +N M++LY G+ ++ + +E+ + V PD TY
Sbjct: 766 SDLLSFNNMISLYAMDGRFKEAVSIFQEMMKAAVQPDECTY 806
>gi|302791627|ref|XP_002977580.1| hypothetical protein SELMODRAFT_107283 [Selaginella moellendorffii]
gi|300154950|gb|EFJ21584.1| hypothetical protein SELMODRAFT_107283 [Selaginella moellendorffii]
Length = 555
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 95/210 (45%), Gaps = 10/210 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY+A++ LY A T +A +L++ ++++N + + + + +Y VG + + + ++
Sbjct: 97 TYSAMIDLYGKAGRTAEAMDLYQTMRKNNWKPDLVSFGVIANVYSRVGDYQAILRLFRDM 156
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
++ + P++ +N I + + K DEM+ G + L+++Y
Sbjct: 157 EQAEIKPNVVLFNTLIGTLGRAGKVTLAKGMFDEMAT-YGLEPSEITLSILIDMYTKVGA 215
Query: 166 LVNAESSTLVEAEKSITQRQW----ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 221
L A ++ +I Q++W + Y+ L+ GN + + + + M KQ
Sbjct: 216 LDKA-----LDVYDTIKQKKWKLDVLVYNTLLKSCVESGNIQRAESLIAEMEMEKQWPDH 270
Query: 222 RNYICILSSYLMLGHLKEVGEIIDQWKQSA 251
Y +++ Y G + EV + D+ K A
Sbjct: 271 MTYGILMNVYATKGMVAEVRAMFDKLKNLA 300
Score = 40.4 bits (93), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 39/205 (19%), Positives = 91/205 (44%), Gaps = 11/205 (5%)
Query: 57 AKWTEKAEEL---FERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPD 113
+K ++AE+ F R++++ +SF+ + Y+ M+ LY G+ + + + +++ N PD
Sbjct: 70 SKRCDRAEDAIAWFHRLRETGVSFDGVTYSAMIDLYGKAGRTAEAMDLYQTMRKNNWKPD 129
Query: 114 IFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESST 173
+ ++ + + + + + + +M + + V + L+ A + A+
Sbjct: 130 LVSFGVIANVYSRVGDYQAILRLFRDME-QAEIKPNVVLFNTLIGTLGRAGKVTLAKGMF 188
Query: 174 LVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLM 233
A + + IT LI +Y +G DK ++ +++ K K+ Y +L S +
Sbjct: 189 DEMATYGLEPSE-ITLSILIDMYTKVGALDKALDVYDTIKQKKWKLDVLVYNTLLKSCVE 247
Query: 234 LGHLKEVGEII------DQWKQSAT 252
G+++ +I QW T
Sbjct: 248 SGNIQRAESLIAEMEMEKQWPDHMT 272
>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 504
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 105/265 (39%), Gaps = 23/265 (8%)
Query: 26 GIHSGERYFEGLPLSAKTSE--------TYTALLHLYAGAKWTEKAEELFERVKQSNLSF 77
G G+R ++ L + + E Y ++ +K + A +L R++ +
Sbjct: 160 GFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRP 219
Query: 78 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFL 137
+A+ YN +++ + G+ + +V + ++ + PD+FT+N I +C I + ++
Sbjct: 220 DAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELY 279
Query: 138 DEM---SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLII 194
+EM S D D V Y L+ S L AE K +TY LI
Sbjct: 280 EEMIRRSLDP----DIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFP-DVVTYSILI- 333
Query: 195 LYAGLGNKDKIDQIWKSLRMTKQKMTSRN---YICILSSYLMLGHLKEVGEIIDQWKQSA 251
G K++ K Q+ RN Y ++ Y G L V E I +W
Sbjct: 334 --NGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKL-NVAEEIFKWMVFC 390
Query: 252 TSDFDISACNRLLGAFSDVGLTEKA 276
+I N LL D G EKA
Sbjct: 391 GVPPNIITYNVLLHGLCDNGKIEKA 415
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
+ + TYT L+ Y A AEE+F+ + + N + YN ++ G++EK +
Sbjct: 358 VRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALV 417
Query: 101 VVEEIKRKNVVPDIFTYNLWISS-CAA 126
++ ++++ + DI TYN+ I C A
Sbjct: 418 ILADMQKSGMDADIVTYNIIIRGMCKA 444
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 84/202 (41%), Gaps = 17/202 (8%)
Query: 16 TRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNL 75
+R+D ++FG + F + TY+ L++ Y +K E +LF + Q +
Sbjct: 305 SRLDEAEQMFGFMVSKGCFPDV-------VTYSILINGYCKSKKVEHGMKLFCEMSQRGV 357
Query: 76 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKR----KNVVPDIFTYNLWISSCAATLNID 131
N + Y ++ Y G++ V EEI + V P+I TYN+ + I+
Sbjct: 358 VRNTVTYTVLIQGYCRAGKLN----VAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIE 413
Query: 132 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 191
+ L +M SG D V Y ++ A + +A K +T W
Sbjct: 414 KALVILADMQ-KSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAM 472
Query: 192 LIILYAGLGNKDKIDQIWKSLR 213
++ LY G + + D +++ ++
Sbjct: 473 MLGLYKK-GLRGEADALFRKMK 493
>gi|449518091|ref|XP_004166077.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g23020-like [Cucumis sativus]
Length = 859
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 73/146 (50%), Gaps = 9/146 (6%)
Query: 38 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 97
P + ++ TY L+ Y A ++A FE + + +S + +N M+ + + GQ+++
Sbjct: 311 PHVSLSTYTYNTLIDTYGKAGQLKEASTTFENMLKEGVSPTTVTFNTMIHICGNHGQLKE 370
Query: 98 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 157
V ++++++ PD TYN+ IS A NID + EM ++G D V Y L+
Sbjct: 371 VTFLMQKMEELQCPPDTRTYNILISLYAKHDNIDLASNYFAEME-EAGLQPDIVSYRTLL 429
Query: 158 NIYITASHLVNAESSTLVEAEKSITQ 183
Y + H+V EAEK IT+
Sbjct: 430 YAY-SIRHMV-------AEAEKLITE 447
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 102/248 (41%), Gaps = 5/248 (2%)
Query: 9 LSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAK-TSETYTALLHLYAGAKWTEKAEELF 67
+S Y+ ID + I ER F K T + ++ Y K KA+++F
Sbjct: 489 MSSECYSANIDAYGERGFILEAERVFVSCQEEKKCTVLEFNVMIKAYGVVKDYAKAQKIF 548
Query: 68 ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAAT 127
+ +K + + + Y+ ++ + +++++ +V D Y++ ISS +
Sbjct: 549 DSMKSNGVVPDKCSYSSLIQILTGADMPAMALAYLKKMQSAGLVSDCIPYSVVISSFSKL 608
Query: 128 LNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA-EKSITQRQW 186
+++ K EM G D + Y L+N + A + E+ V A ++
Sbjct: 609 GHLEMADKLYREM-VKHGVQPDIIVYGVLINAFADAGSV--KEAINYVNAMKRDGLSGNT 665
Query: 187 ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 246
+ Y+ LI LY +G + + +K L T + C++ Y +KE EI +
Sbjct: 666 VIYNSLIKLYTKVGYLKEAHEAYKMLEQTDDGPAIYSSNCMIDLYSERSMVKEAEEIFES 725
Query: 247 WKQSATSD 254
K+ ++
Sbjct: 726 LKKKGEAN 733
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Query: 18 IDLMTKVFGIHSGERYFEGLPLSAKTSE-TYTALLHLYAGAKWTEKAEELFERVKQSNLS 76
IDL ++ + E FE L + +E T+ +L +Y ++A + ++K+ L
Sbjct: 707 IDLYSERSMVKEAEEIFESLKKKGEANEFTFAMMLCMYKKIGRIQEAICVARQMKEQGLL 766
Query: 77 FNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTY 117
+ L +N M++LY G+ ++ + +E+ + V PD TY
Sbjct: 767 SDLLSFNNMISLYAMDGRFKEAVSIFQEMMKAAVQPDECTY 807
>gi|449530353|ref|XP_004172160.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like, partial [Cucumis sativus]
Length = 312
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/249 (19%), Positives = 109/249 (43%), Gaps = 3/249 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+TAL++ A EKAEE+FE+++++ + YN +M Y G A + +
Sbjct: 33 TFTALVNALAREGLCEKAEEIFEQMQEAGYEPDVYAYNALMESYSRAGFPYGAAEIFSLM 92
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ PD +YN+ + + + + +EM G + ++ L++ Y +A +
Sbjct: 93 QHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEEMK-RIGITPTMKSHMLLLSAYSSAGN 151
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ E + + KS + + ++ LY LG K++ ++ +++ + Y
Sbjct: 152 VAKCE-DIIGQMHKSGLKPDTFVMNSMLNLYGRLGQFGKMEDLFSTMQKGPCRADISTYN 210
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 285
+++ Y G ++ + E+ Q + + D+ +GA+S L ++ E ++
Sbjct: 211 ILINVYGRAGFVERMEELF-QLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLELFEKMID 269
Query: 286 KNCAPTNAS 294
C P +
Sbjct: 270 AGCYPDGGT 278
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 95/235 (40%), Gaps = 17/235 (7%)
Query: 63 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 122
A+ +F+ ++ N + ++ G EK + E+++ PD++ YN +
Sbjct: 15 AQNIFDEMRTQRCKPNICTFTALVNALAREGLCEKAEEIFEQMQEAGYEPDVYAYNALME 74
Query: 123 S---CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK 179
S ++ + M C+ D Y +V+ Y A ++ ++ + E K
Sbjct: 75 SYSRAGFPYGAAEIFSLMQHMGCEP----DRASYNIMVDAYGRAG--LHEDAQAVFEEMK 128
Query: 180 SITQRQWITYDFLII-LYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLML-GHL 237
I + L++ Y+ GN K + I +M K + + +++S L L G L
Sbjct: 129 RIGITPTMKSHMLLLSAYSSAGNVAKCEDIIG--QMHKSGLKPDTF--VMNSMLNLYGRL 184
Query: 238 KEVGEIIDQWK--QSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
+ G++ D + Q DIS N L+ + G E+ E LL KN P
Sbjct: 185 GQFGKMEDLFSTMQKGPCRADISTYNILINVYGRAGFVERMEELFQLLPAKNLEP 239
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 1/106 (0%)
Query: 38 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 97
P A S TY L+++Y A + E+ EELF+ + NL + + + + Y ++
Sbjct: 201 PCRADIS-TYNILINVYGRAGFVERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKR 259
Query: 98 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCD 143
+ E++ PD T + +S+C++ I+QV + M D
Sbjct: 260 CLELFEKMIDAGCYPDGGTAKVLLSACSSEEQIEQVTNVVRTMHKD 305
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 42/81 (51%)
Query: 42 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 101
T +++ LL Y+ A K E++ ++ +S L + + N M+ LY +GQ K+ +
Sbjct: 134 PTMKSHMLLLSAYSSAGNVAKCEDIIGQMHKSGLKPDTFVMNSMLNLYGRLGQFGKMEDL 193
Query: 102 VEEIKRKNVVPDIFTYNLWIS 122
+++ DI TYN+ I+
Sbjct: 194 FSTMQKGPCRADISTYNILIN 214
>gi|225429339|ref|XP_002269471.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02860
[Vitis vinifera]
Length = 811
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 71/168 (42%), Gaps = 2/168 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T A++ +Y + KA E+ + +K+ + + YN +M +Y E+ ++ EI
Sbjct: 623 TLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSANFERSEEILREI 682
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K + PDI +YN I + + + L EM +SG + D + Y + Y S
Sbjct: 683 LAKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMR-ESGPAPDIITYNTFIASYAADSM 741
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 213
V A + Q TY+ ++ Y L +D+ +LR
Sbjct: 742 FVEAIDVVCYMIKHGCKPNQS-TYNSIVDWYCKLNRRDEASMFVNNLR 788
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/246 (17%), Positives = 107/246 (43%), Gaps = 5/246 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY ALL +Y ++ +++A E+ + ++ + + + YN +++ Y G +E + ++
Sbjct: 308 TYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLISAYARDGLLEDALELKNQM 367
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K + PD+FTY +S + +EM + G + + L+ ++
Sbjct: 368 VEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMR-NEGCKPNICTFNALIKMHGNRGK 426
Query: 166 LVNAESSTLVEAEKSI-TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
E + E K+ +T++ L+ ++ G ++ ++K ++ +
Sbjct: 427 FT--EMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTF 484
Query: 225 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 284
++SSY G + + + ++ + D+S+ N +L A + GL +++ + +
Sbjct: 485 NTLISSYSRCGSFDQAMAVYKRMLEAGVNP-DLSSYNAVLAALARGGLWKQSEKVLAEMK 543
Query: 285 QKNCAP 290
C P
Sbjct: 544 DGRCKP 549
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 95/227 (41%), Gaps = 4/227 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV-EKVALVVEE 104
YT+++ + +A +F+++++ + YN ++ +Y +G K+ +V+
Sbjct: 202 AYTSMITAFTSNGRYREAVMVFKKMEEVGCKPTLITYNVILNVYGKMGMPWNKMVGLVDR 261
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+K + PD +TYN IS C ++ L EM +G S D V Y L+++Y S
Sbjct: 262 MKSAGIAPDSYTYNTLISCCRRGNLYEEAAGVLKEMKL-AGFSPDKVTYNALLDVY-GKS 319
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
L E E + +TY+ LI YA G + ++ + K Y
Sbjct: 320 RRSKEAMEVLQEMEGNGCPPSIVTYNSLISAYARDGLLEDALELKNQMVEKGIKPDVFTY 379
Query: 225 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 271
+LS + G K +I ++ + +I N L+ + G
Sbjct: 380 TTLLSGFEKAGKDKAAVQIFEEMRNEGCKP-NICTFNALIKMHGNRG 425
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 103/254 (40%), Gaps = 14/254 (5%)
Query: 29 SGERYFEGLPLSAKTSE--------TYTALLHLYA--GAKWTEKAEELFERVKQSNLSFN 78
S RY E + + K E TY +L++Y G W K L +R+K + ++ +
Sbjct: 212 SNGRYREAVMVFKKMEEVGCKPTLITYNVILNVYGKMGMPWN-KMVGLVDRMKSAGIAPD 270
Query: 79 ALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLD 138
+ YN +++ E+ A V++E+K PD TYN + + + + L
Sbjct: 271 SYTYNTLISCCRRGNLYEEAAGVLKEMKLAGFSPDKVTYNALLDVYGKSRRSKEAMEVLQ 330
Query: 139 EMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAG 198
EM +G V Y +L++ Y L +A EK I + TY L+ +
Sbjct: 331 EME-GNGCPPSIVTYNSLISAYARDGLLEDALELKNQMVEKGI-KPDVFTYTTLLSGFEK 388
Query: 199 LGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDIS 258
G QI++ +R K + ++ + G E+ ++ + K S DI
Sbjct: 389 AGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQCSP-DIV 447
Query: 259 ACNRLLGAFSDVGL 272
N LL F G+
Sbjct: 448 TWNTLLSVFGQNGM 461
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 75/188 (39%), Gaps = 37/188 (19%)
Query: 46 TYTALLHLYAGAKWTEK----AEELF---------------------------ER----V 70
TY +LLH YA K E+ AEE++ ER +
Sbjct: 553 TYCSLLHAYANGKEIERMCALAEEIYSGIIEPRAVLLKTLVLVNSKCDLLMETERAFLEL 612
Query: 71 KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 130
+Q S + N M+++Y V K +++ +KR P + TYN + + + N
Sbjct: 613 RQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSANF 672
Query: 131 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 190
++ ++ L E+ G D + Y ++ Y + +A S L E +S ITY+
Sbjct: 673 ERSEEILREI-LAKGIRPDIISYNTVIYAYCRNGRMRDA-SRVLSEMRESGPAPDIITYN 730
Query: 191 FLIILYAG 198
I YA
Sbjct: 731 TFIASYAA 738
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 52/253 (20%), Positives = 105/253 (41%), Gaps = 9/253 (3%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
A S TY L+ E+A + + +K + S + + YN ++ +Y + ++
Sbjct: 268 APDSYTYNTLISCCRRGNLYEEAAGVLKEMKLAGFSPDKVTYNALLDVYGKSRRSKEAME 327
Query: 101 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
V++E++ P I TYN IS+ A ++ + ++M + G D Y L++ +
Sbjct: 328 VLQEMEGNGCPPSIVTYNSLISAYARDGLLEDALELKNQM-VEKGIKPDVFTYTTLLSGF 386
Query: 161 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 220
A A E + T++ LI ++ GN+ K ++ K K
Sbjct: 387 EKAGK-DKAAVQIFEEMRNEGCKPNICTFNALIKMH---GNRGKFTEMMKVFEDIKTFQC 442
Query: 221 SRNYI---CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 277
S + + +LS + G EV + + K++ + N L+ ++S G ++A
Sbjct: 443 SPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVP-ERDTFNTLISSYSRCGSFDQAM 501
Query: 278 EFHMLLLQKNCAP 290
+ +L+ P
Sbjct: 502 AVYKRMLEAGVNP 514
>gi|297853022|ref|XP_002894392.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297340234|gb|EFH70651.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 525
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 81/191 (42%), Gaps = 9/191 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
Y ALL + + A ++F+ + L +A + + Y V V++ +
Sbjct: 245 AYNALLDALCKSGDVDGAYKMFQEMGNLGLKPDAYSFAIFIHSYCDASDVHSAYQVLDRM 304
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
KR ++VP+++T+N I + +D LDEM D W N + Y
Sbjct: 305 KRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWT--YNSIMAYHCDHC 362
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
VN + L +++ TY+ ++ L +G D++ +IW+ M+ R +
Sbjct: 363 EVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRVTEIWEG-------MSERKFY 415
Query: 226 CILSSYLMLGH 236
+++Y ++ H
Sbjct: 416 PTVATYTVMIH 426
Score = 37.4 bits (85), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 51/120 (42%), Gaps = 1/120 (0%)
Query: 50 LLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKN 109
LLH K A+E F++ K + +A Y+ ++ + + V +E+ N
Sbjct: 179 LLHSLCDRKHVNHAQEFFDKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLENN 238
Query: 110 VVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 169
V D+ YN + + + ++D K EM + G D + ++ Y AS + +A
Sbjct: 239 CVVDLLAYNALLDALCKSGDVDGAYKMFQEMG-NLGLKPDAYSFAIFIHSYCDASDVHSA 297
>gi|125535459|gb|EAY81947.1| hypothetical protein OsI_37125 [Oryza sativa Indica Group]
Length = 697
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 93/206 (45%), Gaps = 6/206 (2%)
Query: 78 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVV-----PDIFTYNLWISSCAATLNIDQ 132
N+ +Y +M YM+ G+VE V ++ ++R+ PD TY IS+ A ++++
Sbjct: 350 NSRVYTTLMKGYMNAGRVEDVVAMLRAMRREGETSPASRPDHVTYTTVISTLVAAGDMER 409
Query: 133 VKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFL 192
+ L+EM +G + V Y L+ Y A+ V+ ++ Q +TY+ L
Sbjct: 410 ARAVLEEMG-QAGVAASRVTYNVLIKGYCQQLQAGKAKELLAVDMAEAGIQPDVVTYNTL 468
Query: 193 IILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSAT 252
I + ++ +R ++ +Y ++ ++ G K ++ D+ ++
Sbjct: 469 IDGCVLTDDSAGAVALFNEMRERGIAPSAVSYTTLMKAFAASGQPKLAHKVFDEMEKDPR 528
Query: 253 SDFDISACNRLLGAFSDVGLTEKANE 278
D +A N L+ A+ +GL E A +
Sbjct: 529 VAVDRAAWNMLVEAYCRLGLLESAKK 554
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 102/272 (37%), Gaps = 21/272 (7%)
Query: 31 ERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYM 90
R E P S TYT ++ A E+A + E + Q+ ++ + + YN ++ Y
Sbjct: 378 RREGETSPASRPDHVTYTTVISTLVAAGDMERARAVLEEMGQAGVAASRVTYNVLIKGYC 437
Query: 91 SVGQVEKVA-LVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDD 149
Q K L+ ++ + PD+ TYN I C T + +EM + G +
Sbjct: 438 QQLQAGKAKELLAVDMAEAGIQPDVVTYNTLIDGCVLTDDSAGAVALFNEMR-ERGIAPS 496
Query: 150 WVKYVNLVNIYITASHLVNAESSTLVEAEK----SITQRQWITYDFLIILYAGLGNKDKI 205
V Y L+ + AS E EK ++ + W + L+ Y LG
Sbjct: 497 AVSYTTLMKAF-AASGQPKLAHKVFDEMEKDPRVAVDRAAW---NMLVEAYCRLG----- 547
Query: 206 DQIWKSLRMTKQKMTSRNYICILSSYLMLGH----LKEVGEIIDQWKQSATSDFDISACN 261
+ +S + ++M +R +++Y L + GE + W++ + D
Sbjct: 548 --LLESAKKVVERMKARGVQPDVATYGSLAKGIAVARRPGEALLLWEEIKEKEVDGEVVE 605
Query: 262 RLLGAFSDVGLTEKANEFHMLLLQKNCAPTNA 293
L L KA E + + P A
Sbjct: 606 ALADVCVRAALFRKALEMVARMEEMGVEPNKA 637
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 43/222 (19%), Positives = 90/222 (40%), Gaps = 11/222 (4%)
Query: 37 LPLSAKT----SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNA-----LMYNEMMT 87
+PL K S YT L+ Y A E + +++ + A + Y +++
Sbjct: 340 VPLLPKAYPPNSRVYTTLMKGYMNAGRVEDVVAMLRAMRREGETSPASRPDHVTYTTVIS 399
Query: 88 LYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGS 147
++ G +E+ V+EE+ + V TYN+ I L + K+ L ++G
Sbjct: 400 TLVAAGDMERARAVLEEMGQAGVAASRVTYNVLIKGYCQQLQAGKAKELLAVDMAEAGIQ 459
Query: 148 DDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQ 207
D V Y L++ + A + E+ I ++Y L+ +A G +
Sbjct: 460 PDVVTYNTLIDGCVLTDDSAGAVALFNEMRERGIAP-SAVSYTTLMKAFAASGQPKLAHK 518
Query: 208 IWKSLRMTKQKMTSR-NYICILSSYLMLGHLKEVGEIIDQWK 248
++ + + R + ++ +Y LG L+ +++++ K
Sbjct: 519 VFDEMEKDPRVAVDRAAWNMLVEAYCRLGLLESAKKVVERMK 560
>gi|356547408|ref|XP_003542104.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Glycine max]
Length = 631
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY+AL+ +A + A LF+ +K++ L A +Y +M +Y VG+VE+ +V+E+
Sbjct: 226 TYSALISAFAKLNRDDSAIRLFDEMKENGLQPTAKIYTTLMGIYFKVGKVEEALGLVKEM 285
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ + + +FTY I + ++ M D G D V NL+NI ++H
Sbjct: 286 RARRCLLTVFTYTELIRGLGKSGRVEDAYMTYKNMLKD-GCKPDVVLMNNLINILGRSNH 344
Query: 166 LVNA 169
L +A
Sbjct: 345 LRDA 348
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 98/235 (41%), Gaps = 10/235 (4%)
Query: 46 TYTALLH-LYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
TY ++ L+ +A FER+K+ + ++ Y+ ++ Y +VEK L++EE
Sbjct: 366 TYNTIIKSLFEAKAPLSEASSWFERMKKDGIVPSSFTYSILIDGYCKTNRVEKALLLLEE 425
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+ K P Y I++ D + E+ + G S V Y ++ +
Sbjct: 426 MDEKGFPPCPAAYCSLINTLGVAKRYDVANELFQELKENCGCSSARV-YAVMIKHFGKCG 484
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN- 223
L N + E +K Y+ L+ G+ +++D+ + R ++ + +
Sbjct: 485 RL-NEAINLFNEMKKLGCTPDVYAYNALM---TGMVRAERMDEAFSLFRTMEENGCTPDI 540
Query: 224 --YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
+ IL+ G K E+ + K S T D+ + N +LG S GL E+A
Sbjct: 541 NSHNIILNGLARTGGPKGALEMFTKMKNS-TIKPDVVSFNTILGCLSRAGLFEEA 594
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 88/205 (42%), Gaps = 9/205 (4%)
Query: 48 TALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV-ALVVEEIK 106
+ ++ + AK +A +F +VK A YN ++ + M G EKV L E
Sbjct: 157 SEIVRILGKAKMVNRALSVFYQVKGRKCRPTASTYNSIILMLMQEGHHEKVHELYNEMCS 216
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
+ PD TY+ IS+ A D + DEM ++G Y L+ IY +
Sbjct: 217 EVHCFPDTVTYSALISAFAKLNRDDSAIRLFDEMK-ENGLQPTAKIYTTLMGIYFKVGKV 275
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 226
E+ LV+ ++ +R +T L GLG +++ + + + + + +
Sbjct: 276 --EEALGLVKEMRA--RRCLLTVFTYTELIRGLGKSGRVEDAYMTYKNMLKDGCKPDVVL 331
Query: 227 ILSSYLMLG---HLKEVGEIIDQWK 248
+ + +LG HL++ ++ D+ K
Sbjct: 332 MNNLINILGRSNHLRDAIKLFDEMK 356
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 55/110 (50%), Gaps = 2/110 (1%)
Query: 50 LLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMM-TLYMSVGQVEKVALVVEEIKRK 108
L+++ + A +LF+ +K N + N + YN ++ +L+ + + + + E +K+
Sbjct: 335 LINILGRSNHLRDAIKLFDEMKLLNCAPNVVTYNTIIKSLFEAKAPLSEASSWFERMKKD 394
Query: 109 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 158
+VP FTY++ I T +++ L+EM + G Y +L+N
Sbjct: 395 GIVPSSFTYSILIDGYCKTNRVEKALLLLEEMD-EKGFPPCPAAYCSLIN 443
>gi|255580124|ref|XP_002530894.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529547|gb|EEF31500.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 519
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 75/167 (44%), Gaps = 2/167 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
Y +LL + +A ++F + + + +A ++ + Y + V++E+
Sbjct: 250 AYNSLLEAFCKGGKVSEAYKMFREMGSNGIKPDACTFSIFIRAYCEANDIHLAYRVLDEM 309
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
KR ++VP++FTYN I +++ + L+E+ SG D W N + Y
Sbjct: 310 KRYDLVPNVFTYNCMIKKLCKKEKVEEAYQLLNEIIERSGQPDAWS--YNAILAYHCEHS 367
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 212
VN+ + + K +Y+ L+ L +G D+ ++W+S+
Sbjct: 368 EVNSATRLISRMVKDNCLPDKHSYNMLLKLLIRVGRFDRAIEVWESM 414
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/97 (20%), Positives = 49/97 (50%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
++TY+ L+ + + A ++F+ +++ + + L YN ++ + G+V + +
Sbjct: 213 AKTYSILVRGWGDIGESVSACKVFDEMREQQCAVDVLAYNSLLEAFCKGGKVSEAYKMFR 272
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
E+ + PD T++++I + +I + LDEM
Sbjct: 273 EMGSNGIKPDACTFSIFIRAYCEANDIHLAYRVLDEM 309
>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Glycine max]
Length = 852
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 82/199 (41%), Gaps = 2/199 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY ++ A E A LFE +K L + + YN ++ Y VG + V EE+
Sbjct: 253 TYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEM 312
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K PD+ TYN I+ I Q ++L M G + V Y L++ + A
Sbjct: 313 KDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMK-QRGLQPNVVTYSTLIDAFCKAGM 371
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
L+ A + V+ + Q TY LI +G+ ++ ++ ++ + Y
Sbjct: 372 LLEA-NKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYT 430
Query: 226 CILSSYLMLGHLKEVGEII 244
+L G ++E E+
Sbjct: 431 ALLDGLCEDGRMREAEELF 449
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 98/241 (40%), Gaps = 13/241 (5%)
Query: 50 LLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKN 109
LLH + + A F+ + + LS + YN ++ G +E + EE+K K
Sbjct: 222 LLHRLSKSSKGGLALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKG 281
Query: 110 VVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 169
+ PDI TYN I + +EM D+G D + Y +L+N + + A
Sbjct: 282 LRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMK-DAGCEPDVITYNSLINCFCKFERIPQA 340
Query: 170 ESSTLVEAEKSITQRQWITYDFLIILYAGLG-----NKDKIDQIWKSLRMTKQKMTSRNY 224
++ + Q +TY LI + G NK +D I L+ + TS
Sbjct: 341 FEYLHGMKQRGL-QPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTS--- 396
Query: 225 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 284
++ + +G L E ++ + +Q+ + +I LL + G +A E LL
Sbjct: 397 --LIDANCKIGDLNEAFKLESEMQQAGV-NLNIVTYTALLDGLCEDGRMREAEELFGALL 453
Query: 285 Q 285
+
Sbjct: 454 K 454
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 2/148 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYTALL +AEELF + ++ + N +Y + Y+ +EK ++EE+
Sbjct: 428 TYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEM 487
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+KN+ PD+ Y I I+ + EM D G + + Y L++ Y
Sbjct: 488 NKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMM-DCGLTANSYIYTTLIDAYFKVGK 546
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLI 193
A + L E + + +TY LI
Sbjct: 547 TTEA-VNLLQEMQDLGIKITVVTYGVLI 573
Score = 44.7 bits (104), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 50/246 (20%), Positives = 96/246 (39%), Gaps = 16/246 (6%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
S YT L+ Y T +A L + ++ + + Y ++ +G V++ +
Sbjct: 531 SYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFD 590
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
+ R + P+I Y I +++ K +EM D G S D + Y +L++
Sbjct: 591 HMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEM-LDKGISPDKLVYTSLID--GNM 647
Query: 164 SHLVNAESSTLVEAEKSI-TQRQWITYDFLIILYAGLGN----KDKIDQIWKSLRMTKQK 218
H E+ +L I + Y LI ++ G K +D++ + + Q
Sbjct: 648 KHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQV 707
Query: 219 MTSRNYICILSSYLMLGHLKEVGEIIDQWKQ----SATSDFDISACNRLLGAFSDVGLTE 274
+ IC+L Y LG + E + D + S T D + +C + + ++
Sbjct: 708 LC----ICLLRKYYELGDINEALALHDDMARRGLISGTIDITVPSCLTAVTKLHKLCASQ 763
Query: 275 KANEFH 280
+FH
Sbjct: 764 SGTDFH 769
>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1084
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 68/136 (50%), Gaps = 10/136 (7%)
Query: 82 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS-CAATLNIDQVKKFLDEM 140
Y++++ +VEK + EE+KR +VP ++TY + I S C A L I Q +K+ DEM
Sbjct: 463 YSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGL-IQQARKWFDEM 521
Query: 141 SCDSGGSDDWVKYVNLVNIYITASHLVNAE---SSTLVEAEKSITQRQWITYDFLIILYA 197
G + + V Y L++ Y+ A + A+ L+E K +TY LI +
Sbjct: 522 -LHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKP----NVVTYTALIDGHC 576
Query: 198 GLGNKDKIDQIWKSLR 213
G +K QI+ +R
Sbjct: 577 KAGQIEKACQIYARMR 592
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/300 (19%), Positives = 113/300 (37%), Gaps = 31/300 (10%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVK 71
Y ID K I ++F+ + T TYTAL+H Y AK A+ELFE +
Sbjct: 498 YTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMML 557
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK---------------RKNVV-PDIF 115
N + Y ++ + GQ+EK + ++ N P++
Sbjct: 558 LEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVI 617
Query: 116 TYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLV 175
TY + + + + LD M G + + Y +++ + L +A+
Sbjct: 618 TYGALVDGLCKANRVKEAHELLDTMLA-HGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTK 676
Query: 176 EAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLG 235
+E+ + + F+ L+ +++D + K L + + N + M+
Sbjct: 677 MSERGYSPNLYTYSSFIDCLF----KDNRLDLVLKVLSKMLENSCTPNVVIYTE---MVD 729
Query: 236 HLKEVGEIIDQWK-----QSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
L ++G+ + +K + + ++ ++ F G E+ E + K CAP
Sbjct: 730 GLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAP 789
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 47/94 (50%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
YT ++ T++A +L ++++ + N + Y M+ + G++E+ + ++
Sbjct: 724 YTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMC 783
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
K P+ TY + I+ C + +D+ K LDEM
Sbjct: 784 SKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEM 817
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 59/311 (18%), Positives = 122/311 (39%), Gaps = 35/311 (11%)
Query: 5 KEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEK 62
K FV DS Y+ I + + FE + + + TYT L+ + A ++
Sbjct: 454 KGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQ 513
Query: 63 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 122
A + F+ + + N + Y ++ Y+ Q+ + E + + P++ TY I
Sbjct: 514 ARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALID 573
Query: 123 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL-------VNIYITASHLVNA--ESST 173
I++ + M D S D KY L N+ IT LV+ +++
Sbjct: 574 GHCKAGQIEKACQIYARMRGDIESS-DMDKYFKLDHNNCEGPNV-ITYGALVDGLCKANR 631
Query: 174 LVEAEKSI-------TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 226
+ EA + + + I YD +I + +G +++ KM+ R Y
Sbjct: 632 VKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVF-------TKMSERGYSP 684
Query: 227 ILSSYLML-------GHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 279
L +Y L V +++ + +++ + ++ ++ +G T++A +
Sbjct: 685 NLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTP-NVVIYTEMVDGLCKIGKTDEAYKL 743
Query: 280 HMLLLQKNCAP 290
+ + +K C P
Sbjct: 744 MLKMEEKGCNP 754
>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05670, mitochondrial; Flags: Precursor
gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
Length = 741
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 108/250 (43%), Gaps = 7/250 (2%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
S Y +++ L +AEE F + + + + ++Y ++ + G + +
Sbjct: 316 SYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFY 375
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
E+ +++ PD+ TY IS ++ + K EM C G D V + L+N Y A
Sbjct: 376 EMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFC-KGLEPDSVTFTELINGYCKA 434
Query: 164 SHLVNA--ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 221
H+ +A + +++A S +TY LI G+ D +++ + +
Sbjct: 435 GHMKDAFRVHNHMIQAGCS---PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNI 491
Query: 222 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 281
Y I++ G+++E +++ ++ ++A + D L+ A+ G +KA E
Sbjct: 492 FTYNSIVNGLCKSGNIEEAVKLVGEF-EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILK 550
Query: 282 LLLQKNCAPT 291
+L K PT
Sbjct: 551 EMLGKGLQPT 560
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 42/233 (18%), Positives = 96/233 (41%), Gaps = 3/233 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+Y ++H ++A L ++ + + + Y+ ++ Y G+++KV ++E +
Sbjct: 248 SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 307
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
KRK + P+ + Y I + + ++ EM G D V Y L++ +
Sbjct: 308 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEM-IRQGILPDTVVYTTLIDGFCKRGD 366
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ A S E +TY +I + +G+ + +++ + + S +
Sbjct: 367 -IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFT 425
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 278
+++ Y GH+K+ + + Q+ S ++ L+ G + ANE
Sbjct: 426 ELINGYCKAGHMKDAFRVHNHMIQAGCSP-NVVTYTTLIDGLCKEGDLDSANE 477
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 50/272 (18%), Positives = 104/272 (38%), Gaps = 11/272 (4%)
Query: 25 FGI-HSGERYFE-----GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFN 78
FG+ R FE GL LS + Y L L T A +F + + +N
Sbjct: 188 FGLLREARRVFEKMLNYGLVLSVDSCNVY--LTRLSKDCYKTATAIIVFREFPEVGVCWN 245
Query: 79 ALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLD 138
YN ++ +G++++ ++ ++ K PD+ +Y+ ++ +D+V K ++
Sbjct: 246 VASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIE 305
Query: 139 EMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAG 198
M + ++ Y +++ + L AE + E + + Y LI +
Sbjct: 306 VMKRKGLKPNSYI-YGSIIGLLCRICKLAEAEEA-FSEMIRQGILPDTVVYTTLIDGFCK 363
Query: 199 LGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDIS 258
G+ + + + Y I+S + +G + E G++ + D
Sbjct: 364 RGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEP-DSV 422
Query: 259 ACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
L+ + G + A H ++Q C+P
Sbjct: 423 TFTELINGYCKAGHMKDAFRVHNHMIQAGCSP 454
Score = 40.8 bits (94), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 58/136 (42%), Gaps = 2/136 (1%)
Query: 34 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 93
FE L+A T TYT L+ Y + +KA+E+ + + L + +N +M + G
Sbjct: 517 FEAAGLNADTV-TYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHG 575
Query: 94 QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKY 153
+E ++ + K + P+ T+N + N+ +M C G D Y
Sbjct: 576 MLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDM-CSRGVGPDGKTY 634
Query: 154 VNLVNIYITASHLVNA 169
NLV + A ++ A
Sbjct: 635 ENLVKGHCKARNMKEA 650
>gi|15219049|ref|NP_175673.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207559|sp|Q9SSR6.1|PPR78_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g52640, mitochondrial; Flags: Precursor
gi|5903042|gb|AAD55601.1|AC008016_11 Contains 2 PF|01535 DUF domains [Arabidopsis thaliana]
gi|45773940|gb|AAS76774.1| At1g52640 [Arabidopsis thaliana]
gi|62320530|dbj|BAD95108.1| hypothetical protein [Arabidopsis thaliana]
gi|332194712|gb|AEE32833.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 80/191 (41%), Gaps = 9/191 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
Y ALL + + ++F+ + L +A + + Y G V V++ +
Sbjct: 245 AYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRM 304
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
KR ++VP+++T+N I + +D LDEM D W N + Y
Sbjct: 305 KRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWT--YNSIMAYHCDHC 362
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
VN + L +++ TY+ ++ L +G D+ +IW+ M+ R +
Sbjct: 363 EVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEG-------MSERKFY 415
Query: 226 CILSSYLMLGH 236
+++Y ++ H
Sbjct: 416 PTVATYTVMIH 426
>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 807
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/257 (18%), Positives = 115/257 (44%), Gaps = 8/257 (3%)
Query: 35 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 94
+G+P + T Y +++H A+ +KA+ + ++ + + + + YN ++ Y ++GQ
Sbjct: 240 QGVPPNVVT---YNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQ 296
Query: 95 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 154
++ + +E+ + V+P+ T + +++ I++ ++F D M G + + Y
Sbjct: 297 WKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSM-LAKGHKLNIISYS 355
Query: 155 NLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM 214
L++ Y TA LV+ + + I Q + ++ L+ YA G + I++ ++
Sbjct: 356 TLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHV-FNILVNGYAKCGMVREAMFIFEDMQK 414
Query: 215 TKQKMTSRNYICILSSYLMLGHLKEVGEIIDQW-KQSATSDFDISACNRLLGAFSDVGLT 273
Y+ ++ ++ +G + + + + + +F + C L+ F G
Sbjct: 415 RGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQC--LIQGFCTHGDL 472
Query: 274 EKANEFHMLLLQKNCAP 290
KA E + K P
Sbjct: 473 VKAEELVYEIRNKGLGP 489
>gi|242076206|ref|XP_002448039.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
gi|241939222|gb|EES12367.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
Length = 481
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 60/117 (51%), Gaps = 10/117 (8%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 102
T+ TYT+L++ ++ ++ + LF+ + + + +MYN ++ + + G +E+ ++
Sbjct: 323 TAVTYTSLIYAFSRKGQVQETDRLFKVAVKKGIRPDVVMYNALINSHCAGGDMERAFEIM 382
Query: 103 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS----------CDSGGSDD 149
E+++K + PD TYN I +D+ + +DEM+ C +G DD
Sbjct: 383 AEMEKKRIPPDDVTYNTLIRGFCLLGRLDEARGLIDEMTKRGIQPDLGLCKNGQGDD 439
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 92/220 (41%), Gaps = 3/220 (1%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
A ++ Y AL+ Y + A + E + Q ++ YN ++ G+
Sbjct: 216 APSAVMYNALIGGYCDRGKLDVALQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAYA 275
Query: 101 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
V+EE++R + PD+FTYN+ I+ N + + +EMS G V Y +L+ +
Sbjct: 276 VLEEMQRNGLSPDVFTYNILINGYCKEGNEKKALEVFEEMS-RKGVRATAVTYTSLIYAF 334
Query: 161 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 220
+ + V +K I + + Y+ LI + G+ ++ +I + +
Sbjct: 335 SRKGQVQETDRLFKVAVKKGI-RPDVVMYNALINSHCAGGDMERAFEIMAEMEKKRIPPD 393
Query: 221 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 260
Y ++ + +LG L E +ID+ + D+ C
Sbjct: 394 DVTYNTLIRGFCLLGRLDEARGLIDEMTKRGIQP-DLGLC 432
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 115/293 (39%), Gaps = 43/293 (14%)
Query: 37 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 96
LPL T L HL A K +A EL ++ + N A+ YN ++ + + G+V+
Sbjct: 112 LPLCTTTFNIM--LRHLCATGKPV-RALELLRQMPRPN----AVTYNTVIAGFCARGRVQ 164
Query: 97 KVALVVEEIK-RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM--------------- 140
V+ E++ R + PD +TY IS ++ K DEM
Sbjct: 165 AALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAAKVFDEMLTQGEVAPSAVMYNA 224
Query: 141 ----SCDSGGSDDWVKY------------VNLVNIYITASHLVNAES---STLVEAEKSI 181
CD G D ++Y V N+ + A + S + L E +++
Sbjct: 225 LIGGYCDRGKLDVALQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQRNG 284
Query: 182 TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVG 241
TY+ LI Y GN+ K ++++ + + T+ Y ++ ++ G ++E
Sbjct: 285 LSPDVFTYNILINGYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQETD 344
Query: 242 EIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
+ + D+ N L+ + G E+A E + +K P + +
Sbjct: 345 RLFKVAVKKGIRP-DVVMYNALINSHCAGGDMERAFEIMAEMEKKRIPPDDVT 396
>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 104/247 (42%), Gaps = 5/247 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSN--LSFNALMYNEMMTLYMSVGQVEKVALVVE 103
+Y+ +L +++A +LF+ + + S N + YN ++ + G+ K +
Sbjct: 230 SYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFH 289
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
E+ R+ V PD+ TYNL I + +D+ + L +M+ +G D V Y +++ Y T
Sbjct: 290 EMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMT-TNGAQPDTVTYNCMIHGYATL 348
Query: 164 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 223
L A + + I FL L G + +I+ S+ K +
Sbjct: 349 GRLKEAAKMFRKMKSRGLIPNIVICNSFLASL-CKHGRSKEAAEIFDSMTAKGHKPDIVS 407
Query: 224 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 283
Y +L Y G ++ + + K + + D N L+ A++ G+ + A +
Sbjct: 408 YCTLLHGYASEGWFADMIGLFNSMKSNGIAA-DCRVFNILIHAYAKRGMVDDAMLIFTEM 466
Query: 284 LQKNCAP 290
Q+ +P
Sbjct: 467 QQQGVSP 473
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/204 (19%), Positives = 90/204 (44%), Gaps = 3/204 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+Y LLH YA W LF +K + ++ + ++N ++ Y G V+ L+ E+
Sbjct: 407 SYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEM 466
Query: 106 KRKNVVPDIFTYNLWISSCAATLNI-DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+++ V PD+ TY+ IS+ + + D ++KF ++ G + Y +++ +
Sbjct: 467 QQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVA--RGIQPNTAVYHSIIQGFCMHG 524
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
LV A+ K I + + ++ +I G I+ + ++ +
Sbjct: 525 GLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITF 584
Query: 225 ICILSSYLMLGHLKEVGEIIDQWK 248
++ Y ++G + + +I+D +
Sbjct: 585 TSLIDGYCLVGKMDKAFKILDAME 608
>gi|356551964|ref|XP_003544342.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 551
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/241 (19%), Positives = 110/241 (45%), Gaps = 9/241 (3%)
Query: 18 IDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSF 77
+++ +K I + + F+G+ S + T+ AL+ YA EK EL +++++
Sbjct: 311 VEMYSKCQDIVAAQMAFDGV--SERDLPTWNALISGYARCNQAEKIRELHQKMRRDGFEP 368
Query: 78 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFL 137
N +N ++ Y+ Q + + E++ N+ PDI+T + +++C+ I + K+ +
Sbjct: 369 NVYTWNGIIAGYVENKQYDSAMQLFTEMQIANLRPDIYTVGIILAACSRLATIQRGKQ-V 427
Query: 138 DEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYA 197
S +G D LV++Y + I+ ++++ ++ YA
Sbjct: 428 HAYSIRAGHDSDVHIGAALVDMYAKC-----GDVKHCYRVYNMISNPNLVSHNAMLTAYA 482
Query: 198 GLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDI 257
G+ ++ +++ + +K + ++ +LSS + G L E+G S+T ++
Sbjct: 483 MHGHGEEGIALFRRMLASKVRPDHVTFLAVLSSCVHAGSL-EIGHECLALMASSTKHMNL 541
Query: 258 S 258
S
Sbjct: 542 S 542
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 85/175 (48%), Gaps = 6/175 (3%)
Query: 39 LSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV 98
S K++ +Y A++ Y KA+ELF+R++Q + + + +N M++ Y+ ++
Sbjct: 194 FSRKSAASYNAMIAGYWENGNLFKAKELFDRMEQEGVQKDRISWNSMISGYVDGSLFDEA 253
Query: 99 ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 158
+ ++ ++ + PD FT ++ CA +I + K+ ++ G + + LV
Sbjct: 254 YSLFRDLLKEGIEPDSFTLGSVLAGCADMASIRRGKE-AHSLAIVRGLQSNSIVGGALVE 312
Query: 159 IYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 213
+Y +V A+ A +++R T++ LI YA +KI ++ + +R
Sbjct: 313 MYSKCQDIVAAQM-----AFDGVSERDLPTWNALISGYARCNQAEKIRELHQKMR 362
>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 657
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 61/116 (52%), Gaps = 1/116 (0%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 102
+ + + +++ +Y E+A E+F R+K+ + +YN ++ + +++ + +V
Sbjct: 109 SEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVY 168
Query: 103 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 158
++KR P++FTYN+ + + +D KK L EMS + G + V Y +++
Sbjct: 169 RDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMS-NKGCCPNAVSYTTVIS 223
>gi|15232008|ref|NP_187518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207466|sp|Q9SS81.1|PP221_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09060
gi|5923671|gb|AAD56322.1|AC009326_9 hypothetical protein [Arabidopsis thaliana]
gi|332641194|gb|AEE74715.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 687
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 105/243 (43%), Gaps = 2/243 (0%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
+Y LL+ + AK K E LF + + ++ N YN ++ + + EK ++
Sbjct: 115 RSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDW 174
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+ ++ PD+F+Y+ I+ A +D + DEMS + G + D Y L++ ++
Sbjct: 175 MWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMS-ERGVAPDVTCYNILIDGFLKEK 233
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
A E S T++ +I + G D +IW+ ++ +++ Y
Sbjct: 234 DHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTY 293
Query: 225 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 284
++ G++ + + ++ + S D+ N +LG F G +++ E ++
Sbjct: 294 SSLIHGLCDAGNVDKAESVFNELDERKAS-IDVVTYNTMLGGFCRCGKIKESLELWRIME 352
Query: 285 QKN 287
KN
Sbjct: 353 HKN 355
Score = 40.8 bits (94), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 85/211 (40%), Gaps = 2/211 (0%)
Query: 33 YFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSV 92
YFE + A +TY L+ + K EKA + + + + Y+ ++
Sbjct: 139 YFETAGV-APNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKA 197
Query: 93 GQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVK 152
G+++ + +E+ + V PD+ YN+ I + + D + DS + VK
Sbjct: 198 GKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPN-VK 256
Query: 153 YVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 212
N++ ++ V+ +++ ++ TY LI GN DK + ++ L
Sbjct: 257 THNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNEL 316
Query: 213 RMTKQKMTSRNYICILSSYLMLGHLKEVGEI 243
K + Y +L + G +KE E+
Sbjct: 317 DERKASIDVVTYNTMLGGFCRCGKIKESLEL 347
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY++L+H A +KAE +F + + S + + YN M+ + G++++ + +
Sbjct: 292 TYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIM 351
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQ 132
+ KN V +I +YN+ I ID+
Sbjct: 352 EHKNSV-NIVSYNILIKGLLENGKIDE 377
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 103/243 (42%), Gaps = 12/243 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYTAL+ +A AK E+A +L E +++ N + YN ++ + V VV+++
Sbjct: 181 TYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKM 240
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
P++ T+N + N+D +K L M G + V Y L++ +
Sbjct: 241 IEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVA-KGMRPNVVTYSALIDGLCKSQK 299
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN-- 223
+ A+ L E + TY LI GL DKI++ + LR + +
Sbjct: 300 FLEAK-EVLEEMKTRGVTPDAFTYSALI---HGLCKADKIEEAEQMLRRMAGSGCTPDVV 355
Query: 224 -YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 282
Y I+ ++ G L E + + + ++ S D+ N ++ +G K E ++
Sbjct: 356 VYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSP-DVVTYNTVIDGLCKLG---KIAEAQVI 411
Query: 283 LLQ 285
L Q
Sbjct: 412 LEQ 414
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/251 (18%), Positives = 107/251 (42%), Gaps = 4/251 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY+AL+H A E+AE++ R+ S + + ++Y+ ++ + G++ + ++E+
Sbjct: 321 TYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEM 380
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+++ PD+ TYN I I + + L++M D V Y ++N +
Sbjct: 381 RKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDM 440
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
LV A+ L K+ +TY +I G ++ + + + ++ Y
Sbjct: 441 LVEAQ-KLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYT 499
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF--HMLL 283
++S + E ++++ + + ++ N ++ G ++A + M
Sbjct: 500 TLISGLCKARKVDEAERVMEEMRNAGCPP-NLVTYNTMVNGLCVSGRIKEAQQLVQRMKD 558
Query: 284 LQKNCAPTNAS 294
+ C+P A+
Sbjct: 559 GRAECSPDAAT 569
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 68/141 (48%), Gaps = 3/141 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT ++ E+AE L + +K++ + N + Y +++ +V++ V+EE+
Sbjct: 462 TYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEM 521
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS-CDSGGSDDWVKYVNLVNIYITAS 164
+ P++ TYN ++ + I + ++ + M + S D Y +VN ++ S
Sbjct: 522 RNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMS-S 580
Query: 165 HLVNAESSTLVEAEKSITQRQ 185
LV E+ L+E KS T Q
Sbjct: 581 DLVQ-EAEQLLEQMKSTTSSQ 600
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 69/157 (43%), Gaps = 5/157 (3%)
Query: 37 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 96
+P + T+ ++ +LL + K +A +LF ++ + YN +++ + + G +
Sbjct: 70 IPGFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLH 129
Query: 97 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 156
++EE+K PD FT+ I++ A ++D L M CD + V Y L
Sbjct: 130 AALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCDP----NVVTYTAL 185
Query: 157 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLI 193
+ + A L A L E + +TY+ L+
Sbjct: 186 IAAFARAKKLEEA-MKLLEEMRERGCPPNLVTYNVLV 221
>gi|297830178|ref|XP_002882971.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328811|gb|EFH59230.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 642
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 117/278 (42%), Gaps = 6/278 (2%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLS--AKTSETYTALLHLYAGAKWTEKAEELFERVK 71
Y T + + KV + FE + + + T TYT L+ A E+A +L++ +
Sbjct: 271 YTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVEEAYDLYKNML 330
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC-AATLNI 130
L+ + + N +M + VG++E++ V E+ P + +YN I + + +
Sbjct: 331 TDGLTPDVVFLNNLMNILGKVGRLEELTNVFNEMGTWRCTPTVVSYNTVIKALFESKAPV 390
Query: 131 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 190
+V + D+M D G S Y L++ Y + + A L E ++ Y
Sbjct: 391 SEVSSWFDKMKAD-GVSPSEFTYSILIDGYCKTNRVEKA-LLLLEEMDEKGFPPCPAAYC 448
Query: 191 FLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQS 250
LI + ++++K L+ ++SR Y ++ + G L E ++ ++ K
Sbjct: 449 SLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQ 508
Query: 251 ATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 288
+ D+ A N L+ G+ +AN + + C
Sbjct: 509 GSGP-DVYAYNALMSGMVKAGMVNEANSLLRKMEENGC 545
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 1/114 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY+AL+ Y + A LF+ +K + + +Y ++ +Y VG+VEK + EE+
Sbjct: 235 TYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEM 294
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 159
KR P ++TY I +++ M D G + D V NL+NI
Sbjct: 295 KRAGCSPTVYTYTELIKGLGKAGRVEEAYDLYKNMLTD-GLTPDVVFLNNLMNI 347
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 94/208 (45%), Gaps = 11/208 (5%)
Query: 35 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 94
+G P Y +L++ AK E A ELF+ +K++ + ++ +Y M+ + G+
Sbjct: 438 KGFP---PCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGK 494
Query: 95 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 154
+ + + E+K + PD++ YN +S +++ L +M ++G + D +
Sbjct: 495 LSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMVNEANSLLRKME-ENGCTAD----I 549
Query: 155 NLVNIYIT--ASHLVNAESSTLVEAEKSI-TQRQWITYDFLIILYAGLGNKDKIDQIWKS 211
N NI + A V + + E K + +TY+ L+ +A G ++ ++ +
Sbjct: 550 NSHNIILNGFARTGVPRRAIEMFETMKHCGIKPDGVTYNTLLGCFAHAGMFEEAARLMRE 609
Query: 212 LRMTKQKMTSRNYICILSSYLMLGHLKE 239
++ + + Y IL + + H K+
Sbjct: 610 MKDKGFEYDAITYSSILDAVGNMDHEKD 637
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 66/163 (40%), Gaps = 6/163 (3%)
Query: 48 TALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI-K 106
+ L+ AK KA +F + K + YN ++ + M GQ EKV V E+
Sbjct: 166 SELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCN 225
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
+ PD TY+ ISS D + DEM + + + Y L+ IY +
Sbjct: 226 EGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKI-YTTLLGIYFKVGKV 284
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIW 209
A E +++ TY LI GLG ++++ +
Sbjct: 285 EKA-LDLFEEMKRAGCSPTVYTYTELI---KGLGKAGRVEEAY 323
>gi|356529889|ref|XP_003533519.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
chloroplastic-like [Glycine max]
Length = 526
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 127/282 (45%), Gaps = 14/282 (4%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLS--AKTSETYTALLHLYAGAKWTEKAEELFERVK 71
YA+ ++ + I G R +P S K + LL LYA + + A +LF+++
Sbjct: 93 YASLLETCYRFQAILHGIRVHRLIPTSLLHKNVGISSKLLRLYASCGYLDDAHDLFDQMA 152
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
+ + S A +N +++ Y VG ++ + ++ + V D+FT+ + CA ++
Sbjct: 153 KRDTS--AFPWNSLISGYAQVGHYDEAIALYFQMVEEGVEADLFTFPRVLKVCAGIGSV- 209
Query: 132 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 191
QV + + + +G + D LV++Y +V A + + R ++++
Sbjct: 210 QVGEEVHRHAIRAGFAADGFILNALVDMYSKCGDIVKAR-----KVFDKMPHRDPVSWNS 264
Query: 192 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 251
++ Y G + + I++ + + + S + +L+ LG +G I W S
Sbjct: 265 MLTAYVHHGLEVQAMNIFRQMLLEGCEPDSVSISTVLTGVSSLG----LGVQIHGWVISQ 320
Query: 252 TSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNA 293
++++S N L+ +S+ G EKA L+ +++ N+
Sbjct: 321 GHEWNLSIANSLIMMYSNHGRLEKARWVFNLMPERDVVSWNS 362
>gi|224093900|ref|XP_002310039.1| predicted protein [Populus trichocarpa]
gi|222852942|gb|EEE90489.1| predicted protein [Populus trichocarpa]
Length = 507
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 106/253 (41%), Gaps = 12/253 (4%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
+T+ LL +G K +E+AE +E +K+ + + + YN ++ ++ ++EK VV
Sbjct: 215 QTFNILL---SGWKSSEEAELFYEEMKELGVKPDIVTYNSLIDVFCKGRELEKAYGVVAR 271
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
++ ++++PD+ TY I D+ + L EM + G D Y ++ Y A
Sbjct: 272 MREEDILPDVITYTSIIGGLGLVGQPDKARDMLKEMK-EHGCYPDVAAYNAVIRNYCIAK 330
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL-RMTKQKMTSRN 223
L +A S + E E +Y+ +++ + + W RM
Sbjct: 331 RL-DAAYSLMAEMESKGMSPNATSYNLFFRVFSW---SNDLRNSWDFYGRMMDAGCLPNT 386
Query: 224 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFD--ISACNRLLGAFSDVGLTEKANEFHM 281
C+ L H K V + W F I + LLG D+G +A + +
Sbjct: 387 QSCMFLIKLFKRHEK-VEMALQLWNDMVEKGFGSYILVSDVLLGMLCDMGKLVEAEKCFL 445
Query: 282 LLLQKNCAPTNAS 294
+++K P+N S
Sbjct: 446 QMVEKGHKPSNVS 458
>gi|356527376|ref|XP_003532287.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like [Glycine max]
Length = 515
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 109/248 (43%), Gaps = 7/248 (2%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y L+ + K EKA ELF+ + + Y +++ Y G ++K ++EE+K
Sbjct: 160 YIKLIVMLGKCKQPEKAHELFQAMVDEGCVLDCESYTALLSAYSRSGLLDKAFSLLEEMK 219
Query: 107 R-KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
PD+ TY++ + SC D+++ L +M+ + G + V Y L++ Y A
Sbjct: 220 NTPGCQPDVQTYSILLKSCLQVFAFDKIQSLLSDMT-NRGIKPNTVTYNTLIDAYGKARK 278
Query: 166 LVNAESSTLVE--AEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 223
E S LVE A++ W T + + + +G + +++ ++ + + +
Sbjct: 279 FSEME-SILVEMLADRYCQPDVW-TMNSTLRAFGNIGQIETMEKCYEKFQNAGIQPNVQT 336
Query: 224 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 283
+ +L SY K++ ++ ++ Q + I N ++ AF G ++ L+
Sbjct: 337 FNILLDSYGKAQDYKKMSAVM-EYMQKYHYSWTIVTFNIVIDAFGKAGDLKQMEYLFRLM 395
Query: 284 LQKNCAPT 291
+ P+
Sbjct: 396 RSERIKPS 403
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 50/247 (20%), Positives = 106/247 (42%), Gaps = 6/247 (2%)
Query: 46 TYTALLHLYAGA-KWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
TY L+ Y A K++E L E + + N + + ++GQ+E + E+
Sbjct: 265 TYNTLIDAYGKARKFSEMESILVEMLADRYCQPDVWTMNSTLRAFGNIGQIETMEKCYEK 324
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+ + P++ T+N+ + S + ++ ++ M S V + +++ + A
Sbjct: 325 FQNAGIQPNVQTFNILLDSYGKAQDYKKMSAVMEYMQ-KYHYSWTIVTFNIVIDAFGKAG 383
Query: 165 HLVNAES-STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 223
L E L+ +E+ + +T L+ YA G +KI + + + + + +
Sbjct: 384 DLKQMEYLFRLMRSER--IKPSCVTLCSLVRAYARAGKPEKISGVLRFVENSDVLLDTVF 441
Query: 224 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 283
+ C++ +Y LG L E+ +++ KQ+ DI ++ ++ G+ A E LL
Sbjct: 442 FNCLVDAYARLGCLAEMKGVLEMMKQNGCKP-DIVTYRTMIKTYTYKGMDSHAKELRELL 500
Query: 284 LQKNCAP 290
N P
Sbjct: 501 PTVNRPP 507
>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
Length = 545
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 110/257 (42%), Gaps = 18/257 (7%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY AL+ + ++A +LFE + + YN M+ G++E + +++
Sbjct: 242 TYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDM 301
Query: 106 KRK-NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
R+ ++ PD+FTY+ I+ + ++ + +EM D+G S D V Y L++ +
Sbjct: 302 VREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEM-LDTGCSPDVVTYNTLLDGLCKSG 360
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN- 223
A ++ ITY LI + K+D++ ++++ K+ M R+
Sbjct: 361 CEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFC------KVDRLGDAVKLAKE-MEGRSL 413
Query: 224 ------YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 277
+ ++ + E E+ + ++ D + N +L + + + A
Sbjct: 414 LPDAVTFTTVIQKLCKESRIDEAHELFESIGKTCKPDSVLF--NTMLAGYCKITRIDDAK 471
Query: 278 EFHMLLLQKNCAPTNAS 294
+ H +L CAPT A+
Sbjct: 472 KLHDRMLDSGCAPTLAT 488
>gi|224069810|ref|XP_002303045.1| predicted protein [Populus trichocarpa]
gi|222844771|gb|EEE82318.1| predicted protein [Populus trichocarpa]
Length = 388
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 109/248 (43%), Gaps = 7/248 (2%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y L+ + K +KA +LF+ + + Y +++ Y G +K ++EE+K
Sbjct: 33 YVKLIVMLGKCKQPDKAHQLFQAMIDEGCAVTHESYTALLSAYGRSGLFDKAFSIMEEMK 92
Query: 107 R-KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ PD+ TY++ I SC D+V+ L +M G + V Y +++ Y A
Sbjct: 93 NTPDCRPDVHTYSILIKSCLQVFAFDKVQVLLSDME-SLGIRPNTVTYNTVIDAYGKAKM 151
Query: 166 LVNAESSTLVE--AEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 223
E +TL+E +++ W T + I + G G + ++ ++ + + +
Sbjct: 152 FAEME-ATLMEMLSQQDCEPDVW-TMNSTIRAFGGSGQMEMMENCYEKFQSAGIEPNIKT 209
Query: 224 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 283
+ +L SY G+ +++ ++ ++ Q + I N ++ AF G ++ L+
Sbjct: 210 FNILLDSYGKAGNYQKMSAVM-EYMQRYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLM 268
Query: 284 LQKNCAPT 291
+ P+
Sbjct: 269 RSERIKPS 276
Score = 40.4 bits (93), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 48/240 (20%), Positives = 101/240 (42%), Gaps = 6/240 (2%)
Query: 46 TYTALLHLYAGAK-WTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
TY ++ Y AK + E L E + Q + + N + + GQ+E + E+
Sbjct: 138 TYNTVIDAYGKAKMFAEMEATLMEMLSQQDCEPDVWTMNSTIRAFGGSGQMEMMENCYEK 197
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+ + P+I T+N+ + S N ++ ++ M S V Y +++ + A
Sbjct: 198 FQSAGIEPNIKTFNILLDSYGKAGNYQKMSAVMEYMQ-RYHYSWTIVTYNVVIDAFGRAG 256
Query: 165 HLVNAES-STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 223
L E L+ +E+ + +T L+ Y G +KI + + + + + +
Sbjct: 257 DLKQMEYLFRLMRSER--IKPSCVTLCSLVRAYREAGKPEKIGSVLRFIENSDVTLDTVF 314
Query: 224 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 283
+ C++ +Y L E+ E+++ ++ D ++ A+S G+T A + LL
Sbjct: 315 FNCLVDAYGRLECFAEMKEVLELMEEKGCKP-DKVTYRTMIKAYSIKGMTSHAKKLRNLL 373
>gi|218197756|gb|EEC80183.1| hypothetical protein OsI_22045 [Oryza sativa Indica Group]
Length = 577
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 79/186 (42%), Gaps = 2/186 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY A++ ++ ++AE +F+ + + +A+ YN ++ + G VE+V V EE+
Sbjct: 103 TYNAMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEEL 162
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ D TYN I +D DEM G + D V Y LV+
Sbjct: 163 VKAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRA-IGCTPDAVTYTVLVDSLGKMDR 221
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ A L E + + +T+ LI YA G +D ++ + + + K Y+
Sbjct: 222 ISEA-GKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYL 280
Query: 226 CILSSY 231
+L +
Sbjct: 281 VMLDVF 286
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 80/184 (43%), Gaps = 2/184 (1%)
Query: 63 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 122
A EL V+Q+ L +A+ YN +++ ++ V EE+ PD++TYN +S
Sbjct: 50 ALELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVS 109
Query: 123 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT 182
+ + E+ + G D V Y +L+ + + E E K+
Sbjct: 110 VHGRCGKAQEAELMFKEL-VEKGFQPDAVTYNSLLYAFAKEGDVERVE-RVCEELVKAGF 167
Query: 183 QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 242
++ ITY+ +I +Y +G D ++ +R + Y ++ S + + E G+
Sbjct: 168 RKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGK 227
Query: 243 IIDQ 246
++++
Sbjct: 228 VLEE 231
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 78/168 (46%), Gaps = 7/168 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L+ + + A +FE + S + YN M++++ G+ ++ L+ +E+
Sbjct: 68 TYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAELMFKEL 127
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K PD TYN + + A ++++V++ +E+ +G D + Y ++++Y
Sbjct: 128 VEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEEL-VKAGFRKDGITYNTMIHMYGKMGR 186
Query: 166 LVNAESSTLVEAEKSI-TQRQWITYDFLIILYAGLGNKDKIDQIWKSL 212
L A L + ++I +TY +L LG D+I + K L
Sbjct: 187 LDLALG--LYDEMRAIGCTPDAVTY---TVLVDSLGKMDRISEAGKVL 229
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/164 (18%), Positives = 78/164 (47%), Gaps = 7/164 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY ++H+Y + A L++ ++ + +A+ Y ++ + ++ + V+EE+
Sbjct: 173 TYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEM 232
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ P + T++ I + A + D ++ D M +SG D + Y+ +++++ +
Sbjct: 233 ADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRM-VESGVKPDRLAYLVMLDVFARSD- 290
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLI-ILYAGLGNKDKIDQI 208
E+ L+ +++ + + D L +L A L ++ D+I
Sbjct: 291 ----ETRKLMVLYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEI 330
Score = 37.4 bits (85), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 26/125 (20%), Positives = 58/125 (46%), Gaps = 11/125 (8%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T++AL+ YA + + AE F+R+ +S + + L Y M+ ++ + K+ ++ +
Sbjct: 243 TFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMVLYRAM 302
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ PD Y + +++ A D+++ + +M V +N + +S
Sbjct: 303 IKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDMEA-----------VFEMNPLVISSI 351
Query: 166 LVNAE 170
L+ AE
Sbjct: 352 LIKAE 356
>gi|28393724|gb|AAO42273.1| unknown protein [Arabidopsis thaliana]
Length = 642
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 1/114 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY+AL+ Y + A LF+ +K + + +Y ++ +Y VG+VEK + EE+
Sbjct: 235 TYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEM 294
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 159
KR P ++TY I +D+ F +M D G + D V NL+NI
Sbjct: 295 KRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRD-GLTPDVVFLNNLMNI 347
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 109/282 (38%), Gaps = 39/282 (13%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY-------------------- 82
T + YT LL +Y EKA +LFE +K++ S Y
Sbjct: 267 TEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFY 326
Query: 83 ---------------NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC-AA 126
N +M + VG+VE++ V E+ P + +YN I + +
Sbjct: 327 KDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFES 386
Query: 127 TLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQW 186
++ +V + D+M DS ++ Y L++ Y + + A L E ++
Sbjct: 387 KAHVSEVSSWFDKMKADSVSPSEFT-YSILIDGYCKTNRVEKA-LLLLEEMDEKGFPPCP 444
Query: 187 ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 246
Y LI + D+++K L+ ++SR Y ++ + G L E ++ ++
Sbjct: 445 AAYCSLINALGKAKRYEAADELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNE 504
Query: 247 WKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 288
K + D+ A N L+ G+ +AN + + C
Sbjct: 505 MKNQGSGP-DVYAYNALMSGMVKAGMINEANSLLRKMEENGC 545
Score = 44.3 bits (103), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 94/208 (45%), Gaps = 11/208 (5%)
Query: 35 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 94
+G P Y +L++ AK E A+ELF+ +K++ + ++ +Y M+ + G+
Sbjct: 438 KGFP---PCPAAYCSLINALGKAKRYEAADELFKELKENFGNVSSRVYAVMIKHFGKCGK 494
Query: 95 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 154
+ + + E+K + PD++ YN +S I++ L +M + +D +
Sbjct: 495 LSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRAD-----I 549
Query: 155 NLVNIYIT--ASHLVNAESSTLVEAEK-SITQRQWITYDFLIILYAGLGNKDKIDQIWKS 211
N NI + A V + + E K S + +TY+ L+ +A G ++ ++ +
Sbjct: 550 NSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMRE 609
Query: 212 LRMTKQKMTSRNYICILSSYLMLGHLKE 239
++ + + Y IL + + H K+
Sbjct: 610 MKDKGFEYDAITYSSILDAVGNVDHEKD 637
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 66/163 (40%), Gaps = 6/163 (3%)
Query: 48 TALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI-K 106
+ L+ AK KA +F + K + YN ++ + M GQ EKV V E+
Sbjct: 166 SELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCN 225
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
+ PD TY+ ISS D + DEM + + + Y L+ IY +
Sbjct: 226 EGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKI-YTTLLGIYFKVGKV 284
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIW 209
A E +++ TY LI GLG ++D+ +
Sbjct: 285 EKA-LDLFEEMKRAGCSPTVYTYTELI---KGLGKAGRVDEAY 323
>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 115/284 (40%), Gaps = 13/284 (4%)
Query: 14 YATRIDLMTKVFGIHSGERYF-----EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFE 68
Y T ID + K + +F EG+P T Y+++LH + +A LF+
Sbjct: 83 YNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFT---YSSILHGFCNLGRVNEATSLFK 139
Query: 69 RVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATL 128
++ + N+ N + + ++ + + LV E + K + PD++TYN + +
Sbjct: 140 QMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRS 199
Query: 129 NIDQVKKFLDEMSCDSGGSDDWVKYVN-LVNIYITASHLVNAESSTLVEAEKSITQRQWI 187
+D+ +K + M D G V+ N L+N + + + A+ + KS+T
Sbjct: 200 QMDEAQKLFNIM--DRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTP-DIF 256
Query: 188 TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQW 247
TY L+ + +G + ++ K + Y +L GHL E E++
Sbjct: 257 TYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAM 316
Query: 248 KQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 291
++S +I L+ G E A E L K PT
Sbjct: 317 QESKIEP-NIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPT 359
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 105/234 (44%), Gaps = 9/234 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY AL+ Y ++A++LF + + + N YN ++ + G++++ ++ E+
Sbjct: 187 TYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEM 246
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K++ PDIFTY+ + + ++ L EM C G + + Y +++ H
Sbjct: 247 SHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEM-CSYGLLPNLITYSIVLDGLCKHGH 305
Query: 166 LVNAESSTLVEA-EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
L E+ L++A ++S + Y LI G + +++ +L + + T Y
Sbjct: 306 L--DEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTY 363
Query: 225 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC--NRLLGAFSDVGLTEKA 276
++S L G E E+ +++ A + ++C N ++ F G T A
Sbjct: 364 TVMISGLLKGGLSNEACEL---FREMAVNGCLPNSCTYNVIIQGFLRNGDTPNA 414
>gi|15233259|ref|NP_188222.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274469|sp|Q9LW84.1|PP236_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g16010
gi|9294448|dbj|BAB02667.1| unnamed protein product [Arabidopsis thaliana]
gi|332642241|gb|AEE75762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 642
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 1/114 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY+AL+ Y + A LF+ +K + + +Y ++ +Y VG+VEK + EE+
Sbjct: 235 TYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEM 294
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 159
KR P ++TY I +D+ F +M D G + D V NL+NI
Sbjct: 295 KRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRD-GLTPDVVFLNNLMNI 347
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/282 (20%), Positives = 109/282 (38%), Gaps = 39/282 (13%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY-------------------- 82
T + YT LL +Y EKA +LFE +K++ S Y
Sbjct: 267 TEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFY 326
Query: 83 ---------------NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC-AA 126
N +M + VG+VE++ V E+ P + +YN I + +
Sbjct: 327 KDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFES 386
Query: 127 TLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQW 186
++ +V + D+M DS ++ Y L++ Y + + A L E ++
Sbjct: 387 KAHVSEVSSWFDKMKADSVSPSEFT-YSILIDGYCKTNRVEKA-LLLLEEMDEKGFPPCP 444
Query: 187 ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 246
Y LI + ++++K L+ ++SR Y ++ + G L E ++ ++
Sbjct: 445 AAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNE 504
Query: 247 WKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 288
K + D+ A N L+ G+ +AN + + C
Sbjct: 505 MKNQGSGP-DVYAYNALMSGMVKAGMINEANSLLRKMEENGC 545
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 93/208 (44%), Gaps = 11/208 (5%)
Query: 35 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 94
+G P Y +L++ AK E A ELF+ +K++ + ++ +Y M+ + G+
Sbjct: 438 KGFP---PCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGK 494
Query: 95 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 154
+ + + E+K + PD++ YN +S I++ L +M + +D +
Sbjct: 495 LSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRAD-----I 549
Query: 155 NLVNIYIT--ASHLVNAESSTLVEAEK-SITQRQWITYDFLIILYAGLGNKDKIDQIWKS 211
N NI + A V + + E K S + +TY+ L+ +A G ++ ++ +
Sbjct: 550 NSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMRE 609
Query: 212 LRMTKQKMTSRNYICILSSYLMLGHLKE 239
++ + + Y IL + + H K+
Sbjct: 610 MKDKGFEYDAITYSSILDAVGNVDHEKD 637
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 66/163 (40%), Gaps = 6/163 (3%)
Query: 48 TALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI-K 106
+ L+ AK KA +F + K + YN ++ + M GQ EKV V E+
Sbjct: 166 SELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCN 225
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
+ PD TY+ ISS D + DEM + + + Y L+ IY +
Sbjct: 226 EGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKI-YTTLLGIYFKVGKV 284
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIW 209
A E +++ TY LI GLG ++D+ +
Sbjct: 285 EKA-LDLFEEMKRAGCSPTVYTYTELI---KGLGKAGRVDEAY 323
>gi|115483719|ref|NP_001065521.1| Os11g0103000 [Oryza sativa Japonica Group]
gi|77548314|gb|ABA91111.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|113644225|dbj|BAF27366.1| Os11g0103000 [Oryza sativa Japonica Group]
Length = 543
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 98/222 (44%), Gaps = 6/222 (2%)
Query: 78 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVV-----PDIFTYNLWISSCAATLNIDQ 132
N+ +Y +M YM+ G+VE V ++ ++R+ PD TY IS+ A ++++
Sbjct: 196 NSRVYTTLMKGYMNAGRVEDVVAMLRAMRREGETSPASRPDHVTYTTVISTLVAAGDMER 255
Query: 133 VKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFL 192
+ L+EM +G + V Y L+ Y A+ V+ ++ Q +TY+ L
Sbjct: 256 ARAVLEEMG-QAGVAASRVTYNVLIKGYCQQLQAGKAKELLAVDMAEAGIQPDVVTYNTL 314
Query: 193 IILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSAT 252
I + ++ +R ++ +Y ++ ++ G K ++ D+ ++
Sbjct: 315 IDGCVLTDDSAGAVALFNEMRERGIAPSAVSYTTLMKAFAASGQPKLAHKVFDEMEKDPR 374
Query: 253 SDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
D +A N L+ A+ +GL E A + + + P A+
Sbjct: 375 VAVDRAAWNMLVEAYCRLGLLESAKKVVERMKARGVQPDVAT 416
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 104/276 (37%), Gaps = 21/276 (7%)
Query: 27 IHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMM 86
+ + R E P S TYT ++ A E+A + E + Q+ ++ + + YN ++
Sbjct: 220 LRAMRREGETSPASRPDHVTYTTVISTLVAAGDMERARAVLEEMGQAGVAASRVTYNVLI 279
Query: 87 TLYMSVGQVEKVA-LVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSG 145
Y Q K L+ ++ + PD+ TYN I C T + +EM + G
Sbjct: 280 KGYCQQLQAGKAKELLAVDMAEAGIQPDVVTYNTLIDGCVLTDDSAGAVALFNEMR-ERG 338
Query: 146 GSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK----SITQRQWITYDFLIILYAGLGN 201
+ V Y L+ + AS E EK ++ + W + L+ Y LG
Sbjct: 339 IAPSAVSYTTLMKAF-AASGQPKLAHKVFDEMEKDPRVAVDRAAW---NMLVEAYCRLG- 393
Query: 202 KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGH----LKEVGEIIDQWKQSATSDFDI 257
+ +S + ++M +R +++Y L + GE + W++ + D
Sbjct: 394 ------LLESAKKVVERMKARGVQPDVATYGSLAKGIAVARRPGEALLLWEEIKEKEVDG 447
Query: 258 SACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNA 293
L L KA E + + P A
Sbjct: 448 EVVEALADVCVRAALFRKALEMVARMEEMGVEPNKA 483
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 43/222 (19%), Positives = 90/222 (40%), Gaps = 11/222 (4%)
Query: 37 LPLSAKT----SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNA-----LMYNEMMT 87
+PL K S YT L+ Y A E + +++ + A + Y +++
Sbjct: 186 VPLLPKAYPPNSRVYTTLMKGYMNAGRVEDVVAMLRAMRREGETSPASRPDHVTYTTVIS 245
Query: 88 LYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGS 147
++ G +E+ V+EE+ + V TYN+ I L + K+ L ++G
Sbjct: 246 TLVAAGDMERARAVLEEMGQAGVAASRVTYNVLIKGYCQQLQAGKAKELLAVDMAEAGIQ 305
Query: 148 DDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQ 207
D V Y L++ + A + E+ I ++Y L+ +A G +
Sbjct: 306 PDVVTYNTLIDGCVLTDDSAGAVALFNEMRERGIAP-SAVSYTTLMKAFAASGQPKLAHK 364
Query: 208 IWKSLRMTKQKMTSR-NYICILSSYLMLGHLKEVGEIIDQWK 248
++ + + R + ++ +Y LG L+ +++++ K
Sbjct: 365 VFDEMEKDPRVAVDRAAWNMLVEAYCRLGLLESAKKVVERMK 406
>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
Length = 569
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 89/208 (42%), Gaps = 10/208 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+T+L+ G E A EL E + + YN ++ Y QV K +V +
Sbjct: 359 TFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADF 418
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ + VP+ TYN+ ++ C DQ ++LD+++ + G V + I +
Sbjct: 419 RSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAI----ILDAL 474
Query: 166 LVNAESSTLVEAEKSITQRQWIT--YDFLIILYAGLGNKDKIDQIWKSL-RMTKQKMTSR 222
+ + V+ + + QR ++ F +++A L + Q + L M K T
Sbjct: 475 CRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFA-LCKAHQPQQAHELLEEMIKYGHTPG 533
Query: 223 NYIC--ILSSYLMLGHLKEVGEIIDQWK 248
C ++S+Y G +++ E+ + +
Sbjct: 534 PGTCDAVVSAYCRAGMIQKADELASELR 561
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 87/233 (37%), Gaps = 44/233 (18%)
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV-EKVALVVEEIKRKNVVPDIFTYNL 119
+ A EL E + ++ NA+ Y+ ++ ++ E VAL++ E+ R+ PDI TY+
Sbjct: 201 DDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYST 260
Query: 120 WISS-CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAE 178
I C A D V F +EMSC
Sbjct: 261 VIDGLCKAGRLRDAVDIF-EEMSCAP---------------------------------- 285
Query: 179 KSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLK 238
ITY+ LI Y G+ D+ ++ + Y ++S++ +G L
Sbjct: 286 ------TAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLD 339
Query: 239 EVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 291
+ E+ Q + S D+ L+ G E A E + ++ C PT
Sbjct: 340 DAYELFQQMVANKLSP-DVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPT 391
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 89/211 (42%), Gaps = 6/211 (2%)
Query: 2 VTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTE 61
VT + F Y+T ID + K + FE + A T+ TY +L+ Y A +
Sbjct: 246 VTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS-CAPTAITYNSLIGGYCRAGDMD 304
Query: 62 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 121
+A L ++ N + + + Y +M+ + +G+++ + +++ + PD+ T+ +
Sbjct: 305 EAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLV 364
Query: 122 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI 181
++ + L+E++ G Y +V+ Y ++ + AE +
Sbjct: 365 DGLCGEGRMEDALELLEEIT-RRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGF 423
Query: 182 TQRQWITYDFLIILYAGLGNKDKIDQIWKSL 212
+TY+ IL AG + DQ + L
Sbjct: 424 VP-NTVTYN---ILVAGCCRAGRTDQALQYL 450
Score = 44.3 bits (103), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 26/131 (19%), Positives = 59/131 (45%), Gaps = 18/131 (13%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT L+ + + A ELF+++ + LS + + + ++ G++E ++EEI
Sbjct: 324 TYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEI 383
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM------------------SCDSGGS 147
R+ P I+TYN + + + + ++ + + C +G +
Sbjct: 384 TRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRT 443
Query: 148 DDWVKYVNLVN 158
D ++Y++ +N
Sbjct: 444 DQALQYLDQLN 454
>gi|162460162|ref|NP_001106062.1| pentatricopeptide repeat 5 [Zea mays]
gi|154520281|gb|ABS82814.1| pentatricopeptide repeat protein 5 [Zea mays]
gi|413924537|gb|AFW64469.1| pentatricopeptide repeat 5 [Zea mays]
Length = 499
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 100/217 (46%), Gaps = 7/217 (3%)
Query: 33 YFEGLPLSAKTSET---YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLY 89
YFE + + T Y LL +A A T++ + LF+ + +S +S + YN ++ Y
Sbjct: 185 YFEKMKCIERCQPTIVTYNILLRAFAQAGDTKQVDMLFKDLDESVVSPDVYTYNGVLDAY 244
Query: 90 MSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDD 149
G ++++ V+ +K PD+ T+N+ I S D++++ + S
Sbjct: 245 GKNGMIKEMESVLVRMKSTQCRPDVITFNILIDSYGRKQTFDKMEQVFKSL-LRSKERPT 303
Query: 150 WVKYVNLVNIYITASHLVNAESSTLVEAEKSIT-QRQWITYDFLIILYAGLGNKDKIDQI 208
+ +++ Y A AES +VE + + + ++T + LII+YA K Q+
Sbjct: 304 HPTFNSMITNYGRARLREKAES--VVEKMEELGFKPNYVTQECLIIMYAHCDCVSKARQV 361
Query: 209 WKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIID 245
+ L ++ K+ + +L +Y M G E ++D
Sbjct: 362 FDELVTSQTKVHLSSLNSMLEAYCMNGLHTEADRLLD 398
>gi|223946379|gb|ACN27273.1| unknown [Zea mays]
gi|413924536|gb|AFW64468.1| pentatricopeptide repeat 5 [Zea mays]
Length = 386
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 100/217 (46%), Gaps = 7/217 (3%)
Query: 33 YFEGLPLSAKTSET---YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLY 89
YFE + + T Y LL +A A T++ + LF+ + +S +S + YN ++ Y
Sbjct: 72 YFEKMKCIERCQPTIVTYNILLRAFAQAGDTKQVDMLFKDLDESVVSPDVYTYNGVLDAY 131
Query: 90 MSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDD 149
G ++++ V+ +K PD+ T+N+ I S D++++ + S
Sbjct: 132 GKNGMIKEMESVLVRMKSTQCRPDVITFNILIDSYGRKQTFDKMEQVFKSL-LRSKERPT 190
Query: 150 WVKYVNLVNIYITASHLVNAESSTLVEAEKSIT-QRQWITYDFLIILYAGLGNKDKIDQI 208
+ +++ Y A AES +VE + + + ++T + LII+YA K Q+
Sbjct: 191 HPTFNSMITNYGRARLREKAES--VVEKMEELGFKPNYVTQECLIIMYAHCDCVSKARQV 248
Query: 209 WKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIID 245
+ L ++ K+ + +L +Y M G E ++D
Sbjct: 249 FDELVTSQTKVHLSSLNSMLEAYCMNGLHTEADRLLD 285
>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 966
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 78/172 (45%), Gaps = 4/172 (2%)
Query: 55 AGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDI 114
G EKA ++ + + + +A Y +++T +V+K L+ +E+K+ V PD+
Sbjct: 428 CGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDV 487
Query: 115 FTYNLWISS-CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESST 173
+TY + I S C A L I+Q + + DEM +G S + V Y L++ Y+ + L A +
Sbjct: 488 YTYTILIDSFCKAGL-IEQAQSWFDEMR-SAGCSPNVVTYTALLHAYLKSKQLYQA-NDI 544
Query: 174 LVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
ITY LI G K +++ L T + S Y
Sbjct: 545 FHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYF 596
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 115/285 (40%), Gaps = 36/285 (12%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSE---TYTALLHLYAGAKWTEKAEELFERV 70
Y ID K I + +F+ + SA S TYTALLH Y +K +A ++F R+
Sbjct: 490 YTILIDSFCKAGLIEQAQSWFDEM-RSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRM 548
Query: 71 KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI--KRKNVVPDIFTYNLWISSCAATL 128
NA+ Y+ ++ G+++K V ++ N+ D +
Sbjct: 549 VGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEG---------K 599
Query: 129 NIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI-TQRQWI 187
+ D + S + V Y LVN A + +A L++A + + I
Sbjct: 600 DTDTI-------------SPNVVTYGALVNGLCKAQKVSDAHD--LLDAMLAAGCEPNQI 644
Query: 188 TYDFLIILYAGLGNKDKIDQIWKSLRMTKQK--MTSRNYICILSSYLMLGHLKEVGEIID 245
YD L+ + +G D +++ LRMTK + Y ++ G L +++
Sbjct: 645 VYDALVDGFCKVGEIDSAQEVF--LRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLS 702
Query: 246 QWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
Q + + + ++ ++ G TEKA L+ +K C+P
Sbjct: 703 QMLKDSCNP-NVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSP 746
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 1/109 (0%)
Query: 63 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 122
AE+++E + ++ N + VG+ EK +V+E+ RK VPD TY I+
Sbjct: 401 AEKVYEEMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVIT 460
Query: 123 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES 171
+D+ EM G + D Y L++ + A + A+S
Sbjct: 461 FLCQAKRVDKAFLLFQEMK-KVGVNPDVYTYTILIDSFCKAGLIEQAQS 508
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 38/82 (46%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYTA++ TEKA L +++ S N + Y ++ G+V+ + ++
Sbjct: 715 TYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQM 774
Query: 106 KRKNVVPDIFTYNLWISSCAAT 127
K K P+ TY + I+ C A
Sbjct: 775 KTKGCAPNYVTYRILINHCCAA 796
>gi|225423724|ref|XP_002276864.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Vitis vinifera]
Length = 587
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 113/260 (43%), Gaps = 9/260 (3%)
Query: 36 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 95
G P SA Y A + T+KA E+FER+K+ + Y ++ LY +
Sbjct: 233 GFPPSAVV---YNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKS 289
Query: 96 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 155
V E++ + P+I T+ +++ A ++ ++ +++ ++G D Y
Sbjct: 290 YMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQ-EAGLEPDVYAYNA 348
Query: 156 LVNIYITASHLVNA-ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM 214
L+ Y A A E +L++ R +Y+ ++ Y G + +++ ++
Sbjct: 349 LMEAYSRAGFPYGAAEIFSLMQHMGCEPDRA--SYNIMVDAYGRAGLHEDAQAVFEVMKR 406
Query: 215 TKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTE 274
T ++++ +LS+Y G + + EI++Q +S D N +L + +G E
Sbjct: 407 LGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKP-DTFVLNSMLNLYGRLGQFE 465
Query: 275 KANEFHMLLLQKNCAPTNAS 294
K E + ++K P + S
Sbjct: 466 KMEEV-LTAMEKGPYPADIS 484
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 89/202 (44%), Gaps = 37/202 (18%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNL-----SFNALM------------------- 81
T+TAL++ +A EKAEE+FE+++++ L ++NALM
Sbjct: 310 TFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLM 369
Query: 82 -----------YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 130
YN M+ Y G E V E +KR + P + ++ L +S+ + +
Sbjct: 370 QHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKV 429
Query: 131 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 190
+ ++ +++M SG D +++N+Y E L EK TY+
Sbjct: 430 AKCEEIVNQMH-KSGIKPDTFVLNSMLNLYGRLGQFEKME-EVLTAMEKGPYPADISTYN 487
Query: 191 FLIILYAGLGNKDKIDQIWKSL 212
LI +Y G +++++++SL
Sbjct: 488 ILINIYGRAGFFARMEELFRSL 509
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 49/248 (19%), Positives = 85/248 (34%), Gaps = 38/248 (15%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y L+ Y +KAE + + ++ Y ++ Y + G +EK V E++
Sbjct: 171 YNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAVFAEMR 230
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
+ P YN +I + + + + M D
Sbjct: 231 KYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDR---------------------- 268
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 226
Q TY LI LY +++ +R K K +
Sbjct: 269 ---------------CQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTA 313
Query: 227 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 286
+++++ G ++ EI +Q Q A + D+ A N L+ A+S G A E L+
Sbjct: 314 LVNAFAREGLCEKAEEIFEQL-QEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHM 372
Query: 287 NCAPTNAS 294
C P AS
Sbjct: 373 GCEPDRAS 380
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 44/80 (55%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 102
T +++ LL Y+ A K EE+ ++ +S + + + N M+ LY +GQ EK+ V+
Sbjct: 412 TMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVL 471
Query: 103 EEIKRKNVVPDIFTYNLWIS 122
+++ DI TYN+ I+
Sbjct: 472 TAMEKGPYPADISTYNILIN 491
>gi|356533316|ref|XP_003535211.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Glycine max]
Length = 918
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 93/212 (43%), Gaps = 14/212 (6%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY ++++ + ++AE L ++ + +Y+ MM Y +G EK +V + +
Sbjct: 381 TYGSIIYAHCQTCNMDRAEALVREMEVQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRL 440
Query: 106 KRKNVVPDIFTY----NLW--ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 159
K P + +Y NL+ I + L I ++ K SG + Y L+N
Sbjct: 441 KECGFSPSVISYGCLINLYTKIGKVSKALQISKMMKM-------SGIKHNMKTYSMLING 493
Query: 160 YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 219
++ NA S + K + + Y+ +I + G+ N D+ + K ++ + +
Sbjct: 494 FLKLKDWANA-FSVFEDFTKDGLKPDVVLYNNIITAFCGMSNMDRAICMVKQMQKERYRP 552
Query: 220 TSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 251
T+R ++ I+ + G ++ EI D ++S
Sbjct: 553 TTRTFLPIIHGFARAGEMRRALEIFDMMRRSG 584
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 80/187 (42%), Gaps = 2/187 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT L+ YA TEKA + F ++ L + Y ++ G+++ V +E+
Sbjct: 626 TYTTLMQGYASLGDTEKAFQYFSVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEM 685
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
KN+ + F YN+ I A ++ + + +M G D Y + VN A
Sbjct: 686 SAKNIPRNTFVYNILIDGWARRGDVWEAADLMQQMR-KEGVLPDIHTYTSFVNACCKAGD 744
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ A + + E E + TY LI +A +K ++ +++ + K Y
Sbjct: 745 MQKA-TEIIQEMEAFGIKPNLKTYTTLINGWARASMPEKALSCFEEMKLAELKPDKAAYH 803
Query: 226 CILSSYL 232
C+++S L
Sbjct: 804 CLMTSLL 810
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/277 (20%), Positives = 116/277 (41%), Gaps = 18/277 (6%)
Query: 5 KEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEK 62
KE+ L YA R D+ H + FE + +S Y++L+H YA + E+
Sbjct: 275 KEYGLMVKYYARRGDM-------HHARQTFESMQARGIEPSSHVYSSLIHAYAVGRDMEE 327
Query: 63 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 122
A ++K+ + + Y+ ++ + +G+ + +E K K + TY I
Sbjct: 328 ALHCVRKMKEEGIEMTIVTYSIIVGGFAKMGKADAADHWFKEAKEKLPSLNAVTYGSIIY 387
Query: 123 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLV---EAEK 179
+ T N+D+ + + EM G D +++ + + ++ E L+ ++
Sbjct: 388 AHCQTCNMDRAEALVREMEVQ--GID---APIDIYHTMMDGYTMIGNEEKCLIVFDRLKE 442
Query: 180 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 239
I+Y LI LY +G K QI K ++M+ K + Y +++ +L L
Sbjct: 443 CGFSPSVISYGCLINLYTKIGKVSKALQISKMMKMSGIKHNMKTYSMLINGFLKLKDWAN 502
Query: 240 VGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
+ + + + D+ N ++ AF + ++A
Sbjct: 503 AFSVFEDFTKDGLKP-DVVLYNNIITAFCGMSNMDRA 538
>gi|225457536|ref|XP_002272226.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial [Vitis vinifera]
gi|297745544|emb|CBI40709.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 111/246 (45%), Gaps = 20/246 (8%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY+ L+ YA A E A + + ++ S + N+ +++ ++ Y G+ +K V+ E+
Sbjct: 363 TYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREM 422
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ V PD YN+ I + +D D M + G D V + L++ + + H
Sbjct: 423 RNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRME-GVQPDAVTWNTLIDCHCKSGH 481
Query: 166 LVNAESSTLVEA-EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
AE L EA ++S TY+ +I G +++ W+ ++ KM S+
Sbjct: 482 HNKAEE--LFEAMQESGCSPCTTTYNIMI---NSFGEQER----WEDVKTLLGKMQSQGL 532
Query: 225 ICILSSYLML-------GHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA- 276
+ + +Y L G K+ E ++ K S + N L+ A++ GL+E+A
Sbjct: 533 LANVVTYTTLVDIYGQSGRFKDAIECLEVMK-SVGLKPSSTMYNALINAYAQRGLSEQAI 591
Query: 277 NEFHML 282
N F ++
Sbjct: 592 NAFRVM 597
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 1/117 (0%)
Query: 35 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 94
+G LS KT+ T A++ A TE+AE +FE +K+ L YN ++ Y+ G
Sbjct: 283 QGNGLSPKTA-TLVAVITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGS 341
Query: 95 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWV 151
++ +V E++R PD TY+L I + A + + L EM + +V
Sbjct: 342 LKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYV 398
Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 47/237 (19%), Positives = 87/237 (36%), Gaps = 3/237 (1%)
Query: 54 YAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPD 113
+A + +A V+ + LS ++T + G+ E+ + EE+K ++P
Sbjct: 266 FAKSGDVNRAMSFLAMVQGNGLSPKTATLVAVITALGNAGRTEEAEAIFEELKEGGLMPR 325
Query: 114 IFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESST 173
YN + T ++ + + EM SG S D Y L++ Y A +A
Sbjct: 326 TRAYNALLKGYVKTGSLKDAESIVSEME-RSGFSPDEHTYSLLIDAYANAGRWESAR-IV 383
Query: 174 LVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLM 233
L E E S + + ++ Y G K Q+ + +R + Y ++ ++
Sbjct: 384 LKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGK 443
Query: 234 LGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
L D+ + D N L+ G KA E + + C+P
Sbjct: 444 CNCLDHALATFDRMRMEGVQP-DAVTWNTLIDCHCKSGHHNKAEELFEAMQESGCSP 499
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 95/233 (40%), Gaps = 12/233 (5%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNL-SFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
Y+ L+H ++E+L+E S + L YN ++ +EK ++ +
Sbjct: 157 YSILIHALG------RSEKLYEAFLLSQRQTLTPLTYNALIGACARNDDLEKALNLMSRM 210
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQ--VKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
+R D Y+ I S T D ++K E+ D D + +N + +
Sbjct: 211 RRDGFPSDFVNYSFIIQSLTRTNKSDSSMLQKIYAEIESDKIELDG--QLLNDIIVGFAK 268
Query: 164 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 223
S VN S L + + + T +I G ++ + I++ L+ +R
Sbjct: 269 SGDVNRAMSFLAMVQGNGLSPKTATLVAVITALGNAGRTEEAEAIFEELKEGGLMPRTRA 328
Query: 224 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
Y +L Y+ G LK+ I+ + ++S S D + L+ A+++ G E A
Sbjct: 329 YNALLKGYVKTGSLKDAESIVSEMERSGFSP-DEHTYSLLIDAYANAGRWESA 380
Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 51/108 (47%), Gaps = 1/108 (0%)
Query: 42 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 101
+S Y AL++ YA +E+A F ++ L + L+ N ++ + + + V
Sbjct: 569 PSSTMYNALINAYAQRGLSEQAINAFRVMRADGLKPSVLVLNSLINAFGEDRRDAEAFSV 628
Query: 102 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDD 149
++ +K ++ PD+ TY + + D+V +EM+ SG + D
Sbjct: 629 LQYMKENDLKPDVVTYTTLMKALIRVEKFDKVPAVYEEMTL-SGCTPD 675
>gi|302826107|ref|XP_002994593.1| hypothetical protein SELMODRAFT_138846 [Selaginella moellendorffii]
gi|300137364|gb|EFJ04344.1| hypothetical protein SELMODRAFT_138846 [Selaginella moellendorffii]
Length = 521
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/244 (20%), Positives = 104/244 (42%), Gaps = 9/244 (3%)
Query: 31 ERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYM 90
+R + PL+ T LH+ AK +AE LF +++ N YN M+ +Y
Sbjct: 167 KRGYSPGPLACNT------FLHVLEDAKEYRRAEALFRDLEKYECEPNIDTYNRMIVIYG 220
Query: 91 SVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDW 150
G+ K ++ ++R P+I T+ +++ A + +++ D++ + D
Sbjct: 221 KAGEPSKAEMLYRSMRRAMCPPNICTFTALMNAFARQGLYREAERYFDKLQ-EFDYKPDH 279
Query: 151 VKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK 210
Y L+ Y A +++ ++++ LI Y G + ++I+K
Sbjct: 280 YAYNALMEAYSQGGSPAGA-LEIFQTMQRNGCFPDTVSHNILINAYGRAGLYEDAEKIFK 338
Query: 211 SLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDV 270
S++ ++ + +LS+Y G ++E E++ ++ T D N L+ A+
Sbjct: 339 SMQSAGFSPNLKSNMLLLSAYARAGRVEEAEELVSAMERDGTKP-DTLIYNSLINAYGVS 397
Query: 271 GLTE 274
G E
Sbjct: 398 GRHE 401
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/247 (20%), Positives = 102/247 (41%), Gaps = 8/247 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+TAL++ +A +AE F+++++ + + YN +M Y G + + +
Sbjct: 246 TFTALMNAFARQGLYREAERYFDKLQEFDYKPDHYAYNALMEAYSQGGSPAGALEIFQTM 305
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+R PD ++N+ I++ + +K M +G S + + L++ Y A
Sbjct: 306 QRNGCFPDTVSHNILINAYGRAGLYEDAEKIFKSMQ-SAGFSPNLKSNMLLLSAYARAGR 364
Query: 166 LVNAESSTLVEA-EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN- 223
+ AE LV A E+ T+ + Y+ LI Y G + ++ + + + K T +
Sbjct: 365 VEEAEE--LVSAMERDGTKPDTLIYNSLINAYGVSGRHEDMEALLAKMVKSSSKQTKPDI 422
Query: 224 --YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 281
Y ++ Y G + E+ + D + L+G ++ L K
Sbjct: 423 GTYNTLIQVYAQAGFIPRAEELFQGLARLKLVP-DATTWTALMGGYAKKKLYRKCTSILK 481
Query: 282 LLLQKNC 288
+L+ C
Sbjct: 482 KMLESGC 488
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 48/255 (18%), Positives = 109/255 (42%), Gaps = 18/255 (7%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
+TY ++ +Y A KAE L+ ++++ N + +M + G + ++
Sbjct: 210 DTYNRMIVIYGKAGEPSKAEMLYRSMRRAMCPPNICTFTALMNAFARQGLYREAERYFDK 269
Query: 105 IKRKNVVPDIFTYNLWI------SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 158
++ + PD + YN + S A L I Q + +G D V + L+N
Sbjct: 270 LQEFDYKPDHYAYNALMEAYSQGGSPAGALEIFQTMQ-------RNGCFPDTVSHNILIN 322
Query: 159 IYITASHLVNAESSTLVEAEKSITQRQWITYDFLII-LYAGLGNKDKIDQIWKSLRMTKQ 217
Y A +AE + ++ +S + + L++ YA G ++ +++ ++
Sbjct: 323 AYGRAGLYEDAEK--IFKSMQSAGFSPNLKSNMLLLSAYARAGRVEEAEELVSAMERDGT 380
Query: 218 KMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSAT--SDFDISACNRLLGAFSDVGLTEK 275
K + Y ++++Y + G +++ ++ + +S++ + DI N L+ ++ G +
Sbjct: 381 KPDTLIYNSLINAYGVSGRHEDMEALLAKMVKSSSKQTKPDIGTYNTLIQVYAQAGFIPR 440
Query: 276 ANEFHMLLLQKNCAP 290
A E L + P
Sbjct: 441 AEELFQGLARLKLVP 455
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 46/95 (48%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L+ +YA A + +AEELF+ + + L +A + +M Y K +++++
Sbjct: 424 TYNTLIQVYAQAGFIPRAEELFQGLARLKLVPDATTWTALMGGYAKKKLYRKCTSILKKM 483
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
D T + S+C + ++QV + ++ +
Sbjct: 484 LESGCRADAVTARVLFSACRSPEQVEQVTQLMESL 518
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 43/217 (19%), Positives = 78/217 (35%), Gaps = 36/217 (16%)
Query: 112 PDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES 171
PD+ YNL I + +LNI+ +K + M ++ + + L+N Y A AE
Sbjct: 102 PDLGCYNLLIDAYGKSLNIEDAEKTFNRMQ-EALCVPNEETFGVLINGYRLAGSFEKAEE 160
Query: 172 ----------------------------------STLVEAEKSITQRQWITYDFLIILYA 197
+ + EK + TY+ +I++Y
Sbjct: 161 LFVQMQKRGYSPGPLACNTFLHVLEDAKEYRRAEALFRDLEKYECEPNIDTYNRMIVIYG 220
Query: 198 GLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDI 257
G K + +++S+R + +++++ G +E D+ Q D
Sbjct: 221 KAGEPSKAEMLYRSMRRAMCPPNICTFTALMNAFARQGLYREAERYFDKL-QEFDYKPDH 279
Query: 258 SACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
A N L+ A+S G A E + + C P S
Sbjct: 280 YAYNALMEAYSQGGSPAGALEIFQTMQRNGCFPDTVS 316
>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 102/246 (41%), Gaps = 2/246 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
Y L+ K AE+LF + NL N + +N ++ Y G+V+ + E +
Sbjct: 103 VYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERM 162
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K++ V P I T+N +S I++ + L+E+ C+ G D Y + + + +
Sbjct: 163 KKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCN-GFVPDGFTYSIIFDGLLKSDD 221
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
A EA + T L+ G +K +++ KSL Y
Sbjct: 222 GAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYN 281
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 285
I++ Y +G + I+Q + I A N ++ F ++ + +KA E+ ++
Sbjct: 282 TIVNGYCQIGDMDRAILTIEQMESRGLRPNCI-AFNSVIDKFCEMQMIDKAEEWVKKMVG 340
Query: 286 KNCAPT 291
K AP+
Sbjct: 341 KGIAPS 346
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 107/255 (41%), Gaps = 6/255 (2%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
A + ETY L+ Y + ++ E ++++ N + Y ++ G++ + +
Sbjct: 344 APSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEM 403
Query: 101 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
V+ ++ + V+P+ YN+ I + + +F DEMS + G+ V Y +L+
Sbjct: 404 VLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGA-TIVTYNSLIKGL 462
Query: 161 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 220
L AE + ITY+ LI Y+ GN K +++++++ K T
Sbjct: 463 CKMGKLKEAEEMFFLITSTGHCP-DVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPT 521
Query: 221 SRNYICILSSYLMLG-HLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 279
+ ++S G LKE + ++ Q S D N ++ + + G +KA
Sbjct: 522 INTFHPLISGCSKEGIKLKET--LFNEMLQMNLSP-DRVVYNAMIHCYQETGHVQKAFSL 578
Query: 280 HMLLLQKNCAPTNAS 294
++ P N +
Sbjct: 579 QKEMVDMGVRPDNKT 593
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 97/233 (41%), Gaps = 16/233 (6%)
Query: 65 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 124
+LF+ + + L+Y M + +G ++ + E +KR+ VVP++F YN+ I
Sbjct: 52 DLFKEMVGLGFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGL 111
Query: 125 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR 184
I +K EMS + + V + L++ Y A V+ +K +
Sbjct: 112 CKEKRIRDAEKLFGEMSVRN-LVPNRVTFNTLIDGYCKAGE-VDVAIGLRERMKKEKVEP 169
Query: 185 QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLML--GHLKE--- 239
IT++ L+ +GL +I++ R ++ ++ +Y ++ G LK
Sbjct: 170 SIITFNSLL---SGLCKARRIEEA----RCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDG 222
Query: 240 VGEIIDQWKQSATSDFDIS--ACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
G +D ++++ I C+ LL G EKA E L++ P
Sbjct: 223 AGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVP 275
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 45/245 (18%), Positives = 100/245 (40%), Gaps = 3/245 (1%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y +++ Y ++A E+++ L N + +N ++ + + ++K V+++
Sbjct: 280 YNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMV 339
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
K + P + TYN+ I + + L+EM ++G + + Y +L+N +
Sbjct: 340 GKGIAPSVETYNILIDGYGRLCVFSRCFQILEEME-ENGEKPNVISYGSLINCLCKDGKI 398
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 226
+ AE + + I Y+ LI +G + + + + T Y
Sbjct: 399 LEAEMVLRDMVGRGVLPNANI-YNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNS 457
Query: 227 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 286
++ +G LKE E+ + D+ N L+ +S+ G ++K E + + +
Sbjct: 458 LIKGLCKMGKLKEAEEMFFLITSTGHCP-DVITYNSLISGYSNAGNSQKCLELYETMKKL 516
Query: 287 NCAPT 291
PT
Sbjct: 517 GLKPT 521
Score = 40.8 bits (94), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%)
Query: 64 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 123
E LF + Q NLS + ++YN M+ Y G V+K + +E+ V PD TYN I
Sbjct: 541 ETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILG 600
Query: 124 CAATLNIDQVKKFLDEM 140
+ + K +D+M
Sbjct: 601 HLKEGKLSETKDLVDDM 617
>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
Length = 939
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/233 (18%), Positives = 98/233 (42%), Gaps = 2/233 (0%)
Query: 62 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 121
+A E E ++ L N + Y+ +M Y +G E ++E ++RK + P++ TY L +
Sbjct: 236 QAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLV 295
Query: 122 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI 181
+++ ++ + EM D V Y ++N Y + +A + E +
Sbjct: 296 KGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDA-TRVRNEMRDAG 354
Query: 182 TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVG 241
Y+ +I LG +++ ++ + + + +Y ++ Y G +++
Sbjct: 355 IHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAF 414
Query: 242 EIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
E+ ++ + ++ N LL F + + A L+L++ AP S
Sbjct: 415 EMCRMMVRNGLAATTLTY-NTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEIS 466
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 99/232 (42%), Gaps = 4/232 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
Y A++ Y G WTE A + E +++ LS N + Y ++ Y G++E+ VV+E+
Sbjct: 255 AYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEM 314
Query: 106 KRK-NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
K ++V D Y + I+ +D + +EM D+G + Y ++N
Sbjct: 315 KETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMR-DAGIHVNLFVYNTMINGLCKLG 373
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
+ + L E E + +Y+ LI Y G+ K ++ + + T+ Y
Sbjct: 374 RMEEVQ-KVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTY 432
Query: 225 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
+L + L + + + + + +IS C+ LL G TE+A
Sbjct: 433 NTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEIS-CSTLLDGLFKAGKTEQA 483
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 104/239 (43%), Gaps = 17/239 (7%)
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
+K + + + N +M+N ++ G++ + E ++ K +PD FTY+
Sbjct: 682 DKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSL 741
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
I CAA+ +ID+ D M +G + + + Y +L+ + L A + K
Sbjct: 742 IHGCAASGSIDEAFSLRDVM-LSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKG 800
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLML------ 234
I+ ITY+ LI Y G K + +K KQKM + +Y +L
Sbjct: 801 ISP-NGITYNTLIDEYCKEG---KTTEAFK----LKQKMVEEGIQPTVITYSILIYGLCT 852
Query: 235 -GHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 292
G+++E +++DQ ++ I+ C L+ + G E+ ++ + + + PTN
Sbjct: 853 QGYMEEAIKLLDQMIENNVDPNYITYCT-LIHGYIKSGNMEEISKLYDEMHIRGLLPTN 910
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/121 (19%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY +L++ + +A LF +++ +S N + YN ++ Y G+ + + +++
Sbjct: 772 TYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKM 831
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ + P + TY++ I +++ K LD+M ++ +++ Y L++ YI + +
Sbjct: 832 VEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQM-IENNVDPNYITYCTLIHGYIKSGN 890
Query: 166 L 166
+
Sbjct: 891 M 891
Score = 37.4 bits (85), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 76/170 (44%), Gaps = 4/170 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY++L+H A + ++A L + + + L+ N + YN ++ G++ + + ++
Sbjct: 737 TYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKL 796
Query: 106 KRKNVVPDIFTYNLWISS-CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+ K + P+ TYN I C + K L + + G + Y L+ T
Sbjct: 797 QSKGISPNGITYNTLIDEYCKEGKTTEAFK--LKQKMVEEGIQPTVITYSILIYGLCTQG 854
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM 214
++ A L + ++ +ITY LI Y GN ++I +++ + +
Sbjct: 855 YMEEA-IKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHI 903
>gi|297737955|emb|CBI27156.3| unnamed protein product [Vitis vinifera]
Length = 625
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 113/260 (43%), Gaps = 9/260 (3%)
Query: 36 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 95
G P SA Y A + T+KA E+FER+K+ + Y ++ LY +
Sbjct: 271 GFPPSAVV---YNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKS 327
Query: 96 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 155
V E++ + P+I T+ +++ A ++ ++ +++ ++G D Y
Sbjct: 328 YMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQ-EAGLEPDVYAYNA 386
Query: 156 LVNIYITASHLVNA-ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM 214
L+ Y A A E +L++ R +Y+ ++ Y G + +++ ++
Sbjct: 387 LMEAYSRAGFPYGAAEIFSLMQHMGCEPDRA--SYNIMVDAYGRAGLHEDAQAVFEVMKR 444
Query: 215 TKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTE 274
T ++++ +LS+Y G + + EI++Q +S D N +L + +G E
Sbjct: 445 LGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKP-DTFVLNSMLNLYGRLGQFE 503
Query: 275 KANEFHMLLLQKNCAPTNAS 294
K E + ++K P + S
Sbjct: 504 KMEEV-LTAMEKGPYPADIS 522
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 89/202 (44%), Gaps = 37/202 (18%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNL-----SFNALM------------------- 81
T+TAL++ +A EKAEE+FE+++++ L ++NALM
Sbjct: 348 TFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLM 407
Query: 82 -----------YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 130
YN M+ Y G E V E +KR + P + ++ L +S+ + +
Sbjct: 408 QHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKV 467
Query: 131 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 190
+ ++ +++M SG D +++N+Y E L EK TY+
Sbjct: 468 AKCEEIVNQMH-KSGIKPDTFVLNSMLNLYGRLGQFEKME-EVLTAMEKGPYPADISTYN 525
Query: 191 FLIILYAGLGNKDKIDQIWKSL 212
LI +Y G +++++++SL
Sbjct: 526 ILINIYGRAGFFARMEELFRSL 547
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 49/248 (19%), Positives = 85/248 (34%), Gaps = 38/248 (15%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y L+ Y +KAE + + ++ Y ++ Y + G +EK V E++
Sbjct: 209 YNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAVFAEMR 268
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
+ P YN +I + + + + M D
Sbjct: 269 KYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDR---------------------- 306
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 226
Q TY LI LY +++ +R K K +
Sbjct: 307 ---------------CQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTA 351
Query: 227 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 286
+++++ G ++ EI +Q Q A + D+ A N L+ A+S G A E L+
Sbjct: 352 LVNAFAREGLCEKAEEIFEQL-QEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHM 410
Query: 287 NCAPTNAS 294
C P AS
Sbjct: 411 GCEPDRAS 418
Score = 45.1 bits (105), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 44/80 (55%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 102
T +++ LL Y+ A K EE+ ++ +S + + + N M+ LY +GQ EK+ V+
Sbjct: 450 TMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVL 509
Query: 103 EEIKRKNVVPDIFTYNLWIS 122
+++ DI TYN+ I+
Sbjct: 510 TAMEKGPYPADISTYNILIN 529
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein
[Arabidopsis lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 1164
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 108/250 (43%), Gaps = 7/250 (2%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
S TY +++ L +AEE F + + + ++Y ++ + G + +
Sbjct: 739 SYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFY 798
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
E+ +++ PD+ TY IS ++ + K EM C G D + + L+N Y A
Sbjct: 799 EMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLC-RGLEPDIITFTELMNGYCKA 857
Query: 164 SHLVNA--ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 221
H+ +A + +++A S +TY LI G+ D +++ + +
Sbjct: 858 GHIKDAFRVHNHMIQAGCS---PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNI 914
Query: 222 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 281
Y I++ G+++E +++ ++ ++A + D L+ A+ G +KA E
Sbjct: 915 FTYNSIVNGLCKSGNIEEAVKLVGEF-EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILT 973
Query: 282 LLLQKNCAPT 291
+L K PT
Sbjct: 974 EMLGKGLQPT 983
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 90/201 (44%), Gaps = 8/201 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+T L++ Y A + A + + Q+ S N + Y ++ G ++ ++ E+
Sbjct: 846 TFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM 905
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ + P+IFTYN ++ + NI++ K + E +G + D V Y L++ Y +
Sbjct: 906 WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA-AGLNADTVTYTTLMDAYCKSGE 964
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLI---ILYAGLGNKDKIDQIWKSLRMTKQKMTSR 222
+ A+ L E Q +T++ L+ L+ L + +K+ W + T+
Sbjct: 965 MDKAQ-EILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLN-WMLAKGIAPNATTF 1022
Query: 223 NYICILSSYLMLGHLKEVGEI 243
N C++ Y + +LK I
Sbjct: 1023 N--CLVKQYCIRNNLKAATAI 1041
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 48/255 (18%), Positives = 98/255 (38%), Gaps = 5/255 (1%)
Query: 36 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 95
GL LS + Y A L T A +F + + +N YN ++ +G++
Sbjct: 628 GLVLSVDSCNVYLA--RLSKDCNKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRI 685
Query: 96 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 155
+ ++ ++ K PD+ +Y+ I+ +D+V K +++M G + Y +
Sbjct: 686 NEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMK-QKGLKPNSYTYGS 744
Query: 156 LVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMT 215
++ + L AE + + I I Y L+ + G+ + + +
Sbjct: 745 IIGLLCRICKLAEAEEAFSEMIGQGILPDT-IVYTTLVDGFCKRGDIRAASKFFYEMHSR 803
Query: 216 KQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEK 275
Y I+S + +G + E G++ + DI L+ + G +
Sbjct: 804 DITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEP-DIITFTELMNGYCKAGHIKD 862
Query: 276 ANEFHMLLLQKNCAP 290
A H ++Q C+P
Sbjct: 863 AFRVHNHMIQAGCSP 877
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 41/234 (17%), Positives = 96/234 (41%), Gaps = 3/234 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+Y ++H +A L ++ + + + Y+ ++ Y G+++KV ++E++
Sbjct: 671 SYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKM 730
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K+K + P+ +TY I + + ++ EM G D + Y LV+ +
Sbjct: 731 KQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEM-IGQGILPDTIVYTTLVDGFCKRGD 789
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ A S E +TY +I + +G+ + +++ + + +
Sbjct: 790 -IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFT 848
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 279
+++ Y GH+K+ + + Q+ S ++ L+ G + ANE
Sbjct: 849 ELMNGYCKAGHIKDAFRVHNHMIQAGCSP-NVVTYTTLIDGLCKEGDLDSANEL 901
Score = 40.4 bits (93), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 57/136 (41%), Gaps = 2/136 (1%)
Query: 34 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 93
FE L+A T TYT L+ Y + +KA+E+ + L + +N +M + G
Sbjct: 940 FEAAGLNADTV-TYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHG 998
Query: 94 QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKY 153
+E ++ + K + P+ T+N + N+ +M C G D Y
Sbjct: 999 MLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDM-CSRGVEPDGKTY 1057
Query: 154 VNLVNIYITASHLVNA 169
NLV + A ++ A
Sbjct: 1058 ENLVKGHCNARNMKEA 1073
>gi|356563451|ref|XP_003549976.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
chloroplastic-like [Glycine max]
Length = 714
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
+T TA++ +Y A+W+ A EL++R+K++ + ++YN ++ + VG VE+ + +
Sbjct: 365 KTLTAVIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRD 424
Query: 105 IKRK-NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSG 145
+K+ + PD ++Y ++ + ++D+ K +EM C SG
Sbjct: 425 MKQSAHCKPDSWSYTAMLNIYGSQGDVDKAMKLFNEM-CKSG 465
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 99/241 (41%), Gaps = 5/241 (2%)
Query: 36 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 95
G+PL + TY+ ++ +KA FER+ +++L + + Y+ ++ +Y +G+V
Sbjct: 219 GVPLD---NITYSTIISCAKKCNLYDKAVHWFERMYKTSLMPDEVTYSAILDVYARLGKV 275
Query: 96 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 155
E+V + E + PD T+++ + D ++ EM G + V Y
Sbjct: 276 EEVISLYERGRATGWKPDPITFSVLGKMFGEAGDYDGIRYVFQEME-SVGVQPNLVVYNT 334
Query: 156 LVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMT 215
L+ A V A E I + + I ++D + ++W+ ++
Sbjct: 335 LLEAMGKAGKPVFARGLFEEMIELGIVPNEKTLTAVIKIYGKARWSRDAL-ELWQRMKEN 393
Query: 216 KQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEK 275
M Y +L+ +G ++E + KQSA D + +L + G +K
Sbjct: 394 GWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSAHCKPDSWSYTAMLNIYGSQGDVDK 453
Query: 276 A 276
A
Sbjct: 454 A 454
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 108/251 (43%), Gaps = 16/251 (6%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+ L+ A +A E + + +++ + ++N ++ G ++ + E +
Sbjct: 64 TFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENM 123
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGS-DDWVKYVNLVNIYITAS 164
+ V P+I TYN IS + N+++ ++ L+EM G S D V Y L+N + AS
Sbjct: 124 ESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRAS 183
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLI--ILYAGL---GNKDKIDQIWKSLRMTKQKM 219
+ E+ E K+ I D L IL +G+ G+ ++ +I +++
Sbjct: 184 RI--REACAFREKMKA----AGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVP 237
Query: 220 TSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 279
Y I+ + + G + E EI+ S D+ N LL F G+ +A E
Sbjct: 238 DVITYNSIIHALCVAGKVVEAAEILKTMSCSP----DLVTFNTLLDGFCKAGMLPRALEV 293
Query: 280 HMLLLQKNCAP 290
+ ++N P
Sbjct: 294 LEEMCRENILP 304
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 105/252 (41%), Gaps = 17/252 (6%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+ LL + A +A E+ E + + N+ + + Y ++ VGQV+ ++EEI
Sbjct: 273 TFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEI 332
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
R+ +PD+ Y + + I++ K + EMS G V Y +LV+ Y A +
Sbjct: 333 VRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSV-RGCRTGVVMYSSLVSGYCRAGN 391
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
V+ L E TY+ + LG K I K++ + + +R Y+
Sbjct: 392 -VHKAREILAEMVSINMVPPLFTYNIV------LGGLIKDGSISKAVSLISD-LVARGYV 443
Query: 226 CILSSYLML-------GHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 278
+ +Y L ++E ++ D+ D++ + + G VG + A
Sbjct: 444 PDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFG-LCRVGRVDDAWS 502
Query: 279 FHMLLLQKNCAP 290
+ + +K AP
Sbjct: 503 LVVEMSRKRHAP 514
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 109/260 (41%), Gaps = 22/260 (8%)
Query: 40 SAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVA 99
SA TY L++ + A +A E++K + ++ + L N +++ G VE+
Sbjct: 165 SAPDIVTYNTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEAL 224
Query: 100 LVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 159
+++ +K VPD+ TYN I + + + + L MSC S D V + L++
Sbjct: 225 EILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTMSC----SPDLVTFNTLLDG 280
Query: 160 YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 219
+ A L A L E + ITY IL GL ++ Q+ + + +++
Sbjct: 281 FCKAGMLPRA-LEVLEEMCRENILPDVITY---TILVNGLC---RVGQVQVAFYLL-EEI 332
Query: 220 TSRNYICILSSYL-MLGHLKEVGEIIDQWKQSATSDFDISAC-------NRLLGAFSDVG 271
+ YI + +Y ++ L + GEI + K + + C + L+ + G
Sbjct: 333 VRQGYIPDVIAYTSLVDGLCKSGEIEEAHK--LVKEMSVRGCRTGVVMYSSLVSGYCRAG 390
Query: 272 LTEKANEFHMLLLQKNCAPT 291
KA E ++ N P
Sbjct: 391 NVHKAREILAEMVSINMVPP 410
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 37/181 (20%), Positives = 74/181 (40%), Gaps = 7/181 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
YT+L+ + E+A +L + + +MY+ +++ Y G V K ++ E+
Sbjct: 343 AYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEM 402
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
N+VP +FTYN+ + +I + + ++ G D V Y L++ A+
Sbjct: 403 VSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVA-RGYVPDVVTYNTLIDGLCKANR 461
Query: 166 LVNAESSTLVEAEKSITQRQWITYDF-LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
+ A + + R D L + GL ++D W + +K + N
Sbjct: 462 VREA-----CDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNV 516
Query: 225 I 225
+
Sbjct: 517 V 517
>gi|297852926|ref|XP_002894344.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297340186|gb|EFH70603.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 650
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 73/148 (49%), Gaps = 5/148 (3%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGL---PLSAKTSETYTALLHLYAGAKWTEKAEELFERV 70
Y+ + ++K+ + R F + P+ + ++Y ++L GA T +A E+ ++
Sbjct: 375 YSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGE-RDSYMSMLESLCGAGKTIEAIEMLSKI 433
Query: 71 KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 130
+ + + +MYN + + + Q+ + + E++K+ PDIFTYN+ ISS +
Sbjct: 434 HEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILISSFGRVGEV 493
Query: 131 DQVKKFLDEMSCDSGGSDDWVKYVNLVN 158
D+ +E+ S D + Y +L+N
Sbjct: 494 DEAINIFEELE-RSDCKPDIISYNSLIN 520
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 66/147 (44%), Gaps = 2/147 (1%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y + K +LFE++K+ S + YN +++ + VG+V++ + EE++
Sbjct: 445 YNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILISSFGRVGEVDEAINIFEELE 504
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
R + PDI +YN I+ ++D+ EM + G + D V Y L+ + +
Sbjct: 505 RSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQ-EKGLNPDVVTYSTLMECF-GKTER 562
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLI 193
V S E Q +TY+ L+
Sbjct: 563 VEMAYSLFEEMLVKGCQPNIVTYNILL 589
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 104/240 (43%), Gaps = 11/240 (4%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
S TY LL Y ++ + KA +++ +++ + YN ++ ++ + EK V E
Sbjct: 203 SFTYKCLLQAYLRSRDSSKAFDVYCEIRRGGHKLDIFAYNMLLD---ALAKDEKACQVFE 259
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
++K+++ D ++Y + I + D+ +EM + G + + V Y L+ + +
Sbjct: 260 DMKKRHCRRDEYSYTIMIRTMGRIGKYDEAVGLFNEMITE-GLTLNVVGYNTLMQV-LAK 317
Query: 164 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 223
+V+ ++ + TY ++ L G ++D I + ++K+ MT
Sbjct: 318 GKMVDKAIQVFSRMVETGCRPNEYTYSLVLNLLVAEGQLVRLDGI---VEISKRYMTQGI 374
Query: 224 YICILSSYLMLGHLKEVGEII-DQWKQSATSDFD--ISACNRLLGAFSDVGLTEKANEFH 280
Y ++ + LGH+ E + D W + D +S L GA + E ++ H
Sbjct: 375 YSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIH 434
Score = 40.8 bits (94), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 89/207 (42%), Gaps = 5/207 (2%)
Query: 4 HKEFVLSDSD-YATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWT 60
H++ V++D+ Y T + K+ I FE + + + TY L+ +
Sbjct: 434 HEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILISSFGRVGEV 493
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
++A +FE +++S+ + + YN ++ G V++ + +E++ K + PD+ TY+
Sbjct: 494 DEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTL 553
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
+ T ++ +EM G + V Y L++ + A ++
Sbjct: 554 MECFGKTERVEMAYSLFEEMLV-KGCQPNIVTYNILLDCLEKSGRTAEAVDLYTKMKQQG 612
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQ 207
+T ITY L L +G K +I +
Sbjct: 613 LTP-DSITYTVLERLQSGSHGKSRIRR 638
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 114/250 (45%), Gaps = 23/250 (9%)
Query: 35 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 94
EGL L+ Y L+ + A K +KA ++F R+ ++ N Y+ ++ L ++ GQ
Sbjct: 299 EGLTLNVVG---YNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLVLNLLVAEGQ 355
Query: 95 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKK-FLDEMSCDSGGSDDWVKY 153
+ ++ +V EI ++ + I++Y + + + ++ + + F D S G D Y
Sbjct: 356 LVRLDGIV-EISKRYMTQGIYSY--LVRTLSKLGHVSEAHRLFCDMWSFPVKGERD--SY 410
Query: 154 VNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLI-ILYAGLGNKDKIDQIWKSL 212
++++ A + A +E I ++ +T + +++ LG +I I
Sbjct: 411 MSMLESLCGAGKTIEA-----IEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLF 465
Query: 213 RMTKQKMTSRN---YICILSSYLMLGHLKEVGEIIDQWKQSATSDF--DISACNRLLGAF 267
K+ S + Y ++SS+ G + EV E I+ +++ SD DI + N L+
Sbjct: 466 EKMKKDGPSPDIFTYNILISSF---GRVGEVDEAINIFEELERSDCKPDIISYNSLINCL 522
Query: 268 SDVGLTEKAN 277
G ++A+
Sbjct: 523 GKNGDVDEAH 532
>gi|302794005|ref|XP_002978767.1| hypothetical protein SELMODRAFT_109632 [Selaginella moellendorffii]
gi|300153576|gb|EFJ20214.1| hypothetical protein SELMODRAFT_109632 [Selaginella moellendorffii]
Length = 521
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/244 (20%), Positives = 104/244 (42%), Gaps = 9/244 (3%)
Query: 31 ERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYM 90
+R + PL+ T LH+ AK +AE LF +++ N YN M+ +Y
Sbjct: 167 KRGYSPGPLACNT------FLHVLEDAKEYRRAEALFRDLEKYECEPNIDTYNRMIVIYG 220
Query: 91 SVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDW 150
G+ K ++ ++R P+I T+ +++ A + +++ D++ + D
Sbjct: 221 KAGEPSKAEMLYRSMRRAMCPPNICTFTALMNAFARQGLYREAERYFDKLQ-EFDYKPDH 279
Query: 151 VKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK 210
Y L+ Y A +++ ++++ LI Y G + ++I+K
Sbjct: 280 YAYNALMEAYSQGGSPAGA-LEIFQTMQRNGCFPDTVSHNILINAYGRAGLYEDAEKIFK 338
Query: 211 SLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDV 270
S++ ++ + +LS+Y G ++E E++ ++ T D N L+ A+
Sbjct: 339 SMQSAGFSPNLKSNMLLLSAYARAGRVEEAEELVSAMERDGTKP-DTLIYNALINAYGVS 397
Query: 271 GLTE 274
G E
Sbjct: 398 GRHE 401
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/247 (20%), Positives = 103/247 (41%), Gaps = 8/247 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+TAL++ +A +AE F+++++ + + YN +M Y G + + +
Sbjct: 246 TFTALMNAFARQGLYREAERYFDKLQEFDYKPDHYAYNALMEAYSQGGSPAGALEIFQTM 305
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+R PD ++N+ I++ + +K M +G S + + L++ Y A
Sbjct: 306 QRNGCFPDTVSHNILINAYGRAGLYEDAEKIFKSMQ-SAGFSPNLKSNMLLLSAYARAGR 364
Query: 166 LVNAESSTLVEA-EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN- 223
+ AE LV A E+ T+ + Y+ LI Y G + ++ + + + K T +
Sbjct: 365 VEEAEE--LVSAMERDGTKPDTLIYNALINAYGVSGRHEDMEALLAKMVKSSSKQTKPDI 422
Query: 224 --YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 281
Y ++ Y G + + E+ + D + L+G ++ L K
Sbjct: 423 GTYNTLIQVYAQAGFIPKAEELFQGLARLKLVP-DATTWTALMGGYAKKKLYRKCTSILK 481
Query: 282 LLLQKNC 288
+L+ C
Sbjct: 482 KMLESGC 488
Score = 44.7 bits (104), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 49/255 (19%), Positives = 109/255 (42%), Gaps = 18/255 (7%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
+TY ++ +Y A KAE L+ ++++ N + +M + G + ++
Sbjct: 210 DTYNRMIVIYGKAGEPSKAEMLYRSMRRAMCPPNICTFTALMNAFARQGLYREAERYFDK 269
Query: 105 IKRKNVVPDIFTYNLWI------SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 158
++ + PD + YN + S A L I Q + +G D V + L+N
Sbjct: 270 LQEFDYKPDHYAYNALMEAYSQGGSPAGALEIFQTMQ-------RNGCFPDTVSHNILIN 322
Query: 159 IYITASHLVNAESSTLVEAEKSITQRQWITYDFLII-LYAGLGNKDKIDQIWKSLRMTKQ 217
Y A +AE + ++ +S + + L++ YA G ++ +++ ++
Sbjct: 323 AYGRAGLYEDAEK--IFKSMQSAGFSPNLKSNMLLLSAYARAGRVEEAEELVSAMERDGT 380
Query: 218 KMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSAT--SDFDISACNRLLGAFSDVGLTEK 275
K + Y ++++Y + G +++ ++ + +S++ + DI N L+ ++ G K
Sbjct: 381 KPDTLIYNALINAYGVSGRHEDMEALLAKMVKSSSKQTKPDIGTYNTLIQVYAQAGFIPK 440
Query: 276 ANEFHMLLLQKNCAP 290
A E L + P
Sbjct: 441 AEELFQGLARLKLVP 455
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 46/95 (48%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L+ +YA A + KAEELF+ + + L +A + +M Y K +++++
Sbjct: 424 TYNTLIQVYAQAGFIPKAEELFQGLARLKLVPDATTWTALMGGYAKKKLYRKCTSILKKM 483
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
D T + S+C + ++QV + ++ +
Sbjct: 484 LESGCRADAVTARVLFSACRSPEQVEQVTQLMESL 518
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 43/217 (19%), Positives = 78/217 (35%), Gaps = 36/217 (16%)
Query: 112 PDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES 171
PD+ YNL I + +LNI+ +K + M ++ + + L+N Y A AE
Sbjct: 102 PDLGCYNLLIDAYGKSLNIEDAEKTFNRMQ-EALCVPNEETFGVLINGYRLAGSFEKAEE 160
Query: 172 ----------------------------------STLVEAEKSITQRQWITYDFLIILYA 197
+ + EK + TY+ +I++Y
Sbjct: 161 LFVQMQKRGYSPGPLACNTFLHVLEDAKEYRRAEALFRDLEKYECEPNIDTYNRMIVIYG 220
Query: 198 GLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDI 257
G K + +++S+R + +++++ G +E D+ Q D
Sbjct: 221 KAGEPSKAEMLYRSMRRAMCPPNICTFTALMNAFARQGLYREAERYFDKL-QEFDYKPDH 279
Query: 258 SACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
A N L+ A+S G A E + + C P S
Sbjct: 280 YAYNALMEAYSQGGSPAGALEIFQTMQRNGCFPDTVS 316
>gi|297823043|ref|XP_002879404.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325243|gb|EFH55663.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 605
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 86/187 (45%), Gaps = 4/187 (2%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 102
+S TY AL+ AE L ++ ++ +++N ++ Y G +++ +++
Sbjct: 344 SSHTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLINGYCRKGMIDEASMIY 403
Query: 103 EEIKRKNVVPDIFTYNLWISSCAATL-NIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 161
+ +++K D+FT N I+SC L D+ K++L M + G V Y NL+++Y
Sbjct: 404 DVMEKKGFQADVFTCNT-IASCFNRLKRYDEAKQWLFRM-MEGGVRLSTVSYTNLIDVYC 461
Query: 162 TASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 221
++ A+ VE Q ITY+ +I Y G + ++W +++ S
Sbjct: 462 KEGNVEEAKR-LFVEMSSKEVQPNAITYNVMIYAYCKQGKVKEARKLWANMKANGMDPDS 520
Query: 222 RNYICIL 228
Y ++
Sbjct: 521 YTYTSLI 527
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 45/96 (46%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+YT L+ +Y E+A+ LF + + NA+ YN M+ Y G+V++ + +
Sbjct: 452 SYTNLIDVYCKEGNVEEAKRLFVEMSSKEVQPNAITYNVMIYAYCKQGKVKEARKLWANM 511
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 141
K + PD +TY I N+D+ + EM
Sbjct: 512 KANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMG 547
>gi|255641788|gb|ACU21163.1| unknown [Glycine max]
Length = 481
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 127/282 (45%), Gaps = 14/282 (4%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLS--AKTSETYTALLHLYAGAKWTEKAEELFERVK 71
YA+ ++ + I G R +P S K + LL LYA + + A +LF+++
Sbjct: 93 YASLLETCYRFQAILHGIRVHRLIPTSLLHKNVGISSKLLRLYASCGYLDDAHDLFDQMA 152
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
+ + S A +N +++ Y VG ++ + ++ + V D+FT+ + CA ++
Sbjct: 153 KRDTS--AFPWNSLISGYAQVGHYDEAIALYFQMVEEGVEADLFTFPRVLKVCAGIGSV- 209
Query: 132 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 191
QV + + + +G + D LV++Y +V A + + R ++++
Sbjct: 210 QVGEEVHRHAIRAGFAADGFILNALVDMYSKCGDIVKAR-----KVFDKMPHRDPVSWNS 264
Query: 192 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 251
++ Y G + + I++ + + + S + +L+ LG +G I W S
Sbjct: 265 MLTAYVHHGLEVQAMNIFRQMLLEGCEPDSVSISTVLTGVSSLG----LGVQIHGWVISQ 320
Query: 252 TSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNA 293
++++S N L+ +S+ G EKA L+ +++ N+
Sbjct: 321 GHEWNLSIANSLIMMYSNHGRLEKARWVFNLMPERDVVSWNS 362
>gi|359497557|ref|XP_003635566.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17670-like, partial [Vitis vinifera]
Length = 253
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 96/214 (44%), Gaps = 3/214 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT L+ K +A L E + ++ + +YN +M Y + + + V +++
Sbjct: 22 TYTILIDNVCNGKNLREATRLLEVLGEAGFKPDCYVYNTIMKGYCILDKGSEAIGVYKKM 81
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K + V PD+ TYN I + + + + +KFLD M+ + G D V Y +L+N +
Sbjct: 82 KEEGVEPDLVTYNTLIFGLSKSGRVKEARKFLDIMA-EMGHFPDAVTYTSLMNGLCREGN 140
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ A + L E E TY+ L+ L ++ +++ ++ K+ +Y
Sbjct: 141 ALGA-LALLEEMEAKGCSPNSCTYNTLLHGLCKLRMLERGIELYGVMKSGGMKLEKASYA 199
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISA 259
+ + G + E E D +S + D D++A
Sbjct: 200 TFVRALCKEGRVAEAYEAFDYVVESKSFD-DVTA 232
>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 920
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/233 (18%), Positives = 98/233 (42%), Gaps = 2/233 (0%)
Query: 62 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 121
+A E E ++ L N + Y+ +M Y +G E ++E ++RK + P++ TY L +
Sbjct: 236 QAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLV 295
Query: 122 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI 181
+++ ++ + EM D V Y ++N Y + +A + E +
Sbjct: 296 KGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDA-TRVRNEMRDAG 354
Query: 182 TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVG 241
Y+ +I LG +++ ++ + + + +Y ++ Y G +++
Sbjct: 355 IHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAF 414
Query: 242 EIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
E+ ++ + ++ N LL F + + A L+L++ AP S
Sbjct: 415 EMCRMMVRNGLAATTLTY-NTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEIS 466
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 99/232 (42%), Gaps = 4/232 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
Y A++ Y G WTE A + E +++ LS N + Y ++ Y G++E+ VV+E+
Sbjct: 255 AYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEM 314
Query: 106 KRK-NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
K ++V D Y + I+ +D + +EM D+G + Y ++N
Sbjct: 315 KETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMR-DAGIHVNLFVYNTMINGLCKLG 373
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
+ + L E E + +Y+ LI Y G+ K ++ + + T+ Y
Sbjct: 374 RMEEVQ-KVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTY 432
Query: 225 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
+L + L + + + + + +IS C+ LL G TE+A
Sbjct: 433 NTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEIS-CSTLLDGLFKAGKTEQA 483
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 99/232 (42%), Gaps = 22/232 (9%)
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
+K + + + N +M+N ++ G++ + E ++ K +PD FTY+
Sbjct: 682 DKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSL 741
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
I CAA+ +ID+ D M +G + + + Y +L+ + L A + K
Sbjct: 742 IHGCAASGSIDEAFSLRDVM-LSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKG 800
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 240
I+ ITY+ LI Y G K + +K KQKM G+++E
Sbjct: 801 ISP-NGITYNTLIDEYCKEG---KTTEAFK----LKQKMVEE------------GYMEEA 840
Query: 241 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 292
+++DQ ++ I+ C L+ + G E+ ++ + + + PTN
Sbjct: 841 IKLLDQMIENNVDPNYITYCT-LIHGYIKSGNMEEISKLYDEMHIRGLLPTN 891
Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 25/122 (20%), Positives = 53/122 (43%), Gaps = 16/122 (13%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ----------- 94
TY +L++ + +A LF +++ +S N + YN ++ Y G+
Sbjct: 772 TYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKM 831
Query: 95 -----VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDD 149
+E+ +++++ NV P+ TY I + N++++ K DEM +
Sbjct: 832 VEEGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPTN 891
Query: 150 WV 151
W+
Sbjct: 892 WI 893
>gi|387193283|gb|AFJ68696.1| hypothetical protein NGATSA_2008400, partial [Nannochloropsis
gaditana CCMP526]
Length = 501
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 114/276 (41%), Gaps = 14/276 (5%)
Query: 4 HKEFVLSDSDYATRIDLMTKV-FGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEK 62
H F D +AT ++L +V G G R T T AL +G KW +
Sbjct: 94 HAMFACLDRHWATALELFHEVESGAVPGVRM--------DTGTTMAALGACRSGKKW-QL 144
Query: 63 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 122
A + E + + + +++N ++ +Y + Q KV +EE++ V PD FTYN I
Sbjct: 145 ASAILESARAQEVELSLVLFNAVLGVYAAAQQTGKVLETLEEMRFLGVRPDEFTYNTAIG 204
Query: 123 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT 182
+ A + Q ++L M+ + G S V Y +N + A + E
Sbjct: 205 AFAKVGDYRQAGQWLSIMTWE-GVSASTVTYNCALNACANGGNPQRA-AELFQEMRDRKV 262
Query: 183 QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI-CILSSYLMLGHLKEVG 241
+TY L+ +A G + + +R + + N++ C S G+ E+
Sbjct: 263 GVDHVTYGTLVHAFAKAGQWEGALRYLDEMRQSTSGIKPNNFVYCSAMSACNRGNESEMA 322
Query: 242 -EIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
+++DQ ++ D + N L A + GL +A
Sbjct: 323 LKLLDQMREVDGLVPDQYSVNEALNACAKGGLCARA 358
>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
Length = 1023
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 102/257 (39%), Gaps = 15/257 (5%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
+ + LLH +A T+ + F+ + + YN M+ G +E + + E
Sbjct: 98 TRSCNGLLHKFARLGKTDGMKRFFKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFE 157
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE---MSCDSGGSDDWVKYVNLVNIY 160
E+K + ++PD TYN I +D F +E MSC+ D + Y L+N +
Sbjct: 158 EMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEP----DVITYNTLINCF 213
Query: 161 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK---SLRMTKQ 217
L E ++S + ++Y L+ + +D + Q K +R
Sbjct: 214 CKFGKLPKG-LEFFREMKQSGLKPNVVSYSTLVDAFC---KEDMMQQALKFYVDMRRLGL 269
Query: 218 KMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 277
Y ++ +Y +G+L + + D+ Q ++++ L+ DV ++A
Sbjct: 270 VPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGV-EWNVVTYTALIDGLCDVERIKEAE 328
Query: 278 EFHMLLLQKNCAPTNAS 294
E ++ P AS
Sbjct: 329 ELFGKMVTAGVIPNLAS 345
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 3/132 (2%)
Query: 31 ERYFEGL--PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTL 88
+R+F+ + S T TY ++ E A LFE +K L + + YN M+
Sbjct: 118 KRFFKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDG 177
Query: 89 YMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSD 148
Y VG+++ EE+K + PD+ TYN I+ + + +F EM SG
Sbjct: 178 YGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMK-QSGLKP 236
Query: 149 DWVKYVNLVNIY 160
+ V Y LV+ +
Sbjct: 237 NVVSYSTLVDAF 248
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 58/118 (49%), Gaps = 1/118 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYTAL+ + ++AEELF ++ + + N Y ++ ++ +++ +++E+
Sbjct: 310 TYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEM 369
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
K + + PD+ Y +I S I+ K ++EM + G + Y L++ Y +
Sbjct: 370 KGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQ-EKGIKANTFIYTTLMDAYFKS 426
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 2/106 (1%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVK 71
Y ID + V I E F + + +YTAL+H + AK ++A EL + +K
Sbjct: 311 YTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMK 370
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTY 117
+ + L+Y + + ++E +V+ E++ K + + F Y
Sbjct: 371 GRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIY 416
Score = 37.4 bits (85), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 42/100 (42%), Gaps = 1/100 (1%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQS-NLSFNALMYNEMMTLYMSVGQVEKVALV 101
T+ T+ L+ K KA + F R+ L NA +Y M+ QVE +
Sbjct: 447 TAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAATTL 506
Query: 102 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 141
E++ +K +VPD Y I N+ Q D+M+
Sbjct: 507 FEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQALALRDKMA 546
>gi|218199303|gb|EEC81730.1| hypothetical protein OsI_25362 [Oryza sativa Indica Group]
Length = 583
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 106/254 (41%), Gaps = 15/254 (5%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
++ Y ++ LYA ++A LF +++ +A +YN ++ + GQ ++E
Sbjct: 11 NDIYGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIME 70
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
++ R + P TYN I++C A N + + +M+ + G D LV I
Sbjct: 71 DMLRAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPD-------LVTHNIVL 123
Query: 164 SHLVNAESSTLVEAEKSITQRQWITYD-----FLIILYAGLGNKDKIDQIWKSLRMTKQK 218
S L N + + I + +T D +I +G + +++ S+R + K
Sbjct: 124 SALKNGAQYSKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTK 183
Query: 219 MTSR--NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
Y I+ SY + G ++ I D +I A N LLGA++ G+ +A
Sbjct: 184 CPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKP-NIVAYNSLLGAYASRGMHREA 242
Query: 277 NEFHMLLLQKNCAP 290
L+ + P
Sbjct: 243 LAIFNLIKKNGLRP 256
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 55/93 (59%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+YT+LL+ Y + EKA E+F ++K+++ N + YN ++ Y S G +++ ++ E+
Sbjct: 260 SYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEM 319
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLD 138
++ + PD+ + + +++C I +++ L+
Sbjct: 320 EKDGIQPDVVSISTLLAACGRCRQITRIETILE 352
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 97/226 (42%), Gaps = 3/226 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT+++H Y E + +F+ + + N + YN ++ Y S G + + I
Sbjct: 190 TYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLI 249
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K+ + PDI +Y +++ + ++ ++ ++M +S + V Y L++ Y +A
Sbjct: 250 KKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNK-VSYNALIDAYGSAGM 308
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
L A L E EK Q ++ L+ +I+ I ++ R + + Y
Sbjct: 309 LKEA-VGLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYN 367
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 271
+ SYL G ++ E+ ++S D N L+ S +G
Sbjct: 368 SGIKSYLSFGDYEKALELYTSMRESNVKP-DAVTYNILISGSSKLG 412
>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 91/206 (44%), Gaps = 2/206 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY +L+ Y K KA+ + + Q ++ + YN ++ + + +V++ + +E+
Sbjct: 304 TYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEM 363
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K+++PD+ TYN I I K +DEM D G D + Y ++++ + +H
Sbjct: 364 HHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMH-DRGVPPDIITYSSILDA-LCKNH 421
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
V+ + L + + + TY LI G + I++ L + +T Y
Sbjct: 422 QVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYT 481
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSA 251
++ + G E ++ + K ++
Sbjct: 482 VMIHGFCNKGLFDEALALLSKMKDNS 507
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 32/163 (19%), Positives = 71/163 (43%), Gaps = 5/163 (3%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
++Y L+ + K ++A LF+ + ++ + + YN ++ +G++ +V+E
Sbjct: 338 QSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDE 397
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+ + V PDI TY+ + + +D+ L ++ D G + Y L++
Sbjct: 398 MHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLK-DQGIRPNMYTYTILIDGLCKGG 456
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQ 207
L +A + E + + IT + ++ G NK D+
Sbjct: 457 RLEDAHNI----FEDLLVKGYNITVNTYTVMIHGFCNKGLFDE 495
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/230 (17%), Positives = 92/230 (40%), Gaps = 3/230 (1%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y+ ++ K A +L+ + +S N + Y+ +++ + +VGQ++ + ++
Sbjct: 200 YSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMI 259
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
+N+ PD++T+N+ + + + K M G + V Y +L++ Y
Sbjct: 260 LENIKPDVYTFNILVDGFCKDGKMKEGKTVF-AMMMKQGIKPNVVTYCSLMDGYCLVKE- 317
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 226
VN S L + +Y+ LI + + D+ ++K + Y
Sbjct: 318 VNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNS 377
Query: 227 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
++ LG + +++D+ DI + +L A +KA
Sbjct: 378 LIDGLCKLGKISYALKLVDEMHDRGVPP-DIITYSSILDALCKNHQVDKA 426
>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 72/154 (46%), Gaps = 4/154 (2%)
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
EKA ++ + + + Y+E++ + +VE + +E+K VVPD++TY +
Sbjct: 471 EKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTIL 530
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL-VNAESSTLVEAEK 179
I + I Q +LDEM D G V Y L++ Y+ A + V E L+ A+
Sbjct: 531 IDCFSKAGIIKQAHNWLDEMVRD-GCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKG 589
Query: 180 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 213
ITY LI Y GN +K QI+ +R
Sbjct: 590 CFP--NVITYTALIDGYCKSGNIEKACQIYARMR 621
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 47/94 (50%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
YT ++ + T++A +L +++ N + Y M+ + G+V+K + E+
Sbjct: 753 YTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMG 812
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
K P+ TY + I+ C AT ++D+ L+EM
Sbjct: 813 SKGCAPNFVTYTVLINHCCATGHLDEAYALLEEM 846
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 100/270 (37%), Gaps = 29/270 (10%)
Query: 42 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 101
T TYT L+H Y AK A ELFE + N + Y ++ Y G +EK +
Sbjct: 557 PTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQI 616
Query: 102 VEEIK--------------RKNVV--PDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSG 145
++ + NV P++ TY + + + L+ M D G
Sbjct: 617 YARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVD-G 675
Query: 146 GSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKI 205
+ + Y L++ + A+ L A+ E + TY LI L ++
Sbjct: 676 CEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVY-TYSSLI---DRLFKDKRL 731
Query: 206 DQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK-----QSATSDFDISAC 260
D + K L + + N I I + M+ L +V + + +K + ++
Sbjct: 732 DLVLKVLSKMLENSCAPN-IVIYTE--MIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTY 788
Query: 261 NRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
++ F G +K E + K CAP
Sbjct: 789 TAMIDGFGKAGKVDKCLELFREMGSKGCAP 818
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 42/208 (20%), Positives = 90/208 (43%), Gaps = 8/208 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY AL+ A + A +L E + N ++Y+ ++ + ++++ V ++
Sbjct: 647 TYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKM 706
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
P+++TY+ I +D V K L +M ++ + + V Y +++ +
Sbjct: 707 VEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKM-LENSCAPNIVIYTEMIDGLSKVAK 765
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
A L+ EK + +TY +I G G K+D+ + R K + N++
Sbjct: 766 TDEAYKLMLMMEEKG-CKPNVVTYTAMI---DGFGKAGKVDKCLELFREMGSKGCAPNFV 821
Query: 226 ---CILSSYLMLGHLKEVGEIIDQWKQS 250
+++ GHL E ++++ KQ+
Sbjct: 822 TYTVLINHCCATGHLDEAYALLEEMKQT 849
>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
Length = 814
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/283 (19%), Positives = 109/283 (38%), Gaps = 12/283 (4%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVK 71
Y T ID + K + + + A T TY L++ A E+AEELF +
Sbjct: 263 YNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMA 322
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
S N+++Y ++ + G++++ + +E+ PD+ T+ + I + N +
Sbjct: 323 ASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFE 382
Query: 132 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQW----I 187
Q K +EM G + V Y ++ + NA K + +
Sbjct: 383 QAAKSFEEMM-RGGCKPNVVTYTTIIQGLSKIGRVANA-----FRIMKGMIAHGCFPDSV 436
Query: 188 TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQW 247
TY L+ + LG D+ Q+ L + Y ++ G ++ + + +
Sbjct: 437 TYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQ 496
Query: 248 KQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
++A + D C ++ G ++A ++ + C P
Sbjct: 497 SKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKP 539
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/247 (20%), Positives = 103/247 (41%), Gaps = 47/247 (19%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
+TA++ AK ++A E+F ++++ +A+ YN M+ G ++ V++ +
Sbjct: 228 HTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNML 287
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
K VP TY + ++S +++ ++ M+ SG + V Y +L++ + + +
Sbjct: 288 AKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAA-SGFRPNSVIYTSLIHGFAKSGRM 346
Query: 167 VNA---------------------------ESSTLVEAEKSI-------TQRQWITYDFL 192
A +S +A KS + +TY +
Sbjct: 347 KEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTI 406
Query: 193 IILYAGLGNKDKIDQIWKSLRMTKQKMT------SRNYICILSSYLMLGHLKEVGEIIDQ 246
I GL KI ++ + R+ K + S YIC+L + LG L E +++D+
Sbjct: 407 I---QGL---SKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDE 460
Query: 247 WKQSATS 253
+ ++S
Sbjct: 461 LDKCSSS 467
>gi|168054024|ref|XP_001779433.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669118|gb|EDQ55711.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 570
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 97/245 (39%), Gaps = 4/245 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY+ ++ +Y ++A L+ERVKQ+ + + Y M+ L+ G + + EE+
Sbjct: 115 TYSTMIDVYGKMGKYDEAIALYERVKQAGWKPDKVTYGTMVRLFGRAGYIRAAVSIFEEM 174
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K V PD YN+ I+ + K +EM G + V ++ Y +
Sbjct: 175 KGSGVQPDAIVYNIMIACLGRAGRMGHALKVFEEME-REGVKPNAVTLSTVMETYSRCGN 233
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
++ E + + + I Y+ ++ + G + +Q + + + + Y
Sbjct: 234 VM--EGLEVFQRLRQGVACDVIVYNAVLKMCREAGLASEAEQYLREMTESGHQPNDWTYR 291
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 285
++S Y G E Q + A D+ A LL A+ + K E +
Sbjct: 292 NMISVYAKKGMAVEAHRTFSQMVE-AGYQIDVMAYTSLLQAYGNAKEYNKVQEILDEMTS 350
Query: 286 KNCAP 290
NCAP
Sbjct: 351 VNCAP 355
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 44/248 (17%), Positives = 100/248 (40%), Gaps = 6/248 (2%)
Query: 46 TYTALLH-LYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
TY +L L G +W E ++++ E + +++ + + Y+ +++ + +
Sbjct: 45 TYNVMLKVLRRGRQW-EFSQQIAEDMANADVRPDNITYSTLISCANRCNYQDAAMAWFDR 103
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+ VPD+ TY+ I D+ + + +G D V Y +V ++ A
Sbjct: 104 MHEAGCVPDVVTYSTMIDVYGKMGKYDEAIALYERVK-QAGWKPDKVTYGTMVRLFGRAG 162
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
+ + A S E + S Q I Y+ +I G ++++ + K +
Sbjct: 163 Y-IRAAVSIFEEMKGSGVQPDAIVYNIMIACLGRAGRMGHALKVFEEMEREGVKPNAVTL 221
Query: 225 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 284
++ +Y G++ E E+ + +Q D + N +L + GL +A ++ +
Sbjct: 222 STVMETYSRCGNVMEGLEVFQRLRQGVACDVIVY--NAVLKMCREAGLASEAEQYLREMT 279
Query: 285 QKNCAPTN 292
+ P +
Sbjct: 280 ESGHQPND 287
>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 72/154 (46%), Gaps = 4/154 (2%)
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
EKA ++ + + + Y+E++ + +VE + +E+K VVPD++TY +
Sbjct: 471 EKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTIL 530
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL-VNAESSTLVEAEK 179
I + I Q +LDEM D G V Y L++ Y+ A + V E L+ A+
Sbjct: 531 IDCFSKAGIIKQAHNWLDEMVRD-GCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKG 589
Query: 180 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 213
ITY LI Y GN +K QI+ +R
Sbjct: 590 CFP--NVITYTALIDGYCKSGNIEKACQIYARMR 621
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 101/270 (37%), Gaps = 29/270 (10%)
Query: 42 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 101
T TYT L+H Y AK A ELFE + N + Y ++ Y G +EK +
Sbjct: 557 PTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQI 616
Query: 102 VEEIK--------------RKNVV--PDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSG 145
++ + NV P++ TY + + + L+ M D G
Sbjct: 617 YARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVD-G 675
Query: 146 GSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKI 205
+ + Y L++ + A+ L A+ E+ + TY LI L ++
Sbjct: 676 CEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVY-TYSSLI---DRLFKDKRL 731
Query: 206 DQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK-----QSATSDFDISAC 260
D + K L + + N I I + M+ L +V + + +K + ++
Sbjct: 732 DLVLKVLSKMLENSCAPN-IVIYTE--MIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTY 788
Query: 261 NRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
++ F G +K E + K CAP
Sbjct: 789 TAMIDGFGKAGKVDKCLELFREMGSKGCAP 818
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 42/208 (20%), Positives = 91/208 (43%), Gaps = 8/208 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY AL+ A + A +L E + N ++Y+ ++ + ++++ V ++
Sbjct: 647 TYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKM 706
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ P+++TY+ I +D V K L +M ++ + + V Y +++ +
Sbjct: 707 VERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKM-LENSCAPNIVIYTEMIDGLSKVAK 765
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
A L+ EK + +TY +I G G K+D+ + R K + N++
Sbjct: 766 TDEAYKLMLMMEEKG-CKPNVVTYTAMI---DGFGKAGKVDKCLELFREMGSKGCAPNFV 821
Query: 226 ---CILSSYLMLGHLKEVGEIIDQWKQS 250
+++ GHL E ++++ KQ+
Sbjct: 822 TYTVLINHCCATGHLDEAYALLEEMKQT 849
>gi|242094006|ref|XP_002437493.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
gi|241915716|gb|EER88860.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
Length = 1039
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 97/226 (42%), Gaps = 36/226 (15%)
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
+ A+ +F + S +A+ Y ++ Y +G++E+ ++ E++R V PD+ TYN++
Sbjct: 686 DHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVF 745
Query: 121 ISSCAATLNID----QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVE 176
I+ C +D +K+ +D SC+ W+ + + + + +H V+
Sbjct: 746 INGCGHMGYMDCAFSTLKRMIDA-SCEPNYWTYWLLLKHFLKMSLANAHYVDT------- 797
Query: 177 AEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL-RMTKQKM--TSRNYICILSSYLM 233
+G+ N K+D +W+ L RM K + T+ Y I++ +
Sbjct: 798 --------------------SGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIAGFCK 837
Query: 234 LGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 279
L+E ++D S + L+ D+ L EKA F
Sbjct: 838 ATRLEEACVLLDHMLGKDISPNE-EIYTMLIKCCCDIKLFEKAASF 882
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 52/275 (18%), Positives = 106/275 (38%), Gaps = 14/275 (5%)
Query: 24 VFGIHSGERYFEGLPLSAKTSE--------TYTALLHLYAGAKWTEKAEELFERVKQSNL 75
++G+ ++ + + L K E TYT L+ + A LFE ++Q+ L
Sbjct: 504 IYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGL 563
Query: 76 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKK 135
+ + YN + G+ E+ + +K VV TY + + N +
Sbjct: 564 TPDEQAYNVLTDALCKSGRAEE---AYSFLVKKGVVLTKVTYTSLVDGFSKAGNTEFAAA 620
Query: 136 FLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIIL 195
+++M + G D Y L+ L N S L + + + Y +I
Sbjct: 621 LIEKMV-NEGCKADSHTYSVLLQALCKQKKL-NEALSILDQMTLRGVKGNIVAYTIIISE 678
Query: 196 YAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDF 255
G D ++ + + K ++ Y +SSY +G ++E G +I + +++ +
Sbjct: 679 MIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAP- 737
Query: 256 DISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
D+ N + +G + A ++ +C P
Sbjct: 738 DVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEP 772
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 51/260 (19%), Positives = 100/260 (38%), Gaps = 14/260 (5%)
Query: 37 LPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 94
+PL + +YT L+ + +A L + Q S N Y ++ G+
Sbjct: 244 MPLMGCRRNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGR 303
Query: 95 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 154
+ ++++E+ R+ VVP ++TYN I + + M + DDW Y
Sbjct: 304 IHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPDDWT-YN 362
Query: 155 NLVNIYITASHLVNAESSTLVEAEKSITQRQW----ITYDFLIILYAGLGNKDKIDQIWK 210
+L++ L + E R + IT+ +I Y D ++
Sbjct: 363 SLIH------GLCGGKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKS 416
Query: 211 SLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDV 270
+ +K K+ + Y ++S + LKE + +++ + S ++ ++ A+ V
Sbjct: 417 IMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSP-NVVIYTSIIDAYCKV 475
Query: 271 GLTEKANEFHMLLLQKNCAP 290
G A E L + C P
Sbjct: 476 GKVGAALEVFKLTEHEGCRP 495
>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 1184
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 108/250 (43%), Gaps = 7/250 (2%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
S Y +++ L +AEE F + + + + ++Y ++ + G + +
Sbjct: 759 SYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFY 818
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
E+ +++ PD+ TY IS ++ + K EM C G D V + L+N Y A
Sbjct: 819 EMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFC-KGLEPDSVTFTELINGYCKA 877
Query: 164 SHLVNA--ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 221
H+ +A + +++A S +TY LI G+ D +++ + +
Sbjct: 878 GHMKDAFRVHNHMIQAGCSPNV---VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNI 934
Query: 222 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 281
Y I++ G+++E +++ ++ ++A + D L+ A+ G +KA E
Sbjct: 935 FTYNSIVNGLCKSGNIEEAVKLVGEF-EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILK 993
Query: 282 LLLQKNCAPT 291
+L K PT
Sbjct: 994 EMLGKGLQPT 1003
Score = 43.9 bits (102), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 42/234 (17%), Positives = 96/234 (41%), Gaps = 3/234 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+Y ++H ++A L ++ + + + Y+ ++ Y G+++KV ++E +
Sbjct: 691 SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 750
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
KRK + P+ + Y I + + ++ EM G D V Y L++ +
Sbjct: 751 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEM-IRQGILPDTVVYTTLIDGFCKRGD 809
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ A S E +TY +I + +G+ + +++ + + S +
Sbjct: 810 -IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFT 868
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 279
+++ Y GH+K+ + + Q+ S ++ L+ G + ANE
Sbjct: 869 ELINGYCKAGHMKDAFRVHNHMIQAGCSP-NVVTYTTLIDGLCKEGDLDSANEL 921
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 50/272 (18%), Positives = 104/272 (38%), Gaps = 11/272 (4%)
Query: 25 FGI-HSGERYFE-----GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFN 78
FG+ R FE GL LS + Y L L T A +F + + +N
Sbjct: 631 FGLLREARRVFEKMLNYGLVLSVDSCNVY--LTRLSKDCYKTATAIIVFREFPEVGVCWN 688
Query: 79 ALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLD 138
YN ++ +G++++ ++ ++ K PD+ +Y+ ++ +D+V K ++
Sbjct: 689 VASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIE 748
Query: 139 EMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAG 198
M + ++ Y +++ + L AE + E + + Y LI +
Sbjct: 749 VMKRKGLKPNSYI-YGSIIGLLCRICKLAEAEEA-FSEMIRQGILPDTVVYTTLIDGFCK 806
Query: 199 LGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDIS 258
G+ + + + Y I+S + +G + E G++ + D
Sbjct: 807 RGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEP-DSV 865
Query: 259 ACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
L+ + G + A H ++Q C+P
Sbjct: 866 TFTELINGYCKAGHMKDAFRVHNHMIQAGCSP 897
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 58/136 (42%), Gaps = 2/136 (1%)
Query: 34 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 93
FE L+A T TYT L+ Y + +KA+E+ + + L + +N +M + G
Sbjct: 960 FEAAGLNADTV-TYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHG 1018
Query: 94 QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKY 153
+E ++ + K + P+ T+N + N+ +M C G D Y
Sbjct: 1019 MLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDM-CSRGVGPDGKTY 1077
Query: 154 VNLVNIYITASHLVNA 169
NLV + A ++ A
Sbjct: 1078 ENLVKGHCKARNMKEA 1093
>gi|299471045|emb|CBN78905.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 755
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 56/113 (49%), Gaps = 1/113 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+YTA + Y E+A EL ++ L+ N + YN ++ G+ EK +++E+
Sbjct: 567 SYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSVIKACGRGGEWEKALDLLKEL 626
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 158
K V PD+ +YNL IS+C ++ L EM + G + D + Y + +
Sbjct: 627 KETAVAPDLMSYNLAISACGKRGRWEEALDLLREMPAE-GLTPDVISYTSAIR 678
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 2/104 (1%)
Query: 57 AKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFT 116
+W E EL ++ L+ N + YN + GQ EK ++ ++K + PD T
Sbjct: 474 GRWQE-GLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSIT 532
Query: 117 YNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
YN I++C+ + L EM G + D + Y ++ Y
Sbjct: 533 YNSAIAACSKRGRWKEAVALLREMP-GQGLTPDVISYTAAIDAY 575
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 1/110 (0%)
Query: 48 TALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKR 107
TA+ +W + E L E +Q +S N YN + S Q E ++ E+
Sbjct: 149 TAITTCGRQGQWEKALELLREIPEQEGVSPNVFCYNSAIEACGSGDQWEIAVSLLREMAD 208
Query: 108 KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 157
+ VVPD +YN I +C ++V L EM G + D + Y +++
Sbjct: 209 REVVPDEISYNSAIKACGRGGQWERVIGLLREMP-SVGLTPDAITYNSVI 257
Score = 40.4 bits (93), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 26/118 (22%), Positives = 50/118 (42%), Gaps = 16/118 (13%)
Query: 56 GAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIF 115
G +W E+ L + L+ +A+ YN ++T GQ ++ V+ E+ K + P+
Sbjct: 228 GGQW-ERVIGLLREMPSVGLTPDAITYNSVITGCGKEGQWKEALSVLTEMSAKGLTPETI 286
Query: 116 TYNLWISSCAATLNIDQVKKFLDEMSCDS---------------GGSDDWVKYVNLVN 158
+YN+ I +C + + + L +M GG W V+L++
Sbjct: 287 SYNMAIRACGRSGRWKEAVEVLRQMESQGVTPDVISYDAAIKACGGGGQWETSVDLLD 344
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 48 TALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKR 107
+A++ G +W EKA EL V L+ +A +N + G+ ++ +++E+
Sbjct: 360 SAIVACGKGGQW-EKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELLKEMPA 418
Query: 108 KNVVPDIFTYNLWISSCA 125
K + PD +YN I +C
Sbjct: 419 KRLKPDAISYNSAIEACG 436
>gi|357122825|ref|XP_003563115.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Brachypodium distachyon]
Length = 410
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/309 (19%), Positives = 123/309 (39%), Gaps = 48/309 (15%)
Query: 27 IHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNE 84
+ +R F+ +P T T+TAL+H Y EK LFE+++ + N YN
Sbjct: 54 VAEAQRVFDVMPRLGLTPNEVTFTALIHGYFIHGRREKGLALFEKMRIGGIEPNLYTYNI 113
Query: 85 MMTLYMSVGQVEKVALVVEEI-----------------------------------KRKN 109
++ + G+ E+ L+ EE+ +R+
Sbjct: 114 LVGEWCRTGEFERARLLFEEMPAKGITRNVVSYNTLIAGLCRYRKMKDATQLLELMRREG 173
Query: 110 VVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 169
+ P + T+NL + + F ++M +G V Y L+ + A ++ A
Sbjct: 174 IRPSVVTFNLLVDGYGKAGKMSNALHFSNQMRM-AGYQPSAVTYNALIAGFCRARDMIRA 232
Query: 170 ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILS 229
+ E+ + + +TY LI +A + DK +++ + ++ R Y ++
Sbjct: 233 NRAFSDMKERGLAPTK-VTYTILIDAFARENDMDKAFEMFAGMEKAGLEVDVRTYGVLVH 291
Query: 230 SYLMLGHLKEVGEII----DQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 285
+ M G++K+ ++ ++ Q +D+ L+ + G + KA + M + +
Sbjct: 292 ALCMEGNMKDARKLFQSIGEKGLQVGNVIYDM-----LIYGYGREGSSYKAMKLIMEMRK 346
Query: 286 KNCAPTNAS 294
K P +AS
Sbjct: 347 KGFVPNSAS 355
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/185 (18%), Positives = 84/185 (45%), Gaps = 4/185 (2%)
Query: 48 TALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKR 107
TAL+H Y + +A+ +F+ + + L+ N + + ++ Y G+ EK + E+++
Sbjct: 42 TALVHGYCRSGDVAEAQRVFDVMPRLGLTPNEVTFTALIHGYFIHGRREKGLALFEKMRI 101
Query: 108 KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLV 167
+ P+++TYN+ + T ++ + +EM G + + V Y L+ +
Sbjct: 102 GGIEPNLYTYNILVGEWCRTGEFERARLLFEEMPA-KGITRNVVSYNTLIAGLCRYRKMK 160
Query: 168 NAESSTLVE-AEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 226
+A + L+E + + +T++ L+ Y G +RM + ++ Y
Sbjct: 161 DA--TQLLELMRREGIRPSVVTFNLLVDGYGKAGKMSNALHFSNQMRMAGYQPSAVTYNA 218
Query: 227 ILSSY 231
+++ +
Sbjct: 219 LIAGF 223
>gi|297734659|emb|CBI16710.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 102/220 (46%), Gaps = 18/220 (8%)
Query: 42 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 101
T T+ +++ + +A +LF+ +K+ S NA+MYN +M Y+ + ++++ ++
Sbjct: 124 PTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANML 183
Query: 102 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 161
EE+++K + PD T+N+ +S + + L ++S D +L +I +
Sbjct: 184 YEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDR-----SLFDISV 238
Query: 162 T----ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 217
+ A L A + EK ++ I ++ +I Y+ G +DK + +K M
Sbjct: 239 SGLCWAGRLDEAMEFLMDMLEKGLSP-SIIAFNSVIAAYSQAGLEDKAFEAYK--LMVHF 295
Query: 218 KMTSRNYICILSSYLML----GHLKEVGEIIDQWKQSATS 253
+T C SS LM G L+E E+I Q + S
Sbjct: 296 GLTPSPSTC--SSLLMGLSINGRLQEATELIGQMIEKGLS 333
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 63/128 (49%), Gaps = 5/128 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
++A + + E+A +F + + L N YN ++ + G++ + AL +E++
Sbjct: 373 AFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNE-ALKLEKV 431
Query: 106 KR-KNVVPDIFTYNLWISS-CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
R + ++PDIFT N+ I C + F+D +G S D + Y L+N Y A
Sbjct: 432 MRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMH--QTGLSPDIITYNTLINGYCKA 489
Query: 164 SHLVNAES 171
+VNA++
Sbjct: 490 FDMVNADN 497
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 47/249 (18%), Positives = 100/249 (40%), Gaps = 3/249 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T++ ++ + E L + + + NA YN ++ G+ +
Sbjct: 58 TFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLM 117
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ P + T+N I++ N+ + +K D + + G S + + Y L+N Y+
Sbjct: 118 IERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLK-EMGFSPNAIMYNTLMNGYVKMRE 176
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
++ + E K IT++ L+ + G ++ D++ K + + +
Sbjct: 177 -IDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFD 235
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 285
+S G L E E + + S I A N ++ A+S GL +KA E + L++
Sbjct: 236 ISVSGLCWAGRLDEAMEFLMDMLEKGLSP-SIIAFNSVIAAYSQAGLEDKAFEAYKLMVH 294
Query: 286 KNCAPTNAS 294
P+ ++
Sbjct: 295 FGLTPSPST 303
>gi|388521091|gb|AFK48607.1| unknown [Medicago truncatula]
Length = 506
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 60/117 (51%), Gaps = 1/117 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY +L+ Y K KA+++F + Q ++ N YN M+ + + +V+K + E+
Sbjct: 350 TYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEM 409
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 162
K+++PD+ TYN I + I + ++EM D G + + Y +++N +T
Sbjct: 410 HHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMH-DRGQPPNIITYNSILNALLT 465
>gi|414588908|tpg|DAA39479.1| TPA: chloroplast RNA splicing4 [Zea mays]
Length = 1438
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 91/199 (45%), Gaps = 2/199 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY +LL+ +A +K E E++ ++ N + YN M+ +Y +G+++ + +E+
Sbjct: 365 TYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEM 424
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ PD TY + I S I + K L++M+ D+G + + L+ Y
Sbjct: 425 RAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMT-DAGLKPTLIAFSALICAYAKGGR 483
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+AE +T S + + Y ++ ++A G+ +K+ +++ + + Y
Sbjct: 484 RADAE-NTFDCMIASGVKPDRLAYLVMLDVFARSGDTEKMLCLYRKMMNDNYRPDDDMYQ 542
Query: 226 CILSSYLMLGHLKEVGEII 244
+L + +E+ E+I
Sbjct: 543 VLLVALAKEDKCEEIEEVI 561
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 93/208 (44%), Gaps = 4/208 (1%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK-VAL- 100
T + + A++ +YA + + A +L + + + + + +N ++ G + VAL
Sbjct: 220 TVQVFNAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVALD 279
Query: 101 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
++ E+++ + PD+ TYN IS+C+ + N++ ++M D W Y +V+++
Sbjct: 280 LLFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWT-YNAMVSVH 338
Query: 161 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 220
AE EK ITY+ L+ +A GN DK++ + L K
Sbjct: 339 GRCGKAEEAERLFRELVEKGFMP-DAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKN 397
Query: 221 SRNYICILSSYLMLGHLKEVGEIIDQWK 248
Y ++ Y +G L + D+ +
Sbjct: 398 EITYNTMIHMYGKMGRLDLAVGLYDEMR 425
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 76/190 (40%), Gaps = 2/190 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY A++ ++ E+AE LF + + +A+ YN ++ + G V+KV E++
Sbjct: 330 TYNAMVSVHGRCGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQL 389
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ + TYN I +D DEM G + D V Y +++ +
Sbjct: 390 VKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRA-MGCTPDAVTYTVMIDSLGKMNR 448
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ A L + + + I + LI YA G + + + + + K Y+
Sbjct: 449 IAEA-GKVLEDMTDAGLKPTLIAFSALICAYAKGGRRADAENTFDCMIASGVKPDRLAYL 507
Query: 226 CILSSYLMLG 235
+L + G
Sbjct: 508 VMLDVFARSG 517
Score = 44.7 bits (104), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 36/187 (19%), Positives = 86/187 (45%), Gaps = 2/187 (1%)
Query: 49 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 108
ALL++Y A ++ +++ + ++ L + YN ++ +Y + E+ ++ E+ ++
Sbjct: 925 ALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKR 984
Query: 109 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVN 168
+ P + +Y +++ A +Q + +EM S + + Y ++ IY A +
Sbjct: 985 GLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSI-YHMMMKIYRNAGNHSK 1043
Query: 169 AESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICIL 228
AE+ V E I + T L+ Y G + + + +L+ + ++++ Y +
Sbjct: 1044 AENLLAVMKEDGI-EPTIATMHILMTSYGTAGQPREAENVLNNLKSSSLEVSTLPYSTVF 1102
Query: 229 SSYLMLG 235
+YL G
Sbjct: 1103 DAYLKNG 1109
Score = 40.4 bits (93), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 79/166 (47%), Gaps = 2/166 (1%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
+ AL+H YA + EKA +F+ + ++ N MM + G+++++ +VVEE++
Sbjct: 783 WNALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYVVVEELQ 842
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
N T L + + A ++ +V K + M +G + Y +++++ +
Sbjct: 843 DMNFKISKSTVLLLLDAFAKAGDVFEVMKIYNGMKA-AGYLPNMHLYRSMISLLCHHNRF 901
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 212
+ E + E E + + + L+ +Y GN D+ Q+++S+
Sbjct: 902 RDVE-LMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSI 946
>gi|357121540|ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Brachypodium distachyon]
Length = 556
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/248 (20%), Positives = 106/248 (42%), Gaps = 3/248 (1%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
TY AL++ + E AE L ++ + N +++N M+ Y G VEK +
Sbjct: 289 RTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVEKALEIKAV 348
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+++ + DI+TYN ++ KK L M+ + G + ++V Y L++I+
Sbjct: 349 MEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMA-EKGVAPNYVSYTTLISIHAKEG 407
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
+V A + E ++ +TY+ +I Y G+ + ++ K + Y
Sbjct: 408 DMVEAR-RLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKGLVPDIYTY 466
Query: 225 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 284
++ + + G + + ++ K T ++ A L+ + G +E+A + + +L
Sbjct: 467 AGLVHGHCVNGKVDVALRLFEEMKHRGTKP-NVVAYTALVSGLAKEGRSEEAFQLYDDML 525
Query: 285 QKNCAPTN 292
P +
Sbjct: 526 AAGLTPDD 533
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/230 (19%), Positives = 94/230 (40%), Gaps = 3/230 (1%)
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
+ A L + + + + NA YN ++ Y + VA +++E++ + V P + TY +
Sbjct: 165 DDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKEMENRGVEPTVGTYTIL 224
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
+ + +I +V+ DEM + D + Y ++N Y ++ A S E
Sbjct: 225 VDGLSRAGDISKVEAVYDEMKRKNVAGDVYF-YSAVINAYCRGGNVRRA-SEVFDECVGH 282
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 240
+ TY LI + +G + + + +++ + ++ Y G +++
Sbjct: 283 GVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVEKA 342
Query: 241 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
EI ++ + DI N L V E A + ++ +K AP
Sbjct: 343 LEIKAVMEKMGI-ELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAP 391
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/196 (16%), Positives = 87/196 (44%), Gaps = 8/196 (4%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y+A+++ Y +A E+F+ + N Y ++ + +GQ+E +++ +++
Sbjct: 256 YSAVINAYCRGGNVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQ 315
Query: 107 RKNVVPDIFTYNLWISSCAATLNID---QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
+ V + +N I ++ ++K +++M + D Y L
Sbjct: 316 LRGVGHNQIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIEL----DIYTYNTLACGLCRV 371
Query: 164 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 223
+ + +A+ + AEK + +++Y LI ++A G+ + ++++ + + +
Sbjct: 372 NRMEDAKKLLHIMAEKGVAP-NYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVT 430
Query: 224 YICILSSYLMLGHLKE 239
Y ++ Y+ G ++E
Sbjct: 431 YNVMIDGYIKNGSIRE 446
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 52/124 (41%), Gaps = 1/124 (0%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y +LL Y + + L + ++ + Y ++ G + KV V +E+K
Sbjct: 186 YNSLLDSYTRQRNDDAVAGLLKEMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMK 245
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
RKNV D++ Y+ I++ N+ + + DE G + Y L+N + +
Sbjct: 246 RKNVAGDVYFYSAVINAYCRGGNVRRASEVFDE-CVGHGVEPNERTYGALINGFCKIGQI 304
Query: 167 VNAE 170
AE
Sbjct: 305 EAAE 308
>gi|302755512|ref|XP_002961180.1| hypothetical protein SELMODRAFT_21211 [Selaginella moellendorffii]
gi|300172119|gb|EFJ38719.1| hypothetical protein SELMODRAFT_21211 [Selaginella moellendorffii]
Length = 497
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 111/236 (47%), Gaps = 15/236 (6%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSN-LSFNALMYNEMMTLYMSVGQVEKVALVVE 103
E YT + K +A++L +++++ + L+ +++ +N ++ + + GQ+E+ VV+
Sbjct: 52 ECYTVAIAEVVAEKKMSEAQQLLKQMEEEDGLAPDSVCFNTVINGWCNEGQMEEAMRVVQ 111
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM---SCDSGGSDDWVKYVNLVNIY 160
E+++KN P TYN I +Q ++ + + + +S S+D ++ V N+
Sbjct: 112 EMRQKNCRPTTSTYNTLIKGYGVAGQAEQAQQLVLHLLNKTRNSPSSEDGLEPVARPNLR 171
Query: 161 ITASHLVNA--ESSTLVEAEKSIT-------QRQWITYDFLIILYAGLGNKDKIDQIWKS 211
T + L+NA L EA + + Q +TY+ L YA G +++ +
Sbjct: 172 -TMNTLLNAWCREGRLEEAWRVVAMIKSAGMQPDAVTYNTLAKAYAAAGRVAELEDLIAD 230
Query: 212 LRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAF 267
++ + K R Y ++S Y G + +++ + K D+ A N LL +
Sbjct: 231 MKNARLKPNLRTYAILISCYCQNGMPERGLQLLSRLKFEGLHP-DVVAFNTLLKGY 285
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 48/286 (16%), Positives = 110/286 (38%), Gaps = 17/286 (5%)
Query: 18 IDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSF 77
+ L+ K S E E P++ T LL+ + E+A + +K + +
Sbjct: 146 LHLLNKTRNSPSSEDGLE--PVARPNLRTMNTLLNAWCREGRLEEAWRVVAMIKSAGMQP 203
Query: 78 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFL 137
+A+ YN + Y + G+V ++ ++ ++K + P++ TY + IS ++ + L
Sbjct: 204 DAVTYNTLAKAYAAAGRVAELEDLIADMKNARLKPNLRTYAILISCYCQNGMPERGLQLL 263
Query: 138 DEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI-------------TQR 184
+ + G D V + L+ Y+ + E ++ + +
Sbjct: 264 SRLKFE-GLHPDVVAFNTLLKGYVEQQSSQQQQDFQSQENDQQLKLEMVLDLMAANGVRP 322
Query: 185 QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEII 244
TY ++ ++ G DK I ++ + K R + + Y+ G E ++
Sbjct: 323 DVTTYSTIMNWWSSAGVADKAQTILLEMQQDRVKPDVRAFAILAKGYVRSGRTHEAESLL 382
Query: 245 DQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
+ ++ ++ + +G + A L+L++ AP
Sbjct: 383 QDMSLHGVAP-NVVVYTTIISGWCSMGRMDDALRVLELMLERGEAP 427
>gi|224118166|ref|XP_002317747.1| predicted protein [Populus trichocarpa]
gi|222858420|gb|EEE95967.1| predicted protein [Populus trichocarpa]
Length = 498
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/257 (20%), Positives = 111/257 (43%), Gaps = 17/257 (6%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQS-NLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
+ + +++ Y A A + F R+K+ ++ + + N ++ +++ + V ++
Sbjct: 87 DVFISVIRNYGLAGRPRLALKTFTRIKEEFSMQPSVKLLNTLLNVFVQNKRYHLVGSTLK 146
Query: 104 EIKRK-NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 162
K K V+P++F++N+ I + +++ K DEM G + V Y ++ +++
Sbjct: 147 NCKDKYGVLPNVFSFNILIKALCKKNDVENALKVFDEMP-TMGMIPNLVTYTTILGGFVS 205
Query: 163 ASHLVNAESSTLVEAEKSITQRQWI----TYDFLIILYAGLGNKDKIDQIWKSLRMTKQK 218
LVNAE + I+ + W+ TY L++ Y G ++ ++ +
Sbjct: 206 RGDLVNAE-----KVFSEISDKGWLPDATTYTVLMVGYCKQGRLSDAIKVMDNMEYNGVE 260
Query: 219 MTSRNYICILSSYLMLGHLKEVGEIIDQW--KQSATSDFDISACNRLLGAFSDVGLTEKA 276
Y ++ +Y E +ID K+ S + C +++ + G E A
Sbjct: 261 PNEVTYGVMIDAYCKEKKSGEARNLIDDMLDKKFLPSS---TLCCKVIDVLCEDGKVENA 317
Query: 277 NEFHMLLLQKNCAPTNA 293
+L+KNC P NA
Sbjct: 318 CHLWKRMLEKNCLPDNA 334
>gi|222636666|gb|EEE66798.1| hypothetical protein OsJ_23544 [Oryza sativa Japonica Group]
Length = 665
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 106/254 (41%), Gaps = 15/254 (5%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
++ Y ++ LYA ++A LF +++ +A +YN ++ + GQ ++E
Sbjct: 11 NDIYGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIME 70
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
++ R + P TYN I++C A N + + +M+ + G D LV I
Sbjct: 71 DMLRAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPD-------LVTHNIVL 123
Query: 164 SHLVNAESSTLVEAEKSITQRQWITYD-----FLIILYAGLGNKDKIDQIWKSLRMTKQK 218
S L N + + I + +T D +I +G + +++ S+R + K
Sbjct: 124 SALKNGAQYSKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTK 183
Query: 219 MTSR--NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
Y I+ SY + G ++ I D +I A N LLGA++ G+ +A
Sbjct: 184 CPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKP-NIVAYNSLLGAYASRGMHREA 242
Query: 277 NEFHMLLLQKNCAP 290
L+ + P
Sbjct: 243 LAIFNLIKKNGLRP 256
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 55/93 (59%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+YT+LL+ Y + EKA E+F ++K+++ N + YN ++ Y S G +++ ++ E+
Sbjct: 260 SYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEM 319
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLD 138
++ + PD+ + + +++C I +++ L+
Sbjct: 320 EKDGIQPDVVSISTLLAACGRCRQITRIETILE 352
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 97/226 (42%), Gaps = 3/226 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT+++H Y E + +F+ + + N + YN ++ Y S G + + I
Sbjct: 190 TYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLI 249
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K+ + PDI +Y +++ + ++ ++ ++M +S + V Y L++ Y +A
Sbjct: 250 KKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNK-VSYNALIDAYGSAGM 308
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
L A L E EK Q ++ L+ +I+ I ++ R + + Y
Sbjct: 309 LKEA-VGLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYN 367
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 271
+ SYL G ++ E+ ++S D N L+ S +G
Sbjct: 368 SGIKSYLSFGDYEKALELYTSMRESNVKP-DAVTYNILISGSSKLG 412
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 46 TYTALLHLY-AGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
TYT L+ Y AG W ++A +LF+ ++ + + +A++ + +M + G+ E+V ++E
Sbjct: 458 TYTTLIQAYNAGGGW-KRAWDLFKEMEVNGIPPDAIICSSLMEAFNKGGEPERVLQLMEF 516
Query: 105 IKRKNVVPDIFTYNLWISSC 124
+K+K++ + +Y I+SC
Sbjct: 517 MKKKSIPLNQKSYFEIIASC 536
>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 85/172 (49%), Gaps = 12/172 (6%)
Query: 46 TYTALLH-LYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
TYTAL++ L +W + A L + +K+ ++ N + Y+ ++ ++ G+V + + EE
Sbjct: 227 TYTALVNGLCNSGRWNDAARLLRDMIKRK-ITPNVITYSALLDAFVKNGKVLEAKEIFEE 285
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+ R ++ PDI TY+ I+ ID+ + D M G D V Y L+N + A
Sbjct: 286 MVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV-SKGCFPDVVSYNTLINGFCKAK 344
Query: 165 HLVNAESSTLVEAEKSITQR----QWITYDFLIILYAGLGNKDKIDQIWKSL 212
+ + ++ + ++QR +TY+ LI + +G+ DK + + +
Sbjct: 345 RVEDG-----MKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQM 391
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+Y L++ + AK E +LF ++ Q L N + YN ++ + VG V+K ++
Sbjct: 332 SYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQM 391
Query: 106 KRKNVVPDIFTYNLWISS 123
V PDI+TYN+ +
Sbjct: 392 DSFGVSPDIWTYNILLGG 409
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 94/236 (39%), Gaps = 15/236 (6%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y A++ + A + F+ + + + N + Y ++ + G+ A ++ ++
Sbjct: 193 YNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMI 252
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE---MSCDSGGSDDWVKYVNLVNIYITA 163
++ + P++ TY+ + + + + K+ +E MS D D V Y +L+N
Sbjct: 253 KRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDP----DIVTYSSLINGLCLH 308
Query: 164 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 223
+ A + K ++Y+ LI G +++ K R Q+ N
Sbjct: 309 DRIDEANQMFDLMVSKGCFP-DVVSYNTLI---NGFCKAKRVEDGMKLFRKMSQRGLVNN 364
Query: 224 ---YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
Y ++ + +G + + E Q S DI N LLG D GL EKA
Sbjct: 365 TVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSP-DIWTYNILLGGLCDNGLLEKA 419
>gi|242091740|ref|XP_002436360.1| hypothetical protein SORBIDRAFT_10g001070 [Sorghum bicolor]
gi|241914583|gb|EER87727.1| hypothetical protein SORBIDRAFT_10g001070 [Sorghum bicolor]
Length = 999
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 116/264 (43%), Gaps = 52/264 (19%)
Query: 21 MTKVFGIHSGERYFEGLPLSAKTSE---TYTALLHLYAGAKWTEKAEELFERVKQSNLSF 77
+TK +HS ++ + +S+ TS+ T+ ++ ++ +KA E+F ++ L
Sbjct: 722 LTKHGKLHSAISIYDRM-ISSGTSQSMQTFNLMISVFGKGGKLDKAVEMFAAAQELGLPI 780
Query: 78 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFL 137
+ MY M++LY G+ ++ +L+ + +K + P ++N I++ A + + K
Sbjct: 781 DEKMYTNMLSLYGKAGRHQEASLMFKRMKEDGIRPGKISFNSMINAYATSGLCSEAKSTF 840
Query: 138 DEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYA 197
EM D G + D Y+ L+ Y E+ +EAE++I
Sbjct: 841 HEMQ-DCGHAPDSFSYLALIRAY--------TEAKLYMEAEEAI---------------- 875
Query: 198 GLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE--VGE---IIDQWKQSAT 252
RM T+ + C S+L+ LKE +GE I +Q K+++
Sbjct: 876 ---------------RMMLNSSTTPS--CPHFSHLIFAFLKEGQIGEAQRIYNQMKEASV 918
Query: 253 SDFDISACNRLLGAFSDVGLTEKA 276
+ D++ C ++ + + GL ++
Sbjct: 919 AP-DLACCRTMMRVYMEHGLMDEG 941
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 99/239 (41%), Gaps = 18/239 (7%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT ++ + EKA ++F ++Q Y+ +++ G+ E+ + EE+
Sbjct: 281 TYTVVISSFVKEDLLEKAMDVFGEMRQCRFVPEEATYSLLISASSRHGKGEQALRLFEEM 340
Query: 106 KRKNVVPDIFTYNLWISSCAATL-----NIDQVK--KFLDEMSCDSGGSDDWVKYVNLVN 158
K + +VP +T CA+ L N D K L EM +S D V Y L+
Sbjct: 341 KAQGIVPSNYT-------CASLLALYYKNEDYSKALSLLSEME-NSKVIPDEVIYGILIR 392
Query: 159 IYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQK 218
IY AE T + EK+ TY + ++ G+ D+ ++ +S+ M K
Sbjct: 393 IYGKLGLYEEAE-QTFEKIEKAGLLSDEQTYVAMAQVHLNAGDYDRALEVLESMMMRNVK 451
Query: 219 MTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 277
+ +Y IL Y+ + + Q D+ CN LL + +G EKA
Sbjct: 452 PSHFSYSAILRCYVAKEDIVAAEDTFRALSQHGLP--DVFCCNDLLRLYMRLGHLEKAR 508
Score = 44.7 bits (104), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 60/128 (46%), Gaps = 2/128 (1%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y L+ +Y E+AE+ FE+++++ L + Y M ++++ G ++ V+E +
Sbjct: 387 YGILIRIYGKLGLYEEAEQTFEKIEKAGLLSDEQTYVAMAQVHLNAGDYDRALEVLESMM 446
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
+NV P F+Y+ + A +I + +S G D +L+ +Y+ HL
Sbjct: 447 MRNVKPSHFSYSAILRCYVAKEDIVAAEDTFRALS--QHGLPDVFCCNDLLRLYMRLGHL 504
Query: 167 VNAESSTL 174
A + L
Sbjct: 505 EKARALVL 512
Score = 43.9 bits (102), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 76/181 (41%), Gaps = 4/181 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
YT LL LY + AEE F + Q +A+ ++ +Y G+ + + L +
Sbjct: 176 AYTILLRLYGKVGKIKLAEETFLEMLQVGCEPDAVACGTLLCMYARWGRHKDMMLFYSAV 235
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+R+++VP + YN ISS +V +M ++G + Y +++ ++
Sbjct: 236 RRRDLVPPVSVYNYMISSLQKQKLHGKVIHVWKQMR-EAGALPNQFTYTVVISSFVKED- 293
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
L+ E + + TY LI + G ++ ++++ M Q + NY
Sbjct: 294 LLEKAMDVFGEMRQCRFVPEEATYSLLISASSRHGKGEQALRLFEE--MKAQGIVPSNYT 351
Query: 226 C 226
C
Sbjct: 352 C 352
>gi|449507908|ref|XP_004163164.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Cucumis sativus]
Length = 685
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 82/175 (46%), Gaps = 8/175 (4%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
+ Y ++L T +A EL +V + +S + +MYN +++ + QV + + E+
Sbjct: 442 DAYISMLESLCRGGKTVEAIELLSKVHEKGISTDTMMYNTVLSTLGKLKQVSHLHDLYEK 501
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+K+ PDIFTYN+ ISS + + + +E+ S D + Y +L+N
Sbjct: 502 MKQDGPFPDIFTYNILISSLGRVGKVKEAVEVFEELE-SSDCKPDIISYNSLINCLGKNG 560
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL--RMTKQ 217
+ A L +K + +TY LI + G DK+ ++ +SL RM Q
Sbjct: 561 DVDEAHMRFLEMQDKGLNP-DVVTYSTLIECF---GKTDKV-EMARSLFDRMITQ 610
Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 70/162 (43%), Gaps = 6/162 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L+ ++A E+FE ++ S+ + + YN ++ G V++ + E+
Sbjct: 513 TYNILISSLGRVGKVKEAVEVFEELESSDCKPDIISYNSLINCLGKNGDVDEAHMRFLEM 572
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ K + PD+ TY+ I T ++ + D M G + V Y L++ A
Sbjct: 573 QDKGLNPDVVTYSTLIECFGKTDKVEMARSLFDRM-ITQGCCPNIVTYNILLDCLERAGR 631
Query: 166 LVNAESSTLVEA--EKSITQRQWITYDFLIILYAGLGNKDKI 205
AE+ L E+ +T ITY L L +G K ++
Sbjct: 632 --TAETVDLYAKLREQGLTP-DSITYAILDRLQSGSNRKFRV 670
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 45/93 (48%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT ++ + E++ LFE + + N + YN M+ G V+K L+ +
Sbjct: 306 TYTIMIRMTGKMGRAEESLALFEEMLTKGCTPNLIAYNTMIQALSKSGMVDKAILLFCNM 365
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLD 138
+ N P+ FTY++ ++ A + ++ + L+
Sbjct: 366 IKNNCRPNEFTYSIILNVLVAEGQLGRLDEVLE 398
>gi|359490053|ref|XP_003634022.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
chloroplastic-like [Vitis vinifera]
gi|297745081|emb|CBI38673.3| unnamed protein product [Vitis vinifera]
Length = 900
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 61/125 (48%), Gaps = 4/125 (3%)
Query: 34 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 93
F G +S E Y +L Y E + R+K+S+ + + YN M+ +Y G
Sbjct: 757 FNGFSVSL---EVYNCMLDSYGKEGQIESFRSVLRRMKESSCASDHYTYNIMINIYGEQG 813
Query: 94 QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKY 153
+E+VA V+ E+K + PD+ +YN I + ++ + EM ++G D + Y
Sbjct: 814 WIEEVANVLTELKESGLGPDLCSYNTLIKAYGIAGMVEDAVVLVKEMR-ENGIQPDRITY 872
Query: 154 VNLVN 158
+NL+N
Sbjct: 873 INLIN 877
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/322 (16%), Positives = 130/322 (40%), Gaps = 40/322 (12%)
Query: 5 KEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAE 64
K+ + D+ Y I ++ + + + + +P ++ +Y+ AE
Sbjct: 515 KDTIFEDNLYHLVICSCKELGRLENAVKIYSQMPNKKPNLHIMCTMIDIYSTLGRFSDAE 574
Query: 65 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI-KRKNVVPDIF-------- 115
L+ ++K S +S + + ++ ++ +Y+ G ++ V+E + ++KN+VPDI+
Sbjct: 575 NLYLKLKSSEISLDMIAFSIVVRMYVKSGSLKDACSVLETMDEQKNIVPDIYLFCDMLRI 634
Query: 116 ---------------------------TYNLWISSCAATLNIDQVKKFLDEMSCDSGGSD 148
YN I+ CA L +D++ + DEM G +
Sbjct: 635 YQQCGMLDKLQDLYYRILKTGVTWDSEMYNCVINCCARALPVDELSRLFDEMLL-HGFAP 693
Query: 149 DWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQI 208
+ + ++++Y + A + ++ + I+Y+ +I Y + K+
Sbjct: 694 NTITLNVMLDVYGKSRLFKKARKVLWLARKRGLVDV--ISYNTIIAAYGQSKDLKKMLST 751
Query: 209 WKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFS 268
+ ++ ++ Y C+L SY G ++ ++ + K+S+ + D N ++ +
Sbjct: 752 VRQMQFNGFSVSLEVYNCMLDSYGKEGQIESFRSVLRRMKESSCAS-DHYTYNIMINIYG 810
Query: 269 DVGLTEKANEFHMLLLQKNCAP 290
+ G E+ L + P
Sbjct: 811 EQGWIEEVANVLTELKESGLGP 832
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 66/148 (44%), Gaps = 2/148 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+Y ++ Y +K +K +++ + S + +YN M+ Y GQ+E V+ +
Sbjct: 731 SYNTIIAAYGQSKDLKKMLSTVRQMQFNGFSVSLEVYNCMLDSYGKEGQIESFRSVLRRM 790
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K + D +TYN+ I+ I++V L E+ +SG D Y L+ Y A
Sbjct: 791 KESSCASDHYTYNIMINIYGEQGWIEEVANVLTELK-ESGLGPDLCSYNTLIKAYGIAG- 848
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLI 193
+V + E ++ Q ITY LI
Sbjct: 849 MVEDAVVLVKEMRENGIQPDRITYINLI 876
>gi|255554390|ref|XP_002518234.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542581|gb|EEF44120.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 932
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 109/245 (44%), Gaps = 15/245 (6%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYTA++ + ++A +F+ V+ + + +Y ++ + G ++ ++EE+
Sbjct: 327 TYTAIILGFCRKGKIDEAFAIFKLVENLGIKLDEFIYAILVDGFCLKGDFDRAYQLIEEM 386
Query: 106 KRKNVVPDIFTYNLWISS-CAA--TLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 162
++K + P I YN+ I+S C A T + D+V K L D + Y L++ YI
Sbjct: 387 EKKGITPTIVAYNILINSLCKAGRTFDADEVSKAL---------QGDKITYSALLHGYIK 437
Query: 163 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 222
+ + E++ Q I ++ ++ +G + + ++ ++ S
Sbjct: 438 EENSIGI-LEVRQRLEEARIQMDIIMFNIILKALFVVGAFEDVLVLYNGMQEMNLVANSI 496
Query: 223 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 282
Y I+ + +G + E EI D+++ S ++ N ++ G+ + A E +
Sbjct: 497 TYCTIIGGFCKVGRIDEALEIFDEFRHGLGS--SVACYNCMINGLCKNGMVDMAAEIFVE 554
Query: 283 LLQKN 287
L++K
Sbjct: 555 LIEKG 559
Score = 37.0 bits (84), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 45/232 (19%), Positives = 98/232 (42%), Gaps = 8/232 (3%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
YT L+ ++ EK+ + + N + Y ++ + G++++ + + ++
Sbjct: 293 YTILIDGFSKEGSVEKSVGFLHHMLANGSEPNLVTYTAIILGFCRKGKIDEAFAIFKLVE 352
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
+ D F Y + + + D+ + ++EM G + V Y L+N A
Sbjct: 353 NLGIKLDEFIYAILVDGFCLKGDFDRAYQLIEEME-KKGITPTIVAYNILINSLCKAGRT 411
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 226
+A+ E K++ Q ITY L+ Y N I ++ + L + +M +
Sbjct: 412 FDAD-----EVSKAL-QGDKITYSALLHGYIKEENSIGILEVRQRLEEARIQMDIIMFNI 465
Query: 227 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 278
IL + ++G ++V + + ++ I+ C ++G F VG ++A E
Sbjct: 466 ILKALFVVGAFEDVLVLYNGMQEMNLVANSITYCT-IIGGFCKVGRIDEALE 516
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 62/125 (49%), Gaps = 1/125 (0%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
+TY+ L+H + +A +F +++ L NA YN +++ G V+K + ++EE
Sbjct: 601 QTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEE 660
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+ K + PDI TYN+ I I++ K D++ G + + V Y +V+ Y +
Sbjct: 661 MCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIE-GRGLTPNCVTYAAMVDGYCKSK 719
Query: 165 HLVNA 169
+ A
Sbjct: 720 NPTAA 724
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 89/205 (43%), Gaps = 11/205 (5%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L+ A E+A+ LF+ ++ L+ N + Y M+ Y ++EE+
Sbjct: 672 TYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEM 731
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ V PD F YN+ ++ C ++ EM G V + L+ Y +
Sbjct: 732 LLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEML--EKGFASTVSFNTLIEGYCKSGK 789
Query: 166 LVNAESSTLVEAEKSITQRQWI----TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 221
L E++ L+E + ++Q+I TY LI G + ++W ++ T+
Sbjct: 790 L--QEANHLLE---EMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTA 844
Query: 222 RNYICILSSYLMLGHLKEVGEIIDQ 246
+ Y +L Y +G++ EV + ++
Sbjct: 845 KTYTSLLHGYHNIGNMSEVSALFEE 869
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 54/101 (53%), Gaps = 2/101 (1%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
A T TY+ +++ + + + + L NA++Y +MT + G+VE+ +
Sbjct: 422 APTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRM 481
Query: 101 VVEEIKRKNVVPDIFTYN-LWISSCAATLNIDQVKKFLDEM 140
++E ++ + ++PD+F YN L I C A +++ + +L EM
Sbjct: 482 ILERMREQGILPDVFCYNSLIIGFCKAK-RMEEARTYLMEM 521
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 47/245 (19%), Positives = 95/245 (38%), Gaps = 38/245 (15%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY AL+ + E+A + + + + N +++N ++ G++EK +++E+
Sbjct: 322 TYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEM 381
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K V PD TY+L I N+ + + LDEM
Sbjct: 382 MEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEM------------------------- 416
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+K +TY +I GN + I + + M K + Y
Sbjct: 417 ------------KKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYT 464
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 285
+++++ G ++E I+++ ++ D+ N L+ F E+A + M +L+
Sbjct: 465 TLMTAHAKEGRVEESRMILERMREQGILP-DVFCYNSLIIGFCKAKRMEEARTYLMEMLE 523
Query: 286 KNCAP 290
+ P
Sbjct: 524 RRLRP 528
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 72/161 (44%), Gaps = 5/161 (3%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSET---YTALLHLYAGAKWTEKAEELFERV 70
Y ID +K + +RYF + LS YTAL+ + +A +F +
Sbjct: 533 YGAFIDGYSKAGEMEIADRYFNEM-LSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFI 591
Query: 71 KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 130
+ + Y+ ++ G++ + + E++ K ++P+ FTYN IS N+
Sbjct: 592 LSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNV 651
Query: 131 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES 171
D+ + L+EM C G + D V Y L++ A + A++
Sbjct: 652 DKASQLLEEM-CIKGINPDIVTYNILIDGLCKAGEIERAKN 691
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 49/95 (51%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT+L+ A +A+ L+ +++ N+ A Y ++ Y ++G + +V+ + EE+
Sbjct: 811 TYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEM 870
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
K + PD TY + I + N+ + K DE+
Sbjct: 871 VAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEI 905
Score = 37.4 bits (85), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 99/255 (38%), Gaps = 11/255 (4%)
Query: 40 SAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVA 99
+ S + L+ Y + +A +F K + L N ++ + +VE
Sbjct: 141 GSPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFW 200
Query: 100 LVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 159
V + + V+PD++TY IS+ N+ K+ L EM + G S + V Y ++
Sbjct: 201 KVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMG-EKGCSPNLVTYNVIIGG 259
Query: 160 YITASHLVNAESSTLVEAEKSITQRQWI----TYDFLIILYAGLGNKDKIDQIWKSLRMT 215
A L A +E ++S+ + + TYD LI + + + +
Sbjct: 260 LCRARLLDEA-----IELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDV 314
Query: 216 KQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEK 275
K Y ++ ++ G +++ I D+ + ++ N LL G EK
Sbjct: 315 GLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGI-EANLIIWNTLLNGVCKAGKMEK 373
Query: 276 ANEFHMLLLQKNCAP 290
A E +++K P
Sbjct: 374 ALEIMQEMMEKGVEP 388
Score = 37.0 bits (84), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 62/144 (43%), Gaps = 6/144 (4%)
Query: 2 VTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAK----TSETYTALLHLYAGA 57
+ K+F+ + Y + ID K + +R + L + + T++TYT+LLH Y
Sbjct: 800 MIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLW--LEMQERNVMPTAKTYTSLLHGYHNI 857
Query: 58 KWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTY 117
+ LFE + + + + Y M+ Y G V + + +EI K + + Y
Sbjct: 858 GNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAY 917
Query: 118 NLWISSCAATLNIDQVKKFLDEMS 141
+ I + +V K L+E+
Sbjct: 918 DALIQALCKKEEFFEVLKLLNEIG 941
>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 98/246 (39%), Gaps = 3/246 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY+ +LH + +A LF + N+ N + + ++ G V + V E +
Sbjct: 269 TYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAM 328
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+K P+ +TYN + +D+ +K LD M D G + Y L+N Y
Sbjct: 329 TKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIM-VDKGCAPVVHSYNILINGYCKRRR 387
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
L A+S + +EK +T +TY L+ +G + ++K + + Y
Sbjct: 388 LDEAKSLLVEMSEKELTP-DTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYS 446
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 285
+L GHL E +++ ++S DI N L+ G E A E L
Sbjct: 447 TLLDGLCKHGHLDEALKLLKSMQESKIEP-DIVLYNILIEGMFIAGKLEVAKELFSKLFA 505
Query: 286 KNCAPT 291
PT
Sbjct: 506 DGIQPT 511
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 57/126 (45%), Gaps = 1/126 (0%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
A +Y L++ Y + ++A+ L + + L+ + + Y+ +M VG+ ++
Sbjct: 369 APVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALN 428
Query: 101 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
+ +E+ ++PD+ TY+ + ++D+ K L M +S D V Y L+
Sbjct: 429 LFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQ-ESKIEPDIVLYNILIEGM 487
Query: 161 ITASHL 166
A L
Sbjct: 488 FIAGKL 493
>gi|413944457|gb|AFW77106.1| hypothetical protein ZEAMMB73_510937 [Zea mays]
Length = 492
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 107/247 (43%), Gaps = 8/247 (3%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y L+ + K EKA +LF+ + + N Y +++ Y G+ + +++ +K
Sbjct: 144 YIKLITMLGKCKQPEKAHQLFQAMIDEGCAPNLQSYTALVSTYSRSGRFREAFDLLDRMK 203
Query: 107 -RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
PD+ TY++ I SC + ++VK L +M+ +G + V Y L++ Y A
Sbjct: 204 DTPGCQPDVQTYSILIKSCLHAYDFEKVKSLLADMA-RAGIPPNTVTYNTLIDAYGKAGR 262
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
ES+ L ++ W T + + + G + ++ ++ + + + Y
Sbjct: 263 FAEMESTLLKMLSQNCKPDVW-TMNSTLRAFGSSGQIETMESCYEKFQASGIVPNIKTYN 321
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL-- 283
+L SY +++G ++ ++ Q + I N ++ AF G E+ L+
Sbjct: 322 ILLDSYGKAKMYEKMGAVM-EYMQKYYYSWTIVTYNVVIDAFGRAGDLEQMEYIFRLMKS 380
Query: 284 --LQKNC 288
++ NC
Sbjct: 381 ERIKPNC 387
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 51/255 (20%), Positives = 109/255 (42%), Gaps = 7/255 (2%)
Query: 38 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 97
P +TY+ L+ A EK + L + ++ + N + YN ++ Y G+ +
Sbjct: 206 PGCQPDVQTYSILIKSCLHAYDFEKVKSLLADMARAGIPPNTVTYNTLIDAYGKAGRFAE 265
Query: 98 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 157
+ + ++ +N PD++T N + + ++ I+ ++ ++ SG + Y L+
Sbjct: 266 MESTLLKMLSQNCKPDVWTMNSTLRAFGSSGQIETMESCYEKFQA-SGIVPNIKTYNILL 324
Query: 158 NIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 217
+ Y A + + + +K +TY+ +I + G+ ++++ I+ R+ K
Sbjct: 325 DSYGKAK-MYEKMGAVMEYMQKYYYSWTIVTYNVVIDAFGRAGDLEQMEYIF---RLMKS 380
Query: 218 KMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSD--FDISACNRLLGAFSDVGLTEK 275
+ N + + S G EV +I + SD DI N L+ A+ VG +
Sbjct: 381 ERIKPNCVTLCSVVRAYGRAGEVKKIKTALRIIENSDITLDIVFFNCLVDAYGRVGCLAE 440
Query: 276 ANEFHMLLLQKNCAP 290
+ L+ + C P
Sbjct: 441 MWDILDLMKEHRCKP 455
>gi|302813417|ref|XP_002988394.1| hypothetical protein SELMODRAFT_128001 [Selaginella moellendorffii]
gi|300143796|gb|EFJ10484.1| hypothetical protein SELMODRAFT_128001 [Selaginella moellendorffii]
Length = 388
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 105/249 (42%), Gaps = 10/249 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL--MYNEMMTLYMSVGQVEKVALVVE 103
TY L+ ++ + + A EL E++ S + + YN ++ + V V K ++E
Sbjct: 48 TYNTLIDVFHKLERFDSARELLEQMWDSGIRPGVMAETYNNVIASFCEVCNVRKAKGILE 107
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
+ PD+ TYN IS D + + EM + + + Y ++N +
Sbjct: 108 LMIDSGCKPDVVTYNTLISGLCKVRRADDALQLMREME----PAPNTITYNTVINGLWRS 163
Query: 164 SHLVNAESSTLVEAEKSITQRQWI-TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 222
+ E+ L++ S+ + TY+ +I +K ++ +R K +
Sbjct: 164 RK--DTEAQALLDEMISVGCPFSVSTYNCVIANLCRSREMEKAVDVFLYMRKKKCETDEV 221
Query: 223 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 282
+ ++ +L L++ G +D W A D+ + +LL A D G +KA E L
Sbjct: 222 TFATLVDGFLRDKRLEDAGGTLD-WMARAGIPSDVKSYTKLLNALCDRGSAQKACEIFNL 280
Query: 283 LLQKNCAPT 291
++ + APT
Sbjct: 281 MVDRGYAPT 289
Score = 37.7 bits (86), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 3/97 (3%)
Query: 36 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 95
G+P K+ YT LL+ +KA E+F + + + YN ++ +V
Sbjct: 250 GIPSDVKS---YTKLLNALCDRGSAQKACEIFNLMVDRGYAPTLVSYNVLLKGLCKALRV 306
Query: 96 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQ 132
E ++ E++ + + PD+ +Y I A ID+
Sbjct: 307 EHALVLFREMQEREIQPDVVSYTTVIKGLCAARRIDE 343
>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 559
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 70/148 (47%), Gaps = 2/148 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY +L+ Y K KA+ +F + Q ++ N Y+ M+ + + +V++ + +E+
Sbjct: 319 TYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEM 378
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
N++PD+ TYN I I K +DEM D G D + Y ++++ + +H
Sbjct: 379 HCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMH-DRGVPHDKITYNSILDA-LCKNH 436
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLI 193
V+ + L + + Q TY L+
Sbjct: 437 QVDKAIALLTKMKDEGIQPDICTYTTLV 464
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 24/113 (21%), Positives = 52/113 (46%), Gaps = 1/113 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+ L+ + + ++A+ + + + + + YN +M Y V +V K + I
Sbjct: 284 TFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTI 343
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 158
++ V P+I +Y++ I +D+ EM C++ D V Y +L++
Sbjct: 344 SQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNN-IIPDVVTYNSLID 395
Score = 37.4 bits (85), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 47/232 (20%), Positives = 99/232 (42%), Gaps = 15/232 (6%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+Y L++ T A +L RV + N +MYN ++ V V + + E+
Sbjct: 179 SYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEM 238
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K + PD+ TYN IS + ++M ++ + + + LV+ +
Sbjct: 239 VSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNI-LVDGFCKERR 297
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
L A++ + ++ I + TY+ L+ Y + +K I+ ++ Q+ + N
Sbjct: 298 LKEAKNVLAMMMKQGI-KPDVFTYNSLMDRYCLVKEVNKAKHIFNTI---SQRGVNPN-- 351
Query: 226 CILSSYLMLGH----LKEVGEIIDQWKQSATSDF--DISACNRLLGAFSDVG 271
+ SY ++ H +K+V E ++ +K+ ++ D+ N L+ +G
Sbjct: 352 --IHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLG 401
>gi|297826989|ref|XP_002881377.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327216|gb|EFH57636.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 589
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 87/191 (45%), Gaps = 25/191 (13%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQ-------SNLSFNA-----LM-----------Y 82
TYTAL++ +A EKAEE+FE++++ + + A LM Y
Sbjct: 311 TYTALVNAFAREGLCEKAEEIFEQLQEDGHIDSRAGYPYGAAEIFSLMQHMGCEPDRASY 370
Query: 83 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 142
N M+ Y G V EE+KR + P + ++ L +S+ + ++ + + + EMS
Sbjct: 371 NIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSRARDVTKCEAIVKEMS- 429
Query: 143 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNK 202
++G D +++N+Y E L E E TY+ LI +Y G
Sbjct: 430 ENGVEPDTFVLNSMLNLYGRLGQFTKME-KILAEMENGPCTADISTYNILINIYGKAGFL 488
Query: 203 DKIDQIWKSLR 213
++I++++ L+
Sbjct: 489 ERIEELFVELK 499
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 1/106 (0%)
Query: 35 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 94
E P +A S TY L+++Y A + E+ EELF +K+ N + + + + Y
Sbjct: 464 ENGPCTADIS-TYNILINIYGKAGFLERIEELFVELKERNFKPDVVTWTSRIGAYSRKKL 522
Query: 95 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
K + EE+ PD T + +S+C++ ++QV L M
Sbjct: 523 YVKCLEIFEEMIDSGCAPDGGTAKVLLSACSSEDQVEQVTSVLRTM 568
Score = 44.3 bits (103), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 60/118 (50%), Gaps = 3/118 (2%)
Query: 26 GIHS-GERYFEGLPL--SAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 82
G+HS E FE + A T +++ LL Y+ A+ K E + + + ++ + + +
Sbjct: 381 GLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSRARDVTKCEAIVKEMSENGVEPDTFVL 440
Query: 83 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
N M+ LY +GQ K+ ++ E++ DI TYN+ I+ ++++++ E+
Sbjct: 441 NSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVEL 498
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSV-GQVEKVALV 101
T +TYT L+ Y A EKAE + ++ ++S + +YN + M G E+ V
Sbjct: 202 TEDTYTLLIKAYCMAGLIEKAEAVLIEMQNHHVSPSVTVYNAYIEGLMKRKGNTEQAIDV 261
Query: 102 VEEIKRKNVVPDIFTYNLWIS 122
+ +KR P TYNL I+
Sbjct: 262 FQRMKRDRCKPTTETYNLMIN 282
Score = 37.4 bits (85), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 49/255 (19%), Positives = 103/255 (40%), Gaps = 28/255 (10%)
Query: 60 TEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNL 119
TE+A ++F+R+K+ YN M+ LY + + E++ P+I TY
Sbjct: 255 TEQAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLFCEMRSHQCKPNICTYTA 314
Query: 120 WISSCAATLNIDQVKKFLDEMSCDS----------------------GGSDDWVKYVNLV 157
+++ A ++ ++ +++ D G D Y +V
Sbjct: 315 LVNAFAREGLCEKAEEIFEQLQEDGHIDSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMV 374
Query: 158 NIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 217
+ Y A +AE + E ++ ++ L+ Y+ + K + I K M++
Sbjct: 375 DAYGRAGLHSDAE-AVFEEMKRLGIAPTMKSHMLLLSAYSRARDVTKCEAIVK--EMSEN 431
Query: 218 KMTSRNYI--CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEK 275
+ ++ +L+ Y LG ++ +I+ + + + DIS N L+ + G E+
Sbjct: 432 GVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTA-DISTYNILINIYGKAGFLER 490
Query: 276 ANEFHMLLLQKNCAP 290
E + L ++N P
Sbjct: 491 IEELFVELKERNFKP 505
>gi|222635128|gb|EEE65260.1| hypothetical protein OsJ_20463 [Oryza sativa Japonica Group]
Length = 1443
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 79/186 (42%), Gaps = 2/186 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY A++ ++ ++AE +F+ + + +A+ YN ++ + G VE+V V EE+
Sbjct: 330 TYNAMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEEL 389
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ D TYN I +D DEM G + D V Y LV+
Sbjct: 390 VKAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRA-IGCTPDAVTYTVLVDSLGKMDR 448
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ A L E + + +T+ LI YA G +D ++ + + + K Y+
Sbjct: 449 ISEA-GKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYL 507
Query: 226 CILSSY 231
+L +
Sbjct: 508 VMLDVF 513
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 80/184 (43%), Gaps = 2/184 (1%)
Query: 63 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 122
A EL V+Q+ L +A+ YN +++ ++ V EE+ PD++TYN +S
Sbjct: 277 ALELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVS 336
Query: 123 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT 182
+ + E+ + G D V Y +L+ + + E E K+
Sbjct: 337 VHGRCGKAQEAELMFKEL-VEKGFQPDAVTYNSLLYAFAKEGDVERVE-RVCEELVKAGF 394
Query: 183 QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 242
++ ITY+ +I +Y +G D ++ +R + Y ++ S + + E G+
Sbjct: 395 RKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGK 454
Query: 243 IIDQ 246
++++
Sbjct: 455 VLEE 458
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 78/168 (46%), Gaps = 7/168 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L+ + + A +FE + S + YN M++++ G+ ++ L+ +E+
Sbjct: 295 TYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAELMFKEL 354
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K PD TYN + + A ++++V++ +E+ +G D + Y ++++Y
Sbjct: 355 VEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEEL-VKAGFRKDGITYNTMIHMYGKMGR 413
Query: 166 LVNAESSTLVEAEKSI-TQRQWITYDFLIILYAGLGNKDKIDQIWKSL 212
L A L + ++I +TY +L LG D+I + K L
Sbjct: 414 LDLALG--LYDEMRAIGCTPDAVTY---TVLVDSLGKMDRISEAGKVL 456
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 48/96 (50%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
E+Y LL AK E+A+ LFE ++ N +Y+ MM +Y + K ++
Sbjct: 993 ESYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNARNHSKAEHLLSA 1052
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
+K + P I T ++ ++S + + D+ +K L+ +
Sbjct: 1053 MKEDGIEPTIATMHILMTSYGTSGHPDEAEKVLNSL 1088
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 36/183 (19%), Positives = 83/183 (45%), Gaps = 2/183 (1%)
Query: 50 LLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKN 109
LL +Y G ++ E++ + ++ L + YN ++ +Y + E+ ++ E+ ++
Sbjct: 928 LLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRPEEGFTLLYEMGKRG 987
Query: 110 VVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 169
+ P + +Y + +++ +Q +EM G + Y ++ IY A + A
Sbjct: 988 LTPKLESYKILLAASGKAKLWEQADLLFEEMRT-KGYRLNRSIYHMMMKIYRNARNHSKA 1046
Query: 170 ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILS 229
E E I + T L+ Y G+ D+ +++ SL+ + ++++ Y +L
Sbjct: 1047 EHLLSAMKEDGI-EPTIATMHILMTSYGTSGHPDEAEKVLNSLKSSNLEISTLPYSTVLD 1105
Query: 230 SYL 232
+YL
Sbjct: 1106 AYL 1108
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/164 (18%), Positives = 78/164 (47%), Gaps = 7/164 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY ++H+Y + A L++ ++ + +A+ Y ++ + ++ + V+EE+
Sbjct: 400 TYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEM 459
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ P + T++ I + A + D ++ D M +SG D + Y+ +++++ +
Sbjct: 460 ADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRM-VESGVKPDRLAYLVMLDVFARSD- 517
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLI-ILYAGLGNKDKIDQI 208
E+ L+ +++ + + D L +L A L ++ D+I
Sbjct: 518 ----ETRKLMVLYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEI 557
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 62/125 (49%), Gaps = 1/125 (0%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
+TY+ L+H + +A +F +++ L NA YN +++ G V+K + ++EE
Sbjct: 592 QTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEE 651
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+ K + PDI TYN+ I I++ K D++ G + + V Y +V+ Y +
Sbjct: 652 MCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIE-GRGLTPNCVTYAAMVDGYCKSK 710
Query: 165 HLVNA 169
+ A
Sbjct: 711 NPTAA 715
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 89/205 (43%), Gaps = 11/205 (5%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L+ A E+A+ LF+ ++ L+ N + Y M+ Y ++EE+
Sbjct: 663 TYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEM 722
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ V PD F YN+ ++ C ++ EM G V + L+ Y +
Sbjct: 723 LLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEML--EKGFASTVSFNTLIEGYCKSGK 780
Query: 166 LVNAESSTLVEAEKSITQRQWI----TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 221
L E++ L+E + ++Q+I TY LI G + ++W ++ T+
Sbjct: 781 L--QEANHLLE---EMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTA 835
Query: 222 RNYICILSSYLMLGHLKEVGEIIDQ 246
+ Y +L Y +G++ EV + ++
Sbjct: 836 KTYTSLLHGYHNIGNMSEVSALFEE 860
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 54/101 (53%), Gaps = 2/101 (1%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
A T TY+ +++ + + + + L NA++Y +MT + G+VE+ +
Sbjct: 413 APTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRM 472
Query: 101 VVEEIKRKNVVPDIFTYN-LWISSCAATLNIDQVKKFLDEM 140
++E ++ + ++PD+F YN L I C A +++ + +L EM
Sbjct: 473 ILERMREQGILPDVFCYNSLIIGFCKAK-RMEEARTYLMEM 512
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 47/245 (19%), Positives = 95/245 (38%), Gaps = 38/245 (15%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY AL+ + E+A + + + + N +++N ++ G++EK +++E+
Sbjct: 313 TYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEM 372
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K V PD TY+L I N+ + + LDEM
Sbjct: 373 MEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEM------------------------- 407
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+K +TY +I GN + I + + M K + Y
Sbjct: 408 ------------KKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYT 455
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 285
+++++ G ++E I+++ ++ D+ N L+ F E+A + M +L+
Sbjct: 456 TLMTAHAKEGRVEESRMILERMREQGILP-DVFCYNSLIIGFCKAKRMEEARTYLMEMLE 514
Query: 286 KNCAP 290
+ P
Sbjct: 515 RRLRP 519
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 72/161 (44%), Gaps = 5/161 (3%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSET---YTALLHLYAGAKWTEKAEELFERV 70
Y ID +K + +RYF + LS YTAL+ + +A +F +
Sbjct: 524 YGAFIDGYSKAGEMEIADRYFNEM-LSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFI 582
Query: 71 KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 130
+ + Y+ ++ G++ + + E++ K ++P+ FTYN IS N+
Sbjct: 583 LSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNV 642
Query: 131 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES 171
D+ + L+EM C G + D V Y L++ A + A++
Sbjct: 643 DKASQLLEEM-CIKGINPDIVTYNILIDGLCKAGEIERAKN 682
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 49/95 (51%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT+L+ A +A+ L+ +++ N+ A Y ++ Y ++G + +V+ + EE+
Sbjct: 802 TYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEM 861
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
K + PD TY + I + N+ + K DE+
Sbjct: 862 VAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEI 896
>gi|58013026|gb|AAW62966.1| chloroplast embryo-defective 1270 [Arabidopsis thaliana]
Length = 1429
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 95/205 (46%), Gaps = 10/205 (4%)
Query: 38 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYM-SVGQVE 96
P + Y A++ +Y+ + KA+EL + ++Q + + +N ++ + S G
Sbjct: 219 PTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTP 278
Query: 97 KVAL-VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 155
+A+ +++ ++ + PD TYN +S+C+ N+D K ++M D W Y
Sbjct: 279 NLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWT-YNA 337
Query: 156 LVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR-- 213
++++Y AE +E E +TY+ L+ +A N +K+ ++++ ++
Sbjct: 338 MISVYGRCGLAAEAE-RLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKM 396
Query: 214 -MTKQKMTSRNYICILSSYLMLGHL 237
K +MT Y I+ Y G L
Sbjct: 397 GFGKDEMT---YNTIIHMYGKQGQL 418
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/186 (19%), Positives = 92/186 (49%), Gaps = 2/186 (1%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
+ ++L +Y + +K ++++R+K++ L + YN ++ +Y + E+ L++++++
Sbjct: 930 WNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMR 989
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
+ P + TY IS+ ++Q ++ +E+ G D Y ++ I +
Sbjct: 990 NLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEEL-LSKGLKLDRSFYHTMMKISRDSGSD 1048
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 226
AE L + + + T L++ Y+ GN + +++ +L+ T+ ++T+ Y
Sbjct: 1049 SKAE-KLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSS 1107
Query: 227 ILSSYL 232
++ +YL
Sbjct: 1108 VIDAYL 1113
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 79/187 (42%), Gaps = 1/187 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY A++ +Y +AE LF ++ +A+ YN ++ + EKV V +++
Sbjct: 334 TYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQM 393
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
++ D TYN I +D + +M SG + D + Y L++ A+
Sbjct: 394 QKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANR 453
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
V A ++ + E + TY LI YA G +++ + + + + K + Y
Sbjct: 454 TVEA-AALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYS 512
Query: 226 CILSSYL 232
+L L
Sbjct: 513 VMLDVLL 519
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 59/119 (49%), Gaps = 1/119 (0%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
+TY +L+ + K E+AE+LFE + L + Y+ MM + G K +++
Sbjct: 998 DTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQM 1057
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
+K + P + T +L + S +++ N + +K L + D+ + Y ++++ Y+ +
Sbjct: 1058 MKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLK-DTEVELTTLPYSSVIDAYLRS 1115
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 101/252 (40%), Gaps = 24/252 (9%)
Query: 52 HLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVV 111
L +G A EL + V+ S L +A+ YN +++ ++ V E+++
Sbjct: 270 RLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQ 329
Query: 112 PDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES 171
PD++TYN IS + ++ E+ G D V Y +L+ + N E
Sbjct: 330 PDLWTYNAMISVYGRCGLAAEAERLFMELEL-KGFFPDAVTYNSLLYAFARER---NTEK 385
Query: 172 STLV--EAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILS 229
V + +K + +TY+ +I +Y G D Q++K ++ ++ RN I
Sbjct: 386 VKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMK----GLSGRNPDAITY 441
Query: 230 SYLM--LGHLKE-------VGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 280
+ L+ LG + E++D + + C ++ G E+A +
Sbjct: 442 TVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALIC-----GYAKAGKREEAEDTF 496
Query: 281 MLLLQKNCAPTN 292
+L+ P N
Sbjct: 497 SCMLRSGTKPDN 508
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/117 (21%), Positives = 49/117 (41%), Gaps = 2/117 (1%)
Query: 7 FVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAE 64
F +S S +D + I ++ + + + T Y ++ L K AE
Sbjct: 853 FKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAE 912
Query: 65 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 121
+ ++++N ++N M+ +Y ++ +K V + IK + PD TYN I
Sbjct: 913 IMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLI 969
>gi|413952776|gb|AFW85425.1| chloroplast RNA splicing4 [Zea mays]
Length = 1435
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 91/199 (45%), Gaps = 2/199 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY +LL+ +A +K E E++ ++ N + YN M+ +Y +G+++ + +E+
Sbjct: 365 TYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEM 424
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ PD TY + I S I + K L++M+ D+G + + L+ Y
Sbjct: 425 RAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMT-DAGLKPTLIAFSALICAYAKGGR 483
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+AE +T S + + Y ++ ++A G+ +K+ +++ + + Y
Sbjct: 484 RADAE-NTFDCMIASGVKPDRLAYLVMLDVFARSGDTEKMLCLYRKMMNDNYRPDDDMYQ 542
Query: 226 CILSSYLMLGHLKEVGEII 244
+L + +E+ E+I
Sbjct: 543 VLLVALAKEDKCEEIEEVI 561
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 89/197 (45%), Gaps = 4/197 (2%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK-VAL- 100
T + + A++ +YA + + A +L + + + + + +N ++ G + VAL
Sbjct: 220 TVQVFNAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVALD 279
Query: 101 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
++ E+++ + PD+ TYN IS+C+ + N++ ++M D W Y +V+++
Sbjct: 280 LLFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWT-YNAMVSVH 338
Query: 161 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 220
AE EK ITY+ L+ +A GN DK++ + L K
Sbjct: 339 GRCGKAEEAERLFRELVEKGFMP-DAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKN 397
Query: 221 SRNYICILSSYLMLGHL 237
Y ++ Y +G L
Sbjct: 398 EITYNTMIHMYGKMGRL 414
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 76/190 (40%), Gaps = 2/190 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY A++ ++ E+AE LF + + +A+ YN ++ + G V+KV E++
Sbjct: 330 TYNAMVSVHGRCGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQL 389
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ + TYN I +D DEM G + D V Y +++ +
Sbjct: 390 VKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRA-MGCTPDAVTYTVMIDSLGKMNR 448
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ A L + + + I + LI YA G + + + + + K Y+
Sbjct: 449 IAEA-GKVLEDMTDAGLKPTLIAFSALICAYAKGGRRADAENTFDCMIASGVKPDRLAYL 507
Query: 226 CILSSYLMLG 235
+L + G
Sbjct: 508 VMLDVFARSG 517
Score = 44.3 bits (103), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 36/187 (19%), Positives = 86/187 (45%), Gaps = 2/187 (1%)
Query: 49 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 108
ALL++Y A ++ +++ + ++ L + YN ++ +Y + E+ ++ E+ ++
Sbjct: 925 ALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKR 984
Query: 109 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVN 168
+ P + +Y +++ A +Q + +EM S + + Y ++ IY A +
Sbjct: 985 GLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSI-YHMMMKIYRNAGNHSK 1043
Query: 169 AESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICIL 228
AE+ V E I + T L+ Y G + + + +L+ + ++++ Y +
Sbjct: 1044 AENLLAVMKEDGI-EPTIATMHILMTSYGTAGQPREAENVLNNLKSSSLEVSTLPYSTVF 1102
Query: 229 SSYLMLG 235
+YL G
Sbjct: 1103 DAYLKNG 1109
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 79/166 (47%), Gaps = 2/166 (1%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
+ AL+H YA + EKA +F+ + ++ N MM + G+++++ +VVEE++
Sbjct: 783 WNALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYVVVEELQ 842
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
N T L + + A ++ +V K + M +G + Y +++++ +
Sbjct: 843 DMNFKISKSTVLLLLDAFAKAGDVFEVMKIYNGMKA-AGYLPNMHLYRSMISLLCHHNRF 901
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 212
+ E + E E + + + L+ +Y GN D+ Q+++S+
Sbjct: 902 RDVE-LMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSI 946
>gi|242065966|ref|XP_002454272.1| hypothetical protein SORBIDRAFT_04g027800 [Sorghum bicolor]
gi|241934103|gb|EES07248.1| hypothetical protein SORBIDRAFT_04g027800 [Sorghum bicolor]
Length = 519
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 101/216 (46%), Gaps = 5/216 (2%)
Query: 33 YFEGLPLSAKTSET---YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLY 89
YFE + A+ T Y LL +A A T++ + LF+ + +S +S + YN ++ Y
Sbjct: 184 YFEKMKCIARCQPTIVTYNILLRAFAQAGDTKQVDILFKDLDESVVSPDIYTYNGVLDAY 243
Query: 90 MSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDD 149
G ++++ V+ +K K PD+ T+N+ I S D++++ + S
Sbjct: 244 GKNGMIKEMESVLLRMKSKQCRPDVITFNILIDSYGRKQIFDKMEQVFKSL-LRSKERPT 302
Query: 150 WVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIW 209
+ +++ Y A AE + + E+ + ++T + LI++YA K Q++
Sbjct: 303 HPTFNSMITNYGKARLREKAE-YVVKKMEELGYKPNYVTQECLIMMYAHCDCVSKARQVF 361
Query: 210 KSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIID 245
L ++ K+ + +L +Y M G E +++D
Sbjct: 362 DELVSSQNKVQLSSLNSMLDAYCMNGLHTEADQLLD 397
>gi|334185431|ref|NP_188439.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|322510063|sp|Q5G1S8.2|PP241_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g18110, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 1270; Flags: Precursor
gi|9294066|dbj|BAB02023.1| unnamed protein product [Arabidopsis thaliana]
gi|332642528|gb|AEE76049.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1440
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 95/205 (46%), Gaps = 10/205 (4%)
Query: 38 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYM-SVGQVE 96
P + Y A++ +Y+ + KA+EL + ++Q + + +N ++ + S G
Sbjct: 219 PTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTP 278
Query: 97 KVAL-VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 155
+A+ +++ ++ + PD TYN +S+C+ N+D K ++M D W Y
Sbjct: 279 NLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWT-YNA 337
Query: 156 LVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR-- 213
++++Y AE +E E +TY+ L+ +A N +K+ ++++ ++
Sbjct: 338 MISVYGRCGLAAEAE-RLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKM 396
Query: 214 -MTKQKMTSRNYICILSSYLMLGHL 237
K +MT Y I+ Y G L
Sbjct: 397 GFGKDEMT---YNTIIHMYGKQGQL 418
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/186 (19%), Positives = 92/186 (49%), Gaps = 2/186 (1%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
+ ++L +Y + +K ++++R+K++ L + YN ++ +Y + E+ L++++++
Sbjct: 930 WNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMR 989
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
+ P + TY IS+ ++Q ++ +E+ G D Y ++ I +
Sbjct: 990 NLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEEL-LSKGLKLDRSFYHTMMKISRDSGSD 1048
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 226
AE L + + + T L++ Y+ GN + +++ +L+ T+ ++T+ Y
Sbjct: 1049 SKAE-KLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSS 1107
Query: 227 ILSSYL 232
++ +YL
Sbjct: 1108 VIDAYL 1113
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 79/187 (42%), Gaps = 1/187 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY A++ +Y +AE LF ++ +A+ YN ++ + EKV V +++
Sbjct: 334 TYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQM 393
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
++ D TYN I +D + +M SG + D + Y L++ A+
Sbjct: 394 QKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANR 453
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
V A ++ + E + TY LI YA G +++ + + + + K + Y
Sbjct: 454 TVEA-AALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYS 512
Query: 226 CILSSYL 232
+L L
Sbjct: 513 VMLDVLL 519
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 59/119 (49%), Gaps = 1/119 (0%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
+TY +L+ + K E+AE+LFE + L + Y+ MM + G K +++
Sbjct: 998 DTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQM 1057
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
+K + P + T +L + S +++ N + +K L + D+ + Y ++++ Y+ +
Sbjct: 1058 MKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLK-DTEVELTTLPYSSVIDAYLRS 1115
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 48/244 (19%), Positives = 100/244 (40%), Gaps = 8/244 (3%)
Query: 52 HLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVV 111
L +G A EL + V+ S L +A+ YN +++ ++ V E+++
Sbjct: 270 RLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQ 329
Query: 112 PDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES 171
PD++TYN IS + ++ E+ G D V Y +L+ + + N E
Sbjct: 330 PDLWTYNAMISVYGRCGLAAEAERLFMELEL-KGFFPDAVTYNSLLYAF---ARERNTEK 385
Query: 172 STLV--EAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR-MTKQKMTSRNYICIL 228
V + +K + +TY+ +I +Y G D Q++K ++ ++ + + Y ++
Sbjct: 386 VKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLI 445
Query: 229 SSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 288
S E ++ + + + L+ ++ G E+A + +L+
Sbjct: 446 DSLGKANRTVEAAALMSEMLDVGIKP-TLQTYSALICGYAKAGKREEAEDTFSCMLRSGT 504
Query: 289 APTN 292
P N
Sbjct: 505 KPDN 508
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/117 (21%), Positives = 49/117 (41%), Gaps = 2/117 (1%)
Query: 7 FVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAE 64
F +S S +D + I ++ + + + T Y ++ L K AE
Sbjct: 853 FKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAE 912
Query: 65 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 121
+ ++++N ++N M+ +Y ++ +K V + IK + PD TYN I
Sbjct: 913 IMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLI 969
>gi|356513567|ref|XP_003525484.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 857
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 113/260 (43%), Gaps = 6/260 (2%)
Query: 34 FEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMS 91
F+ +P + +T +YTA+++ Y + EL +KQ +S + L YN ++
Sbjct: 157 FDEMPSNGVVRTVYSYTAIINAYGRNGQFHASLELLNGMKQERVSPSILTYNTVINACAR 216
Query: 92 VG-QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDW 150
G E + + E++ + + PD+ TYN + +CA D+ + M+ +SG D
Sbjct: 217 GGLDWEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMN-ESGIVPDI 275
Query: 151 VKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK 210
Y LV + + L S L E E +Y+ L+ YA LG+ + +++
Sbjct: 276 NTYSYLVQTFGKLNRLEKV-SELLREMECGGNLPDITSYNVLLEAYAELGSIKEAMGVFR 334
Query: 211 SLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDV 270
++ + Y +L+ Y G +V ++ + K S T D D N L+ F +
Sbjct: 335 QMQAAGCVANAATYSVLLNLYGKHGRYDDVRDLFLEMKVSNT-DPDAGTYNILIQVFGEG 393
Query: 271 GLTEKANEFHMLLLQKNCAP 290
G ++ + ++N P
Sbjct: 394 GYFKEVVTLFHDMAEENVEP 413
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 104/258 (40%), Gaps = 20/258 (7%)
Query: 46 TYTALLHLYA--GAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
TY +++ A G W E LF ++ + + + YN ++ G ++ +V
Sbjct: 206 TYNTVINACARGGLDW-EGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFR 264
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
+ +VPDI TY+ + + +++V + L EM C G D Y L+ Y
Sbjct: 265 TMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMEC-GGNLPDITSYNVLLEAY--- 320
Query: 164 SHLVNAESSTLVEAEKSITQRQ-------WITYDFLIILYAGLGNKDKIDQIWKSLRMTK 216
AE ++ EA Q Q TY L+ LY G D + ++ ++++
Sbjct: 321 -----AELGSIKEAMGVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDLFLEMKVSN 375
Query: 217 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
+ Y ++ + G+ KEV + + ++ L+ A GL E A
Sbjct: 376 TDPDAGTYNILIQVFGEGGYFKEVVTLFHDMAEENVEP-NMQTYEGLIFACGKGGLYEDA 434
Query: 277 NEFHMLLLQKNCAPTNAS 294
+ + + +K P++ +
Sbjct: 435 KKILLHMNEKGVVPSSKA 452
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 83/206 (40%), Gaps = 3/206 (1%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
+T ++ L +K E+F+ + + + Y ++ Y GQ ++ +K
Sbjct: 137 HTIMITLLGREGLLDKCREVFDEMPSNGVVRTVYSYTAIINAYGRNGQFHASLELLNGMK 196
Query: 107 RKNVVPDIFTYNLWISSCA-ATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
++ V P I TYN I++CA L+ + + EM + G D + Y L+
Sbjct: 197 QERVSPSILTYNTVINACARGGLDWEGLLGLFAEMRHE-GIQPDVITYNTLLGACAHRGL 255
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
AE E I TY +L+ + L +K+ ++ + + +Y
Sbjct: 256 GDEAEMVFRTMNESGIVP-DINTYSYLVQTFGKLNRLEKVSELLREMECGGNLPDITSYN 314
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSA 251
+L +Y LG +KE + Q + +
Sbjct: 315 VLLEAYAELGSIKEAMGVFRQMQAAG 340
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 48/245 (19%), Positives = 98/245 (40%), Gaps = 38/245 (15%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY+ LL+LY + +LF +K SN +A YN ++ ++ G ++V + ++
Sbjct: 347 TYSVLLNLYGKHGRYDDVRDLFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDM 406
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+NV P++ TY I +C + KK L M+ + G Y ++ + A+
Sbjct: 407 AEENVEPNMQTYEGLIFACGKGGLYEDAKKILLHMN-EKGVVPSSKAYTGVIEAFGQAA- 464
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
Y+ ++++ ++ T Y
Sbjct: 465 ----------------------LYEEALVMF-------------NTMNEVGSNPTVETYN 489
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 285
++ ++ G KE I+ + +S D+ + N ++ AF G E+A + ++ + +
Sbjct: 490 SLIHAFARGGLYKEAEAILSRMNESGLKR-DVHSFNGVIEAFRQGGQYEEAVKSYVEMEK 548
Query: 286 KNCAP 290
NC P
Sbjct: 549 ANCEP 553
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 63/131 (48%), Gaps = 3/131 (2%)
Query: 40 SAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVA 99
S T ETY +L+H +A ++AE + R+ +S L + +N ++ + GQ E+
Sbjct: 481 SNPTVETYNSLIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIEAFRQGGQYEEAV 540
Query: 100 LVVEEIKRKNVVPDIFTYNLWIS-SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 158
E+++ N P+ T +S C+A L +D+ ++ E+ SG + Y ++
Sbjct: 541 KSYVEMEKANCEPNELTLEAVLSIYCSAGL-VDEGEEQFQEIKA-SGILPSVMCYCMMLA 598
Query: 159 IYITASHLVNA 169
+Y L +A
Sbjct: 599 LYAKNDRLNDA 609
>gi|302819136|ref|XP_002991239.1| hypothetical protein SELMODRAFT_448344 [Selaginella moellendorffii]
gi|300140950|gb|EFJ07667.1| hypothetical protein SELMODRAFT_448344 [Selaginella moellendorffii]
Length = 561
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 97/216 (44%), Gaps = 12/216 (5%)
Query: 40 SAKTSETYTALLHLYAGAKWTEKAEELFERVKQS---NLSFNALMYNEMMTLYMSVGQVE 96
+ T++TY ++ Y+ A + + +F+ V S + +A MYN M+ Y G+VE
Sbjct: 220 PSPTAQTYQTMMKSYSEAGRLDDVQRIFKLVTDSPSPTVKPDARMYNLMIHTYGKQGKVE 279
Query: 97 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 156
+ V + +KR+ V I T+N ++ + + V + L D D Y L
Sbjct: 280 QAMSVYQSMKRERVALTIVTFNSLLACQKTWKDAEDVFRKLQAAKLDP----DVFSYTAL 335
Query: 157 VNIYITA--SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM 214
VN Y A + +A ++ A TQ + Y+ LI YA + + + K ++
Sbjct: 336 VNAYAKARRAECAHAAFDDMIAAGIRPTQ---VAYNALINAYAKCKDPEGARAVLKQMKQ 392
Query: 215 TKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQS 250
T +Y ++S+Y+ + + + + + + K++
Sbjct: 393 NGCTPTVESYTSLISAYVSVNLMAKAEQTVLRMKEA 428
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 57/119 (47%), Gaps = 1/119 (0%)
Query: 42 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 101
T Y AL++ YA K E A + +++KQ+ + Y +++ Y+SV + K
Sbjct: 362 PTQVAYNALINAYAKCKDPEGARAVLKQMKQNGCTPTVESYTSLISAYVSVNLMAKAEQT 421
Query: 102 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
V +K ++ P++ T+ + ++ A +D + + + M +G + Y LVN Y
Sbjct: 422 VLRMKEADLQPNLQTFCVLMTGYANGNKLDNMMRSFETMKL-AGLEPNRHVYTVLVNAY 479
>gi|357111163|ref|XP_003557384.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Brachypodium distachyon]
Length = 821
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 101/226 (44%), Gaps = 3/226 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+YT LL+ Y + EKA E F+ +++++ N + YN ++ Y S G ++ ++ E+
Sbjct: 404 SYTTLLNAYGRSGQPEKAREAFKEMRKNSCRPNIVSYNALIDAYGSAGMFKEAISLLHEM 463
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
++ + PD+ + + +++C I ++ L E + G + V Y + + Y+
Sbjct: 464 EKDGIPPDVVSISTLLTACGRCRQITKIDTIL-EAAKSRGIKLNIVCYNSGIGSYLNFGD 522
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
A V ++ +TY+ LI +G + + ++ + + +T Y
Sbjct: 523 YGKALELYAVMMASNVNPDA-VTYNILISGLCKVGKYAESLKFFEDMVDLRIPLTKEVYS 581
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 271
++ SY+ G L E K+S D+ ++ A++D G
Sbjct: 582 SLICSYVKQGKLTEAESTFSSMKESGCLP-DVLTYTAMIEAYNDDG 626
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 106/254 (41%), Gaps = 15/254 (5%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
++ Y ++ L+A ++A LF +++ +A +YN ++ + GQ +++
Sbjct: 155 NDIYGMMIRLHARHSQIDQARGLFFEMQEWRCKPDADIYNSLIHAHARAGQWRWAINIMD 214
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
++ R + P TYN I++C A N + + +M+ + G D LV I
Sbjct: 215 DMLRAAIPPSRTTYNNVINACGAAGNWKKALELCKKMTRNGVGPD-------LVTHNIVL 267
Query: 164 SHLVNAESSTLVEAEKSITQRQWI---TYDFLIILYAGL--GNKDKIDQIWKSLRMTKQK 218
S N + A + + I T+ I+++ + G + ++ S+R + +
Sbjct: 268 SAFKNGSQYSKAIAYFEMMKGANIAPDTFTLNIVIHCLVKDGQYGEAIELLNSMREKRTQ 327
Query: 219 MTSR--NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
Y I+ SY + G +++ + D +I + N LLGA++ G+ A
Sbjct: 328 CPPDVVTYTSIMHSYYVCGKVEDCKAVFDMMVAEGVKP-NIVSYNALLGAYASRGMHADA 386
Query: 277 NEFHMLLLQKNCAP 290
LL Q P
Sbjct: 387 LGIFKLLKQNGLRP 400
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 82/195 (42%), Gaps = 4/195 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+Y ALL YA A +F+ +KQ+ L + + Y ++ Y GQ EK +E+
Sbjct: 369 SYNALLGAYASRGMHADALGIFKLLKQNGLRPDVVSYTTLLNAYGRSGQPEKAREAFKEM 428
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
++ + P+I +YN I + + + L EM D G D V L+
Sbjct: 429 RKNSCRPNIVSYNALIDAYGSAGMFKEAISLLHEMEKD-GIPPDVVSISTLLTACGRCRQ 487
Query: 166 LVNAESSTLVEAEKSI-TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
+ + T++EA KS + + Y+ I Y G+ K +++ + + + Y
Sbjct: 488 ITKID--TILEAAKSRGIKLNIVCYNSGIGSYLNFGDYGKALELYAVMMASNVNPDAVTY 545
Query: 225 ICILSSYLMLGHLKE 239
++S +G E
Sbjct: 546 NILISGLCKVGKYAE 560
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 96/231 (41%), Gaps = 13/231 (5%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT+++H Y E + +F+ + + N + YN ++ Y S G + + +
Sbjct: 334 TYTSIMHSYYVCGKVEDCKAVFDMMVAEGVKPNIVSYNALLGAYASRGMHADALGIFKLL 393
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K+ + PD+ +Y +++ + ++ ++ EM +S + V Y L++ Y +A
Sbjct: 394 KQNGLRPDVVSYTTLLNAYGRSGQPEKAREAFKEMRKNS-CRPNIVSYNALIDAYGSAGM 452
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
A S L E EK ++ L+ KID I L K + N +
Sbjct: 453 FKEA-ISLLHEMEKDGIPPDVVSISTLLTACGRCRQITKIDTI---LEAAKSRGIKLNIV 508
Query: 226 CI---LSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC--NRLLGAFSDVG 271
C + SYL G + G+ ++ + S+ + A N L+ VG
Sbjct: 509 CYNSGIGSYLNFG---DYGKALELYAVMMASNVNPDAVTYNILISGLCKVG 556
Score = 40.4 bits (93), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 48/254 (18%), Positives = 102/254 (40%), Gaps = 15/254 (5%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
++ Y +L+H +A A A + + + ++ + + YN ++ + G +K + +
Sbjct: 190 ADIYNSLIHAHARAGQWRWAINIMDDMLRAAIPPSRTTYNNVINACGAAGNWKKALELCK 249
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV------ 157
++ R V PD+ T+N+ +S+ + + + M + D + +N+V
Sbjct: 250 KMTRNGVGPDLVTHNIVLSAFKNGSQYSKAIAYFEMMKGANIAPDTFT--LNIVIHCLVK 307
Query: 158 -NIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 216
Y A L+N+ + + +TY ++ Y G + ++ +
Sbjct: 308 DGQYGEAIELLNSMREKRTQCPPDV-----VTYTSIMHSYYVCGKVEDCKAVFDMMVAEG 362
Query: 217 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
K +Y +L +Y G + I KQ+ D+ + LL A+ G EKA
Sbjct: 363 VKPNIVSYNALLGAYASRGMHADALGIFKLLKQNGLRP-DVVSYTTLLNAYGRSGQPEKA 421
Query: 277 NEFHMLLLQKNCAP 290
E + + +C P
Sbjct: 422 REAFKEMRKNSCRP 435
>gi|168000162|ref|XP_001752785.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695948|gb|EDQ82289.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 482
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 93/222 (41%), Gaps = 10/222 (4%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSAKT---SETYTALLHLYAGAKWTEKAEELFERV 70
Y I+ + K + ER F+ L SA+ + Y +LH Y A + + LF ++
Sbjct: 180 YQVYINALCKAERFNDAERIFKCLDESAEAKPDARLYNLMLHTYGKAGKFSEQQALFRQM 239
Query: 71 KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 130
K + + + +N +M +V E + ++ + PD+ TY I++ + +
Sbjct: 240 KGAGVPMTVVTFNSLMAFQKTVADAEAC---LRHMQAAKIKPDVITYTGLINAYSKARRV 296
Query: 131 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWI-TY 189
++ EM SG + Y L++ Y + AES L ++ R I +Y
Sbjct: 297 EEAHVVFREMVA-SGLRPSRIAYNTLLDAYAKCKEVEGAES--LFKSMGQDRCRPDIRSY 353
Query: 190 DFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSY 231
L+ YA GN K +++ K ++ + Y ++ Y
Sbjct: 354 TTLLAAYANTGNMKKAERLLKRMKQAGLEPNVVTYGTLMQGY 395
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 72/148 (48%), Gaps = 2/148 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT L++ Y+ A+ E+A +F + S L + + YN ++ Y +VE + + +
Sbjct: 282 TYTGLINAYSKARRVEEAHVVFREMVASGLRPSRIAYNTLLDAYAKCKEVEGAESLFKSM 341
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ PDI +Y +++ A T N+ + ++ L M +G + V Y L+ Y T+ H
Sbjct: 342 GQDRCRPDIRSYTTLLAAYANTGNMKKAERLLKRMK-QAGLEPNVVTYGTLMQGY-TSVH 399
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLI 193
+NA T + +K+ + + L+
Sbjct: 400 DINAMLQTFEDLQKAGIKPNSTIFTLLV 427
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 60/138 (43%), Gaps = 3/138 (2%)
Query: 14 YATRIDLMTKVFGIHSGERYFE--GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVK 71
Y T +D K + E F+ G +YT LL YA +KAE L +R+K
Sbjct: 318 YNTLLDAYAKCKEVEGAESLFKSMGQDRCRPDIRSYTTLLAAYANTGNMKKAERLLKRMK 377
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
Q+ L N + Y +M Y SV + + E++++ + P+ + L + + + +
Sbjct: 378 QAGLEPNVVTYGTLMQGYTSVHDINAMLQTFEDLQKAGIKPNSTIFTLLVRTFGQQEDFE 437
Query: 132 QVKKFLDEMSCDSGGSDD 149
+ +M DSG D
Sbjct: 438 SALSWFKKM-LDSGCPAD 454
>gi|242082131|ref|XP_002445834.1| hypothetical protein SORBIDRAFT_07g026590 [Sorghum bicolor]
gi|241942184|gb|EES15329.1| hypothetical protein SORBIDRAFT_07g026590 [Sorghum bicolor]
Length = 426
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 73/147 (49%), Gaps = 6/147 (4%)
Query: 36 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 95
GLPLS T++A++ Y ++ ++A E+F R+ + +YN ++ + G
Sbjct: 141 GLPLS---PTTFSAVISSYGHSRLPDQAVEVFNRLPRFGCPQTTEVYNALLDALCANGNF 197
Query: 96 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 155
++ + RK V PD T++ + S A +++ + FLD+M+ S G V+ +
Sbjct: 198 TGAYKLLRRMARKGVAPDRATFSTLVDSWCAAGKLNEAQAFLDDMA--SRGFRPPVRGRD 255
Query: 156 -LVNIYITASHLVNAESSTLVEAEKSI 181
LV+ + A HL A++ L ++ I
Sbjct: 256 LLVDGLVRAGHLEEAKAFALRMTKEGI 282
>gi|356510655|ref|XP_003524052.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
chloroplastic-like [Glycine max]
Length = 712
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 69/135 (51%), Gaps = 4/135 (2%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVK 71
Y T ++ M K FE + S +T TA++ +Y A+W+ A EL++R+K
Sbjct: 332 YNTLLEAMGKAGKPGFARGLFEEMIESGIVPNEKTLTAVIKIYGKARWSRDALELWQRMK 391
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK-NVVPDIFTYNLWISSCAATLNI 130
++ + ++YN ++ + VG VE+ + ++K+ + PD ++Y ++ + ++
Sbjct: 392 ENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSVHCKPDSWSYTAMLNIYGSQGDV 451
Query: 131 DQVKKFLDEMSCDSG 145
D+ K DEM C G
Sbjct: 452 DKAMKLFDEM-CKLG 465
Score = 37.0 bits (84), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 99/248 (39%), Gaps = 19/248 (7%)
Query: 36 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 95
G+PL + TY+ ++ +KA FER+ ++ L + + Y+ ++ +Y +G+V
Sbjct: 219 GVPLD---NITYSTIISCAKKCNLYDKAVHWFERMYKTGLMPDEVTYSAILDVYARLGKV 275
Query: 96 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 155
E+V + E + PD T+++ + D ++ EM G + V Y
Sbjct: 276 EEVISLYERGRATGWKPDPITFSVLGKMFGEAGDYDGIRYVFQEME-SVGVQPNLVVYNT 334
Query: 156 LVNIYITASHLVNAES-------STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQI 208
L+ A A S +V EK++T +I +Y ++
Sbjct: 335 LLEAMGKAGKPGFARGLFEEMIESGIVPNEKTLTA--------VIKIYGKARWSRDALEL 386
Query: 209 WKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFS 268
W+ ++ M Y +L+ +G ++E + KQS D + +L +
Sbjct: 387 WQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSVHCKPDSWSYTAMLNIYG 446
Query: 269 DVGLTEKA 276
G +KA
Sbjct: 447 SQGDVDKA 454
>gi|302755068|ref|XP_002960958.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
gi|300171897|gb|EFJ38497.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
Length = 479
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 49/96 (51%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T ALL L A+ +E+ +F R+ + NAL Y ++ G+++K + E+
Sbjct: 2 TCNALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEM 61
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 141
R+ +VPD+FTYN+ I + I + +F + M
Sbjct: 62 AREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMP 97
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 79/196 (40%), Gaps = 7/196 (3%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQS 73
Y ID + K I +FE +P TY LL +A LF ++ +
Sbjct: 73 YNVVIDTLCKARRISRAIEFFETMP--EPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGA 130
Query: 74 NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQV 133
++ + + Y ++ ++ + Q E +++ + + P +++Y I+ +DQ
Sbjct: 131 GITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQA 190
Query: 134 KKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLI 193
+ +EM +G D V Y L++ L A+ V E Q IT+ LI
Sbjct: 191 YQLFEEMKL-AGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGF-QPDKITFTALI 248
Query: 194 ILYAGLGNKDKIDQIW 209
GL D+I + +
Sbjct: 249 ---EGLCTTDRIKEAF 261
>gi|90399139|emb|CAJ86163.1| H0913C04.4 [Oryza sativa Indica Group]
gi|125550286|gb|EAY96108.1| hypothetical protein OsI_17985 [Oryza sativa Indica Group]
Length = 900
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 98/220 (44%), Gaps = 16/220 (7%)
Query: 39 LSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV 98
LS+ Y+ ++H + + E+AEEL +++ + +Y+ MM Y + K
Sbjct: 363 LSSLNGIIYSNIIHAHCQSGNMERAEELVCEMEEDGIDAPIDVYHSMMHGYTIIQNENKC 422
Query: 99 ALVVEEIKRKNVVPDIFTY----NLW--ISSCAATLNIDQVKKFLDEM-SCDSGGSDDWV 151
+V E +K P I +Y NL+ I A L+I + EM SC G +
Sbjct: 423 LVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISK------EMESC--GIKHNNK 474
Query: 152 KYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKS 211
Y L+N +I NA + E +S Q Y+ LI + +GN D+ I +
Sbjct: 475 TYSMLINGFIHLHDFANA-FAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEK 533
Query: 212 LRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 251
++ + + ++R + I+ Y + G +K + +D ++S
Sbjct: 534 MQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSG 573
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 87/188 (46%), Gaps = 4/188 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT ++ YA + KA E F ++K+S L + +Y ++ G+++ V E+
Sbjct: 615 TYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREM 674
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ + + F YN+ I A ++ + + + +M D G + Y + +N A
Sbjct: 675 SFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKED-GVPPNIHTYTSYINACCKAGD 733
Query: 166 LVNAESSTLVEAEKSITQRQWI-TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
+ AE ++E + + + TY LI +A + D+ + ++ +++ K +Y
Sbjct: 734 MQRAEK--VIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASY 791
Query: 225 ICILSSYL 232
C+++S L
Sbjct: 792 HCLVTSLL 799
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 91/204 (44%), Gaps = 4/204 (1%)
Query: 34 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 93
FE +P ++ + ++ YA A FE ++ + NA ++ ++ Y
Sbjct: 255 FERIPKPSRRE--FGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVAR 312
Query: 94 QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKY 153
+ VEE+K + + I TY++ IS A +N Q L + + S + + Y
Sbjct: 313 DMRGALSCVEEMKSEGLELTIVTYSILISG-FAKINDSQSADNLFKEAKTKLSSLNGIIY 371
Query: 154 VNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 213
N+++ + + ++ AE + E E+ Y ++ Y + N++K +++ L+
Sbjct: 372 SNIIHAHCQSGNMERAE-ELVCEMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLK 430
Query: 214 MTKQKMTSRNYICILSSYLMLGHL 237
K + +Y C+L+ Y+ +G +
Sbjct: 431 ECGFKPSIISYGCLLNLYVKIGKV 454
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 95/234 (40%), Gaps = 9/234 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+Y LL+LY KA + + ++ + N Y+ ++ ++ + + EE+
Sbjct: 440 SYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEM 499
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
R + PD YNL I + N+D+ L++M + + + ++ Y A
Sbjct: 500 LRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRA-FRPIIEGYAVAGD 558
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL-RMTKQKMTS--R 222
+ +A TL +S +TY+ LI GL K K+ + L +M+ +T
Sbjct: 559 MKSA-LDTLDLMRRSGCVPTVMTYNALI---HGLVRKHKVQRAVSVLDKMSIAGITPNEH 614
Query: 223 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
Y I+ Y G + + E + K+S D+ LL A G + A
Sbjct: 615 TYTIIMRGYAASGDIGKAFEYFTKIKESGLK-LDVYIYETLLRACCKSGRMQSA 667
>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
Length = 1048
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 97/240 (40%), Gaps = 35/240 (14%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+TAL+ ++ ++A+EL++ + QS++ N + YN ++ G++ + +
Sbjct: 248 TFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLM 307
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K P++ TYN IS +D+ K MSC+ G + D Y L++ Y
Sbjct: 308 ASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCE-GFNADIFTYNTLIHGYCQVGK 366
Query: 166 L------------------------------VNAE-SSTLVEAEKSITQRQWITYDFLII 194
L VN E S LV+ + ++I I
Sbjct: 367 LRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNI 426
Query: 195 LYAGLGNKDKIDQIWK---SLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 251
+ GL DK+++ W+ L + K +R Y ++ G +E E+I + K+
Sbjct: 427 MIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEG 486
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 57/113 (50%), Gaps = 1/113 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L+H Y A A+++F R+ +S + + YN ++ + G++EK ++VE++
Sbjct: 886 TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDL 945
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 158
++ + DI TYN+ I T + + ++ G D + Y+ +++
Sbjct: 946 QKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLT-RKGVKPDAIAYITMIS 997
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 91/210 (43%), Gaps = 10/210 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY +L++ + A+ +F+ + + + YN ++T + +VE + E+
Sbjct: 816 TYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEM 875
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ +V D FTYN I ++ +K + M D G S D V Y L++
Sbjct: 876 TYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMV-DCGVSPDIVTYNILLDCLCNNGK 934
Query: 166 LVNAESSTLVE-AEKSITQRQWITYDFLIILYAGLGNKDKIDQIW---KSLRMTKQKMTS 221
+ ++ +VE +KS ITY+ +I GL DK+ + W +SL K +
Sbjct: 935 I--EKALVMVEDLQKSEMDVDIITYNIII---QGLCRTDKLKEAWCLFRSLTRKGVKPDA 989
Query: 222 RNYICILSSYLMLGHLKEVGEIIDQWKQSA 251
YI ++S G +E ++ + K+
Sbjct: 990 IAYITMISGLCRKGLQREADKLCRRMKEDG 1019
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 3/113 (2%)
Query: 46 TYTALLH-LYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
TY L+ L +WT+ A L + VK+ + N + + ++ ++ G + + + +E
Sbjct: 746 TYNTLISGLSNSGRWTDAARLLRDMVKRK-IDPNVIFFTALIDTFVKEGNLLEARNLYKE 804
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 157
+ R++VVP++FTYN I+ + K D M G D V Y L+
Sbjct: 805 MIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMV-SKGCFPDVVTYNTLI 856
Score = 37.7 bits (86), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 34/176 (19%), Positives = 77/176 (43%), Gaps = 2/176 (1%)
Query: 63 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 122
A EL +++ L + + YN ++T G+ A ++ ++ ++++ PD+ T+ I
Sbjct: 195 ALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALID 254
Query: 123 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT 182
N+D+ ++ EM S + V Y +++N L +A+ + + A K
Sbjct: 255 VFVKQGNLDEAQELYKEMI-QSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCF 313
Query: 183 QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLK 238
+TY+ LI + D+ ++++ + Y ++ Y +G L+
Sbjct: 314 P-NVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLR 368
>gi|115466932|ref|NP_001057065.1| Os06g0199100 [Oryza sativa Japonica Group]
gi|51091829|dbj|BAD36643.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113595105|dbj|BAF18979.1| Os06g0199100 [Oryza sativa Japonica Group]
Length = 1283
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 79/186 (42%), Gaps = 2/186 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY A++ ++ ++AE +F+ + + +A+ YN ++ + G VE+V V EE+
Sbjct: 170 TYNAMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEEL 229
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ D TYN I +D DEM G + D V Y LV+
Sbjct: 230 VKAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRA-IGCTPDAVTYTVLVDSLGKMDR 288
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ A L E + + +T+ LI YA G +D ++ + + + K Y+
Sbjct: 289 ISEA-GKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYL 347
Query: 226 CILSSY 231
+L +
Sbjct: 348 VMLDVF 353
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 80/184 (43%), Gaps = 2/184 (1%)
Query: 63 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 122
A EL V+Q+ L +A+ YN +++ ++ V EE+ PD++TYN +S
Sbjct: 117 ALELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVS 176
Query: 123 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT 182
+ + E+ + G D V Y +L+ + + E E K+
Sbjct: 177 VHGRCGKAQEAELMFKEL-VEKGFQPDAVTYNSLLYAFAKEGDVERVE-RVCEELVKAGF 234
Query: 183 QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 242
++ ITY+ +I +Y +G D ++ +R + Y ++ S + + E G+
Sbjct: 235 RKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGK 294
Query: 243 IIDQ 246
++++
Sbjct: 295 VLEE 298
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 78/168 (46%), Gaps = 7/168 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L+ + + A +FE + S + YN M++++ G+ ++ L+ +E+
Sbjct: 135 TYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAELMFKEL 194
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K PD TYN + + A ++++V++ +E+ +G D + Y ++++Y
Sbjct: 195 VEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEEL-VKAGFRKDGITYNTMIHMYGKMGR 253
Query: 166 LVNAESSTLVEAEKSI-TQRQWITYDFLIILYAGLGNKDKIDQIWKSL 212
L A L + ++I +TY +L LG D+I + K L
Sbjct: 254 LDLALG--LYDEMRAIGCTPDAVTY---TVLVDSLGKMDRISEAGKVL 296
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 48/96 (50%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
E+Y LL AK E+A+ LFE ++ N +Y+ MM +Y + K ++
Sbjct: 833 ESYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNARNHSKAEHLLSA 892
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
+K + P I T ++ ++S + + D+ +K L+ +
Sbjct: 893 MKEDGIEPTIATMHILMTSYGTSGHPDEAEKVLNSL 928
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 36/183 (19%), Positives = 83/183 (45%), Gaps = 2/183 (1%)
Query: 50 LLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKN 109
LL +Y G ++ E++ + ++ L + YN ++ +Y + E+ ++ E+ ++
Sbjct: 768 LLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRPEEGFTLLYEMGKRG 827
Query: 110 VVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 169
+ P + +Y + +++ +Q +EM G + Y ++ IY A + A
Sbjct: 828 LTPKLESYKILLAASGKAKLWEQADLLFEEMRT-KGYRLNRSIYHMMMKIYRNARNHSKA 886
Query: 170 ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILS 229
E E I + T L+ Y G+ D+ +++ SL+ + ++++ Y +L
Sbjct: 887 EHLLSAMKEDGI-EPTIATMHILMTSYGTSGHPDEAEKVLNSLKSSNLEISTLPYSTVLD 945
Query: 230 SYL 232
+YL
Sbjct: 946 AYL 948
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/164 (18%), Positives = 78/164 (47%), Gaps = 7/164 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY ++H+Y + A L++ ++ + +A+ Y ++ + ++ + V+EE+
Sbjct: 240 TYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEM 299
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ P + T++ I + A + D ++ D M +SG D + Y+ +++++ +
Sbjct: 300 ADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRM-VESGVKPDRLAYLVMLDVFARSD- 357
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLI-ILYAGLGNKDKIDQI 208
E+ L+ +++ + + D L +L A L ++ D+I
Sbjct: 358 ----ETRKLMVLYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEI 397
>gi|297802950|ref|XP_002869359.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315195|gb|EFH45618.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 906
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 61/124 (49%), Gaps = 4/124 (3%)
Query: 34 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 93
F+G +S E Y LL Y K EK + +R+K+S + YN M+ +Y G
Sbjct: 763 FDGFSVSL---EAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQG 819
Query: 94 QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKY 153
+++VA V++E+K + PD+ +YN I + +++ + EM + D V Y
Sbjct: 820 WIDEVAGVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMR-GKNITPDKVTY 878
Query: 154 VNLV 157
NLV
Sbjct: 879 TNLV 882
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 46/244 (18%), Positives = 99/244 (40%), Gaps = 4/244 (1%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
+ +L +Y +K + L+ R+++S + ++ MYN ++ +++++ EE+
Sbjct: 634 FRDMLRIYQKCDLQDKLQHLYYRIQKSGIHWDQEMYNCVINCCARALPLDELSRTFEEMI 693
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
R P+ T+N+ + +V + + G D + Y ++ Y
Sbjct: 694 RYGFTPNTVTFNVLLDVYGKAKLFKKVNELF--LLAKRHGVVDVISYNTIIAAYGKNKDF 751
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 226
N SS + + Y+ L+ Y +K I K ++ + Y
Sbjct: 752 TNM-SSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNI 810
Query: 227 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 286
+++ Y G + EV ++ + K+S D+ + N L+ A+ G+ E+A + K
Sbjct: 811 MINIYGEQGWIDEVAGVLKELKESGLGP-DLCSYNTLIKAYGIGGMVEEAVGLVKEMRGK 869
Query: 287 NCAP 290
N P
Sbjct: 870 NITP 873
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 60/149 (40%), Gaps = 35/149 (23%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSN----LSFNALM-------------------- 81
T+ LL +Y AK +K ELF K+ +S+N ++
Sbjct: 703 TFNVLLDVYGKAKLFKKVNELFLLAKRHGVVDVISYNTIIAAYGKNKDFTNMSSAIKNMQ 762
Query: 82 ----------YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
YN ++ Y Q+EK +++ +K+ PD +TYN+ I+ ID
Sbjct: 763 FDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWID 822
Query: 132 QVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
+V L E+ +SG D Y L+ Y
Sbjct: 823 EVAGVLKELK-ESGLGPDLCSYNTLIKAY 850
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 50/112 (44%), Gaps = 1/112 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
Y++++ +Y + EKAEE+ +KQ + + M+ Y G++E+ V+ +
Sbjct: 283 AYSSMITIYTRLRLYEKAEEVINLMKQDRVRLKLENWLVMLNAYSQQGKMEQAESVLISM 342
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 157
+ P+I YN I+ ++ K +S D G D Y +++
Sbjct: 343 EAAGFAPNIIAYNTLITGYGKVSKMEAAKSLFHRLS-DIGLEPDETSYRSMI 393
>gi|255548349|ref|XP_002515231.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545711|gb|EEF47215.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 505
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 106/253 (41%), Gaps = 12/253 (4%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
+T+ LL +G K +E+AE FE +++ + + + YN ++ +Y ++EK VVE+
Sbjct: 211 QTFNILL---SGWKQSEEAELFFEEMRELGIKPDVVSYNSLIDVYCKDREMEKAYKVVEK 267
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
++ +++ PD+ TY I D+ + L+EM + G D Y ++ Y A
Sbjct: 268 MREEDISPDVITYTSIIGGLGLVGQPDKARDILNEMK-EYGCYPDVAAYNAVIRNYCIAK 326
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK-SLRMTKQKMTSRN 223
L +A + A K ++ F + Y + + W RM +
Sbjct: 327 RLGDASNLMDEMASKGLSPNATTYNLFFRVFYWS----NDLRNSWSLYRRMMESGCLPNT 382
Query: 224 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFD--ISACNRLLGAFSDVGLTEKANEFHM 281
C+ L H ++V + W F I + L D+G +A + +
Sbjct: 383 QSCMFLIRLFRKH-EKVEMALTLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKCFL 441
Query: 282 LLLQKNCAPTNAS 294
+++K P+N S
Sbjct: 442 QMIEKGHKPSNVS 454
>gi|147779268|emb|CAN70089.1| hypothetical protein VITISV_038171 [Vitis vinifera]
Length = 838
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 113/260 (43%), Gaps = 9/260 (3%)
Query: 36 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 95
G P SA Y A + T+KA E+FER+K+ + Y ++ LY +
Sbjct: 163 GFPPSAVV---YNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKS 219
Query: 96 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 155
V E++ + P+I T+ +++ A ++ ++ +++ ++G D Y
Sbjct: 220 YMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQ-EAGLEPDVYAYNA 278
Query: 156 LVNIYITASHLVNA-ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM 214
L+ Y A A E +L++ R +Y+ ++ Y G + +++ ++
Sbjct: 279 LMEAYSRAGFPYGAAEIFSLMQHMGCEPDRA--SYNIMVDAYGRAGLHEDAQAVFEVMKR 336
Query: 215 TKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTE 274
T ++++ +LS+Y G + + EI++Q +S D N +L + +G E
Sbjct: 337 LGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKP-DTFVLNSMLNLYGRLGQFE 395
Query: 275 KANEFHMLLLQKNCAPTNAS 294
K E + ++K P + S
Sbjct: 396 KMEEV-LTAMEKGPYPADIS 414
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 89/202 (44%), Gaps = 37/202 (18%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNL-----SFNALM------------------- 81
T+TAL++ +A EKAEE+FE+++++ L ++NALM
Sbjct: 240 TFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLM 299
Query: 82 -----------YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 130
YN M+ Y G E V E +KR + P + ++ L +S+ + +
Sbjct: 300 QHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKV 359
Query: 131 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 190
+ ++ +++M SG D +++N+Y E L EK TY+
Sbjct: 360 AKCEEIVNQMH-KSGIKPDTFVLNSMLNLYGRLGQFEKME-EVLTAMEKGPYPADISTYN 417
Query: 191 FLIILYAGLGNKDKIDQIWKSL 212
LI +Y G +++++++SL
Sbjct: 418 ILINIYGRAGFFARMEELFRSL 439
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 49/248 (19%), Positives = 85/248 (34%), Gaps = 38/248 (15%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y L+ Y +KAE + + ++ Y ++ Y + G +EK V E++
Sbjct: 101 YNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAVFAEMR 160
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
+ P YN +I + + + + M D
Sbjct: 161 KYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDR---------------------- 198
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 226
Q TY LI LY +++ +R K K +
Sbjct: 199 ---------------CQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTA 243
Query: 227 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 286
+++++ G ++ EI +Q Q A + D+ A N L+ A+S G A E L+
Sbjct: 244 LVNAFAREGLCEKAEEIFEQL-QEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHM 302
Query: 287 NCAPTNAS 294
C P AS
Sbjct: 303 GCEPDRAS 310
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 44/81 (54%)
Query: 42 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 101
T +++ LL Y+ A K EE+ ++ +S + + + N M+ LY +GQ EK+ V
Sbjct: 341 PTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEV 400
Query: 102 VEEIKRKNVVPDIFTYNLWIS 122
+ +++ DI TYN+ I+
Sbjct: 401 LTAMEKGPYPADISTYNILIN 421
>gi|356551361|ref|XP_003544044.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 688
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/225 (20%), Positives = 104/225 (46%), Gaps = 9/225 (4%)
Query: 18 IDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSF 77
+++ +K I + + F+G+ S + T+ AL+ YA EK EL +++++
Sbjct: 311 VEMYSKCQDIVAAQMAFDGV--SERDLPTWNALISGYARCNQAEKIRELHQKMRRDGFEP 368
Query: 78 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFL 137
N +N ++ Y+ Q + + E++ N+ PDI+T + +++C+ I + K+ +
Sbjct: 369 NVYTWNGIIAGYVENKQYDSAMQLFTEMQIANLRPDIYTVGIILAACSRLATIQRGKQ-V 427
Query: 138 DEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYA 197
S +G D LV++Y + I+ ++++ ++ YA
Sbjct: 428 HAYSIRAGHDSDVHIGAALVDMYAKC-----GDVKHCYRVYNMISNPNLVSHNAMLTAYA 482
Query: 198 GLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 242
G+ ++ +++ + +K + ++ +LSS + G L E+G
Sbjct: 483 MHGHGEEGIALFRRMLASKVRPDHVTFLAVLSSCVHAGSL-EIGH 526
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 108/242 (44%), Gaps = 7/242 (2%)
Query: 39 LSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV 98
S K++ +Y A++ Y KA+ELF+R++Q + + + +N M++ Y+ ++
Sbjct: 194 FSRKSAASYNAMIAGYWENGNLFKAKELFDRMEQEGVQKDRISWNSMISGYVDGSLFDEA 253
Query: 99 ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 158
+ ++ ++ + PD FT ++ CA +I + K+ ++ G + + LV
Sbjct: 254 YSLFRDLLKEGIEPDSFTLGSVLAGCADMASIRRGKE-AHSLAIVRGLQSNSIVGGALVE 312
Query: 159 IYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQK 218
+Y +V A+ A +++R T++ LI YA +KI ++ + +R +
Sbjct: 313 MYSKCQDIVAAQM-----AFDGVSERDLPTWNALISGYARCNQAEKIRELHQKMRRDGFE 367
Query: 219 MTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 278
+ I++ Y+ ++ + Q A DI +L A S + ++ +
Sbjct: 368 PNVYTWNGIIAGYVENKQYDSAMQLFTEM-QIANLRPDIYTVGIILAACSRLATIQRGKQ 426
Query: 279 FH 280
H
Sbjct: 427 VH 428
>gi|357487221|ref|XP_003613898.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515233|gb|AES96856.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 807
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 64/127 (50%), Gaps = 1/127 (0%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
S TY L+ +Y A + E+F ++ + ++ + +N M+ LY + G++ +V+L+++
Sbjct: 271 SHTYNTLIDIYGKAGQIQAVYEIFAKMIKQGVAPTTVTFNTMIHLYGNHGRIREVSLLLQ 330
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
++ PD TYN+ IS NI K+L +M ++ D V Y L+ Y T
Sbjct: 331 RMEELRCPPDTRTYNILISVLVKHNNIKLAAKYLMKMK-EAFLEPDLVSYRTLLYAYSTR 389
Query: 164 SHLVNAE 170
+ AE
Sbjct: 390 KMVQEAE 396
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 119/238 (50%), Gaps = 11/238 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+Y++L+H+ A A A+ +++++ L + ++Y +++ ++ + Q++ + E+
Sbjct: 516 SYSSLIHILASADKPHIAKPYLNKMQEAGLVSDCILYCAVISSFVKLSQLDMAEELYIEM 575
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
V PD Y++ I++ A N+ + +LD M ++G + Y +L+ +Y +
Sbjct: 576 IGHTVKPDAIIYSVLINAFADVGNVIKATGYLDRMR-NAGFVGNQAIYNSLMKLYTKIGY 634
Query: 166 LVNAESS-TLVEAEKSITQRQWI-TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR- 222
L A+ + TL++ S+ Q + + + +I LY ++ +I++SL+ K + +
Sbjct: 635 LKEAQQTYTLLQ---SLDQAPSVFSSNCMIDLYTERLMVEQAKEIFESLK--KNNIANEF 689
Query: 223 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFS-DVGLTEKANEF 279
+Y +L Y +G L E +I Q ++ D+ + N +LG +S D L E F
Sbjct: 690 SYAMMLCMYKKIGRLDEAFQIAKQMRKQGLLT-DLLSYNNVLGLYSMDRRLREAKETF 746
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 32/167 (19%), Positives = 73/167 (43%), Gaps = 3/167 (1%)
Query: 2 VTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLS--AKTSETYTALLHLYAGAKW 59
V+H L+ Y T ID+ K I + F + A T+ T+ ++HLY
Sbjct: 262 VSHVNVCLNSHTYNTLIDIYGKAGQIQAVYEIFAKMIKQGVAPTTVTFNTMIHLYGNHGR 321
Query: 60 TEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNL 119
+ L +R+++ + YN ++++ + ++ A + ++K + PD+ +Y
Sbjct: 322 IREVSLLLQRMEELRCPPDTRTYNILISVLVKHNNIKLAAKYLMKMKEAFLEPDLVSYRT 381
Query: 120 WISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
+ + + + + ++ + EM + G D L +Y+ ++ L
Sbjct: 382 LLYAYSTRKMVQEAEELVREMD-ERGLKIDEFTQAALTRMYVESNML 427
Score = 37.4 bits (85), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 35/179 (19%), Positives = 74/179 (41%), Gaps = 32/179 (17%)
Query: 46 TYTALLHLYAGAKWTEKAEELFER------------------------VKQSNLSFNALM 81
T ++ LY A+ +KAEE F + V N+ N+
Sbjct: 214 TMGVVVQLYKRAREFQKAEEFFRKWSRGEPLVIAIDHNTVDVRHVCNEVSHVNVCLNSHT 273
Query: 82 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFL---D 138
YN ++ +Y GQ++ V + ++ ++ V P T+N I I +V L +
Sbjct: 274 YNTLIDIYGKAGQIQAVYEIFAKMIKQGVAPTTVTFNTMIHLYGNHGRIREVSLLLQRME 333
Query: 139 EMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYA 197
E+ C D Y L+++ + ++ + + L++ +++ + ++Y L+ Y+
Sbjct: 334 ELRC----PPDTRTYNILISVLVKHNN-IKLAAKYLMKMKEAFLEPDLVSYRTLLYAYS 387
>gi|357448559|ref|XP_003594555.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483603|gb|AES64806.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 5/162 (3%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
+ Y ++L + +A +L R + ++ + +MYN + T + QV + + E+
Sbjct: 396 DAYMSMLESLCSSGKIAEAIDLLNRFHEKCITTDTIMYNTVFTALGRLKQVSHIHDLYEK 455
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+K+ PDIFTYN+ ISS +D K +E+ +S D + Y +L+N + +
Sbjct: 456 MKQDGPPPDIFTYNILISSYGRAGRVDSAVKIFEELE-NSNCQPDVISYNSLINC-LGKN 513
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKID 206
V+ E ++ +TY LI + G DK++
Sbjct: 514 GDVDEAHMRFKEMQEKGLNPDVVTYSTLIECF---GKTDKVE 552
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 1/108 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L+ Y A + A ++FE ++ SN + + YN ++ G V++ + +E+
Sbjct: 467 TYNILISSYGRAGRVDSAVKIFEELENSNCQPDVISYNSLINCLGKNGDVDEAHMRFKEM 526
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKY 153
+ K + PD+ TY+ I T ++ DEM + G S + V Y
Sbjct: 527 QEKGLNPDVVTYSTLIECFGKTDKVEMACSLFDEMIAE-GCSPNLVTY 573
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 43/212 (20%), Positives = 86/212 (40%), Gaps = 6/212 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+Y LL Y + +KA ++ + + S + +N ++ +V+K V E++
Sbjct: 190 SYKCLLQGYLRLRDCDKAFGVYLDMLRCGYSLDIFAFNMLLDALAKDQKVDKAYKVFEDM 249
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
KR++ PD FTY + I D+ M + G + + + Y ++ +
Sbjct: 250 KRRHCEPDTFTYTIMIRMTGKAGKTDESLALFQAM-LEKGFTLNLIAYNTMIEA-LAKGR 307
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ + + ++ Q TY L+ + G +K+D I + M+K+ M + Y
Sbjct: 308 MADKAVLLFSKMVENGCQPNEFTYSVLLNVLVAEGQLNKLDNI---VEMSKKYMNKQIYA 364
Query: 226 CILSSYLMLGHLKEVGEII-DQWKQSATSDFD 256
+ + LGH E + + W D D
Sbjct: 365 YFVRTLSKLGHSSEAHRLFCNMWNVHDKGDKD 396
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 104/254 (40%), Gaps = 24/254 (9%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT ++ + A T+++ LF+ + + + N + YN M+ +K L+ ++
Sbjct: 260 TYTIMIRMTGKAGKTDESLALFQAMLEKGFTLNLIAYNTMIEALAKGRMADKAVLLFSKM 319
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
P+ FTY++ ++ A ++++ + EMS KY+N IY ++
Sbjct: 320 VENGCQPNEFTYSVLLNVLVAEGQLNKLDNIV-EMS---------KKYMN-KQIY---AY 365
Query: 166 LVNAESSTLVEAE-KSITQRQWITY-----DFLIILYAGLGNKDKIDQIWKSLRMTKQKM 219
V S +E + W + D + + L + KI + L +K
Sbjct: 366 FVRTLSKLGHSSEAHRLFCNMWNVHDKGDKDAYMSMLESLCSSGKIAEAIDLLNRFHEKC 425
Query: 220 TSRNYICILSSYLMLGHLKEVGEIIDQW---KQSATSDFDISACNRLLGAFSDVGLTEKA 276
+ + I + + LG LK+V I D + KQ DI N L+ ++ G + A
Sbjct: 426 ITTDTIMYNTVFTALGRLKQVSHIHDLYEKMKQDGPPP-DIFTYNILISSYGRAGRVDSA 484
Query: 277 NEFHMLLLQKNCAP 290
+ L NC P
Sbjct: 485 VKIFEELENSNCQP 498
>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g64583, mitochondrial; Flags: Precursor
gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
Length = 512
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 97/240 (40%), Gaps = 35/240 (14%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+TAL+ ++ ++A+EL++ + QS++ N + YN ++ G++ + +
Sbjct: 248 TFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLM 307
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K P++ TYN IS +D+ K MSC+ G + D Y L++ Y
Sbjct: 308 ASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCE-GFNADIFTYNTLIHGYCQVGK 366
Query: 166 L------------------------------VNAE-SSTLVEAEKSITQRQWITYDFLII 194
L VN E S LV+ + ++I I
Sbjct: 367 LRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNI 426
Query: 195 LYAGLGNKDKIDQIWK---SLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 251
+ GL DK+++ W+ L + K +R Y ++ G +E E+I + K+
Sbjct: 427 MIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEG 486
Score = 37.7 bits (86), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 34/176 (19%), Positives = 77/176 (43%), Gaps = 2/176 (1%)
Query: 63 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 122
A EL +++ L + + YN ++T G+ A ++ ++ ++++ PD+ T+ I
Sbjct: 195 ALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALID 254
Query: 123 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT 182
N+D+ ++ EM S + V Y +++N L +A+ + + A K
Sbjct: 255 VFVKQGNLDEAQELYKEM-IQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCF 313
Query: 183 QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLK 238
+TY+ LI + D+ ++++ + Y ++ Y +G L+
Sbjct: 314 P-NVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLR 368
>gi|357166784|ref|XP_003580849.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Brachypodium distachyon]
Length = 904
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 90/207 (43%), Gaps = 2/207 (0%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y+ ++H + + ++AEEL +++ + Y+ MM Y + +K +V E +K
Sbjct: 377 YSNIIHAHCQSGNMDRAEELVREMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLK 436
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
P I +Y I+ + + EM G + Y L++ +I
Sbjct: 437 ECCFTPSIISYGCLINLYIKIGKVTKAIAISKEME-SYGIKHNNKTYSMLISGFIHLHDF 495
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 226
NA S E KS Q Y+ LI + +GN D+ +I + ++ + + ++R +
Sbjct: 496 ANA-FSIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRP 554
Query: 227 ILSSYLMLGHLKEVGEIIDQWKQSATS 253
I+ + + G +K I+D ++S +
Sbjct: 555 IIEGFAVAGDMKRALNILDLMRRSGCA 581
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 82/188 (43%), Gaps = 4/188 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT ++ YA KA E F ++K+ L + +Y ++ G+++ V E+
Sbjct: 621 TYTIIMRGYAANGDIGKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREM 680
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ + + F YN+ I A ++ + + +M D G + Y + +N A
Sbjct: 681 STQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKED-GVPPNIHTYTSYINACCKAGD 739
Query: 166 LVNAESSTLVEAEKSITQRQWI-TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
+ A+ ++E + + + TY LI +A D+ + ++ +++ K Y
Sbjct: 740 MQRAQK--VIEEMADVGLKPNLKTYTTLIKGWAKASLPDRALKSFEEMKLAGLKPDEAAY 797
Query: 225 ICILSSYL 232
C+++S L
Sbjct: 798 HCLVTSLL 805
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 56/293 (19%), Positives = 112/293 (38%), Gaps = 38/293 (12%)
Query: 34 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 93
FE +P ++ + ++ YA A FE ++ + NA ++ ++ Y
Sbjct: 261 FERIPKPSR--REFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVAR 318
Query: 94 QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKY 153
+ V VEE+K + + I TY++ I+ A + E G + + Y
Sbjct: 319 DMRGVLSCVEEMKAEGIELTIVTYSIIIAGFAKINDAQSADNLFKEAKAKLGDLNGII-Y 377
Query: 154 VNLVNIYITASHLVNAE-----------------------SSTLVEAEKS---ITQR--- 184
N+++ + + ++ AE T+++ EK + +R
Sbjct: 378 SNIIHAHCQSGNMDRAEELVREMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKE 437
Query: 185 -----QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 239
I+Y LI LY +G K I K + K ++ Y ++S ++ L
Sbjct: 438 CCFTPSIISYGCLINLYIKIGKVTKAIAISKEMESYGIKHNNKTYSMLISGFIHLHDFAN 497
Query: 240 VGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 292
I ++ +S D + N L+ AF +G ++A + ++ P+N
Sbjct: 498 AFSIFEEMLKSGLQP-DRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSN 549
>gi|115529197|dbj|BAF34331.1| pentatricopeptide repeat protein [Physcomitrella patens]
Length = 728
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 93/219 (42%), Gaps = 9/219 (4%)
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
E+AE + + V++S +S + YN M+T Y +K A +VE+++ +++VPD TY+
Sbjct: 153 EEAERIMDTVEESGMSLGLVGYNSMITAYGKACLYDKAARLVEKMREEDLVPDSITYSCM 212
Query: 121 ISSCAATLNIDQVKKFLDEM---SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA 177
I +C + + + EM S+ + L++ Y A V + E
Sbjct: 213 IGACGRVGKLKEALSWFAEMKRLEIKPASSN----FNTLISPYGKAKD-VEGIVRVITEM 267
Query: 178 EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHL 237
+K + W T D + Y G + +I LR + +Y +L YL
Sbjct: 268 KKYGCKPDWQTLDAAVRAYDRAGLIKDVTEILNLLRDAGWVEETGSYGTLLHVYLKCNLP 327
Query: 238 KEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
KE I +++ + + C L+ F D + + A
Sbjct: 328 KEALRIFLAMRKAGMAPKEY-MCRSLICTFRDAEMFDGA 365
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 59/125 (47%), Gaps = 1/125 (0%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
E Y ++L Y A EK ++ R++ S + + YN ++ Y + ++ +
Sbjct: 591 EAYNSILDAYGKAGQMEKVSDVLARMENSGMRMDLASYNILINTYGKNYMIAEMETLFRT 650
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
++ + VVPD +TYN I + D+ + M D+G S D V Y+ LV+ + A
Sbjct: 651 MQEEGVVPDRWTYNTIIRTYGFADYPDRAVYWFKAMQ-DAGISPDRVTYMILVSTFERAG 709
Query: 165 HLVNA 169
++ A
Sbjct: 710 NIDEA 714
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 79/184 (42%), Gaps = 12/184 (6%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y +++ Y A +KA L E++++ +L +++ Y+ M+ VG++++ E+K
Sbjct: 174 YNSMITAYGKACLYDKAARLVEKMREEDLVPDSITYSCMIGACGRVGKLKEALSWFAEMK 233
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
R + P +N IS +++ + + + EM G DW V Y A +
Sbjct: 234 RLEIKPASSNFNTLISPYGKAKDVEGIVRVITEMK-KYGCKPDWQTLDAAVRAYDRAGLI 292
Query: 167 VNAESSTLVEAEKSITQRQWI----TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 222
+ + E + W+ +Y L+ +Y + +I+ L M K M +
Sbjct: 293 KD-----VTEILNLLRDAGWVEETGSYGTLLHVYLKCNLPKEALRIF--LAMRKAGMAPK 345
Query: 223 NYIC 226
Y+C
Sbjct: 346 EYMC 349
Score = 40.4 bits (93), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 91/212 (42%), Gaps = 9/212 (4%)
Query: 14 YATRIDLMTKVFGIHS-GERYFEGLPLSAKTSE----TYTALLHLYAGAKWTEKAEELFE 68
Y ++M ++G ER + L L+ + +++ L+H YA + E
Sbjct: 520 YNITFNVMIDLYGKAGMPERAHKALKLAQQFGSADKISFSTLVHAYAKKQDFPNMEAALW 579
Query: 69 RVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATL 128
++ + + YN ++ Y GQ+EKV+ V+ ++ + D+ +YN+ I++
Sbjct: 580 EMQNAGYGSSLEAYNSILDAYGKAGQMEKVSDVLARMENSGMRMDLASYNILINTYGKNY 639
Query: 129 NIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWIT 188
I +++ M + D W Y ++ Y A + A + I+ + +T
Sbjct: 640 MIAEMETLFRTMQEEGVVPDRWT-YNTIIRTYGFADYPDRAVYWFKAMQDAGISPDR-VT 697
Query: 189 YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 220
Y L+ + GN D+ + W LRM++ T
Sbjct: 698 YMILVSTFERAGNIDEAAR-W-CLRMSQAGYT 727
Score = 38.1 bits (87), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 40/80 (50%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
E+ ++++Y ++AE LF ++ S + YN M+ +YM E V +
Sbjct: 382 ESSCTMIYVYGMNGDVKEAEGLFHSLRSSVKRLDIFAYNVMINVYMRCDMPEGAIKVYKL 441
Query: 105 IKRKNVVPDIFTYNLWISSC 124
++ +++PD +TY+ + C
Sbjct: 442 MEEDHLLPDAYTYHSMLRMC 461
>gi|242092154|ref|XP_002436567.1| hypothetical protein SORBIDRAFT_10g004910 [Sorghum bicolor]
gi|241914790|gb|EER87934.1| hypothetical protein SORBIDRAFT_10g004910 [Sorghum bicolor]
Length = 492
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 107/247 (43%), Gaps = 8/247 (3%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y L+ + K EKA ELF+ + + N Y +++ Y G+ + +++ +K
Sbjct: 144 YIKLITMLGKCKKPEKAHELFQAMIDEGCAPNLESYTALVSAYSRSGRFHEAFNLLDRMK 203
Query: 107 -RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
PD+ TY++ I SC + ++VK L +M+ +G + V Y L++ Y A
Sbjct: 204 DTPGCQPDVKTYSILIKSCLHAYDFEKVKSLLTDMA-RAGIRPNTVTYNTLIDAYGKARR 262
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
ES+ L ++ W T + + + G + ++ ++ + + + Y
Sbjct: 263 FPEMESTLLKMLSQNCKPDIW-TMNSTLRAFGSSGQIETMESCYEKFQASGIVPNIKTYN 321
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL-- 283
+L SY +++G ++ ++ Q + I N ++ AF G E+ L+
Sbjct: 322 ILLDSYGKAKMYEKMGAVM-EYMQKYYYSWTIVTYNVVIDAFGRAGDLEQMEYIFRLMKS 380
Query: 284 --LQKNC 288
++ NC
Sbjct: 381 ERIKPNC 387
Score = 40.4 bits (93), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 46/253 (18%), Positives = 111/253 (43%), Gaps = 3/253 (1%)
Query: 38 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 97
P +TY+ L+ A EK + L + ++ + N + YN ++ Y + +
Sbjct: 206 PGCQPDVKTYSILIKSCLHAYDFEKVKSLLTDMARAGIRPNTVTYNTLIDAYGKARRFPE 265
Query: 98 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 157
+ + ++ +N PDI+T N + + ++ I+ ++ ++ SG + Y L+
Sbjct: 266 MESTLLKMLSQNCKPDIWTMNSTLRAFGSSGQIETMESCYEKFQA-SGIVPNIKTYNILL 324
Query: 158 NIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 217
+ Y A + + + +K +TY+ +I + G+ ++++ I++ ++ +
Sbjct: 325 DSYGKAK-MYEKMGAVMEYMQKYYYSWTIVTYNVVIDAFGRAGDLEQMEYIFRLMKSERI 383
Query: 218 KMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 277
K ++ +Y G +K++ ++ + S + DI N L+ A+ VG +
Sbjct: 384 KPNCVTLCSVVRAYGRAGEVKKIKTVLRIVENSDIT-LDIVFFNCLVDAYGRVGCLAEMW 442
Query: 278 EFHMLLLQKNCAP 290
+ L+ + C P
Sbjct: 443 DILDLMKEHRCKP 455
>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 568
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/294 (19%), Positives = 127/294 (43%), Gaps = 7/294 (2%)
Query: 1 MVTHKEFVLSDSD--YATRIDLMTKVFGIHSG-ERYFEGLPLSAKTSE-TYTALLHLYAG 56
+V +EF S + Y T ID K I + +FE +E TYT L+H
Sbjct: 186 LVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFK 245
Query: 57 AKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFT 116
++ E++E++++ + N YN +M + G+ + + +E++ + V +I T
Sbjct: 246 NGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVT 305
Query: 117 YNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVE 176
YN I + ++ K +D+M D G + + + Y L++ + L A S
Sbjct: 306 YNTLIGGLCREMKANEANKVMDQMKSD-GINPNLITYNTLIDGFCGVGKLGKALSLCRDL 364
Query: 177 AEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGH 236
+ ++ +TY+ L+ + G+ ++ K + K + Y ++ ++ + +
Sbjct: 365 KSRGLSP-SLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDN 423
Query: 237 LKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
+++ ++ ++ + D+ + L+ F G +A+ L++ K P
Sbjct: 424 MEKAIQLRSPMEELGLTP-DVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEP 476
Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 38/194 (19%), Positives = 85/194 (43%), Gaps = 7/194 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L+ +A ++ +++K ++ N + YN ++ + VG++ K + ++
Sbjct: 305 TYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDL 364
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K + + P + TYN+ +S + K + EM + G + Y L++ + +
Sbjct: 365 KSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEME-ERGIKPSKITYTILIDTFARMDN 423
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ A E +T TY LI + G ++ +++K M +K+
Sbjct: 424 MEKAIQLRSPMEELGLTPDVH-TYSVLIHGFCIKGQMNEASRLFK--LMVAKKLEPNK-- 478
Query: 226 CILSSYLMLGHLKE 239
++ + ++LG+ KE
Sbjct: 479 -VIYNTMVLGYCKE 491
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 4/109 (3%)
Query: 13 DYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQ 72
D R+D M K + S E L L+ TY+ L+H + +A LF+ +
Sbjct: 416 DTFARMDNMEKAIQLRSP---MEELGLTPDV-HTYSVLIHGFCIKGQMNEASRLFKLMVA 471
Query: 73 SNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 121
L N ++YN M+ Y G + + E++ K + P++ +Y I
Sbjct: 472 KKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMI 520
>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1113
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/206 (19%), Positives = 89/206 (43%), Gaps = 2/206 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+Y L+HL + +A E++ R+ L + ++ +M E V ++EE+
Sbjct: 196 SYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEM 255
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ + P+I+TY + I ID+ + + M D G D V Y L++ TA
Sbjct: 256 ESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRME-DDGCGPDVVTYTVLIDALCTAGK 314
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
L +A V+ + S + +TY ++ ++ G+ ++ + W + +
Sbjct: 315 LDDA-MELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFT 373
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSA 251
++++ G++ E ++D ++
Sbjct: 374 ILVNALCKAGNIDEAFHLLDVMRKQG 399
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 102/247 (41%), Gaps = 7/247 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT L+ A + A ELF ++K S+ + + Y M+ + G + +V E+
Sbjct: 301 TYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEM 360
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ PD+ T+ + +++ NID+ LD M G + Y L++ + +
Sbjct: 361 EADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMR-KQGVLPNLHTYNTLISGLLRVNR 419
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
L +A E TY I Y G DK + ++ +++ + +
Sbjct: 420 LDDA-LDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKI--RGIAPNIVA 476
Query: 226 CILSSYLM--LGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 283
C S Y + +G L+E I ++ K + + D N ++ +S G ++A E +
Sbjct: 477 CNASLYSLAEMGRLREAKVIFNRLKSNGLAP-DSVTYNMMMKCYSKAGQVDEAIELLSDM 535
Query: 284 LQKNCAP 290
+ C P
Sbjct: 536 SENQCEP 542
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 52/96 (54%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
++YT+L+ A + A FE++KQ+ L +++ YN M+ ++E+ + +E
Sbjct: 966 KSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDE 1025
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
++ + + PD+FTYN I + ++Q K +E+
Sbjct: 1026 MQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEEL 1061
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 75/166 (45%), Gaps = 5/166 (3%)
Query: 42 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 101
T+ TY + Y + ++KA E FE++K ++ N + N + +G++ + ++
Sbjct: 437 PTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVI 496
Query: 102 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 161
+K + PD TYN+ + + +D+ + L +MS ++ D + +L+N
Sbjct: 497 FNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMS-ENQCEPDIIVINSLINTLY 555
Query: 162 TASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQ 207
A V+ + +TY+ LI AGLG + ++ +
Sbjct: 556 KAGR-VDEAWKMFCRLKDMKLAPTVVTYNTLI---AGLGKEGQVQR 597
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/196 (19%), Positives = 81/196 (41%), Gaps = 2/196 (1%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
+ T TY LL + E+A+ELFE + N +YN ++ + G V
Sbjct: 892 SPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACE 951
Query: 101 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
+ + + R+ + PD+ +Y + +D + +++ +G D + Y NL+
Sbjct: 952 LFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLK-QTGLYLDSIAY-NLMIDG 1009
Query: 161 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 220
+ SH + + E + TY+ LI+ G ++ ++++ L+ +
Sbjct: 1010 LGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPN 1069
Query: 221 SRNYICILSSYLMLGH 236
Y ++ Y M G+
Sbjct: 1070 VFTYNALIRGYSMSGN 1085
Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 60/298 (20%), Positives = 120/298 (40%), Gaps = 45/298 (15%)
Query: 34 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 93
EGL S KT ++AL+ + TE + L E ++ L N Y + + G
Sbjct: 222 LEGLKPSLKT---FSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAG 278
Query: 94 QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKY 153
++++ +++ ++ PD+ TY + I + +D + +M S D V Y
Sbjct: 279 RIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASS-HKPDRVTY 337
Query: 154 VNLVNIY-------------------------ITASHLVNA--ESSTLVEAEK--SITQR 184
+ +++ + IT + LVNA ++ + EA + ++
Sbjct: 338 ITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRK 397
Query: 185 QWI-----TYDFLIILYAGLGNKDKID---QIWKSLRMTKQKMTSRNYICILSSYLMLGH 236
Q + TY+ LI +GL +++D ++ ++ T+ YI + Y G
Sbjct: 398 QGVLPNLHTYNTLI---SGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGR 454
Query: 237 LKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
+ E ++ K + +I ACN L + +++G +A L AP + +
Sbjct: 455 SDKALETFEKMKIRGIAP-NIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVT 511
Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 69/166 (41%), Gaps = 2/166 (1%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y L++ + A ELF+R+ + + + Y ++ G+V+ E++K
Sbjct: 933 YNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLK 992
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
+ + D YNL I + I++ DEM G + D Y +L+ + + + +
Sbjct: 993 QTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQ-SRGINPDLFTYNSLI-LNLGVAGM 1050
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 212
V E + + TY+ LI Y+ GN D ++K +
Sbjct: 1051 VEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRM 1096
>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Cucumis sativus]
Length = 942
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/236 (19%), Positives = 103/236 (43%), Gaps = 3/236 (1%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 102
+ + +L ++A T+ A +F+ + + + N +++ + G+ K LV
Sbjct: 185 SPTVFDMILKVFAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKALLVY 244
Query: 103 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 162
E++ ++PDIF+Y + +++ +D+ F+ EM S + V Y +L++ Y++
Sbjct: 245 EQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEME-RSCCEPNVVTYNSLIDGYVS 303
Query: 163 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 222
+ A+ + +EK I + TY LI Y G ++ +++ + +
Sbjct: 304 LGDVCGAKKVLALMSEKGIPENSR-TYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEH 362
Query: 223 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 278
Y ++ +Y G + + I D + + CN L+ + +G KA E
Sbjct: 363 VYGVLIHAYCTAGRVDDALRIRDAMLKVGLK-MNTVICNSLINGYCKLGHVNKAAE 417
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 72/166 (43%), Gaps = 2/166 (1%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
Y L+H Y A + A + + + + L N ++ N ++ Y +G V K A V+
Sbjct: 362 HVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVS 421
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+K N+ PD + YN + + + K DEM + G + V Y L+
Sbjct: 422 MKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMH-NKGVNFTVVTYNTLLKNLFHVG 480
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK 210
H+ +A + ++ + + +TY L+ + +G D+ IWK
Sbjct: 481 HVEHALHIWNLMHKRGVAPNE-VTYCTLLDAFFKVGTFDRAMMIWK 525
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 103/249 (41%), Gaps = 3/249 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+YT +++ Y ++A + +++S N + YN ++ Y+S+G V V+ +
Sbjct: 258 SYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALM 317
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K + + TY L I ++Q +K + M + D+ V Y L++ Y TA
Sbjct: 318 SEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHV-YGVLIHAYCTAGR 376
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ +A + + I + LI Y LG+ +K ++ S++ K S Y
Sbjct: 377 VDDALRIRDAMLKVGLKMNTVIC-NSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYN 435
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 285
+L + + ++ D+ +F + N LL VG E A L+ +
Sbjct: 436 TLLDGFCKQEDFIKAFKLCDEMHNKGV-NFTVVTYNTLLKNLFHVGHVEHALHIWNLMHK 494
Query: 286 KNCAPTNAS 294
+ AP +
Sbjct: 495 RGVAPNEVT 503
>gi|302757495|ref|XP_002962171.1| hypothetical protein SELMODRAFT_77736 [Selaginella moellendorffii]
gi|300170830|gb|EFJ37431.1| hypothetical protein SELMODRAFT_77736 [Selaginella moellendorffii]
Length = 731
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 68/130 (52%), Gaps = 2/130 (1%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQ-SNLSFNALMYNEMMTLYMSVGQVEKVALV 101
T+ T+ A++H+Y A T +AE L ++KQ + + YN ++ +Y+ ++E V+
Sbjct: 263 TTVTFNAMIHVYGKAGRTREAELLVTKMKQRKDCCPDVATYNSLIEMYVKNDKLELVSGC 322
Query: 102 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 161
+E ++ V PD T+ IS+ AA + + + + EM SG D Y ++ +Y+
Sbjct: 323 LERMRDSGVSPDQVTFRTLISAYAANNVVWKAEALVQEME-GSGFFIDQAMYTVMIAMYV 381
Query: 162 TASHLVNAES 171
A + AES
Sbjct: 382 RARDVSKAES 391
>gi|356518050|ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 105/247 (42%), Gaps = 38/247 (15%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
TY+ L++ + + +++E +K+S + NA YN +++ Y + G V+K V
Sbjct: 228 PHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFA 287
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
E++ K + + TYN+ I + + KKF + VK V+ VN
Sbjct: 288 EMREKGIACGVMTYNILIGG------LCRGKKF-----------GEAVKLVHKVN----- 325
Query: 164 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 223
K +TY+ LI + +G D +++ L+ + T
Sbjct: 326 ---------------KVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVT 370
Query: 224 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 283
Y +++ Y + +L +++ + ++ + ++ L+ AF+ + TEKA E H L+
Sbjct: 371 YNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTY-TILIDAFARLNYTEKACEMHSLM 429
Query: 284 LQKNCAP 290
+ P
Sbjct: 430 EKSGLVP 436
>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats [Arabidopsis thaliana]
gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 632
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 105/255 (41%), Gaps = 47/255 (18%)
Query: 6 EFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--------TYTALLHLYAGA 57
E ++S + + T + G +R EG+ L + S+ TYT L+H + A
Sbjct: 387 ELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQA 446
Query: 58 KWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTY 117
+ + A+ +F+++ + N L YN ++ G++ K +V E ++R + PDI+TY
Sbjct: 447 RDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTY 506
Query: 118 NLWISSCAATLNIDQVKKFLDEMSCDSGGSDD-WVKYVNLVNIYITASHLVNAESSTLVE 176
N+ I E C +G +D W + NL
Sbjct: 507 NIMI-----------------EGMCKAGKVEDGWELFCNL-------------------- 529
Query: 177 AEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGH 236
+ K ++ I Y+ +I + G+K++ D + K ++ S Y ++ + L G
Sbjct: 530 SLKGVSP-NVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGD 588
Query: 237 LKEVGEIIDQWKQSA 251
+ E+I + +
Sbjct: 589 REASAELIKEMRSCG 603
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 47/250 (18%), Positives = 104/250 (41%), Gaps = 13/250 (5%)
Query: 46 TYTALLHLYAG-AKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
TY++L+ +W++ A L + + ++ N + ++ ++ ++ G++ + + +E
Sbjct: 295 TYSSLISCLCNYGRWSD-ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 353
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+ ++++ PDIFTY+ I+ +D+ K E+ + V Y L+ + A
Sbjct: 354 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF-ELMISKDCFPNVVTYSTLIKGFCKAK 412
Query: 165 HLVNAESSTLVEAEKSITQR----QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 220
+ +E + ++QR +TY LI + + D ++K +
Sbjct: 413 RVEEG-----MELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPN 467
Query: 221 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 280
Y +L G L + ++ ++ Q +T + DI N ++ G E E
Sbjct: 468 ILTYNILLDGLCKNGKLAK-AMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELF 526
Query: 281 MLLLQKNCAP 290
L K +P
Sbjct: 527 CNLSLKGVSP 536
Score = 37.7 bits (86), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 52/251 (20%), Positives = 103/251 (41%), Gaps = 15/251 (5%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERV-----KQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
T ++LL+ Y +K A L +++ K +F L++ L++ E VAL
Sbjct: 155 TLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHG----LFLHNKASEAVAL 210
Query: 101 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSD-DWVKYVNLVNI 159
V + ++R PD+ TY ++ +ID L +M + G + D V Y +++
Sbjct: 211 VDQMVQR-GCQPDLVTYGTVVNGLCKRGDIDLALSLLKKM--EKGKIEADVVIYNTIIDG 267
Query: 160 YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 219
H+ +A + E + + TY LI G ++ + K
Sbjct: 268 LCKYKHMDDA-LNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINP 326
Query: 220 TSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 279
+ ++ +++ G L E ++ D+ + + D DI + L+ F ++A
Sbjct: 327 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI-DPDIFTYSSLINGFCMHDRLDEAKHM 385
Query: 280 HMLLLQKNCAP 290
L++ K+C P
Sbjct: 386 FELMISKDCFP 396
>gi|359489321|ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 889
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 102/220 (46%), Gaps = 18/220 (8%)
Query: 42 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 101
T T+ +++ + +A +LF+ +K+ S NA+MYN +M Y+ + ++++ ++
Sbjct: 334 PTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANML 393
Query: 102 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 161
EE+++K + PD T+N+ +S + + L ++S D +L +I +
Sbjct: 394 YEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDR-----SLFDISV 448
Query: 162 T----ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 217
+ A L A + EK ++ I ++ +I Y+ G +DK + +K M
Sbjct: 449 SGLCWAGRLDEAMEFLMDMLEKGLSP-SIIAFNSVIAAYSQAGLEDKAFEAYK--LMVHF 505
Query: 218 KMTSRNYICILSSYLML----GHLKEVGEIIDQWKQSATS 253
+T C SS LM G L+E E+I Q + S
Sbjct: 506 GLTPSPSTC--SSLLMGLSINGRLQEATELIGQMIEKGLS 543
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 63/128 (49%), Gaps = 5/128 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
++A + + E+A +F + + L N YN ++ + G++ + AL +E++
Sbjct: 583 AFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNE-ALKLEKV 641
Query: 106 KR-KNVVPDIFTYNLWISS-CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
R + ++PDIFT N+ I C + F+D +G S D + Y L+N Y A
Sbjct: 642 MRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQ--TGLSPDIITYNTLINGYCKA 699
Query: 164 SHLVNAES 171
+VNA++
Sbjct: 700 FDMVNADN 707
Score = 44.7 bits (104), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 47/249 (18%), Positives = 100/249 (40%), Gaps = 3/249 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T++ ++ + E L + + + NA YN ++ G+ +
Sbjct: 268 TFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLM 327
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ P + T+N I++ N+ + +K D + + G S + + Y L+N Y+
Sbjct: 328 IERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLK-EMGFSPNAIMYNTLMNGYVKMRE 386
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
++ + E K IT++ L+ + G ++ D++ K + + +
Sbjct: 387 -IDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFD 445
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 285
+S G L E E + + S I A N ++ A+S GL +KA E + L++
Sbjct: 446 ISVSGLCWAGRLDEAMEFLMDMLEKGLSP-SIIAFNSVIAAYSQAGLEDKAFEAYKLMVH 504
Query: 286 KNCAPTNAS 294
P+ ++
Sbjct: 505 FGLTPSPST 513
>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/203 (19%), Positives = 92/203 (45%), Gaps = 3/203 (1%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
+T +A +H ++A ++F +K+ L + Y+ +++ + G+VEK + +E
Sbjct: 326 QTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDE 385
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+ K + P+IF YN + + +I + +K D M + G D V Y +++ Y +
Sbjct: 386 MCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMP-EKGLEPDSVTYSTMIDGYCKSE 444
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
++ A S E Q Y+ L+ G+ +K +++ + + K T+ ++
Sbjct: 445 NVAEA-FSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREM-LQKGFATTLSF 502
Query: 225 ICILSSYLMLGHLKEVGEIIDQW 247
++ Y ++E ++ +
Sbjct: 503 NTLIDGYCKSCKIQEASQLFQEM 525
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 100/245 (40%), Gaps = 3/245 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+Y A+++ K A +L E++ S L N ++Y+ ++ Y S G++E+ +++ +
Sbjct: 152 SYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGM 211
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
V PDIF YN IS + +++ +L E+ G D V + + Y
Sbjct: 212 SCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQ-GRGLKPDAVTFGAFILGYSKTGK 270
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ A + + + Y LI + GN + I++ L +
Sbjct: 271 MTEAAKYFDEMLDHGLMPNNPL-YTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCS 329
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 285
+ L G ++E ++ + K+ D+ + L+ F G EKA E H +
Sbjct: 330 AFIHGLLKNGRVQEALKVFSELKEKGLVP-DVFTYSSLISGFCKQGEVEKAFELHDEMCL 388
Query: 286 KNCAP 290
K AP
Sbjct: 389 KGIAP 393
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/249 (20%), Positives = 103/249 (41%), Gaps = 7/249 (2%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
S T+ L+ Y +A EL + +++ NL +A+ Y M+ + ++E
Sbjct: 115 SRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLE 174
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
++ + P++ Y+ I A+ I++ ++ LD MSC SG + D Y +++ A
Sbjct: 175 KMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSC-SGVAPDIFCYNAIISCLSKA 233
Query: 164 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 223
+ A S+ L+E + + +T+ I+ Y+ G + + + M + N
Sbjct: 234 GKMEEA-STYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFD--EMLDHGLMPNN 290
Query: 224 --YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 281
Y +++ + G+L E I D+ C+ + G ++A +
Sbjct: 291 PLYTVLINGHFKAGNLMEALSIFRHLHALGVLP-DVQTCSAFIHGLLKNGRVQEALKVFS 349
Query: 282 LLLQKNCAP 290
L +K P
Sbjct: 350 ELKEKGLVP 358
Score = 37.0 bits (84), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 50/283 (17%), Positives = 116/283 (40%), Gaps = 25/283 (8%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVK 71
Y +D + K I + F+G+P S TY+ ++ Y ++ +A LF +
Sbjct: 398 YNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMP 457
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
+ ++ +YN ++ G +EK + E+ +K + ++N I + I
Sbjct: 458 SKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKIQ 516
Query: 132 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA--------ESSTLVEA-----E 178
+ + EM D V Y +++ + A + A E + +V+ E
Sbjct: 517 EASQLFQEMIAKQ-IMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFE 575
Query: 179 KSIT---QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI--CILSSYLM 233
K + + +TY +++YA + ++ + + M ++ I ++++
Sbjct: 576 KMVAKGVKPDEVTYG--LVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCK 633
Query: 234 LGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
L E +++D+ + ++AC+ L+ +F + G ++A
Sbjct: 634 REDLTEASKLLDEMGELGLKP-SLAACSTLVRSFHEAGKMDEA 675
>gi|326490553|dbj|BAJ84940.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 856
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 73/163 (44%), Gaps = 11/163 (6%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L+ ++A + + E A +L+ R+++ LS + Y+ M+ GQ+ + E+
Sbjct: 435 TYCTLIDIHAKSGYLEVAMDLYGRMQEVGLSPDTFTYSAMVNCLGKGGQLAAAYKLFCEM 494
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
P++ TYN+ I+ A N D V K +M +G D + Y ++ + H
Sbjct: 495 IDNGCTPNLVTYNIIIALQAKARNYDNVVKLYRDMQI-AGFRPDKITYSIVMEVLGHCGH 553
Query: 166 LVNAESSTLVEAEKSITQRQWIT----YDFLIILYAGLGNKDK 204
L AE+ L +R W Y L+ L+ GN DK
Sbjct: 554 LDEAEAVFLE------MRRDWAPDEPVYGLLVDLWGKAGNVDK 590
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/257 (19%), Positives = 90/257 (35%), Gaps = 35/257 (13%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
TYT ++ + AK +L + + N + YN ++ Y + + V E
Sbjct: 363 GHTYTTMIGILGQAKQFGTMRKLLDEMSSVNCKPTVVTYNRIIHAYGRANYLREAVKVFE 422
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
E++ PD TY I A + ++ M + G S D Y +VN
Sbjct: 423 EMEGAGYQPDRVTYCTLIDIHAKSGYLEVAMDLYGRMQ-EVGLSPDTFTYSAMVNCLGKG 481
Query: 164 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 223
L A E + +TY+ +I L A N D + ++++ +++ +
Sbjct: 482 GQLA-AAYKLFCEMIDNGCTPNLVTYNIIIALQAKARNYDNVVKLYRDMQIAGFRPDKIT 540
Query: 224 YICILSSYLMLGHLKEV------------------GEIIDQWKQSATSD----------- 254
Y ++ GHL E G ++D W ++ D
Sbjct: 541 YSIVMEVLGHCGHLDEAEAVFLEMRRDWAPDEPVYGLLVDLWGKAGNVDKALGWYHAMLQ 600
Query: 255 ----FDISACNRLLGAF 267
++ CN LL AF
Sbjct: 601 DGLQPNVPTCNSLLSAF 617
>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
Length = 836
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 57/116 (49%), Gaps = 1/116 (0%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 102
+ TY++L+H + A+ L + +++ L N + Y ++ Y +GQ+ KV +V+
Sbjct: 675 SCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVL 734
Query: 103 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 158
+E+ N+ P+ FTY + I + K L+EM+ + G D V Y N
Sbjct: 735 QEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMT-EKGILPDAVTYNAFTN 789
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/232 (19%), Positives = 102/232 (43%), Gaps = 3/232 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T AL+H A ++ +L + + L F+ + YN +++ G+V++ + EE+
Sbjct: 503 TSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEM 562
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+K + PDI+T+NL + ID+ + E +G + Y +++ Y A+
Sbjct: 563 VKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECK-KNGYVPNVYTYGVMIDGYCKANK 621
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ E + L E + + Y+ LI Y GN + ++ ++ ++ Y
Sbjct: 622 VEEGE-NLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYS 680
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 277
++ +G + + ++D+ ++ ++ ++G +S +G K N
Sbjct: 681 SLMHGLCNIGLVDDAKHLLDEMRKEGLLP-NVVCYTTIIGGYSKLGQMNKVN 731
Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 56/125 (44%), Gaps = 3/125 (2%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
YT ++ Y+ K + + + N+ N Y M+ + +G+ ++ A ++ E+
Sbjct: 714 YTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMT 773
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGG-SDDWVKYVNLVNIYITASH 165
K ++PD TYN + + +++ K DEMS SG D + Y L++ S
Sbjct: 774 EKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMS--SGAVCLDEITYTTLIDGCHQPST 831
Query: 166 LVNAE 170
N E
Sbjct: 832 ATNQE 836
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 61/155 (39%), Gaps = 2/155 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY ++ Y A E+ E L + L N+++YN ++ Y G + + +++
Sbjct: 608 TYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDM 667
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K + V+ TY+ + +D K LDEM G + V Y ++ Y
Sbjct: 668 KSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMR-KEGLLPNVVCYTTIIGGYSKLGQ 726
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 200
+ N + L E TY +I + LG
Sbjct: 727 M-NKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLG 760
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/123 (20%), Positives = 61/123 (49%), Gaps = 1/123 (0%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
++ +++ + + A LF ++++ ++ N + YN ++ G++++ E++
Sbjct: 259 FSTMINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMV 318
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
++ V P + TY+++I+ ID+ L EMS + G + V Y L++ Y ++
Sbjct: 319 KEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMS-ELGFVPNEVVYNTLIDGYCKMGNI 377
Query: 167 VNA 169
A
Sbjct: 378 SEA 380
>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
Length = 581
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/316 (19%), Positives = 124/316 (39%), Gaps = 73/316 (23%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT ++ A ++A+ELF ++ + S N + YN ++ +E+ ++EE+
Sbjct: 47 TYTIIVDRLCRAGKVDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEM 106
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN-IY---- 160
K PD TYN +S + + K+F D M G S D V Y L++ +Y
Sbjct: 107 ASKGYEPDNITYNTILSGLCRMGKVSEAKQFFDSMP-SRGYSPDVVAYNGLLDALYKEGK 165
Query: 161 ----------------------ITASHLVNA-----ESSTLVEAEKSITQRQW----ITY 189
IT + L++ ++ ++ K + + + +TY
Sbjct: 166 VAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTY 225
Query: 190 DFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQ 249
+ +++ A N D+ ++++K + + Y +LS + +G++ E+ ++ +
Sbjct: 226 NSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTE 285
Query: 250 SATSDFDISACNRL----------------------LGAFSDV-------------GLTE 274
S D+ CN + +GA DV L +
Sbjct: 286 KRFSP-DVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVD 344
Query: 275 KANEFHMLLLQKNCAP 290
KA+E ++ CAP
Sbjct: 345 KAHELFSTMVDNGCAP 360
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 56/118 (47%), Gaps = 1/118 (0%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
A TY+ +L + + EL+E + + S + L+ N ++ + +V+
Sbjct: 254 APNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHK 313
Query: 101 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 158
V+EE+ + VPD+ TYN+ + T +D+ + M D+G + D V Y ++N
Sbjct: 314 VLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMV-DNGCAPDIVSYSVVLN 370
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/126 (20%), Positives = 54/126 (42%), Gaps = 2/126 (1%)
Query: 18 IDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNL 75
ID++ K + + E + + TY LL +KA ELF + +
Sbjct: 299 IDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGC 358
Query: 76 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKK 135
+ + + Y+ ++ +V ++ + + + +VPD+ T+N+ + +D+ K
Sbjct: 359 APDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKD 418
Query: 136 FLDEMS 141
LD MS
Sbjct: 419 LLDVMS 424
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 92/221 (41%), Gaps = 17/221 (7%)
Query: 78 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFL 137
+ + Y+ +++ G+V + +VEE+ K V PD+ TY + + +D+ +
Sbjct: 9 DVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEADELF 68
Query: 138 DEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYA 197
+M + G S + V Y L+N ++ A L E + ITY+ ++
Sbjct: 69 HKM-IERGCSANTVAYNALINGLCKDENIERA-YKLLEEMASKGYEPDNITYNTILSGLC 126
Query: 198 GLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSY-LMLGHLKEVGEIIDQWKQSATSDF- 255
+G + Q + S M SR Y + +Y +L L + G++ + W T D
Sbjct: 127 RMGKVSEAKQFFDS-------MPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMA 179
Query: 256 ------DISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
D+ N L+ F V T++A + ++ K P
Sbjct: 180 DRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMP 220
Score = 40.8 bits (94), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 61/137 (44%), Gaps = 3/137 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T T L+H K T++A LF+ + + + L +N ++ G++ + L + +
Sbjct: 434 TCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSM 493
Query: 106 KRKN--VVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
+ + PD+ TY +++ +DQ + +M+ SG + D+V Y L+N
Sbjct: 494 VKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMT-GSGCAPDYVAYNTLMNGLRKQ 552
Query: 164 SHLVNAESSTLVEAEKS 180
+ A+ T EK
Sbjct: 553 GRHIQADRLTQAMKEKG 569
>gi|302805546|ref|XP_002984524.1| hypothetical protein SELMODRAFT_423640 [Selaginella moellendorffii]
gi|300147912|gb|EFJ14574.1| hypothetical protein SELMODRAFT_423640 [Selaginella moellendorffii]
Length = 547
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 115/253 (45%), Gaps = 17/253 (6%)
Query: 18 IDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNL-S 76
IDL+++V + F+ LP K+ E YT LL +Y AE ++ +K+ L S
Sbjct: 135 IDLVSRV-SVTRAREMFDNLPADWKSREGYTVLLSMYVRHSMAADAESIYTTLKRWGLRS 193
Query: 77 FNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKF 136
+ + N M+TLY KVA ++ + + ++ ++N+ + + +++
Sbjct: 194 ISPI--NMMLTLYQKHQVFWKVAELIRDAEEAGQSLNMCSFNILLPMTFRAGGVAEMESL 251
Query: 137 LDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLV---EAEKSITQRQWITYDFLI 193
++ M +S D Y L + Y A + A+ +V E R TY+ +I
Sbjct: 252 VEMM--ESKNFLDEHTYCMLASSYGRAGMVDKAKEMLMVVEDGMETGKFNRLRRTYNVII 309
Query: 194 ILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLK--EVGEIIDQWKQSA 251
++Y +G+ + + +IW ++ T+ +YIC++ S +G + E G + +A
Sbjct: 310 VIYGFIGDVEGVKRIWDI--TSRMDPTAEDYICMIRSSAKVGLFEQAESGFL----ALAA 363
Query: 252 TSDFDISACNRLL 264
I+ CN +L
Sbjct: 364 QRKMHITVCNVML 376
>gi|302833221|ref|XP_002948174.1| hypothetical protein VOLCADRAFT_116752 [Volvox carteri f.
nagariensis]
gi|300266394|gb|EFJ50581.1| hypothetical protein VOLCADRAFT_116752 [Volvox carteri f.
nagariensis]
Length = 1001
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/117 (24%), Positives = 59/117 (50%), Gaps = 1/117 (0%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
S TY AL+ Y KA E+++ + + N+ + + Y+ +++ GQ E +
Sbjct: 284 STTYNALISAYGKTTQLGKALEVYQEMLRQNMDRSVITYSSLISACEKAGQWETALRIFN 343
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
E+++ VP+ TYN +++CA ++ + ++M+ G + D V Y L++ Y
Sbjct: 344 EMQQDKCVPNTVTYNSLVTACAQGGQWEKAAEVFEQMNA-HGCTPDVVTYTALISAY 399
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 55/250 (22%), Positives = 105/250 (42%), Gaps = 5/250 (2%)
Query: 42 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 101
+ TYTAL+++ A +++ ++ N N + YN ++ +Y +GQ E+ V
Sbjct: 177 RNVHTYTALMNVCIKCGKLPLALDIYNSMRAVNCMPNVVTYNTLVDVYGKLGQWERAIHV 236
Query: 102 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 161
++ +K + V P + TYN I +C + + D G + + Y L++ Y
Sbjct: 237 LDVMKHEGVEPVLRTYNTLIIACNMCNQPREALAVYQRLLSD-GFTPNSTTYNALISAYG 295
Query: 162 TASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 221
+ L A E + R ITY LI G + +I+ ++ K +
Sbjct: 296 KTTQLGKA-LEVYQEMLRQNMDRSVITYSSLISACEKAGQWETALRIFNEMQQDKCVPNT 354
Query: 222 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA-NEFH 280
Y ++++ G ++ E+ +Q + D+ L+ A+ G +KA FH
Sbjct: 355 VTYNSLVTACAQGGQWEKAAEVFEQMNAHGCTP-DVVTYTALISAYERGGQWQKALQAFH 413
Query: 281 MLLLQKNCAP 290
+ +Q C P
Sbjct: 414 KMCVQ-GCKP 422
Score = 43.9 bits (102), Expect = 0.096, Method: Composition-based stats.
Identities = 47/248 (18%), Positives = 100/248 (40%), Gaps = 9/248 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+YTA + L + ++A EL + ++ N+ N Y +M + + G++ + +
Sbjct: 146 SYTATISLCIHGQDVDRALELMQEMRSRNIERNVHTYTALMNVCIKCGKLPLALDIYNSM 205
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ N +P++ TYN + ++ LD M + G + ++ N + I A +
Sbjct: 206 RAVNCMPNVVTYNTLVDVYGKLGQWERAIHVLDVMKHE--GVEPVLRTYNTL---IIACN 260
Query: 166 LVNAESSTLVEAEKSITQ---RQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 222
+ N L ++ ++ TY+ LI Y K ++++ + +
Sbjct: 261 MCNQPREALAVYQRLLSDGFTPNSTTYNALISAYGKTTQLGKALEVYQEMLRQNMDRSVI 320
Query: 223 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 282
Y ++S+ G + I ++ +Q ++ N L+ A + G EKA E
Sbjct: 321 TYSSLISACEKAGQWETALRIFNEMQQDKCVPNTVTY-NSLVTACAQGGQWEKAAEVFEQ 379
Query: 283 LLQKNCAP 290
+ C P
Sbjct: 380 MNAHGCTP 387
>gi|449465242|ref|XP_004150337.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Cucumis sativus]
Length = 690
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 82/175 (46%), Gaps = 8/175 (4%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
+ Y ++L T +A EL +V + +S + +MYN +++ + QV + + E+
Sbjct: 447 DAYISMLESLCRGGKTVEAIELLSKVHEKGISTDTMMYNTVLSTLGKLKQVSHLHDLYEK 506
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+K+ PDIFTYN+ ISS + + + +E+ S D + Y +L+N
Sbjct: 507 MKQDGPFPDIFTYNILISSLGRVGKVKEAVEVFEELE-SSDCKPDIISYNSLINCLGKNG 565
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL--RMTKQ 217
+ A L +K + +TY LI + G DK+ ++ +SL RM Q
Sbjct: 566 DVDEAHMRFLEMQDKGLNP-DVVTYSTLIECF---GKTDKV-EMARSLFDRMITQ 615
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 71/164 (43%), Gaps = 6/164 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L+ ++A E+FE ++ S+ + + YN ++ G V++ + E+
Sbjct: 518 TYNILISSLGRVGKVKEAVEVFEELESSDCKPDIISYNSLINCLGKNGDVDEAHMRFLEM 577
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ K + PD+ TY+ I T ++ + D M G + V Y L++ A
Sbjct: 578 QDKGLNPDVVTYSTLIECFGKTDKVEMARSLFDRM-ITQGCCPNIVTYNILLDCLERAGR 636
Query: 166 LVNAESSTLVEA--EKSITQRQWITYDFLIILYAGLGNKDKIDQ 207
AE+ L E+ +T ITY L L +G K ++ +
Sbjct: 637 --TAETVDLYAKLREQGLTP-DSITYAILDRLQSGSNRKFRVRR 677
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 45/93 (48%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT ++ + E++ LFE + + N + YN M+ G V+K L+ +
Sbjct: 311 TYTIMIRMTGKMGRAEESLALFEEMLTKGCTPNLIAYNTMIQALSKSGMVDKAILLFCNM 370
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLD 138
+ N P+ FTY++ ++ A + ++ + L+
Sbjct: 371 IKNNCRPNEFTYSIILNVLVAEGQLGRLDEVLE 403
>gi|302805861|ref|XP_002984681.1| hypothetical protein SELMODRAFT_30598 [Selaginella moellendorffii]
gi|300147663|gb|EFJ14326.1| hypothetical protein SELMODRAFT_30598 [Selaginella moellendorffii]
Length = 651
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 110/251 (43%), Gaps = 5/251 (1%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 102
T ETYT++L Y +KA E+F+R+K + L + YN +++ Q+E L++
Sbjct: 394 TIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLML 453
Query: 103 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 162
E+ VVP Y A T ++++ M ++ + D V Y L+
Sbjct: 454 NEMLANGVVPSERIYTALTEGYARTGDVEKAFGVFQRMKKEN-LAIDIVAYGALLKACCN 512
Query: 163 ASHLVNAESSTLVEAEKSITQRQWITY-DFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 221
+ + A + + + + ITY L YA G ++ +++ ++ K +
Sbjct: 513 SGAMHGA-AEVFQQITDAGLKHNQITYCTMLDGAYARAGRVEEAEELVSAMERDGTKPDT 571
Query: 222 RNYICILSSYLMLGHLKEVGEIIDQWKQSAT--SDFDISACNRLLGAFSDVGLTEKANEF 279
Y ++++Y + G +++ ++ + +S++ + DI N L+ ++ G +A E
Sbjct: 572 LIYNSLINAYGVSGRHEDMEALLAKMVKSSSKQTKPDIGTYNTLIQVYAQAGFIPRAEEL 631
Query: 280 HMLLLQKNCAP 290
L + P
Sbjct: 632 FQGLARLKLVP 642
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/244 (19%), Positives = 91/244 (37%), Gaps = 37/244 (15%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y L+H + A +KA + E ++ + L Y ++ Y+ G ++K V + IK
Sbjct: 363 YNILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKALEVFDRIK 422
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
+ P + +YN +S A ++ + L+EM L
Sbjct: 423 TAGLRPGVVSYNSLLSGLAKARQMENARLMLNEM-------------------------L 457
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 226
N +V +E+ Y L YA G+ +K +++ ++ + Y
Sbjct: 458 ANG----VVPSER--------IYTALTEGYARTGDVEKAFGVFQRMKKENLAIDIVAYGA 505
Query: 227 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 286
+L + G + E+ Q + I+ C L GA++ G E+A E + +
Sbjct: 506 LLKACCNSGAMHGAAEVFQQITDAGLKHNQITYCTMLDGAYARAGRVEEAEELVSAMERD 565
Query: 287 NCAP 290
P
Sbjct: 566 GTKP 569
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 54/268 (20%), Positives = 105/268 (39%), Gaps = 30/268 (11%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
+ +++ YA A E AE FE+ K NL ++YN ++ Y G +E V ++ +++
Sbjct: 204 FCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVEALLAQME 263
Query: 107 RKNVVPDI---------------------FTYNLWISSCAATLNIDQVKKFLDEMSCDSG 145
+ ++ F + L +S A N+ + L+EM G
Sbjct: 264 EEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKVSPQAG--NMAKALDILEEMD-KHG 320
Query: 146 GSDDWVKYVNLVNIYITASHLVNAES--STLVEAEKSITQRQWITYDFLIILYAGLGNKD 203
S + + Y +++ Y A +V A + + Y+ L+ + G D
Sbjct: 321 VSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAG---LKPDIVIYNILVHAFCKAGRMD 377
Query: 204 KIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRL 263
K + +++ + T Y IL Y+ G++++ E+ D+ K + +S N L
Sbjct: 378 KALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVS-YNSL 436
Query: 264 LGAFSDVGLTEKANEFHMLLLQKNCAPT 291
L + E A +L P+
Sbjct: 437 LSGLAKARQMENARLMLNEMLANGVVPS 464
Score = 44.7 bits (104), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 45/94 (47%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
YT+L+H YA A+ E A E + + N ++ +++ Y S G E E+ K
Sbjct: 169 YTSLIHAYAEARDMEGAVACTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFK 228
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
+N+VP YN + + N++ V+ L +M
Sbjct: 229 AENLVPGGIVYNSIVQAYCQAGNMETVEALLAQM 262
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 101/213 (47%), Gaps = 21/213 (9%)
Query: 65 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 124
++F+R++ SN M+N MM Y+ EK L+ + + + NV PD +TY L + +C
Sbjct: 96 QIFDRIENSN----GFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQAC 151
Query: 125 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR 184
A L K+ D + SD +V+ L+N+Y ++ +A L + +
Sbjct: 152 AVRLLEFGGKEIHDHVLKVGFDSDVYVQNT-LINMYAVCGNMRDARK--LFDESPVLDSV 208
Query: 185 QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEII 244
W + + AG K +++ ++ +M RN + S ++LG ++G+++
Sbjct: 209 SWNS------ILAGYVKKGDVEEA----KLIFDQMPQRNIVASNSMIVLLG---KMGQVM 255
Query: 245 DQWKQ-SATSDFDISACNRLLGAFSDVGLTEKA 276
+ WK + + D+ + + L+ + G+ E+A
Sbjct: 256 EAWKLFNEMDEKDMVSWSALISGYEQNGMYEEA 288
>gi|159465707|ref|XP_001691064.1| predicted mitochondrial protein [Chlamydomonas reinhardtii]
gi|158279750|gb|EDP05510.1| predicted mitochondrial protein [Chlamydomonas reinhardtii]
Length = 630
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 60/117 (51%), Gaps = 1/117 (0%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
S TY AL+ Y KA E+++ + + N+ + + Y+ +++ GQ E +
Sbjct: 208 STTYNALISAYGKTMQLGKALEVYQEMLRQNMERSVITYSSLISACEKAGQWETALRIFN 267
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
E+++ N VP+ TYN +++CA ++ + ++M+ G + D V Y L++ Y
Sbjct: 268 EMQQDNCVPNTVTYNSLVTACAQGGQWEKATEVFEQMTAH-GCTPDVVTYTALISAY 323
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 50/249 (20%), Positives = 104/249 (41%), Gaps = 3/249 (1%)
Query: 42 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 101
+ T+TAL+++ A E++ ++ +N N + YN ++ +Y +G+ E+ V
Sbjct: 101 RNVHTFTALMNVCIKCGKLPLALEIYNNMRAANCMPNVVTYNTLVDVYGKLGRWERAIHV 160
Query: 102 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 161
++ +K++ V P + TYN I +C + + D G + + Y L++ Y
Sbjct: 161 LDLMKQEGVEPVLRTYNTLIIACNMCNQPREALAVYQRLLSD-GYTPNSTTYNALISAYG 219
Query: 162 TASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 221
L A E + +R ITY LI G + +I+ ++ +
Sbjct: 220 KTMQLGKA-LEVYQEMLRQNMERSVITYSSLISACEKAGQWETALRIFNEMQQDNCVPNT 278
Query: 222 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 281
Y ++++ G ++ E+ +Q + D+ L+ A+ G +KA +
Sbjct: 279 VTYNSLVTACAQGGQWEKATEVFEQMTAHGCTP-DVVTYTALISAYERGGQWQKALQAFG 337
Query: 282 LLLQKNCAP 290
+ + C P
Sbjct: 338 KMCMQGCKP 346
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 47/248 (18%), Positives = 102/248 (41%), Gaps = 9/248 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+YTA + L ++ ++A EL ++Q N+ N + +M + + G++ + +
Sbjct: 70 SYTATISLCIYSQDVDRAMELMNEMRQRNIERNVHTFTALMNVCIKCGKLPLALEIYNNM 129
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ N +P++ TYN + ++ LD M + G + ++ N + I A +
Sbjct: 130 RAANCMPNVVTYNTLVDVYGKLGRWERAIHVLDLMKQE--GVEPVLRTYNTL---IIACN 184
Query: 166 LVNAESSTLVEAEKSITQ---RQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 222
+ N L ++ ++ TY+ LI Y K ++++ + + +
Sbjct: 185 MCNQPREALAVYQRLLSDGYTPNSTTYNALISAYGKTMQLGKALEVYQEMLRQNMERSVI 244
Query: 223 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 282
Y ++S+ G + I ++ +Q ++ N L+ A + G EKA E
Sbjct: 245 TYSSLISACEKAGQWETALRIFNEMQQDNCVPNTVTY-NSLVTACAQGGQWEKATEVFEQ 303
Query: 283 LLQKNCAP 290
+ C P
Sbjct: 304 MTAHGCTP 311
>gi|297806463|ref|XP_002871115.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316952|gb|EFH47374.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 942
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 96/224 (42%), Gaps = 15/224 (6%)
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTY--- 117
E+AE L +++ + +Y+ MM Y V +K +V + +K P + TY
Sbjct: 432 ERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLIVFKRLKECGFTPTVVTYGCL 491
Query: 118 -NLW--ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTL 174
NL+ + + L + +V K + G + Y ++N ++ NA +
Sbjct: 492 INLYTKVGKISKALEVSRVMK-------EEGVKHNLKTYSMMINGFVKLKDWANA-FAVF 543
Query: 175 VEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLML 234
+ K + I Y+ +I + G+GN D+ Q K ++ + + T+R ++ I++ +
Sbjct: 544 EDMVKEGMKPDVILYNNIIAAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIINGFAKS 603
Query: 235 GHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 278
G ++ E+ D ++ + N L+ + EKA E
Sbjct: 604 GDMRRSLEVFDMMRRCGCVP-TVHTFNALINGLVEKRQMEKAVE 646
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 81/195 (41%), Gaps = 2/195 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT ++ YA T KA E F R++ L + Y ++ G+++ V +E+
Sbjct: 662 TYTKIMQGYASVGDTGKAFEYFTRLQNEGLEVDIFTYEALLKACCKSGRMQSALAVTKEM 721
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+N+ + F YN+ I A ++ + + +M G D Y + ++ A
Sbjct: 722 SARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMK-KEGVKPDIHTYTSFISACSKAGD 780
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ N + T+ E E + TY LI +A +K ++ ++ K Y
Sbjct: 781 M-NRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAVGLKPDKAVYH 839
Query: 226 CILSSYLMLGHLKEV 240
C+L+S L + E
Sbjct: 840 CLLTSLLSRASIAEA 854
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 45/99 (45%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 102
T T+ AL++ + EKA E+ + + + +S N Y ++M Y SVG K
Sbjct: 624 TVHTFNALINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYF 683
Query: 103 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 141
++ + + DIFTY + +C + + EMS
Sbjct: 684 TRLQNEGLEVDIFTYEALLKACCKSGRMQSALAVTKEMS 722
Score = 37.7 bits (86), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 46/95 (48%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L++LY KA E+ +K+ + N Y+ M+ ++ + V E++
Sbjct: 487 TYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDM 546
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
++ + PD+ YN I++ N+D+ + + EM
Sbjct: 547 VKEGMKPDVILYNNIIAAFCGMGNMDRAIQTVKEM 581
>gi|242059435|ref|XP_002458863.1| hypothetical protein SORBIDRAFT_03g041710 [Sorghum bicolor]
gi|241930838|gb|EES03983.1| hypothetical protein SORBIDRAFT_03g041710 [Sorghum bicolor]
Length = 544
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 64/156 (41%), Gaps = 35/156 (22%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQS 73
+AT I K + R+FE P +T T+T L+H Y A E A E+F+R+
Sbjct: 156 WATLIRGFAKKGDMAEARRWFETTPPGMRTVVTWTVLVHGYVSAGDMEAAREVFDRMP-- 213
Query: 74 NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVV---------------------- 111
+ NA +++ M+T Y G E+ V I +N+V
Sbjct: 214 --ARNAFVWSSMVTGYFKAGNAEEAQAVFHRIPTRNLVNWNALIAGYAQIGCSEKALEAF 271
Query: 112 ---------PDIFTYNLWISSCAATLNIDQVKKFLD 138
PD FT +S+CA +++Q KK D
Sbjct: 272 DSMLQERVKPDEFTMASLLSACAQLGSLEQGKKVHD 307
>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 109/268 (40%), Gaps = 36/268 (13%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY ++ + + A + + + S N ++Y ++ ++ + V++E+
Sbjct: 419 TYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM 478
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K + + PDIF YN I + +D+ + FL EM ++G + Y ++ YI AS
Sbjct: 479 KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEM-VENGLKPNAFTYGAFISGYIEASE 537
Query: 166 LVNAES---------------------STLVEAEKSI----TQRQWITYDFL------II 194
+A+ + + EK I R + L +
Sbjct: 538 FASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTV 597
Query: 195 LYAGLGNKDKID---QIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 251
L GL DK+D +I++ +R +Y +++ + LG++++ I D+ +
Sbjct: 598 LMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG 657
Query: 252 TSDFDISACNRLLGAFSDVGLTEKANEF 279
+ ++ N LLG F G EKA E
Sbjct: 658 LTP-NVIIYNMLLGGFCRSGEIEKAKEL 684
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 64/126 (50%), Gaps = 1/126 (0%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
++TYT L++ + AEE+F ++ ++ + Y ++ + +G ++K + + +
Sbjct: 592 AKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFD 651
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
E+ + + P++ YN+ + + I++ K+ LDEMS G + V Y +++ Y +
Sbjct: 652 EMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSV-KGLHPNAVTYCTIIDGYCKS 710
Query: 164 SHLVNA 169
L A
Sbjct: 711 GDLAEA 716
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 114/289 (39%), Gaps = 42/289 (14%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y LL + + EKA+EL + + L NA+ Y ++ Y G + + + +E+K
Sbjct: 665 YNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMK 724
Query: 107 RKNVVPDIFTYNLWISSCA-----------------------ATLN--IDQVKKF----- 136
K +VPD F Y + C A N I+ V KF
Sbjct: 725 LKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTEL 784
Query: 137 -------LDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITY 189
L + S D G + V Y N++ Y+ + A + + + ITY
Sbjct: 785 KTEVLNRLMDGSFDRFGKPNDVTY-NIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITY 843
Query: 190 DFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ-WK 248
L+ Y +G + ++ ++ + Y I++++L G + ++DQ +
Sbjct: 844 TSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFA 903
Query: 249 QSATSD---FDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
++A D IS C LL F+ VG E A + +++ P +A+
Sbjct: 904 KNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSAT 952
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 53/268 (19%), Positives = 109/268 (40%), Gaps = 39/268 (14%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+Y L++ ++ +KA +F+ + + L+ N ++YN ++ + G++EK +++E+
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEM 688
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN------- 158
K + P+ TY I + ++ + + DEM D +V Y LV+
Sbjct: 689 SVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFV-YTTLVDGCCRLND 747
Query: 159 ----IYITASHLVNAESSTL--------------VEAEKSITQRQW------------IT 188
I I ++ SST E + + R +T
Sbjct: 748 VERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVT 807
Query: 189 YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK 248
Y+ +I GN + +++ ++ T Y +L+ Y +G E+ + D+
Sbjct: 808 YNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDE-A 866
Query: 249 QSATSDFDISACNRLLGAFSDVGLTEKA 276
+A + D + ++ AF G+T KA
Sbjct: 867 IAAGIEPDHIMYSVIINAFLKEGMTTKA 894
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 66/147 (44%), Gaps = 5/147 (3%)
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
EKA+ LF+ + S L A Y ++ Y V + ++ E+K++N+V +TY
Sbjct: 364 EKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTV 423
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
+ ++ ++D + EM SG + V Y L+ ++ S +A L E ++
Sbjct: 424 VKGMCSSGDLDGAYNIVKEMIA-SGCRPNVVIYTTLIKTFLQNSRFGDA-MRVLKEMKEQ 481
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQ 207
Y+ LII GL ++D+
Sbjct: 482 GIAPDIFCYNSLII---GLSKAKRMDE 505
>gi|255584314|ref|XP_002532893.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527353|gb|EEF29498.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 625
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 105/225 (46%), Gaps = 7/225 (3%)
Query: 48 TALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKR 107
T LL+ A + T+ ++++++ + + N +YN ++ G VEK ++ E++
Sbjct: 169 TVLLNSLAKDRLTDMVWKVYKKMARIGVEANIHVYNVLIHACCKSGDVEKADNLLSEMES 228
Query: 108 KNVVPDIFTYNLWIS-SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
K V PD+FTYN IS C ++ + + D M G D V Y +L++ + +
Sbjct: 229 KCVFPDLFTYNTLISLYCKKGMHYEAL-SVQDRME-REGIKPDIVTYNSLIHGFCKEGRM 286
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 226
E+ L + + T +TY LI Y L + D+ ++ + + T Y
Sbjct: 287 --REAMRLFKEIRDATPNH-VTYTTLIDGYCRLNDLDQALRLREEMEAQGLYPTVVTYNS 343
Query: 227 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 271
IL +G +++ +++++ + +++ CN L+ A+ +G
Sbjct: 344 ILRKLCEIGRIRDANKLLNEMSEKKIEPDNVT-CNTLINAYCKIG 387
Score = 44.7 bits (104), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 47/249 (18%), Positives = 103/249 (41%), Gaps = 9/249 (3%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
Y L+H + EKA+ L ++ + + YN +++LY G + V +
Sbjct: 201 HVYNVLIHACCKSGDVEKADNLLSEMESKCVFPDLFTYNTLISLYCKKGMHYEALSVQDR 260
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
++R+ + PDI TYN I + + + E+ + + V Y L++ Y +
Sbjct: 261 MEREGIKPDIVTYNSLIHGFCKEGRMREAMRLFKEI---RDATPNHVTYTTLIDGYCRLN 317
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
L A E E +TY+ ++ +G +++ M+++K+ N
Sbjct: 318 DLDQA-LRLREEMEAQGLYPTVVTYNSILRKLCEIGRIRDANKLLNE--MSEKKIEPDNV 374
Query: 225 IC--ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 282
C ++++Y +G +K ++ ++ ++ D L+ F + + A E +
Sbjct: 375 TCNTLINAYCKIGDMKSALKVKNRMVEAGLK-LDQFTYKALIHGFCKIREMDGAKELLLS 433
Query: 283 LLQKNCAPT 291
+L +P+
Sbjct: 434 MLDAGFSPS 442
>gi|357454999|ref|XP_003597780.1| Beta-D-galactosidase [Medicago truncatula]
gi|357455013|ref|XP_003597787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355486828|gb|AES68031.1| Beta-D-galactosidase [Medicago truncatula]
gi|355486835|gb|AES68038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 59/124 (47%), Gaps = 1/124 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY+AL+ + + A LF+ +K++ L A +Y +M +Y +G+VE+ +V E+
Sbjct: 233 TYSALISAFGKLNRDDSAVRLFDEMKENGLQPTAKIYTTLMGIYFKLGKVEEALNLVHEM 292
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ + VP ++TY I + ++ M D G D V NL+NI +
Sbjct: 293 RMRRCVPTVYTYTELIRGLGKSGRVEDAYGVYKNMLKD-GCKPDVVLMNNLINILGRSDR 351
Query: 166 LVNA 169
L A
Sbjct: 352 LKEA 355
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Query: 35 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 94
+G P Y +L++ AK E A ELF+ +K++ S + +Y M+ + G+
Sbjct: 436 KGFP---PCPAAYCSLINSLGKAKRYEAANELFQELKENCGSSSVRVYAVMIKHFGKCGR 492
Query: 95 VEKVALVVEEIKRKNVVPDIFTYNLWISS 123
+ + E+K+ +PD++ YN I+
Sbjct: 493 FNEAMGLFNEMKKLGCIPDVYAYNALITG 521
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 71/177 (40%), Gaps = 15/177 (8%)
Query: 38 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 97
P + SE + ++ + K KA +F +VK A YN ++ + M G EK
Sbjct: 155 PCAIGPSE-LSEIVKILGRVKMVNKALSIFYQVKGRKCRPTAGTYNSVILMLMQEGHHEK 213
Query: 98 V-ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 156
V L E + PD TY+ IS+ D + DEM ++G Y L
Sbjct: 214 VHELYNEMCSEGHCFPDTVTYSALISAFGKLNRDDSAVRLFDEMK-ENGLQPTAKIYTTL 272
Query: 157 VNIYITASHLVNAESSTLVEAEKSITQRQWI----TYDFLIILYAGLGNKDKIDQIW 209
+ IY + E+ LV + R+ + TY LI GLG +++ +
Sbjct: 273 MGIYFKLGKV--EEALNLVH---EMRMRRCVPTVYTYTELI---RGLGKSGRVEDAY 321
>gi|255551975|ref|XP_002517032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543667|gb|EEF45195.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 875
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 91/202 (45%), Gaps = 3/202 (1%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 102
+S TY ++ Y A ++A ++F + + + + +N M+ + + GQ+E+VAL++
Sbjct: 329 SSHTYNTMIDTYGKAGQIKEASDIFAEMLRKRILPTTVTFNTMIHICGNQGQLEEVALLM 388
Query: 103 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 162
++++ PD TYN+ I A +I+ + M D D V Y L+ + +
Sbjct: 389 QKMEELRCPPDTRTYNILIFIHAKHNDINMAASYFKRMKKDQ-LQPDLVSYRTLLYAF-S 446
Query: 163 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 222
H+VN + + E ++ + T L +Y G +K +W M+S
Sbjct: 447 IRHMVNDAENLVSEMDEKGIEIDEYTQSALTRMYIEAGMLEK-SWLWFWRFHLAGNMSSE 505
Query: 223 NYICILSSYLMLGHLKEVGEII 244
Y + +Y GH+KE +
Sbjct: 506 CYSANIDAYGERGHVKEAARVF 527
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 115/231 (49%), Gaps = 4/231 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+Y++L+ + A A +KA+ ++++++ L + + Y +++ ++ +G++E V +E+
Sbjct: 575 SYSSLVQILASADLPDKAKHYLKKMQEAGLVSDCVQYCAVISSFVKLGKLEMAEEVYKEM 634
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+V PDI Y + I++ A + + + ++D M +G + V Y +L+ +Y +
Sbjct: 635 VGFDVKPDIIVYGVLINAFADSGCVKEAISYIDAMK-GAGLPGNTVIYNSLIKLYTKVGY 693
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
L A+ + + + + + + +I LY+ ++I++S++ K Y
Sbjct: 694 LREAQETYKLLQSSDVGPETY-SSNCMIDLYSEQSMVKPAEEIFESMK-RKGDANEFTYA 751
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
+L Y LG ++ +I Q ++ + +S N +LG ++ G ++A
Sbjct: 752 MMLCMYKRLGWFEQAIQIAKQMRELGLLTYLLSY-NNVLGLYALDGRFKEA 801
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 67/141 (47%), Gaps = 4/141 (2%)
Query: 58 KWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTY 117
K T KA E +Q ++S ++ YN M+ Y GQ+++ + + E+ RK ++P T+
Sbjct: 309 KVTGKASVRVENERQMDVSLSSHTYNTMIDTYGKAGQIKEASDIFAEMLRKRILPTTVTF 368
Query: 118 NLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL-VNAESSTLVE 176
N I C +++V + +M D + N++ I+I A H +N +S
Sbjct: 369 NTMIHICGNQGQLEEVALLMQKMEELRCPPD--TRTYNIL-IFIHAKHNDINMAASYFKR 425
Query: 177 AEKSITQRQWITYDFLIILYA 197
+K Q ++Y L+ ++
Sbjct: 426 MKKDQLQPDLVSYRTLLYAFS 446
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
Query: 18 IDLMTKVFGIHSGERYFEGLPLSAKTSE-TYTALLHLYAGAKWTEKAEELFERVKQSNLS 76
IDL ++ + E FE + +E TY +L +Y W E+A ++ +++++ L
Sbjct: 720 IDLYSEQSMVKPAEEIFESMKRKGDANEFTYAMMLCMYKRLGWFEQAIQIAKQMRELGLL 779
Query: 77 FNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTY 117
L YN ++ LY G+ ++ +E+ + PD T+
Sbjct: 780 TYLLSYNNVLGLYALDGRFKEAVGTFKEMVGAGIQPDDCTF 820
>gi|302761794|ref|XP_002964319.1| hypothetical protein SELMODRAFT_63559 [Selaginella moellendorffii]
gi|300168048|gb|EFJ34652.1| hypothetical protein SELMODRAFT_63559 [Selaginella moellendorffii]
Length = 384
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 2/148 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT L+ YA A + +LF+ +K S N+ YN ++ Y G ++ + +E+
Sbjct: 90 TYTNLIKEYANAGRLQDCRKLFQEMKDKGESPNSWTYNALIQGYGRKGLFKEALELYDEM 149
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
D+ TYN+ I+ ++ +++ LDEM G D V Y L+++Y S+
Sbjct: 150 DGVGCAKDVHTYNIAIAMYGKRGLLEDMERLLDEMDT-KGVPPDQVTYNTLLDVYAKKSY 208
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLI 193
V A E W TY+ ++
Sbjct: 209 FVKAHEILREMTEAGYRPNIW-TYNIML 235
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 54/261 (20%), Positives = 103/261 (39%), Gaps = 5/261 (1%)
Query: 32 RYFEGLPLSAKTSET--YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLY 89
R E + S K + Y L++ + E AE++ + +KQ +S N + Y ++ Y
Sbjct: 39 RLLEVMKESGKKPDEILYNCLVNGLVNSGRLEAAEKILDDMKQDKVSANLVTYTNLIKEY 98
Query: 90 MSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDD 149
+ G+++ + +E+K K P+ +TYN I + + DEM D G
Sbjct: 99 ANAGRLQDCRKLFQEMKDKGESPNSWTYNALIQGYGRKGLFKEALELYDEM--DGVGCAK 156
Query: 150 WVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIW 209
V N+ L+ L E + +TY+ L+ +YA K +I
Sbjct: 157 DVHTYNIAIAMYGKRGLLEDMERLLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEIL 216
Query: 210 KSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSD 269
+ + + Y +LSS + E ++ + K +I + +L +
Sbjct: 217 REMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENLKSKGVVP-NIVTYSAMLSLYGR 275
Query: 270 VGLTEKANEFHMLLLQKNCAP 290
GL +A + +++ C P
Sbjct: 276 HGLYTEAAKLWDEMIEAGCIP 296
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 98/248 (39%), Gaps = 9/248 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY AL+ Y ++A EL++ + + + YN + +Y G +E + +++E+
Sbjct: 125 TYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMERLLDEM 184
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K V PD TYN + A + + L EM+ + W NI ++++
Sbjct: 185 DTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWT-----YNIMLSSAR 239
Query: 166 LVN--AESSTLVEAEKSI-TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 222
AE++ L E KS +TY ++ LY G + ++W +
Sbjct: 240 KEQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCII 299
Query: 223 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 282
Y ++ SY G +E ++S D L+ A+ G +A +
Sbjct: 300 AYSGLIESYGHHGMYQEALACFQDMRKSGIVP-DTKIYTALMDAYGKAGRCREAELLYFE 358
Query: 283 LLQKNCAP 290
+ ++ P
Sbjct: 359 MTKEGFVP 366
Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 39/201 (19%), Positives = 83/201 (41%), Gaps = 4/201 (1%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
AK TY + +Y E E L + + + + + YN ++ +Y K
Sbjct: 155 AKDVHTYNIAIAMYGKRGLLEDMERLLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHE 214
Query: 101 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
++ E+ P+I+TYN+ +SS ++ + + + + G + V Y ++++Y
Sbjct: 215 ILREMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENLK-SKGVVPNIVTYSAMLSLY 273
Query: 161 ITASHLVNAESSTL-VEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 219
H + E++ L E ++ I Y LI Y G + ++ +R +
Sbjct: 274 --GRHGLYTEAAKLWDEMIEAGCIPCIIAYSGLIESYGHHGMYQEALACFQDMRKSGIVP 331
Query: 220 TSRNYICILSSYLMLGHLKEV 240
++ Y ++ +Y G +E
Sbjct: 332 DTKIYTALMDAYGKAGRCREA 352
Score = 40.8 bits (94), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 56/116 (48%), Gaps = 2/116 (1%)
Query: 46 TYTALLHLYAGAKWT-EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
TYT ++H Y K + A L E +K+S + ++YN ++ ++ G++E ++++
Sbjct: 19 TYTVIIHGYLRQKSKLDHALRLLEVMKESGKKPDEILYNCLVNGLVNSGRLEAAEKILDD 78
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
+K+ V ++ TY I A + +K EM D G S + Y L+ Y
Sbjct: 79 MKQDKVSANLVTYTNLIKEYANAGRLQDCRKLFQEMK-DKGESPNSWTYNALIQGY 133
>gi|15983487|gb|AAL11611.1|AF424618_1 AT5g04810/MUK11_13 [Arabidopsis thaliana]
Length = 950
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 95/224 (42%), Gaps = 15/224 (6%)
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTY--- 117
E+AE L +++ + +Y+ MM Y V +K +V + +K P + TY
Sbjct: 429 ERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCL 488
Query: 118 -NLW--ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTL 174
NL+ + + L + +V K + G + Y ++N ++ NA +
Sbjct: 489 INLYTKVGKISKALEVSRVMK-------EEGVKHNLKTYSMMINGFVKLKDWANA-FAVF 540
Query: 175 VEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLML 234
+ K + I Y+ +I + G+GN D+ Q K ++ + + T+R ++ I+ Y
Sbjct: 541 EDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKS 600
Query: 235 GHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 278
G ++ E+ D ++ + N L+ + EKA E
Sbjct: 601 GDMRRSLEVFDMMRRCGCVP-TVHTFNGLINGLVEKRQMEKAVE 643
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 81/195 (41%), Gaps = 2/195 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT ++ YA T KA E F R++ L + Y ++ G+++ V +E+
Sbjct: 659 TYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEM 718
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+N+ + F YN+ I A ++ + + +M G D Y + ++ A
Sbjct: 719 SARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMK-KEGVKPDIHTYTSFISACSKAGD 777
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ N + T+ E E + TY LI +A +K ++ ++ K Y
Sbjct: 778 M-NRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYH 836
Query: 226 CILSSYLMLGHLKEV 240
C+L+S L + E
Sbjct: 837 CLLTSLLSRASIAEA 851
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 44/99 (44%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 102
T T+ L++ + EKA E+ + + + +S N Y ++M Y SVG K
Sbjct: 621 TVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYF 680
Query: 103 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 141
++ + + DIFTY + +C + + EMS
Sbjct: 681 TRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMS 719
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 46/95 (48%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L++LY KA E+ +K+ + N Y+ M+ ++ + V E++
Sbjct: 484 TYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDM 543
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
++ + PD+ YN IS+ N+D+ + + EM
Sbjct: 544 VKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEM 578
>gi|302789998|ref|XP_002976767.1| hypothetical protein SELMODRAFT_105248 [Selaginella moellendorffii]
gi|300155805|gb|EFJ22436.1| hypothetical protein SELMODRAFT_105248 [Selaginella moellendorffii]
Length = 669
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 97/206 (47%), Gaps = 2/206 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T++ L++ + E+A + FER+K + + + YN ++ +Y VG+V + + E++
Sbjct: 180 TFSTLINCAKRCRQPEEALKWFERMKSEGIVPDEVTYNSVIDMYGRVGRVNEAVELYEKL 239
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K N D TY + A + + + + EM DSG S + V +N + ++ +
Sbjct: 240 KSVNWKLDTVTYGAIANVYARAGDYQSIMQLVQEMR-DSGSSPNAV-IMNTLMGTLSKAG 297
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
VN E S +T L+ +Y +G D+ +++++L+ K Y
Sbjct: 298 KVNQAKKVFNEMRTSGVSPTPVTLSILVEMYTRVGAYDQAFEVYETLKTEGWKCDVAVYN 357
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSA 251
++ + + G +++ +I+ + K++
Sbjct: 358 SLMKACVEGGRVEQAEDILKEMKRAG 383
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 66/135 (48%), Gaps = 2/135 (1%)
Query: 16 TRIDLMTKVFGIHSGERYFEGLPLS--AKTSETYTALLHLYAGAKWTEKAEELFERVKQS 73
T + ++K ++ ++ F + S + T T + L+ +Y ++A E++E +K
Sbjct: 288 TLMGTLSKAGKVNQAKKVFNEMRTSGVSPTPVTLSILVEMYTRVGAYDQAFEVYETLKTE 347
Query: 74 NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQV 133
+ +YN +M + G+VE+ +++E+KR PD TY +++ A +D
Sbjct: 348 GWKCDVAVYNSLMKACVEGGRVEQAEDILKEMKRAGCNPDHLTYRTAMNTYATKGMVDPA 407
Query: 134 KKFLDEMSCDSGGSD 148
++ D++ +G D
Sbjct: 408 RRMFDKVVALNGKPD 422
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 106/229 (46%), Gaps = 8/229 (3%)
Query: 58 KWTEKAEELFE--RVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIF 115
+W EKA FE + + N YN M+ + + Q+E +VEE+ + + PD +
Sbjct: 121 RW-EKALAFFEWLKARPELYEINRYTYNVMLKILRNGRQLELSEKLVEEMTGRGIQPDNY 179
Query: 116 TYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLV 175
T++ I+ ++ K+ + M + G D V Y +++++Y VN E+ L
Sbjct: 180 TFSTLINCAKRCRQPEEALKWFERMKSE-GIVPDEVTYNSVIDMYGRVGR-VN-EAVELY 236
Query: 176 EAEKSITQR-QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLML 234
E KS+ + +TY + +YA G+ I Q+ + +R + + ++ +
Sbjct: 237 EKLKSVNWKLDTVTYGAIANVYARAGDYQSIMQLVQEMRDSGSSPNAVIMNTLMGTLSKA 296
Query: 235 GHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 283
G + + ++ ++ + S S ++ + L+ ++ VG ++A E + L
Sbjct: 297 GKVNQAKKVFNEMRTSGVSPTPVT-LSILVEMYTRVGAYDQAFEVYETL 344
Score = 44.3 bits (103), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 44/94 (46%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y +L+ E+AE++ + +K++ + + L Y M Y + G V+ + +++
Sbjct: 356 YNSLMKACVEGGRVEQAEDILKEMKRAGCNPDHLTYRTAMNTYATKGMVDPARRMFDKVV 415
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
N PD + + I +C I+Q K DEM
Sbjct: 416 ALNGKPDTPLFTVMIRACKLAGEIEQASKIFDEM 449
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 44/249 (17%), Positives = 98/249 (39%), Gaps = 11/249 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY +L + + E +E+L E + + + ++ ++ Q E+ E +
Sbjct: 145 TYNVMLKILRNGRQLELSEKLVEEMTGRGIQPDNYTFSTLINCAKRCRQPEEALKWFERM 204
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDW----VKYVNLVNIYI 161
K + +VPD TYN I +++ + +++ S +W V Y + N+Y
Sbjct: 205 KSEGIVPDEVTYNSVIDMYGRVGRVNEAVELYEKLK-----SVNWKLDTVTYGAIANVYA 259
Query: 162 TASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 221
A + + E S + + + L+ + G ++ +++ +R + T
Sbjct: 260 RAGDY-QSIMQLVQEMRDSGSSPNAVIMNTLMGTLSKAGKVNQAKKVFNEMRTSGVSPTP 318
Query: 222 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 281
++ Y +G + E+ + K D++ N L+ A + G E+A +
Sbjct: 319 VTLSILVEMYTRVGAYDQAFEVYETLKTEGWK-CDVAVYNSLMKACVEGGRVEQAEDILK 377
Query: 282 LLLQKNCAP 290
+ + C P
Sbjct: 378 EMKRAGCNP 386
>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 935
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/202 (19%), Positives = 92/202 (45%), Gaps = 3/202 (1%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
+T +A +H ++A ++F +K+ L + Y+ +++ + G+VEK + +E
Sbjct: 525 QTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDE 584
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+ K + P+IF YN + + +I + +K D M + G D V Y +++ Y +
Sbjct: 585 MCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMP-EKGLEPDSVTYSTMIDGYCKSE 643
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
++ A S E Q Y+ L+ G+ +K +++ + + K T+ ++
Sbjct: 644 NVAEA-FSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREM-LQKGFATTLSF 701
Query: 225 ICILSSYLMLGHLKEVGEIIDQ 246
++ Y ++E ++ +
Sbjct: 702 NTLIDGYCKSCKIQEASQLFQE 723
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 100/245 (40%), Gaps = 3/245 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+Y A+++ K A +L E++ S L N ++Y+ ++ Y S G++E+ +++ +
Sbjct: 351 SYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGM 410
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
V PDIF YN IS + +++ +L E+ G D V + + Y
Sbjct: 411 SCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQ-GRGLKPDAVTFGAFILGYSKTGK 469
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ A + + + Y LI + GN + I++ L +
Sbjct: 470 MTEAAKYFDEMLDHGLMPNNPL-YTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCS 528
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 285
+ L G ++E ++ + K+ D+ + L+ F G EKA E H +
Sbjct: 529 AFIHGLLKNGRVQEALKVFSELKEKGLVP-DVFTYSSLISGFCKQGEVEKAFELHDEMCL 587
Query: 286 KNCAP 290
K AP
Sbjct: 588 KGIAP 592
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/249 (20%), Positives = 103/249 (41%), Gaps = 7/249 (2%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
S T+ L+ Y +A EL + +++ NL +A+ Y M+ + ++E
Sbjct: 314 SRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLE 373
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
++ + P++ Y+ I A+ I++ ++ LD MSC SG + D Y +++ A
Sbjct: 374 KMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSC-SGVAPDIFCYNAIISCLSKA 432
Query: 164 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 223
+ A S+ L+E + + +T+ I+ Y+ G + + + M + N
Sbjct: 433 GKMEEA-STYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFD--EMLDHGLMPNN 489
Query: 224 --YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 281
Y +++ + G+L E I D+ C+ + G ++A +
Sbjct: 490 PLYTVLINGHFKAGNLMEALSIFRHLHALGVLP-DVQTCSAFIHGLLKNGRVQEALKVFS 548
Query: 282 LLLQKNCAP 290
L +K P
Sbjct: 549 ELKEKGLVP 557
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT ++ + A E+A LF+ +++ NL + + Y +M Y +GQ +V + E++
Sbjct: 735 TYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKM 794
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
K V PD TY L I + N+ + K DE+
Sbjct: 795 VAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEV 829
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 41/205 (20%), Positives = 85/205 (41%), Gaps = 13/205 (6%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVK 71
Y +D + K I + F+G+P S TY+ ++ Y ++ +A LF +
Sbjct: 597 YNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMP 656
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
+ ++ +YN ++ G +EK + E+ +K + ++N I + I
Sbjct: 657 SKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKIQ 715
Query: 132 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWI---- 187
+ + EM D V Y +++ + A + E++ L K + +R I
Sbjct: 716 EASQLFQEMIAKQ-IMPDHVTYTTVIDWHCKAGKM--EEANLLF---KEMQERNLIVDTV 769
Query: 188 TYDFLIILYAGLGNKDKIDQIWKSL 212
TY L+ Y LG ++ +++ +
Sbjct: 770 TYTSLMYGYNKLGQSSEVFALFEKM 794
>gi|302795973|ref|XP_002979749.1| hypothetical protein SELMODRAFT_111428 [Selaginella moellendorffii]
gi|300152509|gb|EFJ19151.1| hypothetical protein SELMODRAFT_111428 [Selaginella moellendorffii]
Length = 388
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 105/249 (42%), Gaps = 10/249 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL--MYNEMMTLYMSVGQVEKVALVVE 103
TY L+ ++ + + A EL E++ S + + YN ++ + V V K ++E
Sbjct: 48 TYNTLIDVFHKLERFDSARELLEQMWDSGIRPGVMAETYNNVIASFCEVCNVRKAKGILE 107
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
+ PD+ TYN IS D + + EM + + + Y ++N +
Sbjct: 108 LMIDSGCKPDVVTYNTLISGLCKLRRADDALQLMREME----PAPNTITYNTVINGLWRS 163
Query: 164 SHLVNAESSTLVEAEKSITQRQWI-TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 222
+ E+ L++ S+ + TY+ +I +K ++ +R K +
Sbjct: 164 RK--DTEAQALLDEMISVGCPFSVSTYNCVIANLCRSREMEKAVDVFLYMRKKKCEADEV 221
Query: 223 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 282
+ ++ +L L++ G +D W A D+ + +LL A D G +KA E L
Sbjct: 222 TFATLVDGFLRDKRLEDAGGTLD-WMARAGIPSDVKSYTKLLNALCDRGSAQKACEIFNL 280
Query: 283 LLQKNCAPT 291
++ + APT
Sbjct: 281 MVDRGYAPT 289
Score = 37.4 bits (85), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 3/97 (3%)
Query: 36 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 95
G+P K+ YT LL+ +KA E+F + + + YN ++ +V
Sbjct: 250 GIPSDVKS---YTKLLNALCDRGSAQKACEIFNLMVDRGYAPTLVSYNVLLKGLCKALRV 306
Query: 96 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQ 132
E ++ E++ + + PD+ +Y I A ID+
Sbjct: 307 EHALVLFREMQEREIQPDVVSYTTVIKGLCAARRIDE 343
>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
Length = 698
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 2/129 (1%)
Query: 15 ATRIDLMTKVFGIHSGERYFEGLPLS--AKTSETYTALLHLYAGAKWTEKAEELFERVKQ 72
+T ID ++K I + R F+ + A Y+AL+H A+ + A E+ ++K+
Sbjct: 403 STMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKK 462
Query: 73 SNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQ 132
+ + + + YN ++ G VE +E+ PD++TYN+ IS N D
Sbjct: 463 AFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDA 522
Query: 133 VKKFLDEMS 141
LD+MS
Sbjct: 523 ACGVLDDMS 531
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 99/250 (39%), Gaps = 13/250 (5%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYTA+++ A K ++A L E++ + + YN ++ +G++E+ ++ +I
Sbjct: 261 TYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKI 320
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
PD+ TY I + K EM+ G + D V Y L+ +
Sbjct: 321 VDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMA-SRGLALDTVCYTALIRGLLQTGK 379
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLII--LYAGLGNKDKID---QIWKSLRMTKQKMT 220
+ A S K++T + D + + + GL +I +I+KS+
Sbjct: 380 IPQASS-----VYKTMTSHGCVP-DVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPN 433
Query: 221 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 280
Y ++ + E++ Q K++ + I+ N L+ G E A F
Sbjct: 434 EVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITY-NILIDGLCKSGDVEAARAFF 492
Query: 281 MLLLQKNCAP 290
+L+ C P
Sbjct: 493 DEMLEAGCKP 502
>gi|22330179|ref|NP_683419.1| ABA Overly-Sensitive 5 protein [Arabidopsis thaliana]
gi|75216707|sp|Q9ZU27.1|PPR76_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g51965, mitochondrial; Flags: Precursor
gi|4220445|gb|AAD12672.1| Similar to gi|3004555 F19F24.14 salt inducible protein homolog from
Arabidopsis thaliana BAC gb|AC003673 [Arabidopsis
thaliana]
gi|332194619|gb|AEE32740.1| ABA Overly-Sensitive 5 protein [Arabidopsis thaliana]
Length = 650
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 73/148 (49%), Gaps = 5/148 (3%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGL---PLSAKTSETYTALLHLYAGAKWTEKAEELFERV 70
Y+ + ++K+ + R F + P+ + ++Y ++L GA T +A E+ ++
Sbjct: 375 YSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGE-RDSYMSMLESLCGAGKTIEAIEMLSKI 433
Query: 71 KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 130
+ + + +MYN + + + Q+ + + E++K+ PDIFTYN+ I+S +
Sbjct: 434 HEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEV 493
Query: 131 DQVKKFLDEMSCDSGGSDDWVKYVNLVN 158
D+ +E+ S D + Y +L+N
Sbjct: 494 DEAINIFEELE-RSDCKPDIISYNSLIN 520
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 65/147 (44%), Gaps = 2/147 (1%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y + K +LFE++K+ S + YN ++ + VG+V++ + EE++
Sbjct: 445 YNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELE 504
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
R + PDI +YN I+ ++D+ EM + G + D V Y L+ + +
Sbjct: 505 RSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQ-EKGLNPDVVTYSTLMECF-GKTER 562
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLI 193
V S E Q +TY+ L+
Sbjct: 563 VEMAYSLFEEMLVKGCQPNIVTYNILL 589
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 103/240 (42%), Gaps = 11/240 (4%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
S TY LL Y ++ KA +++ +++ + YN ++ ++ + EK V E
Sbjct: 203 SFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLD---ALAKDEKACQVFE 259
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
++K+++ D +TY + I + D+ +EM + G + + V Y L+ + +
Sbjct: 260 DMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITE-GLTLNVVGYNTLMQV-LAK 317
Query: 164 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 223
+V+ ++ + TY L+ L G ++D + + ++K+ MT
Sbjct: 318 GKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGV---VEISKRYMTQGI 374
Query: 224 YICILSSYLMLGHLKEVGEII-DQWKQSATSDFD--ISACNRLLGAFSDVGLTEKANEFH 280
Y ++ + LGH+ E + D W + D +S L GA + E ++ H
Sbjct: 375 YSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIH 434
Score = 40.4 bits (93), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 29/140 (20%), Positives = 65/140 (46%), Gaps = 3/140 (2%)
Query: 4 HKEFVLSDSD-YATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWT 60
H++ V++D+ Y T + K+ I FE + + + TY L+ +
Sbjct: 434 HEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEV 493
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
++A +FE +++S+ + + YN ++ G V++ + +E++ K + PD+ TY+
Sbjct: 494 DEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTL 553
Query: 121 ISSCAATLNIDQVKKFLDEM 140
+ T ++ +EM
Sbjct: 554 MECFGKTERVEMAYSLFEEM 573
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 114/250 (45%), Gaps = 23/250 (9%)
Query: 35 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 94
EGL L+ Y L+ + A K +KA ++F R+ ++ N Y+ ++ L ++ GQ
Sbjct: 299 EGLTLNVVG---YNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQ 355
Query: 95 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKK-FLDEMSCDSGGSDDWVKY 153
+ ++ VV EI ++ + I++Y + + + ++ + + F D S G D Y
Sbjct: 356 LVRLDGVV-EISKRYMTQGIYSY--LVRTLSKLGHVSEAHRLFCDMWSFPVKGERD--SY 410
Query: 154 VNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLI-ILYAGLGNKDKIDQIWKSL 212
++++ A + A +E I ++ +T + +++ LG +I I
Sbjct: 411 MSMLESLCGAGKTIEA-----IEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLF 465
Query: 213 RMTKQKMTSRN---YICILSSYLMLGHLKEVGEIIDQWKQSATSDF--DISACNRLLGAF 267
K+ S + Y +++S+ G + EV E I+ +++ SD DI + N L+
Sbjct: 466 EKMKKDGPSPDIFTYNILIASF---GRVGEVDEAINIFEELERSDCKPDIISYNSLINCL 522
Query: 268 SDVGLTEKAN 277
G ++A+
Sbjct: 523 GKNGDVDEAH 532
>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
Length = 851
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/210 (20%), Positives = 94/210 (44%), Gaps = 6/210 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L+ + +K F ++++ N + YN ++ Y +G++++ +++ +
Sbjct: 12 TYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSM 71
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K + P++ +YN+ I+ ++ + + L+EM G + D V Y L+N Y
Sbjct: 72 SSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGY-KGFTPDEVTYNTLLNGYCKEG- 129
Query: 166 LVNAESSTLVEAE--KSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 223
N + ++ AE ++ +TY LI N ++ + + +R+ + R
Sbjct: 130 --NFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERT 187
Query: 224 YICILSSYLMLGHLKEVGEIIDQWKQSATS 253
Y ++ + G L E I+++ +S S
Sbjct: 188 YTTLIDGFSRQGLLNEAYRILNEMTESGFS 217
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 75/164 (45%), Gaps = 8/164 (4%)
Query: 1 MVTHKEFV---LSDS--DYATRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHL 53
+V H E V +S S Y I+ M K ++ +F+ + + TYT L+
Sbjct: 135 LVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDG 194
Query: 54 YAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPD 113
++ +A + + +S S + + YN + + + ++E+ VV+E+ K + PD
Sbjct: 195 FSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPD 254
Query: 114 IFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 157
+ +Y+ IS +D+ + EM + G S D V Y +L+
Sbjct: 255 VVSYSTIISGFCRKGELDRAFQMKQEM-VEKGVSPDAVTYSSLI 297
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 64/148 (43%), Gaps = 2/148 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+Y +++ ++A E+ E + + + + YN ++ Y G + ++ E+
Sbjct: 82 SYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEM 141
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
R V P + TY I+S N+++ +F D+M G + Y L++ + +
Sbjct: 142 VRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRI-RGLRPNERTYTTLIDGF-SRQG 199
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLI 193
L+N L E +S +TY+ I
Sbjct: 200 LLNEAYRILNEMTESGFSPSVVTYNAFI 227
>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
Length = 688
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 96/215 (44%), Gaps = 5/215 (2%)
Query: 35 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 94
G+P +A TY+ +LH + ++A +LF+ + N+ N L ++ ++ G
Sbjct: 402 RGIPPNA---VTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGM 458
Query: 95 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 154
V + V E + K V P+I+TYN ++ +++ +K E+ G + D Y
Sbjct: 459 VSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVF-EIMVGKGCAPDLHSYN 517
Query: 155 NLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM 214
L+N Y + + A++ + K +T +TY+ ++ +G +++K +
Sbjct: 518 ILINGYCNSRRMDKAKALLTQMSVKKLTPNT-VTYNTIMKGLCYVGRLLDAQELFKKMCS 576
Query: 215 TKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQ 249
+ T Y +L+ GHL E ++ K+
Sbjct: 577 SGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKE 611
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 98/248 (39%), Gaps = 9/248 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+T L++ + A EL+ + +S + + YN ++ + G V +++
Sbjct: 165 TFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKM 224
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
++ P++ TYN I S ++ FL EM G D + Y ++V+
Sbjct: 225 EQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEM-VGRGIPPDAITYNSIVHGLCCLGQ 283
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLI-ILYAGLGNKDKIDQIWKSLRMTKQKMTSR-- 222
L N + E++ + +TY+ +I LY D D + + M Q +
Sbjct: 284 L-NEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSE---MVDQGIPPDVV 339
Query: 223 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 282
Y IL LG L E + + +Q D+ A N ++ + L A EF
Sbjct: 340 TYTTILHGLCYLGQLNEAIRLFKKMEQKGCKP-DVVAYNTIIDSLCKDRLVNDAMEFLSE 398
Query: 283 LLQKNCAP 290
++ + P
Sbjct: 399 MVDRGIPP 406
Score = 37.4 bits (85), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 34/205 (16%), Positives = 80/205 (39%), Gaps = 2/205 (0%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y ++ + A E + + NA+ Y+ ++ + ++GQ+++ + +E+
Sbjct: 376 YNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMV 435
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
+NV+P+ T+++ + + + + + M+ + G + Y L+N Y +
Sbjct: 436 GRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMT-EKGVEPNIYTYNALMNGYCLRCKM 494
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 226
A + K +Y+ LI Y DK + + + K + Y
Sbjct: 495 NEARKVFEIMVGKGCAP-DLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNT 553
Query: 227 ILSSYLMLGHLKEVGEIIDQWKQSA 251
I+ +G L + E+ + S
Sbjct: 554 IMKGLCYVGRLLDAQELFKKMCSSG 578
>gi|9758456|dbj|BAB08985.1| membrane-associated salt-inducible protein-like [Arabidopsis
thaliana]
Length = 949
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 86/195 (44%), Gaps = 14/195 (7%)
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTY--- 117
E+AE L +++ + +Y+ MM Y V +K +V + +K P + TY
Sbjct: 431 ERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCL 490
Query: 118 -NLW--ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTL 174
NL+ + + L + +V K + G + Y ++N ++ NA +
Sbjct: 491 INLYTKVGKISKALEVSRVMK-------EEGVKHNLKTYSMMINGFVKLKDWANA-FAVF 542
Query: 175 VEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLML 234
+ K + I Y+ +I + G+GN D+ Q K ++ + + T+R ++ I+ Y
Sbjct: 543 EDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKS 602
Query: 235 GHLKEVGEIIDQWKQ 249
G ++ E+ D ++
Sbjct: 603 GDMRRSLEVFDMMRR 617
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 81/195 (41%), Gaps = 2/195 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT ++ YA T KA E F R++ L + Y ++ G+++ V +E+
Sbjct: 658 TYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEM 717
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+N+ + F YN+ I A ++ + + +M G D Y + ++ A
Sbjct: 718 SARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMK-KEGVKPDIHTYTSFISACSKAGD 776
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ N + T+ E E + TY LI +A +K ++ ++ K Y
Sbjct: 777 M-NRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYH 835
Query: 226 CILSSYLMLGHLKEV 240
C+L+S L + E
Sbjct: 836 CLLTSLLSRASIAEA 850
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 46/95 (48%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L++LY KA E+ +K+ + N Y+ M+ ++ + V E++
Sbjct: 486 TYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDM 545
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
++ + PD+ YN IS+ N+D+ + + EM
Sbjct: 546 VKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEM 580
>gi|42567647|ref|NP_568141.2| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|122223689|sp|Q0WMY5.1|PP365_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g04810, chloroplastic; AltName: Full=Maize PPR4
homolog; Short=AtPPR4; Flags: Precursor
gi|110739199|dbj|BAF01515.1| membrane-associated salt-inducible protein-like [Arabidopsis
thaliana]
gi|332003406|gb|AED90789.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 952
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 95/224 (42%), Gaps = 15/224 (6%)
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTY--- 117
E+AE L +++ + +Y+ MM Y V +K +V + +K P + TY
Sbjct: 431 ERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCL 490
Query: 118 -NLW--ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTL 174
NL+ + + L + +V K + G + Y ++N ++ NA +
Sbjct: 491 INLYTKVGKISKALEVSRVMK-------EEGVKHNLKTYSMMINGFVKLKDWANA-FAVF 542
Query: 175 VEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLML 234
+ K + I Y+ +I + G+GN D+ Q K ++ + + T+R ++ I+ Y
Sbjct: 543 EDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKS 602
Query: 235 GHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 278
G ++ E+ D ++ + N L+ + EKA E
Sbjct: 603 GDMRRSLEVFDMMRRCGCVP-TVHTFNGLINGLVEKRQMEKAVE 645
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 81/195 (41%), Gaps = 2/195 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT ++ YA T KA E F R++ L + Y ++ G+++ V +E+
Sbjct: 661 TYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEM 720
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+N+ + F YN+ I A ++ + + +M G D Y + ++ A
Sbjct: 721 SARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMK-KEGVKPDIHTYTSFISACSKAGD 779
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ N + T+ E E + TY LI +A +K ++ ++ K Y
Sbjct: 780 M-NRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYH 838
Query: 226 CILSSYLMLGHLKEV 240
C+L+S L + E
Sbjct: 839 CLLTSLLSRASIAEA 853
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 44/99 (44%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 102
T T+ L++ + EKA E+ + + + +S N Y ++M Y SVG K
Sbjct: 623 TVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYF 682
Query: 103 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 141
++ + + DIFTY + +C + + EMS
Sbjct: 683 TRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMS 721
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 46/95 (48%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L++LY KA E+ +K+ + N Y+ M+ ++ + V E++
Sbjct: 486 TYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDM 545
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
++ + PD+ YN IS+ N+D+ + + EM
Sbjct: 546 VKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEM 580
>gi|15229734|ref|NP_187743.1| Pentatricopeptide repeat-containing protein-like protein
[Arabidopsis thaliana]
gi|12322893|gb|AAG51431.1|AC008153_4 hypothetical protein; 1030-2613 [Arabidopsis thaliana]
gi|332641512|gb|AEE75033.1| Pentatricopeptide repeat-containing protein-like protein
[Arabidopsis thaliana]
Length = 359
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 12/137 (8%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M+ HK L D++ R L+ V G+ E+YFE +P + + YTALL Y AK +
Sbjct: 66 MIEHKICCLVPEDFSARFQLIENVLGLEEAEKYFESIPENLRGESLYTALLRSY--AKRS 123
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
EK + +R + ++ + + S G +KV + E+K N+ D T N
Sbjct: 124 EK--KYLDRASRIHIQEDERI--------SSFGTRDKVDESLREMKESNIDLDRLTVNKA 173
Query: 121 ISSCAATLNIDQVKKFL 137
+ AA ++ +++FL
Sbjct: 174 LRVYAAASDVAAMERFL 190
>gi|242062226|ref|XP_002452402.1| hypothetical protein SORBIDRAFT_04g025130 [Sorghum bicolor]
gi|241932233|gb|EES05378.1| hypothetical protein SORBIDRAFT_04g025130 [Sorghum bicolor]
Length = 506
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/246 (19%), Positives = 95/246 (38%), Gaps = 6/246 (2%)
Query: 38 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 97
P A + T+ +H + + ++A E +K + Y ++ Y +
Sbjct: 219 PHIAPDAYTFNIFVHGWCSVRRIDEAMWTIEEMKNRGFPPIVITYTAVLEAYCKQRNFRR 278
Query: 98 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 157
V +++ + + P++ TY + ++S ++ D M SG D + Y L+
Sbjct: 279 VYEILDSMSSQGCHPNVITYTMIMTSLTKCERFEEALSVSDRMK-SSGCKPDTLFYNALI 337
Query: 158 NIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 217
N+ A HL A VE +++ R TY+ +I + G D + K +
Sbjct: 338 NLLGRAGHLFEANQVFRVEMPRNVVPRNVATYNTMISILCQYGRDDDALDVLKEMEAQSC 397
Query: 218 KMTSRNYICILSSYLMLGHLKEVGEI---IDQWKQSATSDFDISACNRLLGAFSDVGLTE 274
K + Y +L L+ G + G I + + + D+ L+ VG T+
Sbjct: 398 KPDLQTYQPLLR--LLFGRRGQTGAIHHLLSELRDRNGLGLDLDTYTLLIHGLCRVGETD 455
Query: 275 KANEFH 280
A + +
Sbjct: 456 WAYQLY 461
>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
Length = 754
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 105/253 (41%), Gaps = 10/253 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+Y ALLH YA A + LF + + + ++N ++ Y +G ++K L+ E++
Sbjct: 295 SYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDM 354
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
++ V PDI T++ IS+ +D + + M D+G D Y L+
Sbjct: 355 TKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHM-IDTGVPPDTAVYSCLIQGQCNRRD 413
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG----NKDKIDQIWKSLRMTKQKMTS 221
LV A+ K I + +I G KD +D I T Q+
Sbjct: 414 LVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIH----TGQRPNL 469
Query: 222 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 281
+ ++ Y ++G++KE ++D +S + DI N L+ + G + A
Sbjct: 470 ITFNSLVDGYCLVGNMKEAVGLLDSM-ESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFR 528
Query: 282 LLLQKNCAPTNAS 294
+L K T+ S
Sbjct: 529 DMLHKRVTLTSVS 541
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 103/227 (45%), Gaps = 15/227 (6%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY++L++ K +KAE + ++ + + N + YN ++ Y + G ++ V +E+
Sbjct: 190 TYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEM 249
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+VPD+ N ++++ I + + D M G D + Y L++ Y TA
Sbjct: 250 SSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVL-KGPKPDVISYGALLHGYATAGC 308
Query: 166 LVNAES-STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR-- 222
+ ++ ++ E + R ++ LI YA LG DK +++ MTKQ +
Sbjct: 309 IAGMDNLFNVMVCEGVVPDRH--VFNTLINAYARLGMMDKSLLMFED--MTKQGVNPDII 364
Query: 223 NYICILSSYLMLGHLKEVGE----IIDQWKQSATSDFDI---SACNR 262
+ ++S++ LG L + E +ID T+ + CNR
Sbjct: 365 TFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNR 411
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 66/127 (51%), Gaps = 1/127 (0%)
Query: 38 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 97
P +A T TY L++ Y A+ + +F R+ ++ L + YN ++ + G+V+K
Sbjct: 112 PEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDK 171
Query: 98 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 157
+ +++ + ++P++ TY+ I+ T +D+ ++ L +M +G + + Y L+
Sbjct: 172 AHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQM-VGAGVRPNNMTYNCLI 230
Query: 158 NIYITAS 164
+ Y T+
Sbjct: 231 HGYSTSG 237
>gi|242086476|ref|XP_002443663.1| hypothetical protein SORBIDRAFT_08g023090 [Sorghum bicolor]
gi|241944356|gb|EES17501.1| hypothetical protein SORBIDRAFT_08g023090 [Sorghum bicolor]
Length = 853
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 74/159 (46%), Gaps = 3/159 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L+ ++A A + + A +L+ R+++ LS + Y+ M+ GQ+ + E+
Sbjct: 432 TYCTLIDIHAKAGYLDIAMDLYGRMQEVGLSPDTFTYSAMVNCLGKGGQLAAAYKLFCEM 491
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
P++ TYN+ I+ A N + V K +M +G D + Y ++ + H
Sbjct: 492 IENGCTPNLVTYNIMIALQAKARNYENVVKLYKDMQV-AGFRPDKITYSIVMEVLGHCGH 550
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDK 204
L AE + +E + + + Y L+ L+ GN DK
Sbjct: 551 LDEAE-AVFIEMRRDWAPDEPV-YGLLVDLWGKAGNVDK 587
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/247 (19%), Positives = 96/247 (38%), Gaps = 4/247 (1%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
TYT ++ + A+ ++L + + +++ + YN ++ Y +++ V E
Sbjct: 360 GHTYTTMIGILGQARQFGVLKKLLDEMSRAHCKPTVVTYNRIIHAYGRANYLKEAVKVFE 419
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
E++ PD TY I A +D M + G S D Y +VN
Sbjct: 420 EMQEAGYEPDRVTYCTLIDIHAKAGYLDIAMDLYGRMQ-EVGLSPDTFTYSAMVNCLGKG 478
Query: 164 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 223
L A E T +TY+ +I L A N + + +++K +++ +
Sbjct: 479 GQLAAAYKLFCEMIENGCTP-NLVTYNIMIALQAKARNYENVVKLYKDMQVAGFRPDKIT 537
Query: 224 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 283
Y ++ GHL E + + ++ D + L+ + G +KA ++ +
Sbjct: 538 YSIVMEVLGHCGHLDEAEAVFIEMRRDWAPDEPVYGL--LVDLWGKAGNVDKALGWYQAM 595
Query: 284 LQKNCAP 290
LQ P
Sbjct: 596 LQDGLQP 602
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 45/232 (19%), Positives = 101/232 (43%), Gaps = 24/232 (10%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY ++H Y A + ++A ++FE ++++ + + Y ++ ++ G ++ + +
Sbjct: 397 TYNRIIHAYGRANYLKEAVKVFEEMQEAGYEPDRVTYCTLIDIHAKAGYLDIAMDLYGRM 456
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ + PD FTY+ ++ + K EM ++G + + V Y ++ + A +
Sbjct: 457 QEVGLSPDTFTYSAMVNCLGKGGQLAAAYKLFCEM-IENGCTPNLVTYNIMIALQAKARN 515
Query: 166 LVNAESSTLVEAEKSIT----QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 221
N +V+ K + + ITY ++ + G+ D+ + ++ +R
Sbjct: 516 YEN-----VVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMR-------- 562
Query: 222 RNYICILSSYLMLGHLKEVGEIIDQ---WKQSATSD---FDISACNRLLGAF 267
R++ Y +L L +D+ W Q+ D ++ CN LL AF
Sbjct: 563 RDWAPDEPVYGLLVDLWGKAGNVDKALGWYQAMLQDGLQPNVPTCNSLLSAF 614
Score = 37.0 bits (84), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 19/84 (22%), Positives = 41/84 (48%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
A Y L+ L+ A +KA ++ + Q L N N +++ ++ + + + +
Sbjct: 566 APDEPVYGLLVDLWGKAGNVDKALGWYQAMLQDGLQPNVPTCNSLLSAFLKMNRFQDAYI 625
Query: 101 VVEEIKRKNVVPDIFTYNLWISSC 124
V++ + + +VP + TY L +S C
Sbjct: 626 VLQNMLAQGLVPSVQTYTLLLSCC 649
>gi|255552099|ref|XP_002517094.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543729|gb|EEF45257.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 549
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 52/103 (50%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT +H AK KA E++E +K + +A Y+ ++ + G+++ V E++
Sbjct: 341 TYTIFMHALGKAKQVNKALEVYEMMKSNCCVPDASFYSSLIFVLTQSGRLKDAWDVFEDM 400
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSD 148
K++ V PD+ TYN I+S L + K L M DS D
Sbjct: 401 KKQGVSPDLLTYNTMITSACTHLEEENALKLLRRMEEDSCKPD 443
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/127 (21%), Positives = 57/127 (44%), Gaps = 5/127 (3%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
+++ LLH Y A+ + A ++ + + + N + Y + LY + V + E
Sbjct: 270 QSFNILLHGYCKARKLDDARKIMDEMDKQGFQPNVVSYTCFIELYCKLKDFRNVEAIFSE 329
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLD--EMSCDSGGSDDWVKYVNLVNIYIT 162
++ K+ P++ TY +++ + QV K L+ EM + D Y +L+ +
Sbjct: 330 MQEKSCKPNVITYTIFMHALGKA---KQVNKALEVYEMMKSNCCVPDASFYSSLIFVLTQ 386
Query: 163 ASHLVNA 169
+ L +A
Sbjct: 387 SGRLKDA 393
>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic [Vitis vinifera]
gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
Length = 1113
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/208 (19%), Positives = 90/208 (43%), Gaps = 2/208 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+Y L+HL + + +A +++ R+ + + Y+ +M +E V +++E+
Sbjct: 194 SYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEM 253
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ + P+I+T+ + I ID+ L M D+G D V Y L++ A
Sbjct: 254 ESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMD-DAGCGPDVVTYTVLIDALCNAGK 312
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
L NA+ ++ + S + +TY L+ ++ G+ D I + W + +
Sbjct: 313 LNNAK-ELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFT 371
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATS 253
++ + +G + E +D K+ +
Sbjct: 372 ILIDALCKVGKVDEAFGTLDVMKKQGVA 399
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 87/201 (43%), Gaps = 4/201 (1%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLP--LSAKTSETYTALLHLYAGAKWTEKAEELFERVK 71
Y ID + K+ + +++FE + Y L++ + E A ELF R+
Sbjct: 896 YGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMV 955
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
+ + + Y+ M+ VG+V+ EE+K + PD+ YNL I+ + ++
Sbjct: 956 KEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVE 1015
Query: 132 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 191
+ DEM + G + D Y L+ + + + +V E + + TY+
Sbjct: 1016 EALSLFDEMR-NRGITPDLYTYNALI-LNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNA 1073
Query: 192 LIILYAGLGNKDKIDQIWKSL 212
LI ++ GN D+ ++K +
Sbjct: 1074 LIRGHSMSGNPDRAYAVYKKM 1094
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 125/326 (38%), Gaps = 50/326 (15%)
Query: 7 FVLSDSDYATRIDLMTKVFGIHSGERYF-----EGLPLSAKTSETYTALLHLYAGAKWTE 61
FVL+ Y I L+ K + + EG+ S KT Y+AL+ + E
Sbjct: 188 FVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKT---YSALMVALGKRRDIE 244
Query: 62 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 121
L + ++ L N + + + G++++ +++ + PD+ TY + I
Sbjct: 245 TVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLI 304
Query: 122 SS-C-AATLN---------------------------------IDQVKKFLDEMSCDSGG 146
+ C A LN +D +K+F EM D G
Sbjct: 305 DALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEAD-GY 363
Query: 147 SDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKID 206
D V + L++ V+ TL +K TY+ LI L D+
Sbjct: 364 LPDVVTFTILIDALCKVGK-VDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEAL 422
Query: 207 QIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDF--DISACNRLL 264
+++ S+ + T+ YI + Y G E G+ I +++ T+ +I ACN L
Sbjct: 423 ELFNSMESLGLETTAYTYILFIDYY---GKSGESGKAIKTFEKMKTNGIVPNIVACNASL 479
Query: 265 GAFSDVGLTEKANEFHMLLLQKNCAP 290
+ ++ G E+A EF L + AP
Sbjct: 480 YSLAEQGRLEEAKEFFNGLKKCGLAP 505
Score = 44.3 bits (103), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 71/165 (43%), Gaps = 5/165 (3%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 102
T+ TY + Y + + KA + FE++K + + N + N + G++E+
Sbjct: 436 TAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFF 495
Query: 103 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 162
+K+ + PD TYN+ + +D K L EM + G D V +N + +
Sbjct: 496 NGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEM--EENGCDPEVVIINSLIDTLY 553
Query: 163 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQ 207
+ V+ ++ +TY+ L+ AGLG + ++ +
Sbjct: 554 KADRVDEAWKMFQRMKEMKLAPTVVTYNTLL---AGLGKEGRVQE 595
>gi|356561685|ref|XP_003549110.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 477
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 92/225 (40%), Gaps = 4/225 (1%)
Query: 2 VTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSET--YTALLHLYAGAKW 59
V + F L Y T I+ + K + R L + + YT ++H K
Sbjct: 189 VVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKR 248
Query: 60 TEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNL 119
A +L+ + +S N YN ++ + +G +++ ++ E+K KN+ PD++T+N+
Sbjct: 249 VGDACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNI 308
Query: 120 WISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK 179
I + ID+ +EM + V Y +L++ HL A + E+
Sbjct: 309 LIDALGKEGKIDEAISLFEEMK-HKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQ 367
Query: 180 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
I Q +Y L+ G + Q ++ L + + R Y
Sbjct: 368 GI-QPDVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTY 411
>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
Length = 1320
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 106/233 (45%), Gaps = 9/233 (3%)
Query: 62 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 121
+AE+L +++ + + ++Y +++ + +G V + +E++RK +VPDI TY I
Sbjct: 330 EAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVI 389
Query: 122 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI 181
+ + + ++ +EM G D V Y L++ Y A + A S +K +
Sbjct: 390 HGICKSGKMVEAREMFNEMLV-KGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGL 448
Query: 182 TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN---YICILSSYLMLGHLK 238
T +TY L GL +ID + L +K N Y I++ +G+++
Sbjct: 449 TPNV-VTYT---ALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIE 504
Query: 239 EVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 291
+ +++++ + D L+ A+ +G KA+E ++L K PT
Sbjct: 505 QTVKLMEEMDLAGFYP-DTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPT 556
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 71/148 (47%), Gaps = 2/148 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYTAL+ Y A ++A + ++ Q L+ N + Y + G+++ ++ E+
Sbjct: 419 TYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEM 478
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
RK + P+++TYN ++ NI+Q K ++EM +G D + Y L++ Y
Sbjct: 479 SRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDL-AGFYPDTITYTTLMDAYCKMGE 537
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLI 193
+ A + K + Q +T++ L+
Sbjct: 538 MAKAHELLRIMLNKRL-QPTLVTFNVLM 564
Score = 44.7 bits (104), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 110/266 (41%), Gaps = 26/266 (9%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT+++H + +A E+F + L + + Y ++ Y G++++ V ++
Sbjct: 384 TYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQM 443
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+K + P++ TY ID + L EMS G + Y +VN
Sbjct: 444 VQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMS-RKGLQPNVYTYNTIVN---GLCK 499
Query: 166 LVNAESSTLVEAEKSIT--QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 223
+ N E + + E + ITY L+ Y +G K ++ + + + + T
Sbjct: 500 IGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVT 559
Query: 224 YICILSSYLMLGHLKEVGEIIDQW-----------------KQSATSDFDISACNRLLGA 266
+ +++ + M G L++ GE + +W KQ + ++ A + A
Sbjct: 560 FNVLMNGFCMSGMLED-GERLIEWMLEKGIMPNATTFNSLMKQYCIKN-NMRATTEIYKA 617
Query: 267 FSDVGLTEKANEFHMLLLQKNCAPTN 292
D G+ +N ++ +L++ +C N
Sbjct: 618 MHDRGVMPDSNTYN-ILIKGHCKARN 642
>gi|449467657|ref|XP_004151539.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Cucumis sativus]
Length = 637
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY+AL+ + + + A LF+ +K++ L +Y ++ +Y + +VE +VEE+
Sbjct: 232 TYSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEM 291
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K K P +FTY I +D M D G D V NL+NI A
Sbjct: 292 KGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKD-GCKPDVVLINNLINILGRAGR 350
Query: 166 LVNA 169
L +A
Sbjct: 351 LEDA 354
Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 73/173 (42%), Gaps = 7/173 (4%)
Query: 38 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 97
P S +E ++ +L + AK KA +F ++K + A +YN ++ + M G EK
Sbjct: 154 PCSVGPAE-WSEILKILGKAKMVNKALSVFYQIKGRKCNPTATVYNTLILMLMHEGHHEK 212
Query: 98 VALVVEEI-KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 156
+ + EI N PD TY+ IS+ D + DEM ++G Y +
Sbjct: 213 IHELYNEICSEGNCSPDTITYSALISAFGKLERYDFAFRLFDEMK-ENGLHPTEKIYTTI 271
Query: 157 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIW 209
+ +Y + V A + E + TY LI GLG ++D +
Sbjct: 272 LAMYFKLNK-VEAALRLVEEMKGKGCAPTVFTYTELI---KGLGKVGRVDDAY 320
Score = 44.3 bits (103), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 59/123 (47%), Gaps = 5/123 (4%)
Query: 35 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 94
+G P Y +L+ AK E A ELF+ +K++ +A +Y M+ + + G+
Sbjct: 435 KGFP---PCPAAYCSLIDSLGRAKRYEAANELFQELKENCGRSSARVYAVMIKHFGNCGR 491
Query: 95 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 154
+ + E+K+ PD++TYN +S ID+ + M ++G + D +K
Sbjct: 492 LSDAVDLFCEMKKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMR-ENGCTPD-IKSH 549
Query: 155 NLV 157
N++
Sbjct: 550 NII 552
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 84/210 (40%), Gaps = 3/210 (1%)
Query: 67 FERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAA 126
FE++K + ++ ++ Y ++ + +VEK L++EE+ K P Y I S
Sbjct: 394 FEKMKANGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGR 453
Query: 127 TLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQW 186
+ + E+ + G S V Y ++ + L +A E +K
Sbjct: 454 AKRYEAANELFQELKENCGRSSARV-YAVMIKHFGNCGRLSDA-VDLFCEMKKLGCSPDV 511
Query: 187 ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 246
TY+ L+ G D+ + +++R +++ IL+ G K E+ +
Sbjct: 512 YTYNALMSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTK 571
Query: 247 WKQSATSDFDISACNRLLGAFSDVGLTEKA 276
K+S D + N +L S G+ E A
Sbjct: 572 MKESEIMP-DAVSYNTILSCLSRAGMFEMA 600
>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Vitis vinifera]
Length = 819
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 108/247 (43%), Gaps = 7/247 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
Y ++ K + AE+LF+ + ++ N + YN ++ Y VGQ+E+ + E +
Sbjct: 219 VYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERM 278
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K +NV P I T+N ++ +++ ++ L+EM G D Y L + ++
Sbjct: 279 KVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEV-YGFVPDRFTYTTLFDGHLKCG- 336
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGL--GNKDKIDQIWKSLRMTKQKMTSRN 223
N ++S + E Q + Y I+L A GN +K +++ K
Sbjct: 337 --NVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVF 394
Query: 224 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 283
+ I++ Y +G + + I++ + ++ N L+ F ++ E+A + +
Sbjct: 395 FNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTY-NSLVKKFCEMKNMEEAEKCIKKM 453
Query: 284 LQKNCAP 290
++K P
Sbjct: 454 VEKGVLP 460
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 105/237 (44%), Gaps = 14/237 (5%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L++ +AE L + + LSF+ + YN +++ Y S G V+K + E +
Sbjct: 569 TYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETM 628
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K+ + P + TY+ I+ C + V+K EM D V Y L++ Y+
Sbjct: 629 KKSGIKPTLNTYHRLIAGCGKE-GLVLVEKIYQEM-LQMNLVPDRVIYNALIHCYVEHGD 686
Query: 166 LVNAES-STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
+ A S + +EA+ Q +TY+ LI+ + G K+ + +++ + Y
Sbjct: 687 VQKACSLHSAMEAQG--IQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETY 744
Query: 225 ICILSSYLMLGH--LKEVGEIIDQWKQSATSDF--DISACNRLLGAFSDVGLTEKAN 277
L++GH LK+ +++ + F +S C+ L+ + G + A+
Sbjct: 745 -----DILIVGHCKLKDFDGAYVWYREMFENGFTPSVSICDNLITGLREEGRSHDAD 796
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 96/212 (45%), Gaps = 33/212 (15%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY +L+ + K E+AE+ +++ + + N YN ++ Y ++ ++EE+
Sbjct: 429 TYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEM 488
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM------------------SCDSGGS 147
++K + P++ +Y I+ NI + + L +M SC +G
Sbjct: 489 EKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKL 548
Query: 148 DDWVKYVN------LVNIYITASHLVNA--ESSTLVEAEK---SITQRQW----ITYDFL 192
D ++ + +V +T + L+N + ++EAE IT++ ITY+ L
Sbjct: 549 KDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSL 608
Query: 193 IILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
I Y+ GN K +++++++ + K T Y
Sbjct: 609 ISGYSSAGNVQKALELYETMKKSGIKPTLNTY 640
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 97/241 (40%), Gaps = 17/241 (7%)
Query: 58 KWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTY 117
K E +LF + +S L + MY + + + +G +++ ++ +KR V P +F Y
Sbjct: 161 KRYEDTLQLFSEIVESGLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVY 220
Query: 118 NLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA 177
N+ I + +K DEM D + + + Y L++ Y L E
Sbjct: 221 NVVIGGLCKEKRMKDAEKLFDEM-LDRRVAPNRITYNTLIDGYCKVGQL---------EE 270
Query: 178 EKSITQRQWI-TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLML-- 234
+I +R + + II + L N Q+ + + ++M ++ +Y L
Sbjct: 271 AFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFD 330
Query: 235 GHLK--EVGEIIDQWKQSATSDFDI--SACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
GHLK V I +++ I C+ LL A G EKA E L+ AP
Sbjct: 331 GHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAP 390
Query: 291 T 291
Sbjct: 391 V 391
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 105/252 (41%), Gaps = 17/252 (6%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
+ +++ Y KA E+++ L N + YN ++ + + +E+ ++++
Sbjct: 395 FNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMV 454
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
K V+P++ TYN I + D+ + L+EM G + + Y L+N +++
Sbjct: 455 EKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEME-KKGLKPNVISYGCLINCLCKDANI 513
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 226
+ AE + + I Y+ LI G K+ ++ +M +R +
Sbjct: 514 LEAEVILGDMVHRGVVPNAQI-YNMLI---DGSCIAGKLKDAFRFF----DEMVAREIVP 565
Query: 227 ILSSYLML-------GHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 279
L +Y +L G + E + + + S FD+ N L+ +S G +KA E
Sbjct: 566 TLVTYNILINGLCKKGKVMEAENLASEITRKGLS-FDVITYNSLISGYSSAGNVQKALEL 624
Query: 280 HMLLLQKNCAPT 291
+ + + PT
Sbjct: 625 YETMKKSGIKPT 636
>gi|357115900|ref|XP_003559723.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like, partial [Brachypodium distachyon]
Length = 907
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/232 (19%), Positives = 99/232 (42%), Gaps = 2/232 (0%)
Query: 63 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 122
A + + +++ L N + Y+ +M Y +GQ E ++ ++ K + P++ TY L +
Sbjct: 183 AADFLKEMEEMGLDVNLVAYHAVMDGYCRIGQTEVARKLLHSLQVKGLSPNVVTYTLLVK 242
Query: 123 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT 182
+++ +K + E+ + D V Y L+N Y + +A + E +
Sbjct: 243 GYCKEGRMEEAEKVVKEIKENEKIVIDEVAYGALINGYCQRGRMEDA-NRVRDEMIDAGV 301
Query: 183 QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 242
Q Y+ +I Y LG +++++ ++ + +Y ++ Y G + + E
Sbjct: 302 QVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFE 361
Query: 243 IIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
D ++ + ++ N LL F G + A + L+L++ P S
Sbjct: 362 TCDMMVRNGFTGTTLTY-NTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEIS 412
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 84/185 (45%), Gaps = 2/185 (1%)
Query: 62 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 121
K + E + N +M+N ++ +G+V + E++K K +PD FTY+ I
Sbjct: 629 KVAHIIESLAGGNHQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLI 688
Query: 122 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI 181
C+A+ +ID DEM + + + V Y +L+ + ++ A S K I
Sbjct: 689 HGCSASGSIDLAFGLRDEM-LSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGI 747
Query: 182 TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVG 241
+ ITY+ LI + GN + ++ + + + T Y ++ G+++E
Sbjct: 748 SPNA-ITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAI 806
Query: 242 EIIDQ 246
+++DQ
Sbjct: 807 KLLDQ 811
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/131 (20%), Positives = 64/131 (48%), Gaps = 4/131 (3%)
Query: 39 LSAKTSE---TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 95
LSA+ + TY +L++ + +A LF +++ +S NA+ YN ++ + G
Sbjct: 708 LSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNT 767
Query: 96 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 155
+ + +++ ++ + P +FTY + I +++ K LD+M ++ +++ Y
Sbjct: 768 TEAFKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQM-IENNVDPNFITYWT 826
Query: 156 LVNIYITASHL 166
L+ Y ++
Sbjct: 827 LIQGYARCGNM 837
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 46/227 (20%), Positives = 91/227 (40%), Gaps = 15/227 (6%)
Query: 21 MTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLSFN 78
+ K+ + FE L + + TY++L+H + + + A L + + + L+ N
Sbjct: 656 LCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPN 715
Query: 79 ALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLD 138
+ YN ++ V + + +++ K + P+ TYN I N + K
Sbjct: 716 IVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQ 775
Query: 139 EMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAG 198
+M G Y L++ T ++ A L + ++ +ITY LI YA
Sbjct: 776 KM-IKEGIQPTVFTYTILIHGLCTQGYMEEA-IKLLDQMIENNVDPNFITYWTLIQGYAR 833
Query: 199 LGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIID 245
GN I +++ + +IC L GH+K+ +++
Sbjct: 834 CGNMKAITKLYNEM-----------HICGLLPANWTGHVKQAEPVVN 869
Score = 37.4 bits (85), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 35/205 (17%), Positives = 81/205 (39%), Gaps = 2/205 (0%)
Query: 74 NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQV 133
+ SF+A ++ ++ + GQ++ V +E+ + + + N ++ +I
Sbjct: 89 DFSFSAASFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTA 148
Query: 134 KKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLI 193
+M C DD+ + + Y + +A + L E E+ + Y ++
Sbjct: 149 VAVFQQMRCAGTLPDDFTVAI-MAKAYCRDGRVAHA-ADFLKEMEEMGLDVNLVAYHAVM 206
Query: 194 ILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATS 253
Y +G + ++ SL++ Y ++ Y G ++E +++ + K++
Sbjct: 207 DGYCRIGQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKI 266
Query: 254 DFDISACNRLLGAFSDVGLTEKANE 278
D A L+ + G E AN
Sbjct: 267 VIDEVAYGALINGYCQRGRMEDANR 291
>gi|15226583|ref|NP_179165.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216226|sp|Q9ZQF1.1|PP152_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g15630, mitochondrial; Flags: Precursor
gi|4335729|gb|AAD17407.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330251331|gb|AEC06425.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 627
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 69/138 (50%), Gaps = 5/138 (3%)
Query: 23 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 82
K F +H E +G+ T TYT+L+++ T +A+ELFE+V + + +M
Sbjct: 415 KAFALHD-EMMTDGI---QPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMM 470
Query: 83 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 142
N +M + ++G +++ +++E+ ++ PD TYN + ++ ++ + EM
Sbjct: 471 NTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMK- 529
Query: 143 DSGGSDDWVKYVNLVNIY 160
G D + Y L++ Y
Sbjct: 530 RRGIKPDHISYNTLISGY 547
Score = 43.9 bits (102), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 89/214 (41%), Gaps = 14/214 (6%)
Query: 68 ERVKQSNL----SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 123
E VKQ + ++N L++ L+M ++E +++ EI+ K +V D TYN+ I+
Sbjct: 352 EMVKQGMVPTFYTYNTLIHG----LFME-NKIEAAEILIREIREKGIVLDSVTYNILING 406
Query: 124 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQ 183
+ + DEM D G Y +L IY+ E+ L E
Sbjct: 407 YCQHGDAKKAFALHDEMMTD-GIQPTQFTYTSL--IYVLCRKNKTREADELFEKVVGKGM 463
Query: 184 RQ-WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 242
+ + + L+ + +GN D+ + K + M Y C++ G +E E
Sbjct: 464 KPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARE 523
Query: 243 IIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
++ + K+ IS N L+ +S G T+ A
Sbjct: 524 LMGEMKRRGIKPDHISY-NTLISGYSKKGDTKHA 556
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 67/159 (42%), Gaps = 5/159 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L+ ++ E A + +K + YN +++ + G+ +V + E+
Sbjct: 262 TYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEV---LREM 318
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K +VPD +YN+ I C+ +++ + DEM G + Y L++ +
Sbjct: 319 KEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEM-VKQGMVPTFYTYNTLIHGLFMENK 377
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDK 204
+ AE EK I +TY+ LI Y G+ K
Sbjct: 378 IEAAEILIREIREKGIVL-DSVTYNILINGYCQHGDAKK 415
>gi|357439849|ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479250|gb|AES60453.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 772
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 99/231 (42%), Gaps = 17/231 (7%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQS 73
++ R+ M + F + + +P + TY AL+ A E AE L ++
Sbjct: 331 WSRRLGNMKRAFALFDEMSQRDIVP----NAHTYGALIGGVCKAGQMEAAEILLLEMQSK 386
Query: 74 NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQV 133
+ N +++N M Y G++++ + +++K + D+FTYN+ + D+
Sbjct: 387 GVDLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEA 446
Query: 134 KKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLI 193
K L+ M + G + V + + IY +L AE + EK ITY+ LI
Sbjct: 447 KCILNSM-VEKGVKPNVVTFTMFIEIYCKEGNLAEAE-RLFRDMEKKGEVPNIITYNTLI 504
Query: 194 ILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEII 244
Y K+K+ Q K K +M ++ + L +Y L H GE I
Sbjct: 505 DAYC---KKEKVKQAHK----IKSEMINKGLLPDLYTYSSLIH----GECI 544
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 51/96 (53%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY LL+ Y G K + +E+ + +++ + F+ Y+ ++ Y S G +E+ + EE+
Sbjct: 254 TYNTLLNAYVGRKDRKGVDEILKLMEKEQVVFSVATYSILIQWYSSSGDIEEAEKIFEEM 313
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 141
+ KN+ D++ Y+ IS N+ + DEMS
Sbjct: 314 REKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMS 349
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 56/103 (54%), Gaps = 2/103 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY+ L+ Y+ + E+AE++FE +++ N+ + +Y+ M++ +G +++ + +E+
Sbjct: 289 TYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEM 348
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSD 148
++++VP+ TY I ++ + L EM S G D
Sbjct: 349 SQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQ--SKGVD 389
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 46/95 (48%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+T + +Y +AE LF +++ N + YN ++ Y +V++ + E+
Sbjct: 464 TFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEM 523
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
K ++PD++TY+ I +D+ K +EM
Sbjct: 524 INKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEM 558
>gi|449438586|ref|XP_004137069.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Cucumis sativus]
Length = 505
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 77/167 (46%), Gaps = 2/167 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L+ KAE L ER+K+++++ +N +M + GQ++K +E++
Sbjct: 249 TYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKL 308
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K + P + TYN+ IS + N V + + EM D G S V Y L+N ++ +
Sbjct: 309 KLIGLCPTLVTYNILISGFSKVGNSSVVSELVREME-DRGISPSKVTYTILMNTFVRSDD 367
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 212
+ A + + Q TY LI GN + +++KS+
Sbjct: 368 IEKAYEMFHLMKRIGLVPDQH-TYGVLIHGLCIKGNMVEASKLYKSM 413
Score = 43.5 bits (101), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 78/175 (44%), Gaps = 11/175 (6%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY +L+ Y A ++F+ + + ++ NA+ YN ++ GQV K ++E +
Sbjct: 214 TYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERM 273
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
KR ++ P T+N+ + T +D+ +L+++ G V Y NI I+
Sbjct: 274 KRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKL-IGLCPTLVTY----NILISGFS 328
Query: 166 LVNAES--STLV-EAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 217
V S S LV E E +TY L+ + D I++ ++ + K+
Sbjct: 329 KVGNSSVVSELVREMEDRGISPSKVTYTILMNTFV---RSDDIEKAYEMFHLMKR 380
Score = 40.4 bits (93), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 39/228 (17%), Positives = 88/228 (38%), Gaps = 48/228 (21%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
YT +++ + + + EL++++K + N YN ++T Y G++ V +EI
Sbjct: 180 YTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEIS 239
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS------------------CDSGGSD 148
++ V + TYN+ I + + + L+ M C++G D
Sbjct: 240 KRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLD 299
Query: 149 DWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQI 208
+ Y+ + + LV TY+ LI ++ +GN + ++
Sbjct: 300 KALSYLEKLKLIGLCPTLV--------------------TYNILISGFSKVGNSSVVSEL 339
Query: 209 WKSLRMTKQKMTSRNYICILSSYL----------MLGHLKEVGEIIDQ 246
+ + + Y ++++++ M +K +G + DQ
Sbjct: 340 VREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQ 387
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 100/239 (41%), Gaps = 8/239 (3%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
YT L+ ++A+ +F R+ L+ N +Y M+ + G + + +++K
Sbjct: 145 YTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMK 204
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
V+P+++TYN I+ + K DE+S G + + V Y L+ +
Sbjct: 205 LVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEIS-KRGVACNAVTYNILIGGLCRKGQV 263
Query: 167 VNAES--STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
AE + A + T R T++ L+ G DK + L++ T Y
Sbjct: 264 SKAEGLLERMKRAHINPTTR---TFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTY 320
Query: 225 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE-FHML 282
++S + +G+ V E++ + + S ++ L+ F EKA E FH++
Sbjct: 321 NILISGFSKVGNSSVVSELVREMEDRGISPSKVTY-TILMNTFVRSDDIEKAYEMFHLM 378
>gi|449437410|ref|XP_004136485.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Cucumis sativus]
gi|449519964|ref|XP_004167004.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Cucumis sativus]
Length = 534
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 86/194 (44%), Gaps = 8/194 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY+ ++ + +A ++F + + + N++ +N ++ +++ G+ EKV V ++
Sbjct: 289 TYSIVIDALCRSGQITRAHDVFAEMLDAGCNPNSVTFNNLIRVHLRAGRTEKVLQVYNQM 348
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS---CDSGGSDDWVKYVNLVNIYIT 162
KR D+ TYN I + N+ + K L+ M+ C S N + I
Sbjct: 349 KRLRCAADLITYNFLIETHCKDDNLGEAIKVLNSMAKNDCTPNASS-----FNPIFRCIA 403
Query: 163 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 222
S VN ++ + +TY+ L+ ++A + D I ++ K + + +
Sbjct: 404 KSQDVNGAHRMFARMKEVGCKPNTVTYNILMRMFAVPKSADMIFKLKKEMDEEEVEPNFN 463
Query: 223 NYICILSSYLMLGH 236
Y +++ Y +GH
Sbjct: 464 TYRELIALYCGMGH 477
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 92/212 (43%), Gaps = 25/212 (11%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
++ ++ + + +A+ F+ +K + ++Y ++ + G + + V E+
Sbjct: 220 AFSNVISILCKKRRAVEAQSFFDNLKHK-FEPDVIVYTSLVHGWCRAGDISEAESVFREM 278
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K + P+++TY++ I + + I + EM D+G + + V + NL+ + H
Sbjct: 279 KMAGISPNVYTYSIVIDALCRSGQITRAHDVFAEM-LDAGCNPNSVTFNNLIRV-----H 332
Query: 166 LVNAESSTLVEAEKSITQRQ----WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT- 220
L + +++ + + + ITY+FLI + N + ++ S M K T
Sbjct: 333 LRAGRTEKVLQVYNQMKRLRCAADLITYNFLIETHCKDDNLGEAIKVLNS--MAKNDCTP 390
Query: 221 ---SRNYI--CILSS------YLMLGHLKEVG 241
S N I CI S + M +KEVG
Sbjct: 391 NASSFNPIFRCIAKSQDVNGAHRMFARMKEVG 422
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 40/218 (18%), Positives = 93/218 (42%), Gaps = 27/218 (12%)
Query: 42 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 101
S T+ L+ ++ A TEK +++ ++K+ + + + YN ++ + + + V
Sbjct: 320 PNSVTFNNLIRVHLRAGRTEKVLQVYNQMKRLRCAADLITYNFLIETHCKDDNLGEAIKV 379
Query: 102 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 161
+ + + + P+ ++N A + +++ + M + G + V Y L+ ++
Sbjct: 380 LNSMAKNDCTPNASSFNPIFRCIAKSQDVNGAHRMFARMK-EVGCKPNTVTYNILMRMFA 438
Query: 162 TASHLVNAESSTLV-----EAEKSITQRQWITYDFLIILYAGLGN--------KDKIDQI 208
+S+ ++ E ++ + + TY LI LY G+G+ ++ ID+
Sbjct: 439 V------PKSADMIFKLKKEMDEEEVEPNFNTYRELIALYCGMGHWNHAYMFFREMIDEK 492
Query: 209 WKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 246
M KM +L G LK+ E++D+
Sbjct: 493 CIKPSMPLYKM-------VLEELRKAGQLKKHEELVDK 523
>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
Length = 768
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 96/221 (43%), Gaps = 8/221 (3%)
Query: 58 KWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTY 117
KW EKAE+LF V + NA +N +M G+V + +++ + R +V PD+ +Y
Sbjct: 427 KW-EKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISY 485
Query: 118 NLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA 177
N + T ID+ K LD M G D Y L++ Y A + +A S
Sbjct: 486 NTLVDGHCLTGRIDEAAKLLDVM-VSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREML 544
Query: 178 EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHL 237
K +T +TY+ ++ +G + +++ ++ ++K Y IL+ L
Sbjct: 545 MKGLTP-GVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNG---LCRN 600
Query: 238 KEVGEIIDQWKQSATSD--FDISACNRLLGAFSDVGLTEKA 276
V E ++ + D DI N ++GA G E A
Sbjct: 601 NFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDA 641
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 109/267 (40%), Gaps = 34/267 (12%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLY-AGAKWTEKAEELFERV 70
Y T ID + K + + F+ + + TYT L+H Y + KW E ++ + +
Sbjct: 205 YTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVV-QMLQEM 263
Query: 71 KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 130
L + ++Y ++ G+ + + + + RK + P + Y + + A +
Sbjct: 264 STHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGAL 323
Query: 131 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI--TQRQWIT 188
++ FLD M +G S D + + N Y A+ + + EA ++QW++
Sbjct: 324 SEMHSFLDLM-VRNGVSPDHHIFNIMFNAY--------AKKAMIDEAMHIFDKMRQQWLS 374
Query: 189 -----YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHL------ 237
Y LI LG D D + K +M + +T ++ S L+ G
Sbjct: 375 PGVVNYGALIDALCKLGRVD--DAVLKFNQMINEGVTPDIFV---FSSLVYGLCTVDKWE 429
Query: 238 ---KEVGEIIDQWKQSATSDFDISACN 261
K E++DQ + + F+I CN
Sbjct: 430 KAEKLFFEVLDQGIRLNAAFFNILMCN 456
>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
Length = 825
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 105/253 (41%), Gaps = 10/253 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+Y ALLH YA A + LF + + + ++N ++ Y +G ++K L+ E++
Sbjct: 366 SYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDM 425
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
++ V PDI T++ IS+ +D + + M D+G D Y L+
Sbjct: 426 TKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHM-IDTGVPPDTAVYSCLIQGQCNRRD 484
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG----NKDKIDQIWKSLRMTKQKMTS 221
LV A+ K I + +I G KD +D I T Q+
Sbjct: 485 LVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIH----TGQRPNL 540
Query: 222 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 281
+ ++ Y ++G++KE ++D +S + DI N L+ + G + A
Sbjct: 541 ITFNSLVDGYCLVGNMKEAVGLLDSM-ESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFR 599
Query: 282 LLLQKNCAPTNAS 294
+L K T+ S
Sbjct: 600 DMLHKRVTLTSVS 612
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 103/227 (45%), Gaps = 15/227 (6%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY++L++ K +KAE + ++ + + N + YN ++ Y + G ++ V +E+
Sbjct: 261 TYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEM 320
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+VPD+ N ++++ I + + D M G D + Y L++ Y TA
Sbjct: 321 SSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVL-KGPKPDVISYGALLHGYATAGC 379
Query: 166 LVNAES-STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR-- 222
+ ++ ++ E + R ++ LI YA LG DK +++ MTKQ +
Sbjct: 380 IAGMDNLFNVMVCEGVVPDRH--VFNTLINAYARLGMMDKSLLMFED--MTKQGVNPDII 435
Query: 223 NYICILSSYLMLGHLKEVGE----IIDQWKQSATSDFDI---SACNR 262
+ ++S++ LG L + E +ID T+ + CNR
Sbjct: 436 TFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNR 482
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 66/127 (51%), Gaps = 1/127 (0%)
Query: 38 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 97
P +A T TY L++ Y A+ + +F R+ ++ L + YN ++ + G+V+K
Sbjct: 183 PEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDK 242
Query: 98 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 157
+ +++ + ++P++ TY+ I+ T +D+ ++ L +M +G + + Y L+
Sbjct: 243 AHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQM-VGAGVRPNNMTYNCLI 301
Query: 158 NIYITAS 164
+ Y T+
Sbjct: 302 HGYSTSG 308
>gi|449484944|ref|XP_004157025.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g16010-like [Cucumis sativus]
Length = 637
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY+AL+ + + + A LF+ +K++ L +Y ++ +Y + +VE +VEE+
Sbjct: 232 TYSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEM 291
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K K P +FTY I +D M D G D V NL+NI A
Sbjct: 292 KGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKD-GCKPDVVLINNLINILGRAGR 350
Query: 166 LVNA 169
L +A
Sbjct: 351 LEDA 354
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 73/173 (42%), Gaps = 7/173 (4%)
Query: 38 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 97
P S +E ++ +L + AK KA +F ++K + A +YN ++ + M G EK
Sbjct: 154 PCSVGPAE-WSEILKILGKAKMVNKALSVFYQIKGRKCNPTATVYNTLILMLMHEGHHEK 212
Query: 98 VALVVEEI-KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 156
+ + EI N PD TY+ IS+ D + DEM ++G Y +
Sbjct: 213 IHELYNEICSEGNCSPDTITYSALISAFGKLERYDFAFRLFDEMK-ENGLHPTEKIYTTI 271
Query: 157 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIW 209
+ +Y + V A + E + TY LI GLG ++D +
Sbjct: 272 LAMYFKLNK-VEAALRLVEEMKGKGCAPTVFTYTELI---KGLGKVGRVDDAY 320
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 58/123 (47%), Gaps = 5/123 (4%)
Query: 35 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 94
+G P Y +L+ AK E A ELF+ +K++ +A +Y M+ + + G+
Sbjct: 435 KGFP---PCPAAYCSLIDSLGRAKRYEAANELFQELKENCGRSSARVYAVMIKHFGNCGR 491
Query: 95 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 154
+ + E ++ PD++TYN +S ID+ + M ++G + D +K
Sbjct: 492 LSDAVDLFCEXEKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMR-ENGCTPD-IKSH 549
Query: 155 NLV 157
N++
Sbjct: 550 NII 552
Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 84/210 (40%), Gaps = 3/210 (1%)
Query: 67 FERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAA 126
FE++K + ++ ++ Y ++ + +VEK L++EE+ K P Y I S
Sbjct: 394 FEKMKANGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGR 453
Query: 127 TLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQW 186
+ + E+ + G S V Y ++ + L +A E EK
Sbjct: 454 AKRYEAANELFQELKENCGRSSARV-YAVMIKHFGNCGRLSDA-VDLFCEXEKLGCSPDV 511
Query: 187 ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 246
TY+ L+ G D+ + +++R +++ IL+ G K E+ +
Sbjct: 512 YTYNALMSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTK 571
Query: 247 WKQSATSDFDISACNRLLGAFSDVGLTEKA 276
K+S D + N +L S G+ E A
Sbjct: 572 MKESEIMP-DAVSYNTILSCLSRAGMFEMA 600
>gi|449530582|ref|XP_004172273.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Cucumis sativus]
Length = 505
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 77/167 (46%), Gaps = 2/167 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L+ KAE L ER+K+++++ +N +M + GQ++K +E++
Sbjct: 249 TYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKL 308
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K + P + TYN+ IS + N V + + EM D G S V Y L+N ++ +
Sbjct: 309 KLIGLCPTLVTYNILISGFSKVGNSSVVSELVREME-DRGISPSKVTYTILMNTFVRSDD 367
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 212
+ A + + Q TY LI GN + +++KS+
Sbjct: 368 IEKAYEMFHLMKRIGLVPDQH-TYGVLIHGLCIKGNMVEASKLYKSM 413
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 49/95 (51%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY +L+ Y A ++F+ + + ++ NA+ YN ++ GQV K ++E +
Sbjct: 214 TYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERM 273
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
KR ++ P T+N+ + T +D+ +L+++
Sbjct: 274 KRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKL 308
Score = 40.4 bits (93), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 39/228 (17%), Positives = 88/228 (38%), Gaps = 48/228 (21%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
YT +++ + + + EL++++K + N YN ++T Y G++ V +EI
Sbjct: 180 YTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEIS 239
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS------------------CDSGGSD 148
++ V + TYN+ I + + + L+ M C++G D
Sbjct: 240 KRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLD 299
Query: 149 DWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQI 208
+ Y+ + + LV TY+ LI ++ +GN + ++
Sbjct: 300 KALSYLEKLKLIGLCPTLV--------------------TYNILISGFSKVGNSSVVSEL 339
Query: 209 WKSLRMTKQKMTSRNYICILSSYL----------MLGHLKEVGEIIDQ 246
+ + + Y ++++++ M +K +G + DQ
Sbjct: 340 VREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQ 387
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 100/239 (41%), Gaps = 8/239 (3%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
YT L+ ++A+ +F R+ L+ N +Y M+ + G + + +++K
Sbjct: 145 YTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMK 204
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
V+P+++TYN I+ + K DE+S G + + V Y L+ +
Sbjct: 205 LVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEIS-KRGVACNAVTYNILIGGLCRKGQV 263
Query: 167 VNAES--STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
AE + A + T R T++ L+ G DK + L++ T Y
Sbjct: 264 SKAEGLLERMKRAHINPTTR---TFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTY 320
Query: 225 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE-FHML 282
++S + +G+ V E++ + + S ++ L+ F EKA E FH++
Sbjct: 321 NILISGFSKVGNSSVVSELVREMEDRGISPSKVTY-TILMNTFVRSDDIEKAYEMFHLM 378
>gi|224086334|ref|XP_002307852.1| predicted protein [Populus trichocarpa]
gi|222853828|gb|EEE91375.1| predicted protein [Populus trichocarpa]
Length = 670
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 67/144 (46%), Gaps = 6/144 (4%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQS 73
Y + D IH+ + F+G +S E Y +L Y E + +R+K S
Sbjct: 509 YGRKRDFKNMASTIHTMQ--FDGFSVSL---EAYNCVLDAYGKEGQMESFRSVLQRMKNS 563
Query: 74 NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQV 133
+ + + YN MM +Y +G +++VA V+ E++ + PD+ +YN I + ++
Sbjct: 564 SCTADHYTYNIMMNIYGELGWIDEVAGVLTELRECGLGPDLCSYNTLIKAYGIAGMVEDA 623
Query: 134 KKFLDEMSCDSGGSDDWVKYVNLV 157
+ EM +G D + Y NL+
Sbjct: 624 VGLVKEMR-QNGVEPDKITYTNLI 646
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/260 (18%), Positives = 118/260 (45%), Gaps = 7/260 (2%)
Query: 15 ATRIDLMTKVFGIHSGERYFEGLPLSAKTSET--YTALLHLYAGAKWTEKAEELFERV-K 71
T ID+ T + + GE+ + L S + ++ ++ +Y A + A + E + K
Sbjct: 328 CTMIDIYTTMGQFNEGEKLYMKLKSSGIGLDVIAFSIVIRMYVKAGSLKDACSVLETMEK 387
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
+ ++ + ++ +M+ +Y G ++K+ + +I + VV D YN I+ CA L +
Sbjct: 388 EKDMVPDIYLFRDMLRVYQQCGMMDKLNDLYFKILKSGVVWDQELYNCLINCCARALPVG 447
Query: 132 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 191
++ + +EM G + + + ++++Y A A ++ ++ + I+Y+
Sbjct: 448 ELSRLFNEM-LQRGFDPNTITFNVMLDVYAKAKLFNKARELFMMARKRGLVDV--ISYNT 504
Query: 192 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 251
+I Y + + +++ ++ Y C+L +Y G ++ ++ + K S+
Sbjct: 505 IIAAYGRKRDFKNMASTIHTMQFDGFSVSLEAYNCVLDAYGKEGQMESFRSVLQRMKNSS 564
Query: 252 TSDFDISACNRLLGAFSDVG 271
+ D N ++ + ++G
Sbjct: 565 CTA-DHYTYNIMMNIYGELG 583
Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 72/182 (39%), Gaps = 36/182 (19%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNL----SFNALM-------------------- 81
T+ +L +YA AK KA ELF ++ L S+N ++
Sbjct: 467 TFNVMLDVYAKAKLFNKARELFMMARKRGLVDVISYNTIIAAYGRKRDFKNMASTIHTMQ 526
Query: 82 ----------YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
YN ++ Y GQ+E V++ +K + D +TYN+ ++ ID
Sbjct: 527 FDGFSVSLEAYNCVLDAYGKEGQMESFRSVLQRMKNSSCTADHYTYNIMMNIYGELGWID 586
Query: 132 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 191
+V L E+ + G D Y L+ Y A +V + E ++ + ITY
Sbjct: 587 EVAGVLTELR-ECGLGPDLCSYNTLIKAYGIAG-MVEDAVGLVKEMRQNGVEPDKITYTN 644
Query: 192 LI 193
LI
Sbjct: 645 LI 646
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 39/78 (50%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY ++++Y W ++ + +++ L + YN ++ Y G VE +V+E+
Sbjct: 571 TYNIMMNIYGELGWIDEVAGVLTELRECGLGPDLCSYNTLIKAYGIAGMVEDAVGLVKEM 630
Query: 106 KRKNVVPDIFTYNLWISS 123
++ V PD TY I++
Sbjct: 631 RQNGVEPDKITYTNLITT 648
>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 124/296 (41%), Gaps = 18/296 (6%)
Query: 2 VTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYA-GAK 58
+ K V+S Y+ ID + K FE + + T +YT+L+H + G K
Sbjct: 236 INFKPVVIS---YSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGK 292
Query: 59 WTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYN 118
W E+A+ LF + + N + +N ++ + G+V + ++E + ++ +VP++ TYN
Sbjct: 293 W-EEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYN 351
Query: 119 LWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAE 178
I +++ ++ M G D + Y L+N Y S + E+ L
Sbjct: 352 SLIEGFCLVGDLNSARELFVSMP-SKGCEPDVICYTVLINGYCKTSKV--EEAMKLYNGM 408
Query: 179 KSITQRQWI-TYDFLII-LYAG--LGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLML 234
+ +R + TY L+ L+ G +G+ K+ + K + Y L+
Sbjct: 409 LQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYI---YGIFLNGLCKN 465
Query: 235 GHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
G L E E+ ++ K S DI N L+ G E A E L Q+ P
Sbjct: 466 GCLFEAMELFNKLK-SYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQP 520
Score = 43.9 bits (102), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
E + L+ A E A ELFE++ Q L + + YN M+ + GQV K ++ ++
Sbjct: 488 ECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQK 547
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
+++ PD TY I + +++V + L M
Sbjct: 548 MEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMM 583
Score = 37.7 bits (86), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 22/105 (20%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Query: 62 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 121
+A ELF ++K N+ + +N ++ G++E + E++ ++ + PD+ TYN+ I
Sbjct: 470 EAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMI 529
Query: 122 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
+ + +M +G + D + Y L+ + + L
Sbjct: 530 HEFCRGGQVVKANILFQKME-KNGCTPDKITYATLIRGFFESKKL 573
>gi|357476703|ref|XP_003608637.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509692|gb|AES90834.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 715
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 70/131 (53%), Gaps = 3/131 (2%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLS--AKTSETYTALLHLYAGAKWTEKAEELFERVK 71
Y T ++ M K FE + S A +T TA++ +Y A+W++ A EL++R+K
Sbjct: 333 YNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTAVIKIYGKARWSKDALELWKRMK 392
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKR-KNVVPDIFTYNLWISSCAATLNI 130
++ + ++YN ++ + VG +E+ + ++K+ ++ PD ++Y ++ + +
Sbjct: 393 ENGWPMDFILYNTLLNMCADVGLIEEAETLFRDMKQSEHCKPDSWSYTAMLNIYGSEGAV 452
Query: 131 DQVKKFLDEMS 141
D+ K +EMS
Sbjct: 453 DKAMKLFEEMS 463
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 90/191 (47%), Gaps = 11/191 (5%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T++A+L +YA E+ LFER + + + + ++ + ++ G + + V++E+
Sbjct: 262 TFSAILDVYARLGKVEEVVNLFERGRATGWKPDPITFSVLGKMFGEAGDYDGIRYVLQEM 321
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K V P++ YN + + + +EM DSG + + ++ IY A
Sbjct: 322 KSLGVQPNLVVYNTLLEAMGKAGKPGFARSLFEEM-IDSGIAPNEKTLTAVIKIYGKARW 380
Query: 166 LVNAESSTLVEAEKSITQRQW----ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ-KMT 220
+A +E K + + W I Y+ L+ + A +G ++ + +++ ++ ++ K
Sbjct: 381 SKDA-----LELWKRMKENGWPMDFILYNTLLNMCADVGLIEEAETLFRDMKQSEHCKPD 435
Query: 221 SRNYICILSSY 231
S +Y +L+ Y
Sbjct: 436 SWSYTAMLNIY 446
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 11/149 (7%)
Query: 11 DSDYATRIDLMTKVFGIHSGERYF-EGLPLSAKTSET--------YTALLHLYAGAKWTE 61
DS A +T V I+ R+ + L L + E Y LL++ A E
Sbjct: 358 DSGIAPNEKTLTAVIKIYGKARWSKDALELWKRMKENGWPMDFILYNTLLNMCADVGLIE 417
Query: 62 KAEELFERVKQS-NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
+AE LF +KQS + ++ Y M+ +Y S G V+K + EE+ + + ++
Sbjct: 418 EAETLFRDMKQSEHCKPDSWSYTAMLNIYGSEGAVDKAMKLFEEMSKFGIELNVMGCTCL 477
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDD 149
I + ID + K D +S + G D
Sbjct: 478 IQCLGKAMEIDDLVKVFD-ISVERGVKPD 505
Score = 37.7 bits (86), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 99/239 (41%), Gaps = 18/239 (7%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY+ ++ +KA FER+ ++ L + + ++ ++ +Y +G+VE+V + E
Sbjct: 227 TYSTIISCAKKCNLFDKAVYWFERMYKTGLMPDEVTFSAILDVYARLGKVEEVVNLFERG 286
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ PD T+++ + D ++ L EM G + V Y L+ A
Sbjct: 287 RATGWKPDPITFSVLGKMFGEAGDYDGIRYVLQEMK-SLGVQPNLVVYNTLLEAMGKAGK 345
Query: 166 LVNAES-------STLVEAEKSITQRQWITYDFLIILYA-GLGNKDKIDQIWKSLRMTKQ 217
A S S + EK++T +I +Y +KD + ++WK ++
Sbjct: 346 PGFARSLFEEMIDSGIAPNEKTLTA--------VIKIYGKARWSKDAL-ELWKRMKENGW 396
Query: 218 KMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
M Y +L+ +G ++E + KQS D + +L + G +KA
Sbjct: 397 PMDFILYNTLLNMCADVGLIEEAETLFRDMKQSEHCKPDSWSYTAMLNIYGSEGAVDKA 455
>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
Length = 1037
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/258 (19%), Positives = 112/258 (43%), Gaps = 10/258 (3%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
A + + +L +Y T+ A +F+ + + + N ++ + G+
Sbjct: 153 AFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHY 212
Query: 101 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
V +++ R +VPD+F ++ +++ +D+ F+ +M + G + V Y +L+N Y
Sbjct: 213 VYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKME-NLGVEPNIVTYHSLINGY 271
Query: 161 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 220
++ + A+ +EK ++ R +TY LI G + K+D+ K LR +++
Sbjct: 272 VSLGDVEAAKGVLKFMSEKGVS-RNVVTYTLLI---KGYCKQCKMDEAEKVLRGMQEEAA 327
Query: 221 ----SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
R Y ++ Y G + + ++D+ + ++ CN L+ + G +A
Sbjct: 328 LVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKT-NLFICNSLINGYCKRGEIHEA 386
Query: 277 NEFHMLLLQKNCAPTNAS 294
++ N P + S
Sbjct: 387 EGVITRMVDWNLKPDSYS 404
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 70/157 (44%), Gaps = 4/157 (2%)
Query: 5 KEFVLSDSD-YATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTE 61
K F+L ++ Y I + K + R+F L L + TY L+H Y+ A +
Sbjct: 707 KTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVD 766
Query: 62 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 121
+A L + + + L N + YN ++ V++ + ++ +K + P++ TYN I
Sbjct: 767 EAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLI 826
Query: 122 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 158
N+D K D+M + G S V Y L+N
Sbjct: 827 DGYCKIGNMDAAFKLKDKM-IEEGISPSVVTYSALIN 862
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 58/112 (51%), Gaps = 1/112 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY AL++ ++ ++A+ LF ++ Q L N + YN ++ Y +G ++ + +++
Sbjct: 786 TYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKM 845
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 157
+ + P + TY+ I+ +I++ K L++M +G ++Y LV
Sbjct: 846 IEEGISPSVVTYSALINGLCKHGDIERSMKLLNQM-IKAGVDSKLIEYCTLV 896
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 93/231 (40%), Gaps = 2/231 (0%)
Query: 60 TEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNL 119
++A ++++ + N + Y+ ++ Y+S+G VE V++ + K V ++ TY L
Sbjct: 242 VDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTL 301
Query: 120 WISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK 179
I +D+ +K L M ++ D Y L++ Y + +A L E +
Sbjct: 302 LIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDA-VRLLDEMLR 360
Query: 180 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 239
+ + LI Y G + + + + K S +Y +L Y GH E
Sbjct: 361 LGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSE 420
Query: 240 VGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
+ D+ Q + N LL VG + A + L+++ AP
Sbjct: 421 AFNLCDKMLQEGIEP-TVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAP 470
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 94/235 (40%), Gaps = 14/235 (5%)
Query: 62 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 121
+AEE+F+++K S + + Y ++ Y V + V ++R+ + P I YN I
Sbjct: 525 EAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLI 584
Query: 122 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI 181
S + + + L EM G + + V Y L++ + L A SS E +
Sbjct: 585 SGLFKSRRLVEXTDLLTEMGI-RGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGL 643
Query: 182 TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI----CILSSYLMLGHL 237
+ I + LY LG D+ + + QKM + C L S + +
Sbjct: 644 SANIIICSTMVSGLYR-LGRIDEAN-------LLMQKMVDHGFFPDHECFLKSDIRYAAI 695
Query: 238 KEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 292
+++ + +D+ ++ +I N + G + A F +L K P N
Sbjct: 696 QKIADSLDESCKTFLLPNNIVY-NIAIAGLCKTGKVDDARRFFSMLSLKGFVPDN 749
>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
Length = 839
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/258 (19%), Positives = 112/258 (43%), Gaps = 10/258 (3%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
A + + +L +Y T+ A +F+ + + + N ++ + G+
Sbjct: 119 AFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHY 178
Query: 101 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
V +++ R +VPD+F ++ +++ +D+ F+ +M + G + V Y +L+N Y
Sbjct: 179 VYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKME-NLGVEPNIVTYHSLINGY 237
Query: 161 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 220
++ + A+ +EK ++ R +TY LI G + K+D+ K LR +++
Sbjct: 238 VSLGDVEAAKGVLKFMSEKGVS-RNVVTYTLLI---KGYCKQCKMDEAEKVLRGMQEEAA 293
Query: 221 ----SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
R Y ++ Y G + + ++D+ + ++ CN L+ + G +A
Sbjct: 294 LVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKT-NLFICNSLINGYCKRGEIHEA 352
Query: 277 NEFHMLLLQKNCAPTNAS 294
++ N P + S
Sbjct: 353 EGVITRMVDWNLKPDSYS 370
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 62/139 (44%), Gaps = 3/139 (2%)
Query: 5 KEFVLSDSD-YATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTE 61
K F+L ++ Y I + K + R+F L L + TY L+H Y+ A +
Sbjct: 673 KTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVD 732
Query: 62 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 121
+A L + + + L N + YN ++ V++ + ++ +K + P++ TYN I
Sbjct: 733 EAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLI 792
Query: 122 SSCAATLNIDQVKKFLDEM 140
N+D K D+M
Sbjct: 793 DGYCKIGNMDAAFKLKDKM 811
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 94/231 (40%), Gaps = 2/231 (0%)
Query: 60 TEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNL 119
++A ++++ + N + Y+ ++ Y+S+G VE V++ + K V ++ TY L
Sbjct: 208 VDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTL 267
Query: 120 WISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK 179
I +D+ +K L M ++ D Y L++ Y + +A L E +
Sbjct: 268 LIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDA-VRLLDEMLR 326
Query: 180 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 239
+ + LI Y G + + + + K S +Y +L Y GH E
Sbjct: 327 LGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSE 386
Query: 240 VGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
+ D+ Q + N LL VG + A + L++++ AP
Sbjct: 387 AFNLCDKMLQEGIEP-TVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAP 436
Score = 44.7 bits (104), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 95/235 (40%), Gaps = 14/235 (5%)
Query: 62 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 121
+AEE+F+++K S + + Y ++ Y V + V ++R+ + P I YN I
Sbjct: 491 EAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLI 550
Query: 122 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI 181
S + + +V L EM G + + V Y L++ + L A SS E +
Sbjct: 551 SGLFKSRRLVEVTDLLTEMGI-RGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGL 609
Query: 182 TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI----CILSSYLMLGHL 237
+ I + LY LG D+ + + QKM + C L S + +
Sbjct: 610 SANIIICSTMVSGLYR-LGRIDEAN-------LLMQKMVDHGFFPDHECFLKSDIRYAAI 661
Query: 238 KEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 292
+++ + +D+ ++ +I N + G + A F +L K P N
Sbjct: 662 QKIADSLDESCKTFLLPNNIVY-NIAIAGLCKTGKVDDARRFFSMLSLKGFVPDN 715
>gi|356512664|ref|XP_003525037.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74750-like [Glycine max]
Length = 873
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 94/205 (45%), Gaps = 14/205 (6%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L+ ++A A + + A +++R++++ LS + Y+ ++ G + + E+
Sbjct: 449 TYCTLIDIHAKAGFIDVAMSMYKRMQEAGLSPDTFTYSVIINCLGKAGNLAAAHWLFCEM 508
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
VP++ TYN+ I+ A N + K +M ++G D V Y ++ +
Sbjct: 509 VEHGCVPNLVTYNIMIALQAKARNYEMALKLYHDMQ-NAGFQPDKVTYSIVMEALGHCGY 567
Query: 166 LVNAESSTLVEAEKSITQRQWIT----YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 221
L AE S VE + Q+ W+ Y L+ L+ GN +K + +++ M +
Sbjct: 568 LEEAE-SVFVE----MQQKNWVPDEPVYGLLVDLWGKAGNVEKASEWYQA--MLNAGLLP 620
Query: 222 RNYIC--ILSSYLMLGHLKEVGEII 244
C +LS++L L L + ++
Sbjct: 621 NVPTCNSLLSAFLRLHRLPDAYNLV 645
Score = 43.9 bits (102), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 50/246 (20%), Positives = 97/246 (39%), Gaps = 3/246 (1%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
TYT ++ + A+ + +L E++ + N + YN ++ Y +++ V E
Sbjct: 378 HTYTTMVGILGRARRFDSISKLLEQMVKDGCQPNVVTYNRLIHCYGCANYLKEALNVFNE 437
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
++ PD TY I A ID M ++G S D Y ++N A
Sbjct: 438 MQEVGCEPDRVTYCTLIDIHAKAGFIDVAMSMYKRMQ-EAGLSPDTFTYSVIINCLGKAG 496
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
+L A E + +TY+ +I L A N + +++ ++ + Y
Sbjct: 497 NLAAAH-WLFCEMVEHGCVPNLVTYNIMIALQAKARNYEMALKLYHDMQNAGFQPDKVTY 555
Query: 225 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 284
++ + G+L+E + + +Q D L+ + G EKA+E++ +L
Sbjct: 556 SIVMEALGHCGYLEEAESVFVEMQQKNWVP-DEPVYGLLVDLWGKAGNVEKASEWYQAML 614
Query: 285 QKNCAP 290
P
Sbjct: 615 NAGLLP 620
>gi|242064536|ref|XP_002453557.1| hypothetical protein SORBIDRAFT_04g008050 [Sorghum bicolor]
gi|241933388|gb|EES06533.1| hypothetical protein SORBIDRAFT_04g008050 [Sorghum bicolor]
Length = 390
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 77/166 (46%), Gaps = 13/166 (7%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
+ + ++L A+ T +A +L + + ++ + MYN + + + QV ++ + ++
Sbjct: 148 DAFVSMLEALCNAEKTAEAIDLLHMMPEKGITTDVGMYNIIFSALGKLKQVSFMSSLYDK 207
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+K V PD+FTYN+ ISS +D+ + +EM DS D + Y +++N
Sbjct: 208 MKANGVAPDVFTYNIMISSFGRVGLVDKASELFEEMD-DSSCKPDVITYNSMINCL---- 262
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGL----GNKDKID 206
++ L EA Q YD + Y+ L G +K+D
Sbjct: 263 ----GKNGDLDEAHMLFKDMQEKGYDPDVFTYSILIECFGKSNKVD 304
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 47/95 (49%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY ++ + +KA ELFE + S+ + + YN M+ G +++ ++ +++
Sbjct: 219 TYNIMISSFGRVGLVDKASELFEEMDDSSCKPDVITYNSMINCLGKNGDLDEAHMLFKDM 278
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
+ K PD+FTY++ I + +D DEM
Sbjct: 279 QEKGYDPDVFTYSILIECFGKSNKVDMACSLFDEM 313
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 103/256 (40%), Gaps = 28/256 (10%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT L+ + A K E + N + YN ++ V+K ++ ++
Sbjct: 12 TYTILIRMSGKAGKATKFVSFLEEMVSKGCVLNLIAYNTVIEALGKNKMVDKAIFMLSKM 71
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ P+ FTY++ + A + ++ + LD S G + Y LV + H
Sbjct: 72 IESDCQPNQFTYSIMLDVLATGGQLHRLNEILDICS----GHLNRSVYSYLVKALCKSGH 127
Query: 166 LVNAESSTLVEAEKSITQRQWITY-----DFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 220
A S+ R W ++ D + + L N +K + L M +K
Sbjct: 128 ASEAH---------SVFCRMWSSHEKGDRDAFVSMLEALCNAEKTAEAIDLLHMMPEKGI 178
Query: 221 SRN---YICILSSYLMLGHLKEV---GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTE 274
+ + Y I S+ LG LK+V + D+ K + + D+ N ++ +F VGL +
Sbjct: 179 TTDVGMYNIIFSA---LGKLKQVSFMSSLYDKMKANGVAP-DVFTYNIMISSFGRVGLVD 234
Query: 275 KANEFHMLLLQKNCAP 290
KA+E + +C P
Sbjct: 235 KASELFEEMDDSSCKP 250
>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
Length = 1202
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 111/260 (42%), Gaps = 11/260 (4%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSE---TYTALLHLYAGAKWTEKAEELFERV 70
Y ID + KV + E+ F+ + L+ + TY L+ Y EK+ ++ ER+
Sbjct: 590 YNVLIDGLCKVRQMKDAEQLFDEM-LARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERM 648
Query: 71 KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 130
K N+ + + +N ++ G VE V+ E+K + VPD FT+++ ++
Sbjct: 649 KADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKA 708
Query: 131 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 190
D E + DSG + L+N + AE E K + + + Y+
Sbjct: 709 DAALGVY-ETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNE-VLYN 766
Query: 191 FLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN--YICILSSYLMLGHLKEVGEIIDQWK 248
+I Y+ G D + K M KQ M + Y C++ ++ LG ++ + +++ K
Sbjct: 767 TMIDGYSRKG--DLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMK 824
Query: 249 QSATSDFDISACNRLLGAFS 268
S + N L+G +
Sbjct: 825 LKGVSP-SVETYNILIGGYG 843
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 84/189 (44%), Gaps = 2/189 (1%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
+ + ETY L+ Y +K +L + ++ + N + Y ++ ++ + +
Sbjct: 829 SPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQI 888
Query: 101 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
V +++ + V P++ YN+ I C + I+ +F +EM G + V Y L++
Sbjct: 889 VKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMF-KKGIELNLVTYNTLIDGL 947
Query: 161 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 220
L AE L+E + + TY+ LI Y GN + +++ ++ + K T
Sbjct: 948 SMNGKLAEAE-DMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPT 1006
Query: 221 SRNYICILS 229
+ Y ++S
Sbjct: 1007 LKTYHLLIS 1015
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 82/187 (43%), Gaps = 8/187 (4%)
Query: 46 TYTALLH-LYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
TY L+ L K E AE++ + + L + YN +++ Y G V++ + EE
Sbjct: 939 TYNTLIDGLSMNGKLAE-AEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEE 997
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+K + P + TY+L IS C I+ KK EMS D + Y +++ Y
Sbjct: 998 MKTSGIKPTLKTYHLLISLCTKE-GIELTKKIFGEMSLQP----DLLVYNGVLHCYAVHG 1052
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
+ A + EKSI + TY+ LI+ +G ++ + ++ + + + Y
Sbjct: 1053 DMDKAFNLQKQMIEKSIGLDK-TTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTY 1111
Query: 225 ICILSSY 231
I+ +
Sbjct: 1112 DIIVKGH 1118
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 95/225 (42%), Gaps = 9/225 (4%)
Query: 70 VKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLN 129
+++ + + L YN ++ + +G +E V ++K K V P + TYN+ I
Sbjct: 788 MEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYE 847
Query: 130 IDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITY 189
D+ L EM D+G + V Y L+N S L+ A+ ++ ++ I Y
Sbjct: 848 FDKCFDLLKEME-DNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRI-Y 905
Query: 190 DFLIILYAGLGNKDKIDQIWK-SLRMTKQ--KMTSRNYICILSSYLMLGHLKEVGEIIDQ 246
+ LI G +K KI+ ++ S M K+ ++ Y ++ M G L E +++ +
Sbjct: 906 NMLI---DGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLE 962
Query: 247 WKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 291
+ D+ N L+ + G ++ + + PT
Sbjct: 963 ISRKGLKP-DVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPT 1006
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 82/188 (43%), Gaps = 8/188 (4%)
Query: 62 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 121
K ELF R+K +S +YN ++ V Q++ + +E+ + ++P + TYN I
Sbjct: 570 KGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLI 629
Query: 122 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI 181
N ++ K + M D+ + + L+ A + +AE + L E +
Sbjct: 630 DGYCKDGNPEKSFKVRERMKADN-IEPSLITFNTLLKGLFKAGMVEDAE-NVLTEMKDQG 687
Query: 182 TQRQWITYDFLIILYAGLGNKDKIDQ---IWKSLRMTKQKMTSRNYICILSSYLMLGHLK 238
T+ IL+ G + DK D ++++ + KM + +L++ G ++
Sbjct: 688 FVPDAFTFS---ILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIE 744
Query: 239 EVGEIIDQ 246
+ EI+ +
Sbjct: 745 KAEEILGR 752
>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
Length = 1269
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/246 (19%), Positives = 105/246 (42%), Gaps = 7/246 (2%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
+ + L Y + + A+++ +++ N + YN ++ G VE+ ++++
Sbjct: 225 HGSALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDME 284
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
+VPD FTY I+ + ++ K LDEMSC + + V Y NL++ ++
Sbjct: 285 DYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSC-AELKPNVVVYANLIDGFMREG-- 341
Query: 167 VNAESS--TLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
NA+ + + E + Q ITYD L+ +G D+ + K + + + Y
Sbjct: 342 -NADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITY 400
Query: 225 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 284
I+ + K+ ++ + + + S ++ + ++ G EKA++ +
Sbjct: 401 NLIIEGHFRHHSKKDAFRLLSEMENAGISP-NVYTYSIMIHGLCQSGEPEKASDLLEEMT 459
Query: 285 QKNCAP 290
K P
Sbjct: 460 TKGLKP 465
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 61/125 (48%), Gaps = 1/125 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY+ ++H + EKA +L E + L NA +Y +++ Y G V + +++
Sbjct: 434 TYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKM 493
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ NV+PD++ YN I + +++ K+ +M + G + Y L++ Y+
Sbjct: 494 TKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQ-ERGLLPNEFTYSGLIHGYLKNGD 552
Query: 166 LVNAE 170
L +AE
Sbjct: 553 LESAE 557
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 52/131 (39%), Gaps = 35/131 (26%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVA------ 99
TY+ L+H Y E AE+L +R+ + L N ++Y +++ Y +EKV+
Sbjct: 539 TYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSM 598
Query: 100 -----------------------------LVVEEIKRKNVVPDIFTYNLWISSCAATLNI 130
V+ I++ VPD+ Y+ IS T +
Sbjct: 599 LDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADR 658
Query: 131 DQVKKFLDEMS 141
++ LDEMS
Sbjct: 659 EKAFGILDEMS 669
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 99/249 (39%), Gaps = 3/249 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY +L+ E+A E+ ++ + S N + YN +++ QVE+ + +
Sbjct: 353 TYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVL 412
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K ++PD+ T+N I T N + +EM G D Y L++ +
Sbjct: 413 TSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMK-TKGCHPDEFTYNMLIDSLCSRGR 471
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
L A S L E E S R +TY+ LI + ++ ++I+ + + Y
Sbjct: 472 LEEA-LSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYN 530
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 285
++ ++E +++DQ D N LL F G +KA + +
Sbjct: 531 TLIDGLCKNRRVEEAAQLMDQMLMEGLKP-DKFTYNSLLTYFCRAGDIKKAADIVQTMTS 589
Query: 286 KNCAPTNAS 294
C P + +
Sbjct: 590 NGCEPDSVT 598
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 57/112 (50%), Gaps = 1/112 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L+ + K E+AEE+F+ ++ +S N + YN ++ +VE+ A +++++
Sbjct: 493 TYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQM 552
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 157
+ + PD FTYN ++ +I + + M+ +G D V Y L+
Sbjct: 553 LMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMT-SNGCEPDSVTYGTLI 603
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 48/110 (43%), Gaps = 2/110 (1%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLS--AKTSETYTALLHLYAGAKWTEKAEELFERVK 71
Y T ID K I E F+ + L ++ TY L+ + E+A +L +++
Sbjct: 494 YNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQML 553
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 121
L + YN ++T + G ++K A +V+ + PD TY I
Sbjct: 554 MEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLI 603
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 46/250 (18%), Positives = 105/250 (42%), Gaps = 4/250 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQS-NLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
T+ L+ YA + ++A + + +++ L +A YN ++ + + +++ V +V
Sbjct: 142 TFLILIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSR 201
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+ + + PD+ T+N+ I + I ++EM G S D + L+ +I
Sbjct: 202 MVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMG-SYGLSPDEKTFTTLMQGFIEEG 260
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
++ N + + +T + L+ Y G +++ + + +
Sbjct: 261 NM-NGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTF 319
Query: 225 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 284
+++ +GH+K EI+D Q D DI N L+ +G E+A E ++
Sbjct: 320 NSLVNGLCRIGHVKHALEILDVMLQEGF-DPDIFTYNSLIFGLCKLGEVEEAVEILNQMI 378
Query: 285 QKNCAPTNAS 294
++ +P +
Sbjct: 379 LRDFSPNTVT 388
>gi|115436822|ref|NP_001043145.1| Os01g0505500 [Oryza sativa Japonica Group]
gi|56201654|dbj|BAD73118.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113532676|dbj|BAF05059.1| Os01g0505500 [Oryza sativa Japonica Group]
gi|125570544|gb|EAZ12059.1| hypothetical protein OsJ_01942 [Oryza sativa Japonica Group]
Length = 540
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 102/226 (45%), Gaps = 13/226 (5%)
Query: 40 SAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVA 99
S + +T+ ++ YA A+ ++A E FE++ L + YN ++ + QV+K
Sbjct: 184 SCLSKDTFKIIVRRYARARKVKEAVETFEKMSSFGLKTDLSDYNWLIDILSKSKQVKKAH 243
Query: 100 LVVEEIKRKN-VVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 158
+ +E+KRK +PD+ TY + + ++ +K EM D+G D V Y L++
Sbjct: 244 AIFKEMKRKGRFIPDLKTYTVLMEGWGHEKDLLMLKAVYQEM-LDAGIKPDVVAYGMLIS 302
Query: 159 IYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ- 217
+ + A E E+S Y LI GLG+ +++D+ K +++K+
Sbjct: 303 AFCKSGKCDEA-IKVFHEMEESGCMPSPHVYCMLI---NGLGSMERLDEALKYFQLSKES 358
Query: 218 --KMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA----TSDFDI 257
M ++ +Y +++D+ ++S T +DI
Sbjct: 359 GFPMEVPTCNAVIGAYCRALEFHHAFKMVDEMRKSGIGPNTRTYDI 404
>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 634
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 104/247 (42%), Gaps = 20/247 (8%)
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
EKA + + ++ Y++++ + +VEK + +E+KR + PD++TY
Sbjct: 104 EKAYNVIREMMSKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTL 163
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA-ESSTLVEAEK 179
+ I+Q + + DEM D G + + V Y L++ Y+ L A E ++ +
Sbjct: 164 LDRFCKVGLIEQARNWFDEMQQD-GCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNG 222
Query: 180 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN-YICILSSYLMLGHLK 238
+ +TY LI + G +K QI+ ++ K + + Y I+ S L ++
Sbjct: 223 CVP--NIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVV 280
Query: 239 EVGEIID--------QWKQSATSDFDISAC-------NRLLGAFSDVGLTEKANEFHMLL 283
G ++D + + + C + L+ F VG ++A E +
Sbjct: 281 TYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKM 340
Query: 284 LQKNCAP 290
L C+P
Sbjct: 341 LGHGCSP 347
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 58/301 (19%), Positives = 110/301 (36%), Gaps = 32/301 (10%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPL--SAKTSETYTALLHLYAGAKWTEKAEELFERVK 71
Y T +D KV I +F+ + A TYTAL+H Y + +A E+FE +
Sbjct: 160 YTTLLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMML 219
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNV-----------------VPDI 114
+ N + Y ++ + G+ EK + +K V P++
Sbjct: 220 SNGCVPNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNV 279
Query: 115 FTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTL 174
TY + + + + L+ MS + G + + Y L++ + L A+
Sbjct: 280 VTYGALVDGLCKAHKVKEARDLLETMSLE-GCEPNQIIYDALIDGFCKVGKLDEAQEVFT 338
Query: 175 VEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLML 234
+ + TY LI L ++D K L + + N + M+
Sbjct: 339 KMLGHGCSPNVY-TYSSLI---DKLFKDKRLDLALKVLTKMLENSCAPNVVIYTE---MV 391
Query: 235 GHLKEVGEIIDQWK-----QSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCA 289
L +VG+ + ++ + ++ ++ F G ++ E L+ K CA
Sbjct: 392 DGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCA 451
Query: 290 P 290
P
Sbjct: 452 P 452
Score = 44.3 bits (103), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 42/208 (20%), Positives = 92/208 (44%), Gaps = 8/208 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY AL+ A ++A +L E + N ++Y+ ++ + VG++++ V ++
Sbjct: 281 TYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKM 340
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
P+++TY+ I +D K L +M ++ + + V Y +V+
Sbjct: 341 LGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKML-ENSCAPNVVIYTEMVDGLCKVGK 399
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
A L+ EK +TY +I G G ++D+ + L++ K + N+I
Sbjct: 400 TDEAYRLMLMMEEKG-CYPNVVTYTAMI---DGFGKAGRVDRCLELLQLMTSKGCAPNFI 455
Query: 226 ---CILSSYLMLGHLKEVGEIIDQWKQS 250
+++ G L + +++++ KQ+
Sbjct: 456 TYRVLINHCCAAGLLDDAHKLLEEMKQT 483
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 60/148 (40%), Gaps = 6/148 (4%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
YT ++ T++A L +++ N + Y M+ + G+V++ +++ +
Sbjct: 387 YTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMT 446
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA-SH 165
K P+ TY + I+ C A +D K L+EM W K++ + I SH
Sbjct: 447 SKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMK-----QTYWPKHIGMYRKVIEGFSH 501
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLI 193
A L E + + Y LI
Sbjct: 502 EFVASLGLLAELSEDGSVPILPVYKLLI 529
>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 106/238 (44%), Gaps = 10/238 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
YT L+ ++ ++ LF+++++ ++ ++ + G+V+ +++E+
Sbjct: 170 AYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEM 229
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K ++ DI YN+ I S +D KF E+ + G D V Y +++ + A+
Sbjct: 230 KSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEAN-GLKPDEVTYTSMIGVLCKANR 288
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN-- 223
L A EK+ +R TY + ++ G G+ K D+ + L + K + +
Sbjct: 289 LDEA-VEMFEHLEKN--RRVPCTYAYNTMI-MGYGSAGKFDEAYSLLERQRAKGSIPSVI 344
Query: 224 -YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 280
Y CIL+ +G + E ++ ++ K+ A ++S N L+ G + A E
Sbjct: 345 AYNCILTCLRKMGKVDEALKVFEEMKKDAAP--NLSTYNILIDMLCRAGKLDTAFELR 400
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/282 (20%), Positives = 120/282 (42%), Gaps = 12/282 (4%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSA-KTSE-TYTALLHLYAGAKWTEKAEELFERVK 71
Y ID KV + ++F + + K E TYT+++ + A ++A E+FE ++
Sbjct: 241 YNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLE 300
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
++ YN M+ Y S G+ ++ ++E + K +P + YN ++ +D
Sbjct: 301 KNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVD 360
Query: 132 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQ-WITYD 190
+ K +EM D+ + + Y L+++ A L T E S+ + +
Sbjct: 361 EALKVFEEMKKDA--APNLSTYNILIDMLCRAGKL-----DTAFELRDSMQKAGLFPNVR 413
Query: 191 FLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQS 250
+ I+ L K+D+ K+ + + I S LG + V + +++
Sbjct: 414 TVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKM 473
Query: 251 ATSDFDISAC--NRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
SD ++ L+ F + G E ++ + ++ +NC+P
Sbjct: 474 LDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSP 515
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 119/320 (37%), Gaps = 53/320 (16%)
Query: 16 TRIDLMTKVFGIHSGERYFEGLPLS--AKTSETYTALLHLYAGAKWTEKAEELFERVKQS 73
T +D M K G FE + + +Y+ L+H A + + ELF +K+
Sbjct: 522 TYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQ 581
Query: 74 NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQV 133
+ YN ++ + G+V K ++EE+K K P + TY I A +D+
Sbjct: 582 GCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEA 641
Query: 134 KKFLDEMSCD---------SGGSDDWVKYVNLVNIYITASHLV-----------NAESST 173
+E S D + K + Y+ L+ N+
Sbjct: 642 YMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDA 701
Query: 174 LVEAEK--------------SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 219
LV+AE+ T Q +TY LI + +K W+ ++ K
Sbjct: 702 LVKAEEINEALVCFQSMKELKCTPNQ-VTYGILINGLCKVRKFNKAFVFWQEMQKQGMKP 760
Query: 220 TSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC-----------NRLLGAFS 268
++ +Y ++S G++ E G + D++K A SAC NR + AFS
Sbjct: 761 STISYTTMISGLAKAGNIAEAGALFDRFK--ANGGVPDSACYNAMIEGLSNGNRAMDAFS 818
Query: 269 DVGLTEKANEFHMLLLQKNC 288
L E+ + + K C
Sbjct: 819 ---LFEETRRRGLPIHNKTC 835
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 96/243 (39%), Gaps = 10/243 (4%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLS--AKTSETYTALLHLYAGAKWTEKAEELFERVK 71
+ + ID + KV + + +E + S S YT+L+ + E ++++ +
Sbjct: 450 FCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMI 509
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
N S + + N M G+ EK + EEIK + VPD +Y++ I +
Sbjct: 510 NQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFAN 569
Query: 132 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 191
+ + M + G D Y N+V VN L E + + +TY
Sbjct: 570 ETYELFYSMK-EQGCVLDTRAY-NIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGS 627
Query: 192 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN---YICILSSYLMLGHLKEVGEIIDQWK 248
+I GL D++D+ + K K N Y ++ + +G + E I+++
Sbjct: 628 VI---DGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELM 684
Query: 249 QSA 251
Q
Sbjct: 685 QKG 687
>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
Length = 687
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 99/232 (42%), Gaps = 3/232 (1%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y+A++ A+ LF +++ + + YN M+ + S G+ +++E+
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML 317
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
+ + PD+ TYN I++ + ++ DEM G + + Y ++++ + + L
Sbjct: 318 ERKISPDVVTYNALINAFVKEGKFFEAEELYDEM-LPRGIIPNTITYSSMIDGFCKQNRL 376
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 226
AE + A K + IT++ LI Y G D ++ + T + Y
Sbjct: 377 DAAEHMFYLMATKGCSP-NLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435
Query: 227 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 278
++ + ++G L +++ + S DI C+ LL D G + A E
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCP-DIVTCDTLLDGLCDNGKLKDALE 486
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 57/131 (43%), Gaps = 2/131 (1%)
Query: 82 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 141
YN +++ ++ G+ + + EE+ + +VPD TY+ I +D+ + D M
Sbjct: 514 YNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMG 573
Query: 142 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 201
S S + V + L+N Y A V+ E + ITY LI + +GN
Sbjct: 574 SKS-FSPNVVTFTTLINGYCKAGR-VDDGLELFCEMGRRGIVANAITYITLICGFRKVGN 631
Query: 202 KDKIDQIWKSL 212
+ I++ +
Sbjct: 632 INGALDIFQEM 642
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 78/177 (44%), Gaps = 8/177 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY AL++ + +AEEL++ + + N + Y+ M+ + +++ + +
Sbjct: 327 TYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLM 386
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K P++ T+N I ID + L EM+ ++G D Y L++ +
Sbjct: 387 ATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMT-ETGLVADTTTYNTLIHGFYLVGD 445
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKID---QIWKSLRMTKQKM 219
L NA L E S +T D L+ GL + K+ +++K ++ +K+ +
Sbjct: 446 L-NAALDLLQEMISSGLCPDIVTCDTLL---DGLCDNGKLKDALEMFKVMQKSKKDL 498
>gi|125526112|gb|EAY74226.1| hypothetical protein OsI_02107 [Oryza sativa Indica Group]
Length = 540
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 102/226 (45%), Gaps = 13/226 (5%)
Query: 40 SAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVA 99
S + +T+ ++ YA A+ ++A E FE++ L + YN ++ + QV+K
Sbjct: 184 SCLSKDTFKIIVRRYARARKVKEAVETFEKMSSFGLKTDLSDYNWLIDILSKSKQVKKAH 243
Query: 100 LVVEEIKRKN-VVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 158
+ +E+KRK +PD+ TY + + ++ +K EM D+G D V Y L++
Sbjct: 244 AIFKEMKRKGRFIPDLKTYTVLMEGWGHEKDLLMLKAVYQEM-LDAGIKPDVVAYGMLIS 302
Query: 159 IYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ- 217
+ + A E E+S Y LI GLG+ +++D+ K +++K+
Sbjct: 303 AFCKSGKCDEA-IKVFHEMEESGCMPSPHVYCMLI---NGLGSMERLDEALKYFQLSKES 358
Query: 218 --KMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA----TSDFDI 257
M ++ +Y +++D+ ++S T +DI
Sbjct: 359 GFPMEVPTCNAVIGAYCRALEFHHAFKMVDEMRKSGIGPNTRTYDI 404
>gi|255660932|gb|ACU25635.1| pentatricopeptide repeat-containing protein [Rhaphithamnus
venustus]
Length = 484
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 105/259 (40%), Gaps = 16/259 (6%)
Query: 30 GERYF-----EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNE 84
+RYF EG+ T T+ ++ + + E A FE +K ++ + + YN
Sbjct: 134 AKRYFNKMLSEGI---EPTRHTFNIMIWGFFLSGKVETANRFFEDMKNREITPDVITYNT 190
Query: 85 MMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS 144
M+ Y V ++E+ E+K +N+ P + TY I + +D + ++EM
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMK-GY 249
Query: 145 GGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDK 204
G + + Y L+ A + A S +K I + LI GN D
Sbjct: 250 GIKANAITYSTLLPGLCNAEKMSEARSILKEMVDKYIAPTDNSIFMRLISGQCKAGNLDA 309
Query: 205 IDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ-------WKQSATSDFDI 257
+ K++ + +Y ++ +Y G + +++D+ + +T +
Sbjct: 310 AADVLKAMIRLSVPTEAGHYGVLIENYCKAGQYDQAVKLLDKLIEKDIILRPQSTLHMES 369
Query: 258 SACNRLLGAFSDVGLTEKA 276
SA N L+G + G T KA
Sbjct: 370 SAYNPLIGYLCNNGQTAKA 388
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 7/167 (4%)
Query: 42 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 101
+T ++Y AL + + A+ F ++ + +N M+ + G+VE
Sbjct: 113 RTIKSYDALFKVISRRGRYMMAKRYFNKMLSEGIEPTRHTFNIMIWGFFLSGKVETANRF 172
Query: 102 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 161
E++K + + PD+ TYN I+ +++ +K+ EM V Y L+ Y+
Sbjct: 173 FEDMKNREITPDVITYNTMINGYYRVKKMEEAEKYFVEMK-GRNIEPTVVTYTTLIKGYV 231
Query: 162 TASHLVNAESSTLVEAEKSI-TQRQWITYDFLIILYAGLGNKDKIDQ 207
+ + +A LVE K + ITY L+ GL N +K+ +
Sbjct: 232 SVDQVDDA--LRLVEEMKGYGIKANAITYSTLL---PGLCNAEKMSE 273
>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Vitis vinifera]
Length = 939
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/258 (19%), Positives = 112/258 (43%), Gaps = 10/258 (3%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
A + + +L +Y T+ A +F+ + + + N ++ + G+
Sbjct: 153 AFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHY 212
Query: 101 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
V +++ R +VPD+F ++ +++ +D+ F+ +M + G + V Y +L+N Y
Sbjct: 213 VYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKME-NLGVEPNIVTYHSLINGY 271
Query: 161 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 220
++ + A+ +EK ++ R +TY LI G + K+D+ K LR +++
Sbjct: 272 VSLGDVEAAKGVLKFMSEKGVS-RNVVTYTLLI---KGYCKQCKMDEAEKVLRGMQEEAA 327
Query: 221 ----SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
R Y ++ Y G + + ++D+ + ++ CN L+ + G +A
Sbjct: 328 LVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKT-NLFICNSLINGYCKRGEIHEA 386
Query: 277 NEFHMLLLQKNCAPTNAS 294
++ N P + S
Sbjct: 387 EGVITRMVDWNLKPDSYS 404
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 70/157 (44%), Gaps = 4/157 (2%)
Query: 5 KEFVLSDSD-YATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTE 61
K F+L ++ Y I + K + R+F L L + TY L+H Y+ A +
Sbjct: 707 KTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVD 766
Query: 62 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 121
+A L + + + L N + YN ++ V++ + ++ +K + P++ TYN I
Sbjct: 767 EAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLI 826
Query: 122 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 158
N+D K D+M + G S V Y L+N
Sbjct: 827 DGYCKIGNMDAAFKLKDKM-IEEGISPSVVTYSALIN 862
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 62/121 (51%), Gaps = 1/121 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY AL++ ++ ++A+ LF ++ Q L N + YN ++ Y +G ++ + +++
Sbjct: 786 TYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKM 845
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ + P + TY+ I+ +I++ K L++M +G ++Y LV YI +
Sbjct: 846 IEEGISPSVVTYSALINGLCKHGDIERSMKLLNQM-IKAGVDSKLIEYCTLVQGYIRSGE 904
Query: 166 L 166
+
Sbjct: 905 M 905
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 94/231 (40%), Gaps = 2/231 (0%)
Query: 60 TEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNL 119
++A ++++ + N + Y+ ++ Y+S+G VE V++ + K V ++ TY L
Sbjct: 242 VDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTL 301
Query: 120 WISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK 179
I +D+ +K L M ++ D Y L++ Y + +A L E +
Sbjct: 302 LIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDA-VRLLDEMLR 360
Query: 180 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 239
+ + LI Y G + + + + K S +Y +L Y GH E
Sbjct: 361 LGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSE 420
Query: 240 VGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
+ D+ Q + N LL VG + A + L++++ AP
Sbjct: 421 AFNLCDKMLQEGIEP-TVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAP 470
Score = 44.7 bits (104), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 95/235 (40%), Gaps = 14/235 (5%)
Query: 62 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 121
+AEE+F+++K S + + Y ++ Y V + V ++R+ + P I YN I
Sbjct: 525 EAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLI 584
Query: 122 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI 181
S + + +V L EM G + + V Y L++ + L A SS E +
Sbjct: 585 SGLFKSRRLVEVTDLLTEMGI-RGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGL 643
Query: 182 TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI----CILSSYLMLGHL 237
+ I + LY LG D+ + + QKM + C L S + +
Sbjct: 644 SANIIICSTMVSGLYR-LGRIDEANLLM-------QKMVDHGFFPDHECFLKSDIRYAAI 695
Query: 238 KEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 292
+++ + +D+ ++ +I N + G + A F +L K P N
Sbjct: 696 QKIADSLDESCKTFLLPNNI-VYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDN 749
>gi|356574710|ref|XP_003555488.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g23020-like [Glycine max]
Length = 821
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 111/254 (43%), Gaps = 39/254 (15%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+YT+L+H+ A A A+ ++++++ L + + Y +++ + +GQ+E + E+
Sbjct: 526 SYTSLIHILASADQPHIAKPYLKKMQEAGLVSDCIPYCAVISSFAKLGQLEMTEDIYREM 585
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
R V PD+ + + I+ + + + ++DEM +G + V Y +L+ +Y +
Sbjct: 586 IRHGVQPDVIVHGILINVFSDAGRVKEAIGYVDEMK-KAGLPGNTVIYNSLIKLYAKIDN 644
Query: 166 LVNAESS--------------------------TLVEAEKSITQ-------RQWITYDFL 192
L A+ + ++V+ K I + T+ +
Sbjct: 645 LEKAKEAYKLLQLSDEGPGVYSSNCMIDLYVKRSMVDQAKEIFETLKKNGAANEFTFAMM 704
Query: 193 IILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSAT 252
+ LY + D+ QI K +R +T +Y +L Y + G KE I+ +K+
Sbjct: 705 LCLYKKIERFDEAIQIAKQIRKLG-PLTDLSYNNVLDLYAIAGRPKEA---IETFKEMVR 760
Query: 253 SDFDISACN-RLLG 265
+ ++ C+ R LG
Sbjct: 761 ASIQVNDCSLRSLG 774
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 62/132 (46%), Gaps = 15/132 (11%)
Query: 18 IDLMTKVFGIHSGERYFE----GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQS 73
+ L K GE +F G PL +K S+ + ++ A + EL ERV +
Sbjct: 224 VQLYKKAGEFQKGEEFFRKWSSGKPLRSK-SKPLRSNDNVVA-------SPELDERVACA 275
Query: 74 NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQV 133
N SF + YN ++ Y GQ+++ + E+ ++ V P T+N I+ C +++V
Sbjct: 276 NASFGSHTYNTLIDTYGKAGQLKEASQTFVEMLKQGVAPTTVTFNTMINICGNHGRLEEV 335
Query: 134 K---KFLDEMSC 142
+ ++E+ C
Sbjct: 336 SLLVRKMEELRC 347
>gi|7413543|emb|CAB86023.1| putative protein [Arabidopsis thaliana]
Length = 880
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 86/195 (44%), Gaps = 14/195 (7%)
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTY--- 117
E+AE L +++ + +Y+ MM Y V +K +V + +K P + TY
Sbjct: 431 ERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCL 490
Query: 118 -NLW--ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTL 174
NL+ + + L + +V K + G + Y ++N ++ NA +
Sbjct: 491 INLYTKVGKISKALEVSRVMK-------EEGVKHNLKTYSMMINGFVKLKDWANA-FAVF 542
Query: 175 VEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLML 234
+ K + I Y+ +I + G+GN D+ Q K ++ + + T+R ++ I+ Y
Sbjct: 543 EDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKS 602
Query: 235 GHLKEVGEIIDQWKQ 249
G ++ E+ D ++
Sbjct: 603 GDMRRSLEVFDMMRR 617
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 81/195 (41%), Gaps = 2/195 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT ++ YA T KA E F R++ L + Y ++ G+++ V +E+
Sbjct: 658 TYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEM 717
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+N+ + F YN+ I A ++ + + +M G D Y + ++ A
Sbjct: 718 SARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMK-KEGVKPDIHTYTSFISACSKAGD 776
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ N + T+ E E + TY LI +A +K ++ ++ K Y
Sbjct: 777 M-NRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYH 835
Query: 226 CILSSYLMLGHLKEV 240
C+L+S L + E
Sbjct: 836 CLLTSLLSRASIAEA 850
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 46/95 (48%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L++LY KA E+ +K+ + N Y+ M+ ++ + V E++
Sbjct: 486 TYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDM 545
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
++ + PD+ YN IS+ N+D+ + + EM
Sbjct: 546 VKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEM 580
>gi|357120648|ref|XP_003562037.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g23020-like [Brachypodium distachyon]
Length = 807
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 10/107 (9%)
Query: 46 TYTALLHLYAGAKWTEKAEELFER-------VKQSNLSFNALMYNEMMTLYMSVGQVEKV 98
T + +L Y A EKAE F R K+ + +N YN ++ Y GQ+EKV
Sbjct: 213 TMSTVLQAYKKAGEYEKAELFFRRWSSESHKRKEGHRCYNLYTYNTLIDTYGKAGQLEKV 272
Query: 99 ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVK---KFLDEMSC 142
+ ++ R+ VVPDIFT+N I ++QV + ++E C
Sbjct: 273 SDAFSQMLREGVVPDIFTFNTLIHVWGKHHRMEQVSSLVRMMEEFQC 319
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 81/171 (47%), Gaps = 4/171 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY++L+ L + AK EKA ++ + L + + Y+ +++ + + V + E+
Sbjct: 496 TYSSLIQLLSTAKLPEKALYYLRKMHAAELPIDCVPYSVIISSFAKKDNLHMVECLFREM 555
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ D + Y++ I + A N+ Q + ++ +G + Y +L+ +Y A +
Sbjct: 556 ATSGICADAYVYSILIDAYAEVGNVHQAAAYFGLVT-KAGLCESSTIYNSLIKLYTKAGY 614
Query: 166 LVNAESSTLVEAEKSI-TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMT 215
L AE+ + KS+ T + +I LY+ ++ +I++SL+ +
Sbjct: 615 L--AEAHETYKLLKSLDTDTNLYASNCMISLYSDHCMVNEAREIFESLKAS 663
>gi|302782654|ref|XP_002973100.1| hypothetical protein SELMODRAFT_442013 [Selaginella moellendorffii]
gi|300158853|gb|EFJ25474.1| hypothetical protein SELMODRAFT_442013 [Selaginella moellendorffii]
Length = 674
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 97/206 (47%), Gaps = 2/206 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T++ L++ + E+A + FER+K + + + YN ++ +Y VG+V + + E++
Sbjct: 180 TFSTLINCAKRCRQPEEALKWFERMKSEGIVPDEVTYNSVIDMYGRVGRVNEAVELYEKL 239
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K N D TY + A + + + + EM DSG S + V +N + ++ +
Sbjct: 240 KSVNWKLDTVTYGAIANVYARAGDYQSIIQLVQEMR-DSGSSPNAV-IMNTLMGTLSKAG 297
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
VN E S +T L+ +Y +G D+ +++++L+ K Y
Sbjct: 298 KVNQAKKVFNEMRTSGVSPTPVTLSILVEMYTRVGAYDQAFEVYETLKTEGWKCDVAVYN 357
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSA 251
++ + + G +++ +I+ + K++
Sbjct: 358 SLMKACVEGGRVEQAEDILKEMKRAG 383
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 66/135 (48%), Gaps = 2/135 (1%)
Query: 16 TRIDLMTKVFGIHSGERYFEGLPLS--AKTSETYTALLHLYAGAKWTEKAEELFERVKQS 73
T + ++K ++ ++ F + S + T T + L+ +Y ++A E++E +K
Sbjct: 288 TLMGTLSKAGKVNQAKKVFNEMRTSGVSPTPVTLSILVEMYTRVGAYDQAFEVYETLKTE 347
Query: 74 NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQV 133
+ +YN +M + G+VE+ +++E+KR PD TY +++ A +D
Sbjct: 348 GWKCDVAVYNSLMKACVEGGRVEQAEDILKEMKRAGCNPDHLTYRTAMNTYATKGMVDPA 407
Query: 134 KKFLDEMSCDSGGSD 148
++ D++ +G D
Sbjct: 408 RRMFDKVVALNGKPD 422
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 106/229 (46%), Gaps = 8/229 (3%)
Query: 58 KWTEKAEELFE--RVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIF 115
+W EKA FE + + N YN M+ + + Q+E +VEE+ + + PD +
Sbjct: 121 RW-EKALAFFEWLKARPELYEINRYTYNVMLKILRNGRQLELSEKLVEEMTGRGIQPDNY 179
Query: 116 TYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLV 175
T++ I+ ++ K+ + M + G D V Y +++++Y VN E+ L
Sbjct: 180 TFSTLINCAKRCRQPEEALKWFERMKSE-GIVPDEVTYNSVIDMYGRVGR-VN-EAVELY 236
Query: 176 EAEKSITQR-QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLML 234
E KS+ + +TY + +YA G+ I Q+ + +R + + ++ +
Sbjct: 237 EKLKSVNWKLDTVTYGAIANVYARAGDYQSIIQLVQEMRDSGSSPNAVIMNTLMGTLSKA 296
Query: 235 GHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 283
G + + ++ ++ + S S ++ + L+ ++ VG ++A E + L
Sbjct: 297 GKVNQAKKVFNEMRTSGVSPTPVT-LSILVEMYTRVGAYDQAFEVYETL 344
Score = 44.3 bits (103), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 44/94 (46%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y +L+ E+AE++ + +K++ + + L Y M Y + G V+ + +++
Sbjct: 356 YNSLMKACVEGGRVEQAEDILKEMKRAGCNPDHLTYRTAMNTYATKGMVDPARRMFDKVV 415
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
N PD + + I +C I+Q K DEM
Sbjct: 416 ALNGKPDTPLFTVMIRACKLAGEIEQASKIFDEM 449
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 44/249 (17%), Positives = 98/249 (39%), Gaps = 11/249 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY +L + + E +E+L E + + + ++ ++ Q E+ E +
Sbjct: 145 TYNVMLKILRNGRQLELSEKLVEEMTGRGIQPDNYTFSTLINCAKRCRQPEEALKWFERM 204
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDW----VKYVNLVNIYI 161
K + +VPD TYN I +++ + +++ S +W V Y + N+Y
Sbjct: 205 KSEGIVPDEVTYNSVIDMYGRVGRVNEAVELYEKLK-----SVNWKLDTVTYGAIANVYA 259
Query: 162 TASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 221
A + + E S + + + L+ + G ++ +++ +R + T
Sbjct: 260 RAGDY-QSIIQLVQEMRDSGSSPNAVIMNTLMGTLSKAGKVNQAKKVFNEMRTSGVSPTP 318
Query: 222 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 281
++ Y +G + E+ + K D++ N L+ A + G E+A +
Sbjct: 319 VTLSILVEMYTRVGAYDQAFEVYETLKTEGWK-CDVAVYNSLMKACVEGGRVEQAEDILK 377
Query: 282 LLLQKNCAP 290
+ + C P
Sbjct: 378 EMKRAGCNP 386
>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 99/232 (42%), Gaps = 3/232 (1%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y+A++ A+ LF +++ + + YN M+ + S G+ +++E+
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML 317
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
+ + PD+ TYN I++ + ++ DEM G + + Y ++++ + + L
Sbjct: 318 ERKISPDVVTYNALINAFVKEGKFFEAEELYDEM-LPRGIIPNTITYSSMIDGFCKQNRL 376
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 226
AE + A K + IT++ LI Y G D ++ + T + Y
Sbjct: 377 DAAEHMFYLMATKGCSP-NLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435
Query: 227 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 278
++ + ++G L +++ + S DI C+ LL D G + A E
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCP-DIVTCDTLLDGLCDNGKLKDALE 486
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 57/131 (43%), Gaps = 2/131 (1%)
Query: 82 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 141
YN +++ ++ G+ + + EE+ + +VPD TY+ I +D+ + D M
Sbjct: 514 YNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMG 573
Query: 142 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 201
S S + V + L+N Y A V+ E + ITY LI + +GN
Sbjct: 574 SKS-FSPNVVTFTTLINGYCKAGR-VDDGLELFCEMGRRGIVANAITYITLICGFRKVGN 631
Query: 202 KDKIDQIWKSL 212
+ I++ +
Sbjct: 632 INGALDIFQEM 642
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 78/177 (44%), Gaps = 8/177 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY AL++ + +AEEL++ + + N + Y+ M+ + +++ + +
Sbjct: 327 TYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLM 386
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K P++ T+N I ID + L EM+ ++G D Y L++ +
Sbjct: 387 ATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMT-ETGLVADTTTYNTLIHGFYLVGD 445
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKID---QIWKSLRMTKQKM 219
L NA L E S +T D L+ GL + K+ +++K ++ +K+ +
Sbjct: 446 L-NAALDLLQEMISSGLCPDIVTCDTLL---DGLCDNGKLKDALEMFKVMQKSKKDL 498
>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 99/232 (42%), Gaps = 3/232 (1%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y+A++ A+ LF +++ + + YN M+ + S G+ +++E+
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML 317
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
+ + PD+ TYN I++ + ++ DEM G + + Y ++++ + + L
Sbjct: 318 ERKISPDVVTYNALINAFVKEGKFFEAEELYDEM-LPRGIIPNTITYSSMIDGFCKQNRL 376
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 226
AE + A K + IT++ LI Y G D ++ + T + Y
Sbjct: 377 DAAEHMFYLMATKGCSP-NLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435
Query: 227 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 278
++ + ++G L +++ + S DI C+ LL D G + A E
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCP-DIVTCDTLLDGLCDNGKLKDALE 486
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 57/131 (43%), Gaps = 2/131 (1%)
Query: 82 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 141
YN +++ ++ G+ + + EE+ + +VPD TY+ I +D+ + D M
Sbjct: 514 YNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMG 573
Query: 142 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 201
S S + V + L+N Y A V+ E + ITY LI + +GN
Sbjct: 574 SKS-FSPNVVTFTTLINGYCKAGR-VDDGLELFCEMGRRGIVANAITYITLICGFRKVGN 631
Query: 202 KDKIDQIWKSL 212
+ I++ +
Sbjct: 632 INGALDIFQEM 642
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 78/177 (44%), Gaps = 8/177 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY AL++ + +AEEL++ + + N + Y+ M+ + +++ + +
Sbjct: 327 TYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLM 386
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K P++ T+N I ID + L EM+ ++G D Y L++ +
Sbjct: 387 ATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMT-ETGLVADTTTYNTLIHGFYLVGD 445
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKID---QIWKSLRMTKQKM 219
L NA L E S +T D L+ GL + K+ +++K ++ +K+ +
Sbjct: 446 L-NAALDLLQEMISSGLCPDIVTCDTLL---DGLCDNGKLKDALEMFKVMQKSKKDL 498
>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
Length = 1024
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/202 (19%), Positives = 92/202 (45%), Gaps = 3/202 (1%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
+T +A +H ++A ++F +K+ L + Y+ +++ + G+VEK + +E
Sbjct: 614 QTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDE 673
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+ K + P+IF YN + + +I + +K D M + G D V Y +++ Y +
Sbjct: 674 MCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMP-EKGLEPDSVTYSTMIDGYCKSE 732
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
++ A S E Q Y+ L+ G+ +K +++ + + K T+ ++
Sbjct: 733 NVAEA-FSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREM-LQKGFATTLSF 790
Query: 225 ICILSSYLMLGHLKEVGEIIDQ 246
++ Y ++E ++ +
Sbjct: 791 NTLIDGYCKSCKIQEASQLFQE 812
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 100/245 (40%), Gaps = 3/245 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+Y A+++ K A +L E++ S L N ++Y+ ++ Y S G++E+ +++ +
Sbjct: 440 SYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGM 499
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
V PDIF YN IS + +++ +L E+ G D V + + Y
Sbjct: 500 SCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQ-GRGLKPDAVTFGAFILGYSKTGK 558
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ A + + + Y LI + GN + I++ L +
Sbjct: 559 MTEAAKYFDEMLDHGLMPNNPL-YTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCS 617
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 285
+ L G ++E ++ + K+ D+ + L+ F G EKA E H +
Sbjct: 618 AFIHGLLKNGRVQEALKVFSELKEKGLVP-DVFTYSSLISGFCKQGEVEKAFELHDEMCL 676
Query: 286 KNCAP 290
K AP
Sbjct: 677 KGIAP 681
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/249 (20%), Positives = 106/249 (42%), Gaps = 7/249 (2%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
S T+ L+ Y +A EL + +++ NL +A+ Y M+ + ++E
Sbjct: 403 SRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLE 462
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
++ + P++ Y++ I + A+ I++ ++ LD MSC SG + D Y +++ A
Sbjct: 463 KMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSC-SGVAPDIFCYNAIISCLSKA 521
Query: 164 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 223
+ A S+ L+E + + +T+ I+ Y+ G + + + M + N
Sbjct: 522 GKMEEA-STYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFD--EMLDHGLMPNN 578
Query: 224 --YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 281
Y +++ + G+L E I + D+ C+ + G ++A +
Sbjct: 579 PLYTVLINGHFKAGNLMEALSIFRRLHALGVLP-DVQTCSAFIHGLLKNGRVQEALKVFS 637
Query: 282 LLLQKNCAP 290
L +K P
Sbjct: 638 ELKEKGLVP 646
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT ++ + A E+A LF+ +++ NL + + Y +M Y +GQ +V + E++
Sbjct: 824 TYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKM 883
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
K V PD TY L I + N+ + K DE+
Sbjct: 884 VAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEV 918
Score = 40.8 bits (94), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 39/206 (18%), Positives = 85/206 (41%), Gaps = 6/206 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT L+ A+ + + + L+ N +Y+ ++ VG +++ + +
Sbjct: 230 TYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSM 289
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K +VP+ +TY + + +++ K +EM +G D+ L++ ++
Sbjct: 290 GEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQ-KTGLKPDYNACSALIDGFMREGD 348
Query: 166 L--VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 223
+ V +V I ITY+ LI G +K +I K + K SR
Sbjct: 349 IDEVLRIKDVMVSCGIPI---NLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRT 405
Query: 224 YICILSSYLMLGHLKEVGEIIDQWKQ 249
+ ++ Y ++ E++D+ ++
Sbjct: 406 FCLLIEGYCREHNMGRALELLDEMEK 431
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 41/205 (20%), Positives = 85/205 (41%), Gaps = 13/205 (6%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVK 71
Y +D + K I + F+G+P S TY+ ++ Y ++ +A LF +
Sbjct: 686 YNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMP 745
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
+ ++ +YN ++ G +EK + E+ +K + ++N I + I
Sbjct: 746 SKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKIQ 804
Query: 132 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWI---- 187
+ + EM D V Y +++ + A + E++ L K + +R I
Sbjct: 805 EASQLFQEMIAKQ-IMPDHVTYTTVIDWHCKAGKM--EEANLLF---KEMQERNLIVDTV 858
Query: 188 TYDFLIILYAGLGNKDKIDQIWKSL 212
TY L+ Y LG ++ +++ +
Sbjct: 859 TYTSLMYGYNKLGQSSEVFALFEKM 883
>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
Length = 577
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 3/157 (1%)
Query: 15 ATRIDLMTKVFGIHSGERYFEGLPLS--AKTSETYTALLHLYAGAKWTEKAEELFERVKQ 72
+T ID ++K I + R F+ + A Y+AL+H A+ + A E+ ++K+
Sbjct: 411 STMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKK 470
Query: 73 SNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQ 132
+ + + + YN ++ G VE +E+ PD++TYN+ IS N D
Sbjct: 471 AFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDA 530
Query: 133 VKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 169
D+MS S S + V Y L++ L A
Sbjct: 531 ACGVFDDMS-SSRCSANVVTYGALISGLCKRRQLTKA 566
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 67/146 (45%), Gaps = 2/146 (1%)
Query: 15 ATRIDLMTKVFGIHSGERYFEGLPLS--AKTSETYTALLHLYAGAKWTEKAEELFERVKQ 72
+T ID ++K I + R F+ + A Y+AL+H A+ + A E+ ++K+
Sbjct: 130 STMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKK 189
Query: 73 SNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQ 132
+ + + + YN ++ G VE +E+ PD++TYN+ IS N D
Sbjct: 190 AFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDA 249
Query: 133 VKKFLDEMSCDSGGSDDWVKYVNLVN 158
L + + +G + D Y +V+
Sbjct: 250 ASHSLAQETTINGCTIDIHTYTAIVD 275
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 98/250 (39%), Gaps = 13/250 (5%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYTA++ A K E+A L E++ + + YN ++ +G++E+ ++ +I
Sbjct: 269 TYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKI 328
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
PD+ TY I + K EM+ G + D V Y L+ +
Sbjct: 329 VDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMAL-RGLALDTVCYTALIRELLQTGK 387
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLII--LYAGLGNKDKID---QIWKSLRMTKQKMT 220
+ A S K++T + D + + + GL +I +I+KS+
Sbjct: 388 IPQASS-----VYKTMTSHGCVP-DVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPN 441
Query: 221 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 280
Y ++ + E++ Q K++ + I+ N L+ G E A F
Sbjct: 442 EVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITY-NILIDGLCKSGDVEAARAFF 500
Query: 281 MLLLQKNCAP 290
+L+ C P
Sbjct: 501 DEMLEAGCKP 510
Score = 40.4 bits (93), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 64/148 (43%), Gaps = 2/148 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT+L+ K + +A +LF+ + L+ + + Y ++ + G++ + + V + +
Sbjct: 58 TYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTM 117
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
VPD+ T + I + I + M G + + V Y L++ A
Sbjct: 118 TSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSME-ARGLAPNEVVYSALIHGLCKARK 176
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLI 193
+ + L + +K+ ITY+ LI
Sbjct: 177 M-DCALEMLAQMKKAFCTPDTITYNVLI 203
>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
Length = 570
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 69/157 (43%), Gaps = 3/157 (1%)
Query: 15 ATRIDLMTKVFGIHSGERYFEGLPLS--AKTSETYTALLHLYAGAKWTEKAEELFERVKQ 72
+T ID + K I + R F+ + A Y+AL+H A+ + A E+ ++K+
Sbjct: 309 STMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKK 368
Query: 73 SNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQ 132
+ + + + YN ++ G VE +E+ PD++TYN+ +S N D
Sbjct: 369 AFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDA 428
Query: 133 VKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 169
D+MS S S + V Y L++ L A
Sbjct: 429 ACGVFDDMS-SSHCSPNVVTYGTLISGLCKRRQLTKA 464
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 97/250 (38%), Gaps = 13/250 (5%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYTA++ A K + A L E++ + + YN ++ +G++E+ ++ +I
Sbjct: 167 TYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKI 226
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
PD+ TY I + K EM+ G D V Y L+ + A
Sbjct: 227 VDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMAL-RGLVLDTVCYTALIRGLLQAGK 285
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLII--LYAGLGNKDKID---QIWKSLRMTKQKMT 220
+ A S K++T Q D + + + GL +I +I+KS+
Sbjct: 286 IPQASS-----VYKTMTS-QGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPN 339
Query: 221 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 280
Y ++ + E++ Q K++ + I+ N L+ G E A F
Sbjct: 340 EVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITY-NILIDGLCKSGDVEAARAFF 398
Query: 281 MLLLQKNCAP 290
+L+ C P
Sbjct: 399 DEMLEAGCKP 408
>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 99/232 (42%), Gaps = 3/232 (1%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y+A++ A+ LF +++ + + YN M+ + S G+ +++E+
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML 317
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
+ + PD+ TYN I++ + ++ DEM G + + Y ++++ + + L
Sbjct: 318 ERKISPDVVTYNALINAFVKEGKFFEAEELYDEM-LPRGIIPNTITYSSMIDGFCKQNRL 376
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 226
AE + A K + IT++ LI Y G D ++ + T + Y
Sbjct: 377 DAAEHMFYLMATKGCSP-NLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435
Query: 227 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 278
++ + ++G L +++ + S DI C+ LL D G + A E
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCP-DIVTCDTLLDGLCDNGKLKDALE 486
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 57/131 (43%), Gaps = 2/131 (1%)
Query: 82 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 141
YN +++ ++ G+ + + EE+ + +VPD TY+ I +D+ + D M
Sbjct: 514 YNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMG 573
Query: 142 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 201
S S + V + L+N Y A V+ E + ITY LI + +GN
Sbjct: 574 SKS-FSPNVVTFTTLINGYCKAGR-VDDGLELFCEMGRRGIVANAITYITLICGFRKVGN 631
Query: 202 KDKIDQIWKSL 212
+ I++ +
Sbjct: 632 INGALDIFQEM 642
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 78/177 (44%), Gaps = 8/177 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY AL++ + +AEEL++ + + N + Y+ M+ + +++ + +
Sbjct: 327 TYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLM 386
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K P++ T+N I ID + L EM+ ++G D Y L++ +
Sbjct: 387 ATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMT-ETGLVADTTTYNTLIHGFYLVGD 445
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKID---QIWKSLRMTKQKM 219
L NA L E S +T D L+ GL + K+ +++K ++ +K+ +
Sbjct: 446 L-NAALDLLQEMISSGLCPDIVTCDTLL---DGLCDNGKLKDALEMFKVMQKSKKDL 498
>gi|302786806|ref|XP_002975174.1| hypothetical protein SELMODRAFT_10825 [Selaginella moellendorffii]
gi|300157333|gb|EFJ23959.1| hypothetical protein SELMODRAFT_10825 [Selaginella moellendorffii]
Length = 555
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/210 (20%), Positives = 94/210 (44%), Gaps = 10/210 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY+A++ LY A T +A +L++ ++++N + + + + +Y VG + + + ++
Sbjct: 101 TYSAMIDLYGKAGRTAEAMDLYQTMRKNNWKPDLVSFGVIANVYSRVGDYQAILRLFRDM 160
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
++ + P++ +N I + + K DEM+ G + L+++Y
Sbjct: 161 EQAEIKPNVVLFNTLIGTLGRAGKVTLAKGMFDEMA-SYGLEPSEITLSILIDMYTKVGA 219
Query: 166 LVNAESSTLVEAEKSITQRQW----ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 221
L A ++ +I Q++W + Y+ L+ GN + + + + KQ
Sbjct: 220 LDKA-----LDVYDTIKQKKWKLDVLVYNTLLKSCVESGNIQRAESLIAEMEREKQWPDH 274
Query: 222 RNYICILSSYLMLGHLKEVGEIIDQWKQSA 251
Y +++ Y G + EV + D+ K A
Sbjct: 275 MTYGILMNVYATKGMVAEVRAMFDKLKNLA 304
Score = 40.8 bits (94), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 38/199 (19%), Positives = 86/199 (43%), Gaps = 8/199 (4%)
Query: 60 TEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNL 119
E A F R++++ +SF+ + Y+ M+ LY G+ + + + +++ N PD+ ++ +
Sbjct: 80 AEDAIAWFHRLRETGVSFDGVTYSAMIDLYGKAGRTAEAMDLYQTMRKNNWKPDLVSFGV 139
Query: 120 WISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK 179
+ + + + + +M + + V + L+ A + A+ A
Sbjct: 140 IANVYSRVGDYQAILRLFRDME-QAEIKPNVVLFNTLIGTLGRAGKVTLAKGMFDEMASY 198
Query: 180 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 239
+ + IT LI +Y +G DK ++ +++ K K+ Y +L S + G+++
Sbjct: 199 GLEPSE-ITLSILIDMYTKVGALDKALDVYDTIKQKKWKLDVLVYNTLLKSCVESGNIQR 257
Query: 240 VGEII------DQWKQSAT 252
+I QW T
Sbjct: 258 AESLIAEMEREKQWPDHMT 276
>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 99/232 (42%), Gaps = 3/232 (1%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y+A++ A+ LF +++ + + YN M+ + S G+ +++E+
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML 317
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
+ + PD+ TYN I++ + ++ DEM G + + Y ++++ + + L
Sbjct: 318 ERKISPDVVTYNALINAFVKEGKFFEAEELYDEM-LPRGIIPNTITYSSMIDGFCKQNRL 376
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 226
AE + A K + IT++ LI Y G D ++ + T + Y
Sbjct: 377 DAAEHMFYLMATKGCSP-NLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435
Query: 227 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 278
++ + ++G L +++ + S DI C+ LL D G + A E
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCP-DIVTCDTLLDGLCDNGKLKDALE 486
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 57/131 (43%), Gaps = 2/131 (1%)
Query: 82 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 141
YN +++ ++ G+ + + EE+ + +VPD TY+ I +D+ + D M
Sbjct: 514 YNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMG 573
Query: 142 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 201
S S + V + L+N Y A V+ E + ITY LI + +GN
Sbjct: 574 SKS-FSPNVVTFTTLINGYCKAGR-VDDGLELFCEMGRRGIVANAITYITLICGFRKVGN 631
Query: 202 KDKIDQIWKSL 212
+ I++ +
Sbjct: 632 INGALDIFQEM 642
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 78/177 (44%), Gaps = 8/177 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY AL++ + +AEEL++ + + N + Y+ M+ + +++ + +
Sbjct: 327 TYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLM 386
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K P++ T+N I ID + L EM+ ++G D Y L++ +
Sbjct: 387 ATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMT-ETGLVADTTTYNTLIHGFYLVGD 445
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKID---QIWKSLRMTKQKM 219
L NA L E S +T D L+ GL + K+ +++K ++ +K+ +
Sbjct: 446 L-NAALDLLQEMISSGLCPDIVTCDTLL---DGLCDNGKLKDALEMFKVMQKSKKDL 498
>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Glycine max]
Length = 623
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 62/115 (53%), Gaps = 1/115 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT+L+++ ++A+ LF +++Q L + +++N ++ + + G +++ +++E+
Sbjct: 428 TYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEM 487
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
V+PD TYN + +++ ++ LDEM G D + Y L++ Y
Sbjct: 488 DNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMK-RRGIKPDHISYNTLISGY 541
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/201 (18%), Positives = 84/201 (41%), Gaps = 2/201 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+ ++++ +KA+E ++ + N + YN ++ + G+ ++ ++ + +
Sbjct: 218 TFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTM 277
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K K + PD +TYN +IS +++ + +M + G + V Y L++ Y
Sbjct: 278 KDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKM-LEGGLVPNAVTYNALIDGYCNKGD 336
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
L A + K I +TY+ I G D + K +R + +
Sbjct: 337 LDKAYAYRDEMISKGIMA-SLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHN 395
Query: 226 CILSSYLMLGHLKEVGEIIDQ 246
+++ Y G K ++D+
Sbjct: 396 ILINGYCRCGDAKRAFGLLDE 416
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 51/102 (50%)
Query: 39 LSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV 98
+ AKT+ + L+ Y K +A E F +K+ N N+M++L++ + + +
Sbjct: 141 VDAKTTLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMA 200
Query: 99 ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
++ E+ R N+ ++T+N+ I+ + + K+F+ M
Sbjct: 201 WVLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHM 242
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 44/104 (42%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L+ Y E+A +L + +K+ + + + YN +++ Y G ++ V +E+
Sbjct: 498 TYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEM 557
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDD 149
P I TYN I + ++ L EM DD
Sbjct: 558 MTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDD 601
>gi|414883803|tpg|DAA59817.1| TPA: hypothetical protein ZEAMMB73_625576 [Zea mays]
Length = 350
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 94/217 (43%), Gaps = 7/217 (3%)
Query: 34 FEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQS---NLSFNALMYNEMMTL 88
F +P T + +Y AL+ K +++A EL + + N S + + YN ++
Sbjct: 88 FRRMPELGYTPDVFSYNALIKGLCAEKKSQEALELLLHMTANGGYNCSPDVVSYNIVIDG 147
Query: 89 YMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSD 148
G+V+K + E+ + PD+ TY+ I +D+ + L +M G
Sbjct: 148 LFKEGEVDKAYFLFHEMPGQGFPPDLVTYSSVIDGLCKAQAMDKAEASLQQML-YKGVMP 206
Query: 149 DWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQI 208
+ Y +L++ Y + LV A L + Q +TY+ LI Y +G + I
Sbjct: 207 NTRPYNSLIHGYCSLGQLVEA-VRLLKKMSGGGLQLNVVTYNMLIDYYCKIGRCAEARSI 265
Query: 209 WKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIID 245
+ S+ QK + Y +L Y G L ++ +++D
Sbjct: 266 FDSMVRRGQKPNATTYCSLLHGYATKGALVDMHDLLD 302
Score = 40.4 bits (93), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 73/170 (42%), Gaps = 6/170 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY++++ A+ +KAE +++ + N YN ++ Y S+GQ+ + +++++
Sbjct: 175 TYSSVIDGLCKAQAMDKAEASLQQMLYKGVMPNTRPYNSLIHGYCSLGQLVEAVRLLKKM 234
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ ++ TYN+ I + + D M G + Y +L++ Y T
Sbjct: 235 SGGGLQLNVVTYNMLIDYYCKIGRCAEARSIFDSMV-RRGQKPNATTYCSLLHGYATKGA 293
Query: 166 LVNAES--STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 213
LV+ ++ I R ++ LI YA DK ++ +R
Sbjct: 294 LVDMHDLLDLMIRDGIPIEHR---VFNILIYAYAKHETVDKAMAVFAEMR 340
>gi|297847014|ref|XP_002891388.1| hypothetical protein ARALYDRAFT_336905 [Arabidopsis lyrata subsp.
lyrata]
gi|297337230|gb|EFH67647.1| hypothetical protein ARALYDRAFT_336905 [Arabidopsis lyrata subsp.
lyrata]
Length = 310
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 56/114 (49%), Gaps = 1/114 (0%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M K F + DYA R+ L+ V G+ E++FE +P + + Y LL Y ++ T
Sbjct: 79 MCEQKFFNIFSEDYAARLHLVETVLGLEEAEKFFESIPENMRDYSVYDNLLRSYTKSEKT 138
Query: 61 -EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPD 113
+KAE FE+++ +N M++LY + + + V + E+ +V D
Sbjct: 139 LDKAEATFEKMRDLGFLLKPSPFNSMISLYRHLKKKDMVKKLEREMMENDVRFD 192
>gi|224090111|ref|XP_002308939.1| predicted protein [Populus trichocarpa]
gi|222854915|gb|EEE92462.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 109/236 (46%), Gaps = 7/236 (2%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
++ Y ++ L+A WT++A LF +++ +A N ++ + GQ ++E
Sbjct: 135 TDIYNMMIRLHARHNWTDQARGLFFEMQKWRCKPDAETCNALINAHGRSGQWRWAMNIME 194
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
++ +K + P TYN I++C ++ N + K +M+ ++G D V + +++ Y T
Sbjct: 195 DMLQKAIPPSRSTYNNLINACGSSGNWREALKLCKKMT-ENGVGPDLVTHNIILSAYKTG 253
Query: 164 SHLVNAESSTLVEAEKSITQRQ-WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 222
+ A++ + E K R T + +I LG +K I+KS+R + +
Sbjct: 254 AQY--AKALSYFELMKGTNIRPDTTTLNIIIYCLTKLGQYEKAIGIFKSMREKRAECHPD 311
Query: 223 --NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
+ I+ Y + G ++ + +I + N L+GA++ G+ ++A
Sbjct: 312 VVTFTSIIHLYSVNGQIENCRAVFSTMVAEGLKP-NIVSYNTLMGAYASHGMNKEA 366
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 103/245 (42%), Gaps = 11/245 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+Y L+ YA ++A +F +K S L + + Y ++ Y Q +K V E +
Sbjct: 349 SYNTLMGAYASHGMNKEALSVFNAIKNSGLRPDVVSYTSLLNSYGRSQQPKKAREVFEMM 408
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
KR + P+I +YN I + + + + + L EM D G + V L+ S
Sbjct: 409 KRDKLKPNIVSYNAMIDAYGSNGLLAEAVEVLREMEQD-GIYPNAVSICTLLAACGRCSR 467
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
VN + L AE+ + I Y+ I Y +G +K +++S+R +K + +
Sbjct: 468 KVNIDV-VLQAAERRHIKLNTIAYNSAIGSYMNVGEFEKATSMYRSMRKSKVIPDAVTFT 526
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 285
++S + E E + S D I A+S +TE + F+ + +
Sbjct: 527 VLISGCCKMTKYCEALEFL-----SEMMDLKIPMTKE---AYSSGKITEAESMFNKMKMA 578
Query: 286 KNCAP 290
C+P
Sbjct: 579 -GCSP 582
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 85/205 (41%), Gaps = 2/205 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+T+++HLY+ E +F + L N + YN +M Y S G ++ V I
Sbjct: 314 TFTSIIHLYSVNGQIENCRAVFSTMVAEGLKPNIVSYNTLMGAYASHGMNKEALSVFNAI 373
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K + PD+ +Y ++S + + ++ + M D + V Y +++ Y +
Sbjct: 374 KNSGLRPDVVSYTSLLNSYGRSQQPKKAREVFEMMKRDK-LKPNIVSYNAMIDAYGSNGL 432
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
L A L E E+ ++ L+ K ID + ++ K+ + Y
Sbjct: 433 LAEA-VEVLREMEQDGIYPNAVSICTLLAACGRCSRKVNIDVVLQAAERRHIKLNTIAYN 491
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQS 250
+ SY+ +G ++ + ++S
Sbjct: 492 SAIGSYMNVGEFEKATSMYRSMRKS 516
>gi|115485519|ref|NP_001067903.1| Os11g0482400 [Oryza sativa Japonica Group]
gi|77550880|gb|ABA93677.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
gi|113645125|dbj|BAF28266.1| Os11g0482400 [Oryza sativa Japonica Group]
Length = 770
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 110/240 (45%), Gaps = 21/240 (8%)
Query: 51 LHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL---------- 100
++LY T++A LFE+++ +++ + +N M++ Y + K L
Sbjct: 323 MYLYLRKGETDEAMRLFEQMEDASI----ITWNAMISGYAQIMDSAKDDLQARSRGFQAL 378
Query: 101 -VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 159
+ ++KR + PD+FT++ +S C+A + ++Q ++ + + SG D V LVN+
Sbjct: 379 TIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQ-IHAQTIKSGFLSDVVVNSALVNM 437
Query: 160 YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 219
Y + +A + L + R ++T+ +I Y+ G + Q+++ +R+ +
Sbjct: 438 YNKCGCIQDANKAFL-----EMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRP 492
Query: 220 TSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 279
++ +LS+ G ++E D K+ + + ++ F +G E A F
Sbjct: 493 NEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSF 552
>gi|308044519|ref|NP_001183314.1| uncharacterized protein LOC100501715 [Zea mays]
gi|238010730|gb|ACR36400.1| unknown [Zea mays]
Length = 320
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 94/217 (43%), Gaps = 7/217 (3%)
Query: 34 FEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQS---NLSFNALMYNEMMTL 88
F +P T + +Y AL+ K +++A EL + + N S + + YN ++
Sbjct: 88 FRRMPELGYTPDVFSYNALIKGLCAEKKSQEALELLLHMTANGGYNCSPDVVSYNIVIDG 147
Query: 89 YMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSD 148
G+V+K + E+ + PD+ TY+ I +D+ + L +M G
Sbjct: 148 LFKEGEVDKAYFLFHEMPGQGFPPDLVTYSSVIDGLCKAQAMDKAEASLQQML-YKGVMP 206
Query: 149 DWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQI 208
+ Y +L++ Y + LV A L + Q +TY+ LI Y +G + I
Sbjct: 207 NTRPYNSLIHGYCSLGQLVEA-VRLLKKMSGGGLQLNVVTYNMLIDYYCKIGRCAEARSI 265
Query: 209 WKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIID 245
+ S+ QK + Y +L Y G L ++ +++D
Sbjct: 266 FDSMVRRGQKPNATTYCSLLHGYATKGALVDMHDLLD 302
Score = 37.4 bits (85), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 21/106 (19%), Positives = 45/106 (42%), Gaps = 2/106 (1%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVK 71
Y++ ID + K + E + + + Y +L+H Y +A L +++
Sbjct: 176 YSSVIDGLCKAQAMDKAEASLQQMLYKGVMPNTRPYNSLIHGYCSLGQLVEAVRLLKKMS 235
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTY 117
L N + YN ++ Y +G+ + + + + R+ P+ TY
Sbjct: 236 GGGLQLNVVTYNMLIDYYCKIGRCAEARSIFDSMVRRGQKPNATTY 281
>gi|357509703|ref|XP_003625140.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500155|gb|AES81358.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 855
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 82/195 (42%), Gaps = 2/195 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+Y ALL YA +A ++F +KQ+ + + Y ++ Y + +K + + I
Sbjct: 364 SYNALLGAYAARGMENEALQVFNEIKQNGFRPDVVSYTSLLNAYGRSRKPQKAREIFKMI 423
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
KR N+ P+I +YN I + + ++ + L EM D + V L+
Sbjct: 424 KRNNLKPNIVSYNALIDAYGSNGLLEDAIEILREMEQDK-IHPNVVSICTLLAACGRCGQ 482
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
V + + L AE + + Y+ I Y +G DK ++ S+R K K S Y
Sbjct: 483 KVKID-TVLSAAEMRGIKLNTVAYNSAIGSYINVGEYDKAIDLYNSMRKKKIKSDSVTYT 541
Query: 226 CILSSYLMLGHLKEV 240
++S + E
Sbjct: 542 VLISGCCKMSKFGEA 556
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 95/224 (42%), Gaps = 8/224 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+T+++HLY+ E E F + L N + YN ++ Y + G + V EI
Sbjct: 329 TFTSMIHLYSVCGHIENCEAAFNMMLAEGLKPNIVSYNALLGAYAARGMENEALQVFNEI 388
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K+ PD+ +Y +++ + + ++ +M + + V Y L++ Y +
Sbjct: 389 KQNGFRPDVVSYTSLLNAYGRSRKPQKAREIF-KMIKRNNLKPNIVSYNALIDAYGSNGL 447
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
L +A L E E+ ++ L+ G K KID + + M K+ + Y
Sbjct: 448 LEDA-IEILREMEQDKIHPNVVSICTLLAACGRCGQKVKIDTVLSAAEMRGIKLNTVAYN 506
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQ------SATSDFDISACNRL 263
+ SY+ +G + ++ + ++ S T IS C ++
Sbjct: 507 SAIGSYINVGEYDKAIDLYNSMRKKKIKSDSVTYTVLISGCCKM 550
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 106/238 (44%), Gaps = 11/238 (4%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
++ Y ++ L+A T++A LF +++ +A YN ++ + GQ +++
Sbjct: 150 TDIYNMMIRLHARHNRTDQARGLFFEMQKCRCKPDAETYNALINAHGRAGQWRWAMNIMD 209
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
++ R + P TYN I++C ++ N + +M+ D+G D V + NI +TA
Sbjct: 210 DMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMT-DNGVGPDLVTH----NIMLTA 264
Query: 164 --SHLVNAESSTLVEAEKSITQRQ-WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 220
S +++ + E K R T++ +I L DK I+ S++ K +
Sbjct: 265 FKSGTQYSKALSYFELIKGTHIRPDTTTHNIIIHCLVKLKQYDKAVDIFNSMKEKKSECH 324
Query: 221 SR--NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
+ ++ Y + GH++ + +I + N LLGA++ G+ +A
Sbjct: 325 PDVVTFTSMIHLYSVCGHIENCEAAFNMMLAEGLKP-NIVSYNALLGAYAARGMENEA 381
>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
Length = 757
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 95/221 (42%), Gaps = 8/221 (3%)
Query: 58 KWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTY 117
KW EKAEELF V + + + +N +M G+V + +++ + R V PD+ +Y
Sbjct: 427 KW-EKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISY 485
Query: 118 NLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA 177
N + T ID+ K LD + G D V Y L++ Y A + +A S
Sbjct: 486 NTLVDGHCLTGRIDEAAKLLDVI-VSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREML 544
Query: 178 EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHL 237
K +T +TY+ ++ G + +++ S+ ++ +M Y I++ L
Sbjct: 545 MKGLTP-DVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIING---LCKN 600
Query: 238 KEVGEIIDQWKQSATSD--FDISACNRLLGAFSDVGLTEKA 276
V E + + D DI N ++GA G E A
Sbjct: 601 NFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDA 641
Score = 40.8 bits (94), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 107/254 (42%), Gaps = 30/254 (11%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAG-AKWTEKAEELFERV 70
Y T ID + K + + F+ + + TYT L+H Y KW E ++ + +
Sbjct: 205 YTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVV-QMLQEM 263
Query: 71 KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 130
L + +Y ++ G+ + + + + RK + P++ Y + + A ++
Sbjct: 264 STHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSL 323
Query: 131 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA----EKSITQR-- 184
++ FLD M +G S D ++ NI A A+ + + EA +K QR
Sbjct: 324 SEMHSFLDLM-VGNGVSPDH----HIFNIMFCAY----AKKAMIDEAMHIFDKMRQQRLS 374
Query: 185 -QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI 243
+TY LI LG D D + K +M + MT ++ S L+ G
Sbjct: 375 PNIVTYGALIDALCKLGRVD--DAVLKFNQMIDEGMTPDIFV---FSSLVYGLCT----- 424
Query: 244 IDQWKQSATSDFDI 257
+D+W+++ F++
Sbjct: 425 VDKWEKAEELFFEV 438
>gi|302808862|ref|XP_002986125.1| hypothetical protein SELMODRAFT_44042 [Selaginella moellendorffii]
gi|300146273|gb|EFJ12944.1| hypothetical protein SELMODRAFT_44042 [Selaginella moellendorffii]
Length = 317
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 109/246 (44%), Gaps = 21/246 (8%)
Query: 49 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 108
A++ YA ++AEELF R + N++ ++ M+ Y +G +E + +E + ++
Sbjct: 84 AMVTRYAQNGHMQRAEELFRRAPER----NSVTWSVMVHAYARLGHLEDATITLERMPQQ 139
Query: 109 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVN 168
++ +Y IS+ ++ +K DE+ G V + +V Y H+
Sbjct: 140 SIA----SYTSIISASVEKGFVESARKLFDELPQYDNGFHCVVLWNAMVTGYAQNGHMQC 195
Query: 169 AESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICIL 228
AE E + +R +T+ ++ YA LG+ + D RM +Q + S Y I+
Sbjct: 196 AE-----ELFRRAPERNSVTWSVMVHAYARLGHLE--DATITLERMPQQSIAS--YTSII 246
Query: 229 SSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 288
S+ + G ++ + + + + D A ++ + GL EKA EF ++ +
Sbjct: 247 SASVEKGFVESARKFVF----NRLEERDAVAWTSIVLGHAQNGLAEKAVEFFSWMVMEGV 302
Query: 289 APTNAS 294
P + +
Sbjct: 303 EPVDVT 308
>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
Length = 855
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 89/203 (43%), Gaps = 8/203 (3%)
Query: 55 AGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDI 114
G +KA +L + + + + Y++++T +VEK L+ +E+K V PD+
Sbjct: 264 CGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDV 323
Query: 115 FTYNLWISS-CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES-- 171
+TY + I S C A L I+Q + +EM G S V Y L++ Y+ A + A
Sbjct: 324 YTYTILIDSFCKAGL-IEQAQWLFEEMR-SVGCSPTVVTYTALIHAYLKAKQVPQANDIF 381
Query: 172 STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSY 231
+V+A + +TY L+ GN K +++ L T S Y +
Sbjct: 382 HRMVDAG---CRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRH 438
Query: 232 LMLGHLKEVGEIIDQWKQSATSD 254
+ ++ G ++D ++ D
Sbjct: 439 TLAPNVVTYGALVDGLCKAHKVD 461
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 120/307 (39%), Gaps = 25/307 (8%)
Query: 4 HKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTE 61
K FV S Y+ I + + F+ + + T + TYT L+ + A E
Sbjct: 281 RKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIE 340
Query: 62 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 121
+A+ LFE ++ S + Y ++ Y+ QV + + + P+ TY +
Sbjct: 341 QAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALV 400
Query: 122 SSCAATLNIDQVKKFLDEM--SCDSGGSDDW-------------VKYVNLVNIYITASHL 166
NI + + ++ + DS SD + V Y LV+ + +H
Sbjct: 401 DGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVD-GLCKAHK 459
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM--TSRNY 224
V+ L S + I YD LI + G D +++ L+MTK + Y
Sbjct: 460 VDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVF--LQMTKCGYLPSVHTY 517
Query: 225 ICILSSYLMLGHLKEVGEIIDQW-KQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 283
++ G L +++ Q K S T ++ ++ +G +EKA + L+
Sbjct: 518 TSLIDRMFKDGRLDLAMKVLSQMLKDSCTP--NVVTYTAMIDGLCRIGESEKALKLLSLM 575
Query: 284 LQKNCAP 290
+K C+P
Sbjct: 576 EEKGCSP 582
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYTA++ +EKA +L +++ S N + Y ++ G+++ + ++
Sbjct: 551 TYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQM 610
Query: 106 KRKNVVPDIFTYNLWISS-CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 155
RK P+ TY + I+ CAA L +D+ + L EM W KY+
Sbjct: 611 SRKGCSPNYVTYRVLINHLCAAGL-LDKARLLLGEMK-----QTYWPKYLQ 655
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 96/247 (38%), Gaps = 21/247 (8%)
Query: 63 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 122
AE+++ + +N N + VG+ +K +++E+ RK VPD TY+ I+
Sbjct: 237 AEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVIT 296
Query: 123 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI- 181
+++ EM G + D Y L++ + A + A+ L E +S+
Sbjct: 297 FLCHATKVEKAFLLFQEMK-MVGVTPDVYTYTILIDSFCKAGLIEQAQ--WLFEEMRSVG 353
Query: 182 TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVG 241
+TY LI Y + + I+ + + Y ++ G++ +
Sbjct: 354 CSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAF 413
Query: 242 EIIDQW---KQSATSDFDISACNR--------LLGAFSDVGLTE--KANEFHMLL---LQ 285
E+ + SA SDF +R GA D GL + K + H LL L
Sbjct: 414 EVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVD-GLCKAHKVDHAHELLDAMLS 472
Query: 286 KNCAPTN 292
C P +
Sbjct: 473 SGCEPNH 479
>gi|125534384|gb|EAY80932.1| hypothetical protein OsI_36110 [Oryza sativa Indica Group]
Length = 770
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 110/240 (45%), Gaps = 21/240 (8%)
Query: 51 LHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL---------- 100
++LY T++A LFE+++ +++ + +N M++ Y + K L
Sbjct: 323 MYLYLRKGETDEAMRLFEQMEDASI----ITWNAMISGYAQIMDSAKDDLQARSRGFQAL 378
Query: 101 -VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 159
+ ++KR + PD+FT++ +S C+A + ++Q ++ + + SG D V LVN+
Sbjct: 379 TIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQ-IHAQTIKSGFLSDVVVNSALVNM 437
Query: 160 YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 219
Y + +A + L + R ++T+ +I Y+ G + Q+++ +R+ +
Sbjct: 438 YNKCGCIQDANKAFL-----EMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRP 492
Query: 220 TSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 279
++ +LS+ G ++E D K+ + + ++ F +G E A F
Sbjct: 493 NEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSF 552
>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Glycine max]
Length = 903
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 52/95 (54%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+TAL+ +A ELF+ + + + + YN ++ Y G+++K ++E++
Sbjct: 507 TFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDM 566
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
+K +VPD +TY IS +T + + K F+D++
Sbjct: 567 HQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDL 601
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 100/256 (39%), Gaps = 18/256 (7%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERV-KQSNLSF--NALMYNEMMTLYMSVGQVEKVAL 100
S T A+ L G + K ++ +E V K F N +YN ++ G ++K L
Sbjct: 327 SPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAEL 386
Query: 101 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
+ + N+ P+ TY++ I S + +D + D M D G + Y +L+N
Sbjct: 387 LYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYA-YNSLINGQ 445
Query: 161 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL----RMTK 216
L AE S +E + T+ LI Y K Q+ K+ +M
Sbjct: 446 CKFGDLSAAE-SLFIEMTNKGVEPTATTFTSLISGYC------KDLQVQKAFKLYNKMID 498
Query: 217 QKMTSRNY--ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTE 274
+T Y ++S + E E+ D+ + +++ N L+ + G +
Sbjct: 499 NGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTY-NVLIEGYCRDGKID 557
Query: 275 KANEFHMLLLQKNCAP 290
KA E + QK P
Sbjct: 558 KAFELLEDMHQKGLVP 573
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 58/121 (47%), Gaps = 2/121 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYTAL++ A ++A LF+R++ +N+ N++ Y + G + K A+ +
Sbjct: 717 TYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNM-KEAIGLHHA 775
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K ++ + T+N+ I + K L EM+ ++G D V Y L+ Y + +
Sbjct: 776 MLKGLLANTVTHNIIIRGFCKLGRFHEATKVLSEMT-ENGIFPDCVTYSTLIYEYCRSGN 834
Query: 166 L 166
+
Sbjct: 835 V 835
Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 88/233 (37%), Gaps = 37/233 (15%)
Query: 42 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 101
T TY L+ Y +KA EL E + Q L + Y +++ S G+V K
Sbjct: 538 PTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDF 597
Query: 102 VEEIKRKNVVPDIFTYNLWI--------------SSCAAT---LNIDQV----------- 133
++++ ++NV + Y+ + +SC +N+D V
Sbjct: 598 IDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALK 657
Query: 134 ----KKFLDEMS--CDSGGSDDWVKYVNLVNIYITASHLVNA-ESSTLVEAEKSITQRQW 186
K F D + D G D V Y ++++ Y A E L+ E+
Sbjct: 658 QPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPN--V 715
Query: 187 ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 239
+TY L+ G D+ ++K ++ S Y C L + G++KE
Sbjct: 716 VTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKE 768
Score = 37.0 bits (84), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 20/99 (20%), Positives = 50/99 (50%)
Query: 42 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 101
T+ T+T+L+ Y +KA +L+ ++ + ++ N + +++ S ++ + + +
Sbjct: 468 PTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASEL 527
Query: 102 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
+E+ + + P TYN+ I ID+ + L++M
Sbjct: 528 FDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDM 566
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 86/172 (50%), Gaps = 12/172 (6%)
Query: 46 TYTALLH-LYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
TYTAL++ L ++W++ A L + +K+ ++ N + Y+ ++ ++ G+V + + EE
Sbjct: 330 TYTALVNGLCNSSRWSDAARLLSDMIKK-KITPNVITYSALLDAFVKNGKVLEAKELFEE 388
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+ R ++ PDI TY+ I+ ID+ + D M G D V Y L+N + A
Sbjct: 389 MVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLM-VSKGCLADVVSYNTLINGFCKAK 447
Query: 165 HLVNAESSTLVEAEKSITQR----QWITYDFLIILYAGLGNKDKIDQIWKSL 212
+ + ++ + ++QR +TY+ LI + G+ DK + + +
Sbjct: 448 RVEDG-----MKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 494
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 51/255 (20%), Positives = 103/255 (40%), Gaps = 47/255 (18%)
Query: 6 EFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--------TYTALLHLYAGA 57
EF++S + + T + G +R EG+ + + S+ TY L+ A
Sbjct: 999 EFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQA 1058
Query: 58 KWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTY 117
+ A+E+F+ + + N + YN ++ G++EK +V E ++R + P I+TY
Sbjct: 1059 GDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTY 1118
Query: 118 NLWISSCAATLNIDQVKKFLDEMSCDSGGSDD-WVKYVNLVNIYITASHLVNAESSTLVE 176
N+ I E C +G +D W + NL +L
Sbjct: 1119 NIMI-----------------EGMCKAGKVEDGWDLFCNL----------------SLKG 1145
Query: 177 AEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGH 236
+ + + Y+ +I + G+K++ D ++K ++ S Y ++ + L G
Sbjct: 1146 VKPDV-----VAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGD 1200
Query: 237 LKEVGEIIDQWKQSA 251
+ E+I + +
Sbjct: 1201 REASAELIKEMRSCG 1215
Score = 44.7 bits (104), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 38/78 (48%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+Y L++ + AK E +LF + Q L N + YN ++ + G V+K ++
Sbjct: 435 SYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 494
Query: 106 KRKNVVPDIFTYNLWISS 123
+ PDI+TYN+ +
Sbjct: 495 DFFGISPDIWTYNILLGG 512
Score = 40.4 bits (93), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 43/214 (20%), Positives = 95/214 (44%), Gaps = 16/214 (7%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY++L++ + ++A+++FE + + + + YN ++ + +VE+ V E+
Sbjct: 977 TYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREM 1036
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
++ +V + TYN+ I + D ++ EM D G + + Y L++
Sbjct: 1037 SQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSD-GVPPNIMTYNTLLDGLCKNGK 1095
Query: 166 LVNAESSTLV--EAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK-----SLRMTKQK 218
L E + +V ++S + TY+ +I G+ K++ W SL+ K
Sbjct: 1096 L---EKAMVVFEYLQRSKMEPTIYTYNIMI---EGMCKAGKVEDGWDLFCNLSLKGVKPD 1149
Query: 219 MTSRNYICILSSYLMLGHLKEVGEIIDQWKQSAT 252
+ + N ++S + G +E + + K+ T
Sbjct: 1150 VVAYNT--MISGFCRKGSKEEADALFKEMKEDGT 1181
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 92/236 (38%), Gaps = 15/236 (6%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y A++ K A + F+ +++ + N + Y ++ + + A ++ ++
Sbjct: 296 YNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMI 355
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE---MSCDSGGSDDWVKYVNLVNIYITA 163
+K + P++ TY+ + + + + K+ +E MS D D V Y +L+N
Sbjct: 356 KKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP----DIVTYSSLINGLCLH 411
Query: 164 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 223
+ A + K ++Y+ LI G +++ K R Q+ N
Sbjct: 412 DRIDEANQMFDLMVSKGCLA-DVVSYNTLI---NGFCKAKRVEDGMKLFREMSQRGLVSN 467
Query: 224 ---YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
Y ++ + G + + E Q S DI N LLG D G EKA
Sbjct: 468 TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISP-DIWTYNILLGGLCDNGELEKA 522
>gi|255660924|gb|ACU25631.1| pentatricopeptide repeat-containing protein [Lampayo castellani]
Length = 484
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 104/257 (40%), Gaps = 12/257 (4%)
Query: 30 GERYFEGLPLSA---KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMM 86
+RYF + LS T T+ ++ + + E A FE +K +S + + YN M+
Sbjct: 134 AKRYFNKM-LSXGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVITYNTMI 192
Query: 87 TLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGG 146
Y V ++E+ E+K KN+ P + TY I + +D + ++EM G
Sbjct: 193 NGYYRVKKMEEAEKYFVEMKGKNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMK-GYGI 251
Query: 147 SDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKID 206
+ + Y L+ A + A S +K I + LI GN D
Sbjct: 252 KPNAITYSTLLPGLCNAEKMSEARSILKEMVDKYIAPTDNSIFMRLISSQCKAGNLDAAA 311
Query: 207 QIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQW-------KQSATSDFDISA 259
+ KS+ + +Y ++ +Y G + +++D+ + +T + SA
Sbjct: 312 DVLKSMIRLSVPTEAGHYGVLIENYCKAGQYDQAVKLLDKLIEKDIIVRPQSTLHMEPSA 371
Query: 260 CNRLLGAFSDVGLTEKA 276
N ++ + G T KA
Sbjct: 372 YNPIVEYLCNNGQTSKA 388
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 112/273 (41%), Gaps = 13/273 (4%)
Query: 27 IHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNE 84
+ + R+FE + + + TY +++ Y K E+AE+ F +K N+ + Y
Sbjct: 166 VETANRFFEDMKSREISPDVITYNTMINGYYRVKKMEEAEKYFVEMKGKNIEPTVVTYTT 225
Query: 85 MMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS 144
++ Y+SV QV+ +VEE+K + P+ TY+ + + + + L EM
Sbjct: 226 LIKGYVSVDQVDDALRLVEEMKGYGIKPNAITYSTLLPGLCNAEKMSEARSILKEMVDKY 285
Query: 145 GGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDK 204
D ++ L++ A +L +A + L + + Y LI Y G D+
Sbjct: 286 IAPTDNSIFMRLISSQCKAGNL-DAAADVLKSMIRLSVPTEAGHYGVLIENYCKAGQYDQ 344
Query: 205 ----IDQ-IWKSLRMTKQK---MTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFD 256
+D+ I K + + Q M Y I+ G + ++ Q + D
Sbjct: 345 AVKLLDKLIEKDIIVRPQSTLHMEPSAYNPIVEYLCNNGQTSKAEALVRQLMKLGVQ--D 402
Query: 257 ISACNRLLGAFSDVGLTEKANEFHMLLLQKNCA 289
+A N L+ S G + A E ++L++
Sbjct: 403 PTALNTLIRGHSQEGSPDSAFELLKIMLRRKVG 435
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 89/208 (42%), Gaps = 11/208 (5%)
Query: 42 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 101
+T ++Y AL + A+ F ++ + +N M+ + G+VE
Sbjct: 113 RTIKSYDALFKVIMRRGRFMMAKRYFNKMLSXGIEPTRHTFNVMIWGFFLSGKVETANRF 172
Query: 102 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 161
E++K + + PD+ TYN I+ +++ +K+ EM + V Y L+ Y+
Sbjct: 173 FEDMKSREISPDVITYNTMINGYYRVKKMEEAEKYFVEMKGKN-IEPTVVTYTTLIKGYV 231
Query: 162 TASHLVNAESSTLVEAEKSI-TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 220
+ + +A LVE K + ITY L+ GL N +K+ + L+ K
Sbjct: 232 SVDQVDDA--LRLVEEMKGYGIKPNAITYSTLL---PGLCNAEKMSEARSILKEMVDKYI 286
Query: 221 SRN----YICILSSYLMLGHLKEVGEII 244
+ ++ ++SS G+L +++
Sbjct: 287 APTDNSIFMRLISSQCKAGNLDAAADVL 314
>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
Length = 801
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 86/194 (44%), Gaps = 8/194 (4%)
Query: 55 AGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDI 114
G +KA +L + + + + Y++++T +VEK L+ +E+K V PD+
Sbjct: 264 CGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDV 323
Query: 115 FTYNLWISS-CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES-- 171
+TY + I S C A L I+Q + +EM G S V Y L++ Y+ A + A
Sbjct: 324 YTYTILIDSFCKAGL-IEQAQWLFEEMR-SVGCSPTVVTYTALIHAYLKAKQVPQANDIF 381
Query: 172 STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSY 231
+V+A + +TY L+ GN K +++ L T S Y +
Sbjct: 382 HRMVDAG---CRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRH 438
Query: 232 LMLGHLKEVGEIID 245
+ ++ G ++D
Sbjct: 439 TLAPNVVTYGALVD 452
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 120/307 (39%), Gaps = 25/307 (8%)
Query: 4 HKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTE 61
K FV S Y+ I + + F+ + + T + TYT L+ + A E
Sbjct: 281 RKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIE 340
Query: 62 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 121
+A+ LFE ++ S + Y ++ Y+ QV + + + P+ TY +
Sbjct: 341 QAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALV 400
Query: 122 SSCAATLNIDQVKKFLDEM--SCDSGGSDDW-------------VKYVNLVNIYITASHL 166
NI + + ++ + DS SD + V Y LV+ + +H
Sbjct: 401 DGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVD-GLCKAHK 459
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM--TSRNY 224
V+ L S + I YD LI + G D +++ L+MTK + Y
Sbjct: 460 VDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVF--LQMTKCGYLPSVHTY 517
Query: 225 ICILSSYLMLGHLKEVGEIIDQW-KQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 283
++ G L +++ Q K S T ++ ++ +G +EKA + L+
Sbjct: 518 TSLIDRMFKDGRLDLAMKVLSQMLKDSCTP--NVVTYTAMIDGLCRIGESEKALKLLSLM 575
Query: 284 LQKNCAP 290
+K C+P
Sbjct: 576 EEKGCSP 582
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYTA++ +EKA +L +++ S N + Y ++ G+++ + ++
Sbjct: 551 TYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQM 610
Query: 106 KRKNVVPDIFTYNLWISS-CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 155
RK P+ TY + I+ CAA L +D+ + L EM W KY+
Sbjct: 611 SRKGCSPNYVTYRVLINHLCAAGL-LDKARLLLGEMK-----QTYWPKYLQ 655
Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 96/247 (38%), Gaps = 21/247 (8%)
Query: 63 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 122
AE+++ + +N N + VG+ +K +++E+ RK VPD TY+ I+
Sbjct: 237 AEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVIT 296
Query: 123 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI- 181
+++ EM G + D Y L++ + A + A+ L E +S+
Sbjct: 297 FLCHATKVEKAFLLFQEMK-MVGVTPDVYTYTILIDSFCKAGLIEQAQ--WLFEEMRSVG 353
Query: 182 TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVG 241
+TY LI Y + + I+ + + Y ++ G++ +
Sbjct: 354 CSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAF 413
Query: 242 EIIDQW---KQSATSDFDISACNR--------LLGAFSDVGLTE--KANEFHMLL---LQ 285
E+ + SA SDF +R GA D GL + K + H LL L
Sbjct: 414 EVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVD-GLCKAHKVDHAHELLDAMLS 472
Query: 286 KNCAPTN 292
C P +
Sbjct: 473 SGCEPNH 479
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 71/148 (47%), Gaps = 2/148 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYTAL+ Y A ++A L ++ + L+ N + Y ++ G+V+ ++ E+
Sbjct: 429 TYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEM 488
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K + P++ TYN I+ NI+Q K ++EM +G D + Y +++ Y
Sbjct: 489 SEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDL-AGFFPDTITYTTIMDAYCKMGE 547
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLI 193
+ A + +K + Q +T++ L+
Sbjct: 548 MAKAHELLRIMLDKGL-QPTIVTFNVLM 574
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/283 (19%), Positives = 104/283 (36%), Gaps = 44/283 (15%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY +++ +AE++ +K + + ++Y +++ + G V + +E+
Sbjct: 324 TYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEM 383
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
KRK +VPD TY I + + +K EM G D V Y L++ Y A
Sbjct: 384 KRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEM-LSKGLKPDEVTYTALIDGYCKAGE 442
Query: 166 LVNAESSTLVEAEKSIT----------------------------------QRQWITYDF 191
+ A S EK +T Q TY+
Sbjct: 443 MKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNA 502
Query: 192 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI----IDQW 247
LI +GN ++ ++ + + + + Y I+ +Y +G + + E+ +D+
Sbjct: 503 LINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKG 562
Query: 248 KQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
Q F++ L+ F G+ E +L K P
Sbjct: 563 LQPTIVTFNV-----LMNGFCMSGMLEDGERLIKWMLDKGIMP 600
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/280 (18%), Positives = 106/280 (37%), Gaps = 36/280 (12%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+Y+ ++ Y + K +L E +++ L N YN +++ G+V + V+ +
Sbjct: 289 SYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVM 348
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS------------------CDSGG- 146
K + + PD Y IS + N+ K DEM C +G
Sbjct: 349 KNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKV 408
Query: 147 ---------------SDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 191
D V Y L++ Y A + A S EK +T +TY
Sbjct: 409 VEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTP-NVVTYTA 467
Query: 192 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 251
L+ G D +++ + + Y +++ +G++++ +++++ +
Sbjct: 468 LVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAG 527
Query: 252 TSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 291
D ++ A+ +G KA+E ++L K PT
Sbjct: 528 FFP-DTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPT 566
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 104/245 (42%), Gaps = 3/245 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+Y +LHL ++A L +++ + + Y+ ++ Y V Q+ KV ++EE+
Sbjct: 254 SYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEEL 313
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+RK + P+ +TYN IS T + + ++ L M D+ V Y L++ + + +
Sbjct: 314 QRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVV-YTTLISGFGKSGN 372
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
V+ E E ++ ++TY +I G + +++ + K Y
Sbjct: 373 -VSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYT 431
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 285
++ Y G +KE + +Q + + ++ L+ G + ANE + +
Sbjct: 432 ALIDGYCKAGEMKEAFSLHNQMVEKGLTP-NVVTYTALVDGLCKCGEVDIANELLHEMSE 490
Query: 286 KNCAP 290
K P
Sbjct: 491 KGLQP 495
Score = 40.8 bits (94), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 43/233 (18%), Positives = 98/233 (42%), Gaps = 13/233 (5%)
Query: 63 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 122
A +F + + +N + YN ++ L +G+V++ ++ +++ + VPD+ +Y++ +
Sbjct: 236 AFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVD 295
Query: 123 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT 182
+ +V K ++E+ G + Y ++++ +V AE V + I
Sbjct: 296 GYCQVEQLGKVLKLMEELQ-RKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIF 354
Query: 183 QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 242
+ Y LI +G G + +K K+K +++ S M+ L + G+
Sbjct: 355 PDN-VVYTTLI---SGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTS---MIHGLCQAGK 407
Query: 243 IIDQWK-----QSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
+++ K S D L+ + G ++A H +++K P
Sbjct: 408 VVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTP 460
>gi|297847016|ref|XP_002891389.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297337231|gb|EFH67648.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 371
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 100/225 (44%), Gaps = 21/225 (9%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 60
M + F + DYA R++L+ V G+ E++FE +P + + Y LL Y ++ T
Sbjct: 109 MCEQRVFNVFPEDYAARLNLVETVLGLEEAEKFFERIPENMRDYSVYENLLRSYTKSEKT 168
Query: 61 -EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNL 119
+KAE+ FE+++ ++ M++LY + + + V + E+ NV D L
Sbjct: 169 LDKAEDTFEKMRDLGFLSKPSPFDTMISLYRKLNKRDMVKKLKYEMMENNVKID-RPIEL 227
Query: 120 WISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK 179
+ S + D + ++ + DD + I S+L+ + V+ +
Sbjct: 228 NVLSIVSDFKRDYLDPLWNKYKKEGKLMDDEYR--------IRISYLLKLDD---VQGAE 276
Query: 180 SITQRQWITYDFLIILYAGL--------GNKDKIDQIWKSLRMTK 216
I Q+ T L + GL GN+ K++++ S+RM +
Sbjct: 277 KIYQKWQPTGPKLDMSVPGLLISRFRAEGNESKVEEMVNSIRMKR 321
>gi|255661202|gb|ACU25770.1| pentatricopeptide repeat-containing protein [Tamonea boxiana]
Length = 426
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 62/125 (49%), Gaps = 1/125 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+Y LL +Y A+ +A LF +++ N+ N + YN MM +Y + EK +++E+
Sbjct: 186 SYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMVIYGKTLEHEKANNLIQEM 245
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ + + P+ TY+ IS +D+ ++ C SG D V Y ++ Y A
Sbjct: 246 QDRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRC-SGIEIDQVLYQTMIVAYERAGL 304
Query: 166 LVNAE 170
+ +A+
Sbjct: 305 VAHAK 309
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 48/249 (19%), Positives = 103/249 (41%), Gaps = 11/249 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY+ L+ + + A +++++ + + ++Y+ ++ L + + + +
Sbjct: 11 TYSTLITHFGKEGLFDDALSWLQKMEEDRVPGDLVLYSNLIELSRKLCDYSRAISIFSRL 70
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
KR + PD+ YN I+ + + + EM +G D V Y L+ +Y+
Sbjct: 71 KRSGIAPDLVAYNSMINVFGKAKLFREARALVSEMRT-AGVMPDTVSYCTLLTMYVENQK 129
Query: 166 LVNAES--STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 223
+ A S S + E + S T + +I +Y LG + D+++ S+R + +
Sbjct: 130 FLEALSLFSEMREIQCSF---DLTTCNIMIDVYGQLGMAKEADKLFWSMRKMGIEPNVVS 186
Query: 224 YICILSSYLMLGHLKEVGEIIDQWK--QSATSDFDISACNRLLGAFSDVGLTEKANEFHM 281
Y +L Y G + GE I ++ Q + ++ N ++ + EKAN
Sbjct: 187 YNTLLRVY---GDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMVIYGKTLEHEKANNLIQ 243
Query: 282 LLLQKNCAP 290
+ + P
Sbjct: 244 EMQDRGIEP 252
>gi|225450007|ref|XP_002272339.1| PREDICTED: pentatricopeptide repeat-containing protein At2g19280
[Vitis vinifera]
Length = 644
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 78/192 (40%), Gaps = 35/192 (18%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT L+ E AE LF+R+ L + + YN +M Y G ++K ++ +
Sbjct: 395 TYTLLIDSCCKPGNMEMAEYLFQRMITEGLVPDVVSYNTLMNGYGKKGHLQKAFELLSMM 454
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY----- 160
+ V PD+ TYN+ I +++ K LDE++ G S D V + N++ +
Sbjct: 455 RSAGVSPDLVTYNILIHGLIKRGLVNEAKDILDELT-RRGFSPDVVTFTNIIGGFSNKGN 513
Query: 161 --------------------ITASHLVNAESSTLVEAEKSI---------TQRQWITYDF 191
+T S L+N T AE ++ + I Y+
Sbjct: 514 FEEAFLLFFYMSEHHLEPDVVTCSALLNGYCRTRCMAEANVLFHKMLDAGLKADVILYNS 573
Query: 192 LIILYAGLGNKD 203
LI + LGN D
Sbjct: 574 LIHGFCSLGNID 585
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 99/221 (44%), Gaps = 15/221 (6%)
Query: 62 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 121
K+EE + ++ NLS N ++N ++ + G + K A V +++ ++PD F+Y +
Sbjct: 306 KSEEAMDVLEVFNLSPNIFVFNSFISKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYTTMM 365
Query: 122 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI 181
+ +I K+L +M G Y L++ ++ AE ++ I
Sbjct: 366 AGYCKVKDISNALKYLGKM-LKRGIRPSVATYTLLIDSCCKPGNMEMAEYLF----QRMI 420
Query: 182 TQ---RQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN---YICILSSYLMLG 235
T+ ++Y+ L+ G G K + + ++ L M + S + Y ++ + G
Sbjct: 421 TEGLVPDVVSYNTLM---NGYGKKGHLQKAFELLSMMRSAGVSPDLVTYNILIHGLIKRG 477
Query: 236 HLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
+ E +I+D+ + S D+ ++G FS+ G E+A
Sbjct: 478 LVNEAKDILDELTRRGFSP-DVVTFTNIIGGFSNKGNFEEA 517
>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Cucumis sativus]
Length = 749
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 124/284 (43%), Gaps = 20/284 (7%)
Query: 15 ATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEK-AEELFERVKQS 73
R++L+ K I + + + +P +Y A+L K + K AE +F+ + +S
Sbjct: 142 CARVNLINKALSIVNLAKSYGFMP----GVLSYNAILDAVIRTKQSVKIAEGIFKEMVES 197
Query: 74 NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQV 133
+S N YN ++ + + G +E E++R +P++ TYN I + I +
Sbjct: 198 GVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEA 257
Query: 134 KKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQW----ITY 189
K L M+ G + + + Y ++N + E+S ++E +++R++ +T+
Sbjct: 258 FKLLRLMAL-KGLNPNLISYNVVINGLCREGQM--KETSEILE---EMSKRRYVPDRVTF 311
Query: 190 DFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR--NYICILSSYLMLGHLKEVGEIIDQW 247
+ LI Y +GN + + M K ++ Y +++S G+L E +DQ
Sbjct: 312 NTLINGYCNVGNFHQ--ALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQM 369
Query: 248 KQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 291
+ + L+ FS G ++A + +++ PT
Sbjct: 370 RDRGLHP-NGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPT 412
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 106/249 (42%), Gaps = 3/249 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY ++ Y + +A +L + L+ N + YN ++ GQ+++ + ++EE+
Sbjct: 240 TYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEM 299
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
++ VPD T+N I+ N Q EM +G S + V Y L+N A +
Sbjct: 300 SKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEM-VKNGLSPNVVTYTTLINSMCKAGN 358
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
L N L + TY LI ++ G + QI K + T Y
Sbjct: 359 L-NRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYN 417
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 285
+++ + +LG +++ ++ + + D+ + + ++ F EKA + + ++
Sbjct: 418 ALINGHCILGRMEDASGLLQEMIERGFIP-DVVSYSTIISGFCRNQELEKAFQLKVEMVA 476
Query: 286 KNCAPTNAS 294
K +P A+
Sbjct: 477 KGISPDVAT 485
Score = 37.7 bits (86), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 52/264 (19%), Positives = 104/264 (39%), Gaps = 26/264 (9%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY AL++ + E A L + + + + + Y+ +++ + ++EK + E+
Sbjct: 415 TYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEM 474
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K + PD+ TY+ I + +V EM G D V Y +L+N Y
Sbjct: 475 VAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEM-LSLGLPPDEVTYTSLINAYCIEGD 533
Query: 166 LVNAESSTLVEAEKSITQRQW----ITYDFLI--------------ILYAGLGNKDKIDQ 207
L A + + Q+ + +TY+ LI +L L + ++
Sbjct: 534 LDKA-----LRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNE 588
Query: 208 I-WKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGA 266
I + +L + ++ + ++ + M G + E +++ Q + N ++
Sbjct: 589 ITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYK-LNEEVYNVIIHG 647
Query: 267 FSDVGLTEKANEFHMLLLQKNCAP 290
S VG EKA + +L AP
Sbjct: 648 HSKVGNIEKAYNLYKEMLHSGFAP 671
>gi|414869157|tpg|DAA47714.1| TPA: hypothetical protein ZEAMMB73_516901 [Zea mays]
Length = 853
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 74/159 (46%), Gaps = 3/159 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L+ ++A A + + A +L+ R+++ LS + Y+ M+ GQ+ + E+
Sbjct: 432 TYCTLIDIHAKAGYLDIAMDLYGRMQEVGLSPDTFTYSVMVNCLGKGGQLAAAYKLFCEM 491
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
P++ TYN+ I+ A N + V K +M +G D + Y ++ + H
Sbjct: 492 IENGCTPNLVTYNIMIALQAKARNYENVVKLYKDMQV-AGFRPDKITYSIVMEVLGHCGH 550
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDK 204
L AE + +E + + + Y L+ L+ GN DK
Sbjct: 551 LDEAE-AVFIEMRRDWAPDEPV-YGLLVDLWGKAGNVDK 587
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/247 (20%), Positives = 96/247 (38%), Gaps = 4/247 (1%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
TYT ++ + A+ +EL + + +++ + YN ++ Y +++ V E
Sbjct: 360 GHTYTTMIGILGQARQFGVLKELLDEMSRAHCKPTVVTYNRIIHAYGRANYLKEAVKVFE 419
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
E++ PD TY I A +D M + G S D Y +VN
Sbjct: 420 EMQEAGYEPDRVTYCTLIDIHAKAGYLDIAMDLYGRMQ-EVGLSPDTFTYSVMVNCLGKG 478
Query: 164 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 223
L A E T +TY+ +I L A N + + +++K +++ +
Sbjct: 479 GQLAAAYKLFCEMIENGCTP-NLVTYNIMIALQAKARNYENVVKLYKDMQVAGFRPDKIT 537
Query: 224 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 283
Y ++ GHL E + + ++ D + L+ + G +KA ++ +
Sbjct: 538 YSIVMEVLGHCGHLDEAEAVFIEMRRDWAPDEPVYGL--LVDLWGKAGNVDKALGWYQAM 595
Query: 284 LQKNCAP 290
LQ P
Sbjct: 596 LQDGLQP 602
Score = 44.3 bits (103), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 45/232 (19%), Positives = 102/232 (43%), Gaps = 24/232 (10%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY ++H Y A + ++A ++FE ++++ + + Y ++ ++ G ++ + +
Sbjct: 397 TYNRIIHAYGRANYLKEAVKVFEEMQEAGYEPDRVTYCTLIDIHAKAGYLDIAMDLYGRM 456
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ + PD FTY++ ++ + K EM ++G + + V Y ++ + A +
Sbjct: 457 QEVGLSPDTFTYSVMVNCLGKGGQLAAAYKLFCEM-IENGCTPNLVTYNIMIALQAKARN 515
Query: 166 LVNAESSTLVEAEKSIT----QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 221
N +V+ K + + ITY ++ + G+ D+ + ++ +R
Sbjct: 516 YEN-----VVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMR-------- 562
Query: 222 RNYICILSSYLMLGHLKEVGEIIDQ---WKQSATSD---FDISACNRLLGAF 267
R++ Y +L L +D+ W Q+ D ++ CN LL AF
Sbjct: 563 RDWAPDEPVYGLLVDLWGKAGNVDKALGWYQAMLQDGLQPNVPTCNSLLSAF 614
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 19/84 (22%), Positives = 41/84 (48%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
A Y L+ L+ A +KA ++ + Q L N N +++ ++ + + + +
Sbjct: 566 APDEPVYGLLVDLWGKAGNVDKALGWYQAMLQDGLQPNVPTCNSLLSAFLKMNRFQDAYI 625
Query: 101 VVEEIKRKNVVPDIFTYNLWISSC 124
V++ + + +VP + TY L +S C
Sbjct: 626 VLQNMLARGLVPSVQTYTLLLSCC 649
>gi|356560499|ref|XP_003548529.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Glycine max]
Length = 836
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 82/180 (45%), Gaps = 12/180 (6%)
Query: 17 RIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLS 76
RI +T+ F + + LP T TY++L+H ++A+E+FE ++ L
Sbjct: 653 RIGNVTEAFKLRDAMKSRGILP----TCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLL 708
Query: 77 FNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKF 136
N Y ++ + +GQ++ V ++ E+ + P+ TY + I N+ + ++
Sbjct: 709 PNVFCYTALIGGHCKLGQMDIVGSILLEMSSNGIRPNKITYTIMIDGYCKLGNMKEAREL 768
Query: 137 LDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS---ITQRQWITYDFLI 193
L+EM +G + D V Y L Y L + TL KS + + ITY+ LI
Sbjct: 769 LNEM-IRNGIAPDTVTYNALQKGYCKEREL----TVTLQSDHKSNIGLPLEEEITYNTLI 823
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 70/156 (44%), Gaps = 2/156 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY LL Y A E A + F+ + + ++++YN ++ Y +G V + + + +
Sbjct: 608 TYALLLEGYCKADRIEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTEAFKLRDAM 667
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K + ++P TY+ I +D+ K+ +EM + G + Y L+ +
Sbjct: 668 KSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMR-NEGLLPNVFCYTALIGGHCKLGQ 726
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 201
+ + S L+E + + ITY +I Y LGN
Sbjct: 727 M-DIVGSILLEMSSNGIRPNKITYTIMIDGYCKLGN 761
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 93/215 (43%), Gaps = 10/215 (4%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQ---SNLSFNALMYNEMMTLYMSVGQVEK 97
A + T ALLH G EE+FE +KQ L + + YN ++ G++E+
Sbjct: 498 AANTVTSNALLH---GLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEE 554
Query: 98 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 157
+ EE+ ++ PD +TYN + A ID V + L E + G + Y L+
Sbjct: 555 AFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAK-EYGFVPNVYTYALLL 613
Query: 158 NIYITASHLVNA-ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 216
Y A + +A + ++ EK + + Y+ LI Y +GN + ++ +++
Sbjct: 614 EGYCKADRIEDAVKFFKNLDYEK--VELSSVVYNILIAAYCRIGNVTEAFKLRDAMKSRG 671
Query: 217 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 251
T Y ++ +G + E EI ++ +
Sbjct: 672 ILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNEG 706
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 34/166 (20%), Positives = 71/166 (42%), Gaps = 3/166 (1%)
Query: 7 FVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAK--TSETYTALLHLYAGAKWTEKAE 64
FV + YA ++ K I ++F+ L +S Y L+ Y +A
Sbjct: 602 FVPNVYTYALLLEGYCKADRIEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTEAF 661
Query: 65 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 124
+L + +K + Y+ ++ +G+V++ + EE++ + ++P++F Y I
Sbjct: 662 KLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCYTALIGGH 721
Query: 125 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAE 170
+D V L EMS +G + + Y +++ Y ++ A
Sbjct: 722 CKLGQMDIVGSILLEMS-SNGIRPNKITYTIMIDGYCKLGNMKEAR 766
>gi|293335157|ref|NP_001169529.1| uncharacterized protein LOC100383403 [Zea mays]
gi|224029903|gb|ACN34027.1| unknown [Zea mays]
gi|414887232|tpg|DAA63246.1| TPA: hypothetical protein ZEAMMB73_160132 [Zea mays]
Length = 819
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 101/231 (43%), Gaps = 3/231 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+YT+LL+ Y + EKA E+F ++++ N + YN ++ Y S G +++ ++ E+
Sbjct: 402 SYTSLLNAYGRSAQPEKAREVFNEMRKNACKPNKVSYNALIDAYGSAGMLKEAISLLHEM 461
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
++ + PD+ + + +++C + ++ L G + V Y + + Y++
Sbjct: 462 EQDGIQPDVISISTLLTACGRCKQLTKIDIILAAAK-SRGIQLNTVAYNSGIGSYLSLGD 520
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
A + +TY+ LI LG + + ++ + +T Y
Sbjct: 521 YKKA-LVLYTSMRAGNVKPDAVTYNILISGSCKLGRYVESLKFFEDMLDLNIHLTKEVYS 579
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
++ SY+ G L E + K++ D+ L+ A+SD G +A
Sbjct: 580 SVICSYVKQGKLTEAASTFNSMKETGCFP-DVLTYTTLIKAYSDDGSWRRA 629
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 79/194 (40%), Gaps = 2/194 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+Y ALL YA +A E F+ +KQ+ L + + Y ++ Y Q EK V E+
Sbjct: 367 SYNALLGAYASHGMHTEALETFKLLKQNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNEM 426
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
++ P+ +YN I + + + + L EM D G D + L+
Sbjct: 427 RKNACKPNKVSYNALIDAYGSAGMLKEAISLLHEMEQD-GIQPDVISISTLLTACGRCKQ 485
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
L + L A+ Q + Y+ I Y LG+ K ++ S+R K + Y
Sbjct: 486 LTKID-IILAAAKSRGIQLNTVAYNSGIGSYLSLGDYKKALVLYTSMRAGNVKPDAVTYN 544
Query: 226 CILSSYLMLGHLKE 239
++S LG E
Sbjct: 545 ILISGSCKLGRYVE 558
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 88/194 (45%), Gaps = 2/194 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT++++ Y+ E + +F+ + + N + YN ++ Y S G + + +
Sbjct: 332 TYTSIMYSYSVCGQAENCKAVFDIMVAEGVRPNIVSYNALLGAYASHGMHTEALETFKLL 391
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K+ + PDI +Y +++ + ++ ++ +EM ++ + V Y L++ Y +A
Sbjct: 392 KQNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNEMRKNACKPNK-VSYNALIDAYGSAGM 450
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
L A S L E E+ Q I+ L+ KID I + + ++ + Y
Sbjct: 451 LKEA-ISLLHEMEQDGIQPDVISISTLLTACGRCKQLTKIDIILAAAKSRGIQLNTVAYN 509
Query: 226 CILSSYLMLGHLKE 239
+ SYL LG K+
Sbjct: 510 SGIGSYLSLGDYKK 523
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 103/254 (40%), Gaps = 15/254 (5%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
++ Y ++ L+A ++A LF +++ N YN ++ + GQ +++
Sbjct: 153 NDIYGMMIRLHARHNKVDQARGLFFEMQEWRCKPNTDTYNSLIHAHARAGQWCWAINIMD 212
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
+++R + P TYN I++C A N + + +M+ + G D L+ I
Sbjct: 213 DMQRAAIPPSRTTYNNVINACGAAGNWKKALELCKKMTENGVGPD-------LITHNIVL 265
Query: 164 SHLVNAESSTLVEAEKSITQRQWI-----TYDFLIILYAGLGNKDKIDQIWKSLRMTKQK 218
S N + A I + + T + +I +G + +++ S+R +
Sbjct: 266 SAFKNGAQYSKAIAYFEIMKSSKVAPDTCTMNIVIHCLVKIGLYGEAIELFNSMRERRTT 325
Query: 219 MTSR--NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
Y I+ SY + G + + D +I + N LLGA++ G+ +A
Sbjct: 326 CHPDVVTYTSIMYSYSVCGQAENCKAVFDIMVAEGVRP-NIVSYNALLGAYASHGMHTEA 384
Query: 277 NEFHMLLLQKNCAP 290
E LL Q P
Sbjct: 385 LETFKLLKQNGLRP 398
Score = 44.3 bits (103), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 54/296 (18%), Positives = 114/296 (38%), Gaps = 20/296 (6%)
Query: 13 DYATRIDLMTKVFGIHSGER--------YFEGLPLSAKT-SETYTALLHLYAGAKWTEKA 63
+Y R D+ + +H+ +FE K ++TY +L+H +A A A
Sbjct: 148 NYCARNDIYGMMIRLHARHNKVDQARGLFFEMQEWRCKPNTDTYNSLIHAHARAGQWCWA 207
Query: 64 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 123
+ + ++++ + + YN ++ + G +K + +++ V PD+ T+N+ +S+
Sbjct: 208 INIMDDMQRAAIPPSRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLITHNIVLSA 267
Query: 124 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL-----VNIYITASHLVNAESSTLVEAE 178
+ + + M D + + + +Y A L N+ +
Sbjct: 268 FKNGAQYSKAIAYFEIMKSSKVAPDTCTMNIVIHCLVKIGLYGEAIELFNS-----MRER 322
Query: 179 KSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLK 238
++ +TY ++ Y+ G + ++ + + +Y +L +Y G
Sbjct: 323 RTTCHPDVVTYTSIMYSYSVCGQAENCKAVFDIMVAEGVRPNIVSYNALLGAYASHGMHT 382
Query: 239 EVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
E E KQ+ DI + LL A+ EKA E + + C P S
Sbjct: 383 EALETFKLLKQNGLRP-DIVSYTSLLNAYGRSAQPEKAREVFNEMRKNACKPNKVS 437
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 43/233 (18%), Positives = 105/233 (45%), Gaps = 5/233 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY +++ A +KA EL +++ ++ + + + +N +++ + + Q K E +
Sbjct: 225 TYNNVINACGAAGNWKKALELCKKMTENGVGPDLITHNIVLSAFKNGAQYSKAIAYFEIM 284
Query: 106 KRKNVVPDIFTYNLWISSCAATLNI--DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
K V PD T N+ I C + + + ++ F + D V Y +++ Y
Sbjct: 285 KSSKVAPDTCTMNIVIH-CLVKIGLYGEAIELFNSMRERRTTCHPDVVTYTSIMYSYSVC 343
Query: 164 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 223
N ++ + + + + ++Y+ L+ YA G + + +K L+ + +
Sbjct: 344 GQAENCKAVFDIMVAEGV-RPNIVSYNALLGAYASHGMHTEALETFKLLKQNGLRPDIVS 402
Query: 224 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
Y +L++Y ++ E+ ++ +++A +S N L+ A+ G+ ++A
Sbjct: 403 YTSLLNAYGRSAQPEKAREVFNEMRKNACKPNKVSY-NALIDAYGSAGMLKEA 454
>gi|147784915|emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
Length = 550
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 84/186 (45%), Gaps = 2/186 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
YT L+ E+ ++LF ++ + ++ N Y ++ + +G + + E++
Sbjct: 188 VYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKM 247
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K +VP+++TYN I C ++ + DEM + G + + V Y L+
Sbjct: 248 KLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMR-ERGVACNVVTYNTLIGGLCQERR 306
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
++ AE + ++ I+Y+ LI Y +GN DK ++ ++ + Q + Y
Sbjct: 307 VLEAE-RLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYN 365
Query: 226 CILSSY 231
+++ +
Sbjct: 366 ILIAGF 371
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 89/204 (43%), Gaps = 9/204 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L+ + +AE L R+K+ LS N + YN ++ Y S+G ++K + + ++
Sbjct: 293 TYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQM 352
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K P + TYN+ I+ + N V + EM G S V Y L++ + + +
Sbjct: 353 KSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEA-RGLSPSKVTYTILMDALVRSDN 411
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ A EK+ Y LI +G+ + +++KSL K Y
Sbjct: 412 IEKA-FQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYN 470
Query: 226 CIL-------SSYLMLGHLKEVGE 242
++ SSY L LKE+GE
Sbjct: 471 TMIYGYCKEGSSYRALRLLKEMGE 494
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 85/183 (46%), Gaps = 6/183 (3%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGL-PLSAKTSE-TYTALLHLYAGAKWTEKAEELFERVK 71
Y T ID K I G++ F + L ++ TYT L++ + + EL+E++K
Sbjct: 189 YTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMK 248
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
+ + N YN M+ + G++ + +E++ + V ++ TYN I +
Sbjct: 249 LTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVL 308
Query: 132 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWI-TYD 190
+ ++ + M D G S + + Y L++ Y + +L A S+L KS Q + TY+
Sbjct: 309 EAERLMCRMKRD-GLSPNLISYNTLIDGYCSIGNLDKA--SSLFNQMKSSGQSPSLATYN 365
Query: 191 FLI 193
LI
Sbjct: 366 ILI 368
>gi|125577145|gb|EAZ18367.1| hypothetical protein OsJ_33897 [Oryza sativa Japonica Group]
Length = 730
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 110/240 (45%), Gaps = 21/240 (8%)
Query: 51 LHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL---------- 100
++LY T++A LFE+++ +++ + +N M++ Y + K L
Sbjct: 283 MYLYLRKGETDEAMRLFEQMEDASI----ITWNAMISGYAQIMDSAKDDLQARSRGFQAL 338
Query: 101 -VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 159
+ ++KR + PD+FT++ +S C+A + ++Q ++ + + SG D V LVN+
Sbjct: 339 TIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQ-IHAQTIKSGFLSDVVVNSALVNM 397
Query: 160 YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 219
Y + +A + L + R ++T+ +I Y+ G + Q+++ +R+ +
Sbjct: 398 YNKCGCIQDANKAFL-----EMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRP 452
Query: 220 TSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 279
++ +LS+ G ++E D K+ + + ++ F +G E A F
Sbjct: 453 NEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSF 512
>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g61990, mitochondrial; Flags: Precursor
gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 974
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 64/126 (50%), Gaps = 1/126 (0%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
++TYT L++ + AEE+F ++ ++ + Y ++ + +G ++K + + +
Sbjct: 592 AKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFD 651
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
E+ + + P++ YN+ + + I++ K+ LDEMS G + V Y +++ Y +
Sbjct: 652 EMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSV-KGLHPNAVTYCTIIDGYCKS 710
Query: 164 SHLVNA 169
L A
Sbjct: 711 GDLAEA 716
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/268 (19%), Positives = 106/268 (39%), Gaps = 36/268 (13%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY ++ + + A + + + S N ++Y ++ ++ + V++E+
Sbjct: 419 TYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM 478
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K + + PDIF YN I + +D+ + FL EM ++G + Y ++ YI AS
Sbjct: 479 KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEM-VENGLKPNAFTYGAFISGYIEASE 537
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFL-------------------------------II 194
+A+ E + + + + +
Sbjct: 538 FASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTV 597
Query: 195 LYAGLGNKDKID---QIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 251
L GL DK+D +I++ +R +Y +++ + LG++++ I D+ +
Sbjct: 598 LMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG 657
Query: 252 TSDFDISACNRLLGAFSDVGLTEKANEF 279
+ ++ N LLG F G EKA E
Sbjct: 658 LTP-NVIIYNMLLGGFCRSGEIEKAKEL 684
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 114/289 (39%), Gaps = 42/289 (14%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y LL + + EKA+EL + + L NA+ Y ++ Y G + + + +E+K
Sbjct: 665 YNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMK 724
Query: 107 RKNVVPDIFTYNLWISSCA-----------------------ATLN--IDQVKKF----- 136
K +VPD F Y + C A N I+ V KF
Sbjct: 725 LKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTEL 784
Query: 137 -------LDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITY 189
L + S D G + V Y N++ Y+ + A + + + ITY
Sbjct: 785 KTEVLNRLMDGSFDRFGKPNDVTY-NIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITY 843
Query: 190 DFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ-WK 248
L+ Y +G + ++ ++ + Y I++++L G + ++DQ +
Sbjct: 844 TSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFA 903
Query: 249 QSATSD---FDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
++A D IS C LL F+ VG E A + +++ P +A+
Sbjct: 904 KNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSAT 952
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 53/268 (19%), Positives = 109/268 (40%), Gaps = 39/268 (14%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+Y L++ ++ +KA +F+ + + L+ N ++YN ++ + G++EK +++E+
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEM 688
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN------- 158
K + P+ TY I + ++ + + DEM D +V Y LV+
Sbjct: 689 SVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFV-YTTLVDGCCRLND 747
Query: 159 ----IYITASHLVNAESSTL--------------VEAEKSITQRQW------------IT 188
I I ++ SST E + + R +T
Sbjct: 748 VERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVT 807
Query: 189 YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK 248
Y+ +I GN + +++ ++ T Y +L+ Y +G E+ + D+
Sbjct: 808 YNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDE-A 866
Query: 249 QSATSDFDISACNRLLGAFSDVGLTEKA 276
+A + D + ++ AF G+T KA
Sbjct: 867 IAAGIEPDHIMYSVIINAFLKEGMTTKA 894
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 66/147 (44%), Gaps = 5/147 (3%)
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
EKA+ LF+ + S L A Y ++ Y V + ++ E+K++N+V +TY
Sbjct: 364 EKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTV 423
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
+ ++ ++D + EM SG + V Y L+ ++ S +A L E ++
Sbjct: 424 VKGMCSSGDLDGAYNIVKEMIA-SGCRPNVVIYTTLIKTFLQNSRFGDA-MRVLKEMKEQ 481
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQ 207
Y+ LII GL ++D+
Sbjct: 482 GIAPDIFCYNSLII---GLSKAKRMDE 505
Score = 37.7 bits (86), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 38/203 (18%), Positives = 81/203 (39%), Gaps = 2/203 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY A + Y A A++ + +++ + N ++ ++ Y G+V + +
Sbjct: 524 TYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSM 583
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ ++ D TY + ++ +D ++ EM G + D Y L+N + +
Sbjct: 584 VDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMR-GKGIAPDVFSYGVLINGFSKLGN 642
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ A S E+ +T I Y+ L+ + G +K ++ + + + Y
Sbjct: 643 MQKASSIFDEMVEEGLTP-NVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYC 701
Query: 226 CILSSYLMLGHLKEVGEIIDQWK 248
I+ Y G L E + D+ K
Sbjct: 702 TIIDGYCKSGDLAEAFRLFDEMK 724
>gi|356519757|ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [Glycine max]
Length = 871
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/275 (20%), Positives = 121/275 (44%), Gaps = 45/275 (16%)
Query: 56 GAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIF 115
G+ W + +F+ + SNL+FNA++ + VG+ ++ + + PD+
Sbjct: 229 GSVWKLFKDMIFKGPRPSNLTFNAMICGFCRQHRVVVGES-----LLHLMPKFMCSPDVV 283
Query: 116 TYNLWISSCA------------------------ATL-----------NIDQVKKFLDEM 140
T+N+ I++C AT N+ + +K D +
Sbjct: 284 TFNILINACCIGGRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGI 343
Query: 141 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI-TQRQWITYDFLIILYAGL 199
D G + + Y L++ Y A + A++S L E ++ +T++ L+ +
Sbjct: 344 Q-DMGIAPNAAIYNTLMDGYFKAREV--AQASLLYEEMRTTGVSPDCVTFNILVWGHYKY 400
Query: 200 GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISA 259
G + D++ K L ++ + S Y ++SS G L E +++ + + + + A
Sbjct: 401 GRIEDSDRLLKDLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLT-LSVVA 459
Query: 260 CNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
N L+GA+S GL +KA E + ++++ P++++
Sbjct: 460 FNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSST 494
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 42/76 (55%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+T +LH +A +LF+ ++ ++ NA +YN +M Y +V + +L+ EE+
Sbjct: 319 TFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLMDGYFKAREVAQASLLYEEM 378
Query: 106 KRKNVVPDIFTYNLWI 121
+ V PD T+N+ +
Sbjct: 379 RTTGVSPDCVTFNILV 394
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/100 (21%), Positives = 43/100 (43%)
Query: 42 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 101
+S T +LL W ++A L R+ + N + Y ++ Y + +E +
Sbjct: 490 PSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFL 549
Query: 102 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 141
+E+K + + PD + I + N+++ + EMS
Sbjct: 550 WKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMS 589
>gi|255574572|ref|XP_002528197.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532409|gb|EEF34204.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 642
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 107/249 (42%), Gaps = 5/249 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY+AL+ + + A LF+ +K++ L A +Y ++ +Y + +VEK V++E+
Sbjct: 236 TYSALISAFGKLGHYDSAIRLFDEMKENGLYPTAKIYTTLLGIYFKLDKVEKALDVIKEM 295
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K K +FTY WI +D + +M D G D V +L+NI
Sbjct: 296 KDKGCTLTVFTYTEWIKGLGKAGRVDDAYRVFLDMIKD-GCKPDVVLINSLINILGKVGR 354
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLI-ILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
L + E + +TY+ +I L+ + ++ ++ +S Y
Sbjct: 355 L-EVTLKLFRKMESWQCKPNVVTYNTVIKALFECKAPASEAASWFEKMKGCGIAPSSFTY 413
Query: 225 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 284
++ + +++ ++++ + + C+ L+ + V E ANE L L
Sbjct: 414 SILIDGFCKTNRIEKALLLLEEMDEKGFPPCPAAYCS-LINSLGKVKRYEAANEL-FLEL 471
Query: 285 QKNCAPTNA 293
++NC ++A
Sbjct: 472 KENCGHSSA 480
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 77/167 (46%), Gaps = 7/167 (4%)
Query: 35 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 94
+G P Y +L++ K E A ELF +K++ +A +Y M+ + G+
Sbjct: 439 KGFP---PCPAAYCSLINSLGKVKRYEAANELFLELKENCGHSSARVYAVMIKHFGKCGR 495
Query: 95 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 154
+ + + E+++ PD++ YN +S ID+ + L M ++G S D +
Sbjct: 496 LSEAVDLFNEMEKLGSKPDVYAYNALMSGMVRAGMIDEAQSLLRTMD-ENGCSPDLNSH- 553
Query: 155 NLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLI--ILYAGL 199
N++ + + + + + + SI + ++Y+ ++ + +AGL
Sbjct: 554 NIILNGLARTGVPDRAIEMFAKMKSSIIKPDAVSYNTVLGCLSHAGL 600
>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1043
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 91/204 (44%), Gaps = 6/204 (2%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSET--YTALLHLYAGAKWTEKAEELFERVK 71
Y++ ID + K + +FE T Y++L+ + ++A ELFE ++
Sbjct: 811 YSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQ 870
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
+ N + YN +++ G++ ++EE+++ VPD+ TYN+ I +D
Sbjct: 871 RRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVD 930
Query: 132 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA-EKSITQRQWITYD 190
+ + + M + G D + + +L+ L+ E+ L ++ E+ +TY+
Sbjct: 931 EAESYFKRMK-EKGIVPDVITFTSLIESLGKVDKLL--EACELFDSMEEEGYNPSVVTYN 987
Query: 191 FLIILYAGLGNKDKIDQIWKSLRM 214
LI + G + I+ +++
Sbjct: 988 VLIDILGRAGKVHEAAMIFHEMKV 1011
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 59/111 (53%), Gaps = 2/111 (1%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLP--LSAKTSETYTALLHLYAGAKWTEKAEELFERVK 71
+ ID + K I ++F G+ + TYT L++ A A E+A E+F +K
Sbjct: 325 FTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMK 384
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 122
++N S +A+ YN ++ G+ + + +E+K + +VP++ TYN+ IS
Sbjct: 385 ENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMIS 435
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 71/160 (44%), Gaps = 5/160 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY++L+ E+A FE + N +Y+ ++ + G V++ + EE+
Sbjct: 810 TYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEM 869
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+R+ P+I TYN +S A ++ +K L+EM G D V Y L++
Sbjct: 870 QRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEME-KVGCVPDLVTYNILIDGVGKMGM 928
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKI 205
+ AES EK I IT+ LI LG DK+
Sbjct: 929 VDEAESYFKRMKEKGIVP-DVITFTSLI---ESLGKVDKL 964
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 89/210 (42%), Gaps = 16/210 (7%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 102
++ Y +L L + A +F ++ Q + +A + + + G+++ A +
Sbjct: 251 STNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGRLDPAAEPI 310
Query: 103 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS---CDSGGSDDWVKYVNLVNI 159
+E+ + + P + T+ + I + + NID+ KF + M C S + V Y LVN
Sbjct: 311 QEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRC----SPNVVTYTTLVNG 366
Query: 160 YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 219
A L A VE +++ I Y+ LI GLG + D + +M
Sbjct: 367 LAKAGRLEEA-CEVFVEMKENNCSPDAIAYNTLI---DGLGKAGEADMACGLFK----EM 418
Query: 220 TSRNYICILSSY-LMLGHLKEVGEIIDQWK 248
R + L +Y +M+ L + G + W+
Sbjct: 419 KDRGLVPNLRTYNIMISVLGKAGRQPEAWQ 448
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 82/204 (40%), Gaps = 37/204 (18%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
Y L+ A + A LF+ +K L N YN M+++ G+ + + ++
Sbjct: 394 AYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDL 453
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSG-----------------GSD 148
K + VPD+FTYN I +D+V + EM G G+D
Sbjct: 454 KEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGAD 513
Query: 149 DWVKYVN-------------LVNIYITASHLVNAESSTLVEA-EKSITQRQWITYDFLII 194
V+Y + L++ +I H+ E+ L+E +K +TY L+
Sbjct: 514 RTVEYPSLGFKSLGEITYNTLMSAFIHNGHV--DEAVKLLEVMKKHECIPTVVTYTTLV- 570
Query: 195 LYAGLGNKDKIDQIWKSLR-MTKQ 217
GLG ++D+ LR M KQ
Sbjct: 571 --DGLGKAGRLDEAVSLLREMEKQ 592
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 99/251 (39%), Gaps = 17/251 (6%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+T L+ + ++A + F +K S N + Y ++ G++E+ V E+
Sbjct: 324 TFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEM 383
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K N PD YN I D EM D G + Y ++++ A
Sbjct: 384 KENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMK-DRGLVPNLRTYNIMISVLGKAGR 442
Query: 166 LVNAESSTLV-EAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
E+ L + ++ TY+ LI + G DK+ I K +M +
Sbjct: 443 --QPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIK-------EMVEKGG 493
Query: 225 ICILSSYLMLGHLKEVGEIIDQWKQSATSDF----DISACNRLLGAFSDVGLTEKANEFH 280
CI+S GH + E D+ + + F +I+ N L+ AF G ++A +
Sbjct: 494 ECIISRDSNAGHEGTI-EGADRTVEYPSLGFKSLGEITY-NTLMSAFIHNGHVDEAVKLL 551
Query: 281 MLLLQKNCAPT 291
++ + C PT
Sbjct: 552 EVMKKHECIPT 562
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 110/256 (42%), Gaps = 25/256 (9%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE-- 103
TY+ +++ + ++A ++F R+K+ + L+ N TL S+ + EK+ ++
Sbjct: 635 TYSLVINCLCKSDDVDQALDVFGRMKEEGME--PLLGN-YKTLLSSLVKDEKIDFALQIF 691
Query: 104 -EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 162
E++ ++VPD F YN+ ++ + +D+ K +D M K N++ T
Sbjct: 692 NELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSM-----------KNQNILPDLFT 740
Query: 163 ASHLVN--AESSTLVEAEKSITQRQWITYDFLIILYAG----LGNKDKIDQIWKSLRMTK 216
+ L++ +S L EA T+ ++ ++ Y LG K+ R
Sbjct: 741 YTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMA 800
Query: 217 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDF--DISACNRLLGAFSDVGLTE 274
+K + + S LG V E ++ S + ++ + L+ +F G+ +
Sbjct: 801 KKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVD 860
Query: 275 KANEFHMLLLQKNCAP 290
+A E + ++ C P
Sbjct: 861 RALELFEEMQRRQCPP 876
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 2/108 (1%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVK 71
Y ID + K+ + E YF+ + + T+T+L+ +A ELF+ ++
Sbjct: 916 YNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSME 975
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNL 119
+ + + + YN ++ + G+V + A++ E+K K +PD T +
Sbjct: 976 EEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGITIGI 1023
Score = 37.7 bits (86), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 44/95 (46%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT L+ A ++A L +++ + + Y+ +M + Q E+ + +E+
Sbjct: 565 TYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEM 624
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
RK V D+ TY+L I+ + ++DQ M
Sbjct: 625 VRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRM 659
>gi|115455297|ref|NP_001051249.1| Os03g0746400 [Oryza sativa Japonica Group]
gi|113549720|dbj|BAF13163.1| Os03g0746400, partial [Oryza sativa Japonica Group]
Length = 613
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 54/102 (52%), Gaps = 3/102 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT L+H A T +A + F+++K+ ++ +A YN ++ + G++E VVEE+
Sbjct: 401 TYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEM 460
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFL---DEMSCDS 144
+ + P++ T+N IS+ + K L +E SC+
Sbjct: 461 RTTGIAPNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNP 502
Score = 40.8 bits (94), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 31/155 (20%), Positives = 69/155 (44%), Gaps = 2/155 (1%)
Query: 18 IDLMTKVFGIHSGERYFEGLPLSAKTSE-TYTALLHLYAGAKWTEKAEELFERVKQSNLS 76
+D + K + F+ L + E ++ L+H + A+ ++A + E +KQ S
Sbjct: 302 LDTLCKERSVKRARGVFQELRGTIPPDENSFNTLVHGWCKARMLKEALDTMEEMKQHGFS 361
Query: 77 FNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKF 136
+ + Y ++ Y + V +++E++++ P++ TY + + + +
Sbjct: 362 PSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTILMHALGKAGRTREALDT 421
Query: 137 LDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES 171
D++ D G + D Y +L+ I A L +A S
Sbjct: 422 FDKLKED-GVAPDASFYNSLIYILGRAGRLEDAYS 455
>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
Length = 813
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 102/245 (41%), Gaps = 3/245 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY +++ A+ +KAE + ++ + + YN ++ Y S GQ ++ V +++
Sbjct: 253 TYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKM 312
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ ++PD+ T N ++S I + D M+ G D Y ++N Y T
Sbjct: 313 TSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAM-KGQKTDIFSYKIMLNGYATKGC 371
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
LV+ + I I ++ LI YA G D+ I+ +R + Y
Sbjct: 372 LVDLTELFNLMLSDGIAPDSHI-FNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYS 430
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 285
++++ +G + + E +Q + IS + L+ F G KA + + ++
Sbjct: 431 TVIAALCRIGKMDDAVEKFNQMIDQGVAP-SISTYHFLIQGFCTHGDLLKAKDLVLQMMN 489
Query: 286 KNCAP 290
K P
Sbjct: 490 KGMRP 494
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 103/238 (43%), Gaps = 15/238 (6%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSF--NALMYNEMMTLYMSVGQVEKVALVVE 103
+Y +L + + +A+EL + + NA+ YN ++ + G V K +
Sbjct: 181 SYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFN 240
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
E+ ++ + PD+ TYN +++ +D+ + L +M D+W Y +L+ Y +
Sbjct: 241 EMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWT-YNSLIYGYSST 299
Query: 164 SHLVNAESSTLVEAEKSITQRQWITYDFLII--LYAGLGNKDKID---QIWKSLRMTKQK 218
A V K +T Q I D + + L A L KI ++ S+ M QK
Sbjct: 300 GQWKEA-----VRVSKKMTS-QGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQK 353
Query: 219 MTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
+Y +L+ Y G L ++ E+ + + D N L+ A++ G+ ++A
Sbjct: 354 TDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAP-DSHIFNVLIKAYAKCGMLDRA 410
>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 64/126 (50%), Gaps = 1/126 (0%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
++TYT L++ + AEE+F ++ ++ + Y ++ + +G ++K + + +
Sbjct: 592 AKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFD 651
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
E+ + + P++ YN+ + + I++ K+ LDEMS G + V Y +++ Y +
Sbjct: 652 EMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSV-KGLHPNAVTYCTIIDGYCKS 710
Query: 164 SHLVNA 169
L A
Sbjct: 711 GDLAEA 716
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/268 (19%), Positives = 106/268 (39%), Gaps = 36/268 (13%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY ++ + + A + + + S N ++Y ++ ++ + V++E+
Sbjct: 419 TYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM 478
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K + + PDIF YN I + +D+ + FL EM ++G + Y ++ YI AS
Sbjct: 479 KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEM-VENGLKPNAFTYGAFISGYIEASE 537
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFL-------------------------------II 194
+A+ E + + + + +
Sbjct: 538 FASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTV 597
Query: 195 LYAGLGNKDKID---QIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 251
L GL DK+D +I++ +R +Y +++ + LG++++ I D+ +
Sbjct: 598 LMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG 657
Query: 252 TSDFDISACNRLLGAFSDVGLTEKANEF 279
+ ++ N LLG F G EKA E
Sbjct: 658 LTP-NVIIYNMLLGGFCRSGEIEKAKEL 684
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 114/289 (39%), Gaps = 42/289 (14%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y LL + + EKA+EL + + L NA+ Y ++ Y G + + + +E+K
Sbjct: 665 YNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMK 724
Query: 107 RKNVVPDIFTYNLWISSCA-----------------------ATLN--IDQVKKF----- 136
K +VPD F Y + C A N I+ V KF
Sbjct: 725 LKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTEL 784
Query: 137 -------LDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITY 189
L + S D G + V Y N++ Y+ + A + + + ITY
Sbjct: 785 KTEVLNRLMDGSFDRFGKPNDVTY-NIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITY 843
Query: 190 DFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ-WK 248
L+ Y +G + ++ ++ + Y I++++L G + ++DQ +
Sbjct: 844 TSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFA 903
Query: 249 QSATSD---FDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
++A D IS C LL F+ VG E A + +++ P +A+
Sbjct: 904 KNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSAT 952
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 53/268 (19%), Positives = 109/268 (40%), Gaps = 39/268 (14%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+Y L++ ++ +KA +F+ + + L+ N ++YN ++ + G++EK +++E+
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEM 688
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN------- 158
K + P+ TY I + ++ + + DEM D +V Y LV+
Sbjct: 689 SVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFV-YTTLVDGCCRLND 747
Query: 159 ----IYITASHLVNAESSTL--------------VEAEKSITQRQW------------IT 188
I I ++ SST E + + R +T
Sbjct: 748 VERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVT 807
Query: 189 YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK 248
Y+ +I GN + +++ ++ T Y +L+ Y +G E+ + D+
Sbjct: 808 YNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDE-A 866
Query: 249 QSATSDFDISACNRLLGAFSDVGLTEKA 276
+A + D + ++ AF G+T KA
Sbjct: 867 IAAGIEPDHIMYSVIINAFLKEGMTTKA 894
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 66/147 (44%), Gaps = 5/147 (3%)
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
EKA+ LF+ + S L A Y ++ Y V + ++ E+K++N+V +TY
Sbjct: 364 EKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTV 423
Query: 121 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 180
+ ++ ++D + EM SG + V Y L+ ++ S +A L E ++
Sbjct: 424 VKGMCSSGDLDGAYNIVKEMIA-SGCRPNVVIYTTLIKTFLQNSRFGDA-MRVLKEMKEQ 481
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQ 207
Y+ LII GL ++D+
Sbjct: 482 GIAPDIFCYNSLII---GLSKAKRMDE 505
Score = 37.4 bits (85), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 38/203 (18%), Positives = 81/203 (39%), Gaps = 2/203 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY A + Y A A++ + +++ + N ++ ++ Y G+V + +
Sbjct: 524 TYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSM 583
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ ++ D TY + ++ +D ++ EM G + D Y L+N + +
Sbjct: 584 VDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMR-GKGIAPDVFSYGVLINGFSKLGN 642
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ A S E+ +T I Y+ L+ + G +K ++ + + + Y
Sbjct: 643 MQKASSIFDEMVEEGLTP-NVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYC 701
Query: 226 CILSSYLMLGHLKEVGEIIDQWK 248
I+ Y G L E + D+ K
Sbjct: 702 TIIDGYCKSGDLAEAFRLFDEMK 724
>gi|414875533|tpg|DAA52664.1| TPA: hypothetical protein ZEAMMB73_493958 [Zea mays]
Length = 688
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 87/200 (43%), Gaps = 2/200 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY +LL+ Y A ++A LF ++++ L+ L YN + Y +G +E+ ++ EE+
Sbjct: 347 TYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEM 406
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ +P++ TY + + ++ ++F DEM G D Y + +
Sbjct: 407 GEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEM-LSKGLQPDCFAYNTRICAELILGD 465
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ A V + I+ +TY+ LI GN ++ + + Y
Sbjct: 466 IARALELREVLMLEGISS-DTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYT 524
Query: 226 CILSSYLMLGHLKEVGEIID 245
C++ ++ G L+E +I +
Sbjct: 525 CLIHAHCERGLLREARKIFN 544
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 48/100 (48%)
Query: 42 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 101
T TY A++H + E A+ F ++ L + + YN ++ Y G +++ L+
Sbjct: 308 PTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLL 367
Query: 102 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 141
+++R + P + TYN+ I ++++ + +EM
Sbjct: 368 FGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEMG 407
Score = 37.7 bits (86), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 1/110 (0%)
Query: 10 SDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSE-TYTALLHLYAGAKWTEKAEELFE 68
+D Y I +T+ + EG+ LS K S TY L+ +K +L
Sbjct: 240 NDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKASSFTYNPLITGLLARGCVKKVYDLQL 299
Query: 69 RVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYN 118
++ + + YN M+ + G VE + E++ ++PD+ TYN
Sbjct: 300 EMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYN 349
>gi|449511130|ref|XP_004163870.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 847
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/249 (18%), Positives = 109/249 (43%), Gaps = 6/249 (2%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
E + ++ Y+ A A ++ ++++ + N + N + + + +++K E
Sbjct: 281 PEAFGFVMVSYSRAGRLRDAMKVLTLMQKAGVEPNLSICNTAIHILVMGNELKKALRFAE 340
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
+ + P++ TYN I +DQ + +D+M G S D V Y ++ +
Sbjct: 341 RMVLIGIAPNVVTYNCLIKGYCNVHQVDQAMELIDQMP-SKGCSPDKVSYYTVMGLLCRD 399
Query: 164 SHLVNAESSTLVEAEKSITQ--RQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 221
L E L++ ++ ++ +TY+ LI + + G+ D+ +I + + K+
Sbjct: 400 KRL--NEIRELIKKMQTDSKLLPDHVTYNSLIQMLSKHGHGDEALEILQEAEKLRFKVDK 457
Query: 222 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 281
Y I+ +Y G +++ E++ + S D D+ +L F +G ++A +
Sbjct: 458 VEYSAIVHAYCKEGKIQKAKELVSEM-FSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQ 516
Query: 282 LLLQKNCAP 290
+ + +C P
Sbjct: 517 QMYKHHCKP 525
>gi|356536919|ref|XP_003536980.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
chloroplastic-like [Glycine max]
Length = 716
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 94/218 (43%), Gaps = 11/218 (5%)
Query: 41 AKTSETYTALLHLYAGAKW---TEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 97
A + TYT L+ Y A T + E R+ + + Y +++ + VG +++
Sbjct: 344 APNTRTYTTLMKGYMNAGRVSDTVRMLEAMRRLDDKGSQPDHVSYTTVVSALVKVGAMDR 403
Query: 98 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 157
V+ E+ R V ++ TYN+ + L ID+ ++ L EM D+G D V Y
Sbjct: 404 ARQVLAEMTRIGVPANLITYNVLLKGYCKQLQIDKARELLKEMVDDAGIQPDVVSY---- 459
Query: 158 NIYITASHLVNAESSTLV---EAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM 214
NI I LV+ + L E I+Y L+ +A G +++ +
Sbjct: 460 NILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFAYSGQPKLAHRVFNEMDS 519
Query: 215 TKQ-KMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 251
+ K+ + ++ Y LG ++E +++ + K+S
Sbjct: 520 DPRVKVDLIAWNMLVEGYCRLGLVEEAKKVVQKMKESG 557
>gi|302821741|ref|XP_002992532.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
gi|300139734|gb|EFJ06470.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
Length = 759
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 68/150 (45%), Gaps = 5/150 (3%)
Query: 14 YATRIDLMTKVFGI---HSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERV 70
Y T +D+ ++ HS R E AK TY ALL Y +A L E +
Sbjct: 333 YNTMVDIHARLGNFDEAHSIRRAMEEAGF-AKDIVTYNALLDSYGKQGKFREAMSLLEEM 391
Query: 71 KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 130
KQ S N L Y+ ++ Y G + +++K+ + PD+ Y+ + C +
Sbjct: 392 KQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSP 451
Query: 131 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
D+ L+EM+ D+G + + Y +L++ Y
Sbjct: 452 DEALALLEEMA-DNGIRPNVITYNSLLDAY 480
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 64/153 (41%), Gaps = 4/153 (2%)
Query: 11 DSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSE---TYTALLHLYAGAKWTEKAEELF 67
D Y T I + +H G E + S+ TY+ ++ YA +A LF
Sbjct: 259 DVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALF 318
Query: 68 ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAAT 127
+ ++ N+ + + YN M+ ++ +G ++ + ++ DI TYN + S
Sbjct: 319 QEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQ 378
Query: 128 LNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
+ L+EM G S + + Y L++ Y
Sbjct: 379 GKFREAMSLLEEMK-QRGASPNILTYSALIDAY 410
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 45/244 (18%), Positives = 100/244 (40%), Gaps = 3/244 (1%)
Query: 34 FEGLPLSAKTS-ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSV 92
FE + + K + Y A++ + A +F + + +S + + +N +++
Sbjct: 178 FEAMKVVCKPNLVVYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRA 237
Query: 93 GQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVK 152
+ E+ + E++ + + D TYN I++ + ++ M+ SG +
Sbjct: 238 NRWEECDRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVIT 297
Query: 153 YVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 212
Y +++ Y L + + E + I Y+ ++ ++A LGN D+ I +++
Sbjct: 298 YSTMIDGYAKLG-LAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAM 356
Query: 213 RMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGL 272
Y +L SY G +E ++++ KQ S +I + L+ A+ G
Sbjct: 357 EEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASP-NILTYSALIDAYCKHGF 415
Query: 273 TEKA 276
A
Sbjct: 416 HRDA 419
>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 74/171 (43%), Gaps = 5/171 (2%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 102
+S TY+ ++ + A+ LF R+K S LS YN +M +E+ +
Sbjct: 326 SSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLF 385
Query: 103 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 162
+E+K N PD ++N+ I +I K+ L++M G + D Y + +N
Sbjct: 386 QEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQ-QMGLTPDAYTYSSFINRLSK 444
Query: 163 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 213
+ A+ + IT + YD LI G G D+I+++ LR
Sbjct: 445 LGQMEEAKGAFDSMIASGITPDNHV-YDSLI---KGFGLNDEIEEVINLLR 491
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 47/243 (19%), Positives = 104/243 (42%), Gaps = 21/243 (8%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y+ L+ + ++ + LF+ + + +S N ++Y+ ++ + G + V+ +
Sbjct: 83 YSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKGLWREATAVLHTMT 142
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
+ + PD++TY I + D M+ + G V Y L+N +
Sbjct: 143 ERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMT-EKGEEPSTVTYNVLINGLCKEGCI 201
Query: 167 VNAES--STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
+A T++E K + + ++Y+ LI+ GL N K+D+ ++++ + NY
Sbjct: 202 GDAFKIFETMLEKGKRL---EVVSYNTLIM---GLCNNGKLDE---AMKLFSSLLEDGNY 252
Query: 225 I--------CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
+ ++ G L + EI D + + ++ C+ L+G + G+ +KA
Sbjct: 253 VEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFG-NLFTCHILIGEYIKSGIIDKA 311
Query: 277 NEF 279
E
Sbjct: 312 MEL 314
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 57/115 (49%), Gaps = 1/115 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+Y +++ K EKA +L ++ S+ N+ Y +M G+VE+ ++ E+
Sbjct: 12 SYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRLLGEM 71
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
KRK + D+ Y+ IS + +D+ K DEM + G S + V Y L+N +
Sbjct: 72 KRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEM-LEKGISPNVVVYSCLINGF 125
>gi|125548803|gb|EAY94625.1| hypothetical protein OsI_16402 [Oryza sativa Indica Group]
Length = 769
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 86/194 (44%), Gaps = 8/194 (4%)
Query: 55 AGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDI 114
G +KA +L + + + + Y++++T +VEK L+ +E+K V PD+
Sbjct: 433 CGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDV 492
Query: 115 FTYNLWISS-CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES-- 171
+TY + I S C A L I+Q + +EM G S V Y L++ Y+ A + A
Sbjct: 493 YTYTILIDSFCKAGL-IEQAQWLFEEMR-SVGCSPTVVTYTALIHAYLKAKQVPQANDIF 550
Query: 172 STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSY 231
+V+A + +TY L+ GN K +++ L T S Y +
Sbjct: 551 HRMVDAG---CRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRH 607
Query: 232 LMLGHLKEVGEIID 245
+ ++ G ++D
Sbjct: 608 TLAPNVVTYGALVD 621
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 120/307 (39%), Gaps = 25/307 (8%)
Query: 4 HKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTE 61
K FV S Y+ I + + F+ + + T + TYT L+ + A E
Sbjct: 450 RKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIE 509
Query: 62 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 121
+A+ LFE ++ S + Y ++ Y+ QV + + + P+ TY +
Sbjct: 510 QAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALV 569
Query: 122 SSCAATLNIDQVKKFLDEM--SCDSGGSDDW-------------VKYVNLVNIYITASHL 166
NI + + ++ + DS SD + V Y LV+ + +H
Sbjct: 570 DGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVD-GLCKAHK 628
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQK--MTSRNY 224
V+ L S + I YD LI + G D +++ L+MTK + Y
Sbjct: 629 VDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVF--LQMTKCGYLPSVHTY 686
Query: 225 ICILSSYLMLGHLKEVGEIIDQW-KQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 283
++ G L +++ Q K S T ++ ++ +G +EKA + L+
Sbjct: 687 TSLIDRMFKDGRLDLAMKVLSQMLKDSCTP--NVVTYTAMIDGLCRIGESEKALKLLSLM 744
Query: 284 LQKNCAP 290
+K C+P
Sbjct: 745 EEKGCSP 751
Score = 37.7 bits (86), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 96/247 (38%), Gaps = 21/247 (8%)
Query: 63 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 122
AE+++ + +N N + VG+ +K +++E+ RK VPD TY+ I+
Sbjct: 406 AEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVIT 465
Query: 123 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI- 181
+++ EM G + D Y L++ + A + A+ L E +S+
Sbjct: 466 FLCHATKVEKAFLLFQEMKM-VGVTPDVYTYTILIDSFCKAGLIEQAQ--WLFEEMRSVG 522
Query: 182 TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVG 241
+TY LI Y + + I+ + + Y ++ G++ +
Sbjct: 523 CSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAF 582
Query: 242 EIIDQW---KQSATSDFDISACNR--------LLGAFSDVGLTE--KANEFHMLL---LQ 285
E+ + SA SDF +R GA D GL + K + H LL L
Sbjct: 583 EVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVD-GLCKAHKVDHAHELLDAMLS 641
Query: 286 KNCAPTN 292
C P +
Sbjct: 642 SGCEPNH 648
>gi|18417671|ref|NP_567856.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635625|sp|O65567.2|PP342_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g30825, chloroplastic; Flags: Precursor
gi|332660415|gb|AEE85815.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 904
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 61/124 (49%), Gaps = 4/124 (3%)
Query: 34 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 93
F+G +S E Y LL Y K EK + +R+K+S + YN M+ +Y G
Sbjct: 761 FDGFSVSL---EAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQG 817
Query: 94 QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKY 153
+++VA V++E+K + PD+ +YN I + +++ + EM + D V Y
Sbjct: 818 WIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDK-VTY 876
Query: 154 VNLV 157
NLV
Sbjct: 877 TNLV 880
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/244 (18%), Positives = 100/244 (40%), Gaps = 4/244 (1%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
+ +L +Y +K + L+ R+++S + +N MYN ++ +++++ EE+
Sbjct: 632 FRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMI 691
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
R P+ T+N+ + +V + + G D + Y ++ Y
Sbjct: 692 RYGFTPNTVTFNVLLDVYGKAKLFKKVNELF--LLAKRHGVVDVISYNTIIAAYGKNKDY 749
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 226
N SS + + Y+ L+ Y +K I K ++ + Y
Sbjct: 750 TNM-SSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNI 808
Query: 227 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 286
+++ Y G + EV +++ + K+S D+ + N L+ A+ G+ E+A + +
Sbjct: 809 MINIYGEQGWIDEVADVLKELKESGLGP-DLCSYNTLIKAYGIGGMVEEAVGLVKEMRGR 867
Query: 287 NCAP 290
N P
Sbjct: 868 NIIP 871
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 60/149 (40%), Gaps = 35/149 (23%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSN----LSFNALM-------------------- 81
T+ LL +Y AK +K ELF K+ +S+N ++
Sbjct: 701 TFNVLLDVYGKAKLFKKVNELFLLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQ 760
Query: 82 ----------YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
YN ++ Y Q+EK +++ +K+ PD +TYN+ I+ ID
Sbjct: 761 FDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWID 820
Query: 132 QVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
+V L E+ +SG D Y L+ Y
Sbjct: 821 EVADVLKELK-ESGLGPDLCSYNTLIKAY 848
>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
Length = 700
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/249 (20%), Positives = 111/249 (44%), Gaps = 5/249 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY AL++ + KAE+L +++S + + +N ++ Y + GQ+EK V+ ++
Sbjct: 406 TYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDM 465
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
++K + D+ ++ + + I + LD+M + V Y ++++ YI +
Sbjct: 466 QQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQV-YNSIIDAYIESGD 524
Query: 166 LVNAESSTLVEAEK-SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
++ LVE K S +TY+ L+ D+ +++ +LR + +Y
Sbjct: 525 --TEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSY 582
Query: 225 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 284
I+S+ G + E++ + + + C+ L+ A + G + +L
Sbjct: 583 NTIISACCNKGDTDKALELLQEMNKYGIRP-TLRTCHTLVSALASAGRVHDMECLYQQML 641
Query: 285 QKNCAPTNA 293
KN P+++
Sbjct: 642 HKNVEPSSS 650
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 55/101 (54%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
A ++ Y +++ Y + TE+A L E++K S +S + + YN ++ Q+++
Sbjct: 506 APNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEE 565
Query: 101 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 141
++ ++ + + PD+ +YN IS+C + D+ + L EM+
Sbjct: 566 LIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMN 606
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 39/193 (20%), Positives = 87/193 (45%), Gaps = 4/193 (2%)
Query: 62 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 121
KA+++FE + + L ++YN ++ Y V + + E++K +++ PD TYN I
Sbjct: 352 KAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALI 411
Query: 122 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN-LVNIYITASHLVNAESSTLVEAEKS 180
+ + + + + EM + G D V+ N L++ Y TA L + L + ++
Sbjct: 412 NGLCKLEMVTKAEDLVMEM--EKSGVDPSVETFNTLIDAYGTAGQLEKC-FTVLSDMQQK 468
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 240
+ I++ ++ + G + I + ++ Y I+ +Y+ G ++
Sbjct: 469 GIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQA 528
Query: 241 GEIIDQWKQSATS 253
++++ K S S
Sbjct: 529 LLLVEKMKNSGVS 541
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 99/233 (42%), Gaps = 11/233 (4%)
Query: 63 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 122
A ++F+ + ++ N + YN M+ ++ G +E + +++ P++ TYN+ +S
Sbjct: 213 ALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLS 272
Query: 123 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA-EKSI 181
T +D+ + +DEM+ S D + + + T ES T++ +S+
Sbjct: 273 GLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRT------GESQTMLSLFAESL 326
Query: 182 TQRQWITYDFLIILYAGL---GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLK 238
+ + IL GL G K Q+++ L T T+ Y +++ Y + L+
Sbjct: 327 KKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLR 386
Query: 239 EVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 291
I +Q K I+ N L+ + + KA + M + + P+
Sbjct: 387 GAFCIFEQMKSRHIRPDHITY-NALINGLCKLEMVTKAEDLVMEMEKSGVDPS 438
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/196 (17%), Positives = 87/196 (44%), Gaps = 2/196 (1%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
ET+ L+ Y A EK + ++Q + + + + ++ + G++ + ++++
Sbjct: 440 ETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDD 499
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+ K+V P+ YN I + + + +Q +++M +SG S V Y L+ +S
Sbjct: 500 MIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMK-NSGVSASIVTYNLLLKGLCRSS 558
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
+ AE + + + ++Y+ +I G+ DK ++ + + + T R
Sbjct: 559 QIDEAEELIYTLRNQGL-RPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTC 617
Query: 225 ICILSSYLMLGHLKEV 240
++S+ G + ++
Sbjct: 618 HTLVSALASAGRVHDM 633
>gi|297805886|ref|XP_002870827.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316663|gb|EFH47086.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 582
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 106/231 (45%), Gaps = 20/231 (8%)
Query: 48 TALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKR 107
T LL+ + T+ ++F+++ + + N +YN ++ G EK ++ E++
Sbjct: 172 TVLLNSLVKERLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDSEKAEKLLSEMEE 231
Query: 108 KNVVPDIFTYNLWISS-CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
K V PDIFTYN IS C +++ + + D M SG + D V Y +L++ + +
Sbjct: 232 KGVFPDIFTYNTLISVYCKKSMHFEAL-SVQDRME-RSGVAPDIVTYNSLIHGFSREGRM 289
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN--- 223
E++ L K + +TY LI Y +++ I ++LR+ ++ M SR
Sbjct: 290 --REATRLFRKIKGVVMANHVTYTTLIDGYC------RMNDIDEALRL-REVMESRGFCP 340
Query: 224 ----YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDV 270
Y IL G ++E ++ + +I+ CN L+ A+ +
Sbjct: 341 GVVTYNSILRKLCEDGRIREANRLLTEMSVKKIEPDNIT-CNTLINAYCKI 390
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 38/74 (51%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
Y L+H + + +EKAE+L +++ + + YN ++++Y + V +
Sbjct: 204 HVYNVLVHACSKSGDSEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDR 263
Query: 105 IKRKNVVPDIFTYN 118
++R V PDI TYN
Sbjct: 264 MERSGVAPDIVTYN 277
>gi|147788269|emb|CAN69960.1| hypothetical protein VITISV_032887 [Vitis vinifera]
Length = 472
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 96/214 (44%), Gaps = 3/214 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT L+ K +A L E + ++ + +YN +M Y + + + V +++
Sbjct: 241 TYTILIDNVCNGKNLREATRLLEVLGEAGFKPDCYVYNTIMKGYCILDKGSEAIGVYKKM 300
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K + V PD+ TYN I + + + + +KFLD M+ + G D V Y +L+N +
Sbjct: 301 KEEGVEPDLVTYNTLIFGLSKSGRVKEARKFLDIMA-EMGHFPDAVTYTSLMNGLCREGN 359
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ A + L E E TY+ L+ L ++ +++ ++ K+ +Y
Sbjct: 360 ALGA-LALLEEMEAKGCSPNSCTYNTLLHGLCKLRMLERGIELYGVMKSGGMKLEKASYA 418
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISA 259
+ + G + E E D +S + D D++A
Sbjct: 419 TFVRALCKEGRVAEAYEAFDYVVESKSFD-DVTA 451
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 79/217 (36%), Gaps = 28/217 (12%)
Query: 91 SVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDW 150
S G+ E +V+E+ K+ PD FTYN I T + V F+DE+ D
Sbjct: 180 SAGREEHAIELVKELSLKHSPPDSFTYNFIIRHLCKTRALSTVYNFIDELQNSFQLKPDL 239
Query: 151 VKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK 210
V Y L++ +L A V E ++ Y+ ++ Y L + ++K
Sbjct: 240 VTYTILIDNVCNGKNLREATRLLEVLGEAGFKPDCYV-YNTIMKGYCILDKGSEAIGVYK 298
Query: 211 SLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDV 270
++ + Y ++ G +KE + +D + +G F D
Sbjct: 299 KMKEEGVEPDLVTYNTLIFGLSKSGRVKEARKFLDIMAE--------------MGHFPDA 344
Query: 271 --------GLTEKANEFHMLLL-----QKNCAPTNAS 294
GL + N L L K C+P + +
Sbjct: 345 VTYTSLMNGLCREGNALGALALLEEMEAKGCSPNSCT 381
>gi|452823780|gb|EME30788.1| mitochondrial protein translocase, MPT family [Galdieria
sulphuraria]
Length = 925
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 114/265 (43%), Gaps = 22/265 (8%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
S Y++LL + + A +++E ++Q +A MYN ++ S+G +E +V
Sbjct: 469 SYVYSSLLQACVRSNRFDLALKVYEHLQQEGYVMDAHMYNTLVNGAGSLGDLETAERLVR 528
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGS---DDWVKYVNLVNIY 160
+ + NV D N ++ SCA +I + + EMS + GS + Y L+N+Y
Sbjct: 529 QAQEYNVGLDTALCNTFLVSCAKHHDISRAEHLFLEMSNGNMGSLALPNGKTYNILINLY 588
Query: 161 ITASHLVNAESSTLVEAEKSITQRQWI--------TYDFLIILYAGLGNKDKIDQIWKSL 212
+ VE + +RQ + T+ +I Y + + K +++K L
Sbjct: 589 CKM-------NPPQVERALEMVERQRMYGFSPDESTFCPIIDAYFRVNDPFKAIELFKKL 641
Query: 213 RMTKQKMTSR-NYICILSSYLMLGHLKEVGEIIDQWKQSATS--DFDISACNRLLGAFSD 269
R SR Y +++ G+L + E+ + + S TS D + N LL AF +
Sbjct: 642 RTEGSPKLSRVTYDTVINGLGRSGYLDDAFEVF-RIRASETSLESLDDTTYNNLLNAFVE 700
Query: 270 VGLTEKANEFHMLLLQKNCAPTNAS 294
++A F L P+ A+
Sbjct: 701 NNRLDEAERFFQESLASGFQPSTAT 725
>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Brachypodium distachyon]
Length = 524
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 58/115 (50%), Gaps = 1/115 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT+L+H + ++ + LF + + + MYN ++ + + G +++ ++ E+
Sbjct: 326 TYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEM 385
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
++K + PD TYN + +D+ + ++EM+ G D V Y L++ Y
Sbjct: 386 EKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMT-KRGIQPDLVSYNTLISGY 439
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 117/285 (41%), Gaps = 14/285 (4%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSET---YTALLHLYAGAKWTEKAEELFERV 70
YAT I KV + + F+ + K Y AL+ Y E A +
Sbjct: 186 YATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEVALRYRGEM 245
Query: 71 KQSNLSFNALMYNEMM-TLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS-CAATL 128
+S YN + TL+M G+ + +VEE+ K + PD FTYN+ I+ C
Sbjct: 246 VDRGVSMTVATYNLFVHTLFME-GRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGK 304
Query: 129 NIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWIT 188
+K F E+ G V Y +L++ ++ +V +A + +
Sbjct: 305 EKKAMKMF--EVMVGKGIRATVVTYTSLIHA-LSMKGMVQETDRLFNDAVRRGIRPDLFM 361
Query: 189 YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN--YICILSSYLMLGHLKEVGEIIDQ 246
Y+ LI + G+ D+ +I M K+++T + Y ++ +LG L E +I++
Sbjct: 362 YNALINSHCTGGDMDRAFEIMGE--MEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEE 419
Query: 247 WKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 291
+ D+ + N L+ +S G + A + ++ K PT
Sbjct: 420 MTKRGIQP-DLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPT 463
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 118/294 (40%), Gaps = 45/294 (15%)
Query: 37 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 96
LPLS + T+ +L A +A EL ++ S NA+ YN ++ + + G+V+
Sbjct: 112 LPLS---TTTFNIMLRHLCTAGKPVRALELLRQMP----SPNAVTYNTVIAGFCARGRVQ 164
Query: 97 KVALVVEEIK-RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM--------------- 140
++ E++ R + PD +TY IS ++ K DEM
Sbjct: 165 AGIEIMREMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNA 224
Query: 141 ----SCDSGGSDDWVKY------------VNLVNIYITASHLVN--AESSTLVE--AEKS 180
CD G + ++Y V N+++ + AE+ LVE EK
Sbjct: 225 LIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKG 284
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 240
+ + TY+ LI Y G + K ++++ + + T Y ++ + M G ++E
Sbjct: 285 LAPDAF-TYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQET 343
Query: 241 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
+ + + D+ N L+ + G ++A E + +K P + +
Sbjct: 344 DRLFNDAVRRGIRP-DLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVT 396
>gi|302816960|ref|XP_002990157.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
gi|300142012|gb|EFJ08717.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
Length = 760
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 68/150 (45%), Gaps = 5/150 (3%)
Query: 14 YATRIDLMTKVFGI---HSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERV 70
Y T +D+ ++ HS R E AK TY ALL Y +A L E +
Sbjct: 334 YNTMVDIHARLGNFDEAHSIRRAMEEAGF-AKDIVTYNALLDSYGKQGKFREAMSLLEEM 392
Query: 71 KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 130
KQ S N L Y+ ++ Y G + +++K+ + PD+ Y+ + C +
Sbjct: 393 KQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSP 452
Query: 131 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
D+ L+EM+ D+G + + Y +L++ Y
Sbjct: 453 DEALALLEEMA-DNGIRPNVITYNSLLDAY 481
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 64/153 (41%), Gaps = 4/153 (2%)
Query: 11 DSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSE---TYTALLHLYAGAKWTEKAEELF 67
D Y T I + +H G E + S+ TY+ ++ YA +A LF
Sbjct: 260 DVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALF 319
Query: 68 ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAAT 127
+ ++ N+ + + YN M+ ++ +G ++ + ++ DI TYN + S
Sbjct: 320 QEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQ 379
Query: 128 LNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
+ L+EM G S + + Y L++ Y
Sbjct: 380 GKFREAMSLLEEMK-QRGASPNILTYSALIDAY 411
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 45/244 (18%), Positives = 100/244 (40%), Gaps = 3/244 (1%)
Query: 34 FEGLPLSAKTS-ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSV 92
FE + + K + Y A++ + A +F + + +S + + +N +++
Sbjct: 179 FEAMKVVCKPNLVVYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRA 238
Query: 93 GQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVK 152
+ E+ + E++ + + D TYN I++ + ++ M+ SG +
Sbjct: 239 NRWEECDRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVIT 298
Query: 153 YVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 212
Y +++ Y L + + E + I Y+ ++ ++A LGN D+ I +++
Sbjct: 299 YSTMIDGYAKLG-LAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAM 357
Query: 213 RMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGL 272
Y +L SY G +E ++++ KQ S +I + L+ A+ G
Sbjct: 358 EEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASP-NILTYSALIDAYCKHGF 416
Query: 273 TEKA 276
A
Sbjct: 417 HRDA 420
>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
Length = 554
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 112/254 (44%), Gaps = 15/254 (5%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY AL++ A+ A++L ++ + ++ +N ++ Y GQ+EK +V+ E+
Sbjct: 275 TYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEM 334
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA-- 163
+ + P++ +Y +++ I + LD+M D + + N I A
Sbjct: 335 QENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMF-----HKDVLPNAQVYNAIIDAYV 389
Query: 164 SHLVNAESSTLVEAEKS-ITQRQWITYDFLIILYAGLGNKDKI---DQIWKSLRMTKQKM 219
H N ++ LVE KS +TY+ LI GL N+ +I ++I SL +
Sbjct: 390 EHGPNDQAFILVEKMKSNGISPSIVTYNLLI---KGLCNQSQISEAEEIINSLSNHRLIP 446
Query: 220 TSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 279
+ +Y ++S+ G++ + ++ + + + ++L+ G +
Sbjct: 447 DAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKS-TVRTYHQLISGLGGAGRLNEMEYL 505
Query: 280 HMLLLQKNCAPTNA 293
+ ++Q N P+NA
Sbjct: 506 YQKMMQNNVVPSNA 519
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 106/249 (42%), Gaps = 11/249 (4%)
Query: 42 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 101
T ET+ L+ Y EK + ++++ L N + Y ++ + G++ + +
Sbjct: 306 PTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAI 365
Query: 102 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 161
++++ K+V+P+ YN I + DQ +++M + G S V Y L+
Sbjct: 366 LDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSN-GISPSIVTYNLLIKGLC 424
Query: 162 TASHLVNAESSTLVEAEKSITQRQWI----TYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 217
S + AE E S++ + I +Y+ LI GN DK + + +
Sbjct: 425 NQSQISEAE-----EIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGI 479
Query: 218 KMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 277
K T R Y ++S G L E+ + + Q+ + + N ++ A+S G KA
Sbjct: 480 KSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSN-AIHNIMVEAYSKYGNEIKAE 538
Query: 278 EFHMLLLQK 286
+ +LQK
Sbjct: 539 DLRKEMLQK 547
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 1/104 (0%)
Query: 63 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 122
AEE+ + + + L ++YN ++ Y G++E ++K +++ PD TYN I+
Sbjct: 222 AEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALIN 281
Query: 123 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
I + L EM D+G + + L++ Y L
Sbjct: 282 GLCKAERITNAQDLLMEMQ-DNGVNPTVETFNTLIDAYGRTGQL 324
>gi|2980784|emb|CAA18211.1| puative protein [Arabidopsis thaliana]
gi|7269983|emb|CAB79800.1| puative protein [Arabidopsis thaliana]
Length = 1075
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 60/124 (48%), Gaps = 4/124 (3%)
Query: 34 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 93
F+G +S E Y LL Y K EK + +R+K+S + YN M+ +Y G
Sbjct: 932 FDGFSVSL---EAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQG 988
Query: 94 QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKY 153
+++VA V++E+K + PD+ +YN I + +++ + EM D V Y
Sbjct: 989 WIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMR-GRNIIPDKVTY 1047
Query: 154 VNLV 157
NLV
Sbjct: 1048 TNLV 1051
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/244 (18%), Positives = 100/244 (40%), Gaps = 4/244 (1%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
+ +L +Y +K + L+ R+++S + +N MYN ++ +++++ EE+
Sbjct: 803 FRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMI 862
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
R P+ T+N+ + +V + + G D + Y ++ Y
Sbjct: 863 RYGFTPNTVTFNVLLDVYGKAKLFKKVNELF--LLAKRHGVVDVISYNTIIAAYGKNKDY 920
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 226
N SS + + Y+ L+ Y +K I K ++ + Y
Sbjct: 921 TNM-SSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNI 979
Query: 227 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 286
+++ Y G + EV +++ + K+S D+ + N L+ A+ G+ E+A + +
Sbjct: 980 MINIYGEQGWIDEVADVLKELKESGLGP-DLCSYNTLIKAYGIGGMVEEAVGLVKEMRGR 1038
Query: 287 NCAP 290
N P
Sbjct: 1039 NIIP 1042
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 60/149 (40%), Gaps = 35/149 (23%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSN----LSFNALM-------------------- 81
T+ LL +Y AK +K ELF K+ +S+N ++
Sbjct: 872 TFNVLLDVYGKAKLFKKVNELFLLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQ 931
Query: 82 ----------YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
YN ++ Y Q+EK +++ +K+ PD +TYN+ I+ ID
Sbjct: 932 FDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWID 991
Query: 132 QVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
+V L E+ +SG D Y L+ Y
Sbjct: 992 EVADVLKELK-ESGLGPDLCSYNTLIKAY 1019
>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
Length = 736
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 89/203 (43%), Gaps = 8/203 (3%)
Query: 55 AGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDI 114
G +KA +L + + + + Y++++T +VEK L+ +E+K V PD+
Sbjct: 199 CGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDV 258
Query: 115 FTYNLWISS-CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES-- 171
+TY + I S C A L I+Q + +EM G S V Y L++ Y+ A + A
Sbjct: 259 YTYTILIDSFCKAGL-IEQAQWLFEEMR-SVGCSPTVVTYTALIHAYLKAKQVPQANDIF 316
Query: 172 STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSY 231
+V+A + +TY L+ GN K +++ L T S Y +
Sbjct: 317 HRMVDAG---CRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRH 373
Query: 232 LMLGHLKEVGEIIDQWKQSATSD 254
+ ++ G ++D ++ D
Sbjct: 374 TLAPNVVTYGALVDGLCKAHKVD 396
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 120/307 (39%), Gaps = 25/307 (8%)
Query: 4 HKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTE 61
K FV S Y+ I + + F+ + + T + TYT L+ + A E
Sbjct: 216 RKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIE 275
Query: 62 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 121
+A+ LFE ++ S + Y ++ Y+ QV + + + P+ TY +
Sbjct: 276 QAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALV 335
Query: 122 SSCAATLNIDQVKKFLDEM--SCDSGGSDDW-------------VKYVNLVNIYITASHL 166
NI + + ++ + DS SD + V Y LV+ + +H
Sbjct: 336 DGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVD-GLCKAHK 394
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM--TSRNY 224
V+ L S + I YD LI + G D +++ L+MTK + Y
Sbjct: 395 VDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVF--LQMTKCGYLPSVHTY 452
Query: 225 ICILSSYLMLGHLKEVGEIIDQW-KQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 283
++ G L +++ Q K S T ++ ++ +G +EKA + L+
Sbjct: 453 TSLIDRMFKDGRLDLAMKVLSQMLKDSCTP--NVVTYTAMIDGLCRIGESEKALKLLSLM 510
Query: 284 LQKNCAP 290
+K C+P
Sbjct: 511 EEKGCSP 517
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYTA++ +EKA +L +++ S N + Y ++ G+++ + ++
Sbjct: 486 TYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQM 545
Query: 106 KRKNVVPDIFTYNLWISS-CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 155
RK P+ TY + I+ CAA L +D+ + L EM W KY+
Sbjct: 546 SRKGCSPNYVTYRVLINHLCAAGL-LDKARLLLGEMK-----QTYWPKYLQ 590
Score = 37.7 bits (86), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 96/247 (38%), Gaps = 21/247 (8%)
Query: 63 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 122
AE+++ + +N N + VG+ +K +++E+ RK VPD TY+ I+
Sbjct: 172 AEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVIT 231
Query: 123 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI- 181
+++ EM G + D Y L++ + A + A+ L E +S+
Sbjct: 232 FLCHATKVEKAFLLFQEMK-MVGVTPDVYTYTILIDSFCKAGLIEQAQ--WLFEEMRSVG 288
Query: 182 TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVG 241
+TY LI Y + + I+ + + Y ++ G++ +
Sbjct: 289 CSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAF 348
Query: 242 EIIDQW---KQSATSDFDISACNR--------LLGAFSDVGLTE--KANEFHMLL---LQ 285
E+ + SA SDF +R GA D GL + K + H LL L
Sbjct: 349 EVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVD-GLCKAHKVDHAHELLDAMLS 407
Query: 286 KNCAPTN 292
C P +
Sbjct: 408 SGCEPNH 414
>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
Length = 691
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 112/254 (44%), Gaps = 15/254 (5%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY AL++ A+ A++L ++ + ++ +N ++ Y GQ+EK +V+ E+
Sbjct: 412 TYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEM 471
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA-- 163
+ + P++ +Y +++ I + LD+M D + + N I A
Sbjct: 472 QENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMF-----HKDVLPNAQVYNAIIDAYV 526
Query: 164 SHLVNAESSTLVEAEKS-ITQRQWITYDFLIILYAGLGNKDKI---DQIWKSLRMTKQKM 219
H N ++ LVE KS +TY+ LI GL N+ +I ++I SL +
Sbjct: 527 EHGPNDQAFILVEKMKSNGISPSIVTYNLLI---KGLCNQSQISEAEEIINSLSNHRLIP 583
Query: 220 TSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 279
+ +Y ++S+ G++ + ++ + + + ++L+ G +
Sbjct: 584 DAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKS-TVRTYHQLISGLGGAGRLNEMEYL 642
Query: 280 HMLLLQKNCAPTNA 293
+ ++Q N P+NA
Sbjct: 643 YQKMMQNNVVPSNA 656
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 106/249 (42%), Gaps = 11/249 (4%)
Query: 42 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 101
T ET+ L+ Y EK + ++++ L N + Y ++ + G++ + +
Sbjct: 443 PTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAI 502
Query: 102 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 161
++++ K+V+P+ YN I + DQ +++M +G S V Y L+
Sbjct: 503 LDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMK-SNGISPSIVTYNLLIKGLC 561
Query: 162 TASHLVNAESSTLVEAEKSITQRQWI----TYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 217
S + AE E S++ + I +Y+ LI GN DK + + +
Sbjct: 562 NQSQISEAE-----EIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGI 616
Query: 218 KMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 277
K T R Y ++S G L E+ + + Q+ + + N ++ A+S G KA
Sbjct: 617 KSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSN-AIHNIMVEAYSKYGNEIKAE 675
Query: 278 EFHMLLLQK 286
+ +LQK
Sbjct: 676 DLRKEMLQK 684
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 1/98 (1%)
Query: 63 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 122
AEE+ + + + L ++YN ++ Y G++E ++K +++ PD TYN I+
Sbjct: 359 AEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALIN 418
Query: 123 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
I + L EM D+G + + L++ Y
Sbjct: 419 GLCKAERITNAQDLLMEMQ-DNGVNPTVETFNTLIDAY 455
>gi|356503440|ref|XP_003520516.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Glycine max]
Length = 832
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 81/190 (42%), Gaps = 2/190 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+T+++HLY+ E E F + L N + YN ++ Y + G + L EI
Sbjct: 330 TFTSIIHLYSVCGQVENCEAAFNMMIAEGLKPNIVSYNALIGAYAARGMDNEAHLFFNEI 389
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K+ PDI +Y +++ + + ++ D M + + V Y L++ Y +
Sbjct: 390 KQNGFRPDIVSYTSLLNAYGRSQKPHKARQIFDRMK-RNKLKPNLVSYNALIDAYGSNGL 448
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
L +A L E E+ Q ++ L+ K KID + + M K+ + Y
Sbjct: 449 LADA-IKILREMEQEGIQPNVVSICTLLAACGRCSRKVKIDTVLTAAEMRGIKLNTVAYN 507
Query: 226 CILSSYLMLG 235
+ S + +G
Sbjct: 508 AAIGSCMNVG 517
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 108/250 (43%), Gaps = 7/250 (2%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
++ Y ++ L+A T++A LF +++ + YN ++ + GQ +++
Sbjct: 151 NDIYNMMIRLHARHNRTDQARGLFFEMQEWRCKPDVETYNAIINAHGRAGQWRWAMNIMD 210
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
++ R + P TYN I++C ++ N + +M+ ++G D V + +++ + +
Sbjct: 211 DMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMT-ENGVGPDLVTHNIILSAFKSG 269
Query: 164 SHLVNAESSTLVEAEKSITQRQ-WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 222
+ A S E K R T + +I L DK +I+ S+R K + T
Sbjct: 270 AQYSKALS--YFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIEIFNSMREKKSECTPD 327
Query: 223 --NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 280
+ I+ Y + G ++ + +I + N L+GA++ G+ +A+ F
Sbjct: 328 VVTFTSIIHLYSVCGQVENCEAAFNMMIAEGLKP-NIVSYNALIGAYAARGMDNEAHLFF 386
Query: 281 MLLLQKNCAP 290
+ Q P
Sbjct: 387 NEIKQNGFRP 396
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 58/126 (46%), Gaps = 2/126 (1%)
Query: 2 VTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKW 59
+ H + LS Y++ I +K I E F + S + TYTA+L Y A+
Sbjct: 564 IMHLKLPLSKEVYSSAICAYSKQGQIVEAESTFNLMKSSGCYPDVVTYTAMLDAYNAAEN 623
Query: 60 TEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNL 119
EKA LFE ++ S++ + + +M + GQ +V + E ++ K + +
Sbjct: 624 WEKAYALFEEMEASSIKLDTIACAALMRSFNKGGQPGRVLSLAESMREKEIPFSDTIFFE 683
Query: 120 WISSCA 125
+S+C+
Sbjct: 684 MVSACS 689
>gi|108711050|gb|ABF98845.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215693326|dbj|BAG88708.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625789|gb|EEE59921.1| hypothetical protein OsJ_12549 [Oryza sativa Japonica Group]
Length = 554
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 54/102 (52%), Gaps = 3/102 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT L+H A T +A + F+++K+ ++ +A YN ++ + G++E VVEE+
Sbjct: 342 TYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEM 401
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFL---DEMSCDS 144
+ + P++ T+N IS+ + K L +E SC+
Sbjct: 402 RTTGIAPNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNP 443
Score = 40.8 bits (94), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 31/155 (20%), Positives = 69/155 (44%), Gaps = 2/155 (1%)
Query: 18 IDLMTKVFGIHSGERYFEGLPLSAKTSE-TYTALLHLYAGAKWTEKAEELFERVKQSNLS 76
+D + K + F+ L + E ++ L+H + A+ ++A + E +KQ S
Sbjct: 243 LDTLCKERSVKRARGVFQELRGTIPPDENSFNTLVHGWCKARMLKEALDTMEEMKQHGFS 302
Query: 77 FNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKF 136
+ + Y ++ Y + V +++E++++ P++ TY + + + +
Sbjct: 303 PSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTILMHALGKAGRTREALDT 362
Query: 137 LDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES 171
D++ D G + D Y +L+ I A L +A S
Sbjct: 363 FDKLKED-GVAPDASFYNSLIYILGRAGRLEDAYS 396
>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
Length = 440
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 71/154 (46%), Gaps = 17/154 (11%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY ALL A+ L+ER+ ++ S + + YN ++ + VG++++ + +
Sbjct: 12 TYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKIFDGA 71
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
++ VPD+ TYN I+ +D+ ++ L M + NLV +T +
Sbjct: 72 VKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSE-----------NLVPDVVTYNS 120
Query: 166 LVNA--ESSTLVEAEKSITQRQW----ITYDFLI 193
LVN ++ + EA I + + ITY LI
Sbjct: 121 LVNGLCKNGRVDEARMLIVDKGFSPNVITYSTLI 154
Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 48/250 (19%), Positives = 104/250 (41%), Gaps = 10/250 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L+ +A ELF + + L +A+ Y + G+VE L+++++
Sbjct: 185 TYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDM 244
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K VPD+ ++N I+ +D+ + L M G S + + + L+ A
Sbjct: 245 DEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEA-KGCSPNAISFNTLICGQCRAGK 303
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
A +T E K + +TY+ IL GL + +I +++ + +
Sbjct: 304 WKKA-MTTFKEMLKRGVKPTVVTYN---ILVDGLCKARQEGRIKEAITLFDAMIEKGRVP 359
Query: 226 CILSSYLMLGHLKEVGEIIDQWK-----QSATSDFDISACNRLLGAFSDVGLTEKANEFH 280
+++ ++ L + G++ D + ++ ++ N L+ + ++A E
Sbjct: 360 DVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELF 419
Query: 281 MLLLQKNCAP 290
+ +++K C P
Sbjct: 420 VAMVEKGCVP 429
>gi|77557056|gb|ABA99852.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 726
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/263 (19%), Positives = 110/263 (41%), Gaps = 22/263 (8%)
Query: 42 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 101
+ +E + L+ Y+ A A + +++ + + + N + + + G+V+K
Sbjct: 160 RGTEQFAQLMLSYSRAGKLRSAMRVLHLMQKDGCAPDISICNMAVNVLVVAGRVDKALEF 219
Query: 102 VEEIKRKNVVPDIFTYNLWISS-CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
E ++R V PD++TYN I C A +D ++ + + +G D + Y Y
Sbjct: 220 AERMRRVGVEPDVYTYNCLIKGLCGARRVVDAME--MIGVMLQNGCPPDKISY------Y 271
Query: 161 ITASHLVNAESSTLVEAEKSITQR---------QWITYDFLIILYAGLGNKDKIDQIWKS 211
S L + VE + + QR +TY+ LI A G+ D+ + +
Sbjct: 272 TVMSFLCKEKR---VEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRE 328
Query: 212 LRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 271
+ ++ Y I+ S+ + G + E EI+ + S D+ + ++ F +G
Sbjct: 329 SEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEM-ISKGCQPDVVTYSTVVDGFCRIG 387
Query: 272 LTEKANEFHMLLLQKNCAPTNAS 294
++A + + + +C P +
Sbjct: 388 ELDQARKMMKHMYKNDCKPNTVT 410
>gi|297851460|ref|XP_002893611.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
lyrata]
gi|297339453|gb|EFH69870.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
lyrata]
Length = 814
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/253 (17%), Positives = 102/253 (40%), Gaps = 1/253 (0%)
Query: 42 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 101
+T E + ++ Y+ A A ++ ++++ + N L+ N + +++ ++EK
Sbjct: 243 RTPEAFLRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRF 302
Query: 102 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 161
+E ++ +VP++ TYN I +++ + LD+M G D V Y ++
Sbjct: 303 LERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLDDMP-SKGCLPDKVSYYTIMGYLC 361
Query: 162 TASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 221
+V A++ R +TY+ LI + + D+ K ++
Sbjct: 362 KEKRIVEVRDLMKKMAKEHGLVRDQVTYNTLIHMLTKHDHADEALWFLKDAEEKGFRIDK 421
Query: 222 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 281
Y I+ + G + E ++I++ D+ ++ F +G +KA +
Sbjct: 422 VGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQ 481
Query: 282 LLLQKNCAPTNAS 294
++ P S
Sbjct: 482 IMHTHGYKPNTVS 494
>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 506
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 112/254 (44%), Gaps = 15/254 (5%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY AL++ A+ A++L ++ + ++ +N ++ Y GQ+EK +V+ E+
Sbjct: 227 TYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEM 286
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA-- 163
+ + P++ +Y +++ I + LD+M D + + N I A
Sbjct: 287 QENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMF-----HKDVLPNAQVYNAIIDAYV 341
Query: 164 SHLVNAESSTLVEAEKS-ITQRQWITYDFLIILYAGLGNKDKI---DQIWKSLRMTKQKM 219
H N ++ LVE KS +TY+ LI GL N+ +I ++I SL +
Sbjct: 342 EHGPNDQAFILVEKMKSNGISPSIVTYNLLI---KGLCNQSQISEAEEIINSLSNHRLIP 398
Query: 220 TSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 279
+ +Y ++S+ G++ + ++ + + + ++L+ G +
Sbjct: 399 DAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKS-TVRTYHQLISGLGGAGRLNEMEYL 457
Query: 280 HMLLLQKNCAPTNA 293
+ ++Q N P+NA
Sbjct: 458 YQKMMQNNVVPSNA 471
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 106/249 (42%), Gaps = 11/249 (4%)
Query: 42 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 101
T ET+ L+ Y EK + ++++ L N + Y ++ + G++ + +
Sbjct: 258 PTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAI 317
Query: 102 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 161
++++ K+V+P+ YN I + DQ +++M + G S V Y L+
Sbjct: 318 LDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSN-GISPSIVTYNLLIKGLC 376
Query: 162 TASHLVNAESSTLVEAEKSITQRQWI----TYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 217
S + AE E S++ + I +Y+ LI GN DK + + +
Sbjct: 377 NQSQISEAE-----EIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGI 431
Query: 218 KMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 277
K T R Y ++S G L E+ + + Q+ + + N ++ A+S G KA
Sbjct: 432 KSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSN-AIHNIMVEAYSKYGNEIKAE 490
Query: 278 EFHMLLLQK 286
+ +LQK
Sbjct: 491 DLRKEMLQK 499
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 1/104 (0%)
Query: 63 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 122
AEE+ + + + L ++YN ++ Y G++E ++K +++ PD TYN I+
Sbjct: 174 AEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALIN 233
Query: 123 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
I + L EM D+G + + L++ Y L
Sbjct: 234 GLCKAERITNAQDLLMEMQ-DNGVNPTVETFNTLIDAYGRTGQL 276
>gi|302757275|ref|XP_002962061.1| hypothetical protein SELMODRAFT_76226 [Selaginella moellendorffii]
gi|300170720|gb|EFJ37321.1| hypothetical protein SELMODRAFT_76226 [Selaginella moellendorffii]
Length = 847
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 102/217 (47%), Gaps = 8/217 (3%)
Query: 27 IHSGERYFEGLPLSA-KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEM 85
IHS + +GL L++ T TA++ YA E+A E+FER++ L + + + M
Sbjct: 120 IHS-RIHQQGLKLTSNPTVICSTAMIDAYAQNGHIEQAAEIFERMQLQVLDPDLIAWTAM 178
Query: 86 MTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSG 145
MT Y +G + L+ ++ + + PD F + I +C++ +++Q + S
Sbjct: 179 MTAYNQLGHAREALLLFRKMDLQGLEPDRFAFVAAIDACSSIPSLEQGTVLHSRLLASSV 238
Query: 146 GSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKI 205
D V L+N Y A LV+ ES +L S+ + +T+ ++ YA G+ +
Sbjct: 239 ECDGVVGNA-LLNFYAKAG-LVH-ESRSLFS---SMKVKNVVTWSAIVAAYAQNGHHEPA 292
Query: 206 DQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 242
++++ + + ++ +L S G +K++
Sbjct: 293 VELFREMLLDGVAPNKVTFVSLLFSCSHAGLIKDLAR 329
>gi|356536609|ref|XP_003536829.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g23020-like [Glycine max]
Length = 787
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 116/240 (48%), Gaps = 7/240 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+Y++L+H+ A A A+ ++++++ L + + Y +++ + +GQ E + +E+
Sbjct: 491 SYSSLIHILASADKPHLAKSYLKKMQEAGLVSDCVPYCVVISSFTKLGQFEMAEELYKEM 550
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
V PD+ Y ++I++ A ++ + +++EM +G + Y +L+ +Y +
Sbjct: 551 LGYAVQPDVIIYGVFINAFADAGSVKEAINYVNEMR-KAGLPGNPAIYNSLIKLYTKVGY 609
Query: 166 LVNA-ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
L A E+ L++ S + + +I LY ++ +I++SL M + +Y
Sbjct: 610 LKEAQETYKLIQL--SDEGPSLFSSNCMIDLYTERLMVEQAKEIFESL-MKNEVANEFSY 666
Query: 225 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFS-DVGLTEKANEFHMLL 283
+L Y +G L E +I Q ++ DI + N +LG +S D L E F ++
Sbjct: 667 AMMLCMYKKIGRLDEAIQIATQMRRLGFLT-DILSYNNVLGLYSMDRRLREATETFKEMI 725
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 56/128 (43%), Gaps = 1/128 (0%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 102
+S TY L+ Y A E F R+ + + N + N M+ LY + G++ + L+
Sbjct: 245 SSHTYATLIDTYGKGGQFHAACETFARIIRQGRALNTVTLNTMIHLYGNCGRLRQACLLF 304
Query: 103 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 162
+++ VPD +TYN+ IS + K+ M + D V Y L+ Y T
Sbjct: 305 QKMGEFRCVPDTWTYNILISLNIKNNKVKLAAKYFARMK-KAFLEPDVVSYRTLLYAYST 363
Query: 163 ASHLVNAE 170
+ AE
Sbjct: 364 RKMVREAE 371
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 73/150 (48%), Gaps = 4/150 (2%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTA--LLHLYAGAKWTEKAEELFERVK 71
Y + I L TKV + + ++ + LS + +++ ++ LY E+A+E+FE +
Sbjct: 597 YNSLIKLYTKVGYLKEAQETYKLIQLSDEGPSLFSSNCMIDLYTERLMVEQAKEIFESLM 656
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
++ ++ N Y M+ +Y +G++++ + +++R + DI +YN + + +
Sbjct: 657 KNEVA-NEFSYAMMLCMYKKIGRLDEAIQIATQMRRLGFLTDILSYNNVLGLYSMDRRLR 715
Query: 132 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 161
+ + EM SG D + L NI +
Sbjct: 716 EATETFKEM-IKSGVQPDDFTFRALANILL 744
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 63/142 (44%), Gaps = 2/142 (1%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYT--ALLHLYAGAK 58
+V+H LS YAT ID K H+ F + + T T ++HLY
Sbjct: 236 VVSHTNVCLSSHTYATLIDTYGKGGQFHAACETFARIIRQGRALNTVTLNTMIHLYGNCG 295
Query: 59 WTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYN 118
+A LF+++ + + YN +++L + +V+ A +K+ + PD+ +Y
Sbjct: 296 RLRQACLLFQKMGEFRCVPDTWTYNILISLNIKNNKVKLAAKYFARMKKAFLEPDVVSYR 355
Query: 119 LWISSCAATLNIDQVKKFLDEM 140
+ + + + + ++ + EM
Sbjct: 356 TLLYAYSTRKMVREAEELIREM 377
>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 762
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/210 (20%), Positives = 94/210 (44%), Gaps = 6/210 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L+ + +K F ++++ N + YN ++ Y +G++++ +++ +
Sbjct: 216 TYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSM 275
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K + P++ +YN+ I+ ++ + + L+EM G + D V Y L+N Y
Sbjct: 276 SSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGY-KGFTPDEVTYNTLLNGYCKEG- 333
Query: 166 LVNAESSTLVEAE--KSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 223
N + ++ AE ++ +TY LI N ++ + + +R+ + R
Sbjct: 334 --NFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERT 391
Query: 224 YICILSSYLMLGHLKEVGEIIDQWKQSATS 253
Y ++ + G L E I+++ +S S
Sbjct: 392 YTTLIDGFSRQGLLNEAYRILNEMTESGFS 421
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 75/164 (45%), Gaps = 8/164 (4%)
Query: 1 MVTHKEFV---LSDS--DYATRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHL 53
+V H E V +S S Y I+ M K ++ +F+ + + TYT L+
Sbjct: 339 LVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDG 398
Query: 54 YAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPD 113
++ +A + + +S S + + YN + + + ++E+ VV+E+ K + PD
Sbjct: 399 FSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPD 458
Query: 114 IFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 157
+ +Y+ IS +D+ + EM + G S D V Y +L+
Sbjct: 459 VVSYSTIISGFCRKGELDRAFQMKQEM-VEKGVSPDAVTYSSLI 501
>gi|357500061|ref|XP_003620319.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495334|gb|AES76537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 496
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/206 (19%), Positives = 88/206 (42%), Gaps = 2/206 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY++L+ Y K KA+ +F + Q ++ + YN ++ + + + + EE+
Sbjct: 256 TYSSLMDGYCLVKEVNKAKSIFNNMAQGGVNPDIQSYNILINGFCKIKMTDAAMNLFEEM 315
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ ++P++ TYN I + I K +DEM D G D + Y +L++ + +H
Sbjct: 316 HCRKIIPNVVTYNSLIDGLCKSGKISYALKLVDEMH-DRGQPPDIITYSSLLDA-LCKNH 373
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ + L + + Q TY LI G + I++ L + + Y
Sbjct: 374 PGDKAIALLTKLKDQGLQPNMYTYTILINGLCKGGRPEDAQNIFEDLLVKGYNINVNTYT 433
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSA 251
++ + G E ++ + +++
Sbjct: 434 VMIHVFCNNGMFGEALAMLSKMEENG 459
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 51/114 (44%), Gaps = 1/114 (0%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
++Y L++ + K T+ A LFE + + N + YN ++ G++ +V+E
Sbjct: 290 QSYNILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYALKLVDE 349
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 158
+ + PDI TY+ + + D+ L ++ D G + Y L+N
Sbjct: 350 MHDRGQPPDIITYSSLLDALCKNHPGDKAIALLTKLK-DQGLQPNMYTYTILIN 402
>gi|125580078|gb|EAZ21224.1| hypothetical protein OsJ_36877 [Oryza sativa Japonica Group]
Length = 726
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/263 (19%), Positives = 110/263 (41%), Gaps = 22/263 (8%)
Query: 42 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 101
+ +E + L+ Y+ A A + +++ + + + N + + + G+V+K
Sbjct: 160 RGTEQFAQLMLSYSRAGKLRSAMRVLHLMQKDGCAPDISICNMAVNVLVVAGRVDKALEF 219
Query: 102 VEEIKRKNVVPDIFTYNLWISS-CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
E ++R V PD++TYN I C A +D ++ + + +G D + Y Y
Sbjct: 220 AERMRRVGVEPDVYTYNCLIKGLCGARRVVDAME--MIGVMLQNGCPPDKISY------Y 271
Query: 161 ITASHLVNAESSTLVEAEKSITQR---------QWITYDFLIILYAGLGNKDKIDQIWKS 211
S L + VE + + QR +TY+ LI A G+ D+ + +
Sbjct: 272 TVMSFLCKEKR---VEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRE 328
Query: 212 LRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 271
+ ++ Y I+ S+ + G + E EI+ + S D+ + ++ F +G
Sbjct: 329 SEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMI-SKGCQPDVVTYSTVVDGFCRIG 387
Query: 272 LTEKANEFHMLLLQKNCAPTNAS 294
++A + + + +C P +
Sbjct: 388 ELDQARKMMKHMYKNDCKPNTVT 410
>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 704
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 86/193 (44%), Gaps = 2/193 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT L+ G T++A +L + + + NA+ YN ++ G V +VE +
Sbjct: 319 TYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELM 378
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSD-DWVKYVNLVNIYITAS 164
K++ PD TYN+ + A ++D+ K L M DS +D D + Y L++ +
Sbjct: 379 KKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKEN 438
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
L A + EK + +T + L+ G+ +K ++WK + +K S Y
Sbjct: 439 RLHQALDIYDLLVEK-LGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTY 497
Query: 225 ICILSSYLMLGHL 237
++ + G L
Sbjct: 498 TAMIDGFCKTGML 510
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 63/130 (48%), Gaps = 1/130 (0%)
Query: 42 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 101
+ S+TYTA++ + A+ L +++ S L + YN +++ G +++ +
Sbjct: 492 RNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRL 551
Query: 102 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 161
EE++R N PD+ ++N+ I +I + L MS +G S D Y L+N ++
Sbjct: 552 FEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMS-RAGLSPDLFTYSKLINRFL 610
Query: 162 TASHLVNAES 171
+L A S
Sbjct: 611 KLGYLDEAIS 620
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 103/240 (42%), Gaps = 3/240 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+Y ++ + K EKA EL +K S S++ + + ++ + G++++ ++E+
Sbjct: 179 SYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEM 238
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K + D+ Y I +D+ K DE+ + G S + Y L+ +
Sbjct: 239 KFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEV-LERGDSPCAITYNTLIRGFCKLGQ 297
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
L A E+ + + TY LI G+G + Q+ + ++ + Y
Sbjct: 298 LKEASEIFEFMIERGVRPNVY-TYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYN 356
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 285
I++ G + + EI++ K+ T +I+ N LLG G ++A++ L+L+
Sbjct: 357 IIINKLCKDGLVADAVEIVELMKKRRTRPDNITY-NILLGGLCAKGDLDEASKLLYLMLK 415
Score = 44.3 bits (103), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 75/166 (45%), Gaps = 2/166 (1%)
Query: 39 LSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV 98
L A T LL+ A KA EL++++ S + N+ Y M+ + G +
Sbjct: 454 LGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVA 513
Query: 99 ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 158
++ +++ + P +F YN +SS ++DQ + +EM D+ D V + +++
Sbjct: 514 KGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFP-DVVSFNIMID 572
Query: 159 IYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDK 204
+ A + +AE S LV ++ TY LI + LG D+
Sbjct: 573 GSLKAGDIKSAE-SLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDE 617
>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06710, mitochondrial; Flags: Precursor
gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
Length = 987
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 112/286 (39%), Gaps = 55/286 (19%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVK 71
Y +D K I ++F + T TYTAL+H Y AK A ELFE +
Sbjct: 521 YTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETML 580
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPD----------------IF 115
N + Y+ ++ + GQVEK + E + VPD +
Sbjct: 581 SEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVV 640
Query: 116 TYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES---- 171
TY + + +++ +K LD MS + G + + Y L++ L A+
Sbjct: 641 TYGALLDGFCKSHRVEEARKLLDAMSME-GCEPNQIVYDALIDGLCKVGKLDEAQEVKTE 699
Query: 172 -------------STLVEAEKSITQRQWITYDFL-----------IILYA----GLGNKD 203
S+L++ + +RQ + L +++Y GL
Sbjct: 700 MSEHGFPATLYTYSSLIDRYFKV-KRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVG 758
Query: 204 KIDQIWKSLRMTKQKMTSRN---YICILSSYLMLGHLKEVGEIIDQ 246
K D+ +K ++M ++K N Y ++ + M+G ++ E++++
Sbjct: 759 KTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLER 804
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 73/139 (52%), Gaps = 8/139 (5%)
Query: 82 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS-CAATLNIDQVKKFLDEM 140
Y++++ + ++E L+ EE+KR +V D++TY + + S C A L I+Q +K+ +EM
Sbjct: 486 YSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGL-IEQARKWFNEM 544
Query: 141 SCDSGGSDDWVKYVNLVNIYITASHLVNA-ESSTLVEAEKSITQRQWITYDFLIILYAGL 199
+ G + + V Y L++ Y+ A + A E + +E + +TY LI +
Sbjct: 545 R-EVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLP--NIVTYSALIDGHCKA 601
Query: 200 GNKDKIDQIWKSLRMTKQK 218
G +K QI++ RM K
Sbjct: 602 GQVEKACQIFE--RMCGSK 618
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 44/94 (46%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
YT ++ T++A +L + +++ N + Y M+ + +G++E ++E +
Sbjct: 747 YTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMG 806
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
K V P+ TY + I C +D L+EM
Sbjct: 807 SKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM 840
>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 96/213 (45%), Gaps = 8/213 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
YT L+ ++ ++ LF+++++ ++ ++ + G+V+ +++E+
Sbjct: 170 AYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEM 229
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K ++ DI YN+ I S +D KF E+ + G D V Y +++ + A+
Sbjct: 230 KSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEAN-GLKPDEVTYTSMIGVLCKANR 288
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN-- 223
L A EK+ +R TY + ++ G G+ K D+ + L + K + +
Sbjct: 289 LDEA-VEMFEHLEKN--RRVPCTYAYNTMI-MGYGSAGKFDEAYSLLERQRAKGSIPSVI 344
Query: 224 -YICILSSYLMLGHLKEVGEIIDQWKQSATSDF 255
Y CIL+ +G + E + ++ K+ A +
Sbjct: 345 AYNCILTCLRKMGKVDEALRVFEEMKKDAAPNL 377
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/274 (20%), Positives = 107/274 (39%), Gaps = 52/274 (18%)
Query: 8 VLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEE 65
VL Y ID K ++ + E + T TY +++ A ++A
Sbjct: 584 VLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYM 643
Query: 66 LFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCA 125
LFE K + N ++Y+ ++ + VG++++ L++EE+ +K + P+++T+N
Sbjct: 644 LFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWN------- 696
Query: 126 ATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQ 185
+L++ + A + A E T Q
Sbjct: 697 -----------------------------SLLDALVKAEEINEALVCFQSMKELKCTPNQ 727
Query: 186 WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIID 245
+TY LI + +K W+ ++ K ++ +Y ++S G++ E G + D
Sbjct: 728 -VTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFD 786
Query: 246 QWKQSATSDFDISAC-----------NRLLGAFS 268
++K A SAC NR + AFS
Sbjct: 787 RFK--ANGGVPDSACYNAMIEGLSNGNRAMDAFS 818
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/282 (20%), Positives = 120/282 (42%), Gaps = 12/282 (4%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSA-KTSE-TYTALLHLYAGAKWTEKAEELFERVK 71
Y ID KV + ++F + + K E TYT+++ + A ++A E+FE ++
Sbjct: 241 YNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLE 300
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
++ YN M+ Y S G+ ++ ++E + K +P + YN ++ +D
Sbjct: 301 KNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVD 360
Query: 132 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQ-WITYD 190
+ + +EM D+ + + Y L+++ A L A E S+ + +
Sbjct: 361 EALRVFEEMKKDA--APNLSTYNILIDMLCRAGKLDCA-----FELRDSMQKAGLFPNVR 413
Query: 191 FLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQS 250
+ I+ L K+D+ K+ + + I S LG + V + +++
Sbjct: 414 TVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKM 473
Query: 251 ATSDFDISAC--NRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
SD ++ L+ F + G E ++ + ++ +NC+P
Sbjct: 474 LDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSP 515
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 96/243 (39%), Gaps = 10/243 (4%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLS--AKTSETYTALLHLYAGAKWTEKAEELFERVK 71
+ + ID + KV + + +E + S S YT+L+ + E ++++ +
Sbjct: 450 FCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMV 509
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
N S + + N M G+ EK + EEIK + VPD +Y++ I +
Sbjct: 510 NQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFAN 569
Query: 132 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 191
+ + M + G D Y N+V VN L E + + +TY
Sbjct: 570 ETYELFYSMK-EQGCVLDTRAY-NIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGS 627
Query: 192 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN---YICILSSYLMLGHLKEVGEIIDQWK 248
+I GL D++D+ + K K N Y ++ + +G + E I+++
Sbjct: 628 VI---DGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELM 684
Query: 249 QSA 251
Q
Sbjct: 685 QKG 687
>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
Length = 563
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 84/186 (45%), Gaps = 2/186 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
YT L+ E+ ++LF ++ + ++ N Y ++ + +G + + E++
Sbjct: 201 VYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKM 260
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K +VP+++TYN I C ++ + DEM + G + + V Y L+
Sbjct: 261 KLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMR-ERGVACNVVTYNTLIGGLCQERR 319
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
++ AE + ++ I+Y+ LI Y +GN DK ++ ++ + Q + Y
Sbjct: 320 VLEAE-RLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYN 378
Query: 226 CILSSY 231
+++ +
Sbjct: 379 ILIAGF 384
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 89/204 (43%), Gaps = 9/204 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L+ + +AE L R+K+ LS N + YN ++ Y S+G ++K + + ++
Sbjct: 306 TYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQM 365
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K P + TYN+ I+ + N V + EM G S V Y L++ + + +
Sbjct: 366 KSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEA-RGLSPSKVTYTILMDALVRSDN 424
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ A EK+ Y LI +G+ + +++KSL K Y
Sbjct: 425 IEKA-FQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYN 483
Query: 226 CIL-------SSYLMLGHLKEVGE 242
++ SSY L LKE+GE
Sbjct: 484 TMIYGYCKEGSSYRALRLLKEMGE 507
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 85/183 (46%), Gaps = 6/183 (3%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGL-PLSAKTSE-TYTALLHLYAGAKWTEKAEELFERVK 71
Y T ID K I G++ F + L ++ TYT L++ + + EL+E++K
Sbjct: 202 YTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMK 261
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
+ + N YN M+ + G++ + +E++ + V ++ TYN I +
Sbjct: 262 LTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVL 321
Query: 132 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWI-TYD 190
+ ++ + M D G S + + Y L++ Y + +L A S+L KS Q + TY+
Sbjct: 322 EAERLMCRMKRD-GLSPNLISYNTLIDGYCSIGNLDKA--SSLFNQMKSSGQSPSLATYN 378
Query: 191 FLI 193
LI
Sbjct: 379 ILI 381
>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 997
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 112/286 (39%), Gaps = 55/286 (19%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVK 71
Y +D K I ++F + T TYTAL+H Y AK A ELFE +
Sbjct: 521 YTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETML 580
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPD----------------IF 115
N + Y+ ++ + GQVEK + E + VPD +
Sbjct: 581 SEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVV 640
Query: 116 TYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES---- 171
TY + + +++ +K LD MS + G + + Y L++ L A+
Sbjct: 641 TYGALLDGFCKSHRVEEARKLLDAMSME-GCEPNQIVYDALIDGLCKVGKLDEAQEVKTE 699
Query: 172 -------------STLVEAEKSITQRQWITYDFL-----------IILYA----GLGNKD 203
S+L++ + +RQ + L +++Y GL
Sbjct: 700 MSEHGFPATLYTYSSLIDRYFKV-KRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVG 758
Query: 204 KIDQIWKSLRMTKQKMTSRN---YICILSSYLMLGHLKEVGEIIDQ 246
K D+ +K ++M ++K N Y ++ + M+G ++ E++++
Sbjct: 759 KTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLER 804
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 73/139 (52%), Gaps = 8/139 (5%)
Query: 82 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS-CAATLNIDQVKKFLDEM 140
Y++++ + ++E L+ EE+KR +V D++TY + + S C A L I+Q +K+ +EM
Sbjct: 486 YSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGL-IEQARKWFNEM 544
Query: 141 SCDSGGSDDWVKYVNLVNIYITASHLVNA-ESSTLVEAEKSITQRQWITYDFLIILYAGL 199
+ G + + V Y L++ Y+ A + A E + +E + +TY LI +
Sbjct: 545 R-EVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLP--NIVTYSALIDGHCKA 601
Query: 200 GNKDKIDQIWKSLRMTKQK 218
G +K QI++ RM K
Sbjct: 602 GQVEKACQIFE--RMCGSK 618
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 44/94 (46%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
YT ++ T++A +L + +++ N + Y M+ + +G++E ++E +
Sbjct: 747 YTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMG 806
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
K V P+ TY + I C +D L+EM
Sbjct: 807 SKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM 840
>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
Length = 946
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 112/286 (39%), Gaps = 55/286 (19%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVK 71
Y +D K I ++F + T TYTAL+H Y AK A ELFE +
Sbjct: 480 YTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETML 539
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPD----------------IF 115
N + Y+ ++ + GQVEK + E + VPD +
Sbjct: 540 SEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVV 599
Query: 116 TYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES---- 171
TY + + +++ +K LD MS + G + + Y L++ L A+
Sbjct: 600 TYGALLDGFCKSHRVEEARKLLDAMSME-GCEPNQIVYDALIDGLCKVGKLDEAQEVKTE 658
Query: 172 -------------STLVEAEKSITQRQWITYDFL-----------IILYA----GLGNKD 203
S+L++ + +RQ + L +++Y GL
Sbjct: 659 MSEHGFPATLYTYSSLIDRYFKV-KRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVG 717
Query: 204 KIDQIWKSLRMTKQKMTSRN---YICILSSYLMLGHLKEVGEIIDQ 246
K D+ +K ++M ++K N Y ++ + M+G ++ E++++
Sbjct: 718 KTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLER 763
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 73/139 (52%), Gaps = 8/139 (5%)
Query: 82 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS-CAATLNIDQVKKFLDEM 140
Y++++ + ++E L+ EE+KR +V D++TY + + S C A L I+Q +K+ +EM
Sbjct: 445 YSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGL-IEQARKWFNEM 503
Query: 141 SCDSGGSDDWVKYVNLVNIYITASHLVNA-ESSTLVEAEKSITQRQWITYDFLIILYAGL 199
+ G + + V Y L++ Y+ A + A E + +E + +TY LI +
Sbjct: 504 R-EVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLP--NIVTYSALIDGHCKA 560
Query: 200 GNKDKIDQIWKSLRMTKQK 218
G +K QI++ RM K
Sbjct: 561 GQVEKACQIFE--RMCGSK 577
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 44/94 (46%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
YT ++ T++A +L + +++ N + Y M+ + +G++E ++E +
Sbjct: 706 YTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMG 765
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
K V P+ TY + I C +D L+EM
Sbjct: 766 SKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM 799
>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 618
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
E Y+ L+ A E A ELFE++ Q L + + YN M+ + VGQV+ ++ E+
Sbjct: 483 ENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEK 542
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
++ PDI YN + +++V K L +M
Sbjct: 543 MEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKM 578
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 59/313 (18%), Positives = 121/313 (38%), Gaps = 38/313 (12%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVK 71
Y+ ID + KV + FE + + +Y+ L+H + A ++++ LF+ +
Sbjct: 240 YSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMV 299
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
+ + + ++ ++ G+V + ++E + ++ +VP++ TYN I +++
Sbjct: 300 DQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLN 359
Query: 132 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT------ASHLVN--------AESSTLVEA 177
++ M G D + Y L+N Y A +L N +T
Sbjct: 360 SARELFLSMP-SKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTL 418
Query: 178 EKSITQRQWI-----------TY------DFLIILYAGLGNKDKI---DQIWKSLRMTKQ 217
K + Q+ + TY I GL D + +++ L+
Sbjct: 419 LKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNF 478
Query: 218 KMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 277
K+ NY C++ G L+ E+ ++ Q D+ N ++ F VG + AN
Sbjct: 479 KLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQP-DVVTYNIMIHGFCKVGQVDNAN 537
Query: 278 EFHMLLLQKNCAP 290
+ + C P
Sbjct: 538 ILFEKMEENGCTP 550
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 78/181 (43%), Gaps = 2/181 (1%)
Query: 74 NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQV 133
N + Y+ ++ VG+ ++ + EE+K + ++PD+ +Y+ I DQ
Sbjct: 232 NCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQS 291
Query: 134 KKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLI 193
K DEM D G D V + L++ + A+ V ++ I ITY+ LI
Sbjct: 292 KHLFDEMV-DQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVP-NLITYNSLI 349
Query: 194 ILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATS 253
+ +G+ + +++ S+ + +Y +++ Y +KE + ++ Q S
Sbjct: 350 DGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKS 409
Query: 254 D 254
Sbjct: 410 P 410
Score = 41.2 bits (95), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 29/138 (21%), Positives = 68/138 (49%), Gaps = 13/138 (9%)
Query: 7 FVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAE 64
F L+ +Y+ ID + K + + FE L + TY ++H + + A
Sbjct: 478 FKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNAN 537
Query: 65 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 124
LFE+++++ + + + YN ++ + ++E+V ++ ++ +K+V P+ +SC
Sbjct: 538 ILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPN-------AASC 590
Query: 125 AATLNI----DQVKKFLD 138
+++ ++ KKF+D
Sbjct: 591 TIVVDMLCKDEKYKKFVD 608
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 71/152 (46%), Gaps = 2/152 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY+ ++ ++A+ELFE +K + + + Y+ ++ + G+ ++ + +E+
Sbjct: 239 TYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEM 298
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ V PD+ T+++ I + + + KK L+ M G + + Y +L++ +
Sbjct: 299 VDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVM-IQRGIVPNLITYNSLIDGFCMVGD 357
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYA 197
L +A L K + + I+Y LI Y
Sbjct: 358 LNSARELFLSMPSKGLEPDE-ISYTTLINGYC 388
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Query: 62 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 121
+A ELF +K N N Y+ ++ G++E + E++ ++ + PD+ TYN+ I
Sbjct: 465 EAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMI 524
Query: 122 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
+D ++M ++G + D + Y L+ + + L
Sbjct: 525 HGFCKVGQVDNANILFEKME-ENGCTPDIIAYNTLLCGFCEGNKL 568
>gi|115482066|ref|NP_001064626.1| Os10g0421800 [Oryza sativa Japonica Group]
gi|113639235|dbj|BAF26540.1| Os10g0421800, partial [Oryza sativa Japonica Group]
Length = 973
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/206 (18%), Positives = 90/206 (43%), Gaps = 2/206 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L++ + + +A E++ + + + Y+ +M + VE V ++ E+
Sbjct: 197 TYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREM 256
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ V P++++Y + I D+ + L +M + G D + + L+ + A
Sbjct: 257 EAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKME-NEGCKPDVITHTVLIQVLCDAGR 315
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ +A+ + +KS + +TY L+ + G+ + +IW +++ Y
Sbjct: 316 ISDAK-DVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYT 374
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSA 251
++ + +G + E E+ D+ KQ
Sbjct: 375 AVIDALCQVGRVFEALEMFDEMKQKG 400
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 108/239 (45%), Gaps = 13/239 (5%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT ++ + A ++A ++F + ++N + L N ++ G+ ++ + ++
Sbjct: 512 TYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQL 571
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K N+ P TYN ++ + +V L+EM S + + Y +++
Sbjct: 572 KEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMY-HSNYPPNLITYNTILDCLCK--- 627
Query: 166 LVNAESSTLVEAEKSITQRQWIT--YDFLIILYAGLGNKDKIDQIWKSL-RMTKQKMTSR 222
N + ++ S+T + I + ++Y GL +++ ++ + +M K +
Sbjct: 628 --NGAVNDALDMLYSMTTKGCIPDLSSYNTVIY-GLVKEERYNEAFSIFCQMKKVLIPDY 684
Query: 223 NYIC-ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLL-GAFSDVGLTEKANEF 279
+C IL S++ +G +KE II + S D S+C+ L+ G G+ EK+ EF
Sbjct: 685 ATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGI-EKSIEF 742
Score = 40.4 bits (93), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 90/226 (39%), Gaps = 5/226 (2%)
Query: 70 VKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLN 129
+K++ + NA YN ++ + G + V + VVP + TY++ + + +
Sbjct: 186 MKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRD 245
Query: 130 IDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITY 189
++ V L EM G + Y + + A A L + E + IT+
Sbjct: 246 VETVLWLLREMEA-HGVKPNVYSYTICIRVLGQAKRFDEA-YRILAKMENEGCKPDVITH 303
Query: 190 DFLIILYAGLGN-KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK 248
LI + G D D WK ++ + QK YI +L + G + V EI + K
Sbjct: 304 TVLIQVLCDAGRISDAKDVFWK-MKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMK 362
Query: 249 QSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
+D ++ A ++ A VG +A E + QK P S
Sbjct: 363 ADGYND-NVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYS 407
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 54/118 (45%), Gaps = 2/118 (1%)
Query: 52 HLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVV 111
HL K E A EL ++ K +S +YN ++ + ++ + E+K
Sbjct: 764 HLCKQKKALE-AHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCG 822
Query: 112 PDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 169
PD FTYNL + + ++ I+++ K +EM G +V Y +++ + + L A
Sbjct: 823 PDEFTYNLLLDAMGKSMRIEEMLKVQEEMH-RKGYESTYVTYNTIISGLVKSRRLEQA 879
>gi|356542070|ref|XP_003539494.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Glycine max]
Length = 729
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 101/228 (44%), Gaps = 12/228 (5%)
Query: 71 KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 130
K L+ N + Y ++ Y +VE+ +V+EE+ + + P++ TYN + +
Sbjct: 283 KCEGLNPNVVTYTTLIRGYCMKQEVEEALVVLEEMTSRGLKPNMITYNTLVKGLCEAHKL 342
Query: 131 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT-QRQWITY 189
D++K L+ M D G S D + +++++ A +L E+ + E+ K +Y
Sbjct: 343 DKMKDVLERMKSDGGFSPDTFTFNTIIHLHCCAGNL--DEALKVFESMKKFRIPADSASY 400
Query: 190 DFLIILYAGLGNKDKIDQIW-----KSLRMTK--QKMTSRNYICILSSYLMLGHLKEVGE 242
LI G+ D +Q++ K + ++K K + +Y I S G K+
Sbjct: 401 STLIRSLCQKGDYDMAEQLFDELFEKEILLSKFGSKPLAASYNPIFESLCEHGKTKKAER 460
Query: 243 IIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
+I Q + T D S ++G + G E E M +L+++ P
Sbjct: 461 VIRQLMKRGTQDPQ-SYTTVIMGHCKE-GAYESGYELLMWMLRRDFLP 506
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 58/116 (50%), Gaps = 8/116 (6%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE-I 105
+ +L+ YA A +++ +LF+ +K +S + + +N +M++ + G+ V +E +
Sbjct: 151 FNSLIRSYAEAGLFKESMKLFQTMKSIAVSPSVVTFNSLMSILLKRGRTNMAKEVYDEML 210
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM---SCDSGGSDDWVKYVNLVN 158
V PD TYN+ I +D+ +F EM +CD+ D V Y LV+
Sbjct: 211 GTYGVSPDTCTYNVLIRGFCKNSMVDEGFRFFREMESFNCDA----DVVTYNTLVD 262
>gi|356533844|ref|XP_003535468.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g23020-like [Glycine max]
Length = 813
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 101/233 (43%), Gaps = 5/233 (2%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
S TY L+ Y A ++A E F ++ + ++ + +N M+ + + GQ+E+V+L+V
Sbjct: 273 SHTYNTLIDTYGKAGQLKEASETFAKMLKQGVAPTTVTFNTMINICGNHGQLEEVSLLVR 332
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
+++ P+ TYN+ IS A +I K+ + M ++ D V Y L+ Y
Sbjct: 333 KMEELRCSPNTRTYNILISLYAKHDDIGMATKYFEIMK-EACLEPDLVSYRTLLYAYSIR 391
Query: 164 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 223
+ AE E+ + Q+ T L +Y G D+ +W MTS
Sbjct: 392 KMVGEAEELVKEMDERRLEIDQY-TQSALTRMYIKAGMLDQ-SLLWFLRFHVAGNMTSEC 449
Query: 224 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
Y + +Y GH E E + W Q + + N ++ A+ EKA
Sbjct: 450 YAASIDAYGEHGHTLE-AEKVFIWSQK-QKNLSVLEFNVMIKAYGIGKCYEKA 500
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 96/208 (46%), Gaps = 2/208 (0%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
+ ++ Y K EKA +LF+ ++Q + + Y ++ + + Q +++++
Sbjct: 484 FNVMIKAYGIGKCYEKACQLFDSMEQHGVVADRCSYTSLIQILTTSDQPHMAKPYLKKMQ 543
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
+V D Y + I S A ++ + EM G D + Y L+N++ A +
Sbjct: 544 EAGLVSDCIPYCVVICSFAKLGQLEMAEDIYWEM-IRHGVQPDVIVYSILINVFSDAGRV 602
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 226
A S + E +K+ + Y+ LI LYA + N +K + +K L+++++ + C
Sbjct: 603 KEA-ISYVDEMKKAGLPGNTVIYNSLIKLYAKIDNLEKAQEAYKLLQLSEEGPNVYSSNC 661
Query: 227 ILSSYLMLGHLKEVGEIIDQWKQSATSD 254
++ Y+ + + +I D K++ ++
Sbjct: 662 MIDLYVKQSMVGQAKQIFDTLKKNGGAN 689
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 50/254 (19%), Positives = 108/254 (42%), Gaps = 39/254 (15%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+YT+L+ + + A+ ++++++ L + + Y ++ + +GQ+E + E+
Sbjct: 518 SYTSLIQILTTSDQPHMAKPYLKKMQEAGLVSDCIPYCVVICSFAKLGQLEMAEDIYWEM 577
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
R V PD+ Y++ I+ + + + ++DEM +G + V Y +L+ +Y +
Sbjct: 578 IRHGVQPDVIVYSILINVFSDAGRVKEAISYVDEMK-KAGLPGNTVIYNSLIKLYAKIDN 636
Query: 166 LVNAESS--------------------TLVEAEKSITQRQWI-------------TYDFL 192
L A+ + L + + Q + I T+ +
Sbjct: 637 LEKAQEAYKLLQLSEEGPNVYSSNCMIDLYVKQSMVGQAKQIFDTLKKNGGANEFTFAMM 696
Query: 193 IILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSAT 252
+ LY + D+ QI K +R +T +Y +L Y + G KE I+ +K+
Sbjct: 697 LCLYKKIERFDEAIQIAKQIRKLG-PLTELSYNNVLDLYAIAGRPKEA---IETFKEMVR 752
Query: 253 SDFDISACN-RLLG 265
+ ++ C+ R LG
Sbjct: 753 ASIQVNDCSLRSLG 766
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 53/117 (45%), Gaps = 20/117 (17%)
Query: 46 TYTALLHLYAGAKWTEKAEELF-----------------ERVKQSNLSFNALMYNEMMTL 88
T ++ LY A +KAEE F ERV +N SF + YN ++
Sbjct: 223 TMVIVVQLYKKAGEFQKAEEFFKKWSLGNDNAMATLELDERVVCANASFGSHTYNTLIDT 282
Query: 89 YMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVK---KFLDEMSC 142
Y GQ+++ + ++ ++ V P T+N I+ C +++V + ++E+ C
Sbjct: 283 YGKAGQLKEASETFAKMLKQGVAPTTVTFNTMINICGNHGQLEEVSLLVRKMEELRC 339
>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 840
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 108/256 (42%), Gaps = 15/256 (5%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
+ T T+ +L++ + + +A L + +K L NA+ Y +M +Y G ++ +
Sbjct: 558 SPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLE 617
Query: 101 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
++ E+K K + P TY + I + + + L++M G + D V Y ++ +
Sbjct: 618 LLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDA-VGLTPDQVSYNTIIQAF 676
Query: 161 ITASHLVNA----ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 216
A + A + L E + +TY+ LI + G+ D + SL+ K
Sbjct: 677 CKARDMRKAFQLYDKMLLHNLEPT-----SVTYNILINGFCVYGDLKDADNLLVSLQNRK 731
Query: 217 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN--RLLGAFSDVGLTE 274
+ Y I+ ++ G +V + + ++Q F++S + ++G L
Sbjct: 732 VNLNKYAYTTIIKAHCAKG---DVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVT 788
Query: 275 KANEFHMLLLQKNCAP 290
+A F ++L P
Sbjct: 789 EAKYFFCMMLSDGVCP 804
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Query: 62 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 121
+A F+ + SNLS + ++YN M+ Y+ G + + +++ K + P I T+N +
Sbjct: 509 QARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLM 568
Query: 122 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
+ Q ++ LD + G + V Y L+N+Y
Sbjct: 569 YGFCINRKLSQARRLLDTIKL-HGLEPNAVTYTTLMNVY 606
>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 2/148 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT L+ Y + EKA L ++ QS L+ N + Y + +GQV+ ++ E+
Sbjct: 152 TYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEM 211
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K + +I TYN ++ + NI Q K ++EM +G D + + L++ Y
Sbjct: 212 CGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEV-AGMYPDTITFTTLMDAYCKTGE 270
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLI 193
+V A L E Q IT++ L+
Sbjct: 271 MVKAH-ELLREMLDRGLQPTVITFNVLM 297
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 90/208 (43%), Gaps = 7/208 (3%)
Query: 82 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 141
Y+ ++ Y G+++KV +++E++ K + P+++TYN I + +D ++ L EM
Sbjct: 13 YSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREMI 72
Query: 142 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 201
+ G D V Y L++ + + + A E EK +I Y +I G
Sbjct: 73 -NQGIVPDTVVYTTLIDGFCKLGN-IQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGK 130
Query: 202 KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 261
+ D+++ + + Y ++ Y G +++ + +Q QS + ++
Sbjct: 131 MMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTP-NVVTYT 189
Query: 262 RLLGAFSDVGLTEKANEFHMLLLQKNCA 289
L +G + ANE LL + C
Sbjct: 190 ALADGLCKLGQVDTANE----LLHEMCG 213
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 52/280 (18%), Positives = 102/280 (36%), Gaps = 36/280 (12%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+Y+ +++ Y +K +L + ++ L N YN ++ L G+V+ V+ E+
Sbjct: 12 SYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREM 71
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS------------------CDSGG- 146
+ +VPD Y I NI K DEM C G
Sbjct: 72 INQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKM 131
Query: 147 ---------------SDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 191
D V Y L++ Y + + A S + +T +TY
Sbjct: 132 MEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTP-NVVTYTA 190
Query: 192 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 251
L LG D +++ + ++ Y +++ G++++ +++++ + +
Sbjct: 191 LADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAG 250
Query: 252 TSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 291
D L+ A+ G KA+E +L + PT
Sbjct: 251 MYP-DTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPT 289
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 46/236 (19%), Positives = 98/236 (41%), Gaps = 5/236 (2%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVK 71
Y T ID K+ I + + F+ + + YTA++ +A+++F ++
Sbjct: 83 YTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMF 142
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
+ + + Y ++ Y G++EK + ++ + + P++ TY +D
Sbjct: 143 SRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVD 202
Query: 132 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 191
+ L EM C G + Y +LVN + ++ A + E E + IT+
Sbjct: 203 TANELLHEM-CGKGLQLNICTYNSLVNGLCKSGNIRQA-VKLMEEMEVAGMYPDTITFTT 260
Query: 192 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQW 247
L+ Y G K ++ + + + T + +++ + M G L++ GE + W
Sbjct: 261 LMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLED-GERLLAW 315
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 88/219 (40%), Gaps = 15/219 (6%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYTAL + A EL + L N YN ++ G + + ++EE+
Sbjct: 187 TYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEM 246
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ + PD T+ + + T + + + L EM D G + + L+N + +
Sbjct: 247 EVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREML-DRGLQPTVITFNVLMNGFCMSGM 305
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
L + E EK I TY+ L+ Y N +I+K M +R +
Sbjct: 306 LEDGERLLAWMLEKGIMP-NTTTYNSLMKQYCIRNNMRCTTEIYKG-------MCARGVM 357
Query: 226 CILSSY--LMLGHLKEVGEIIDQW---KQSATSDFDISA 259
++Y L+ GH K + + W K+ A F+++A
Sbjct: 358 PDSNTYNILIKGHCK-ARNMKEAWFLHKEMAEKGFNLTA 395
>gi|449479164|ref|XP_004155523.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 201
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 193 IILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSAT 252
+ LYA +GNKD++ ++W +L QK + Y+CI+SS + L + I+ +W+ T
Sbjct: 1 MTLYAAIGNKDEVYRVW-NLYTNLQKRFNSGYLCIISSLMKLDDIDGAERILKEWESGDT 59
Query: 253 SDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
S FD N ++ ++ G +KA + L++ P
Sbjct: 60 S-FDFKIPNMMINSYCTKGFVDKAEAYISRLIENGKEP 96
>gi|357520891|ref|XP_003630734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524756|gb|AET05210.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 520
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 68/167 (40%), Gaps = 2/167 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
Y LL ++A + + + +A Y+ + Y V V++++
Sbjct: 250 AYNNLLEALCKGGHVDEAMDFLNDMLSKKVEPDAFTYSIFIRSYCDANNVHSAFGVLDKM 309
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+R N++P++FTYN I +++ + LDEM D W N + Y
Sbjct: 310 RRCNLLPNVFTYNCIIKRLCKIKKVEEAYQLLDEMISSGLKPDTWS--YNAIQAYHCDHC 367
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 212
VN + EK + TY+ ++ L +G DK ++W+ +
Sbjct: 368 EVNRALKLISRMEKDVCFPDRHTYNMVLKLLIRIGRFDKATEVWECM 414
>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 109/258 (42%), Gaps = 30/258 (11%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+ L+ A E+A LFE + NL + + + ++ GQVE +++ +
Sbjct: 569 TFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLM 628
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
V P++ TYN + + I++ +FL+EM SG D + Y +LV AS
Sbjct: 629 GNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMV-SSGCVPDSITYGSLVYALCRASR 687
Query: 166 LVNAESSTLVEAEKSIT-QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK-----QKM 219
+A LV KS +TY+ L +D +WKS + + ++M
Sbjct: 688 TDDALQ--LVSELKSFGWDPDTVTYNIL------------VDGLWKSGQTEQAITVLEEM 733
Query: 220 TSRNYICILSSY-LMLGHLKEVGEIIDQWKQSATSDFDISAC--------NRLLGAFSDV 270
+ + + +Y ++ L + G++ + + +S C + L+ V
Sbjct: 734 VGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKV 793
Query: 271 GLTEKANEFHMLLLQKNC 288
G ++A E +++K+C
Sbjct: 794 GRIDEARELIQEMMRKSC 811
Score = 44.7 bits (104), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 48/98 (48%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
S TY +L++ A T+ A +L +K + + YN ++ GQ E+ V+E
Sbjct: 672 SITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLE 731
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 141
E+ K PD+ TYN I S ++++ ++ +MS
Sbjct: 732 EMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMS 769
Score = 43.9 bits (102), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 57/124 (45%), Gaps = 6/124 (4%)
Query: 23 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 82
+ I GE +G+ A T TY +++ + ELFE + + + + Y
Sbjct: 198 RALEIFRGEMARDGV---APTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTY 254
Query: 83 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM-- 140
N ++ G +E+ + ++ ++ VP++ TY++ I+ ID+ ++ + EM
Sbjct: 255 NTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTR 314
Query: 141 -SCD 143
SCD
Sbjct: 315 KSCD 318
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 50/254 (19%), Positives = 102/254 (40%), Gaps = 22/254 (8%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNL--SFNALMYNEMMTLYMSVGQVEKVALVVE 103
TY + L T +A EL ++ +L S + + ++ ++ GQ+++ V +
Sbjct: 325 TYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFD 384
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
++ VP++ TYN ++ +++ ++ M D G + D + Y LV+ + A
Sbjct: 385 DMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMV-DKGVTPDVITYSVLVDAFCKA 443
Query: 164 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDK-------IDQIWKSLRMTK 216
S + A A + T +T++ +I GL D+ D + +
Sbjct: 444 SRVDEALELLHGMASRGCTP-NVVTFNSII---DGLCKSDRSGEAFQMFDDMALKHGLVP 499
Query: 217 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
K+T Y ++ G + ++D A D D A N + S +G +A
Sbjct: 500 DKIT---YCTLIDGLFRTGRAGQAEALLD-----AMPDPDTYAFNCCINGLSKLGDVSRA 551
Query: 277 NEFHMLLLQKNCAP 290
+ + +L+ P
Sbjct: 552 LQVYNRMLELELVP 565
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 59/126 (46%), Gaps = 3/126 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNL--SFNALMYNEMMTLYMSVGQVEKVALVVE 103
TY + L +A EL ++ +L S + + ++ ++ GQ ++ V +
Sbjct: 819 TYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFD 878
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
++ VP++ TYN+ ++ T +++ ++ M D G + D + Y LV+ + A
Sbjct: 879 DMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMV-DKGVTPDVITYSVLVDAFCKA 937
Query: 164 SHLVNA 169
SH+ A
Sbjct: 938 SHVDEA 943
Score = 40.4 bits (93), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 20/96 (20%), Positives = 46/96 (47%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T++ L+ T++A +F+ + N + YN +M ++E+ ++E +
Sbjct: 856 TFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESM 915
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 141
K V PD+ TY++ + + ++D+ + L M+
Sbjct: 916 VDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMA 951
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 79/202 (39%), Gaps = 8/202 (3%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTE--KAEELFERVK 71
Y T ID + + E + +P +TY + +K + +A +++ R+
Sbjct: 504 YCTLIDGLFRTGRAGQAEALLDAMP----DPDTYAFNCCINGLSKLGDVSRALQVYNRML 559
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
+ L + + +N ++ G E+ + + EE+ KN+ PD+ T+ I ++
Sbjct: 560 ELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVE 619
Query: 132 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 191
+ LD M + G + V Y LV+ + S + L E S ITY
Sbjct: 620 AARDILDLMG-NLGVPPNVVTYNALVH-GLCKSGRIEEACQFLEEMVSSGCVPDSITYGS 677
Query: 192 LIILYAGLGNKDKIDQIWKSLR 213
L+ D Q+ L+
Sbjct: 678 LVYALCRASRTDDALQLVSELK 699
>gi|357491817|ref|XP_003616196.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355517531|gb|AES99154.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 981
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 108/241 (44%), Gaps = 10/241 (4%)
Query: 38 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 97
PL + S TY L+ LY A + A ++F + +S ++ + +N ++ + S G + +
Sbjct: 287 PLKPRLSTTYNTLIDLYGKAGRLKDAADVFADMMKSGVAMDTCTFNTLIFISGSHGNLLE 346
Query: 98 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 157
++++++ + + + TYN+++S A +ID + + + G D V Y L+
Sbjct: 347 AESLLDKMEERGISSNTRTYNIFLSLYATAGSIDAALSYYRRIR-EVGLFPDTVTYRALL 405
Query: 158 NIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 217
T ++V A + E EK+ ++ ++ +Y G+ DK + + ++
Sbjct: 406 GALCT-ENMVQAVEGVIDEMEKNSVSLDALSLSGIVKMYINEGDVDKANDLL------QK 458
Query: 218 KMTSRNYIC--ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEK 275
++IC I+ ++ G E I + + A DI N ++ A+ +K
Sbjct: 459 YGEPPSFICAAIIDAFAEKGFWAEAENIFYRKRDKARQARDILEFNVMIKAYGKANHYDK 518
Query: 276 A 276
A
Sbjct: 519 A 519
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 102/234 (43%), Gaps = 14/234 (5%)
Query: 49 ALLHLYAGAKWTEKAEELFERVK-QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKR 107
A++ +A + +AE +F R + ++ + + L +N M+ Y +K L+ EE+K
Sbjct: 469 AIIDAFAEKGFWAEAENIFYRKRDKARQARDILEFNVMIKAYGKANHYDKAVLLFEEMKY 528
Query: 108 KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLV 167
+ + P TYN I + +DQ + EM + G + ++ Y L
Sbjct: 529 QGISPADSTYNSIIQMLSGADLVDQARDLTVEMQ-EMGFKPHCQTFSAVIGCYARLGQLS 587
Query: 168 NAESSTLVEAE--KSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+A +V E + + Y LI G ++D+ + + ++ S N +
Sbjct: 588 DA---VIVYQEMISAGVKPNETVYGALI---NGFAEHGRLDEALQYFHLMQESGLSANLV 641
Query: 226 C---ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
++ SY G LK V I Q Q+ D++A + ++ AF+++GL +A
Sbjct: 642 VLTTLMKSYSKAGDLKGVKSIYKQM-QNMEGVLDLAARSSMITAFAELGLVSEA 694
Score = 43.9 bits (102), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 65/150 (43%), Gaps = 3/150 (2%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLS--AKTSETYTALLHLYAGAKWTEKAEELFERVK 71
Y T IDL K + F + S A + T+ L+ + +AE L ++++
Sbjct: 296 YNTLIDLYGKAGRLKDAADVFADMMKSGVAMDTCTFNTLIFISGSHGNLLEAESLLDKME 355
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
+ +S N YN ++LY + G ++ I+ + PD TY + + +
Sbjct: 356 ERGISSNTRTYNIFLSLYATAGSIDAALSYYRRIREVGLFPDTVTYRALLGALCTENMVQ 415
Query: 132 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 161
V+ +DEM +S S D + +V +YI
Sbjct: 416 AVEGVIDEMEKNS-VSLDALSLSGIVKMYI 444
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 51/254 (20%), Positives = 108/254 (42%), Gaps = 13/254 (5%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY +++ + +GA ++A +L +++ + ++ ++ Y +GQ+ +V +E+
Sbjct: 537 TYNSIIQMLSGADLVDQARDLTVEMQEMGFKPHCQTFSAVIGCYARLGQLSDAVIVYQEM 596
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
V P+ Y I+ A +D+ ++ M +SG S + V L+ Y A
Sbjct: 597 ISAGVKPNETVYGALINGFAEHGRLDEALQYFHLMQ-ESGLSANLVVLTTLMKSYSKAGD 655
Query: 166 LVNAES----STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 221
L +S +E + R +I +A LG + ++ + T Q S
Sbjct: 656 LKGVKSIYKQMQNMEGVLDLAARSS-----MITAFAELGLVSEAKLTFEKFKETGQA-DS 709
Query: 222 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE-FH 280
+Y ++ Y +G + E +I ++ K S D + NR+L ++ K E +
Sbjct: 710 TSYGIMMYVYKDIGMIDEAIKIAEEMKISGLLR-DCVSYNRVLTCYAINRQFHKCGELLY 768
Query: 281 MLLLQKNCAPTNAS 294
+++ K P + +
Sbjct: 769 EMIVSKKLLPDDGT 782
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 61/140 (43%), Gaps = 12/140 (8%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKV-FGIHSGER----YFEGLPLSAKTSETYTALLHLYA 55
M+ K+ + D ++ K F + + E+ Y EG P +++ TYTAL L
Sbjct: 770 MIVSKKLLPDDGTLIVLFTILKKAEFPVEAAEQLELCYQEGKPYASQA--TYTALYSLLG 827
Query: 56 GAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIF 115
K F + NL +A YN + Y S G VEK + +++ K+V PDI
Sbjct: 828 MHTLALK----FAQTVLENLDSSA-AYNVAIYAYASAGDVEKALNIHMKMRDKHVEPDIV 882
Query: 116 TYNLWISSCAATLNIDQVKK 135
TY + ++ VKK
Sbjct: 883 TYINLVGCYGKAGMVEGVKK 902
>gi|218193742|gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indica Group]
Length = 1874
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 54/102 (52%), Gaps = 3/102 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT L+H A T +A + F+++K+ ++ +A YN ++ + G++E VVEE+
Sbjct: 1662 TYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEM 1721
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFL---DEMSCDS 144
+ + P++ T+N IS+ + K L +E SC+
Sbjct: 1722 RTTGIAPNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNP 1763
Score = 40.4 bits (93), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 31/155 (20%), Positives = 69/155 (44%), Gaps = 2/155 (1%)
Query: 18 IDLMTKVFGIHSGERYFEGLPLSAKTSE-TYTALLHLYAGAKWTEKAEELFERVKQSNLS 76
+D + K + F+ L + E ++ L+H + A+ ++A + E +KQ S
Sbjct: 1563 LDTLCKERSVKRARGVFQELRGTIPPDENSFNTLVHGWCKARMLKEALDTMEEMKQHGFS 1622
Query: 77 FNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKF 136
+ + Y ++ Y + V +++E++++ P++ TY + + + +
Sbjct: 1623 PSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTILMHALGKAGRTREALDT 1682
Query: 137 LDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES 171
D++ D G + D Y +L+ I A L +A S
Sbjct: 1683 FDKLKED-GVAPDASFYNSLIYILGRAGRLEDAYS 1716
>gi|359481811|ref|XP_002278330.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Vitis vinifera]
Length = 848
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 82/190 (43%), Gaps = 2/190 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+T ++HLY+ E + F + L N + YN ++ Y S G ++ V EI
Sbjct: 341 TFTTIIHLYSVCGQIENCQTAFNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEI 400
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K+ PD+ +Y +++ + ++ K + M + + V Y L++ Y +
Sbjct: 401 KKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELMR-RNHCKPNLVSYNALIDAYGSKGL 459
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
L A L E E++ Q ++ L+ G K KI + + + K+ + Y
Sbjct: 460 LTEA-VEILHEMERNGVQPNIVSICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYN 518
Query: 226 CILSSYLMLG 235
+ SYL +G
Sbjct: 519 SAIGSYLSVG 528
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 85/201 (42%), Gaps = 2/201 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+Y AL+ YA ++A +F +K++ + + Y ++ Y G+ EK V E +
Sbjct: 376 SYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELM 435
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+R + P++ +YN I + + + + + L EM +G + V L+
Sbjct: 436 RRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEME-RNGVQPNIVSICTLLAACGRCGQ 494
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
V + S L AE + Y+ I Y +G DK +++++R K K Y
Sbjct: 495 KVKIK-SVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKVKPDPVTYN 553
Query: 226 CILSSYLMLGHLKEVGEIIDQ 246
++S + E +D+
Sbjct: 554 VLISGCCKMSKYGEALGFLDE 574
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 33/66 (50%)
Query: 75 LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVK 134
+ N YN + Y+SVG+ +K + ++ K V PD TYN+ IS C +
Sbjct: 510 IKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEAL 569
Query: 135 KFLDEM 140
FLDEM
Sbjct: 570 GFLDEM 575
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 57/290 (19%), Positives = 123/290 (42%), Gaps = 16/290 (5%)
Query: 13 DYATRIDLMTKVFGIHSGER--------YFEGLPLSAKT-SETYTALLHLYAGAKWTEKA 63
+Y R D+ + +H+ +FE K +ETY AL++ + A A
Sbjct: 157 NYCARNDIYNMMIRLHARHNIVDQARGLFFEMQKWRCKPDAETYNALINAHGRAGQWRWA 216
Query: 64 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 123
+ + + ++ + + YN ++ S G ++ V +++ V PD+ T+N+ +S+
Sbjct: 217 MNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIVLSA 276
Query: 124 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTL---VEAEKS 180
+V + + M + D +N+V IY N ++ + ++ ++S
Sbjct: 277 YKRGNQYSKVLSYFELMKGTNIRPD--TTTLNIV-IYCLVKLGQNGKAIDIFNSMKEKRS 333
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 240
+T+ +I LY+ G + + ++ K +Y ++ +Y G KE
Sbjct: 334 ECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAEGLKPNIVSYNALIGAYASHGMDKEA 393
Query: 241 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
+ ++ K++ D+ + LL A+ G EKA + L+ + +C P
Sbjct: 394 FSVFNEIKKNGFHP-DVVSYTSLLNAYGKSGKPEKAMKVFELMRRNHCKP 442
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
Query: 9 LSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEEL 66
LS Y++ I +K + E F + + + TYTA++H Y A+ EKA L
Sbjct: 582 LSKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIHAYDVAENWEKASAL 641
Query: 67 FERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCA 125
F ++ ++ +++ + +M + GQ KV ++ E ++ K + + ++ +S+C+
Sbjct: 642 FLEMETDDVQPDSIACSSLMRAFNKGGQPAKVLVLAEFMREKKIPFNNSSFFEMVSACS 700
>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62680, mitochondrial; Flags: Precursor
gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 86/172 (50%), Gaps = 12/172 (6%)
Query: 46 TYTALLH-LYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
TYTAL++ L ++W++ A L + +K+ ++ N + Y+ ++ ++ G+V + + EE
Sbjct: 227 TYTALVNGLCNSSRWSDAARLLSDMIKK-KITPNVITYSALLDAFVKNGKVLEAKELFEE 285
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+ R ++ PDI TY+ I+ ID+ + D M G D V Y L+N + A
Sbjct: 286 MVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV-SKGCLADVVSYNTLINGFCKAK 344
Query: 165 HLVNAESSTLVEAEKSITQR----QWITYDFLIILYAGLGNKDKIDQIWKSL 212
+ + ++ + ++QR +TY+ LI + G+ DK + + +
Sbjct: 345 RVEDG-----MKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 391
Score = 44.3 bits (103), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 38/78 (48%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+Y L++ + AK E +LF + Q L N + YN ++ + G V+K ++
Sbjct: 332 SYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 391
Query: 106 KRKNVVPDIFTYNLWISS 123
+ PDI+TYN+ +
Sbjct: 392 DFFGISPDIWTYNILLGG 409
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 92/236 (38%), Gaps = 15/236 (6%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y A++ K A + F+ +++ + N + Y ++ + + A ++ ++
Sbjct: 193 YNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMI 252
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE---MSCDSGGSDDWVKYVNLVNIYITA 163
+K + P++ TY+ + + + + K+ +E MS D D V Y +L+N
Sbjct: 253 KKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP----DIVTYSSLINGLCLH 308
Query: 164 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 223
+ A + K ++Y+ LI G +++ K R Q+ N
Sbjct: 309 DRIDEANQMFDLMVSKGCLA-DVVSYNTLI---NGFCKAKRVEDGMKLFREMSQRGLVSN 364
Query: 224 ---YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
Y ++ + G + + E Q S DI N LLG D G EKA
Sbjct: 365 TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISP-DIWTYNILLGGLCDNGELEKA 419
>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Cucumis sativus]
Length = 749
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 124/284 (43%), Gaps = 20/284 (7%)
Query: 15 ATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEK-AEELFERVKQS 73
R++L+ K I + + + +P +Y A+L K + K AE +F+ + +S
Sbjct: 142 CARVNLINKALSIVNLAKSYGFMP----GVLSYNAILDAVIRTKQSVKIAEGIFKEMVES 197
Query: 74 NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQV 133
+S N YN ++ + + G +E E++R +P++ TYN I + I +
Sbjct: 198 GVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEA 257
Query: 134 KKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQW----ITY 189
K L M+ G + + + Y ++N + E+S ++E +++R++ +T+
Sbjct: 258 FKLLRLMAL-KGLNPNLISYNVVINGLCREGQM--KETSEILE---EMSKRRYVPDRVTF 311
Query: 190 DFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR--NYICILSSYLMLGHLKEVGEIIDQW 247
+ LI Y +GN + + M K ++ Y +++S G+L E +DQ
Sbjct: 312 NTLINGYCNVGNFHQ--ALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQM 369
Query: 248 KQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 291
+ + L+ FS G ++A + +++ PT
Sbjct: 370 RDRGLHP-NGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPT 412
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 106/249 (42%), Gaps = 3/249 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY ++ Y + +A +L + L+ N + YN ++ GQ+++ + ++EE+
Sbjct: 240 TYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEM 299
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
++ VPD T+N I+ N Q EM +G S + V Y L+N A +
Sbjct: 300 SKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEM-VKNGLSPNVVTYTTLINSMCKAGN 358
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
L N L + TY LI ++ G + QI K + T Y
Sbjct: 359 L-NRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYN 417
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 285
+++ + +LG +++ ++ + + D+ + + ++ F EKA + + ++
Sbjct: 418 ALINGHCILGRMEDASGLLQEMIERGFIP-DVVSYSTIISGFCRNQELEKAFQLKVEMVA 476
Query: 286 KNCAPTNAS 294
K +P A+
Sbjct: 477 KGISPDVAT 485
Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 52/264 (19%), Positives = 104/264 (39%), Gaps = 26/264 (9%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY AL++ + E A L + + + + + Y+ +++ + ++EK + E+
Sbjct: 415 TYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEM 474
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K + PD+ TY+ I + +V EM G D V Y +L+N Y
Sbjct: 475 VAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEM-LSLGLPPDEVTYTSLINAYCIEGD 533
Query: 166 LVNAESSTLVEAEKSITQRQW----ITYDFLI--------------ILYAGLGNKDKIDQ 207
L A + + Q+ + +TY+ LI +L L + ++
Sbjct: 534 LDKA-----LRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNE 588
Query: 208 I-WKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGA 266
I + +L + ++ + ++ + M G + E +++ Q + N ++
Sbjct: 589 ITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYK-LNEEVYNVIIHG 647
Query: 267 FSDVGLTEKANEFHMLLLQKNCAP 290
S VG EKA + +L AP
Sbjct: 648 HSKVGNIEKAYNLYKEMLHSGFAP 671
>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 87/206 (42%), Gaps = 8/206 (3%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
A + TY ++ E + LF ++++ LS + + YN ++ Y VG +E+VA
Sbjct: 286 APSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVAS 345
Query: 101 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
+ E+K VPDI TYN I+ + + ++ EM ++G + V Y L++ +
Sbjct: 346 LFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMK-NNGLKPNVVTYSTLIDAF 404
Query: 161 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ--- 217
+ A V+ ++ TY LI GN + + WK L Q
Sbjct: 405 CKEGMMQGA-IKLFVDMRRTGLLPNEFTYTSLIDANCKAGN---LTEAWKLLNDMLQAGV 460
Query: 218 KMTSRNYICILSSYLMLGHLKEVGEI 243
K+ Y +L G + E E+
Sbjct: 461 KLNIVTYTALLDGLCKAGRMIEAEEV 486
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/259 (19%), Positives = 101/259 (38%), Gaps = 7/259 (2%)
Query: 32 RYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMS 91
R F LP + + LLH + + + + F + + ++ + YN M+
Sbjct: 246 RNFRTLP----KARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCK 301
Query: 92 VGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWV 151
G +E + +++ + PD+ TYN I ++++V +EM D G D +
Sbjct: 302 EGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMK-DVGCVPDII 360
Query: 152 KYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKS 211
Y L+N Y + A E + + + +TY LI + G +++
Sbjct: 361 TYNGLINCYCKFEKMPRA-FEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVD 419
Query: 212 LRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 271
+R T Y ++ + G+L E ++++ Q+ +I LL G
Sbjct: 420 MRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVK-LNIVTYTALLDGLCKAG 478
Query: 272 LTEKANEFHMLLLQKNCAP 290
+A E +L+ +P
Sbjct: 479 RMIEAEEVFRSMLKDGISP 497
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 104/253 (41%), Gaps = 9/253 (3%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
+ + YTAL+H Y A+ E A ++ +++ + N+ + ++Y ++ + S ++E+ L
Sbjct: 496 SPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKL 555
Query: 101 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
++EE+K + + + I + F EM D G V Y L++
Sbjct: 556 ILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQ-DVGVEATIVTYCVLIDGL 614
Query: 161 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL-RMTKQKM 219
A +V Q Y LI GL + I+ K M + M
Sbjct: 615 CKAG-IVELAVDYFCRMLSLGLQPNVAVYTSLI---DGLCKNNCIESAKKLFDEMQCRGM 670
Query: 220 TS--RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 277
T + ++ L G+L+E +I + + A +FD+ L+ FS G +A
Sbjct: 671 TPDITAFTALIDGNLKHGNLQEALVLISRMTELAI-EFDLHVYTSLVSGFSQCGELHQAR 729
Query: 278 EFHMLLLQKNCAP 290
+F +++K P
Sbjct: 730 KFFNEMIEKGILP 742
>gi|224083253|ref|XP_002306972.1| predicted protein [Populus trichocarpa]
gi|222856421|gb|EEE93968.1| predicted protein [Populus trichocarpa]
Length = 709
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 99/238 (41%), Gaps = 7/238 (2%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
+ +TY+ L+ Y A E A + + ++ SN+ NA +++ +++ Y G+ +K
Sbjct: 372 SPNEQTYSFLIDAYGNAGRWESARIVLKEMEASNVQPNAYVFSRILSSYRDKGEWQKSFQ 431
Query: 101 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
V+ E++ V PD YN+ I + +D D M G D V + L++ +
Sbjct: 432 VLREMENSGVRPDRVFYNVMIDTFGKFNCLDHAMATFDRM-LSEGIEPDTVTWNTLIDCH 490
Query: 161 ITASHLVNAES--STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQK 218
A AE ++E S T++ +I + D + + +R
Sbjct: 491 CRAGKHDRAEELFEEMMEGGYSPCN---TTFNIMINSFGDQERWDDVKNLLAHMRSQGLV 547
Query: 219 MTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
S Y ++ Y G + E +D K + + N L+ A++ GL+E+A
Sbjct: 548 PNSVTYTTLIDIYGKSGRFNDAIECLDDMKAAGLKP-SSTMYNALINAYAQRGLSEQA 604
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 54/117 (46%), Gaps = 1/117 (0%)
Query: 35 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 94
+G LS KT+ T A++ T +AE +FE ++ + L YN ++ Y+ G
Sbjct: 297 QGSGLSVKTA-TLVAVIWALGNCGRTVEAEAIFEEMRDNGLKPRTRAYNALLRGYVKAGL 355
Query: 95 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWV 151
++ VV E++R V P+ TY+ I + + + L EM + + +V
Sbjct: 356 LKDAEFVVSEMERSGVSPNEQTYSFLIDAYGNAGRWESARIVLKEMEASNVQPNAYV 412
>gi|168052517|ref|XP_001778696.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669911|gb|EDQ56489.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 799
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/207 (20%), Positives = 94/207 (45%), Gaps = 4/207 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+Y++LL+ + A + EKA+E+F+ +KQ + N + +N +M Y S G+ E+ ++ ++
Sbjct: 337 SYSSLLNAFGKAGYPEKAQEVFDLMKQRSRKPNLVTFNGLMDAYASAGKYERARELLHDM 396
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN-LVNIYITAS 164
+ P++ T ++CA ++V+ E + V N + YI A
Sbjct: 397 AEARIEPNVVTICSLFAACARARCPEKVRDVFHEAKVRQIALN--VPAFNAAITAYIEAG 454
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
A++ V E+++ + +T+ LI LG+ + ++ + +T
Sbjct: 455 QFDEAKALLEVMEEQNL-RPNGVTFLLLINAAGSLGDYREARTLYDKMVDLGIPLTVEPC 513
Query: 225 ICILSSYLMLGHLKEVGEIIDQWKQSA 251
+++++ G E I D +++
Sbjct: 514 SALINAFAKHGMYNEARTIFDDMRKAG 540
Score = 43.9 bits (102), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 106/248 (42%), Gaps = 4/248 (1%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSN--LSFNALMYNEMMTLYMSVGQVEKVALVV 102
ETY AL++++ A A ++F+ + Q+ ++ + YN ++ S GQ K +
Sbjct: 123 ETYNALMNVHGRAGQWRWALQIFDDMLQAPKPIAPSRSSYNNLINACGSSGQWFKALEIC 182
Query: 103 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 162
+ + V PD+ TYN+ +S+ + + D + D + + ++N
Sbjct: 183 KRMTDNGVGPDLMTYNIILSAFKSGGQPRHAVAYYDHLISKKVPLDRYSHNI-ILNCLTK 241
Query: 163 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 222
+A + + + + +T++ L+ +YA G K + + + T
Sbjct: 242 LGRFEDAINLFKEMRKMNGCEPDVVTFNALLHVYALCGQITKAQETFDMMIGEGMAPTIV 301
Query: 223 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 282
+ +L +Y G E +++ + A + D+ + + LL AF G EKA E L
Sbjct: 302 TFNTLLGAYASQGMYTEALQVVGLLVK-AKFEPDVVSYSSLLNAFGKAGYPEKAQEVFDL 360
Query: 283 LLQKNCAP 290
+ Q++ P
Sbjct: 361 MKQRSRKP 368
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 38/200 (19%), Positives = 85/200 (42%), Gaps = 2/200 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+ ALLH+YA KA+E F+ + ++ + +N ++ Y S G + VV +
Sbjct: 267 TFNALLHVYALCGQITKAQETFDMMIGEGMAPTIVTFNTLLGAYASQGMYTEALQVVGLL 326
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ PD+ +Y+ +++ ++ ++ D M S + V + L++ Y +A
Sbjct: 327 VKAKFEPDVVSYSSLLNAFGKAGYPEKAQEVFDLMKQRS-RKPNLVTFNGLMDAYASAGK 385
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
A AE I + +T L A +K+ ++ ++ + + +
Sbjct: 386 YERARELLHDMAEARI-EPNVVTICSLFAACARARCPEKVRDVFHEAKVRQIALNVPAFN 444
Query: 226 CILSSYLMLGHLKEVGEIID 245
+++Y+ G E +++
Sbjct: 445 AAITAYIEAGQFDEAKALLE 464
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 48/253 (18%), Positives = 108/253 (42%), Gaps = 12/253 (4%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
++ Y ++ L+A + ++A LF +K + YN +M ++ GQ + +
Sbjct: 87 TDIYNCMIWLHARHQRADQARGLFYEMKVWRCKPDVETYNALMNVHGRAGQWRWALQIFD 146
Query: 104 EIKR--KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 161
++ + K + P +YN I++C ++ + + M+ D+G D + Y NI +
Sbjct: 147 DMLQAPKPIAPSRSSYNNLINACGSSGQWFKALEICKRMT-DNGVGPDLMTY----NIIL 201
Query: 162 TASHLVNAESSTLVEAEKSITQRQWI---TYDFLIILYAGLGNKDKIDQIWKSLR-MTKQ 217
+A + + I+++ + +++ ++ LG + ++K +R M
Sbjct: 202 SAFKSGGQPRHAVAYYDHLISKKVPLDRYSHNIILNCLTKLGRFEDAINLFKEMRKMNGC 261
Query: 218 KMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 277
+ + +L Y + G + + E D + I N LLGA++ G+ +A
Sbjct: 262 EPDVVTFNALLHVYALCGQITKAQETFDMMIGEGMAP-TIVTFNTLLGAYASQGMYTEAL 320
Query: 278 EFHMLLLQKNCAP 290
+ LL++ P
Sbjct: 321 QVVGLLVKAKFEP 333
>gi|326493766|dbj|BAJ85345.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 671
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 59/129 (45%), Gaps = 1/129 (0%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQS 73
Y++ I+ +++ + S F+ +P L L A+W E A EL + +
Sbjct: 489 YSSLINGLSEQGLVESAIELFQSMPCKPDIFGYNAVLKGLCRAARW-EDAGELISNMARK 547
Query: 74 NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQV 133
+ N + +N ++ G V++ V E++ + PDIFTYN I+ + +D
Sbjct: 548 DCPPNEITFNILINSLCQKGLVDRAIEVFEQMPKYGSTPDIFTYNALINGFSEQGRLDDA 607
Query: 134 KKFLDEMSC 142
++ L MSC
Sbjct: 608 RRLLSTMSC 616
>gi|224077524|ref|XP_002305285.1| predicted protein [Populus trichocarpa]
gi|222848249|gb|EEE85796.1| predicted protein [Populus trichocarpa]
Length = 523
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 84/192 (43%), Gaps = 11/192 (5%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
Y +LL ++A ++F + + +A Y + Y + V V++ +
Sbjct: 254 AYNSLLEALCKGGNVDEAYKMFREIGSHGVEPDACSYAIFIRAYCEANNIHSVFSVLDRM 313
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
KR ++VP++FTYN I ++ + L EM + G S D Y ++ + S
Sbjct: 314 KRYDLVPNVFTYNCIIKKLCKNGKVEDAYQLLHEMM-ERGVSPDAWSYNTILAYHCEHSE 372
Query: 166 LVNAES-STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
+ A +++ + + R +Y+ L+ L +G D+ +IW+S M R +
Sbjct: 373 VNRATKLISIMVKDNCLPDRH--SYNMLLKLLVRVGRFDRATEIWES-------MGERGF 423
Query: 225 ICILSSYLMLGH 236
+S+Y ++ H
Sbjct: 424 YPSVSTYSVMIH 435
>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 63/118 (53%), Gaps = 1/118 (0%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 102
T +TYT+LLH+ + ++A++LF+++ + +A+M+N ++ + S V+ ++
Sbjct: 430 TKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELL 489
Query: 103 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
+++ R V PD T+N + +++ ++ DEM G D + + L++ Y
Sbjct: 490 KDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMK-RRGIKPDHISFNTLISGY 546
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 63/135 (46%), Gaps = 2/135 (1%)
Query: 33 YFEGLPLSAKTSE-TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMS 91
Y E L K+S T+ ++++ +KA++ ++ S + N + YN ++ Y S
Sbjct: 209 YAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCS 268
Query: 92 VGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWV 151
G+VE ++ +KR+ + PD FTY IS +++ K +EM G V
Sbjct: 269 SGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEM-VQKGLRPSAV 327
Query: 152 KYVNLVNIYITASHL 166
Y L++ + +L
Sbjct: 328 IYNTLIDGFCNKGNL 342
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 45/253 (17%), Positives = 97/253 (38%), Gaps = 38/253 (15%)
Query: 39 LSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV 98
L K+S + L+ ++A E F +K+ + N +++L++ + + E
Sbjct: 146 LGFKSSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAA 205
Query: 99 ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 158
++ E+ R + ++T+N+ I+ + + K F+ M
Sbjct: 206 WVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHM------------------ 247
Query: 159 IYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQK 218
E S + +TY+ ++ Y G + D I +++ K +
Sbjct: 248 -------------------ETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIE 288
Query: 219 MTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 278
S Y ++S G L+E +I ++ Q + N L+ F + G + A+
Sbjct: 289 PDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAV-IYNTLIDGFCNKGNLDMASA 347
Query: 279 FHMLLLQKNCAPT 291
+ +L+K +PT
Sbjct: 348 YKDEMLKKGISPT 360
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/112 (21%), Positives = 48/112 (42%), Gaps = 1/112 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+ ++ + E+A ELF+ +K+ + + + +N +++ Y G ++ V E+
Sbjct: 503 TFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEM 562
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 157
P + TYN + D ++ L EM G + D Y L+
Sbjct: 563 LDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEM-VSKGMTPDDTTYFTLI 613
>gi|356561683|ref|XP_003549109.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 445
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 92/225 (40%), Gaps = 4/225 (1%)
Query: 2 VTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKW 59
V + F L Y T I+ + K + R L + + YT ++H K
Sbjct: 157 VVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKL 216
Query: 60 TEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNL 119
A +L+ + +S N Y ++ + +G +++ ++ E+K KN+ PD++T+N+
Sbjct: 217 LGDACDLYSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNI 276
Query: 120 WISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK 179
I + A ID+ +EM + V Y +L++ HL A + E+
Sbjct: 277 LIDALAKEGKIDEAMSLFEEMK-HKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQ 335
Query: 180 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
I Q +Y L+ G + Q ++ L + + R Y
Sbjct: 336 GI-QPNVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTY 379
>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 105/248 (42%), Gaps = 9/248 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+T L+ +A+++ E + + L YN +M VGQ+E + E +
Sbjct: 253 TFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESL 312
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ + ++F+YN+ I+ ID+ + +EM G V Y L+ +
Sbjct: 313 ADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMR-PKGLKPSTVTYNTLIGALCQSGR 371
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGL---GNKDKIDQIWKSLRMTKQKMTSR 222
+ A+ VE + T Q++ +L GL G+ ++ +++S++ T+ K
Sbjct: 372 VRTAQ-KLFVEMQ---TCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIE 427
Query: 223 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 282
+ +L G L+E + D+ ++ D A N L+ + G+ +A +
Sbjct: 428 VFSILLDGMCRAGKLEEAWKQFDEISKNGLEP-DTIAYNILINGLCNKGMLSEAVKLLWQ 486
Query: 283 LLQKNCAP 290
+ +K C P
Sbjct: 487 MEEKGCLP 494
>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
Length = 600
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 57/113 (50%), Gaps = 1/113 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY ALL A+ L+ER+ ++ S + + YN ++ + VG++++ + +
Sbjct: 87 TYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGA 146
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 158
++ VPD+ TYN I+ +D+ ++ L M +S D V Y +LVN
Sbjct: 147 VKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSES-LVPDVVTYNSLVN 198
Score = 45.1 bits (105), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 48/251 (19%), Positives = 104/251 (41%), Gaps = 10/251 (3%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
TY L+ +A ELF + + L +A+ Y + G+VE L++++
Sbjct: 294 PTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKD 353
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+ K VPD+ ++N I+ +D+ + L M G S + + + L+ A
Sbjct: 354 MDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEA-KGCSPNAISFNTLICGQCRAG 412
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
A +T E K + +TY+ IL GL + +I +++ + +
Sbjct: 413 KWKKA-MTTFKEMLKRGVKPTVVTYN---ILVDGLCKARQEGRIKEAITLFDAMIEKGRV 468
Query: 225 ICILSSYLMLGHLKEVGEIIDQWK-----QSATSDFDISACNRLLGAFSDVGLTEKANEF 279
+++ ++ L + G++ D + ++ ++ N L+ + ++A E
Sbjct: 469 PDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALEL 528
Query: 280 HMLLLQKNCAP 290
+ +++K C P
Sbjct: 529 FVAMVEKGCVP 539
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/113 (18%), Positives = 55/113 (48%), Gaps = 4/113 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY LLH + ++A ++F+ + + + YN ++ + ++++ +++ +
Sbjct: 122 TYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRM 181
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 158
+++VPD+ TYN ++ +D+ + + D G S + + Y L++
Sbjct: 182 VSESLVPDVVTYNSLVNGLCKNGRVDEARMLI----VDKGFSPNVITYSTLIS 230
Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 59/114 (51%), Gaps = 5/114 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY AL++ + A ++A+ + +R+ +L + + YN ++ G+V++ +++ +
Sbjct: 157 TYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARMLIVD- 215
Query: 106 KRKNVVPDIFTYNLWISS-CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 158
K P++ TY+ IS C ++ ++ L++M + G D V Y L++
Sbjct: 216 --KGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLN-GCKPDIVSYNALIH 266
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 63/145 (43%), Gaps = 5/145 (3%)
Query: 63 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 122
A+ +F+ +++ N + YN +++ + G++ + E + + PD+ TYN +
Sbjct: 69 AQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLH 128
Query: 123 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT 182
+D+ K D + G D V Y L+N + A L A+ +S+
Sbjct: 129 GFCKVGKLDEALKIFDG-AVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLV 187
Query: 183 QRQWITYDFLIILYAGLGNKDKIDQ 207
+TY+ L+ GL ++D+
Sbjct: 188 P-DVVTYNSLV---NGLCKNGRVDE 208
>gi|297739653|emb|CBI29835.3| unnamed protein product [Vitis vinifera]
Length = 852
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 82/190 (43%), Gaps = 2/190 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+T ++HLY+ E + F + L N + YN ++ Y S G ++ V EI
Sbjct: 341 TFTTIIHLYSVCGQIENCQTAFNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEI 400
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K+ PD+ +Y +++ + ++ K + M + + V Y L++ Y +
Sbjct: 401 KKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELMR-RNHCKPNLVSYNALIDAYGSKGL 459
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
L A L E E++ Q ++ L+ G K KI + + + K+ + Y
Sbjct: 460 LTEA-VEILHEMERNGVQPNIVSICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYN 518
Query: 226 CILSSYLMLG 235
+ SYL +G
Sbjct: 519 SAIGSYLSVG 528
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 85/201 (42%), Gaps = 2/201 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+Y AL+ YA ++A +F +K++ + + Y ++ Y G+ EK V E +
Sbjct: 376 SYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELM 435
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+R + P++ +YN I + + + + + L EM +G + V L+
Sbjct: 436 RRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEME-RNGVQPNIVSICTLLAACGRCGQ 494
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
V + S L AE + Y+ I Y +G DK +++++R K K Y
Sbjct: 495 KVKIK-SVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKVKPDPVTYN 553
Query: 226 CILSSYLMLGHLKEVGEIIDQ 246
++S + E +D+
Sbjct: 554 VLISGCCKMSKYGEALGFLDE 574
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 33/66 (50%)
Query: 75 LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVK 134
+ N YN + Y+SVG+ +K + ++ K V PD TYN+ IS C +
Sbjct: 510 IKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEAL 569
Query: 135 KFLDEM 140
FLDEM
Sbjct: 570 GFLDEM 575
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 57/290 (19%), Positives = 123/290 (42%), Gaps = 16/290 (5%)
Query: 13 DYATRIDLMTKVFGIHSGER--------YFEGLPLSAKT-SETYTALLHLYAGAKWTEKA 63
+Y R D+ + +H+ +FE K +ETY AL++ + A A
Sbjct: 157 NYCARNDIYNMMIRLHARHNIVDQARGLFFEMQKWRCKPDAETYNALINAHGRAGQWRWA 216
Query: 64 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 123
+ + + ++ + + YN ++ S G ++ V +++ V PD+ T+N+ +S+
Sbjct: 217 MNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIVLSA 276
Query: 124 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTL---VEAEKS 180
+V + + M + D +N+V IY N ++ + ++ ++S
Sbjct: 277 YKRGNQYSKVLSYFELMKGTNIRPD--TTTLNIV-IYCLVKLGQNGKAIDIFNSMKEKRS 333
Query: 181 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 240
+T+ +I LY+ G + + ++ K +Y ++ +Y G KE
Sbjct: 334 ECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAEGLKPNIVSYNALIGAYASHGMDKEA 393
Query: 241 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
+ ++ K++ D+ + LL A+ G EKA + L+ + +C P
Sbjct: 394 FSVFNEIKKNGFHP-DVVSYTSLLNAYGKSGKPEKAMKVFELMRRNHCKP 442
Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
Query: 9 LSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEEL 66
LS Y++ I +K + E F + + + TYTA++H Y A+ EKA L
Sbjct: 582 LSKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIHAYDVAENWEKASAL 641
Query: 67 FERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCA 125
F ++ ++ +++ + +M + GQ KV ++ E ++ K + + ++ +S+C+
Sbjct: 642 FLEMETDDVQPDSIACSSLMRAFNKGGQPAKVLVLAEFMREKKIPFNNSSFFEMVSACS 700
>gi|302781402|ref|XP_002972475.1| hypothetical protein SELMODRAFT_97561 [Selaginella moellendorffii]
gi|300159942|gb|EFJ26561.1| hypothetical protein SELMODRAFT_97561 [Selaginella moellendorffii]
Length = 406
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 82/198 (41%), Gaps = 8/198 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY AL++ + TE EL E + L N ++N MM + G+ E+V + E +
Sbjct: 119 TYAALINGFCKCMDTEVTLELLEEMLARGLRPNLALFNMMMDAHSRSGKHEQVIALFERM 178
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
PD +Y + + + A + ID+ F+ + DS + Y L+N A+
Sbjct: 179 VEHECRPDPKSYRVLVEAFAVSGRIDEAFGFVQRYA-DSENAPHLGAYNTLMNRLGKANK 237
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
A ++ + +TY+ LI L LG KID+ W QKM
Sbjct: 238 AHAALEIFYKIKDRPNYKPDLVTYNVLIDL---LGKVGKIDECWSCY----QKMRLHFQP 290
Query: 226 CILSSYLMLGHLKEVGEI 243
I S +LG L G +
Sbjct: 291 DIFSYNTLLGRLGRAGRV 308
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 46/247 (18%), Positives = 102/247 (41%), Gaps = 22/247 (8%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 102
T TY LL +Y A E A E F +++ S + Y+ +M + + V ++
Sbjct: 12 TYVTYRILLRIYVDASMVEDALETFHKMEFSEIKPTLDDYHYIMFKLIRLKCPRVVPMIF 71
Query: 103 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS--CDSGGSDDWVKYVNLVNIY 160
E +++ V P+ TYN ISS + + + + M CD D Y L+N +
Sbjct: 72 ESMRKNLVRPNTQTYNFLISSLCSLGKMAEARWRFSYMKKYCDP----DEFTYAALINGF 127
Query: 161 ITASHLVNAESSTLVEAEKSITQR----QWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 216
++ +E + + R ++ ++ ++ G +++ +++ + +
Sbjct: 128 CKC-----MDTEVTLELLEEMLARGLRPNLALFNMMMDAHSRSGKHEQVIALFERMVEHE 182
Query: 217 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
+ ++Y ++ ++ + G + E + ++ S + + A N L+ KA
Sbjct: 183 CRPDPKSYRVLVEAFAVSGRIDEAFGFVQRYADSENAP-HLGAYNTLMNRLG------KA 235
Query: 277 NEFHMLL 283
N+ H L
Sbjct: 236 NKAHAAL 242
>gi|291228151|ref|XP_002734047.1| PREDICTED: leucine-rich PPR-motif containing-like [Saccoglossus
kowalevskii]
Length = 1067
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 91/200 (45%), Gaps = 2/200 (1%)
Query: 49 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 108
+L+ + + TE A +++++ + + N YN M+ +Y+ ++ +E ++
Sbjct: 154 SLMAELSAPERTELAHMIWDKLPELGIKRNTNHYNAMLKVYLQNNHQISLSEFLENMESS 213
Query: 109 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVN 168
V P+ TY I +I K L+ M D V + +L+ + A + N
Sbjct: 214 GVEPNRVTYQRIIGLYCQEGDIQGAGKVLEFMKKKDMPITDGV-FNSLITGHARAGDMAN 272
Query: 169 AESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICIL 228
AE + S+ + TY L+ YA G+ + I ++ K LR K++++N + +L
Sbjct: 273 AEGMLTIMRNVSL-EPTVDTYTSLMCAYAEKGDIENIREVLKQLRSEDTKLSNKNLMLVL 331
Query: 229 SSYLMLGHLKEVGEIIDQWK 248
S + GH + V EI+ +
Sbjct: 332 HSLVTSGHEEHVSEILSHMQ 351
>gi|242061252|ref|XP_002451915.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
gi|241931746|gb|EES04891.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
Length = 571
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 73/173 (42%), Gaps = 6/173 (3%)
Query: 38 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 97
P+ T + ++ + AK KA +F ++K A YN M+ + M GQ EK
Sbjct: 153 PICVVTPTELSEVVRMLGNAKMVSKAIAIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYEK 212
Query: 98 VALVVEEIKRK-NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 156
V + E+ + + PD TY+ IS+ D + L+EM D+G Y L
Sbjct: 213 VHELYNEMSTEGHCFPDTMTYSALISAFCKLGRRDSAIQLLNEMK-DNGMQPTTKIYTML 271
Query: 157 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIW 209
V ++ + V+ S E + TY LI GLG +ID+ +
Sbjct: 272 VALFFKLND-VHGALSLFEEMRHQYCRPDVFTYTELI---RGLGKAGRIDEAY 320
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 53/124 (42%), Gaps = 1/124 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY+AL+ + + A +L +K + + +Y ++ L+ + V + EE+
Sbjct: 232 TYSALISAFCKLGRRDSAIQLLNEMKDNGMQPTTKIYTMLVALFFKLNDVHGALSLFEEM 291
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ + PD+FTY I ID+ F EM G D + N++N A
Sbjct: 292 RHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQ-REGCRPDTIVMNNMINFLGKAGR 350
Query: 166 LVNA 169
L +A
Sbjct: 351 LDDA 354
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 88/205 (42%), Gaps = 11/205 (5%)
Query: 46 TYTALLH-LYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
TY ++ L+ + FER+K+S +S ++ Y+ ++ + ++EK +++EE
Sbjct: 372 TYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEE 431
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+ K P Y I + D + E+ + G S V Y ++ A
Sbjct: 432 MDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSSRV-YAVMIKHLGKAG 490
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
L +A + E K Y+ L+ +GL +D+ ++R +M
Sbjct: 491 RLDDA-INMFDEMNKLGCAPDVYAYNALM---SGLARTGMLDEALSTMR----RMQEHGC 542
Query: 225 ICILSSY-LMLGHLKEVGEIIDQWK 248
I ++SY ++L L++ ++I QW+
Sbjct: 543 IPDINSYNIILNGLQKQEDLIVQWR 567
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 53/283 (18%), Positives = 111/283 (39%), Gaps = 12/283 (4%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVK 71
Y + L K+ +H FE + + TYT L+ A ++A F ++
Sbjct: 268 YTMLVALFFKLNDVHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQ 327
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC-AATLNI 130
+ + ++ N M+ G+++ + +E+ +P + TYN I + +
Sbjct: 328 REGCRPDTIVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRA 387
Query: 131 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 190
+V + + M +SG S Y L++ + + + A L E ++ Y
Sbjct: 388 SEVPSWFERMK-ESGISPSSFTYSILIDGFCKTNRMEKA-MMLLEEMDEKGFPPCPAAYC 445
Query: 191 FLIILYAGLGNKDKID---QIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQW 247
LI LG + D ++++ L+ +SR Y ++ G L + + D+
Sbjct: 446 SLI---DALGKAKRYDLACELFQELKENCGSSSSRVYAVMIKHLGKAGRLDDAINMFDEM 502
Query: 248 KQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
+ + D+ A N L+ + G+ ++A + + C P
Sbjct: 503 NKLGCAP-DVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIP 544
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 57/124 (45%), Gaps = 4/124 (3%)
Query: 35 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 94
+G P Y +L+ AK + A ELF+ +K++ S ++ +Y M+ G+
Sbjct: 435 KGFP---PCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSSRVYAVMIKHLGKAGR 491
Query: 95 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 154
++ + +E+ + PD++ YN +S A T +D+ + M + G D Y
Sbjct: 492 LDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQ-EHGCIPDINSYN 550
Query: 155 NLVN 158
++N
Sbjct: 551 IILN 554
>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 18/194 (9%)
Query: 26 GIHSGERYFEGLPLSAKTSE--------TYTALLHLYAGAKWTEKAEELFERVKQSNLSF 77
G+ S + E L L K S TY AL++ + K ++A E+ + + + L+
Sbjct: 343 GLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAP 402
Query: 78 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFL 137
N + +N ++ Y G+++ L+ + V P++ TYN I N+ + +K
Sbjct: 403 NVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLA 462
Query: 138 DEMSCDSGGSDDWVKYVNLVNIYITASHLVNA----ESSTLVEAEKSITQRQWITYDFLI 193
EM +G D V Y LV+ A + TL+ EK + +TY+ LI
Sbjct: 463 KEME-GNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLM--EKKGRRANIVTYNVLI 519
Query: 194 ILYAGLGNKDKIDQ 207
G NK K+++
Sbjct: 520 ---KGFCNKGKLEE 530
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 100/243 (41%), Gaps = 5/243 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY ++ Y A KA+ L + + + N + +N ++ + V V EE+
Sbjct: 266 TYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEM 325
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+R+ + P++ TYN I+ + +D+ D+MS G + V Y L+N +
Sbjct: 326 QRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMS-GMGLKPNVVTYNALINGFCKKKM 384
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
L A L + K IT++ LI Y G D + + T Y
Sbjct: 385 LKEAR-EMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYN 443
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF--HMLL 283
C++ + G++KE ++ + + + D+ N L+ A G T KA M L
Sbjct: 444 CLIVGFCREGNVKEARKLAKEMEGNGLKA-DLVTYNILVDALCKKGETRKAVRLLDEMTL 502
Query: 284 LQK 286
++K
Sbjct: 503 MEK 505
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/251 (17%), Positives = 110/251 (43%), Gaps = 4/251 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+ L+ + + A+++FE +++ L N + YN ++ S G++++ + +++
Sbjct: 301 TFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKM 360
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ P++ TYN I+ + + ++ LD++ G + + + + L++ Y A
Sbjct: 361 SGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIG-KRGLAPNVITFNTLIDAYGKAGR 419
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ +A + + + TY+ LI+ + GN + ++ K + K Y
Sbjct: 420 MDDAFLLRSMMLDTGVCP-NVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYN 478
Query: 226 CILSSYLMLGHLKEVGEIIDQWK--QSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 283
++ + G ++ ++D+ + +I N L+ F + G E+AN +
Sbjct: 479 ILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEM 538
Query: 284 LQKNCAPTNAS 294
L+K P +
Sbjct: 539 LEKGLIPNRTT 549
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 44/230 (19%), Positives = 94/230 (40%), Gaps = 9/230 (3%)
Query: 64 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 123
E +++ + + + N + ++ ++ VG+ +K VVE++K P + TYN I
Sbjct: 214 ESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDG 273
Query: 124 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQ 183
+ + L EM ++ + + L++ + + V A E ++ Q
Sbjct: 274 YCKAGKMFKADALLKEMVAKRIHPNE-ITFNILIDGFCRDEN-VTAAKKVFEEMQRQGLQ 331
Query: 184 RQWITYDFLIILYAGLGNKDKIDQ---IWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 240
+TY+ LI GL + K+D+ + + K Y +++ + LKE
Sbjct: 332 PNVVTYNSLI---NGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEA 388
Query: 241 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
E++D + + ++ N L+ A+ G + A ++L P
Sbjct: 389 REMLDDIGKRGLAP-NVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCP 437
>gi|21686921|gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1833
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 54/102 (52%), Gaps = 3/102 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT L+H A T +A + F+++K+ ++ +A YN ++ + G++E VVEE+
Sbjct: 1621 TYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEM 1680
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFL---DEMSCDS 144
+ + P++ T+N IS+ + K L +E SC+
Sbjct: 1681 RTTGIAPNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNP 1722
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/155 (20%), Positives = 69/155 (44%), Gaps = 2/155 (1%)
Query: 18 IDLMTKVFGIHSGERYFEGLPLSAKTSE-TYTALLHLYAGAKWTEKAEELFERVKQSNLS 76
+D + K + F+ L + E ++ L+H + A+ ++A + E +KQ S
Sbjct: 1522 LDTLCKERSVKRARGVFQELRGTIPPDENSFNTLVHGWCKARMLKEALDTMEEMKQHGFS 1581
Query: 77 FNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKF 136
+ + Y ++ Y + V +++E++++ P++ TY + + + +
Sbjct: 1582 PSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTILMHALGKAGRTREALDT 1641
Query: 137 LDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES 171
D++ D G + D Y +L+ I A L +A S
Sbjct: 1642 FDKLKED-GVAPDASFYNSLIYILGRAGRLEDAYS 1675
>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
Length = 742
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 99/227 (43%), Gaps = 10/227 (4%)
Query: 40 SAKTSETYT--ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 97
S + ETYT L+ L + + A ELF+++ + N + ++ Y G K
Sbjct: 50 SGVSPETYTFNVLIGLLCDSGCLDDARELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSK 109
Query: 98 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 157
++ E++R P+ YN ISS D +K +DEM D G S D V + +
Sbjct: 110 GLELLGEMRRLGFSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKD-GLSPDVVTFNARI 168
Query: 158 NIYITASHLVNAE---SSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM 214
+ ++ ++ A ++ + Q ITY+ ++ + G ++ +++ +++
Sbjct: 169 SALCSSGKVLEASRIFRDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKV 228
Query: 215 TKQKMTSRNYICILSSYLMLGHLKE----VGEIIDQWKQSATSDFDI 257
++ M +Y L + +G L E + E++D + ++I
Sbjct: 229 SENLMNRESYNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNI 275
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 85/197 (43%), Gaps = 21/197 (10%)
Query: 35 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 94
E L L TY +L + E+A LFE++K S N YN + + +G+
Sbjct: 191 EVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGK 250
Query: 95 VEKVALVVEEIKRKNVVPDIFTYNLWISS-CAATLNIDQVKKFLDEMSCDSGGSDDWVKY 153
+ + LV++E+ + P++++YN+ + C + D + L + SG D V Y
Sbjct: 251 LLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDA--RMLMRLMTSSGVLPDTVTY 308
Query: 154 VNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 213
L++ Y + A ++ L E + Y I+LY+ +WK R
Sbjct: 309 TTLLHGYCHTGKVSEA-NNVLREMMRDGCSPN--NYTCNILLYS----------LWKEGR 355
Query: 214 MTK-----QKMTSRNYI 225
+++ QKM + Y+
Sbjct: 356 ISEAEELLQKMNEKGYV 372
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 112/283 (39%), Gaps = 67/283 (23%)
Query: 46 TYTALLHLYAGAK-------------------------------WTE----KAEELFERV 70
TYT LLH Y W E +AEEL +++
Sbjct: 307 TYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKM 366
Query: 71 KQSNLSFNALMYNEMMTLYMSVGQVEK-----------------------VALVVEEIKR 107
+ + + N ++ + G+++K + LV + R
Sbjct: 367 NEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSR 426
Query: 108 KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLV 167
K +PD+ +Y+ IS + + KK EM + D + Y ++ + +
Sbjct: 427 KKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAI-YDVFIHSFCKEGKIS 485
Query: 168 NAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN---Y 224
+A L + EK + TY+ LI+ GLG+K++I +I+ + +++ S + Y
Sbjct: 486 SA-FRVLKDMEKKGCNKTLQTYNSLIM---GLGSKNQIFEIYGLIDEMRERGVSPDVSIY 541
Query: 225 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAF 267
+LSS G +K+ ++D+ Q S +IS+ + L+ AF
Sbjct: 542 NNVLSSLCEGGRVKDAPSVLDEMLQKGISP-NISSFSILIKAF 583
>gi|242084804|ref|XP_002442827.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
gi|241943520|gb|EES16665.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
Length = 899
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 83/194 (42%), Gaps = 33/194 (17%)
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
+ A+ +F + S +A Y ++ Y +GQ+E+ ++ E++R V PD+ TYN++
Sbjct: 593 DHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVF 652
Query: 121 ISSCAATLNIDQVKKFLDEM---SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA 177
I+ C +D+ L M SC+ W+ + + + + +H V+
Sbjct: 653 INGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWILLKHFLKMSLVDAHYVDT-------- 704
Query: 178 EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL-RMTKQKM--TSRNYICILSSYLML 234
+G+ N ++D +W+ L RM K + T+ Y I++ +
Sbjct: 705 -------------------SGMWNWIELDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKA 745
Query: 235 GHLKEVGEIIDQWK 248
L+E + D +
Sbjct: 746 TRLEEACVLFDHMR 759
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 54/275 (19%), Positives = 106/275 (38%), Gaps = 14/275 (5%)
Query: 24 VFGIHSGERYFEGLPLSAKTSE--------TYTALLHLYAGAKWTEKAEELFERVKQSNL 75
++G+ ++ + + L K E TYT L+ + A LFE ++Q+ L
Sbjct: 411 IYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGL 470
Query: 76 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKK 135
+ + YN + G+ E+ + RK VV TY + + N D
Sbjct: 471 TPDEQAYNVLTHALCKSGRAEE---AYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAV 527
Query: 136 FLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIIL 195
+++M + G D Y L+ L N S L + S + + Y +I
Sbjct: 528 LIEKMV-NEGCKADSYTYSVLLQALCKQKKL-NEALSILDQMTLSGVKCNIVAYTIIISE 585
Query: 196 YAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDF 255
G D ++ + + K ++ Y +SSY +G ++E +I + ++ +
Sbjct: 586 MIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAP- 644
Query: 256 DISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
D+ N + +G ++A ++ +C P
Sbjct: 645 DVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEP 679
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 100/259 (38%), Gaps = 12/259 (4%)
Query: 37 LPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 94
+PL + +YT L+ + +A L + Q S N Y ++ G+
Sbjct: 151 MPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTYTLLIKGLCKEGR 210
Query: 95 VEKVALVVEEIKRKNVVPDIFTYNLWISS-CAATLNIDQ--VKKFLDEMSCDSGGSDDWV 151
+ V+EE+ + VVP ++TYN I C + D +K ++ C+ DDW
Sbjct: 211 IHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMERNGCN---PDDWT 267
Query: 152 KYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKS 211
N++ IY + L +A IT+ +I Y D ++ S
Sbjct: 268 --YNIL-IYGLCGEKPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKTS 324
Query: 212 LRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 271
+ + K+ + Y +++ + KE E + + + + ++ ++ + VG
Sbjct: 325 MLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAP-NVVIYTSIIDGYCKVG 383
Query: 272 LTEKANEFHMLLLQKNCAP 290
A E L+ + C P
Sbjct: 384 KVGAALEVFRLMEHEGCRP 402
>gi|78708657|gb|ABB47632.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1080
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/206 (18%), Positives = 90/206 (43%), Gaps = 2/206 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L++ + + +A E++ + + + Y+ +M + VE V ++ E+
Sbjct: 162 TYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREM 221
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ V P++++Y + I D+ + L +M + G D + + L+ + A
Sbjct: 222 EAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKME-NEGCKPDVITHTVLIQVLCDAGR 280
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ +A+ + +KS + +TY L+ + G+ + +IW +++ Y
Sbjct: 281 ISDAK-DVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYT 339
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSA 251
++ + +G + E E+ D+ KQ
Sbjct: 340 AVIDALCQVGRVFEALEMFDEMKQKG 365
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 81/198 (40%), Gaps = 8/198 (4%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
+ T TY LL A E AE LF + + N +YN ++ + G EKV
Sbjct: 857 SPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCH 916
Query: 101 VVEEIKRKNVVPDIFTYNLWISS-CAATLNIDQVKKF--LDEMSCDSGGSDDWVKYVNLV 157
+ +++ + + PDI +Y + I + C A D + F L EM G D + Y NL+
Sbjct: 917 LFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEM----GLEPDLITY-NLL 971
Query: 158 NIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 217
+ S + S E +K TY+ LI+ G + ++++ L
Sbjct: 972 IDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGW 1031
Query: 218 KMTSRNYICILSSYLMLG 235
K Y ++ Y + G
Sbjct: 1032 KPNVFTYNALIRGYSVSG 1049
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 108/239 (45%), Gaps = 13/239 (5%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT ++ + A ++A ++F + ++N + L N ++ G+ ++ + ++
Sbjct: 477 TYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQL 536
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K N+ P TYN ++ + +V L+EM S + + Y +++
Sbjct: 537 KEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMY-HSNYPPNLITYNTILDCLCK--- 592
Query: 166 LVNAESSTLVEAEKSITQRQWIT--YDFLIILYAGLGNKDKIDQIWKSL-RMTKQKMTSR 222
N + ++ S+T + I + ++Y GL +++ ++ + +M K +
Sbjct: 593 --NGAVNDALDMLYSMTTKGCIPDLSSYNTVIY-GLVKEERYNEAFSIFCQMKKVLIPDY 649
Query: 223 NYIC-ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLL-GAFSDVGLTEKANEF 279
+C IL S++ +G +KE II + S D S+C+ L+ G G+ EK+ EF
Sbjct: 650 ATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGI-EKSIEF 707
Score = 40.4 bits (93), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 52/120 (43%), Gaps = 2/120 (1%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVK 71
Y ID + K ++ G YF L + TY L+ +K E+A LF ++
Sbjct: 933 YTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQ 992
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
+ + N YN ++ G+ + + EE+ K P++FTYN I + + + D
Sbjct: 993 KKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTD 1052
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 90/226 (39%), Gaps = 5/226 (2%)
Query: 70 VKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLN 129
+K++ + NA YN ++ + G + V + VVP + TY++ + + +
Sbjct: 151 MKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRD 210
Query: 130 IDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITY 189
++ V L EM G + Y + + A A L + E + IT+
Sbjct: 211 VETVLWLLREMEA-HGVKPNVYSYTICIRVLGQAKRFDEA-YRILAKMENEGCKPDVITH 268
Query: 190 DFLIILYAGLGN-KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK 248
LI + G D D WK ++ + QK YI +L + G + V EI + K
Sbjct: 269 TVLIQVLCDAGRISDAKDVFWK-MKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMK 327
Query: 249 QSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
+D ++ A ++ A VG +A E + QK P S
Sbjct: 328 ADGYND-NVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYS 372
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 54/118 (45%), Gaps = 2/118 (1%)
Query: 52 HLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVV 111
HL K E A EL ++ K +S +YN ++ + ++ + E+K
Sbjct: 729 HLCKQKKALE-AHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCG 787
Query: 112 PDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 169
PD FTYNL + + ++ I+++ K +EM G +V Y +++ + + L A
Sbjct: 788 PDEFTYNLLLDAMGKSMRIEEMLKVQEEMH-RKGYESTYVTYNTIISGLVKSRRLEQA 844
>gi|414882130|tpg|DAA59261.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
Length = 1603
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 89/203 (43%), Gaps = 8/203 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY +LL+ Y A ++A LF ++++ L+ L YN ++ Y +G +E+ ++ EE+
Sbjct: 1262 TYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEM 1321
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ +P++ TY + + ++ ++F DEM G D Y + +
Sbjct: 1322 GEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEM-LSKGLQPDCFAYNTRICAELILGD 1380
Query: 166 LVNA---ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 222
+ A ++E S T +TY+ LI GN ++ + +
Sbjct: 1381 IARAFELREVLMLEGISSDT----VTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCI 1436
Query: 223 NYICILSSYLMLGHLKEVGEIID 245
Y C++ ++ G L+E +I +
Sbjct: 1437 TYTCLIHAHCERGLLREARKIFN 1459
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 48/100 (48%)
Query: 42 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 101
T TY A++H + E A+ F ++ L + + YN ++ Y G +++ L+
Sbjct: 1223 PTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLL 1282
Query: 102 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 141
+++R + P + TYN+ I ++++ + +EM
Sbjct: 1283 FGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMG 1322
Score = 37.4 bits (85), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 1/110 (0%)
Query: 10 SDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSE-TYTALLHLYAGAKWTEKAEELFE 68
+D Y I +T+ + EG+ LS K S TY L+ +K +L
Sbjct: 1155 NDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKASSFTYNPLITGLLARGCVKKVYDLQL 1214
Query: 69 RVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYN 118
++ + + YN M+ + G VE + E++ ++PD+ TYN
Sbjct: 1215 EMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYN 1264
>gi|302775226|ref|XP_002971030.1| hypothetical protein SELMODRAFT_94889 [Selaginella moellendorffii]
gi|300161012|gb|EFJ27628.1| hypothetical protein SELMODRAFT_94889 [Selaginella moellendorffii]
Length = 846
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 91/187 (48%), Gaps = 8/187 (4%)
Query: 27 IHSGERYFEGLPLSA-KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEM 85
IHS + +GL L++ T TA++ YA E+A E+FER++ L + + + M
Sbjct: 120 IHS-RIHQQGLKLTSNPTVICSTAMIDAYAQNGHIEQAAEIFERMQLQGLDPDLIAWTAM 178
Query: 86 MTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSG 145
MT Y +G + L+ ++ + + PD F + I +C++ +++Q + S
Sbjct: 179 MTAYNQLGHAREALLLFRKMDLQGLEPDRFAFVAAIDACSSIPSLEQGTVLHSRLLASSV 238
Query: 146 GSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKI 205
D V L+N Y A LV+ ES +L S+ + +T+ ++ YA G+ +
Sbjct: 239 ECDGVVGNA-LLNFYAKAG-LVH-ESRSLF---SSMKVKNVVTWSAIVAAYAQNGHHEPA 292
Query: 206 DQIWKSL 212
++++ +
Sbjct: 293 VELFREM 299
>gi|222612845|gb|EEE50977.1| hypothetical protein OsJ_31558 [Oryza sativa Japonica Group]
Length = 1263
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/206 (18%), Positives = 90/206 (43%), Gaps = 2/206 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L++ + + +A E++ + + + Y+ +M + VE V ++ E+
Sbjct: 287 TYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREM 346
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ V P++++Y + I D+ + L +M + G D + + L+ + A
Sbjct: 347 EAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKME-NEGCKPDVITHTVLIQVLCDAGR 405
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ +A+ + +KS + +TY L+ + G+ + +IW +++ Y
Sbjct: 406 ISDAK-DVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYT 464
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSA 251
++ + +G + E E+ D+ KQ
Sbjct: 465 AVIDALCQVGRVFEALEMFDEMKQKG 490
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 80/196 (40%), Gaps = 4/196 (2%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
+ T TY LL A E AE LF + + N +YN ++ + G EKV
Sbjct: 982 SPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCH 1041
Query: 101 VVEEIKRKNVVPDIFTYNLWISS-CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 159
+ +++ + + PDI +Y + I + C A D + F + + G D + Y NL+
Sbjct: 1042 LFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLL--EMGLEPDLITY-NLLID 1098
Query: 160 YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 219
+ S + S E +K TY+ LI+ G + ++++ L K
Sbjct: 1099 GLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKP 1158
Query: 220 TSRNYICILSSYLMLG 235
Y ++ Y + G
Sbjct: 1159 NVFTYNALIRGYSVSG 1174
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 108/239 (45%), Gaps = 13/239 (5%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT ++ + A ++A ++F + ++N + L N ++ G+ ++ + ++
Sbjct: 602 TYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQL 661
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K N+ P TYN ++ + +V L+EM S + + Y +++
Sbjct: 662 KEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMY-HSNYPPNLITYNTILDCLCK--- 717
Query: 166 LVNAESSTLVEAEKSITQRQWIT--YDFLIILYAGLGNKDKIDQIWKSL-RMTKQKMTSR 222
N + ++ S+T + I + ++Y GL +++ ++ + +M K +
Sbjct: 718 --NGAVNDALDMLYSMTTKGCIPDLSSYNTVIY-GLVKEERYNEAFSIFCQMKKVLIPDY 774
Query: 223 NYIC-ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLL-GAFSDVGLTEKANEF 279
+C IL S++ +G +KE II + S D S+C+ L+ G G+ EK+ EF
Sbjct: 775 ATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGI-EKSIEF 832
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 52/120 (43%), Gaps = 2/120 (1%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVK 71
Y ID + K ++ G YF L + TY L+ +K E+A LF ++
Sbjct: 1058 YTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQ 1117
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
+ + N YN ++ G+ + + EE+ K P++FTYN I + + + D
Sbjct: 1118 KKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTD 1177
Score = 40.4 bits (93), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 90/226 (39%), Gaps = 5/226 (2%)
Query: 70 VKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLN 129
+K++ + NA YN ++ + G + V + VVP + TY++ + + +
Sbjct: 276 MKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRD 335
Query: 130 IDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITY 189
++ V L EM G + Y + + A A L + E + IT+
Sbjct: 336 VETVLWLLREMEA-HGVKPNVYSYTICIRVLGQAKRFDEA-YRILAKMENEGCKPDVITH 393
Query: 190 DFLIILYAGLGN-KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK 248
LI + G D D WK ++ + QK YI +L + G + V EI + K
Sbjct: 394 TVLIQVLCDAGRISDAKDVFWK-MKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMK 452
Query: 249 QSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
+D ++ A ++ A VG +A E + QK P S
Sbjct: 453 ADGYND-NVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYS 497
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 51/108 (47%), Gaps = 1/108 (0%)
Query: 62 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 121
+A EL ++ K +S +YN ++ + ++ + E+K PD FTYNL +
Sbjct: 863 EAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLL 922
Query: 122 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 169
+ ++ I+++ K +EM G +V Y +++ + + L A
Sbjct: 923 DAMGKSMRIEEMLKVQEEMH-RKGYESTYVTYNTIISGLVKSRRLEQA 969
>gi|168038876|ref|XP_001771925.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676707|gb|EDQ63186.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 831
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 105/269 (39%), Gaps = 8/269 (2%)
Query: 28 HSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEM 85
HS FE + + +YT L+H YA A+ A E ++ +S NA Y+ +
Sbjct: 209 HSARAAFESMRAAGIEPNVHSYTNLIHAYAVAQDLRGAIACVEEMEAEGVSPNAATYSVI 268
Query: 86 MTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSG 145
++ Y +G VE + +N + YN I + N+++ + + M + G
Sbjct: 269 ISGYGRLGDVEAAERWFQRALSENWHHNDVIYNNIIHAYCKAGNMERAEAIMTAME-EQG 327
Query: 146 GSDDWVKYVNLVNIYI---TASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNK 202
Y L++ Y+ +N E ++ ++Y LI LY+ LG
Sbjct: 328 LEATLGLYNMLMDGYVHCRAVDKCLNVFRRLKARTETGLSP-TVVSYGCLINLYSKLGKM 386
Query: 203 DKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNR 262
DK QI + K + Y I+ Y+ LG + + + I+ N
Sbjct: 387 DKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANAFSVFEDMSNAGIKPDGITY-NI 445
Query: 263 LLGAFSDVGLTEKANEFHMLLLQKNCAPT 291
L+ AF G +A E + +C PT
Sbjct: 446 LMNAFCKNGQMNRALELLARMESGDCPPT 474
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 98/235 (41%), Gaps = 10/235 (4%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y ++H Y A E+AE + +++ L +YN +M Y+ V+K V +K
Sbjct: 300 YNNIIHAYCKAGNMERAEAIMTAMEEQGLEATLGLYNMLMDGYVHCRAVDKCLNVFRRLK 359
Query: 107 RK---NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
+ + P + +Y I+ + +D+ + +EM D G + Y +++ Y+
Sbjct: 360 ARTETGLSPTVVSYGCLINLYSKLGKMDKALQISNEME-DQGIKHNRKTYSMIIDGYVQL 418
Query: 164 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 223
NA S + + + ITY+ L+ + G ++ ++ + T R
Sbjct: 419 GDTANA-FSVFEDMSNAGIKPDGITYNILMNAFCKNGQMNRALELLARMESGDCPPTLRT 477
Query: 224 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC--NRLLGAFSDVGLTEKA 276
Y I+ ++ +G L+ E + K + F SA N ++ + G ++A
Sbjct: 478 YTIIIDGFMKIGDLRMAFETVRDMKMAG---FRPSAATYNVIMHGLAQAGQMDRA 529
Score = 44.7 bits (104), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 47/236 (19%), Positives = 96/236 (40%), Gaps = 3/236 (1%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
T TYT ++ + A E +K + +A YN +M GQ+++ A
Sbjct: 472 PPTLRTYTIIIDGFMKIGDLRMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAAS 531
Query: 101 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
+++E+ V P+ +Y I A ++ K+ + + + G D + Y +L+
Sbjct: 532 IIDEMVVAGVHPNERSYTTLIEGYACIGDMGLAFKYFNRIK-EVGLKPDVIAYASLLKAC 590
Query: 161 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 220
A + + + T A + +I Y+ L+ +A G+ + I + +R
Sbjct: 591 CKAGRMQSTLAITAEMAAAGVPMNNYI-YNILLDGWAQRGDMWEASDIMQKMRHEGLTPD 649
Query: 221 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
+Y +++ G + + E I+Q KQ ++ A L+ ++ EKA
Sbjct: 650 IHSYTSFINACCKAGDMLKATETIEQMKQQGVQP-NLQAYTTLIHGWASASYPEKA 704
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 40/212 (18%), Positives = 91/212 (42%), Gaps = 14/212 (6%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
+ T +Y L++LY+ +KA ++ ++ + N Y+ ++ Y+ +G
Sbjct: 367 SPTVVSYGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANAFS 426
Query: 101 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVK-YVNLVNI 159
V E++ + PD TYN+ +++ +++ + L M +SG ++ Y +++
Sbjct: 427 VFEDMSNAGIKPDGITYNILMNAFCKNGQMNRALELLARM--ESGDCPPTLRTYTIIIDG 484
Query: 160 YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 219
++ L A T+ + + + + TY+ ++ A G D+ I + +
Sbjct: 485 FMKIGDLRMA-FETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAASIIDEMVVAGVHP 543
Query: 220 TSRNYICILSSYLMLG----------HLKEVG 241
R+Y ++ Y +G +KEVG
Sbjct: 544 NERSYTTLIEGYACIGDMGLAFKYFNRIKEVG 575
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 95/242 (39%), Gaps = 26/242 (10%)
Query: 15 ATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSN 74
A+ ID M V G+H ER +YT L+ YA A + F R+K+
Sbjct: 530 ASIIDEMV-VAGVHPNER-------------SYTTLIEGYACIGDMGLAFKYFNRIKEVG 575
Query: 75 LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVK 134
L + + Y ++ G+++ + E+ V + + YN+ + A ++ +
Sbjct: 576 LKPDVIAYASLLKACCKAGRMQSTLAITAEMAAAGVPMNNYIYNILLDGWAQRGDMWEAS 635
Query: 135 KFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLII 194
+ +M G + D Y + +N A ++ A + T+ + ++ Q Y LI
Sbjct: 636 DIMQKMR-HEGLTPDIHSYTSFINACCKAGDMLKA-TETIEQMKQQGVQPNLQAYTTLIH 693
Query: 195 LYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLML----------GHLKEVGEII 244
+A +K + ++ Y CI++S L G L+ E++
Sbjct: 694 GWASASYPEKALICYDEMKSAGMIPDKPLYHCIMTSLLSRAAVARETVFDGVLRVTSEMV 753
Query: 245 DQ 246
DQ
Sbjct: 754 DQ 755
>gi|414864365|tpg|DAA42922.1| TPA: hypothetical protein ZEAMMB73_846849 [Zea mays]
Length = 485
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 109/255 (42%), Gaps = 17/255 (6%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
S+TY LL + + A LF + L A +Y ++ Y G +E VE
Sbjct: 125 SQTYARLLMMLGKCRQPGPAAGLFREMLSERLRPTADVYTALIGAYGYSGLLEHALAAVE 184
Query: 104 EIK-RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS-----CDSGGSDDWVKYVNLV 157
++K + PD +T+++ + CA + D + LDEMS C+S V + ++
Sbjct: 185 QMKGAADCKPDGYTFSVLVDCCAKSRRFDLIPAVLDEMSYLGIECNS------VIHNAII 238
Query: 158 NIYITASHLVNAES--STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMT 215
+ Y A+ E ST++E+ ++ T + ++ Y G D++++ + ++
Sbjct: 239 DGYGKAAMFEEMEGALSTMLESGSNVP--DIYTMNSVVGAYGNHGRTDEMEKSYSEFQLM 296
Query: 216 KQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEK 275
+ ++ + ++ SY G ++ I K+ S ++ N ++ F G EK
Sbjct: 297 GVEPDTKTFNIMIRSYGKAGMYVKMMSIFRYMKKRFFSPTAVT-FNTVIECFGRAGDIEK 355
Query: 276 ANEFHMLLLQKNCAP 290
+ L+ + P
Sbjct: 356 MEYYFRLMKIQGVKP 370
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 67/142 (47%), Gaps = 8/142 (5%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
+ T+ T+ ++ + A EK E F +K + N + Y ++ Y G ++KVA
Sbjct: 334 SPTAVTFNTVIECFGRAGDIEKMEYYFRLMKIQGVKPNPITYCSLVNGYSKAGLLDKVAG 393
Query: 101 VVEEIKRKNVVPDIFTYNLWISSCAATLNI---DQVKKFLDEMSCDSGGSDDWVKYVNLV 157
V+ + + NVV D +N IS+ A + +I +++ + + E C D + Y ++
Sbjct: 394 VIRQTENTNVVLDTPFFNCVISAYAKSGDIKIMEEMLQLMKEKRCKP----DRITYATMI 449
Query: 158 NIYITASHLVNAESSTLVEAEK 179
Y TA + A +EAE+
Sbjct: 450 QAY-TAHGMDEAAMLLEIEAER 470
>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
Length = 783
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 90/182 (49%), Gaps = 9/182 (4%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
+ TY L+ Y ++A ++ E + ++NL YN ++ + + G++++
Sbjct: 280 SPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFR 339
Query: 101 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
+ +E+++ NV+PD+ TYN I C+ + +V ++EM G + V Y N++ +
Sbjct: 340 IRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMD-KKGVKCNAVTY-NIILKW 397
Query: 161 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 220
+ + ++TL + E++ +TY+ LI Y G ++ K+ RM + MT
Sbjct: 398 MCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAG------KMGKAFRMMDE-MT 450
Query: 221 SR 222
S+
Sbjct: 451 SK 452
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 49/95 (51%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+Y +L + ++A +L +K LS N YN ++ Y +G +++ V+E +
Sbjct: 250 SYNTILDALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIM 309
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
R N++P ++TYN+ ++ ID+ + DEM
Sbjct: 310 TRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEM 344
Score = 37.7 bits (86), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 52/278 (18%), Positives = 105/278 (37%), Gaps = 42/278 (15%)
Query: 46 TYTALLHLYAGAKWTEKAE--ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
TY L+ ++W + +E L E + + + NA+ YN ++ G + + ++
Sbjct: 355 TYNTLID--GCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLD 412
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
+++ + PD TYN I + + + + +DEM+ D W +N + +
Sbjct: 413 KMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWT--LNTILHCLCV 470
Query: 164 SHLVNAESSTLVEAEKSITQRQWITYDFLIILY--------------------------- 196
++ + L A K ++Y LI+ Y
Sbjct: 471 EKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTIT 530
Query: 197 -----AGLGNKDKIDQIWKSL-RMTKQKMTS--RNYICILSSYLMLGHLKEVGEIIDQWK 248
GL K+DQ L M + + Y I+ + + G++++ + ++
Sbjct: 531 YNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMI 590
Query: 249 QSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 286
++ D+ CN LL G+ EKA + L+ K
Sbjct: 591 ENLFKP-DVYTCNILLRGLCREGMLEKALKLFNTLVSK 627
>gi|224065693|ref|XP_002301924.1| predicted protein [Populus trichocarpa]
gi|222843650|gb|EEE81197.1| predicted protein [Populus trichocarpa]
Length = 709
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 102/236 (43%), Gaps = 11/236 (4%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
+TY+ L+ Y A+ E A + + ++ SN+ NA +++ ++ Y G+ +K V+ E
Sbjct: 377 QTYSLLIDAYGNAERWESARIVLKEMEASNVQPNAYVFSRILASYRDKGEWQKTFQVLRE 436
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
++ V PD YN+ I + +D D M G D + + LV+ + A
Sbjct: 437 MEDSGVRPDRIFYNVLIDTFGKFNCLDHAMATFDRM-LSEGIEPDTITWNTLVDCHCKAG 495
Query: 165 HLVNAESSTLVEAEKSITQRQWI----TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 220
AE E + + ++ ++ T++ +I + D + + ++R
Sbjct: 496 KHDRAE-----ELFEEMMEKGYLPCNTTFNIMINSFGDQERWDDVKNLLTNMRSQGLLPN 550
Query: 221 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
+ Y ++ Y G + E +D K + + N LL A++ GL+++A
Sbjct: 551 AVTYTTLIDIYGKSGRFDDAIECLDDMKAAGLKP-SSTMYNALLNAYAQRGLSDQA 605
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 1/117 (0%)
Query: 35 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 94
+G LS KT+ T + L TE+AE +FE ++ + L YN ++ Y+ G
Sbjct: 298 QGSGLSVKTATLVTVIWGL-GNCGRTEEAEAIFEEMRDNGLQPRTRAYNALLRGYVKAGL 356
Query: 95 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWV 151
+ VV E++R V+P+ TY+L I + + + L EM + + +V
Sbjct: 357 LRDAEFVVSEMERSGVLPNEQTYSLLIDAYGNAERWESARIVLKEMEASNVQPNAYV 413
>gi|357442727|ref|XP_003591641.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|92882355|gb|ABE86686.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355480689|gb|AES61892.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 827
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 85/200 (42%), Gaps = 3/200 (1%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
S TY L+ Y A ++A E F ++ + + + +N M+ + + G++E+V+ ++
Sbjct: 285 SHTYNTLIDTYGKAGQHKEASETFAKMLKQGIPPTTVTFNTMIHICGNHGRLEEVSSLLR 344
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
++ PD TYN IS +ID K+ M +S D V Y L+ Y
Sbjct: 345 KMGELRCSPDTRTYNTLISLHTKHNDIDMATKYFKRMK-ESYLEPDPVSYRTLLYAYSIR 403
Query: 164 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 223
+ AE EK + Q+ T L +Y G ++ +W MTS
Sbjct: 404 KMVCEAEELITEMDEKGLEIDQF-TQSALTRMYIEAGMPER-SLLWFQRFHRAGNMTSEC 461
Query: 224 YICILSSYLMLGHLKEVGEI 243
Y + +Y GH+ E ++
Sbjct: 462 YAANIDAYGERGHISEAEKV 481
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/287 (20%), Positives = 115/287 (40%), Gaps = 47/287 (16%)
Query: 15 ATRIDLMTKVFGIHSGERYFEGLPL--------SAKTSETYTALLHLYAGAKWTEKAEEL 66
A ++M K +G+ G+ Y + L A +Y++L+ + A A A+
Sbjct: 493 AVEFNVMIKAYGV--GKYYDKACQLFDSMDKHGVAADRCSYSSLIQVLASADQPHIAKPY 550
Query: 67 FERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAA 126
+R++ + L N + Y +++ ++ +GQ+E V +E+ V PDI Y + I++
Sbjct: 551 LKRMQVAGLVTNCIPYCAVISCFVKLGQLEMAEGVYKEMIGHGVKPDIIVYGVLINALYG 610
Query: 127 TLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESS-------------- 172
+ + + +E+ +G + V Y +L+ +Y +L A+ +
Sbjct: 611 AGRVKEAISYANEIK-RAGLPGNTVIYNSLIKLYTKVGNLREAQETYRLLQSSEEGPAVY 669
Query: 173 ------------TLVEAEKSITQR-------QWITYDFLIILYAGLGNKDKIDQIWKSLR 213
++VE K I + ++ ++ LY + D QI +R
Sbjct: 670 SSNCMIGLYTKQSMVEQAKEIFETLKKNGTANEFSFAMMLCLYKNIERFDVAIQIANQMR 729
Query: 214 MTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 260
+ S +Y +L Y G KE EI +K T+ + C
Sbjct: 730 KLELLTDSLSYNIVLDLYATAGRPKEAIEI---FKDMVTASIQLDDC 773
Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 81/197 (41%), Gaps = 27/197 (13%)
Query: 63 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 122
A E ER SN SF + YN ++ Y GQ ++ + ++ ++ + P T+N I
Sbjct: 269 APESVERALFSNASFGSHTYNTLIDTYGKAGQHKEASETFAKMLKQGIPPTTVTFNTMIH 328
Query: 123 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT 182
C +++V L +M + S D Y L++++ T + ++ + ++S
Sbjct: 329 ICGNHGRLEEVSSLLRKMG-ELRCSPDTRTYNTLISLH-TKHNDIDMATKYFKRMKESYL 386
Query: 183 QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 242
+ ++Y L+ Y + R +C + ++ + E G
Sbjct: 387 EPDPVSYRTLLYAY-----------------------SIRKMVC--EAEELITEMDEKGL 421
Query: 243 IIDQWKQSATSDFDISA 259
IDQ+ QSA + I A
Sbjct: 422 EIDQFTQSALTRMYIEA 438
>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 60/124 (48%), Gaps = 1/124 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYTAL+ Y ++A L ++ Q L+ N + Y + G+V+ ++ E+
Sbjct: 330 TYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEM 389
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
RK + +I+TYN ++ NIDQ K + +M +G D V Y L++ Y +
Sbjct: 390 CRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEV-AGFHPDAVTYTTLMDAYCKSRE 448
Query: 166 LVNA 169
+V A
Sbjct: 449 MVRA 452
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/126 (20%), Positives = 53/126 (42%), Gaps = 1/126 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY ++ L +AE + + ++ + ++Y ++ + +G V + +E+
Sbjct: 225 TYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEM 284
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+++ + PD TY I T + + K EM C D+ V Y L++ Y
Sbjct: 285 QKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDE-VTYTALIDGYCKEGK 343
Query: 166 LVNAES 171
+ A S
Sbjct: 344 MKEAFS 349
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 81/193 (41%), Gaps = 7/193 (3%)
Query: 96 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 155
E V ++EE++ K + P+ +TYN I T + + ++ L EM G + D V Y
Sbjct: 205 EWVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREM-ISEGIAPDGVIYTT 263
Query: 156 LVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMT 215
L++ + + V++ E +K +ITY +I G + D+++ +
Sbjct: 264 LIDGFCKLGN-VSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCK 322
Query: 216 KQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEK 275
+ + Y ++ Y G +KE + +Q Q + +I L G +
Sbjct: 323 RLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTP-NIVTYTALADGLCKCGEVDT 381
Query: 276 ANEFHMLLLQKNC 288
ANE LL + C
Sbjct: 382 ANE----LLHEMC 390
>gi|357127090|ref|XP_003565218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Brachypodium distachyon]
Length = 886
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 53/95 (55%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+TAL++ + AK ++A LF ++ +SNL N + +N ++ Y VG + K + +++
Sbjct: 479 TFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQM 538
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
+ + PD +TY IS T + K+F+ ++
Sbjct: 539 MCRGLTPDNYTYRSLISGLCLTDGASKAKEFVADL 573
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 105/245 (42%), Gaps = 7/245 (2%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
+ +Y + H +A +L +++ + + Y+ ++ Y VG++++V ++E
Sbjct: 253 TASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIE 312
Query: 104 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
E++ K + P+ +TYN I T + + ++ L EM G + D V Y L++ +
Sbjct: 313 EMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREM-ISEGIAPDGVIYTTLIDGFCKL 371
Query: 164 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 223
+ V++ E +K +ITY +I G + D+++ + + +
Sbjct: 372 GN-VSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVT 430
Query: 224 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 283
Y ++ Y G +KE + +Q Q + +I L G + ANE L
Sbjct: 431 YTALIDGYCKEGKMKEAFSLHNQMLQMGLTP-NIVTYTALADGLCKCGEVDTANE----L 485
Query: 284 LQKNC 288
L + C
Sbjct: 486 LHEMC 490
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 60/124 (48%), Gaps = 1/124 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYTAL+ Y ++A L ++ Q L+ N + Y + G+V+ ++ E+
Sbjct: 430 TYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEM 489
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
RK + +I+TYN ++ NIDQ K + +M +G D V Y L++ Y +
Sbjct: 490 CRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEV-AGFHPDAVTYTTLMDAYCKSRE 548
Query: 166 LVNA 169
+V A
Sbjct: 549 MVRA 552
>gi|255581238|ref|XP_002531431.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528950|gb|EEF30943.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 737
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/256 (17%), Positives = 105/256 (41%), Gaps = 6/256 (2%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
A+ E + ++ Y+ A A ++ ++++ + N L+ N + + + ++EK
Sbjct: 168 ARRPEAFAHVMVSYSRAGKLRNAMQVLTMMQKAGVEPNLLICNTAIHVLVMANKLEKALR 227
Query: 101 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
+E ++ + P++ TYN I ++ + + EM G D V Y ++
Sbjct: 228 FLERMQLVGITPNVVTYNCLIKGYCDLYQVEHAMELIAEMP-FKGCPPDKVSYYTVMGFL 286
Query: 161 ITASHLVNAES--STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQK 218
+ + +V+ K + +TY+ L+ + + G+ D+ + + +
Sbjct: 287 CQDKRIKEVRNLMEKMVKDNKLFPDQ--VTYNTLVHMLSKHGHADEALEFLRETEERGFQ 344
Query: 219 MTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 278
+ Y I++S+ M G + EI+++ S D+ ++ VG E+A +
Sbjct: 345 VDKVGYSAIVNSFCMQGRMDRAKEIVNEMITKGCSP-DVVTYTAVVNGLCKVGKVEEAKK 403
Query: 279 FHMLLLQKNCAPTNAS 294
+ + C P S
Sbjct: 404 MLQQMYKHGCKPNTVS 419
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 24/113 (21%), Positives = 52/113 (46%), Gaps = 1/113 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L+H+ + ++A E ++ + + Y+ ++ + G++++ +V E+
Sbjct: 314 TYNTLVHMLSKHGHADEALEFLRETEERGFQVDKVGYSAIVNSFCMQGRMDRAKEIVNEM 373
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 158
K PD+ TY ++ +++ KK L +M G + V Y L+N
Sbjct: 374 ITKGCSPDVVTYTAVVNGLCKVGKVEEAKKMLQQMY-KHGCKPNTVSYTALLN 425
>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
Length = 699
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 75/167 (44%), Gaps = 1/167 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+T L+ A +A++L E++ S N + Y+ ++ GQV+ + + +
Sbjct: 269 TFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLM 328
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+R+N P++ T+N+ I I++ ++ M ++G + D + Y +L++ +
Sbjct: 329 ERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMR-ETGCAPDIITYNSLIDGLCKSFQ 387
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 212
+ A E ++ +TY L YA LG +I+ L
Sbjct: 388 VDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSML 434
Score = 40.4 bits (93), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 2/113 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L+ ++ A + A +L E +K S NA+++ +M G+V + AL
Sbjct: 59 TYGILIRGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVE-ALEHFRA 117
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 158
K+ PD+ TY + + D+ + L EM G + D V + L++
Sbjct: 118 MAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMV-AQGCAPDTVTFSTLID 169
Score = 40.4 bits (93), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 88/227 (38%), Gaps = 21/227 (9%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLP---LSAKTSETYTALLHLYAGAKWTEKAEELFERV 70
Y + ID + K F + + F+ +P +SA + TY+ L H YA A +F +
Sbjct: 375 YNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSML 434
Query: 71 KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 130
S + Y ++ Y + +V +VEE+ K P + T + + +
Sbjct: 435 VDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHT 494
Query: 131 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQW---- 186
++ + D M+ G +DD + Y N+ + + L E+ I +R
Sbjct: 495 ERAIQLFDSMA-ARGCTDDALIY----NLVVEGMARASKHDKALAVLEQVIDKRDRKFNP 549
Query: 187 --ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSY 231
D L+ +G D Q+ KM+ R + +SSY
Sbjct: 550 SSSAVDALVESLCQVGKTDDAKQLL-------HKMSERGFAAAVSSY 589
>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 872
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 94/207 (45%), Gaps = 27/207 (13%)
Query: 42 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 101
++S TALL Y ++A ++F + ++ + ++ M+ Y G+ E +
Sbjct: 430 RSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDI----VAWSAMLAGYAQAGETEAAIKI 485
Query: 102 VEEIKRKNVVPDIFTYNLWISSCAA-TLNIDQVKKF--------LDEMSCDSGGSDDWVK 152
E+ + V P+ FT++ ++ CAA T ++ Q K+F LD C S
Sbjct: 486 FSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQFHGFAIKSRLDSSLCVSSA------ 539
Query: 153 YVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 212
L+ +Y H+ +AE E K ++ ++++ +I YA G K ++K +
Sbjct: 540 ---LLTMYAKKGHIESAE-----EVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEM 591
Query: 213 RMTKQKMTSRNYICILSSYLMLGHLKE 239
+ K KM S +I + ++ G ++E
Sbjct: 592 KKRKVKMDSVTFIGVFAACTHAGLVEE 618
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 68/141 (48%), Gaps = 7/141 (4%)
Query: 32 RYFEGLPLSAKTSETY---TALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTL 88
+ F G + ++ + +ALL +YA E AEE+F+R ++ +L + +N M++
Sbjct: 519 KQFHGFAIKSRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQREKDL----VSWNSMISG 574
Query: 89 YMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSD 148
Y GQ K V +E+K++ V D T+ ++C +++ +K+ D M D +
Sbjct: 575 YAQHGQAMKALDVFKEMKKRKVKMDSVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAP 634
Query: 149 DWVKYVNLVNIYITASHLVNA 169
+V++Y A L A
Sbjct: 635 TKEHNSCMVDLYSRAGQLEKA 655
>gi|413926076|gb|AFW66008.1| hypothetical protein ZEAMMB73_411794 [Zea mays]
Length = 633
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 75/164 (45%), Gaps = 13/164 (7%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
+ ++L A+ T +A +L + + ++ + MYN + + + QV ++ + + ++
Sbjct: 393 FVSMLEALCNAEKTTEAIDLLHMMPEKGITTDVGMYNMIFSALGKLKQVSFMSSLYDTMR 452
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
VVPD+FTYN+ ISS +D+ + +EM D D V Y +++N
Sbjct: 453 ANGVVPDVFTYNIMISSFGRVGLVDKASELFEEME-DGSCKPDVVTYNSMINCL------ 505
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLIILYAGL----GNKDKID 206
++ L EA Q YD + Y+ L G +K+D
Sbjct: 506 --GKNGDLDEAHMLFKDMQEKGYDPDVFTYSILIECFGKSNKVD 547
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 47/95 (49%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY ++ + +KA ELFE ++ + + + YN M+ G +++ ++ +++
Sbjct: 462 TYNIMISSFGRVGLVDKASELFEEMEDGSCKPDVVTYNSMINCLGKNGDLDEAHMLFKDM 521
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
+ K PD+FTY++ I + +D DEM
Sbjct: 522 QEKGYDPDVFTYSILIECFGKSNKVDMACSLFDEM 556
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 105/257 (40%), Gaps = 30/257 (11%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT L+ + A T K L E + N + YN ++ V++ ++ ++
Sbjct: 255 TYTILIRMSGKAGKTTKFVSLLEEMVSEGCVLNLIAYNTVIEALGKNKMVDEAIFMLSKM 314
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ P+ FTY++ + + + ++ + LD S G + Y L+ + H
Sbjct: 315 IESDCRPNQFTYSIMLDVLSTGGQLHRLNEILDICS----GCLNRPVYSYLIKALCKSGH 370
Query: 166 LVNAESSTLVEAEKSITQRQWIT------YDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 219
A S+ R W + Y F+ +L A L N +K + L M +K
Sbjct: 371 ASEAH---------SVFCRMWNSHEKGDRYAFVSMLEA-LCNAEKTTEAIDLLHMMPEKG 420
Query: 220 TSRN---YICILSSYLMLGHLKEV---GEIIDQWKQSATSDFDISACNRLLGAFSDVGLT 273
+ + Y I S+ LG LK+V + D + + D+ N ++ +F VGL
Sbjct: 421 ITTDVGMYNMIFSA---LGKLKQVSFMSSLYDTMRANGVVP-DVFTYNIMISSFGRVGLV 476
Query: 274 EKANEFHMLLLQKNCAP 290
+KA+E + +C P
Sbjct: 477 DKASELFEEMEDGSCKP 493
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 43/95 (45%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L+ + ++ K E++E++++ + YN ++ G V++ V E++
Sbjct: 185 TYKCLVQAHLRSREVWKGFEVYEKMRRKGYKLDIFAYNMLLNALAKAGMVDQAYQVFEDM 244
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 140
K+ PD +TY + I + L+EM
Sbjct: 245 KQNYCDPDAYTYTILIRMSGKAGKTTKFVSLLEEM 279
>gi|302768589|ref|XP_002967714.1| hypothetical protein SELMODRAFT_63558 [Selaginella moellendorffii]
gi|300164452|gb|EFJ31061.1| hypothetical protein SELMODRAFT_63558 [Selaginella moellendorffii]
Length = 384
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 66/148 (44%), Gaps = 2/148 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT L+ YA + +LF+ +K S N+ YN ++ Y G ++ + +E+
Sbjct: 90 TYTNLIKEYANTGRLQDCRKLFQEMKDKGESPNSWTYNALIQGYGRKGLFKEALELYDEM 149
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
D+ TYN+ I+ ++ +++ LDEM G D V Y L+++Y S+
Sbjct: 150 DGVGCAKDVHTYNIAIAMYGKRGLLEDMERLLDEMDT-KGVPPDQVTYNTLLDVYAKKSY 208
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLI 193
V A E W TY+ ++
Sbjct: 209 FVKAHEILREMTEAGYRPNIW-TYNIML 235
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 57/116 (49%), Gaps = 2/116 (1%)
Query: 46 TYTALLHLYAGAKWT-EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
TYT ++H Y K + A L E +K+S + ++YN ++ ++ G++E ++++
Sbjct: 19 TYTVIIHGYLRQKSKLDHALRLLEVMKESGKKPDEILYNCLVNGLVNSGRLEAAEKILDD 78
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
+KR V ++ TY I A T + +K EM D G S + Y L+ Y
Sbjct: 79 MKRDKVSANLVTYTNLIKEYANTGRLQDCRKLFQEMK-DKGESPNSWTYNALIQGY 133
Score = 44.3 bits (103), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 53/261 (20%), Positives = 103/261 (39%), Gaps = 5/261 (1%)
Query: 32 RYFEGLPLSAKTSET--YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLY 89
R E + S K + Y L++ + E AE++ + +K+ +S N + Y ++ Y
Sbjct: 39 RLLEVMKESGKKPDEILYNCLVNGLVNSGRLEAAEKILDDMKRDKVSANLVTYTNLIKEY 98
Query: 90 MSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDD 149
+ G+++ + +E+K K P+ +TYN I + + DEM D G
Sbjct: 99 ANTGRLQDCRKLFQEMKDKGESPNSWTYNALIQGYGRKGLFKEALELYDEM--DGVGCAK 156
Query: 150 WVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIW 209
V N+ L+ L E + +TY+ L+ +YA K +I
Sbjct: 157 DVHTYNIAIAMYGKRGLLEDMERLLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEIL 216
Query: 210 KSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSD 269
+ + + Y +LSS + E ++ + K +I + +L +
Sbjct: 217 REMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENLKSKGVVP-NIVTYSAMLSLYGR 275
Query: 270 VGLTEKANEFHMLLLQKNCAP 290
GL +A + +++ C P
Sbjct: 276 HGLYTEAAKLWDEMIEAGCIP 296
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 51/115 (44%), Gaps = 1/115 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY LL +YA + KA E+ + ++ N YN M++ V + + E +
Sbjct: 195 TYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENL 254
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
K K VVP+I TY+ +S + K DEM ++G + Y L+ Y
Sbjct: 255 KSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEM-IEAGCIPCIIAYSGLIESY 308
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 39/201 (19%), Positives = 83/201 (41%), Gaps = 4/201 (1%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
AK TY + +Y E E L + + + + + YN ++ +Y K
Sbjct: 155 AKDVHTYNIAIAMYGKRGLLEDMERLLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHE 214
Query: 101 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
++ E+ P+I+TYN+ +SS ++ + + + + G + V Y ++++Y
Sbjct: 215 ILREMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENLK-SKGVVPNIVTYSAMLSLY 273
Query: 161 ITASHLVNAESSTL-VEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 219
H + E++ L E ++ I Y LI Y G + ++ +R +
Sbjct: 274 --GRHGLYTEAAKLWDEMIEAGCIPCIIAYSGLIESYGHHGMYQEALACFQDMRKSGIVP 331
Query: 220 TSRNYICILSSYLMLGHLKEV 240
++ Y ++ +Y G +E
Sbjct: 332 DTKIYTALMDAYGKAGRCREA 352
>gi|356528278|ref|XP_003532731.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27270-like [Glycine max]
Length = 1079
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 101/232 (43%), Gaps = 4/232 (1%)
Query: 49 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 108
A+ L G K E AE + +R + NL + + YN + + G++ + + E +
Sbjct: 758 AVNSLTNGGKHQE-AENIVQRSLEENLELDTVAYNTFIKAMLEAGKLHFASSIFEHMISS 816
Query: 109 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVN 168
V P I T+N IS +D+ + ++ S S D+ Y+NL+ Y A ++
Sbjct: 817 GVAPSIETFNTMISVYGQDQKLDRAVEMFNQASSCSVPLDEKT-YMNLIGYYGKAGLMLE 875
Query: 169 AESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICIL 228
A S + ++ + ++Y+ +I +YA G + ++++ +++ S Y+ ++
Sbjct: 876 A-SQLFSKMQEGGIKPGKVSYNIMINVYANAGVLHETEKLFHTMQRQGYLPDSFTYLSLV 934
Query: 229 SSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 280
+Y + + E I QS N LL AF GL +A +
Sbjct: 935 QAYTRSLNYSKAEETIHAM-QSKGIPPSCVHFNILLHAFIKAGLIHEAKRVY 985
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 61/128 (47%), Gaps = 4/128 (3%)
Query: 37 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 96
+PL KT Y L+ Y A +A +LF ++++ + + YN M+ +Y + G +
Sbjct: 853 VPLDEKT---YMNLIGYYGKAGLMLEASQLFSKMQEGGIKPGKVSYNIMINVYANAGVLH 909
Query: 97 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 156
+ + ++R+ +PD FTY + + +LN + ++ + M G V + L
Sbjct: 910 ETEKLFHTMQRQGYLPDSFTYLSLVQAYTRSLNYSKAEETIHAMQ-SKGIPPSCVHFNIL 968
Query: 157 VNIYITAS 164
++ +I A
Sbjct: 969 LHAFIKAG 976
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 95/237 (40%), Gaps = 39/237 (16%)
Query: 78 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFL 137
N Y ++ ++ G E +E++ VVP+ TY+L I+ A + N D+V++
Sbjct: 300 NNFTYTVAISSFVKEGLHEDAFKTFDEMRNYGVVPEELTYSLLINLNAKSGNRDEVQRLY 359
Query: 138 DEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES--STLVEAEKSITQRQWITYDFLIIL 195
++M ++ +L+++Y A S S +V + S + + Y LI +
Sbjct: 360 EDMRFRGIIPSNYT-CASLLSLYYKYEDYPRALSLFSEMVRNKISTDE---VIYGLLIRI 415
Query: 196 YAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQS----- 250
Y LG + + ++ + Q + + Y+ + +L G++ + E+I+ K S
Sbjct: 416 YGKLGLYEDAHKTFEETKNRGQLTSEKTYLAMAQVHLTSGNVDKALEVIELMKSSNLWFS 475
Query: 251 ----------------------------ATSDFDISACNRLLGAFSDVGLTEKANEF 279
T D +CN +L + + LT KA EF
Sbjct: 476 RFAYIVLLQCYVMKEDVASAEGTFLALSKTGPPDAGSCNDMLSLYMGLNLTNKAKEF 532
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 49/249 (19%), Positives = 105/249 (42%), Gaps = 5/249 (2%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLS--AKTSETYTALLHLYAGAKWTEKAEELFERVK 71
Y T I M + +H FE + S A + ET+ ++ +Y + ++A E+F +
Sbjct: 790 YNTFIKAMLEAGKLHFASSIFEHMISSGVAPSIETFNTMISVYGQDQKLDRAVEMFNQAS 849
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
++ + Y ++ Y G + + + + +++ + P +YN+ I+ A +
Sbjct: 850 SCSVPLDEKTYMNLIGYYGKAGLMLEASQLFSKMQEGGIKPGKVSYNIMINVYANAGVLH 909
Query: 132 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 191
+ +K M G D Y++LV Y + + AE + K I + ++
Sbjct: 910 ETEKLFHTMQ-RQGYLPDSFTYLSLVQAYTRSLNYSKAEETIHAMQSKGIPP-SCVHFNI 967
Query: 192 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 251
L+ + G + ++++ L + +L+ YL G+++E + +S
Sbjct: 968 LLHAFIKAGLIHEAKRVYEDLSTFGLVPDLVCHRTMLNGYLKCGYVEEGINFFESICEST 1027
Query: 252 TSD-FDISA 259
SD F +SA
Sbjct: 1028 KSDRFIMSA 1036
>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
Length = 651
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 75/167 (44%), Gaps = 1/167 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+T L+ A +A++L E++ S N + Y+ ++ GQV+ + + +
Sbjct: 221 TFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLM 280
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+R+N P++ T+N+ I I++ ++ M ++G + D + Y +L++ +
Sbjct: 281 ERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMR-ETGCAPDIITYNSLIDGLCKSFQ 339
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 212
+ A E ++ +TY L YA LG +I+ L
Sbjct: 340 VDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSML 386
Score = 40.8 bits (94), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 89/227 (39%), Gaps = 21/227 (9%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLP---LSAKTSETYTALLHLYAGAKWTEKAEELFERV 70
Y + ID + K F + + F+ +P +SA + TY+ L H YA A +F +
Sbjct: 327 YNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSML 386
Query: 71 KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 130
S + Y ++ Y + +V +VEE+ K P + T + + +
Sbjct: 387 VDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHT 446
Query: 131 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQW---- 186
++ + D M+ G +DD + Y N+ + + + L E+ I +R
Sbjct: 447 ERAIQLFDSMA-ARGCTDDALIY----NLVVEGMARASKHNKALAVLEQVIDKRDRKFNP 501
Query: 187 --ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSY 231
D L+ +G D Q+ KM+ R + +SSY
Sbjct: 502 SSSAVDALVESLCQVGRTDDAKQLL-------HKMSERGFAAAVSSY 541
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 51/113 (45%), Gaps = 2/113 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L+ ++ A + A +L E +K + NA+++ +M G+V + AL
Sbjct: 11 TYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVE-ALEHFRA 69
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 158
K+ PD+ TY + + D+ + L EM G + D V + L++
Sbjct: 70 MAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMI-ARGCAPDTVTFSTLID 121
>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 901
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 97/223 (43%), Gaps = 4/223 (1%)
Query: 8 VLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAK--TSETYTALLHLYAGAKWTEKAEE 65
VL Y T ID K ++ + E + + T TY +++ A ++A
Sbjct: 614 VLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYM 673
Query: 66 LFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCA 125
LFE K + L N ++Y+ ++ + VG++++ L++EE+ +K + P+++T+N + +
Sbjct: 674 LFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALV 733
Query: 126 ATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQ 185
I++ M + G+ + + Y L+N N E +K +
Sbjct: 734 KAEEINEALVCFQNMK-NLKGTPNHITYSILINGLCRVRKF-NKAFVFWQEMQKQGLKPN 791
Query: 186 WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICIL 228
ITY +I A GN + +++ + S +Y I+
Sbjct: 792 TITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAII 834
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/247 (19%), Positives = 103/247 (41%), Gaps = 8/247 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT+++ + ++A E+FE+++Q+ A YN M+ Y S G+ ++ ++E
Sbjct: 305 TYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQ 364
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K + +P + YN ++ + + + +EM D+ + + Y L+++ A
Sbjct: 365 KARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKKDA--APNLSTYNVLIDMLCKAGE 422
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ A E + +T + +I L K+D+ K+ S + +
Sbjct: 423 VEAAFKVRDAMKEAGLFP-NVMTVNIMI---DRLCKAKKLDEACSIFEGMNHKICSPDEV 478
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC--NRLLGAFSDVGLTEKANEFHMLL 283
S LG V + ++Q SD +A L+ +F G E ++ +
Sbjct: 479 TFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEM 538
Query: 284 LQKNCAP 290
+ + C+P
Sbjct: 539 IHRGCSP 545
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 100/238 (42%), Gaps = 18/238 (7%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
YT L+ + + ++ LF ++++ + ++ ++ ++ G+++ +++E+
Sbjct: 200 AYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEM 259
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K + DI YN+ I +D KF E+ DD V Y +++ + +
Sbjct: 260 KSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDD-VTYTSMIGVLCKGNR 318
Query: 166 LVNAESSTLVEAEKSITQRQWI----TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 221
L A VE + + Q + + Y+ +I+ G G+ K D+ + L K +
Sbjct: 319 LDEA-----VEIFEQMEQNRNVPCAYAYNTMIM---GYGSAGKFDEAYSLLERQKARGCI 370
Query: 222 RN---YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
+ Y CIL+ G L E ++ K+ A ++S N L+ G E A
Sbjct: 371 PSVIAYNCILTCLGKKGRLGEALRTFEEMKKDAAP--NLSTYNVLIDMLCKAGEVEAA 426
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 50/255 (19%), Positives = 97/255 (38%), Gaps = 10/255 (3%)
Query: 2 VTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSET--YTALLHLYAGAKW 59
+ HK + + + ID + K + R +E + S K YT+L+ +
Sbjct: 468 MNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGR 527
Query: 60 TEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNL 119
E ++F+ + S + + N M G+ K + EEIK + +PD+ +Y++
Sbjct: 528 KEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSI 587
Query: 120 WISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK 179
I + + M + G D Y ++ + + VN L E +
Sbjct: 588 LIHGLVKAGFARETYELFYAMK-EQGCVLDTHAYNTFIDGFCKSGK-VNKAYQLLEEMKT 645
Query: 180 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN---YICILSSYLMLGH 236
Q +TY +I GL D++D+ + K N Y ++ + +G
Sbjct: 646 KGRQPTVVTYGSVI---DGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGR 702
Query: 237 LKEVGEIIDQWKQSA 251
+ E I+++ Q
Sbjct: 703 IDEAYLIMEELMQKG 717
>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g31850, chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 109/252 (43%), Gaps = 7/252 (2%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
+ T +Y L+ +TEKA +LF+ +K + +A +N ++ ++ G++ ++
Sbjct: 785 SPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFE 844
Query: 101 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFL-DEMSCDSGGSDDWVKYVNLVNI 159
+ +E+ + PD TYN+ ISS A + N+D+ F D +S D + Y L++
Sbjct: 845 LYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPR--TYGPLIDG 902
Query: 160 YITASHLVNAESSTLVEAEKSI-TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQK 218
L E+ L E + ++ LI Y +G+ + Q++K + +
Sbjct: 903 LAKVGRL--EEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIR 960
Query: 219 MTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 278
++Y ++ + G + E ++ K + D D A NR++ E+A
Sbjct: 961 PDLKSYTILVDCLCLAGRVDEALYYFNELKSTGL-DPDFIAYNRIINGLGKSQRMEEALA 1019
Query: 279 FHMLLLQKNCAP 290
+ + + P
Sbjct: 1020 LYNEMRNRGIVP 1031
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 73/167 (43%), Gaps = 2/167 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+Y L+HL + + +A E++ R+ L + Y+ +M E V ++++E+
Sbjct: 194 SYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEM 253
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ + P+++T+ + I ID+ + M D G D V Y L++ A
Sbjct: 254 EDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMD-DEGCGPDLVTYTVLIDALCNAGQ 312
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 212
L NA+ V+ + + + + Y L+ + G+ D + W +
Sbjct: 313 LENAK-ELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQM 358
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 42/80 (52%)
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
+A+ +F ++++ L+ +++ YN MM Y VGQV++ ++ E+ R PD+ N
Sbjct: 489 REAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSL 548
Query: 121 ISSCAATLNIDQVKKFLDEM 140
I S +D+ + D M
Sbjct: 549 IDSLYKAGRVDEAWQMFDRM 568
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 56/116 (48%), Gaps = 1/116 (0%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
++YT L+ A ++A F +K + L + + YN ++ ++E+ + E
Sbjct: 964 KSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNE 1023
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
++ + +VPD++TYN + + ++Q K+ +E+ +G D Y L+ Y
Sbjct: 1024 MRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQL-AGLEPDVFTYNALIRGY 1078
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 47/248 (18%), Positives = 103/248 (41%), Gaps = 9/248 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT L+ A E A+ELF ++K + + ++Y ++ + G ++ ++
Sbjct: 299 TYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQM 358
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ +PD+ T+ + + + D+ D M G + Y L+ + A
Sbjct: 359 EADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMR-KQGILPNLHTYNTLICGLLRAGR 417
Query: 166 LVNAESSTLVEAEKSI-TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
+ +A L++ +S+ Q TY I + G K + ++ +M + +
Sbjct: 418 IEDA--LKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFE--KMKAKGIVPNIV 473
Query: 225 ICILSSYLM--LGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 282
C S Y + +G L+E + + +++ + D N ++ +S VG ++A
Sbjct: 474 ACNASLYSLAEMGRLREAKTMFNGLRENGLAP-DSVTYNMMMKCYSKVGQVDEAVNLLSE 532
Query: 283 LLQKNCAP 290
+++ C P
Sbjct: 533 MIRNGCEP 540
Score = 40.8 bits (94), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 79/185 (42%), Gaps = 7/185 (3%)
Query: 42 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 101
T+ TY + + + T KA E FE++K + N + N + +G++ + +
Sbjct: 435 PTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTM 494
Query: 102 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 161
++ + PD TYN+ + + +D+ L EM +G D + +L++
Sbjct: 495 FNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEM-IRNGCEPDVIVVNSLIDSLY 553
Query: 162 TASHLVNAESSTLVEAEKSIT-QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 220
A + E+ + + K + +TY+ L+ +GLG + ++ + + K
Sbjct: 554 KAGRV--DEAWQMFDRMKDMKLSPTVVTYNTLL---SGLGKEGRVQKAIELFESMIXKKC 608
Query: 221 SRNYI 225
S N I
Sbjct: 609 SPNTI 613
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 42/209 (20%), Positives = 85/209 (40%), Gaps = 4/209 (1%)
Query: 6 EFVLSDSDYATRIDLMTKVFGIHSGERYFEGLP--LSAKTSETYTALLHLYAGAKWTEKA 63
+F + Y ID + KV + R FE + + L++ Y TE A
Sbjct: 888 DFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETA 947
Query: 64 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 123
+LF+R+ + + Y ++ G+V++ E+K + PD YN I+
Sbjct: 948 CQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIING 1007
Query: 124 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQ 183
+ +++ +EM + G D Y +L+ + + + +V E + + +
Sbjct: 1008 LGKSQRMEEALALYNEMR-NRGIVPDLYTYNSLM-LNLGLAGMVEQAKRMYEELQLAGLE 1065
Query: 184 RQWITYDFLIILYAGLGNKDKIDQIWKSL 212
TY+ LI Y+ N + ++K++
Sbjct: 1066 PDVFTYNALIRGYSLSENPEHAYTVYKNM 1094
Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 49/112 (43%), Gaps = 1/112 (0%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y +++ ++ E+A L+ ++ + + YN +M G VE+ + EE++
Sbjct: 1001 YNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQ 1060
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 158
+ PD+FTYN I + + N + M D G + + Y L N
Sbjct: 1061 LAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVD-GCNPNIGTYAQLPN 1111
>gi|356557983|ref|XP_003547289.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Glycine max]
Length = 707
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 94/207 (45%), Gaps = 3/207 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T +A+++ YA + +KA L++R +A ++ ++ +Y G ++ + +E+
Sbjct: 242 TCSAMVYAYALSNNVDKAVSLYDRAIAEKWCLDAAAFSALIKMYSMAGNYDRCLKIYQEM 301
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K V P++ TYN + + Q K EM +G S D++ Y L+ +Y T +H
Sbjct: 302 KVLGVKPNVVTYNTLLGAMLKAEKHRQAKAIYKEMR-SNGVSPDFITYACLLEVY-TIAH 359
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ-KMTSRNY 224
E + + Y+ L+ +YA +G D+ +I+ + + + S +
Sbjct: 360 YSEDALGVYKEMKGNGMDMTADLYNKLLAMYADMGYIDRAVEIFYEMNSSGTCQPDSWTF 419
Query: 225 ICILSSYLMLGHLKEVGEIIDQWKQSA 251
+++ Y G + E ++++ QS
Sbjct: 420 ASLIAIYSRSGKVSEAEGMLNEMIQSG 446
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 101/249 (40%), Gaps = 18/249 (7%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y L L+ ++ E AE+LF+ + Q + N ++ M V K + E++
Sbjct: 179 YNVTLKLFRASRDFEGAEKLFDEMLQRGVKPNNFTFSTM------VNCANKPVELFEKMS 232
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
PD T + + + A + N+D+ D + D + L+ +Y A
Sbjct: 233 GFGYEPDGITCSAMVYAYALSNNVDKAVSLYDRAIAEK-WCLDAAAFSALIKMYSMAG-- 289
Query: 167 VNAESSTLVEAEKSI--TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 224
N + + E + + +TY+ L+ + I+K +R Y
Sbjct: 290 -NYDRCLKIYQEMKVLGVKPNVVTYNTLLGAMLKAEKHRQAKAIYKEMRSNGVSPDFITY 348
Query: 225 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISA--CNRLLGAFSDVGLTEKANE-FHM 281
C+L Y + H E + + +K+ + D++A N+LL ++D+G ++A E F+
Sbjct: 349 ACLLEVY-TIAHYSE--DALGVYKEMKGNGMDMTADLYNKLLAMYADMGYIDRAVEIFYE 405
Query: 282 LLLQKNCAP 290
+ C P
Sbjct: 406 MNSSGTCQP 414
>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Cucumis sativus]
Length = 904
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 80/197 (40%), Gaps = 35/197 (17%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT+++ + A +A ELFE + Q+ A YN M+ Y G+ E ++E
Sbjct: 307 TYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQ 366
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS-----------------CDSG--- 145
+RK +P + +YN +S +D+ K +EM C +G
Sbjct: 367 RRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIPNLSTYNIMIDMLCKAGKLE 426
Query: 146 -------GSDDWVKYVNLVNIYITASHLVNAE----SSTLVEAEKSITQRQ-WITYDFLI 193
D + N++ + I L A+ + ++ E T R +TY LI
Sbjct: 427 TALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLI 486
Query: 194 ILYAGLGNKDKIDQIWK 210
GLG ++D+ +K
Sbjct: 487 ---EGLGRHGRVDEAYK 500
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 107/238 (44%), Gaps = 18/238 (7%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
YT L+ + ++ ++ LF+++++ + N ++ ++ ++ G+V+ +++E+
Sbjct: 202 AYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEM 261
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K ++ PD+ YN+ I +D KF EM + DD V Y +++ + A
Sbjct: 262 KSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDD-VTYTSMIGVLCKADR 320
Query: 166 LVNAESSTLVEAEKSITQRQWI----TYDFLIILYAGLGNKDKIDQIWKSLRMTKQK--- 218
L A VE + + Q + + Y+ +I+ G G K + + L ++K
Sbjct: 321 LNEA-----VELFEHMDQNKQVPCAYAYNTMIM---GYGMAGKFEDAYSLLERQRRKGCI 372
Query: 219 MTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
+ +Y CILS G + E + ++ K+ A ++S N ++ G E A
Sbjct: 373 PSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIP--NLSTYNIMIDMLCKAGKLETA 428
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 59/118 (50%), Gaps = 2/118 (1%)
Query: 8 VLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEE 65
VL Y T ID K ++ + E + T TY +++ A ++A
Sbjct: 616 VLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYM 675
Query: 66 LFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 123
LFE K + N ++Y+ ++ + VG++++ L++EE+ +K + P+++T+N + +
Sbjct: 676 LFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDA 733
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 55/126 (43%), Gaps = 2/126 (1%)
Query: 16 TRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVKQS 73
T +D + K I G F+ + + +YT L+H A + +A ELF +K+
Sbjct: 554 TYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQ 613
Query: 74 NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQV 133
+ YN ++ + G+V K ++EE+K K P + TY I A +D+
Sbjct: 614 GCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEA 673
Query: 134 KKFLDE 139
+E
Sbjct: 674 YMLFEE 679
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 54/277 (19%), Positives = 112/277 (40%), Gaps = 9/277 (3%)
Query: 18 IDLMTKVFGIHSGERYFEGL--PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNL 75
+D + K + FEGL + TY +L+ ++A +L+E++ +N
Sbjct: 451 VDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQ 510
Query: 76 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKK 135
NA++Y ++ + G+ E + E+ R PD+ N ++ I++ +
Sbjct: 511 IPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRA 570
Query: 136 FLDEMSCDSGGSDDWVKYVNLVNIYITA--SHLVNAESSTLVEAEKSITQRQWITYDFLI 193
E+ + G D Y L++ + A +H T+ E + R Y+ +I
Sbjct: 571 LFQEIK-NLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTR---AYNTVI 626
Query: 194 ILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATS 253
+ G +K Q+ + ++ + T Y ++ + L E + ++ K S
Sbjct: 627 DGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK-SKGI 685
Query: 254 DFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
+ ++ + L+ F VG ++A L+QK P
Sbjct: 686 ELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTP 722
>gi|302759218|ref|XP_002963032.1| hypothetical protein SELMODRAFT_404554 [Selaginella moellendorffii]
gi|300169893|gb|EFJ36495.1| hypothetical protein SELMODRAFT_404554 [Selaginella moellendorffii]
Length = 1398
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 69/136 (50%), Gaps = 6/136 (4%)
Query: 36 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 95
G+P S S TY L+H+YA A+ ++ A EL+ +S L N ++YN ++ S G
Sbjct: 1019 GIPFS---SATYAILIHMYAKARDSKAAAELYADYLRSGLESNLIVYNNVILSNGSSGFP 1075
Query: 96 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 155
++ +I++ + PD FTY ISS A + Q +++ ++ G ++ N
Sbjct: 1076 GHAQNILGDIRKAGLAPDRFTYCTLISSWARAGAMLQARRWFNKACKTKAGPS--IEMCN 1133
Query: 156 -LVNIYITASHLVNAE 170
L++ Y+ A + A+
Sbjct: 1134 ALIDGYLKAREVEPAK 1149
>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
Length = 924
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 61/129 (47%), Gaps = 2/129 (1%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVK 71
Y T ID + K I E F+ + + TYT ++ A+ ++AE +F+++
Sbjct: 333 YNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMI 392
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
+ N YN ++ Y+S GQ E+V ++E+ ++ PD+FTY L + +
Sbjct: 393 DKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCN 452
Query: 132 QVKKFLDEM 140
+ + D M
Sbjct: 453 EARSLFDSM 461
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/248 (20%), Positives = 104/248 (41%), Gaps = 7/248 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY ++ A+ ++AE++F+++ + + N + YN ++ +V+ V +++
Sbjct: 227 TYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKM 286
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K V P TYN I +D+ + +M D G D V Y +++ A
Sbjct: 287 VDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQM-IDRGVKPDHVTYNTIIDGLCKAQA 345
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ AE +K + + +TY +I + D+ + +++ + K + Y
Sbjct: 346 IDKAEGVFQQMIDKGV-KPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYN 404
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDF--DISACNRLLGAFSDVGLTEKANEFHMLL 283
C++ YL G +EV + + K+ + D D+ LL G +A +
Sbjct: 405 CLIHGYLSTGQWEEV---VQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSM 461
Query: 284 LQKNCAPT 291
++K P+
Sbjct: 462 IRKGIKPS 469
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 69/159 (43%), Gaps = 5/159 (3%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLH-LYAGAKWTEKAEELFERV 70
Y T ID + K+ + F + T + +L++ L KW EK EELF +
Sbjct: 543 YGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKW-EKVEELFLEM 601
Query: 71 KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 130
+ + + +N ++ G+V + +++ + + PD+ +YN I +
Sbjct: 602 LNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRM 661
Query: 131 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 169
D+ K LD M +G + V Y L++ Y A + NA
Sbjct: 662 DEAVKLLDGMV-SAGLKPNIVSYNTLLHGYCKAGRIDNA 699
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 81/180 (45%), Gaps = 15/180 (8%)
Query: 68 ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAAT 127
E V +N+ FN+L+Y +V + EKV + E+ + + PDI +N + +
Sbjct: 569 EGVTPNNVVFNSLVYG-----LCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKE 623
Query: 128 LNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT-QRQW 186
+ + ++ +D M C G D + Y L++ + AS + E+ L++ S +
Sbjct: 624 GRVMEARRLIDSMVC-MGLKPDVISYNTLIDGHCFASRM--DEAVKLLDGMVSAGLKPNI 680
Query: 187 ITYDFLIILYAGLGNKDKIDQIWKSLR-MTKQKMTS--RNYICILSSYLMLGHLKEVGEI 243
++Y+ L+ Y G +ID + R M ++ +T Y IL+ G E E+
Sbjct: 681 VSYNTLLHGYCKAG---RIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEAREL 737
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 37/73 (50%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+Y L+ + A ++A +L + + + L N + YN ++ Y G+++ + E+
Sbjct: 647 SYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREM 706
Query: 106 KRKNVVPDIFTYN 118
RK V P + TYN
Sbjct: 707 LRKGVTPGVETYN 719
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 8/151 (5%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERV---KQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 102
+Y LL + E+A EL + + S+ S + + YN ++ + + GQV+K +
Sbjct: 157 SYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKAYSLF 216
Query: 103 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 162
E+ V PD+ TYN I +D+ + +M + G + V Y +++
Sbjct: 217 LEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMV-EKGVKPNNVTYNTIIDGLCK 272
Query: 163 ASHLVNAESSTLVEAEKSITQRQWITYDFLI 193
A + AE +K + +TY+ +I
Sbjct: 273 AQEVDMAEGVFQKMVDKGVKPSN-VTYNTII 302
>gi|255584218|ref|XP_002532847.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527384|gb|EEF29525.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 505
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 103/252 (40%), Gaps = 23/252 (9%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT L++ + + ELFE+++ + N YN M+ + + G++ K + +E+
Sbjct: 224 TYTVLINGFFKKGLRKDGFELFEKMQLDGVFPNLYTYNCMINEFCNEGKLHKAYELFDEM 283
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM---SCDSGGSDDWVKYVNLVNIYIT 162
++ VV ++ TYN IS I + +K +D+M +GG +WV +LV
Sbjct: 284 CKRGVVSNVVTYNTLISGLCRKTRIWEAEKLVDQMKRAGYSNGG--NWVDVTDLVR---- 337
Query: 163 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 222
E E+ +TY L + LG+ +K + S+
Sbjct: 338 -------------EMEERGISPSKVTYTILTNAHVRLGDMEKAFHFYSSMEKVGLVPDVH 384
Query: 223 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 282
Y +L + G++KE ++ + ++ N ++ + G + +A F
Sbjct: 385 IYGVLLHGLCVKGNMKEASKLFRSMAEMKLEPNEV-VYNTMINGYCKAGNSFRALRFLKE 443
Query: 283 LLQKNCAPTNAS 294
+ K P AS
Sbjct: 444 MEDKRLVPNVAS 455
>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g06920-like [Cucumis sativus]
Length = 904
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 80/197 (40%), Gaps = 35/197 (17%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT+++ + A +A ELFE + Q+ A YN M+ Y G+ E ++E
Sbjct: 307 TYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQ 366
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS-----------------CDSG--- 145
+RK +P + +YN +S +D+ K +EM C +G
Sbjct: 367 RRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIPNLSTYNIMIDMLCKAGKLE 426
Query: 146 -------GSDDWVKYVNLVNIYITASHLVNAE----SSTLVEAEKSITQRQ-WITYDFLI 193
D + N++ + I L A+ + ++ E T R +TY LI
Sbjct: 427 TALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLI 486
Query: 194 ILYAGLGNKDKIDQIWK 210
GLG ++D+ +K
Sbjct: 487 ---EGLGRHGRVDEAYK 500
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 106/238 (44%), Gaps = 18/238 (7%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
YT L+ + ++ ++ LF+++++ + N ++ ++ ++ G+V+ +++E+
Sbjct: 202 AYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEM 261
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K ++ PD+ YN+ I +D K EM + DD V Y +++ + A
Sbjct: 262 KSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDD-VTYTSMIGVLCKADR 320
Query: 166 LVNAESSTLVEAEKSITQRQWI----TYDFLIILYAGLGNKDKIDQIWKSLRMTKQK--- 218
L A VE + + Q + + Y+ +I+ G G K + + L ++K
Sbjct: 321 LNEA-----VELFEHMDQNKQVPCAYAYNTMIM---GYGMAGKFEDAYSLLERQRRKGCI 372
Query: 219 MTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
+ +Y CILS G + E + ++ K+ A ++S N ++ G E A
Sbjct: 373 PSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIP--NLSTYNIMIDMLCKAGKLETA 428
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 59/118 (50%), Gaps = 2/118 (1%)
Query: 8 VLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEE 65
VL Y T ID K ++ + E + T TY +++ A ++A
Sbjct: 616 VLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYM 675
Query: 66 LFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 123
LFE K + N ++Y+ ++ + VG++++ L++EE+ +K + P+++T+N + +
Sbjct: 676 LFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDA 733
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 55/126 (43%), Gaps = 2/126 (1%)
Query: 16 TRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVKQS 73
T +D + K I G F+ + + +YT L+H A + +A ELF +K+
Sbjct: 554 TYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQ 613
Query: 74 NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQV 133
+ YN ++ + G+V K ++EE+K K P + TY I A +D+
Sbjct: 614 GCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEA 673
Query: 134 KKFLDE 139
+E
Sbjct: 674 YMLFEE 679
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 54/277 (19%), Positives = 112/277 (40%), Gaps = 9/277 (3%)
Query: 18 IDLMTKVFGIHSGERYFEGL--PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNL 75
+D + K + FEGL + TY +L+ ++A +L+E++ +N
Sbjct: 451 VDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQ 510
Query: 76 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKK 135
NA++Y ++ + G+ E + E+ R PD+ N ++ I++ +
Sbjct: 511 IPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRA 570
Query: 136 FLDEMSCDSGGSDDWVKYVNLVNIYITA--SHLVNAESSTLVEAEKSITQRQWITYDFLI 193
E+ + G D Y L++ + A +H T+ E + R Y+ +I
Sbjct: 571 LFQEIK-NLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTR---AYNTVI 626
Query: 194 ILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATS 253
+ G +K Q+ + ++ + T Y ++ + L E + ++ K S
Sbjct: 627 DGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK-SKGI 685
Query: 254 DFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
+ ++ + L+ F VG ++A L+QK P
Sbjct: 686 ELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTP 722
>gi|359492929|ref|XP_002283907.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Vitis vinifera]
Length = 513
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 97/203 (47%), Gaps = 9/203 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFER-VKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
TY+ L++ G+ ++A ELFE V + + +AL YN ++ + +V++ ++E
Sbjct: 238 TYSTLINGLCGSGRLKEAIELFEEMVSKDQILPDALTYNALINGFCHGEKVDRALKIMEF 297
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+K+ P++F Y+ ++ +++ K+ DEM G D V Y L+N + A
Sbjct: 298 MKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEMK-SLGLKPDTVGYTTLINFFCRAG 356
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQ---IWKSLRMTKQKMTS 221
V+ L + ++ + +T++ ++ GL + + ++ + + L +
Sbjct: 357 R-VDEAMELLKDMRENKCRADTVTFN---VILGGLCREGRFEEARGMLERLPYEGVYLNK 412
Query: 222 RNYICILSSYLMLGHLKEVGEII 244
+Y +L+S G L++ +++
Sbjct: 413 ASYRIVLNSLCREGELQKATQLV 435
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 39/207 (18%), Positives = 87/207 (42%), Gaps = 3/207 (1%)
Query: 71 KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNV-VPDIFTYNLWISSCAATLN 129
K NL N ++N ++ + G ++ VVEE+K+ +V P++ TY+ I+ +
Sbjct: 192 KSLNLEPNTCIFNILVKHHCKNGDIDSAFEVVEEMKKSHVSYPNLITYSTLINGLCGSGR 251
Query: 130 IDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITY 189
+ + + +EM D + Y L+N + V+ + +K+ Y
Sbjct: 252 LKEAIELFEEMVSKDQILPDALTYNALINGFCHGEK-VDRALKIMEFMKKNGCNPNVFNY 310
Query: 190 DFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQ 249
L+ + G ++ +++ ++ K + Y +++ + G + E E++ ++
Sbjct: 311 SALMNGFCKEGRLEEAKEVFDEMKSLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMRE 370
Query: 250 SATSDFDISACNRLLGAFSDVGLTEKA 276
+ D N +LG G E+A
Sbjct: 371 NKCRA-DTVTFNVILGGLCREGRFEEA 396
>gi|358346363|ref|XP_003637238.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503173|gb|AES84376.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 663
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 105/231 (45%), Gaps = 20/231 (8%)
Query: 43 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 102
T T+ L+ Y+ ++ +K ++ E++ S L + +YN ++T++ +G K +V+
Sbjct: 379 TPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVL 438
Query: 103 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 162
+E+ ++ + D+ TYN I ++++ K +M D G + + Y L+ ++
Sbjct: 439 DEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVD-GIAPNITTYNTLLG-GLS 496
Query: 163 ASHLVNAESSTLVEAEKSITQRQWI----TYDFLIILYAGLGNKDK-----IDQIWKSLR 213
+ L+ + + +R + TYD L+ Y +GN+ K I+ I K
Sbjct: 497 NAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGF- 555
Query: 214 MTKQKMTSRNYICILSSYLMLGHLKEVGEIID----QWKQSATSDFDISAC 260
T + Y ++S Y G + E E+++ + + + +DI C
Sbjct: 556 ----VPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDILTC 602
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 95/212 (44%), Gaps = 3/212 (1%)
Query: 60 TEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNL 119
T++AEE+FE + + NL+ N + Y+ ++ Y +G++E LV++++++++V P++ T++
Sbjct: 96 TKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSS 155
Query: 120 WISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK 179
I+ A + + L EM + + Y L++ Y A + E +
Sbjct: 156 IINGYAKKGMLSKAVDVLREM-VQRNVMPNTIVYAILIDGYFKAGE-QDVADDFCKEMKS 213
Query: 180 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 239
+ + +D L+ +G D+ + + NY ++ Y G+
Sbjct: 214 RRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLA 273
Query: 240 VGEIIDQWKQSATSDFDISACNRLLGAFSDVG 271
I+ + K+ FD+ A N L+ +G
Sbjct: 274 ALSIVQEMKEKNIR-FDVVAYNALIKGLLRLG 304
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 59/127 (46%), Gaps = 2/127 (1%)
Query: 16 TRIDLMTKVFGIHSGERYFEG-LPLS-AKTSETYTALLHLYAGAKWTEKAEELFERVKQS 73
T +D + KV E FE L L+ A TY+ALL Y E AE + +++++
Sbjct: 85 TVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKE 144
Query: 74 NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQV 133
++ N + ++ ++ Y G + K V+ E+ ++NV+P+ Y + I D
Sbjct: 145 HVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVA 204
Query: 134 KKFLDEM 140
F EM
Sbjct: 205 DDFCKEM 211
>gi|168034142|ref|XP_001769572.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679114|gb|EDQ65565.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 1/127 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY AL+ Y + A LF+++K L N L Y+ ++ Y G + + E
Sbjct: 447 TYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSIFVEF 506
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
KR + PD+ Y+ I SC ++ L EM+ +G + V Y +L++ Y
Sbjct: 507 KRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMT-QAGIQPNIVTYNSLIDAYGRNGQ 565
Query: 166 LVNAESS 172
+ N E++
Sbjct: 566 VDNVEAA 572
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/241 (19%), Positives = 105/241 (43%), Gaps = 7/241 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+ +L+ + + E ++ +F +++ + + YN ++ GQ+E A ++ +
Sbjct: 307 TFNSLIAVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQMELAASIMSSM 366
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ KN+ P++ TY+ I ++ +M +SG D V Y L++IY
Sbjct: 367 RLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMK-ESGVRPDRVSYNTLIDIYAKLGR 425
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+A ++ + E+ + +TY+ LI Y G ++ ++ Y
Sbjct: 426 FDDALTAC-KDMERVGLKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYS 484
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 285
++ +Y G ++ I ++K++ D+ + L+ + GL E A ++LLQ
Sbjct: 485 ALIDAYSKAGMHQDATSIFVEFKRAGLKP-DVVLYSSLIDSCCKCGLVEDA----VVLLQ 539
Query: 286 K 286
+
Sbjct: 540 E 540
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 55/280 (19%), Positives = 109/280 (38%), Gaps = 37/280 (13%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL-VVEE 104
Y+A++ Y + +A ++F+ +K++ N + YN ++ G K AL + EE
Sbjct: 236 AYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLKKALDIFEE 295
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
++++ V PD T+N I+ C+ + ++ EM G D Y L++
Sbjct: 296 MQKEGVEPDRITFNSLIAVCSRGSLWEDSQRVFAEMQ-RRGIEQDIFTYNTLIDAVCKGG 354
Query: 165 HLVNAES-----------------STLVEA-----------------EKSITQRQWITYD 190
+ A S ST+++ ++S + ++Y+
Sbjct: 355 QMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYN 414
Query: 191 FLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQS 250
LI +YA LG D K + K Y ++ +Y G K+ + D+ K
Sbjct: 415 TLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAE 474
Query: 251 ATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
++ + L+ A+S G+ + A + + P
Sbjct: 475 GLVP-NVLTYSALIDAYSKAGMHQDATSIFVEFKRAGLKP 513
>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05670, mitochondrial-like [Cucumis sativus]
Length = 748
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 103/237 (43%), Gaps = 7/237 (2%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSE---TYTALLHLYAGAKWTEKAEELFERV 70
Y T I K+ + + ++F+ + LS K S TYT L+ + + + LF +
Sbjct: 366 YTTLIHGFFKLGHVRTANKWFDEM-LSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEM 424
Query: 71 KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 130
L + + Y ++ +Y G++ + E+ + + P+I TY I +
Sbjct: 425 ISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGEL 484
Query: 131 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 190
D + LDEM G + Y ++VN A ++ A + E E + ITY
Sbjct: 485 DTANELLDEMR-KKGLQLNVCIYNSMVNGICKAGNIEQA-IKLMKEMEVAGIDPDAITYT 542
Query: 191 FLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQW 247
+I Y LG+ DK ++ + + + T + +++ + MLG L++ G+ + W
Sbjct: 543 TVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLED-GDRLLGW 598
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 83/194 (42%), Gaps = 2/194 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY AL+ + A EL + +++ L N +YN M+ G +E+ +++E+
Sbjct: 470 TYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEM 529
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ + PD TY I + +ID+ K L EM D G V + L+N +
Sbjct: 530 EVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEM-LDRGLQPTVVTFNVLMNGFCMLGM 588
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
L + + EK I ITY+ L+ + + + +I+K +R S Y
Sbjct: 589 LEDGDRLLGWMLEKGIVP-DAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYN 647
Query: 226 CILSSYLMLGHLKE 239
++ + +LKE
Sbjct: 648 ILIKGHCKARNLKE 661
Score = 43.9 bits (102), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 54/280 (19%), Positives = 110/280 (39%), Gaps = 36/280 (12%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+Y+ ++ Y +KA +L + ++ L N YN ++ L +G+ + V+ E+
Sbjct: 295 SYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREM 354
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM-----SCD----------------- 143
+ ++PD Y I ++ K+ DEM S D
Sbjct: 355 MSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKV 414
Query: 144 ------------SGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 191
G D V Y L+++Y A +VNA S + +T +TY
Sbjct: 415 IEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTP-NIVTYGA 473
Query: 192 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 251
LI G D +++ +R ++ Y +++ G++++ +++ + + A
Sbjct: 474 LIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEM-EVA 532
Query: 252 TSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 291
D D ++ A+ +G +KA++ +L + PT
Sbjct: 533 GIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPT 572
>gi|297820044|ref|XP_002877905.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297323743|gb|EFH54164.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 439
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/280 (20%), Positives = 111/280 (39%), Gaps = 33/280 (11%)
Query: 23 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 82
K+F + + ++E +TYT L + K ++A LFE + L +Y
Sbjct: 79 KIFHLLRKQHWYE------PKCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVY 132
Query: 83 NEMMTLYMSVGQVEKVALVVEEIKR-KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 141
++ +Y ++K +E +K + PD+FT+ + I C D VK+ + EMS
Sbjct: 133 TSLIAVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLIRCCCKLGRFDLVKRIILEMS 192
Query: 142 CDSGGSDDWVKYVNLVNIYITASHLVNAE------------------------SSTLVEA 177
G V Y +++ Y A E SS +V
Sbjct: 193 YLGVGCST-VTYNTIIDGYGKAGMFEEMENVLADMIEDGDSLPDVFTLNSIIGSSEMVAH 251
Query: 178 EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHL 237
E+ T++ LI+ + G K+ + + +T+ Y ++ ++ G +
Sbjct: 252 EEDGELPDITTFNILILSFGKAGMYKKMSSVMDFMEKRFFSLTTVTYNIVIETFGKAGKI 311
Query: 238 KEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 277
+++ ++ + K IS C+ L+ A+S GL K +
Sbjct: 312 EKMDDVFRKMKYQGVKPNSISYCS-LVNAYSKAGLVGKID 350
>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/251 (20%), Positives = 107/251 (42%), Gaps = 5/251 (1%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
+ T +Y L+ +TEKA +LF+ +K + +A +N ++ ++ G++ ++
Sbjct: 785 SPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFE 844
Query: 101 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFL-DEMSCDSGGSDDWVKYVNLVNI 159
+ +E+ + PD TYN+ ISS A + N+D+ F D +S D + Y L++
Sbjct: 845 LYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPR--TYGPLIDG 902
Query: 160 YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 219
L A E + ++ LI Y +G+ + Q++K + +
Sbjct: 903 LAKVGRLEEA-MRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRP 961
Query: 220 TSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 279
++Y ++ + G + E ++ K + D D A NR++ E+A
Sbjct: 962 DLKSYTILVDCLCLAGRVDEALYYFNELKSTGL-DPDFIAYNRIINGLGKSQRMEEALAL 1020
Query: 280 HMLLLQKNCAP 290
+ + + P
Sbjct: 1021 YNEMRNRGIVP 1031
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 73/167 (43%), Gaps = 2/167 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+Y L+HL + + +A E++ R+ L + Y+ +M E V ++++E+
Sbjct: 194 SYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEM 253
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ + P+++T+ + I ID+ + M D G D V Y L++ A
Sbjct: 254 EDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMD-DEGCGPDLVTYTVLIDALCNAGQ 312
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 212
L NA+ V+ + + + + Y L+ + G+ D + W +
Sbjct: 313 LENAK-ELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQM 358
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 42/80 (52%)
Query: 61 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 120
+A+ +F ++++ L+ +++ YN MM Y VGQV++ ++ E+ R PD+ N
Sbjct: 489 REAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSL 548
Query: 121 ISSCAATLNIDQVKKFLDEM 140
I S +D+ + D M
Sbjct: 549 IDSLYKAGRVDEAWQMFDRM 568
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 47/247 (19%), Positives = 100/247 (40%), Gaps = 7/247 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT L+ A E A+ELF ++K + + ++Y ++ + G ++ ++
Sbjct: 299 TYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQM 358
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ +PD+ T+ + + + D+ D M G + Y L+ + A
Sbjct: 359 EADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMR-KQGILPNLHTYNTLICGLLRAGR 417
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ +A L E Q TY+ I + G K + ++ +M + +
Sbjct: 418 IEDA-LKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFE--KMKAKGIVPNIVA 474
Query: 226 CILSSYLM--LGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 283
C S Y + +G L+E + + +++ + D N ++ +S VG ++A +
Sbjct: 475 CNASLYSLAEMGRLREAKTMFNGLRENGLAP-DSVTYNMMMKCYSKVGQVDEAVNLLSEM 533
Query: 284 LQKNCAP 290
++ C P
Sbjct: 534 IRNGCEP 540
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 56/116 (48%), Gaps = 1/116 (0%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
++YT L+ A ++A F +K + L + + YN ++ ++E+ + E
Sbjct: 964 KSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNE 1023
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
++ + +VPD++TYN + + ++Q K+ +E+ +G D Y L+ Y
Sbjct: 1024 MRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQL-AGLEPDVFTYNALIRGY 1078
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 80/185 (43%), Gaps = 7/185 (3%)
Query: 42 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 101
T+ TY + + + T KA E FE++K + N + N + +G++ + +
Sbjct: 435 PTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTM 494
Query: 102 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 161
++ + PD TYN+ + + +D+ L EM +G D + +L++
Sbjct: 495 FNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEM-IRNGCEPDVIVVNSLIDSLY 553
Query: 162 TASHLVNAESSTLVEAEKSIT-QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 220
A + E+ + + K + +TY+ L+ +GLG + ++ + + +K
Sbjct: 554 KAGRV--DEAWQMFDRMKDMKLSPTVVTYNTLL---SGLGKEGRVQKAIELFESMIEKKC 608
Query: 221 SRNYI 225
S N I
Sbjct: 609 SPNTI 613
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 42/209 (20%), Positives = 85/209 (40%), Gaps = 4/209 (1%)
Query: 6 EFVLSDSDYATRIDLMTKVFGIHSGERYFEGLP--LSAKTSETYTALLHLYAGAKWTEKA 63
+F + Y ID + KV + R FE + + L++ Y TE A
Sbjct: 888 DFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETA 947
Query: 64 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 123
+LF+R+ + + Y ++ G+V++ E+K + PD YN I+
Sbjct: 948 CQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIING 1007
Query: 124 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQ 183
+ +++ +EM + G D Y +L+ + + + +V E + + +
Sbjct: 1008 LGKSQRMEEALALYNEMR-NRGIVPDLYTYNSLM-LNLGLAGMVEQAKRMYEELQLAGLE 1065
Query: 184 RQWITYDFLIILYAGLGNKDKIDQIWKSL 212
TY+ LI Y+ N + ++K++
Sbjct: 1066 PDVFTYNALIRGYSLSENPEHAYTVYKNM 1094
Score = 37.7 bits (86), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 49/112 (43%), Gaps = 1/112 (0%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y +++ ++ E+A L+ ++ + + YN +M G VE+ + EE++
Sbjct: 1001 YNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQ 1060
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 158
+ PD+FTYN I + + N + M D G + + Y L N
Sbjct: 1061 LAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVD-GCNPNIGTYAQLPN 1111
>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 1032
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 59/112 (52%), Gaps = 1/112 (0%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y +L+ + EKA +L++ + + ++ N ++YN ++ +G+V K + +EI+
Sbjct: 664 YNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIE 723
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 158
K++VPD+ TY+ I + N+ + K DEM G S D Y L++
Sbjct: 724 EKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEM-ISKGISPDGYIYCILID 774
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 100/245 (40%), Gaps = 3/245 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY+ L+ + +KA E+ +++ ++ + N MY ++ Y+ + E +++ +
Sbjct: 453 TYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIM 512
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
V+PD+F YN I +++ K L +M + G + Y +N+Y +
Sbjct: 513 IANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMG-EKGIKPNAHTYGAFINLYSKSGE 571
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ AE I I Y LI + +GN + +K + R Y
Sbjct: 572 IQVAERYFKDMLSSGIVPNNVI-YTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYS 630
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 285
I+ S G KE + ++ ++ D+ N L+ F G EKA++ + +L
Sbjct: 631 AIIHSLSKNGKTKEAMGVFLKFLKTGVVP-DVFLYNSLISGFCKEGDIEKASQLYDEMLH 689
Query: 286 KNCAP 290
P
Sbjct: 690 NGINP 694
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/248 (18%), Positives = 105/248 (42%), Gaps = 8/248 (3%)
Query: 45 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
Y+A++H + T++A +F + ++ + + +YN +++ + G +EK + + +E
Sbjct: 627 RAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDE 686
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+ + P+I YN I+ + + ++ DE+ + D V Y +++ Y +
Sbjct: 687 MLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIE-EKDLVPDVVTYSTIIDGYCKSG 745
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS--R 222
+L A K I+ +I IL G G + +++ +QK
Sbjct: 746 NLTEAFKLFDEMISKGISPDGYI----YCILIDGCGKEGNLEKALSLFHEAQQKSVGSLS 801
Query: 223 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 282
+ ++ S+ G + E E+ D + +I L+ A+ + E+A + +
Sbjct: 802 AFNSLIDSFCKHGKVIEARELFDDMVDKKLTP-NIVTYTILIDAYGKAEMMEEAEQLFLD 860
Query: 283 LLQKNCAP 290
+ +N P
Sbjct: 861 METRNIIP 868
Score = 45.1 bits (105), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY A++ A A KA LF + + L + YN ++ Y+ + K ++ E+
Sbjct: 383 TYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEM 442
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K + + P FTY++ IS + ++ + + LD+M +G + Y L+ Y+ S
Sbjct: 443 KARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQM-IRNGVKPNVFMYGTLIKAYVQESR 501
Score = 44.7 bits (104), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 65/148 (43%), Gaps = 2/148 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TYT L+ + K +++A+ +FE + S L+ N Y ++ ++ G +E+ + +E+
Sbjct: 313 TYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEM 372
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ + ++ TYN I A + + +EM D W Y L++ Y+ SH
Sbjct: 373 ITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWT-YNLLIDGYL-KSH 430
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLI 193
+ L E + TY LI
Sbjct: 431 DMAKACELLAEMKARKLTPSPFTYSVLI 458
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 92/234 (39%), Gaps = 34/234 (14%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
Y L++ KA ELF+ +++ +L + + Y+ ++ Y G + + + +E+
Sbjct: 698 VYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEM 757
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGS------------------ 147
K + PD + Y + I C N+++ E S GS
Sbjct: 758 ISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVI 817
Query: 148 ------DDWVK---------YVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFL 192
DD V Y L++ Y A + AE L ++I +TY L
Sbjct: 818 EARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNT-LTYTSL 876
Query: 193 IILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 246
++ Y +GN+ K+ ++K + + Y + S+Y G E +++++
Sbjct: 877 LLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNK 930
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 110/284 (38%), Gaps = 43/284 (15%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
+ TY A ++LY+ + + AE F+ + S + N ++Y ++ + VG + +
Sbjct: 556 AHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFK 615
Query: 104 EIKRKNVVPDI-----------------------------------FTYNLWISSCAATL 128
+ K ++PDI F YN IS
Sbjct: 616 CMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEG 675
Query: 129 NIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWIT 188
+I++ + DEM +G + + V Y L+N + A E E+ +T
Sbjct: 676 DIEKASQLYDEM-LHNGINPNIVVYNTLINGLCKLGEVTKAR-ELFDEIEEKDLVPDVVT 733
Query: 189 YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI-CIL-SSYLMLGHLKEVGEIIDQ 246
Y +I Y GN + +++ M + ++ YI CIL G+L++ + +
Sbjct: 734 YSTIIDGYCKSGNLTEAFKLFD--EMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHE 791
Query: 247 WKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
+Q + +SA N L+ +F G +A E ++ K P
Sbjct: 792 AQQKSVG--SLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTP 833
Score = 37.0 bits (84), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 75/166 (45%), Gaps = 17/166 (10%)
Query: 82 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID---QVKKFLD 138
Y ++ + VG V K +V+ E++ K P++FTYN +I T +D +VKK +
Sbjct: 245 YTNVIKAHCKVGDVIKGKMVLSEME-KECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMM 303
Query: 139 EMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA-EKSITQRQWITYDFLIILYA 197
E G D Y LV+ + + E+ + E+ S TY LI +
Sbjct: 304 E----KGLGPDGHTYTLLVDGFCKQKR--SKEAKLIFESMPSSGLNPNRFTYTALIDGFI 357
Query: 198 GLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI 243
GN I ++LR+ + +T + +++ M+G + + GE+
Sbjct: 358 KEGN------IEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEM 397
>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 748
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 103/237 (43%), Gaps = 7/237 (2%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSE---TYTALLHLYAGAKWTEKAEELFERV 70
Y T I K+ + + ++F+ + LS K S TYT L+ + + + LF +
Sbjct: 366 YTTLIHGFFKLGHVRTANKWFDEM-LSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEM 424
Query: 71 KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 130
L + + Y ++ +Y G++ + E+ + + P+I TY I +
Sbjct: 425 ISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGEL 484
Query: 131 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 190
D + LDEM G + Y ++VN A ++ A + E E + ITY
Sbjct: 485 DTANELLDEMR-KKGLQLNVCIYNSMVNGICKAGNIEQA-IKLMKEMEVAGIDPDAITYT 542
Query: 191 FLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQW 247
+I Y LG+ DK ++ + + + T + +++ + MLG L++ G+ + W
Sbjct: 543 TVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLED-GDRLLGW 598
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 83/194 (42%), Gaps = 2/194 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY AL+ + A EL + +++ L N +YN M+ G +E+ +++E+
Sbjct: 470 TYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEM 529
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ + PD TY I + +ID+ K L EM D G V + L+N +
Sbjct: 530 EVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEM-LDRGLQPTVVTFNVLMNGFCMLGM 588
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
L + + EK I ITY+ L+ + + + +I+K +R S Y
Sbjct: 589 LEDGDRLLGWMLEKGIVP-DAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYN 647
Query: 226 CILSSYLMLGHLKE 239
++ + +LKE
Sbjct: 648 ILIKGHCKARNLKE 661
Score = 43.9 bits (102), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 54/280 (19%), Positives = 110/280 (39%), Gaps = 36/280 (12%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+Y+ ++ Y +KA +L + ++ L N YN ++ L +G+ + V+ E+
Sbjct: 295 SYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREM 354
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM-----SCD----------------- 143
+ ++PD Y I ++ K+ DEM S D
Sbjct: 355 MSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKV 414
Query: 144 ------------SGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 191
G D V Y L+++Y A +VNA S + +T +TY
Sbjct: 415 IEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTP-NIVTYGA 473
Query: 192 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 251
LI G D +++ +R ++ Y +++ G++++ +++ + + A
Sbjct: 474 LIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEM-EVA 532
Query: 252 TSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 291
D D ++ A+ +G +KA++ +L + PT
Sbjct: 533 GIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPT 572
>gi|357499677|ref|XP_003620127.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495142|gb|AES76345.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 412
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 88/206 (42%), Gaps = 2/206 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY++L+ Y A+ +F + ++ N YN M+ + + ++ + EE+
Sbjct: 172 TYSSLMDGYCLVNEVNNAKGIFSTMSLRGVTANVWSYNIMINGFCKIKMTDEAMNLFEEM 231
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ ++PD+ TYN I+ + I K +DEM D G D + Y +L++ + +H
Sbjct: 232 HCRKLIPDVVTYNSLINGLCKSGKISYALKLVDEMH-DRGQPPDIITYSSLLDA-LCKNH 289
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
V+ + L + + TY LI G + I++ L + +T Y
Sbjct: 290 QVDKAIALLKNLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYT 349
Query: 226 CILSSYLMLGHLKEVGEIIDQWKQSA 251
++ + G E ++ + K ++
Sbjct: 350 VMIHGFCNKGLFDEALALLSKMKDNS 375
>gi|255661162|gb|ACU25750.1| pentatricopeptide repeat-containing protein [Glandularia flava]
Length = 426
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 105/247 (42%), Gaps = 15/247 (6%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+Y LL +Y A+ +A LF +++ N+ N + YN MM +Y + EK +++E+
Sbjct: 186 SYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEM 245
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ + + P+ TY+ IS +D+ ++ SG D V Y ++ Y A
Sbjct: 246 QNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRS-SGVDIDQVLYQTMIVAYERAG- 303
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKS---LRMTKQKMTSR 222
LV L E ++ I D I + AG G ++ +++ K
Sbjct: 304 LVAHAKRLLHELKRPDN----IPRDIAIHILAGAGRXEEATWVFRQAIDAGEVKDITVFE 359
Query: 223 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDF-DISACNRLLGAFSDVGLTEKANEFHM 281
I + S Y G++ EV + K F D + +L A+ + +KAN+ +M
Sbjct: 360 RMIHLFSKYKKYGNVVEVFD-----KMRGLGYFPDSNVIALVLNAYGKLHEFDKANDVYM 414
Query: 282 LLLQKNC 288
+ + C
Sbjct: 415 EMQEVGC 421
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 45/249 (18%), Positives = 99/249 (39%), Gaps = 7/249 (2%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY+ L+ + + A ++++Q + + ++Y+ ++ L + K + +
Sbjct: 11 TYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRL 70
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
KR PD+ YN I+ + + + EM +G + + Y L+ +Y+
Sbjct: 71 KRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRT-AGVTPNTASYSTLLTMYVENKK 129
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
+ A S E + T + +I +Y LG + D+++ +R + +Y
Sbjct: 130 FLEA-LSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYN 188
Query: 226 CILSSYLMLGHLKEVGEIIDQWK--QSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 283
+L Y G + GE I ++ Q + ++ N ++ + EKAN +
Sbjct: 189 TLLRVY---GDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEM 245
Query: 284 LQKNCAPTN 292
+ P +
Sbjct: 246 QNRGIEPNS 254
Score = 37.7 bits (86), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 16/69 (23%), Positives = 37/69 (53%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
S TY+ ++ ++ ++A LF++++ S + + ++Y M+ Y G V ++
Sbjct: 254 SITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLH 313
Query: 104 EIKRKNVVP 112
E+KR + +P
Sbjct: 314 ELKRPDNIP 322
>gi|413924892|gb|AFW64824.1| hypothetical protein ZEAMMB73_716034 [Zea mays]
Length = 721
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 88/207 (42%), Gaps = 16/207 (7%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY +LL+ Y A ++A L ++++ L+ L YN ++ Y +G + + + EE+
Sbjct: 380 TYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEM 439
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ PD+ TY + ++ N+ ++F DEM G D Y + +T S
Sbjct: 440 VEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEM-LSKGLQPDCFAYNTRICAELTLSS 498
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN-- 223
A V K I +TY+ +I GN K + K KM S
Sbjct: 499 TPMAFQLREVMMLKGIYP-DTVTYNVIIDGLCKTGN-------LKDAKRLKTKMVSDGLQ 550
Query: 224 -----YICILSSYLMLGHLKEVGEIID 245
Y C++ ++ G L+E ++++
Sbjct: 551 PDCITYTCLIHAHCERGLLREARKLLN 577
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 54/117 (46%), Gaps = 1/117 (0%)
Query: 42 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 101
T TY A++H + E A+ F ++ L + + YN ++ Y G +++ +
Sbjct: 341 PTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWL 400
Query: 102 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 158
+ +++R + P + TYN I ++ + ++ +EM + G D Y L+N
Sbjct: 401 LGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEM-VEQGCFPDVCTYTILMN 456
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 33/165 (20%), Positives = 68/165 (41%), Gaps = 2/165 (1%)
Query: 7 FVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSE-TYTALLHLYAGAKWTEKAEE 65
F L+D + I + + + + + + + LS K S TY L+ + KAE
Sbjct: 270 FSLNDVTFNVVISFLAREGHLENAVKLVDSMRLSKKASSFTYNPLITALLERGFVRKAEA 329
Query: 66 LFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCA 125
L ++ + + YN ++ + Q E + E++ ++PD+ TYN ++
Sbjct: 330 LQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYC 389
Query: 126 ATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAE 170
N+ + L ++ +G + + Y L++ Y L A
Sbjct: 390 KAGNLKEALWLLGDLR-RAGLAPTVLTYNTLIDGYCRLGDLAEAR 433
>gi|358346655|ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503316|gb|AES84519.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1023
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/228 (20%), Positives = 103/228 (45%), Gaps = 10/228 (4%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
T T+ L+ Y+ ++ +K ++ E++ S L + +YN ++T++ +G K +
Sbjct: 737 VPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKV 796
Query: 101 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
V++E+ ++ + D+ TYN I ++++ K +M D G + + Y L+
Sbjct: 797 VLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVD-GIAPNITTYNTLLG-G 854
Query: 161 ITASHLVNAESSTLVEAEKSITQRQWI----TYDFLIILYAGLGNKDKIDQIWKSLRMTK 216
++ + L+ + + +R + TYD L+ Y +GN+ K + +
Sbjct: 855 LSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKG 914
Query: 217 QKMTSRNYICILSSYLMLGHLKEVGEIID----QWKQSATSDFDISAC 260
T + Y ++S Y G + E E+++ + + + +DI C
Sbjct: 915 FVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDILTC 962
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 117/299 (39%), Gaps = 43/299 (14%)
Query: 16 TRIDLMTKVFGIHSGERYFEG-LPLS-AKTSETYTALLHLYAGAKWTEKAEELFERVKQS 73
T +D + KV E FE L L+ A TY+ALL Y E AE + +++++
Sbjct: 431 TVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKE 490
Query: 74 NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQV 133
++ N + ++ ++ Y G + K V+ E+ ++NV+P+ Y + I D
Sbjct: 491 HVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVA 550
Query: 134 KKFLDEMSC----------------------------------DSGGSDDWVKYVNLVNI 159
F EM G D V Y +L++
Sbjct: 551 DDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDG 610
Query: 160 YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 219
Y + + A S EK+I + + Y+ LI GL K D + RM + +
Sbjct: 611 YFKEGNQLAALSIVQEMKEKNI-RFDVVAYNALI---KGLLRLGKYDPRYVCSRMIELGL 666
Query: 220 TSR--NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
Y I+++Y + G ++ +I+++ K ++ N L+G G EKA
Sbjct: 667 APDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTY-NILIGGLCKTGAVEKA 724
Score = 44.3 bits (103), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 45/222 (20%), Positives = 90/222 (40%), Gaps = 38/222 (17%)
Query: 69 RVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATL 128
R+ + L+ + + YN ++ Y G+ E ++ E+K ++P+ TYN+ I T
Sbjct: 660 RMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTG 719
Query: 129 NIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWIT 188
+++ + LDEM LV ++ IT
Sbjct: 720 AVEKAESALDEM---------------LVMEFVPTP----------------------IT 742
Query: 189 YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK 248
+ FL+ Y+ DKI QI + L + +++ Y +++ + LG ++ ++D+
Sbjct: 743 HKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMV 802
Query: 249 QSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
+ S D+ N L+ + EKA + + + AP
Sbjct: 803 KRGISA-DLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAP 843
>gi|449439735|ref|XP_004137641.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
gi|449514868|ref|XP_004164502.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
Length = 601
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 86/203 (42%), Gaps = 9/203 (4%)
Query: 41 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 100
A S+ T+L+HLY EKAE++F + +L+ ++ MM Y G EK
Sbjct: 390 ASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLA----AWSSMMNGYAVHGMGEKTMN 445
Query: 101 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
+ E++R + PD Y + +C+ + ++ + M D G V Y LV+I
Sbjct: 446 LFHEMQRSGIKPDGSVYASILLACSHSGLVEDGLEHFKNMQLDYGIVPTMVHYTCLVDIL 505
Query: 161 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 220
A HL A +T+ E + W + Y + ++ ++ ++
Sbjct: 506 SRAGHLELAL-NTIQEMPTQFQSQAWAPFLSACRTYCDV----ELGEVANRCLLSSNPRN 560
Query: 221 SRNYICILSSYLMLGHLKEVGEI 243
N++ + + Y +G KE ++
Sbjct: 561 PVNHVLMANLYTSMGKWKEAAKV 583
>gi|10140738|gb|AAG13570.1|AC037425_1 putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
Length = 811
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 85/183 (46%), Gaps = 3/183 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T++ L+H E+A +LFERV + + + YN ++ Y +G +++ +++ +
Sbjct: 291 TFSTLIHGLCKVGSMEEALDLFERVTKEGMELEIVTYNSLINGYRLLGLTKEIPKIIQMM 350
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ + V PD+ TY + I+ + ++++ K ++ D G + V Y L+N
Sbjct: 351 RGQGVEPDLVTYTILIAGHCESGDVEEGMKVRKDV-LDQGLQLNIVTYSVLLNALFKKGM 409
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM-TSRNY 224
+ + L E I Y LI Y LG +K Q+ ++ +++ M TS N+
Sbjct: 410 FCEID-NLLGEIYNIGLDMDVIAYSILIHGYCKLGEIEKALQVCNAMCSSQRVMPTSLNH 468
Query: 225 ICI 227
I
Sbjct: 469 FSI 471
Score = 44.3 bits (103), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 111/257 (43%), Gaps = 11/257 (4%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVK 71
Y ID K+ I + R ++ + ++ T T +LL+ Y + AE F ++
Sbjct: 503 YNVVIDGYAKLGDIVNAVRLYDQITVAGMHPTIVTCNSLLYGYCKIGDLQLAESYFRAIQ 562
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
S L A+ Y +M G+V + + +E+ K + + TY++ + L D
Sbjct: 563 LSGLLPTAVTYTTLMDALSEAGEVNTMLSLFDEMVAKRIKANAVTYSVIVKGLCKQLRFD 622
Query: 132 QVKKFLDEMSCDSGGSD-DWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 190
+ L +M DS G + D + Y L+ + + ++ A + + + +TY+
Sbjct: 623 EAINVLKDM--DSKGINADPITYNTLIQGFCESENVQMAFHIHDIMLCRGLVPTP-VTYN 679
Query: 191 FLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLG----HLKEVGEIIDQ 246
LI + G + + + +SLR K+ Y ++ + G + VG+++D
Sbjct: 680 LLINVLCLKGKVIQAEILLESLRENGIKLRKFAYTTLIKAQCAKGMPINAVLLVGKLLDA 739
Query: 247 WKQSATSDFDISACNRL 263
+++ DF +A NRL
Sbjct: 740 GFEASIEDFS-AAINRL 755
>gi|297610666|ref|NP_001064867.2| Os10g0479200 [Oryza sativa Japonica Group]
gi|255679497|dbj|BAF26781.2| Os10g0479200 [Oryza sativa Japonica Group]
Length = 818
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 85/183 (46%), Gaps = 3/183 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T++ L+H E+A +LFERV + + + YN ++ Y +G +++ +++ +
Sbjct: 291 TFSTLIHGLCKVGSMEEALDLFERVTKEGMELEIVTYNSLINGYRLLGLTKEIPKIIQMM 350
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ + V PD+ TY + I+ + ++++ K ++ D G + V Y L+N
Sbjct: 351 RGQGVEPDLVTYTILIAGHCESGDVEEGMKVRKDV-LDQGLQLNIVTYSVLLNALFKKGM 409
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM-TSRNY 224
+ + L E I Y LI Y LG +K Q+ ++ +++ M TS N+
Sbjct: 410 FCEID-NLLGEIYNIGLDMDVIAYSILIHGYCKLGEIEKALQVCNAMCSSQRVMPTSLNH 468
Query: 225 ICI 227
I
Sbjct: 469 FSI 471
Score = 44.3 bits (103), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 111/257 (43%), Gaps = 11/257 (4%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVK 71
Y ID K+ I + R ++ + ++ T T +LL+ Y + AE F ++
Sbjct: 503 YNVVIDGYAKLGDIVNAVRLYDQITVAGMHPTIVTCNSLLYGYCKIGDLQLAESYFRAIQ 562
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
S L A+ Y +M G+V + + +E+ K + + TY++ + L D
Sbjct: 563 LSGLLPTAVTYTTLMDALSEAGEVNTMLSLFDEMVAKRIKANAVTYSVIVKGLCKQLRFD 622
Query: 132 QVKKFLDEMSCDSGGSD-DWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 190
+ L +M DS G + D + Y L+ + + ++ A + + + +TY+
Sbjct: 623 EAINVLKDM--DSKGINADPITYNTLIQGFCESENVQMAFHIHDIMLCRGLVPTP-VTYN 679
Query: 191 FLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLG----HLKEVGEIIDQ 246
LI + G + + + +SLR K+ Y ++ + G + VG+++D
Sbjct: 680 LLINVLCLKGKVIQAEILLESLRENGIKLRKFAYTTLIKAQCAKGMPINAVLLVGKLLDA 739
Query: 247 WKQSATSDFDISACNRL 263
+++ DF +A NRL
Sbjct: 740 GFEASIEDFS-AAINRL 755
>gi|225438599|ref|XP_002276540.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic [Vitis vinifera]
gi|296082481|emb|CBI21486.3| unnamed protein product [Vitis vinifera]
Length = 489
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 101/227 (44%), Gaps = 20/227 (8%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY LL +A A+ +A LF+ + +S +S + +N +M Y G ++++ V+ +
Sbjct: 211 TYNILLRAFAQAQNVNQANALFKELNESIVSPDIFTFNGVMDAYGKNGMIKEMESVLSRM 270
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K PDI T+N+ I S D++++ + ++ + S
Sbjct: 271 KSNQCKPDIITFNVLIDSYGRRQEFDKMEQVFKSL----------LRSKEKPTLPTFNSM 320
Query: 166 LVNAESSTLVEAEKSITQR--------QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 217
+ N + L E +++ ++ +ITY+ LI++Y + +I+ + +K+
Sbjct: 321 ITNYGKARLKEKAENVFKKMTDMGYAPNFITYESLIMMYGFCDCISRAREIFDEMMASKK 380
Query: 218 KMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLL 264
+M +L Y M G E ++++ +++ F S+ +LL
Sbjct: 381 EMKVSTLNAMLEVYCMNGLPMEADLLLERARKN--RPFPGSSTYKLL 425
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 106/249 (42%), Gaps = 26/249 (10%)
Query: 48 TALLHLYAGAKWTEKAEELFERVK-QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
TA LH +K KA F+++K N + YN ++ + V + + +E+
Sbjct: 177 TAHLHSRDKSKALIKALGYFDKMKGMERCKPNIVTYNILLRAFAQAQNVNQANALFKELN 236
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
V PDIFT+N + + I +++ L M + D + + L++ Y
Sbjct: 237 ESIVSPDIFTFNGVMDAYGKNGMIKEMESVLSRMKSNQ-CKPDIITFNVLIDSYGRRQEF 295
Query: 167 VNAES--STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT---- 220
E +L+ +++ T T++ +I Y K+K + ++K KMT
Sbjct: 296 DKMEQVFKSLLRSKEKPT---LPTFNSMITNYGKARLKEKAENVFK-------KMTDMGY 345
Query: 221 SRNYICILSSYLMLGH---LKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 277
+ N+I S +M G + EI D+ ++ + +S N +L + GL +A+
Sbjct: 346 APNFITYESLIMMYGFCDCISRAREIFDEM-MASKKEMKVSTLNAMLEVYCMNGLPMEAD 404
Query: 278 EFHMLLLQK 286
LLL++
Sbjct: 405 ----LLLER 409
>gi|357467093|ref|XP_003603831.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492879|gb|AES74082.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 530
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 81/191 (42%), Gaps = 2/191 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY+ ++ +A ++F + + NA+ +N +M +++ G+ EKV V ++
Sbjct: 284 TYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLQVYNQM 343
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
KR D +YN I S N+D+ K LD M G N + I H
Sbjct: 344 KRLGCAADTISYNFLIESHCKDENLDEAVKVLDTMV--KKGVAPNASTFNSIFGCIAELH 401
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 225
VN + ++ +TY+ L+ ++A + D + ++ K + ++ + Y
Sbjct: 402 DVNGAHRMYAKMKELKCMPNTLTYNILMRMFADSKSIDMVLKLKKEMDESEVEPNVNTYR 461
Query: 226 CILSSYLMLGH 236
++ + GH
Sbjct: 462 ILILMFCEKGH 472
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 23/106 (21%), Positives = 50/106 (47%), Gaps = 2/106 (1%)
Query: 58 KWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTY 117
+ +AE F+ +K + ++Y ++ + G + K V ++K V P+++TY
Sbjct: 227 RRASEAELFFDSLKHK-FEPDVIVYTSLVHGWCRAGDIAKAEEVFSDMKEAGVKPNVYTY 285
Query: 118 NLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 163
++ I S I + EM D+G + V + +L+ +++ A
Sbjct: 286 SIVIDSLCRCGQITRAHDVFSEM-IDAGCDPNAVTFNSLMRVHVKA 330
>gi|110289270|gb|ABG66143.1| expressed protein [Oryza sativa Japonica Group]
gi|125575153|gb|EAZ16437.1| hypothetical protein OsJ_31906 [Oryza sativa Japonica Group]
Length = 829
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 85/183 (46%), Gaps = 3/183 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T++ L+H E+A +LFERV + + + YN ++ Y +G +++ +++ +
Sbjct: 309 TFSTLIHGLCKVGSMEEALDLFERVTKEGMELEIVTYNSLINGYRLLGLTKEIPKIIQMM 368
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ + V PD+ TY + I+ + ++++ K ++ D G + V Y L+N
Sbjct: 369 RGQGVEPDLVTYTILIAGHCESGDVEEGMKVRKDV-LDQGLQLNIVTYSVLLNALFKKGM 427
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM-TSRNY 224
+ + L E I Y LI Y LG +K Q+ ++ +++ M TS N+
Sbjct: 428 FCEID-NLLGEIYNIGLDMDVIAYSILIHGYCKLGEIEKALQVCNAMCSSQRVMPTSLNH 486
Query: 225 ICI 227
I
Sbjct: 487 FSI 489
Score = 44.3 bits (103), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 111/257 (43%), Gaps = 11/257 (4%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVK 71
Y ID K+ I + R ++ + ++ T T +LL+ Y + AE F ++
Sbjct: 521 YNVVIDGYAKLGDIVNAVRLYDQITVAGMHPTIVTCNSLLYGYCKIGDLQLAESYFRAIQ 580
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
S L A+ Y +M G+V + + +E+ K + + TY++ + L D
Sbjct: 581 LSGLLPTAVTYTTLMDALSEAGEVNTMLSLFDEMVAKRIKANAVTYSVIVKGLCKQLRFD 640
Query: 132 QVKKFLDEMSCDSGGSD-DWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 190
+ L +M DS G + D + Y L+ + + ++ A + + + +TY+
Sbjct: 641 EAINVLKDM--DSKGINADPITYNTLIQGFCESENVQMAFHIHDIMLCRGLVPTP-VTYN 697
Query: 191 FLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLG----HLKEVGEIIDQ 246
LI + G + + + +SLR K+ Y ++ + G + VG+++D
Sbjct: 698 LLINVLCLKGKVIQAEILLESLRENGIKLRKFAYTTLIKAQCAKGMPINAVLLVGKLLDA 757
Query: 247 WKQSATSDFDISACNRL 263
+++ DF +A NRL
Sbjct: 758 GFEASIEDFS-AAINRL 773
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 103/251 (41%), Gaps = 21/251 (8%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
YT L + + A E+F + S +A+ YN ++ + + ++E+
Sbjct: 198 YTILTRAFCKTGRLKDALEIFRNIP----SPDAIAYNAIIHGHCRKNDCDGALEFLKEMN 253
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 166
+ V PD+FTYN+ I D+ + L EM D G + D V + ++++ A
Sbjct: 254 ERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMV-DRGVTPDTVTFNSIMDGLCKAGKF 312
Query: 167 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 226
A S V AE++ + TY+ LI +GL + +D+ + + S ++
Sbjct: 313 ERAHSLLAVMAERN-CRPSCCTYNTLI---SGLCKQQNVDRAKDLV----DEFVSSGFVP 364
Query: 227 ILSSYLML-------GHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 279
+ +Y +L G + E E++ + + ++ N L+ TEKA E
Sbjct: 365 DVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTP-NLVTYNTLIDGLCKASKTEKAYEL 423
Query: 280 HMLLLQKNCAP 290
L+ P
Sbjct: 424 LESLVSSGFVP 434
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 1/108 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L+ A T+KA E+ + ++ + + +N +M G+ E+ ++ +
Sbjct: 263 TYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVM 322
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKY 153
+N P TYN IS N+D+ K +DE SG D V Y
Sbjct: 323 AERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFV-SSGFVPDVVTY 369
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 61/118 (51%), Gaps = 4/118 (3%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y +L++ Y + T++A+++ + ++ + +YN +M Y G+++++ V E++
Sbjct: 509 YVSLVNGYCKSSRTKEAQKVVDGIRGTPY---IDVYNALMDGYCKEGRLDEIPNVFEDMA 565
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+ VP+I TYN+ + +D+ FL+ M +G D V Y +++ AS
Sbjct: 566 CRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMH-SAGCVPDVVSYNIIIDGLFKAS 622
>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
Length = 543
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 97/221 (43%), Gaps = 11/221 (4%)
Query: 78 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFL 137
+++++N ++ Q+ + ++EE+ + +VPD+ TYN I + +++ ++ L
Sbjct: 172 DSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLL 231
Query: 138 DEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAE-KSITQRQWITYDFLIILY 196
+ M + V Y L+ Y + L+E +S T +T++ LI
Sbjct: 232 ETMV-KRKVRPNLVTYNTLIYGYCKTG--CTGLAHQLIERMIQSGTHPDVVTFNSLI--- 285
Query: 197 AGLGNKDKIDQIWKSLRMTKQKMTSRN---YICILSSYLMLGHLKEVGEIIDQWKQSATS 253
+G K KID+ + L + K+ + + N Y ++S G E E++ +
Sbjct: 286 SGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGIL 345
Query: 254 DFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 294
DI N L+G F E+A + L++++ P S
Sbjct: 346 P-DIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGIS 385
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 115/252 (45%), Gaps = 18/252 (7%)
Query: 46 TYTALLHLYAGAKWTEKAEELF-ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
T LL A+ +A ++F + + + N + YN ++ + G +E+ ++ E
Sbjct: 71 TCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAE 130
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE-MSCDSGGSDDWVKYVNLVNIYITA 163
+K + PD+ T++ + + T N+ + ++ E + C + D V + LV+ A
Sbjct: 131 MKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVEC----APDSVLFNILVHGLCKA 186
Query: 164 SHLVNAESSTLVE--AEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR-MTKQKMT 220
+ L +E+ ++E +E+ I +TY+ LI GL ++++ + L M K+K+
Sbjct: 187 NQL--SEARQMIEEMSERGIVP-DVVTYNSLI---DGLCKSYRMEEARQLLETMVKRKVR 240
Query: 221 SR--NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 278
Y ++ Y G ++I++ QS T D+ N L+ F +KA E
Sbjct: 241 PNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHP-DVVTFNSLISGFCQKSKIDKACE 299
Query: 279 FHMLLLQKNCAP 290
L+ + CAP
Sbjct: 300 VLHLMKKGLCAP 311
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 56/115 (48%), Gaps = 1/115 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY L++ Y T A +L ER+ QS + + +N +++ + +++K V+ +
Sbjct: 245 TYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLM 304
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 160
K+ P++ TYN+ IS ++ + L EM G D + Y +L+ I+
Sbjct: 305 KKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMD-GRGILPDIITYNSLIGIF 358
Score = 41.2 bits (95), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 51/111 (45%), Gaps = 1/111 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
T+ +L+ + +KA E+ +K+ + N + YN +++ G+ + ++ E+
Sbjct: 280 TFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEM 339
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 156
+ ++PDI TYN I I+Q + + M + G D + Y L
Sbjct: 340 DGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMV-ERGVIPDGISYCTL 389
>gi|224072823|ref|XP_002303899.1| predicted protein [Populus trichocarpa]
gi|222841331|gb|EEE78878.1| predicted protein [Populus trichocarpa]
Length = 427
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/236 (19%), Positives = 105/236 (44%), Gaps = 15/236 (6%)
Query: 42 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 101
+TS++ +LL++ W +A ELF++ + N++ +N M+ ++ G+ E+ + V
Sbjct: 131 RTSQSLNSLLNVLVDNGWFLEANELFDKGYEMGFRLNSVAFNVMIKGWLEKGEWEQASKV 190
Query: 102 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV-NIY 160
+E+ + V P + TYN I +D+ K L++M G + + + L+
Sbjct: 191 FDEMLERKVEPSVVTYNSLIGYLCRNGELDKAKGLLEDM-IKKGKRPNAITFALLMEGSC 249
Query: 161 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 220
+ H N + + E + + + +L + LG + KID+ L K++
Sbjct: 250 LIGEH--NEAKKMMFDMEYRGCKPTVVNFG---VLMSDLGKRGKIDEAKSVLHEMKKRHM 304
Query: 221 SRNYICILSSYLMLGHLKEVGEIIDQWK-----QSATSDFDISACNRLLGAFSDVG 271
+ +++ +++ +L + G D ++ Q + + + L+ F VG
Sbjct: 305 KPD---VVTYNILINYLCKEGRAADAYEVLFEMQVGGCEANAATYRMLVDGFCRVG 357
>gi|449466949|ref|XP_004151188.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
chloroplastic-like [Cucumis sativus]
Length = 608
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 62/125 (49%), Gaps = 1/125 (0%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY + ++ Y KAE++F +++ + Y+ ++++Y G+++ ++ ++
Sbjct: 402 TYASAINAYCRVGLYSKAEDIFGEMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKM 461
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
K K P+++ YN+ + N+ QV+K EM + D V Y ++++ Y+ AS
Sbjct: 462 KEKGCQPNVWIYNILMEMHGKAKNLKQVEKLWKEMK-RKKIAPDKVSYTSIISAYVKASE 520
Query: 166 LVNAE 170
E
Sbjct: 521 FEKCE 525
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 63/311 (20%), Positives = 121/311 (38%), Gaps = 56/311 (18%)
Query: 22 TKVFGI------HSGERYFEGLPLS--------AKTSETYTALLHLYAGAKWTEKAEELF 67
TK++GI SG R FE L A+ Y+AL+ +A + + AE+L+
Sbjct: 260 TKIYGILCESLAKSG-RVFESLEFFRDMRKKGIAEDYTIYSALICTFASIQEVKLAEDLY 318
Query: 68 ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK--------------------- 106
K L + M+ +++ +Y+ G +EK +VE +K
Sbjct: 319 NEAKAKKLLRDPAMFLKLILMYVQQGSLEKALEIVEVMKDFKIGVSDCIFCAIVNGYATR 378
Query: 107 --------------RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVK 152
P TY I++ + + EM + G V
Sbjct: 379 RGYEAAVKVYEKLIEDGCEPGQVTYASAINAYCRVGLYSKAEDIFGEME-EKGFDKCVVA 437
Query: 153 YVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 212
Y +L+++Y L +A EK WI Y+ L+ ++ N +++++WK +
Sbjct: 438 YSSLISMYGKTGRLKDAMRLLAKMKEKGCQPNVWI-YNILMEMHGKAKNLKQVEKLWKEM 496
Query: 213 RMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGL 272
+ K +Y I+S+Y+ ++ + +++ + + D + ++G FS
Sbjct: 497 KRKKIAPDKVSYTSIISAYVKASEFEKCEQYYREFRMNGGT-IDKAFGGIMVGVFSK--- 552
Query: 273 TEKANEFHMLL 283
T + +E LL
Sbjct: 553 TSRVDELVKLL 563
Score = 37.4 bits (85), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 41/216 (18%), Positives = 97/216 (44%), Gaps = 6/216 (2%)
Query: 66 LFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFT---YNLWIS 122
+F+R+K + + ++ Y +M Y+ +G E+V + E++ + V F+ Y +
Sbjct: 209 VFQRLKSARIEADSGCYCRVMEAYLKLGDSERVMELFNEVESRISVSTPFSTKIYGILCE 268
Query: 123 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT 182
S A + + + +F +M G ++D+ Y L+ + + + AE EA+
Sbjct: 269 SLAKSGRVFESLEFFRDMR-KKGIAEDYTIYSALICTFASIQEVKLAE-DLYNEAKAKKL 326
Query: 183 QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 242
R + LI++Y G+ +K +I + ++ K ++ + I++ Y + +
Sbjct: 327 LRDPAMFLKLILMYVQQGSLEKALEIVEVMKDFKIGVSDCIFCAIVNGYATRRGYEAAVK 386
Query: 243 IIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 278
+ ++ + ++ + + A+ VGL KA +
Sbjct: 387 VYEKLIEDGCEPGQVTYAS-AINAYCRVGLYSKAED 421
>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 577
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 64/130 (49%), Gaps = 9/130 (6%)
Query: 6 EFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--------TYTALLHLYAGA 57
E ++S + + T + G +R EG+ L + S+ TYT L+H + A
Sbjct: 389 ELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQA 448
Query: 58 KWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTY 117
+ + A+ +F+++ + N + YN ++ G++EK +V E ++R + P I+TY
Sbjct: 449 RDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTY 508
Query: 118 NLWISS-CAA 126
N+ I C A
Sbjct: 509 NIMIEGMCKA 518
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/172 (20%), Positives = 79/172 (45%), Gaps = 12/172 (6%)
Query: 46 TYTALLHLYAG-AKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
TY++L+ +W++ A L + + ++ N + +N ++ ++ G++ + + +E
Sbjct: 297 TYSSLISCLCNYERWSD-ASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDE 355
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+ ++++ PDIFTY+ I+ +D+ K E+ + V Y L+N + A
Sbjct: 356 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF-ELMISKDCFPNVVTYNTLINGFCKAK 414
Query: 165 HLVNAESSTLVEAEKSITQR----QWITYDFLIILYAGLGNKDKIDQIWKSL 212
+ VE + ++QR +TY LI + + D ++K +
Sbjct: 415 RIDEG-----VELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 461
>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 566
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/279 (19%), Positives = 121/279 (43%), Gaps = 5/279 (1%)
Query: 14 YATRIDLMTKVFGIHSG-ERYFEGLPLSAKTSE-TYTALLHLYAGAKWTEKAEELFERVK 71
Y T ID K I + +FE L +E TYT L++ ++ E++E+++
Sbjct: 201 YTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQ 260
Query: 72 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 131
+ + N YN +M G+ + V +E++ + V +I TYN I + ++
Sbjct: 261 EDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLN 320
Query: 132 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 191
+ K +D+M D G + + + Y L++ + L A S + ++ +TY+
Sbjct: 321 EANKVVDQMKSD-GINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSP-SLVTYNI 378
Query: 192 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 251
L+ + G+ ++ K + K + Y ++ ++ ++++ ++ ++
Sbjct: 379 LVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELG 438
Query: 252 TSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 290
D+ + L+ F G +A+ +++KNC P
Sbjct: 439 LVP-DVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEP 476
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 49/100 (49%), Gaps = 1/100 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY+ L+H + +A LF+ + + N N ++YN M+ Y G + +++E+
Sbjct: 445 TYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEM 504
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSG 145
+ K + P++ +Y I + ++ +++M DSG
Sbjct: 505 EEKELAPNVASYRYMIEVLCKERKSKEAERLVEKM-IDSG 543
>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
Length = 548
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 86/172 (50%), Gaps = 12/172 (6%)
Query: 46 TYTALLH-LYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
TYTAL++ L ++W++ A L + +K+ ++ N + Y+ ++ ++ G+V + + EE
Sbjct: 227 TYTALVNGLCNSSRWSDAARLLSDMIKK-KITPNVITYSALLDAFVKNGKVLEAKELFEE 285
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+ R ++ PDI TY+ ++ ID+ + D M G D V Y L+N + A
Sbjct: 286 MVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMV-SKGCLADVVSYNTLINGFCKAK 344
Query: 165 HLVNAESSTLVEAEKSITQR----QWITYDFLIILYAGLGNKDKIDQIWKSL 212
+ + ++ + ++QR +TY+ LI + G+ DK + + +
Sbjct: 345 RVEDG-----MKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 391
Score = 44.3 bits (103), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 38/78 (48%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+Y L++ + AK E +LF + Q L N + YN ++ + G V+K ++
Sbjct: 332 SYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 391
Query: 106 KRKNVVPDIFTYNLWISS 123
+ PDI+TYN+ +
Sbjct: 392 DFFGISPDIWTYNILLGG 409
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 92/236 (38%), Gaps = 15/236 (6%)
Query: 47 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 106
Y A++ K A + F+ +++ + N + Y ++ + + A ++ ++
Sbjct: 193 YNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMI 252
Query: 107 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE---MSCDSGGSDDWVKYVNLVNIYITA 163
+K + P++ TY+ + + + + K+ +E MS D D V Y +LVN
Sbjct: 253 KKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP----DIVTYSSLVNGLCLH 308
Query: 164 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 223
+ A + K ++Y+ LI G +++ K R Q+ N
Sbjct: 309 DRIDEANQMFDLMVSKGCLA-DVVSYNTLI---NGFCKAKRVEDGMKLFREMSQRGLVSN 364
Query: 224 ---YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 276
Y ++ + G + + E Q S DI N LLG D G EKA
Sbjct: 365 TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISP-DIWTYNILLGGLCDNGELEKA 419
>gi|242037185|ref|XP_002465987.1| hypothetical protein SORBIDRAFT_01g049600 [Sorghum bicolor]
gi|241919841|gb|EER92985.1| hypothetical protein SORBIDRAFT_01g049600 [Sorghum bicolor]
Length = 480
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 106/253 (41%), Gaps = 13/253 (5%)
Query: 44 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 103
S+TY LL + + A LF+ + L A +Y ++ Y G +++ VE
Sbjct: 126 SQTYARLLMMLGKCRQPGPAAALFKAMLSERLRPTADVYTALVGAYGYSGLLDEALAAVE 185
Query: 104 EIK-RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS-----CDSGGSDDWVKYVNLV 157
++K + PD +T+++ I+ CA + D + LDEMS C+S V + ++
Sbjct: 186 QMKGAADCKPDGYTFSVLINCCAKSRRFDLIPAVLDEMSYLGIECNS------VIHNAII 239
Query: 158 NIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 217
+ Y A+ E + E T + +I Y G D++++ + ++
Sbjct: 240 DGYGKAAMFEEMEGALSAMLESGSNVPDIYTMNSVIGAYGNHGRTDEMEKSYSEFQLMGV 299
Query: 218 KMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 277
+ ++ + ++ SY G ++ I K+ S ++ N ++ F G EK
Sbjct: 300 EPDTKTFNIMIKSYGKAGMYDKMMSIFRYMKKRFFSPTAVT-FNTVIECFGRAGNIEKME 358
Query: 278 EFHMLLLQKNCAP 290
+ L+ + P
Sbjct: 359 YYFRLMKIQGVKP 371
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 75/164 (45%), Gaps = 15/164 (9%)
Query: 19 DLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFN 78
D M +F + +R+F + T+ T+ ++ + A EK E F +K + N
Sbjct: 320 DKMMSIFR-YMKKRFF------SPTAVTFNTVIECFGRAGNIEKMEYYFRLMKIQGVKPN 372
Query: 79 ALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI---DQVKK 135
+ Y ++ Y G ++KV ++ + + NVV D +N IS+ A + +I +++ +
Sbjct: 373 PITYCSLVNGYSKAGLLDKVPGIIRQTENTNVVLDTPFFNCVISAYAKSGDIKIMEEMLQ 432
Query: 136 FLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK 179
+ E C D + Y ++ Y TA + A +EAE+
Sbjct: 433 LMKEKKCKP----DKITYATMIQAY-TAQGMDEAARLLEMEAER 471
>gi|147843358|emb|CAN80524.1| hypothetical protein VITISV_030537 [Vitis vinifera]
Length = 714
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 97/203 (47%), Gaps = 9/203 (4%)
Query: 46 TYTALLHLYAGAKWTEKAEELFER-VKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 104
TY+ L++ G+ ++A ELFE V + + +AL YN ++ + +V++ ++E
Sbjct: 281 TYSTLINGLCGSGRLKEAIELFEEMVSKDQILPDALTYNALINGFCHGXKVDRALKIMEF 340
Query: 105 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 164
+K+ P++F Y+ ++ +++ K+ DEM G D V Y L+N + A
Sbjct: 341 MKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEMK-SLGLKPDTVGYTTLINFFCRAG 399
Query: 165 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQ---IWKSLRMTKQKMTS 221
V+ L + ++ + +T++ ++ GL + + ++ + + L +
Sbjct: 400 R-VDEAMELLKDMXENKCRADTVTFN---VILGGLCREGRFEEAXGMLERLPYEGVYLNK 455
Query: 222 RNYICILSSYLMLGHLKEVGEII 244
+Y +L+S G L++ +++
Sbjct: 456 ASYRIVLNSLCREGELQKATQLV 478
Score = 37.4 bits (85), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 111/266 (41%), Gaps = 37/266 (13%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY +LH A +K + + + ++ F+ ++ +M + + E+V + + I
Sbjct: 165 TYATILHKLAKSKKFQAIDAVLHQMTYETCKFHEGIFLNLMKHFSKLSLHERVVEMFDAI 224
Query: 106 ----KRKNVVPDIFT-YNLWISSCAATL-----NIDQVKKFLDEMSCDSGGSDDWVKYVN 155
+ K + I T NL + S +++ +ID + ++EM V Y N
Sbjct: 225 XPIVREKPSLKAISTCLNLLVESNQSSITAKNGDIDSAFEVVEEM------KKSHVSYPN 278
Query: 156 LVNIYITASHLVNA--ESSTLVEA----EKSITQRQ----WITYDFLIILYAGLGNKDKI 205
L IT S L+N S L EA E+ +++ Q +TY+ LI G + K+
Sbjct: 279 L----ITYSTLINGLCGSGRLKEAIELFEEMVSKDQILPDALTYNALI---NGFCHGXKV 331
Query: 206 DQIWKSLRMTKQKMTSR---NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNR 262
D+ K + K+ + NY +++ + G L+E E+ D+ K D
Sbjct: 332 DRALKIMEFMKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEMKSLGLKP-DTVGYTT 390
Query: 263 LLGAFSDVGLTEKANEFHMLLLQKNC 288
L+ F G ++A E + + C
Sbjct: 391 LINFFCRAGRVDEAMELLKDMXENKC 416
>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g31850,
chloroplastic; AltName: Full=Protein PROTON GRADIENT
REGULATION 3; Flags: Precursor
gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
Length = 1112
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/214 (19%), Positives = 100/214 (46%), Gaps = 3/214 (1%)
Query: 1 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEG-LPLSAKTS-ETYTALLHLYAGAK 58
+++ ++F + Y ID ++K ++ ++ FEG L + + Y L++ + A
Sbjct: 881 LMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAG 940
Query: 59 WTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYN 118
+ A LF+R+ + + + Y+ ++ VG+V++ +E+K + PD+ YN
Sbjct: 941 EADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYN 1000
Query: 119 LWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAE 178
L I+ + +++ +EM G + D Y +L+ + + + +V E +
Sbjct: 1001 LIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLI-LNLGIAGMVEEAGKIYNEIQ 1059
Query: 179 KSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 212
++ + T++ LI Y+ G + +++++
Sbjct: 1060 RAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTM 1093
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 78/184 (42%), Gaps = 5/184 (2%)
Query: 42 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 101
T+ TY + Y + + A E FE++K ++ N + N + G+ + +
Sbjct: 431 PTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQI 490
Query: 102 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 161
+K +VPD TYN+ + + ID+ K L EM ++G D + +L+N
Sbjct: 491 FYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMM-ENGCEPDVIVVNSLINTLY 549
Query: 162 TASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 221
A + A + E + + +TY+ L+ AGLG KI + + QK
Sbjct: 550 KADRVDEAWKMFMRMKEMKL-KPTVVTYNTLL---AGLGKNGKIQEAIELFEGMVQKGCP 605
Query: 222 RNYI 225
N I
Sbjct: 606 PNTI 609
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/209 (19%), Positives = 86/209 (41%), Gaps = 8/209 (3%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
+Y L+HL +++ +A E++ R+ + Y+ +M ++ V +++E+
Sbjct: 190 SYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEM 249
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
+ + P+++T+ + I I++ + L M D G D V Y L++ TA
Sbjct: 250 ETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMD-DEGCGPDVVTYTVLIDALCTARK 308
Query: 166 LVNAESSTLVEAEKSITQRQ---WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 222
L A+ EK T R +TY L+ ++ + D + Q W +
Sbjct: 309 LDCAKEVF----EKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVV 364
Query: 223 NYICILSSYLMLGHLKEVGEIIDQWKQSA 251
+ ++ + G+ E + +D +
Sbjct: 365 TFTILVDALCKAGNFGEAFDTLDVMRDQG 393
Score = 40.4 bits (93), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 91/224 (40%), Gaps = 8/224 (3%)
Query: 31 ERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYM 90
E++ + L + K TY L+ A E A+++F +VK + + YN ++ Y
Sbjct: 773 EKFTKDLGVQPKLP-TYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYG 831
Query: 91 SVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDW 150
G+++++ + +E+ + T+N+ IS N+D ++ D S
Sbjct: 832 KSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTA 891
Query: 151 VKYVNLVNIYITASHLVNAESSTLVEAEKSITQR-QWITYDFLIILYAGLGNKDKIDQIW 209
Y L++ + L E+ L E R Y+ LI + G D ++
Sbjct: 892 CTYGPLIDGLSKSGRLY--EAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALF 949
Query: 210 KSLRMTKQKMTS--RNYICILSSYLMLGHLKEVGEIIDQWKQSA 251
K RM K+ + + Y ++ M+G + E + K+S
Sbjct: 950 K--RMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESG 991
>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 81/184 (44%), Gaps = 8/184 (4%)
Query: 14 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSE---TYTALLH-LYAGAKWTEKAEELFER 69
Y T I ++ K + RYFE + + + S Y +L+H L KW +KA+EL
Sbjct: 412 YGTVIGILCKSGRVEDAMRYFEQM-IDERLSPGNIVYNSLIHSLCIFDKW-DKAKELILE 469
Query: 70 VKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLN 129
+ + + + +N ++ + G+V + + + + R V PDI TY+ I
Sbjct: 470 MLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGK 529
Query: 130 IDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITY 189
+D+ K L M G D V Y L+N Y S + +A E E S ITY
Sbjct: 530 MDEATKLLASMV-SVGMKPDCVTYNTLINGYCKISRMEDA-LVLFREMESSGVSPDIITY 587
Query: 190 DFLI 193
+ ++
Sbjct: 588 NIIL 591
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 71/168 (42%), Gaps = 2/168 (1%)
Query: 46 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 105
TY++++ A+ +KA E+ + ++ + N YN ++ Y S GQ ++ ++++
Sbjct: 236 TYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKM 295
Query: 106 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 165
V PD+ TYN + + +K D M+ G + Y L+ Y T
Sbjct: 296 HSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMT-KRGLKPEITTYGTLLQGYATKGA 354
Query: 166 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 213
LV + I ++ + LI YA G D+ ++ +R
Sbjct: 355 LVEMHGLLDLMVRNGIHPNHYV-FSILICAYAKQGKVDQAMLVFSKMR 401
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.132 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,296,354,399
Number of Sequences: 23463169
Number of extensions: 161451247
Number of successful extensions: 458154
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3273
Number of HSP's successfully gapped in prelim test: 2230
Number of HSP's that attempted gapping in prelim test: 423502
Number of HSP's gapped (non-prelim): 27096
length of query: 295
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 154
effective length of database: 9,050,888,538
effective search space: 1393836834852
effective search space used: 1393836834852
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 76 (33.9 bits)