Query 022534
Match_columns 295
No_of_seqs 106 out of 1564
Neff 9.6
Searched_HMMs 46136
Date Fri Mar 29 04:16:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022534.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/022534hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4178 Soluble epoxide hydrol 100.0 1E-34 2.3E-39 244.7 22.2 267 12-293 23-319 (322)
2 PLN03084 alpha/beta hydrolase 100.0 1.6E-33 3.5E-38 251.4 26.2 269 15-292 109-382 (383)
3 PRK00870 haloalkane dehalogena 100.0 1.8E-33 3.9E-38 245.8 24.4 271 3-293 9-300 (302)
4 TIGR02240 PHA_depoly_arom poly 100.0 3.3E-33 7.1E-38 241.1 22.3 261 10-294 1-266 (276)
5 PLN02824 hydrolase, alpha/beta 100.0 7.2E-33 1.6E-37 241.1 24.3 266 13-293 10-293 (294)
6 PRK03204 haloalkane dehalogena 100.0 1.7E-32 3.6E-37 237.8 23.5 268 7-291 10-285 (286)
7 PRK03592 haloalkane dehalogena 100.0 2.6E-32 5.5E-37 237.7 21.7 265 13-294 9-289 (295)
8 PLN02679 hydrolase, alpha/beta 100.0 1.5E-31 3.2E-36 238.9 25.5 264 13-293 63-356 (360)
9 PLN02965 Probable pheophorbida 100.0 7.8E-32 1.7E-36 229.9 17.8 239 37-294 5-253 (255)
10 TIGR03343 biphenyl_bphD 2-hydr 100.0 3E-30 6.6E-35 222.9 23.2 263 10-293 4-282 (282)
11 TIGR03056 bchO_mg_che_rel puta 100.0 3.8E-30 8.3E-35 221.4 23.2 263 9-292 4-278 (278)
12 PLN03087 BODYGUARD 1 domain co 100.0 5.7E-30 1.2E-34 233.1 24.0 265 14-293 179-478 (481)
13 PRK10349 carboxylesterase BioH 100.0 3.3E-30 7.1E-35 219.9 20.4 242 23-292 4-254 (256)
14 PLN02385 hydrolase; alpha/beta 100.0 5.1E-30 1.1E-34 228.4 20.5 263 11-293 62-344 (349)
15 PRK06489 hypothetical protein; 100.0 1.1E-29 2.3E-34 227.2 22.1 266 18-294 47-357 (360)
16 PLN02578 hydrolase 100.0 2.4E-29 5.1E-34 224.4 22.5 261 13-293 68-354 (354)
17 PHA02857 monoglyceride lipase; 100.0 8E-29 1.7E-33 213.6 23.9 256 13-294 3-273 (276)
18 TIGR03611 RutD pyrimidine util 100.0 3.3E-29 7.1E-34 212.4 20.4 247 23-293 1-257 (257)
19 PRK10673 acyl-CoA esterase; Pr 100.0 9.4E-29 2E-33 210.5 21.5 247 22-293 2-254 (255)
20 PRK10749 lysophospholipase L2; 100.0 2.3E-28 4.9E-33 216.1 24.6 275 9-294 29-329 (330)
21 KOG4409 Predicted hydrolase/ac 100.0 1.6E-28 3.5E-33 207.9 20.5 272 8-294 62-364 (365)
22 PLN02298 hydrolase, alpha/beta 100.0 1.5E-28 3.2E-33 217.4 21.1 260 10-293 32-316 (330)
23 PRK08775 homoserine O-acetyltr 100.0 4.4E-29 9.5E-34 221.9 16.8 265 15-293 40-338 (343)
24 PRK07581 hypothetical protein; 100.0 1.9E-28 4.1E-33 217.6 20.6 264 19-294 24-336 (339)
25 TIGR02427 protocat_pcaD 3-oxoa 100.0 6.7E-28 1.5E-32 202.9 19.5 247 23-292 2-251 (251)
26 PRK11126 2-succinyl-6-hydroxy- 100.0 1.1E-27 2.4E-32 202.3 19.5 232 35-293 2-241 (242)
27 TIGR01738 bioH putative pimelo 100.0 1.8E-27 3.9E-32 199.8 18.9 234 35-291 4-245 (245)
28 PRK00175 metX homoserine O-ace 100.0 1.5E-27 3.2E-32 214.5 19.2 267 19-293 31-373 (379)
29 TIGR01392 homoserO_Ac_trn homo 100.0 1.2E-27 2.7E-32 213.2 18.5 266 18-292 13-351 (351)
30 PLN02211 methyl indole-3-aceta 100.0 7.8E-27 1.7E-31 200.8 21.0 259 19-294 5-270 (273)
31 KOG1454 Predicted hydrolase/ac 100.0 4.1E-27 8.9E-32 205.9 19.3 245 34-293 57-323 (326)
32 PLN02894 hydrolase, alpha/beta 100.0 1.5E-26 3.3E-31 209.0 23.0 261 22-294 93-385 (402)
33 COG2267 PldB Lysophospholipase 99.9 2.1E-26 4.5E-31 199.5 19.7 273 8-294 7-294 (298)
34 TIGR01250 pro_imino_pep_2 prol 99.9 1.9E-26 4.1E-31 198.3 19.4 267 12-292 3-288 (288)
35 PF12697 Abhydrolase_6: Alpha/ 99.9 2.2E-27 4.7E-32 196.5 12.8 221 38-286 1-228 (228)
36 PLN02652 hydrolase; alpha/beta 99.9 5.4E-26 1.2E-30 204.2 20.8 256 15-293 115-386 (395)
37 KOG1455 Lysophospholipase [Lip 99.9 6.2E-26 1.4E-30 188.9 17.3 264 10-295 27-313 (313)
38 PRK14875 acetoin dehydrogenase 99.9 3E-25 6.6E-30 199.2 20.6 255 10-293 108-370 (371)
39 TIGR03695 menH_SHCHC 2-succiny 99.9 5.1E-25 1.1E-29 185.0 19.6 240 36-292 2-251 (251)
40 PRK05855 short chain dehydroge 99.9 5E-25 1.1E-29 208.9 19.5 260 13-293 5-291 (582)
41 PLN02980 2-oxoglutarate decarb 99.9 1.6E-24 3.4E-29 223.3 23.1 261 16-293 1351-1638(1655)
42 TIGR01249 pro_imino_pep_1 prol 99.9 9.3E-24 2E-28 184.8 24.6 122 14-144 7-130 (306)
43 TIGR01607 PST-A Plasmodium sub 99.9 2.9E-24 6.2E-29 189.8 20.9 258 15-293 2-332 (332)
44 PLN02511 hydrolase 99.9 4.8E-23 1E-27 185.5 16.0 242 34-293 99-364 (388)
45 KOG2984 Predicted hydrolase [G 99.9 1.2E-22 2.6E-27 159.0 11.6 254 8-293 18-275 (277)
46 PRK06765 homoserine O-acetyltr 99.9 2.7E-21 5.9E-26 173.2 18.8 266 20-293 40-387 (389)
47 KOG2382 Predicted alpha/beta h 99.9 2.3E-20 5E-25 158.1 17.8 237 34-293 51-312 (315)
48 TIGR03100 hydr1_PEP hydrolase, 99.8 1.9E-19 4.1E-24 155.1 19.5 227 35-292 26-273 (274)
49 PRK05077 frsA fermentation/res 99.8 7.3E-19 1.6E-23 159.3 23.4 214 34-293 193-411 (414)
50 COG1647 Esterase/lipase [Gener 99.8 7E-20 1.5E-24 145.9 14.4 221 37-293 17-243 (243)
51 PRK10985 putative hydrolase; P 99.8 5E-19 1.1E-23 156.1 21.0 230 34-279 57-300 (324)
52 PF00561 Abhydrolase_1: alpha/ 99.8 4.5E-20 9.7E-25 153.9 8.6 217 63-289 1-230 (230)
53 PRK13604 luxD acyl transferase 99.8 2E-17 4.3E-22 141.7 22.6 230 7-277 5-247 (307)
54 PLN02872 triacylglycerol lipas 99.8 2E-18 4.4E-23 154.8 17.4 280 8-294 41-389 (395)
55 COG0596 MhpC Predicted hydrola 99.8 8.2E-18 1.8E-22 141.3 19.7 263 16-292 5-280 (282)
56 PRK10566 esterase; Provisional 99.8 1.6E-17 3.4E-22 141.0 20.6 221 21-294 13-248 (249)
57 TIGR01836 PHA_synth_III_C poly 99.8 5.6E-18 1.2E-22 151.0 18.6 244 35-293 62-349 (350)
58 TIGR01838 PHA_synth_I poly(R)- 99.8 1.4E-17 3E-22 153.6 21.3 236 34-281 187-462 (532)
59 PRK11071 esterase YqiA; Provis 99.8 2.8E-17 6E-22 133.7 18.4 183 36-292 2-189 (190)
60 PRK07868 acyl-CoA synthetase; 99.7 3.7E-16 7.9E-21 156.4 22.6 248 34-293 66-360 (994)
61 KOG2564 Predicted acetyltransf 99.7 3.1E-16 6.7E-21 129.1 14.1 107 29-142 68-180 (343)
62 KOG2931 Differentiation-relate 99.7 5.5E-15 1.2E-19 122.7 20.4 258 19-293 30-305 (326)
63 PF03096 Ndr: Ndr family; Int 99.7 9.3E-16 2E-20 128.9 15.3 258 16-294 4-279 (283)
64 PF06342 DUF1057: Alpha/beta h 99.7 4.4E-15 9.6E-20 123.5 18.7 254 10-292 13-297 (297)
65 PF12146 Hydrolase_4: Putative 99.7 2.1E-16 4.6E-21 109.0 7.4 79 20-102 1-79 (79)
66 TIGR03101 hydr2_PEP hydrolase, 99.7 1.5E-15 3.2E-20 129.2 13.7 121 14-142 3-132 (266)
67 PF12695 Abhydrolase_5: Alpha/ 99.6 5E-15 1.1E-19 114.8 13.3 144 37-274 1-145 (145)
68 KOG1552 Predicted alpha/beta h 99.6 2.2E-14 4.9E-19 117.8 14.9 192 29-293 54-251 (258)
69 KOG2565 Predicted hydrolases o 99.6 3.8E-14 8.2E-19 121.1 12.2 122 15-143 128-263 (469)
70 PRK11460 putative hydrolase; P 99.6 1.1E-13 2.5E-18 116.1 14.9 179 33-292 14-210 (232)
71 TIGR02821 fghA_ester_D S-formy 99.5 8.1E-12 1.8E-16 107.7 22.6 130 11-142 15-171 (275)
72 COG2021 MET2 Homoserine acetyl 99.5 1.6E-12 3.4E-17 112.3 17.0 268 20-293 35-367 (368)
73 PLN02442 S-formylglutathione h 99.5 4.4E-12 9.5E-17 109.7 19.5 107 34-143 46-177 (283)
74 KOG4667 Predicted esterase [Li 99.5 5.2E-12 1.1E-16 100.6 17.1 206 36-280 34-245 (269)
75 COG0429 Predicted hydrolase of 99.5 2.9E-12 6.2E-17 109.0 15.9 258 19-293 59-339 (345)
76 PLN00021 chlorophyllase 99.4 5.3E-12 1.2E-16 110.2 16.5 96 35-141 52-163 (313)
77 COG1506 DAP2 Dipeptidyl aminop 99.4 4.1E-12 8.9E-17 121.2 16.7 236 9-294 364-616 (620)
78 KOG4391 Predicted alpha/beta h 99.4 3.4E-12 7.3E-17 101.8 10.8 212 19-293 63-281 (300)
79 COG3208 GrsT Predicted thioest 99.4 8.8E-11 1.9E-15 96.1 18.0 218 35-292 7-234 (244)
80 TIGR03230 lipo_lipase lipoprot 99.4 5.3E-12 1.1E-16 113.8 11.9 100 35-142 41-152 (442)
81 TIGR01840 esterase_phb esteras 99.3 7.1E-11 1.5E-15 97.8 16.3 108 34-143 12-129 (212)
82 PF00326 Peptidase_S9: Prolyl 99.3 5.9E-11 1.3E-15 98.3 13.3 198 50-294 2-209 (213)
83 TIGR01839 PHA_synth_II poly(R) 99.3 8.1E-10 1.8E-14 101.7 20.2 228 34-275 214-482 (560)
84 TIGR03502 lipase_Pla1_cef extr 99.3 3E-11 6.5E-16 115.4 10.8 113 14-128 421-574 (792)
85 cd00707 Pancreat_lipase_like P 99.2 2.6E-11 5.6E-16 104.3 8.1 125 8-142 11-145 (275)
86 KOG1838 Alpha/beta hydrolase [ 99.2 2.5E-09 5.4E-14 94.4 18.6 106 34-146 124-237 (409)
87 PF00975 Thioesterase: Thioest 99.2 3.8E-09 8.3E-14 88.3 19.2 218 37-291 2-229 (229)
88 PF02230 Abhydrolase_2: Phosph 99.2 1.9E-10 4.1E-15 95.6 9.7 181 33-293 12-214 (216)
89 PF05448 AXE1: Acetyl xylan es 99.1 8.3E-09 1.8E-13 90.4 19.5 235 15-292 61-318 (320)
90 TIGR00976 /NonD putative hydro 99.1 4.7E-10 1E-14 105.9 10.6 117 19-143 5-131 (550)
91 PF01738 DLH: Dienelactone hyd 99.1 5.2E-09 1.1E-13 87.0 15.2 182 34-294 13-217 (218)
92 PRK10162 acetyl esterase; Prov 99.1 1.2E-08 2.7E-13 89.7 17.5 110 23-142 69-193 (318)
93 COG0400 Predicted esterase [Ge 99.1 2.3E-09 5E-14 87.5 11.8 173 32-293 15-204 (207)
94 PF06500 DUF1100: Alpha/beta h 99.0 1.9E-08 4.2E-13 89.4 16.3 216 33-293 188-408 (411)
95 PF06821 Ser_hydrolase: Serine 99.0 7.6E-09 1.7E-13 82.4 12.0 153 38-278 1-157 (171)
96 PRK10252 entF enterobactin syn 99.0 1.6E-08 3.4E-13 104.9 16.9 97 36-142 1069-1169(1296)
97 COG3458 Acetyl esterase (deace 98.9 9.4E-08 2E-12 79.3 16.2 235 12-292 58-315 (321)
98 TIGR01849 PHB_depoly_PhaZ poly 98.9 1.2E-07 2.5E-12 85.1 16.4 246 36-293 103-405 (406)
99 COG3571 Predicted hydrolase of 98.9 3.4E-07 7.4E-12 70.0 16.2 181 35-294 14-211 (213)
100 COG2945 Predicted hydrolase of 98.9 2.5E-07 5.5E-12 73.0 15.5 172 34-292 27-205 (210)
101 COG0412 Dienelactone hydrolase 98.9 4.9E-07 1.1E-11 76.0 18.4 179 36-294 28-233 (236)
102 PRK10115 protease 2; Provision 98.8 5.8E-07 1.3E-11 86.9 18.5 123 17-140 423-555 (686)
103 PTZ00472 serine carboxypeptida 98.8 1.6E-06 3.5E-11 79.9 20.6 124 12-141 48-213 (462)
104 PF02273 Acyl_transf_2: Acyl t 98.8 4.3E-06 9.2E-11 68.6 20.4 225 15-280 6-242 (294)
105 COG4757 Predicted alpha/beta h 98.8 4.2E-07 9.1E-12 73.8 13.9 249 19-291 14-280 (281)
106 PF05728 UPF0227: Uncharacteri 98.7 4.1E-06 8.8E-11 67.6 17.8 180 38-291 2-186 (187)
107 COG3243 PhaC Poly(3-hydroxyalk 98.7 5.9E-07 1.3E-11 79.2 13.7 107 34-146 106-219 (445)
108 PF10230 DUF2305: Uncharacteri 98.6 1.8E-06 4E-11 73.9 14.7 107 35-144 2-121 (266)
109 KOG2624 Triglyceride lipase-ch 98.6 3.7E-06 8.1E-11 75.3 16.5 131 9-142 46-197 (403)
110 PF12740 Chlorophyllase2: Chlo 98.6 2.2E-06 4.7E-11 72.0 14.1 98 35-145 17-131 (259)
111 PF07819 PGAP1: PGAP1-like pro 98.5 9.4E-07 2E-11 73.7 11.0 103 35-147 4-126 (225)
112 PRK05371 x-prolyl-dipeptidyl a 98.4 1.5E-05 3.3E-10 77.8 16.4 62 231-293 453-518 (767)
113 PF10503 Esterase_phd: Esteras 98.4 3.3E-05 7.3E-10 63.9 15.8 118 21-142 3-130 (220)
114 PF07859 Abhydrolase_3: alpha/ 98.3 5.7E-06 1.2E-10 68.2 11.0 95 38-142 1-108 (211)
115 KOG3043 Predicted hydrolase re 98.3 5.9E-06 1.3E-10 66.9 10.3 64 231-294 162-240 (242)
116 PF09752 DUF2048: Uncharacteri 98.3 0.0001 2.3E-09 64.2 17.4 242 33-292 90-347 (348)
117 smart00824 PKS_TE Thioesterase 98.3 2.7E-05 5.9E-10 63.5 13.3 93 40-142 2-100 (212)
118 PLN02733 phosphatidylcholine-s 98.3 3.8E-06 8.1E-11 76.6 8.7 95 46-147 105-204 (440)
119 PF07224 Chlorophyllase: Chlor 98.2 1.4E-05 3E-10 66.4 10.4 37 36-72 47-83 (307)
120 KOG1515 Arylacetamide deacetyl 98.2 0.0005 1.1E-08 60.5 20.6 60 234-294 269-335 (336)
121 PF06028 DUF915: Alpha/beta hy 98.2 0.0001 2.2E-09 62.4 14.8 205 35-292 11-253 (255)
122 PF03959 FSH1: Serine hydrolas 98.2 4.2E-06 9.2E-11 69.2 6.0 49 231-280 159-207 (212)
123 PF00450 Peptidase_S10: Serine 98.1 0.00014 3E-09 66.4 15.6 61 233-293 330-415 (415)
124 PF01674 Lipase_2: Lipase (cla 98.1 5.5E-06 1.2E-10 68.4 5.7 98 36-138 2-103 (219)
125 PF08538 DUF1749: Protein of u 98.1 0.00022 4.8E-09 61.3 15.0 93 35-141 33-145 (303)
126 COG0657 Aes Esterase/lipase [L 98.0 0.0015 3.2E-08 57.3 20.0 100 35-145 79-191 (312)
127 PF02129 Peptidase_S15: X-Pro 98.0 3.3E-05 7.2E-10 66.4 9.2 119 19-145 1-137 (272)
128 PF08386 Abhydrolase_4: TAP-li 98.0 2.6E-05 5.7E-10 56.6 6.6 60 233-293 34-93 (103)
129 COG4188 Predicted dienelactone 97.9 5.7E-05 1.2E-09 66.1 8.9 40 34-73 70-109 (365)
130 COG3319 Thioesterase domains o 97.9 0.00011 2.3E-09 62.2 10.3 100 36-145 1-104 (257)
131 COG3545 Predicted esterase of 97.9 0.0017 3.7E-08 50.9 16.0 59 231-292 115-177 (181)
132 PF03583 LIP: Secretory lipase 97.9 0.00071 1.5E-08 58.7 14.5 53 231-283 217-275 (290)
133 KOG4627 Kynurenine formamidase 97.8 0.00016 3.5E-09 57.9 8.9 60 231-291 205-268 (270)
134 KOG2281 Dipeptidyl aminopeptid 97.8 0.0019 4.1E-08 60.2 16.3 235 10-293 613-866 (867)
135 PF12715 Abhydrolase_7: Abhydr 97.8 0.00012 2.7E-09 64.5 8.4 108 33-141 113-257 (390)
136 COG3509 LpqC Poly(3-hydroxybut 97.8 0.00041 8.9E-09 58.8 11.1 130 10-144 34-179 (312)
137 KOG2112 Lysophospholipase [Lip 97.7 0.0014 3E-08 52.9 13.3 180 36-293 4-203 (206)
138 PF08840 BAAT_C: BAAT / Acyl-C 97.7 0.00014 3.1E-09 60.2 7.4 45 231-275 113-163 (213)
139 PF05990 DUF900: Alpha/beta hy 97.6 0.00014 3E-09 61.1 6.4 104 35-141 18-134 (233)
140 PF05057 DUF676: Putative seri 97.5 0.00017 3.7E-09 59.9 5.1 88 37-128 6-96 (217)
141 PF00151 Lipase: Lipase; Inte 97.5 5.7E-05 1.2E-09 66.6 2.1 102 34-142 70-185 (331)
142 KOG3975 Uncharacterized conser 97.5 0.02 4.3E-07 47.6 16.5 245 34-291 28-300 (301)
143 PF06441 EHN: Epoxide hydrolas 97.4 0.00036 7.9E-09 51.2 5.0 45 11-55 68-112 (112)
144 COG1073 Hydrolases of the alph 97.4 0.01 2.2E-07 50.9 14.9 60 234-293 233-296 (299)
145 PRK04940 hypothetical protein; 97.3 0.052 1.1E-06 43.3 16.9 51 236-292 127-178 (180)
146 COG4814 Uncharacterized protei 97.3 0.031 6.7E-07 46.6 15.4 105 36-145 46-177 (288)
147 PF05705 DUF829: Eukaryotic pr 97.2 0.059 1.3E-06 45.3 17.0 61 231-291 176-240 (240)
148 PF05577 Peptidase_S28: Serine 97.1 0.0033 7.2E-08 57.9 10.0 92 54-146 50-150 (434)
149 KOG2100 Dipeptidyl aminopeptid 97.1 0.066 1.4E-06 52.7 19.2 221 16-292 503-745 (755)
150 PF06057 VirJ: Bacterial virul 97.1 0.029 6.3E-07 45.0 13.5 92 37-141 4-104 (192)
151 KOG3253 Predicted alpha/beta h 97.0 0.0096 2.1E-07 55.3 11.2 47 231-277 302-348 (784)
152 PF11339 DUF3141: Protein of u 97.0 0.087 1.9E-06 48.5 17.0 80 53-146 92-177 (581)
153 KOG1553 Predicted alpha/beta h 96.8 0.011 2.3E-07 51.4 8.8 99 35-144 243-344 (517)
154 PF00756 Esterase: Putative es 96.7 0.0044 9.6E-08 52.3 6.3 107 33-141 22-147 (251)
155 COG1075 LipA Predicted acetylt 96.7 0.0072 1.6E-07 53.6 7.7 100 36-145 60-165 (336)
156 PF10142 PhoPQ_related: PhoPQ- 96.6 0.06 1.3E-06 48.1 13.2 60 231-293 260-319 (367)
157 COG4099 Predicted peptidase [G 96.6 0.029 6.3E-07 47.9 10.3 101 36-142 192-302 (387)
158 COG2936 Predicted acyl esteras 96.4 0.028 6E-07 52.6 9.7 124 14-144 22-159 (563)
159 cd00312 Esterase_lipase Estera 96.2 0.034 7.4E-07 52.0 9.5 105 33-144 93-213 (493)
160 KOG2182 Hydrolytic enzymes of 96.2 0.049 1.1E-06 49.7 9.9 110 35-145 86-208 (514)
161 PF04083 Abhydro_lipase: Parti 96.0 0.014 3.1E-07 38.0 4.2 36 17-52 19-60 (63)
162 PF05677 DUF818: Chlamydia CHL 95.9 0.16 3.4E-06 44.5 11.3 81 36-129 138-234 (365)
163 KOG2551 Phospholipase/carboxyh 95.8 0.029 6.3E-07 45.8 6.1 59 231-293 161-219 (230)
164 PRK10439 enterobactin/ferric e 95.8 0.11 2.4E-06 47.5 10.6 102 34-142 208-321 (411)
165 PF03403 PAF-AH_p_II: Platelet 95.6 0.013 2.8E-07 52.9 3.9 39 34-72 99-137 (379)
166 COG4782 Uncharacterized protei 95.5 0.043 9.4E-07 48.2 6.6 104 34-140 115-230 (377)
167 PF02450 LCAT: Lecithin:choles 95.5 0.12 2.5E-06 47.0 9.6 113 15-147 34-163 (389)
168 PLN02213 sinapoylglucose-malat 95.4 0.046 9.9E-07 48.2 6.7 60 233-293 233-316 (319)
169 PF12048 DUF3530: Protein of u 95.2 0.43 9.3E-06 41.9 12.1 61 11-72 62-127 (310)
170 COG2272 PnbA Carboxylesterase 95.1 0.18 3.9E-06 46.2 9.4 109 33-144 92-217 (491)
171 PLN02606 palmitoyl-protein thi 95.0 0.36 7.8E-06 41.8 10.6 99 36-147 27-135 (306)
172 PLN02209 serine carboxypeptida 94.6 0.12 2.5E-06 47.6 7.1 60 233-293 351-434 (437)
173 PLN03016 sinapoylglucose-malat 94.5 0.13 2.9E-06 47.2 7.2 60 233-293 347-430 (433)
174 COG3150 Predicted esterase [Ge 94.4 0.37 8E-06 37.8 8.3 84 38-141 2-88 (191)
175 COG1505 Serine proteases of th 93.9 1.2 2.6E-05 42.0 11.9 123 16-144 400-534 (648)
176 PF00135 COesterase: Carboxyle 93.1 0.46 9.9E-06 44.7 8.4 107 34-144 124-245 (535)
177 KOG1282 Serine carboxypeptidas 93.0 0.27 5.9E-06 45.2 6.3 60 234-293 364-447 (454)
178 PLN02633 palmitoyl protein thi 92.7 1.6 3.5E-05 37.9 10.2 101 36-146 26-133 (314)
179 COG0627 Predicted esterase [Ge 92.0 0.96 2.1E-05 39.7 8.3 106 35-142 54-185 (316)
180 PF02089 Palm_thioest: Palmito 92.0 0.22 4.8E-06 42.6 4.2 105 36-147 6-119 (279)
181 KOG2183 Prolylcarboxypeptidase 91.4 0.98 2.1E-05 40.6 7.5 105 36-145 81-203 (492)
182 PF10340 DUF2424: Protein of u 89.8 7.4 0.00016 35.0 11.7 104 35-147 122-237 (374)
183 KOG3724 Negative regulator of 89.4 0.54 1.2E-05 45.6 4.6 97 35-146 89-222 (973)
184 PF06259 Abhydrolase_8: Alpha/ 89.3 9.5 0.00021 30.5 11.0 118 26-146 10-146 (177)
185 KOG2541 Palmitoyl protein thio 89.1 7.1 0.00015 33.2 10.4 99 36-147 24-131 (296)
186 PF07082 DUF1350: Protein of u 89.1 1.4 3.1E-05 36.9 6.4 38 34-71 16-56 (250)
187 KOG3967 Uncharacterized conser 88.6 6.7 0.00015 32.2 9.6 105 35-144 101-227 (297)
188 KOG4840 Predicted hydrolases o 88.3 3.9 8.4E-05 33.8 8.1 90 37-140 38-140 (299)
189 COG4553 DepA Poly-beta-hydroxy 86.6 10 0.00022 32.8 9.9 106 35-146 103-211 (415)
190 KOG3847 Phospholipase A2 (plat 85.0 0.97 2.1E-05 39.2 3.3 43 34-76 117-159 (399)
191 PLN03016 sinapoylglucose-malat 83.8 17 0.00037 33.5 11.1 99 15-114 41-171 (433)
192 PLN02517 phosphatidylcholine-s 83.2 3.6 7.7E-05 39.2 6.3 91 49-146 156-265 (642)
193 KOG3101 Esterase D [General fu 81.0 1.4 3E-05 36.1 2.5 106 35-145 44-176 (283)
194 PLN02209 serine carboxypeptida 80.2 46 0.00099 30.8 12.4 67 11-78 39-134 (437)
195 cd00741 Lipase Lipase. Lipase 78.9 5.3 0.00011 30.7 5.3 51 93-145 10-68 (153)
196 PF06850 PHB_depo_C: PHB de-po 77.7 4.1 8.9E-05 32.9 4.2 61 233-293 134-201 (202)
197 COG2939 Carboxypeptidase C (ca 77.2 17 0.00037 33.8 8.6 30 263-293 461-490 (498)
198 KOG2237 Predicted serine prote 76.7 7.7 0.00017 37.1 6.3 109 34-144 469-583 (712)
199 PF04301 DUF452: Protein of un 76.1 25 0.00055 29.0 8.6 36 237-276 169-204 (213)
200 KOG1551 Uncharacterized conser 72.4 10 0.00022 32.3 5.4 56 236-293 309-365 (371)
201 COG3727 Vsr DNA G:T-mismatch r 71.6 15 0.00033 27.6 5.5 53 16-68 32-114 (150)
202 PF09949 DUF2183: Uncharacteri 70.3 23 0.00051 25.3 6.3 83 50-139 12-97 (100)
203 COG2382 Fes Enterochelin ester 70.1 12 0.00027 32.3 5.6 29 116-145 183-212 (299)
204 PF05576 Peptidase_S37: PS-10 70.0 22 0.00048 32.4 7.3 104 35-145 63-170 (448)
205 COG3946 VirJ Type IV secretory 69.2 16 0.00034 33.1 6.2 58 52-121 277-337 (456)
206 PF07519 Tannase: Tannase and 68.0 8.9 0.00019 35.8 4.7 61 233-293 353-426 (474)
207 COG4287 PqaA PhoPQ-activated p 67.2 6 0.00013 35.3 3.2 45 231-275 327-371 (507)
208 PF01764 Lipase_3: Lipase (cla 66.2 17 0.00037 27.1 5.3 33 93-128 50-83 (140)
209 KOG1516 Carboxylesterase and r 66.1 31 0.00066 32.8 8.1 104 35-143 112-231 (545)
210 KOG1282 Serine carboxypeptidas 61.0 83 0.0018 29.3 9.5 66 12-78 45-134 (454)
211 KOG4372 Predicted alpha/beta h 58.9 3.5 7.7E-05 37.1 0.3 85 37-127 82-167 (405)
212 PF11288 DUF3089: Protein of u 56.9 25 0.00054 28.9 4.9 64 56-122 40-107 (207)
213 PRK05579 bifunctional phosphop 56.8 1.4E+02 0.0031 27.3 10.2 59 51-116 135-196 (399)
214 TIGR02764 spore_ybaN_pdaB poly 56.8 6.5 0.00014 31.6 1.5 34 36-69 152-188 (191)
215 KOG2551 Phospholipase/carboxyh 56.3 12 0.00026 30.9 3.0 36 35-71 5-44 (230)
216 KOG2872 Uroporphyrinogen decar 56.2 45 0.00098 28.8 6.3 74 35-116 252-336 (359)
217 KOG2369 Lecithin:cholesterol a 56.0 23 0.00049 32.7 4.9 85 49-145 124-226 (473)
218 COG1770 PtrB Protease II [Amin 55.7 1.1E+02 0.0024 29.8 9.4 122 21-144 434-561 (682)
219 PF05277 DUF726: Protein of un 54.3 33 0.00071 30.6 5.5 38 107-146 219-262 (345)
220 KOG2521 Uncharacterized conser 54.0 1.7E+02 0.0036 26.3 13.0 61 233-293 225-289 (350)
221 TIGR00521 coaBC_dfp phosphopan 53.6 1.2E+02 0.0026 27.7 9.2 60 50-116 130-193 (390)
222 PF05576 Peptidase_S37: PS-10 51.8 18 0.00039 32.9 3.5 56 233-291 351-411 (448)
223 COG2230 Cfa Cyclopropane fatty 50.8 43 0.00094 28.9 5.6 50 91-140 55-104 (283)
224 TIGR02884 spore_pdaA delta-lac 50.2 12 0.00027 31.0 2.2 35 36-70 187-222 (224)
225 COG2819 Predicted hydrolase of 50.0 34 0.00073 29.2 4.7 46 94-141 121-169 (264)
226 COG0218 Predicted GTPase [Gene 49.9 15 0.00032 29.9 2.5 16 65-80 72-87 (200)
227 cd00519 Lipase_3 Lipase (class 47.3 43 0.00094 27.6 5.1 30 115-145 133-168 (229)
228 TIGR02873 spore_ylxY probable 47.3 15 0.00032 31.5 2.3 34 36-69 231-264 (268)
229 PF06309 Torsin: Torsin; Inte 46.3 26 0.00056 26.3 3.1 27 32-58 49-77 (127)
230 PLN02213 sinapoylglucose-malat 44.9 90 0.002 27.4 6.9 59 63-122 2-64 (319)
231 PLN02310 triacylglycerol lipas 44.7 75 0.0016 29.0 6.4 51 93-145 191-249 (405)
232 PLN02454 triacylglycerol lipas 43.1 75 0.0016 29.1 6.1 14 115-128 233-247 (414)
233 PF05577 Peptidase_S28: Serine 42.9 40 0.00087 31.0 4.6 48 234-285 377-429 (434)
234 COG0529 CysC Adenylylsulfate k 42.4 40 0.00087 27.1 3.8 35 35-69 22-58 (197)
235 PLN02408 phospholipase A1 41.0 60 0.0013 29.2 5.1 35 93-128 184-219 (365)
236 PLN02571 triacylglycerol lipas 40.1 52 0.0011 30.1 4.7 36 91-128 208-245 (413)
237 PF11187 DUF2974: Protein of u 40.1 67 0.0015 26.7 5.1 48 95-146 73-125 (224)
238 PLN02162 triacylglycerol lipas 39.8 79 0.0017 29.4 5.8 50 94-146 265-323 (475)
239 PF03610 EIIA-man: PTS system 37.0 1.1E+02 0.0024 22.1 5.4 61 37-113 2-63 (116)
240 PF01083 Cutinase: Cutinase; 35.8 79 0.0017 25.1 4.7 51 93-146 67-124 (179)
241 TIGR02683 upstrm_HI1419 probab 35.2 45 0.00098 23.4 2.9 22 20-46 57-78 (95)
242 PF03283 PAE: Pectinacetyleste 34.6 1.1E+02 0.0024 27.6 5.8 51 94-145 141-196 (361)
243 PF11144 DUF2920: Protein of u 34.1 1E+02 0.0022 28.1 5.5 40 34-74 34-77 (403)
244 PF02129 Peptidase_S15: X-Pro 34.1 54 0.0012 27.9 3.7 43 231-274 226-271 (272)
245 PF02540 NAD_synthase: NAD syn 34.0 93 0.002 26.2 5.0 45 91-139 3-52 (242)
246 KOG1202 Animal-type fatty acid 33.5 2.2E+02 0.0047 30.4 7.9 92 35-142 2123-2217(2376)
247 TIGR02883 spore_cwlD N-acetylm 33.5 99 0.0021 24.8 5.0 13 65-78 2-14 (189)
248 PLN02324 triacylglycerol lipas 33.4 87 0.0019 28.7 5.0 34 93-127 199-233 (415)
249 PF00326 Peptidase_S9: Prolyl 33.3 63 0.0014 26.1 3.9 60 35-103 144-208 (213)
250 PHA02114 hypothetical protein 33.2 56 0.0012 23.2 2.9 35 36-70 83-117 (127)
251 PLN03037 lipase class 3 family 33.1 1.4E+02 0.003 28.3 6.3 51 93-145 300-359 (525)
252 PF03403 PAF-AH_p_II: Platelet 32.8 17 0.00036 33.0 0.4 27 116-142 234-260 (379)
253 TIGR03712 acc_sec_asp2 accesso 32.5 2.3E+02 0.005 26.6 7.5 98 35-145 289-390 (511)
254 PLN00413 triacylglycerol lipas 32.1 1.4E+02 0.0031 27.9 6.2 50 93-145 270-328 (479)
255 PF00448 SRP54: SRP54-type pro 31.6 1.6E+02 0.0035 23.8 5.9 72 54-140 75-148 (196)
256 COG2939 Carboxypeptidase C (ca 31.5 54 0.0012 30.7 3.4 61 17-78 82-163 (498)
257 TIGR03709 PPK2_rel_1 polyphosp 31.2 42 0.0009 28.7 2.5 37 35-71 55-93 (264)
258 COG4947 Uncharacterized protei 31.2 1.7E+02 0.0038 23.4 5.6 29 115-143 106-135 (227)
259 KOG1283 Serine carboxypeptidas 30.4 3.5E+02 0.0075 24.1 7.8 30 263-292 383-412 (414)
260 KOG4022 Dihydropteridine reduc 30.3 1.5E+02 0.0033 23.4 5.2 26 53-78 18-43 (236)
261 cd03818 GT1_ExpC_like This fam 30.2 81 0.0018 28.3 4.4 38 38-77 2-39 (396)
262 PF05973 Gp49: Phage derived p 30.0 63 0.0014 22.2 2.9 24 19-47 51-74 (91)
263 cd00006 PTS_IIA_man PTS_IIA, P 29.4 2.3E+02 0.0049 20.7 6.3 61 37-113 3-63 (122)
264 PF11144 DUF2920: Protein of u 29.2 1.7E+02 0.0037 26.7 6.1 36 233-268 293-331 (403)
265 TIGR03707 PPK2_P_aer polyphosp 29.1 51 0.0011 27.6 2.6 37 35-71 30-68 (230)
266 COG1866 PckA Phosphoenolpyruva 27.1 73 0.0016 29.5 3.3 32 90-123 403-434 (529)
267 cd08769 DAP_dppA_2 Peptidase M 27.0 2E+02 0.0043 24.8 5.9 52 231-289 145-198 (270)
268 PLN02802 triacylglycerol lipas 27.0 1.3E+02 0.0027 28.5 4.9 51 93-145 314-371 (509)
269 COG4822 CbiK Cobalamin biosynt 26.3 1.2E+02 0.0025 25.2 4.1 31 87-117 114-147 (265)
270 PF02230 Abhydrolase_2: Phosph 26.2 1.8E+02 0.0039 23.5 5.5 57 35-103 155-214 (216)
271 PRK14581 hmsF outer membrane N 26.2 1.2E+02 0.0026 29.8 4.9 79 35-113 48-140 (672)
272 COG3933 Transcriptional antite 26.1 3.4E+02 0.0073 25.3 7.3 68 36-122 110-177 (470)
273 KOG2385 Uncharacterized conser 25.3 1.3E+02 0.0029 28.4 4.7 39 106-146 445-489 (633)
274 PRK10319 N-acetylmuramoyl-l-al 25.1 1.7E+02 0.0036 25.5 5.1 16 62-78 55-70 (287)
275 PF08197 TT_ORF2a: pORF2a trun 24.1 44 0.00095 19.7 0.9 13 64-76 36-48 (49)
276 COG1255 Uncharacterized protei 22.9 70 0.0015 23.6 2.0 24 48-71 22-45 (129)
277 PRK13982 bifunctional SbtC-lik 22.7 6.5E+02 0.014 23.7 10.2 45 51-102 199-247 (475)
278 cd01714 ETF_beta The electron 22.4 4.2E+02 0.0092 21.4 7.2 39 89-129 92-133 (202)
279 PRK07313 phosphopantothenoylcy 22.0 2E+02 0.0044 22.9 4.8 30 47-77 128-160 (182)
280 COG1506 DAP2 Dipeptidyl aminop 21.8 2.7E+02 0.0059 27.1 6.5 43 35-77 551-598 (620)
281 PF02670 DXP_reductoisom: 1-de 21.6 1.3E+02 0.0029 22.6 3.4 25 116-142 5-32 (129)
282 PF13207 AAA_17: AAA domain; P 21.4 73 0.0016 22.9 2.0 38 38-77 1-41 (121)
283 PLN02753 triacylglycerol lipas 21.0 1.9E+02 0.0042 27.4 4.9 35 93-127 293-330 (531)
284 KOG2941 Beta-1,4-mannosyltrans 20.9 94 0.002 27.9 2.8 38 36-77 14-52 (444)
285 PLN02761 lipase class 3 family 20.8 2E+02 0.0043 27.3 5.0 36 92-127 273-312 (527)
286 PF03976 PPK2: Polyphosphate k 20.6 44 0.00096 27.9 0.7 37 35-71 30-68 (228)
287 PF03205 MobB: Molybdopterin g 20.5 1.4E+02 0.0031 22.6 3.5 43 37-79 1-45 (140)
288 KOG0636 ATP sulfurylase (sulfa 20.5 1.2E+02 0.0026 27.2 3.3 44 28-71 355-398 (466)
289 PLN02719 triacylglycerol lipas 20.5 2.1E+02 0.0045 27.1 5.1 35 93-127 279-316 (518)
290 PF01583 APS_kinase: Adenylyls 20.2 1.3E+02 0.0029 23.4 3.3 35 36-70 2-38 (156)
291 KOG1283 Serine carboxypeptidas 20.0 65 0.0014 28.4 1.6 84 35-123 31-136 (414)
No 1
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=100.00 E-value=1e-34 Score=244.73 Aligned_cols=267 Identities=27% Similarity=0.443 Sum_probs=178.0
Q ss_pred ceeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHH
Q 022534 12 YGSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTEN 91 (295)
Q Consensus 12 ~~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~ 91 (295)
...|++++|+++||.+.|+++ .|.|+++||++++|.+|+++++.|+.+||||+|+|+||+|.||.|... ..|+++
T Consensus 23 ~hk~~~~~gI~~h~~e~g~~~--gP~illlHGfPe~wyswr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~---~~Yt~~ 97 (322)
T KOG4178|consen 23 SHKFVTYKGIRLHYVEGGPGD--GPIVLLLHGFPESWYSWRHQIPGLASRGYRVIAPDLRGYGFSDAPPHI---SEYTID 97 (322)
T ss_pred ceeeEEEccEEEEEEeecCCC--CCEEEEEccCCccchhhhhhhhhhhhcceEEEecCCCCCCCCCCCCCc---ceeeHH
Confidence 467889999999999988755 479999999999999999999999988899999999999999998643 478999
Q ss_pred HHHHHHHHHHHHhCCCCceEEEEecccchH-HHHHHHHhCcCccceeEEEcCCCCCCCCCch--h---hh------hhhc
Q 022534 92 EFHEELDKLLDVLEVKYPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNSPLTASSPLPG--L---FQ------QLRI 159 (295)
Q Consensus 92 ~~~~~l~~~~~~l~~~~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~--~---~~------~~~~ 159 (295)
.++.|+..++++++.++ ++++ ||.+|+ +|..+|+.+|++|+++++++.|...+...+- . +. ..+.
T Consensus 98 ~l~~di~~lld~Lg~~k-~~lv--gHDwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~~~fQ~ 174 (322)
T KOG4178|consen 98 ELVGDIVALLDHLGLKK-AFLV--GHDWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLKPLDSSKAIFGKSYYICLFQE 174 (322)
T ss_pred HHHHHHHHHHHHhccce-eEEE--eccchhHHHHHHHHhChhhcceEEEecCCCCCcccchhhhhccccCccceeEeccc
Confidence 99999999999999886 5666 677776 5889999999999999999877652111110 0 00 0111
Q ss_pred ccchh--hhhhh-HHHHHHHHHhCCCcccccc----c-------ccc--ccccccccCCchh-HHHHHHHhcchhhhhHh
Q 022534 160 PLLGE--FTAQN-AIMAERFIEAGSPYVLKLD----K-------ADV--YRLPYLASSGPGF-ALLEAARKVNFKDISSR 222 (295)
Q Consensus 160 ~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~----~-------~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 222 (295)
+...+ +.... ..+...+...+.+...... . .++ +...+....-.|. -.+..++. .. .
T Consensus 175 ~~~~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~g~~gplNyyrn~~r----~w--~ 248 (322)
T KOG4178|consen 175 PGKPETELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQIDGFTGPLNYYRNFRR----NW--E 248 (322)
T ss_pred cCcchhhhccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhccccccccccchhhHHHhh----Cc--h
Confidence 11100 00000 1111122221111100000 0 000 0000000000000 01111110 00 0
Q ss_pred hhcCcCCCCCCCcEEEEEeCCCCCCCcc-hHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 223 IGAGFSSGSWDKPVLVAWGISDKYLPQS-VAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 223 ~~~~~~~~~~~~P~l~i~G~~D~~~~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
.......++++|+++|+|+.|.+.+.. ..+.+++.++...+.++++++||+++.|+|++++++|.+|+..
T Consensus 249 -a~~~~~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqqe~p~~v~~~i~~f~~~ 319 (322)
T KOG4178|consen 249 -AAPWALAKITIPVLFIWGDLDPVLPYPIFGELYRKDVPRLTERVVIEGIGHFVQQEKPQEVNQAILGFINS 319 (322)
T ss_pred -hccccccccccceEEEEecCcccccchhHHHHHHHhhccccceEEecCCcccccccCHHHHHHHHHHHHHh
Confidence 112223478999999999999998776 4566778888866899999999999999999999999999975
No 2
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=100.00 E-value=1.6e-33 Score=251.37 Aligned_cols=269 Identities=36% Similarity=0.669 Sum_probs=171.1
Q ss_pred eEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHH
Q 022534 15 YIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFH 94 (295)
Q Consensus 15 ~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~ 94 (295)
-++.++++++|.+.|+++ +++||||||+++++..|+.+++.|++ +|+|+++|+||||.|+++.... ...|++++++
T Consensus 109 ~~~~~~~~~~y~~~G~~~--~~~ivllHG~~~~~~~w~~~~~~L~~-~~~Via~DlpG~G~S~~p~~~~-~~~ys~~~~a 184 (383)
T PLN03084 109 QASSDLFRWFCVESGSNN--NPPVLLIHGFPSQAYSYRKVLPVLSK-NYHAIAFDWLGFGFSDKPQPGY-GFNYTLDEYV 184 (383)
T ss_pred EEcCCceEEEEEecCCCC--CCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCCcccc-cccCCHHHHH
Confidence 366789999999988653 46999999999999999999999986 7999999999999999865321 2367899999
Q ss_pred HHHHHHHHHhCCCCceEEEEecccchHHHHHHHHhCcCccceeEEEcCCCCCCC-CCchhhhhhhcccchhhhhhhHH-H
Q 022534 95 EELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRISKLAILNSPLTASS-PLPGLFQQLRIPLLGEFTAQNAI-M 172 (295)
Q Consensus 95 ~~l~~~~~~l~~~~~~~lv~~G~~~G~~~~~~a~~~p~~v~~lil~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~ 172 (295)
+++.++++++++++ ++|+|+|+ +|.+++.+|.++|++|+++|+++++..... ..+.....+...+.......... .
T Consensus 185 ~~l~~~i~~l~~~~-~~LvG~s~-GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~~p~~l~~~~~~l~~~~~~~~~~~~ 262 (383)
T PLN03084 185 SSLESLIDELKSDK-VSLVVQGY-FSPPVVKYASAHPDKIKKLILLNPPLTKEHAKLPSTLSEFSNFLLGEIFSQDPLRA 262 (383)
T ss_pred HHHHHHHHHhCCCC-ceEEEECH-HHHHHHHHHHhChHhhcEEEEECCCCccccccchHHHHHHHHHHhhhhhhcchHHH
Confidence 99999999999875 67775553 456788899999999999999987643211 01111111111011000000000 0
Q ss_pred HHHHHHhCCCccccccccccccccccccCCchhHH---HHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCc
Q 022534 173 AERFIEAGSPYVLKLDKADVYRLPYLASSGPGFAL---LEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQ 249 (295)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~ 249 (295)
...++....+..+.......+..++......+..+ ...+.. .++.....+...+....+++|+|+|+|++|.+++.
T Consensus 263 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~-~l~~~~~~l~~~l~~~~i~vPvLiI~G~~D~~v~~ 341 (383)
T PLN03084 263 SDKALTSCGPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKK-ELKKYIEEMRSILTDKNWKTPITVCWGLRDRWLNY 341 (383)
T ss_pred HhhhhcccCccCCCHHHHHHHhccccCCcchHHHHHHHHHHhhc-ccchhhHHHHhhhccccCCCCEEEEeeCCCCCcCH
Confidence 00111000010011111111111111111111111 111110 11111111111111236799999999999999999
Q ss_pred chHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHH
Q 022534 250 SVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFL 292 (295)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 292 (295)
+.++++++.. + ++++++++|||++++|+|+++++.|++|+.
T Consensus 342 ~~~~~~a~~~-~-a~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~ 382 (383)
T PLN03084 342 DGVEDFCKSS-Q-HKLIELPMAGHHVQEDCGEELGGIISGILS 382 (383)
T ss_pred HHHHHHHHhc-C-CeEEEECCCCCCcchhCHHHHHHHHHHHhh
Confidence 8888888763 4 699999999999999999999999999985
No 3
>PRK00870 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=1.8e-33 Score=245.82 Aligned_cols=271 Identities=27% Similarity=0.387 Sum_probs=174.6
Q ss_pred cccc--cccccceeeEEeCc-----EEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCC
Q 022534 3 SRIE--NKGREYGSYIKSGE-----YRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGF 75 (295)
Q Consensus 3 ~~~~--~~~~~~~~~~~~~~-----~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~ 75 (295)
+++| +.+|--+.++++++ ++++|.+.|+++ .|+|||+||+++++..|..+++.|.+.||+|+++|+||||+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~y~~~G~~~--~~~lvliHG~~~~~~~w~~~~~~L~~~gy~vi~~Dl~G~G~ 86 (302)
T PRK00870 9 SRFENLPDYPFAPHYVDVDDGDGGPLRMHYVDEGPAD--GPPVLLLHGEPSWSYLYRKMIPILAAAGHRVIAPDLIGFGR 86 (302)
T ss_pred ccccCCcCCCCCceeEeecCCCCceEEEEEEecCCCC--CCEEEEECCCCCchhhHHHHHHHHHhCCCEEEEECCCCCCC
Confidence 5778 77888899999999 999999988653 36999999999999999999999986689999999999999
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCC-Cchh
Q 022534 76 SDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSP-LPGL 153 (295)
Q Consensus 76 S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~-~~~~ 153 (295)
|+.+.. ..+|+.+++++++.+++++++.++ ++++ |||+| .++..+|.++|++|++++++++....... .+..
T Consensus 87 S~~~~~---~~~~~~~~~a~~l~~~l~~l~~~~-v~lv--GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 160 (302)
T PRK00870 87 SDKPTR---REDYTYARHVEWMRSWFEQLDLTD-VTLV--CQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPMPDA 160 (302)
T ss_pred CCCCCC---cccCCHHHHHHHHHHHHHHcCCCC-EEEE--EEChHHHHHHHHHHhChhheeEEEEeCCCCCCccccchHH
Confidence 987532 225688999999999999998875 6676 67766 57888999999999999998653211110 0111
Q ss_pred hhhhhcccchhhhhhhHHHHHHHHHhCCCcccccccccccccccccc-CCchhHHHHHHHhc--------chhhhhHhhh
Q 022534 154 FQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLAS-SGPGFALLEAARKV--------NFKDISSRIG 224 (295)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--------~~~~~~~~~~ 224 (295)
+..... +.... . ......+................+..++... .............. ...+....
T Consensus 161 ~~~~~~-~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 234 (302)
T PRK00870 161 FWAWRA-FSQYS-P--VLPVGRLVNGGTVRDLSDAVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAVAANRAAWAV-- 234 (302)
T ss_pred Hhhhhc-ccccC-c--hhhHHHHhhccccccCCHHHHHHhhcccCChhhhcchhhhhhcCCCCCCCcchHHHHHHHHh--
Confidence 111000 00000 0 0000001100000000000000000000000 00000000000000 00000111
Q ss_pred cCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeE---EEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 225 AGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVK---LQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 225 ~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~---~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
..++++|+++|+|++|++++... +++.+.+++ ++ +.+++++||++++|+|++|++.|.+|+..
T Consensus 235 ----l~~i~~P~lii~G~~D~~~~~~~-~~~~~~~~~-~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~ 300 (302)
T PRK00870 235 ----LERWDKPFLTAFSDSDPITGGGD-AILQKRIPG-AAGQPHPTIKGAGHFLQEDSGEELAEAVLEFIRA 300 (302)
T ss_pred ----hhcCCCceEEEecCCCCcccCch-HHHHhhccc-ccccceeeecCCCccchhhChHHHHHHHHHHHhc
Confidence 13679999999999999998766 888888886 44 88999999999999999999999999975
No 4
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=100.00 E-value=3.3e-33 Score=241.13 Aligned_cols=261 Identities=15% Similarity=0.159 Sum_probs=169.2
Q ss_pred ccceeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCC
Q 022534 10 REYGSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFT 89 (295)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~ 89 (295)
|-|+++++++|++++|...+.++ .+++|||+||+++++..|..+++.|.+ +|+|+++|+||||+|+.+.. .|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~-~~~plvllHG~~~~~~~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~-----~~~ 73 (276)
T TIGR02240 1 PFIFRTIDLDGQSIRTAVRPGKE-GLTPLLIFNGIGANLELVFPFIEALDP-DLEVIAFDVPGVGGSSTPRH-----PYR 73 (276)
T ss_pred CeeEEEeccCCcEEEEEEecCCC-CCCcEEEEeCCCcchHHHHHHHHHhcc-CceEEEECCCCCCCCCCCCC-----cCc
Confidence 45889999999999998764222 246999999999999999999999986 79999999999999986532 357
Q ss_pred HHHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCC--CCCchhhhhhhcccchhhh
Q 022534 90 ENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTAS--SPLPGLFQQLRIPLLGEFT 166 (295)
Q Consensus 90 ~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~--~~~~~~~~~~~~~~~~~~~ 166 (295)
.+++++++.++++.+++++ ++|+ |||+| .+++.+|.++|++|+++|+++++.... ...+........+ ..+.
T Consensus 74 ~~~~~~~~~~~i~~l~~~~-~~Lv--G~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 148 (276)
T TIGR02240 74 FPGLAKLAARMLDYLDYGQ-VNAI--GVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKPKVLMMMASP--RRYI 148 (276)
T ss_pred HHHHHHHHHHHHHHhCcCc-eEEE--EECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCchhHHHHhcCc--hhhh
Confidence 8899999999999998875 6777 66665 578899999999999999997654321 1111100000000 0000
Q ss_pred hh-hH-HHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCC
Q 022534 167 AQ-NA-IMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISD 244 (295)
Q Consensus 167 ~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D 244 (295)
.. .. .....+... ......................+. .......... ..... .++++||+|+|+|++|
T Consensus 149 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~------l~~i~~P~lii~G~~D 218 (276)
T TIGR02240 149 QPSHGIHIAPDIYGG--AFRRDPELAMAHASKVRSGGKLGY-YWQLFAGLGW-TSIHW------LHKIQQPTLVLAGDDD 218 (276)
T ss_pred ccccccchhhhhccc--eeeccchhhhhhhhhcccCCCchH-HHHHHHHcCC-chhhH------hhcCCCCEEEEEeCCC
Confidence 00 00 000000000 000000000000000000000000 0000000000 00111 1377999999999999
Q ss_pred CCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHhc
Q 022534 245 KYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLNY 294 (295)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (295)
++++++.++++.+.+++ ++++++++ ||++++|+|++|++.|.+|+++.
T Consensus 219 ~~v~~~~~~~l~~~~~~-~~~~~i~~-gH~~~~e~p~~~~~~i~~fl~~~ 266 (276)
T TIGR02240 219 PIIPLINMRLLAWRIPN-AELHIIDD-GHLFLITRAEAVAPIIMKFLAEE 266 (276)
T ss_pred CcCCHHHHHHHHHhCCC-CEEEEEcC-CCchhhccHHHHHHHHHHHHHHh
Confidence 99999999999999997 79999975 99999999999999999999863
No 5
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=7.2e-33 Score=241.11 Aligned_cols=266 Identities=20% Similarity=0.272 Sum_probs=168.4
Q ss_pred eeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCC--CCCCCCH
Q 022534 13 GSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGY--DDFDFTE 90 (295)
Q Consensus 13 ~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~--~~~~~~~ 90 (295)
..+++.+|.+++|.+.|++ .++|||+||+++++..|..+++.|++ .|+|+++|+||||.|+.+.... ....|++
T Consensus 10 ~~~~~~~~~~i~y~~~G~~---~~~vlllHG~~~~~~~w~~~~~~L~~-~~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~ 85 (294)
T PLN02824 10 TRTWRWKGYNIRYQRAGTS---GPALVLVHGFGGNADHWRKNTPVLAK-SHRVYAIDLLGYGYSDKPNPRSAPPNSFYTF 85 (294)
T ss_pred CceEEEcCeEEEEEEcCCC---CCeEEEECCCCCChhHHHHHHHHHHh-CCeEEEEcCCCCCCCCCCccccccccccCCH
Confidence 4588899999999998853 25899999999999999999999986 5899999999999999754210 0225788
Q ss_pred HHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCC--CCCchhhh----hhhccc--
Q 022534 91 NEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTAS--SPLPGLFQ----QLRIPL-- 161 (295)
Q Consensus 91 ~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~--~~~~~~~~----~~~~~~-- 161 (295)
+++++++.+++++++.++ ++++ |||+| .+++.+|+++|++|+++|+++++.... ...+.... .+...+
T Consensus 86 ~~~a~~l~~~l~~l~~~~-~~lv--GhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (294)
T PLN02824 86 ETWGEQLNDFCSDVVGDP-AFVI--CNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLLRE 162 (294)
T ss_pred HHHHHHHHHHHHHhcCCC-eEEE--EeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccchhhhHHHHHHHHHHhc
Confidence 999999999999998864 6777 67765 578899999999999999997643211 11111000 000000
Q ss_pred --chhhhhh---hHHHHHHHHHh--CCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCC
Q 022534 162 --LGEFTAQ---NAIMAERFIEA--GSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDK 234 (295)
Q Consensus 162 --~~~~~~~---~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (295)
....... .......++.. .....+.......+..+... ......+............... ..++++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~------l~~i~~ 235 (294)
T PLN02824 163 TAVGKAFFKSVATPETVKNILCQCYHDDSAVTDELVEAILRPGLE-PGAVDVFLDFISYSGGPLPEEL------LPAVKC 235 (294)
T ss_pred hhHHHHHHHhhcCHHHHHHHHHHhccChhhccHHHHHHHHhccCC-chHHHHHHHHhccccccchHHH------HhhcCC
Confidence 0000000 00000011000 00000000000000000000 0000011111000000000011 136799
Q ss_pred cEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 235 PVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 235 P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
|+|+|+|++|++++.+.++.+.+..++ +++++++++||++++|+|++|++.|.+|+.+
T Consensus 236 P~lvi~G~~D~~~~~~~~~~~~~~~~~-~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (294)
T PLN02824 236 PVLIAWGEKDPWEPVELGRAYANFDAV-EDFIVLPGVGHCPQDEAPELVNPLIESFVAR 293 (294)
T ss_pred CeEEEEecCCCCCChHHHHHHHhcCCc-cceEEeCCCCCChhhhCHHHHHHHHHHHHhc
Confidence 999999999999999888888887776 6999999999999999999999999999975
No 6
>PRK03204 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=1.7e-32 Score=237.84 Aligned_cols=268 Identities=22% Similarity=0.394 Sum_probs=169.2
Q ss_pred cccccceeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCC
Q 022534 7 NKGREYGSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDF 86 (295)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~ 86 (295)
|..+-.+.|++++|.++||.+.|. .++|||+||++.++..|..+++.|.+ +|+|+++|+||||.|+++.. .
T Consensus 10 ~~~~~~~~~~~~~~~~i~y~~~G~----~~~iv~lHG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~----~ 80 (286)
T PRK03204 10 QLYPFESRWFDSSRGRIHYIDEGT----GPPILLCHGNPTWSFLYRDIIVALRD-RFRCVAPDYLGFGLSERPSG----F 80 (286)
T ss_pred ccccccceEEEcCCcEEEEEECCC----CCEEEEECCCCccHHHHHHHHHHHhC-CcEEEEECCCCCCCCCCCCc----c
Confidence 577788999999999999999884 25899999999999999999999985 79999999999999987542 2
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCch-hhhhhh--cccc
Q 022534 87 DFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPG-LFQQLR--IPLL 162 (295)
Q Consensus 87 ~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~-~~~~~~--~~~~ 162 (295)
.|+.+++++++.+++++++.++ ++++ |||+| .++..+|+.+|++|+++|+++++......... .+.... .+..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~-~~lv--G~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (286)
T PRK03204 81 GYQIDEHARVIGEFVDHLGLDR-YLSM--GQDWGGPISMAVAVERADRVRGVVLGNTWFWPADTLAMKAFSRVMSSPPVQ 157 (286)
T ss_pred ccCHHHHHHHHHHHHHHhCCCC-EEEE--EECccHHHHHHHHHhChhheeEEEEECccccCCCchhHHHHHHHhccccch
Confidence 4678999999999999998875 6676 66665 57888999999999999988654321110000 000000 0000
Q ss_pred hhhhhhhHHHHHHHHHhCCCccccccccccccccccccCCchh--HHHHHHHh-cchhhhhHhhhcCcCCCCCCCcEEEE
Q 022534 163 GEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGF--ALLEAARK-VNFKDISSRIGAGFSSGSWDKPVLVA 239 (295)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~P~l~i 239 (295)
.... .......++................+.. ....+.. .+...... ......+..+...+.....++||++|
T Consensus 158 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PtliI 233 (286)
T PRK03204 158 YAIL-RRNFFVERLIPAGTEHRPSSAVMAHYRA---VQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKPTLLV 233 (286)
T ss_pred hhhh-hhhHHHHHhccccccCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCCCeEEE
Confidence 0000 0011111111110000000000000000 0000000 00000000 00011111111111111128999999
Q ss_pred EeCCCCCCCcc-hHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHH
Q 022534 240 WGISDKYLPQS-VAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFF 291 (295)
Q Consensus 240 ~G~~D~~~~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 291 (295)
+|++|.++++. ..+.+.+.+++ .++++++++||++++|+|++|++.|.+||
T Consensus 234 ~G~~D~~~~~~~~~~~~~~~ip~-~~~~~i~~aGH~~~~e~Pe~~~~~i~~~~ 285 (286)
T PRK03204 234 WGMKDVAFRPKTILPRLRATFPD-HVLVELPNAKHFIQEDAPDRIAAAIIERF 285 (286)
T ss_pred ecCCCcccCcHHHHHHHHHhcCC-CeEEEcCCCcccccccCHHHHHHHHHHhc
Confidence 99999987554 56888899997 69999999999999999999999999997
No 7
>PRK03592 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=2.6e-32 Score=237.75 Aligned_cols=265 Identities=25% Similarity=0.416 Sum_probs=163.3
Q ss_pred eeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHH
Q 022534 13 GSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENE 92 (295)
Q Consensus 13 ~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~ 92 (295)
..+++++|.+++|.+.|++ ++|||+||+++++..|..+++.|+++ |+||++|+||||.|+.+.. .|+.++
T Consensus 9 ~~~~~~~g~~i~y~~~G~g----~~vvllHG~~~~~~~w~~~~~~L~~~-~~via~D~~G~G~S~~~~~-----~~~~~~ 78 (295)
T PRK03592 9 MRRVEVLGSRMAYIETGEG----DPIVFLHGNPTSSYLWRNIIPHLAGL-GRCLAPDLIGMGASDKPDI-----DYTFAD 78 (295)
T ss_pred ceEEEECCEEEEEEEeCCC----CEEEEECCCCCCHHHHHHHHHHHhhC-CEEEEEcCCCCCCCCCCCC-----CCCHHH
Confidence 4578889999999998853 58999999999999999999999874 7999999999999997642 358899
Q ss_pred HHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCC--Cchhh----hhhhcccchh-
Q 022534 93 FHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSP--LPGLF----QQLRIPLLGE- 164 (295)
Q Consensus 93 ~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~--~~~~~----~~~~~~~~~~- 164 (295)
+++|+.+++++++.++ ++++ |||+| .+++.+|.++|++|+++|+++++...... .+... ..++.+....
T Consensus 79 ~a~dl~~ll~~l~~~~-~~lv--GhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (295)
T PRK03592 79 HARYLDAWFDALGLDD-VVLV--GHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDFPPAVRELFQALRSPGEGEE 155 (295)
T ss_pred HHHHHHHHHHHhCCCC-eEEE--EECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhcchhHHHHHHHHhCcccccc
Confidence 9999999999999875 6777 66665 57889999999999999999763322110 01000 0001000000
Q ss_pred hhhhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcch----h---hhhHhhhcCcCCCCCCCcEE
Q 022534 165 FTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNF----K---DISSRIGAGFSSGSWDKPVL 237 (295)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~---~~~~~~~~~~~~~~~~~P~l 237 (295)
...........+........+.......++.++.. ................ . ......... ..+++||+|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~i~~P~l 232 (295)
T PRK03592 156 MVLEENVFIERVLPGSILRPLSDEEMAVYRRPFPT-PESRRPTLSWPRELPIDGEPADVVALVEEYAQW--LATSDVPKL 232 (295)
T ss_pred cccchhhHHhhcccCcccccCCHHHHHHHHhhcCC-chhhhhhhhhhhhcCCCCcchhhHhhhhHhHHH--hccCCCCeE
Confidence 00000000000100000000000000000000000 0000001111100000 0 000001000 136799999
Q ss_pred EEEeCCCCCCCcchHHHH-HhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHhc
Q 022534 238 VAWGISDKYLPQSVAEEF-QKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLNY 294 (295)
Q Consensus 238 ~i~G~~D~~~~~~~~~~~-~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (295)
+|+|++|+++++....++ .+..++ .+++++++|||++++|+|++|++.|.+|+.+.
T Consensus 233 ii~G~~D~~~~~~~~~~~~~~~~~~-~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~~~ 289 (295)
T PRK03592 233 LINAEPGAILTTGAIRDWCRSWPNQ-LEITVFGAGLHFAQEDSPEEIGAAIAAWLRRL 289 (295)
T ss_pred EEeccCCcccCcHHHHHHHHHhhhh-cceeeccCcchhhhhcCHHHHHHHHHHHHHHh
Confidence 999999999955555455 455665 79999999999999999999999999999863
No 8
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=1.5e-31 Score=238.93 Aligned_cols=264 Identities=23% Similarity=0.294 Sum_probs=162.7
Q ss_pred eeeEEeCcE-EEEEEEcCCCC--CCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCC
Q 022534 13 GSYIKSGEY-RWFVRETGSAD--SRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFT 89 (295)
Q Consensus 13 ~~~~~~~~~-~~~~~~~g~~~--~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~ 89 (295)
+.++..+|. +++|.+.|+++ +..|+|||+||+++++..|..+++.|++ +|+|+++|+||||+|+++.. ..|+
T Consensus 63 ~~~~~~~g~~~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~~w~~~~~~L~~-~~~via~Dl~G~G~S~~~~~----~~~~ 137 (360)
T PLN02679 63 CKKWKWKGEYSINYLVKGSPEVTSSGPPVLLVHGFGASIPHWRRNIGVLAK-NYTVYAIDLLGFGASDKPPG----FSYT 137 (360)
T ss_pred CceEEECCceeEEEEEecCcccCCCCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCCCC----cccc
Confidence 456666776 99999988641 1246899999999999999999999986 79999999999999997532 2468
Q ss_pred HHHHHHHHHHHHHHhCCCCceEEEEecccchH-HHHHHHH-hCcCccceeEEEcCCCCCCCC--Cchhhhhhhcccc---
Q 022534 90 ENEFHEELDKLLDVLEVKYPFFLVVQGFLVGS-YGLTWAL-KNPSRISKLAILNSPLTASSP--LPGLFQQLRIPLL--- 162 (295)
Q Consensus 90 ~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G~-~~~~~a~-~~p~~v~~lil~~~p~~~~~~--~~~~~~~~~~~~~--- 162 (295)
++++++++.++++++++++ ++|+ |||+|+ +++.+|+ .+|++|+++|+++++...... ..........+..
T Consensus 138 ~~~~a~~l~~~l~~l~~~~-~~lv--GhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (360)
T PLN02679 138 METWAELILDFLEEVVQKP-TVLI--GNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLI 214 (360)
T ss_pred HHHHHHHHHHHHHHhcCCC-eEEE--EECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhhhcchHHHH
Confidence 8999999999999998875 6676 777775 4566666 579999999999765322110 0000000000000
Q ss_pred hhhhhhh------------HHHHHHHHHh--CCCccccccccccccccccccCCchh-HHHHHHHhcchhhhhHhhhcCc
Q 022534 163 GEFTAQN------------AIMAERFIEA--GSPYVLKLDKADVYRLPYLASSGPGF-ALLEAARKVNFKDISSRIGAGF 227 (295)
Q Consensus 163 ~~~~~~~------------~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 227 (295)
..+.... .....+++.. ..+..+.....+.+..+.. ..... .+..........+....
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~----- 287 (360)
T PLN02679 215 DFLLKQRGIASALFNRVKQRDNLKNILLSVYGNKEAVDDELVEIIRGPAD--DEGALDAFVSIVTGPPGPNPIKL----- 287 (360)
T ss_pred HHHhhchhhHHHHHHHhcCHHHHHHHHHHhccCcccCCHHHHHHHHhhcc--CCChHHHHHHHHhcCCCCCHHHH-----
Confidence 0000000 0000011100 0000000000000000000 00000 11111100000011111
Q ss_pred CCCCCCCcEEEEEeCCCCCCCcch-----HHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 228 SSGSWDKPVLVAWGISDKYLPQSV-----AEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 228 ~~~~~~~P~l~i~G~~D~~~~~~~-----~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
..++++|||+|+|++|++++++. ...+.+.+++ ++++++++|||++++|+|++|++.|.+||.+
T Consensus 288 -l~~i~~PtLii~G~~D~~~p~~~~~~~~~~~l~~~ip~-~~l~~i~~aGH~~~~E~Pe~~~~~I~~FL~~ 356 (360)
T PLN02679 288 -IPRISLPILVLWGDQDPFTPLDGPVGKYFSSLPSQLPN-VTLYVLEGVGHCPHDDRPDLVHEKLLPWLAQ 356 (360)
T ss_pred -hhhcCCCEEEEEeCCCCCcCchhhHHHHHHhhhccCCc-eEEEEcCCCCCCccccCHHHHHHHHHHHHHh
Confidence 13678999999999999998763 2346667887 7999999999999999999999999999986
No 9
>PLN02965 Probable pheophorbidase
Probab=100.00 E-value=7.8e-32 Score=229.91 Aligned_cols=239 Identities=16% Similarity=0.198 Sum_probs=151.3
Q ss_pred eEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEEEEec
Q 022534 37 TIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQG 116 (295)
Q Consensus 37 ~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G 116 (295)
+|||+||++.++..|+.+++.|++.+|+|+++|+||||.|+.+.. ..|+.+++++|+.+++++++..++++|+ |
T Consensus 5 ~vvllHG~~~~~~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~----~~~~~~~~a~dl~~~l~~l~~~~~~~lv--G 78 (255)
T PLN02965 5 HFVFVHGASHGAWCWYKLATLLDAAGFKSTCVDLTGAGISLTDSN----TVSSSDQYNRPLFALLSDLPPDHKVILV--G 78 (255)
T ss_pred EEEEECCCCCCcCcHHHHHHHHhhCCceEEEecCCcCCCCCCCcc----ccCCHHHHHHHHHHHHHhcCCCCCEEEE--e
Confidence 699999999999999999999966689999999999999986532 2457899999999999999875457777 7
Q ss_pred ccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCc-hhhhh-hh-cccchhhhhhhHHHHHHHHHhCCCcccc--cccc
Q 022534 117 FLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLP-GLFQQ-LR-IPLLGEFTAQNAIMAERFIEAGSPYVLK--LDKA 190 (295)
Q Consensus 117 ~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~-~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 190 (295)
||+| .++..+|.++|++|+++|++++......... ..... .. ........ .......... ....
T Consensus 79 hSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~ 148 (255)
T PLN02965 79 HSIGGGSVTEALCKFTDKISMAIYVAAAMVKPGSIISPRLKNVMEGTEKIWDYT----------FGEGPDKPPTGIMMKP 148 (255)
T ss_pred cCcchHHHHHHHHhCchheeEEEEEccccCCCCCCccHHHHhhhhccccceeee----------eccCCCCCcchhhcCH
Confidence 7776 4688899999999999999876422111000 00000 00 00000000 0000000000 0000
Q ss_pred ccccccccccCCc-hhHHHHH-HHhcchhhh--hHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEE
Q 022534 191 DVYRLPYLASSGP-GFALLEA-ARKVNFKDI--SSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQ 266 (295)
Q Consensus 191 ~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~ 266 (295)
......+...... ....... ......... ...+. ....++++|+++|+|++|.+++++..+.+++.+++ ++++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~~-a~~~ 225 (255)
T PLN02965 149 EFVRHYYYNQSPLEDYTLSSKLLRPAPVRAFQDLDKLP--PNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENWPP-AQTY 225 (255)
T ss_pred HHHHHHHhcCCCHHHHHHHHHhcCCCCCcchhhhhhcc--chhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhCCc-ceEE
Confidence 0000000000000 0000000 000000000 00000 01225799999999999999999999999999997 6999
Q ss_pred EecCCCCCCCCCChHHHHHHHHHHHHhc
Q 022534 267 MIEGAGHMPQEDWPEKVVDGLRYFFLNY 294 (295)
Q Consensus 267 ~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (295)
++++|||++++|+|++|++.|.+|++.+
T Consensus 226 ~i~~~GH~~~~e~p~~v~~~l~~~~~~~ 253 (255)
T PLN02965 226 VLEDSDHSAFFSVPTTLFQYLLQAVSSL 253 (255)
T ss_pred EecCCCCchhhcCHHHHHHHHHHHHHHh
Confidence 9999999999999999999999998764
No 10
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.97 E-value=3e-30 Score=222.92 Aligned_cols=263 Identities=20% Similarity=0.332 Sum_probs=159.2
Q ss_pred ccceeeEEeC-----cEEEEEEEcCCCCCCCceEEEEcCCCCCCccchh---hHHHhhhCCCeEEEeCCCCCCCCCCCCC
Q 022534 10 REYGSYIKSG-----EYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRN---VMSQMSDAGFHCFAPDWLGFGFSDKPEK 81 (295)
Q Consensus 10 ~~~~~~~~~~-----~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~---~~~~l~~~~~~via~Dl~G~G~S~~~~~ 81 (295)
+-.|.|+.++ +++++|...|++ |+|||+||++++...|.. .+..|.+.+|+|+++|+||||+|+.+..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~y~~~g~~----~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~ 79 (282)
T TIGR03343 4 SSTSKFVKINEKGLSNFRIHYNEAGNG----EAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVM 79 (282)
T ss_pred CCcceEEEcccccccceeEEEEecCCC----CeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcC
Confidence 4566777776 688999987743 589999999988888864 3556655689999999999999986532
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCC-chhhhhhhc
Q 022534 82 GYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPL-PGLFQQLRI 159 (295)
Q Consensus 82 ~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~-~~~~~~~~~ 159 (295)
.. ..+ ..+++++.++++.++.++ ++++ |||+| .+++.+|.++|++|+++++++++....... +......+
T Consensus 80 ~~---~~~-~~~~~~l~~~l~~l~~~~-~~lv--G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~- 151 (282)
T TIGR03343 80 DE---QRG-LVNARAVKGLMDALDIEK-AHLV--GNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIK- 151 (282)
T ss_pred cc---ccc-chhHHHHHHHHHHcCCCC-eeEE--EECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHH-
Confidence 11 112 256899999999999886 5565 77765 578899999999999999986542211000 00000000
Q ss_pred ccchhhhhhhHHHHHHHHHhC--CCccccccccccccccccccCCchh--HHHHHHHhcchh--hhhHhhhcCcCCCCCC
Q 022534 160 PLLGEFTAQNAIMAERFIEAG--SPYVLKLDKADVYRLPYLASSGPGF--ALLEAARKVNFK--DISSRIGAGFSSGSWD 233 (295)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 233 (295)
.....+..........+.... .+........... ... ....+.. .+.......... +.... ..+++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~------l~~i~ 223 (282)
T TIGR03343 152 LLFKLYAEPSYETLKQMLNVFLFDQSLITEELLQGR-WEN-IQRQPEHLKNFLISSQKAPLSTWDVTAR------LGEIK 223 (282)
T ss_pred HHHHHhcCCCHHHHHHHHhhCccCcccCcHHHHHhH-HHH-hhcCHHHHHHHHHhccccccccchHHHH------HhhCC
Confidence 000000000000001111000 0000000000000 000 0000000 000000000000 00011 13679
Q ss_pred CcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 234 KPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 234 ~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
+|+|+|+|++|+++++..++++++.+++ +++++++++||++++|+|++|++.|.+|+.+
T Consensus 224 ~Pvlli~G~~D~~v~~~~~~~~~~~~~~-~~~~~i~~agH~~~~e~p~~~~~~i~~fl~~ 282 (282)
T TIGR03343 224 AKTLVTWGRDDRFVPLDHGLKLLWNMPD-AQLHVFSRCGHWAQWEHADAFNRLVIDFLRN 282 (282)
T ss_pred CCEEEEEccCCCcCCchhHHHHHHhCCC-CEEEEeCCCCcCCcccCHHHHHHHHHHHhhC
Confidence 9999999999999999999999999997 7999999999999999999999999999863
No 11
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.97 E-value=3.8e-30 Score=221.35 Aligned_cols=263 Identities=22% Similarity=0.358 Sum_probs=169.3
Q ss_pred cccceeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCC
Q 022534 9 GREYGSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDF 88 (295)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~ 88 (295)
-|+-+++++.++++++|++.|+.+ .|+|||+||+++++..|..+++.|++ +|+|+++|+||||.|+.+.. ..|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~g~~~--~~~vv~~hG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~----~~~ 76 (278)
T TIGR03056 4 HRDCSRRVTVGPFHWHVQDMGPTA--GPLLLLLHGTGASTHSWRDLMPPLAR-SFRVVAPDLPGHGFTRAPFR----FRF 76 (278)
T ss_pred CCCccceeeECCEEEEEEecCCCC--CCeEEEEcCCCCCHHHHHHHHHHHhh-CcEEEeecCCCCCCCCCccc----cCC
Confidence 367789999999999999988643 36999999999999999999999986 79999999999999987543 246
Q ss_pred CHHHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCch-hhh---hh--hccc
Q 022534 89 TENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPG-LFQ---QL--RIPL 161 (295)
Q Consensus 89 ~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~-~~~---~~--~~~~ 161 (295)
+++++++++.++++++++++ ++++ |||+| .+++.+|.++|++++++++++++......... ... .. ..+.
T Consensus 77 ~~~~~~~~l~~~i~~~~~~~-~~lv--G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (278)
T TIGR03056 77 TLPSMAEDLSALCAAEGLSP-DGVI--GHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTLFPYMARVLACNPF 153 (278)
T ss_pred CHHHHHHHHHHHHHHcCCCC-ceEE--EECccHHHHHHHHHhCCcccceEEEEcCcccccccccccccchhhHhhhhccc
Confidence 88999999999999998764 5666 67765 56788899999999999988654332111000 000 00 0000
Q ss_pred chhhhhh---hHHHHHHHHHhCCCccccccccccccccccccCCch--hHHHHHHHhcchhhhhHhhhcCcCCCCCCCcE
Q 022534 162 LGEFTAQ---NAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPG--FALLEAARKVNFKDISSRIGAGFSSGSWDKPV 236 (295)
Q Consensus 162 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 236 (295)
....... .......+... ....+.......+.. ...... ............... .. ..+++++|+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~----~~--~~~~i~~P~ 223 (278)
T TIGR03056 154 TPPMMSRGAADQQRVERLIRD-TGSLLDKAGMTYYGR---LIRSPAHVDGALSMMAQWDLAPL----NR--DLPRITIPL 223 (278)
T ss_pred chHHHHhhcccCcchhHHhhc-cccccccchhhHHHH---hhcCchhhhHHHHHhhcccccch----hh--hcccCCCCE
Confidence 0000000 00000000000 000000000000000 000000 000000000000000 00 123678999
Q ss_pred EEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHH
Q 022534 237 LVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFL 292 (295)
Q Consensus 237 l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 292 (295)
++|+|++|.+++.+..+++.+.+++ +++++++++||++++|+|+++++.|.+|++
T Consensus 224 lii~g~~D~~vp~~~~~~~~~~~~~-~~~~~~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 224 HLIAGEEDKAVPPDESKRAATRVPT-ATLHVVPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred EEEEeCCCcccCHHHHHHHHHhccC-CeEEEECCCCCcccccCHHHHHHHHHHHhC
Confidence 9999999999999888999888887 799999999999999999999999999984
No 12
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.97 E-value=5.7e-30 Score=233.07 Aligned_cols=265 Identities=20% Similarity=0.298 Sum_probs=165.5
Q ss_pred eeEEeCcEEEEEEEcCCCC-CCCceEEEEcCCCCCCccchh-hHHHhhh---CCCeEEEeCCCCCCCCCCCCCCCCCCCC
Q 022534 14 SYIKSGEYRWFVRETGSAD-SRLGTIVFLHGAPSHSYSYRN-VMSQMSD---AGFHCFAPDWLGFGFSDKPEKGYDDFDF 88 (295)
Q Consensus 14 ~~~~~~~~~~~~~~~g~~~-~~~~~vv~lHG~~~~~~~w~~-~~~~l~~---~~~~via~Dl~G~G~S~~~~~~~~~~~~ 88 (295)
.+++.++..+||...|+++ +.+|+|||+||++++...|.. +++.|++ .+|+|+++|+||||+|+++.. ..|
T Consensus 179 ~~~~~~~~~l~~~~~gp~~~~~k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~----~~y 254 (481)
T PLN03087 179 SWLSSSNESLFVHVQQPKDNKAKEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPAD----SLY 254 (481)
T ss_pred eeEeeCCeEEEEEEecCCCCCCCCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCC----CcC
Confidence 5677888999999988755 335799999999999999985 4566652 589999999999999987632 246
Q ss_pred CHHHHHHHHH-HHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhh-hh----ccc
Q 022534 89 TENEFHEELD-KLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQ-LR----IPL 161 (295)
Q Consensus 89 ~~~~~~~~l~-~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~-~~----~~~ 161 (295)
+.+++++++. .++++++.++ ++++ |||+| .+++.+|.++|++|++++++++|............. .+ ...
T Consensus 255 tl~~~a~~l~~~ll~~lg~~k-~~LV--GhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (481)
T PLN03087 255 TLREHLEMIERSVLERYKVKS-FHIV--AHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKGVQATQYVMRKVAPRRV 331 (481)
T ss_pred CHHHHHHHHHHHHHHHcCCCC-EEEE--EECHHHHHHHHHHHhChHhccEEEEECCCccccccchhHHHHHHHHhccccc
Confidence 8899999994 8999998875 6676 77776 468889999999999999997665432111100000 00 000
Q ss_pred chhhhhhhHHHHHHHHHhCCCcc---c--cccccc----ccccc----cc-----c-cCCchh-HHHHHHHhcc--hhhh
Q 022534 162 LGEFTAQNAIMAERFIEAGSPYV---L--KLDKAD----VYRLP----YL-----A-SSGPGF-ALLEAARKVN--FKDI 219 (295)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~----~~~~~----~~-----~-~~~~~~-~~~~~~~~~~--~~~~ 219 (295)
...... ......|.+...... . ...... ..... .. . ...... .+........ ..+.
T Consensus 332 ~~~~~~--~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~ 409 (481)
T PLN03087 332 WPPIAF--GASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNIICGSGSKLDGY 409 (481)
T ss_pred CCcccc--chhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHHHhchhhhhhhH
Confidence 000000 000011111000000 0 000000 00000 00 0 000000 0000000000 0011
Q ss_pred hHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCC-CChHHHHHHHHHHHHh
Q 022534 220 SSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQE-DWPEKVVDGLRYFFLN 293 (295)
Q Consensus 220 ~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~ 293 (295)
+..+. .++++|+|+|+|++|+++|++.++.+++.+|+ +++++|++|||++++ |+|++|++.|.+|...
T Consensus 410 l~~l~-----~~I~vPtLII~Ge~D~ivP~~~~~~la~~iP~-a~l~vI~~aGH~~~v~e~p~~fa~~L~~F~~~ 478 (481)
T PLN03087 410 LDHVR-----DQLKCDVAIFHGGDDELIPVECSYAVKAKVPR-ARVKVIDDKDHITIVVGRQKEFARELEEIWRR 478 (481)
T ss_pred HHHHH-----HhCCCCEEEEEECCCCCCCHHHHHHHHHhCCC-CEEEEeCCCCCcchhhcCHHHHHHHHHHHhhc
Confidence 11111 25789999999999999999999999999997 799999999999985 9999999999999864
No 13
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.97 E-value=3.3e-30 Score=219.89 Aligned_cols=242 Identities=20% Similarity=0.264 Sum_probs=147.1
Q ss_pred EEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 022534 23 WFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLD 102 (295)
Q Consensus 23 ~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~ 102 (295)
++|.+.|.++ |+||||||+++++..|..+++.|.+ +|+|+++|+||||.|+.+. .++++++++++.+
T Consensus 4 ~~y~~~G~g~---~~ivllHG~~~~~~~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~------~~~~~~~~~~l~~--- 70 (256)
T PRK10349 4 IWWQTKGQGN---VHLVLLHGWGLNAEVWRCIDEELSS-HFTLHLVDLPGFGRSRGFG------ALSLADMAEAVLQ--- 70 (256)
T ss_pred cchhhcCCCC---CeEEEECCCCCChhHHHHHHHHHhc-CCEEEEecCCCCCCCCCCC------CCCHHHHHHHHHh---
Confidence 5677777532 4799999999999999999999986 6999999999999998532 2466777766554
Q ss_pred HhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCC--CCCchhhhhhhcccchhhhhhhHHHHHHHHHh
Q 022534 103 VLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTAS--SPLPGLFQQLRIPLLGEFTAQNAIMAERFIEA 179 (295)
Q Consensus 103 ~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (295)
++.++ +++| |||+| .+++.+|.++|++|+++|+++++.... ...+.........+...+...-......++..
T Consensus 71 -~~~~~-~~lv--GhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (256)
T PRK10349 71 -QAPDK-AIWL--GWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLAL 146 (256)
T ss_pred -cCCCC-eEEE--EECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHHH
Confidence 35554 6777 67766 568888999999999999997642211 11111110000000000000000001111110
Q ss_pred --CCCccccccccccccccccccCCchhHHH----HHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHH
Q 022534 180 --GSPYVLKLDKADVYRLPYLASSGPGFALL----EAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAE 253 (295)
Q Consensus 180 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~ 253 (295)
............ +.........+..... ......+ ....+ +++++|+|+|+|++|.+++.+.++
T Consensus 147 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l------~~i~~P~lii~G~~D~~~~~~~~~ 216 (256)
T PRK10349 147 QTMGTETARQDARA-LKKTVLALPMPEVDVLNGGLEILKTVD---LRQPL------QNVSMPFLRLYGYLDGLVPRKVVP 216 (256)
T ss_pred HHccCchHHHHHHH-HHHHhhccCCCcHHHHHHHHHHHHhCc---cHHHH------hhcCCCeEEEecCCCccCCHHHHH
Confidence 000000000000 0000000000101000 0111111 11111 267999999999999999998889
Q ss_pred HHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHH
Q 022534 254 EFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFL 292 (295)
Q Consensus 254 ~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 292 (295)
.+.+.+++ ++++++|+|||++++|+|++|++.|.+|-.
T Consensus 217 ~~~~~i~~-~~~~~i~~~gH~~~~e~p~~f~~~l~~~~~ 254 (256)
T PRK10349 217 MLDKLWPH-SESYIFAKAAHAPFISHPAEFCHLLVALKQ 254 (256)
T ss_pred HHHHhCCC-CeEEEeCCCCCCccccCHHHHHHHHHHHhc
Confidence 99999987 799999999999999999999999999843
No 14
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.97 E-value=5.1e-30 Score=228.38 Aligned_cols=263 Identities=19% Similarity=0.290 Sum_probs=164.0
Q ss_pred cceeeEEeCcEEEEEEEcCCCC-CCCceEEEEcCCCCCCcc-chhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCC
Q 022534 11 EYGSYIKSGEYRWFVRETGSAD-SRLGTIVFLHGAPSHSYS-YRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDF 88 (295)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~g~~~-~~~~~vv~lHG~~~~~~~-w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~ 88 (295)
+..++++.+|.+++++.+++.+ +++++|||+||+++++.. |..+++.|++.||+|+++|+||||+|+.+.. +.+
T Consensus 62 ~~~~~~~~~g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~----~~~ 137 (349)
T PLN02385 62 EESYEVNSRGVEIFSKSWLPENSRPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHG----YIP 137 (349)
T ss_pred eeeeEEcCCCCEEEEEEEecCCCCCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCC----CcC
Confidence 4456777899999999998643 356899999999988765 6889999987799999999999999997532 234
Q ss_pred CHHHHHHHHHHHHHHhCCC-----CceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCC-Cc-hhhhhhhcc
Q 022534 89 TENEFHEELDKLLDVLEVK-----YPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSP-LP-GLFQQLRIP 160 (295)
Q Consensus 89 ~~~~~~~~l~~~~~~l~~~-----~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~-~~-~~~~~~~~~ 160 (295)
+.+++++|+.++++.+..+ .+++|+ |||+| .+++.+|.++|++|+++|++++....... .+ ........
T Consensus 138 ~~~~~~~dv~~~l~~l~~~~~~~~~~~~Lv--GhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~~~~~~~~- 214 (349)
T PLN02385 138 SFDDLVDDVIEHYSKIKGNPEFRGLPSFLF--GQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPPLVLQILI- 214 (349)
T ss_pred CHHHHHHHHHHHHHHHHhccccCCCCEEEE--EeccchHHHHHHHHhCcchhhheeEecccccccccccCchHHHHHHH-
Confidence 6788999999999887542 256777 67765 57888899999999999999643221110 01 11000000
Q ss_pred cchhhhhhhHHHHHHHHHhC--CCccccc-cccccccc-cccccCCchh-HHHHHHHhcchhhhhHhhhcCcCCCCCCCc
Q 022534 161 LLGEFTAQNAIMAERFIEAG--SPYVLKL-DKADVYRL-PYLASSGPGF-ALLEAARKVNFKDISSRIGAGFSSGSWDKP 235 (295)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 235 (295)
.+..... .. ...... ....... ........ .......... .....+... .+ +... ..++++|
T Consensus 215 ~~~~~~p-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~----~~~~--l~~i~~P 281 (349)
T PLN02385 215 LLANLLP-KA----KLVPQKDLAELAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTT--QE----IEMQ--LEEVSLP 281 (349)
T ss_pred HHHHHCC-Cc----eecCCCccccccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHH--HH----HHHh--cccCCCC
Confidence 0000000 00 000000 0000000 00000000 0000000011 111111100 01 1111 2367999
Q ss_pred EEEEEeCCCCCCCcchHHHHHhcCCC-CeEEEEecCCCCCCCCCChHH----HHHHHHHHHHh
Q 022534 236 VLVAWGISDKYLPQSVAEEFQKGNPN-VVKLQMIEGAGHMPQEDWPEK----VVDGLRYFFLN 293 (295)
Q Consensus 236 ~l~i~G~~D~~~~~~~~~~~~~~~~~-~~~~~~i~~~gH~~~~e~p~~----~~~~i~~fl~~ 293 (295)
+|+|+|++|.+++++.++.+++.++. +++++++|++||++++|+|++ +++.|.+||.+
T Consensus 282 ~Lii~G~~D~vv~~~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~ 344 (349)
T PLN02385 282 LLILHGEADKVTDPSVSKFLYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDS 344 (349)
T ss_pred EEEEEeCCCCccChHHHHHHHHHcCCCCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHH
Confidence 99999999999999999999887632 479999999999999999987 88899999976
No 15
>PRK06489 hypothetical protein; Provisional
Probab=99.97 E-value=1.1e-29 Score=227.21 Aligned_cols=266 Identities=19% Similarity=0.227 Sum_probs=155.6
Q ss_pred eCcEEEEEEEcCCCCC-----CCceEEEEcCCCCCCccch--hhHHHh-------hhCCCeEEEeCCCCCCCCCCCCCCC
Q 022534 18 SGEYRWFVRETGSADS-----RLGTIVFLHGAPSHSYSYR--NVMSQM-------SDAGFHCFAPDWLGFGFSDKPEKGY 83 (295)
Q Consensus 18 ~~~~~~~~~~~g~~~~-----~~~~vv~lHG~~~~~~~w~--~~~~~l-------~~~~~~via~Dl~G~G~S~~~~~~~ 83 (295)
.+|.+++|++.|+++. ..|+|||+||+++++..|. .+.+.| ...+|+||++|+||||+|+.+....
T Consensus 47 ~~g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~~ 126 (360)
T PRK06489 47 LPELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDGL 126 (360)
T ss_pred cCCceEEEEecCCCCcccccCCCCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcCC
Confidence 4689999999986420 0368999999999988886 444444 1247999999999999999754221
Q ss_pred --CCCCCCHHHHHHHHHHH-HHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhh---
Q 022534 84 --DDFDFTENEFHEELDKL-LDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQ--- 156 (295)
Q Consensus 84 --~~~~~~~~~~~~~l~~~-~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~--- 156 (295)
....|+++++++++.++ ++++++++.++++ |||+| .+++.+|.++|++|+++|++++..............
T Consensus 127 ~~~~~~~~~~~~a~~~~~~l~~~lgi~~~~~lv--G~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~~~~~~~~~~~~~~~ 204 (360)
T PRK06489 127 RAAFPRYDYDDMVEAQYRLVTEGLGVKHLRLIL--GTSMGGMHAWMWGEKYPDFMDALMPMASQPTEMSGRNWMWRRMLI 204 (360)
T ss_pred CCCCCcccHHHHHHHHHHHHHHhcCCCceeEEE--EECHHHHHHHHHHHhCchhhheeeeeccCcccccHHHHHHHHHHH
Confidence 01146889999988885 4889988644455 77776 578899999999999999987532211110000000
Q ss_pred --hhc-c-cc-hhhhhhhHHHH--H---HHHHhC------CCccccccccccccccccc--cCCchhHHHHHHHhcchhh
Q 022534 157 --LRI-P-LL-GEFTAQNAIMA--E---RFIEAG------SPYVLKLDKADVYRLPYLA--SSGPGFALLEAARKVNFKD 218 (295)
Q Consensus 157 --~~~-~-~~-~~~~~~~~~~~--~---~~~~~~------~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 218 (295)
... + +. ..+........ . .+.... .............+..... ...+. .+..........+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d 283 (360)
T PRK06489 205 ESIRNDPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADKLVDERLAAPVTADAN-DFLYQWDSSRDYN 283 (360)
T ss_pred HHHHhCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHHhhhhcCHH-HHHHHHHHhhccC
Confidence 000 0 00 00000000000 0 000000 0000000000000000000 00000 0000000000001
Q ss_pred hhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchH--HHHHhcCCCCeEEEEecCC----CCCCCCCChHHHHHHHHHHHH
Q 022534 219 ISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVA--EEFQKGNPNVVKLQMIEGA----GHMPQEDWPEKVVDGLRYFFL 292 (295)
Q Consensus 219 ~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~--~~~~~~~~~~~~~~~i~~~----gH~~~~e~p~~~~~~i~~fl~ 292 (295)
.... ..++++|+|+|+|++|.+++++.+ +++++.+|+ .++++||+| ||+++ |+|++|++.|.+||.
T Consensus 284 ~~~~------L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip~-a~l~~i~~a~~~~GH~~~-e~P~~~~~~i~~FL~ 355 (360)
T PRK06489 284 PSPD------LEKIKAPVLAINSADDERNPPETGVMEAALKRVKH-GRLVLIPASPETRGHGTT-GSAKFWKAYLAEFLA 355 (360)
T ss_pred hHHH------HHhCCCCEEEEecCCCcccChhhHHHHHHHHhCcC-CeEEEECCCCCCCCcccc-cCHHHHHHHHHHHHH
Confidence 1111 136799999999999999988865 788999997 699999996 99998 899999999999997
Q ss_pred hc
Q 022534 293 NY 294 (295)
Q Consensus 293 ~~ 294 (295)
..
T Consensus 356 ~~ 357 (360)
T PRK06489 356 QV 357 (360)
T ss_pred hc
Confidence 63
No 16
>PLN02578 hydrolase
Probab=99.97 E-value=2.4e-29 Score=224.39 Aligned_cols=261 Identities=20% Similarity=0.306 Sum_probs=162.6
Q ss_pred eeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHH
Q 022534 13 GSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENE 92 (295)
Q Consensus 13 ~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~ 92 (295)
..+++.+|..++|.+.|++ ++|||+||+++++..|..+++.|++ +|+|+++|+||||.|+++.. .|+.+.
T Consensus 68 ~~~~~~~~~~i~Y~~~g~g----~~vvliHG~~~~~~~w~~~~~~l~~-~~~v~~~D~~G~G~S~~~~~-----~~~~~~ 137 (354)
T PLN02578 68 YNFWTWRGHKIHYVVQGEG----LPIVLIHGFGASAFHWRYNIPELAK-KYKVYALDLLGFGWSDKALI-----EYDAMV 137 (354)
T ss_pred ceEEEECCEEEEEEEcCCC----CeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCccc-----ccCHHH
Confidence 3566778999999988743 5899999999999999999999985 79999999999999997642 457888
Q ss_pred HHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCC---chhh---hhh-hcccchh
Q 022534 93 FHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPL---PGLF---QQL-RIPLLGE 164 (295)
Q Consensus 93 ~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~---~~~~---~~~-~~~~~~~ 164 (295)
+++++.++++.+..+ +++++ |||+| .+++.+|.++|++|+++++++++....... .... ... ...+...
T Consensus 138 ~a~~l~~~i~~~~~~-~~~lv--G~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (354)
T PLN02578 138 WRDQVADFVKEVVKE-PAVLV--GNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKP 214 (354)
T ss_pred HHHHHHHHHHHhccC-CeEEE--EECHHHHHHHHHHHhChHhcceEEEECCCccccccccccccccccccchhhHHHhHH
Confidence 999999999998765 46676 66665 578889999999999999987543211100 0000 000 0000000
Q ss_pred hhhhhHHHHHHHH--HhCCCc--------cc-cccc-cc-cccccccccCCch--hHHHHHHHhcc---hhhhhHhhhcC
Q 022534 165 FTAQNAIMAERFI--EAGSPY--------VL-KLDK-AD-VYRLPYLASSGPG--FALLEAARKVN---FKDISSRIGAG 226 (295)
Q Consensus 165 ~~~~~~~~~~~~~--~~~~~~--------~~-~~~~-~~-~~~~~~~~~~~~~--~~~~~~~~~~~---~~~~~~~~~~~ 226 (295)
...........+. ....+. .. .... .+ ..........+++ ..++....... ........
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 291 (354)
T PLN02578 215 LKEWFQRVVLGFLFWQAKQPSRIESVLKSVYKDKSNVDDYLVESITEPAADPNAGEVYYRLMSRFLFNQSRYTLDSL--- 291 (354)
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCcccCCHHHHHHHHhcccCCchHHHHHHHHHHHhcCCCCCCHHHH---
Confidence 0000000000000 000000 00 0000 00 0000000000111 11111111000 00000000
Q ss_pred cCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 227 FSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 227 ~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
.+++++|+++|+|++|++++.+.++++++.+++ ++++++ ++||++++|+|++|++.|.+|+..
T Consensus 292 --l~~i~~PvLiI~G~~D~~v~~~~~~~l~~~~p~-a~l~~i-~~GH~~~~e~p~~~~~~I~~fl~~ 354 (354)
T PLN02578 292 --LSKLSCPLLLLWGDLDPWVGPAKAEKIKAFYPD-TTLVNL-QAGHCPHDEVPEQVNKALLEWLSS 354 (354)
T ss_pred --hhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCC-CEEEEe-CCCCCccccCHHHHHHHHHHHHhC
Confidence 136799999999999999999999999999987 699999 699999999999999999999863
No 17
>PHA02857 monoglyceride lipase; Provisional
Probab=99.97 E-value=8e-29 Score=213.64 Aligned_cols=256 Identities=17% Similarity=0.248 Sum_probs=157.8
Q ss_pred eeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHH
Q 022534 13 GSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENE 92 (295)
Q Consensus 13 ~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~ 92 (295)
+.|+..+|.+++|+.+-+++++++.|+++||+++++..|..+++.|++.||+|+++|+||||.|++..... .+..+
T Consensus 3 ~~~~~~~g~~l~~~~~~~~~~~~~~v~llHG~~~~~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~~~----~~~~~ 78 (276)
T PHA02857 3 NCMFNLDNDYIYCKYWKPITYPKALVFISHGAGEHSGRYEELAENISSLGILVFSHDHIGHGRSNGEKMMI----DDFGV 78 (276)
T ss_pred ceeecCCCCEEEEEeccCCCCCCEEEEEeCCCccccchHHHHHHHHHhCCCEEEEccCCCCCCCCCccCCc----CCHHH
Confidence 46788899999999886644556778888999999999999999998779999999999999998632111 13344
Q ss_pred HHHHHHHHHHHhC---CCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhh
Q 022534 93 FHEELDKLLDVLE---VKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQ 168 (295)
Q Consensus 93 ~~~~l~~~~~~l~---~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (295)
+.+|+.+.++.+. -.++++++ |||+| .+++.+|.++|++++++|+++++... ...+ ........
T Consensus 79 ~~~d~~~~l~~~~~~~~~~~~~lv--G~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~-~~~~-~~~~~~~~-------- 146 (276)
T PHA02857 79 YVRDVVQHVVTIKSTYPGVPVFLL--GHSMGATISILAAYKNPNLFTAMILMSPLVNA-EAVP-RLNLLAAK-------- 146 (276)
T ss_pred HHHHHHHHHHHHHhhCCCCCEEEE--EcCchHHHHHHHHHhCccccceEEEecccccc-cccc-HHHHHHHH--------
Confidence 5555555555431 12357777 67766 46788888999999999998653321 1111 00000000
Q ss_pred hHHHHHHHHHhC-----CCcccccccccc--c-cccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEE
Q 022534 169 NAIMAERFIEAG-----SPYVLKLDKADV--Y-RLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAW 240 (295)
Q Consensus 169 ~~~~~~~~~~~~-----~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~ 240 (295)
....+.... .+.......... + ..++.........+...+.. ....+... .+++++|+|+|+
T Consensus 147 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~--l~~i~~Pvliv~ 216 (276)
T PHA02857 147 ---LMGIFYPNKIVGKLCPESVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLK-----ATNKVRKI--IPKIKTPILILQ 216 (276)
T ss_pred ---HHHHhCCCCccCCCCHhhccCCHHHHHHHhcCCCccCCCccHHHHHHHHH-----HHHHHHHh--cccCCCCEEEEe
Confidence 000000000 000000000000 0 00000000011111111110 00111111 236799999999
Q ss_pred eCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCCh---HHHHHHHHHHHHhc
Q 022534 241 GISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWP---EKVVDGLRYFFLNY 294 (295)
Q Consensus 241 G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p---~~~~~~i~~fl~~~ 294 (295)
|++|.++|++.+.++.+.++.++++++++++||.++.|++ +++.+.|.+||...
T Consensus 217 G~~D~i~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 217 GTNNEISDVSGAYYFMQHANCNREIKIYEGAKHHLHKETDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred cCCCCcCChHHHHHHHHHccCCceEEEeCCCcccccCCchhHHHHHHHHHHHHHHHh
Confidence 9999999999999998876434799999999999999876 58999999999864
No 18
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.97 E-value=3.3e-29 Score=212.37 Aligned_cols=247 Identities=22% Similarity=0.324 Sum_probs=156.9
Q ss_pred EEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 022534 23 WFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLD 102 (295)
Q Consensus 23 ~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~ 102 (295)
++|...|++.+.+|+|||+||+++++..|..+++.|.+ +|+|+++|+||||.|+.+.. ..|+.+++++++.++++
T Consensus 1 ~~~~~~~~~~~~~~~iv~lhG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~----~~~~~~~~~~~~~~~i~ 75 (257)
T TIGR03611 1 MHYELHGPPDADAPVVVLSSGLGGSGSYWAPQLDVLTQ-RFHVVTYDHRGTGRSPGELP----PGYSIAHMADDVLQLLD 75 (257)
T ss_pred CEEEEecCCCCCCCEEEEEcCCCcchhHHHHHHHHHHh-ccEEEEEcCCCCCCCCCCCc----ccCCHHHHHHHHHHHHH
Confidence 36677776544568999999999999999999999975 79999999999999986432 24688999999999999
Q ss_pred HhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchh-hhhhhcccchhhhhhhHHH--------
Q 022534 103 VLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGL-FQQLRIPLLGEFTAQNAIM-------- 172 (295)
Q Consensus 103 ~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-------- 172 (295)
.++.++ ++++ |||+| .++..+|.++|++|+++|++++.... ...... +.. ...++... ......
T Consensus 76 ~~~~~~-~~l~--G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~-~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~ 149 (257)
T TIGR03611 76 ALNIER-FHFV--GHALGGLIGLQLALRYPERLLSLVLINAWSRP-DPHTRRCFDV-RIALLQHA-GPEAYVHAQALFLY 149 (257)
T ss_pred HhCCCc-EEEE--EechhHHHHHHHHHHChHHhHHheeecCCCCC-ChhHHHHHHH-HHHHHhcc-Ccchhhhhhhhhhc
Confidence 998775 6666 67765 56888889999999999988643221 110000 000 00000000 000000
Q ss_pred HHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchH
Q 022534 173 AERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVA 252 (295)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~ 252 (295)
...|+....+.. ........ ...... ..+..........+.... ..++++|+++++|++|.+++++.+
T Consensus 150 ~~~~~~~~~~~~---~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~------~~~i~~P~l~i~g~~D~~~~~~~~ 217 (257)
T TIGR03611 150 PADWISENAARL---AADEAHAL--AHFPGK-ANVLRRINALEAFDVSAR------LDRIQHPVLLIANRDDMLVPYTQS 217 (257)
T ss_pred cccHhhccchhh---hhhhhhcc--cccCcc-HHHHHHHHHHHcCCcHHH------hcccCccEEEEecCcCcccCHHHH
Confidence 000000000000 00000000 000000 001111000000011111 136789999999999999999999
Q ss_pred HHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 253 EEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 253 ~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
+++++.+++ +++++++++||++++|+|+++++.|.+||++
T Consensus 218 ~~~~~~~~~-~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 257 (257)
T TIGR03611 218 LRLAAALPN-AQLKLLPYGGHASNVTDPETFNRALLDFLKT 257 (257)
T ss_pred HHHHHhcCC-ceEEEECCCCCCccccCHHHHHHHHHHHhcC
Confidence 999998887 6999999999999999999999999999974
No 19
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.97 E-value=9.4e-29 Score=210.45 Aligned_cols=247 Identities=15% Similarity=0.233 Sum_probs=155.1
Q ss_pred EEEEEEcC-CCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q 022534 22 RWFVRETG-SADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKL 100 (295)
Q Consensus 22 ~~~~~~~g-~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~ 100 (295)
+++|+..+ .++..+|+|||+||++++...|..+++.|++ +|+|+++|+||||.|+.+. .++.+++++|+.++
T Consensus 2 ~~~~~~~~~~~~~~~~~iv~lhG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~s~~~~------~~~~~~~~~d~~~~ 74 (255)
T PRK10673 2 KLNIRAQTAQNPHNNSPIVLVHGLFGSLDNLGVLARDLVN-DHDIIQVDMRNHGLSPRDP------VMNYPAMAQDLLDT 74 (255)
T ss_pred cceeeeccCCCCCCCCCEEEECCCCCchhHHHHHHHHHhh-CCeEEEECCCCCCCCCCCC------CCCHHHHHHHHHHH
Confidence 34555543 2333468999999999999999999999986 7999999999999998642 25778999999999
Q ss_pred HHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCC-CCCCCC-chhhhhhhcccchhhhhhhHHHHHHHH
Q 022534 101 LDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPL-TASSPL-PGLFQQLRIPLLGEFTAQNAIMAERFI 177 (295)
Q Consensus 101 ~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (295)
+++++.++ ++++ |||+| .+++.+|.++|++|+++++++++. ...... ...+.............. .... ...
T Consensus 75 l~~l~~~~-~~lv--GhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~ 149 (255)
T PRK10673 75 LDALQIEK-ATFI--GHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSEAGATTR-QQAA-AIM 149 (255)
T ss_pred HHHcCCCc-eEEE--EECHHHHHHHHHHHhCHhhcceEEEEecCCCCccchhhHHHHHHHHHhhhcccccH-HHHH-HHH
Confidence 99998875 6666 67776 467888899999999999986432 211100 000100000000000000 0000 000
Q ss_pred HhCCCccccccccccccccccccC-Cchh-HHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHH
Q 022534 178 EAGSPYVLKLDKADVYRLPYLASS-GPGF-ALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEF 255 (295)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~ 255 (295)
..... ...........+.... .... ...... ..+...-..+.+++|+|+|+|++|+.++.+..+.+
T Consensus 150 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~ 217 (255)
T PRK10673 150 RQHLN---EEGVIQFLLKSFVDGEWRFNVPVLWDQY---------PHIVGWEKIPAWPHPALFIRGGNSPYVTEAYRDDL 217 (255)
T ss_pred HHhcC---CHHHHHHHHhcCCcceeEeeHHHHHHhH---------HHHhCCcccCCCCCCeEEEECCCCCCCCHHHHHHH
Confidence 00000 0000000000000000 0000 000000 01100001236789999999999999999999999
Q ss_pred HhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 256 QKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 256 ~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
++.+++ +++.+++++||++++|+|+++++.|++||.+
T Consensus 218 ~~~~~~-~~~~~~~~~gH~~~~~~p~~~~~~l~~fl~~ 254 (255)
T PRK10673 218 LAQFPQ-ARAHVIAGAGHWVHAEKPDAVLRAIRRYLND 254 (255)
T ss_pred HHhCCC-cEEEEeCCCCCeeeccCHHHHHHHHHHHHhc
Confidence 999987 7999999999999999999999999999974
No 20
>PRK10749 lysophospholipase L2; Provisional
Probab=99.97 E-value=2.3e-28 Score=216.12 Aligned_cols=275 Identities=14% Similarity=0.159 Sum_probs=165.6
Q ss_pred cccceeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCC-CCCCC
Q 022534 9 GREYGSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKG-YDDFD 87 (295)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~-~~~~~ 87 (295)
.++.++|+..+|++++|.++++++ ++++||++||++++...|..++..|++.||+|+++|+||||.|+++... .....
T Consensus 29 ~~~~~~~~~~~g~~l~~~~~~~~~-~~~~vll~HG~~~~~~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~ 107 (330)
T PRK10749 29 QREEAEFTGVDDIPIRFVRFRAPH-HDRVVVICPGRIESYVKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHV 107 (330)
T ss_pred hccceEEEcCCCCEEEEEEccCCC-CCcEEEEECCccchHHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCcc
Confidence 456788899999999999988643 3579999999999999999999888878999999999999999864321 11223
Q ss_pred CCHHHHHHHHHHHHHHh----CCCCceEEEEecccchH-HHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccc
Q 022534 88 FTENEFHEELDKLLDVL----EVKYPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLL 162 (295)
Q Consensus 88 ~~~~~~~~~l~~~~~~l----~~~~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~ 162 (295)
++.+++++|+.++++.+ +.. +++++ |||+|+ +++.+|.++|++|+++|+++++.......+...........
T Consensus 108 ~~~~~~~~d~~~~~~~~~~~~~~~-~~~l~--GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~ 184 (330)
T PRK10749 108 ERFNDYVDDLAAFWQQEIQPGPYR-KRYAL--AHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPLPSWMARRILNWA 184 (330)
T ss_pred ccHHHHHHHHHHHHHHHHhcCCCC-CeEEE--EEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCCCcHHHHHHHHHH
Confidence 47789999999999876 333 57777 777764 67788899999999999885433221111111000000000
Q ss_pred hhhh-hhh--HHHHHHHHHh-CCCccccccccc--cccccccccC-----CchhHHHHHHHhcchhhhhHhhhcCcCCCC
Q 022534 163 GEFT-AQN--AIMAERFIEA-GSPYVLKLDKAD--VYRLPYLASS-----GPGFALLEAARKVNFKDISSRIGAGFSSGS 231 (295)
Q Consensus 163 ~~~~-~~~--~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (295)
.... ... .....++... .....+...... .....+.... .....+..... . ....+.. ...+
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~--~~~~ 257 (330)
T PRK10749 185 EGHPRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESI----L-AGEQVLA--GAGD 257 (330)
T ss_pred HHhcCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHH----H-HHHHHHh--hccC
Confidence 0000 000 0000000000 000000000000 0000000000 00000000000 0 0001111 1236
Q ss_pred CCCcEEEEEeCCCCCCCcchHHHHHhcCC------CCeEEEEecCCCCCCCCCCh---HHHHHHHHHHHHhc
Q 022534 232 WDKPVLVAWGISDKYLPQSVAEEFQKGNP------NVVKLQMIEGAGHMPQEDWP---EKVVDGLRYFFLNY 294 (295)
Q Consensus 232 ~~~P~l~i~G~~D~~~~~~~~~~~~~~~~------~~~~~~~i~~~gH~~~~e~p---~~~~~~i~~fl~~~ 294 (295)
+++|+|+|+|++|.+++++.+..+++.++ .+++++++|+|||+++.|.+ +.+.+.|.+||++.
T Consensus 258 i~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 258 ITTPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNRH 329 (330)
T ss_pred CCCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhhc
Confidence 78999999999999999988888876542 23589999999999999876 67889999999864
No 21
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.96 E-value=1.6e-28 Score=207.90 Aligned_cols=272 Identities=20% Similarity=0.259 Sum_probs=165.5
Q ss_pred ccccceeeEEeC--cEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCC
Q 022534 8 KGREYGSYIKSG--EYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDD 85 (295)
Q Consensus 8 ~~~~~~~~~~~~--~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~ 85 (295)
.-++...++... ...++.. ..+....++|+|||||++++...|-...+.|+. .+.|+++|+||+|+|++|.-.. +
T Consensus 62 ~v~~~~~~v~i~~~~~iw~~~-~~~~~~~~~plVliHGyGAg~g~f~~Nf~~La~-~~~vyaiDllG~G~SSRP~F~~-d 138 (365)
T KOG4409|consen 62 PVPYSKKYVRIPNGIEIWTIT-VSNESANKTPLVLIHGYGAGLGLFFRNFDDLAK-IRNVYAIDLLGFGRSSRPKFSI-D 138 (365)
T ss_pred CCCcceeeeecCCCceeEEEe-ecccccCCCcEEEEeccchhHHHHHHhhhhhhh-cCceEEecccCCCCCCCCCCCC-C
Confidence 344555666653 3444433 333334578999999999999999999999997 7999999999999999986433 2
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCceEEEEecccchH-HHHHHHHhCcCccceeEEEcCCCCCCC-C-Cc-------hhhh
Q 022534 86 FDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNSPLTASS-P-LP-------GLFQ 155 (295)
Q Consensus 86 ~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~p~~~~~-~-~~-------~~~~ 155 (295)
..-..+.+++.|+++..+.|+++ .+|+ |||.|+ ++..||++||++|++|||++ |+.... + .. ..+.
T Consensus 139 ~~~~e~~fvesiE~WR~~~~L~K-milv--GHSfGGYLaa~YAlKyPerV~kLiLvs-P~Gf~~~~~~~~~~~~~~~~w~ 214 (365)
T KOG4409|consen 139 PTTAEKEFVESIEQWRKKMGLEK-MILV--GHSFGGYLAAKYALKYPERVEKLILVS-PWGFPEKPDSEPEFTKPPPEWY 214 (365)
T ss_pred cccchHHHHHHHHHHHHHcCCcc-eeEe--eccchHHHHHHHHHhChHhhceEEEec-ccccccCCCcchhhcCCChHHH
Confidence 22234679999999999999997 5666 777765 58899999999999999985 543221 1 11 0111
Q ss_pred hhhcccchhhhhhhHHHHHHHHHhCCCcccccc------------cccc-ccccccc-cCC-chhHHHHHHHhc-ch--h
Q 022534 156 QLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLD------------KADV-YRLPYLA-SSG-PGFALLEAARKV-NF--K 217 (295)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~-~~~~~~~-~~~-~~~~~~~~~~~~-~~--~ 217 (295)
....+. ....+....-|++..-.+.+.+.. ..+. ..+-|.. ..+ .|......+... .+ +
T Consensus 215 ~~~~~~---~~~~nPl~~LR~~Gp~Gp~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~Ar~ 291 (365)
T KOG4409|consen 215 KALFLV---ATNFNPLALLRLMGPLGPKLVSRLRPDRFRKFPSLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGWARR 291 (365)
T ss_pred hhhhhh---hhcCCHHHHHHhccccchHHHhhhhHHHHHhccccchhHHHHHHHHHhcCCCCcHHHHHHHHHhccchhhh
Confidence 100000 111111111222221111111111 1111 1111111 111 222222221111 00 1
Q ss_pred hhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhc-CCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHhc
Q 022534 218 DISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKG-NPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLNY 294 (295)
Q Consensus 218 ~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~-~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (295)
..++++.. -+-+||+++|+|++|++ +...+.++.+. ....++.+++|++||.+.+|+|+.|++.|..++...
T Consensus 292 Pm~~r~~~----l~~~~pv~fiyG~~dWm-D~~~g~~~~~~~~~~~~~~~~v~~aGHhvylDnp~~Fn~~v~~~~~~~ 364 (365)
T KOG4409|consen 292 PMIQRLRE----LKKDVPVTFIYGDRDWM-DKNAGLEVTKSLMKEYVEIIIVPGAGHHVYLDNPEFFNQIVLEECDKV 364 (365)
T ss_pred hHHHHHHh----hccCCCEEEEecCcccc-cchhHHHHHHHhhcccceEEEecCCCceeecCCHHHHHHHHHHHHhcc
Confidence 12222211 12269999999999975 45566666654 333479999999999999999999999999998764
No 22
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.96 E-value=1.5e-28 Score=217.40 Aligned_cols=260 Identities=16% Similarity=0.240 Sum_probs=159.6
Q ss_pred ccceeeEEeCcEEEEEEEcCCCC--CCCceEEEEcCCCCCC-ccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCC
Q 022534 10 REYGSYIKSGEYRWFVRETGSAD--SRLGTIVFLHGAPSHS-YSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDF 86 (295)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~g~~~--~~~~~vv~lHG~~~~~-~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~ 86 (295)
++.+.|...+|..++|..++++. +++++|||+||++++. +.|..++..|+++||+|+++|+||||.|+++.. +
T Consensus 32 ~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~----~ 107 (330)
T PLN02298 32 GSKSFFTSPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLRA----Y 107 (330)
T ss_pred cccceEEcCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCccc----c
Confidence 44667777899999998876532 3467899999998764 356677778987799999999999999985432 2
Q ss_pred CCCHHHHHHHHHHHHHHhCCC-----CceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcc
Q 022534 87 DFTENEFHEELDKLLDVLEVK-----YPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIP 160 (295)
Q Consensus 87 ~~~~~~~~~~l~~~~~~l~~~-----~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~ 160 (295)
..+.+.+++|+.++++.+... .+++|+ |||+| .+++.++.++|++|+++|++++...........+....
T Consensus 108 ~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~--GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~-- 183 (330)
T PLN02298 108 VPNVDLVVEDCLSFFNSVKQREEFQGLPRFLY--GESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIRPPWPIPQ-- 183 (330)
T ss_pred CCCHHHHHHHHHHHHHHHHhcccCCCCCEEEE--EecchhHHHHHHHhcCcccceeEEEecccccCCcccCCchHHHH--
Confidence 346788999999999987532 356776 67765 56778888999999999998654322111000000000
Q ss_pred cchhhhhhhHHHHHHHHHhC----CCccccccc-----ccccc-ccccccCCchhH-HHHHHHhcchhhhhHhhhcCcCC
Q 022534 161 LLGEFTAQNAIMAERFIEAG----SPYVLKLDK-----ADVYR-LPYLASSGPGFA-LLEAARKVNFKDISSRIGAGFSS 229 (295)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~-----~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 229 (295)
.. ....++.... ......... ..... -+......+... +..... ..+.+... .
T Consensus 184 ----~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~--l 247 (330)
T PLN02298 184 ----IL----TFVARFLPTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLR------VTDYLGKK--L 247 (330)
T ss_pred ----HH----HHHHHHCCCCccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHH------HHHHHHHh--h
Confidence 00 0001111000 000000000 00000 000000000000 111110 00111111 2
Q ss_pred CCCCCcEEEEEeCCCCCCCcchHHHHHhcCC-CCeEEEEecCCCCCCCCCChHH----HHHHHHHHHHh
Q 022534 230 GSWDKPVLVAWGISDKYLPQSVAEEFQKGNP-NVVKLQMIEGAGHMPQEDWPEK----VVDGLRYFFLN 293 (295)
Q Consensus 230 ~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~----~~~~i~~fl~~ 293 (295)
..+++|+|+|+|++|.+++++.++.+++.++ .++++++++++||+++.|+|+. +.+.|.+||..
T Consensus 248 ~~i~~PvLii~G~~D~ivp~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~ 316 (330)
T PLN02298 248 KDVSIPFIVLHGSADVVTDPDVSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNE 316 (330)
T ss_pred hhcCCCEEEEecCCCCCCCHHHHHHHHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHH
Confidence 3678999999999999999999999887764 2479999999999999998864 66778888865
No 23
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.96 E-value=4.4e-29 Score=221.85 Aligned_cols=265 Identities=18% Similarity=0.235 Sum_probs=154.6
Q ss_pred eEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCc------------cchhhHH---HhhhCCCeEEEeCCCCCCCCCCC
Q 022534 15 YIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSY------------SYRNVMS---QMSDAGFHCFAPDWLGFGFSDKP 79 (295)
Q Consensus 15 ~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~------------~w~~~~~---~l~~~~~~via~Dl~G~G~S~~~ 79 (295)
+...+|++++|++.|++. +|+|||||+.+++. .|..+++ .|...+|+||++|+||||.|..
T Consensus 40 ~~~~~~~~l~y~~~G~~~---~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~- 115 (343)
T PRK08775 40 HAGLEDLRLRYELIGPAG---APVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSLD- 115 (343)
T ss_pred CCCCCCceEEEEEeccCC---CCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCCC-
Confidence 344578999999988632 25777877766554 6888886 5743479999999999998842
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhh-
Q 022534 80 EKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQL- 157 (295)
Q Consensus 80 ~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~- 157 (295)
. .|+++++++|+.+++++++++++++++ |||+| .+++.+|.++|++|+++|++++..... +........
T Consensus 116 -~-----~~~~~~~a~dl~~ll~~l~l~~~~~lv--G~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~~-~~~~~~~~~~ 186 (343)
T PRK08775 116 -V-----PIDTADQADAIALLLDALGIARLHAFV--GYSYGALVGLQFASRHPARVRTLVVVSGAHRAH-PYAAAWRALQ 186 (343)
T ss_pred -C-----CCCHHHHHHHHHHHHHHcCCCcceEEE--EECHHHHHHHHHHHHChHhhheEEEECccccCC-HHHHHHHHHH
Confidence 1 246789999999999999998765566 77765 578899999999999999997643221 100000000
Q ss_pred hcc-cchhh--hhhhH-HHHHHH-HH-hCCCc-cccccccccccccccccCCchhHHH----HHHHhcch---hhhhHhh
Q 022534 158 RIP-LLGEF--TAQNA-IMAERF-IE-AGSPY-VLKLDKADVYRLPYLASSGPGFALL----EAARKVNF---KDISSRI 223 (295)
Q Consensus 158 ~~~-~~~~~--~~~~~-~~~~~~-~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~---~~~~~~~ 223 (295)
+.. ..... ..... .....+ .. ..... .............-.........+. ........ ......+
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 266 (343)
T PRK08775 187 RRAVALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQYVARTPVNAYLRLSESI 266 (343)
T ss_pred HHHHHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHHHHHHHHHHHHHhcChhHHHHHHHHH
Confidence 000 00000 00000 000000 00 00000 0000000000000000000000000 00000000 0001111
Q ss_pred hc-CcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcC-CCCeEEEEecC-CCCCCCCCChHHHHHHHHHHHHh
Q 022534 224 GA-GFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGN-PNVVKLQMIEG-AGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 224 ~~-~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~-~~~~~~~~i~~-~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
.. .....++++|+|+|+|++|.+++++...++.+.+ ++ ++++++++ +||++++|+|++|++.|++||.+
T Consensus 267 ~~~~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~-a~l~~i~~~aGH~~~lE~Pe~~~~~l~~FL~~ 338 (343)
T PRK08775 267 DLHRVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLGPR-GSLRVLRSPYGHDAFLKETDRIDAILTTALRS 338 (343)
T ss_pred hhcCCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCCC-CeEEEEeCCccHHHHhcCHHHHHHHHHHHHHh
Confidence 00 0112478999999999999999988888888877 55 79999985 99999999999999999999976
No 24
>PRK07581 hypothetical protein; Validated
Probab=99.96 E-value=1.9e-28 Score=217.55 Aligned_cols=264 Identities=16% Similarity=0.247 Sum_probs=153.3
Q ss_pred CcEEEEEEEcCCCCC-CCceEEEEcCCCCCCccchhhH---HHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHH---
Q 022534 19 GEYRWFVRETGSADS-RLGTIVFLHGAPSHSYSYRNVM---SQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTEN--- 91 (295)
Q Consensus 19 ~~~~~~~~~~g~~~~-~~~~vv~lHG~~~~~~~w~~~~---~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~--- 91 (295)
+|.+++|.+.|++.+ ..|+||++||+++++..|..++ +.|.+.+|+||++|+||||+|+.+... ...|+.+
T Consensus 24 ~~~~l~y~~~G~~~~~~~~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~--~~~~~~~~~~ 101 (339)
T PRK07581 24 PDARLAYKTYGTLNAAKDNAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNT--PAPFNAARFP 101 (339)
T ss_pred CCceEEEEecCccCCCCCCEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCC--CCCCCCCCCC
Confidence 578999999986422 2356777777777777776554 467545799999999999999876421 0123332
Q ss_pred --HHHHHHHH----HHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhh-hhhh----c
Q 022534 92 --EFHEELDK----LLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLF-QQLR----I 159 (295)
Q Consensus 92 --~~~~~l~~----~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~-~~~~----~ 159 (295)
.+++++.+ +++++++++.+++| |||+| .+|+.+|.+||++|+++|++++..... ...... .... .
T Consensus 102 ~~~~~~~~~~~~~~l~~~lgi~~~~~lv--G~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~~-~~~~~~~~~~~~~l~~ 178 (339)
T PRK07581 102 HVTIYDNVRAQHRLLTEKFGIERLALVV--GWSMGAQQTYHWAVRYPDMVERAAPIAGTAKTT-PHNFVFLEGLKAALTA 178 (339)
T ss_pred ceeHHHHHHHHHHHHHHHhCCCceEEEE--EeCHHHHHHHHHHHHCHHHHhhheeeecCCCCC-HHHHHHHHHHHHHHHh
Confidence 24566655 77889998644566 77776 578899999999999999986543211 000000 0000 0
Q ss_pred -cc--------chh--hhhhhHHH-----HHHHHHhCCCccccccc-ccccc---ccccccCCch-h-HHHHHHHhcch-
Q 022534 160 -PL--------LGE--FTAQNAIM-----AERFIEAGSPYVLKLDK-ADVYR---LPYLASSGPG-F-ALLEAARKVNF- 216 (295)
Q Consensus 160 -~~--------~~~--~~~~~~~~-----~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~-~-~~~~~~~~~~~- 216 (295)
+. ... ........ ...+............. .+... ........++ . ..+.......+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 258 (339)
T PRK07581 179 DPAFNGGWYAEPPERGLRAHARVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWEGNFLPRDPNNLLAMLWTWQRGDIS 258 (339)
T ss_pred CCCCCCCCCCCcHHHHHHHHHHHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHHHhhcccCcccHHHHHHHhhhcccc
Confidence 00 000 00000000 01111100000000000 00000 0000000111 0 00001110000
Q ss_pred ------hhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecC-CCCCCCCCChHHHHHHHHH
Q 022534 217 ------KDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEG-AGHMPQEDWPEKVVDGLRY 289 (295)
Q Consensus 217 ------~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~-~gH~~~~e~p~~~~~~i~~ 289 (295)
.+.... .+++++|||+|+|++|.+++++.+..+.+.+++ ++++++++ |||++++|+|++++..|++
T Consensus 259 ~~~~~~~d~~~~------L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~ip~-a~l~~i~~~~GH~~~~~~~~~~~~~~~~ 331 (339)
T PRK07581 259 RNPAYGGDLAAA------LGSITAKTFVMPISTDLYFPPEDCEAEAALIPN-AELRPIESIWGHLAGFGQNPADIAFIDA 331 (339)
T ss_pred cCcccCCCHHHH------HhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCC-CeEEEeCCCCCccccccCcHHHHHHHHH
Confidence 011111 136799999999999999999999999999987 79999999 9999999999999999999
Q ss_pred HHHhc
Q 022534 290 FFLNY 294 (295)
Q Consensus 290 fl~~~ 294 (295)
|+..+
T Consensus 332 ~~~~~ 336 (339)
T PRK07581 332 ALKEL 336 (339)
T ss_pred HHHHH
Confidence 99874
No 25
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.96 E-value=6.7e-28 Score=202.92 Aligned_cols=247 Identities=24% Similarity=0.385 Sum_probs=154.7
Q ss_pred EEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 022534 23 WFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLD 102 (295)
Q Consensus 23 ~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~ 102 (295)
++|...|+++ .+|+|||+||++.++..|..+++.|.. +|+|+++|+||||.|+.+.. .++.+++++++.++++
T Consensus 2 ~~~~~~g~~~-~~~~li~~hg~~~~~~~~~~~~~~l~~-~~~v~~~d~~G~G~s~~~~~-----~~~~~~~~~~~~~~i~ 74 (251)
T TIGR02427 2 LHYRLDGAAD-GAPVLVFINSLGTDLRMWDPVLPALTP-DFRVLRYDKRGHGLSDAPEG-----PYSIEDLADDVLALLD 74 (251)
T ss_pred ceEEeecCCC-CCCeEEEEcCcccchhhHHHHHHHhhc-ccEEEEecCCCCCCCCCCCC-----CCCHHHHHHHHHHHHH
Confidence 5677777642 357899999999999999999999975 89999999999999976432 4578899999999999
Q ss_pred HhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccch-hhhhhhHHHHHHHHHhC
Q 022534 103 VLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLG-EFTAQNAIMAERFIEAG 180 (295)
Q Consensus 103 ~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 180 (295)
.++.++ ++++ |||+| .+++.+|.++|++|+++++++++...... ......... +.. ............+....
T Consensus 75 ~~~~~~-v~li--G~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 149 (251)
T TIGR02427 75 HLGIER-AVFC--GLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTP-ESWNARIAA-VRAEGLAALADAVLERWFTPG 149 (251)
T ss_pred HhCCCc-eEEE--EeCchHHHHHHHHHHCHHHhHHHhhccCccccCch-hhHHHHHhh-hhhccHHHHHHHHHHHHcccc
Confidence 998764 6666 67765 56788889999999999988654321110 000000000 000 00000000011111000
Q ss_pred CCccccccccccccccccccCCchhH-HHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcC
Q 022534 181 SPYVLKLDKADVYRLPYLASSGPGFA-LLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGN 259 (295)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~ 259 (295)
... ........+..........++. ........ +.... ..++++|+++++|++|.+++.+....+.+..
T Consensus 150 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~------~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~ 219 (251)
T TIGR02427 150 FRE-AHPARLDLYRNMLVRQPPDGYAGCCAAIRDA---DFRDR------LGAIAVPTLCIAGDQDGSTPPELVREIADLV 219 (251)
T ss_pred ccc-CChHHHHHHHHHHHhcCHHHHHHHHHHHhcc---cHHHH------hhhcCCCeEEEEeccCCcCChHHHHHHHHhC
Confidence 000 0000000000000000000000 00000000 01111 1257899999999999999999888898888
Q ss_pred CCCeEEEEecCCCCCCCCCChHHHHHHHHHHHH
Q 022534 260 PNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFL 292 (295)
Q Consensus 260 ~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 292 (295)
++ .++++++++||++++|+|+++++.|.+|+.
T Consensus 220 ~~-~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 220 PG-ARFAEIRGAGHIPCVEQPEAFNAALRDFLR 251 (251)
T ss_pred CC-ceEEEECCCCCcccccChHHHHHHHHHHhC
Confidence 87 699999999999999999999999999974
No 26
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.96 E-value=1.1e-27 Score=202.33 Aligned_cols=232 Identities=15% Similarity=0.180 Sum_probs=136.9
Q ss_pred CceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEEEE
Q 022534 35 LGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVV 114 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~ 114 (295)
+|+|||+||+++++..|..+++.|+ +|+|+++|+||||.|+.+.. .+.+++++++.++++.+++++ ++++
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~l~--~~~vi~~D~~G~G~S~~~~~------~~~~~~~~~l~~~l~~~~~~~-~~lv- 71 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEALP--DYPRLYIDLPGHGGSAAISV------DGFADVSRLLSQTLQSYNILP-YWLV- 71 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHHcC--CCCEEEecCCCCCCCCCccc------cCHHHHHHHHHHHHHHcCCCC-eEEE-
Confidence 3689999999999999999999983 69999999999999987532 267899999999999998775 6666
Q ss_pred ecccch-HHHHHHHHhCcCc-cceeEEEcCCCCCCCCCchhhhhhhc--ccchhhhhhh-HHHHHHHHHhCCCccccccc
Q 022534 115 QGFLVG-SYGLTWALKNPSR-ISKLAILNSPLTASSPLPGLFQQLRI--PLLGEFTAQN-AIMAERFIEAGSPYVLKLDK 189 (295)
Q Consensus 115 ~G~~~G-~~~~~~a~~~p~~-v~~lil~~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 189 (295)
|||+| .+++.+|.++|++ |+++++++++..... .......... .+...+.... ......+.............
T Consensus 72 -G~S~Gg~va~~~a~~~~~~~v~~lvl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (242)
T PRK11126 72 -GYSLGGRIAMYYACQGLAGGLCGLIVEGGNPGLQN-AEERQARWQNDRQWAQRFRQEPLEQVLADWYQQPVFASLNAEQ 149 (242)
T ss_pred -EECHHHHHHHHHHHhCCcccccEEEEeCCCCCCCC-HHHHHHHHhhhHHHHHHhccCcHHHHHHHHHhcchhhccCccH
Confidence 77765 5788888998765 999998865432111 0100000000 0000000000 00011111000000000000
Q ss_pred cccccccccccCCchhHHHHHHHhcch---hhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEE
Q 022534 190 ADVYRLPYLASSGPGFALLEAARKVNF---KDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQ 266 (295)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~ 266 (295)
...+.. ......+............ .+.... ..+++||+++|+|++|+.+. .+.+. .+ ++++
T Consensus 150 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~------l~~i~~P~lii~G~~D~~~~-----~~~~~-~~-~~~~ 214 (242)
T PRK11126 150 RQQLVA--KRSNNNGAAVAAMLEATSLAKQPDLRPA------LQALTFPFYYLCGERDSKFQ-----ALAQQ-LA-LPLH 214 (242)
T ss_pred HHHHHH--hcccCCHHHHHHHHHhcCcccCCcHHHH------hhccCCCeEEEEeCCcchHH-----HHHHH-hc-CeEE
Confidence 000000 0000001111111100000 011111 13679999999999998542 23333 23 7999
Q ss_pred EecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 267 MIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 267 ~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
++++|||++++|+|+++++.|..|+..
T Consensus 215 ~i~~~gH~~~~e~p~~~~~~i~~fl~~ 241 (242)
T PRK11126 215 VIPNAGHNAHRENPAAFAASLAQILRL 241 (242)
T ss_pred EeCCCCCchhhhChHHHHHHHHHHHhh
Confidence 999999999999999999999999975
No 27
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.96 E-value=1.8e-27 Score=199.77 Aligned_cols=234 Identities=21% Similarity=0.270 Sum_probs=139.6
Q ss_pred CceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEEEE
Q 022534 35 LGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVV 114 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~ 114 (295)
+|+|||+||+++++..|..+++.|++ +|+|+++|+||||.|+... .++.+++++++.+.+ +++++++
T Consensus 4 ~~~iv~~HG~~~~~~~~~~~~~~l~~-~~~vi~~d~~G~G~s~~~~------~~~~~~~~~~~~~~~-----~~~~~lv- 70 (245)
T TIGR01738 4 NVHLVLIHGWGMNAEVFRCLDEELSA-HFTLHLVDLPGHGRSRGFG------PLSLADAAEAIAAQA-----PDPAIWL- 70 (245)
T ss_pred CceEEEEcCCCCchhhHHHHHHhhcc-CeEEEEecCCcCccCCCCC------CcCHHHHHHHHHHhC-----CCCeEEE-
Confidence 36899999999999999999999985 7999999999999997542 235667776665543 2357777
Q ss_pred ecccchH-HHHHHHHhCcCccceeEEEcCCCCCC--CCCchhhh-hhhcccchhhhhhhHHHHHHHHHh---CCCccccc
Q 022534 115 QGFLVGS-YGLTWALKNPSRISKLAILNSPLTAS--SPLPGLFQ-QLRIPLLGEFTAQNAIMAERFIEA---GSPYVLKL 187 (295)
Q Consensus 115 ~G~~~G~-~~~~~a~~~p~~v~~lil~~~p~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 187 (295)
|||+|+ +++.+|.++|++++++|++++..... ..++.... .....+...+.........++... ..... ..
T Consensus 71 -G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 148 (245)
T TIGR01738 71 -GWSLGGLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQTLGTPTA-RQ 148 (245)
T ss_pred -EEcHHHHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcc-ch
Confidence 667664 67888899999999999886532211 11110000 000000000000000001111110 00000 00
Q ss_pred cccccccccccccCCch-hHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEE
Q 022534 188 DKADVYRLPYLASSGPG-FALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQ 266 (295)
Q Consensus 188 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~ 266 (295)
....... .+.....+. ..+..........+....+ .++++|+++|+|++|.+++++....+.+.+++ ++++
T Consensus 149 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l------~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~-~~~~ 220 (245)
T TIGR01738 149 DARALKQ-TLLARPTPNVQVLQAGLEILATVDLRQPL------QNISVPFLRLYGYLDGLVPAKVVPYLDKLAPH-SELY 220 (245)
T ss_pred HHHHHHH-HhhccCCCCHHHHHHHHHHhhcccHHHHH------hcCCCCEEEEeecCCcccCHHHHHHHHHhCCC-CeEE
Confidence 0000000 000000010 0111111000000111111 26789999999999999999888889888986 7999
Q ss_pred EecCCCCCCCCCChHHHHHHHHHHH
Q 022534 267 MIEGAGHMPQEDWPEKVVDGLRYFF 291 (295)
Q Consensus 267 ~i~~~gH~~~~e~p~~~~~~i~~fl 291 (295)
+++++||++++|+|++|++.|.+|+
T Consensus 221 ~~~~~gH~~~~e~p~~~~~~i~~fi 245 (245)
T TIGR01738 221 IFAKAAHAPFLSHAEAFCALLVAFK 245 (245)
T ss_pred EeCCCCCCccccCHHHHHHHHHhhC
Confidence 9999999999999999999999995
No 28
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.96 E-value=1.5e-27 Score=214.53 Aligned_cols=267 Identities=16% Similarity=0.182 Sum_probs=156.2
Q ss_pred CcEEEEEEEcCCCCC-CCceEEEEcCCCCCCcc-------------chhhHH---HhhhCCCeEEEeCCCC-CCCCCCCC
Q 022534 19 GEYRWFVRETGSADS-RLGTIVFLHGAPSHSYS-------------YRNVMS---QMSDAGFHCFAPDWLG-FGFSDKPE 80 (295)
Q Consensus 19 ~~~~~~~~~~g~~~~-~~~~vv~lHG~~~~~~~-------------w~~~~~---~l~~~~~~via~Dl~G-~G~S~~~~ 80 (295)
+|.+++|.++|++++ .+|+|||+||+++++.. |..++. .|...+|+||++|+|| ||.|+.+.
T Consensus 31 ~~~~~~y~~~G~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~ 110 (379)
T PRK00175 31 PPVELAYETYGTLNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPS 110 (379)
T ss_pred CCceEEEEeccccCCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCC
Confidence 568899999986322 25799999999998874 666652 3323489999999999 36665432
Q ss_pred CCC----CC-----CCCCHHHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCC
Q 022534 81 KGY----DD-----FDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPL 150 (295)
Q Consensus 81 ~~~----~~-----~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~ 150 (295)
... .. ..|+++++++++.++++++++++.++++ |||+| .+++.+|.++|++|+++|++++........
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lv--G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~ 188 (379)
T PRK00175 111 SINPDTGKPYGSDFPVITIRDWVRAQARLLDALGITRLAAVV--GGSMGGMQALEWAIDYPDRVRSALVIASSARLSAQN 188 (379)
T ss_pred CCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCCCCceEEE--EECHHHHHHHHHHHhChHhhhEEEEECCCcccCHHH
Confidence 100 00 1578999999999999999998744566 77776 568899999999999999997644321100
Q ss_pred chhh----hhhhc-cc-c-hhh-----hhhhHHHHHHH------------HHhCCCccccccc---------cccccc--
Q 022534 151 PGLF----QQLRI-PL-L-GEF-----TAQNAIMAERF------------IEAGSPYVLKLDK---------ADVYRL-- 195 (295)
Q Consensus 151 ~~~~----~~~~~-~~-~-~~~-----~~~~~~~~~~~------------~~~~~~~~~~~~~---------~~~~~~-- 195 (295)
.... ..... +. . +.+ .........++ ............. ...+..
T Consensus 189 ~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~ 268 (379)
T PRK00175 189 IAFNEVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFDVEFQVESYLRYQ 268 (379)
T ss_pred HHHHHHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCCccchHHHHHHHH
Confidence 0000 00000 00 0 000 00000000010 0000000000000 000000
Q ss_pred --cccccCCc-hhH-HHHHHHhcch-----hhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCC---e
Q 022534 196 --PYLASSGP-GFA-LLEAARKVNF-----KDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNV---V 263 (295)
Q Consensus 196 --~~~~~~~~-~~~-~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~---~ 263 (295)
.+....++ .+. ........+. .+.... .+++++|||+|+|++|.+++++.++.+++.+++. +
T Consensus 269 ~~~~~~~~d~~~~~~~~~~~~~~d~~~~~~~d~~~~------l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~~~~ 342 (379)
T PRK00175 269 GDKFVERFDANSYLYLTRALDYFDPARGRGGDLAAA------LARIKARFLVVSFTSDWLFPPARSREIVDALLAAGADV 342 (379)
T ss_pred HHHHhhccCchHHHHHHHHHHhccccCCCCCCHHHH------HhcCCCCEEEEEECCccccCHHHHHHHHHHHHhcCCCe
Confidence 00000000 000 0011110100 001111 1378999999999999999999999999988862 2
Q ss_pred EEEEec-CCCCCCCCCChHHHHHHHHHHHHh
Q 022534 264 KLQMIE-GAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 264 ~~~~i~-~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
++++++ +|||++++|+|++|+++|++||..
T Consensus 343 ~l~~i~~~~GH~~~le~p~~~~~~L~~FL~~ 373 (379)
T PRK00175 343 SYAEIDSPYGHDAFLLDDPRYGRLVRAFLER 373 (379)
T ss_pred EEEEeCCCCCchhHhcCHHHHHHHHHHHHHh
Confidence 777775 999999999999999999999975
No 29
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.96 E-value=1.2e-27 Score=213.18 Aligned_cols=266 Identities=18% Similarity=0.245 Sum_probs=155.1
Q ss_pred eCcEEEEEEEcCCCC-CCCceEEEEcCCCCCCc-----------cchhhHH---HhhhCCCeEEEeCCCC--CCCCCCCC
Q 022534 18 SGEYRWFVRETGSAD-SRLGTIVFLHGAPSHSY-----------SYRNVMS---QMSDAGFHCFAPDWLG--FGFSDKPE 80 (295)
Q Consensus 18 ~~~~~~~~~~~g~~~-~~~~~vv~lHG~~~~~~-----------~w~~~~~---~l~~~~~~via~Dl~G--~G~S~~~~ 80 (295)
.+|.+++|.++|+++ ..+++|||+||+++++. .|+.++. .|...+|+|+++|+|| ||.|....
T Consensus 13 ~~~~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~ 92 (351)
T TIGR01392 13 LSDVRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSS 92 (351)
T ss_pred cCCceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCC
Confidence 467899999999632 22469999999998763 4777762 4544589999999999 55554311
Q ss_pred ---CC--C--CCCCCCHHHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCch
Q 022534 81 ---KG--Y--DDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPG 152 (295)
Q Consensus 81 ---~~--~--~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~ 152 (295)
.. + +...|+++++++++.++++++++++.++++ |||+| .+++.+|.++|++|+++|+++++.........
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~--G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 170 (351)
T TIGR01392 93 INPGGRPYGSDFPLITIRDDVKAQKLLLDHLGIEQIAAVV--GGSMGGMQALEWAIDYPERVRAIVVLATSARHSAWCIA 170 (351)
T ss_pred CCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCCCCceEEE--EECHHHHHHHHHHHHChHhhheEEEEccCCcCCHHHHH
Confidence 01 1 012478999999999999999998635566 77776 46888999999999999999765432211000
Q ss_pred hhhh----hhc-c-cc-hhhhh----hhHHHHHH------------HHHhCCCccccc---c-------cccccc-c---
Q 022534 153 LFQQ----LRI-P-LL-GEFTA----QNAIMAER------------FIEAGSPYVLKL---D-------KADVYR-L--- 195 (295)
Q Consensus 153 ~~~~----~~~-~-~~-~~~~~----~~~~~~~~------------~~~~~~~~~~~~---~-------~~~~~~-~--- 195 (295)
.... ... + +. +.+.. .......+ +.....+..... . ....+. .
T Consensus 171 ~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (351)
T TIGR01392 171 FNEVQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQSGESPASGFDTRFQVESYLRYQGD 250 (351)
T ss_pred HHHHHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcccccccccccCccchHHHHHHHHHH
Confidence 0000 000 0 00 00000 00000000 000000000000 0 000000 0
Q ss_pred cccccCCc-hh-HHHHHHHhcchh----hhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEE---
Q 022534 196 PYLASSGP-GF-ALLEAARKVNFK----DISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQ--- 266 (295)
Q Consensus 196 ~~~~~~~~-~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~--- 266 (295)
.+....++ .+ .....+...+.. +.... .+++++|+|+|+|++|.+++++.++.+++.+++ .+++
T Consensus 251 ~~~~~~d~~~~~~~~~~l~~~d~~~~~~~~~~~------l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~-~~~~v~~ 323 (351)
T TIGR01392 251 KFVDRFDANSYLYLTRALDTHDLGRGRGSLTEA------LSRIKAPFLVVSITSDWLFPPAESRELAKALPA-AGLRVTY 323 (351)
T ss_pred HHHhhcCcchHHHHHHHHHhcCCcCCCCCHHHH------HhhCCCCEEEEEeCCccccCHHHHHHHHHHHhh-cCCceEE
Confidence 00000000 00 001111111100 01111 236789999999999999999999999999987 4655
Q ss_pred --EecCCCCCCCCCChHHHHHHHHHHHH
Q 022534 267 --MIEGAGHMPQEDWPEKVVDGLRYFFL 292 (295)
Q Consensus 267 --~i~~~gH~~~~e~p~~~~~~i~~fl~ 292 (295)
++++|||++++|+|++|++.|.+||.
T Consensus 324 ~~i~~~~GH~~~le~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 324 VEIESPYGHDAFLVETDQVEELIRGFLR 351 (351)
T ss_pred EEeCCCCCcchhhcCHHHHHHHHHHHhC
Confidence 66899999999999999999999984
No 30
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.95 E-value=7.8e-27 Score=200.82 Aligned_cols=259 Identities=16% Similarity=0.133 Sum_probs=152.1
Q ss_pred CcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 022534 19 GEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELD 98 (295)
Q Consensus 19 ~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~ 98 (295)
||-+++|.+ ++..+|+|||+||++.+...|..+++.|+++||+|+++|+||||+|..... ..++++++++++.
T Consensus 5 ~~~~~~~~~---~~~~~p~vvliHG~~~~~~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~----~~~~~~~~~~~l~ 77 (273)
T PLN02211 5 NGEEVTDMK---PNRQPPHFVLIHGISGGSWCWYKIRCLMENSGYKVTCIDLKSAGIDQSDAD----SVTTFDEYNKPLI 77 (273)
T ss_pred ccccccccc---ccCCCCeEEEECCCCCCcCcHHHHHHHHHhCCCEEEEecccCCCCCCCCcc----cCCCHHHHHHHHH
Confidence 566666654 222357899999999999999999999987799999999999999864321 1257889999999
Q ss_pred HHHHHhCCCCceEEEEecccchH-HHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhh--hcccchhhhhhhHHHHHH
Q 022534 99 KLLDVLEVKYPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQL--RIPLLGEFTAQNAIMAER 175 (295)
Q Consensus 99 ~~~~~l~~~~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 175 (295)
+++++++..++++|| |||+|+ ++..++.++|++|+++|++++......... .... ..+....+. ..+...
T Consensus 78 ~~i~~l~~~~~v~lv--GhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~g~~~--~~~~~~~~~~~~~~~---~~~~~~ 150 (273)
T PLN02211 78 DFLSSLPENEKVILV--GHSAGGLSVTQAIHRFPKKICLAVYVAATMLKLGFQT--DEDMKDGVPDLSEFG---DVYELG 150 (273)
T ss_pred HHHHhcCCCCCEEEE--EECchHHHHHHHHHhChhheeEEEEeccccCCCCCCH--HHHHhccccchhhhc---cceeee
Confidence 999998533457777 677764 567778889999999999854221110000 0000 000000000 000000
Q ss_pred HH-HhCCCccccccccccccccccccCCchh-HHHHHHHh-cchhhhhHhhhcCcCCCCC-CCcEEEEEeCCCCCCCcch
Q 022534 176 FI-EAGSPYVLKLDKADVYRLPYLASSGPGF-ALLEAARK-VNFKDISSRIGAGFSSGSW-DKPVLVAWGISDKYLPQSV 251 (295)
Q Consensus 176 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~P~l~i~G~~D~~~~~~~ 251 (295)
+. ...................+........ .+...... ............. ...++ ++|+++|+|++|.++|++.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~vP~l~I~g~~D~~ip~~~ 229 (273)
T PLN02211 151 FGLGPDQPPTSAIIKKEFRRKILYQMSPQEDSTLAAMLLRPGPILALRSARFEE-ETGDIDKVPRVYIKTLHDHVVKPEQ 229 (273)
T ss_pred eccCCCCCCceeeeCHHHHHHHHhcCCCHHHHHHHHHhcCCcCccccccccccc-cccccCccceEEEEeCCCCCCCHHH
Confidence 00 0000000000000000000000000000 00000000 0000000000000 01245 7999999999999999999
Q ss_pred HHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHhc
Q 022534 252 AEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLNY 294 (295)
Q Consensus 252 ~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (295)
.+.+.+.++. .+++.++ +||.+++++|++|.+.|.++..++
T Consensus 230 ~~~m~~~~~~-~~~~~l~-~gH~p~ls~P~~~~~~i~~~a~~~ 270 (273)
T PLN02211 230 QEAMIKRWPP-SQVYELE-SDHSPFFSTPFLLFGLLIKAAASV 270 (273)
T ss_pred HHHHHHhCCc-cEEEEEC-CCCCccccCHHHHHHHHHHHHHHh
Confidence 9999999886 5899996 899999999999999999987664
No 31
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.95 E-value=4.1e-27 Score=205.90 Aligned_cols=245 Identities=26% Similarity=0.362 Sum_probs=149.8
Q ss_pred CCceEEEEcCCCCCCccchhhHHHhhhC-CCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEE
Q 022534 34 RLGTIVFLHGAPSHSYSYRNVMSQMSDA-GFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFL 112 (295)
Q Consensus 34 ~~~~vv~lHG~~~~~~~w~~~~~~l~~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~l 112 (295)
.+++||++|||+++...|+++++.|... |++|+++|++|||.|+..... ..|+..++...+..++...+.++ +++
T Consensus 57 ~~~pvlllHGF~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~---~~y~~~~~v~~i~~~~~~~~~~~-~~l 132 (326)
T KOG1454|consen 57 DKPPVLLLHGFGASSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRG---PLYTLRELVELIRRFVKEVFVEP-VSL 132 (326)
T ss_pred CCCcEEEeccccCCcccHhhhccccccccceEEEEEecCCCCcCCCCCCC---CceehhHHHHHHHHHHHhhcCcc-eEE
Confidence 4689999999999999999999999864 399999999999966554332 24788899999999999887765 778
Q ss_pred EEecccchH-HHHHHHHhCcCccceeE---EEcCCCCCCCCCchhhhh-hhc-c----cchhhhhhhH--HHHHHHHHhC
Q 022534 113 VVQGFLVGS-YGLTWALKNPSRISKLA---ILNSPLTASSPLPGLFQQ-LRI-P----LLGEFTAQNA--IMAERFIEAG 180 (295)
Q Consensus 113 v~~G~~~G~-~~~~~a~~~p~~v~~li---l~~~p~~~~~~~~~~~~~-~~~-~----~~~~~~~~~~--~~~~~~~~~~ 180 (295)
+ |||.|+ +|..+|+.+|+.|++++ +++++............. +.. . .......... ..........
T Consensus 133 v--ghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 210 (326)
T KOG1454|consen 133 V--GHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFLSALELLIPLSLTEPVRLVSEGLLRCL 210 (326)
T ss_pred E--EeCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHhhhhhccHhhhcCccccccchhheeHhhhcce
Confidence 7 677765 58889999999999999 554444432222111100 000 0 0000000000 0000000000
Q ss_pred -CC-ccccccccccccccccccCCchhHHHHHHH-----hcch-hhhhHhhhcCcCCCCC-CCcEEEEEeCCCCCCCcch
Q 022534 181 -SP-YVLKLDKADVYRLPYLASSGPGFALLEAAR-----KVNF-KDISSRIGAGFSSGSW-DKPVLVAWGISDKYLPQSV 251 (295)
Q Consensus 181 -~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~-~~~~~~~~~~~~~~~~-~~P~l~i~G~~D~~~~~~~ 251 (295)
.. ............. ..... ..-+....+ .... ....... .+++ +||+|+|+|++|++++.+.
T Consensus 211 ~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~i~~~pvlii~G~~D~~~p~~~ 282 (326)
T KOG1454|consen 211 KVVYTDPSRLLEKLLHL--LSRPV-KEHFHRDARLSLFLELLGFDENLLSL-----IKKIWKCPVLIIWGDKDQIVPLEL 282 (326)
T ss_pred eeeccccccchhhhhhh--eeccc-ccchhhhheeeEEEeccCccchHHHh-----hccccCCceEEEEcCcCCccCHHH
Confidence 00 0000000000000 00000 000000000 0000 0011100 1233 5999999999999999999
Q ss_pred HHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 252 AEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 252 ~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
+..+.+.+++ +++++|++|||.+|+|.|++|++.|..|+..
T Consensus 283 ~~~~~~~~pn-~~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~~ 323 (326)
T KOG1454|consen 283 AEELKKKLPN-AELVEIPGAGHLPHLERPEEVAALLRSFIAR 323 (326)
T ss_pred HHHHHhhCCC-ceEEEeCCCCcccccCCHHHHHHHHHHHHHH
Confidence 9999998886 7999999999999999999999999999976
No 32
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.95 E-value=1.5e-26 Score=209.03 Aligned_cols=261 Identities=20% Similarity=0.269 Sum_probs=147.6
Q ss_pred EEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 022534 22 RWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLL 101 (295)
Q Consensus 22 ~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~ 101 (295)
++....+.. +..+|+|||+||+++++..|..+++.|++ +|+|+++|+||||.|+++...........+.+++++.+++
T Consensus 93 ~~~~~~~~~-~~~~p~vvllHG~~~~~~~~~~~~~~L~~-~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~ 170 (402)
T PLN02894 93 FINTVTFDS-KEDAPTLVMVHGYGASQGFFFRNFDALAS-RFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWR 170 (402)
T ss_pred eEEEEEecC-CCCCCEEEEECCCCcchhHHHHHHHHHHh-CCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHH
Confidence 444444332 23458999999999999999999999986 6999999999999998754221110111234678888999
Q ss_pred HHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCc--hhhhhhhcccchh---------hhhh-
Q 022534 102 DVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLP--GLFQQLRIPLLGE---------FTAQ- 168 (295)
Q Consensus 102 ~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~--~~~~~~~~~~~~~---------~~~~- 168 (295)
+.++++ +++++ |||+| .+++.+|.++|++|+++|+++++........ .........+.+. +...
T Consensus 171 ~~l~~~-~~~lv--GhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 247 (402)
T PLN02894 171 KAKNLS-NFILL--GHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLWESNFTPQK 247 (402)
T ss_pred HHcCCC-CeEEE--EECHHHHHHHHHHHhCchhhcEEEEECCccccCCcchhHHHHhhcchhHHHHHHHHHhhcCCCHHH
Confidence 988887 46776 67766 4678889999999999999864332211100 0000000000000 0000
Q ss_pred --------hHHHHHHHHHhC-----CCccccccccccc-cccc--cccCCchhHHHHHHHhcc---hhhhhHhhhcCcCC
Q 022534 169 --------NAIMAERFIEAG-----SPYVLKLDKADVY-RLPY--LASSGPGFALLEAARKVN---FKDISSRIGAGFSS 229 (295)
Q Consensus 169 --------~~~~~~~~~~~~-----~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 229 (295)
...+..++.... ............+ ...+ ......+........... ..+.... .
T Consensus 248 ~~~~~gp~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------l 321 (402)
T PLN02894 248 IIRGLGPWGPNLVRRYTTARFGAHSTGDILSEEESKLLTDYVYHTLAAKASGELCLKYIFSFGAFARKPLLES------A 321 (402)
T ss_pred HHHhccchhHHHHHHHHHHHhhhcccccccCcchhhHHHHHHHHhhcCCCchHHHHHHhccCchhhcchHhhh------c
Confidence 000001111000 0000000000000 0000 000001111001110000 0011111 2
Q ss_pred CCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHhc
Q 022534 230 GSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLNY 294 (295)
Q Consensus 230 ~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (295)
.++++|+++|+|++|.+.+ .....+.+..+..++++++++|||++++|+|++|+++|.+|++++
T Consensus 322 ~~I~vP~liI~G~~D~i~~-~~~~~~~~~~~~~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~~~~ 385 (402)
T PLN02894 322 SEWKVPTTFIYGRHDWMNY-EGAVEARKRMKVPCEIIRVPQGGHFVFLDNPSGFHSAVLYACRKY 385 (402)
T ss_pred ccCCCCEEEEEeCCCCCCc-HHHHHHHHHcCCCCcEEEeCCCCCeeeccCHHHHHHHHHHHHHHh
Confidence 3679999999999998764 555566655543478999999999999999999999999998764
No 33
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.95 E-value=2.1e-26 Score=199.47 Aligned_cols=273 Identities=22% Similarity=0.330 Sum_probs=170.1
Q ss_pred ccccceeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCC-CCCCCCCCC
Q 022534 8 KGREYGSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSD-KPEKGYDDF 86 (295)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~-~~~~~~~~~ 86 (295)
..+..+.|...+|..++|..+-.+.+++.+||++||+++++..|.++++.|..+||.|+++|+||||+|. +......
T Consensus 7 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~g~Vvl~HG~~Eh~~ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~~~-- 84 (298)
T COG2267 7 RTRTEGYFTGADGTRLRYRTWAAPEPPKGVVVLVHGLGEHSGRYEELADDLAARGFDVYALDLRGHGRSPRGQRGHVD-- 84 (298)
T ss_pred cccccceeecCCCceEEEEeecCCCCCCcEEEEecCchHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCcCCch--
Confidence 3456788999999999999987665555799999999999999999999999999999999999999998 4333221
Q ss_pred CCCHHHHHHHHHHHHHHhCC---CCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCC--Cchhhhhhhcc
Q 022534 87 DFTENEFHEELDKLLDVLEV---KYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSP--LPGLFQQLRIP 160 (295)
Q Consensus 87 ~~~~~~~~~~l~~~~~~l~~---~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~--~~~~~~~~~~~ 160 (295)
+.++|..|+..+++.+.. ..|++++ |||+| .+++.++.+++.+|+++||+ +|+..... ....+......
T Consensus 85 --~f~~~~~dl~~~~~~~~~~~~~~p~~l~--gHSmGg~Ia~~~~~~~~~~i~~~vLs-sP~~~l~~~~~~~~~~~~~~~ 159 (298)
T COG2267 85 --SFADYVDDLDAFVETIAEPDPGLPVFLL--GHSMGGLIALLYLARYPPRIDGLVLS-SPALGLGGAILRLILARLALK 159 (298)
T ss_pred --hHHHHHHHHHHHHHHHhccCCCCCeEEE--EeCcHHHHHHHHHHhCCccccEEEEE-CccccCChhHHHHHHHHHhcc
Confidence 357899999999998753 4678888 66665 57888999999999999887 56654431 11111111111
Q ss_pred cchhhhhhhHHHHHHHHHhCCCccccccc--ccccc-ccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEE
Q 022534 161 LLGEFTAQNAIMAERFIEAGSPYVLKLDK--ADVYR-LPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVL 237 (295)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l 237 (295)
.+.+......... ...........+.+. .+.+. -|......+...+........ + .........+++|+|
T Consensus 160 ~~~~~~p~~~~~~-~~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~-~-----~~~~~~~~~~~~PvL 232 (298)
T COG2267 160 LLGRIRPKLPVDS-NLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAG-R-----VPALRDAPAIALPVL 232 (298)
T ss_pred cccccccccccCc-ccccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhh-c-----ccchhccccccCCEE
Confidence 1110000000000 000000000000000 00000 011111111122222211111 0 000011236789999
Q ss_pred EEEeCCCCCCC-cchHHHHHhcCCC-CeEEEEecCCCCCCCCCC-h--HHHHHHHHHHHHhc
Q 022534 238 VAWGISDKYLP-QSVAEEFQKGNPN-VVKLQMIEGAGHMPQEDW-P--EKVVDGLRYFFLNY 294 (295)
Q Consensus 238 ~i~G~~D~~~~-~~~~~~~~~~~~~-~~~~~~i~~~gH~~~~e~-p--~~~~~~i~~fl~~~ 294 (295)
+++|++|.+++ .+...++.+..+. ++++++++|++|.++.|. . +++.+.+.+|+.+.
T Consensus 233 ll~g~~D~vv~~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~ 294 (298)
T COG2267 233 LLQGGDDRVVDNVEGLARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAEA 294 (298)
T ss_pred EEecCCCccccCcHHHHHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHhh
Confidence 99999999998 5666666554332 368999999999988774 5 89999999999763
No 34
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.95 E-value=1.9e-26 Score=198.32 Aligned_cols=267 Identities=20% Similarity=0.219 Sum_probs=154.5
Q ss_pred ceeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCcc-chhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCH
Q 022534 12 YGSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYS-YRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTE 90 (295)
Q Consensus 12 ~~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~-w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~ 90 (295)
+..+++.++.++.|+..++.. .+++|||+||+++++.. |..+.+.+.+.||+|+++|+||||.|+.+... ...++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~-~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~--~~~~~~ 79 (288)
T TIGR01250 3 IEGIITVDGGYHLFTKTGGEG-EKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDS--DELWTI 79 (288)
T ss_pred ccceecCCCCeEEEEeccCCC-CCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcc--cccccH
Confidence 344577888888888877433 24799999998776655 45555556544899999999999999865321 112688
Q ss_pred HHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccch---hhh
Q 022534 91 NEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLG---EFT 166 (295)
Q Consensus 91 ~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~---~~~ 166 (295)
+++++++.+++++++.++ ++++ |||+| .+++.+|.++|++|++++++++..... ............+.. ...
T Consensus 80 ~~~~~~~~~~~~~~~~~~-~~li--G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 155 (288)
T TIGR01250 80 DYFVDELEEVREKLGLDK-FYLL--GHSWGGMLAQEYALKYGQHLKGLIISSMLDSAP-EYVKELNRLRKELPPEVRAAI 155 (288)
T ss_pred HHHHHHHHHHHHHcCCCc-EEEE--EeehHHHHHHHHHHhCccccceeeEecccccch-HHHHHHHHHHhhcChhHHHHH
Confidence 999999999999998775 6676 67766 467888889999999999886432211 000000000000000 000
Q ss_pred h--------hhHH---HHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhc-chh--hhhHhhhcCcCCCCC
Q 022534 167 A--------QNAI---MAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKV-NFK--DISSRIGAGFSSGSW 232 (295)
Q Consensus 167 ~--------~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~ 232 (295)
. .+.. ....+...... ........... ... . .....+..+... .+. .........-..+++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 230 (288)
T TIGR01250 156 KRCEASGDYDNPEYQEAVEVFYHHLLC--RTRKWPEALKH-LKS-G-MNTNVYNIMQGPNEFTITGNLKDWDITDKLSEI 230 (288)
T ss_pred HHHHhccCcchHHHHHHHHHHHHHhhc--ccccchHHHHH-Hhh-c-cCHHHHhcccCCccccccccccccCHHHHhhcc
Confidence 0 0000 00000000000 00000000000 000 0 000000000000 000 000000000011367
Q ss_pred CCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHH
Q 022534 233 DKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFL 292 (295)
Q Consensus 233 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 292 (295)
+||+++++|++|.+ +++....+.+.+++ +++++++++||++++|+|+++++.|.+|+.
T Consensus 231 ~~P~lii~G~~D~~-~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 231 KVPTLLTVGEFDTM-TPEAAREMQELIAG-SRLVVFPDGSHMTMIEDPEVYFKLLSDFIR 288 (288)
T ss_pred CCCEEEEecCCCcc-CHHHHHHHHHhccC-CeEEEeCCCCCCcccCCHHHHHHHHHHHhC
Confidence 89999999999985 56778888888886 699999999999999999999999999984
No 35
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.95 E-value=2.2e-27 Score=196.55 Aligned_cols=221 Identities=29% Similarity=0.420 Sum_probs=141.1
Q ss_pred EEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEEEEecc
Q 022534 38 IVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGF 117 (295)
Q Consensus 38 vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G~ 117 (295)
|||+||+++++..|..+++.|+ +||+|+++|+||||.|+.+.. ...++.+++++++.+++++++.+ +++++ ||
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~---~~~~~~~~~~~~l~~~l~~~~~~-~~~lv--G~ 73 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALA-RGYRVIAFDLPGHGRSDPPPD---YSPYSIEDYAEDLAELLDALGIK-KVILV--GH 73 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHH-TTSEEEEEECTTSTTSSSHSS---GSGGSHHHHHHHHHHHHHHTTTS-SEEEE--EE
T ss_pred eEEECCCCCCHHHHHHHHHHHh-CCCEEEEEecCCccccccccc---cCCcchhhhhhhhhhcccccccc-ccccc--cc
Confidence 7999999999999999999996 699999999999999997542 12457899999999999999886 47777 66
Q ss_pred cch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhh-----hHHHHHHHHHhCCCccccccccc
Q 022534 118 LVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQ-----NAIMAERFIEAGSPYVLKLDKAD 191 (295)
Q Consensus 118 ~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 191 (295)
|+| .+++.++.++|++|+++++++++......... ....+++...... .......+... ........
T Consensus 74 S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 146 (228)
T PF12697_consen 74 SMGGMIALRLAARYPDRVKGLVLLSPPPPLPDSPSR---SFGPSFIRRLLAWRSRSLRRLASRFFYRW----FDGDEPED 146 (228)
T ss_dssp THHHHHHHHHHHHSGGGEEEEEEESESSSHHHHHCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HTHHHHHH
T ss_pred ccccccccccccccccccccceeecccccccccccc---cccchhhhhhhhccccccccccccccccc----cccccccc
Confidence 665 56888889999999999999754431100000 0000000000000 00000000000 00000000
Q ss_pred cccccccccCCchhHHHHHHHh-cchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecC
Q 022534 192 VYRLPYLASSGPGFALLEAARK-VNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEG 270 (295)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~ 270 (295)
..+. ....+...... ....+....+ +.+++|+++++|++|.+++.+..+++.+..++ ++++++++
T Consensus 147 ~~~~-------~~~~~~~~~~~~~~~~~~~~~~------~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~ 212 (228)
T PF12697_consen 147 LIRS-------SRRALAEYLRSNLWQADLSEAL------PRIKVPVLVIHGEDDPIVPPESAEELADKLPN-AELVVIPG 212 (228)
T ss_dssp HHHH-------HHHHHHHHHHHHHHHHHHHHHH------HGSSSEEEEEEETTSSSSHHHHHHHHHHHSTT-EEEEEETT
T ss_pred cccc-------cccccccccccccccccccccc------cccCCCeEEeecCCCCCCCHHHHHHHHHHCCC-CEEEEECC
Confidence 0000 00011111110 0001111122 25689999999999999998888999888886 89999999
Q ss_pred CCCCCCCCChHHHHHH
Q 022534 271 AGHMPQEDWPEKVVDG 286 (295)
Q Consensus 271 ~gH~~~~e~p~~~~~~ 286 (295)
+||++++|+|++|+++
T Consensus 213 ~gH~~~~~~p~~~~~a 228 (228)
T PF12697_consen 213 AGHFLFLEQPDEVAEA 228 (228)
T ss_dssp SSSTHHHHSHHHHHHH
T ss_pred CCCccHHHCHHHHhcC
Confidence 9999999999999874
No 36
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.95 E-value=5.4e-26 Score=204.21 Aligned_cols=256 Identities=20% Similarity=0.307 Sum_probs=155.3
Q ss_pred eEEeCcEEEEEEEcCCC-CCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHH
Q 022534 15 YIKSGEYRWFVRETGSA-DSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEF 93 (295)
Q Consensus 15 ~~~~~~~~~~~~~~g~~-~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~ 93 (295)
|...++..+++..+.+. .+.+++|||+||++++...|..+++.|++.||+|+++|+||||+|++.. .+.++.+.+
T Consensus 115 ~~~~~~~~l~~~~~~p~~~~~~~~Vl~lHG~~~~~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~----~~~~~~~~~ 190 (395)
T PLN02652 115 FYGARRNALFCRSWAPAAGEMRGILIIIHGLNEHSGRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLH----GYVPSLDYV 190 (395)
T ss_pred EECCCCCEEEEEEecCCCCCCceEEEEECCchHHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC----CCCcCHHHH
Confidence 33445678888888763 3446799999999999999999999998889999999999999998753 223467888
Q ss_pred HHHHHHHHHHhCCC---CceEEEEecccchHH-HHHHHHhCcC---ccceeEEEcCCCCCCCCCchhhhhhhcccchhhh
Q 022534 94 HEELDKLLDVLEVK---YPFFLVVQGFLVGSY-GLTWALKNPS---RISKLAILNSPLTASSPLPGLFQQLRIPLLGEFT 166 (295)
Q Consensus 94 ~~~l~~~~~~l~~~---~~~~lv~~G~~~G~~-~~~~a~~~p~---~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~ 166 (295)
.+|+.++++.+..+ .+++++ |||+|++ ++. ++.+|+ +++++|+.+ |............. ..++...
T Consensus 191 ~~Dl~~~l~~l~~~~~~~~i~lv--GhSmGG~ial~-~a~~p~~~~~v~glVL~s-P~l~~~~~~~~~~~-~~~l~~~-- 263 (395)
T PLN02652 191 VEDTEAFLEKIRSENPGVPCFLF--GHSTGGAVVLK-AASYPSIEDKLEGIVLTS-PALRVKPAHPIVGA-VAPIFSL-- 263 (395)
T ss_pred HHHHHHHHHHHHHhCCCCCEEEE--EECHHHHHHHH-HHhccCcccccceEEEEC-cccccccchHHHHH-HHHHHHH--
Confidence 99999999987532 256676 7777754 444 445664 899998874 54322111111000 0000000
Q ss_pred hhhHHHHHHH-HHhCCCc--ccccccccc---ccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEE
Q 022534 167 AQNAIMAERF-IEAGSPY--VLKLDKADV---YRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAW 240 (295)
Q Consensus 167 ~~~~~~~~~~-~~~~~~~--~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~ 240 (295)
....+ +.....+ ......... +.-+................ .....+... ..++++|+|+++
T Consensus 264 -----~~p~~~~~~~~~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~-----~~~~~l~~~--L~~I~vPvLIi~ 331 (395)
T PLN02652 264 -----VAPRFQFKGANKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEIL-----RISSYLTRN--FKSVTVPFMVLH 331 (395)
T ss_pred -----hCCCCcccCcccccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHH-----HHHHHHHhh--cccCCCCEEEEE
Confidence 00000 0000000 000000000 00000000000000000000 000111111 237899999999
Q ss_pred eCCCCCCCcchHHHHHhcCCC-CeEEEEecCCCCCCCCC-ChHHHHHHHHHHHHh
Q 022534 241 GISDKYLPQSVAEEFQKGNPN-VVKLQMIEGAGHMPQED-WPEKVVDGLRYFFLN 293 (295)
Q Consensus 241 G~~D~~~~~~~~~~~~~~~~~-~~~~~~i~~~gH~~~~e-~p~~~~~~i~~fl~~ 293 (295)
|++|.+++++.+.++++..+. +++++++|+++|.++.| +|+++++.|.+||.+
T Consensus 332 G~~D~vvp~~~a~~l~~~~~~~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~ 386 (395)
T PLN02652 332 GTADRVTDPLASQDLYNEAASRHKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEK 386 (395)
T ss_pred eCCCCCCCHHHHHHHHHhcCCCCceEEEECCCeEEeccCCCHHHHHHHHHHHHHH
Confidence 999999999999988776543 46899999999998766 799999999999976
No 37
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.94 E-value=6.2e-26 Score=188.89 Aligned_cols=264 Identities=18% Similarity=0.256 Sum_probs=166.1
Q ss_pred ccceeeEEeCcEEEEEEEcCCCC--CCCceEEEEcCCCCCC-ccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCC
Q 022534 10 REYGSYIKSGEYRWFVRETGSAD--SRLGTIVFLHGAPSHS-YSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDF 86 (295)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~g~~~--~~~~~vv~lHG~~~~~-~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~ 86 (295)
.....+.+.+|..++.+.+-+.. .++..|+++||+++++ +.|..++..|+..||.|+++|++|||+|++......
T Consensus 27 ~~~~~~~n~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~yi~-- 104 (313)
T KOG1455|consen 27 YSESFFTNPRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHAYVP-- 104 (313)
T ss_pred eeeeeEEcCCCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCcccCC--
Confidence 34456667789999999986522 4567899999998865 788899999999999999999999999997654322
Q ss_pred CCCHHHHHHHHHHHHHHh-----CCCCceEEEEecccc-hHHHHHHHHhCcCccceeEEEcCCCCCCC-CC-chhhhhhh
Q 022534 87 DFTENEFHEELDKLLDVL-----EVKYPFFLVVQGFLV-GSYGLTWALKNPSRISKLAILNSPLTASS-PL-PGLFQQLR 158 (295)
Q Consensus 87 ~~~~~~~~~~l~~~~~~l-----~~~~~~~lv~~G~~~-G~~~~~~a~~~p~~v~~lil~~~p~~~~~-~~-~~~~~~~~ 158 (295)
+.+..++|+..+.+.+ +-+.|.+|. |+|| |++++.++.+.|+..+++|++ +|+.... .. |.......
T Consensus 105 --~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~--GeSMGGAV~Ll~~~k~p~~w~G~ilv-aPmc~i~~~~kp~p~v~~~ 179 (313)
T KOG1455|consen 105 --SFDLVVDDVISFFDSIKEREENKGLPRFLF--GESMGGAVALLIALKDPNFWDGAILV-APMCKISEDTKPHPPVISI 179 (313)
T ss_pred --cHHHHHHHHHHHHHHHhhccccCCCCeeee--ecCcchHHHHHHHhhCCcccccceee-ecccccCCccCCCcHHHHH
Confidence 4567788888887753 224577887 6766 578888889999999999987 5654321 11 11000000
Q ss_pred cccchhhhhhhHHHHHHHHHhCCCccccc-----cccccc-cccccccCCchhH-HHHHHHhcchhhhhHhhhcCcCCCC
Q 022534 159 IPLLGEFTAQNAIMAERFIEAGSPYVLKL-----DKADVY-RLPYLASSGPGFA-LLEAARKVNFKDISSRIGAGFSSGS 231 (295)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (295)
.+++..+. .+|.-.-.+-.... ..+... .-|+.....+... .++-++. ...+..+ .++
T Consensus 180 l~~l~~li-------P~wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~------~~~le~~--l~~ 244 (313)
T KOG1455|consen 180 LTLLSKLI-------PTWKIVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRV------TADLEKN--LNE 244 (313)
T ss_pred HHHHHHhC-------CceeecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHH------HHHHHHh--ccc
Confidence 01111000 00100000000000 000000 0111111222211 1111111 1111111 237
Q ss_pred CCCcEEEEEeCCCCCCCcchHHHHHhcCC-CCeEEEEecCCCCCCCC----CChHHHHHHHHHHHHhcC
Q 022534 232 WDKPVLVAWGISDKYLPQSVAEEFQKGNP-NVVKLQMIEGAGHMPQE----DWPEKVVDGLRYFFLNYT 295 (295)
Q Consensus 232 ~~~P~l~i~G~~D~~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~----e~p~~~~~~i~~fl~~~~ 295 (295)
+++|.+++||+.|.+++++.++.+++..+ .+++++++||..|..+. |+-+.+...|.+||.+++
T Consensus 245 vtvPflilHG~dD~VTDp~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r~ 313 (313)
T KOG1455|consen 245 VTVPFLILHGTDDKVTDPKVSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDERV 313 (313)
T ss_pred ccccEEEEecCCCcccCcHHHHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhcC
Confidence 79999999999999999999999987644 47899999999998763 456789999999998753
No 38
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.94 E-value=3e-25 Score=199.16 Aligned_cols=255 Identities=23% Similarity=0.317 Sum_probs=157.1
Q ss_pred ccceeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCC
Q 022534 10 REYGSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFT 89 (295)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~ 89 (295)
...+..+..++..++|...|+++ .++|||+||++++...|..+++.|.+ +|+|+++|+||||.|+.... .++
T Consensus 108 ~~~~~~~~~~~~~i~~~~~g~~~--~~~vl~~HG~~~~~~~~~~~~~~l~~-~~~v~~~d~~g~G~s~~~~~-----~~~ 179 (371)
T PRK14875 108 GPAPRKARIGGRTVRYLRLGEGD--GTPVVLIHGFGGDLNNWLFNHAALAA-GRPVIALDLPGHGASSKAVG-----AGS 179 (371)
T ss_pred cCCCCcceEcCcEEEEecccCCC--CCeEEEECCCCCccchHHHHHHHHhc-CCEEEEEcCCCCCCCCCCCC-----CCC
Confidence 44556777888889988877543 46999999999999999999999986 69999999999999975322 236
Q ss_pred HHHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhh
Q 022534 90 ENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQ 168 (295)
Q Consensus 90 ~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (295)
.+++++++.++++.++.++ ++++ |||+| .+++.+|.++|++++++++++++.............+.... ... ..
T Consensus 180 ~~~~~~~~~~~~~~~~~~~-~~lv--G~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~ 254 (371)
T PRK14875 180 LDELAAAVLAFLDALGIER-AHLV--GHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEINGDYIDGFVAAE-SRR-EL 254 (371)
T ss_pred HHHHHHHHHHHHHhcCCcc-EEEE--eechHHHHHHHHHHhCchheeEEEEECcCCcCcccchhHHHHhhccc-chh-HH
Confidence 7899999999999998764 6666 67766 46777888999999999988654322111111000000000 000 00
Q ss_pred hHHHHHHHHHhCCCccccccc-cccccccccccCCchhHHHHHHHhcch------hhhhHhhhcCcCCCCCCCcEEEEEe
Q 022534 169 NAIMAERFIEAGSPYVLKLDK-ADVYRLPYLASSGPGFALLEAARKVNF------KDISSRIGAGFSSGSWDKPVLVAWG 241 (295)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~P~l~i~G 241 (295)
...+ .... ..+....... ..... +....... ..........+ .+.... ..+++||+|+++|
T Consensus 255 ~~~~-~~~~--~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~------l~~i~~Pvlii~g 322 (371)
T PRK14875 255 KPVL-ELLF--ADPALVTRQMVEDLLK--YKRLDGVD-DALRALADALFAGGRQRVDLRDR------LASLAIPVLVIWG 322 (371)
T ss_pred HHHH-HHHh--cChhhCCHHHHHHHHH--HhccccHH-HHHHHHHHHhccCcccchhHHHH------HhcCCCCEEEEEE
Confidence 0000 0000 0000000000 00000 00000000 00000000000 011111 1257899999999
Q ss_pred CCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 242 ISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 242 ~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
++|.++++..++.+ ...+++.+++++||++++|+|+++++.|..|+.+
T Consensus 323 ~~D~~vp~~~~~~l----~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 323 EQDRIIPAAHAQGL----PDGVAVHVLPGAGHMPQMEAAADVNRLLAEFLGK 370 (371)
T ss_pred CCCCccCHHHHhhc----cCCCeEEEeCCCCCChhhhCHHHHHHHHHHHhcc
Confidence 99999987655433 2347999999999999999999999999999864
No 39
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.94 E-value=5.1e-25 Score=184.97 Aligned_cols=240 Identities=25% Similarity=0.379 Sum_probs=143.0
Q ss_pred ceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHH-HHHHHHHhCCCCceEEEE
Q 022534 36 GTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEE-LDKLLDVLEVKYPFFLVV 114 (295)
Q Consensus 36 ~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~-l~~~~~~l~~~~~~~lv~ 114 (295)
|+|||+||++++...|..+++.|+ .+|+|+++|+||||.|+.+... ..++.++++++ +..+++.++.+ +++++
T Consensus 2 ~~vv~~hG~~~~~~~~~~~~~~L~-~~~~v~~~d~~g~G~s~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~~l~- 75 (251)
T TIGR03695 2 PVLVFLHGFLGSGADWQALIELLG-PHFRCLAIDLPGHGSSQSPDEI---ERYDFEEAAQDILATLLDQLGIE-PFFLV- 75 (251)
T ss_pred CEEEEEcCCCCchhhHHHHHHHhc-ccCeEEEEcCCCCCCCCCCCcc---ChhhHHHHHHHHHHHHHHHcCCC-eEEEE-
Confidence 689999999999999999999998 5899999999999999875321 24467788888 78888888765 46666
Q ss_pred ecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcc-cchhhhhh-hHHHHHHHHHhC-CCc--ccccc
Q 022534 115 QGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIP-LLGEFTAQ-NAIMAERFIEAG-SPY--VLKLD 188 (295)
Q Consensus 115 ~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~-~~~--~~~~~ 188 (295)
|||+| .+++.+|.++|++|++++++++.................. +...+... .......+.... ... .+...
T Consensus 76 -G~S~Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (251)
T TIGR03695 76 -GYSMGGRIALYYALQYPERVQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEGLEAFLDDWYQQPLFASQKNLPPE 154 (251)
T ss_pred -EeccHHHHHHHHHHhCchheeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcCccHHHHHHhcCceeeecccCChH
Confidence 67765 5788889999999999998864322111000000000000 00000000 000001111000 000 00000
Q ss_pred ccccccccccccCCchhHHHHHHHhcc---hhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEE
Q 022534 189 KADVYRLPYLASSGPGFALLEAARKVN---FKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKL 265 (295)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~ 265 (295)
....+...... ..+ ..+........ ..+....+ ..+++|+++|+|++|..++ ...+.+.+..++ +++
T Consensus 155 ~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~------~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~~~-~~~ 224 (251)
T TIGR03695 155 QRQALRAKRLA-NNP-EGLAKMLRATGLGKQPSLWPKL------QALTIPVLYLCGEKDEKFV-QIAKEMQKLLPN-LTL 224 (251)
T ss_pred HhHHHHHhccc-ccc-hHHHHHHHHhhhhcccchHHHh------hCCCCceEEEeeCcchHHH-HHHHHHHhcCCC-CcE
Confidence 00000000000 000 00111111000 00111111 2678999999999998763 566778888886 799
Q ss_pred EEecCCCCCCCCCChHHHHHHHHHHHH
Q 022534 266 QMIEGAGHMPQEDWPEKVVDGLRYFFL 292 (295)
Q Consensus 266 ~~i~~~gH~~~~e~p~~~~~~i~~fl~ 292 (295)
+++|++||++++|+|+++++.|..|+.
T Consensus 225 ~~~~~~gH~~~~e~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 225 VIIANAGHNIHLENPEAFAKILLAFLE 251 (251)
T ss_pred EEEcCCCCCcCccChHHHHHHHHHHhC
Confidence 999999999999999999999999973
No 40
>PRK05855 short chain dehydrogenase; Validated
Probab=99.93 E-value=5e-25 Score=208.86 Aligned_cols=260 Identities=19% Similarity=0.269 Sum_probs=155.9
Q ss_pred eeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHH
Q 022534 13 GSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENE 92 (295)
Q Consensus 13 ~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~ 92 (295)
..++..+|.+++|...|+++ +|+|||+||+++++..|..+++.|+ .+|+|+++|+||||+|+++... ..|+.++
T Consensus 5 ~~~~~~~g~~l~~~~~g~~~--~~~ivllHG~~~~~~~w~~~~~~L~-~~~~Vi~~D~~G~G~S~~~~~~---~~~~~~~ 78 (582)
T PRK05855 5 RTVVSSDGVRLAVYEWGDPD--RPTVVLVHGYPDNHEVWDGVAPLLA-DRFRVVAYDVRGAGRSSAPKRT---AAYTLAR 78 (582)
T ss_pred EEEEeeCCEEEEEEEcCCCC--CCeEEEEcCCCchHHHHHHHHHHhh-cceEEEEecCCCCCCCCCCCcc---cccCHHH
Confidence 45677899999999988643 4799999999999999999999996 5899999999999999975432 2568899
Q ss_pred HHHHHHHHHHHhCCCCceEEEEecccchHH-HHHHHHh--CcCccceeEEEcCCCCCCCCCchhhhhhhc-ccchh-hhh
Q 022534 93 FHEELDKLLDVLEVKYPFFLVVQGFLVGSY-GLTWALK--NPSRISKLAILNSPLTASSPLPGLFQQLRI-PLLGE-FTA 167 (295)
Q Consensus 93 ~~~~l~~~~~~l~~~~~~~lv~~G~~~G~~-~~~~a~~--~p~~v~~lil~~~p~~~~~~~~~~~~~~~~-~~~~~-~~~ 167 (295)
+++|+.+++++++.++|++|+ |||+|++ ++.++.. .|+++..++.+++|.... ...+..... ..... ...
T Consensus 79 ~a~dl~~~i~~l~~~~~~~lv--GhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 153 (582)
T PRK05855 79 LADDFAAVIDAVSPDRPVHLL--AHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSLDH---VGFWLRSGLRRPTPRRLAR 153 (582)
T ss_pred HHHHHHHHHHHhCCCCcEEEE--ecChHHHHHHHHHhCccchhhhhhheeccCCchHH---HHHHHhhcccccchhhhhH
Confidence 999999999999887778787 7777764 4444443 345555555554432110 000000000 00000 000
Q ss_pred hhHHHHHHHHHh--CCCc---c-----cccccccccc----ccc---c-----ccCCchhHHHHHHHhcchhhhhHhhhc
Q 022534 168 QNAIMAERFIEA--GSPY---V-----LKLDKADVYR----LPY---L-----ASSGPGFALLEAARKVNFKDISSRIGA 225 (295)
Q Consensus 168 ~~~~~~~~~~~~--~~~~---~-----~~~~~~~~~~----~~~---~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (295)
........+... ..+. . .......... .+. . .....+.... ... .......
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~----~~~~~~~ 226 (582)
T PRK05855 154 ALGQLLRSWYIYLFHLPVLPELLWRLGLGRAWPRLLRRVEGTPVDPIPTQTTLSDGAHGVKLY---RAN----MIRSLSR 226 (582)
T ss_pred HHHHHhhhHHHHHHhCCCCcHHHhccchhhHHHHhhhhccCCCcchhhhhhhhccccchHHHH---Hhh----hhhhhcc
Confidence 000000000000 0000 0 0000000000 000 0 0000000000 000 0000000
Q ss_pred CcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 226 GFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 226 ~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
-....+++|+|+|+|++|++++++....+++..++ .++++++ +||+++.|+|++++++|.+|+..
T Consensus 227 -~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~~~~-~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~~ 291 (582)
T PRK05855 227 -PRERYTDVPVQLIVPTGDPYVRPALYDDLSRWVPR-LWRREIK-AGHWLPMSHPQVLAAAVAEFVDA 291 (582)
T ss_pred -CccCCccCceEEEEeCCCcccCHHHhccccccCCc-ceEEEcc-CCCcchhhChhHHHHHHHHHHHh
Confidence 01225789999999999999999888888888876 6888886 79999999999999999999975
No 41
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.93 E-value=1.6e-24 Score=223.30 Aligned_cols=261 Identities=17% Similarity=0.232 Sum_probs=156.4
Q ss_pred EEeCcE--EEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCC---CCCCCCCH
Q 022534 16 IKSGEY--RWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKG---YDDFDFTE 90 (295)
Q Consensus 16 ~~~~~~--~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~---~~~~~~~~ 90 (295)
++.++. -++|++.|+.+ .+++|||+||+++++..|..+++.|.+ +|+|+++|+||||.|+.+... .....|++
T Consensus 1351 v~~~~~~~~i~~~~~G~~~-~~~~vVllHG~~~s~~~w~~~~~~L~~-~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si 1428 (1655)
T PLN02980 1351 VDVDGFSCLIKVHEVGQNA-EGSVVLFLHGFLGTGEDWIPIMKAISG-SARCISIDLPGHGGSKIQNHAKETQTEPTLSV 1428 (1655)
T ss_pred EccCceEEEEEEEecCCCC-CCCeEEEECCCCCCHHHHHHHHHHHhC-CCEEEEEcCCCCCCCCCccccccccccccCCH
Confidence 444443 35556666532 246999999999999999999999986 699999999999999864310 01235688
Q ss_pred HHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccc---hhhh
Q 022534 91 NEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLL---GEFT 166 (295)
Q Consensus 91 ~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~---~~~~ 166 (295)
+++++++.+++++++.++ ++++ |||+| .+++.+|.++|++|++++++++....... .....+.... ....
T Consensus 1429 ~~~a~~l~~ll~~l~~~~-v~Lv--GhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~---~~~~~~~~~~~~~~~~l 1502 (1655)
T PLN02980 1429 ELVADLLYKLIEHITPGK-VTLV--GYSMGARIALYMALRFSDKIEGAVIISGSPGLKDE---VARKIRSAKDDSRARML 1502 (1655)
T ss_pred HHHHHHHHHHHHHhCCCC-EEEE--EECHHHHHHHHHHHhChHhhCEEEEECCCCccCch---HHHHHHhhhhhHHHHHH
Confidence 999999999999998775 6676 77776 56888999999999999998643221110 0011100000 0000
Q ss_pred hh--hHHHHHHHHHhCC-Ccccc-ccccccccccccccCCchhHHHHHHHhcc---hhhhhHhhhcCcCCCCCCCcEEEE
Q 022534 167 AQ--NAIMAERFIEAGS-PYVLK-LDKADVYRLPYLASSGPGFALLEAARKVN---FKDISSRIGAGFSSGSWDKPVLVA 239 (295)
Q Consensus 167 ~~--~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~P~l~i 239 (295)
.. ...+...|..... ..... .......+.... .... ..+........ ..+.... ..++++|+|+|
T Consensus 1503 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~l~~~~~~~~~dl~~~------L~~I~~PtLlI 1574 (1655)
T PLN02980 1503 IDHGLEIFLENWYSGELWKSLRNHPHFNKIVASRLL-HKDV-PSLAKLLSDLSIGRQPSLWED------LKQCDTPLLLV 1574 (1655)
T ss_pred HhhhHHHHHHHhccHHHhhhhccCHHHHHHHHHHHh-cCCH-HHHHHHHHHhhhcccchHHHH------HhhCCCCEEEE
Confidence 00 0001111111000 00000 000000000000 0000 00000000000 0011111 13678999999
Q ss_pred EeCCCCCCCcchHHHHHhcCCCC-----------eEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 240 WGISDKYLPQSVAEEFQKGNPNV-----------VKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 240 ~G~~D~~~~~~~~~~~~~~~~~~-----------~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
+|++|.+++ +.+.++.+.+++. ++++++|+|||++++|+|++|++.|++||.+
T Consensus 1575 ~Ge~D~~~~-~~a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I~~FL~~ 1638 (1655)
T PLN02980 1575 VGEKDVKFK-QIAQKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRALRKFLTR 1638 (1655)
T ss_pred EECCCCccH-HHHHHHHHHccccccccccccccceEEEEECCCCCchHHHCHHHHHHHHHHHHHh
Confidence 999999774 5667777776641 4899999999999999999999999999975
No 42
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.93 E-value=9.3e-24 Score=184.84 Aligned_cols=122 Identities=20% Similarity=0.311 Sum_probs=93.7
Q ss_pred eeEEe-CcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHH
Q 022534 14 SYIKS-GEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENE 92 (295)
Q Consensus 14 ~~~~~-~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~ 92 (295)
.+++. +|.+++|.+.|+++ .++|||+||++++...| .+...+...+|+|+++|+||||+|+.+... +.++.++
T Consensus 7 ~~~~~~~~~~l~y~~~g~~~--~~~lvllHG~~~~~~~~-~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~---~~~~~~~ 80 (306)
T TIGR01249 7 GYLNVSDNHQLYYEQSGNPD--GKPVVFLHGGPGSGTDP-GCRRFFDPETYRIVLFDQRGCGKSTPHACL---EENTTWD 80 (306)
T ss_pred CeEEcCCCcEEEEEECcCCC--CCEEEEECCCCCCCCCH-HHHhccCccCCEEEEECCCCCCCCCCCCCc---ccCCHHH
Confidence 44444 67999999988543 35899999998776554 444555445899999999999999865422 2457789
Q ss_pred HHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCC
Q 022534 93 FHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPL 144 (295)
Q Consensus 93 ~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~ 144 (295)
+++++..+++++++++ ++++ |||+| .+++.++.++|++|+++|++++..
T Consensus 81 ~~~dl~~l~~~l~~~~-~~lv--G~S~GG~ia~~~a~~~p~~v~~lvl~~~~~ 130 (306)
T TIGR01249 81 LVADIEKLREKLGIKN-WLVF--GGSWGSTLALAYAQTHPEVVTGLVLRGIFL 130 (306)
T ss_pred HHHHHHHHHHHcCCCC-EEEE--EECHHHHHHHHHHHHChHhhhhheeecccc
Confidence 9999999999998875 5666 67765 578889999999999999986543
No 43
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.93 E-value=2.9e-24 Score=189.76 Aligned_cols=258 Identities=17% Similarity=0.211 Sum_probs=152.1
Q ss_pred eEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCcc----------------------c----hhhHHHhhhCCCeEEEe
Q 022534 15 YIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYS----------------------Y----RNVMSQMSDAGFHCFAP 68 (295)
Q Consensus 15 ~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~----------------------w----~~~~~~l~~~~~~via~ 68 (295)
|.+.+|..+++..+.+. +++++|+++||+++++.. | ..+++.|.++||+|+++
T Consensus 2 ~~~~~g~~l~~~~~~~~-~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~ 80 (332)
T TIGR01607 2 FRNKDGLLLKTYSWIVK-NAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGL 80 (332)
T ss_pred ccCCCCCeEEEeeeecc-CCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEe
Confidence 44557888988887654 457899999999999861 1 46789998889999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-----------------------CCceEEEEecccchH-HHH
Q 022534 69 DWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEV-----------------------KYPFFLVVQGFLVGS-YGL 124 (295)
Q Consensus 69 Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~-----------------------~~~~~lv~~G~~~G~-~~~ 124 (295)
|+||||+|+...... .+-.+.+++++|+.++++.+.. +.|++++ |||+|+ +++
T Consensus 81 D~rGHG~S~~~~~~~-g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~--GhSmGg~i~~ 157 (332)
T TIGR01607 81 DLQGHGESDGLQNLR-GHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYII--GLSMGGNIAL 157 (332)
T ss_pred cccccCCCccccccc-cchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEe--eccCccHHHH
Confidence 999999998642211 1112568899999999887521 3567777 777765 667
Q ss_pred HHHHhCcC--------ccceeEEEcCCCCCCCCC-c--hhhhhhhcccchhhhhhhHHHHHHHHHhC----------CCc
Q 022534 125 TWALKNPS--------RISKLAILNSPLTASSPL-P--GLFQQLRIPLLGEFTAQNAIMAERFIEAG----------SPY 183 (295)
Q Consensus 125 ~~a~~~p~--------~v~~lil~~~p~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~ 183 (295)
.++.++++ .++++|++++++...... + ........+++.. ..++.+.. .+.
T Consensus 158 ~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~--------~~~~~p~~~~~~~~~~~~~~~ 229 (332)
T TIGR01607 158 RLLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNF--------MSRVFPTFRISKKIRYEKSPY 229 (332)
T ss_pred HHHHHhccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHH--------HHHHCCcccccCccccccChh
Confidence 77665542 588888775443211100 0 0000000001000 00111100 000
Q ss_pred cccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCC-CC
Q 022534 184 VLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNP-NV 262 (295)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~-~~ 262 (295)
.......+.+ .........+...+... ...+.........++|+|+|+|++|.+++++.+..+++... .+
T Consensus 230 ~~~~~~~Dp~----~~~~~~s~~~~~~l~~~-----~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~ 300 (332)
T TIGR01607 230 VNDIIKFDKF----RYDGGITFNLASELIKA-----TDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSISN 300 (332)
T ss_pred hhhHHhcCcc----ccCCcccHHHHHHHHHH-----HHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCCC
Confidence 0000111111 11011111111111100 01111111101227999999999999999988888876543 24
Q ss_pred eEEEEecCCCCCCCCCC-hHHHHHHHHHHHHh
Q 022534 263 VKLQMIEGAGHMPQEDW-PEKVVDGLRYFFLN 293 (295)
Q Consensus 263 ~~~~~i~~~gH~~~~e~-p~~~~~~i~~fl~~ 293 (295)
++++++++++|.++.|. ++++.+.|.+||.+
T Consensus 301 ~~l~~~~g~~H~i~~E~~~~~v~~~i~~wL~~ 332 (332)
T TIGR01607 301 KELHTLEDMDHVITIEPGNEEVLKKIIEWISN 332 (332)
T ss_pred cEEEEECCCCCCCccCCCHHHHHHHHHHHhhC
Confidence 79999999999998885 79999999999864
No 44
>PLN02511 hydrolase
Probab=99.90 E-value=4.8e-23 Score=185.53 Aligned_cols=242 Identities=17% Similarity=0.186 Sum_probs=136.9
Q ss_pred CCceEEEEcCCCCCCcc-c-hhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC---C
Q 022534 34 RLGTIVFLHGAPSHSYS-Y-RNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVK---Y 108 (295)
Q Consensus 34 ~~~~vv~lHG~~~~~~~-w-~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~---~ 108 (295)
.+|+||++||+++++.. | ..++..+.+.||+|+++|+||||.|..+.+.. ....+++|+.++++.+... .
T Consensus 99 ~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~~~~-----~~~~~~~Dl~~~i~~l~~~~~~~ 173 (388)
T PLN02511 99 DAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTTPQF-----YSASFTGDLRQVVDHVAGRYPSA 173 (388)
T ss_pred CCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCCcCE-----EcCCchHHHHHHHHHHHHHCCCC
Confidence 35789999999877654 5 45666665679999999999999998643221 1245678888888887652 3
Q ss_pred ceEEEEecccch-HHHHHHHHhCcCc--cceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhh--HHHH--HHHHHhCC
Q 022534 109 PFFLVVQGFLVG-SYGLTWALKNPSR--ISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQN--AIMA--ERFIEAGS 181 (295)
Q Consensus 109 ~~~lv~~G~~~G-~~~~~~a~~~p~~--v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--~~~~~~~~ 181 (295)
+++++ |+|+| .+++.++.++|++ |++++++++|...... ...+............... .... ...+....
T Consensus 174 ~~~lv--G~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~-~~~~~~~~~~~y~~~~~~~l~~~~~~~~~~~~~~~ 250 (388)
T PLN02511 174 NLYAA--GWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIA-DEDFHKGFNNVYDKALAKALRKIFAKHALLFEGLG 250 (388)
T ss_pred CEEEE--EechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHH-HHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 56776 77766 5778889999987 8888888776642100 0000000000000000000 0000 00000000
Q ss_pred CccccccccccccccccccCCchhHHHHHHHh--cchhhhh---HhhhcCcCCCCCCCcEEEEEeCCCCCCCcchH-HHH
Q 022534 182 PYVLKLDKADVYRLPYLASSGPGFALLEAARK--VNFKDIS---SRIGAGFSSGSWDKPVLVAWGISDKYLPQSVA-EEF 255 (295)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~---~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~-~~~ 255 (295)
.. .... ...+ ...-..+.+.... ..+.... .+.......+++++|+|+|+|++|++++.+.. ...
T Consensus 251 ~~-~~~~--~~~~------~~~~~~fd~~~t~~~~gf~~~~~yy~~~s~~~~L~~I~vPtLiI~g~dDpi~p~~~~~~~~ 321 (388)
T PLN02511 251 GE-YNIP--LVAN------AKTVRDFDDGLTRVSFGFKSVDAYYSNSSSSDSIKHVRVPLLCIQAANDPIAPARGIPRED 321 (388)
T ss_pred Cc-cCHH--HHHh------CCCHHHHHHhhhhhcCCCCCHHHHHHHcCchhhhccCCCCeEEEEcCCCCcCCcccCcHhH
Confidence 00 0000 0000 0000000000000 0011000 00000011236899999999999999987654 445
Q ss_pred HhcCCCCeEEEEecCCCCCCCCCChHH------HHHHHHHHHHh
Q 022534 256 QKGNPNVVKLQMIEGAGHMPQEDWPEK------VVDGLRYFFLN 293 (295)
Q Consensus 256 ~~~~~~~~~~~~i~~~gH~~~~e~p~~------~~~~i~~fl~~ 293 (295)
.+..++ +++++++++||+.++|+|+. +.+.+.+||..
T Consensus 322 ~~~~p~-~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~ 364 (388)
T PLN02511 322 IKANPN-CLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEA 364 (388)
T ss_pred HhcCCC-EEEEECCCcceeccccCCCCCCCCccHHHHHHHHHHH
Confidence 667786 79999999999999999987 48999999865
No 45
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.89 E-value=1.2e-22 Score=158.96 Aligned_cols=254 Identities=15% Similarity=0.165 Sum_probs=164.5
Q ss_pred ccccceeeEEeCcEEEEEEEcCCCCCCCceEEEEcCC-CCCCccchhhHHHhhhC-CCeEEEeCCCCCCCCCCCCCCCCC
Q 022534 8 KGREYGSYIKSGEYRWFVRETGSADSRLGTIVFLHGA-PSHSYSYRNVMSQMSDA-GFHCFAPDWLGFGFSDKPEKGYDD 85 (295)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~-~~~~~~w~~~~~~l~~~-~~~via~Dl~G~G~S~~~~~~~~~ 85 (295)
.+.++..-+.+||..++|+++|.+++ -|+++-|. ++.+..|..++..|... -++++++|-||||.|..|+... .
T Consensus 18 ~~~~te~kv~vng~ql~y~~~G~G~~---~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf-~ 93 (277)
T KOG2984|consen 18 QSDYTESKVHVNGTQLGYCKYGHGPN---YILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKF-E 93 (277)
T ss_pred cchhhhheeeecCceeeeeecCCCCc---eeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccc-h
Confidence 34567778899999999999998765 68889996 56777899998887543 3899999999999999876533 2
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCceEEEEecccchHH-HHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchh
Q 022534 86 FDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSY-GLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGE 164 (295)
Q Consensus 86 ~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G~~-~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~ 164 (295)
.++- ..=+++..+++++|..++ +.++ |||-|++ ++..|+++++.|.+++++++.......-.-.+.-++
T Consensus 94 ~~ff-~~Da~~avdLM~aLk~~~-fsvl--GWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ma~kgiR------ 163 (277)
T KOG2984|consen 94 VQFF-MKDAEYAVDLMEALKLEP-FSVL--GWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAMAFKGIR------ 163 (277)
T ss_pred HHHH-HHhHHHHHHHHHHhCCCC-eeEe--eecCCCeEEEEeeccChhhhhhheeecccceecchhHHHHhchH------
Confidence 2211 122566778889998874 6665 9986654 567789999999999999764432211000000000
Q ss_pred hhhhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhH-hhhcCcCCCCCCCcEEEEEeCC
Q 022534 165 FTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISS-RIGAGFSSGSWDKPVLVAWGIS 243 (295)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~l~i~G~~ 243 (295)
-...|.+.+.+-.. +.|...+... .=..+++.+.+. .+..+ ++ .+....+++||+|+++|++
T Consensus 164 -------dv~kWs~r~R~P~e-----~~Yg~e~f~~--~wa~wvD~v~qf--~~~~dG~f-Cr~~lp~vkcPtli~hG~k 226 (277)
T KOG2984|consen 164 -------DVNKWSARGRQPYE-----DHYGPETFRT--QWAAWVDVVDQF--HSFCDGRF-CRLVLPQVKCPTLIMHGGK 226 (277)
T ss_pred -------HHhhhhhhhcchHH-----HhcCHHHHHH--HHHHHHHHHHHH--hhcCCCch-HhhhcccccCCeeEeeCCc
Confidence 00112211100000 0000000000 000122221110 00000 00 1111347899999999999
Q ss_pred CCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 244 DKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 244 D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
|+.++...+-.+.++.+. +++.+.|..+|..++-.+++|+..+.+||..
T Consensus 227 Dp~~~~~hv~fi~~~~~~-a~~~~~peGkHn~hLrya~eFnklv~dFl~~ 275 (277)
T KOG2984|consen 227 DPFCGDPHVCFIPVLKSL-AKVEIHPEGKHNFHLRYAKEFNKLVLDFLKS 275 (277)
T ss_pred CCCCCCCCccchhhhccc-ceEEEccCCCcceeeechHHHHHHHHHHHhc
Confidence 999988888888888886 7999999999999999999999999999964
No 46
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.88 E-value=2.7e-21 Score=173.22 Aligned_cols=266 Identities=14% Similarity=0.134 Sum_probs=155.4
Q ss_pred cEEEEEEEcCCCC-CCCceEEEEcCCCCCC-------------ccchhhHHH---hhhCCCeEEEeCCCCCCCCCCC---
Q 022534 20 EYRWFVRETGSAD-SRLGTIVFLHGAPSHS-------------YSYRNVMSQ---MSDAGFHCFAPDWLGFGFSDKP--- 79 (295)
Q Consensus 20 ~~~~~~~~~g~~~-~~~~~vv~lHG~~~~~-------------~~w~~~~~~---l~~~~~~via~Dl~G~G~S~~~--- 79 (295)
..++.|+.+|..+ ...++||+.|++++++ ..|..++-. |....|-||++|..|-|.|+.|
T Consensus 40 ~~~~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g 119 (389)
T PRK06765 40 DVQMGYETYGTLNRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVI 119 (389)
T ss_pred CceEEEEeccccCCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCC
Confidence 4889999999633 2246899999998754 237666643 5455799999999998864322
Q ss_pred ----C---C--C--C--CCCCCCHHHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCC
Q 022534 80 ----E---K--G--Y--DDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLT 145 (295)
Q Consensus 80 ----~---~--~--~--~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~ 145 (295)
. + + + +-..|+++++++++..+++++++++...++ |||+| +.++.+|.++|++|+++|++++...
T Consensus 120 ~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi~~~~~vv--G~SmGG~ial~~a~~~P~~v~~lv~ia~~~~ 197 (389)
T PRK06765 120 TTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGIARLHAVM--GPSMGGMQAQEWAVHYPHMVERMIGVIGNPQ 197 (389)
T ss_pred CCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCCCCceEEE--EECHHHHHHHHHHHHChHhhheEEEEecCCC
Confidence 1 0 0 0 012478999999999999999998754355 66765 5789999999999999999866443
Q ss_pred CCCCC-chhhhhhhcccc-------hhhh----hhhHHH-----------HHHHHHhCCCccccccccc-----------
Q 022534 146 ASSPL-PGLFQQLRIPLL-------GEFT----AQNAIM-----------AERFIEAGSPYVLKLDKAD----------- 191 (295)
Q Consensus 146 ~~~~~-~~~~~~~~~~~~-------~~~~----~~~~~~-----------~~~~~~~~~~~~~~~~~~~----------- 191 (295)
..... .......+..+. +.+. ...... ...++..............
T Consensus 198 ~~~~~~~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~~~~~~~~e 277 (389)
T PRK06765 198 NDAWTSVNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDPYEKVSTLTSFE 277 (389)
T ss_pred CChhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccccccccccccchhhHH
Confidence 22111 111110000000 0000 000000 0111110000000000000
Q ss_pred cc-cc---cccccCCch-hH-HHHHHHhcchh----hhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCC
Q 022534 192 VY-RL---PYLASSGPG-FA-LLEAARKVNFK----DISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPN 261 (295)
Q Consensus 192 ~~-~~---~~~~~~~~~-~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~ 261 (295)
.+ .. .+....++. +. +.......+.. +.... ..++++|+|+|+|++|.++|++.++++.+.+++
T Consensus 278 ~yl~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~------L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~ 351 (389)
T PRK06765 278 KEINKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEA------LSNIEANVLMIPCKQDLLQPPRYNYKMVDILQK 351 (389)
T ss_pred HHHHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHH------HhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhhh
Confidence 00 00 000000000 00 00000000000 01111 126799999999999999999998889888862
Q ss_pred ---CeEEEEecC-CCCCCCCCChHHHHHHHHHHHHh
Q 022534 262 ---VVKLQMIEG-AGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 262 ---~~~~~~i~~-~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
+++++++++ +||++++|+|++|++.|++||.+
T Consensus 352 ~~~~a~l~~I~s~~GH~~~le~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 352 QGKYAEVYEIESINGHMAGVFDIHLFEKKIYEFLNR 387 (389)
T ss_pred cCCCeEEEEECCCCCcchhhcCHHHHHHHHHHHHcc
Confidence 479999996 99999999999999999999964
No 47
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.86 E-value=2.3e-20 Score=158.09 Aligned_cols=237 Identities=21% Similarity=0.341 Sum_probs=148.5
Q ss_pred CCceEEEEcCCCCCCccchhhHHHhhhC-CCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC---CCCc
Q 022534 34 RLGTIVFLHGAPSHSYSYRNVMSQMSDA-GFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLE---VKYP 109 (295)
Q Consensus 34 ~~~~vv~lHG~~~~~~~w~~~~~~l~~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~---~~~~ 109 (295)
..||++++||+-++...|.-+...|+.. +.+|++.|+|-||.|.+.... +...+++|+..|++..+ ...+
T Consensus 51 ~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~h------~~~~ma~dv~~Fi~~v~~~~~~~~ 124 (315)
T KOG2382|consen 51 RAPPAIILHGLLGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKITVH------NYEAMAEDVKLFIDGVGGSTRLDP 124 (315)
T ss_pred CCCceEEecccccCCCCHHHHHHHhcccccCceEEEecccCCCCcccccc------CHHHHHHHHHHHHHHcccccccCC
Confidence 4689999999999999999999999743 679999999999999975432 23689999999999874 2334
Q ss_pred eEEEEecccchH--HHHHHHHhCcCccceeEEEcCCCCCCCCCch----hhhhhh-cccc----h-------hhhhh-hH
Q 022534 110 FFLVVQGFLVGS--YGLTWALKNPSRISKLAILNSPLTASSPLPG----LFQQLR-IPLL----G-------EFTAQ-NA 170 (295)
Q Consensus 110 ~~lv~~G~~~G~--~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~----~~~~~~-~~~~----~-------~~~~~-~~ 170 (295)
+.++ |||+|+ .++..+.++|+++..+++.+.+........+ .+.+++ .+.. . .+... ..
T Consensus 125 ~~l~--GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~~~~rke~~~~l~~~~~d 202 (315)
T KOG2382|consen 125 VVLL--GHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGVSRGRKEALKSLIEVGFD 202 (315)
T ss_pred ceec--ccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHHHHHHhccccccccccHHHHHHHHHHHhcc
Confidence 5565 777765 4556678999999999988643322111111 111111 1100 0 00000 00
Q ss_pred HHHHHHHHhCCCccccccccc-cccccccccCCch-hHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCC
Q 022534 171 IMAERFIEAGSPYVLKLDKAD-VYRLPYLASSGPG-FALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLP 248 (295)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~ 248 (295)
....+|+...... +..... .++.+. .+ ..++..+....+. .......+..|||++.|.++..++
T Consensus 203 ~~~~~fi~~nl~~--~~~~~s~~w~~nl-----~~i~~~~~~~~~~s~~-------~~l~~~~~~~pvlfi~g~~S~fv~ 268 (315)
T KOG2382|consen 203 NLVRQFILTNLKK--SPSDGSFLWRVNL-----DSIASLLDEYEILSYW-------ADLEDGPYTGPVLFIKGLQSKFVP 268 (315)
T ss_pred hHHHHHHHHhcCc--CCCCCceEEEeCH-----HHHHHHHHHHHhhccc-------ccccccccccceeEEecCCCCCcC
Confidence 0011222111000 000000 000000 00 0111111101100 111113678999999999999999
Q ss_pred cchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 249 QSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
.+.-.++.+.+|+ ++++++++|||++|.|+|++|++.|.+|+..
T Consensus 269 ~~~~~~~~~~fp~-~e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~~ 312 (315)
T KOG2382|consen 269 DEHYPRMEKIFPN-VEVHELDEAGHWVHLEKPEEFIESISEFLEE 312 (315)
T ss_pred hhHHHHHHHhccc-hheeecccCCceeecCCHHHHHHHHHHHhcc
Confidence 9888999999998 7999999999999999999999999999864
No 48
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.84 E-value=1.9e-19 Score=155.06 Aligned_cols=227 Identities=17% Similarity=0.253 Sum_probs=121.9
Q ss_pred CceEEEEcCCCC----CCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-----C
Q 022534 35 LGTIVFLHGAPS----HSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVL-----E 105 (295)
Q Consensus 35 ~~~vv~lHG~~~----~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l-----~ 105 (295)
+++||++||++. ++..|..+++.|+++||+|+++|+||||.|+... ++.+++..|+.++++.+ +
T Consensus 26 ~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~-------~~~~~~~~d~~~~~~~l~~~~~g 98 (274)
T TIGR03100 26 TTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGEN-------LGFEGIDADIAAAIDAFREAAPH 98 (274)
T ss_pred CCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC-------CCHHHHHHHHHHHHHHHHhhCCC
Confidence 457888888764 3334667788998889999999999999997532 13456777788777776 3
Q ss_pred CCCceEEEEecccchHH-HHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHHhCCCcc
Q 022534 106 VKYPFFLVVQGFLVGSY-GLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYV 184 (295)
Q Consensus 106 ~~~~~~lv~~G~~~G~~-~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (295)
.++ ++++ |||+|++ ++.+|. .+++|+++|+++++.......... ..+.-...... ......+... + .+-
T Consensus 99 ~~~-i~l~--G~S~Gg~~a~~~a~-~~~~v~~lil~~p~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~~-g-~~~ 168 (274)
T TIGR03100 99 LRR-IVAW--GLCDAASAALLYAP-ADLRVAGLVLLNPWVRTEAAQAAS--RIRHYYLGQLL--SADFWRKLLS-G-EVN 168 (274)
T ss_pred CCc-EEEE--EECHHHHHHHHHhh-hCCCccEEEEECCccCCcccchHH--HHHHHHHHHHh--ChHHHHHhcC-C-Ccc
Confidence 443 5565 7777754 455544 456899999986443211110100 00000000000 0000001100 0 000
Q ss_pred cccccccccc-cc-ccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchH------HHHH
Q 022534 185 LKLDKADVYR-LP-YLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVA------EEFQ 256 (295)
Q Consensus 185 ~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~------~~~~ 256 (295)
.....+.... .. ... .......... -++....+ .++++|+++++|++|+..+ ... .+..
T Consensus 169 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~-----~~~~~~~l------~~~~~P~ll~~g~~D~~~~-~~~~~~~~~~~~~ 235 (274)
T TIGR03100 169 LGSSLRGLGDALLKARQ-KGDEVAHGGL-----AERMKAGL------ERFQGPVLFILSGNDLTAQ-EFADSVLGEPAWR 235 (274)
T ss_pred HHHHHHHHHHHHHhhhh-cCCCcccchH-----HHHHHHHH------HhcCCcEEEEEcCcchhHH-HHHHHhccChhhH
Confidence 0000000000 00 000 0000000000 01111111 1458999999999998753 222 3344
Q ss_pred hcC--CCCeEEEEecCCCCCCC-CCChHHHHHHHHHHHH
Q 022534 257 KGN--PNVVKLQMIEGAGHMPQ-EDWPEKVVDGLRYFFL 292 (295)
Q Consensus 257 ~~~--~~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~ 292 (295)
+.+ ++ ++++.+++++|.+. .+.++++.+.|.+||.
T Consensus 236 ~~l~~~~-v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~ 273 (274)
T TIGR03100 236 GALEDPG-IERVEIDGADHTFSDRVWREWVAARTTEWLR 273 (274)
T ss_pred HHhhcCC-eEEEecCCCCcccccHHHHHHHHHHHHHHHh
Confidence 433 55 79999999999984 4557999999999985
No 49
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.84 E-value=7.3e-19 Score=159.30 Aligned_cols=214 Identities=19% Similarity=0.216 Sum_probs=129.7
Q ss_pred CCceEEEEcCCCCCC-ccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---CCCCc
Q 022534 34 RLGTIVFLHGAPSHS-YSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVL---EVKYP 109 (295)
Q Consensus 34 ~~~~vv~lHG~~~~~-~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l---~~~~~ 109 (295)
+.|+||+.||+.+.. ..|..+++.|+++||.|+++|+||||.|.+.... .........+.+++... +.+ .
T Consensus 193 ~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~~~-----~d~~~~~~avld~l~~~~~vd~~-r 266 (414)
T PRK05077 193 PFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWKLT-----QDSSLLHQAVLNALPNVPWVDHT-R 266 (414)
T ss_pred CccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCcc-----ccHHHHHHHHHHHHHhCcccCcc-c
Confidence 355666655655543 5688888999888999999999999999753211 12233445566666554 333 3
Q ss_pred eEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHHhCCCcccccc
Q 022534 110 FFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLD 188 (295)
Q Consensus 110 ~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (295)
+.++ |+|+| .+++.+|..+|++|+++|+++++............ ..+. . .. ..+..+ + +.+.
T Consensus 267 i~l~--G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~~~~~~--~~p~---~-~~-~~la~~-l--g~~~----- 329 (414)
T PRK05077 267 VAAF--GFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTDPKRQQ--QVPE---M-YL-DVLASR-L--GMHD----- 329 (414)
T ss_pred EEEE--EEChHHHHHHHHHHhCCcCceEEEEECCccchhhcchhhhh--hchH---H-HH-HHHHHH-h--CCCC-----
Confidence 5565 77765 56778888899999999988665431100010000 0000 0 00 000000 0 0000
Q ss_pred ccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEe
Q 022534 189 KADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMI 268 (295)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i 268 (295)
.+ . ..+...+....++.. ..+ ..++++|+|+|+|++|+++|++.++.+.+..++ .+++++
T Consensus 330 -~~-----------~-~~l~~~l~~~sl~~~-~~l-----~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~~~-~~l~~i 389 (414)
T PRK05077 330 -AS-----------D-EALRVELNRYSLKVQ-GLL-----GRRCPTPMLSGYWKNDPFSPEEDSRLIASSSAD-GKLLEI 389 (414)
T ss_pred -CC-----------h-HHHHHHhhhccchhh-hhh-----ccCCCCcEEEEecCCCCCCCHHHHHHHHHhCCC-CeEEEc
Confidence 00 0 001111111111100 000 136789999999999999999999988888886 699999
Q ss_pred cCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 269 EGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 269 ~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
|++ ++.|.++++++.|.+||+.
T Consensus 390 ~~~---~~~e~~~~~~~~i~~wL~~ 411 (414)
T PRK05077 390 PFK---PVYRNFDKALQEISDWLED 411 (414)
T ss_pred cCC---CccCCHHHHHHHHHHHHHH
Confidence 997 5668999999999999986
No 50
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.84 E-value=7e-20 Score=145.89 Aligned_cols=221 Identities=20% Similarity=0.325 Sum_probs=138.8
Q ss_pred eEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---CCCCceEEE
Q 022534 37 TIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVL---EVKYPFFLV 113 (295)
Q Consensus 37 ~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l---~~~~~~~lv 113 (295)
.|||||||.++....+.+..+|.+.||+|.||-+||||-.... . -..+.+++.+++.+--+.| +.+. +.++
T Consensus 17 AVLllHGFTGt~~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~--f---l~t~~~DW~~~v~d~Y~~L~~~gy~e-I~v~ 90 (243)
T COG1647 17 AVLLLHGFTGTPRDVRMLGRYLNENGYTVYAPRYPGHGTLPED--F---LKTTPRDWWEDVEDGYRDLKEAGYDE-IAVV 90 (243)
T ss_pred EEEEEeccCCCcHHHHHHHHHHHHCCceEecCCCCCCCCCHHH--H---hcCCHHHHHHHHHHHHHHHHHcCCCe-EEEE
Confidence 7999999999999999999999999999999999999966521 1 1224567777776665554 4454 4444
Q ss_pred EecccchH-HHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHHhCCCcccccccccc
Q 022534 114 VQGFLVGS-YGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADV 192 (295)
Q Consensus 114 ~~G~~~G~-~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (295)
|.|+|+ +++.+|..+| +++++.+++|.....+.. ... +++. +. ++. +.+ +...+. ...++.
T Consensus 91 --GlSmGGv~alkla~~~p--~K~iv~m~a~~~~k~~~~-iie----~~l~-y~-~~~---kk~-e~k~~e---~~~~e~ 152 (243)
T COG1647 91 --GLSMGGVFALKLAYHYP--PKKIVPMCAPVNVKSWRI-IIE----GLLE-YF-RNA---KKY-EGKDQE---QIDKEM 152 (243)
T ss_pred --eecchhHHHHHHHhhCC--ccceeeecCCcccccchh-hhH----HHHH-HH-HHh---hhc-cCCCHH---HHHHHH
Confidence 777764 6888899998 799999987765443211 000 0000 00 000 000 000000 000000
Q ss_pred ccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhc-CCCCeEEEEecCC
Q 022534 193 YRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKG-NPNVVKLQMIEGA 271 (295)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~-~~~~~~~~~i~~~ 271 (295)
.. +... +.....+ +....+.+... ...|..|++++.|++|+.+|.+.+..+... .+.+.++.+++++
T Consensus 153 ~~--~~~~--~~~~~~~------~~~~i~~~~~~--~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~S 220 (243)
T COG1647 153 KS--YKDT--PMTTTAQ------LKKLIKDARRS--LDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGS 220 (243)
T ss_pred HH--hhcc--hHHHHHH------HHHHHHHHHhh--hhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEccC
Confidence 00 0000 0000000 11222222211 126789999999999999999999888765 4556799999999
Q ss_pred CCCCCCC-ChHHHHHHHHHHHHh
Q 022534 272 GHMPQED-WPEKVVDGLRYFFLN 293 (295)
Q Consensus 272 gH~~~~e-~p~~~~~~i~~fl~~ 293 (295)
||....+ +.|++.+.|..||++
T Consensus 221 gHVIt~D~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 221 GHVITLDKERDQVEEDVITFLEK 243 (243)
T ss_pred CceeecchhHHHHHHHHHHHhhC
Confidence 9987554 689999999999974
No 51
>PRK10985 putative hydrolase; Provisional
Probab=99.84 E-value=5e-19 Score=156.12 Aligned_cols=230 Identities=17% Similarity=0.165 Sum_probs=120.0
Q ss_pred CCceEEEEcCCCCCCcc--chhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceE
Q 022534 34 RLGTIVFLHGAPSHSYS--YRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFF 111 (295)
Q Consensus 34 ~~~~vv~lHG~~~~~~~--w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~ 111 (295)
.+|+||++||+++++.. +..+++.|.++||+|+++|+||||.|........... ..+|....+..+.++++.. +++
T Consensus 57 ~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~~~~~~-~~~D~~~~i~~l~~~~~~~-~~~ 134 (324)
T PRK10985 57 HKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHRIYHSG-ETEDARFFLRWLQREFGHV-PTA 134 (324)
T ss_pred CCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcceECCC-chHHHHHHHHHHHHhCCCC-CEE
Confidence 46899999999887654 4568888988899999999999998754321110111 1233333333343344433 466
Q ss_pred EEEecccchH-HHHHHHHhCcCc--cceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhH-HHHHHHHHhCCCccccc
Q 022534 112 LVVQGFLVGS-YGLTWALKNPSR--ISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNA-IMAERFIEAGSPYVLKL 187 (295)
Q Consensus 112 lv~~G~~~G~-~~~~~a~~~p~~--v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 187 (295)
++ |||+|+ +++.++.++++. +++++++++|...... ..........+...+..... ....+....... ....
T Consensus 135 ~v--G~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~~ 210 (324)
T PRK10985 135 AV--GYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEAC-SYRMEQGFSRVYQRYLLNLLKANAARKLAAYPG-TLPI 210 (324)
T ss_pred EE--EecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHH-HHHHhhhHHHHHHHHHHHHHHHHHHHHHHhccc-cccC
Confidence 66 777775 566667666543 8889988877643210 00000000000000000000 000000000000 0000
Q ss_pred ccccccccc-------ccccCCchhH-HHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcC
Q 022534 188 DKADVYRLP-------YLASSGPGFA-LLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGN 259 (295)
Q Consensus 188 ~~~~~~~~~-------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~ 259 (295)
......+.. .......++. ..+.....+. ...+ +++++|+++|+|++|++++++....+.+..
T Consensus 211 ~~~~~~~~~~~~~fd~~~~~~~~g~~~~~~~y~~~~~---~~~l------~~i~~P~lii~g~~D~~~~~~~~~~~~~~~ 281 (324)
T PRK10985 211 NLAQLKSVRRLREFDDLITARIHGFADAIDYYRQCSA---LPLL------NQIRKPTLIIHAKDDPFMTHEVIPKPESLP 281 (324)
T ss_pred CHHHHhcCCcHHHHhhhheeccCCCCCHHHHHHHCCh---HHHH------hCCCCCEEEEecCCCCCCChhhChHHHHhC
Confidence 000000000 0000000111 1111111111 1111 367899999999999999888777777777
Q ss_pred CCCeEEEEecCCCCCCCCCC
Q 022534 260 PNVVKLQMIEGAGHMPQEDW 279 (295)
Q Consensus 260 ~~~~~~~~i~~~gH~~~~e~ 279 (295)
++ +++++++++||+.++|.
T Consensus 282 ~~-~~~~~~~~~GH~~~~~g 300 (324)
T PRK10985 282 PN-VEYQLTEHGGHVGFVGG 300 (324)
T ss_pred CC-eEEEECCCCCceeeCCC
Confidence 76 79999999999999874
No 52
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.81 E-value=4.5e-20 Score=153.88 Aligned_cols=217 Identities=21% Similarity=0.295 Sum_probs=121.7
Q ss_pred CeEEEeCCCCCCCCCCC-CCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEE
Q 022534 63 FHCFAPDWLGFGFSDKP-EKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAIL 140 (295)
Q Consensus 63 ~~via~Dl~G~G~S~~~-~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~ 140 (295)
|+|+++|+||+|.|+.. ... ...|+.+++++++..++++++.++ +.++ |||+| .+++.+|+++|++|++++++
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~-~~~v--G~S~Gg~~~~~~a~~~p~~v~~lvl~ 75 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPD--FPDYTTDDLAADLEALREALGIKK-INLV--GHSMGGMLALEYAAQYPERVKKLVLI 75 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSG--SCTHCHHHHHHHHHHHHHHHTTSS-EEEE--EETHHHHHHHHHHHHSGGGEEEEEEE
T ss_pred CEEEEEeCCCCCCCCCCccCC--cccccHHHHHHHHHHHHHHhCCCC-eEEE--EECCChHHHHHHHHHCchhhcCcEEE
Confidence 79999999999999940 111 235688999999999999999987 6676 77776 46889999999999999998
Q ss_pred cCCC----CCCC-CCch-hhhhhhc-ccchhhhhhhHHHHHHHHHhCCCcccccc-ccccccccc---cccCCchhHHHH
Q 022534 141 NSPL----TASS-PLPG-LFQQLRI-PLLGEFTAQNAIMAERFIEAGSPYVLKLD-KADVYRLPY---LASSGPGFALLE 209 (295)
Q Consensus 141 ~~p~----~~~~-~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~ 209 (295)
+++. .... ..+. ....... ................+... ....... ......... ............
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (230)
T PF00561_consen 76 SPPPDLPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQ--FFAYDREFVEDFLKQFQSQQYARFAETDAFDN 153 (230)
T ss_dssp SESSHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHH
T ss_pred eeeccchhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhh--eeeccCccccchhhccchhhhhHHHHHHHHhh
Confidence 7642 0000 0000 0000000 00000000000000000000 0000000 000000000 000000000000
Q ss_pred HHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHH
Q 022534 210 AARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRY 289 (295)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~ 289 (295)
................ ....+++|+++++|++|+++|++.+..+.+.+|+ .++++++++||..++|.|+++++.|.+
T Consensus 154 ~~~~~~~~~~~~~~~~--~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~~-~~~~~~~~~GH~~~~~~~~~~~~~i~~ 230 (230)
T PF00561_consen 154 MFWNALGYFSVWDPSP--ALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIPN-SQLVLIEGSGHFAFLEGPDEFNEIIIK 230 (230)
T ss_dssp HHHHHHHHHHHHHHHH--HHTTTTSEEEEEEETTCSSSHHHHHHHHHHHSTT-EEEEEETTCCSTHHHHSHHHHHHHHH-
T ss_pred hccccccccccccccc--cccccCCCeEEEEeCCCCCCCHHHHHHHHHhcCC-CEEEECCCCChHHHhcCHHhhhhhhcC
Confidence 0000000000000000 0126899999999999999999999999999998 799999999999999999999998863
No 53
>PRK13604 luxD acyl transferase; Provisional
Probab=99.80 E-value=2e-17 Score=141.67 Aligned_cols=230 Identities=15% Similarity=0.143 Sum_probs=129.6
Q ss_pred cccccceeeEEe-CcEEEEEEEcCCC---CCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCC-CCCCCCCC
Q 022534 7 NKGREYGSYIKS-GEYRWFVRETGSA---DSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGF-GFSDKPEK 81 (295)
Q Consensus 7 ~~~~~~~~~~~~-~~~~~~~~~~g~~---~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~-G~S~~~~~ 81 (295)
+++.-|.-.+.+ +|..+.....-+. ..++++||+.||++++...+..+++.|+++||.|+.+|.||| |.|++...
T Consensus 5 ~~~~~~~~~~~~~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~ 84 (307)
T PRK13604 5 SSFKTIDHVICLENGQSIRVWETLPKENSPKKNNTILIASGFARRMDHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTID 84 (307)
T ss_pred ccccchhheEEcCCCCEEEEEEEcCcccCCCCCCEEEEeCCCCCChHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCccc
Confidence 333445555555 5777777655442 234578999999999876688999999999999999999998 99986432
Q ss_pred CCCCCCCCHHHHHHHHHHHHH---HhCCCCceEEEEecccchHHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhh
Q 022534 82 GYDDFDFTENEFHEELDKLLD---VLEVKYPFFLVVQGFLVGSYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLR 158 (295)
Q Consensus 82 ~~~~~~~~~~~~~~~l~~~~~---~l~~~~~~~lv~~G~~~G~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~ 158 (295)
.. +......|+..+++ ..+.+ ++.|+ |||+|+..+..++..+ +++.+|+. ||+.... ..+.. .
T Consensus 85 ~~-----t~s~g~~Dl~aaid~lk~~~~~-~I~Li--G~SmGgava~~~A~~~-~v~~lI~~-sp~~~l~---d~l~~-~ 150 (307)
T PRK13604 85 EF-----TMSIGKNSLLTVVDWLNTRGIN-NLGLI--AASLSARIAYEVINEI-DLSFLITA-VGVVNLR---DTLER-A 150 (307)
T ss_pred cC-----cccccHHHHHHHHHHHHhcCCC-ceEEE--EECHHHHHHHHHhcCC-CCCEEEEc-CCcccHH---HHHHH-h
Confidence 21 22223455544444 33434 46665 7888764333333333 47877765 5654321 11110 0
Q ss_pred cccchhhhhhhHHHHHHHHHhCCCccccccccccccccccccCCch-hHHHHHHHhcchh---hhhHhhhcCcCCCCCCC
Q 022534 159 IPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPG-FALLEAARKVNFK---DISSRIGAGFSSGSWDK 234 (295)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 234 (295)
... .+. ..+........+ + .-...+ ..++......++. ...+.+ +.+++
T Consensus 151 ~~~--~~~-------------~~p~~~lp~~~d-~-----~g~~l~~~~f~~~~~~~~~~~~~s~i~~~------~~l~~ 203 (307)
T PRK13604 151 LGY--DYL-------------SLPIDELPEDLD-F-----EGHNLGSEVFVTDCFKHGWDTLDSTINKM------KGLDI 203 (307)
T ss_pred hhc--ccc-------------cCcccccccccc-c-----ccccccHHHHHHHHHhcCccccccHHHHH------hhcCC
Confidence 000 000 000000000000 0 000000 1112211111111 011111 25689
Q ss_pred cEEEEEeCCCCCCCcchHHHHHhcCC-CCeEEEEecCCCCCCCC
Q 022534 235 PVLVAWGISDKYLPQSVAEEFQKGNP-NVVKLQMIEGAGHMPQE 277 (295)
Q Consensus 235 P~l~i~G~~D~~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~ 277 (295)
|+|+|||++|.++|++.+..+++..+ ..++++++||++|...+
T Consensus 204 PvLiIHG~~D~lVp~~~s~~l~e~~~s~~kkl~~i~Ga~H~l~~ 247 (307)
T PRK13604 204 PFIAFTANNDSWVKQSEVIDLLDSIRSEQCKLYSLIGSSHDLGE 247 (307)
T ss_pred CEEEEEcCCCCccCHHHHHHHHHHhccCCcEEEEeCCCccccCc
Confidence 99999999999999999999988764 35899999999998643
No 54
>PLN02872 triacylglycerol lipase
Probab=99.80 E-value=2e-18 Score=154.81 Aligned_cols=280 Identities=17% Similarity=0.224 Sum_probs=153.6
Q ss_pred ccccceeeEEe-CcEEEEEEEcCCC-----CCCCceEEEEcCCCCCCccch------hhHHHhhhCCCeEEEeCCCCCCC
Q 022534 8 KGREYGSYIKS-GEYRWFVRETGSA-----DSRLGTIVFLHGAPSHSYSYR------NVMSQMSDAGFHCFAPDWLGFGF 75 (295)
Q Consensus 8 ~~~~~~~~~~~-~~~~~~~~~~g~~-----~~~~~~vv~lHG~~~~~~~w~------~~~~~l~~~~~~via~Dl~G~G~ 75 (295)
-++.+-.+|+. +|+.+.......+ ...+|+|+|+||++.++..|. .++..|+++||+|+++|+||+|.
T Consensus 41 gy~~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~~ 120 (395)
T PLN02872 41 GYSCTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTRW 120 (395)
T ss_pred CCCceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCccccccccccc
Confidence 35555556655 6888887664211 123579999999998888884 23445777899999999999987
Q ss_pred CCCCC----CCCCCCCCCHHHHH-HHHHHHHHHhC--CCCceEEEEecccchHHHHHHHHhCcC---ccceeEEEcCCCC
Q 022534 76 SDKPE----KGYDDFDFTENEFH-EELDKLLDVLE--VKYPFFLVVQGFLVGSYGLTWALKNPS---RISKLAILNSPLT 145 (295)
Q Consensus 76 S~~~~----~~~~~~~~~~~~~~-~~l~~~~~~l~--~~~~~~lv~~G~~~G~~~~~~a~~~p~---~v~~lil~~~p~~ 145 (295)
|.+.. ....-.+++.++++ .|+.++++.+. ..++++++ |||+|+..+..++.+|+ +|+.++++++...
T Consensus 121 s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~~~v~~V--GhS~Gg~~~~~~~~~p~~~~~v~~~~~l~P~~~ 198 (395)
T PLN02872 121 SYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITNSKIFIV--GHSQGTIMSLAALTQPNVVEMVEAAALLCPISY 198 (395)
T ss_pred ccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccCCceEEE--EECHHHHHHHHHhhChHHHHHHHHHHHhcchhh
Confidence 74311 11101246777787 79999999862 12456776 77887643335557776 5777777643322
Q ss_pred CCCCCchhhhhhhcc----c---ch--hhhhhhHHH---HHHH----------H--HhCCCccccccccccccccccccC
Q 022534 146 ASSPLPGLFQQLRIP----L---LG--EFTAQNAIM---AERF----------I--EAGSPYVLKLDKADVYRLPYLASS 201 (295)
Q Consensus 146 ~~~~~~~~~~~~~~~----~---~~--~~~~~~~~~---~~~~----------~--~~~~~~~~~~~~~~~~~~~~~~~~ 201 (295)
...........+... + ++ ++...+..+ ...+ + -.+....+.. .+++.....
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~C~~~~~c~~~~~~~~g~~~~~n~-----~~~~~~~~~ 273 (395)
T PLN02872 199 LDHVTAPLVLRMVFMHLDQMVVAMGIHQLNFRSDVLVKLLDSICEGHMDCNDLLTSITGTNCCFNA-----SRIDYYLEY 273 (395)
T ss_pred hccCCCHHHHHHHHHhHHHHHHHhcCceecCCcHHHHHHHHHHccCchhHHHHHHHHhCCCcccch-----hhhhHHHhc
Confidence 111111111000000 0 00 000000000 0000 0 0000000000 011111111
Q ss_pred Cc-h---hHH---HHHHHhcchh-------hhhHh----hhcCcCCCCC--CCcEEEEEeCCCCCCCcchHHHHHhcCCC
Q 022534 202 GP-G---FAL---LEAARKVNFK-------DISSR----IGAGFSSGSW--DKPVLVAWGISDKYLPQSVAEEFQKGNPN 261 (295)
Q Consensus 202 ~~-~---~~~---~~~~~~~~~~-------~~~~~----~~~~~~~~~~--~~P~l~i~G~~D~~~~~~~~~~~~~~~~~ 261 (295)
.| | ..+ .+..+.-.|. ..... .+..+...++ ++|+++++|++|.+++++...++.+.+++
T Consensus 274 ~pagtS~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~ 353 (395)
T PLN02872 274 EPHPSSVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDVEHTLAELPS 353 (395)
T ss_pred CCCcchHHHHHHHHHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHHHHHHHHHHCCC
Confidence 00 0 000 1111100010 00000 0111223345 58999999999999999888999888887
Q ss_pred CeEEEEecCCCCC---CCCCChHHHHHHHHHHHHhc
Q 022534 262 VVKLQMIEGAGHM---PQEDWPEKVVDGLRYFFLNY 294 (295)
Q Consensus 262 ~~~~~~i~~~gH~---~~~e~p~~~~~~i~~fl~~~ 294 (295)
..+++.+++++|. ...|.|+++.+.|.+|+..+
T Consensus 354 ~~~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~~ 389 (395)
T PLN02872 354 KPELLYLENYGHIDFLLSTSAKEDVYNHMIQFFRSL 389 (395)
T ss_pred ccEEEEcCCCCCHHHHhCcchHHHHHHHHHHHHHHh
Confidence 5689999999995 56799999999999999764
No 55
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.80 E-value=8.2e-18 Score=141.27 Aligned_cols=263 Identities=24% Similarity=0.350 Sum_probs=143.8
Q ss_pred EEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhC--CCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHH
Q 022534 16 IKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDA--GFHCFAPDWLGFGFSDKPEKGYDDFDFTENEF 93 (295)
Q Consensus 16 ~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~--~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~ 93 (295)
....+..+.|...+.+ .|+++++||++++...|......+... .|+|+++|+||||.|. .. .++...+
T Consensus 5 ~~~~~~~~~~~~~~~~---~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~-~~------~~~~~~~ 74 (282)
T COG0596 5 LAADGVRLAYREAGGG---GPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSD-PA------GYSLSAY 74 (282)
T ss_pred ccCCCeEEEEeecCCC---CCeEEEeCCCCCchhhhHHHHHHhhccccceEEEEecccCCCCCC-cc------cccHHHH
Confidence 3445667777776654 358999999999999998843343321 2899999999999998 11 1234456
Q ss_pred HHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchh---hhhhhcccchhhhhhh
Q 022534 94 HEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGL---FQQLRIPLLGEFTAQN 169 (295)
Q Consensus 94 ~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~ 169 (295)
+.++..++++++..+ ++++ |||+| .++..++.++|++++++++++++.......... ................
T Consensus 75 ~~~~~~~~~~~~~~~-~~l~--G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (282)
T COG0596 75 ADDLAALLDALGLEK-VVLV--GHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLLLGL 151 (282)
T ss_pred HHHHHHHHHHhCCCc-eEEE--EecccHHHHHHHHHhcchhhheeeEecCCCCcccccCccccCccccchhhhhhhhhcc
Confidence 899999999999876 5666 66666 567888999999999999987543311000000 0000000000000000
Q ss_pred -HHHHHHHHHhCC-Ccccccc--ccccccccccccCCchhHHHHHHHhcchhhhhHhhhc---CcCCCCCCCcEEEEEeC
Q 022534 170 -AIMAERFIEAGS-PYVLKLD--KADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGA---GFSSGSWDKPVLVAWGI 242 (295)
Q Consensus 170 -~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~P~l~i~G~ 242 (295)
......+..... ....... ......... ........................... ......+++|+++++|+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~ 230 (282)
T COG0596 152 DAAAFAALLAALGLLAALAAAARAGLAEALRA-PLLGAAAAAFARAARADLAAALLALLDRDLRAALARITVPTLIIHGE 230 (282)
T ss_pred chhhhhhhhhcccccccccccchhcccccccc-ccchhHhhhhhhhcccccchhhhcccccccchhhccCCCCeEEEecC
Confidence 000000000000 0000000 000000000 000000000000000000000000000 01123568999999999
Q ss_pred CCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHH
Q 022534 243 SDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFL 292 (295)
Q Consensus 243 ~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 292 (295)
+|.+.+......+.+..+..+++++++++||++++|+|+.+++.+.+|+.
T Consensus 231 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~~~~ 280 (282)
T COG0596 231 DDPVVPAELARRLAAALPNDARLVVIPGAGHFPHLEAPEAFAAALLAFLE 280 (282)
T ss_pred CCCcCCHHHHHHHHhhCCCCceEEEeCCCCCcchhhcHHHHHHHHHHHHh
Confidence 99666655456666666633699999999999999999999999998543
No 56
>PRK10566 esterase; Provisional
Probab=99.79 E-value=1.6e-17 Score=141.04 Aligned_cols=221 Identities=17% Similarity=0.230 Sum_probs=121.9
Q ss_pred EEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCC--C-CHHHHHHHH
Q 022534 21 YRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFD--F-TENEFHEEL 97 (295)
Q Consensus 21 ~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~--~-~~~~~~~~l 97 (295)
..++|...+.++.+.|+||++||++++...|..++..|+++||+|+++|+||||.|....... ... + ....-.+++
T Consensus 13 ~~~~~~p~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~-~~~~~~~~~~~~~~~~ 91 (249)
T PRK10566 13 EVLHAFPAGQRDTPLPTVFFYHGFTSSKLVYSYFAVALAQAGFRVIMPDAPMHGARFSGDEAR-RLNHFWQILLQNMQEF 91 (249)
T ss_pred ceEEEcCCCCCCCCCCEEEEeCCCCcccchHHHHHHHHHhCCCEEEEecCCcccccCCCcccc-chhhHHHHHHHHHHHH
Confidence 335554444323345899999999999888999999998889999999999999864321110 000 0 001112333
Q ss_pred HHHHHHh---C-CC-CceEEEEecccchH-HHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHH
Q 022534 98 DKLLDVL---E-VK-YPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAI 171 (295)
Q Consensus 98 ~~~~~~l---~-~~-~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (295)
.++++.+ + ++ +.+.++ |||+|+ +++.++.++|+....++++.++... . ......+
T Consensus 92 ~~~~~~l~~~~~~~~~~i~v~--G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~----------- 152 (249)
T PRK10566 92 PTLRAAIREEGWLLDDRLAVG--GASMGGMTALGIMARHPWVKCVASLMGSGYFT-----S-LARTLFP----------- 152 (249)
T ss_pred HHHHHHHHhcCCcCccceeEE--eecccHHHHHHHHHhCCCeeEEEEeeCcHHHH-----H-HHHHhcc-----------
Confidence 3333332 1 22 235555 777765 5666777888644444444332110 0 0000000
Q ss_pred HHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCC-CCcEEEEEeCCCCCCCcc
Q 022534 172 MAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSW-DKPVLVAWGISDKYLPQS 250 (295)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~l~i~G~~D~~~~~~ 250 (295)
.... ......... ..........+... .+ .++ ++|+|+|+|++|.+++++
T Consensus 153 -------~~~~----~~~~~~~~~---------~~~~~~~~~~~~~~---~~------~~i~~~P~Lii~G~~D~~v~~~ 203 (249)
T PRK10566 153 -------PLIP----ETAAQQAEF---------NNIVAPLAEWEVTH---QL------EQLADRPLLLWHGLADDVVPAA 203 (249)
T ss_pred -------cccc----cccccHHHH---------HHHHHHHhhcChhh---hh------hhcCCCCEEEEEcCCCCcCCHH
Confidence 0000 000000000 00011111111011 11 133 699999999999999999
Q ss_pred hHHHHHhcCCC-----CeEEEEecCCCCCCCCCChHHHHHHHHHHHHhc
Q 022534 251 VAEEFQKGNPN-----VVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLNY 294 (295)
Q Consensus 251 ~~~~~~~~~~~-----~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (295)
.+.++++.+.. .++++.++++||... + +..+.+.+||++.
T Consensus 204 ~~~~l~~~l~~~g~~~~~~~~~~~~~~H~~~---~-~~~~~~~~fl~~~ 248 (249)
T PRK10566 204 ESLRLQQALRERGLDKNLTCLWEPGVRHRIT---P-EALDAGVAFFRQH 248 (249)
T ss_pred HHHHHHHHHHhcCCCcceEEEecCCCCCccC---H-HHHHHHHHHHHhh
Confidence 88888765532 257889999999863 4 4568899998863
No 57
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.79 E-value=5.6e-18 Score=151.04 Aligned_cols=244 Identities=14% Similarity=0.234 Sum_probs=133.2
Q ss_pred CceEEEEcCCCCCCcc-----chhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHH-----HHHHHHHHHh
Q 022534 35 LGTIVFLHGAPSHSYS-----YRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFH-----EELDKLLDVL 104 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~~-----w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~-----~~l~~~~~~l 104 (295)
++|||++||+..+... |+.+++.|+++||+|+++|++|+|.|+... +.++++ ..+..+.+..
T Consensus 62 ~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~~--------~~~d~~~~~~~~~v~~l~~~~ 133 (350)
T TIGR01836 62 KTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRYL--------TLDDYINGYIDKCVDYICRTS 133 (350)
T ss_pred CCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhcC--------CHHHHHHHHHHHHHHHHHHHh
Confidence 5689999998655544 468999999889999999999999887432 344554 3344444455
Q ss_pred CCCCceEEEEecccchH-HHHHHHHhCcCccceeEEEcCCCCCCCCCch--hhhh-hh----cccchhhhhhhHHHHHHH
Q 022534 105 EVKYPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNSPLTASSPLPG--LFQQ-LR----IPLLGEFTAQNAIMAERF 176 (295)
Q Consensus 105 ~~~~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~--~~~~-~~----~~~~~~~~~~~~~~~~~~ 176 (295)
+.++ ++++ |||+|+ +++.+++.+|++|++++++++|......... ...+ .. ....+.+. ...+...|
T Consensus 134 ~~~~-i~lv--GhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--~~~~~~~f 208 (350)
T TIGR01836 134 KLDQ-ISLL--GICQGGTFSLCYAALYPDKIKNLVTMVTPVDFETPGNMLSNWARHVDIDLAVDTMGNIP--GELLNLTF 208 (350)
T ss_pred CCCc-ccEE--EECHHHHHHHHHHHhCchheeeEEEeccccccCCCCchhhhhccccCHHHHHHhcCCCC--HHHHHHHH
Confidence 5554 6666 777764 6777888999999999999877653221100 0000 00 00000000 00000000
Q ss_pred HHhCCCc--c-----------ccccc-cccc---cccccccCCchhHHHHHHHhc---c-hhhhhHhh-hcCcCCCCCCC
Q 022534 177 IEAGSPY--V-----------LKLDK-ADVY---RLPYLASSGPGFALLEAARKV---N-FKDISSRI-GAGFSSGSWDK 234 (295)
Q Consensus 177 ~~~~~~~--~-----------~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~-~~~~~~~~~~~ 234 (295)
.. ..|. . ..... .... ++.......++..+.+..... + +..-...+ ......+.+++
T Consensus 209 ~~-l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~d~~~~~~~~~~~~~~~~~~~n~l~~g~~~~~~~~~~l~~i~~ 287 (350)
T TIGR01836 209 LM-LKPFSLGYQKYVNLVDILEDERKVENFLRMEKWIFDSPDQAGEAFRQFVKDFYQQNGLINGEVEIGGRKVDLKNIKM 287 (350)
T ss_pred Hh-cCcchhhhHHHHHHHHhcCChHHHHHHHHHHHHhcCCcCccHHHHHHHHHHHHhcCcccCCeeEECCEEccHHhCCC
Confidence 00 0000 0 00000 0000 000000011121121111110 0 00000000 00011236789
Q ss_pred cEEEEEeCCCCCCCcchHHHHHhcCCC-CeEEEEecCCCCCCCCCC---hHHHHHHHHHHHHh
Q 022534 235 PVLVAWGISDKYLPQSVAEEFQKGNPN-VVKLQMIEGAGHMPQEDW---PEKVVDGLRYFFLN 293 (295)
Q Consensus 235 P~l~i~G~~D~~~~~~~~~~~~~~~~~-~~~~~~i~~~gH~~~~e~---p~~~~~~i~~fl~~ 293 (295)
|+++++|++|.+++++.+..+.+.++. .+++++++ +||...+.. ++++...|.+||..
T Consensus 288 Pvliv~G~~D~i~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~v~~~i~~wl~~ 349 (350)
T TIGR01836 288 PILNIYAERDHLVPPDASKALNDLVSSEDYTELSFP-GGHIGIYVSGKAQKEVPPAIGKWLQA 349 (350)
T ss_pred CeEEEecCCCCcCCHHHHHHHHHHcCCCCeEEEEcC-CCCEEEEECchhHhhhhHHHHHHHHh
Confidence 999999999999999999999888764 35777777 799875543 58999999999975
No 58
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.79 E-value=1.4e-17 Score=153.62 Aligned_cols=236 Identities=14% Similarity=0.171 Sum_probs=138.6
Q ss_pred CCceEEEEcCCCCCCccch-----hhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCC
Q 022534 34 RLGTIVFLHGAPSHSYSYR-----NVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKY 108 (295)
Q Consensus 34 ~~~~vv~lHG~~~~~~~w~-----~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~ 108 (295)
.++|||++||+......|+ -++.+|.++||+|+++|++|+|.|++... . .+|..+.+...+..+++.++.++
T Consensus 187 ~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~-~--ddY~~~~i~~al~~v~~~~g~~k 263 (532)
T TIGR01838 187 HKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKT-F--DDYIRDGVIAALEVVEAITGEKQ 263 (532)
T ss_pred CCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCC-h--hhhHHHHHHHHHHHHHHhcCCCC
Confidence 3579999999998888886 68899988899999999999999986432 1 24566667788888888888775
Q ss_pred ceEEEEecccch-HHH---H-HHHHhC-cCccceeEEEcCCCCCCCCCchhhhhh----hcccchhhh------------
Q 022534 109 PFFLVVQGFLVG-SYG---L-TWALKN-PSRISKLAILNSPLTASSPLPGLFQQL----RIPLLGEFT------------ 166 (295)
Q Consensus 109 ~~~lv~~G~~~G-~~~---~-~~a~~~-p~~v~~lil~~~p~~~~~~~~~~~~~~----~~~~~~~~~------------ 166 (295)
++++ |||+| .++ + .+++.+ |++|+++++++++...... +....+ ....+....
T Consensus 264 -v~lv--G~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~--G~l~~f~~~~~~~~~e~~~~~~G~lpg~~m~ 338 (532)
T TIGR01838 264 -VNCV--GYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDP--GELGVFVDEEIVAGIERQNGGGGYLDGRQMA 338 (532)
T ss_pred -eEEE--EECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCc--chhhhhcCchhHHHHHHHHHhcCCCCHHHHH
Confidence 6666 77665 442 1 245555 7899999999887654321 111100 000000000
Q ss_pred ------hhhHHHHHHHHHhCCCccccccc--cccccccccccCCchhHHHHHHHhcchhhhhH--hhh---cCcCCCCCC
Q 022534 167 ------AQNAIMAERFIEAGSPYVLKLDK--ADVYRLPYLASSGPGFALLEAARKVNFKDISS--RIG---AGFSSGSWD 233 (295)
Q Consensus 167 ------~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~~~~~~~~ 233 (295)
..+......++. .++..... .+...+......-|+....+.++..-....+. .+. ......+++
T Consensus 339 ~~F~~lrp~~l~w~~~v~---~yl~g~~~~~fdll~Wn~D~t~lP~~~~~~~lr~ly~~N~L~~G~~~v~g~~~dL~~I~ 415 (532)
T TIGR01838 339 VTFSLLRENDLIWNYYVD---NYLKGKSPVPFDLLFWNSDSTNLPGKMHNFYLRNLYLQNALTTGGLEVCGVRLDLSKVK 415 (532)
T ss_pred HHHHhcChhhHHHHHHHH---HHhcCCCccchhHHHHhccCccchHHHHHHHHHHHHhcCCCcCCeeEECCEecchhhCC
Confidence 000000011110 00010000 00000000111223333322222111010000 000 001124689
Q ss_pred CcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChH
Q 022534 234 KPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPE 281 (295)
Q Consensus 234 ~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~ 281 (295)
+|+|+|+|++|.+++.+.+..+.+.+++ .+.++++++||++++|+|.
T Consensus 416 vPvLvV~G~~D~IvP~~sa~~l~~~i~~-~~~~vL~~sGHi~~ienPp 462 (532)
T TIGR01838 416 VPVYIIATREDHIAPWQSAYRGAALLGG-PKTFVLGESGHIAGVVNPP 462 (532)
T ss_pred CCEEEEeeCCCCcCCHHHHHHHHHHCCC-CEEEEECCCCCchHhhCCC
Confidence 9999999999999999999999988986 6889999999999999875
No 59
>PRK11071 esterase YqiA; Provisional
Probab=99.78 E-value=2.8e-17 Score=133.69 Aligned_cols=183 Identities=15% Similarity=0.141 Sum_probs=119.0
Q ss_pred ceEEEEcCCCCCCccchh--hHHHhhh--CCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceE
Q 022534 36 GTIVFLHGAPSHSYSYRN--VMSQMSD--AGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFF 111 (295)
Q Consensus 36 ~~vv~lHG~~~~~~~w~~--~~~~l~~--~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~ 111 (295)
|+|||+|||+++..+|+. +.+.+++ .+|+|+++|+|||| +++++++.+++++++.++ ++
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~----------------~~~~~~l~~l~~~~~~~~-~~ 64 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP----------------ADAAELLESLVLEHGGDP-LG 64 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH----------------HHHHHHHHHHHHHcCCCC-eE
Confidence 589999999999999984 3455654 26999999999984 246789999999988775 66
Q ss_pred EEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHHhCCCcccccccc
Q 022534 112 LVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKA 190 (295)
Q Consensus 112 lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (295)
++ |+|+| .+++.+|.++|. ++++++++.. +. ... ..+...... ....
T Consensus 65 lv--G~S~Gg~~a~~~a~~~~~---~~vl~~~~~~-----~~--~~~----------------~~~~~~~~~----~~~~ 112 (190)
T PRK11071 65 LV--GSSLGGYYATWLSQCFML---PAVVVNPAVR-----PF--ELL----------------TDYLGENEN----PYTG 112 (190)
T ss_pred EE--EECHHHHHHHHHHHHcCC---CEEEECCCCC-----HH--HHH----------------HHhcCCccc----ccCC
Confidence 66 77765 568888889984 3567754332 10 000 011100000 0000
Q ss_pred ccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecC
Q 022534 191 DVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEG 270 (295)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~ 270 (295)
..+.+ +..+....+..+. .. -+..+|+++|+|++|.++|++.+.++++. ++.++++|
T Consensus 113 ~~~~~--------~~~~~~d~~~~~~----~~-------i~~~~~v~iihg~~De~V~~~~a~~~~~~----~~~~~~~g 169 (190)
T PRK11071 113 QQYVL--------ESRHIYDLKVMQI----DP-------LESPDLIWLLQQTGDEVLDYRQAVAYYAA----CRQTVEEG 169 (190)
T ss_pred CcEEE--------cHHHHHHHHhcCC----cc-------CCChhhEEEEEeCCCCcCCHHHHHHHHHh----cceEEECC
Confidence 00000 0122222221110 00 13578999999999999999999999882 56778899
Q ss_pred CCCCCCCCChHHHHHHHHHHHH
Q 022534 271 AGHMPQEDWPEKVVDGLRYFFL 292 (295)
Q Consensus 271 ~gH~~~~e~p~~~~~~i~~fl~ 292 (295)
++|.. ...+++.+.|.+|+.
T Consensus 170 gdH~f--~~~~~~~~~i~~fl~ 189 (190)
T PRK11071 170 GNHAF--VGFERYFNQIVDFLG 189 (190)
T ss_pred CCcch--hhHHHhHHHHHHHhc
Confidence 99987 555889999999974
No 60
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.74 E-value=3.7e-16 Score=156.39 Aligned_cols=248 Identities=17% Similarity=0.248 Sum_probs=139.8
Q ss_pred CCceEEEEcCCCCCCccchhh-----HHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---hC
Q 022534 34 RLGTIVFLHGAPSHSYSYRNV-----MSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDV---LE 105 (295)
Q Consensus 34 ~~~~vv~lHG~~~~~~~w~~~-----~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~---l~ 105 (295)
..+||||+||++.++..|+.+ ++.|.++||+|+++| +|.|+++... ..+++.+++..+.+.++. +.
T Consensus 66 ~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d---~G~~~~~~~~---~~~~l~~~i~~l~~~l~~v~~~~ 139 (994)
T PRK07868 66 VGPPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVID---FGSPDKVEGG---MERNLADHVVALSEAIDTVKDVT 139 (994)
T ss_pred CCCcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEc---CCCCChhHcC---ccCCHHHHHHHHHHHHHHHHHhh
Confidence 357999999999999999976 788987899999999 5777765422 235677777667666665 23
Q ss_pred CCCceEEEEecccch-HHHHHHHHh-CcCccceeEEEcCCCCCCCCCc-hhhhh-------------hhc-ccchhhhhh
Q 022534 106 VKYPFFLVVQGFLVG-SYGLTWALK-NPSRISKLAILNSPLTASSPLP-GLFQQ-------------LRI-PLLGEFTAQ 168 (295)
Q Consensus 106 ~~~~~~lv~~G~~~G-~~~~~~a~~-~p~~v~~lil~~~p~~~~~~~~-~~~~~-------------~~~-~~~~~~~~~ 168 (295)
.+ +++++ |||+| .+++.+|+. .|++|++++++++|.+.....+ ..... ... .+-+.+...
T Consensus 140 ~~-~v~lv--G~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 216 (994)
T PRK07868 140 GR-DVHLV--GYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMADHVFNRLDIPGWMART 216 (994)
T ss_pred CC-ceEEE--EEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhhhhcccccchhhhhhcCCCCHHHHHH
Confidence 34 46777 77665 567777764 4568999999988864321100 00000 000 000000000
Q ss_pred -----hHH-HHH---HHHHh--CCCccccccc-ccccccc-ccccCCchhHHHHHHHhcchh-hhhH-hhh-cC--cCCC
Q 022534 169 -----NAI-MAE---RFIEA--GSPYVLKLDK-ADVYRLP-YLASSGPGFALLEAARKVNFK-DISS-RIG-AG--FSSG 230 (295)
Q Consensus 169 -----~~~-~~~---~~~~~--~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~-~~--~~~~ 230 (295)
+.. ... .+... ...+....+. ....+.. +. ..++....+..+..... .... .+. .+ ...+
T Consensus 217 ~~~~l~p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~w~--~~~g~~~~~~~~~~~~~n~~~~g~~~~~~~~~~L~ 294 (994)
T PRK07868 217 GFQMLDPVKTAKARVDFLRQLHDREALLPREQQRRFLESEGWI--AWSGPAISELLKQFIAHNRMMTGGFAINGQMVTLA 294 (994)
T ss_pred HHHhcChhHHHHHHHHHHHhcCchhhhccchhhHhHHHHhhcc--ccchHHHHHHHHHHHHhCcccCceEEECCEEcchh
Confidence 000 000 00100 0000000000 0000000 00 11121111111110000 0000 000 00 0134
Q ss_pred CCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEE-EEecCCCCCCCC---CChHHHHHHHHHHHHh
Q 022534 231 SWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKL-QMIEGAGHMPQE---DWPEKVVDGLRYFFLN 293 (295)
Q Consensus 231 ~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~-~~i~~~gH~~~~---e~p~~~~~~i~~fl~~ 293 (295)
++++|+|+|+|++|++++++.+..+.+.+++ .++ .++++|||+.++ ..|+++.-.|.+||..
T Consensus 295 ~i~~P~L~i~G~~D~ivp~~~~~~l~~~i~~-a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~ 360 (994)
T PRK07868 295 DITCPVLAFVGEVDDIGQPASVRGIRRAAPN-AEVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKW 360 (994)
T ss_pred hCCCCEEEEEeCCCCCCCHHHHHHHHHhCCC-CeEEEEeCCCCCEeeeechhhhhhhChHHHHHHHH
Confidence 7899999999999999999999999999987 677 788999999766 3688999999999975
No 61
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.71 E-value=3.1e-16 Score=129.10 Aligned_cols=107 Identities=21% Similarity=0.354 Sum_probs=81.5
Q ss_pred CCCCCCCceEEEEcCCCCCCccchhhHHHhhhC-CCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh--C
Q 022534 29 GSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDA-GFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVL--E 105 (295)
Q Consensus 29 g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l--~ 105 (295)
++.....|.++++||++.+.-+|-.++..|... ..+|+|+|+||||+|--... .+.+.+.+++|+-.+++.+ .
T Consensus 68 ~~~~t~gpil~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e----~dlS~eT~~KD~~~~i~~~fge 143 (343)
T KOG2564|consen 68 LPSATEGPILLLLHGGGSSALSFAIFASELKSKIRCRCLALDLRGHGETKVENE----DDLSLETMSKDFGAVIKELFGE 143 (343)
T ss_pred cCCCCCccEEEEeecCcccchhHHHHHHHHHhhcceeEEEeeccccCccccCCh----hhcCHHHHHHHHHHHHHHHhcc
Confidence 443344578999999999999999999998743 67899999999999976432 2568899999999999986 2
Q ss_pred CCCceEEEEecccc-hHHHHHHHH--hCcCccceeEEEcC
Q 022534 106 VKYPFFLVVQGFLV-GSYGLTWAL--KNPSRISKLAILNS 142 (295)
Q Consensus 106 ~~~~~~lv~~G~~~-G~~~~~~a~--~~p~~v~~lil~~~ 142 (295)
...+++|| |||+ |+++...|. .-|. +.+|++++.
T Consensus 144 ~~~~iilV--GHSmGGaIav~~a~~k~lps-l~Gl~viDV 180 (343)
T KOG2564|consen 144 LPPQIILV--GHSMGGAIAVHTAASKTLPS-LAGLVVIDV 180 (343)
T ss_pred CCCceEEE--eccccchhhhhhhhhhhchh-hhceEEEEE
Confidence 33457777 6765 578766554 4676 788988763
No 62
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.70 E-value=5.5e-15 Score=122.73 Aligned_cols=258 Identities=20% Similarity=0.257 Sum_probs=152.0
Q ss_pred CcEEEEEEEcCCCCCCCceEEEEcCCCCCCcc-chh-----hHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCC-CHH
Q 022534 19 GEYRWFVRETGSADSRLGTIVFLHGAPSHSYS-YRN-----VMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDF-TEN 91 (295)
Q Consensus 19 ~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~-w~~-----~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~-~~~ 91 (295)
.-..+|+...|+++..+|.+|=.|+.+.++.+ |.. .+..+.+ +|-|+-+|-|||-.-...-+ .+|.| |++
T Consensus 30 ~~G~v~V~V~Gd~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~-~fcv~HV~~PGqe~gAp~~p--~~y~yPsmd 106 (326)
T KOG2931|consen 30 AHGVVHVTVYGDPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILE-HFCVYHVDAPGQEDGAPSFP--EGYPYPSMD 106 (326)
T ss_pred ccccEEEEEecCCCCCCceEEEecccccchHhHhHHhhcCHhHHHHHh-heEEEecCCCccccCCccCC--CCCCCCCHH
Confidence 33567777789877667888889999988876 543 3344555 59999999999976543222 24445 899
Q ss_pred HHHHHHHHHHHHhCCCCceEEEEecccchHHH-HHHHHhCcCccceeEEEcCCCCCCCCCchhhh-hhhcccchhh-hhh
Q 022534 92 EFHEELDKLLDVLEVKYPFFLVVQGFLVGSYG-LTWALKNPSRISKLAILNSPLTASSPLPGLFQ-QLRIPLLGEF-TAQ 168 (295)
Q Consensus 92 ~~~~~l~~~~~~l~~~~~~~lv~~G~~~G~~~-~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~-~~~~~~~~~~-~~~ 168 (295)
+++++|..++++++++. + ||.|-..|++. ..+|+.||++|-+|||+++-..... |.+++. ++...++... ..+
T Consensus 107 ~LAd~l~~VL~~f~lk~-v--Ig~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~g-wiew~~~K~~s~~l~~~Gmt~ 182 (326)
T KOG2931|consen 107 DLADMLPEVLDHFGLKS-V--IGMGVGAGAYILARFALNHPERVLGLVLINCDPCAKG-WIEWAYNKVSSNLLYYYGMTQ 182 (326)
T ss_pred HHHHHHHHHHHhcCcce-E--EEecccccHHHHHHHHhcChhheeEEEEEecCCCCch-HHHHHHHHHHHHHHHhhchhh
Confidence 99999999999999985 3 33354346543 5789999999999999986444332 222211 1110000000 000
Q ss_pred --hHHHHHHHHHhCCCccccccccc---cccccccccCCchh-H-HHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEe
Q 022534 169 --NAIMAERFIEAGSPYVLKLDKAD---VYRLPYLASSGPGF-A-LLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWG 241 (295)
Q Consensus 169 --~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G 241 (295)
...+....+.. ..... +.+ .||..+....++.. . +.++.. ..+|+..... ....+++||+|++.|
T Consensus 183 ~~~d~ll~H~Fg~---e~~~~-~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn--~R~DL~~~r~--~~~~tlkc~vllvvG 254 (326)
T KOG2931|consen 183 GVKDYLLAHHFGK---EELGN-NSDIVQEYRQHLGERLNPKNLALFLNAYN--GRRDLSIERP--KLGTTLKCPVLLVVG 254 (326)
T ss_pred hHHHHHHHHHhcc---ccccc-cHHHHHHHHHHHHhcCChhHHHHHHHHhc--CCCCccccCC--CcCccccccEEEEec
Confidence 01111111110 01111 111 12221222222211 1 122211 0112111110 001156799999999
Q ss_pred CCCCCCCcchHHHHH-hcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 242 ISDKYLPQSVAEEFQ-KGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 242 ~~D~~~~~~~~~~~~-~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
++.+... ...++. +..|..+++..+.+||=.+++|||+.+.+.++-|+.+
T Consensus 255 d~Sp~~~--~vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP~kl~ea~~~FlqG 305 (326)
T KOG2931|consen 255 DNSPHVS--AVVECNSKLDPTYTTLLKMADCGGLVQEEQPGKLAEAFKYFLQG 305 (326)
T ss_pred CCCchhh--hhhhhhcccCcccceEEEEcccCCcccccCchHHHHHHHHHHcc
Confidence 9998654 344554 4456667999999999999999999999999999976
No 63
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.69 E-value=9.3e-16 Score=128.91 Aligned_cols=258 Identities=19% Similarity=0.252 Sum_probs=133.4
Q ss_pred EEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCcc-chhh-----HHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCC-
Q 022534 16 IKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYS-YRNV-----MSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDF- 88 (295)
Q Consensus 16 ~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~-w~~~-----~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~- 88 (295)
++..-..+++...|+++..+|++|=.|..+.++.+ |..+ +..+.+ .|-++-+|-|||..-..+-+. +|.|
T Consensus 4 v~t~~G~v~V~v~G~~~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~-~f~i~Hi~aPGqe~ga~~~p~--~y~yP 80 (283)
T PF03096_consen 4 VETPYGSVHVTVQGDPKGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQ-NFCIYHIDAPGQEEGAATLPE--GYQYP 80 (283)
T ss_dssp EEETTEEEEEEEESS--TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHT-TSEEEEEE-TTTSTT-----T--T----
T ss_pred eccCceEEEEEEEecCCCCCceEEEeccccccchHHHHHHhcchhHHHHhh-ceEEEEEeCCCCCCCcccccc--ccccc
Confidence 55666778888889877668999999999988876 6543 344554 799999999999975543332 4455
Q ss_pred CHHHHHHHHHHHHHHhCCCCceEEEEecccchHH-HHHHHHhCcCccceeEEEcCCCCCCCCCchhhh-hhhcccchh--
Q 022534 89 TENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSY-GLTWALKNPSRISKLAILNSPLTASSPLPGLFQ-QLRIPLLGE-- 164 (295)
Q Consensus 89 ~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G~~-~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~-~~~~~~~~~-- 164 (295)
|+++++++|.+++++++++. ++-+ |-..|+. =..+|+++|++|.++||+++...... |.+++. ++....+..
T Consensus 81 smd~LAe~l~~Vl~~f~lk~-vIg~--GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~g-w~Ew~~~K~~~~~L~~~g 156 (283)
T PF03096_consen 81 SMDQLAEMLPEVLDHFGLKS-VIGF--GVGAGANILARFALKHPERVLGLILVNPTCTAAG-WMEWFYQKLSSWLLYSYG 156 (283)
T ss_dssp -HHHHHCTHHHHHHHHT----EEEE--EETHHHHHHHHHHHHSGGGEEEEEEES---S----HHHHHHHHHH-------C
T ss_pred CHHHHHHHHHHHHHhCCccE-EEEE--eeccchhhhhhccccCccceeEEEEEecCCCCcc-HHHHHHHHHhcccccccc
Confidence 89999999999999999986 5444 4324554 35789999999999999976444332 222221 111000000
Q ss_pred hh-hhhHHHHHHHHHhCCCccccccccc---cccccccccCCchh--HHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEE
Q 022534 165 FT-AQNAIMAERFIEAGSPYVLKLDKAD---VYRLPYLASSGPGF--ALLEAARKVNFKDISSRIGAGFSSGSWDKPVLV 238 (295)
Q Consensus 165 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~ 238 (295)
.. .....+...++.. .......+ .++.......++.. .+.+.... .++ +.. ..+...||+|+
T Consensus 157 mt~~~~d~Ll~h~Fg~----~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~--R~D----L~~--~~~~~~c~vLl 224 (283)
T PF03096_consen 157 MTSSVKDYLLWHYFGK----EEEENNSDLVQTYRQHLDERINPKNLALFLNSYNS--RTD----LSI--ERPSLGCPVLL 224 (283)
T ss_dssp TTS-HHHHHHHHHS-H----HHHHCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----------S--ECTTCCS-EEE
T ss_pred cccchHHhhhhccccc----ccccccHHHHHHHHHHHhcCCCHHHHHHHHHHHhc--ccc----chh--hcCCCCCCeEE
Confidence 00 0000011111110 00000111 11111111111111 11111110 011 111 12355799999
Q ss_pred EEeCCCCCCCcchHHHHH-hcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHhc
Q 022534 239 AWGISDKYLPQSVAEEFQ-KGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLNY 294 (295)
Q Consensus 239 i~G~~D~~~~~~~~~~~~-~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (295)
+.|++.+... .+.++. +..|...++..+++||=++++|+|+.+++.++-|+.++
T Consensus 225 vvG~~Sp~~~--~vv~~ns~Ldp~~ttllkv~dcGglV~eEqP~klaea~~lFlQG~ 279 (283)
T PF03096_consen 225 VVGDNSPHVD--DVVEMNSKLDPTKTTLLKVADCGGLVLEEQPGKLAEAFKLFLQGM 279 (283)
T ss_dssp EEETTSTTHH--HHHHHHHHS-CCCEEEEEETT-TT-HHHH-HHHHHHHHHHHHHHT
T ss_pred EEecCCcchh--hHHHHHhhcCcccceEEEecccCCcccccCcHHHHHHHHHHHccC
Confidence 9999998643 445565 45666789999999999999999999999999999873
No 64
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.69 E-value=4.4e-15 Score=123.46 Aligned_cols=254 Identities=21% Similarity=0.357 Sum_probs=153.6
Q ss_pred ccceeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCC
Q 022534 10 REYGSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFT 89 (295)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~ 89 (295)
.+.|..++. .--|++..+..++.++||=+||-|+|+..|+.+.+.|.+.|.|+|-+.+||+|.|.++. +..|+
T Consensus 13 ~~~~~~~~~---~a~y~D~~~~gs~~gTVv~~hGsPGSH~DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~----~~~~~ 85 (297)
T PF06342_consen 13 AENGKIVTV---QAVYEDSLPSGSPLGTVVAFHGSPGSHNDFKYIRPPLDEAGIRFIGINYPGFGFTPGYP----DQQYT 85 (297)
T ss_pred cccCceEEE---EEEEEecCCCCCCceeEEEecCCCCCccchhhhhhHHHHcCeEEEEeCCCCCCCCCCCc----ccccC
Confidence 344444443 33456665544456799999999999999999999999999999999999999999754 34677
Q ss_pred HHHHHHHHHHHHHHhCCCCceEEEEecccchH-HHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhh
Q 022534 90 ENEFHEELDKLLDVLEVKYPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQ 168 (295)
Q Consensus 90 ~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (295)
-.+-.+-+..+++.+++++.++.+ |||.|+ -|+.+|..+| +.++++++++-......-.-+.+ ...+..+..
T Consensus 86 n~er~~~~~~ll~~l~i~~~~i~~--gHSrGcenal~la~~~~--~~g~~lin~~G~r~HkgIrp~~r--~~~i~~l~~- 158 (297)
T PF06342_consen 86 NEERQNFVNALLDELGIKGKLIFL--GHSRGCENALQLAVTHP--LHGLVLINPPGLRPHKGIRPLSR--METINYLYD- 158 (297)
T ss_pred hHHHHHHHHHHHHHcCCCCceEEE--EeccchHHHHHHHhcCc--cceEEEecCCccccccCcCHHHH--HHHHHHHHH-
Confidence 788999999999999998776666 778775 6788888886 56999998766544321110111 111100000
Q ss_pred hHHHHHHHHHhCCCccccccccccccc-cccccCCchhHHHHHH---HhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCC
Q 022534 169 NAIMAERFIEAGSPYVLKLDKADVYRL-PYLASSGPGFALLEAA---RKVNFKDISSRIGAGFSSGSWDKPVLVAWGISD 244 (295)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D 244 (295)
+..+++... ++ ...++. .+..+ .|.....++ ..+++......+.. .++-++|+++++|.+|
T Consensus 159 ---~lp~~~~~~---i~----~~~y~~iG~KV~--~GeeA~na~r~m~~~df~~q~~~I~~---ln~~~ikvli~ygg~D 223 (297)
T PF06342_consen 159 ---LLPRFIINA---IM----YFYYRMIGFKVS--DGEEAINAMRSMQNCDFEEQKEYIDK---LNKKPIKVLIAYGGKD 223 (297)
T ss_pred ---HhhHHHHHH---HH----HHHHHHhCeeec--ChHHHHHHHHHHHhcCHHHHHHHHHH---hccCCCcEEEEEcCcc
Confidence 000011000 00 000000 00001 112222222 22333333332221 1133599999999999
Q ss_pred CCCCcchHHHHHhcCCC--------------------------CeEEEEecCCCCCCCCCChHHHHHHHHHHHH
Q 022534 245 KYLPQSVAEEFQKGNPN--------------------------VVKLQMIEGAGHMPQEDWPEKVVDGLRYFFL 292 (295)
Q Consensus 245 ~~~~~~~~~~~~~~~~~--------------------------~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 292 (295)
.++..+...++++.... .-..+.+.+-||+.+-.+++-+++++.+.|+
T Consensus 224 hLIEeeI~~E~a~~f~~l~Hf~~~~~~seee~~kI~~~f~~~~~~~sv~f~~dgHf~qK~~A~lIA~~i~~mfe 297 (297)
T PF06342_consen 224 HLIEEEISFEFAMKFKGLDHFNIEKEISEEEKPKILKSFASGQKGASVFFAKDGHFQQKFRADLIAEAIKKMFE 297 (297)
T ss_pred hhhHHHHHHHHHHHhCCccceeeecCCChhHHHHHHHHHhcCCceeEEEEecCChHHhHHHHHHHHHHHHHhhC
Confidence 99876666554332211 1234667777888888888888888877653
No 65
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.67 E-value=2.1e-16 Score=108.98 Aligned_cols=79 Identities=20% Similarity=0.378 Sum_probs=67.7
Q ss_pred cEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q 022534 20 EYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDK 99 (295)
Q Consensus 20 ~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~ 99 (295)
|++++++.+-+.++++++|+++||+++++..|.++++.|++.||.|+++|+||||+|+..+... -+.+++++|+..
T Consensus 1 G~~L~~~~w~p~~~~k~~v~i~HG~~eh~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg~~----~~~~~~v~D~~~ 76 (79)
T PF12146_consen 1 GTKLFYRRWKPENPPKAVVVIVHGFGEHSGRYAHLAEFLAEQGYAVFAYDHRGHGRSEGKRGHI----DSFDDYVDDLHQ 76 (79)
T ss_pred CcEEEEEEecCCCCCCEEEEEeCCcHHHHHHHHHHHHHHHhCCCEEEEECCCcCCCCCCccccc----CCHHHHHHHHHH
Confidence 5788999998766567899999999999999999999999999999999999999999754332 256789999988
Q ss_pred HHH
Q 022534 100 LLD 102 (295)
Q Consensus 100 ~~~ 102 (295)
+++
T Consensus 77 ~~~ 79 (79)
T PF12146_consen 77 FIQ 79 (79)
T ss_pred HhC
Confidence 864
No 66
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.66 E-value=1.5e-15 Score=129.16 Aligned_cols=121 Identities=15% Similarity=0.145 Sum_probs=83.6
Q ss_pred eeEEeCcEEEEEEEcCC-CCCCCceEEEEcCCCCCC----ccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCC
Q 022534 14 SYIKSGEYRWFVRETGS-ADSRLGTIVFLHGAPSHS----YSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDF 88 (295)
Q Consensus 14 ~~~~~~~~~~~~~~~g~-~~~~~~~vv~lHG~~~~~----~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~ 88 (295)
.|++.....++.....+ +++++++|||+||++++. ..|..+++.|++.||+|+++|+||||.|+.... .+
T Consensus 3 ~~l~~~~g~~~~~~~~p~~~~~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~-----~~ 77 (266)
T TIGR03101 3 FFLDAPHGFRFCLYHPPVAVGPRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFA-----AA 77 (266)
T ss_pred EEecCCCCcEEEEEecCCCCCCceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCccc-----cC
Confidence 45555433333322222 223357899999998643 457778899988899999999999999986432 12
Q ss_pred CHHHHHHHHHHHHH---HhCCCCceEEEEecccchH-HHHHHHHhCcCccceeEEEcC
Q 022534 89 TENEFHEELDKLLD---VLEVKYPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNS 142 (295)
Q Consensus 89 ~~~~~~~~l~~~~~---~l~~~~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~ 142 (295)
+.+.+.+|+..+++ +.+.+ +++++ |+|+|+ +++.+|.++|++++++|++++
T Consensus 78 ~~~~~~~Dv~~ai~~L~~~~~~-~v~Lv--G~SmGG~vAl~~A~~~p~~v~~lVL~~P 132 (266)
T TIGR03101 78 RWDVWKEDVAAAYRWLIEQGHP-PVTLW--GLRLGALLALDAANPLAAKCNRLVLWQP 132 (266)
T ss_pred CHHHHHHHHHHHHHHHHhcCCC-CEEEE--EECHHHHHHHHHHHhCccccceEEEecc
Confidence 45667777766544 44444 56776 777765 677788899999999999853
No 67
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.64 E-value=5e-15 Score=114.81 Aligned_cols=144 Identities=25% Similarity=0.424 Sum_probs=102.8
Q ss_pred eEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEEEEec
Q 022534 37 TIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQG 116 (295)
Q Consensus 37 ~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G 116 (295)
+||++||++++...|..+++.|++.||.|+.+|+||+|.+... ++..+.++.+.+.....+++.++ |
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~i~l~--G 67 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAEQGYAVVAFDYPGHGDSDGA-----------DAVERVLADIRAGYPDPDRIILI--G 67 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHHTTEEEEEESCTTSTTSHHS-----------HHHHHHHHHHHHHHCTCCEEEEE--E
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEecCCCCccchh-----------HHHHHHHHHHHhhcCCCCcEEEE--E
Confidence 5899999999999999999999999999999999999998421 12222222222222222346666 7
Q ss_pred ccchH-HHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHHhCCCccccccccccccc
Q 022534 117 FLVGS-YGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRL 195 (295)
Q Consensus 117 ~~~G~-~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (295)
||+|+ ++..++.+. .++++++++++ + +.. +.
T Consensus 68 ~S~Gg~~a~~~~~~~-~~v~~~v~~~~-~------~~~--------------------~~-------------------- 99 (145)
T PF12695_consen 68 HSMGGAIAANLAARN-PRVKAVVLLSP-Y------PDS--------------------ED-------------------- 99 (145)
T ss_dssp ETHHHHHHHHHHHHS-TTESEEEEESE-S------SGC--------------------HH--------------------
T ss_pred EccCcHHHHHHhhhc-cceeEEEEecC-c------cch--------------------hh--------------------
Confidence 77765 566666777 78999998853 1 000 00
Q ss_pred cccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCC
Q 022534 196 PYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHM 274 (295)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~ 274 (295)
+ .+.++|+++++|++|..++++..+++.+.++...+++++++++|+
T Consensus 100 -----------~----------------------~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 100 -----------L----------------------AKIRIPVLFIHGENDPLVPPEQVRRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp -----------H----------------------TTTTSEEEEEEETT-SSSHHHHHHHHHHHHCSSEEEEEETTS-TT
T ss_pred -----------h----------------------hccCCcEEEEEECCCCcCCHHHHHHHHHHcCCCcEEEEeCCCcCc
Confidence 0 023579999999999999998889988877766899999999995
No 68
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.61 E-value=2.2e-14 Score=117.78 Aligned_cols=192 Identities=18% Similarity=0.299 Sum_probs=124.0
Q ss_pred CCCCCCCceEEEEcCCCCCCccchhhHHHhhh-CCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH----H
Q 022534 29 GSADSRLGTIVFLHGAPSHSYSYRNVMSQMSD-AGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLD----V 103 (295)
Q Consensus 29 g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~-~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~----~ 103 (295)
.++....+++++.||...+...-..+.-.|.. -+++++.+|..|+|.|.+..... ....|+.++-+ .
T Consensus 54 ~~~~~~~~~lly~hGNa~Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE~--------n~y~Di~avye~Lr~~ 125 (258)
T KOG1552|consen 54 RPPEAAHPTLLYSHGNAADLGQMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSER--------NLYADIKAVYEWLRNR 125 (258)
T ss_pred cCccccceEEEEcCCcccchHHHHHHHHHHhhcccceEEEEecccccccCCCcccc--------cchhhHHHHHHHHHhh
Confidence 33444458999999997666643333344433 27899999999999999865332 22334444333 3
Q ss_pred hCCCCceEEEEecccchHH-HHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHHhCCC
Q 022534 104 LEVKYPFFLVVQGFLVGSY-GLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSP 182 (295)
Q Consensus 104 l~~~~~~~lv~~G~~~G~~-~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (295)
.|-+..++|. |+|+|+. .+.+|.++| ++++||. +|..... + .+-....
T Consensus 126 ~g~~~~Iil~--G~SiGt~~tv~Lasr~~--~~alVL~-SPf~S~~---------r-----------------v~~~~~~ 174 (258)
T KOG1552|consen 126 YGSPERIILY--GQSIGTVPTVDLASRYP--LAAVVLH-SPFTSGM---------R-----------------VAFPDTK 174 (258)
T ss_pred cCCCceEEEE--EecCCchhhhhHhhcCC--cceEEEe-ccchhhh---------h-----------------hhccCcc
Confidence 3423456666 7788865 467889998 8888877 4553210 0 0000000
Q ss_pred ccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCC
Q 022534 183 YVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNV 262 (295)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~ 262 (295)
.. +.. +. +. ..+++ +.++||+|++||++|.+++......+.+..++.
T Consensus 175 -------~~-~~~-------------d~-----f~-~i~kI------~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~ 221 (258)
T KOG1552|consen 175 -------TT-YCF-------------DA-----FP-NIEKI------SKITCPVLIIHGTDDEVVDFSHGKALYERCKEK 221 (258)
T ss_pred -------eE-Eee-------------cc-----cc-ccCcc------eeccCCEEEEecccCceecccccHHHHHhcccc
Confidence 00 000 00 00 01122 267899999999999999999999999998875
Q ss_pred eEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 263 VKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 263 ~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
.+-.++.|+||.- +|...++.+.++.|+..
T Consensus 222 ~epl~v~g~gH~~-~~~~~~yi~~l~~f~~~ 251 (258)
T KOG1552|consen 222 VEPLWVKGAGHND-IELYPEYIEHLRRFISS 251 (258)
T ss_pred CCCcEEecCCCcc-cccCHHHHHHHHHHHHH
Confidence 6889999999984 56666677888888864
No 69
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.56 E-value=3.8e-14 Score=121.06 Aligned_cols=122 Identities=23% Similarity=0.360 Sum_probs=94.0
Q ss_pred eEEeCcEEEEEEEcCCCCCC----CceEEEEcCCCCCCccchhhHHHhhhC---------CCeEEEeCCCCCCCCCCCCC
Q 022534 15 YIKSGEYRWFVRETGSADSR----LGTIVFLHGAPSHSYSYRNVMSQMSDA---------GFHCFAPDWLGFGFSDKPEK 81 (295)
Q Consensus 15 ~~~~~~~~~~~~~~g~~~~~----~~~vv~lHG~~~~~~~w~~~~~~l~~~---------~~~via~Dl~G~G~S~~~~~ 81 (295)
..+..|.+||+-..-+++.+ --|+|++|||+++.+.|..+++.|..- -|.||+|.+||||.|+++..
T Consensus 128 kTeIeGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk 207 (469)
T KOG2565|consen 128 KTEIEGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSK 207 (469)
T ss_pred hhhhcceeEEEEEecCCccccCCcccceEEecCCCchHHHHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCcc
Confidence 34568999998665443211 248999999999999999999988632 38899999999999998753
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCCceEEEEecccchHH-HHHHHHhCcCccceeEEEcCC
Q 022534 82 GYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSY-GLTWALKNPSRISKLAILNSP 143 (295)
Q Consensus 82 ~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G~~-~~~~a~~~p~~v~~lil~~~p 143 (295)
. .+.....+..+..++=++|.++ +++ +|..+||+ |..+|..||++|.++-+..|+
T Consensus 208 ~----GFn~~a~ArvmrkLMlRLg~nk-ffi--qGgDwGSiI~snlasLyPenV~GlHlnm~~ 263 (469)
T KOG2565|consen 208 T----GFNAAATARVMRKLMLRLGYNK-FFI--QGGDWGSIIGSNLASLYPENVLGLHLNMCF 263 (469)
T ss_pred C----CccHHHHHHHHHHHHHHhCcce-eEe--ecCchHHHHHHHHHhhcchhhhHhhhcccc
Confidence 2 2355678889999999999986 555 35468884 778888999999999865443
No 70
>PRK11460 putative hydrolase; Provisional
Probab=99.56 E-value=1.1e-13 Score=116.12 Aligned_cols=179 Identities=16% Similarity=0.130 Sum_probs=108.4
Q ss_pred CCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCC-CCCC-----CCCCCH---HHHH----HHHHH
Q 022534 33 SRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPE-KGYD-----DFDFTE---NEFH----EELDK 99 (295)
Q Consensus 33 ~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~-~~~~-----~~~~~~---~~~~----~~l~~ 99 (295)
++++.|||+||++++...|..+++.|...++.+..++.+|...+.... ..+. ...... .... +.+..
T Consensus 14 ~~~~~vIlLHG~G~~~~~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i~~ 93 (232)
T PRK11460 14 PAQQLLLLFHGVGDNPVAMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETVRY 93 (232)
T ss_pred CCCcEEEEEeCCCCChHHHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHHHH
Confidence 346789999999999999999999998655556666666664332110 0000 000111 1222 22333
Q ss_pred HHHHhCCC-CceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHH
Q 022534 100 LLDVLEVK-YPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFI 177 (295)
Q Consensus 100 ~~~~l~~~-~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (295)
+.++.+++ +.++++ |+|.| .+++.+++++|+.+.+++.+++ .. +.
T Consensus 94 ~~~~~~~~~~~i~l~--GfS~Gg~~al~~a~~~~~~~~~vv~~sg-~~-----~~------------------------- 140 (232)
T PRK11460 94 WQQQSGVGASATALI--GFSQGAIMALEAVKAEPGLAGRVIAFSG-RY-----AS------------------------- 140 (232)
T ss_pred HHHhcCCChhhEEEE--EECHHHHHHHHHHHhCCCcceEEEEecc-cc-----cc-------------------------
Confidence 33344443 235565 77776 4677778889987776665532 00 00
Q ss_pred HhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHh
Q 022534 178 EAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQK 257 (295)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~ 257 (295)
.+ . .. ..+.|+++++|++|+++|.+.+.++.+
T Consensus 141 ---~~--------------~-------------------~~------------~~~~pvli~hG~~D~vvp~~~~~~~~~ 172 (232)
T PRK11460 141 ---LP--------------E-------------------TA------------PTATTIHLIHGGEDPVIDVAHAVAAQE 172 (232)
T ss_pred ---cc--------------c-------------------cc------------cCCCcEEEEecCCCCccCHHHHHHHHH
Confidence 00 0 00 115899999999999999888877665
Q ss_pred cC---CCCeEEEEecCCCCCCCCCChHHHHHHHHHHHH
Q 022534 258 GN---PNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFL 292 (295)
Q Consensus 258 ~~---~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 292 (295)
.+ ...+++++++++||....+.-+.+.+-+.+++.
T Consensus 173 ~L~~~g~~~~~~~~~~~gH~i~~~~~~~~~~~l~~~l~ 210 (232)
T PRK11460 173 ALISLGGDVTLDIVEDLGHAIDPRLMQFALDRLRYTVP 210 (232)
T ss_pred HHHHCCCCeEEEEECCCCCCCCHHHHHHHHHHHHHHcc
Confidence 43 234688999999999865555555555555443
No 71
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.51 E-value=8.1e-12 Score=107.68 Aligned_cols=130 Identities=18% Similarity=0.240 Sum_probs=80.3
Q ss_pred cceeeEEeCcEEEEEEEcCCC---CCCCceEEEEcCCCCCCccchhh--HHHhh-hCCCeEEEeCC--CCCCCCCCCCC-
Q 022534 11 EYGSYIKSGEYRWFVRETGSA---DSRLGTIVFLHGAPSHSYSYRNV--MSQMS-DAGFHCFAPDW--LGFGFSDKPEK- 81 (295)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~g~~---~~~~~~vv~lHG~~~~~~~w~~~--~~~l~-~~~~~via~Dl--~G~G~S~~~~~- 81 (295)
.+..+...-+..+.|..+.++ ..+.|+|+|+||++++...|... +..++ +.||.|++||. +|+|.|.....
T Consensus 15 ~~~~~s~~~~~~~~~~v~~P~~~~~~~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w 94 (275)
T TIGR02821 15 FYRHKSETCGVPMTFGVFLPPQAAAGPVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAW 94 (275)
T ss_pred EEEEeccccCCceEEEEEcCCCccCCCCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccc
Confidence 344445555556555555432 23358999999999998888543 34454 45899999998 66664432100
Q ss_pred ------C-C-------CCCCCCHHH-HHHHHHHHHHH-hCCC-CceEEEEecccchH-HHHHHHHhCcCccceeEEEcC
Q 022534 82 ------G-Y-------DDFDFTENE-FHEELDKLLDV-LEVK-YPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNS 142 (295)
Q Consensus 82 ------~-~-------~~~~~~~~~-~~~~l~~~~~~-l~~~-~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~ 142 (295)
. + ....+...+ +++++..++++ ++++ +.+.++ |+|+|+ +++.+++++|+.+++++++++
T Consensus 95 ~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--G~S~GG~~a~~~a~~~p~~~~~~~~~~~ 171 (275)
T TIGR02821 95 DFGKGAGFYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGIT--GHSMGGHGALVIALKNPDRFKSVSAFAP 171 (275)
T ss_pred cccCCccccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEE--EEChhHHHHHHHHHhCcccceEEEEECC
Confidence 0 0 000123233 46778888876 2332 235555 777764 677888899999999988753
No 72
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.50 E-value=1.6e-12 Score=112.26 Aligned_cols=268 Identities=21% Similarity=0.263 Sum_probs=148.8
Q ss_pred cEEEEEEEcCCCCC-CCceEEEEcCCCCCCc-----------cchhhHHH---hhhCCCeEEEeCCCCCC-CCCCCCCCC
Q 022534 20 EYRWFVRETGSADS-RLGTIVFLHGAPSHSY-----------SYRNVMSQ---MSDAGFHCFAPDWLGFG-FSDKPEKGY 83 (295)
Q Consensus 20 ~~~~~~~~~g~~~~-~~~~vv~lHG~~~~~~-----------~w~~~~~~---l~~~~~~via~Dl~G~G-~S~~~~~~~ 83 (295)
+..+-|+.+|.-.. ....||++|++.+++. .|..++.. +....|-||+.|-.|.+ .|+.|....
T Consensus 35 ~~~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~ 114 (368)
T COG2021 35 DARVAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSIN 114 (368)
T ss_pred CcEEEEEecccccccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcC
Confidence 47888899986332 2347999999987442 45555422 44457999999999998 666543221
Q ss_pred CC--------CCCCHHHHHHHHHHHHHHhCCCCceEEEEecccchHHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhh
Q 022534 84 DD--------FDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQ 155 (295)
Q Consensus 84 ~~--------~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~ 155 (295)
.. ..+++.|.++.-..++++||+++ +..|.+|.+||+-++.|+..|||+|.+++.++++......... +.
T Consensus 115 p~g~~yg~~FP~~ti~D~V~aq~~ll~~LGI~~-l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s~~~ia-~~ 192 (368)
T COG2021 115 PGGKPYGSDFPVITIRDMVRAQRLLLDALGIKK-LAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLSAQNIA-FN 192 (368)
T ss_pred CCCCccccCCCcccHHHHHHHHHHHHHhcCcce-EeeeeccChHHHHHHHHHHhChHHHhhhheecccccCCHHHHH-HH
Confidence 11 24688899988899999999997 4434344334456899999999999999988764432111000 00
Q ss_pred hhhc------c-c--------------------chhhhhhhH-HHHHHHHHhC--CCcccc--ccccccc-cc---cccc
Q 022534 156 QLRI------P-L--------------------LGEFTAQNA-IMAERFIEAG--SPYVLK--LDKADVY-RL---PYLA 199 (295)
Q Consensus 156 ~~~~------~-~--------------------~~~~~~~~~-~~~~~~~~~~--~~~~~~--~~~~~~~-~~---~~~~ 199 (295)
.... | + +..++.... .+.++|-... .+.... ....+.| +. .+..
T Consensus 193 ~~~r~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~~~~~~~~f~vESYL~~qg~kf~~ 272 (368)
T COG2021 193 EVQRQAIEADPDWNGGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQADPLRGGGVRFAVESYLDYQGDKFVA 272 (368)
T ss_pred HHHHHHHHhCCCccCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcccccccccCCCchhHHHHHHHHHHHHHHHh
Confidence 0000 0 0 000001100 0111111000 000000 0000000 00 0000
Q ss_pred cCCc-hhHHHHHHHhcchhhhh---HhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEE-EEecCCCCC
Q 022534 200 SSGP-GFALLEAARKVNFKDIS---SRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKL-QMIEGAGHM 274 (295)
Q Consensus 200 ~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~-~~i~~~gH~ 274 (295)
.-++ .+.+. .+..+..|.. ..+... .+++++|+|++.-+.|+..|++....+.+.++....+ ++-...||-
T Consensus 273 rfDaNsYL~l--t~ald~~D~s~~~~~l~~a--l~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~~~~i~S~~GHD 348 (368)
T COG2021 273 RFDANSYLYL--TRALDYHDVSRGRGDLTAA--LARIKAPVLVVGITSDWLFPPELQRALAEALPAAGALREIDSPYGHD 348 (368)
T ss_pred ccCcchHHHH--HHHHHhcCCCCCcCcHHHH--HhcCccCEEEEEecccccCCHHHHHHHHHhccccCceEEecCCCCch
Confidence 0000 00000 0001111100 000000 2368899999999999999999999999888863225 566678999
Q ss_pred CCCCChHHHHHHHHHHHHh
Q 022534 275 PQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 275 ~~~e~p~~~~~~i~~fl~~ 293 (295)
..+...+.+...|++||..
T Consensus 349 aFL~e~~~~~~~i~~fL~~ 367 (368)
T COG2021 349 AFLVESEAVGPLIRKFLAL 367 (368)
T ss_pred hhhcchhhhhHHHHHHhhc
Confidence 8888888899999999975
No 73
>PLN02442 S-formylglutathione hydrolase
Probab=99.49 E-value=4.4e-12 Score=109.72 Aligned_cols=107 Identities=20% Similarity=0.314 Sum_probs=67.1
Q ss_pred CCceEEEEcCCCCCCccchh---hHHHhhhCCCeEEEeCCCCCC-----CCCC-------------CCCC---CCCCCCC
Q 022534 34 RLGTIVFLHGAPSHSYSYRN---VMSQMSDAGFHCFAPDWLGFG-----FSDK-------------PEKG---YDDFDFT 89 (295)
Q Consensus 34 ~~~~vv~lHG~~~~~~~w~~---~~~~l~~~~~~via~Dl~G~G-----~S~~-------------~~~~---~~~~~~~ 89 (295)
+.|+|+|+||++++...|.. +...++..||.|++||.+++| .++. .... +.-.+|-
T Consensus 46 ~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (283)
T PLN02442 46 KVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYDYV 125 (283)
T ss_pred CCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceeeccccCCCcccchhhhH
Confidence 46899999999887777743 335556669999999998877 1110 0000 0000112
Q ss_pred HHHHHHHHHHHHHHhCCCCceEEEEecccchH-HHHHHHHhCcCccceeEEEcCC
Q 022534 90 ENEFHEELDKLLDVLEVKYPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNSP 143 (295)
Q Consensus 90 ~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~p 143 (295)
.+++...+....+.++.++ ++++ |+|+|+ .++.++.++|+++++++.+++.
T Consensus 126 ~~~l~~~i~~~~~~~~~~~-~~i~--G~S~GG~~a~~~a~~~p~~~~~~~~~~~~ 177 (283)
T PLN02442 126 VKELPKLLSDNFDQLDTSR-ASIF--GHSMGGHGALTIYLKNPDKYKSVSAFAPI 177 (283)
T ss_pred HHHHHHHHHHHHHhcCCCc-eEEE--EEChhHHHHHHHHHhCchhEEEEEEECCc
Confidence 2334444444444456554 5555 777765 5677888999999998887543
No 74
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.48 E-value=5.2e-12 Score=100.58 Aligned_cols=206 Identities=25% Similarity=0.346 Sum_probs=119.3
Q ss_pred ceEEEEcCCCCCCcc--chhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC-CCC--ce
Q 022534 36 GTIVFLHGAPSHSYS--YRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLE-VKY--PF 110 (295)
Q Consensus 36 ~~vv~lHG~~~~~~~--w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~-~~~--~~ 110 (295)
..+|++||+-++... ...++..|++.|+.++-+|.+|-|.|+..-. +-+|. ..++|+..+++.+. .+. ++
T Consensus 34 e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~-~Gn~~----~eadDL~sV~q~~s~~nr~v~v 108 (269)
T KOG4667|consen 34 EIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFY-YGNYN----TEADDLHSVIQYFSNSNRVVPV 108 (269)
T ss_pred eEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccc-cCccc----chHHHHHHHHHHhccCceEEEE
Confidence 489999999775543 4577778888899999999999999996421 11222 34588888888763 232 23
Q ss_pred EEEEecccchH-HHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHHhCCCccccccc
Q 022534 111 FLVVQGFLVGS-YGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDK 189 (295)
Q Consensus 111 ~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (295)
++ |||-|+ .+..+|.++++ +..++-++.-++......+. . ++. ..++..+.+. +.....
T Consensus 109 i~---gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl~~~I~eR---l-----g~~------~l~~ike~Gf--id~~~r 168 (269)
T KOG4667|consen 109 IL---GHSKGGDVVLLYASKYHD-IRNVINCSGRYDLKNGINER---L-----GED------YLERIKEQGF--IDVGPR 168 (269)
T ss_pred EE---eecCccHHHHHHHHhhcC-chheEEcccccchhcchhhh---h-----ccc------HHHHHHhCCc--eecCcc
Confidence 33 788664 56789999988 56555443323221111000 0 000 0011111110 000000
Q ss_pred cccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEec
Q 022534 190 ADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIE 269 (295)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~ 269 (295)
..-+ ++.. ....+.+.+. .+.......| ..+||+|-+||..|.++|.+.+.+|++.+++ .++.+||
T Consensus 169 kG~y--~~rv---t~eSlmdrLn-td~h~aclkI-------d~~C~VLTvhGs~D~IVPve~AkefAk~i~n-H~L~iIE 234 (269)
T KOG4667|consen 169 KGKY--GYRV---TEESLMDRLN-TDIHEACLKI-------DKQCRVLTVHGSEDEIVPVEDAKEFAKIIPN-HKLEIIE 234 (269)
T ss_pred cCCc--Ccee---cHHHHHHHHh-chhhhhhcCc-------CccCceEEEeccCCceeechhHHHHHHhccC-CceEEec
Confidence 0000 0000 0011111111 1111111112 3489999999999999999999999999998 7999999
Q ss_pred CCCCCCCCCCh
Q 022534 270 GAGHMPQEDWP 280 (295)
Q Consensus 270 ~~gH~~~~e~p 280 (295)
||-|.....+-
T Consensus 235 gADHnyt~~q~ 245 (269)
T KOG4667|consen 235 GADHNYTGHQS 245 (269)
T ss_pred CCCcCccchhh
Confidence 99998755443
No 75
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.47 E-value=2.9e-12 Score=108.98 Aligned_cols=258 Identities=20% Similarity=0.240 Sum_probs=125.8
Q ss_pred CcEEEEEEEcCCCCCCCceEEEEcCCCCCCcc-c-hhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q 022534 19 GEYRWFVRETGSADSRLGTIVFLHGAPSHSYS-Y-RNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEE 96 (295)
Q Consensus 19 ~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~-w-~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~ 96 (295)
+|........-+.++.+|.||++||+.+++.+ | +.++..+.++||.|+++|.||||++....+.. |+ .....|
T Consensus 59 g~~~~ldw~~~p~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~----yh-~G~t~D 133 (345)
T COG0429 59 GGFIDLDWSEDPRAAKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSPRL----YH-SGETED 133 (345)
T ss_pred CCEEEEeeccCccccCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCcce----ec-ccchhH
Confidence 34444333323344456899999999766654 3 35667787889999999999999998754332 11 233466
Q ss_pred HHHHHHHh---CCCCceEEEEecccch-HHHHHH-HHhCcC-ccceeEEEcCCCCCCCCCch---hhh-hhhcccchhhh
Q 022534 97 LDKLLDVL---EVKYPFFLVVQGFLVG-SYGLTW-ALKNPS-RISKLAILNSPLTASSPLPG---LFQ-QLRIPLLGEFT 166 (295)
Q Consensus 97 l~~~~~~l---~~~~~~~lv~~G~~~G-~~~~~~-a~~~p~-~v~~lil~~~p~~~~~~~~~---~~~-~~~~~~~~~~~ 166 (295)
+..+++.+ ..+.|+..+ |.|.| ++-+.+ +.+..+ .+.+-+.+++|.+...-... .+. ++..+.+.+..
T Consensus 134 ~~~~l~~l~~~~~~r~~~av--G~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~~~~~l~~~~s~~ly~r~l~~~L 211 (345)
T COG0429 134 IRFFLDWLKARFPPRPLYAV--GFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEACAYRLDSGFSLRLYSRYLLRNL 211 (345)
T ss_pred HHHHHHHHHHhCCCCceEEE--EecccHHHHHHHHHhhccCcccceeeeeeCHHHHHHHHHHhcCchhhhhhHHHHHHHH
Confidence 66666654 456666655 77665 342333 332211 34455555566543110000 000 11000001110
Q ss_pred hhhHH-HHHHHHHhCCCcc-ccccccccccccccccCCchhHHHHHHHhcchhhhhHhhh---cCcCCCCCCCcEEEEEe
Q 022534 167 AQNAI-MAERFIEAGSPYV-LKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIG---AGFSSGSWDKPVLVAWG 241 (295)
Q Consensus 167 ~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~P~l~i~G 241 (295)
.++.. ....+ ....+.. .... +...+. .++.-.-.+....+++..+... ......+|.+|+|+|+.
T Consensus 212 ~~~~~~kl~~l-~~~~p~~~~~~i-k~~~ti-------~eFD~~~Tap~~Gf~da~dYYr~aSs~~~L~~Ir~PtLii~A 282 (345)
T COG0429 212 KRNAARKLKEL-EPSLPGTVLAAI-KRCRTI-------REFDDLLTAPLHGFADAEDYYRQASSLPLLPKIRKPTLIINA 282 (345)
T ss_pred HHHHHHHHHhc-CcccCcHHHHHH-HhhchH-------HhccceeeecccCCCcHHHHHHhccccccccccccceEEEec
Confidence 00000 00000 0000000 0000 000000 0000000000011222222111 11113478999999999
Q ss_pred CCCCCCCcchHHHHHh-cCCCCeEEEEecCCCCCCCCC----ChH-HHHHHHHHHHHh
Q 022534 242 ISDKYLPQSVAEEFQK-GNPNVVKLQMIEGAGHMPQED----WPE-KVVDGLRYFFLN 293 (295)
Q Consensus 242 ~~D~~~~~~~~~~~~~-~~~~~~~~~~i~~~gH~~~~e----~p~-~~~~~i~~fl~~ 293 (295)
.+||+++++...+... ..|+ +.+.+-+..||.-.+. +|. =.-+.|.+|++.
T Consensus 283 ~DDP~~~~~~iP~~~~~~np~-v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~ 339 (345)
T COG0429 283 KDDPFMPPEVIPKLQEMLNPN-VLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDP 339 (345)
T ss_pred CCCCCCChhhCCcchhcCCCc-eEEEeecCCceEEeccCccccchhhHHHHHHHHHHH
Confidence 9999999877766655 5554 8999999999987666 332 233455555544
No 76
>PLN00021 chlorophyllase
Probab=99.44 E-value=5.3e-12 Score=110.21 Aligned_cols=96 Identities=21% Similarity=0.284 Sum_probs=64.1
Q ss_pred CceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHH---HHHHHHHHHHH-------h
Q 022534 35 LGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENE---FHEELDKLLDV-------L 104 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~---~~~~l~~~~~~-------l 104 (295)
.|+|||+||++.+...|..+++.|++.||.|+++|++|++.+... ..+++ ..+.+.+.++. .
T Consensus 52 ~PvVv~lHG~~~~~~~y~~l~~~Las~G~~VvapD~~g~~~~~~~--------~~i~d~~~~~~~l~~~l~~~l~~~~~~ 123 (313)
T PLN00021 52 YPVLLFLHGYLLYNSFYSQLLQHIASHGFIVVAPQLYTLAGPDGT--------DEIKDAAAVINWLSSGLAAVLPEGVRP 123 (313)
T ss_pred CCEEEEECCCCCCcccHHHHHHHHHhCCCEEEEecCCCcCCCCch--------hhHHHHHHHHHHHHhhhhhhccccccc
Confidence 579999999999999999999999988999999999997543211 01222 22222222221 1
Q ss_pred CCCCceEEEEecccch-HHHHHHHHhCcC-----ccceeEEEc
Q 022534 105 EVKYPFFLVVQGFLVG-SYGLTWALKNPS-----RISKLAILN 141 (295)
Q Consensus 105 ~~~~~~~lv~~G~~~G-~~~~~~a~~~p~-----~v~~lil~~ 141 (295)
+.+ .+.++ |||+| .+++.+|.++|+ +++++++++
T Consensus 124 d~~-~v~l~--GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ld 163 (313)
T PLN00021 124 DLS-KLALA--GHSRGGKTAFALALGKAAVSLPLKFSALIGLD 163 (313)
T ss_pred Chh-heEEE--EECcchHHHHHHHhhccccccccceeeEEeec
Confidence 223 35666 77765 567788888775 567777664
No 77
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.44 E-value=4.1e-12 Score=121.15 Aligned_cols=236 Identities=18% Similarity=0.158 Sum_probs=132.0
Q ss_pred cccceeeEEeCcEEEEEEEcCCCCCC----CceEEEEcCCCCCCc--cchhhHHHhhhCCCeEEEeCCCCCCCCC-----
Q 022534 9 GREYGSYIKSGEYRWFVRETGSADSR----LGTIVFLHGAPSHSY--SYRNVMSQMSDAGFHCFAPDWLGFGFSD----- 77 (295)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~g~~~~~----~~~vv~lHG~~~~~~--~w~~~~~~l~~~~~~via~Dl~G~G~S~----- 77 (295)
.+|.-++-..+|..++.....+++.. -|.||++||.|.... .|...+..|+.+||-|++++.||-+.-.
T Consensus 364 ~~e~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~ 443 (620)
T COG1506 364 EPEPVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGREFAD 443 (620)
T ss_pred CceEEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHHHHH
Confidence 34555555557888888777654322 278999999985443 4667778888889999999999665532
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHhCC-C-CceEEEEecccchHHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhh
Q 022534 78 KPEKGYDDFDFTENEFHEELDKLLDVLEV-K-YPFFLVVQGFLVGSYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQ 155 (295)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~l~~~~~~l~~-~-~~~~lv~~G~~~G~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~ 155 (295)
.....+ + ....+|+.+.+. ++++.+. + +.+.+ .|+|-|++...+++.+-+++++.+...++..-. ..+.
T Consensus 444 ~~~~~~-g-~~~~~D~~~~~~-~l~~~~~~d~~ri~i--~G~SyGGymtl~~~~~~~~f~a~~~~~~~~~~~----~~~~ 514 (620)
T COG1506 444 AIRGDW-G-GVDLEDLIAAVD-ALVKLPLVDPERIGI--TGGSYGGYMTLLAATKTPRFKAAVAVAGGVDWL----LYFG 514 (620)
T ss_pred hhhhcc-C-CccHHHHHHHHH-HHHhCCCcChHHeEE--eccChHHHHHHHHHhcCchhheEEeccCcchhh----hhcc
Confidence 111111 0 112355555555 4444443 2 12333 377766654555554433677666543322100 0000
Q ss_pred hhhcccchhhhhhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCc
Q 022534 156 QLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKP 235 (295)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 235 (295)
....++.. ..+... ..+.- . ...+.. .. -.. ...++++|
T Consensus 515 ~~~~~~~~--------~~~~~~--~~~~~----~---------------~~~~~~---~s---p~~------~~~~i~~P 553 (620)
T COG1506 515 ESTEGLRF--------DPEENG--GGPPE----D---------------REKYED---RS---PIF------YADNIKTP 553 (620)
T ss_pred ccchhhcC--------CHHHhC--CCccc----C---------------hHHHHh---cC---hhh------hhcccCCC
Confidence 00000000 000000 00000 0 000000 00 000 11367899
Q ss_pred EEEEEeCCCCCCCcchHHHHHhcC---CCCeEEEEecCCCCCCCC-CChHHHHHHHHHHHHhc
Q 022534 236 VLVAWGISDKYLPQSVAEEFQKGN---PNVVKLQMIEGAGHMPQE-DWPEKVVDGLRYFFLNY 294 (295)
Q Consensus 236 ~l~i~G~~D~~~~~~~~~~~~~~~---~~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~~ 294 (295)
+|+|||++|.-++.+.+.+|.+.+ ...++++++|+.+|.+.- ++-....+.+.+|+++.
T Consensus 554 ~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~~~~~~~~~~~~~~~~~~ 616 (620)
T COG1506 554 LLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRPENRVKVLKEILDWFKRH 616 (620)
T ss_pred EEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHH
Confidence 999999999999988888876443 335799999999998755 55677888888888763
No 78
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.39 E-value=3.4e-12 Score=101.76 Aligned_cols=212 Identities=19% Similarity=0.275 Sum_probs=131.3
Q ss_pred CcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHh-hhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q 022534 19 GEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQM-SDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEEL 97 (295)
Q Consensus 19 ~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l-~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l 97 (295)
+.++++.-..-+ ++..|+++++|+..++-+-.-.++.-+ ...+..|+.+|.||+|+|+... +.+.+.-|-
T Consensus 63 D~vtL~a~~~~~-E~S~pTlLyfh~NAGNmGhr~~i~~~fy~~l~mnv~ivsYRGYG~S~Gsp--------sE~GL~lDs 133 (300)
T KOG4391|consen 63 DKVTLDAYLMLS-ESSRPTLLYFHANAGNMGHRLPIARVFYVNLKMNVLIVSYRGYGKSEGSP--------SEEGLKLDS 133 (300)
T ss_pred cceeEeeeeecc-cCCCceEEEEccCCCcccchhhHHHHHHHHcCceEEEEEeeccccCCCCc--------cccceeccH
Confidence 345555433332 234789999999998887766666554 3447899999999999999743 234555566
Q ss_pred HHHHHHhC----CC-CceEEEEecccchHHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHH
Q 022534 98 DKLLDVLE----VK-YPFFLVVQGFLVGSYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIM 172 (295)
Q Consensus 98 ~~~~~~l~----~~-~~~~lv~~G~~~G~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (295)
.++++.+. ++ .+++|.|.+ +||+.++.+|++..+++.++++-+. ... .| ++..|+.-.+.
T Consensus 134 ~avldyl~t~~~~dktkivlfGrS-lGGAvai~lask~~~ri~~~ivENT-F~S---Ip----~~~i~~v~p~~------ 198 (300)
T KOG4391|consen 134 EAVLDYLMTRPDLDKTKIVLFGRS-LGGAVAIHLASKNSDRISAIIVENT-FLS---IP----HMAIPLVFPFP------ 198 (300)
T ss_pred HHHHHHHhcCccCCcceEEEEecc-cCCeeEEEeeccchhheeeeeeech-hcc---ch----hhhhheeccch------
Confidence 66666652 22 345666432 3567788889999999998887643 110 01 11111110000
Q ss_pred HHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchH
Q 022534 173 AERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVA 252 (295)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~ 252 (295)
-+.++ .++-. ..+. ...++. .-++|.|+|.|..|.++|+..-
T Consensus 199 -~k~i~---------------------------~lc~k-n~~~---S~~ki~------~~~~P~LFiSGlkDelVPP~~M 240 (300)
T KOG4391|consen 199 -MKYIP---------------------------LLCYK-NKWL---SYRKIG------QCRMPFLFISGLKDELVPPVMM 240 (300)
T ss_pred -hhHHH---------------------------HHHHH-hhhc---chhhhc------cccCceEEeecCccccCCcHHH
Confidence 00000 00000 0000 001111 2268999999999999999999
Q ss_pred HHHHhcCCC-CeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 253 EEFQKGNPN-VVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 253 ~~~~~~~~~-~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
+++++.+|. .+++.++|++.|.-.+- -|...++|++||..
T Consensus 241 r~Ly~~c~S~~Krl~eFP~gtHNDT~i-~dGYfq~i~dFlaE 281 (300)
T KOG4391|consen 241 RQLYELCPSRTKRLAEFPDGTHNDTWI-CDGYFQAIEDFLAE 281 (300)
T ss_pred HHHHHhCchhhhhheeCCCCccCceEE-eccHHHHHHHHHHH
Confidence 999998875 35899999999974432 46677889999864
No 79
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.37 E-value=8.8e-11 Score=96.12 Aligned_cols=218 Identities=16% Similarity=0.199 Sum_probs=133.5
Q ss_pred CceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEEEE
Q 022534 35 LGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVV 114 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~ 114 (295)
++.++++|=.|+++..|+.+...|.. ...++++.+||+|.--... ...+++.+++.|..-+...-.++|+.++
T Consensus 7 ~~~L~cfP~AGGsa~~fr~W~~~lp~-~iel~avqlPGR~~r~~ep-----~~~di~~Lad~la~el~~~~~d~P~alf- 79 (244)
T COG3208 7 RLRLFCFPHAGGSASLFRSWSRRLPA-DIELLAVQLPGRGDRFGEP-----LLTDIESLADELANELLPPLLDAPFALF- 79 (244)
T ss_pred CceEEEecCCCCCHHHHHHHHhhCCc-hhheeeecCCCcccccCCc-----ccccHHHHHHHHHHHhccccCCCCeeec-
Confidence 56899999999999999999888875 6999999999998553321 1236677777777766632246788887
Q ss_pred ecccchH-HHHHHHHhC---cCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHHh-CCC-cccccc
Q 022534 115 QGFLVGS-YGLTWALKN---PSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEA-GSP-YVLKLD 188 (295)
Q Consensus 115 ~G~~~G~-~~~~~a~~~---p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~ 188 (295)
|||+|+ +|..+|.+. --...++.++++.......... ... . .+..+.+...+. +.+ .++.
T Consensus 80 -GHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~-i~~--------~--~D~~~l~~l~~lgG~p~e~le-- 145 (244)
T COG3208 80 -GHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQ-IHH--------L--DDADFLADLVDLGGTPPELLE-- 145 (244)
T ss_pred -ccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCC-ccC--------C--CHHHHHHHHHHhCCCChHHhc--
Confidence 778764 576776532 1225667666543221100000 000 0 011111111111 111 1110
Q ss_pred ccccccccccccCCchh-HHHHHHHhcchhhhhHhhhcCcC---CCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeE
Q 022534 189 KADVYRLPYLASSGPGF-ALLEAARKVNFKDISSRIGAGFS---SGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVK 264 (295)
Q Consensus 189 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~ 264 (295)
+++. ++.-...++++.- + ..|. ...++||+.++.|++|+.+..+....+++....+.+
T Consensus 146 -------------d~El~~l~LPilRAD~~~----~-e~Y~~~~~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~~f~ 207 (244)
T COG3208 146 -------------DPELMALFLPILRADFRA----L-ESYRYPPPAPLACPIHAFGGEKDHEVSRDELGAWREHTKGDFT 207 (244)
T ss_pred -------------CHHHHHHHHHHHHHHHHH----h-cccccCCCCCcCcceEEeccCcchhccHHHHHHHHHhhcCCce
Confidence 1111 0110111111110 0 1111 136789999999999999988888888888887789
Q ss_pred EEEecCCCCCCCCCChHHHHHHHHHHHH
Q 022534 265 LQMIEGAGHMPQEDWPEKVVDGLRYFFL 292 (295)
Q Consensus 265 ~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 292 (295)
+..++| ||+...++.++|.+.|...+.
T Consensus 208 l~~fdG-gHFfl~~~~~~v~~~i~~~l~ 234 (244)
T COG3208 208 LRVFDG-GHFFLNQQREEVLARLEQHLA 234 (244)
T ss_pred EEEecC-cceehhhhHHHHHHHHHHHhh
Confidence 999985 999999999999999988874
No 80
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.37 E-value=5.3e-12 Score=113.81 Aligned_cols=100 Identities=13% Similarity=0.294 Sum_probs=71.8
Q ss_pred CceEEEEcCCCCCC--ccchh-hHHHhh--hCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----C
Q 022534 35 LGTIVFLHGAPSHS--YSYRN-VMSQMS--DAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVL----E 105 (295)
Q Consensus 35 ~~~vv~lHG~~~~~--~~w~~-~~~~l~--~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l----~ 105 (295)
+|++|+||||+++. ..|.. +++.|. +.+|+||++|++|||.|..+... .+ ...+++++.++++.+ +
T Consensus 41 ~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~----~~-t~~vg~~la~lI~~L~~~~g 115 (442)
T TIGR03230 41 TKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSA----AY-TKLVGKDVAKFVNWMQEEFN 115 (442)
T ss_pred CCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCcccc----cc-HHHHHHHHHHHHHHHHHhhC
Confidence 57999999998753 45765 455543 22699999999999998765321 22 245667777777754 3
Q ss_pred --CCCceEEEEecccchH-HHHHHHHhCcCccceeEEEcC
Q 022534 106 --VKYPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNS 142 (295)
Q Consensus 106 --~~~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~ 142 (295)
+++ ++|| |||+|+ +|..++..+|++|.+++++++
T Consensus 116 l~l~~-VhLI--GHSLGAhIAg~ag~~~p~rV~rItgLDP 152 (442)
T TIGR03230 116 YPWDN-VHLL--GYSLGAHVAGIAGSLTKHKVNRITGLDP 152 (442)
T ss_pred CCCCc-EEEE--EECHHHHHHHHHHHhCCcceeEEEEEcC
Confidence 444 7777 777764 677777889999999999975
No 81
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.34 E-value=7.1e-11 Score=97.84 Aligned_cols=108 Identities=14% Similarity=0.145 Sum_probs=66.8
Q ss_pred CCceEEEEcCCCCCCccch---hhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCC-----CCCCHHHHHHHHHHHHHHhC
Q 022534 34 RLGTIVFLHGAPSHSYSYR---NVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDD-----FDFTENEFHEELDKLLDVLE 105 (295)
Q Consensus 34 ~~~~vv~lHG~~~~~~~w~---~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~-----~~~~~~~~~~~l~~~~~~l~ 105 (295)
+.|.||++||++++...|. .+...+.+.||.|++||++|+|.+......+.. ......++.+.+..+.+..+
T Consensus 12 ~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 91 (212)
T TIGR01840 12 PRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKANYS 91 (212)
T ss_pred CCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHhcC
Confidence 4689999999998776654 234444456899999999999865431100000 00011233333344444434
Q ss_pred CC-CceEEEEecccch-HHHHHHHHhCcCccceeEEEcCC
Q 022534 106 VK-YPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSP 143 (295)
Q Consensus 106 ~~-~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p 143 (295)
++ +.++++ |+|+| .+++.++.++|+.+.+++.++++
T Consensus 92 id~~~i~l~--G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~ 129 (212)
T TIGR01840 92 IDPNRVYVT--GLSAGGGMTAVLGCTYPDVFAGGASNAGL 129 (212)
T ss_pred cChhheEEE--EECHHHHHHHHHHHhCchhheEEEeecCC
Confidence 43 245665 77766 46778889999999998887654
No 82
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.30 E-value=5.9e-11 Score=98.35 Aligned_cols=198 Identities=18% Similarity=0.266 Sum_probs=103.7
Q ss_pred cchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CCC-CceEEEEecccchH-HH
Q 022534 50 SYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVL----EVK-YPFFLVVQGFLVGS-YG 123 (295)
Q Consensus 50 ~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l----~~~-~~~~lv~~G~~~G~-~~ 123 (295)
+|......|+++||.|+.+|.||.+.....-...-..+.. ..-.+|+.+.++.+ .++ +.+.++ |+|.|+ ++
T Consensus 2 ~f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~-~~~~~D~~~~i~~l~~~~~iD~~ri~i~--G~S~GG~~a 78 (213)
T PF00326_consen 2 SFNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWG-QADVDDVVAAIEYLIKQYYIDPDRIGIM--GHSYGGYLA 78 (213)
T ss_dssp --SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTT-HHHHHHHHHHHHHHHHTTSEEEEEEEEE--EETHHHHHH
T ss_pred eeeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhcccc-ccchhhHHHHHHHHhccccccceeEEEE--ccccccccc
Confidence 4567778898889999999999998543210000000111 12334444444443 222 224443 677665 45
Q ss_pred HHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHHhCCCccccccccccccccccccCCc
Q 022534 124 LTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGP 203 (295)
Q Consensus 124 ~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (295)
+..+.++|+++++++..++...... .... . .. +. ...+.....+.. ..
T Consensus 79 ~~~~~~~~~~f~a~v~~~g~~d~~~-~~~~-~--~~-----~~------~~~~~~~~~~~~----~~------------- 126 (213)
T PF00326_consen 79 LLAATQHPDRFKAAVAGAGVSDLFS-YYGT-T--DI-----YT------KAEYLEYGDPWD----NP------------- 126 (213)
T ss_dssp HHHHHHTCCGSSEEEEESE-SSTTC-SBHH-T--CC-----HH------HGHHHHHSSTTT----SH-------------
T ss_pred chhhcccceeeeeeeccceecchhc-cccc-c--cc-----cc------cccccccCccch----hh-------------
Confidence 5556679999998887654332211 1100 0 00 00 001111111100 00
Q ss_pred hhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhc---CCCCeEEEEecCCCCCCC-CCC
Q 022534 204 GFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKG---NPNVVKLQMIEGAGHMPQ-EDW 279 (295)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~---~~~~~~~~~i~~~gH~~~-~e~ 279 (295)
..+...... ....++ ..++|+|+++|++|..+|++.+.++.+. ....++++++|++||... -+.
T Consensus 127 --~~~~~~s~~---~~~~~~-------~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~ 194 (213)
T PF00326_consen 127 --EFYRELSPI---SPADNV-------QIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPEN 194 (213)
T ss_dssp --HHHHHHHHG---GGGGGC-------GGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHHH
T ss_pred --hhhhhhccc---cccccc-------cCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCchh
Confidence 011111100 011110 1579999999999999999888777543 233489999999999554 445
Q ss_pred hHHHHHHHHHHHHhc
Q 022534 280 PEKVVDGLRYFFLNY 294 (295)
Q Consensus 280 p~~~~~~i~~fl~~~ 294 (295)
..+..+.+.+|++.+
T Consensus 195 ~~~~~~~~~~f~~~~ 209 (213)
T PF00326_consen 195 RRDWYERILDFFDKY 209 (213)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 668889999999864
No 83
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.27 E-value=8.1e-10 Score=101.68 Aligned_cols=228 Identities=13% Similarity=0.148 Sum_probs=126.2
Q ss_pred CCceEEEEcCCCCCCccc-----hhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----
Q 022534 34 RLGTIVFLHGAPSHSYSY-----RNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVL---- 104 (295)
Q Consensus 34 ~~~~vv~lHG~~~~~~~w-----~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l---- 104 (295)
.+.|||+++.+--....| +-++.+|.++||+|+++|++.-+.+++ ++++++|++.+.+.++.+
T Consensus 214 ~~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~r--------~~~ldDYv~~i~~Ald~V~~~t 285 (560)
T TIGR01839 214 HARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAHR--------EWGLSTYVDALKEAVDAVRAIT 285 (560)
T ss_pred CCCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhhc--------CCCHHHHHHHHHHHHHHHHHhc
Confidence 457999999988666666 477888888899999999998776653 246788887777777765
Q ss_pred CCCCceEEEEecccc-hHHHHH----HHHhCcC-ccceeEEEcCCCCCCCCC-chhhh---hh-----hcccchhhhhhh
Q 022534 105 EVKYPFFLVVQGFLV-GSYGLT----WALKNPS-RISKLAILNSPLTASSPL-PGLFQ---QL-----RIPLLGEFTAQN 169 (295)
Q Consensus 105 ~~~~~~~lv~~G~~~-G~~~~~----~a~~~p~-~v~~lil~~~p~~~~~~~-~~~~~---~~-----~~~~~~~~~~~~ 169 (295)
+.+ ++.++ |+++ |.+.+. +|+++++ +|++++++.+|.+..... ...+. .+ ...-.+.+. -
T Consensus 286 G~~-~vnl~--GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~~~g~l~~f~~e~~~~~~e~~~~~~G~lp--g 360 (560)
T TIGR01839 286 GSR-DLNLL--GACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDSTMESPAALFADEQTLEAAKRRSYQAGVLD--G 360 (560)
T ss_pred CCC-CeeEE--EECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccCCCCcchhccChHHHHHHHHHHHhcCCcC--H
Confidence 334 46666 7755 445443 6778886 899999998887643211 11110 00 000000000 0
Q ss_pred HHHHHHHHHhC----------CCcccccc--ccccccccccccCCchhHHHHHH---Hhcchhh--hhHhhhcCcCCCCC
Q 022534 170 AIMAERFIEAG----------SPYVLKLD--KADVYRLPYLASSGPGFALLEAA---RKVNFKD--ISSRIGAGFSSGSW 232 (295)
Q Consensus 170 ~~~~~~~~~~~----------~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~--~~~~~~~~~~~~~~ 232 (295)
..+...|.-.. ..+++... ..+...+......-|+..+.+.. ....+.. .+.-.......+++
T Consensus 361 ~~ma~~F~~LrP~dliw~y~v~~yllg~~p~~fdll~Wn~D~t~lPg~~~~e~l~ly~~N~L~~pG~l~v~G~~idL~~I 440 (560)
T TIGR01839 361 SEMAKVFAWMRPNDLIWNYWVNNYLLGNEPPAFDILYWNNDTTRLPAAFHGDLLDMFKSNPLTRPDALEVCGTPIDLKKV 440 (560)
T ss_pred HHHHHHHHhcCchhhhHHHHHHHhhcCCCcchhhHHHHhCcCccchHHHHHHHHHHHhcCCCCCCCCEEECCEEechhcC
Confidence 00111111000 00101000 00111111111222343322211 1111111 00000011123578
Q ss_pred CCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCC
Q 022534 233 DKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMP 275 (295)
Q Consensus 233 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~ 275 (295)
+||++++.|++|.|+|.+.+..+.+.++.+++++.. .+||.-
T Consensus 441 ~~Pvl~va~~~DHIvPw~s~~~~~~l~gs~~~fvl~-~gGHIg 482 (560)
T TIGR01839 441 KCDSFSVAGTNDHITPWDAVYRSALLLGGKRRFVLS-NSGHIQ 482 (560)
T ss_pred CCCeEEEecCcCCcCCHHHHHHHHHHcCCCeEEEec-CCCccc
Confidence 999999999999999999999999888876666666 579964
No 84
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.26 E-value=3e-11 Score=115.39 Aligned_cols=113 Identities=12% Similarity=0.076 Sum_probs=79.4
Q ss_pred eeEEeCcEEEEEEEcCCCC-------CCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCC-------
Q 022534 14 SYIKSGEYRWFVRETGSAD-------SRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKP------- 79 (295)
Q Consensus 14 ~~~~~~~~~~~~~~~g~~~-------~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~------- 79 (295)
.+...++.++.|...|.+. ...|+|||+||++++...|..+++.|+++||+|+++|+||||+|+..
T Consensus 421 ~~~~p~~~~i~~~~~~~g~~~~~~p~~g~P~VVllHG~~g~~~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~ 500 (792)
T TIGR03502 421 LLTTPNGPVIAAFRAGTGLETFAAPTDGWPVVIYQHGITGAKENALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVN 500 (792)
T ss_pred EEEecCcchhhhhhcccccccccCCCCCCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEeCCCCCCcccccccccccc
Confidence 3444466677666554331 12358999999999999999999999877999999999999999542
Q ss_pred --CCCCCCC---------CCCHHHHHHHHHHHHHHhC--------------C-CCceEEEEecccchHH-HHHHHH
Q 022534 80 --EKGYDDF---------DFTENEFHEELDKLLDVLE--------------V-KYPFFLVVQGFLVGSY-GLTWAL 128 (295)
Q Consensus 80 --~~~~~~~---------~~~~~~~~~~l~~~~~~l~--------------~-~~~~~lv~~G~~~G~~-~~~~a~ 128 (295)
......| ...+..++.|+..+...++ . ..+++++ |||+|++ |..++.
T Consensus 501 a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~l--GHSLGgiig~~~~~ 574 (792)
T TIGR03502 501 ATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFL--GHSLGGIVGTSFIA 574 (792)
T ss_pred ccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEE--ecCHHHHHHHHHHH
Confidence 1110011 1256788899999988886 1 1356676 7888765 555554
No 85
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.23 E-value=2.6e-11 Score=104.29 Aligned_cols=125 Identities=15% Similarity=0.174 Sum_probs=79.1
Q ss_pred ccccceeeEEeC-cEEEEEEEcCCCCCCCceEEEEcCCCCCC-ccchhhH-HH-hhhCCCeEEEeCCCCCCCCCCCCCCC
Q 022534 8 KGREYGSYIKSG-EYRWFVRETGSADSRLGTIVFLHGAPSHS-YSYRNVM-SQ-MSDAGFHCFAPDWLGFGFSDKPEKGY 83 (295)
Q Consensus 8 ~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~vv~lHG~~~~~-~~w~~~~-~~-l~~~~~~via~Dl~G~G~S~~~~~~~ 83 (295)
.+|+.+..+..+ +..+......+ .+|++|++|||+++. ..|...+ .. |...+|+|+++|++|++.+..+.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~f~~---~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~--- 84 (275)
T cd00707 11 ENPNCPQLLFADDPSSLKNSNFNP---SRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQ--- 84 (275)
T ss_pred CCCCCceEecCCChhhhhhcCCCC---CCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHH---
Confidence 445666666654 33444333332 257999999999887 6786544 33 44347999999999984433211
Q ss_pred CCCCCCHHHHHHHHHHHHHHh----CCC-CceEEEEecccchH-HHHHHHHhCcCccceeEEEcC
Q 022534 84 DDFDFTENEFHEELDKLLDVL----EVK-YPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNS 142 (295)
Q Consensus 84 ~~~~~~~~~~~~~l~~~~~~l----~~~-~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~ 142 (295)
..+......+++.++++.+ +.+ +.+++| |||+|+ ++..++..+|++|++++++++
T Consensus 85 --a~~~~~~v~~~la~~l~~L~~~~g~~~~~i~lI--GhSlGa~vAg~~a~~~~~~v~~iv~LDP 145 (275)
T cd00707 85 --AVNNTRVVGAELAKFLDFLVDNTGLSLENVHLI--GHSLGAHVAGFAGKRLNGKLGRITGLDP 145 (275)
T ss_pred --HHHhHHHHHHHHHHHHHHHHHhcCCChHHEEEE--EecHHHHHHHHHHHHhcCccceeEEecC
Confidence 1123334455556665554 222 347777 777765 667777889999999999974
No 86
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.20 E-value=2.5e-09 Score=94.37 Aligned_cols=106 Identities=18% Similarity=0.294 Sum_probs=65.5
Q ss_pred CCceEEEEcCCCCCC-ccch-hhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC---CC
Q 022534 34 RLGTIVFLHGAPSHS-YSYR-NVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEV---KY 108 (295)
Q Consensus 34 ~~~~vv~lHG~~~~~-~~w~-~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~---~~ 108 (295)
..|.||++||..+++ ..+- +++....+.||+|+.+..||+|.|.-..+.. |+ .....|+.++++.+.- +.
T Consensus 124 ~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtTpr~----f~-ag~t~Dl~~~v~~i~~~~P~a 198 (409)
T KOG1838|consen 124 TDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLTTPRL----FT-AGWTEDLREVVNHIKKRYPQA 198 (409)
T ss_pred CCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCccCCCce----ee-cCCHHHHHHHHHHHHHhCCCC
Confidence 468999999986655 4443 5556666679999999999999998654332 11 1345677777776543 22
Q ss_pred ceEEEEecccch-HHHHHHHHhCcC--ccceeEEEcCCCCC
Q 022534 109 PFFLVVQGFLVG-SYGLTWALKNPS--RISKLAILNSPLTA 146 (295)
Q Consensus 109 ~~~lv~~G~~~G-~~~~~~a~~~p~--~v~~lil~~~p~~~ 146 (295)
+. .+.|.|+| ++-..|..+-.+ .+.+-+.+++|++.
T Consensus 199 ~l--~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~ 237 (409)
T KOG1838|consen 199 PL--FAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDL 237 (409)
T ss_pred ce--EEEEecchHHHHHHHhhhccCCCCceeEEEEeccchh
Confidence 33 44478776 444444433222 24444455578764
No 87
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.19 E-value=3.8e-09 Score=88.30 Aligned_cols=218 Identities=15% Similarity=0.250 Sum_probs=125.9
Q ss_pred eEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEEEEec
Q 022534 37 TIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQG 116 (295)
Q Consensus 37 ~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G 116 (295)
+|+|+|+.+++...|..+++.|....+.|+.++.+|++....+ .-+++++++...+.+....-+.|+.|+ |
T Consensus 2 ~lf~~p~~gG~~~~y~~la~~l~~~~~~v~~i~~~~~~~~~~~-------~~si~~la~~y~~~I~~~~~~gp~~L~--G 72 (229)
T PF00975_consen 2 PLFCFPPAGGSASSYRPLARALPDDVIGVYGIEYPGRGDDEPP-------PDSIEELASRYAEAIRARQPEGPYVLA--G 72 (229)
T ss_dssp EEEEESSTTCSGGGGHHHHHHHTTTEEEEEEECSTTSCTTSHE-------ESSHHHHHHHHHHHHHHHTSSSSEEEE--E
T ss_pred eEEEEcCCccCHHHHHHHHHhCCCCeEEEEEEecCCCCCCCCC-------CCCHHHHHHHHHHHhhhhCCCCCeeeh--c
Confidence 7999999999999999999999752389999999999933322 227788888888888877666588887 7
Q ss_pred ccch-HHHHHHHH---hCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHHhCCCcccccccccc
Q 022534 117 FLVG-SYGLTWAL---KNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADV 192 (295)
Q Consensus 117 ~~~G-~~~~~~a~---~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (295)
||.| .+|..+|. ..-..+..+++++++........ ....... .. ..+.+................
T Consensus 73 ~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~~p~~~~~~-~~~~~~~---~~-------~~~~~~~~~~~~~~~~~~~~~ 141 (229)
T PF00975_consen 73 WSFGGILAFEMARQLEEAGEEVSRLILIDSPPPSIKERP-RSREPSD---EQ-------FIEELRRIGGTPDASLEDEEL 141 (229)
T ss_dssp ETHHHHHHHHHHHHHHHTT-SESEEEEESCSSTTCHSCH-HHHHCHH---HH-------HHHHHHHHCHHHHHHCHHHHH
T ss_pred cCccHHHHHHHHHHHHHhhhccCceEEecCCCCCcccch-hhhhhhH---HH-------HHHHHHHhcCCchhhhcCHHH
Confidence 7765 46766664 24456889999986543211111 0000000 00 000000000000000000000
Q ss_pred ccccccccCCchhHHHHHHHhcchhhhhHhhhcC-cC-CCCCCCcEEEEEeCCCCCCCcc---hHHHHHhcCCCCeEEEE
Q 022534 193 YRLPYLASSGPGFALLEAARKVNFKDISSRIGAG-FS-SGSWDKPVLVAWGISDKYLPQS---VAEEFQKGNPNVVKLQM 267 (295)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~P~l~i~G~~D~~~~~~---~~~~~~~~~~~~~~~~~ 267 (295)
. ..+...+. +....+... .. ...-.+|.++....+|+..... ...++.+..+..++++.
T Consensus 142 ~-----------~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~ 205 (229)
T PF00975_consen 142 L-----------ARLLRALR-----DDFQALENYSIRPIDKQKVPITLFYALDDPLVSMDRLEEADRWWDYTSGDVEVHD 205 (229)
T ss_dssp H-----------HHHHHHHH-----HHHHHHHTCS-TTSSSESSEEEEEEECSSSSSSHHCGGHHCHHHGCBSSSEEEEE
T ss_pred H-----------HHHHHHHH-----HHHHHHhhccCCccccCCCcEEEEecCCCccccchhhhhHHHHHHhcCCCcEEEE
Confidence 0 00111110 000001000 00 0011578999999999877554 34446777777678889
Q ss_pred ecCCCCCCCCC-ChHHHHHHHHHHH
Q 022534 268 IEGAGHMPQED-WPEKVVDGLRYFF 291 (295)
Q Consensus 268 i~~~gH~~~~e-~p~~~~~~i~~fl 291 (295)
++| +|..++. +..++.+.|.++|
T Consensus 206 v~G-~H~~~l~~~~~~i~~~I~~~~ 229 (229)
T PF00975_consen 206 VPG-DHFSMLKPHVAEIAEKIAEWL 229 (229)
T ss_dssp ESS-ETTGHHSTTHHHHHHHHHHHH
T ss_pred EcC-CCcEecchHHHHHHHHHhccC
Confidence 975 9988776 7788989888875
No 88
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.16 E-value=1.9e-10 Score=95.58 Aligned_cols=181 Identities=22% Similarity=0.266 Sum_probs=96.4
Q ss_pred CCCceEEEEcCCCCCCccchhhHH-HhhhCCCeEEEeCCCC------CCC---CCCCCCCCC-CCCC---CHHHHHHHHH
Q 022534 33 SRLGTIVFLHGAPSHSYSYRNVMS-QMSDAGFHCFAPDWLG------FGF---SDKPEKGYD-DFDF---TENEFHEELD 98 (295)
Q Consensus 33 ~~~~~vv~lHG~~~~~~~w~~~~~-~l~~~~~~via~Dl~G------~G~---S~~~~~~~~-~~~~---~~~~~~~~l~ 98 (295)
+.++.||||||+|++...|..... .+.....+++++.=|- .|. +=-+....+ .... .++.-++.+.
T Consensus 12 ~~~~lvi~LHG~G~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~l~ 91 (216)
T PF02230_consen 12 KAKPLVILLHGYGDSEDLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAERLD 91 (216)
T ss_dssp T-SEEEEEE--TTS-HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHHHH
T ss_pred CCceEEEEECCCCCCcchhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHHHH
Confidence 346799999999999977766655 2222357777764331 232 110000000 0001 1223344555
Q ss_pred HHHHHh---CCC-CceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHH
Q 022534 99 KLLDVL---EVK-YPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMA 173 (295)
Q Consensus 99 ~~~~~l---~~~-~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (295)
++++.. +++ +.++|. |+|-| ++++.+++++|+.+.+++.+++......
T Consensus 92 ~li~~~~~~~i~~~ri~l~--GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~------------------------- 144 (216)
T PF02230_consen 92 ELIDEEVAYGIDPSRIFLG--GFSQGAAMALYLALRYPEPLAGVVALSGYLPPES------------------------- 144 (216)
T ss_dssp HHHHHHHHTT--GGGEEEE--EETHHHHHHHHHHHCTSSTSSEEEEES---TTGC-------------------------
T ss_pred HHHHHHHHcCCChhheehh--hhhhHHHHHHHHHHHcCcCcCEEEEeeccccccc-------------------------
Confidence 555532 232 235554 88865 5788899999999999998863110000
Q ss_pred HHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHH
Q 022534 174 ERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAE 253 (295)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~ 253 (295)
. . . +.... .-++|++++||++|+++|.+.++
T Consensus 145 --------~--~----~---------------------------~~~~~--------~~~~pi~~~hG~~D~vvp~~~~~ 175 (216)
T PF02230_consen 145 --------E--L----E---------------------------DRPEA--------LAKTPILIIHGDEDPVVPFEWAE 175 (216)
T ss_dssp --------C--C----H---------------------------CCHCC--------CCTS-EEEEEETT-SSSTHHHHH
T ss_pred --------c--c----c---------------------------ccccc--------cCCCcEEEEecCCCCcccHHHHH
Confidence 0 0 0 00000 11689999999999999987765
Q ss_pred HHHhc---CCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 254 EFQKG---NPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 254 ~~~~~---~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
...+. ...+++++.+++.||... .+....+++||++
T Consensus 176 ~~~~~L~~~~~~v~~~~~~g~gH~i~----~~~~~~~~~~l~~ 214 (216)
T PF02230_consen 176 KTAEFLKAAGANVEFHEYPGGGHEIS----PEELRDLREFLEK 214 (216)
T ss_dssp HHHHHHHCTT-GEEEEEETT-SSS------HHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCEEEEEcCCCCCCCC----HHHHHHHHHHHhh
Confidence 55433 333579999999999874 4455678888875
No 89
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.14 E-value=8.3e-09 Score=90.39 Aligned_cols=235 Identities=19% Similarity=0.193 Sum_probs=109.7
Q ss_pred eEEeCcEEEEEEEcCCC--CCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCC-CCCCCC----CCCCCC-
Q 022534 15 YIKSGEYRWFVRETGSA--DSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFG-FSDKPE----KGYDDF- 86 (295)
Q Consensus 15 ~~~~~~~~~~~~~~g~~--~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G-~S~~~~----~~~~~~- 86 (295)
|-+.+|.+++..-.-+. ..+.|.||..||.++....|...+. ++..||-|+++|.||.| .|.... ....++
T Consensus 61 f~s~~g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~~~~~~~~-~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~ 139 (320)
T PF05448_consen 61 FESFDGSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSGDPFDLLP-WAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHI 139 (320)
T ss_dssp EEEGGGEEEEEEEEEES-SSSSEEEEEEE--TT--GGGHHHHHH-HHHTT-EEEEE--TTTSSSS-B-SSBSSS-SSSST
T ss_pred EEccCCCEEEEEEEecCCCCCCcCEEEEecCCCCCCCCcccccc-cccCCeEEEEecCCCCCCCCCCccccCCCCCccHH
Confidence 33446777766554332 3345789999999999888877665 55579999999999999 332110 000000
Q ss_pred ---------CCCHHHHHHHHHHHHHHhC----CCCceEEEEecccc-hHHHHHHHHhCcCccceeEEEcCCCCCCCCCch
Q 022534 87 ---------DFTENEFHEELDKLLDVLE----VKYPFFLVVQGFLV-GSYGLTWALKNPSRISKLAILNSPLTASSPLPG 152 (295)
Q Consensus 87 ---------~~~~~~~~~~l~~~~~~l~----~~~~~~lv~~G~~~-G~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~ 152 (295)
.|-......|+...++.+- ++. --|.+.|.|. |.+++..|+-.| +|++.+.. .|.... .+.
T Consensus 140 ~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~-~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~-vP~l~d--~~~ 214 (320)
T PF05448_consen 140 TRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDG-KRIGVTGGSQGGGLALAAAALDP-RVKAAAAD-VPFLCD--FRR 214 (320)
T ss_dssp TTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEE-EEEEEEEETHHHHHHHHHHHHSS-T-SEEEEE-SESSSS--HHH
T ss_pred hcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCc-ceEEEEeecCchHHHHHHHHhCc-cccEEEec-CCCccc--hhh
Confidence 1111122344444444331 221 1233346665 457777777775 68877665 454321 000
Q ss_pred hhhhhhccc-chhhhhhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCC
Q 022534 153 LFQQLRIPL-LGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGS 231 (295)
Q Consensus 153 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (295)
.+.... ...+. + ..+|+....+.. .......+.+.-.+.... +++
T Consensus 215 ---~~~~~~~~~~y~---~--~~~~~~~~d~~~-----------------~~~~~v~~~L~Y~D~~nf---------A~r 260 (320)
T PF05448_consen 215 ---ALELRADEGPYP---E--IRRYFRWRDPHH-----------------EREPEVFETLSYFDAVNF---------ARR 260 (320)
T ss_dssp ---HHHHT--STTTH---H--HHHHHHHHSCTH-----------------CHHHHHHHHHHTT-HHHH---------GGG
T ss_pred ---hhhcCCccccHH---H--HHHHHhccCCCc-----------------ccHHHHHHHHhhhhHHHH---------HHH
Confidence 000000 00000 0 011111000000 000011121111111111 126
Q ss_pred CCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHH
Q 022534 232 WDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFL 292 (295)
Q Consensus 232 ~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 292 (295)
++||+++-.|=.|+++|+...--.++.++..+++.++|..||....+. -.+...+||.
T Consensus 261 i~~pvl~~~gl~D~~cPP~t~fA~yN~i~~~K~l~vyp~~~He~~~~~---~~~~~~~~l~ 318 (320)
T PF05448_consen 261 IKCPVLFSVGLQDPVCPPSTQFAAYNAIPGPKELVVYPEYGHEYGPEF---QEDKQLNFLK 318 (320)
T ss_dssp --SEEEEEEETT-SSS-HHHHHHHHCC--SSEEEEEETT--SSTTHHH---HHHHHHHHHH
T ss_pred cCCCEEEEEecCCCCCCchhHHHHHhccCCCeeEEeccCcCCCchhhH---HHHHHHHHHh
Confidence 789999999999999999988778888887789999999999753322 1555666664
No 90
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.10 E-value=4.7e-10 Score=105.93 Aligned_cols=117 Identities=13% Similarity=0.021 Sum_probs=80.4
Q ss_pred CcEEEEEEEcCCC-CCCCceEEEEcCCCCCCc---cch-hhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHH
Q 022534 19 GEYRWFVRETGSA-DSRLGTIVFLHGAPSHSY---SYR-NVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEF 93 (295)
Q Consensus 19 ~~~~~~~~~~g~~-~~~~~~vv~lHG~~~~~~---~w~-~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~ 93 (295)
+|.++++..+.+. ..+.|+||++||++.+.. .|. .....|+++||.|+++|+||||.|+...... + ...
T Consensus 5 DG~~L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~~-----~-~~~ 78 (550)
T TIGR00976 5 DGTRLAIDVYRPAGGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDLL-----G-SDE 78 (550)
T ss_pred CCCEEEEEEEecCCCCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEec-----C-ccc
Confidence 6777876666442 234689999999987653 232 3456677789999999999999999753221 1 345
Q ss_pred HHHHHHHHHHhCC----CCceEEEEecccchH-HHHHHHHhCcCccceeEEEcCC
Q 022534 94 HEELDKLLDVLEV----KYPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNSP 143 (295)
Q Consensus 94 ~~~l~~~~~~l~~----~~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~p 143 (295)
++|+.++++.+.. +.++.++ |+|.|+ +++.+|..+|+++++++..++.
T Consensus 79 ~~D~~~~i~~l~~q~~~~~~v~~~--G~S~GG~~a~~~a~~~~~~l~aiv~~~~~ 131 (550)
T TIGR00976 79 AADGYDLVDWIAKQPWCDGNVGML--GVSYLAVTQLLAAVLQPPALRAIAPQEGV 131 (550)
T ss_pred chHHHHHHHHHHhCCCCCCcEEEE--EeChHHHHHHHHhccCCCceeEEeecCcc
Confidence 6677777776522 2346665 677654 5677788899999999876543
No 91
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.09 E-value=5.2e-09 Score=87.05 Aligned_cols=182 Identities=19% Similarity=0.283 Sum_probs=100.7
Q ss_pred CCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCC------CHHHHHHHHHHHHHHhCCC
Q 022534 34 RLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDF------TENEFHEELDKLLDVLEVK 107 (295)
Q Consensus 34 ~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~------~~~~~~~~l~~~~~~l~~~ 107 (295)
+.|.||++|++.+-...-+.+++.|++.||.|++||+-+-..............+ ..+....++...++.+.-.
T Consensus 13 ~~~~Vvv~~d~~G~~~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~ 92 (218)
T PF01738_consen 13 PRPAVVVIHDIFGLNPNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLRAQ 92 (218)
T ss_dssp SEEEEEEE-BTTBS-HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHHCT
T ss_pred CCCEEEEEcCCCCCchHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhc
Confidence 4689999999887666666888999999999999998643331111100000000 0123456665556655321
Q ss_pred -----CceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHHhCC
Q 022534 108 -----YPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGS 181 (295)
Q Consensus 108 -----~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (295)
+++.++ |+++| .+++.+|.+. +.+++.+..-++.. + ..
T Consensus 93 ~~~~~~kig~v--Gfc~GG~~a~~~a~~~-~~~~a~v~~yg~~~-----~---------------~~------------- 136 (218)
T PF01738_consen 93 PEVDPGKIGVV--GFCWGGKLALLLAARD-PRVDAAVSFYGGSP-----P---------------PP------------- 136 (218)
T ss_dssp TTCEEEEEEEE--EETHHHHHHHHHHCCT-TTSSEEEEES-SSS-----G---------------GG-------------
T ss_pred cccCCCcEEEE--EEecchHHhhhhhhhc-cccceEEEEcCCCC-----C---------------Cc-------------
Confidence 234454 77765 5677766666 57887776531000 0 00
Q ss_pred CccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcC--
Q 022534 182 PYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGN-- 259 (295)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~-- 259 (295)
. . +.. .++++|+++++|++|+.++.+....+.+.+
T Consensus 137 ------------------------~-~---------~~~---------~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~ 173 (218)
T PF01738_consen 137 ------------------------P-L---------EDA---------PKIKAPVLILFGENDPFFPPEEVEALEEALKA 173 (218)
T ss_dssp ------------------------H-H---------HHG---------GG--S-EEEEEETT-TTS-HHHHHHHHHHHHC
T ss_pred ------------------------c-h---------hhh---------cccCCCEeecCccCCCCCChHHHHHHHHHHHh
Confidence 0 0 000 034799999999999999988766655443
Q ss_pred -CCCeEEEEecCCCCCCCCCC--------hHHHHHHHHHHHHhc
Q 022534 260 -PNVVKLQMIEGAGHMPQEDW--------PEKVVDGLRYFFLNY 294 (295)
Q Consensus 260 -~~~~~~~~i~~~gH~~~~e~--------p~~~~~~i~~fl~~~ 294 (295)
....+++++||++|-.+... .++..+.+.+||.++
T Consensus 174 ~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~~ 217 (218)
T PF01738_consen 174 AGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKRH 217 (218)
T ss_dssp TTTTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC-
T ss_pred cCCcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHhc
Confidence 44589999999999665432 235566677777653
No 92
>PRK10162 acetyl esterase; Provisional
Probab=99.07 E-value=1.2e-08 Score=89.73 Aligned_cols=110 Identities=14% Similarity=0.113 Sum_probs=66.7
Q ss_pred EEEEEcCCCCCCCceEEEEcCCC---CCCccchhhHHHhhh-CCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHH---
Q 022534 23 WFVRETGSADSRLGTIVFLHGAP---SHSYSYRNVMSQMSD-AGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHE--- 95 (295)
Q Consensus 23 ~~~~~~g~~~~~~~~vv~lHG~~---~~~~~w~~~~~~l~~-~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~--- 95 (295)
+.+..+.+..+..|+||++||++ ++...|..+...|+. .|+.|+++|.|.......+. .+++...
T Consensus 69 i~~~~y~P~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~~~p~--------~~~D~~~a~~ 140 (318)
T PRK10162 69 VETRLYYPQPDSQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEARFPQ--------AIEEIVAVCC 140 (318)
T ss_pred eEEEEECCCCCCCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCCCCCC--------cHHHHHHHHH
Confidence 33344433333357999999976 566778888888876 48999999999654332211 2344333
Q ss_pred HHHHHHHHhCCC-CceEEEEecccch-HHHHHHHHhC------cCccceeEEEcC
Q 022534 96 ELDKLLDVLEVK-YPFFLVVQGFLVG-SYGLTWALKN------PSRISKLAILNS 142 (295)
Q Consensus 96 ~l~~~~~~l~~~-~~~~lv~~G~~~G-~~~~~~a~~~------p~~v~~lil~~~ 142 (295)
.+.+..+.++++ +.++++ |+|+| .+++.+++.. +.++++++++.+
T Consensus 141 ~l~~~~~~~~~d~~~i~l~--G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p 193 (318)
T PRK10162 141 YFHQHAEDYGINMSRIGFA--GDSAGAMLALASALWLRDKQIDCGKVAGVLLWYG 193 (318)
T ss_pred HHHHhHHHhCCChhHEEEE--EECHHHHHHHHHHHHHHhcCCCccChhheEEECC
Confidence 333334456654 335554 66665 5666665432 357888887743
No 93
>COG0400 Predicted esterase [General function prediction only]
Probab=99.06 E-value=2.3e-09 Score=87.51 Aligned_cols=173 Identities=20% Similarity=0.317 Sum_probs=105.7
Q ss_pred CCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCC-----CCCCCCCCHH-------HHHHHHHH
Q 022534 32 DSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEK-----GYDDFDFTEN-------EFHEELDK 99 (295)
Q Consensus 32 ~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~-----~~~~~~~~~~-------~~~~~l~~ 99 (295)
++..|+||++||+|++...+-.....+.. +++++.+ | |.+..... -++...|..+ .+++.+.+
T Consensus 15 ~p~~~~iilLHG~Ggde~~~~~~~~~~~P-~~~~is~--r--G~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~ 89 (207)
T COG0400 15 DPAAPLLILLHGLGGDELDLVPLPELILP-NATLVSP--R--GPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEE 89 (207)
T ss_pred CCCCcEEEEEecCCCChhhhhhhhhhcCC-CCeEEcC--C--CCccccCcccceeecCCCccchhhHHHHHHHHHHHHHH
Confidence 34456899999999998888776555554 4666543 3 32221000 0001112222 34555555
Q ss_pred HHHHhCCC-CceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHH
Q 022534 100 LLDVLEVK-YPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFI 177 (295)
Q Consensus 100 ~~~~l~~~-~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (295)
..++.+++ +.++++ |+|=| ++++...+++|+.+++.++++ |+.......
T Consensus 90 ~~~~~gi~~~~ii~~--GfSqGA~ial~~~l~~~~~~~~ail~~-g~~~~~~~~-------------------------- 140 (207)
T COG0400 90 LAEEYGIDSSRIILI--GFSQGANIALSLGLTLPGLFAGAILFS-GMLPLEPEL-------------------------- 140 (207)
T ss_pred HHHHhCCChhheEEE--ecChHHHHHHHHHHhCchhhccchhcC-CcCCCCCcc--------------------------
Confidence 66666663 234454 88755 578888899999999998874 322110000
Q ss_pred HhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHh
Q 022534 178 EAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQK 257 (295)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~ 257 (295)
. .+ .-..|+++++|++|+++|...+.++++
T Consensus 141 ---~-----------------------------------~~------------~~~~pill~hG~~Dpvvp~~~~~~l~~ 170 (207)
T COG0400 141 ---L-----------------------------------PD------------LAGTPILLSHGTEDPVVPLALAEALAE 170 (207)
T ss_pred ---c-----------------------------------cc------------cCCCeEEEeccCcCCccCHHHHHHHHH
Confidence 0 00 115899999999999999888766654
Q ss_pred c---CCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 258 G---NPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 258 ~---~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
. ...+++...++ .||....| -.+.+++|+.+
T Consensus 171 ~l~~~g~~v~~~~~~-~GH~i~~e----~~~~~~~wl~~ 204 (207)
T COG0400 171 YLTASGADVEVRWHE-GGHEIPPE----ELEAARSWLAN 204 (207)
T ss_pred HHHHcCCCEEEEEec-CCCcCCHH----HHHHHHHHHHh
Confidence 3 33357889998 89987444 44566667765
No 94
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.01 E-value=1.9e-08 Score=89.36 Aligned_cols=216 Identities=19% Similarity=0.200 Sum_probs=103.1
Q ss_pred CCCceEEEEcCCCCCCcc-chhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-C-Cc
Q 022534 33 SRLGTIVFLHGAPSHSYS-YRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEV-K-YP 109 (295)
Q Consensus 33 ~~~~~vv~lHG~~~~~~~-w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~-~-~~ 109 (295)
.+.|+||++=|.-+-... |..+.++|+.+|+.++++|+||-|.|.+-.-. .++ +.+.+.|.+.+..+.. + ..
T Consensus 188 ~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~---~D~--~~l~~aVLd~L~~~p~VD~~R 262 (411)
T PF06500_consen 188 KPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLT---QDS--SRLHQAVLDYLASRPWVDHTR 262 (411)
T ss_dssp S-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S----S-C--CHHHHHHHHHHHHSTTEEEEE
T ss_pred CCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCCC---cCH--HHHHHHHHHHHhcCCccChhh
Confidence 334555555555444444 44555678888999999999999999753211 122 3455666666665532 2 12
Q ss_pred eEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHHhCCCcccccc
Q 022534 110 FFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLD 188 (295)
Q Consensus 110 ~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (295)
+.++ |.|.| .+|..+|..+++|++++|..+++....-..+. ...+.|.+ ..+ .+..++ +....
T Consensus 263 V~~~--G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~ft~~~--~~~~~P~m----y~d-~LA~rl---G~~~~---- 326 (411)
T PF06500_consen 263 VGAW--GFSFGGYYAVRLAALEDPRLKAVVALGAPVHHFFTDPE--WQQRVPDM----YLD-VLASRL---GMAAV---- 326 (411)
T ss_dssp EEEE--EETHHHHHHHHHHHHTTTT-SEEEEES---SCGGH-HH--HHTTS-HH----HHH-HHHHHC---T-SCE----
T ss_pred eEEE--EeccchHHHHHHHHhcccceeeEeeeCchHhhhhccHH--HHhcCCHH----HHH-HHHHHh---CCccC----
Confidence 3333 66654 56788888888999999988765432100000 00111211 000 011110 10000
Q ss_pred ccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcC-CCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEE
Q 022534 189 KADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFS-SGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQM 267 (295)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~ 267 (295)
+ ...+...+....++. .++- ..+..+|+|.+.|++|+++|.+...-++..... .+...
T Consensus 327 --~------------~~~l~~el~~~SLk~------qGlL~~rr~~~plL~i~~~~D~v~P~eD~~lia~~s~~-gk~~~ 385 (411)
T PF06500_consen 327 --S------------DESLRGELNKFSLKT------QGLLSGRRCPTPLLAINGEDDPVSPIEDSRLIAESSTD-GKALR 385 (411)
T ss_dssp ---------------HHHHHHHGGGGSTTT------TTTTTSS-BSS-EEEEEETT-SSS-HHHHHHHHHTBTT--EEEE
T ss_pred --C------------HHHHHHHHHhcCcch------hccccCCCCCcceEEeecCCCCCCCHHHHHHHHhcCCC-Cceee
Confidence 0 011111112122211 1111 235689999999999999998887777765544 47777
Q ss_pred ecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 268 IEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 268 i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
|+... .-+.-+.-...+.+||+.
T Consensus 386 ~~~~~---~~~gy~~al~~~~~Wl~~ 408 (411)
T PF06500_consen 386 IPSKP---LHMGYPQALDEIYKWLED 408 (411)
T ss_dssp E-SSS---HHHHHHHHHHHHHHHHHH
T ss_pred cCCCc---cccchHHHHHHHHHHHHH
Confidence 77533 112234566778888875
No 95
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.00 E-value=7.6e-09 Score=82.39 Aligned_cols=153 Identities=21% Similarity=0.429 Sum_probs=89.0
Q ss_pred EEEEcCCCCCC-ccchhhHHH-hhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEEEEe
Q 022534 38 IVFLHGAPSHS-YSYRNVMSQ-MSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQ 115 (295)
Q Consensus 38 vv~lHG~~~~~-~~w~~~~~~-l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~ 115 (295)
|+++||++++. .-|...++. |.. .++|-.+|+ +.| ..+.....+.+-+.. .+++++||
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~-~~~V~~~~~------~~P---------~~~~W~~~l~~~i~~--~~~~~ilV-- 60 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLEN-SVRVEQPDW------DNP---------DLDEWVQALDQAIDA--IDEPTILV-- 60 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTT-SEEEEEC--------TS-----------HHHHHHHHHHCCHC---TTTEEEE--
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCC-CeEEecccc------CCC---------CHHHHHHHHHHHHhh--cCCCeEEE--
Confidence 68899997654 457655544 654 488888777 332 224455555544443 35567777
Q ss_pred cccchHHH-HHHH-HhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHHhCCCccccccccccc
Q 022534 116 GFLVGSYG-LTWA-LKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVY 193 (295)
Q Consensus 116 G~~~G~~~-~~~a-~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (295)
|||.|+++ +.++ ...+.+|++++|++ |.... ... . ..+... ...
T Consensus 61 aHSLGc~~~l~~l~~~~~~~v~g~lLVA-p~~~~---~~~-~--~~~~~~---------------------------~f~ 106 (171)
T PF06821_consen 61 AHSLGCLTALRWLAEQSQKKVAGALLVA-PFDPD---DPE-P--FPPELD---------------------------GFT 106 (171)
T ss_dssp EETHHHHHHHHHHHHTCCSSEEEEEEES---SCG---CHH-C--CTCGGC---------------------------CCT
T ss_pred EeCHHHHHHHHHHhhcccccccEEEEEc-CCCcc---ccc-c--hhhhcc---------------------------ccc
Confidence 66788764 5566 67888999999985 44321 000 0 000000 000
Q ss_pred cccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCC
Q 022534 194 RLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGH 273 (295)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH 273 (295)
..+ . . ...+|.++|.+++|++++.+.+.++++... +++++++++||
T Consensus 107 ~~p---------------------~--~---------~l~~~~~viaS~nDp~vp~~~a~~~A~~l~--a~~~~~~~~GH 152 (171)
T PF06821_consen 107 PLP---------------------R--D---------PLPFPSIVIASDNDPYVPFERAQRLAQRLG--AELIILGGGGH 152 (171)
T ss_dssp TSH---------------------C--C---------HHHCCEEEEEETTBSSS-HHHHHHHHHHHT---EEEEETS-TT
T ss_pred cCc---------------------c--c---------ccCCCeEEEEcCCCCccCHHHHHHHHHHcC--CCeEECCCCCC
Confidence 000 0 0 124777999999999999999999999884 69999999999
Q ss_pred CCCCC
Q 022534 274 MPQED 278 (295)
Q Consensus 274 ~~~~e 278 (295)
+.-.+
T Consensus 153 f~~~~ 157 (171)
T PF06821_consen 153 FNAAS 157 (171)
T ss_dssp SSGGG
T ss_pred ccccc
Confidence 87554
No 96
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=98.98 E-value=1.6e-08 Score=104.94 Aligned_cols=97 Identities=13% Similarity=0.185 Sum_probs=79.2
Q ss_pred ceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEEEEe
Q 022534 36 GTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQ 115 (295)
Q Consensus 36 ~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~ 115 (295)
++++++||+++++..|..+++.|.. +++|+++|+||+|.+... .++++++++++.+.++.+....+++++
T Consensus 1069 ~~l~~lh~~~g~~~~~~~l~~~l~~-~~~v~~~~~~g~~~~~~~-------~~~l~~la~~~~~~i~~~~~~~p~~l~-- 1138 (1296)
T PRK10252 1069 PTLFCFHPASGFAWQFSVLSRYLDP-QWSIYGIQSPRPDGPMQT-------ATSLDEVCEAHLATLLEQQPHGPYHLL-- 1138 (1296)
T ss_pred CCeEEecCCCCchHHHHHHHHhcCC-CCcEEEEECCCCCCCCCC-------CCCHHHHHHHHHHHHHhhCCCCCEEEE--
Confidence 5899999999999999999999975 799999999999866321 347899999999999987656678787
Q ss_pred cccch-HHHHHHHHh---CcCccceeEEEcC
Q 022534 116 GFLVG-SYGLTWALK---NPSRISKLAILNS 142 (295)
Q Consensus 116 G~~~G-~~~~~~a~~---~p~~v~~lil~~~ 142 (295)
|||+| .++..+|.+ +++++..++++++
T Consensus 1139 G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~ 1169 (1296)
T PRK10252 1139 GYSLGGTLAQGIAARLRARGEEVAFLGLLDT 1169 (1296)
T ss_pred EechhhHHHHHHHHHHHHcCCceeEEEEecC
Confidence 77765 467777664 6889999998864
No 97
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.93 E-value=9.4e-08 Score=79.26 Aligned_cols=235 Identities=16% Similarity=0.197 Sum_probs=129.5
Q ss_pred ceeeEEeCcEEEEEEEcCCCC--CCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCC--CCCCC----
Q 022534 12 YGSYIKSGEYRWFVRETGSAD--SRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDK--PEKGY---- 83 (295)
Q Consensus 12 ~~~~~~~~~~~~~~~~~g~~~--~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~--~~~~~---- 83 (295)
.=.|..++|.+|+..-.-+.. ...|.||--||.++..+.|..++. |+..||.|+.+|-||-|.|+. ..+..
T Consensus 58 dvTf~g~~g~rI~gwlvlP~~~~~~~P~vV~fhGY~g~~g~~~~~l~-wa~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~ 136 (321)
T COG3458 58 DVTFTGYGGARIKGWLVLPRHEKGKLPAVVQFHGYGGRGGEWHDMLH-WAVAGYAVFVMDVRGQGSSSQDTADPPGGPSD 136 (321)
T ss_pred EEEEeccCCceEEEEEEeecccCCccceEEEEeeccCCCCCcccccc-ccccceeEEEEecccCCCccccCCCCCCCCcC
Confidence 335666788888877664432 346789999999999888877664 555699999999999998843 11000
Q ss_pred ---------C-CCCCCHHHHHHHHHHHHHHh-CCC---CceEEEEeccc-chHHHHHHHHhCcCccceeEEEcCCCCCCC
Q 022534 84 ---------D-DFDFTENEFHEELDKLLDVL-EVK---YPFFLVVQGFL-VGSYGLTWALKNPSRISKLAILNSPLTASS 148 (295)
Q Consensus 84 ---------~-~~~~~~~~~~~~l~~~~~~l-~~~---~~~~lv~~G~~-~G~~~~~~a~~~p~~v~~lil~~~p~~~~~ 148 (295)
+ ..+|-..+...|+...++.+ ++. ..-+-+. |.| ||++++..|+..| ++++++.. -|....
T Consensus 137 pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~-G~SqGGglalaaaal~~-rik~~~~~-~Pfl~d- 212 (321)
T COG3458 137 PGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVT-GGSQGGGLALAAAALDP-RIKAVVAD-YPFLSD- 212 (321)
T ss_pred CceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEe-ccccCchhhhhhhhcCh-hhhccccc-cccccc-
Confidence 0 00111223345555555543 221 1112222 444 5667666666665 78877654 454332
Q ss_pred CCchhhhhhhcccchhhhhhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcC
Q 022534 149 PLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFS 228 (295)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (295)
.+. .+..+....+. + ..+++....+. ..+....+.-.+....
T Consensus 213 -f~r---~i~~~~~~~yd---e--i~~y~k~h~~~--------------------e~~v~~TL~yfD~~n~--------- 254 (321)
T COG3458 213 -FPR---AIELATEGPYD---E--IQTYFKRHDPK--------------------EAEVFETLSYFDIVNL--------- 254 (321)
T ss_pred -chh---heeecccCcHH---H--HHHHHHhcCch--------------------HHHHHHHHhhhhhhhH---------
Confidence 110 01111111111 0 11222111110 0111111111111111
Q ss_pred CCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHH
Q 022534 229 SGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFL 292 (295)
Q Consensus 229 ~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 292 (295)
+.++++|+|+..|=-|++|++...--.++..+..++..+++.-.|. +-|.-..+.+-.|+.
T Consensus 255 A~RiK~pvL~svgL~D~vcpPstqFA~yN~l~~~K~i~iy~~~aHe---~~p~~~~~~~~~~l~ 315 (321)
T COG3458 255 AARIKVPVLMSVGLMDPVCPPSTQFAAYNALTTSKTIEIYPYFAHE---GGPGFQSRQQVHFLK 315 (321)
T ss_pred HHhhccceEEeecccCCCCCChhhHHHhhcccCCceEEEeeccccc---cCcchhHHHHHHHHH
Confidence 1256899999999999999998776677777777788999887775 444444444555554
No 98
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=98.88 E-value=1.2e-07 Score=85.07 Aligned_cols=246 Identities=13% Similarity=0.201 Sum_probs=131.7
Q ss_pred ceEEEEcCCCCCCcc-chhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEEEE
Q 022534 36 GTIVFLHGAPSHSYS-YRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVV 114 (295)
Q Consensus 36 ~~vv~lHG~~~~~~~-w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~ 114 (295)
||||++==+.++... -+-+++.|.+ |+.|+..|+.--+..... .-.+++++|++-|.++++++|.+ ++++
T Consensus 103 ~pvLiV~Pl~g~~~~L~RS~V~~Ll~-g~dVYl~DW~~p~~vp~~-----~~~f~ldDYi~~l~~~i~~~G~~--v~l~- 173 (406)
T TIGR01849 103 PAVLIVAPMSGHYATLLRSTVEALLP-DHDVYITDWVNARMVPLS-----AGKFDLEDYIDYLIEFIRFLGPD--IHVI- 173 (406)
T ss_pred CcEEEEcCCchHHHHHHHHHHHHHhC-CCcEEEEeCCCCCCCchh-----cCCCCHHHHHHHHHHHHHHhCCC--CcEE-
Confidence 688888777654433 3577788877 999999999866633211 12457899999999999999765 4555
Q ss_pred ecccchH-HHHHH-----HHhCcCccceeEEEcCCCCCCCCCchhhhhh---------h------ccc----chhhhhhh
Q 022534 115 QGFLVGS-YGLTW-----ALKNPSRISKLAILNSPLTASSPLPGLFQQL---------R------IPL----LGEFTAQN 169 (295)
Q Consensus 115 ~G~~~G~-~~~~~-----a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~---------~------~~~----~~~~~~~~ 169 (295)
|++.|+ +++.+ +...|+++++++++.+|.+... .++....+ . .|. .++....-
T Consensus 174 -GvCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~-~p~~v~~~a~~~~i~~~~~~~i~~vp~~~~g~gr~v~PG 251 (406)
T TIGR01849 174 -AVCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARA-SPTVVNELAREKPIEWFQHNVIMRVPFPYPGAGRLVYPG 251 (406)
T ss_pred -EEchhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCC-CCchHHHHhhcccHHHHHHHhhhccCccccCCCCcccCH
Confidence 676543 33322 2235778999999999887432 11111110 0 000 00000000
Q ss_pred HHHHHHHHHhCCC------------ccc--ccccc-c---cccccccccCCchhHHHHHHHhcchhhhhH--hhh---cC
Q 022534 170 AIMAERFIEAGSP------------YVL--KLDKA-D---VYRLPYLASSGPGFALLEAARKVNFKDISS--RIG---AG 226 (295)
Q Consensus 170 ~~~~~~~~~~~~~------------~~~--~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~ 226 (295)
..+...|... .+ .+. +.... + .+..-.....-++..+.+.++..-....+. .+. ..
T Consensus 252 ~~~~~~F~~m-np~r~~~~~~~~~~~l~~gd~~~~~~~~~f~~~y~d~~dlpge~y~~~v~~vf~~n~L~~G~l~v~G~~ 330 (406)
T TIGR01849 252 FLQLAGFISM-NLDRHTKAHSDFFLHLVKGDGQEADKHRIFYDEYLAVMDMTAEFYLQTIDVVFQQFLLPQGKFIVEGKR 330 (406)
T ss_pred HHHHHHHHHc-CcchHHHHHHHHHHHHhcCCcchHHHHHHHHHHhhhccCCcHHHHHHHHHHHHHhCCccCCcEEECCEE
Confidence 0011111110 00 000 00000 0 000000001112222222221110000000 000 00
Q ss_pred cCCCCCC-CcEEEEEeCCCCCCCcchHHHHHhcC---C-CCeEEEEecCCCCCCCC---CChHHHHHHHHHHHHh
Q 022534 227 FSSGSWD-KPVLVAWGISDKYLPQSVAEEFQKGN---P-NVVKLQMIEGAGHMPQE---DWPEKVVDGLRYFFLN 293 (295)
Q Consensus 227 ~~~~~~~-~P~l~i~G~~D~~~~~~~~~~~~~~~---~-~~~~~~~i~~~gH~~~~---e~p~~~~~~i~~fl~~ 293 (295)
...++++ +|+|.|.|++|.++++..+..+...+ + .+++.++.+++||.-.. ..++++.-.|.+||..
T Consensus 331 Vdl~~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~~i~P~i~~wl~~ 405 (406)
T TIGR01849 331 VDPGAITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFREEIYPLVREFIRR 405 (406)
T ss_pred ecHHHCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhhhhchHHHHHHHh
Confidence 1123678 99999999999999998888887764 4 34567888899997544 3578888999999864
No 99
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.87 E-value=3.4e-07 Score=70.04 Aligned_cols=181 Identities=19% Similarity=0.251 Sum_probs=115.0
Q ss_pred CceEEEEcCCCC--CCccchhhHHHhhhCCCeEEEeCCCCCC--CCC--CCCCCCCCCCCCHHHHHHHHHHHHHHhCCCC
Q 022534 35 LGTIVFLHGAPS--HSYSYRNVMSQMSDAGFHCFAPDWLGFG--FSD--KPEKGYDDFDFTENEFHEELDKLLDVLEVKY 108 (295)
Q Consensus 35 ~~~vv~lHG~~~--~~~~w~~~~~~l~~~~~~via~Dl~G~G--~S~--~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~ 108 (295)
..+||+-||.+. ++.+...++..|+.+|+.|.-+.++=.- +++ +|.+.. . . -...|...++++.+.+.. .
T Consensus 14 ~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~-~-t-~~~~~~~~~aql~~~l~~-g 89 (213)
T COG3571 14 PVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGS-G-T-LNPEYIVAIAQLRAGLAE-G 89 (213)
T ss_pred CEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCcc-c-c-CCHHHHHHHHHHHhcccC-C
Confidence 358999999764 6667788888999899999999876322 111 122111 1 1 125788888898887643 3
Q ss_pred ceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHHhCCCccccc
Q 022534 109 PFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKL 187 (295)
Q Consensus 109 ~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (295)
|. +.+|+|+| -.+.++|..-...|++|++++-|+-++. +|...
T Consensus 90 pL--i~GGkSmGGR~aSmvade~~A~i~~L~clgYPfhppG--------------------------------KPe~~-- 133 (213)
T COG3571 90 PL--IIGGKSMGGRVASMVADELQAPIDGLVCLGYPFHPPG--------------------------------KPEQL-- 133 (213)
T ss_pred ce--eeccccccchHHHHHHHhhcCCcceEEEecCccCCCC--------------------------------Ccccc--
Confidence 53 44577775 5677777665556999999876554321 11000
Q ss_pred cccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEE
Q 022534 188 DKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQM 267 (295)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~ 267 (295)
+ ...+ ..+++|+|+.+|+.|.+-..+....+ .++..+++++
T Consensus 134 ------R----------------------t~HL---------~gl~tPtli~qGtrD~fGtr~~Va~y--~ls~~iev~w 174 (213)
T COG3571 134 ------R----------------------TEHL---------TGLKTPTLITQGTRDEFGTRDEVAGY--ALSDPIEVVW 174 (213)
T ss_pred ------h----------------------hhhc---------cCCCCCeEEeecccccccCHHHHHhh--hcCCceEEEE
Confidence 0 0000 14579999999999998766544333 2334489999
Q ss_pred ecCCCCCC----------CCCChHHHHHHHHHHHHhc
Q 022534 268 IEGAGHMP----------QEDWPEKVVDGLRYFFLNY 294 (295)
Q Consensus 268 i~~~gH~~----------~~e~p~~~~~~i~~fl~~~ 294 (295)
++++.|-. +.++-...++.|..|...+
T Consensus 175 l~~adHDLkp~k~vsgls~~~hL~~~A~~va~~~~~l 211 (213)
T COG3571 175 LEDADHDLKPRKLVSGLSTADHLKTLAEQVAGWARRL 211 (213)
T ss_pred eccCccccccccccccccHHHHHHHHHHHHHHHHhhc
Confidence 99999943 1223356677777777653
No 100
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=98.86 E-value=2.5e-07 Score=72.97 Aligned_cols=172 Identities=17% Similarity=0.213 Sum_probs=106.2
Q ss_pred CCceEEEEcCCCC-----CCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCC
Q 022534 34 RLGTIVFLHGAPS-----HSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKY 108 (295)
Q Consensus 34 ~~~~vv~lHG~~~-----~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~ 108 (295)
..|..|.+|=.+. +...=..++..|.++||.++-+|+||-|+|+..-.. ...+-+=+..+.++++..+-+.
T Consensus 27 ~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~----GiGE~~Da~aaldW~~~~hp~s 102 (210)
T COG2945 27 AAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDN----GIGELEDAAAALDWLQARHPDS 102 (210)
T ss_pred CCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccC----CcchHHHHHHHHHHHHhhCCCc
Confidence 4578888885442 333333555567788999999999999999974321 1111122334445555555444
Q ss_pred ce-EEEEecccchH-HHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHHhCCCcccc
Q 022534 109 PF-FLVVQGFLVGS-YGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLK 186 (295)
Q Consensus 109 ~~-~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (295)
+. .+ .|+|-|+ +++.+|.+.|+. ...+.. +|... . ..|
T Consensus 103 ~~~~l--~GfSFGa~Ia~~la~r~~e~-~~~is~-~p~~~------~--------------------~df---------- 142 (210)
T COG2945 103 ASCWL--AGFSFGAYIAMQLAMRRPEI-LVFISI-LPPIN------A--------------------YDF---------- 142 (210)
T ss_pred hhhhh--cccchHHHHHHHHHHhcccc-cceeec-cCCCC------c--------------------hhh----------
Confidence 43 23 2788775 577888888873 222222 11100 0 000
Q ss_pred ccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEE
Q 022534 187 LDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQ 266 (295)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~ 266 (295)
.. ++ .-.+|.++|+|+.|.+++.+...+.++..+ .+++
T Consensus 143 -------------------s~--------l~-------------P~P~~~lvi~g~~Ddvv~l~~~l~~~~~~~--~~~i 180 (210)
T COG2945 143 -------------------SF--------LA-------------PCPSPGLVIQGDADDVVDLVAVLKWQESIK--ITVI 180 (210)
T ss_pred -------------------hh--------cc-------------CCCCCceeEecChhhhhcHHHHHHhhcCCC--CceE
Confidence 00 00 125899999999999988776666666643 5899
Q ss_pred EecCCCCCCCCCChHHHHHHHHHHHH
Q 022534 267 MIEGAGHMPQEDWPEKVVDGLRYFFL 292 (295)
Q Consensus 267 ~i~~~gH~~~~e~p~~~~~~i~~fl~ 292 (295)
.++++.|+.+- +-+.+.+.|.+|+.
T Consensus 181 ~i~~a~HFF~g-Kl~~l~~~i~~~l~ 205 (210)
T COG2945 181 TIPGADHFFHG-KLIELRDTIADFLE 205 (210)
T ss_pred EecCCCceecc-cHHHHHHHHHHHhh
Confidence 99999999764 45667788888874
No 101
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.85 E-value=4.9e-07 Score=75.96 Aligned_cols=179 Identities=23% Similarity=0.326 Sum_probs=115.0
Q ss_pred ceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCC-CCCCCCC--CC-CCC---CCCCHHHHHHHHHHHHHHhC---
Q 022534 36 GTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGF-GFSDKPE--KG-YDD---FDFTENEFHEELDKLLDVLE--- 105 (295)
Q Consensus 36 ~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~-G~S~~~~--~~-~~~---~~~~~~~~~~~l~~~~~~l~--- 105 (295)
|.||++|++.+-....+.+...|+..||-|++||+-+. |.+.... .. ... ...+......|+...++.+.
T Consensus 28 P~VIv~hei~Gl~~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~ 107 (236)
T COG0412 28 PGVIVLHEIFGLNPHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYLARQP 107 (236)
T ss_pred CEEEEEecccCCchHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHHHhCC
Confidence 79999999988888889999999999999999999873 3333211 00 000 00112456777777777663
Q ss_pred -C-CCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHHhCCC
Q 022534 106 -V-KYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSP 182 (295)
Q Consensus 106 -~-~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (295)
. .+.+.++ |+++| .+++.++.+.| .|++.+..-. .... .
T Consensus 108 ~~~~~~ig~~--GfC~GG~~a~~~a~~~~-~v~a~v~fyg-~~~~----------------------------------~ 149 (236)
T COG0412 108 QVDPKRIGVV--GFCMGGGLALLAATRAP-EVKAAVAFYG-GLIA----------------------------------D 149 (236)
T ss_pred CCCCceEEEE--EEcccHHHHHHhhcccC-CccEEEEecC-CCCC----------------------------------C
Confidence 1 1224343 88765 56777777776 6777765421 0000 0
Q ss_pred ccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCC-
Q 022534 183 YVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPN- 261 (295)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~- 261 (295)
.. .+ ..++++|+|+++|+.|+.++......+.+.+..
T Consensus 150 ~~--------------------------------~~----------~~~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~ 187 (236)
T COG0412 150 DT--------------------------------AD----------APKIKVPVLLHLAGEDPYIPAADVDALAAALEDA 187 (236)
T ss_pred cc--------------------------------cc----------cccccCcEEEEecccCCCCChhHHHHHHHHHHhc
Confidence 00 00 015589999999999999988766666544332
Q ss_pred --CeEEEEecCCCCCCCCCC-----------hHHHHHHHHHHHHhc
Q 022534 262 --VVKLQMIEGAGHMPQEDW-----------PEKVVDGLRYFFLNY 294 (295)
Q Consensus 262 --~~~~~~i~~~gH~~~~e~-----------p~~~~~~i~~fl~~~ 294 (295)
..++.+++++.|-.+.+. .+...+.+.+|+.+.
T Consensus 188 ~~~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~ 233 (236)
T COG0412 188 GVKVDLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRL 233 (236)
T ss_pred CCCeeEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHh
Confidence 378999999999776432 246667777777653
No 102
>PRK10115 protease 2; Provisional
Probab=98.78 E-value=5.8e-07 Score=86.86 Aligned_cols=123 Identities=15% Similarity=0.045 Sum_probs=72.7
Q ss_pred EeCcEEEEEEE-cCC---CCCCCceEEEEcCCCCCCc--cchhhHHHhhhCCCeEEEeCCCCCCCCCCCC---CCCCCCC
Q 022534 17 KSGEYRWFVRE-TGS---ADSRLGTIVFLHGAPSHSY--SYRNVMSQMSDAGFHCFAPDWLGFGFSDKPE---KGYDDFD 87 (295)
Q Consensus 17 ~~~~~~~~~~~-~g~---~~~~~~~vv~lHG~~~~~~--~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~---~~~~~~~ 87 (295)
+.+|.++.+.. +.+ .+.++|.||++||.++.+. .|......|.++||-|+.++.||-|.=.+.- .......
T Consensus 423 s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~~~g~~~~k~ 502 (686)
T PRK10115 423 ARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKK 502 (686)
T ss_pred CCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHHHhhhhhcCC
Confidence 44677766522 211 2234689999999887664 4666667788889999999999977554310 0000001
Q ss_pred CCHHHHHHHHHHHHHHhCCCCceEEEEecccchHHHHHHH-HhCcCccceeEEE
Q 022534 88 FTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWA-LKNPSRISKLAIL 140 (295)
Q Consensus 88 ~~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G~~~~~~a-~~~p~~v~~lil~ 140 (295)
-+.+|++..+..++++ +.-.+--|.+.|.|-|++...++ .++|+++++.|..
T Consensus 503 ~~~~D~~a~~~~Lv~~-g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~ 555 (686)
T PRK10115 503 NTFNDYLDACDALLKL-GYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQ 555 (686)
T ss_pred CcHHHHHHHHHHHHHc-CCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEec
Confidence 1445666666656554 43222223334556555433333 4689999988765
No 103
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=98.77 E-value=1.6e-06 Score=79.89 Aligned_cols=124 Identities=21% Similarity=0.367 Sum_probs=72.7
Q ss_pred ceeeEEeC----cEEEEEEEcCC--CCCCCceEEEEcCCCCCCccchhhH------------------HHhhhCCCeEEE
Q 022534 12 YGSYIKSG----EYRWFVRETGS--ADSRLGTIVFLHGAPSHSYSYRNVM------------------SQMSDAGFHCFA 67 (295)
Q Consensus 12 ~~~~~~~~----~~~~~~~~~g~--~~~~~~~vv~lHG~~~~~~~w~~~~------------------~~l~~~~~~via 67 (295)
+.-+++++ +..+||..+.. .....|.+|+++|+|+++..+-.+. --|.+ ...++.
T Consensus 48 ~sGy~~v~~~~~~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~-~~~~l~ 126 (462)
T PTZ00472 48 WSGYFDIPGNQTDKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNN-EAYVIY 126 (462)
T ss_pred eeEEEEeCCCCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCccccc-ccCeEE
Confidence 44566664 34555544432 2234689999999998886652221 01333 479999
Q ss_pred eCCC-CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-----CC-CCceEEEEecccch-HHHHHHHH---hCc-----
Q 022534 68 PDWL-GFGFSDKPEKGYDDFDFTENEFHEELDKLLDVL-----EV-KYPFFLVVQGFLVG-SYGLTWAL---KNP----- 131 (295)
Q Consensus 68 ~Dl~-G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l-----~~-~~~~~lv~~G~~~G-~~~~~~a~---~~p----- 131 (295)
+|+| |+|.|......+ ..+.++.++|+.++++.+ .. +.+++|+ |+|.| .++-.+|. ++.
T Consensus 127 iDqP~G~G~S~~~~~~~---~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~--GeSygG~y~p~~a~~i~~~n~~~~~ 201 (462)
T PTZ00472 127 VDQPAGVGFSYADKADY---DHNESEVSEDMYNFLQAFFGSHEDLRANDLFVV--GESYGGHYAPATAYRINMGNKKGDG 201 (462)
T ss_pred EeCCCCcCcccCCCCCC---CCChHHHHHHHHHHHHHHHHhCccccCCCEEEE--eecchhhhHHHHHHHHHhhccccCC
Confidence 9986 888887543222 224567788888887754 11 3567777 56654 45544432 111
Q ss_pred --CccceeEEEc
Q 022534 132 --SRISKLAILN 141 (295)
Q Consensus 132 --~~v~~lil~~ 141 (295)
=+++++++-+
T Consensus 202 ~~inLkGi~IGN 213 (462)
T PTZ00472 202 LYINLAGLAVGN 213 (462)
T ss_pred ceeeeEEEEEec
Confidence 1477777654
No 104
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=98.77 E-value=4.3e-06 Score=68.63 Aligned_cols=225 Identities=20% Similarity=0.200 Sum_probs=101.9
Q ss_pred eEEe-CcEEEEEEEcCCCC---CCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCC-CCCCCCCCCCCCCCCC
Q 022534 15 YIKS-GEYRWFVRETGSAD---SRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGF-GFSDKPEKGYDDFDFT 89 (295)
Q Consensus 15 ~~~~-~~~~~~~~~~g~~~---~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~-G~S~~~~~~~~~~~~~ 89 (295)
.+.. +|..|++++..|.. ..+++||+.-||+..-..+..++++|+..||+|+-||-.-| |.|++... +|+
T Consensus 6 vi~~~~~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrmdh~agLA~YL~~NGFhViRyDsl~HvGlSsG~I~-----eft 80 (294)
T PF02273_consen 6 VIRLEDGRQIRVWETRPKNNEPKRNNTILIAPGFARRMDHFAGLAEYLSANGFHVIRYDSLNHVGLSSGDIN-----EFT 80 (294)
T ss_dssp EEEETTTEEEEEEEE---TTS---S-EEEEE-TT-GGGGGGHHHHHHHHTTT--EEEE---B------------------
T ss_pred eeEcCCCCEEEEeccCCCCCCcccCCeEEEecchhHHHHHHHHHHHHHhhCCeEEEeccccccccCCCCChh-----hcc
Confidence 3444 57899998876533 23589999999999999999999999989999999998876 78886432 457
Q ss_pred HHHHHHHHHHHHHHh---CCCCceEEEEecccchHHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhh
Q 022534 90 ENEFHEELDKLLDVL---EVKYPFFLVVQGFLVGSYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFT 166 (295)
Q Consensus 90 ~~~~~~~l~~~~~~l---~~~~~~~lv~~G~~~G~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~ 166 (295)
++.-..++..+++.+ |..+ +-|++.+ +.|-+|...|. .++ +.-||...... .+...+...+...+.
T Consensus 81 ms~g~~sL~~V~dwl~~~g~~~-~GLIAaS-LSaRIAy~Va~-~i~-lsfLitaVGVV-------nlr~TLe~al~~Dyl 149 (294)
T PF02273_consen 81 MSIGKASLLTVIDWLATRGIRR-IGLIAAS-LSARIAYEVAA-DIN-LSFLITAVGVV-------NLRDTLEKALGYDYL 149 (294)
T ss_dssp HHHHHHHHHHHHHHHHHTT----EEEEEET-THHHHHHHHTT-TS---SEEEEES--S--------HHHHHHHHHSS-GG
T ss_pred hHHhHHHHHHHHHHHHhcCCCc-chhhhhh-hhHHHHHHHhh-ccC-cceEEEEeeee-------eHHHHHHHHhccchh
Confidence 777777777666655 4444 4455432 23445555555 333 45455442111 111110000000000
Q ss_pred hhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhh---hHhhhcCcCCCCCCCcEEEEEeCC
Q 022534 167 AQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDI---SSRIGAGFSSGSWDKPVLVAWGIS 243 (295)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~P~l~i~G~~ 243 (295)
. .+.+ ..| +..+...... ....+.....+..+.++ .+++ +.+++|++.+++++
T Consensus 150 ~-------~~i~-~lp-----~dldfeGh~l-----~~~vFv~dc~e~~w~~l~ST~~~~------k~l~iP~iaF~A~~ 205 (294)
T PF02273_consen 150 Q-------LPIE-QLP-----EDLDFEGHNL-----GAEVFVTDCFEHGWDDLDSTINDM------KRLSIPFIAFTAND 205 (294)
T ss_dssp G-------S-GG-G-------SEEEETTEEE-----EHHHHHHHHHHTT-SSHHHHHHHH------TT--S-EEEEEETT
T ss_pred h-------cchh-hCC-----Cccccccccc-----chHHHHHHHHHcCCccchhHHHHH------hhCCCCEEEEEeCC
Confidence 0 0000 000 0000000000 00123333333332222 2222 26799999999999
Q ss_pred CCCCCcchHHHHHhcC-CCCeEEEEecCCCCCCCCCCh
Q 022534 244 DKYLPQSVAEEFQKGN-PNVVKLQMIEGAGHMPQEDWP 280 (295)
Q Consensus 244 D~~~~~~~~~~~~~~~-~~~~~~~~i~~~gH~~~~e~p 280 (295)
|-++......++...+ .+.+++..++|++|-.. |+|
T Consensus 206 D~WV~q~eV~~~~~~~~s~~~klysl~Gs~HdL~-enl 242 (294)
T PF02273_consen 206 DDWVKQSEVEELLDNINSNKCKLYSLPGSSHDLG-ENL 242 (294)
T ss_dssp -TTS-HHHHHHHHTT-TT--EEEEEETT-SS-TT-SSH
T ss_pred CccccHHHHHHHHHhcCCCceeEEEecCccchhh-hCh
Confidence 9999888777776543 34589999999999864 444
No 105
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.75 E-value=4.2e-07 Score=73.77 Aligned_cols=249 Identities=20% Similarity=0.279 Sum_probs=121.2
Q ss_pred CcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHH-HHH
Q 022534 19 GEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFH-EEL 97 (295)
Q Consensus 19 ~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~-~~l 97 (295)
+|+.+-.+.+.........+++--+.+--..-|+.+++..+++||.|.++|+||-|.|+.+... ...+...|++ .|+
T Consensus 14 DG~~l~~~~~pA~~~~~g~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~--~~~~~~~DwA~~D~ 91 (281)
T COG4757 14 DGYSLPGQRFPADGKASGRLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLS--GSQWRYLDWARLDF 91 (281)
T ss_pred CCccCccccccCCCCCCCcEEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCCccccc--cCccchhhhhhcch
Confidence 4555555544432222224554444555666788899999889999999999999999965432 2223333433 344
Q ss_pred HHHHHHhC---CCCceEEEEecccchHHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchh-----hhhhh
Q 022534 98 DKLLDVLE---VKYPFFLVVQGFLVGSYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGE-----FTAQN 169 (295)
Q Consensus 98 ~~~~~~l~---~~~~~~lv~~G~~~G~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 169 (295)
...++.+. -..|...| |||.|.=++.++..+| +...-.+.++... -..+.++...++.-.+.. +....
T Consensus 92 ~aal~~~~~~~~~~P~y~v--gHS~GGqa~gL~~~~~-k~~a~~vfG~gag-wsg~m~~~~~l~~~~l~~lv~p~lt~w~ 167 (281)
T COG4757 92 PAALAALKKALPGHPLYFV--GHSFGGQALGLLGQHP-KYAAFAVFGSGAG-WSGWMGLRERLGAVLLWNLVGPPLTFWK 167 (281)
T ss_pred HHHHHHHHhhCCCCceEEe--eccccceeecccccCc-ccceeeEeccccc-cccchhhhhcccceeeccccccchhhcc
Confidence 44444332 34566666 6776642233334555 4444444432111 111111111111100000 00000
Q ss_pred HHHHHHHHHhCCCccccccccccc---cccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCC
Q 022534 170 AIMAERFIEAGSPYVLKLDKADVY---RLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKY 246 (295)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~ 246 (295)
..+...+...+.... ....++.. +.|..-..+| ...+.++.. +++.+|+.++...+|+.
T Consensus 168 g~~p~~l~G~G~d~p-~~v~RdW~RwcR~p~y~fddp--------~~~~~~q~y---------aaVrtPi~~~~~~DD~w 229 (281)
T COG4757 168 GYMPKDLLGLGSDLP-GTVMRDWARWCRHPRYYFDDP--------AMRNYRQVY---------AAVRTPITFSRALDDPW 229 (281)
T ss_pred ccCcHhhcCCCccCc-chHHHHHHHHhcCccccccCh--------hHhHHHHHH---------HHhcCceeeeccCCCCc
Confidence 011111111110000 00000000 0010000000 000111111 15589999999999999
Q ss_pred CCcchHHHHHhcCCC-CeEEEEecCC----CCCCCCCCh-HHHHHHHHHHH
Q 022534 247 LPQSVAEEFQKGNPN-VVKLQMIEGA----GHMPQEDWP-EKVVDGLRYFF 291 (295)
Q Consensus 247 ~~~~~~~~~~~~~~~-~~~~~~i~~~----gH~~~~e~p-~~~~~~i~~fl 291 (295)
+|++..+.+.+..++ ..+...++.+ ||+-..-+| |.+.+.+..|+
T Consensus 230 ~P~As~d~f~~~y~nApl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 230 APPASRDAFASFYRNAPLEMRDLPRAEGPLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred CCHHHHHHHHHhhhcCcccceecCcccCcccchhhhccchHHHHHHHHHhh
Confidence 999999888776554 2355555554 998776666 77777777665
No 106
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=98.68 E-value=4.1e-06 Score=67.60 Aligned_cols=180 Identities=19% Similarity=0.250 Sum_probs=96.2
Q ss_pred EEEEcCCCCCCccch--hhHHHhhhCC--CeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEEE
Q 022534 38 IVFLHGAPSHSYSYR--NVMSQMSDAG--FHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLV 113 (295)
Q Consensus 38 vv~lHG~~~~~~~w~--~~~~~l~~~~--~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv 113 (295)
|++||||.++..+.+ .+.+.+++.+ .++..+|++- ..+...+.+.++++....+. +.||
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~~----------------~p~~a~~~l~~~i~~~~~~~-~~li 64 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLPP----------------FPEEAIAQLEQLIEELKPEN-VVLI 64 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCCc----------------CHHHHHHHHHHHHHhCCCCC-eEEE
Confidence 899999998887765 4445565432 4566666651 23455677788888775444 5566
Q ss_pred EecccchH-HHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHHhCCCcccccccccc
Q 022534 114 VQGFLVGS-YGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADV 192 (295)
Q Consensus 114 ~~G~~~G~-~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (295)
|+|+|+ +|..+|.+++ +++ |++++...+. ..+ ..++.....+.+. +.
T Consensus 65 --GSSlGG~~A~~La~~~~--~~a-vLiNPav~p~----~~l-------------------~~~iG~~~~~~~~----e~ 112 (187)
T PF05728_consen 65 --GSSLGGFYATYLAERYG--LPA-VLINPAVRPY----ELL-------------------QDYIGEQTNPYTG----ES 112 (187)
T ss_pred --EEChHHHHHHHHHHHhC--CCE-EEEcCCCCHH----HHH-------------------HHhhCccccCCCC----cc
Confidence 667665 5777777775 444 5665322210 000 0111110000000 00
Q ss_pred ccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCC
Q 022534 193 YRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAG 272 (295)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~g 272 (295)
+.+. .......+ .+... ..+-..+++++.++.|.+.+...+.... .. +...+.+|.+
T Consensus 113 ~~~~--------~~~~~~l~---------~l~~~--~~~~~~~~lvll~~~DEvLd~~~a~~~~---~~-~~~~i~~ggd 169 (187)
T PF05728_consen 113 YELT--------EEHIEELK---------ALEVP--YPTNPERYLVLLQTGDEVLDYREAVAKY---RG-CAQIIEEGGD 169 (187)
T ss_pred ceec--------hHhhhhcc---------eEecc--ccCCCccEEEEEecCCcccCHHHHHHHh---cC-ceEEEEeCCC
Confidence 0000 00011111 00000 0123579999999999999985443333 23 4555678889
Q ss_pred CCCCCCChHHHHHHHHHHH
Q 022534 273 HMPQEDWPEKVVDGLRYFF 291 (295)
Q Consensus 273 H~~~~e~p~~~~~~i~~fl 291 (295)
|.. +.-++....|.+|+
T Consensus 170 H~f--~~f~~~l~~i~~f~ 186 (187)
T PF05728_consen 170 HSF--QDFEEYLPQIIAFL 186 (187)
T ss_pred CCC--ccHHHHHHHHHHhh
Confidence 976 45566777788876
No 107
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=98.67 E-value=5.9e-07 Score=79.21 Aligned_cols=107 Identities=18% Similarity=0.262 Sum_probs=74.7
Q ss_pred CCceEEEEcCCCCCCccch-----hhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCC
Q 022534 34 RLGTIVFLHGAPSHSYSYR-----NVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKY 108 (295)
Q Consensus 34 ~~~~vv~lHG~~~~~~~w~-----~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~ 108 (295)
.+.|++++|=+.-.-..|+ -++..|.++|+.|+.+|+++=.++.+... . .+|-.+.+...++.+++..+.++
T Consensus 106 ~~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~~~~-~--edYi~e~l~~aid~v~~itg~~~ 182 (445)
T COG3243 106 LKRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLAAKN-L--EDYILEGLSEAIDTVKDITGQKD 182 (445)
T ss_pred CCCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhhhcc-H--HHHHHHHHHHHHHHHHHHhCccc
Confidence 3578999998876666664 45667777899999999998887776331 1 13444566677777777777665
Q ss_pred ceEEEEecccc-hHHHHHHHHhCcCc-cceeEEEcCCCCC
Q 022534 109 PFFLVVQGFLV-GSYGLTWALKNPSR-ISKLAILNSPLTA 146 (295)
Q Consensus 109 ~~~lv~~G~~~-G~~~~~~a~~~p~~-v~~lil~~~p~~~ 146 (295)
+.++ |++. |.+....++.++.+ |++++++.+|.+.
T Consensus 183 -Inli--GyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF 219 (445)
T COG3243 183 -INLI--GYCVGGTLLAAALALMAAKRIKSLTLLTSPVDF 219 (445)
T ss_pred -ccee--eEecchHHHHHHHHhhhhcccccceeeecchhh
Confidence 5666 7754 55554445555555 9999999888754
No 108
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=98.60 E-value=1.8e-06 Score=73.87 Aligned_cols=107 Identities=22% Similarity=0.323 Sum_probs=81.9
Q ss_pred CceEEEEcCCCCCCccchhhHHHhhh---CCCeEEEeCCCCCCCCCCCCC-CCCCCCCCHHHHHHHHHHHHHHhCC----
Q 022534 35 LGTIVFLHGAPSHSYSYRNVMSQMSD---AGFHCFAPDWLGFGFSDKPEK-GYDDFDFTENEFHEELDKLLDVLEV---- 106 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~~w~~~~~~l~~---~~~~via~Dl~G~G~S~~~~~-~~~~~~~~~~~~~~~l~~~~~~l~~---- 106 (295)
+..++|+-|.||-..-|.+++..|.+ ..|.|++..+.||-.++.... ..+...|+++++++.-.++++++-.
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~~ 81 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKNK 81 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhcC
Confidence 45799999999999999999988873 379999999999998876410 0113367899999888888887633
Q ss_pred -CCceEEEEecccchHH-HHHHHHhCc---CccceeEEEcCCC
Q 022534 107 -KYPFFLVVQGFLVGSY-GLTWALKNP---SRISKLAILNSPL 144 (295)
Q Consensus 107 -~~~~~lv~~G~~~G~~-~~~~a~~~p---~~v~~lil~~~p~ 144 (295)
+.+++|+ |||.|++ ++.+..+++ .+|++.+++ .|.
T Consensus 82 ~~~~liLi--GHSIGayi~levl~r~~~~~~~V~~~~lL-fPT 121 (266)
T PF10230_consen 82 PNVKLILI--GHSIGAYIALEVLKRLPDLKFRVKKVILL-FPT 121 (266)
T ss_pred CCCcEEEE--eCcHHHHHHHHHHHhccccCCceeEEEEe-CCc
Confidence 3346666 8899985 677777888 688888887 454
No 109
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=98.58 E-value=3.7e-06 Score=75.32 Aligned_cols=131 Identities=17% Similarity=0.258 Sum_probs=81.2
Q ss_pred cccceeeEEe-CcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhh-----HHH-hhhCCCeEEEeCCCCCCCCCCCC-
Q 022534 9 GREYGSYIKS-GEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNV-----MSQ-MSDAGFHCFAPDWLGFGFSDKPE- 80 (295)
Q Consensus 9 ~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~-----~~~-l~~~~~~via~Dl~G~G~S~~~~- 80 (295)
++.+-..|.. +|+.+..+-.--+..++|+|++.||..+++..|-.. +++ |+++||.|..-..||--.|.+..
T Consensus 46 y~~E~h~V~T~DgYiL~lhRIp~~~~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h~~ 125 (403)
T KOG2624|consen 46 YPVEEHEVTTEDGYILTLHRIPRGKKKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKHKK 125 (403)
T ss_pred CceEEEEEEccCCeEEEEeeecCCCCCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchhhcc
Confidence 3333444444 677776654422225679999999999999999644 233 67789999999999988886421
Q ss_pred --C--CCCCCCCCHHHHH-HHHHHHHHHh----CCCCceEEEEecccchHHH-HHHHHhCcC---ccceeEEEcC
Q 022534 81 --K--GYDDFDFTENEFH-EELDKLLDVL----EVKYPFFLVVQGFLVGSYG-LTWALKNPS---RISKLAILNS 142 (295)
Q Consensus 81 --~--~~~~~~~~~~~~~-~~l~~~~~~l----~~~~~~~lv~~G~~~G~~~-~~~a~~~p~---~v~~lil~~~ 142 (295)
+ ..+-.++|..+++ -||-++++.+ +.+ +++.+ |||-|+.. ...+..+|+ +|+..+++++
T Consensus 126 l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~-kl~yv--GHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP 197 (403)
T KOG2624|consen 126 LSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQE-KLHYV--GHSQGTTTFFVMLSERPEYNKKIKSFIALAP 197 (403)
T ss_pred cCCcCCcceeecchhhhhhcCHHHHHHHHHHhcccc-ceEEE--EEEccchhheehhcccchhhhhhheeeeecc
Confidence 1 1112255655543 4666666654 334 46666 77777543 233344544 7888888843
No 110
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.58 E-value=2.2e-06 Score=72.03 Aligned_cols=98 Identities=26% Similarity=0.399 Sum_probs=62.7
Q ss_pred CceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-h---------
Q 022534 35 LGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDV-L--------- 104 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~-l--------- 104 (295)
=|++||+||+......|..++.+++..||-|+++|+...+..+... .+ ..+..+.+|+.. +
T Consensus 17 yPVv~f~~G~~~~~s~Ys~ll~hvAShGyIVV~~d~~~~~~~~~~~--------~~-~~~~~vi~Wl~~~L~~~l~~~v~ 87 (259)
T PF12740_consen 17 YPVVLFLHGFLLINSWYSQLLEHVASHGYIVVAPDLYSIGGPDDTD--------EV-ASAAEVIDWLAKGLESKLPLGVK 87 (259)
T ss_pred cCEEEEeCCcCCCHHHHHHHHHHHHhCceEEEEecccccCCCCcch--------hH-HHHHHHHHHHHhcchhhcccccc
Confidence 3799999999976666889999999999999999977644322110 12 223333343332 1
Q ss_pred -CCCCceEEEEecccchH-HHHHHHHhC-----cCccceeEEEcCCCC
Q 022534 105 -EVKYPFFLVVQGFLVGS-YGLTWALKN-----PSRISKLAILNSPLT 145 (295)
Q Consensus 105 -~~~~~~~lv~~G~~~G~-~~~~~a~~~-----p~~v~~lil~~~p~~ 145 (295)
+..+ +.| .|||-|+ .+...++.+ +.+++++++++ |..
T Consensus 88 ~D~s~-l~l--~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lD-PVd 131 (259)
T PF12740_consen 88 PDFSK-LAL--AGHSRGGKVAFAMALGNASSSLDLRFSALILLD-PVD 131 (259)
T ss_pred ccccc-eEE--eeeCCCCHHHHHHHhhhcccccccceeEEEEec-ccc
Confidence 1122 333 3788654 555666665 56899999885 444
No 111
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=98.54 E-value=9.4e-07 Score=73.70 Aligned_cols=103 Identities=20% Similarity=0.271 Sum_probs=65.1
Q ss_pred CceEEEEcCCCCCCccchhhHHHhh--------hCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHH----HHHHHHHHHH
Q 022534 35 LGTIVFLHGAPSHSYSYRNVMSQMS--------DAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENE----FHEELDKLLD 102 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~~w~~~~~~l~--------~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~----~~~~l~~~~~ 102 (295)
+.||||+||.+++...|+.+...+. ...+++++.|+....-.-.. ..+.+ ..+.+..+++
T Consensus 4 g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g--------~~l~~q~~~~~~~i~~i~~ 75 (225)
T PF07819_consen 4 GIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHG--------RTLQRQAEFLAEAIKYILE 75 (225)
T ss_pred CCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCcccccccc--------ccHHHHHHHHHHHHHHHHH
Confidence 4599999999999888877765552 22588999998765322111 02222 2334444444
Q ss_pred Hh----CCCCceEEEEecccchHHHHHHHHhC----cCccceeEEEcCCCCCC
Q 022534 103 VL----EVKYPFFLVVQGFLVGSYGLTWALKN----PSRISKLAILNSPLTAS 147 (295)
Q Consensus 103 ~l----~~~~~~~lv~~G~~~G~~~~~~a~~~----p~~v~~lil~~~p~~~~ 147 (295)
.. .-.+++++| |||+|++.+..++.. ++.|+.++.+++|....
T Consensus 76 ~~~~~~~~~~~vilV--gHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g~ 126 (225)
T PF07819_consen 76 LYKSNRPPPRSVILV--GHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRGS 126 (225)
T ss_pred hhhhccCCCCceEEE--EEchhhHHHHHHHhccccccccEEEEEEEcCCCCCc
Confidence 44 223457777 778887655554433 35799999999887654
No 112
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=98.38 E-value=1.5e-05 Score=77.81 Aligned_cols=62 Identities=18% Similarity=0.159 Sum_probs=43.5
Q ss_pred CCCCcEEEEEeCCCCCCCcchHHHHHhcC---CCCeEEEEecCCCCCCC-CCChHHHHHHHHHHHHh
Q 022534 231 SWDKPVLVAWGISDKYLPQSVAEEFQKGN---PNVVKLQMIEGAGHMPQ-EDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 231 ~~~~P~l~i~G~~D~~~~~~~~~~~~~~~---~~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~ 293 (295)
++++|+|+|+|..|..+++..+.++.+.+ +...++.+. ..+|... ...+.++.+.+..|+..
T Consensus 453 kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l~-~g~H~~~~~~~~~d~~e~~~~Wfd~ 518 (767)
T PRK05371 453 KIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFLH-QGGHVYPNNWQSIDFRDTMNAWFTH 518 (767)
T ss_pred CCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEEe-CCCccCCCchhHHHHHHHHHHHHHh
Confidence 78999999999999999877665555443 223466554 4578543 34567778888888865
No 113
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=98.37 E-value=3.3e-05 Score=63.86 Aligned_cols=118 Identities=15% Similarity=0.238 Sum_probs=65.7
Q ss_pred EEEEEEEcCCCCCCCceEEEEcCCCCCCccchhh--HHHhhh-CCCeEEEeCCCCCCCCCC-----CCCCCCCCCCCHHH
Q 022534 21 YRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNV--MSQMSD-AGFHCFAPDWLGFGFSDK-----PEKGYDDFDFTENE 92 (295)
Q Consensus 21 ~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~--~~~l~~-~~~~via~Dl~G~G~S~~-----~~~~~~~~~~~~~~ 92 (295)
|++|+-. +.+..+.|.||+|||.+++...+... +..|++ .||-|+.|+...-..+.. ......+.. ....
T Consensus 3 Y~lYvP~-~~~~~~~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~-d~~~ 80 (220)
T PF10503_consen 3 YRLYVPP-GAPRGPVPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGG-DVAF 80 (220)
T ss_pred EEEecCC-CCCCCCCCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCcc-chhh
Confidence 4455433 22222357899999999877654431 233543 489999999753211110 000000000 1122
Q ss_pred HHHHHHHHHHHhCCCC-ceEEEEecccc-hHHHHHHHHhCcCccceeEEEcC
Q 022534 93 FHEELDKLLDVLEVKY-PFFLVVQGFLV-GSYGLTWALKNPSRISKLAILNS 142 (295)
Q Consensus 93 ~~~~l~~~~~~l~~~~-~~~lv~~G~~~-G~~~~~~a~~~p~~v~~lil~~~ 142 (295)
++..+.++.++.+++. .+++. |+|. |+++..++..|||.+.++.+.+.
T Consensus 81 i~~lv~~v~~~~~iD~~RVyv~--G~S~Gg~ma~~la~~~pd~faa~a~~sG 130 (220)
T PF10503_consen 81 IAALVDYVAARYNIDPSRVYVT--GLSNGGMMANVLACAYPDLFAAVAVVSG 130 (220)
T ss_pred HHHHHHhHhhhcccCCCceeeE--EECHHHHHHHHHHHhCCccceEEEeecc
Confidence 3444555555555542 24444 6765 46788889999999999887754
No 114
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=98.35 E-value=5.7e-06 Score=68.17 Aligned_cols=95 Identities=19% Similarity=0.323 Sum_probs=49.4
Q ss_pred EEEEcCCC---CCCccchhhHHHhhh-CCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---hCCC-Cc
Q 022534 38 IVFLHGAP---SHSYSYRNVMSQMSD-AGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDV---LEVK-YP 109 (295)
Q Consensus 38 vv~lHG~~---~~~~~w~~~~~~l~~-~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~---l~~~-~~ 109 (295)
||++||++ ++......+...|++ .|+.|+.+|.|=. |...+ .-.++|..+.+..+++. ++.+ ..
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~-----p~~~~---p~~~~D~~~a~~~l~~~~~~~~~d~~~ 72 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLA-----PEAPF---PAALEDVKAAYRWLLKNADKLGIDPER 72 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---T-----TTSST---THHHHHHHHHHHHHHHTHHHHTEEEEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeecccc-----ccccc---cccccccccceeeeccccccccccccc
Confidence 78999975 344444455566664 6999999999933 22111 11234444444445554 2222 23
Q ss_pred eEEEEecccc-hHHHHHHHHhCcC----ccceeEEEcC
Q 022534 110 FFLVVQGFLV-GSYGLTWALKNPS----RISKLAILNS 142 (295)
Q Consensus 110 ~~lv~~G~~~-G~~~~~~a~~~p~----~v~~lil~~~ 142 (295)
++++ |+|. |.+++.++.+..+ .+++++++++
T Consensus 73 i~l~--G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p 108 (211)
T PF07859_consen 73 IVLI--GDSAGGHLALSLALRARDRGLPKPKGIILISP 108 (211)
T ss_dssp EEEE--EETHHHHHHHHHHHHHHHTTTCHESEEEEESC
T ss_pred eEEe--ecccccchhhhhhhhhhhhcccchhhhhcccc
Confidence 5665 6665 4577666553222 4788888743
No 115
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=98.34 E-value=5.9e-06 Score=66.92 Aligned_cols=64 Identities=17% Similarity=0.306 Sum_probs=47.0
Q ss_pred CCCCcEEEEEeCCCCCCCcchHHHHHhcCCCC----eEEEEecCCCCCCC-----CCCh------HHHHHHHHHHHHhc
Q 022534 231 SWDKPVLVAWGISDKYLPQSVAEEFQKGNPNV----VKLQMIEGAGHMPQ-----EDWP------EKVVDGLRYFFLNY 294 (295)
Q Consensus 231 ~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~----~~~~~i~~~gH~~~-----~e~p------~~~~~~i~~fl~~~ 294 (295)
..++|+|++.|+.|..+|++....+.+.+.+. .++.++++.+|-.+ .+.| |+....+.+|+.+|
T Consensus 162 ~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~y 240 (242)
T KOG3043|consen 162 NVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFVARRANISSPEDKKAAEEAYQRFISWFKHY 240 (242)
T ss_pred cCCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhhhhccCCCChhHHHHHHHHHHHHHHHHHHh
Confidence 44799999999999999988776665544332 26999999999544 3344 46666777777765
No 116
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=98.28 E-value=0.0001 Score=64.23 Aligned_cols=242 Identities=14% Similarity=0.153 Sum_probs=121.3
Q ss_pred CCCceEEEEcCCCCCCccch-hh-HHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHH----------HHHHHH
Q 022534 33 SRLGTIVFLHGAPSHSYSYR-NV-MSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFH----------EELDKL 100 (295)
Q Consensus 33 ~~~~~vv~lHG~~~~~~~w~-~~-~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~----------~~l~~~ 100 (295)
+.+|..|.|.|-+++....+ .+ +..|.+.|+..+.+--|=||.-..+.... +...+..|+. +.|..+
T Consensus 90 ~~rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~-s~l~~VsDl~~~g~~~i~E~~~Ll~W 168 (348)
T PF09752_consen 90 PYRPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRR-SSLRNVSDLFVMGRATILESRALLHW 168 (348)
T ss_pred CCCceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhc-ccccchhHHHHHHhHHHHHHHHHHHH
Confidence 34678888889888665444 33 56676679999999999998654322211 1122333432 223344
Q ss_pred HHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCC-CCCchhhhh-hhcccchhhhhhhHHHHHHHH
Q 022534 101 LDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTAS-SPLPGLFQQ-LRIPLLGEFTAQNAIMAERFI 177 (295)
Q Consensus 101 ~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 177 (295)
++.-|.. ++-+. |.|+| .+|.+.|...|..|..+-+++ +.... ....+.... ..+..+.+. ..+....+.
T Consensus 169 l~~~G~~-~~g~~--G~SmGG~~A~laa~~~p~pv~~vp~ls-~~sAs~vFt~Gvls~~i~W~~L~~q-~~~~~~~~~-- 241 (348)
T PF09752_consen 169 LEREGYG-PLGLT--GISMGGHMAALAASNWPRPVALVPCLS-WSSASVVFTEGVLSNSINWDALEKQ-FEDTVYEEE-- 241 (348)
T ss_pred HHhcCCC-ceEEE--EechhHhhHHhhhhcCCCceeEEEeec-ccCCCcchhhhhhhcCCCHHHHHHH-hcccchhhh--
Confidence 4444555 44444 77765 567777888998776444553 22221 111221111 001000000 000000000
Q ss_pred HhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHHHHh
Q 022534 178 EAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQK 257 (295)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~ 257 (295)
.+..-... ...............+....+.. ..+....+ .++....-.-.+.++.+++|..+|......+.+
T Consensus 242 ---~~~~~~~~--~~~~~~~~~~~~~~~Ea~~~m~~--~md~~T~l-~nf~~P~dp~~ii~V~A~~DaYVPr~~v~~Lq~ 313 (348)
T PF09752_consen 242 ---ISDIPAQN--KSLPLDSMEERRRDREALRFMRG--VMDSFTHL-TNFPVPVDPSAIIFVAAKNDAYVPRHGVLSLQE 313 (348)
T ss_pred ---hcccccCc--ccccchhhccccchHHHHHHHHH--HHHhhccc-cccCCCCCCCcEEEEEecCceEechhhcchHHH
Confidence 00000000 00000000000000111111111 11111111 122222224568899999999999888889999
Q ss_pred cCCCCeEEEEecCCCCCC-CCCChHHHHHHHHHHHH
Q 022534 258 GNPNVVKLQMIEGAGHMP-QEDWPEKVVDGLRYFFL 292 (295)
Q Consensus 258 ~~~~~~~~~~i~~~gH~~-~~e~p~~~~~~i~~fl~ 292 (295)
.-|. +++..+++ ||.. .+-+.+.|..+|.+-++
T Consensus 314 ~WPG-sEvR~l~g-GHVsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 314 IWPG-SEVRYLPG-GHVSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred hCCC-CeEEEecC-CcEEEeeechHHHHHHHHHHhh
Confidence 8986 89999987 9964 66677888888887654
No 117
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.27 E-value=2.7e-05 Score=63.46 Aligned_cols=93 Identities=16% Similarity=0.187 Sum_probs=61.3
Q ss_pred EEcCCC--CCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEEEEecc
Q 022534 40 FLHGAP--SHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGF 117 (295)
Q Consensus 40 ~lHG~~--~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G~ 117 (295)
++|..+ ++...|..+...|.. .+.|+++|++|+|.++.... +.+.++..+.+.+.......+++++ ||
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~l~~-~~~v~~~~~~g~~~~~~~~~-------~~~~~~~~~~~~l~~~~~~~~~~l~--g~ 71 (212)
T smart00824 2 CFPSTAAPSGPHEYARLAAALRG-RRDVSALPLPGFGPGEPLPA-------SADALVEAQAEAVLRAAGGRPFVLV--GH 71 (212)
T ss_pred ccCCCCCCCcHHHHHHHHHhcCC-CccEEEecCCCCCCCCCCCC-------CHHHHHHHHHHHHHHhcCCCCeEEE--EE
Confidence 344433 566789999999975 69999999999997764321 3456666555544443334467776 67
Q ss_pred cchH-HHHHHHHh---CcCccceeEEEcC
Q 022534 118 LVGS-YGLTWALK---NPSRISKLAILNS 142 (295)
Q Consensus 118 ~~G~-~~~~~a~~---~p~~v~~lil~~~ 142 (295)
|+|+ ++...+.. .++.+.+++++++
T Consensus 72 s~Gg~~a~~~a~~l~~~~~~~~~l~~~~~ 100 (212)
T smart00824 72 SSGGLLAHAVAARLEARGIPPAAVVLLDT 100 (212)
T ss_pred CHHHHHHHHHHHHHHhCCCCCcEEEEEcc
Confidence 7664 45455443 5667888988764
No 118
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.27 E-value=3.8e-06 Score=76.59 Aligned_cols=95 Identities=12% Similarity=0.289 Sum_probs=65.4
Q ss_pred CCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEEEEecccchH-HHH
Q 022534 46 SHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGS-YGL 124 (295)
Q Consensus 46 ~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G~-~~~ 124 (295)
.....|..+++.|.+.||.+ ..|++|+|.+.++... .+...+++.+.|.++.++.+.+ +++|+ |||+|+ ++.
T Consensus 105 ~~~~~~~~li~~L~~~GY~~-~~dL~g~gYDwR~~~~---~~~~~~~Lk~lIe~~~~~~g~~-kV~LV--GHSMGGlva~ 177 (440)
T PLN02733 105 DEVYYFHDMIEQLIKWGYKE-GKTLFGFGYDFRQSNR---LPETMDGLKKKLETVYKASGGK-KVNII--SHSMGGLLVK 177 (440)
T ss_pred chHHHHHHHHHHHHHcCCcc-CCCcccCCCCcccccc---HHHHHHHHHHHHHHHHHHcCCC-CEEEE--EECHhHHHHH
Confidence 45678999999999888765 8999999999875311 1112344455555555555544 57777 778776 466
Q ss_pred HHHHhCcCc----cceeEEEcCCCCCC
Q 022534 125 TWALKNPSR----ISKLAILNSPLTAS 147 (295)
Q Consensus 125 ~~a~~~p~~----v~~lil~~~p~~~~ 147 (295)
.++..+|+. |+++|.+++|....
T Consensus 178 ~fl~~~p~~~~k~I~~~I~la~P~~Gs 204 (440)
T PLN02733 178 CFMSLHSDVFEKYVNSWIAIAAPFQGA 204 (440)
T ss_pred HHHHHCCHhHHhHhccEEEECCCCCCC
Confidence 677777764 78888998887654
No 119
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.24 E-value=1.4e-05 Score=66.41 Aligned_cols=37 Identities=27% Similarity=0.502 Sum_probs=34.4
Q ss_pred ceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCC
Q 022534 36 GTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLG 72 (295)
Q Consensus 36 ~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G 72 (295)
|+|+|+||+.-....|..++.+++..||-|+||++-.
T Consensus 47 PVilF~HG~~l~ns~Ys~lL~HIASHGfIVVAPQl~~ 83 (307)
T PF07224_consen 47 PVILFLHGFNLYNSFYSQLLAHIASHGFIVVAPQLYT 83 (307)
T ss_pred cEEEEeechhhhhHHHHHHHHHHhhcCeEEEechhhc
Confidence 6899999999999999999999999999999999974
No 120
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=98.22 E-value=0.0005 Score=60.51 Aligned_cols=60 Identities=22% Similarity=0.125 Sum_probs=42.8
Q ss_pred CcEEEEEeCCCCCCCcc--hHHHHHhcCCCCeEEEEecCCCCCCCCC-----ChHHHHHHHHHHHHhc
Q 022534 234 KPVLVAWGISDKYLPQS--VAEEFQKGNPNVVKLQMIEGAGHMPQED-----WPEKVVDGLRYFFLNY 294 (295)
Q Consensus 234 ~P~l~i~G~~D~~~~~~--~~~~~~~~~~~~~~~~~i~~~gH~~~~e-----~p~~~~~~i~~fl~~~ 294 (295)
.|+|++.++.|.+.+.. .++++++.-- ..++..++++.|..++- ...++.+.|..|+..+
T Consensus 269 p~tlv~~ag~D~L~D~~~~Y~~~Lkk~Gv-~v~~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 269 PPTLVVVAGYDVLRDEGLAYAEKLKKAGV-EVTLIHYEDGFHGFHILDPSSKEAHALMDAIVEFIKSN 335 (336)
T ss_pred CceEEEEeCchhhhhhhHHHHHHHHHcCC-eEEEEEECCCeeEEEecCCchhhHHHHHHHHHHHHhhc
Confidence 35999999999887533 4566655433 35778999999965443 4457888888888753
No 121
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.17 E-value=0.0001 Score=62.44 Aligned_cols=205 Identities=18% Similarity=0.228 Sum_probs=106.7
Q ss_pred CceEEEEcCCCCCCccchhhHHHhh-hCC--CeEEEe--CCCC------CCCC--CCCC---CCCCCCCCCHHHHHHHHH
Q 022534 35 LGTIVFLHGAPSHSYSYRNVMSQMS-DAG--FHCFAP--DWLG------FGFS--DKPE---KGYDDFDFTENEFHEELD 98 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~~w~~~~~~l~-~~~--~~via~--Dl~G------~G~S--~~~~---~~~~~~~~~~~~~~~~l~ 98 (295)
..|.||+||++++..++..++..+. +.+ -.++.. +-=| .=.. ..|- ...++.+-+....+..+.
T Consensus 11 ~tPTifihG~~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~wl~ 90 (255)
T PF06028_consen 11 TTPTIFIHGYGGTANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKWLK 90 (255)
T ss_dssp -EEEEEE--TTGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHHHH
T ss_pred CCcEEEECCCCCChhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHHHH
Confidence 3589999999999999999999996 433 223222 2222 1111 1110 001122224566777888
Q ss_pred HHHHHh----CCCCceEEEEecccchHHHH-HHHHhCcC-----ccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhh
Q 022534 99 KLLDVL----EVKYPFFLVVQGFLVGSYGL-TWALKNPS-----RISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQ 168 (295)
Q Consensus 99 ~~~~~l----~~~~~~~lv~~G~~~G~~~~-~~a~~~p~-----~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (295)
.++..| ++++ +-+| |||+|++++ .++..+-. ++.++|.+++|+.............
T Consensus 91 ~vl~~L~~~Y~~~~-~N~V--GHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~~~~~~----------- 156 (255)
T PF06028_consen 91 KVLKYLKKKYHFKK-FNLV--GHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMNDDQNQN----------- 156 (255)
T ss_dssp HHHHHHHHCC--SE-EEEE--EETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC-TTTT-----------
T ss_pred HHHHHHHHhcCCCE-EeEE--EECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccccchhh-----------
Confidence 777776 4554 5666 778887654 34444211 5899999988876532111000000
Q ss_pred hHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhh-hHhhhcCcCCCCCCCcEEEEEeC-----
Q 022534 169 NAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDI-SSRIGAGFSSGSWDKPVLVAWGI----- 242 (295)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~P~l~i~G~----- 242 (295)
.....+ |... ...+..+. .. ...+ .-++.+|-|.|+
T Consensus 157 ------~~~~~g-p~~~-------------------~~~y~~l~-----~~~~~~~-------p~~i~VLnI~G~~~~g~ 198 (255)
T PF06028_consen 157 ------DLNKNG-PKSM-------------------TPMYQDLL-----KNRRKNF-------PKNIQVLNIYGDLEDGS 198 (255)
T ss_dssp -------CSTT--BSS---------------------HHHHHHH-----HTHGGGS-------TTT-EEEEEEEESBTTC
T ss_pred ------hhcccC-Cccc-------------------CHHHHHHH-----HHHHhhC-------CCCeEEEEEecccCCCC
Confidence 000000 1000 01111110 11 1111 226889999999
Q ss_pred -CCCCCCcchHHHHHhcCCC---CeEEEEecC--CCCCCCCCChHHHHHHHHHHHH
Q 022534 243 -SDKYLPQSVAEEFQKGNPN---VVKLQMIEG--AGHMPQEDWPEKVVDGLRYFFL 292 (295)
Q Consensus 243 -~D~~~~~~~~~~~~~~~~~---~~~~~~i~~--~gH~~~~e~p~~~~~~i~~fl~ 292 (295)
.|..+|...+..+...+.+ .-+-.++.| +.|.-.-|+| ++.+.|..||-
T Consensus 199 ~sDG~V~~~Ss~sl~~L~~~~~~~Y~e~~v~G~~a~HS~LheN~-~V~~~I~~FLw 253 (255)
T PF06028_consen 199 NSDGIVPNASSLSLRYLLKNRAKSYQEKTVTGKDAQHSQLHENP-QVDKLIIQFLW 253 (255)
T ss_dssp SBTSSSBHHHHCTHHHHCTTTSSEEEEEEEESGGGSCCGGGCCH-HHHHHHHHHHC
T ss_pred CCCeEEeHHHHHHHHHHhhcccCceEEEEEECCCCccccCCCCH-HHHHHHHHHhc
Confidence 7889988877766666543 235566654 6898766777 46688999873
No 122
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=98.15 E-value=4.2e-06 Score=69.24 Aligned_cols=49 Identities=16% Similarity=0.167 Sum_probs=31.8
Q ss_pred CCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCCh
Q 022534 231 SWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWP 280 (295)
Q Consensus 231 ~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p 280 (295)
++++|+|-|+|++|++++++.+..+.+.+.++.+++..+ .||.++...+
T Consensus 159 ~i~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~~~v~~h~-gGH~vP~~~~ 207 (212)
T PF03959_consen 159 KISIPTLHVIGENDPVVPPERSEALAEMFDPDARVIEHD-GGHHVPRKKE 207 (212)
T ss_dssp T---EEEEEEETT-SSS-HHHHHHHHHHHHHHEEEEEES-SSSS----HH
T ss_pred cCCCCeEEEEeCCCCCcchHHHHHHHHhccCCcEEEEEC-CCCcCcCChh
Confidence 568999999999999999888888888776435777776 5887765543
No 123
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=98.11 E-value=0.00014 Score=66.37 Aligned_cols=61 Identities=25% Similarity=0.279 Sum_probs=45.7
Q ss_pred CCcEEEEEeCCCCCCCcchHHHHHhcCC-------------------------CCeEEEEecCCCCCCCCCChHHHHHHH
Q 022534 233 DKPVLVAWGISDKYLPQSVAEEFQKGNP-------------------------NVVKLQMIEGAGHMPQEDWPEKVVDGL 287 (295)
Q Consensus 233 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~-------------------------~~~~~~~i~~~gH~~~~e~p~~~~~~i 287 (295)
++++|+..|+.|.+++...++...+.+. .+.+++.|.+|||+++.++|++..+.+
T Consensus 330 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~~k~~~~ltf~~V~~AGHmvP~dqP~~a~~m~ 409 (415)
T PF00450_consen 330 GIRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRKVNGQVAGYVKQYGNLTFVTVRGAGHMVPQDQPEAALQMF 409 (415)
T ss_dssp T-EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEETTCSEEEEEEEETTEEEEEETT--SSHHHHSHHHHHHHH
T ss_pred cceeEEeccCCCEEEEeccchhhhhccccCcccccccccccccccccceeEEeccEEEEEEcCCcccChhhCHHHHHHHH
Confidence 4999999999999998777666554432 124688999999999999999999999
Q ss_pred HHHHHh
Q 022534 288 RYFFLN 293 (295)
Q Consensus 288 ~~fl~~ 293 (295)
+.||.+
T Consensus 410 ~~fl~g 415 (415)
T PF00450_consen 410 RRFLKG 415 (415)
T ss_dssp HHHHCT
T ss_pred HHHhcC
Confidence 999864
No 124
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.10 E-value=5.5e-06 Score=68.38 Aligned_cols=98 Identities=14% Similarity=0.208 Sum_probs=49.8
Q ss_pred ceEEEEcCCCC-CCccchhhHHHhhhCCCe---EEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceE
Q 022534 36 GTIVFLHGAPS-HSYSYRNVMSQMSDAGFH---CFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFF 111 (295)
Q Consensus 36 ~~vv~lHG~~~-~~~~w~~~~~~l~~~~~~---via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~ 111 (295)
.||||+||.++ ....|..+++.|+++||. |+++++-....+.........-+ +..++.+.|+.+++.-+- + +-
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~-~~~~l~~fI~~Vl~~TGa-k-VD 78 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCE-SAKQLRAFIDAVLAYTGA-K-VD 78 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HH-HHHHHHHHHHHHHHHHT----EE
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchh-hHHHHHHHHHHHHHhhCC-E-EE
Confidence 38999999998 667899999999999999 89999844333221110000000 012334444444444465 4 77
Q ss_pred EEEecccchHHHHHHHHhCcCccceeE
Q 022534 112 LVVQGFLVGSYGLTWALKNPSRISKLA 138 (295)
Q Consensus 112 lv~~G~~~G~~~~~~a~~~p~~v~~li 138 (295)
+| |||+|+.-..+++++-.-++...
T Consensus 79 IV--gHS~G~~iaR~yi~~~~~~d~~~ 103 (219)
T PF01674_consen 79 IV--GHSMGGTIARYYIKGGGGADKVV 103 (219)
T ss_dssp EE--EETCHHHHHHHHHHHCTGGGTEE
T ss_pred EE--EcCCcCHHHHHHHHHcCCCCccc
Confidence 77 77888654555555433333333
No 125
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=98.08 E-value=0.00022 Score=61.27 Aligned_cols=93 Identities=17% Similarity=0.297 Sum_probs=48.9
Q ss_pred CceEEEEcCCCCCCc---cchhhHHHhhhCCCeEEEeCCC----CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC--
Q 022534 35 LGTIVFLHGAPSHSY---SYRNVMSQMSDAGFHCFAPDWL----GFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLE-- 105 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~---~w~~~~~~l~~~~~~via~Dl~----G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~-- 105 (295)
+..||||-|.+..-. ....+++.|.+.++.|+-+-+. |+|-++ +++=+++|.++++.+-
T Consensus 33 ~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~S------------L~~D~~eI~~~v~ylr~~ 100 (303)
T PF08538_consen 33 PNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTSS------------LDRDVEEIAQLVEYLRSE 100 (303)
T ss_dssp SSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S--------------HHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcch------------hhhHHHHHHHHHHHHHHh
Confidence 348999999876332 3446777787668999988664 444333 3333455555555331
Q ss_pred -----CCCceEEEEecccchH-HHHHHHHh-C----cCccceeEEEc
Q 022534 106 -----VKYPFFLVVQGFLVGS-YGLTWALK-N----PSRISKLAILN 141 (295)
Q Consensus 106 -----~~~~~~lv~~G~~~G~-~~~~~a~~-~----p~~v~~lil~~ 141 (295)
-.++++|+ |||.|+ -.+.|..+ . ...|++.|+-+
T Consensus 101 ~~g~~~~~kIVLm--GHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQA 145 (303)
T PF08538_consen 101 KGGHFGREKIVLM--GHSTGCQDVLHYLSSPNPSPSRPPVDGAILQA 145 (303)
T ss_dssp S------S-EEEE--EECCHHHHHHHHHHH-TT---CCCEEEEEEEE
T ss_pred hccccCCccEEEE--ecCCCcHHHHHHHhccCccccccceEEEEEeC
Confidence 12346676 788887 24455443 2 25799888764
No 126
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=98.03 E-value=0.0015 Score=57.33 Aligned_cols=100 Identities=18% Similarity=0.145 Sum_probs=55.9
Q ss_pred CceEEEEcCCC---CCCccc-hhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---hCCC
Q 022534 35 LGTIVFLHGAP---SHSYSY-RNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDV---LEVK 107 (295)
Q Consensus 35 ~~~vv~lHG~~---~~~~~w-~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~---l~~~ 107 (295)
.|+||++||++ ++.... ..+...+...|+.|+.+|.|---+.. +...+++..+.+..+.+. ++.+
T Consensus 79 ~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~~--------~p~~~~d~~~a~~~l~~~~~~~g~d 150 (312)
T COG0657 79 APVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEHP--------FPAALEDAYAAYRWLRANAAELGID 150 (312)
T ss_pred CcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCCC--------CCchHHHHHHHHHHHHhhhHhhCCC
Confidence 58999999975 344444 45555556679999999999433321 122345544444444443 3443
Q ss_pred -CceEEEEecccc-hHHHHHHHHhCcC----ccceeEEEcCCCC
Q 022534 108 -YPFFLVVQGFLV-GSYGLTWALKNPS----RISKLAILNSPLT 145 (295)
Q Consensus 108 -~~~~lv~~G~~~-G~~~~~~a~~~p~----~v~~lil~~~p~~ 145 (295)
+.+.+. |+|. |.+++.++..-.+ .....+++ +|..
T Consensus 151 p~~i~v~--GdSAGG~La~~~a~~~~~~~~~~p~~~~li-~P~~ 191 (312)
T COG0657 151 PSRIAVA--GDSAGGHLALALALAARDRGLPLPAAQVLI-SPLL 191 (312)
T ss_pred ccceEEE--ecCcccHHHHHHHHHHHhcCCCCceEEEEE-eccc
Confidence 224443 6664 5666655542211 34566666 4553
No 127
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=98.02 E-value=3.3e-05 Score=66.43 Aligned_cols=119 Identities=9% Similarity=0.002 Sum_probs=64.7
Q ss_pred CcEEEEEEEcCC---CCCCCceEEEEcCCCCCC-ccchh---------hHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCC
Q 022534 19 GEYRWFVRETGS---ADSRLGTIVFLHGAPSHS-YSYRN---------VMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDD 85 (295)
Q Consensus 19 ~~~~~~~~~~g~---~~~~~~~vv~lHG~~~~~-~~w~~---------~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~ 85 (295)
+|+++....+.+ .+.+.|+||..|+++.+. ..+.. ....|+++||-|+..|.||.|.|+......
T Consensus 1 DGv~L~adv~~P~~~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~-- 78 (272)
T PF02129_consen 1 DGVRLAADVYRPGADGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPM-- 78 (272)
T ss_dssp TS-EEEEEEEEE--TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TT--
T ss_pred CCCEEEEEEEecCCCCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccC--
Confidence 456666655544 334468899999998543 22221 112277789999999999999999743220
Q ss_pred CCCCHHHHHHHHHHHHHHh---CCC-CceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCC
Q 022534 86 FDFTENEFHEELDKLLDVL---EVK-YPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLT 145 (295)
Q Consensus 86 ~~~~~~~~~~~l~~~~~~l---~~~-~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~ 145 (295)
. ..-.+|..++|+-+ ... ..+-+. |.|-+ ...+..|+..|..+++++...+...
T Consensus 79 ---~-~~e~~D~~d~I~W~~~Qpws~G~VGm~--G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d 137 (272)
T PF02129_consen 79 ---S-PNEAQDGYDTIEWIAAQPWSNGKVGMY--GISYGGFTQWAAAARRPPHLKAIVPQSGWSD 137 (272)
T ss_dssp ---S-HHHHHHHHHHHHHHHHCTTEEEEEEEE--EETHHHHHHHHHHTTT-TTEEEEEEESE-SB
T ss_pred ---C-hhHHHHHHHHHHHHHhCCCCCCeEEee--ccCHHHHHHHHHHhcCCCCceEEEecccCCc
Confidence 1 23344444444443 322 234343 44433 3344556668889999887655443
No 128
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=97.97 E-value=2.6e-05 Score=56.63 Aligned_cols=60 Identities=25% Similarity=0.339 Sum_probs=53.0
Q ss_pred CCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 233 DKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 233 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
..|+|+|.++.|+++|.+.+..+++.+++ .+++.+++.||......-.-+.+++.+||.+
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~~-s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~ 93 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLPG-SRLVTVDGAGHGVYAGGSPCVDKAVDDYLLD 93 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCCC-ceEEEEeccCcceecCCChHHHHHHHHHHHc
Confidence 59999999999999999999999999997 6999999999998764445677888899865
No 129
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=97.93 E-value=5.7e-05 Score=66.08 Aligned_cols=40 Identities=28% Similarity=0.378 Sum_probs=37.3
Q ss_pred CCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCC
Q 022534 34 RLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGF 73 (295)
Q Consensus 34 ~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~ 73 (295)
..|.||+-||.++....+..+++.|++.||-|.++|+||-
T Consensus 70 ~~PlvvlshG~Gs~~~~f~~~A~~lAs~Gf~Va~~~hpgs 109 (365)
T COG4188 70 LLPLVVLSHGSGSYVTGFAWLAEHLASYGFVVAAPDHPGS 109 (365)
T ss_pred cCCeEEecCCCCCCccchhhhHHHHhhCceEEEeccCCCc
Confidence 4689999999999999999999999999999999999983
No 130
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.93 E-value=0.00011 Score=62.21 Aligned_cols=100 Identities=13% Similarity=0.281 Sum_probs=78.6
Q ss_pred ceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEEEEe
Q 022534 36 GTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQ 115 (295)
Q Consensus 36 ~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~ 115 (295)
|||.++|+.+++...|..+...|.. ...|+..+-||+|.-..+. -+++++++...+-|.+..-+.|++|+
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~-~~~v~~l~a~g~~~~~~~~-------~~l~~~a~~yv~~Ir~~QP~GPy~L~-- 70 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGP-LLPVYGLQAPGYGAGEQPF-------ASLDDMAAAYVAAIRRVQPEGPYVLL-- 70 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhcc-CceeeccccCccccccccc-------CCHHHHHHHHHHHHHHhCCCCCEEEE--
Confidence 4899999999999999999999986 5899999999999644322 26788888888888887767788887
Q ss_pred cccch-HHHHHHHHh---CcCccceeEEEcCCCC
Q 022534 116 GFLVG-SYGLTWALK---NPSRISKLAILNSPLT 145 (295)
Q Consensus 116 G~~~G-~~~~~~a~~---~p~~v~~lil~~~p~~ 145 (295)
|||.| .++..+|.+ .-+.|..|++++++..
T Consensus 71 G~S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 71 GWSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred eeccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 88754 567666642 2347999999987655
No 131
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=97.92 E-value=0.0017 Score=50.92 Aligned_cols=59 Identities=24% Similarity=0.323 Sum_probs=45.1
Q ss_pred CCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCC----CChHHHHHHHHHHHH
Q 022534 231 SWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQE----DWPEKVVDGLRYFFL 292 (295)
Q Consensus 231 ~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~----e~p~~~~~~i~~fl~ 292 (295)
..--|.+++..++|++++++.++.+++..+ ..++.+.++||.--. +.|+ ....+..|+.
T Consensus 115 ~lpfps~vvaSrnDp~~~~~~a~~~a~~wg--s~lv~~g~~GHiN~~sG~g~wpe-g~~~l~~~~s 177 (181)
T COG3545 115 PLPFPSVVVASRNDPYVSYEHAEDLANAWG--SALVDVGEGGHINAESGFGPWPE-GYALLAQLLS 177 (181)
T ss_pred cCCCceeEEEecCCCCCCHHHHHHHHHhcc--HhheecccccccchhhcCCCcHH-HHHHHHHHhh
Confidence 345789999999999999999999999887 379999999996533 3454 3455555544
No 132
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=97.85 E-value=0.00071 Score=58.74 Aligned_cols=53 Identities=21% Similarity=0.332 Sum_probs=39.4
Q ss_pred CCCCcEEEEEeCCCCCCCcchHHHHHhc-C--C-CCeEEEEecCCCCCCCC--CChHHH
Q 022534 231 SWDKPVLVAWGISDKYLPQSVAEEFQKG-N--P-NVVKLQMIEGAGHMPQE--DWPEKV 283 (295)
Q Consensus 231 ~~~~P~l~i~G~~D~~~~~~~~~~~~~~-~--~-~~~~~~~i~~~gH~~~~--e~p~~~ 283 (295)
..++|+++.+|..|.++|+..+..+.+. + . .+++++.++..+|.... ..|+.+
T Consensus 217 ~P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~~~~~~~~a~ 275 (290)
T PF03583_consen 217 TPTVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGAAFASAPDAL 275 (290)
T ss_pred CCCCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhhhhcCcHHHH
Confidence 5689999999999999998887776532 2 2 24788999999997532 344443
No 133
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=97.82 E-value=0.00016 Score=57.93 Aligned_cols=60 Identities=12% Similarity=0.005 Sum_probs=42.4
Q ss_pred CCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCCh----HHHHHHHHHHH
Q 022534 231 SWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWP----EKVVDGLRYFF 291 (295)
Q Consensus 231 ~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p----~~~~~~i~~fl 291 (295)
..++|+|++.|++|.-.-.+..+.|..+..+ +++..++|.+|.-.+|.. -.+...+++|+
T Consensus 205 ~v~~~ilVv~~~~espklieQnrdf~~q~~~-a~~~~f~n~~hy~I~~~~~~~~s~~~~~~~~~~ 268 (270)
T KOG4627|consen 205 DVTVWILVVAAEHESPKLIEQNRDFADQLRK-ASFTLFKNYDHYDIIEETAIDDSDVSRFLRNIE 268 (270)
T ss_pred CceeeeeEeeecccCcHHHHhhhhHHHHhhh-cceeecCCcchhhHHHHhccccchHHHHHHHHh
Confidence 4579999999999964445555667777766 699999999998655543 23444455543
No 134
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=97.78 E-value=0.0019 Score=60.16 Aligned_cols=235 Identities=15% Similarity=0.155 Sum_probs=132.9
Q ss_pred ccceeeEEeCcEEEEEEEcCC----CCCCCceEEEEcCCCC-----CCccchhhH--HHhhhCCCeEEEeCCCCCCCCCC
Q 022534 10 REYGSYIKSGEYRWFVRETGS----ADSRLGTIVFLHGAPS-----HSYSYRNVM--SQMSDAGFHCFAPDWLGFGFSDK 78 (295)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~g~----~~~~~~~vv~lHG~~~-----~~~~w~~~~--~~l~~~~~~via~Dl~G~G~S~~ 78 (295)
|||=.|-.-.|.+++.-.+.+ +..+-|+++++=|+++ +++.|...+ ..|+..||-|+.+|=||--.-..
T Consensus 613 ~eif~fqs~tg~~lYgmiyKPhn~~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGl 692 (867)
T KOG2281|consen 613 PEIFSFQSKTGLTLYGMIYKPHNFQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGL 692 (867)
T ss_pred hhheeeecCCCcEEEEEEEccccCCCCCCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccch
Confidence 456566664455555444432 1123589999999986 666665444 45888899999999998654432
Q ss_pred CCCCC--CCC-CCCHHHHHHHHHHHHHHhCCCCceEEEEecccchH-HHHHHHHhCcCccceeEEEcCCCCCCCCCchhh
Q 022534 79 PEKGY--DDF-DFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNSPLTASSPLPGLF 154 (295)
Q Consensus 79 ~~~~~--~~~-~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~ 154 (295)
+-..+ ... .--++|+++-+.-+.++.|.-+.-.+..||||-|+ ++++..++||+-++ +.+.++|... |. .
T Consensus 693 kFE~~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~Ifr-vAIAGapVT~---W~-~- 766 (867)
T KOG2281|consen 693 KFESHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFR-VAIAGAPVTD---WR-L- 766 (867)
T ss_pred hhHHHHhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcceee-EEeccCccee---ee-e-
Confidence 11000 000 11347888888888888764333334558998554 57777789998654 6666665532 11 0
Q ss_pred hhhhcccchhhhhhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCC
Q 022534 155 QQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDK 234 (295)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (295)
+ +....+|+++ .|... ... |.. | .... ...++. .-..
T Consensus 767 ----------Y---DTgYTERYMg--~P~~n----E~g----Y~a----g-SV~~---------~Veklp------depn 803 (867)
T KOG2281|consen 767 ----------Y---DTGYTERYMG--YPDNN----EHG----YGA----G-SVAG---------HVEKLP------DEPN 803 (867)
T ss_pred ----------e---cccchhhhcC--CCccc----hhc----ccc----h-hHHH---------HHhhCC------CCCc
Confidence 0 0011233322 12110 000 100 0 0100 111111 1134
Q ss_pred cEEEEEeCCCCCCCcchHHHHHhcC---CCCeEEEEecCCCCCCC-CCChHHHHHHHHHHHHh
Q 022534 235 PVLVAWGISDKYLPQSVAEEFQKGN---PNVVKLQMIEGAGHMPQ-EDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 235 P~l~i~G~~D~~~~~~~~~~~~~~~---~~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~ 293 (295)
-.|++||--|.-+.......+...+ .+.-+++++|+-+|++- .|.-.-.-..+..|+.+
T Consensus 804 RLlLvHGliDENVHF~Hts~Lvs~lvkagKpyeL~IfP~ERHsiR~~es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 804 RLLLVHGLIDENVHFAHTSRLVSALVKAGKPYELQIFPNERHSIRNPESGIYYEARLLHFLQE 866 (867)
T ss_pred eEEEEecccccchhhhhHHHHHHHHHhCCCceEEEEccccccccCCCccchhHHHHHHHHHhh
Confidence 5799999999988777665554322 22359999999999984 45555566667777764
No 135
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=97.77 E-value=0.00012 Score=64.50 Aligned_cols=108 Identities=23% Similarity=0.330 Sum_probs=51.4
Q ss_pred CCCceEEEEcCCCCCCcc--------------c----hhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHH
Q 022534 33 SRLGTIVFLHGAPSHSYS--------------Y----RNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFH 94 (295)
Q Consensus 33 ~~~~~vv~lHG~~~~~~~--------------w----~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~ 94 (295)
.+-|.||++||-+++... | ..+..+|+++||-|+++|.+|+|+............++-..++
T Consensus 113 ~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la 192 (390)
T PF12715_consen 113 GPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALA 192 (390)
T ss_dssp S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHH
T ss_pred CCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEEEEccccccccccccccccccchhHHHHH
Confidence 345789999997653311 1 2457789999999999999999987654322112222222222
Q ss_pred HHH------------------HHHHHHhCCCCceEEEEecccchHH-HHHHHHhCcCccceeEEEc
Q 022534 95 EEL------------------DKLLDVLEVKYPFFLVVQGFLVGSY-GLTWALKNPSRISKLAILN 141 (295)
Q Consensus 95 ~~l------------------~~~~~~l~~~~~~~lv~~G~~~G~~-~~~~a~~~p~~v~~lil~~ 141 (295)
..+ .++++.+..-.+--+.+.|+|||++ ++.+|+.. ++|+..++.+
T Consensus 193 ~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALD-dRIka~v~~~ 257 (390)
T PF12715_consen 193 RNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALD-DRIKATVANG 257 (390)
T ss_dssp HHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH--TT--EEEEES
T ss_pred HHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcc-hhhHhHhhhh
Confidence 211 1222222211111233348898875 55666665 4788776653
No 136
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.77 E-value=0.00041 Score=58.84 Aligned_cols=130 Identities=16% Similarity=0.147 Sum_probs=73.9
Q ss_pred ccceeeEEeCcEEEEEEEcCCCC--CCCceEEEEcCCCCCCc------cchhhHHHhhhCCCeEEEeCCCCCCC------
Q 022534 10 REYGSYIKSGEYRWFVRETGSAD--SRLGTIVFLHGAPSHSY------SYRNVMSQMSDAGFHCFAPDWLGFGF------ 75 (295)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~g~~~--~~~~~vv~lHG~~~~~~------~w~~~~~~l~~~~~~via~Dl~G~G~------ 75 (295)
..+-..+.++|.+..|.-+-++. ..+|.||+|||-.++.. -|+.+++ ..||-|..||.-..-.
T Consensus 34 ~~~~~s~~~~g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag~~~~sg~d~lAd---~~gFlV~yPdg~~~~wn~~~~~ 110 (312)
T COG3509 34 GSSVASFDVNGLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAGQLHGTGWDALAD---REGFLVAYPDGYDRAWNANGCG 110 (312)
T ss_pred cCCccccccCCCccceEEEcCCCCCCCCCEEEEEecCCCChHHhhcccchhhhhc---ccCcEEECcCccccccCCCccc
Confidence 34444556666555555543322 22468999999876543 4555544 3489999996432221
Q ss_pred -CCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCC
Q 022534 76 -SDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPL 144 (295)
Q Consensus 76 -S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~ 144 (295)
+-.+.....+.+ ....+.+.++.++.+.+++.. .+.+.|.|.| .++..++..+|+.+.++.++++..
T Consensus 111 ~~~~p~~~~~g~d-dVgflr~lva~l~~~~gidp~-RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 111 NWFGPADRRRGVD-DVGFLRALVAKLVNEYGIDPA-RVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred ccCCcccccCCcc-HHHHHHHHHHHHHHhcCcCcc-eEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 111111000111 123345555666666677632 2333477765 578888999999999998886544
No 137
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=97.75 E-value=0.0014 Score=52.92 Aligned_cols=180 Identities=21% Similarity=0.283 Sum_probs=99.9
Q ss_pred ceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCC-----------CCCCCCC--CCCCCHHHHHHHHHHHHH
Q 022534 36 GTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSD-----------KPEKGYD--DFDFTENEFHEELDKLLD 102 (295)
Q Consensus 36 ~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~-----------~~~~~~~--~~~~~~~~~~~~l~~~~~ 102 (295)
.+||++||.+++...|..+++.|.-.+-+.|.|--|=.=-|. ...-..+ ...-.+..-++.+..+++
T Consensus 4 atIi~LHglGDsg~~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~Li~ 83 (206)
T KOG2112|consen 4 ATIIFLHGLGDSGSGWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANLID 83 (206)
T ss_pred EEEEEEecCCCCCccHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHHHH
Confidence 489999999999999988888877556777777443211111 0000000 000022334566666666
Q ss_pred Hh---CCCCceEEEEecccch-HHHHHHHHhCcCccceeEEEcCCCCCCCCCchhhhhhhcccchhhhhhhHHHHHHHHH
Q 022534 103 VL---EVKYPFFLVVQGFLVG-SYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIE 178 (295)
Q Consensus 103 ~l---~~~~~~~lv~~G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (295)
.- +++..-+++ +|.+.| +.++..+..+|..+.+..-.+ +... +..
T Consensus 84 ~e~~~Gi~~~rI~i-gGfs~G~a~aL~~~~~~~~~l~G~~~~s-~~~p---------~~~-------------------- 132 (206)
T KOG2112|consen 84 NEPANGIPSNRIGI-GGFSQGGALALYSALTYPKALGGIFALS-GFLP---------RAS-------------------- 132 (206)
T ss_pred HHHHcCCCccceeE-cccCchHHHHHHHHhccccccceeeccc-cccc---------cch--------------------
Confidence 42 443222333 356655 567777778877666554332 1110 000
Q ss_pred hCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcEEEEEeCCCCCCCcchHHH---H
Q 022534 179 AGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEE---F 255 (295)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~---~ 255 (295)
...+. .+ .. .. ..|++..||+.|+++|....+. +
T Consensus 133 ~~~~~-----------~~--------------------~~-----------~~-~~~i~~~Hg~~d~~vp~~~g~~s~~~ 169 (206)
T KOG2112|consen 133 IGLPG-----------WL--------------------PG-----------VN-YTPILLCHGTADPLVPFRFGEKSAQF 169 (206)
T ss_pred hhccC-----------Cc--------------------cc-----------cC-cchhheecccCCceeehHHHHHHHHH
Confidence 00000 00 00 01 4889999999999998765433 3
Q ss_pred HhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 256 QKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 256 ~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
.+.....++++.+++.+|.. -|+++ +.+..|+.+
T Consensus 170 l~~~~~~~~f~~y~g~~h~~---~~~e~-~~~~~~~~~ 203 (206)
T KOG2112|consen 170 LKSLGVRVTFKPYPGLGHST---SPQEL-DDLKSWIKT 203 (206)
T ss_pred HHHcCCceeeeecCCccccc---cHHHH-HHHHHHHHH
Confidence 33333348999999999985 34444 556666654
No 138
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=97.70 E-value=0.00014 Score=60.17 Aligned_cols=45 Identities=31% Similarity=0.464 Sum_probs=25.5
Q ss_pred CCCCcEEEEEeCCCCCCCcch-HHH----HHhc-CCCCeEEEEecCCCCCC
Q 022534 231 SWDKPVLVAWGISDKYLPQSV-AEE----FQKG-NPNVVKLQMIEGAGHMP 275 (295)
Q Consensus 231 ~~~~P~l~i~G~~D~~~~~~~-~~~----~~~~-~~~~~~~~~i~~~gH~~ 275 (295)
++++|+|+|.|++|...|... ++. +.+. .+...+++.+|++||+.
T Consensus 113 ~i~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~~~~~~~l~Y~~aGH~i 163 (213)
T PF08840_consen 113 KIKGPILLISGEDDQIWPSSEMAEQIEERLKAAGFPHNVEHLSYPGAGHLI 163 (213)
T ss_dssp G--SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT-----EEEEETTB-S--
T ss_pred HcCCCEEEEEeCCCCccchHHHHHHHHHHHHHhCCCCcceEEEcCCCCcee
Confidence 678999999999999987543 333 3322 23246889999999974
No 139
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=97.62 E-value=0.00014 Score=61.06 Aligned_cols=104 Identities=18% Similarity=0.200 Sum_probs=54.7
Q ss_pred CceEEEEcCCCCCCccchhhHHHhh-hCCC--eEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceE
Q 022534 35 LGTIVFLHGAPSHSYSYRNVMSQMS-DAGF--HCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFF 111 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~~w~~~~~~l~-~~~~--~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~ 111 (295)
+..+||+||+..+...-..-+..+. ..+| .++.++||..|.-..-..+.....++-+.+++.|..+.+..+.+ .++
T Consensus 18 ~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~~-~I~ 96 (233)
T PF05990_consen 18 KEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGIK-RIH 96 (233)
T ss_pred CeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCCc-eEE
Confidence 5699999999877554332233332 1233 79999999888632211011111222233333343333333334 467
Q ss_pred EEEecccchHHHHHHHH-----hCc-----CccceeEEEc
Q 022534 112 LVVQGFLVGSYGLTWAL-----KNP-----SRISKLAILN 141 (295)
Q Consensus 112 lv~~G~~~G~~~~~~a~-----~~p-----~~v~~lil~~ 141 (295)
++ +||||+..+.-|+ ..+ .++..+++++
T Consensus 97 il--aHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~A 134 (233)
T PF05990_consen 97 IL--AHSMGNRVLLEALRQLASEGERPDVKARFDNVILAA 134 (233)
T ss_pred EE--EeCchHHHHHHHHHHHHhcccchhhHhhhheEEEEC
Confidence 77 6789875433222 222 3677787774
No 140
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=97.49 E-value=0.00017 Score=59.85 Aligned_cols=88 Identities=19% Similarity=0.292 Sum_probs=44.6
Q ss_pred eEEEEcCCCCCCccchhhHHHhhh--CCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC-CceEEE
Q 022534 37 TIVFLHGAPSHSYSYRNVMSQMSD--AGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVK-YPFFLV 113 (295)
Q Consensus 37 ~vv~lHG~~~~~~~w~~~~~~l~~--~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~-~~~~lv 113 (295)
.|||+||+.++...|..+.+.|.. .++.--.+...++-..... ..++.+...+.+++.|.+.++....+ .++.+|
T Consensus 6 LvV~vHGL~G~~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~~~--T~~gI~~~g~rL~~eI~~~~~~~~~~~~~IsfI 83 (217)
T PF05057_consen 6 LVVFVHGLWGNPADMRYLKNHLEKIPEDLPNARIVVLGYSNNEFK--TFDGIDVCGERLAEEILEHIKDYESKIRKISFI 83 (217)
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHHhhhhcchhhhhhhcccccccc--cchhhHHHHHHHHHHHHHhccccccccccceEE
Confidence 799999999999999888777764 1222112222222211111 11111111223444444444444333 356777
Q ss_pred EecccchHHHHHHHH
Q 022534 114 VQGFLVGSYGLTWAL 128 (295)
Q Consensus 114 ~~G~~~G~~~~~~a~ 128 (295)
|||+|++.+.+|+
T Consensus 84 --gHSLGGli~r~al 96 (217)
T PF05057_consen 84 --GHSLGGLIARYAL 96 (217)
T ss_pred --EecccHHHHHHHH
Confidence 7777765444443
No 141
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=97.46 E-value=5.7e-05 Score=66.58 Aligned_cols=102 Identities=17% Similarity=0.272 Sum_probs=51.6
Q ss_pred CCceEEEEcCCCCCC--ccch-hhHHH-hhh--CCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---
Q 022534 34 RLGTIVFLHGAPSHS--YSYR-NVMSQ-MSD--AGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVL--- 104 (295)
Q Consensus 34 ~~~~vv~lHG~~~~~--~~w~-~~~~~-l~~--~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l--- 104 (295)
.+|++|++|||.++. ..|. .+.+. |.. .++.||++|+...- .. .|.............|..+++.|
T Consensus 70 ~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a--~~---~Y~~a~~n~~~vg~~la~~l~~L~~~ 144 (331)
T PF00151_consen 70 SKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGA--SN---NYPQAVANTRLVGRQLAKFLSFLINN 144 (331)
T ss_dssp TSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHH--SS----HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhc--cc---cccchhhhHHHHHHHHHHHHHHHHhh
Confidence 478999999998766 4565 34443 444 47999999996321 11 11000001122334444444433
Q ss_pred -CCC-CceEEEEecccchH-HHHHHHHhCcC--ccceeEEEcC
Q 022534 105 -EVK-YPFFLVVQGFLVGS-YGLTWALKNPS--RISKLAILNS 142 (295)
Q Consensus 105 -~~~-~~~~lv~~G~~~G~-~~~~~a~~~p~--~v~~lil~~~ 142 (295)
+++ ..++|| |||.|+ ++...+..... +|.+++-+++
T Consensus 145 ~g~~~~~ihlI--GhSLGAHvaG~aG~~~~~~~ki~rItgLDP 185 (331)
T PF00151_consen 145 FGVPPENIHLI--GHSLGAHVAGFAGKYLKGGGKIGRITGLDP 185 (331)
T ss_dssp H---GGGEEEE--EETCHHHHHHHHHHHTTT---SSEEEEES-
T ss_pred cCCChhHEEEE--eeccchhhhhhhhhhccCcceeeEEEecCc
Confidence 332 347887 677765 55444444444 8999998874
No 142
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.46 E-value=0.02 Score=47.63 Aligned_cols=245 Identities=11% Similarity=0.176 Sum_probs=123.6
Q ss_pred CCceEEEEcCCCCCCccchhhHHHhhh---CCCeEEEeCCCCCCCCC---CCCCCC-CCCCCCHHHHHHHHHHHHHHhCC
Q 022534 34 RLGTIVFLHGAPSHSYSYRNVMSQMSD---AGFHCFAPDWLGFGFSD---KPEKGY-DDFDFTENEFHEELDKLLDVLEV 106 (295)
Q Consensus 34 ~~~~vv~lHG~~~~~~~w~~~~~~l~~---~~~~via~Dl~G~G~S~---~~~~~~-~~~~~~~~~~~~~l~~~~~~l~~ 106 (295)
.++.++++-|.|+...-|.+++..|-. +.+.++.+...||-.-- +-.... ....|+++++++.=.+|++..-.
T Consensus 28 ~~~li~~IpGNPG~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik~~~P 107 (301)
T KOG3975|consen 28 DKPLIVWIPGNPGLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIKEYVP 107 (301)
T ss_pred CceEEEEecCCCCchhHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHHHhCC
Confidence 367888999999999999988877642 13679999988887432 111111 12356888999888888887533
Q ss_pred -CCceEEEEecccchHH-HHHHHH-hCcC-ccceeEEEcCCCC-CCCCCchh--hhhhh--cc----cch----hhhh-h
Q 022534 107 -KYPFFLVVQGFLVGSY-GLTWAL-KNPS-RISKLAILNSPLT-ASSPLPGL--FQQLR--IP----LLG----EFTA-Q 168 (295)
Q Consensus 107 -~~~~~lv~~G~~~G~~-~~~~a~-~~p~-~v~~lil~~~p~~-~~~~~~~~--~~~~~--~~----~~~----~~~~-~ 168 (295)
+..++++ |||.|++ .+.+.. ..++ +|.+.+++= |.. .....|.. +.... .+ +.. .+.. .
T Consensus 108 k~~ki~ii--GHSiGaYm~Lqil~~~k~~~~vqKa~~LF-PTIerM~eSpnG~~~t~~l~~~~hv~~lt~yi~~~~lp~~ 184 (301)
T KOG3975|consen 108 KDRKIYII--GHSIGAYMVLQILPSIKLVFSVQKAVLLF-PTIERMHESPNGIRLTKVLRYLPHVVSLTSYIYWILLPGF 184 (301)
T ss_pred CCCEEEEE--ecchhHHHHHHHhhhcccccceEEEEEec-chHHHHhcCCCceEeeeeeeeehhhhheeeeeeeecChHH
Confidence 3456666 7888886 334433 2222 455555542 221 11111110 00000 00 000 0000 0
Q ss_pred hHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcC--CCCCCCcEEEEEeCCCCC
Q 022534 169 NAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFS--SGSWDKPVLVAWGISDKY 246 (295)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~P~l~i~G~~D~~ 246 (295)
...+..++.-.... ...+....+..- ..+ ......... ..+...++..... -.+-.+-+-+.+|..|++
T Consensus 185 ir~~Li~~~l~~~n-----~p~e~l~tal~l-~h~--~v~rn~v~l-a~qEm~eV~~~d~e~~een~d~l~Fyygt~DgW 255 (301)
T KOG3975|consen 185 IRFILIKFMLCGSN-----GPQEFLSTALFL-THP--QVVRNSVGL-AAQEMEEVTTRDIEYCEENLDSLWFYYGTNDGW 255 (301)
T ss_pred HHHHHHHHhcccCC-----CcHHHHhhHHHh-hcH--HHHHHHhhh-chHHHHHHHHhHHHHHHhcCcEEEEEccCCCCC
Confidence 00011111100000 000000000000 000 000000000 0011111100000 002257888999999999
Q ss_pred CCcchHHHHHhcCCC-CeEEEEecCCCCCCCCCChHHHHHHHHHHH
Q 022534 247 LPQSVAEEFQKGNPN-VVKLQMIEGAGHMPQEDWPEKVVDGLRYFF 291 (295)
Q Consensus 247 ~~~~~~~~~~~~~~~-~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 291 (295)
+|.+....+++..|. +.++-. +++-|...+...+..+.++.+.+
T Consensus 256 ~p~~~~d~~kdd~~eed~~Lde-dki~HAFV~~~~q~ma~~v~d~~ 300 (301)
T KOG3975|consen 256 VPSHYYDYYKDDVPEEDLKLDE-DKIPHAFVVKHAQYMANAVFDMI 300 (301)
T ss_pred cchHHHHHHhhhcchhceeecc-ccCCcceeecccHHHHHHHHHhh
Confidence 999999999999986 345555 89999988888888888877765
No 143
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=97.38 E-value=0.00036 Score=51.21 Aligned_cols=45 Identities=13% Similarity=0.081 Sum_probs=27.7
Q ss_pred cceeeEEeCcEEEEEEEcCCCCCCCceEEEEcCCCCCCccchhhH
Q 022534 11 EYGSYIKSGEYRWFVRETGSADSRLGTIVFLHGAPSHSYSYRNVM 55 (295)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~g~~~~~~~~vv~lHG~~~~~~~w~~~~ 55 (295)
.--+.++++|+.+|+.......+...||||+|||++|-.+|..++
T Consensus 68 ~phf~t~I~g~~iHFih~rs~~~~aiPLll~HGWPgSf~Ef~~vI 112 (112)
T PF06441_consen 68 FPHFKTEIDGLDIHFIHVRSKRPNAIPLLLLHGWPGSFLEFLKVI 112 (112)
T ss_dssp S-EEEEEETTEEEEEEEE--S-TT-EEEEEE--SS--GGGGHHHH
T ss_pred CCCeeEEEeeEEEEEEEeeCCCCCCeEEEEECCCCccHHhHHhhC
Confidence 334556778999999666544445679999999999999887654
No 144
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=97.36 E-value=0.01 Score=50.88 Aligned_cols=60 Identities=30% Similarity=0.494 Sum_probs=49.1
Q ss_pred CcEEEEEeCCCCCCCcchHHHHHhcCCC-CeEEEEecCCCCCCCCCC-hH--HHHHHHHHHHHh
Q 022534 234 KPVLVAWGISDKYLPQSVAEEFQKGNPN-VVKLQMIEGAGHMPQEDW-PE--KVVDGLRYFFLN 293 (295)
Q Consensus 234 ~P~l~i~G~~D~~~~~~~~~~~~~~~~~-~~~~~~i~~~gH~~~~e~-p~--~~~~~i~~fl~~ 293 (295)
+|+|+++|.+|.+++...+..+.+.... ..+..++++++|...-.. +. +....+..|+.+
T Consensus 233 ~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~ 296 (299)
T COG1073 233 RPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLER 296 (299)
T ss_pred cceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHHHH
Confidence 8999999999999999998888776665 468899999999876544 42 677888888875
No 145
>PRK04940 hypothetical protein; Provisional
Probab=97.31 E-value=0.052 Score=43.31 Aligned_cols=51 Identities=16% Similarity=0.054 Sum_probs=36.9
Q ss_pred EEEEEeCCCCCCCcchHHHHHhcCCCCe-EEEEecCCCCCCCCCChHHHHHHHHHHHH
Q 022534 236 VLVAWGISDKYLPQSVAEEFQKGNPNVV-KLQMIEGAGHMPQEDWPEKVVDGLRYFFL 292 (295)
Q Consensus 236 ~l~i~G~~D~~~~~~~~~~~~~~~~~~~-~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 292 (295)
.+++..+.|.+.+...+....+ . + +..+.+|..|-. +.-++....|.+|+.
T Consensus 127 ~~vllq~gDEvLDyr~a~~~y~---~-~y~~~v~~GGdH~f--~~fe~~l~~I~~F~~ 178 (180)
T PRK04940 127 CLVILSRNDEVLDSQRTAEELH---P-YYEIVWDEEQTHKF--KNISPHLQRIKAFKT 178 (180)
T ss_pred EEEEEeCCCcccCHHHHHHHhc---c-CceEEEECCCCCCC--CCHHHHHHHHHHHHh
Confidence 4889999999998876655543 2 4 688899988865 444556677777763
No 146
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=97.25 E-value=0.031 Score=46.61 Aligned_cols=105 Identities=22% Similarity=0.322 Sum_probs=63.5
Q ss_pred ceEEEEcCCCCCCccchhhHHHhhhCCC------eEEEeCCCCCCCC----CC--CCCC----CCCCCCCHHHHHHHHHH
Q 022534 36 GTIVFLHGAPSHSYSYRNVMSQMSDAGF------HCFAPDWLGFGFS----DK--PEKG----YDDFDFTENEFHEELDK 99 (295)
Q Consensus 36 ~~vv~lHG~~~~~~~w~~~~~~l~~~~~------~via~Dl~G~G~S----~~--~~~~----~~~~~~~~~~~~~~l~~ 99 (295)
-|.|||||.+++..+...++..|..+ + =++..|--|-=.. ++ ..+- .....-+..++...+..
T Consensus 46 iPTIfIhGsgG~asS~~~Mv~ql~~~-~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~ 124 (288)
T COG4814 46 IPTIFIHGSGGTASSLNGMVNQLLPD-YKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKK 124 (288)
T ss_pred cceEEEecCCCChhHHHHHHHHhhhc-ccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHH
Confidence 48899999999999999999998753 4 2455565551111 11 0000 00111234566677766
Q ss_pred HHHHh----CCCCceEEEEecccchHHHH-HHHHh------CcCccceeEEEcCCCC
Q 022534 100 LLDVL----EVKYPFFLVVQGFLVGSYGL-TWALK------NPSRISKLAILNSPLT 145 (295)
Q Consensus 100 ~~~~l----~~~~~~~lv~~G~~~G~~~~-~~a~~------~p~~v~~lil~~~p~~ 145 (295)
++..| ++++ +-+| |||+|+.|+ .++.. +| .++.++.+++|+.
T Consensus 125 ~msyL~~~Y~i~k-~n~V--GhSmGg~~~~~Y~~~yg~dks~P-~lnK~V~l~gpfN 177 (288)
T COG4814 125 AMSYLQKHYNIPK-FNAV--GHSMGGLGLTYYMIDYGDDKSLP-PLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHHHhcCCce-eeee--eeccccHHHHHHHHHhcCCCCCc-chhheEEeccccc
Confidence 66655 5664 4455 888876554 34443 55 4788998887775
No 147
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=97.16 E-value=0.059 Score=45.30 Aligned_cols=61 Identities=18% Similarity=0.262 Sum_probs=49.7
Q ss_pred CCCCcEEEEEeCCCCCCCcchHHHHHh---cCCCCeEEEEecCCCCCCCC-CChHHHHHHHHHHH
Q 022534 231 SWDKPVLVAWGISDKYLPQSVAEEFQK---GNPNVVKLQMIEGAGHMPQE-DWPEKVVDGLRYFF 291 (295)
Q Consensus 231 ~~~~P~l~i~G~~D~~~~~~~~~~~~~---~~~~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl 291 (295)
...+|.|+|+++.|.+++.+..+++.+ ..+.+++...++++.|..|+ ++|++-.+++.+|+
T Consensus 176 ~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 176 PSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred CCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 457999999999999999887766643 23335789999999998876 57999999999885
No 148
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=97.15 E-value=0.0033 Score=57.88 Aligned_cols=92 Identities=15% Similarity=0.246 Sum_probs=55.4
Q ss_pred hHHHhhhC-CCeEEEeCCCCCCCCCCCCC-CCCCCCC-CHHHHHHHHHHHHHHhC------CCCceEEEEecccchHHHH
Q 022534 54 VMSQMSDA-GFHCFAPDWLGFGFSDKPEK-GYDDFDF-TENEFHEELDKLLDVLE------VKYPFFLVVQGFLVGSYGL 124 (295)
Q Consensus 54 ~~~~l~~~-~~~via~Dl~G~G~S~~~~~-~~~~~~~-~~~~~~~~l~~~~~~l~------~~~~~~lv~~G~~~G~~~~ 124 (295)
++-.|+++ |--+|++-+|=||+|..... ..++..| +.+.-..|++.|++.+. -+.|++++|+++ +|++++
T Consensus 50 ~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY-~G~Laa 128 (434)
T PF05577_consen 50 FMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSY-GGALAA 128 (434)
T ss_dssp HHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETH-HHHHHH
T ss_pred hHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcc-hhHHHH
Confidence 33445432 56899999999999984211 1112233 77777888888888753 123677775543 677777
Q ss_pred HHHHhCcCccceeEEEcCCCCC
Q 022534 125 TWALKNPSRISKLAILNSPLTA 146 (295)
Q Consensus 125 ~~a~~~p~~v~~lil~~~p~~~ 146 (295)
-+-++||+.|.+-+..++|...
T Consensus 129 w~r~kyP~~~~ga~ASSapv~a 150 (434)
T PF05577_consen 129 WFRLKYPHLFDGAWASSAPVQA 150 (434)
T ss_dssp HHHHH-TTT-SEEEEET--CCH
T ss_pred HHHhhCCCeeEEEEeccceeee
Confidence 7778999999998887777653
No 149
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=97.14 E-value=0.066 Score=52.70 Aligned_cols=221 Identities=17% Similarity=0.171 Sum_probs=117.8
Q ss_pred EEeCcEEEEEEEcCCCC----CCCceEEEEcCCCCCC-------ccchhhHHHhhhCCCeEEEeCCCCCCCCCCCC--CC
Q 022534 16 IKSGEYRWFVRETGSAD----SRLGTIVFLHGAPSHS-------YSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPE--KG 82 (295)
Q Consensus 16 ~~~~~~~~~~~~~g~~~----~~~~~vv~lHG~~~~~-------~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~--~~ 82 (295)
+..+|+..++...-++. .+-|.+|.+||.+++. -.|..+ .....|+-|+.+|-||-|.....- ..
T Consensus 503 i~~~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~--~~s~~g~~v~~vd~RGs~~~G~~~~~~~ 580 (755)
T KOG2100|consen 503 IEIDGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEV--VVSSRGFAVLQVDGRGSGGYGWDFRSAL 580 (755)
T ss_pred EEeccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHH--hhccCCeEEEEEcCCCcCCcchhHHHHh
Confidence 33478899888775422 2236777799998622 235444 244569999999999998775321 00
Q ss_pred CCCC-CCCHHHHHHHHHHHHHHhCCCC-ceEEEEecccchHH-HHHHHHhCcCcccee-EEEcCCCCCCCCCchhhhhhh
Q 022534 83 YDDF-DFTENEFHEELDKLLDVLEVKY-PFFLVVQGFLVGSY-GLTWALKNPSRISKL-AILNSPLTASSPLPGLFQQLR 158 (295)
Q Consensus 83 ~~~~-~~~~~~~~~~l~~~~~~l~~~~-~~~lv~~G~~~G~~-~~~~a~~~p~~v~~l-il~~~p~~~~~~~~~~~~~~~ 158 (295)
+.+. ..-++|....+..+++..-++. .+.+ .|||-|++ .+..+...|+++.+- +.+ +|..... ..
T Consensus 581 ~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i--~GwSyGGy~t~~~l~~~~~~~fkcgvav-aPVtd~~-~y------- 649 (755)
T KOG2100|consen 581 PRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAI--WGWSYGGYLTLKLLESDPGDVFKCGVAV-APVTDWL-YY------- 649 (755)
T ss_pred hhhcCCcchHHHHHHHHHHHhcccccHHHeEE--eccChHHHHHHHHhhhCcCceEEEEEEe-cceeeee-ee-------
Confidence 0000 1234566666666666543332 2323 37776665 445556777565555 444 4443210 00
Q ss_pred cccchhhhhhhHHHHHHHHHhCCCccccccccccccccccccCCchhHHHHHHHhcchhhhhHhhhcCcCCCCCCCcE-E
Q 022534 159 IPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPV-L 237 (295)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~-l 237 (295)
+....++++. .+... ..+ +.. +...... +.++.|. |
T Consensus 650 ----------ds~~terymg--~p~~~----------------~~~---y~e---~~~~~~~---------~~~~~~~~L 686 (755)
T KOG2100|consen 650 ----------DSTYTERYMG--LPSEN----------------DKG---YEE---SSVSSPA---------NNIKTPKLL 686 (755)
T ss_pred ----------cccccHhhcC--CCccc----------------cch---hhh---ccccchh---------hhhccCCEE
Confidence 0001122211 11000 000 000 0001111 1334444 9
Q ss_pred EEEeCCCCCCCcchHHHHHhcC---CCCeEEEEecCCCCCCCCCC-hHHHHHHHHHHHH
Q 022534 238 VAWGISDKYLPQSVAEEFQKGN---PNVVKLQMIEGAGHMPQEDW-PEKVVDGLRYFFL 292 (295)
Q Consensus 238 ~i~G~~D~~~~~~~~~~~~~~~---~~~~~~~~i~~~gH~~~~e~-p~~~~~~i~~fl~ 292 (295)
++||+.|..+..+.+..+.+.+ .-..++.++|+..|..-.-. -..+...+..|+.
T Consensus 687 liHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde~H~is~~~~~~~~~~~~~~~~~ 745 (755)
T KOG2100|consen 687 LIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDENHGISYVEVISHLYEKLDRFLR 745 (755)
T ss_pred EEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCCCcccccccchHHHHHHHHHHHH
Confidence 9999999999877766665432 12379999999999875433 2445566666665
No 150
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=97.10 E-value=0.029 Score=45.00 Aligned_cols=92 Identities=17% Similarity=0.347 Sum_probs=59.8
Q ss_pred eEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CCCCceEE
Q 022534 37 TIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVL----EVKYPFFL 112 (295)
Q Consensus 37 ~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l----~~~~~~~l 112 (295)
.+||+=|=++-...=..+++.|+++|+.|+-+|-+=|=+|.+ +.++.+.|+..+++.. +.+ .++|
T Consensus 4 ~~v~~SGDgGw~~~d~~~a~~l~~~G~~VvGvdsl~Yfw~~r----------tP~~~a~Dl~~~i~~y~~~w~~~-~vvL 72 (192)
T PF06057_consen 4 LAVFFSGDGGWRDLDKQIAEALAKQGVPVVGVDSLRYFWSER----------TPEQTAADLARIIRHYRARWGRK-RVVL 72 (192)
T ss_pred EEEEEeCCCCchhhhHHHHHHHHHCCCeEEEechHHHHhhhC----------CHHHHHHHHHHHHHHHHHHhCCc-eEEE
Confidence 456666655544333477788999999999999887766654 3456778888887765 334 4667
Q ss_pred EEecccchHHHHHHHH-h----CcCccceeEEEc
Q 022534 113 VVQGFLVGSYGLTWAL-K----NPSRISKLAILN 141 (295)
Q Consensus 113 v~~G~~~G~~~~~~a~-~----~p~~v~~lil~~ 141 (295)
| |+|-|+=.+-++. + ..++|+.++|++
T Consensus 73 i--GYSFGADvlP~~~nrLp~~~r~~v~~v~Ll~ 104 (192)
T PF06057_consen 73 I--GYSFGADVLPFIYNRLPAALRARVAQVVLLS 104 (192)
T ss_pred E--eecCCchhHHHHHhhCCHHHHhheeEEEEec
Confidence 6 7777752222222 2 234788888884
No 151
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=97.00 E-value=0.0096 Score=55.30 Aligned_cols=47 Identities=28% Similarity=0.362 Sum_probs=39.3
Q ss_pred CCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCC
Q 022534 231 SWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQE 277 (295)
Q Consensus 231 ~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~ 277 (295)
.++.|+|||-|..|.-+.++.-+.+++......++++|.+++|.+-.
T Consensus 302 dmk~PVLFV~Gsnd~mcspn~ME~vreKMqA~~elhVI~~adhsmai 348 (784)
T KOG3253|consen 302 DMKQPVLFVIGSNDHMCSPNSMEEVREKMQAEVELHVIGGADHSMAI 348 (784)
T ss_pred hcCCceEEEecCCcccCCHHHHHHHHHHhhccceEEEecCCCccccC
Confidence 34799999999999999988888887665545799999999997654
No 152
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=97.00 E-value=0.087 Score=48.53 Aligned_cols=80 Identities=19% Similarity=0.304 Sum_probs=53.7
Q ss_pred hhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC-----CCCceEEEEeccc-chHHHHHH
Q 022534 53 NVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLE-----VKYPFFLVVQGFL-VGSYGLTW 126 (295)
Q Consensus 53 ~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~-----~~~~~~lv~~G~~-~G~~~~~~ 126 (295)
.+-..|.+ |+.||.+... .-|.++- ++++.......|++.+. ..+| .++ |.. +|-.++++
T Consensus 92 evG~AL~~-GHPvYFV~F~-----p~P~pgQ-----Tl~DV~~ae~~Fv~~V~~~hp~~~kp-~li--GnCQgGWa~~ml 157 (581)
T PF11339_consen 92 EVGVALRA-GHPVYFVGFF-----PEPEPGQ-----TLEDVMRAEAAFVEEVAERHPDAPKP-NLI--GNCQGGWAAMML 157 (581)
T ss_pred HHHHHHHc-CCCeEEEEec-----CCCCCCC-----cHHHHHHHHHHHHHHHHHhCCCCCCc-eEE--eccHHHHHHHHH
Confidence 45556765 8999988665 2233321 67777777777777652 2344 455 554 44456788
Q ss_pred HHhCcCccceeEEEcCCCCC
Q 022534 127 ALKNPSRISKLAILNSPLTA 146 (295)
Q Consensus 127 a~~~p~~v~~lil~~~p~~~ 146 (295)
|+.+|+.+..+|+.++|...
T Consensus 158 AA~~Pd~~gplvlaGaPlsy 177 (581)
T PF11339_consen 158 AALRPDLVGPLVLAGAPLSY 177 (581)
T ss_pred HhcCcCccCceeecCCCccc
Confidence 99999999999998888653
No 153
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=96.75 E-value=0.011 Score=51.43 Aligned_cols=99 Identities=13% Similarity=0.277 Sum_probs=58.0
Q ss_pred CceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH-HHHhCCC-CceEE
Q 022534 35 LGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKL-LDVLEVK-YPFFL 112 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~-~~~l~~~-~~~~l 112 (295)
+.-|||.-|..+--.. .-+...+ +.||.|.-+.+|||+.|....-.. ....-++.+.++ +..++.. +.++|
T Consensus 243 q~LvIC~EGNAGFYEv-G~m~tP~-~lgYsvLGwNhPGFagSTG~P~p~-----n~~nA~DaVvQfAI~~Lgf~~edIil 315 (517)
T KOG1553|consen 243 QDLVICFEGNAGFYEV-GVMNTPA-QLGYSVLGWNHPGFAGSTGLPYPV-----NTLNAADAVVQFAIQVLGFRQEDIIL 315 (517)
T ss_pred ceEEEEecCCccceEe-eeecChH-HhCceeeccCCCCccccCCCCCcc-----cchHHHHHHHHHHHHHcCCCccceEE
Confidence 3467777776542111 0111233 359999999999999998743211 112233334443 5556653 23555
Q ss_pred EEecccchHHHHHHHH-hCcCccceeEEEcCCC
Q 022534 113 VVQGFLVGSYGLTWAL-KNPSRISKLAILNSPL 144 (295)
Q Consensus 113 v~~G~~~G~~~~~~a~-~~p~~v~~lil~~~p~ 144 (295)
. |||.|++...||+ .||| |+++|+- +.+
T Consensus 316 y--gWSIGGF~~~waAs~YPd-VkavvLD-AtF 344 (517)
T KOG1553|consen 316 Y--GWSIGGFPVAWAASNYPD-VKAVVLD-ATF 344 (517)
T ss_pred E--EeecCCchHHHHhhcCCC-ceEEEee-cch
Confidence 5 8988877666655 7997 7888764 444
No 154
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=96.68 E-value=0.0044 Score=52.32 Aligned_cols=107 Identities=13% Similarity=0.114 Sum_probs=56.1
Q ss_pred CCCceEEEEcCCCCCCccc--hhhHHHhhhCC----CeEEEeCCCCCCCCCCC---------CCCCCCCCCC-HHHHHHH
Q 022534 33 SRLGTIVFLHGAPSHSYSY--RNVMSQMSDAG----FHCFAPDWLGFGFSDKP---------EKGYDDFDFT-ENEFHEE 96 (295)
Q Consensus 33 ~~~~~vv~lHG~~~~~~~w--~~~~~~l~~~~----~~via~Dl~G~G~S~~~---------~~~~~~~~~~-~~~~~~~ 96 (295)
.+-|+|+++||.......| ...++.+.+.+ .-+|++|..+.+.-... .......... .+.+.++
T Consensus 22 ~~~PvlylldG~~~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~e 101 (251)
T PF00756_consen 22 KPYPVLYLLDGQSGWFRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSRRADDSGGGDAYETFLTEE 101 (251)
T ss_dssp TTEEEEEEESHTTHHHHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTCBCTSTTTHHHHHHHHHTH
T ss_pred CCCEEEEEccCCccccccchHHHHHHHHHHhCCCCceEEEEEecccccccccccccccccccccccCCCCcccceehhcc
Confidence 3357899999972211122 23333333322 44677777665511110 0000000001 1334566
Q ss_pred HHHHHHH-hCCCCc-eEEEEecccchHH-HHHHHHhCcCccceeEEEc
Q 022534 97 LDKLLDV-LEVKYP-FFLVVQGFLVGSY-GLTWALKNPSRISKLAILN 141 (295)
Q Consensus 97 l~~~~~~-l~~~~~-~~lv~~G~~~G~~-~~~~a~~~p~~v~~lil~~ 141 (295)
|..++++ ...... ..++ |+|+|++ ++.+++++|+.+.+++.++
T Consensus 102 l~p~i~~~~~~~~~~~~i~--G~S~GG~~Al~~~l~~Pd~F~~~~~~S 147 (251)
T PF00756_consen 102 LIPYIEANYRTDPDRRAIA--GHSMGGYGALYLALRHPDLFGAVIAFS 147 (251)
T ss_dssp HHHHHHHHSSEEECCEEEE--EETHHHHHHHHHHHHSTTTESEEEEES
T ss_pred chhHHHHhcccccceeEEe--ccCCCcHHHHHHHHhCccccccccccC
Confidence 6777665 333322 3443 7787765 5667889999999999885
No 155
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=96.68 E-value=0.0072 Score=53.64 Aligned_cols=100 Identities=16% Similarity=0.197 Sum_probs=69.7
Q ss_pred ceEEEEcCCCCCCccchhhHHHhhhCCCe---EEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEE
Q 022534 36 GTIVFLHGAPSHSYSYRNVMSQMSDAGFH---CFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFL 112 (295)
Q Consensus 36 ~~vv~lHG~~~~~~~w~~~~~~l~~~~~~---via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~l 112 (295)
-|++++||+..+...|..+...+...++. ++++++++-..+.. . .-..+.+.+.|.+++...+.+ ++.|
T Consensus 60 ~pivlVhG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~------~~~~~ql~~~V~~~l~~~ga~-~v~L 131 (336)
T COG1075 60 EPIVLVHGLGGGYGNFLPLDYRLAILGWLTNGVYAFELSGGDGTYS-L------AVRGEQLFAYVDEVLAKTGAK-KVNL 131 (336)
T ss_pred ceEEEEccCcCCcchhhhhhhhhcchHHHhcccccccccccCCCcc-c------cccHHHHHHHHHHHHhhcCCC-ceEE
Confidence 48999999988888888877777766777 88888886621111 1 113456777888888777765 4677
Q ss_pred EEecccchHH-HHHHHHhCc--CccceeEEEcCCCC
Q 022534 113 VVQGFLVGSY-GLTWALKNP--SRISKLAILNSPLT 145 (295)
Q Consensus 113 v~~G~~~G~~-~~~~a~~~p--~~v~~lil~~~p~~ 145 (295)
+ |||+|+. ...++...+ .+|++++.++.|-.
T Consensus 132 i--gHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~ 165 (336)
T COG1075 132 I--GHSMGGLDSRYYLGVLGGANRVASVVTLGTPHH 165 (336)
T ss_pred E--eecccchhhHHHHhhcCccceEEEEEEeccCCC
Confidence 7 6677654 444555666 79999999887654
No 156
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=96.64 E-value=0.06 Score=48.06 Aligned_cols=60 Identities=20% Similarity=0.307 Sum_probs=51.5
Q ss_pred CCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 231 SWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 231 ~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
++++|.++|.|..|....+..+..+...++..+.+..+||++|..-. ..+.+.+..|+..
T Consensus 260 rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G~K~lr~vPN~~H~~~~---~~~~~~l~~f~~~ 319 (367)
T PF10142_consen 260 RLTMPKYIINATGDEFFVPDSSNFYYDKLPGEKYLRYVPNAGHSLIG---SDVVQSLRAFYNR 319 (367)
T ss_pred hcCccEEEEecCCCceeccCchHHHHhhCCCCeeEEeCCCCCcccch---HHHHHHHHHHHHH
Confidence 56899999999999999898899999999888899999999998755 5566777777754
No 157
>COG4099 Predicted peptidase [General function prediction only]
Probab=96.60 E-value=0.029 Score=47.88 Aligned_cols=101 Identities=18% Similarity=0.217 Sum_probs=54.4
Q ss_pred ceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCC-CCCCCC--CCC---CC-CCCCHHHHHHHHH-HHHHHhCCC
Q 022534 36 GTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFG-FSDKPE--KGY---DD-FDFTENEFHEELD-KLLDVLEVK 107 (295)
Q Consensus 36 ~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G-~S~~~~--~~~---~~-~~~~~~~~~~~l~-~~~~~l~~~ 107 (295)
|-+||+||.+.....-+. .+. .|..-++.++|-++ .--.|+ +-. +. .+-......+.+. .+.+..+++
T Consensus 192 PLvlfLHgagq~g~dn~~---~l~-sg~gaiawa~pedqcfVlAPQy~~if~d~e~~t~~~l~~~idli~~vlas~ynID 267 (387)
T COG4099 192 PLVLFLHGAGQGGSDNDK---VLS-SGIGAIAWAGPEDQCFVLAPQYNPIFADSEEKTLLYLIEKIDLILEVLASTYNID 267 (387)
T ss_pred cEEEEEecCCCCCchhhh---hhh-cCccceeeecccCceEEEcccccccccccccccchhHHHHHHHHHHHHhhccCcc
Confidence 789999999876654322 333 25566666666655 111111 000 00 0001122233333 233345665
Q ss_pred Cc-eEEEEecccchHHH-HHHHHhCcCccceeEEEcC
Q 022534 108 YP-FFLVVQGFLVGSYG-LTWALKNPSRISKLAILNS 142 (295)
Q Consensus 108 ~~-~~lv~~G~~~G~~~-~~~a~~~p~~v~~lil~~~ 142 (295)
+. +.++ |.|+|++| +.++.++|+.+.+.++++.
T Consensus 268 ~sRIYvi--GlSrG~~gt~al~~kfPdfFAaa~~iaG 302 (387)
T COG4099 268 RSRIYVI--GLSRGGFGTWALAEKFPDFFAAAVPIAG 302 (387)
T ss_pred cceEEEE--eecCcchhhHHHHHhCchhhheeeeecC
Confidence 32 3333 78888764 5667799999998888753
No 158
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=96.37 E-value=0.028 Score=52.57 Aligned_cols=124 Identities=13% Similarity=0.033 Sum_probs=71.4
Q ss_pred eeEEe-CcEEEEEEEcCCC-CCCCceEEEEcCCCCCCc---cc--hhhHH---HhhhCCCeEEEeCCCCCCCCCCCCCCC
Q 022534 14 SYIKS-GEYRWFVRETGSA-DSRLGTIVFLHGAPSHSY---SY--RNVMS---QMSDAGFHCFAPDWLGFGFSDKPEKGY 83 (295)
Q Consensus 14 ~~~~~-~~~~~~~~~~g~~-~~~~~~vv~lHG~~~~~~---~w--~~~~~---~l~~~~~~via~Dl~G~G~S~~~~~~~ 83 (295)
..|.. +|++++...+.+. ..+.|+++..+=++=... .+ ....+ .++++||.|+..|.||.|.|+.....+
T Consensus 22 v~V~MRDGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG~~~~~ 101 (563)
T COG2936 22 VMVPMRDGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEGVFDPE 101 (563)
T ss_pred eeEEecCCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCCccccee
Confidence 34444 6899998888654 244678888883221111 11 12223 467789999999999999999743221
Q ss_pred CCCCCC-H-HHHHHHHHHHHHHhCC-CCceEEEEecccchHH-HHHHHHhCcCccceeEEEcCCC
Q 022534 84 DDFDFT-E-NEFHEELDKLLDVLEV-KYPFFLVVQGFLVGSY-GLTWALKNPSRISKLAILNSPL 144 (295)
Q Consensus 84 ~~~~~~-~-~~~~~~l~~~~~~l~~-~~~~~lv~~G~~~G~~-~~~~a~~~p~~v~~lil~~~p~ 144 (295)
++ + +|- -|+++++.+.-. +..+-.+ |.|-+++ .+.+|+..|..++.++-..+..
T Consensus 102 ----~~~E~~Dg-~D~I~Wia~QpWsNG~Vgm~--G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~ 159 (563)
T COG2936 102 ----SSREAEDG-YDTIEWLAKQPWSNGNVGML--GLSYLGFTQLAAAALQPPALKAIAPTEGLV 159 (563)
T ss_pred ----ccccccch-hHHHHHHHhCCccCCeeeee--cccHHHHHHHHHHhcCCchheeeccccccc
Confidence 12 1 122 366666666543 3334333 5555444 3445566666677666554433
No 159
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=96.18 E-value=0.034 Score=52.05 Aligned_cols=105 Identities=11% Similarity=0.107 Sum_probs=55.4
Q ss_pred CCCceEEEEcCCC---CCCccchhhHHHhhhC-C-CeEEEeCCC----CCCCCCCCCCCCCCCCCCHHHHHHHHH---HH
Q 022534 33 SRLGTIVFLHGAP---SHSYSYRNVMSQMSDA-G-FHCFAPDWL----GFGFSDKPEKGYDDFDFTENEFHEELD---KL 100 (295)
Q Consensus 33 ~~~~~vv~lHG~~---~~~~~w~~~~~~l~~~-~-~~via~Dl~----G~G~S~~~~~~~~~~~~~~~~~~~~l~---~~ 100 (295)
.+.|+||++||.+ ++...+ ....|+.. + +-|+.++.| ||+.+..... ..++.+.|+...+. +-
T Consensus 93 ~~~pv~v~ihGG~~~~g~~~~~--~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~---~~n~g~~D~~~al~wv~~~ 167 (493)
T cd00312 93 NSLPVMVWIHGGGFMFGSGSLY--PGDGLAREGDNVIVVSINYRLGVLGFLSTGDIEL---PGNYGLKDQRLALKWVQDN 167 (493)
T ss_pred CCCCEEEEEcCCccccCCCCCC--ChHHHHhcCCCEEEEEecccccccccccCCCCCC---CcchhHHHHHHHHHHHHHH
Confidence 3468999999964 233222 22344433 3 899999999 4544432211 11233455544443 33
Q ss_pred HHHhCCC-CceEEEEecccchHH-HHHHHHh--CcCccceeEEEcCCC
Q 022534 101 LDVLEVK-YPFFLVVQGFLVGSY-GLTWALK--NPSRISKLAILNSPL 144 (295)
Q Consensus 101 ~~~l~~~-~~~~lv~~G~~~G~~-~~~~a~~--~p~~v~~lil~~~p~ 144 (295)
++..+.+ +.+++. |+|.|+. +..++.. .+..++++|+.+.+.
T Consensus 168 i~~fggd~~~v~~~--G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~ 213 (493)
T cd00312 168 IAAFGGDPDSVTIF--GESAGGASVSLLLLSPDSKGLFHRAISQSGSA 213 (493)
T ss_pred HHHhCCCcceEEEE--eecHHHHHhhhHhhCcchhHHHHHHhhhcCCc
Confidence 4444543 335665 6666653 3333332 345688888776543
No 160
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=96.17 E-value=0.049 Score=49.72 Aligned_cols=110 Identities=13% Similarity=0.161 Sum_probs=68.6
Q ss_pred CceEEEEcCCCCCCccch----hhHHHhh-hCCCeEEEeCCCCCCCCCCCCC-CCCCCCC-CHHHHHHHHHHHHHHhCCC
Q 022534 35 LGTIVFLHGAPSHSYSYR----NVMSQMS-DAGFHCFAPDWLGFGFSDKPEK-GYDDFDF-TENEFHEELDKLLDVLEVK 107 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~~w~----~~~~~l~-~~~~~via~Dl~G~G~S~~~~~-~~~~~~~-~~~~~~~~l~~~~~~l~~~ 107 (295)
.|.-|+|-|=+.....|- ..+-.++ +-|-.|+...+|=||.|..-.. ..++..| |......|+++||++++.+
T Consensus 86 gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n~k 165 (514)
T KOG2182|consen 86 GPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMNAK 165 (514)
T ss_pred CceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHHhh
Confidence 356777777443333341 1122233 2366899999999999964221 1112222 5566778999999987542
Q ss_pred ----C--ceEEEEecccchHHHHHHHHhCcCccceeEEEcCCCC
Q 022534 108 ----Y--PFFLVVQGFLVGSYGLTWALKNPSRISKLAILNSPLT 145 (295)
Q Consensus 108 ----~--~~~lv~~G~~~G~~~~~~a~~~p~~v~~lil~~~p~~ 145 (295)
. |++.+|+++ .|++++-+-.+||+.+.+-+..++|..
T Consensus 166 ~n~~~~~~WitFGgSY-sGsLsAW~R~~yPel~~GsvASSapv~ 208 (514)
T KOG2182|consen 166 FNFSDDSKWITFGGSY-SGSLSAWFREKYPELTVGSVASSAPVL 208 (514)
T ss_pred cCCCCCCCeEEECCCc-hhHHHHHHHHhCchhheeeccccccee
Confidence 2 677764433 467766666799999998887777764
No 161
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=95.97 E-value=0.014 Score=37.98 Aligned_cols=36 Identities=11% Similarity=0.194 Sum_probs=19.9
Q ss_pred EeCcEEEEEEEcCC------CCCCCceEEEEcCCCCCCccch
Q 022534 17 KSGEYRWFVRETGS------ADSRLGTIVFLHGAPSHSYSYR 52 (295)
Q Consensus 17 ~~~~~~~~~~~~g~------~~~~~~~vv~lHG~~~~~~~w~ 52 (295)
+-+|+.+...-.-. ....+|||++.||+.+++..|-
T Consensus 19 T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~wv 60 (63)
T PF04083_consen 19 TEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDDWV 60 (63)
T ss_dssp -TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGGGC
T ss_pred eCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHHHH
Confidence 34688887755422 2234789999999999999984
No 162
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=95.90 E-value=0.16 Score=44.51 Aligned_cols=81 Identities=17% Similarity=0.255 Sum_probs=49.5
Q ss_pred ceEEEEcCCCCCCcc----------chhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-
Q 022534 36 GTIVFLHGAPSHSYS----------YRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVL- 104 (295)
Q Consensus 36 ~~vv~lHG~~~~~~~----------w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l- 104 (295)
--||+.-|.++.-+. |..++. +.+-.|+.+.+||.|.|.++. +.++++.+-.++++.+
T Consensus 138 RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak---~~~aNvl~fNYpGVg~S~G~~--------s~~dLv~~~~a~v~yL~ 206 (365)
T PF05677_consen 138 RWILVSNGNGECYENRAMLDYKDDWIQRFAK---ELGANVLVFNYPGVGSSTGPP--------SRKDLVKDYQACVRYLR 206 (365)
T ss_pred cEEEEEcCChHHhhhhhhhccccHHHHHHHH---HcCCcEEEECCCccccCCCCC--------CHHHHHHHHHHHHHHHH
Confidence 378888887653322 333333 346799999999999998753 2356666666665554
Q ss_pred ----CCCCceEEEEecccch-HHHHHHHHh
Q 022534 105 ----EVKYPFFLVVQGFLVG-SYGLTWALK 129 (295)
Q Consensus 105 ----~~~~~~~lv~~G~~~G-~~~~~~a~~ 129 (295)
|.+ +--+++.|||.| ++++. |++
T Consensus 207 d~~~G~k-a~~Ii~yG~SLGG~Vqa~-AL~ 234 (365)
T PF05677_consen 207 DEEQGPK-AKNIILYGHSLGGGVQAE-ALK 234 (365)
T ss_pred hcccCCC-hheEEEeeccccHHHHHH-HHH
Confidence 222 334556688765 45443 443
No 163
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=95.78 E-value=0.029 Score=45.83 Aligned_cols=59 Identities=17% Similarity=0.312 Sum_probs=45.7
Q ss_pred CCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 231 SWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 231 ~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
.+++|+|-|.|+.|.+++.+.+..+++.+++. + ++.=..||+++-.. ...+.|.+|+.+
T Consensus 161 ~i~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a-~-vl~HpggH~VP~~~--~~~~~i~~fi~~ 219 (230)
T KOG2551|consen 161 PLSTPSLHIFGETDTIVPSERSEQLAESFKDA-T-VLEHPGGHIVPNKA--KYKEKIADFIQS 219 (230)
T ss_pred CCCCCeeEEecccceeecchHHHHHHHhcCCC-e-EEecCCCccCCCch--HHHHHHHHHHHH
Confidence 56899999999999999999999999999974 4 44445799876544 455666666654
No 164
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=95.78 E-value=0.11 Score=47.46 Aligned_cols=102 Identities=14% Similarity=0.157 Sum_probs=54.4
Q ss_pred CCceEEEEcCCC--CCCccchhhHHHhhhCC----CeEEEeCCCCCCCCCCCCCCCC-CCCCCHHHHHHHHHHHHHHh-C
Q 022534 34 RLGTIVFLHGAP--SHSYSYRNVMSQMSDAG----FHCFAPDWLGFGFSDKPEKGYD-DFDFTENEFHEELDKLLDVL-E 105 (295)
Q Consensus 34 ~~~~vv~lHG~~--~~~~~w~~~~~~l~~~~----~~via~Dl~G~G~S~~~~~~~~-~~~~~~~~~~~~l~~~~~~l-~ 105 (295)
+.|+|+++||-. .....+ ..++.|.+.| .-++.+|-.. ...+.. .+. +..| .+.++++|.-++++. .
T Consensus 208 ~~PvlyllDG~~w~~~~~~~-~~ld~li~~g~i~P~ivV~id~~~--~~~R~~-el~~~~~f-~~~l~~eLlP~I~~~y~ 282 (411)
T PRK10439 208 ERPLAILLDGQFWAESMPVW-PALDSLTHRGQLPPAVYLLIDAID--TTHRSQ-ELPCNADF-WLAVQQELLPQVRAIAP 282 (411)
T ss_pred CCCEEEEEECHHhhhcCCHH-HHHHHHHHcCCCCceEEEEECCCC--cccccc-cCCchHHH-HHHHHHHHHHHHHHhCC
Confidence 357899999953 222222 3445554444 2367888632 111111 110 1011 233456666666653 2
Q ss_pred C--C-CceEEEEecccchHH-HHHHHHhCcCccceeEEEcC
Q 022534 106 V--K-YPFFLVVQGFLVGSY-GLTWALKNPSRISKLAILNS 142 (295)
Q Consensus 106 ~--~-~~~~lv~~G~~~G~~-~~~~a~~~p~~v~~lil~~~ 142 (295)
. + +...+. |+|+|++ ++..++++|+.+.+++.+++
T Consensus 283 ~~~d~~~~~Ia--G~S~GGl~AL~~al~~Pd~Fg~v~s~Sg 321 (411)
T PRK10439 283 FSDDADRTVVA--GQSFGGLAALYAGLHWPERFGCVLSQSG 321 (411)
T ss_pred CCCCccceEEE--EEChHHHHHHHHHHhCcccccEEEEecc
Confidence 2 1 123343 7777765 55667899999999888753
No 165
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=95.62 E-value=0.013 Score=52.86 Aligned_cols=39 Identities=18% Similarity=0.399 Sum_probs=28.3
Q ss_pred CCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCC
Q 022534 34 RLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLG 72 (295)
Q Consensus 34 ~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G 72 (295)
.-|+|||-||++++-..+..+...||.+||=|+++|+|-
T Consensus 99 ~~PvvIFSHGlgg~R~~yS~~~~eLAS~GyVV~aieHrD 137 (379)
T PF03403_consen 99 KFPVVIFSHGLGGSRTSYSAICGELASHGYVVAAIEHRD 137 (379)
T ss_dssp -EEEEEEE--TT--TTTTHHHHHHHHHTT-EEEEE---S
T ss_pred CCCEEEEeCCCCcchhhHHHHHHHHHhCCeEEEEeccCC
Confidence 358999999999999999999999999999999999993
No 166
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.53 E-value=0.043 Score=48.18 Aligned_cols=104 Identities=15% Similarity=0.178 Sum_probs=55.1
Q ss_pred CCceEEEEcCCCCCC-ccchhhHHHhh--hCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCce
Q 022534 34 RLGTIVFLHGAPSHS-YSYRNVMSQMS--DAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPF 110 (295)
Q Consensus 34 ~~~~vv~lHG~~~~~-~~w~~~~~~l~--~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~ 110 (295)
.+..+||+||+.-+- ..=.+.++-.. .....++.+.||--|.--.-.-+.+...|+-+.+.+.|..+......++ +
T Consensus 115 ~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~~-I 193 (377)
T COG4782 115 AKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVKR-I 193 (377)
T ss_pred CCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCce-E
Confidence 356899999986422 22222233222 2346789999996664221110111223455555555555555444454 6
Q ss_pred EEEEecccchHHHHHH-----HHh----CcCccceeEEE
Q 022534 111 FLVVQGFLVGSYGLTW-----ALK----NPSRISKLAIL 140 (295)
Q Consensus 111 ~lv~~G~~~G~~~~~~-----a~~----~p~~v~~lil~ 140 (295)
+|+ +||||.+.+.- +.+ -+.+++-+|+.
T Consensus 194 ~il--AHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLA 230 (377)
T COG4782 194 YLL--AHSMGTWLLMEALRQLAIRADRPLPAKIKNVILA 230 (377)
T ss_pred EEE--EecchHHHHHHHHHHHhccCCcchhhhhhheEee
Confidence 676 56899864432 332 23457767665
No 167
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=95.46 E-value=0.12 Score=46.97 Aligned_cols=113 Identities=16% Similarity=0.304 Sum_probs=64.0
Q ss_pred eEEeCcEEEEEEEcCCCCCCCceEEEEc-CCCCCCccchhhHHHhhhCCCeE-----EE-eCCCCCCCCCCCCCCCCCCC
Q 022534 15 YIKSGEYRWFVRETGSADSRLGTIVFLH-GAPSHSYSYRNVMSQMSDAGFHC-----FA-PDWLGFGFSDKPEKGYDDFD 87 (295)
Q Consensus 15 ~~~~~~~~~~~~~~g~~~~~~~~vv~lH-G~~~~~~~w~~~~~~l~~~~~~v-----ia-~Dl~G~G~S~~~~~~~~~~~ 87 (295)
+-..+|+.+.+..+|... .|-.+- .+......|..+++.|.+.||+. .+ +|+| ....
T Consensus 34 ~~~~~gv~i~~~~~g~~~----~i~~ld~~~~~~~~~~~~li~~L~~~GY~~~~~l~~~pYDWR------~~~~------ 97 (389)
T PF02450_consen 34 YSNDPGVEIRVPGFGGTS----GIEYLDPSFITGYWYFAKLIENLEKLGYDRGKDLFAAPYDWR------LSPA------ 97 (389)
T ss_pred eecCCCceeecCCCCcee----eeeecccccccccchHHHHHHHHHhcCcccCCEEEEEeechh------hchh------
Confidence 333456666665555211 233332 22222237999999998766653 22 5666 1100
Q ss_pred CCHHHHHHHHHHHHHHh---CCCCceEEEEecccchHH-HHHHHHhCc------CccceeEEEcCCCCCC
Q 022534 88 FTENEFHEELDKLLDVL---EVKYPFFLVVQGFLVGSY-GLTWALKNP------SRISKLAILNSPLTAS 147 (295)
Q Consensus 88 ~~~~~~~~~l~~~~~~l---~~~~~~~lv~~G~~~G~~-~~~~a~~~p------~~v~~lil~~~p~~~~ 147 (295)
..+++...+..+++.. + +++++|| |||+|++ +..+....+ ..|+++|.+++|+...
T Consensus 98 -~~~~~~~~lk~~ie~~~~~~-~~kv~li--~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~~Gs 163 (389)
T PF02450_consen 98 -ERDEYFTKLKQLIEEAYKKN-GKKVVLI--AHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTPFGGS 163 (389)
T ss_pred -hHHHHHHHHHHHHHHHHHhc-CCcEEEE--EeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCCCCCC
Confidence 1235666666666654 3 5678888 6677764 434333332 2599999998887643
No 168
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=95.45 E-value=0.046 Score=48.18 Aligned_cols=60 Identities=15% Similarity=0.205 Sum_probs=46.7
Q ss_pred CCcEEEEEeCCCCCCCcchHHHHHhcCC------------------------CCeEEEEecCCCCCCCCCChHHHHHHHH
Q 022534 233 DKPVLVAWGISDKYLPQSVAEEFQKGNP------------------------NVVKLQMIEGAGHMPQEDWPEKVVDGLR 288 (295)
Q Consensus 233 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~------------------------~~~~~~~i~~~gH~~~~e~p~~~~~~i~ 288 (295)
.+++|+..|+.|.+|+....+.+.+.+. +..+++.+.+|||+++ ++|+...+.+.
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~m~~ 311 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 311 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHHHHH
Confidence 4899999999998887655544433222 1257788889999996 69999999999
Q ss_pred HHHHh
Q 022534 289 YFFLN 293 (295)
Q Consensus 289 ~fl~~ 293 (295)
+|+..
T Consensus 312 ~fi~~ 316 (319)
T PLN02213 312 RWISG 316 (319)
T ss_pred HHHcC
Confidence 99865
No 169
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=95.23 E-value=0.43 Score=41.86 Aligned_cols=61 Identities=15% Similarity=0.294 Sum_probs=38.6
Q ss_pred cceeeEEeCcEEEEE--EEcCCCCCCCceEEEEcCCCCCCcc---chhhHHHhhhCCCeEEEeCCCC
Q 022534 11 EYGSYIKSGEYRWFV--RETGSADSRLGTIVFLHGAPSHSYS---YRNVMSQMSDAGFHCFAPDWLG 72 (295)
Q Consensus 11 ~~~~~~~~~~~~~~~--~~~g~~~~~~~~vv~lHG~~~~~~~---w~~~~~~l~~~~~~via~Dl~G 72 (295)
+.=..++.++.++=. .... ....++.||+|||++++... -..+-..|.+.|...+++-+|-
T Consensus 62 ~e~~~L~~~~~~flaL~~~~~-~~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~ 127 (310)
T PF12048_consen 62 DEVQWLQAGEERFLALWRPAN-SAKPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPD 127 (310)
T ss_pred hhcEEeecCCEEEEEEEeccc-CCCCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCC
Confidence 333455556544433 2222 22346799999999887642 2344455777899999998886
No 170
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=95.08 E-value=0.18 Score=46.23 Aligned_cols=109 Identities=15% Similarity=0.161 Sum_probs=58.3
Q ss_pred CCCceEEEEcCCC---CCCcc-chhhHHHhhhCC-CeEEEeCCCC--CCCCCCCCC---CCCCCCCCHHHHH---HHHHH
Q 022534 33 SRLGTIVFLHGAP---SHSYS-YRNVMSQMSDAG-FHCFAPDWLG--FGFSDKPEK---GYDDFDFTENEFH---EELDK 99 (295)
Q Consensus 33 ~~~~~vv~lHG~~---~~~~~-w~~~~~~l~~~~-~~via~Dl~G--~G~S~~~~~---~~~~~~~~~~~~~---~~l~~ 99 (295)
.+.|++|+|||.+ ++... |.. -..|+++| +=|+.+++|= +|.=+-+.- .....+..+.|++ +.+.+
T Consensus 92 ~~~PVmV~IHGG~y~~Gs~s~~~yd-gs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~Gl~DqilALkWV~~ 170 (491)
T COG2272 92 EKLPVMVYIHGGGYIMGSGSEPLYD-GSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLGLLDQILALKWVRD 170 (491)
T ss_pred CCCcEEEEEeccccccCCCcccccC-hHHHHhcCCEEEEEeCcccccceeeehhhccccccccccccHHHHHHHHHHHHH
Confidence 3468999999963 33333 332 24577666 7888887761 221111100 0001112344543 55556
Q ss_pred HHHHhCCC-CceEEEEecccchHHHHHHHHhCcC---ccceeEEEcCCC
Q 022534 100 LLDVLEVK-YPFFLVVQGFLVGSYGLTWALKNPS---RISKLAILNSPL 144 (295)
Q Consensus 100 ~~~~l~~~-~~~~lv~~G~~~G~~~~~~a~~~p~---~v~~lil~~~p~ 144 (295)
-|+++|-+ +.+.|+ |.|.|++.+...+..|. .+.+.|+.|.+.
T Consensus 171 NIe~FGGDp~NVTl~--GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~ 217 (491)
T COG2272 171 NIEAFGGDPQNVTLF--GESAGAASILTLLAVPSAKGLFHRAIALSGAA 217 (491)
T ss_pred HHHHhCCCccceEEe--eccchHHHHHHhhcCccchHHHHHHHHhCCCC
Confidence 67777643 446776 67887654443334443 567777765444
No 171
>PLN02606 palmitoyl-protein thioesterase
Probab=95.02 E-value=0.36 Score=41.76 Aligned_cols=99 Identities=11% Similarity=0.141 Sum_probs=56.1
Q ss_pred ceEEEEcCCC--CCCccchhhHHHhhh-CCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC----CCC
Q 022534 36 GTIVFLHGAP--SHSYSYRNVMSQMSD-AGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLE----VKY 108 (295)
Q Consensus 36 ~~vv~lHG~~--~~~~~w~~~~~~l~~-~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~----~~~ 108 (295)
.|||+.||.+ ++......+.+.+.+ .++-+..+- .|-| ... ++.-... +.+..+++++. +.+
T Consensus 27 ~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~---~~~----s~~~~~~---~Qv~~vce~l~~~~~L~~ 95 (306)
T PLN02606 27 VPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNG---VQD----SLFMPLR---QQASIACEKIKQMKELSE 95 (306)
T ss_pred CCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCC---ccc----ccccCHH---HHHHHHHHHHhcchhhcC
Confidence 5899999998 666677777777752 243332222 3322 111 1111233 33333433332 223
Q ss_pred ceEEEEecccchH-HHHHHHHhCcC--ccceeEEEcCCCCCC
Q 022534 109 PFFLVVQGFLVGS-YGLTWALKNPS--RISKLAILNSPLTAS 147 (295)
Q Consensus 109 ~~~lv~~G~~~G~-~~~~~a~~~p~--~v~~lil~~~p~~~~ 147 (295)
-+.+| |+|=|+ +.-.++.+.|+ .|+.+|-+++|....
T Consensus 96 G~naI--GfSQGglflRa~ierc~~~p~V~nlISlggph~Gv 135 (306)
T PLN02606 96 GYNIV--AESQGNLVARGLIEFCDNAPPVINYVSLGGPHAGV 135 (306)
T ss_pred ceEEE--EEcchhHHHHHHHHHCCCCCCcceEEEecCCcCCc
Confidence 46666 777554 45566777776 599999999886544
No 172
>PLN02209 serine carboxypeptidase
Probab=94.60 E-value=0.12 Score=47.64 Aligned_cols=60 Identities=17% Similarity=0.248 Sum_probs=47.4
Q ss_pred CCcEEEEEeCCCCCCCcchHHHHHhcCC-----------------------C-CeEEEEecCCCCCCCCCChHHHHHHHH
Q 022534 233 DKPVLVAWGISDKYLPQSVAEEFQKGNP-----------------------N-VVKLQMIEGAGHMPQEDWPEKVVDGLR 288 (295)
Q Consensus 233 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~-----------------------~-~~~~~~i~~~gH~~~~e~p~~~~~~i~ 288 (295)
.+++|+..|+.|-+|+...++.+.+.+. . ..+++.+.+|||+++ .||++..+.+.
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp-~qP~~al~m~~ 429 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE-YLPEESSIMFQ 429 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC-cCHHHHHHHHH
Confidence 4899999999999998766655443322 1 256778899999996 69999999999
Q ss_pred HHHHh
Q 022534 289 YFFLN 293 (295)
Q Consensus 289 ~fl~~ 293 (295)
+|+.+
T Consensus 430 ~fi~~ 434 (437)
T PLN02209 430 RWISG 434 (437)
T ss_pred HHHcC
Confidence 99864
No 173
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=94.48 E-value=0.13 Score=47.17 Aligned_cols=60 Identities=15% Similarity=0.205 Sum_probs=47.4
Q ss_pred CCcEEEEEeCCCCCCCcchHHHHHhcCC------------------------CCeEEEEecCCCCCCCCCChHHHHHHHH
Q 022534 233 DKPVLVAWGISDKYLPQSVAEEFQKGNP------------------------NVVKLQMIEGAGHMPQEDWPEKVVDGLR 288 (295)
Q Consensus 233 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~------------------------~~~~~~~i~~~gH~~~~e~p~~~~~~i~ 288 (295)
++++|+..|+.|-+|+....+.+.+.+. +..+++.+.+|||+++ .+|++..+.+.
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp-~qP~~al~m~~ 425 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 425 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC-CCHHHHHHHHH
Confidence 5899999999999998766655433221 1256788899999996 69999999999
Q ss_pred HHHHh
Q 022534 289 YFFLN 293 (295)
Q Consensus 289 ~fl~~ 293 (295)
+|+..
T Consensus 426 ~Fi~~ 430 (433)
T PLN03016 426 RWISG 430 (433)
T ss_pred HHHcC
Confidence 99965
No 174
>COG3150 Predicted esterase [General function prediction only]
Probab=94.44 E-value=0.37 Score=37.78 Aligned_cols=84 Identities=23% Similarity=0.331 Sum_probs=49.5
Q ss_pred EEEEcCCCCCCccchhhH--HHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEEEEe
Q 022534 38 IVFLHGAPSHSYSYRNVM--SQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQ 115 (295)
Q Consensus 38 vv~lHG~~~~~~~w~~~~--~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~ 115 (295)
||+||||.+|..+.+.++ +.+.+ .. |-++.|-...+. .....++.+..++...+-..|. +|
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~~-~~-------~~i~y~~p~l~h------~p~~a~~ele~~i~~~~~~~p~-iv-- 64 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFIDE-DV-------RDIEYSTPHLPH------DPQQALKELEKAVQELGDESPL-IV-- 64 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHhc-cc-------cceeeecCCCCC------CHHHHHHHHHHHHHHcCCCCce-EE--
Confidence 899999998888876443 33433 23 334444432221 3456778888888888766554 44
Q ss_pred cccchH-HHHHHHHhCcCccceeEEEc
Q 022534 116 GFLVGS-YGLTWALKNPSRISKLAILN 141 (295)
Q Consensus 116 G~~~G~-~~~~~a~~~p~~v~~lil~~ 141 (295)
|.|.|+ ++..++.++ -+++++ ++
T Consensus 65 GssLGGY~At~l~~~~--Girav~-~N 88 (191)
T COG3150 65 GSSLGGYYATWLGFLC--GIRAVV-FN 88 (191)
T ss_pred eecchHHHHHHHHHHh--CChhhh-cC
Confidence 555554 555555555 355554 44
No 175
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=93.89 E-value=1.2 Score=41.96 Aligned_cols=123 Identities=14% Similarity=0.063 Sum_probs=69.5
Q ss_pred EEeCcEEEEEEEcC-C-CCCCCceEEEEcCCCC--CCccchhhHHHhhhCCCeEEEeCCCCCCCCCC------CCCCCCC
Q 022534 16 IKSGEYRWFVRETG-S-ADSRLGTIVFLHGAPS--HSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDK------PEKGYDD 85 (295)
Q Consensus 16 ~~~~~~~~~~~~~g-~-~~~~~~~vv~lHG~~~--~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~------~~~~~~~ 85 (295)
.+.+|.+|.|-..+ . ...++|++|+-=|..+ -.-.|......+.++|.-.+...+||=|.=.. ... +
T Consensus 400 tSkDGT~IPYFiv~K~~~~d~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~WH~Aa~k~---n 476 (648)
T COG1505 400 TSKDGTRIPYFIVRKGAKKDENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFGPEWHQAGMKE---N 476 (648)
T ss_pred EcCCCccccEEEEecCCcCCCCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccCHHHHHHHhhh---c
Confidence 34489999997775 1 1224677766555433 23356666666666798999999998775431 000 1
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCceEEEEeccc-chHHHHHHH-HhCcCccceeEEEcCCC
Q 022534 86 FDFTENEFHEELDKLLDVLEVKYPFFLVVQGFL-VGSYGLTWA-LKNPSRISKLAILNSPL 144 (295)
Q Consensus 86 ~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~-~G~~~~~~a-~~~p~~v~~lil~~~p~ 144 (295)
-+=..+|++....+++++ |+..|=.|-..|-| ||-+ ...| .++||.+.+++ +..|.
T Consensus 477 rq~vfdDf~AVaedLi~r-gitspe~lgi~GgSNGGLL-vg~alTQrPelfgA~v-~evPl 534 (648)
T COG1505 477 KQNVFDDFIAVAEDLIKR-GITSPEKLGIQGGSNGGLL-VGAALTQRPELFGAAV-CEVPL 534 (648)
T ss_pred chhhhHHHHHHHHHHHHh-CCCCHHHhhhccCCCCceE-EEeeeccChhhhCcee-eccch
Confidence 111346777777777765 45444333222222 3322 1122 47999887665 44554
No 176
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=93.10 E-value=0.46 Score=44.73 Aligned_cols=107 Identities=12% Similarity=0.112 Sum_probs=52.2
Q ss_pred CCceEEEEcCCC---CCC-ccchhhHHHhhhCCCeEEEeCCC----CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH--
Q 022534 34 RLGTIVFLHGAP---SHS-YSYRNVMSQMSDAGFHCFAPDWL----GFGFSDKPEKGYDDFDFTENEFHEELDKLLDV-- 103 (295)
Q Consensus 34 ~~~~vv~lHG~~---~~~-~~w~~~~~~l~~~~~~via~Dl~----G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~-- 103 (295)
+.|++|+|||.+ ++. .....-...++..+.=||++..| ||-.+...... ..++.+.|+...|.-+-+.
T Consensus 124 ~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~--~gN~Gl~Dq~~AL~WV~~nI~ 201 (535)
T PF00135_consen 124 KLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAP--SGNYGLLDQRLALKWVQDNIA 201 (535)
T ss_dssp SEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSH--BSTHHHHHHHHHHHHHHHHGG
T ss_pred ccceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccccC--chhhhhhhhHHHHHHHHhhhh
Confidence 469999999964 333 12333334445558889999887 44333322111 0244556665555544443
Q ss_pred -hCCC-CceEEEEecccchHH--HHHHHH-hCcCccceeEEEcCCC
Q 022534 104 -LEVK-YPFFLVVQGFLVGSY--GLTWAL-KNPSRISKLAILNSPL 144 (295)
Q Consensus 104 -l~~~-~~~~lv~~G~~~G~~--~~~~a~-~~p~~v~~lil~~~p~ 144 (295)
.|-+ +.+.|. |+|.|+. +.++.. .-...+.+.|+.+++.
T Consensus 202 ~FGGDp~~VTl~--G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~ 245 (535)
T PF00135_consen 202 AFGGDPDNVTLF--GQSAGAASVSLLLLSPSSKGLFHRAILQSGSA 245 (535)
T ss_dssp GGTEEEEEEEEE--EETHHHHHHHHHHHGGGGTTSBSEEEEES--T
T ss_pred hcccCCcceeee--eecccccccceeeecccccccccccccccccc
Confidence 4422 336665 6666643 233322 2345789998887643
No 177
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=92.95 E-value=0.27 Score=45.16 Aligned_cols=60 Identities=27% Similarity=0.312 Sum_probs=47.2
Q ss_pred CcEEEEEeCCCCCCCcchHHHHHhcC---------CC---------------CeEEEEecCCCCCCCCCChHHHHHHHHH
Q 022534 234 KPVLVAWGISDKYLPQSVAEEFQKGN---------PN---------------VVKLQMIEGAGHMPQEDWPEKVVDGLRY 289 (295)
Q Consensus 234 ~P~l~i~G~~D~~~~~~~~~~~~~~~---------~~---------------~~~~~~i~~~gH~~~~e~p~~~~~~i~~ 289 (295)
.++++..|+.|-++|....+..-+.+ |. +.+++.+.||||++..++|+.....+++
T Consensus 364 ~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~VP~~~p~~al~m~~~ 443 (454)
T KOG1282|consen 364 YRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHMVPYDKPESALIMFQR 443 (454)
T ss_pred eEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcccCCCCCcHHHHHHHHH
Confidence 79999999999999876655431111 10 1355888999999999999999999999
Q ss_pred HHHh
Q 022534 290 FFLN 293 (295)
Q Consensus 290 fl~~ 293 (295)
|+.+
T Consensus 444 fl~g 447 (454)
T KOG1282|consen 444 FLNG 447 (454)
T ss_pred HHcC
Confidence 9976
No 178
>PLN02633 palmitoyl protein thioesterase family protein
Probab=92.70 E-value=1.6 Score=37.92 Aligned_cols=101 Identities=14% Similarity=0.158 Sum_probs=52.7
Q ss_pred ceEEEEcCCCCCCc--cchhhHHHhhh-CCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-CCCCceE
Q 022534 36 GTIVFLHGAPSHSY--SYRNVMSQMSD-AGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVL-EVKYPFF 111 (295)
Q Consensus 36 ~~vv~lHG~~~~~~--~w~~~~~~l~~-~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l-~~~~~~~ 111 (295)
.|+|+.||.|.+-. .-..+.+.+.. .|.-++.+- -|.|. .. ++.....++++.+-+-+... .+.+-+.
T Consensus 26 ~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~---ig~~~--~~---s~~~~~~~Qve~vce~l~~~~~l~~G~n 97 (314)
T PLN02633 26 VPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLE---IGNGV--GD---SWLMPLTQQAEIACEKVKQMKELSQGYN 97 (314)
T ss_pred CCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEE---ECCCc--cc---cceeCHHHHHHHHHHHHhhchhhhCcEE
Confidence 48999999985433 23333333322 134444332 24431 11 22323344433333333321 1223466
Q ss_pred EEEecccchH-HHHHHHHhCcC--ccceeEEEcCCCCC
Q 022534 112 LVVQGFLVGS-YGLTWALKNPS--RISKLAILNSPLTA 146 (295)
Q Consensus 112 lv~~G~~~G~-~~~~~a~~~p~--~v~~lil~~~p~~~ 146 (295)
+| |+|=|+ ++-.++.+.|+ .|+.+|-+++|...
T Consensus 98 aI--GfSQGGlflRa~ierc~~~p~V~nlISlggph~G 133 (314)
T PLN02633 98 IV--GRSQGNLVARGLIEFCDGGPPVYNYISLAGPHAG 133 (314)
T ss_pred EE--EEccchHHHHHHHHHCCCCCCcceEEEecCCCCC
Confidence 66 777554 55566777776 59999999887654
No 179
>COG0627 Predicted esterase [General function prediction only]
Probab=92.04 E-value=0.96 Score=39.72 Aligned_cols=106 Identities=21% Similarity=0.306 Sum_probs=55.9
Q ss_pred CceEEEEcCCCCCCccch---hhHHHhhhCCCeEEEeCC--------------CCCCCCCCCCCCCC--CCC-CCHHH-H
Q 022534 35 LGTIVFLHGAPSHSYSYR---NVMSQMSDAGFHCFAPDW--------------LGFGFSDKPEKGYD--DFD-FTENE-F 93 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~~w~---~~~~~l~~~~~~via~Dl--------------~G~G~S~~~~~~~~--~~~-~~~~~-~ 93 (295)
-|++.++||..++...|. .+-......+.-++++|- .|-|.|=..+.... ... |..+. +
T Consensus 54 ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~tfl 133 (316)
T COG0627 54 IPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWETFL 133 (316)
T ss_pred CCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchhHHH
Confidence 467888999987754443 222223334666666632 23333311111000 111 33343 3
Q ss_pred HHHHHHHHH-HhCCCC---ceEEEEecccchHH-HHHHHHhCcCccceeEEEcC
Q 022534 94 HEELDKLLD-VLEVKY---PFFLVVQGFLVGSY-GLTWALKNPSRISKLAILNS 142 (295)
Q Consensus 94 ~~~l~~~~~-~l~~~~---~~~lv~~G~~~G~~-~~~~a~~~p~~v~~lil~~~ 142 (295)
.+.+-..++ +..... ...++ |||||+. |+.+|+++|++++++.-++.
T Consensus 134 ~~ELP~~~~~~f~~~~~~~~~aI~--G~SMGG~GAl~lA~~~pd~f~~~sS~Sg 185 (316)
T COG0627 134 TQELPALWEAAFPADGTGDGRAIA--GHSMGGYGALKLALKHPDRFKSASSFSG 185 (316)
T ss_pred HhhhhHHHHHhcCcccccCCceeE--EEeccchhhhhhhhhCcchhceeccccc
Confidence 466664444 443221 12333 7888765 56789999999998876643
No 180
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=92.01 E-value=0.22 Score=42.61 Aligned_cols=105 Identities=19% Similarity=0.211 Sum_probs=46.4
Q ss_pred ceEEEEcCCCCC---CccchhhHHHhhhC--CCeEEEeCCCCCCCC-CCCCCCCCCCCCCHHHHHHHHHHHHHHh-CCCC
Q 022534 36 GTIVFLHGAPSH---SYSYRNVMSQMSDA--GFHCFAPDWLGFGFS-DKPEKGYDDFDFTENEFHEELDKLLDVL-EVKY 108 (295)
Q Consensus 36 ~~vv~lHG~~~~---~~~w~~~~~~l~~~--~~~via~Dl~G~G~S-~~~~~~~~~~~~~~~~~~~~l~~~~~~l-~~~~ 108 (295)
.|||+.||++.+ +..+..+.+.+.+. |--|..+++ |-|.+ |... ++.-..+++++.+-+.++.. .+.+
T Consensus 6 ~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~i-g~~~~~D~~~----s~f~~v~~Qv~~vc~~l~~~p~L~~ 80 (279)
T PF02089_consen 6 LPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEI-GNDPSEDVEN----SFFGNVNDQVEQVCEQLANDPELAN 80 (279)
T ss_dssp --EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--S-SSSHHHHHHH----HHHSHHHHHHHHHHHHHHH-GGGTT
T ss_pred CcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEE-CCCcchhhhh----hHHHHHHHHHHHHHHHHhhChhhhc
Confidence 489999999864 34566555544432 444555554 22221 1110 11112344444444444432 1234
Q ss_pred ceEEEEecccchH-HHHHHHHhCcC-ccceeEEEcCCCCCC
Q 022534 109 PFFLVVQGFLVGS-YGLTWALKNPS-RISKLAILNSPLTAS 147 (295)
Q Consensus 109 ~~~lv~~G~~~G~-~~~~~a~~~p~-~v~~lil~~~p~~~~ 147 (295)
-+.+| |+|=|+ +.-.++.+.|+ .|+.+|.+++|....
T Consensus 81 G~~~I--GfSQGgl~lRa~vq~c~~~~V~nlISlggph~Gv 119 (279)
T PF02089_consen 81 GFNAI--GFSQGGLFLRAYVQRCNDPPVHNLISLGGPHMGV 119 (279)
T ss_dssp -EEEE--EETCHHHHHHHHHHH-TSS-EEEEEEES--TT-B
T ss_pred ceeee--eeccccHHHHHHHHHCCCCCceeEEEecCccccc
Confidence 46676 777665 44456667665 699999998886543
No 181
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=91.37 E-value=0.98 Score=40.65 Aligned_cols=105 Identities=15% Similarity=0.159 Sum_probs=61.7
Q ss_pred ceEEEEcCCCCCCccch-------hhHHHhhhCCCeEEEeCCCCCCCCCCC------CCCCCCCCCCHHHHHHHHHHHHH
Q 022534 36 GTIVFLHGAPSHSYSYR-------NVMSQMSDAGFHCFAPDWLGFGFSDKP------EKGYDDFDFTENEFHEELDKLLD 102 (295)
Q Consensus 36 ~~vv~lHG~~~~~~~w~-------~~~~~l~~~~~~via~Dl~G~G~S~~~------~~~~~~~~~~~~~~~~~l~~~~~ 102 (295)
.||+|--|.=++...|- ++++.|. --+|...+|=||+|..= ....-+|. +-++-..|.++++.
T Consensus 81 gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~~---AllVFaEHRyYGeS~PFG~~s~k~~~hlgyL-tseQALADfA~ll~ 156 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEWFANNTGFMWDLAPELK---ALLVFAEHRYYGESLPFGSQSYKDARHLGYL-TSEQALADFAELLT 156 (492)
T ss_pred CceEEEeCCcccHHHHHhccchHHhhhHhhC---ceEEEeehhccccCCCCcchhccChhhhccc-cHHHHHHHHHHHHH
Confidence 58999988765544432 4455553 47899999999999731 11100222 22233344444444
Q ss_pred Hh----CC-CCceEEEEecccchHHHHHHHHhCcCccceeEEEcCCCC
Q 022534 103 VL----EV-KYPFFLVVQGFLVGSYGLTWALKNPSRISKLAILNSPLT 145 (295)
Q Consensus 103 ~l----~~-~~~~~lv~~G~~~G~~~~~~a~~~p~~v~~lil~~~p~~ 145 (295)
.+ +. ..|++.+|+ .-||++++-+-++||.-|.+-...++|..
T Consensus 157 ~lK~~~~a~~~pvIafGG-SYGGMLaAWfRlKYPHiv~GAlAaSAPvl 203 (492)
T KOG2183|consen 157 FLKRDLSAEASPVIAFGG-SYGGMLAAWFRLKYPHIVLGALAASAPVL 203 (492)
T ss_pred HHhhccccccCcEEEecC-chhhHHHHHHHhcChhhhhhhhhccCceE
Confidence 43 32 245666532 23566677777899998888776666754
No 182
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=89.75 E-value=7.4 Score=34.98 Aligned_cols=104 Identities=16% Similarity=0.224 Sum_probs=51.7
Q ss_pred CceEEEEcCCCCCCccchhhHHHhh------hCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCC
Q 022534 35 LGTIVFLHGAPSHSYSYRNVMSQMS------DAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKY 108 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~~w~~~~~~l~------~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~ 108 (295)
.|+||++||+|=.-.....+++.|. + .-.+++.|.---. +... ++ .|-..+.+.++....+++..|.+
T Consensus 122 DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~-~~SILvLDYsLt~--~~~~-~~-~yPtQL~qlv~~Y~~Lv~~~G~~- 195 (374)
T PF10340_consen 122 DPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP-EVSILVLDYSLTS--SDEH-GH-KYPTQLRQLVATYDYLVESEGNK- 195 (374)
T ss_pred CcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC-CCeEEEEeccccc--cccC-CC-cCchHHHHHHHHHHHHHhccCCC-
Confidence 4899999998743333222222221 2 3477777765322 0000 11 12223445556666666555655
Q ss_pred ceEEEEecccc-hHHHHHHH--HhCcC---ccceeEEEcCCCCCC
Q 022534 109 PFFLVVQGFLV-GSYGLTWA--LKNPS---RISKLAILNSPLTAS 147 (295)
Q Consensus 109 ~~~lv~~G~~~-G~~~~~~a--~~~p~---~v~~lil~~~p~~~~ 147 (295)
.++|+ |-|. |.+++.+. ++.++ .-++++++ ||+...
T Consensus 196 nI~Lm--GDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLI-SPWv~l 237 (374)
T PF10340_consen 196 NIILM--GDSAGGNLALSFLQYLKKPNKLPYPKSAILI-SPWVNL 237 (374)
T ss_pred eEEEE--ecCccHHHHHHHHHHHhhcCCCCCCceeEEE-CCCcCC
Confidence 46665 5554 45554432 22211 13577777 677544
No 183
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=89.44 E-value=0.54 Score=45.58 Aligned_cols=97 Identities=20% Similarity=0.239 Sum_probs=53.6
Q ss_pred CceEEEEcCCCCCCccchhhHHH----------------hhhCCCeEEEeCCCC-----CCCCCCCCCCCCCCCCCHHHH
Q 022534 35 LGTIVFLHGAPSHSYSYRNVMSQ----------------MSDAGFHCFAPDWLG-----FGFSDKPEKGYDDFDFTENEF 93 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~~w~~~~~~----------------l~~~~~~via~Dl~G-----~G~S~~~~~~~~~~~~~~~~~ 93 (295)
.-||+||-|..|+-..=+-++.. .....|+.++.|+=+ ||+ ++.++
T Consensus 89 GIPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe~tAm~G~-------------~l~dQ 155 (973)
T KOG3724|consen 89 GIPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEEFTAMHGH-------------ILLDQ 155 (973)
T ss_pred CceEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccchhhhhccH-------------hHHHH
Confidence 45899999987765443332222 122457777777753 222 33444
Q ss_pred HHHHHHHHHHh-----C---C----CCceEEEEecccchHHHHHHHHhCc----CccceeEEEcCCCCC
Q 022534 94 HEELDKLLDVL-----E---V----KYPFFLVVQGFLVGSYGLTWALKNP----SRISKLAILNSPLTA 146 (295)
Q Consensus 94 ~~~l~~~~~~l-----~---~----~~~~~lv~~G~~~G~~~~~~a~~~p----~~v~~lil~~~p~~~ 146 (295)
++-+.+.++.+ + . .+.++++ |||||++.+..++.+| +.|.-++..++|...
T Consensus 156 tEYV~dAIk~ILslYr~~~e~~~p~P~sVILV--GHSMGGiVAra~~tlkn~~~~sVntIITlssPH~a 222 (973)
T KOG3724|consen 156 TEYVNDAIKYILSLYRGEREYASPLPHSVILV--GHSMGGIVARATLTLKNEVQGSVNTIITLSSPHAA 222 (973)
T ss_pred HHHHHHHHHHHHHHhhcccccCCCCCceEEEE--eccchhHHHHHHHhhhhhccchhhhhhhhcCcccC
Confidence 44444444432 1 0 1225666 8888877666666555 455555666676543
No 184
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=89.30 E-value=9.5 Score=30.47 Aligned_cols=118 Identities=18% Similarity=0.211 Sum_probs=63.3
Q ss_pred EEcCCCCCCCceEEEEcCCCCCCccc----hhhH----HHhh------hCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHH
Q 022534 26 RETGSADSRLGTIVFLHGAPSHSYSY----RNVM----SQMS------DAGFHCFAPDWLGFGFSDKPEKGYDDFDFTEN 91 (295)
Q Consensus 26 ~~~g~~~~~~~~vv~lHG~~~~~~~w----~~~~----~~l~------~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~ 91 (295)
...|+.+...-+.+++.|.+.+.... .... +.+. ..+=+|-.+-|.||=.=........... .-+
T Consensus 10 va~GD~d~A~~Vav~VPG~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vAvV~WlgYdaP~~~~~~a~~~~-~A~ 88 (177)
T PF06259_consen 10 VAVGDPDTADHVAVLVPGTGTTLDSFLGGMDDEARALRAAAARAARAAGPGGSVAVVAWLGYDAPAGGLPDAASPG-YAR 88 (177)
T ss_pred EEECCcCCcCeeEEEcCCCCCCcccccchhHHHHHHHHHHHHHHHHhhcCCCCeEEEEEcCCCCCCCccccccCch-HHH
Confidence 34587766566899999987655431 1111 1111 1122454555555432110000000001 123
Q ss_pred HHHHHHHHHHHHhCCCC----ceEEEEecccchHHHHHHHHhC-cCccceeEEEcCCCCC
Q 022534 92 EFHEELDKLLDVLEVKY----PFFLVVQGFLVGSYGLTWALKN-PSRISKLAILNSPLTA 146 (295)
Q Consensus 92 ~~~~~l~~~~~~l~~~~----~~~lv~~G~~~G~~~~~~a~~~-p~~v~~lil~~~p~~~ 146 (295)
.-+..|..|++.|.-.. .+.++ |||-||.....|++. +..+..++++.||-..
T Consensus 89 ~ga~~L~~f~~gl~a~~~~~~~~tv~--GHSYGS~v~G~A~~~~~~~vddvv~~GSPG~g 146 (177)
T PF06259_consen 89 AGAPRLARFLDGLRATHGPDAHLTVV--GHSYGSTVVGLAAQQGGLRVDDVVLVGSPGMG 146 (177)
T ss_pred HHHHHHHHHHHHhhhhcCCCCCEEEE--EecchhHHHHHHhhhCCCCcccEEEECCCCCC
Confidence 45667777777664322 34555 778888767777765 7789999999887543
No 185
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=89.15 E-value=7.1 Score=33.25 Aligned_cols=99 Identities=15% Similarity=0.208 Sum_probs=54.3
Q ss_pred ceEEEEcCCCCCCcc--chhhHHHhhhC-CCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC----CCC
Q 022534 36 GTIVFLHGAPSHSYS--YRNVMSQMSDA-GFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLE----VKY 108 (295)
Q Consensus 36 ~~vv~lHG~~~~~~~--w~~~~~~l~~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~----~~~ 108 (295)
-|+|++||.+.+..+ ...+.+.+.+. |.-|++.|. |-| -. . ++..... +.+..+++++. +.+
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g--~~--~---s~l~pl~---~Qv~~~ce~v~~m~~lsq 92 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDG--IK--D---SSLMPLW---EQVDVACEKVKQMPELSQ 92 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCC--cc--h---hhhccHH---HHHHHHHHHHhcchhccC
Confidence 489999999865554 55666555532 678888885 444 11 0 1111223 34444444443 223
Q ss_pred ceEEEEecccchHH-HHHHHHhCc-CccceeEEEcCCCCCC
Q 022534 109 PFFLVVQGFLVGSY-GLTWALKNP-SRISKLAILNSPLTAS 147 (295)
Q Consensus 109 ~~~lv~~G~~~G~~-~~~~a~~~p-~~v~~lil~~~p~~~~ 147 (295)
-+.++ |.|=|++ +-.++..-+ ..|+.+|-+++|....
T Consensus 93 Gyniv--g~SQGglv~Raliq~cd~ppV~n~ISL~gPhaG~ 131 (296)
T KOG2541|consen 93 GYNIV--GYSQGGLVARALIQFCDNPPVKNFISLGGPHAGI 131 (296)
T ss_pred ceEEE--EEccccHHHHHHHHhCCCCCcceeEeccCCcCCc
Confidence 35555 6665554 333333322 2688999888876543
No 186
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=89.11 E-value=1.4 Score=36.94 Aligned_cols=38 Identities=26% Similarity=0.571 Sum_probs=27.3
Q ss_pred CCceEEEEcCCC-CC-C-ccchhhHHHhhhCCCeEEEeCCC
Q 022534 34 RLGTIVFLHGAP-SH-S-YSYRNVMSQMSDAGFHCFAPDWL 71 (295)
Q Consensus 34 ~~~~vv~lHG~~-~~-~-~~w~~~~~~l~~~~~~via~Dl~ 71 (295)
++.+|=|+-|.. ++ . -.|+.+++.|+++||.|+|.=..
T Consensus 16 P~gvihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~ 56 (250)
T PF07082_consen 16 PKGVIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYV 56 (250)
T ss_pred CCEEEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecC
Confidence 455777777742 22 2 35889999999999999986553
No 187
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=88.59 E-value=6.7 Score=32.21 Aligned_cols=105 Identities=14% Similarity=0.221 Sum_probs=53.1
Q ss_pred CceEEEEcCCCC-CCccch------------hhHHHhh---hCCCeEEEeCCC---CCCCC-CCCCCCCCCCCCCHHHHH
Q 022534 35 LGTIVFLHGAPS-HSYSYR------------NVMSQMS---DAGFHCFAPDWL---GFGFS-DKPEKGYDDFDFTENEFH 94 (295)
Q Consensus 35 ~~~vv~lHG~~~-~~~~w~------------~~~~~l~---~~~~~via~Dl~---G~G~S-~~~~~~~~~~~~~~~~~~ 94 (295)
+.-+|+|||-|- -.+.|- .++++.. +.||.|+...-- -+-.+ +.|.... .-.++...
T Consensus 101 ~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyi---rt~veh~~ 177 (297)
T KOG3967|consen 101 QKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYI---RTPVEHAK 177 (297)
T ss_pred cceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhc---cchHHHHH
Confidence 347999999762 334442 2233322 358999887543 11111 1111110 10122222
Q ss_pred HHHHHHHHHhCCCCceEEEEecccchHHHHHHHHhCcC--ccceeEEEcCCC
Q 022534 95 EELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPS--RISKLAILNSPL 144 (295)
Q Consensus 95 ~~l~~~~~~l~~~~~~~lv~~G~~~G~~~~~~a~~~p~--~v~~lil~~~p~ 144 (295)
-....++.....+ .+++++|.. ||+..+.+..++|+ +|.++.+.++++
T Consensus 178 yvw~~~v~pa~~~-sv~vvahsy-GG~~t~~l~~~f~~d~~v~aialTDs~~ 227 (297)
T KOG3967|consen 178 YVWKNIVLPAKAE-SVFVVAHSY-GGSLTLDLVERFPDDESVFAIALTDSAM 227 (297)
T ss_pred HHHHHHhcccCcc-eEEEEEecc-CChhHHHHHHhcCCccceEEEEeecccc
Confidence 2223333333334 366776643 66766777777775 677777777764
No 188
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=88.29 E-value=3.9 Score=33.84 Aligned_cols=90 Identities=19% Similarity=0.323 Sum_probs=55.1
Q ss_pred eEEEEcCCCCCC--ccch-hhHHHhhhCCCeEEEeCCC----CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC--
Q 022534 37 TIVFLHGAPSHS--YSYR-NVMSQMSDAGFHCFAPDWL----GFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVK-- 107 (295)
Q Consensus 37 ~vv~lHG~~~~~--~~w~-~~~~~l~~~~~~via~Dl~----G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~-- 107 (295)
.|||+-|.+..- ..|. .+..+|.+.++..+-+-++ |+|-+ ++++=++|+.+++++++..
T Consensus 38 ~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~G~Gt~------------slk~D~edl~~l~~Hi~~~~f 105 (299)
T KOG4840|consen 38 KVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYNGYGTF------------SLKDDVEDLKCLLEHIQLCGF 105 (299)
T ss_pred EEEEEcccCCCccccccHHHHHHHHhhccceeeeeeccccccccccc------------cccccHHHHHHHHHHhhccCc
Confidence 689999987643 3343 4455566668888888776 33322 4455568999999987543
Q ss_pred -CceEEEEecccchHHHHHHHH---hCcCccceeEEE
Q 022534 108 -YPFFLVVQGFLVGSYGLTWAL---KNPSRISKLAIL 140 (295)
Q Consensus 108 -~~~~lv~~G~~~G~~~~~~a~---~~p~~v~~lil~ 140 (295)
..++|+ |||.|+=-+.+-+ .-|..|..-|+.
T Consensus 106 St~vVL~--GhSTGcQdi~yYlTnt~~~r~iraaIlq 140 (299)
T KOG4840|consen 106 STDVVLV--GHSTGCQDIMYYLTNTTKDRKIRAAILQ 140 (299)
T ss_pred ccceEEE--ecCccchHHHHHHHhccchHHHHHHHHh
Confidence 246666 7888873222212 244456555544
No 189
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=86.57 E-value=10 Score=32.83 Aligned_cols=106 Identities=13% Similarity=0.227 Sum_probs=67.8
Q ss_pred CceEEEEcCCCCCC-ccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEEE
Q 022534 35 LGTIVFLHGAPSHS-YSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLV 113 (295)
Q Consensus 35 ~~~vv~lHG~~~~~-~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv 113 (295)
.|.||++--.+++. ..-+..++.|.. ...|+.-|+.--- --|.. .-.+.++||++-+.+++..+|-+-.++-|
T Consensus 103 dPkvLivapmsGH~aTLLR~TV~alLp-~~~vyitDW~dAr--~Vp~~---~G~FdldDYIdyvie~~~~~Gp~~hv~aV 176 (415)
T COG4553 103 DPKVLIVAPMSGHYATLLRGTVEALLP-YHDVYITDWVDAR--MVPLE---AGHFDLDDYIDYVIEMINFLGPDAHVMAV 176 (415)
T ss_pred CCeEEEEecccccHHHHHHHHHHHhcc-ccceeEeeccccc--eeecc---cCCccHHHHHHHHHHHHHHhCCCCcEEEE
Confidence 45677776666654 456677777765 5789999997221 11221 12456799999999999999976433333
Q ss_pred Eecc--cchHHHHHHHHhCcCccceeEEEcCCCCC
Q 022534 114 VQGF--LVGSYGLTWALKNPSRISKLAILNSPLTA 146 (295)
Q Consensus 114 ~~G~--~~G~~~~~~a~~~p~~v~~lil~~~p~~~ 146 (295)
++-. ..++++++-+...|..-.+.+++++|.+.
T Consensus 177 CQP~vPvLAAisLM~~~~~p~~PssMtlmGgPIDa 211 (415)
T COG4553 177 CQPTVPVLAAISLMEEDGDPNVPSSMTLMGGPIDA 211 (415)
T ss_pred ecCCchHHHHHHHHHhcCCCCCCceeeeecCcccc
Confidence 3321 12334444455678777889999888764
No 190
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=85.05 E-value=0.97 Score=39.20 Aligned_cols=43 Identities=19% Similarity=0.262 Sum_probs=36.9
Q ss_pred CCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCC
Q 022534 34 RLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFS 76 (295)
Q Consensus 34 ~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S 76 (295)
+-|.+||-||.+++-..|..+--.|+.+||-|.|+.+|-+-.+
T Consensus 117 k~PvvvFSHGLggsRt~YSa~c~~LAShG~VVaavEHRD~SA~ 159 (399)
T KOG3847|consen 117 KYPVVVFSHGLGGSRTLYSAYCTSLASHGFVVAAVEHRDRSAC 159 (399)
T ss_pred CccEEEEecccccchhhHHHHhhhHhhCceEEEEeecccCcce
Confidence 3489999999999999999888889989999999999855433
No 191
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=83.84 E-value=17 Score=33.51 Aligned_cols=99 Identities=21% Similarity=0.184 Sum_probs=52.0
Q ss_pred eEEeC---cEEEEEEEcC--CCCCCCceEEEEcCCCCCCccchh---hHHH--------------------hhhCCCeEE
Q 022534 15 YIKSG---EYRWFVRETG--SADSRLGTIVFLHGAPSHSYSYRN---VMSQ--------------------MSDAGFHCF 66 (295)
Q Consensus 15 ~~~~~---~~~~~~~~~g--~~~~~~~~vv~lHG~~~~~~~w~~---~~~~--------------------l~~~~~~vi 66 (295)
|++++ +..+||.... ......|.|+++-|+|+++..+-. .-+. |.+ ...++
T Consensus 41 y~~v~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~-~anll 119 (433)
T PLN03016 41 YIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTK-MANII 119 (433)
T ss_pred EEEecCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhh-cCcEE
Confidence 45553 3445554432 222346899999999887764321 1111 222 47899
Q ss_pred EeC-CCCCCCCCCCCCCCCCCCC-CHHHHHHHHHHHHHHhC--CCCceEEEE
Q 022534 67 APD-WLGFGFSDKPEKGYDDFDF-TENEFHEELDKLLDVLE--VKYPFFLVV 114 (295)
Q Consensus 67 a~D-l~G~G~S~~~~~~~~~~~~-~~~~~~~~l~~~~~~l~--~~~~~~lv~ 114 (295)
.+| -.|.|.|-.........+. ..+++...+..|+++.. .+.++++.|
T Consensus 120 fiDqPvGtGfSy~~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~G 171 (433)
T PLN03016 120 FLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVG 171 (433)
T ss_pred EecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEc
Confidence 999 5688988643221101010 11244455555555432 245677774
No 192
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=83.16 E-value=3.6 Score=39.15 Aligned_cols=91 Identities=9% Similarity=0.178 Sum_probs=49.0
Q ss_pred ccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---CCCCceEEEEecccchHH-HH
Q 022534 49 YSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVL---EVKYPFFLVVQGFLVGSY-GL 124 (295)
Q Consensus 49 ~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l---~~~~~~~lv~~G~~~G~~-~~ 124 (295)
+.|..+++.|++.||. --|+.|...==+.... . ...-++|...+..+++.. +-+++++|| |||+|+. ..
T Consensus 156 ~vw~kLIe~L~~iGY~--~~nL~gAPYDWRls~~--~-le~rd~YF~rLK~lIE~ay~~nggkKVVLV--~HSMGglv~l 228 (642)
T PLN02517 156 FVWAVLIANLARIGYE--EKNMYMAAYDWRLSFQ--N-TEVRDQTLSRLKSNIELMVATNGGKKVVVV--PHSMGVLYFL 228 (642)
T ss_pred eeHHHHHHHHHHcCCC--CCceeecccccccCcc--c-hhhhhHHHHHHHHHHHHHHHHcCCCeEEEE--EeCCchHHHH
Confidence 4679999999987886 2333332211010000 0 001245666666666643 334567777 7788864 33
Q ss_pred HHHHhC-----------c----CccceeEEEcCCCCC
Q 022534 125 TWALKN-----------P----SRISKLAILNSPLTA 146 (295)
Q Consensus 125 ~~a~~~-----------p----~~v~~lil~~~p~~~ 146 (295)
.+...- + ..|++.|.+++|+..
T Consensus 229 yFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~lG 265 (642)
T PLN02517 229 HFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPFLG 265 (642)
T ss_pred HHHHhccccccccCCcchHHHHHHHHHheecccccCC
Confidence 322110 1 247888888777653
No 193
>KOG3101 consensus Esterase D [General function prediction only]
Probab=80.97 E-value=1.4 Score=36.09 Aligned_cols=106 Identities=23% Similarity=0.361 Sum_probs=56.8
Q ss_pred CceEEEEcCCCCCCccchh---hHHHhhhCCCeEEEeCCCCCC-----CCCC-------------CCCCCCCCCCCHHHH
Q 022534 35 LGTIVFLHGAPSHSYSYRN---VMSQMSDAGFHCFAPDWLGFG-----FSDK-------------PEKGYDDFDFTENEF 93 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~~w~~---~~~~l~~~~~~via~Dl~G~G-----~S~~-------------~~~~~~~~~~~~~~~ 93 (295)
-|++.+|-|..+....+-. +...-++.|+-|++||--=-| .++. ....+ ..+|.+=+|
T Consensus 44 ~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt~epw-~~~yrMYdY 122 (283)
T KOG3101|consen 44 CPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNATQEPW-AKHYRMYDY 122 (283)
T ss_pred CceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEEecccchH-hhhhhHHHH
Confidence 4788889999988776531 222233568999999964333 1211 11111 112333222
Q ss_pred -HHHHHHHHHHhC----CCCceEEEEecccchHHH-HHHHHhCcCccceeEEEcCCCC
Q 022534 94 -HEELDKLLDVLE----VKYPFFLVVQGFLVGSYG-LTWALKNPSRISKLAILNSPLT 145 (295)
Q Consensus 94 -~~~l~~~~~~l~----~~~~~~lv~~G~~~G~~~-~~~a~~~p~~v~~lil~~~p~~ 145 (295)
.+.+-+++..-+ ..+ +-+. |||||+.| +..+++.|.+.+++-.. +|..
T Consensus 123 v~kELp~~l~~~~~pld~~k-~~If--GHSMGGhGAl~~~Lkn~~kykSvSAF-API~ 176 (283)
T KOG3101|consen 123 VVKELPQLLNSANVPLDPLK-VGIF--GHSMGGHGALTIYLKNPSKYKSVSAF-APIC 176 (283)
T ss_pred HHHHHHHHhccccccccchh-ccee--ccccCCCceEEEEEcCcccccceecc-cccc
Confidence 234444443211 122 2333 88887654 45567999998888766 3444
No 194
>PLN02209 serine carboxypeptidase
Probab=80.15 E-value=46 Score=30.83 Aligned_cols=67 Identities=21% Similarity=0.218 Sum_probs=40.2
Q ss_pred cceeeEEeC---cEEEEEEEcC--CCCCCCceEEEEcCCCCCCccchhhHH-----------------------HhhhCC
Q 022534 11 EYGSYIKSG---EYRWFVRETG--SADSRLGTIVFLHGAPSHSYSYRNVMS-----------------------QMSDAG 62 (295)
Q Consensus 11 ~~~~~~~~~---~~~~~~~~~g--~~~~~~~~vv~lHG~~~~~~~w~~~~~-----------------------~l~~~~ 62 (295)
-+.-+++++ +..++|.... ......|.++++-|+|+++..+..+.+ -|.+ .
T Consensus 39 ~~sGy~~v~~~~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~-~ 117 (437)
T PLN02209 39 LETGYIGIGEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTK-T 117 (437)
T ss_pred EEEEEEEecCCCCeEEEEEEEecCCCCCCCCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchhh-c
Confidence 344456664 3445554433 222336899999999988776633221 1222 4
Q ss_pred CeEEEeC-CCCCCCCCC
Q 022534 63 FHCFAPD-WLGFGFSDK 78 (295)
Q Consensus 63 ~~via~D-l~G~G~S~~ 78 (295)
..++.+| -.|.|.|-.
T Consensus 118 anllfiDqPvGtGfSy~ 134 (437)
T PLN02209 118 ANIIFLDQPVGSGFSYS 134 (437)
T ss_pred CcEEEecCCCCCCccCC
Confidence 6899999 458888854
No 195
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=78.88 E-value=5.3 Score=30.74 Aligned_cols=51 Identities=16% Similarity=0.208 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHhC---CCCceEEEEecccch-HHHHHHHHhCc----CccceeEEEcCCCC
Q 022534 93 FHEELDKLLDVLE---VKYPFFLVVQGFLVG-SYGLTWALKNP----SRISKLAILNSPLT 145 (295)
Q Consensus 93 ~~~~l~~~~~~l~---~~~~~~lv~~G~~~G-~~~~~~a~~~p----~~v~~lil~~~p~~ 145 (295)
..+.+...++... -+..++++ |||+| ++|...+...+ ..+..++.+++|..
T Consensus 10 ~~~~i~~~~~~~~~~~p~~~i~v~--GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~ 68 (153)
T cd00741 10 LANLVLPLLKSALAQYPDYKIHVT--GHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRV 68 (153)
T ss_pred HHHHHHHHHHHHHHHCCCCeEEEE--EcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCcc
Confidence 4445555554432 12335555 77765 57666665443 35566777766543
No 196
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=77.69 E-value=4.1 Score=32.92 Aligned_cols=61 Identities=21% Similarity=0.369 Sum_probs=43.4
Q ss_pred CCcEEEEEeCCCCCCCcch---HHHHHhcCCC-CeEEEEecCCCCCCCCC---ChHHHHHHHHHHHHh
Q 022534 233 DKPVLVAWGISDKYLPQSV---AEEFQKGNPN-VVKLQMIEGAGHMPQED---WPEKVVDGLRYFFLN 293 (295)
Q Consensus 233 ~~P~l~i~G~~D~~~~~~~---~~~~~~~~~~-~~~~~~i~~~gH~~~~e---~p~~~~~~i~~fl~~ 293 (295)
++++|-|-|+.|.|+.+-. +..+..-+|. ...-++.+||||.-..- +.+++.=.|++|+..
T Consensus 134 ~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~ 201 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQ 201 (202)
T ss_pred cceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHh
Confidence 5788889999999986543 3444444553 23568889999975433 467888888888864
No 197
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=77.21 E-value=17 Score=33.79 Aligned_cols=30 Identities=27% Similarity=0.405 Sum_probs=24.4
Q ss_pred eEEEEecCCCCCCCCCChHHHHHHHHHHHHh
Q 022534 263 VKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 263 ~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (295)
..+.++ .+|||+..++|+...+.+..|+..
T Consensus 461 ~~~r~y-~aGHMvp~d~P~~~~~~~~~~~~~ 490 (498)
T COG2939 461 TFLRIY-EAGHMVPYDRPESSLEMVNLWING 490 (498)
T ss_pred eEEEEe-cCcceeecCChHHHHHHHHHHHhh
Confidence 344455 689999999999999999988764
No 198
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=76.66 E-value=7.7 Score=37.11 Aligned_cols=109 Identities=15% Similarity=0.093 Sum_probs=60.5
Q ss_pred CCceEEEEcCCC-CCC-ccchhhHHHhhhCCCeEEEeCCCCCCCCCCCC---CCCCCCCCCHHHHHHHHHHHHHHhCCCC
Q 022534 34 RLGTIVFLHGAP-SHS-YSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPE---KGYDDFDFTENEFHEELDKLLDVLEVKY 108 (295)
Q Consensus 34 ~~~~vv~lHG~~-~~~-~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~---~~~~~~~~~~~~~~~~l~~~~~~l~~~~ 108 (295)
.+|-+|..||.- .+. -+|+.----|.++|.-....|.||=|.=...- .......=+++|+..-..-++++ |..+
T Consensus 469 ~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve~-gyt~ 547 (712)
T KOG2237|consen 469 SKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVEN-GYTQ 547 (712)
T ss_pred CCceEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccccchhhccchhhhcccHHHHHHHHHHHHHc-CCCC
Confidence 467777777753 333 24553333344578777888999977554311 11101111455665555555544 4555
Q ss_pred ceEEEEecccchH-HHHHHHHhCcCccceeEEEcCCC
Q 022534 109 PFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNSPL 144 (295)
Q Consensus 109 ~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~~p~ 144 (295)
|-.|.+.|.|.|+ +....+-.+|+.+..+|+ ..|.
T Consensus 548 ~~kL~i~G~SaGGlLvga~iN~rPdLF~avia-~Vpf 583 (712)
T KOG2237|consen 548 PSKLAIEGGSAGGLLVGACINQRPDLFGAVIA-KVPF 583 (712)
T ss_pred ccceeEecccCccchhHHHhccCchHhhhhhh-cCcc
Confidence 5556666666654 344444589999886654 3444
No 199
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=76.12 E-value=25 Score=28.99 Aligned_cols=36 Identities=22% Similarity=0.316 Sum_probs=25.9
Q ss_pred EEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCC
Q 022534 237 LVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQ 276 (295)
Q Consensus 237 l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~ 276 (295)
..+-|++|.|.|++..+.+-+.. +++..+ +++|++.
T Consensus 169 ~aiIg~~D~IFpp~nQ~~~W~~~---~~~~~~-~~~Hy~F 204 (213)
T PF04301_consen 169 KAIIGKKDRIFPPENQKRAWQGR---CTIVEI-DAPHYPF 204 (213)
T ss_pred EEEEcCCCEEeCHHHHHHHHhCc---CcEEEe-cCCCcCc
Confidence 57899999999988666554422 356666 5899873
No 200
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=72.40 E-value=10 Score=32.29 Aligned_cols=56 Identities=16% Similarity=0.223 Sum_probs=47.0
Q ss_pred EEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCC-CCCChHHHHHHHHHHHHh
Q 022534 236 VLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMP-QEDWPEKVVDGLRYFFLN 293 (295)
Q Consensus 236 ~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~-~~e~p~~~~~~i~~fl~~ 293 (295)
+.++.+++|..++......+.+.-|+ +++..++ .||.. .+-+-|.|-.+|.+-|..
T Consensus 309 ~ivv~A~~D~Yipr~gv~~lQ~~WPg-~eVr~~e-gGHVsayl~k~dlfRR~I~d~L~R 365 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRTGVRSLQEIWPG-CEVRYLE-GGHVSAYLFKQDLFRRAIVDGLDR 365 (371)
T ss_pred EEEEEecCCccccccCcHHHHHhCCC-CEEEEee-cCceeeeehhchHHHHHHHHHHHh
Confidence 46778999999999888999999997 8999998 79964 677888898888877754
No 201
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=71.60 E-value=15 Score=27.59 Aligned_cols=53 Identities=15% Similarity=0.407 Sum_probs=30.6
Q ss_pred EEeCcEEEEEEEcC---CCC---CCCceEEEEcC--CCCCC-----------ccc-----------hhhHHHhhhCCCeE
Q 022534 16 IKSGEYRWFVRETG---SAD---SRLGTIVFLHG--APSHS-----------YSY-----------RNVMSQMSDAGFHC 65 (295)
Q Consensus 16 ~~~~~~~~~~~~~g---~~~---~~~~~vv~lHG--~~~~~-----------~~w-----------~~~~~~l~~~~~~v 65 (295)
++--|.++..+..+ .|+ +.-..++|+|| |-+++ .-| +..+..|.+.|++|
T Consensus 32 L~~~G~rfR~~~~~lpGkPDiVl~~y~~viFvHGCFWh~H~c~~a~vPksnt~fWleKi~kNveRD~r~~~~L~~~Gwrv 111 (150)
T COG3727 32 LTGQGLRFRVQDKDLPGKPDIVLPKYRCVIFVHGCFWHGHHCYLAKVPKSNTEFWLEKIGKNVERDERDIKRLQQLGWRV 111 (150)
T ss_pred HhhcceEEEecCCCCCCCCCEeecCceEEEEEeeeeccCCccccccCCCcchHHHHHHHhhhhhhhHHHHHHHHHcCCeE
Confidence 34457777777654 222 12347999999 33333 113 23455677778887
Q ss_pred EEe
Q 022534 66 FAP 68 (295)
Q Consensus 66 ia~ 68 (295)
+..
T Consensus 112 lvV 114 (150)
T COG3727 112 LVV 114 (150)
T ss_pred EEE
Confidence 654
No 202
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=70.25 E-value=23 Score=25.30 Aligned_cols=83 Identities=18% Similarity=0.149 Sum_probs=48.5
Q ss_pred cchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEEEEecccch---HHHHHH
Q 022534 50 SYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVG---SYGLTW 126 (295)
Q Consensus 50 ~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G---~~~~~~ 126 (295)
.|..+.+.+...+|--=.+.|+.+|.+-...-.. . ..+.=...|..+++..- +.+++|| |-|+- .+-..+
T Consensus 12 ly~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~~~-~---~~~~K~~~i~~i~~~fP-~~kfiLI--GDsgq~DpeiY~~i 84 (100)
T PF09949_consen 12 LYPFLRDFLRRNGFPAGPLLLRDYGPSLSGLFKS-G---AEEHKRDNIERILRDFP-ERKFILI--GDSGQHDPEIYAEI 84 (100)
T ss_pred HHHHHHHHHHhcCCCCCceEcccCCccccccccC-C---chhHHHHHHHHHHHHCC-CCcEEEE--eeCCCcCHHHHHHH
Confidence 4556666676656777777888786664321100 0 00111345666666654 4568888 44442 233567
Q ss_pred HHhCcCccceeEE
Q 022534 127 ALKNPSRISKLAI 139 (295)
Q Consensus 127 a~~~p~~v~~lil 139 (295)
|.++|++|.++.+
T Consensus 85 a~~~P~~i~ai~I 97 (100)
T PF09949_consen 85 ARRFPGRILAIYI 97 (100)
T ss_pred HHHCCCCEEEEEE
Confidence 8899999987754
No 203
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=70.06 E-value=12 Score=32.34 Aligned_cols=29 Identities=24% Similarity=0.306 Sum_probs=19.0
Q ss_pred cccch-HHHHHHHHhCcCccceeEEEcCCCC
Q 022534 116 GFLVG-SYGLTWALKNPSRISKLAILNSPLT 145 (295)
Q Consensus 116 G~~~G-~~~~~~a~~~p~~v~~lil~~~p~~ 145 (295)
|-|.| ..++..++.+|+++-.+ +..||..
T Consensus 183 G~SlGG~vsL~agl~~Pe~FG~V-~s~Sps~ 212 (299)
T COG2382 183 GDSLGGLVSLYAGLRHPERFGHV-LSQSGSF 212 (299)
T ss_pred ccccccHHHHHHHhcCchhhcee-eccCCcc
Confidence 55654 55666678999998655 4445553
No 204
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=69.97 E-value=22 Score=32.37 Aligned_cols=104 Identities=11% Similarity=0.168 Sum_probs=65.0
Q ss_pred CceEEEEcCCCCCCccc-hhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC--CCCceE
Q 022534 35 LGTIVFLHGAPSHSYSY-RNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLE--VKYPFF 111 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~~w-~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~--~~~~~~ 111 (295)
+|+|+..-|.+-+..-+ .+....|. + .-+.+.+|=||.|.....++ .+ .++++-+.|...+++++. ...+.
T Consensus 63 rPtV~~T~GY~~~~~p~r~Ept~Lld--~-NQl~vEhRfF~~SrP~p~DW-~~-Lti~QAA~D~Hri~~A~K~iY~~kW- 136 (448)
T PF05576_consen 63 RPTVLYTEGYNVSTSPRRSEPTQLLD--G-NQLSVEHRFFGPSRPEPADW-SY-LTIWQAASDQHRIVQAFKPIYPGKW- 136 (448)
T ss_pred CCeEEEecCcccccCccccchhHhhc--c-ceEEEEEeeccCCCCCCCCc-cc-ccHhHhhHHHHHHHHHHHhhccCCc-
Confidence 56788888887654323 34333342 3 56688999999998654455 22 378888999999988873 12333
Q ss_pred EEEecccchHH-HHHHHHhCcCccceeEEEcCCCC
Q 022534 112 LVVQGFLVGSY-GLTWALKNPSRISKLAILNSPLT 145 (295)
Q Consensus 112 lv~~G~~~G~~-~~~~a~~~p~~v~~lil~~~p~~ 145 (295)
|..|.|=|++ ++.+-..||+.|++.|--.+|..
T Consensus 137 -ISTG~SKGGmTa~y~rrFyP~DVD~tVaYVAP~~ 170 (448)
T PF05576_consen 137 -ISTGGSKGGMTAVYYRRFYPDDVDGTVAYVAPND 170 (448)
T ss_pred -eecCcCCCceeEEEEeeeCCCCCCeeeeeecccc
Confidence 2234343322 33334469999998886556754
No 205
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=69.21 E-value=16 Score=33.12 Aligned_cols=58 Identities=19% Similarity=0.407 Sum_probs=42.0
Q ss_pred hhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC--CC-CceEEEEecccchH
Q 022534 52 RNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLE--VK-YPFFLVVQGFLVGS 121 (295)
Q Consensus 52 ~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~--~~-~~~~lv~~G~~~G~ 121 (295)
+.+.+.|.++|+.|+-+|-.=|=+|++ +.+..+.|+..+++... ++ +.++|+ |+|-|+
T Consensus 277 k~v~~~l~~~gvpVvGvdsLRYfW~~r----------tPe~~a~Dl~r~i~~y~~~w~~~~~~li--GySfGA 337 (456)
T COG3946 277 KEVAEALQKQGVPVVGVDSLRYFWSER----------TPEQIAADLSRLIRFYARRWGAKRVLLI--GYSFGA 337 (456)
T ss_pred HHHHHHHHHCCCceeeeehhhhhhccC----------CHHHHHHHHHHHHHHHHHhhCcceEEEE--eecccc
Confidence 467788988999999999776767765 34678888888888653 22 346665 777664
No 206
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=67.99 E-value=8.9 Score=35.83 Aligned_cols=61 Identities=18% Similarity=0.277 Sum_probs=45.7
Q ss_pred CCcEEEEEeCCCCCCCcchHHHHHhc----CC-------CCeEEEEecCCCCCCCC--CChHHHHHHHHHHHHh
Q 022534 233 DKPVLVAWGISDKYLPQSVAEEFQKG----NP-------NVVKLQMIEGAGHMPQE--DWPEKVVDGLRYFFLN 293 (295)
Q Consensus 233 ~~P~l~i~G~~D~~~~~~~~~~~~~~----~~-------~~~~~~~i~~~gH~~~~--e~p~~~~~~i~~fl~~ 293 (295)
.-.+++.||-.|+++++..+..++++ .+ +-.++..+||.+|+.-- ..+-....+|.+|+|+
T Consensus 353 GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~ 426 (474)
T PF07519_consen 353 GGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVEN 426 (474)
T ss_pred CCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhC
Confidence 36899999999999988877665443 22 12489999999998633 3455678999999985
No 207
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=67.23 E-value=6 Score=35.28 Aligned_cols=45 Identities=16% Similarity=0.217 Sum_probs=40.6
Q ss_pred CCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCC
Q 022534 231 SWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMP 275 (295)
Q Consensus 231 ~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~ 275 (295)
++.+|-+++.|..|....+..+..++..+|..+-+..+||..|..
T Consensus 327 RLalpKyivnaSgDdff~pDsa~lYyd~LPG~kaLrmvPN~~H~~ 371 (507)
T COG4287 327 RLALPKYIVNASGDDFFVPDSANLYYDDLPGEKALRMVPNDPHNL 371 (507)
T ss_pred hccccceeecccCCcccCCCccceeeccCCCceeeeeCCCCcchh
Confidence 678999999999999998888888899999888899999999974
No 208
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=66.22 E-value=17 Score=27.13 Aligned_cols=33 Identities=18% Similarity=0.355 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHhCCCCceEEEEecccc-hHHHHHHHH
Q 022534 93 FHEELDKLLDVLEVKYPFFLVVQGFLV-GSYGLTWAL 128 (295)
Q Consensus 93 ~~~~l~~~~~~l~~~~~~~lv~~G~~~-G~~~~~~a~ 128 (295)
..+.+.+++++.. +..+++ .|||. |++|..+++
T Consensus 50 ~~~~l~~~~~~~~-~~~i~i--tGHSLGGalA~l~a~ 83 (140)
T PF01764_consen 50 ILDALKELVEKYP-DYSIVI--TGHSLGGALASLAAA 83 (140)
T ss_dssp HHHHHHHHHHHST-TSEEEE--EEETHHHHHHHHHHH
T ss_pred HHHHHHHHHhccc-Cccchh--hccchHHHHHHHHHH
Confidence 3455555544443 233444 47765 466655544
No 209
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=66.14 E-value=31 Score=32.76 Aligned_cols=104 Identities=12% Similarity=0.102 Sum_probs=48.7
Q ss_pred CceEEEEcCCC---CCCccchhhH--HHhhhCCCeEEEeCCC----CCCCCCCCCCCCCCCCCCHHHHHHHHH---HHHH
Q 022534 35 LGTIVFLHGAP---SHSYSYRNVM--SQMSDAGFHCFAPDWL----GFGFSDKPEKGYDDFDFTENEFHEELD---KLLD 102 (295)
Q Consensus 35 ~~~vv~lHG~~---~~~~~w~~~~--~~l~~~~~~via~Dl~----G~G~S~~~~~~~~~~~~~~~~~~~~l~---~~~~ 102 (295)
.|++|++||.+ ++..++.... ..+..++.=|+++-.| ||.-+..... .-++.+.|+...+. +-|.
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~---~gN~gl~Dq~~AL~wv~~~I~ 188 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAA---PGNLGLFDQLLALRWVKDNIP 188 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCC---CCcccHHHHHHHHHHHHHHHH
Confidence 58999999975 3333342222 1222223446666655 3333321111 11344555544444 3444
Q ss_pred HhC-CCCceEEEEecccchHHHHHHHHhC---cCccceeEEEcCC
Q 022534 103 VLE-VKYPFFLVVQGFLVGSYGLTWALKN---PSRISKLAILNSP 143 (295)
Q Consensus 103 ~l~-~~~~~~lv~~G~~~G~~~~~~a~~~---p~~v~~lil~~~p 143 (295)
..| -.+.+.++ |||.|+....+...- ...+.+.|.++..
T Consensus 189 ~FGGdp~~vTl~--G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~ 231 (545)
T KOG1516|consen 189 SFGGDPKNVTLF--GHSAGAASVSLLTLSPHSRGLFHKAISMSGN 231 (545)
T ss_pred hcCCCCCeEEEE--eechhHHHHHHHhcCHhhHHHHHHHHhhccc
Confidence 444 23457777 666664322222211 1455666655443
No 210
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=61.03 E-value=83 Score=29.29 Aligned_cols=66 Identities=20% Similarity=0.195 Sum_probs=38.5
Q ss_pred ceeeEEeC---cEEEEEEEcCC--CCCCCceEEEEcCCCCCCccc---hhhHHH---------------hhhCCCeEEEe
Q 022534 12 YGSYIKSG---EYRWFVRETGS--ADSRLGTIVFLHGAPSHSYSY---RNVMSQ---------------MSDAGFHCFAP 68 (295)
Q Consensus 12 ~~~~~~~~---~~~~~~~~~g~--~~~~~~~vv~lHG~~~~~~~w---~~~~~~---------------l~~~~~~via~ 68 (295)
++=+++++ +..+||...-. ....+|.||+|-|+|+.+..- .++=|. +.+ --.++.+
T Consensus 45 ysGYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~G~~~E~GPf~v~~~G~tL~~N~ySWnk-~aNiLfL 123 (454)
T KOG1282|consen 45 YSGYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLGGLFEENGPFRVKYNGKTLYLNPYSWNK-EANILFL 123 (454)
T ss_pred ccceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchhhhhhhcCCeEEcCCCCcceeCCccccc-cccEEEE
Confidence 44466666 67777754432 222368999999998766432 111111 111 2468888
Q ss_pred CCC-CCCCCCC
Q 022534 69 DWL-GFGFSDK 78 (295)
Q Consensus 69 Dl~-G~G~S~~ 78 (295)
|+| |=|.|=.
T Consensus 124 d~PvGvGFSYs 134 (454)
T KOG1282|consen 124 DQPVGVGFSYS 134 (454)
T ss_pred ecCCcCCcccc
Confidence 887 6777753
No 211
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=58.87 E-value=3.5 Score=37.06 Aligned_cols=85 Identities=18% Similarity=0.148 Sum_probs=46.6
Q ss_pred eEEEEcCCCC-CCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEEEEe
Q 022534 37 TIVFLHGAPS-HSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQ 115 (295)
Q Consensus 37 ~vv~lHG~~~-~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~ 115 (295)
-+|+.||.-+ +...|...+..... .+-=.....+|+=..-.... ++.++-=...++++.+.+....+++ +-.+
T Consensus 82 LvVlthGi~~~~~~~~~~~~~~~~k-k~p~~~iv~~g~~~~~~~T~--~Gv~~lG~Rla~~~~e~~~~~si~k-ISfv-- 155 (405)
T KOG4372|consen 82 LVVLTHGLHGADMEYWKEKIEQMTK-KMPDKLIVVRGKMNNMCQTF--DGVDVLGERLAEEVKETLYDYSIEK-ISFV-- 155 (405)
T ss_pred EEEeccccccccHHHHHHHHHhhhc-CCCcceEeeeccccchhhcc--ccceeeecccHHHHhhhhhccccce-eeee--
Confidence 5899999765 67788888877754 23322444455443332211 1112212345666666655555665 3344
Q ss_pred cccchHHHHHHH
Q 022534 116 GFLVGSYGLTWA 127 (295)
Q Consensus 116 G~~~G~~~~~~a 127 (295)
|||.|++...+|
T Consensus 156 ghSLGGLvar~A 167 (405)
T KOG4372|consen 156 GHSLGGLVARYA 167 (405)
T ss_pred eeecCCeeeeEE
Confidence 777776544444
No 212
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=56.93 E-value=25 Score=28.86 Aligned_cols=64 Identities=22% Similarity=0.305 Sum_probs=34.6
Q ss_pred HHhhhCCCeEEEeCCCCCCCCCCC-C--C-CCCCCCCCHHHHHHHHHHHHHHhCCCCceEEEEecccchHH
Q 022534 56 SQMSDAGFHCFAPDWLGFGFSDKP-E--K-GYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSY 122 (295)
Q Consensus 56 ~~l~~~~~~via~Dl~G~G~S~~~-~--~-~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G~~ 122 (295)
..+++ -.+|+||=.|--...... . . .....+....|..+....++++.+-.+|++|+ |||=|+.
T Consensus 40 s~F~~-~~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n~GRPfILa--GHSQGs~ 107 (207)
T PF11288_consen 40 SAFNG-VCNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYNNGRPFILA--GHSQGSM 107 (207)
T ss_pred hhhhc-CCccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcCCCCCEEEE--EeChHHH
Confidence 33444 468888876643322211 0 0 00001112245556666677777778899887 7777764
No 213
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=56.80 E-value=1.4e+02 Score=27.26 Aligned_cols=59 Identities=14% Similarity=0.175 Sum_probs=33.2
Q ss_pred chhhHHHhhhCCCeEEEeCCCCC---CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEEEEec
Q 022534 51 YRNVMSQMSDAGFHCFAPDWLGF---GFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQG 116 (295)
Q Consensus 51 w~~~~~~l~~~~~~via~Dl~G~---G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G 116 (295)
....+..|.+.|+.|+-|+ +|+ |....-. .-..++....+...+..-.++...+||.+|
T Consensus 135 ~~~Nl~~L~~~G~~ii~P~-~g~la~~~~g~gr------~~~~~~I~~~~~~~~~~~~l~gk~vlITgG 196 (399)
T PRK05579 135 TQRNLATLRSRGVEIIGPA-SGRLACGDVGPGR------MAEPEEIVAAAERALSPKDLAGKRVLITAG 196 (399)
T ss_pred HHHHHHHHHHCCCEEECCC-CccccCCCcCCCC------CCCHHHHHHHHHHHhhhcccCCCEEEEeCC
Confidence 4577788888898887443 444 3333211 124566666666665443445445666555
No 214
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=56.77 E-value=6.5 Score=31.58 Aligned_cols=34 Identities=18% Similarity=0.470 Sum_probs=25.4
Q ss_pred ceEEEEcC---CCCCCccchhhHHHhhhCCCeEEEeC
Q 022534 36 GTIVFLHG---APSHSYSYRNVMSQMSDAGFHCFAPD 69 (295)
Q Consensus 36 ~~vv~lHG---~~~~~~~w~~~~~~l~~~~~~via~D 69 (295)
+.||++|. ...+......+++.|.++||+++.++
T Consensus 152 g~Iil~Hd~~~~~~t~~~l~~~i~~l~~~Gy~~vtl~ 188 (191)
T TIGR02764 152 GDIILLHASDSAKQTVKALPTIIKKLKEKGYEFVTIS 188 (191)
T ss_pred CCEEEEeCCCCcHhHHHHHHHHHHHHHHCCCEEEEHH
Confidence 46999994 22344556788899988999998875
No 215
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=56.25 E-value=12 Score=30.90 Aligned_cols=36 Identities=14% Similarity=0.146 Sum_probs=23.1
Q ss_pred CceEEEEcCCCCCCccchh----hHHHhhhCCCeEEEeCCC
Q 022534 35 LGTIVFLHGAPSHSYSYRN----VMSQMSDAGFHCFAPDWL 71 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~~w~~----~~~~l~~~~~~via~Dl~ 71 (295)
++.|||||||-.|...|.. +-..|.+. +.++.+|=|
T Consensus 5 k~rvLcLHGfrQsg~~F~~Ktg~~rK~l~k~-~el~f~~aP 44 (230)
T KOG2551|consen 5 KLRVLCLHGFRQSGKVFSEKTGSLRKLLKKL-AELVFPDAP 44 (230)
T ss_pred CceEEEecchhhccHHHHHHhhhHHHHHHhh-heEEecCCC
Confidence 5689999999877655542 22334333 667777766
No 216
>KOG2872 consensus Uroporphyrinogen decarboxylase [Coenzyme transport and metabolism]
Probab=56.22 E-value=45 Score=28.82 Aligned_cols=74 Identities=12% Similarity=0.297 Sum_probs=45.2
Q ss_pred CceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCC----------CCCCCCCCCCCCCCCCC-CHHHHHHHHHHHHHH
Q 022534 35 LGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWL----------GFGFSDKPEKGYDDFDF-TENEFHEELDKLLDV 103 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~----------G~G~S~~~~~~~~~~~~-~~~~~~~~l~~~~~~ 103 (295)
-|.|+|.-|.+. .++.|+..||.|+-.|+- |---|-.-.-+ .++.| +.+.+.+.+.++++.
T Consensus 252 vPmi~fakG~g~-------~Le~l~~tG~DVvgLDWTvdp~ear~~~g~~VtlQGNlD-P~~ly~s~e~it~~v~~mv~~ 323 (359)
T KOG2872|consen 252 VPMILFAKGSGG-------ALEELAQTGYDVVGLDWTVDPAEARRRVGNRVTLQGNLD-PGVLYGSKEEITQLVKQMVKD 323 (359)
T ss_pred CceEEEEcCcch-------HHHHHHhcCCcEEeecccccHHHHHHhhCCceEEecCCC-hHHhcCCHHHHHHHHHHHHHH
Confidence 367888887653 356788889999999973 11111100001 13355 567788899999999
Q ss_pred hCCCCceEEEEec
Q 022534 104 LEVKYPFFLVVQG 116 (295)
Q Consensus 104 l~~~~~~~lv~~G 116 (295)
.|-++-+.-+|||
T Consensus 324 fG~~ryI~NLGHG 336 (359)
T KOG2872|consen 324 FGKSRYIANLGHG 336 (359)
T ss_pred hCccceEEecCCC
Confidence 9855533333343
No 217
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=56.02 E-value=23 Score=32.74 Aligned_cols=85 Identities=13% Similarity=0.297 Sum_probs=45.6
Q ss_pred ccchhhHHHhhhCCCe------EEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---hCCCCceEEEEecccc
Q 022534 49 YSYRNVMSQMSDAGFH------CFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDV---LEVKYPFFLVVQGFLV 119 (295)
Q Consensus 49 ~~w~~~~~~l~~~~~~------via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~---l~~~~~~~lv~~G~~~ 119 (295)
+.|..+++.|..=||. -..+|+|= +. .... ..+.|...++..++. ++-.+|++|| +|||
T Consensus 124 ~~w~~~i~~lv~~GYe~~~~l~ga~YDwRl-s~--~~~e-------~rd~yl~kLK~~iE~~~~~~G~kkVvli--sHSM 191 (473)
T KOG2369|consen 124 WYWHELIENLVGIGYERGKTLFGAPYDWRL-SY--HNSE-------ERDQYLSKLKKKIETMYKLNGGKKVVLI--SHSM 191 (473)
T ss_pred HHHHHHHHHHHhhCcccCceeeccccchhh-cc--CChh-------HHHHHHHHHHHHHHHHHHHcCCCceEEE--ecCC
Confidence 3678888888754555 34556651 10 0000 124566666666664 3333568787 7788
Q ss_pred hHH-HHHHHHhCcC--------ccceeEEEcCCCC
Q 022534 120 GSY-GLTWALKNPS--------RISKLAILNSPLT 145 (295)
Q Consensus 120 G~~-~~~~a~~~p~--------~v~~lil~~~p~~ 145 (295)
|+. ..-+...+++ .+++.+-+++|+.
T Consensus 192 G~l~~lyFl~w~~~~~~~W~~k~I~sfvnig~p~l 226 (473)
T KOG2369|consen 192 GGLYVLYFLKWVEAEGPAWCDKYIKSFVNIGAPWL 226 (473)
T ss_pred ccHHHHHHHhcccccchhHHHHHHHHHHccCchhc
Confidence 864 3333333333 3566665555543
No 218
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=55.70 E-value=1.1e+02 Score=29.77 Aligned_cols=122 Identities=18% Similarity=0.100 Sum_probs=60.4
Q ss_pred EEEEEEEcCCCCCCCceEEEEcCCCCCC--ccchhhHHHhhhCCCeEEEeCCCCCCCCCCCC--CC-CCCCCCCHHHHHH
Q 022534 21 YRWFVRETGSADSRLGTIVFLHGAPSHS--YSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPE--KG-YDDFDFTENEFHE 95 (295)
Q Consensus 21 ~~~~~~~~g~~~~~~~~vv~lHG~~~~~--~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~--~~-~~~~~~~~~~~~~ 95 (295)
+.+.|+.--..+.++|.+|+-=|.-+.+ -.|....--|.++||-.-.---||=|.=...- .+ .-+..=++.|+++
T Consensus 434 VSLvyrkd~~~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~GK~l~K~NTf~DFIa 513 (682)
T COG1770 434 VSLVYRKDTKLDGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDFIA 513 (682)
T ss_pred EEEEEecccCCCCCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChHHHHhhhhhhccccHHHHHH
Confidence 3444543212223456777777754433 23554333455678765555567655443210 00 0000114556666
Q ss_pred HHHHHHHHhCCCCceEEEEecccc-hHHHHHHHHhCcCccceeEEEcCCC
Q 022534 96 ELDKLLDVLEVKYPFFLVVQGFLV-GSYGLTWALKNPSRISKLAILNSPL 144 (295)
Q Consensus 96 ~l~~~~~~l~~~~~~~lv~~G~~~-G~~~~~~a~~~p~~v~~lil~~~p~ 144 (295)
....+++. +...+--+++.|.|. |.+...++-..|+.++++|.- .|+
T Consensus 514 ~a~~Lv~~-g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~-VPF 561 (682)
T COG1770 514 AARHLVKE-GYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQ-VPF 561 (682)
T ss_pred HHHHHHHc-CcCCccceEEeccCchhHHHHHHHhhChhhhhheeec-CCc
Confidence 66666554 332221223334454 455455566899999877653 554
No 219
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=54.29 E-value=33 Score=30.64 Aligned_cols=38 Identities=18% Similarity=0.441 Sum_probs=25.3
Q ss_pred CCceEEEEecccchHHHHHHHH----hC--cCccceeEEEcCCCCC
Q 022534 107 KYPFFLVVQGFLVGSYGLTWAL----KN--PSRISKLAILNSPLTA 146 (295)
Q Consensus 107 ~~~~~lv~~G~~~G~~~~~~a~----~~--p~~v~~lil~~~p~~~ 146 (295)
++|+.|| |||+|+-.+..|+ +. -..|+.++++++|...
T Consensus 219 ~RpVtLv--G~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~ 262 (345)
T PF05277_consen 219 ERPVTLV--GHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPS 262 (345)
T ss_pred CCceEEE--eecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCC
Confidence 4689998 7788875443332 22 2358889999887654
No 220
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=53.96 E-value=1.7e+02 Score=26.30 Aligned_cols=61 Identities=18% Similarity=0.197 Sum_probs=47.3
Q ss_pred CCcEEEEEeCCCCCCCcchHHHHHhc---CCCCeEEEEecCCCCCCCC-CChHHHHHHHHHHHHh
Q 022534 233 DKPVLVAWGISDKYLPQSVAEEFQKG---NPNVVKLQMIEGAGHMPQE-DWPEKVVDGLRYFFLN 293 (295)
Q Consensus 233 ~~P~l~i~G~~D~~~~~~~~~~~~~~---~~~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~ 293 (295)
..+.+.+.++.|.+++....+++.+. ....++.+-+.++-|..+. ..|....+...+|++.
T Consensus 225 ~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~~ 289 (350)
T KOG2521|consen 225 PWNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFRSFPKTYLKKCSEFLRS 289 (350)
T ss_pred cccceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeeccCcHHHHHHHHHHHHh
Confidence 57888899999999999888887332 2223567788899998765 4699999999998865
No 221
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=53.62 E-value=1.2e+02 Score=27.66 Aligned_cols=60 Identities=15% Similarity=0.276 Sum_probs=31.1
Q ss_pred cchhhHHHhhhCCCeEEEeCCCCC---CCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-hCCCCceEEEEec
Q 022534 50 SYRNVMSQMSDAGFHCFAPDWLGF---GFSDKPEKGYDDFDFTENEFHEELDKLLDV-LEVKYPFFLVVQG 116 (295)
Q Consensus 50 ~w~~~~~~l~~~~~~via~Dl~G~---G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~-l~~~~~~~lv~~G 116 (295)
.....+..|.+.|+.|+-|. +|+ |....-. .-+.++....+...+.. -.++.+.++|.+|
T Consensus 130 ~~~~Nl~~L~~~G~~vv~P~-~g~~ac~~~g~g~------~~~~~~i~~~v~~~~~~~~~~~~~~vlit~g 193 (390)
T TIGR00521 130 AVQENIKRLKDDGYIFIEPD-SGLLACGDEGKGR------LAEPETIVKAAEREFSPKEDLEGKRVLITAG 193 (390)
T ss_pred HHHHHHHHHHHCCcEEECCC-CcccccccccCCC------CCCHHHHHHHHHHHHhhccccCCceEEEecC
Confidence 34677788887787765444 332 3333211 11445666666666543 1233344555444
No 222
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=51.77 E-value=18 Score=32.94 Aligned_cols=56 Identities=16% Similarity=0.192 Sum_probs=36.6
Q ss_pred CCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCCCCC-----ChHHHHHHHHHHH
Q 022534 233 DKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQED-----WPEKVVDGLRYFF 291 (295)
Q Consensus 233 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e-----~p~~~~~~i~~fl 291 (295)
.--+|+|+|+.|++.-.. -.+.+- .++..+.+.||..|...+. +.++..+.|++|-
T Consensus 351 ~~rmlFVYG~nDPW~A~~--f~l~~g-~~ds~v~~~PggnHga~I~~L~~~~r~~a~a~l~~Wa 411 (448)
T PF05576_consen 351 GPRMLFVYGENDPWSAEP--FRLGKG-KRDSYVFTAPGGNHGARIAGLPEAERAEATARLRRWA 411 (448)
T ss_pred CCeEEEEeCCCCCcccCc--cccCCC-CcceEEEEcCCCcccccccCCCHHHHHHHHHHHHHHc
Confidence 356899999999975321 122221 2346889999999976543 3456677777774
No 223
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=50.79 E-value=43 Score=28.93 Aligned_cols=50 Identities=18% Similarity=0.153 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHhCCCCceEEEEecccchHHHHHHHHhCcCccceeEEE
Q 022534 91 NEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRISKLAIL 140 (295)
Q Consensus 91 ~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G~~~~~~a~~~p~~v~~lil~ 140 (295)
+....-+..++++++++.--.|+=.|+.+|+++..+|.+|-.+|.++++.
T Consensus 55 eAQ~~k~~~~~~kl~L~~G~~lLDiGCGWG~l~~~aA~~y~v~V~GvTlS 104 (283)
T COG2230 55 EAQRAKLDLILEKLGLKPGMTLLDIGCGWGGLAIYAAEEYGVTVVGVTLS 104 (283)
T ss_pred HHHHHHHHHHHHhcCCCCCCEEEEeCCChhHHHHHHHHHcCCEEEEeeCC
Confidence 45667788888999886433444337667888777777887788877764
No 224
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=50.20 E-value=12 Score=30.96 Aligned_cols=35 Identities=17% Similarity=0.423 Sum_probs=27.3
Q ss_pred ceEEEEcCC-CCCCccchhhHHHhhhCCCeEEEeCC
Q 022534 36 GTIVFLHGA-PSHSYSYRNVMSQMSDAGFHCFAPDW 70 (295)
Q Consensus 36 ~~vv~lHG~-~~~~~~w~~~~~~l~~~~~~via~Dl 70 (295)
+.||++|.. ..+......+++.|.++||+++.++.
T Consensus 187 g~IiLlHd~~~~t~~aL~~ii~~lk~~Gy~fvtl~e 222 (224)
T TIGR02884 187 GAILLLHAVSKDNAEALDKIIKDLKEQGYTFKSLDD 222 (224)
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEhHH
Confidence 479999985 34455677889999889999988753
No 225
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=50.03 E-value=34 Score=29.21 Aligned_cols=46 Identities=15% Similarity=0.343 Sum_probs=28.0
Q ss_pred HHHHHHHHHH-hCCC-CceEEEEecccchH-HHHHHHHhCcCccceeEEEc
Q 022534 94 HEELDKLLDV-LEVK-YPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILN 141 (295)
Q Consensus 94 ~~~l~~~~~~-l~~~-~~~~lv~~G~~~G~-~~~~~a~~~p~~v~~lil~~ 141 (295)
.+.+.-++++ ..++ .+..++ |||.|+ +++...+++|+.+....+++
T Consensus 121 ~~~lkP~Ie~~y~~~~~~~~i~--GhSlGGLfvl~aLL~~p~~F~~y~~~S 169 (264)
T COG2819 121 TEQLKPFIEARYRTNSERTAII--GHSLGGLFVLFALLTYPDCFGRYGLIS 169 (264)
T ss_pred HHhhHHHHhcccccCcccceee--eecchhHHHHHHHhcCcchhceeeeec
Confidence 3444455554 2232 124455 777765 45555678999999888774
No 226
>COG0218 Predicted GTPase [General function prediction only]
Probab=49.95 E-value=15 Score=29.90 Aligned_cols=16 Identities=25% Similarity=0.544 Sum_probs=13.3
Q ss_pred EEEeCCCCCCCCCCCC
Q 022534 65 CFAPDWLGFGFSDKPE 80 (295)
Q Consensus 65 via~Dl~G~G~S~~~~ 80 (295)
+...|+||||....+.
T Consensus 72 ~~lVDlPGYGyAkv~k 87 (200)
T COG0218 72 LRLVDLPGYGYAKVPK 87 (200)
T ss_pred EEEEeCCCcccccCCH
Confidence 7788999999988643
No 227
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=47.34 E-value=43 Score=27.56 Aligned_cols=30 Identities=20% Similarity=0.329 Sum_probs=15.8
Q ss_pred ecccch-HHHHHHHHh----C-cCccceeEEEcCCCC
Q 022534 115 QGFLVG-SYGLTWALK----N-PSRISKLAILNSPLT 145 (295)
Q Consensus 115 ~G~~~G-~~~~~~a~~----~-p~~v~~lil~~~p~~ 145 (295)
.|||+| ++|..+++. . +..+. ++..++|..
T Consensus 133 tGHSLGGaiA~l~a~~l~~~~~~~~i~-~~tFg~P~v 168 (229)
T cd00519 133 TGHSLGGALASLLALDLRLRGPGSDVT-VYTFGQPRV 168 (229)
T ss_pred EccCHHHHHHHHHHHHHHhhCCCCceE-EEEeCCCCC
Confidence 478765 566555442 2 33444 555666554
No 228
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=47.33 E-value=15 Score=31.53 Aligned_cols=34 Identities=15% Similarity=0.377 Sum_probs=27.8
Q ss_pred ceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeC
Q 022534 36 GTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPD 69 (295)
Q Consensus 36 ~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~D 69 (295)
..||++|....+......+++.|.++||+++.++
T Consensus 231 G~IILmHd~~~T~~aL~~iI~~Lk~kGy~fvtl~ 264 (268)
T TIGR02873 231 GAMVLMHPTASSTEGLEEMITIIKEKGYKIGTIT 264 (268)
T ss_pred CcEEEEcCCccHHHHHHHHHHHHHHCCCEEEeHH
Confidence 4689999876666667888899998999998875
No 229
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=46.31 E-value=26 Score=26.30 Aligned_cols=27 Identities=11% Similarity=0.267 Sum_probs=19.1
Q ss_pred CCCCceEEEEcCCCCCCccch--hhHHHh
Q 022534 32 DSRLGTIVFLHGAPSHSYSYR--NVMSQM 58 (295)
Q Consensus 32 ~~~~~~vv~lHG~~~~~~~w~--~~~~~l 58 (295)
.+.+|-|+-+||+++....|- .+++.|
T Consensus 49 ~p~KpLVlSfHG~tGtGKn~v~~liA~~l 77 (127)
T PF06309_consen 49 NPRKPLVLSFHGWTGTGKNFVSRLIAEHL 77 (127)
T ss_pred CCCCCEEEEeecCCCCcHHHHHHHHHHHH
Confidence 345677888999999998874 344443
No 230
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=44.85 E-value=90 Score=27.42 Aligned_cols=59 Identities=24% Similarity=0.199 Sum_probs=30.1
Q ss_pred CeEEEeCCC-CCCCCCCCCCCCCCCC-CCHHHHHHHHHHHHHHhC--CCCceEEEEecccchHH
Q 022534 63 FHCFAPDWL-GFGFSDKPEKGYDDFD-FTENEFHEELDKLLDVLE--VKYPFFLVVQGFLVGSY 122 (295)
Q Consensus 63 ~~via~Dl~-G~G~S~~~~~~~~~~~-~~~~~~~~~l~~~~~~l~--~~~~~~lv~~G~~~G~~ 122 (295)
..++.+|+| |-|.|-...+.....+ -..+++...|..|+++.. .+++++|.|-++ +|.+
T Consensus 2 aNvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESY-aG~Y 64 (319)
T PLN02213 2 ANIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSY-SGMI 64 (319)
T ss_pred ccEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeecc-ccch
Confidence 368999999 8998864322110000 011334444555554432 245788874332 4444
No 231
>PLN02310 triacylglycerol lipase
Probab=44.73 E-value=75 Score=29.03 Aligned_cols=51 Identities=16% Similarity=0.296 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHhC---CCCceEEEEecccc-hHHHHHHHH----hCcCccceeEEEcCCCC
Q 022534 93 FHEELDKLLDVLE---VKYPFFLVVQGFLV-GSYGLTWAL----KNPSRISKLAILNSPLT 145 (295)
Q Consensus 93 ~~~~l~~~~~~l~---~~~~~~lv~~G~~~-G~~~~~~a~----~~p~~v~~lil~~~p~~ 145 (295)
..+.|..+++... .+..+++ .|||+ |++|...|. ..|..-..++..++|-.
T Consensus 191 Vl~eV~~L~~~y~~~~e~~sI~v--TGHSLGGALAtLaA~dl~~~~~~~~v~vyTFGsPRV 249 (405)
T PLN02310 191 VMQEVKRLVNFYRGKGEEVSLTV--TGHSLGGALALLNAYEAATTIPDLFVSVISFGAPRV 249 (405)
T ss_pred HHHHHHHHHHhhcccCCcceEEE--EcccHHHHHHHHHHHHHHHhCcCcceeEEEecCCCc
Confidence 4455566665542 1222444 47865 467665543 24443234666677654
No 232
>PLN02454 triacylglycerol lipase
Probab=43.12 E-value=75 Score=29.12 Aligned_cols=14 Identities=29% Similarity=0.328 Sum_probs=8.6
Q ss_pred ecccch-HHHHHHHH
Q 022534 115 QGFLVG-SYGLTWAL 128 (295)
Q Consensus 115 ~G~~~G-~~~~~~a~ 128 (295)
.|||+| ++|...|.
T Consensus 233 TGHSLGGALAtLaA~ 247 (414)
T PLN02454 233 TGHSLGASLATLAAF 247 (414)
T ss_pred EecCHHHHHHHHHHH
Confidence 478765 67666553
No 233
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=42.91 E-value=40 Score=30.96 Aligned_cols=48 Identities=17% Similarity=0.248 Sum_probs=26.1
Q ss_pred CcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEecCCCCCC-----CCCChHHHHH
Q 022534 234 KPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMP-----QEDWPEKVVD 285 (295)
Q Consensus 234 ~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~-----~~e~p~~~~~ 285 (295)
--++++.|+.||+.... ..+........++|||++|+. ..+.|+++.+
T Consensus 377 tnviFtNG~~DPW~~lg----v~~~~~~~~~~~~I~g~~Hc~Dl~~~~~~D~~~l~~ 429 (434)
T PF05577_consen 377 TNVIFTNGELDPWRALG----VTSDSSDSVPAIVIPGGAHCSDLYPPNPNDPPELKA 429 (434)
T ss_dssp -SEEEEEETT-CCGGGS------S-SSSSEEEEEETT--TTGGGS---TT--HHHHH
T ss_pred CeEEeeCCCCCCccccc----CCCCCCCCcccEEECCCeeeccccCCCCCCCHHHHH
Confidence 47899999999986544 222233345678999999964 2234555543
No 234
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=42.38 E-value=40 Score=27.06 Aligned_cols=35 Identities=17% Similarity=0.436 Sum_probs=26.8
Q ss_pred CceEEEEcCCCCCCcc--chhhHHHhhhCCCeEEEeC
Q 022534 35 LGTIVFLHGAPSHSYS--YRNVMSQMSDAGFHCFAPD 69 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~~--w~~~~~~l~~~~~~via~D 69 (295)
++.+|++-|.+++..+ =..+.+.|.+.|++++..|
T Consensus 22 ~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LD 58 (197)
T COG0529 22 KGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLD 58 (197)
T ss_pred CCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEec
Confidence 5689999999887765 2344455667899999998
No 235
>PLN02408 phospholipase A1
Probab=40.97 E-value=60 Score=29.23 Aligned_cols=35 Identities=26% Similarity=0.412 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHHH
Q 022534 93 FHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWAL 128 (295)
Q Consensus 93 ~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a~ 128 (295)
..+.|..+++...-. +.-++..|||.| ++|...|.
T Consensus 184 Vl~eI~~ll~~y~~~-~~sI~vTGHSLGGALAtLaA~ 219 (365)
T PLN02408 184 VREEIARLLQSYGDE-PLSLTITGHSLGAALATLTAY 219 (365)
T ss_pred HHHHHHHHHHhcCCC-CceEEEeccchHHHHHHHHHH
Confidence 345555666554322 222333488764 67655443
No 236
>PLN02571 triacylglycerol lipase
Probab=40.15 E-value=52 Score=30.10 Aligned_cols=36 Identities=14% Similarity=0.290 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHHhCCC-CceEEEEecccch-HHHHHHHH
Q 022534 91 NEFHEELDKLLDVLEVK-YPFFLVVQGFLVG-SYGLTWAL 128 (295)
Q Consensus 91 ~~~~~~l~~~~~~l~~~-~~~~lv~~G~~~G-~~~~~~a~ 128 (295)
+++.++|..+++...-. ..+++. |||+| ++|...|.
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VT--GHSLGGALAtLaA~ 245 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITIC--GHSLGAALATLNAV 245 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEe--ccchHHHHHHHHHH
Confidence 34556677777665322 134443 88765 67665554
No 237
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=40.13 E-value=67 Score=26.70 Aligned_cols=48 Identities=21% Similarity=0.209 Sum_probs=27.9
Q ss_pred HHHHHHHHHhCCCCceEEEEecccc-hHHHHHHHHh----CcCccceeEEEcCCCCC
Q 022534 95 EELDKLLDVLEVKYPFFLVVQGFLV-GSYGLTWALK----NPSRISKLAILNSPLTA 146 (295)
Q Consensus 95 ~~l~~~~~~l~~~~~~~lv~~G~~~-G~~~~~~a~~----~p~~v~~lil~~~p~~~ 146 (295)
+-+..+++.. ++++.+. |||. |.+|...|+. ..++|.++...++|-..
T Consensus 73 ~yl~~~~~~~--~~~i~v~--GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPGf~ 125 (224)
T PF11187_consen 73 AYLKKIAKKY--PGKIYVT--GHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPGFS 125 (224)
T ss_pred HHHHHHHHhC--CCCEEEE--EechhhHHHHHHHHHccHHHhhheeEEEEeeCCCCC
Confidence 3344444443 3345554 7765 5566554443 45688888888877543
No 238
>PLN02162 triacylglycerol lipase
Probab=39.84 E-value=79 Score=29.43 Aligned_cols=50 Identities=12% Similarity=0.252 Sum_probs=24.9
Q ss_pred HHHHHHHHHHhCCCCceEEEEecccc-hHHHHHHHH---hC-----cCccceeEEEcCCCCC
Q 022534 94 HEELDKLLDVLEVKYPFFLVVQGFLV-GSYGLTWAL---KN-----PSRISKLAILNSPLTA 146 (295)
Q Consensus 94 ~~~l~~~~~~l~~~~~~~lv~~G~~~-G~~~~~~a~---~~-----p~~v~~lil~~~p~~~ 146 (295)
.+.+.+++++.. +.++++ .|||. |++|...|. .. .+++.++...++|-..
T Consensus 265 ~~~L~~lL~k~p-~~kliV--TGHSLGGALAtLaAa~L~~~~~~~l~~~~~~vYTFGqPRVG 323 (475)
T PLN02162 265 RQMLRDKLARNK-NLKYIL--TGHSLGGALAALFPAILAIHGEDELLDKLEGIYTFGQPRVG 323 (475)
T ss_pred HHHHHHHHHhCC-CceEEE--EecChHHHHHHHHHHHHHHccccccccccceEEEeCCCCcc
Confidence 344444544432 223444 47765 567665432 11 2234567777776543
No 239
>PF03610 EIIA-man: PTS system fructose IIA component; InterPro: IPR004701 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) [, ] is a major carbohydrate transport system in bacteria. The PTS catalyses the phosphorylation of incoming sugar substrates and coupled with translocation across the cell membrane, makes the PTS a link between the uptake and metabolism of sugars. The general mechanism of the PTS is the following: a phosphoryl group from phosphoenolpyruvate (PEP) is transferred via a signal transduction pathway, to enzyme I (EI) which in turn transfers it to a phosphoryl carrier, the histidine protein (HPr). Phospho-HPr then transfers the phosphoryl group to a sugar-specific permease, a membrane-bound complex known as enzyme 2 (EII), which transports the sugar to the cell. EII consists of at least three structurally distinct domains IIA, IIB and IIC []. These can either be fused together in a single polypeptide chain or exist as two or three interactive chains, formerly called enzymes II (EII) and III (EIII). The first domain (IIA or EIIA) carries the first permease-specific phosphorylation site, a histidine which is phosphorylated by phospho-HPr. The second domain (IIB or EIIB) is phosphorylated by phospho-IIA on a cysteinyl or histidyl residue, depending on the sugar transported. Finally, the phosphoryl group is transferred from the IIB domain to the sugar substrate concomitantly with the sugar uptake processed by the IIC domain. This third domain (IIC or EIIC) forms the translocation channel and the specific substrate-binding site. An additional transmembrane domain IID, homologous to IIC, can be found in some PTSs, e.g. for mannose [, , , ]. The Man family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of Escherichia coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for IIA and IIB components.; GO: 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane; PDB: 3GDW_B 2JZN_A 1VSQ_A 2JZO_B 1VRC_A 1PDO_A 3GX1_A 3B48_B 3BED_B 3IPR_C ....
Probab=37.03 E-value=1.1e+02 Score=22.11 Aligned_cols=61 Identities=18% Similarity=0.198 Sum_probs=39.2
Q ss_pred eEEEEcCCCCCCccchhhHHHhhhC-CCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEEE
Q 022534 37 TIVFLHGAPSHSYSYRNVMSQMSDA-GFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLV 113 (295)
Q Consensus 37 ~vv~lHG~~~~~~~w~~~~~~l~~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv 113 (295)
.||.-|| .-+......++.+... --.+.++|+.- +-+++++.+.+.+.+++++-++.++++
T Consensus 2 iii~sHG--~~A~g~~~~~~~i~G~~~~~i~~~~~~~--------------~~~~~~~~~~l~~~i~~~~~~~~vlil 63 (116)
T PF03610_consen 2 IIIASHG--SLAEGLLESAEMILGEDQDNIEAVDLYP--------------DESIEDFEEKLEEAIEELDEGDGVLIL 63 (116)
T ss_dssp EEEEEET--THHHHHHHHHHHHHTSTCSSEEEEEETT--------------TSCHHHHHHHHHHHHHHCCTTSEEEEE
T ss_pred EEEEECc--HHHHHHHHHHHHHcCCCcccEEEEECcC--------------CCCHHHHHHHHHHHHHhccCCCcEEEE
Confidence 5788899 4444455666776643 23677776551 115678889999999888755545444
No 240
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=35.80 E-value=79 Score=25.15 Aligned_cols=51 Identities=12% Similarity=0.196 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHhCCCCceEEEEecccchHHHH-HHHHh------CcCccceeEEEcCCCCC
Q 022534 93 FHEELDKLLDVLEVKYPFFLVVQGFLVGSYGL-TWALK------NPSRISKLAILNSPLTA 146 (295)
Q Consensus 93 ~~~~l~~~~~~l~~~~~~~lv~~G~~~G~~~~-~~a~~------~p~~v~~lil~~~p~~~ 146 (295)
..+.|.+.....- +.+++|+ |+|-|+... .++.. ..++|.++++++.|...
T Consensus 67 ~~~~i~~~~~~CP-~~kivl~--GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~~~ 124 (179)
T PF01083_consen 67 LVRLIEEYAARCP-NTKIVLA--GYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPRRG 124 (179)
T ss_dssp HHHHHHHHHHHST-TSEEEEE--EETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TTTB
T ss_pred HHHHHHHHHHhCC-CCCEEEE--ecccccHHHHHHHHhccCChhhhhhEEEEEEecCCccc
Confidence 3444444444432 3345554 888876433 33222 34689999999877653
No 241
>TIGR02683 upstrm_HI1419 probable addiction module killer protein. Members of this strictly bacterial protein family are small, at roughly 100 amino acids. The gene is almost invariably the upstream member of a gene pair, where the downstream member is a predicted DNA-binding protein from a clade within Pfam helix-turn-helix family pfam01381. These gene pairs, when found on the bacterial chromosome, often are located with prophage regions, but also in both integrated plasmid regions and near housekeeping genes. Analysis suggests that the gene pair may serve as an addiction module.
Probab=35.22 E-value=45 Score=23.38 Aligned_cols=22 Identities=27% Similarity=0.537 Sum_probs=14.9
Q ss_pred cEEEEEEEcCCCCCCCceEEEEcCCCC
Q 022534 20 EYRWFVRETGSADSRLGTIVFLHGAPS 46 (295)
Q Consensus 20 ~~~~~~~~~g~~~~~~~~vv~lHG~~~ 46 (295)
++++.|...++ ..+|++||+.=
T Consensus 57 ~yRiif~~~~~-----~~vvll~gf~K 78 (95)
T TIGR02683 57 GYRVYFTQRGK-----VIILLLCGGDK 78 (95)
T ss_pred CEEEEEEEECC-----EEEEEEeCEec
Confidence 67777765432 27889999853
No 242
>PF03283 PAE: Pectinacetylesterase
Probab=34.64 E-value=1.1e+02 Score=27.57 Aligned_cols=51 Identities=20% Similarity=0.236 Sum_probs=27.3
Q ss_pred HHHHHHHHHHhCCCCceEEEEecccchHHHHHH-----HHhCcCccceeEEEcCCCC
Q 022534 94 HEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTW-----ALKNPSRISKLAILNSPLT 145 (295)
Q Consensus 94 ~~~l~~~~~~l~~~~~~~lv~~G~~~G~~~~~~-----a~~~p~~v~~lil~~~p~~ 145 (295)
...|+++++. +++++--++..|.|.|++|..+ +...|..++-..+.++.+.
T Consensus 141 ~avl~~l~~~-gl~~a~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~DsG~f 196 (361)
T PF03283_consen 141 RAVLDDLLSN-GLPNAKQVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCLSDSGFF 196 (361)
T ss_pred HHHHHHHHHh-cCcccceEEEeccChHHHHHHHHHHHHHHHhccCceEEEecccccc
Confidence 3445555555 4544333444577888776532 3457765554444555544
No 243
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=34.14 E-value=1e+02 Score=28.14 Aligned_cols=40 Identities=10% Similarity=0.172 Sum_probs=28.3
Q ss_pred CCceEEEEcCCCCCCcc--chhhHHHhhhCCCeEE--EeCCCCCC
Q 022534 34 RLGTIVFLHGAPSHSYS--YRNVMSQMSDAGFHCF--APDWLGFG 74 (295)
Q Consensus 34 ~~~~vv~lHG~~~~~~~--w~~~~~~l~~~~~~vi--a~Dl~G~G 74 (295)
.+..|+++-|+|++..+ .+...+.+|+ .|.|+ .+|.-|+|
T Consensus 34 ~kaIvfiI~GfG~dan~~~~d~~r~~iA~-~fnvv~I~V~YHCf~ 77 (403)
T PF11144_consen 34 IKAIVFIIPGFGADANSNYLDFMREYIAK-KFNVVVISVNYHCFC 77 (403)
T ss_pred ceEEEEEeCCcCCCcchHHHHHHHHHHHH-hCCEEEEEeeeehee
Confidence 35678889999988764 5577778886 57754 45666665
No 244
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=34.12 E-value=54 Score=27.87 Aligned_cols=43 Identities=19% Similarity=0.166 Sum_probs=24.3
Q ss_pred CCCCcEEEEEeCCCCCCCcchHHHHHhcCCCC---eEEEEecCCCCC
Q 022534 231 SWDKPVLVAWGISDKYLPQSVAEEFQKGNPNV---VKLQMIEGAGHM 274 (295)
Q Consensus 231 ~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~---~~~~~i~~~gH~ 274 (295)
++++|+|++.|-.|........+.+.+..... .++++=| -+|.
T Consensus 226 ~i~vP~l~v~Gw~D~~~~~~~~~~~~~l~~~~~~~~~Liigp-w~H~ 271 (272)
T PF02129_consen 226 KIDVPVLIVGGWYDTLFLRGALRAYEALRAPGSKPQRLIIGP-WTHG 271 (272)
T ss_dssp G--SEEEEEEETTCSSTSHHHHHHHHHHCTTSTC-EEEEEES-ESTT
T ss_pred hCCCCEEEecccCCcccchHHHHHHHHhhcCCCCCCEEEEeC-CCCC
Confidence 67999999999999666544444444433322 1444433 4553
No 245
>PF02540 NAD_synthase: NAD synthase; InterPro: IPR022310 NAD+ synthase (6.3.5.1 from EC) catalyzes the last step in the biosynthesis of nicotinamide adenine dinucleotide and is induced by stress factors such as heat shock and glucose limitation. The three-dimensional structure of NH3-dependent NAD+ synthetase from Bacillus subtilis, in its free form and in complex with ATP shows that the enzyme consists of a tight homodimer with alpha/beta subunit topology []. Catalyzes the synthesis of GMP from XMP. The protein is a homodimer, but in the archaea it is a heterodimer composed of a glutamine amidotransferase subunit (A) and a GMP-binding subunit (B). This entry contains the GMP-binding subunit (B). ; PDB: 2VXO_A 3UOW_B 3N05_A 2DPL_B 3A4I_A 3SEQ_D 3SZG_A 3SYT_A 3SDB_A 3SEZ_C ....
Probab=34.04 E-value=93 Score=26.20 Aligned_cols=45 Identities=16% Similarity=0.181 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHHhCCCCceEEEEecccch--H-HHHHHHH--hCcCccceeEE
Q 022534 91 NEFHEELDKLLDVLEVKYPFFLVVQGFLVG--S-YGLTWAL--KNPSRISKLAI 139 (295)
Q Consensus 91 ~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G--~-~~~~~a~--~~p~~v~~lil 139 (295)
+.....|.+.+++.+.++ +++ |.||| | +.+.+|. ..|++|-++++
T Consensus 3 ~~l~~~L~~~~~~~g~~~-vVv---glSGGiDSav~A~La~~Alg~~~v~~v~m 52 (242)
T PF02540_consen 3 EALVDFLRDYVKKSGAKG-VVV---GLSGGIDSAVVAALAVKALGPDNVLAVIM 52 (242)
T ss_dssp HHHHHHHHHHHHHHTTSE-EEE---EETSSHHHHHHHHHHHHHHGGGEEEEEEE
T ss_pred HHHHHHHHHHHHHhCCCe-EEE---EcCCCCCHHHHHHHHHHHhhhcccccccc
Confidence 556788888888888765 555 77887 3 3344443 34788876665
No 246
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=33.54 E-value=2.2e+02 Score=30.38 Aligned_cols=92 Identities=13% Similarity=0.227 Sum_probs=57.0
Q ss_pred CceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEEEE
Q 022534 35 LGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVV 114 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~ 114 (295)
.|++.|+|-.-+.....+.++..| .+ |-||.-.....+ ..|+++.+.--..-++++.-+.|..++
T Consensus 2123 ~~~~Ffv~pIEG~tt~l~~la~rl-----e~-----PaYglQ~T~~vP----~dSies~A~~yirqirkvQP~GPYrl~- 2187 (2376)
T KOG1202|consen 2123 EPPLFFVHPIEGFTTALESLASRL-----EI-----PAYGLQCTEAVP----LDSIESLAAYYIRQIRKVQPEGPYRLA- 2187 (2376)
T ss_pred CCceEEEeccccchHHHHHHHhhc-----CC-----cchhhhccccCC----cchHHHHHHHHHHHHHhcCCCCCeeee-
Confidence 468999998766665555444433 22 666644322211 237888888877788888777788887
Q ss_pred ecccchH-HHHHHH--HhCcCccceeEEEcC
Q 022534 115 QGFLVGS-YGLTWA--LKNPSRISKLAILNS 142 (295)
Q Consensus 115 ~G~~~G~-~~~~~a--~~~p~~v~~lil~~~ 142 (295)
|+|-|+ ++..+| +...+....+++++.
T Consensus 2188 -GYSyG~~l~f~ma~~Lqe~~~~~~lillDG 2217 (2376)
T KOG1202|consen 2188 -GYSYGACLAFEMASQLQEQQSPAPLILLDG 2217 (2376)
T ss_pred -ccchhHHHHHHHHHHHHhhcCCCcEEEecC
Confidence 787664 454443 333333445887764
No 247
>TIGR02883 spore_cwlD N-acetylmuramoyl-L-alanine amidase CwlD. Members of this protein family are the CwlD family of N-acetylmuramoyl-L-alanine amidase. This family has been called the germination-specific N-acetylmuramoyl-L-alanine amidase. CwlD is required, along with the putative deactylase PdaA, to make muramic delta-lactam, a novel peptidoglycan constituent found only in spores. CwlD mutants show a germination defect.
Probab=33.50 E-value=99 Score=24.76 Aligned_cols=13 Identities=31% Similarity=0.245 Sum_probs=10.1
Q ss_pred EEEeCCCCCCCCCC
Q 022534 65 CFAPDWLGFGFSDK 78 (295)
Q Consensus 65 via~Dl~G~G~S~~ 78 (295)
+|++| ||||.++.
T Consensus 2 ~I~iD-pGHGg~d~ 14 (189)
T TIGR02883 2 IIVID-PGHGGIDG 14 (189)
T ss_pred EEEEe-CCCCCCCC
Confidence 56677 99998874
No 248
>PLN02324 triacylglycerol lipase
Probab=33.44 E-value=87 Score=28.73 Aligned_cols=34 Identities=21% Similarity=0.335 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHhCCCCceEEEEecccch-HHHHHHH
Q 022534 93 FHEELDKLLDVLEVKYPFFLVVQGFLVG-SYGLTWA 127 (295)
Q Consensus 93 ~~~~l~~~~~~l~~~~~~~lv~~G~~~G-~~~~~~a 127 (295)
....|..++++..-.. .-+...|||.| ++|...|
T Consensus 199 Vl~eV~~L~~~Yp~e~-~sItvTGHSLGGALAtLaA 233 (415)
T PLN02324 199 VQGELKRLLELYKNEE-ISITFTGHSLGAVMSVLSA 233 (415)
T ss_pred HHHHHHHHHHHCCCCC-ceEEEecCcHHHHHHHHHH
Confidence 4455666666543221 22334588764 6766554
No 249
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=33.25 E-value=63 Score=26.07 Aligned_cols=60 Identities=15% Similarity=0.268 Sum_probs=33.3
Q ss_pred CceEEEEcCCCCCCccch---hhHHHhhhCCCe--EEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 022534 35 LGTIVFLHGAPSHSYSYR---NVMSQMSDAGFH--CFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDV 103 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~~w~---~~~~~l~~~~~~--via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~ 103 (295)
++|++++||-....-... .+...|.+.|.. ++.+.--|||.+... ...+..+.+.+|+++
T Consensus 144 ~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~---------~~~~~~~~~~~f~~~ 208 (213)
T PF00326_consen 144 KPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPE---------NRRDWYERILDFFDK 208 (213)
T ss_dssp GSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHH---------HHHHHHHHHHHHHHH
T ss_pred CCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCch---------hHHHHHHHHHHHHHH
Confidence 579999999865544333 444556555544 444444555444321 123555666666664
No 250
>PHA02114 hypothetical protein
Probab=33.20 E-value=56 Score=23.18 Aligned_cols=35 Identities=29% Similarity=0.397 Sum_probs=29.1
Q ss_pred ceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCC
Q 022534 36 GTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDW 70 (295)
Q Consensus 36 ~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl 70 (295)
++||+=-.+..+-.-|-.++..|.+.||.|++-..
T Consensus 83 gtivldvn~amsr~pwi~v~s~le~~g~~vvatqe 117 (127)
T PHA02114 83 GTIVLDVNYAMSRAPWIKVISRLEEAGFNVVATQE 117 (127)
T ss_pred CeEEEEehhhhccCcHHHHHHHHHhcCceeeehhh
Confidence 47777777888888999999999989999997543
No 251
>PLN03037 lipase class 3 family protein; Provisional
Probab=33.08 E-value=1.4e+02 Score=28.27 Aligned_cols=51 Identities=18% Similarity=0.311 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHhC---CCCceEEEEecccch-HHHHHHHH----hCcCc-cceeEEEcCCCC
Q 022534 93 FHEELDKLLDVLE---VKYPFFLVVQGFLVG-SYGLTWAL----KNPSR-ISKLAILNSPLT 145 (295)
Q Consensus 93 ~~~~l~~~~~~l~---~~~~~~lv~~G~~~G-~~~~~~a~----~~p~~-v~~lil~~~p~~ 145 (295)
...+|..+++... .+..+++ .|||+| ++|...|. ..|+. -..++..++|-.
T Consensus 300 Vl~eV~rLv~~Yk~~ge~~SItV--TGHSLGGALAtLaA~DIa~~~p~~~~VtvyTFGsPRV 359 (525)
T PLN03037 300 VMEEVKRLVNFFKDRGEEVSLTI--TGHSLGGALALLNAYEAARSVPALSNISVISFGAPRV 359 (525)
T ss_pred HHHHHHHHHHhccccCCcceEEE--eccCHHHHHHHHHHHHHHHhCCCCCCeeEEEecCCCc
Confidence 4456666666543 1222444 488765 67655543 34542 123445566644
No 252
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=32.83 E-value=17 Score=32.96 Aligned_cols=27 Identities=22% Similarity=0.288 Sum_probs=13.5
Q ss_pred cccchHHHHHHHHhCcCccceeEEEcC
Q 022534 116 GFLVGSYGLTWALKNPSRISKLAILNS 142 (295)
Q Consensus 116 G~~~G~~~~~~a~~~p~~v~~lil~~~ 142 (295)
|||-|+.++.-++....+++..|++++
T Consensus 234 GHSFGGATa~~~l~~d~r~~~~I~LD~ 260 (379)
T PF03403_consen 234 GHSFGGATALQALRQDTRFKAGILLDP 260 (379)
T ss_dssp EETHHHHHHHHHHHH-TT--EEEEES-
T ss_pred ecCchHHHHHHHHhhccCcceEEEeCC
Confidence 676554323333333478899998874
No 253
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=32.50 E-value=2.3e+02 Score=26.63 Aligned_cols=98 Identities=18% Similarity=0.264 Sum_probs=52.8
Q ss_pred CceEEEEcCCCCCCccch--hhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEE
Q 022534 35 LGTIVFLHGAPSHSYSYR--NVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFL 112 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~~w~--~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~l 112 (295)
.|-.|+.=|+=. ..-|+ .++..|.. =-.+.-|.|=-|.+=.... ..| .+...+.|.+-++.||.++. -|
T Consensus 289 PPL~VYFSGyR~-aEGFEgy~MMk~Lg~--PfLL~~DpRleGGaFYlGs----~ey-E~~I~~~I~~~L~~LgF~~~-qL 359 (511)
T TIGR03712 289 PPLNVYFSGYRP-AEGFEGYFMMKRLGA--PFLLIGDPRLEGGAFYLGS----DEY-EQGIINVIQEKLDYLGFDHD-QL 359 (511)
T ss_pred CCeEEeeccCcc-cCcchhHHHHHhcCC--CeEEeeccccccceeeeCc----HHH-HHHHHHHHHHHHHHhCCCHH-He
Confidence 355677888743 33332 34444432 1234456665554432111 012 34567778888888988742 34
Q ss_pred EEecccchHHHHH-HHHh-CcCccceeEEEcCCCC
Q 022534 113 VVQGFLVGSYGLT-WALK-NPSRISKLAILNSPLT 145 (295)
Q Consensus 113 v~~G~~~G~~~~~-~a~~-~p~~v~~lil~~~p~~ 145 (295)
|..|.|||++++. ++++ .|. ++ +++-|..
T Consensus 360 ILSGlSMGTfgAlYYga~l~P~---AI-iVgKPL~ 390 (511)
T TIGR03712 360 ILSGLSMGTFGALYYGAKLSPH---AI-IVGKPLV 390 (511)
T ss_pred eeccccccchhhhhhcccCCCc---eE-EEcCccc
Confidence 5568899998755 4443 453 34 3445554
No 254
>PLN00413 triacylglycerol lipase
Probab=32.11 E-value=1.4e+02 Score=27.85 Aligned_cols=50 Identities=16% Similarity=0.305 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHhCCCCceEEEEecccc-hHHHHHHHH---h-----CcCccceeEEEcCCCC
Q 022534 93 FHEELDKLLDVLEVKYPFFLVVQGFLV-GSYGLTWAL---K-----NPSRISKLAILNSPLT 145 (295)
Q Consensus 93 ~~~~l~~~~~~l~~~~~~~lv~~G~~~-G~~~~~~a~---~-----~p~~v~~lil~~~p~~ 145 (295)
..+.+.++++... +.++++. |||. |++|...|+ . ..+++.++...++|-.
T Consensus 270 i~~~Lk~ll~~~p-~~kliVT--GHSLGGALAtLaA~~L~~~~~~~~~~ri~~VYTFG~PRV 328 (479)
T PLN00413 270 ILRHLKEIFDQNP-TSKFILS--GHSLGGALAILFTAVLIMHDEEEMLERLEGVYTFGQPRV 328 (479)
T ss_pred HHHHHHHHHHHCC-CCeEEEE--ecCHHHHHHHHHHHHHHhccchhhccccceEEEeCCCCC
Confidence 3455666666543 3335443 7765 567655442 1 1234556677777654
No 255
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=31.63 E-value=1.6e+02 Score=23.80 Aligned_cols=72 Identities=28% Similarity=0.329 Sum_probs=39.7
Q ss_pred hHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEEEEecccchHHHHHHHHh-C-c
Q 022534 54 VMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALK-N-P 131 (295)
Q Consensus 54 ~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G~~~~~~a~~-~-p 131 (295)
.++.+..+++.++.+|-+|....+ .+....+..+++.+.... ++|+.- .+++.-.+..+.. + .
T Consensus 75 ~l~~~~~~~~D~vlIDT~Gr~~~d-------------~~~~~el~~~~~~~~~~~-~~LVls-a~~~~~~~~~~~~~~~~ 139 (196)
T PF00448_consen 75 ALEKFRKKGYDLVLIDTAGRSPRD-------------EELLEELKKLLEALNPDE-VHLVLS-ATMGQEDLEQALAFYEA 139 (196)
T ss_dssp HHHHHHHTTSSEEEEEE-SSSSTH-------------HHHHHHHHHHHHHHSSSE-EEEEEE-GGGGGHHHHHHHHHHHH
T ss_pred HHHHHhhcCCCEEEEecCCcchhh-------------HHHHHHHHHHhhhcCCcc-ceEEEe-cccChHHHHHHHHHhhc
Confidence 344455567999999999654222 356678888888775443 445432 2344322222222 1 2
Q ss_pred CccceeEEE
Q 022534 132 SRISKLAIL 140 (295)
Q Consensus 132 ~~v~~lil~ 140 (295)
-.+.++|+.
T Consensus 140 ~~~~~lIlT 148 (196)
T PF00448_consen 140 FGIDGLILT 148 (196)
T ss_dssp SSTCEEEEE
T ss_pred ccCceEEEE
Confidence 246788764
No 256
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=31.48 E-value=54 Score=30.68 Aligned_cols=61 Identities=20% Similarity=0.202 Sum_probs=38.8
Q ss_pred EeCcEEEEEEEcCC-CCCCCceEEEEcCCCCCCccchhhHHH-------------------hhhCCCeEEEeCC-CCCCC
Q 022534 17 KSGEYRWFVRETGS-ADSRLGTIVFLHGAPSHSYSYRNVMSQ-------------------MSDAGFHCFAPDW-LGFGF 75 (295)
Q Consensus 17 ~~~~~~~~~~~~g~-~~~~~~~vv~lHG~~~~~~~w~~~~~~-------------------l~~~~~~via~Dl-~G~G~ 75 (295)
++.+.-++|.--++ +..++|.++++.|+++++..|-.+.+. |.. .-.++.+|| .|-|.
T Consensus 82 d~ed~~ffy~fe~~ndp~~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~-~adLvFiDqPvGTGf 160 (498)
T COG2939 82 DAEDFFFFYTFESPNDPANRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLD-FADLVFIDQPVGTGF 160 (498)
T ss_pred ccceeEEEEEecCCCCCCCCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCcccccc-CCceEEEecCcccCc
Confidence 33444445544443 333478999999999999888665321 112 246899995 58888
Q ss_pred CCC
Q 022534 76 SDK 78 (295)
Q Consensus 76 S~~ 78 (295)
|..
T Consensus 161 S~a 163 (498)
T COG2939 161 SRA 163 (498)
T ss_pred ccc
Confidence 874
No 257
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=31.20 E-value=42 Score=28.74 Aligned_cols=37 Identities=16% Similarity=0.151 Sum_probs=28.9
Q ss_pred CceEEEEcCCCCCC--ccchhhHHHhhhCCCeEEEeCCC
Q 022534 35 LGTIVFLHGAPSHS--YSYRNVMSQMSDAGFHCFAPDWL 71 (295)
Q Consensus 35 ~~~vv~lHG~~~~~--~~w~~~~~~l~~~~~~via~Dl~ 71 (295)
.|+||++.|+-++. ..=..+...|..+|++|.++.-|
T Consensus 55 ~~vlIv~eG~DaAGKG~~I~~l~~~lDPRg~~V~s~~~P 93 (264)
T TIGR03709 55 RSLLLVLQAMDAAGKDGTIRHVMSGVNPQGCQVTSFKAP 93 (264)
T ss_pred CcEEEEEECCCCCCchHHHHHHHHhcCCCeeEEEeCCCC
Confidence 47999999986544 45678888898899999887444
No 258
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=31.19 E-value=1.7e+02 Score=23.41 Aligned_cols=29 Identities=21% Similarity=0.518 Sum_probs=22.4
Q ss_pred ecccchHH-HHHHHHhCcCccceeEEEcCC
Q 022534 115 QGFLVGSY-GLTWALKNPSRISKLAILNSP 143 (295)
Q Consensus 115 ~G~~~G~~-~~~~a~~~p~~v~~lil~~~p 143 (295)
.|.|+|++ ++.+..++|+.+.++|.++.-
T Consensus 106 sgcsmGayhA~nfvfrhP~lftkvialSGv 135 (227)
T COG4947 106 SGCSMGAYHAANFVFRHPHLFTKVIALSGV 135 (227)
T ss_pred cccchhhhhhhhhheeChhHhhhheeecce
Confidence 47788865 667778999999999987643
No 259
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=30.36 E-value=3.5e+02 Score=24.14 Aligned_cols=30 Identities=30% Similarity=0.273 Sum_probs=25.6
Q ss_pred eEEEEecCCCCCCCCCChHHHHHHHHHHHH
Q 022534 263 VKLQMIEGAGHMPQEDWPEKVVDGLRYFFL 292 (295)
Q Consensus 263 ~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 292 (295)
..+..++.+||++.-++|+.....++.+-.
T Consensus 383 l~f~wilraghmvp~Dnp~~a~hmlr~vtk 412 (414)
T KOG1283|consen 383 LSFFWILRAGHMVPADNPAAASHMLRHVTK 412 (414)
T ss_pred ceeEEeecccCcccCCCHHHHhhheeeccc
Confidence 578999999999999999998887776543
No 260
>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]
Probab=30.31 E-value=1.5e+02 Score=23.44 Aligned_cols=26 Identities=8% Similarity=0.076 Sum_probs=20.8
Q ss_pred hhHHHhhhCCCeEEEeCCCCCCCCCC
Q 022534 53 NVMSQMSDAGFHCFAPDWLGFGFSDK 78 (295)
Q Consensus 53 ~~~~~l~~~~~~via~Dl~G~G~S~~ 78 (295)
.++++|.+.+|.|..+|+----+.+.
T Consensus 18 acv~~FkannywV~siDl~eNe~Ad~ 43 (236)
T KOG4022|consen 18 ACVEFFKANNYWVLSIDLSENEQADS 43 (236)
T ss_pred HHHHHHHhcCeEEEEEeecccccccc
Confidence 56788988899999999986665553
No 261
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=30.22 E-value=81 Score=28.33 Aligned_cols=38 Identities=13% Similarity=0.161 Sum_probs=29.9
Q ss_pred EEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCC
Q 022534 38 IVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSD 77 (295)
Q Consensus 38 vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~ 77 (295)
|||+|.... ..|+++++.|.++|++|.++-+.+.+...
T Consensus 2 il~~~~~~p--~~~~~la~~L~~~G~~v~~~~~~~~~~~~ 39 (396)
T cd03818 2 ILFVHQNFP--GQFRHLAPALAAQGHEVVFLTEPNAAPPP 39 (396)
T ss_pred EEEECCCCc--hhHHHHHHHHHHCCCEEEEEecCCCCCCC
Confidence 789997532 33789999999899999998887776544
No 262
>PF05973 Gp49: Phage derived protein Gp49-like (DUF891); InterPro: IPR009241 This entry consists of several hypothetical viral and bacterial proteins some are annotated as addiction module killer proteins.
Probab=30.00 E-value=63 Score=22.25 Aligned_cols=24 Identities=33% Similarity=0.419 Sum_probs=17.1
Q ss_pred CcEEEEEEEcCCCCCCCceEEEEcCCCCC
Q 022534 19 GEYRWFVRETGSADSRLGTIVFLHGAPSH 47 (295)
Q Consensus 19 ~~~~~~~~~~g~~~~~~~~vv~lHG~~~~ 47 (295)
+.+|+.|...++. .+|++||+-=.
T Consensus 51 ~~~Ri~y~~~~~~-----~ivll~~f~Kk 74 (91)
T PF05973_consen 51 NIYRILYFFDGGD-----IIVLLHGFIKK 74 (91)
T ss_pred CcceEEEEEcCcc-----EEEEEEEEEeC
Confidence 5688888765532 79999998643
No 263
>cd00006 PTS_IIA_man PTS_IIA, PTS system, mannose/sorbose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation. IIA subunits receive phosphoryl groups from HPr and transfer them to IIB subunits, which in turn phosphorylate the substrate.
Probab=29.44 E-value=2.3e+02 Score=20.71 Aligned_cols=61 Identities=15% Similarity=0.161 Sum_probs=37.1
Q ss_pred eEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEEE
Q 022534 37 TIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLV 113 (295)
Q Consensus 37 ~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv 113 (295)
.||.-|| .-.......++.+....-.+.++|+.- +-+.+++.+.+.+.++.++.++.++++
T Consensus 3 ili~sHG--~~A~gi~~~~~~i~G~~~~i~~~~~~~--------------~~~~~~~~~~i~~~i~~~~~~~~viil 63 (122)
T cd00006 3 IIIATHG--GFASGLLNSAEMILGEQENVEAIDFPP--------------GESPDDLLEKIKAALAELDSGEGVLIL 63 (122)
T ss_pred EEEEcCH--HHHHHHHHHHHHhcCCCCCeEEEEeCC--------------CCCHHHHHHHHHHHHHHhCCCCcEEEE
Confidence 5778898 333344455566543333666776651 114567888999999988654445443
No 264
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=29.18 E-value=1.7e+02 Score=26.72 Aligned_cols=36 Identities=19% Similarity=0.105 Sum_probs=24.2
Q ss_pred CCcEEEEEeCCCCCCCcchHHHHHhc---CCCCeEEEEe
Q 022534 233 DKPVLVAWGISDKYLPQSVAEEFQKG---NPNVVKLQMI 268 (295)
Q Consensus 233 ~~P~l~i~G~~D~~~~~~~~~~~~~~---~~~~~~~~~i 268 (295)
++=-+..|+..|..+|.+.-.++.+. +.=+++++.|
T Consensus 293 ~~~yvsYHs~~D~~~p~~~K~~l~~~l~~lgfda~l~lI 331 (403)
T PF11144_consen 293 KIIYVSYHSIKDDLAPAEDKEELYEILKNLGFDATLHLI 331 (403)
T ss_pred ceEEEEEeccCCCCCCHHHHHHHHHHHHHcCCCeEEEEe
Confidence 34556679999999987766555443 3334677777
No 265
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=29.14 E-value=51 Score=27.56 Aligned_cols=37 Identities=8% Similarity=0.157 Sum_probs=28.9
Q ss_pred CceEEEEcCCCCCC--ccchhhHHHhhhCCCeEEEeCCC
Q 022534 35 LGTIVFLHGAPSHS--YSYRNVMSQMSDAGFHCFAPDWL 71 (295)
Q Consensus 35 ~~~vv~lHG~~~~~--~~w~~~~~~l~~~~~~via~Dl~ 71 (295)
.|+||++.|+-++. ..=..+...|..+|++|.++.-|
T Consensus 30 ~~vlIv~eG~DaAGKg~~I~~l~~~lDPRg~~v~~~~~p 68 (230)
T TIGR03707 30 ARVVIVFEGRDAAGKGGTIKRITEHLNPRGARVVALPKP 68 (230)
T ss_pred CCEEEEEeCCCCCCchHHHHHHHHhcCCCeeEEEeCCCC
Confidence 47999999986544 45678888898899999876554
No 266
>COG1866 PckA Phosphoenolpyruvate carboxykinase (ATP) [Energy production and conversion]
Probab=27.06 E-value=73 Score=29.49 Aligned_cols=32 Identities=31% Similarity=0.589 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHHhCCCCceEEEEecccchHHH
Q 022534 90 ENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYG 123 (295)
Q Consensus 90 ~~~~~~~l~~~~~~l~~~~~~~lv~~G~~~G~~~ 123 (295)
...|+..|.+.|++.+.+ +.||-.||.+|++|
T Consensus 403 p~~YA~~L~~~i~~~~~~--vyLvNTGWtGg~yg 434 (529)
T COG1866 403 PTRYAELLGKLIKAHGAN--VYLVNTGWTGGAYG 434 (529)
T ss_pred hhHHHHHHHHHHHHcCCc--EEEEecCccCCCCC
Confidence 468999999999999865 78888999988765
No 267
>cd08769 DAP_dppA_2 Peptidase M55, D-aminopeptidase dipeptide-binding protein family. M55 Peptidase, D-Aminopeptidase dipeptide-binding protein (dppA; DAP dppA; EC 3.4.11.-) domain: Peptide transport systems are found in many bacterial species and generally function to accumulate intact peptides in the cell, where they are hydrolyzed. The dipeptide-binding protein (dppA) of Bacillus subtilis belongs to the dipeptide ABC transport (dpp) operon expressed early during sporulation. It is a binuclear zinc-dependent, D-specific aminopeptidase. The biologically active enzyme is a homodecamer with active sites buried in its channel. These self-compartmentalizing proteases are characterized by a SXDXEG motif. D-Ala-D-Ala and D-Ala-Gly-Gly are the preferred substrates. Bacillus subtilis dppA is thought to function as an adaptation to nutrient deficiency; hydrolysis of its substrate releases D-Ala which can be used subsequently as metabolic fuel. This family also contains a number of uncharacteriz
Probab=27.04 E-value=2e+02 Score=24.75 Aligned_cols=52 Identities=19% Similarity=0.237 Sum_probs=32.1
Q ss_pred CCCCcEEEEEeCCCCCCCcchHHHHHhcCCCCeEEEEec-CCCCCCC-CCChHHHHHHHHH
Q 022534 231 SWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIE-GAGHMPQ-EDWPEKVVDGLRY 289 (295)
Q Consensus 231 ~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~-~~gH~~~-~e~p~~~~~~i~~ 289 (295)
.++||+.++.|++ ..+++..+.+|+ ++.+.++ +.|+..- ---|++..+.|++
T Consensus 145 ~~gVPV~lVsGDd------~~~~ea~~~~P~-~~tv~vK~~~gr~aA~~~~p~~a~~~I~~ 198 (270)
T cd08769 145 EFGVPVVLVAGDS------ELEKEVKEETPW-AVFVPTKESLSRYSAKSPSMKKVKEELRE 198 (270)
T ss_pred hcCCCEEEEecCH------HHHHHHHHhCCC-ceEEEEeeecCCCccccCCHHHHHHHHHH
Confidence 5689999999964 355667777887 5665554 4454332 2345555555543
No 268
>PLN02802 triacylglycerol lipase
Probab=26.99 E-value=1.3e+02 Score=28.48 Aligned_cols=51 Identities=16% Similarity=0.219 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHhCCCCceEEEEecccc-hHHHHHHHH----hCcCc--cceeEEEcCCCC
Q 022534 93 FHEELDKLLDVLEVKYPFFLVVQGFLV-GSYGLTWAL----KNPSR--ISKLAILNSPLT 145 (295)
Q Consensus 93 ~~~~l~~~~~~l~~~~~~~lv~~G~~~-G~~~~~~a~----~~p~~--v~~lil~~~p~~ 145 (295)
..+.|..+++...-+. .-++..|||. |++|...|. ..++. | .++.+++|-.
T Consensus 314 Vl~eV~~Ll~~Y~~e~-~sI~VTGHSLGGALAtLaA~dL~~~~~~~~pV-~vyTFGsPRV 371 (509)
T PLN02802 314 VVGEVRRLMEKYKGEE-LSITVTGHSLGAALALLVADELATCVPAAPPV-AVFSFGGPRV 371 (509)
T ss_pred HHHHHHHHHHhCCCCc-ceEEEeccchHHHHHHHHHHHHHHhCCCCCce-EEEEcCCCCc
Confidence 3445556665543221 2233348876 466655443 33432 3 3455555543
No 269
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=26.35 E-value=1.2e+02 Score=25.19 Aligned_cols=31 Identities=13% Similarity=0.222 Sum_probs=20.2
Q ss_pred CCCHHHHHHHHHHHHHHhC---CCCceEEEEecc
Q 022534 87 DFTENEFHEELDKLLDVLE---VKYPFFLVVQGF 117 (295)
Q Consensus 87 ~~~~~~~~~~l~~~~~~l~---~~~~~~lv~~G~ 117 (295)
.|+.+||...+..+-+.+- -+..++++|||.
T Consensus 114 Ly~k~DYe~~v~aik~~~ppl~k~e~~vlmgHGt 147 (265)
T COG4822 114 LYYKNDYEICVEAIKDQIPPLNKDEILVLMGHGT 147 (265)
T ss_pred eechhhHHHHHHHHHHhcCCcCcCeEEEEEecCC
Confidence 4566778777777776653 345567776664
No 270
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=26.24 E-value=1.8e+02 Score=23.53 Aligned_cols=57 Identities=18% Similarity=0.212 Sum_probs=34.3
Q ss_pred CceEEEEcCCCCCCcc---chhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 022534 35 LGTIVFLHGAPSHSYS---YRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDV 103 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~~---w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~ 103 (295)
+.||+++||-....-- -+...+.|.+.+.+|-.-..+|-|.+-. .+..+++.+|+++
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i~------------~~~~~~~~~~l~~ 214 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEIS------------PEELRDLREFLEK 214 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS--------------HHHHHHHHHHHHH
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCCC------------HHHHHHHHHHHhh
Confidence 4589999998776543 3466677877777777777776554432 2455677777664
No 271
>PRK14581 hmsF outer membrane N-deacetylase; Provisional
Probab=26.20 E-value=1.2e+02 Score=29.83 Aligned_cols=79 Identities=19% Similarity=0.199 Sum_probs=46.1
Q ss_pred CceEEEEcCCCCCC----------ccchhhHHHhhhCCCeEEEeCCCC---CCCCCCCCCC-CCCCCCCHHHHHHHHHHH
Q 022534 35 LGTIVFLHGAPSHS----------YSYRNVMSQMSDAGFHCFAPDWLG---FGFSDKPEKG-YDDFDFTENEFHEELDKL 100 (295)
Q Consensus 35 ~~~vv~lHG~~~~~----------~~w~~~~~~l~~~~~~via~Dl~G---~G~S~~~~~~-~~~~~~~~~~~~~~l~~~ 100 (295)
..+||+-|...... ..|+.+++.|.+.||+++..|..= .|+..-|... .=.++....+....+-.+
T Consensus 48 ~~~VLmYH~V~d~~~~~~~~~Vspe~Fe~QL~~Lk~nGY~~VSL~el~~~~~g~~~LP~KaV~LTFDDGy~sny~~AlPI 127 (672)
T PRK14581 48 TFVVIAYHDVEDDSADQRYLSVRSSALNEQFVWLRDNGYHVVSVDQILAARNGGPTLPDKAVLLTFDDGYSSFYRRVYPL 127 (672)
T ss_pred ceEEEEeCcccCCCCccCccccCHHHHHHHHHHHHHCcCEEecHHHHHHHHhcCCCCCCCeEEEEEEcCCcchHHHHHHH
Confidence 45788899875422 358888999988899999998431 1222111110 000111112345677788
Q ss_pred HHHhCCCCceEEE
Q 022534 101 LDVLEVKYPFFLV 113 (295)
Q Consensus 101 ~~~l~~~~~~~lv 113 (295)
+++.+.+-.++++
T Consensus 128 LKkyg~pATfFvV 140 (672)
T PRK14581 128 LKAYKWSAVLAPV 140 (672)
T ss_pred HHHcCCCEEEEEe
Confidence 9999987444443
No 272
>COG3933 Transcriptional antiterminator [Transcription]
Probab=26.05 E-value=3.4e+02 Score=25.25 Aligned_cols=68 Identities=22% Similarity=0.269 Sum_probs=45.4
Q ss_pred ceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceEEEEe
Q 022534 36 GTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQ 115 (295)
Q Consensus 36 ~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~lv~~ 115 (295)
.+||..||....+.+ -.++..|-.. =-+.++|+| - +-+..+..+.+.+-++..+..+-+.++.
T Consensus 110 ~vIiiAHG~sTASSm-aevanrLL~~-~~~~aiDMP------L--------dvsp~~vle~l~e~~k~~~~~~GlllLV- 172 (470)
T COG3933 110 KVIIIAHGYSTASSM-AEVANRLLGE-EIFIAIDMP------L--------DVSPSDVLEKLKEYLKERDYRSGLLLLV- 172 (470)
T ss_pred eEEEEecCcchHHHH-HHHHHHHhhc-cceeeecCC------C--------cCCHHHHHHHHHHHHHhcCccCceEEEE-
Confidence 489999999765543 4667776653 368899998 1 1245678888888888887655343331
Q ss_pred cccchHH
Q 022534 116 GFLVGSY 122 (295)
Q Consensus 116 G~~~G~~ 122 (295)
.|||+
T Consensus 173 --DMGSL 177 (470)
T COG3933 173 --DMGSL 177 (470)
T ss_pred --ecchH
Confidence 35654
No 273
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=25.31 E-value=1.3e+02 Score=28.39 Aligned_cols=39 Identities=23% Similarity=0.366 Sum_probs=26.4
Q ss_pred CCCceEEEEecccchHHHHHHHHh------CcCccceeEEEcCCCCC
Q 022534 106 VKYPFFLVVQGFLVGSYGLTWALK------NPSRISKLAILNSPLTA 146 (295)
Q Consensus 106 ~~~~~~lv~~G~~~G~~~~~~a~~------~p~~v~~lil~~~p~~~ 146 (295)
-++|+.|| |+|.|+-....|+. .-+.|..++++++|...
T Consensus 445 G~RPVTLV--GFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~ 489 (633)
T KOG2385|consen 445 GNRPVTLV--GFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPT 489 (633)
T ss_pred CCCceeEe--eeccchHHHHHHHHHHhhcccccceeeeeeccCCccC
Confidence 35789998 88888643332322 44568888999888764
No 274
>PRK10319 N-acetylmuramoyl-l-alanine amidase I; Provisional
Probab=25.09 E-value=1.7e+02 Score=25.47 Aligned_cols=16 Identities=31% Similarity=0.299 Sum_probs=13.0
Q ss_pred CCeEEEeCCCCCCCCCC
Q 022534 62 GFHCFAPDWLGFGFSDK 78 (295)
Q Consensus 62 ~~~via~Dl~G~G~S~~ 78 (295)
+-++|++| ||||..|.
T Consensus 55 ~~~~IvID-pGHGG~Dp 70 (287)
T PRK10319 55 GKRVVMLD-PGHGGIDT 70 (287)
T ss_pred CCeEEEEE-CCCCCCCC
Confidence 45788999 89998874
No 275
>PF08197 TT_ORF2a: pORF2a truncated protein; InterPro: IPR013267 Most isolated ORF2 of TT virus (TTV) encode a 49 amino acid protein (pORF2a) because of an in-frame stop codon. ORF2s isolated from G1 TTV encode a 202 amino acid protein (pORF2ab) [].
Probab=24.10 E-value=44 Score=19.73 Aligned_cols=13 Identities=38% Similarity=0.746 Sum_probs=10.0
Q ss_pred eEEEeCCCCCCCC
Q 022534 64 HCFAPDWLGFGFS 76 (295)
Q Consensus 64 ~via~Dl~G~G~S 76 (295)
.+-+-|+||||.-
T Consensus 36 airardwpg~gq~ 48 (49)
T PF08197_consen 36 AIRARDWPGYGQG 48 (49)
T ss_pred ceEeccCCCcCCC
Confidence 4567799999963
No 276
>COG1255 Uncharacterized protein conserved in archaea [Function unknown]
Probab=22.91 E-value=70 Score=23.62 Aligned_cols=24 Identities=21% Similarity=0.351 Sum_probs=20.4
Q ss_pred CccchhhHHHhhhCCCeEEEeCCC
Q 022534 48 SYSYRNVMSQMSDAGFHCFAPDWL 71 (295)
Q Consensus 48 ~~~w~~~~~~l~~~~~~via~Dl~ 71 (295)
.+.+..+++.|+++||.|++.|.-
T Consensus 22 iG~~~~VA~~L~e~g~dv~atDI~ 45 (129)
T COG1255 22 IGFFLDVAKRLAERGFDVLATDIN 45 (129)
T ss_pred cchHHHHHHHHHHcCCcEEEEecc
Confidence 345778999999999999999975
No 277
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=22.73 E-value=6.5e+02 Score=23.70 Aligned_cols=45 Identities=22% Similarity=0.270 Sum_probs=27.1
Q ss_pred chhhHHHhhhCCCeEEEeCCCC----CCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 022534 51 YRNVMSQMSDAGFHCFAPDWLG----FGFSDKPEKGYDDFDFTENEFHEELDKLLD 102 (295)
Q Consensus 51 w~~~~~~l~~~~~~via~Dl~G----~G~S~~~~~~~~~~~~~~~~~~~~l~~~~~ 102 (295)
....+..|.+.|+.|+-|+- | +|....-+ .-..++.+..+..++.
T Consensus 199 t~~Nl~~L~~~G~~vi~P~~-g~lA~~g~~G~Gr------m~e~~~I~~~v~~~~~ 247 (475)
T PRK13982 199 TRRNVAQLKRDGVHMIGPNA-GEMAERGEAGVGR------MAEPLEIAAAAEALLR 247 (475)
T ss_pred HHHHHHHHHHCCCEEECCCC-CccccCCCcCCCC------CCCHHHHHHHHHHHHh
Confidence 34777888888999986654 3 45554321 1134566666666654
No 278
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=22.37 E-value=4.2e+02 Score=21.42 Aligned_cols=39 Identities=15% Similarity=0.115 Sum_probs=24.1
Q ss_pred CHHHHHHHHHHHHHHhCCCCceEEEEeccc---chHHHHHHHHh
Q 022534 89 TENEFHEELDKLLDVLEVKYPFFLVVQGFL---VGSYGLTWALK 129 (295)
Q Consensus 89 ~~~~~~~~l~~~~~~l~~~~~~~lv~~G~~---~G~~~~~~a~~ 129 (295)
..+.|++.+.+++++.+. .++|+++... ++.++..+|.+
T Consensus 92 ~~e~~a~al~~~i~~~~p--~lVL~~~t~~~~~grdlaprlAar 133 (202)
T cd01714 92 DTLATAKALAAAIKKIGV--DLILTGKQSIDGDTGQVGPLLAEL 133 (202)
T ss_pred ChHHHHHHHHHHHHHhCC--CEEEEcCCcccCCcCcHHHHHHHH
Confidence 457899999999988763 2555533222 22566666554
No 279
>PRK07313 phosphopantothenoylcysteine decarboxylase; Validated
Probab=21.95 E-value=2e+02 Score=22.93 Aligned_cols=30 Identities=13% Similarity=0.306 Sum_probs=20.3
Q ss_pred CCccchhhHHHhhhCCCeEEEeCCCCC---CCCC
Q 022534 47 HSYSYRNVMSQMSDAGFHCFAPDWLGF---GFSD 77 (295)
Q Consensus 47 ~~~~w~~~~~~l~~~~~~via~Dl~G~---G~S~ 77 (295)
.+..+.+.+..|.+.|+.|+-|. +|+ |...
T Consensus 128 ~~p~~~~Nl~~L~~~G~~vi~p~-~g~la~~~~g 160 (182)
T PRK07313 128 ENPATQRNLKTLKEDGVQEIEPK-EGLLACGDEG 160 (182)
T ss_pred cCHHHHHHHHHHHHCCCEEECCC-CCccccCCcc
Confidence 33445678888988898877665 666 5544
No 280
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=21.80 E-value=2.7e+02 Score=27.08 Aligned_cols=43 Identities=16% Similarity=0.301 Sum_probs=25.2
Q ss_pred CceEEEEcCCCCCCc---cchhhHHHhhhCCCeEEEeCCC--CCCCCC
Q 022534 35 LGTIVFLHGAPSHSY---SYRNVMSQMSDAGFHCFAPDWL--GFGFSD 77 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~---~w~~~~~~l~~~~~~via~Dl~--G~G~S~ 77 (295)
+.|+|+|||--..-. .=..+...|...|..|-..=+| |||.+.
T Consensus 551 ~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~ 598 (620)
T COG1506 551 KTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSR 598 (620)
T ss_pred CCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCC
Confidence 579999999754222 2234556666556655444444 455554
No 281
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=21.59 E-value=1.3e+02 Score=22.59 Aligned_cols=25 Identities=32% Similarity=0.549 Sum_probs=16.8
Q ss_pred cccchHHH---HHHHHhCcCccceeEEEcC
Q 022534 116 GFLVGSYG---LTWALKNPSRISKLAILNS 142 (295)
Q Consensus 116 G~~~G~~~---~~~a~~~p~~v~~lil~~~ 142 (295)
| +.||+| +.+..++||+++ ++.+++
T Consensus 5 G-sTGSIG~qtLdVi~~~~d~f~-v~~Lsa 32 (129)
T PF02670_consen 5 G-STGSIGTQTLDVIRKHPDKFE-VVALSA 32 (129)
T ss_dssp S-TTSHHHHHHHHHHHHCTTTEE-EEEEEE
T ss_pred c-CCcHHHHHHHHHHHhCCCceE-EEEEEc
Confidence 5 466765 456789999886 555543
No 282
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A ....
Probab=21.39 E-value=73 Score=22.89 Aligned_cols=38 Identities=18% Similarity=0.443 Sum_probs=28.5
Q ss_pred EEEEcCCCCCCccchhhHHHhhhC-CCeEEEeCC--CCCCCCC
Q 022534 38 IVFLHGAPSHSYSYRNVMSQMSDA-GFHCFAPDW--LGFGFSD 77 (295)
Q Consensus 38 vv~lHG~~~~~~~w~~~~~~l~~~-~~~via~Dl--~G~G~S~ 77 (295)
+|+|-|.+++..+ .++..|++. |+.++-.|- +-.+...
T Consensus 1 vI~I~G~~gsGKS--T~a~~La~~~~~~~i~~d~~~~~~~~~~ 41 (121)
T PF13207_consen 1 VIIISGPPGSGKS--TLAKELAERLGFPVISMDDLIREPGWIE 41 (121)
T ss_dssp EEEEEESTTSSHH--HHHHHHHHHHTCEEEEEHHHHCCGTHCH
T ss_pred CEEEECCCCCCHH--HHHHHHHHHHCCeEEEecceEEeccccc
Confidence 5789999888876 566677765 899998888 5555553
No 283
>PLN02753 triacylglycerol lipase
Probab=21.02 E-value=1.9e+02 Score=27.44 Aligned_cols=35 Identities=17% Similarity=0.258 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHhCCC--CceEEEEecccc-hHHHHHHH
Q 022534 93 FHEELDKLLDVLEVK--YPFFLVVQGFLV-GSYGLTWA 127 (295)
Q Consensus 93 ~~~~l~~~~~~l~~~--~~~~lv~~G~~~-G~~~~~~a 127 (295)
....|..++++...+ ...-+...|||. |++|...|
T Consensus 293 Vl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA 330 (531)
T PLN02753 293 ILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSA 330 (531)
T ss_pred HHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHH
Confidence 344555566554321 112233348865 56776554
No 284
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=20.91 E-value=94 Score=27.86 Aligned_cols=38 Identities=21% Similarity=0.280 Sum_probs=25.1
Q ss_pred ceEEEEcC-CCCCCccchhhHHHhhhCCCeEEEeCCCCCCCCC
Q 022534 36 GTIVFLHG-APSHSYSYRNVMSQMSDAGFHCFAPDWLGFGFSD 77 (295)
Q Consensus 36 ~~vv~lHG-~~~~~~~w~~~~~~l~~~~~~via~Dl~G~G~S~ 77 (295)
..+|++=| .+-|.++=.+ +--|++.||+| |+.||+.|-
T Consensus 14 ra~vvVLGDvGRSPRMqYH-A~Sla~~gf~V---dliGy~~s~ 52 (444)
T KOG2941|consen 14 RAIVVVLGDVGRSPRMQYH-ALSLAKLGFQV---DLIGYVESI 52 (444)
T ss_pred eEEEEEecccCCChHHHHH-HHHHHHcCCeE---EEEEecCCC
Confidence 34555555 5555555444 44577779887 999999994
No 285
>PLN02761 lipase class 3 family protein
Probab=20.82 E-value=2e+02 Score=27.32 Aligned_cols=36 Identities=22% Similarity=0.319 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHHhCC---CCceEEEEecccch-HHHHHHH
Q 022534 92 EFHEELDKLLDVLEV---KYPFFLVVQGFLVG-SYGLTWA 127 (295)
Q Consensus 92 ~~~~~l~~~~~~l~~---~~~~~lv~~G~~~G-~~~~~~a 127 (295)
+....|..+++.... +...-+...|||+| ++|...|
T Consensus 273 qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA 312 (527)
T PLN02761 273 QVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSA 312 (527)
T ss_pred HHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHH
Confidence 344555666655421 11222333488764 6765544
No 286
>PF03976 PPK2: Polyphosphate kinase 2 (PPK2); InterPro: IPR022488 This presumed domain is found in one or two copies per protein. The domain is about 230 amino acids in length and has many conserved motifs, it has polyphosphate kinase activity [, ].; PDB: 3CZP_A 3RHF_D 3CZQ_B.
Probab=20.56 E-value=44 Score=27.88 Aligned_cols=37 Identities=11% Similarity=0.229 Sum_probs=26.3
Q ss_pred CceEEEEcCCCCCCc--cchhhHHHhhhCCCeEEEeCCC
Q 022534 35 LGTIVFLHGAPSHSY--SYRNVMSQMSDAGFHCFAPDWL 71 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~--~w~~~~~~l~~~~~~via~Dl~ 71 (295)
.|+||++.|+.++.. .=..+...|..+|++|.++.-|
T Consensus 30 ~~vlIl~eG~d~sGKg~~I~~l~~~lDPR~~~v~~~~~p 68 (228)
T PF03976_consen 30 IPVLILFEGWDASGKGGTINRLIEWLDPRGFRVHAFGKP 68 (228)
T ss_dssp HEEEEEEEESTTSSHHHHHHHHHCCS-GGGEEEEE-SS-
T ss_pred CcEEEEEeccccCCchHHHHHHHHhCCCCeeEEEeCCCC
Confidence 368999999976664 3456667777889999988766
No 287
>PF03205 MobB: Molybdopterin guanine dinucleotide synthesis protein B; PDB: 2F1R_B 1P9N_A 1NP6_B 2NPI_A 1XJC_A.
Probab=20.50 E-value=1.4e+02 Score=22.56 Aligned_cols=43 Identities=12% Similarity=0.244 Sum_probs=27.9
Q ss_pred eEEEEcCCCCCCcc--chhhHHHhhhCCCeEEEeCCCCCCCCCCC
Q 022534 37 TIVFLHGAPSHSYS--YRNVMSQMSDAGFHCFAPDWLGFGFSDKP 79 (295)
Q Consensus 37 ~vv~lHG~~~~~~~--w~~~~~~l~~~~~~via~Dl~G~G~S~~~ 79 (295)
|+|.+-|...+... =+.++..|.++||+|.++=.-+||+.+-.
T Consensus 1 pvv~VvG~~~sGKTTl~~~Li~~l~~~g~~v~~ik~~~~g~~~~d 45 (140)
T PF03205_consen 1 PVVQVVGPKNSGKTTLIRKLINELKRRGYRVAVIKHTDHGQFEID 45 (140)
T ss_dssp -EEEEEESTTSSHHHHHHHHHHHHHHTT--EEEEEE-STTSTTCS
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHhHcCCceEEEEEccCCCcccC
Confidence 46777887655544 45778888888999987777778777643
No 288
>KOG0636 consensus ATP sulfurylase (sulfate adenylyltransferase) [Inorganic ion transport and metabolism]
Probab=20.50 E-value=1.2e+02 Score=27.22 Aligned_cols=44 Identities=23% Similarity=0.274 Sum_probs=32.1
Q ss_pred cCCCCCCCceEEEEcCCCCCCccchhhHHHhhhCCCeEEEeCCC
Q 022534 28 TGSADSRLGTIVFLHGAPSHSYSYRNVMSQMSDAGFHCFAPDWL 71 (295)
Q Consensus 28 ~g~~~~~~~~vv~lHG~~~~~~~w~~~~~~l~~~~~~via~Dl~ 71 (295)
+|++..++.-..-.||.....-+-....+.|...+|||+++|-.
T Consensus 355 ~g~P~~kq~~~~a~~g~~k~vLsmAp~le~Lni~~~R~aa~~~~ 398 (466)
T KOG0636|consen 355 SGPPTEKQGFYDADHGATKKVLSMAPLLERLNILGFRVAAYDKT 398 (466)
T ss_pred cCCCcccCCceecCCccchheeccchhhHHhccCCeeEEEEecc
Confidence 34444445567788996666666778888888889999999854
No 289
>PLN02719 triacylglycerol lipase
Probab=20.48 E-value=2.1e+02 Score=27.11 Aligned_cols=35 Identities=17% Similarity=0.236 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHhCC--CCceEEEEecccc-hHHHHHHH
Q 022534 93 FHEELDKLLDVLEV--KYPFFLVVQGFLV-GSYGLTWA 127 (295)
Q Consensus 93 ~~~~l~~~~~~l~~--~~~~~lv~~G~~~-G~~~~~~a 127 (295)
..+.|..+++...- ....-+...|||+ |++|...|
T Consensus 279 Vl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA 316 (518)
T PLN02719 279 VLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSA 316 (518)
T ss_pred HHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHH
Confidence 34555555554421 1112233348865 46766554
No 290
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=20.22 E-value=1.3e+02 Score=23.38 Aligned_cols=35 Identities=17% Similarity=0.350 Sum_probs=23.9
Q ss_pred ceEEEEcCCCCCCcc--chhhHHHhhhCCCeEEEeCC
Q 022534 36 GTIVFLHGAPSHSYS--YRNVMSQMSDAGFHCFAPDW 70 (295)
Q Consensus 36 ~~vv~lHG~~~~~~~--w~~~~~~l~~~~~~via~Dl 70 (295)
|.+|++=|.+++..+ =..+...|.+.|+.++.+|-
T Consensus 2 g~vIwltGlsGsGKtTlA~~L~~~L~~~g~~~~~LDg 38 (156)
T PF01583_consen 2 GFVIWLTGLSGSGKTTLARALERRLFARGIKVYLLDG 38 (156)
T ss_dssp -EEEEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEH
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEecC
Confidence 589999999887765 12344456567899999873
No 291
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=20.04 E-value=65 Score=28.45 Aligned_cols=84 Identities=17% Similarity=0.292 Sum_probs=48.9
Q ss_pred CceEEEEcCCCCCCc----cchhhHH-----------HhhhCCCeEEEeCCC-CCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 022534 35 LGTIVFLHGAPSHSY----SYRNVMS-----------QMSDAGFHCFAPDWL-GFGFSDKPEKGYDDFDFTENEFHEELD 98 (295)
Q Consensus 35 ~~~vv~lHG~~~~~~----~w~~~~~-----------~l~~~~~~via~Dl~-G~G~S~~~~~~~~~~~~~~~~~~~~l~ 98 (295)
+|-.+.+.|.++.+. .|+++-| .|. .-.++.+|-| |-|.|--.... -|--..+..+.|+.
T Consensus 31 ~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk--~adllfvDnPVGaGfSyVdg~~--~Y~~~~~qia~Dl~ 106 (414)
T KOG1283|consen 31 RPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLK--DADLLFVDNPVGAGFSYVDGSS--AYTTNNKQIALDLV 106 (414)
T ss_pred CCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhh--hccEEEecCCCcCceeeecCcc--cccccHHHHHHHHH
Confidence 567888999976543 3443322 122 2456666765 88888643221 12224567889999
Q ss_pred HHHHHhCC------CCceEEEEecccchHHH
Q 022534 99 KLLDVLEV------KYPFFLVVQGFLVGSYG 123 (295)
Q Consensus 99 ~~~~~l~~------~~~~~lv~~G~~~G~~~ 123 (295)
++++.+=. ..|+++++-.+ +|-++
T Consensus 107 ~llk~f~~~h~e~~t~P~~If~ESY-GGKma 136 (414)
T KOG1283|consen 107 ELLKGFFTNHPEFKTVPLYIFCESY-GGKMA 136 (414)
T ss_pred HHHHHHHhcCccccccceEEEEhhc-ccchh
Confidence 99987621 23677776433 44343
Done!