Query 022539
Match_columns 295
No_of_seqs 263 out of 2151
Neff 7.9
Searched_HMMs 46136
Date Fri Mar 29 04:18:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022539.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/022539hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0484 DnaJ DnaJ-class molecu 100.0 1.2E-75 2.5E-80 537.0 30.0 283 1-292 2-350 (371)
2 PRK14288 chaperone protein Dna 100.0 6.8E-70 1.5E-74 510.3 30.5 282 1-291 1-344 (369)
3 PRK14296 chaperone protein Dna 100.0 1.6E-68 3.5E-73 501.2 32.7 289 1-292 2-361 (372)
4 PTZ00037 DnaJ_C chaperone prot 100.0 2.7E-67 5.9E-72 497.7 28.7 274 2-292 27-366 (421)
5 PRK14286 chaperone protein Dna 100.0 7.1E-66 1.5E-70 483.6 30.7 289 1-291 2-356 (372)
6 PRK14278 chaperone protein Dna 100.0 5.5E-65 1.2E-69 478.5 32.2 280 1-291 1-349 (378)
7 PRK14279 chaperone protein Dna 100.0 6.1E-65 1.3E-69 480.0 30.7 287 1-291 7-377 (392)
8 PRK14295 chaperone protein Dna 100.0 1.5E-64 3.2E-69 476.9 32.6 286 1-291 7-371 (389)
9 PRK14298 chaperone protein Dna 100.0 1.1E-64 2.5E-69 475.9 31.7 279 2-291 4-350 (377)
10 PRK14285 chaperone protein Dna 100.0 1.9E-64 4.2E-69 472.8 32.4 288 1-292 1-353 (365)
11 PRK14282 chaperone protein Dna 100.0 4.7E-64 1E-68 471.4 32.9 288 2-292 3-363 (369)
12 PRK14277 chaperone protein Dna 100.0 2.6E-64 5.7E-69 475.4 30.5 285 2-291 4-364 (386)
13 PRK14287 chaperone protein Dna 100.0 4.1E-64 8.8E-69 471.6 31.5 279 1-291 2-347 (371)
14 PRK14281 chaperone protein Dna 100.0 4.2E-64 9.2E-69 475.3 31.8 288 1-291 1-371 (397)
15 PRK14276 chaperone protein Dna 100.0 3.5E-64 7.6E-69 473.6 30.9 280 1-291 2-355 (380)
16 PRK14280 chaperone protein Dna 100.0 4.5E-64 9.8E-69 472.3 30.9 280 1-291 1-352 (376)
17 PRK14297 chaperone protein Dna 100.0 8.3E-64 1.8E-68 471.4 32.3 286 2-292 3-358 (380)
18 PRK14284 chaperone protein Dna 100.0 8.3E-64 1.8E-68 472.7 32.3 286 3-291 1-365 (391)
19 PRK14301 chaperone protein Dna 100.0 1E-63 2.2E-68 469.1 30.7 284 2-291 3-349 (373)
20 PRK14294 chaperone protein Dna 100.0 1.9E-63 4.2E-68 466.7 30.8 286 1-291 1-349 (366)
21 PRK14300 chaperone protein Dna 100.0 4.4E-63 9.5E-68 465.0 30.5 285 1-291 1-351 (372)
22 PRK14291 chaperone protein Dna 100.0 4E-63 8.6E-68 466.8 30.1 288 1-291 1-369 (382)
23 PRK14299 chaperone protein Dna 100.0 1.1E-62 2.3E-67 448.6 28.8 270 2-294 3-288 (291)
24 PRK14283 chaperone protein Dna 100.0 2.6E-62 5.6E-67 460.9 31.6 284 2-291 4-355 (378)
25 PRK14290 chaperone protein Dna 100.0 2.9E-62 6.3E-67 458.6 31.5 288 1-292 1-356 (365)
26 PRK10767 chaperone protein Dna 100.0 2.8E-62 6.1E-67 460.1 31.5 281 2-291 3-347 (371)
27 TIGR02349 DnaJ_bact chaperone 100.0 1.2E-61 2.6E-66 453.6 30.0 284 4-292 1-353 (354)
28 PRK10266 curved DNA-binding pr 100.0 1.3E-60 2.8E-65 437.8 29.2 283 1-292 2-293 (306)
29 PRK14293 chaperone protein Dna 100.0 2.2E-60 4.7E-65 447.3 29.3 287 1-291 1-353 (374)
30 PRK14289 chaperone protein Dna 100.0 8.4E-60 1.8E-64 445.2 31.2 286 2-291 4-363 (386)
31 PRK14292 chaperone protein Dna 100.0 1.7E-59 3.7E-64 441.2 31.1 282 2-291 1-347 (371)
32 KOG0712 Molecular chaperone (D 100.0 6.6E-60 1.4E-64 427.5 20.9 270 2-290 3-337 (337)
33 KOG0713 Molecular chaperone (D 100.0 1.3E-43 2.8E-48 317.6 10.2 273 2-280 15-328 (336)
34 TIGR03835 termin_org_DnaJ term 100.0 5.2E-35 1.1E-39 284.8 21.2 157 116-276 658-816 (871)
35 KOG0715 Molecular chaperone (D 100.0 2.2E-29 4.8E-34 228.1 11.8 188 4-216 44-288 (288)
36 KOG0714 Molecular chaperone (D 99.9 1.5E-26 3.3E-31 209.8 18.1 256 1-256 1-305 (306)
37 PF01556 CTDII: DnaJ C termina 99.9 2.6E-23 5.7E-28 154.3 8.7 81 205-285 1-81 (81)
38 KOG0716 Molecular chaperone (D 99.8 4.6E-21 1E-25 167.4 3.5 72 3-75 31-102 (279)
39 COG2214 CbpA DnaJ-class molecu 99.8 4.2E-19 9.1E-24 154.1 14.4 193 1-206 4-227 (237)
40 KOG0717 Molecular chaperone (D 99.8 1.8E-20 3.9E-25 173.7 3.1 75 1-75 6-80 (508)
41 KOG0718 Molecular chaperone (D 99.8 2.7E-20 5.9E-25 172.6 4.2 73 3-75 9-83 (546)
42 PTZ00341 Ring-infected erythro 99.8 3.3E-19 7.2E-24 178.4 6.5 75 2-78 572-646 (1136)
43 KOG0691 Molecular chaperone (D 99.8 2.4E-19 5.2E-24 161.6 4.4 74 2-76 4-77 (296)
44 PF00226 DnaJ: DnaJ domain; I 99.8 4E-19 8.8E-24 125.7 3.3 64 4-67 1-64 (64)
45 KOG0624 dsRNA-activated protei 99.7 5.4E-18 1.2E-22 153.0 7.6 73 2-75 393-467 (504)
46 KOG0719 Molecular chaperone (D 99.7 2.9E-18 6.4E-23 146.6 4.2 73 1-73 12-85 (264)
47 smart00271 DnaJ DnaJ molecular 99.7 4.4E-17 9.5E-22 113.6 6.5 60 3-62 1-60 (60)
48 KOG0721 Molecular chaperone (D 99.7 5.8E-17 1.3E-21 137.5 5.0 69 3-72 99-167 (230)
49 TIGR03835 termin_org_DnaJ term 99.7 7.8E-17 1.7E-21 158.3 6.0 71 3-75 2-72 (871)
50 PHA03102 Small T antigen; Revi 99.7 6.5E-17 1.4E-21 132.7 4.5 68 3-75 5-74 (153)
51 cd06257 DnaJ DnaJ domain or J- 99.7 2.1E-16 4.5E-21 108.2 6.2 55 4-59 1-55 (55)
52 PRK01356 hscB co-chaperone Hsc 99.5 5.3E-15 1.2E-19 123.9 5.0 67 2-68 1-71 (166)
53 PRK05014 hscB co-chaperone Hsc 99.5 7.6E-15 1.7E-19 123.7 5.8 66 3-68 1-72 (171)
54 PRK03578 hscB co-chaperone Hsc 99.5 6.4E-14 1.4E-18 118.4 5.8 67 2-68 5-77 (176)
55 KOG0722 Molecular chaperone (D 99.5 1.8E-14 3.9E-19 124.8 2.2 65 3-69 33-97 (329)
56 PRK00294 hscB co-chaperone Hsc 99.5 9.6E-14 2.1E-18 116.9 6.1 67 2-68 3-75 (173)
57 KOG0550 Molecular chaperone (D 99.4 4.1E-14 9E-19 130.6 3.4 66 3-68 373-438 (486)
58 PTZ00100 DnaJ chaperone protei 99.4 4.2E-13 9.2E-18 104.7 4.9 51 3-58 65-115 (116)
59 KOG0720 Molecular chaperone (D 99.4 3.4E-13 7.3E-18 125.8 3.9 66 2-69 234-299 (490)
60 PRK09430 djlA Dna-J like membr 99.3 2E-12 4.3E-17 116.6 4.3 57 3-59 200-262 (267)
61 PHA02624 large T antigen; Prov 99.3 2.2E-12 4.9E-17 125.8 4.6 59 3-66 11-71 (647)
62 COG5407 SEC63 Preprotein trans 99.2 5.3E-12 1.2E-16 117.4 3.0 70 3-72 98-171 (610)
63 PRK01773 hscB co-chaperone Hsc 99.2 3.4E-11 7.4E-16 101.5 5.8 67 2-68 1-73 (173)
64 PRK14299 chaperone protein Dna 99.1 5.2E-10 1.1E-14 102.3 9.5 73 199-279 125-197 (291)
65 TIGR00714 hscB Fe-S protein as 99.0 2.8E-10 6.2E-15 94.6 5.5 55 14-68 2-60 (157)
66 PRK14282 chaperone protein Dna 99.0 3.7E-10 8E-15 106.6 6.7 85 112-208 273-358 (369)
67 PF01556 CTDII: DnaJ C termina 99.0 6.5E-10 1.4E-14 82.3 5.3 72 116-199 1-74 (81)
68 KOG1150 Predicted molecular ch 99.0 3.6E-10 7.7E-15 95.0 4.1 66 2-67 52-117 (250)
69 PRK14290 chaperone protein Dna 98.9 1.5E-09 3.3E-14 102.2 6.4 85 112-209 267-352 (365)
70 COG5269 ZUO1 Ribosome-associat 98.9 6.7E-10 1.5E-14 97.4 2.7 67 3-69 43-113 (379)
71 PRK14294 chaperone protein Dna 98.9 2.4E-09 5.2E-14 101.0 6.7 85 111-208 260-345 (366)
72 PRK10266 curved DNA-binding pr 98.9 8.2E-09 1.8E-13 95.1 9.8 77 201-278 115-204 (306)
73 PRK14285 chaperone protein Dna 98.9 2.8E-09 6.1E-14 100.4 6.5 83 112-206 263-346 (365)
74 PRK14289 chaperone protein Dna 98.8 1.4E-08 3E-13 96.5 9.1 83 202-285 126-280 (386)
75 PRK10767 chaperone protein Dna 98.8 5.9E-09 1.3E-13 98.6 6.3 85 112-209 259-344 (371)
76 PRK14284 chaperone protein Dna 98.8 8.6E-09 1.9E-13 98.0 6.5 84 111-206 274-359 (391)
77 PRK14298 chaperone protein Dna 98.8 7.8E-09 1.7E-13 97.8 5.9 84 112-208 262-346 (377)
78 PRK14300 chaperone protein Dna 98.8 2.2E-08 4.8E-13 94.6 9.0 78 112-201 262-340 (372)
79 TIGR02349 DnaJ_bact chaperone 98.8 1.3E-08 2.9E-13 95.6 6.6 81 112-205 264-345 (354)
80 PRK14279 chaperone protein Dna 98.8 3.1E-08 6.8E-13 94.2 9.0 75 112-199 290-364 (392)
81 PRK14287 chaperone protein Dna 98.7 2.9E-08 6.3E-13 93.8 8.2 81 112-205 259-340 (371)
82 PRK14301 chaperone protein Dna 98.7 4E-08 8.6E-13 92.9 8.9 81 111-204 260-341 (373)
83 PRK14295 chaperone protein Dna 98.7 4.9E-08 1.1E-12 92.7 8.8 75 112-198 283-357 (389)
84 PRK14291 chaperone protein Dna 98.7 5.2E-08 1.1E-12 92.4 8.7 74 112-197 272-346 (382)
85 PRK14288 chaperone protein Dna 98.7 5.9E-08 1.3E-12 91.6 8.9 81 111-203 254-335 (369)
86 PRK14293 chaperone protein Dna 98.7 2.5E-08 5.5E-13 94.3 5.8 83 112-207 264-348 (374)
87 PRK14276 chaperone protein Dna 98.6 1.1E-07 2.3E-12 90.2 8.8 75 112-199 267-342 (380)
88 PRK14292 chaperone protein Dna 98.6 1.3E-07 2.9E-12 89.4 8.4 80 111-203 258-338 (371)
89 PRK14280 chaperone protein Dna 98.6 2E-07 4.3E-12 88.3 9.0 75 112-199 264-339 (376)
90 PRK14286 chaperone protein Dna 98.6 2E-07 4.3E-12 88.2 8.7 78 112-201 267-345 (372)
91 PRK14281 chaperone protein Dna 98.6 2E-07 4.3E-12 88.9 8.6 74 112-198 283-357 (397)
92 PRK14283 chaperone protein Dna 98.6 3.4E-07 7.5E-12 86.8 10.2 79 201-280 117-267 (378)
93 COG0484 DnaJ DnaJ-class molecu 98.5 2.9E-07 6.3E-12 85.7 8.8 77 112-201 261-338 (371)
94 PRK14297 chaperone protein Dna 98.5 2.6E-07 5.6E-12 87.7 8.5 74 112-198 269-343 (380)
95 PRK14278 chaperone protein Dna 98.5 4.1E-07 8.8E-12 86.2 9.1 75 112-198 260-335 (378)
96 PRK14277 chaperone protein Dna 98.5 6.2E-07 1.3E-11 85.2 8.8 74 112-198 276-350 (386)
97 PTZ00037 DnaJ_C chaperone prot 98.4 6.5E-07 1.4E-11 85.8 8.2 74 111-196 270-347 (421)
98 PRK14296 chaperone protein Dna 98.4 8.7E-07 1.9E-11 83.8 8.7 73 114-199 273-347 (372)
99 KOG0568 Molecular chaperone (D 98.4 1.9E-07 4.1E-12 80.4 3.3 54 4-59 48-102 (342)
100 KOG1789 Endocytosis protein RM 98.3 4.2E-07 9.1E-12 92.4 4.4 52 4-59 1282-1337(2235)
101 KOG0723 Molecular chaperone (D 98.1 4.4E-06 9.5E-11 63.5 5.1 50 7-61 60-109 (112)
102 KOG3192 Mitochondrial J-type c 97.1 0.00027 5.9E-09 57.6 2.2 66 3-68 8-79 (168)
103 KOG0712 Molecular chaperone (D 96.9 0.0025 5.5E-08 58.9 6.7 75 111-197 248-324 (337)
104 COG1076 DjlA DnaJ-domain-conta 96.5 0.0014 3.1E-08 55.4 2.0 55 3-57 113-173 (174)
105 COG1076 DjlA DnaJ-domain-conta 95.8 0.0042 9.1E-08 52.6 1.3 65 4-68 2-72 (174)
106 KOG0431 Auxilin-like protein a 95.1 0.024 5.1E-07 55.1 4.2 44 13-56 398-447 (453)
107 PF03656 Pam16: Pam16; InterP 93.5 0.13 2.8E-06 41.2 4.5 51 6-61 61-111 (127)
108 PF13446 RPT: A repeated domai 88.7 0.89 1.9E-05 31.3 4.3 25 5-29 7-31 (62)
109 PF11833 DUF3353: Protein of u 86.6 0.98 2.1E-05 38.9 4.2 40 12-60 1-41 (194)
110 KOG0724 Zuotin and related mol 86.5 0.61 1.3E-05 43.4 3.1 55 14-68 3-60 (335)
111 COG5552 Uncharacterized conser 78.3 7.6 0.00016 27.8 5.3 37 1-37 1-37 (88)
112 PF14687 DUF4460: Domain of un 73.1 6 0.00013 30.9 4.1 48 13-60 4-54 (112)
113 PF10041 DUF2277: Uncharacteri 59.9 47 0.001 24.0 6.0 57 1-59 1-61 (78)
114 PF12991 DUF3875: Domain of un 58.1 13 0.00027 25.0 2.7 25 262-286 26-52 (54)
115 TIGR02642 phage_xxxx uncharact 58.0 12 0.00026 32.0 3.3 44 129-174 105-150 (186)
116 PF07709 SRR: Seven Residue Re 56.9 6.5 0.00014 18.8 0.9 13 46-58 2-14 (14)
117 PRK14051 negative regulator Gr 49.0 85 0.0018 24.3 6.3 71 184-256 47-119 (123)
118 COG2214 CbpA DnaJ-class molecu 48.9 68 0.0015 26.7 6.8 71 205-278 150-220 (237)
119 PF12434 Malate_DH: Malate deh 47.0 23 0.0005 20.2 2.2 17 17-33 10-26 (28)
120 PF09285 Elong-fact-P_C: Elong 44.3 35 0.00075 23.2 3.3 20 156-175 30-49 (56)
121 smart00841 Elong-fact-P_C Elon 42.0 29 0.00062 23.6 2.6 20 156-175 30-49 (56)
122 cd02639 R3H_RRM R3H domain of 39.6 39 0.00085 23.2 3.0 22 269-290 17-38 (60)
123 cd05794 S1_EF-P_repeat_2 S1_EF 38.0 36 0.00078 23.1 2.6 20 156-175 30-49 (56)
124 PF07739 TipAS: TipAS antibiot 35.9 37 0.0008 25.9 2.8 52 10-71 51-104 (118)
125 KOG0315 G-protein beta subunit 35.6 39 0.00085 30.4 3.1 31 209-239 19-50 (311)
126 PF12791 RsgI_N: Anti-sigma fa 34.6 1E+02 0.0022 20.4 4.4 37 219-255 4-40 (56)
127 PF06675 DUF1177: Protein of u 34.1 1.2E+02 0.0026 27.2 5.9 89 183-273 79-178 (276)
128 COG2879 Uncharacterized small 31.8 80 0.0017 22.0 3.4 27 24-53 28-54 (65)
129 KOG0715 Molecular chaperone (D 30.7 59 0.0013 29.7 3.6 39 232-279 234-272 (288)
130 PF02736 Myosin_N: Myosin N-te 27.3 1.4E+02 0.003 18.7 3.8 34 200-236 6-39 (42)
131 KOG3442 Uncharacterized conser 25.7 94 0.002 24.7 3.4 31 7-37 63-93 (132)
132 cd01388 SOX-TCF_HMG-box SOX-TC 23.4 89 0.0019 21.7 2.7 41 22-68 14-54 (72)
133 COG5435 Uncharacterized conser 22.9 1.4E+02 0.003 24.5 4.0 31 262-292 108-138 (147)
134 cd00084 HMG-box High Mobility 22.8 98 0.0021 20.5 2.8 41 21-67 12-52 (66)
135 cd06007 R3H_DEXH_helicase R3H 22.2 1.2E+02 0.0026 20.7 3.0 23 269-291 16-38 (59)
136 PF08774 VRR_NUC: VRR-NUC doma 21.7 1.5E+02 0.0033 21.9 3.9 28 266-293 62-90 (100)
137 smart00276 GLECT Galectin. Gal 21.2 1.4E+02 0.0031 23.3 3.8 42 235-276 3-49 (128)
No 1
>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.2e-75 Score=536.97 Aligned_cols=283 Identities=34% Similarity=0.578 Sum_probs=244.6
Q ss_pred CCCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCccCCC
Q 022539 1 MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASDFG 80 (295)
Q Consensus 1 m~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~g 80 (295)
|.+|||+||||+++||.+|||+|||+||++||||+|+.+ ++|+++|++|++||||||||+||++||+||+.+++.++++
T Consensus 2 ~~~dyYeiLGV~k~As~~EIKkAYRkLA~kyHPD~n~g~-~~AeeKFKEI~eAYEVLsD~eKRa~YD~fG~~~~~~gg~g 80 (371)
T COG0484 2 AKRDYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGD-KEAEEKFKEINEAYEVLSDPEKRAAYDQFGHAGFKAGGFG 80 (371)
T ss_pred CccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-HHHHHHHHHHHHHHHHhCCHHHHHHhhccCccccccCCcC
Confidence 679999999999999999999999999999999999953 6899999999999999999999999999999999855544
Q ss_pred CCCC--CCCCCCCccccCCCCCCCCCCC-----CCCCCCCCCCeeeecccCHHHHhcCceeEEEEeEEeeC----CC---
Q 022539 81 TPSY--HHPHDTKPCATRNNNNNNHRAG-----GAGPKPTPTPIETQLLCTLEELYKGARKKMKISRVLPD----HF--- 146 (295)
Q Consensus 81 ~~~~--~~~~~~~~f~~~~~~~~~f~~~-----~~~~~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~----g~--- 146 (295)
+.+| |.....+.|+. .|+++ .++.++++.|+.+.|+|||+||++|++++|.+.+.+.| |+
T Consensus 81 g~g~~~fgg~~~DIF~~------~FgGg~~~~~~~~~~~rG~Dl~~~l~isleEa~~G~~~~i~~~~~~~C~~C~GsGak 154 (371)
T COG0484 81 GFGFGGFGGDFGDIFED------FFGGGGGGRRRPNRPRRGADLRYNLEITLEEAVFGVKKEIRVTRSVTCSTCHGSGAK 154 (371)
T ss_pred CCCcCCCCCCHHHHHHH------hhcCCCcccCCCCCcccCCceEEEEEeEhhhhccCceeeEecceeeECCcCCCCCCC
Confidence 3221 11100012221 12211 12456789999999999999999999999999887542 11
Q ss_pred --------------C-------------------------------------cEEEEEEEEEEEeCCCCcCCCeEecCCC
Q 022539 147 --------------G-------------------------------------KPITVQEILKIDIKPGWKKGTKITFPEK 175 (295)
Q Consensus 147 --------------G-------------------------------------~~~~~~~~l~V~Ip~G~~~G~~i~~~g~ 175 (295)
| ..+.+.++++|+||+|+.+|++|+++|+
T Consensus 155 ~gt~~~tC~tC~G~G~v~~~~~~g~~~~~~~C~~C~G~G~~i~~pC~~C~G~G~v~~~~~i~V~IPaGv~~g~~ir~~g~ 234 (371)
T COG0484 155 PGTDPKTCPTCNGSGQVRTVQRTGFFSFQQTCPTCNGTGKIIKDPCGKCKGKGRVKKKKSISVNIPAGVDDGDRIRLSGE 234 (371)
T ss_pred CCCCCCcCCCCCCcCeEEEEEeeeEEEEEEECCCCccceeECCCCCCCCCCCCeEeeeeEEEEECCCCCccCCEEEEecC
Confidence 1 0577888999999999999999999999
Q ss_pred CCCCC-CCCCccEEEEEEEeCCcceeecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCCCCCCcEEEEcCCCc
Q 022539 176 GNQEP-GLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGM 254 (295)
Q Consensus 176 G~~~~-~~~~GDliv~i~v~~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~~~~g~~~rl~g~G~ 254 (295)
|+++. ++++|||||+|.|++|+.|.|+|+||+++++|++.+|++|+++.|+|++|+ ++|+||+++++|+++||+|+||
T Consensus 235 G~~g~~Ggp~GDLyv~i~v~~h~~F~R~g~dL~~~~~Is~~~AalG~~i~vptl~g~-~~l~ip~Gtq~G~~~rl~gkG~ 313 (371)
T COG0484 235 GEAGPNGGPAGDLYVFVHVKPHPIFERDGDDLYCEVPISFTEAALGGEIEVPTLDGR-VKLKIPAGTQTGEVFRLRGKGM 313 (371)
T ss_pred cccCCCCCCCccEEEEEEeecCCCeEECCCceEeccccCHHHHhcCCEEEEEecCCC-EEEecCCCCccCcEEEEcCCCc
Confidence 99986 777899999999999999999999999999999999999999999999998 9999999999999999999999
Q ss_pred CCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHhCC
Q 022539 255 PISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALGG 292 (295)
Q Consensus 255 p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~~l~~~l~~ 292 (295)
|... +..+|||||+++|++|++||.+|+++|+++...
T Consensus 314 p~~~-~~~~GDl~v~v~v~~P~~ls~~q~~lL~~~~~~ 350 (371)
T COG0484 314 PKLR-SGGRGDLYVRVKVETPKNLSDEQKELLEEFAKS 350 (371)
T ss_pred cccC-CCCcCCEEEEEEEEcCCCCCHHHHHHHHHHHHh
Confidence 9765 356799999999999999999999999999863
No 2
>PRK14288 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=6.8e-70 Score=510.32 Aligned_cols=282 Identities=28% Similarity=0.460 Sum_probs=239.4
Q ss_pred CCCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCccCCC
Q 022539 1 MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASDFG 80 (295)
Q Consensus 1 m~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~g 80 (295)
|+.|||+||||+++||.+|||+|||+||++||||+|+.+ ++|+++|++|++||+|||||.+|++||+||+++++.++.+
T Consensus 1 ~~~dyY~vLgv~~~As~~eIkkayrkla~k~HPD~~~~~-~~a~~~f~~i~~AYevLsd~~kR~~YD~~G~~~~~~~~~~ 79 (369)
T PRK14288 1 MELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGD-KEAEEKFKLINEAYGVLSDEKKRALYDRYGKKGLNQAGAS 79 (369)
T ss_pred CCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCc-cHHHHHHHHHHHHHHHhccHHHHHHHHHhcccccccCCCC
Confidence 889999999999999999999999999999999999854 4689999999999999999999999999999887632211
Q ss_pred CCCCCCCC--CC-CccccCCCCCCCCCCC----CCCCCCCCCCeeeecccCHHHHhcCceeEEEEeEEeeC----CC---
Q 022539 81 TPSYHHPH--DT-KPCATRNNNNNNHRAG----GAGPKPTPTPIETQLLCTLEELYKGARKKMKISRVLPD----HF--- 146 (295)
Q Consensus 81 ~~~~~~~~--~~-~~f~~~~~~~~~f~~~----~~~~~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~----g~--- 146 (295)
+.+ |++. +. +.|+. .|+++ ....+++++|+.+.|.|||+|+|+|+++++.+.|.+.| |+
T Consensus 80 ~~~-~~~~f~~~~~~F~~------~fg~g~~~~~~~~~~~g~di~~~l~vslee~~~G~~~~i~~~r~~~C~~C~G~G~~ 152 (369)
T PRK14288 80 QSD-FSDFFEDLGSFFED------AFGFGARGSKRQKSSIAPDYLQTIELSFKEAVFGCKKTIKVQYQSVCESCDGTGAK 152 (369)
T ss_pred ccc-cccchhhHHHHHHh------hcCCCCcccCcCCCCCCCCeeEeccccHHHHhCCeEEEEEEEeeccCCCCCCcccC
Confidence 112 2110 00 11221 12211 11224578999999999999999999999999876321 11
Q ss_pred -----------------------------------C-------------cEEEEEEEEEEEeCCCCcCCCeEecCCCCCC
Q 022539 147 -----------------------------------G-------------KPITVQEILKIDIKPGWKKGTKITFPEKGNQ 178 (295)
Q Consensus 147 -----------------------------------G-------------~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~ 178 (295)
| .++.+.++++|.||||+++|++|+|+|+|++
T Consensus 153 ~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~IP~G~~~G~~i~l~g~G~~ 232 (369)
T PRK14288 153 DKALETCKQCNGQGQVFMRQGFMSFAQTCGACQGKGKIIKTPCQACKGKTYILKDEEIDAIIPEGIDDQNRMVLKNKGNE 232 (369)
T ss_pred CCCCcCCCCCCCCcEEEEEeceEEEEEecCCCCCCceEccccCccCCCcceEEEEEEEEEecCCCCCCCCEEEEccCccC
Confidence 1 1456778999999999999999999999999
Q ss_pred CCCCCCccEEEEEEEeCCcceeecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCCCCCCcEEEEcCCCcCCCC
Q 022539 179 EPGLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGMPISK 258 (295)
Q Consensus 179 ~~~~~~GDliv~i~v~~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~~~~g~~~rl~g~G~p~~~ 258 (295)
.+++.+|||+|+|++++|+.|+|+|+||+++++|||.|||+|+++.|+||||+.++|+||+++++|++++|+|+|||..+
T Consensus 233 ~~~~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~i~v~tLdG~~l~i~i~~~~~~g~~~~i~g~G~p~~~ 312 (369)
T PRK14288 233 YEKGKRGDLYLEARVKEDEHFKREGCDLFIEAPVFFTTIALGHTIKVPSLKGDELELKIPRNARDRQTFAFRNEGVKHPE 312 (369)
T ss_pred CCCCCCCCEEEEEEEEECCCcEEeCCEEEEEEecCHHHHhcCCEEEeecCCCCEEEEEeCCCCCCCcEEEEcCCCCCCCC
Confidence 88888999999999999999999999999999999999999999999999998899999999999999999999999765
Q ss_pred CCCCCCCEEEEEEEECCCCCCHHHHHHHHHHhC
Q 022539 259 DPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALG 291 (295)
Q Consensus 259 ~~~~~GDL~v~~~v~~P~~l~~~~~~~l~~~l~ 291 (295)
+..+|||||+|+|.+|+.|+++|+++|+++++
T Consensus 313 -~~~~GDL~v~~~v~~P~~ls~~q~~~l~~~~~ 344 (369)
T PRK14288 313 -SSYRGSLIVELQVIYPKSLNKEQQELLEKLHA 344 (369)
T ss_pred -CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence 34689999999999999999999999999986
No 3
>PRK14296 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.6e-68 Score=501.19 Aligned_cols=289 Identities=26% Similarity=0.421 Sum_probs=235.9
Q ss_pred CCCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCcc-CC
Q 022539 1 MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKAS-DF 79 (295)
Q Consensus 1 m~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~-~~ 79 (295)
-.+|||+||||+++||.+|||+|||+||++||||+|++ +.|+++|++|++||+|||||.+|+.||+||+++++.+ ++
T Consensus 2 ~~~dyY~~Lgv~~~a~~~eik~ayrkla~~~HPD~n~~--~~a~~~F~~i~~AyevLsD~~KR~~YD~~G~~~~~~~~~~ 79 (372)
T PRK14296 2 KKKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKS--PDAHDKMVEINEAADVLLDKDKRKQYDQFGHAAFDGSSGF 79 (372)
T ss_pred CCCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--chHHHHHHHHHHHHHHhcCHHHhhhhhhccchhhcCCCCc
Confidence 03799999999999999999999999999999999975 4689999999999999999999999999999877632 11
Q ss_pred CC--CCC---CCCCCCCccccCCCCC-CCCCCCC--CCCCCCCCCeeeecccCHHHHhcCceeEEEEeEEeeC-------
Q 022539 80 GT--PSY---HHPHDTKPCATRNNNN-NNHRAGG--AGPKPTPTPIETQLLCTLEELYKGARKKMKISRVLPD------- 144 (295)
Q Consensus 80 g~--~~~---~~~~~~~~f~~~~~~~-~~f~~~~--~~~~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~------- 144 (295)
++ ++| |+....+.|..+..-| +.|++++ ...+.+++|+++.|.|||+|+|+|+++++.+.+.+.|
T Consensus 80 ~~~~~~~~~~~~~~~~~g~~~f~d~f~~~fggg~~~~~~~~~g~di~~~l~ltlee~~~G~~~~i~~~~~~~C~~C~G~G 159 (372)
T PRK14296 80 SSNFGDFEDLFSNMGSSGFSSFTNIFSDFFGSNKSDYQRSTKGQSVSLDIYLTFKELLFGVDKIIELDLLTNCSKCFGSG 159 (372)
T ss_pred CcCCCccccccccccccccccchhhhhhhcCCCccCCCCcCCCCCeEEEeeccHHHhhCCeeEEEEEeeeeccCCCCCCc
Confidence 11 111 1100000011000001 1233221 1334578999999999999999999999999765321
Q ss_pred --------------CCCc---------------------------------------EEEEEEEEEEEeCCCCcCCCeEe
Q 022539 145 --------------HFGK---------------------------------------PITVQEILKIDIKPGWKKGTKIT 171 (295)
Q Consensus 145 --------------g~G~---------------------------------------~~~~~~~l~V~Ip~G~~~G~~i~ 171 (295)
|+|. ++.+.++++|.||||+++|++|+
T Consensus 160 ~~~~~~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~ 239 (372)
T PRK14296 160 AESNSDIHICNNCHGTGEVLVQKNMGFFQFQQSAKCNVCNGAGKIIKNKCKNCKGKGKYLERKKIEVNIPKGIRPNQQIK 239 (372)
T ss_pred cCCCCCCccCCCCCCCceEEEEEeccceEEEEEecCCCcCCcceeecccccCCCCceEEEEEEEEEEEECCCCCCCCEEE
Confidence 1111 24556799999999999999999
Q ss_pred cCCCCCCC-CCCCCccEEEEEEEeCCcceeec-CCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCCCCCCcEEEE
Q 022539 172 FPEKGNQE-PGLPPADLIFVVEEKPHAVFQRD-GNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVI 249 (295)
Q Consensus 172 ~~g~G~~~-~~~~~GDliv~i~v~~h~~f~r~-g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~~~~g~~~rl 249 (295)
|+|+|++. +++.+|||+|+|+++||+.|+|+ |+||+++++|||++||+|+++.|+||||+ ++|+||+++++|++++|
T Consensus 240 ~~g~G~~~~~~~~~GDL~v~v~v~~h~~F~R~~G~DL~~~~~Isl~eAllG~~~~i~tldG~-~~v~ip~~t~~g~~~ri 318 (372)
T PRK14296 240 LSQKGHASLNNGVNGDLIIDIYLKESKVFEIINNNDILMTYNISYLDAILGNEIIIKTLDGD-IKYKLPKSINSNELIII 318 (372)
T ss_pred EeccccCCCCCCCCccEEEEEEEeCCCCEEEeCCCcEEEEEecCHHHHhCCCEEEeeCCCCC-EEEEECCccCCCcEEEE
Confidence 99999987 47789999999999999999995 89999999999999999999999999998 99999999999999999
Q ss_pred cCCCcCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHhCC
Q 022539 250 PNEGMPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALGG 292 (295)
Q Consensus 250 ~g~G~p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~~l~~~l~~ 292 (295)
+|+|||...+++.+|||||+|+|.||+.||++|+++|++++..
T Consensus 319 ~GkGmP~~~~~~~~GDL~V~~~V~~P~~Ls~~q~~~l~~l~~~ 361 (372)
T PRK14296 319 NNKGLYKSINKDKRGDLIIKVNIVVPKNLSKKEKELIEQIYEQ 361 (372)
T ss_pred cCCCCCcCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHHHhh
Confidence 9999996544567899999999999999999999999999853
No 4
>PTZ00037 DnaJ_C chaperone protein; Provisional
Probab=100.00 E-value=2.7e-67 Score=497.75 Aligned_cols=274 Identities=40% Similarity=0.673 Sum_probs=234.0
Q ss_pred CCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCccCCCC
Q 022539 2 GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASDFGT 81 (295)
Q Consensus 2 ~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~g~ 81 (295)
.+|||+||||+++||.+|||+|||+||++||||+|++ .++|++|++||+|||||.+|+.||+||++++.++.. +
T Consensus 27 ~~d~Y~vLGV~~~As~~eIKkAYrkla~k~HPDk~~~-----~e~F~~i~~AYevLsD~~kR~~YD~~G~~~~~~~~~-~ 100 (421)
T PTZ00037 27 NEKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGD-----PEKFKEISRAYEVLSDPEKRKIYDEYGEEGLEGGEQ-P 100 (421)
T ss_pred chhHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCch-----HHHHHHHHHHHHHhccHHHHHHHhhhcchhcccCCC-C
Confidence 4799999999999999999999999999999999863 489999999999999999999999999987763211 1
Q ss_pred CCCCCCCCCCccccCCCCCCCCCCCC-CCCCCCCCCeeeecccCHHHHhcCceeEEEEeEEeeC----------------
Q 022539 82 PSYHHPHDTKPCATRNNNNNNHRAGG-AGPKPTPTPIETQLLCTLEELYKGARKKMKISRVLPD---------------- 144 (295)
Q Consensus 82 ~~~~~~~~~~~f~~~~~~~~~f~~~~-~~~~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~---------------- 144 (295)
.. |. ..|.. .|++++ ...++++.|+.+.|.|||+|+|+|+++++.+.+.+.|
T Consensus 101 ~d-~~----d~f~~------~Fggg~~~~~~~rg~di~~~l~vtLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~C 169 (421)
T PTZ00037 101 AD-AS----DLFDL------IFGGGRKPGGKKRGEDIVSHLKVTLEQIYNGAMRKLAINKDVICANCEGHGGPKDAFVDC 169 (421)
T ss_pred cc-hh----hhHHH------hhccccccccccCCCCEEEEeeeeHHHHhCCCceEEEeeccccccccCCCCCCCCCCccC
Confidence 11 10 11211 122111 1234578999999999999999999999998764321
Q ss_pred ----CCC--------------------------c---------------EEEEEEEEEEEeCCCCcCCCeEecCCCCCCC
Q 022539 145 ----HFG--------------------------K---------------PITVQEILKIDIKPGWKKGTKITFPEKGNQE 179 (295)
Q Consensus 145 ----g~G--------------------------~---------------~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~ 179 (295)
|.| + ++.+.++++|.||||+++|++|+|+|+|++.
T Consensus 170 ~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~G~G~~i~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~dG~~I~~~G~Gd~~ 249 (421)
T PTZ00037 170 KLCNGQGIRVQIRQMGSMIHQTQSTCNSCNGQGKIIPESKKCKNCSGKGVKKTRKILEVNIDKGVPNQHKITFHGEADEK 249 (421)
T ss_pred CCCCCCCeEEEEEeecceeeEEEEeCCCCCCcceeccccccCCcCCCcceeeeeeEEEEeeCCCCCCCcEEEEecccCCC
Confidence 111 1 2445678999999999999999999999998
Q ss_pred CCCCCccEEEEEEEeCCcceeecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCC--CCCCcEEEEcCCCcCCC
Q 022539 180 PGLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDI--IQPGSEVVIPNEGMPIS 257 (295)
Q Consensus 180 ~~~~~GDliv~i~v~~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~--~~~g~~~rl~g~G~p~~ 257 (295)
+++.||||+|+|+++||+.|+|+|+||+++++|||++||+|+++.|+||||+.+.|+||++ +++|++++|+|+|||..
T Consensus 250 ~~~~pGDLiv~I~~~ph~~F~R~G~DL~~~~~Isl~eAllG~~i~I~tLdG~~l~I~ip~g~vt~pg~~~~I~geGmP~~ 329 (421)
T PTZ00037 250 PNEIPGNVVFILNEKPHDTFKREGGDLFITKKISLYEALTGFVFYITHLDGRKLLVNTPPGEVVKPGDIKVINNEGMPTY 329 (421)
T ss_pred CCCCCCcEEEEEEecCCCCcEEeCCeEEEEEeCCHHHHhcCCEEEeeCCCCCeEEEEeCCCcccCCCcEEEeCCCCcccC
Confidence 8889999999999999999999999999999999999999999999999998899999976 99999999999999976
Q ss_pred CCCCCCCCEEEEEEEECC--CCCCHHHHHHHHHHhCC
Q 022539 258 KDPSKKGNLIIKFDIMFP--SRLTAEQKSDLKRALGG 292 (295)
Q Consensus 258 ~~~~~~GDL~v~~~v~~P--~~l~~~~~~~l~~~l~~ 292 (295)
++++.+|||||+|+|.|| +.||++|+++|+++++.
T Consensus 330 ~~~~~rGDL~V~~~V~~P~~~~Ls~~qk~ll~~l~~~ 366 (421)
T PTZ00037 330 KSPFKKGNLYVTFEVIFPVDRKFTNEEKEILKSLFPQ 366 (421)
T ss_pred CCCCCCCCEEEEEEEEcCCCCCCCHHHHHHHHHhccC
Confidence 645578999999999999 99999999999999984
No 5
>PRK14286 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=7.1e-66 Score=483.63 Aligned_cols=289 Identities=30% Similarity=0.533 Sum_probs=236.1
Q ss_pred CCCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCccC--
Q 022539 1 MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASD-- 78 (295)
Q Consensus 1 m~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~-- 78 (295)
-.+|||+||||+++||.+|||+|||+||++||||+|+.+ ++|+++|++|++||+||+||.+|++||+||+++++.+.
T Consensus 2 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~~~~~ 80 (372)
T PRK14286 2 SERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGN-KESEEKFKEATEAYEILRDPKKRQAYDQFGKAGVNAGAGG 80 (372)
T ss_pred CCCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc-hHHHHHHHHHHHHHHHhccHHHHHHHHHhCchhhccccCC
Confidence 048999999999999999999999999999999999854 56899999999999999999999999999998876321
Q ss_pred CCCCCC--CCC--CCC-CccccCCCC-CCCCC-CCCCCCCCCCCCeeeecccCHHHHhcCceeEEEEeEEeeC----CC-
Q 022539 79 FGTPSY--HHP--HDT-KPCATRNNN-NNNHR-AGGAGPKPTPTPIETQLLCTLEELYKGARKKMKISRVLPD----HF- 146 (295)
Q Consensus 79 ~g~~~~--~~~--~~~-~~f~~~~~~-~~~f~-~~~~~~~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~----g~- 146 (295)
++.++| |+. .+. +.|..++++ .+..+ ++....+.+++|+++.|.|||+|+|+|+++++.+.|.+.| |+
T Consensus 81 ~~~~~~~~~~~~~~~~~d~f~~ffgg~~~~~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~k~i~~~r~~~C~~C~G~G 160 (372)
T PRK14286 81 FGQGAYTDFSDIFGDFGDIFGDFFGGGRGGGSGGGRRSGPQRGSDLRYNLEVSLEDAALGREYKIEIPRLESCVDCNGSG 160 (372)
T ss_pred CCCCCcccccccccchhhHHHHhhCCCccCCCcccccCCCCCCCCeeEEEEEEHHHHhCCeeEEEEeeccccCCCCcCCC
Confidence 111111 110 000 112111000 00000 0001234578999999999999999999999999875421 11
Q ss_pred --------------------------------------------------Cc-EEEEEEEEEEEeCCCCcCCCeEecCCC
Q 022539 147 --------------------------------------------------GK-PITVQEILKIDIKPGWKKGTKITFPEK 175 (295)
Q Consensus 147 --------------------------------------------------G~-~~~~~~~l~V~Ip~G~~~G~~i~~~g~ 175 (295)
|+ ++++.++++|.||||+++|++|+|+|+
T Consensus 161 ~~~~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~i~~~g~ 240 (372)
T PRK14286 161 ASKGSSPTTCPDCGGSGQIRRTQGFFSVATTCPTCRGKGTVISNPCKTCGGQGLQEKRRTINIKIPPGVETGSRLKVSGE 240 (372)
T ss_pred cCCCCCCccCCCCcCeEEEEEEeceEEEEEeCCCCCceeeEecccCCCCCCCcEEecceEEEEEECCCCCCCCEEEECCc
Confidence 11 345568999999999999999999999
Q ss_pred CCCCC-CCCCccEEEEEEEeCCcceeecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCCCCCCcEEEEcCCCc
Q 022539 176 GNQEP-GLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGM 254 (295)
Q Consensus 176 G~~~~-~~~~GDliv~i~v~~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~~~~g~~~rl~g~G~ 254 (295)
|++.+ +..+|||+|+|+++||+.|+|+|+||+++++|||++|++|+++.|+|+||++++|+||+++++|+++||+|+||
T Consensus 241 G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~i~v~ip~g~~~g~~~ri~G~G~ 320 (372)
T PRK14286 241 GEAGPNGGPHGDLYVVTHIKKHELFERQGNDLILVRKISLAQAILGAEIEVPTIDGKKAKMKIPEGTESGQVFRLKGHGM 320 (372)
T ss_pred cccCCCCCCCceEEEEEEEccCCCEEEecCCEEEEEEECHHHHhCCCEEEEeCCCCCEEEEEeCCccCCCcEEEECCCCC
Confidence 99876 45679999999999999999999999999999999999999999999999989999999999999999999999
Q ss_pred CCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHhC
Q 022539 255 PISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALG 291 (295)
Q Consensus 255 p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~~l~~~l~ 291 (295)
|..+ ...+|||||+|+|.||+.|+++|+++|++++.
T Consensus 321 P~~~-~~~~GDL~V~~~V~~P~~Ls~~qk~~l~~l~~ 356 (372)
T PRK14286 321 PYLG-AYGKGDQHVIVKIEIPKKITRRQRELIEEFAR 356 (372)
T ss_pred CCCC-CCCCCcEEEEEEEECCCCCCHHHHHHHHHHHH
Confidence 9765 34689999999999999999999999999986
No 6
>PRK14278 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=5.5e-65 Score=478.55 Aligned_cols=280 Identities=30% Similarity=0.496 Sum_probs=233.9
Q ss_pred CCCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCccCCC
Q 022539 1 MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASDFG 80 (295)
Q Consensus 1 m~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~g 80 (295)
|.+|||+||||+++||.+|||+|||+||++||||+|++ ++|+++|++|++||+||+||.+|++||+||+++..+++.+
T Consensus 1 m~~d~y~iLgv~~~a~~~eik~ayr~la~~~hpD~~~~--~~a~~~f~~i~~Ay~vL~d~~~r~~YD~~G~~~~~~~~~~ 78 (378)
T PRK14278 1 MARDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPD--EEAQEKFKEISVAYEVLSDPEKRRIVDLGGDPLESAGGGG 78 (378)
T ss_pred CCCCcceecCCCCCCCHHHHHHHHHHHHHHHCCCCCCc--HHHHHHHHHHHHHHHHhchhhhhhhhhccCCccccccCCC
Confidence 88999999999999999999999999999999999984 5789999999999999999999999999998643321100
Q ss_pred CCCC---CCCCCCCccccCCCCCCCCCCCC-----CCCCCCCCCeeeecccCHHHHhcCceeEEEEeEEeeC--------
Q 022539 81 TPSY---HHPHDTKPCATRNNNNNNHRAGG-----AGPKPTPTPIETQLLCTLEELYKGARKKMKISRVLPD-------- 144 (295)
Q Consensus 81 ~~~~---~~~~~~~~f~~~~~~~~~f~~~~-----~~~~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~-------- 144 (295)
++| |.+. .+.|.. .|++++ ...++++.|+++.|.|||+|+|+|+++++.+.+.+.|
T Consensus 79 -~g~~~~f~~~-~d~f~~------ffgg~g~~~~~~~~~~~g~d~~~~l~vtLee~~~G~~~~i~~~~~~~C~~C~G~G~ 150 (378)
T PRK14278 79 -GGFGGGFGGL-GDVFEA------FFGGGAASRGPRGRVRPGSDSLLRMRLDLEECATGVTKQVTVDTAVLCDRCHGKGT 150 (378)
T ss_pred -CCCCcCcCch-hHHHHH------HhCCCCCCCCCccCCCCCCCeEEEEEEEHHHhcCCeEEEEEEEeeccCCCCcCccC
Confidence 111 1110 011211 122111 0134578999999999999999999999999875421
Q ss_pred -------------CCCc---------------------------------------EEEEEEEEEEEeCCCCcCCCeEec
Q 022539 145 -------------HFGK---------------------------------------PITVQEILKIDIKPGWKKGTKITF 172 (295)
Q Consensus 145 -------------g~G~---------------------------------------~~~~~~~l~V~Ip~G~~~G~~i~~ 172 (295)
|+|. ++.+.++++|.||||+++|++|+|
T Consensus 151 ~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~ 230 (378)
T PRK14278 151 AGDSKPVTCDTCGGRGEVQTVQRSFLGQVMTSRPCPTCRGVGEVIPDPCHECAGDGRVRARREITVKIPAGVGDGMRIRL 230 (378)
T ss_pred CCCCCceecCCccCceEEEEEEeccceeEEEEEECCCCCccceeeCCCCCCCCCceeEecceEEEEEECCCCCCCcEEEE
Confidence 1111 235567999999999999999999
Q ss_pred CCCCCCCCC-CCCccEEEEEEEeCCcceeecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCCCCCCcEEEEcC
Q 022539 173 PEKGNQEPG-LPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPN 251 (295)
Q Consensus 173 ~g~G~~~~~-~~~GDliv~i~v~~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~~~~g~~~rl~g 251 (295)
+|+|++.++ ..+|||+|+|+++||+.|+|+|+||+++++|||.+|++|+++.|+|+|+.++.|+||+++++|++++|+|
T Consensus 231 ~g~G~~~~~~~~~GDL~v~i~~~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tld~~~i~v~ip~g~~~g~~lrl~g 310 (378)
T PRK14278 231 AAQGEVGPGGGPAGDLYVEVHEQPHDVFVRDGDDLHCTVSVPMVDAALGTTVTVEAILDGPSEITIPPGTQPGSVITLRG 310 (378)
T ss_pred ccCcCCCCCCCCCCCEEEEEEECcCCCEEEcCCCEEEEEecCHHHHhcCCeEEEecCCCCeEEEEeCCCcCCCcEEEECC
Confidence 999999864 5679999999999999999999999999999999999999999999977679999999999999999999
Q ss_pred CCcCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHhC
Q 022539 252 EGMPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALG 291 (295)
Q Consensus 252 ~G~p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~~l~~~l~ 291 (295)
+|||... ...+|||||+|+|.||+.||++|+++|+++++
T Consensus 311 ~G~p~~~-~~~~GDL~V~~~V~~P~~Ls~~qk~~l~~~~~ 349 (378)
T PRK14278 311 RGMPHLR-SGGRGDLHAHVEVVVPTRLDHEDIELLRELKA 349 (378)
T ss_pred CCCCCCC-CCCCCCEEEEEEEEcCCCCCHHHHHHHHHHHh
Confidence 9999765 35689999999999999999999999999985
No 7
>PRK14279 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=6.1e-65 Score=480.01 Aligned_cols=287 Identities=28% Similarity=0.457 Sum_probs=233.5
Q ss_pred CCCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCcc---
Q 022539 1 MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKAS--- 77 (295)
Q Consensus 1 m~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~--- 77 (295)
|.+|||+||||+++||.+|||+|||+||++||||+|+++ ++|+++|++|++||+|||||+||++||+||+++...+
T Consensus 7 ~~~Dyy~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~vLsD~~KR~~YD~~G~~~~~~g~~~ 85 (392)
T PRK14279 7 VEKDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGD-PAAEERFKAVSEAHDVLSDPAKRKEYDETRRLFAGGGFGG 85 (392)
T ss_pred cccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCC-hHHHHHHHHHHHHHHHhcchhhhhHHHHhhhhcccccccc
Confidence 468999999999999999999999999999999999854 5789999999999999999999999999997532211
Q ss_pred -CC---CC-CCC-CC----CCCC-Ccccc----CCCC----CCC-CCCCC----CCCCCCCCCeeeecccCHHHHhcCce
Q 022539 78 -DF---GT-PSY-HH----PHDT-KPCAT----RNNN----NNN-HRAGG----AGPKPTPTPIETQLLCTLEELYKGAR 133 (295)
Q Consensus 78 -~~---g~-~~~-~~----~~~~-~~f~~----~~~~----~~~-f~~~~----~~~~~~~~di~~~l~itl~e~~~G~~ 133 (295)
.+ ++ ++| ++ ..+. ..|+. .+++ |+. |++++ ...+++++|+++.|.|||+|+|+|++
T Consensus 86 ~~~~~~~~~~g~~~~~~~~~~d~~~~f~~~~~~~~~~f~d~f~~~fg~~~~~~~~~~~~~g~di~~~l~ltLee~~~G~~ 165 (392)
T PRK14279 86 RRFDGGGGFGGFGTGGDGAEFNLNDLFDAAGRGGGGGIGDLFGGLFNRGGGSARPSRPRRGNDLETETTLDFVEAAKGVT 165 (392)
T ss_pred ccccCCCCCCCccccccccCcChhhhhcccccccccchhhhhhhhhcCCCcccccCCCCCCCCeEEEEEEEHHHHhCCeE
Confidence 00 00 111 00 0010 11210 0001 111 22111 12345789999999999999999999
Q ss_pred eEEEEeEEeeC----C---------------------------------------------------CCc-EEEEEEEEE
Q 022539 134 KKMKISRVLPD----H---------------------------------------------------FGK-PITVQEILK 157 (295)
Q Consensus 134 k~i~~~r~~~~----g---------------------------------------------------~G~-~~~~~~~l~ 157 (295)
+++.+.+.+.| | .|+ ++.+.++++
T Consensus 166 ~~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~g~v~~~~~~~ 245 (392)
T PRK14279 166 MPLRLTSPAPCTTCHGSGARPGTSPKVCPTCNGSGVISRNQGAFGFSEPCTDCRGTGSIIEDPCEECKGTGVTTRTRTIN 245 (392)
T ss_pred EEEeeeccccCCCCccccccCCCCCCCCCCCcceEEEEEEecceEEEEecCCCCceeEEeCCcCCCCCCCeEEEEeeeeE
Confidence 99999775321 1 111 456678999
Q ss_pred EEeCCCCcCCCeEecCCCCCCCC-CCCCccEEEEEEEeCCcceeecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEe
Q 022539 158 IDIKPGWKKGTKITFPEKGNQEP-GLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLP 236 (295)
Q Consensus 158 V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDliv~i~v~~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~ 236 (295)
|.||||+++|++|+|+|+|++.+ +..+|||+|+|+++||+.|+|+|+||+++++|||.+|++|+++.|+|+||+ +.|+
T Consensus 246 V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~~ldg~-i~v~ 324 (392)
T PRK14279 246 VRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKVFGRDGDDLTVTVPVSFTELALGSTLSVPTLDGP-VGVK 324 (392)
T ss_pred EEeCCCCCCCcEEEEeCCccCCCCCCCCCCEEEEEEEecCCcceeecCcEEEEEEccHHHHcCCceEEEEcCCce-EEEE
Confidence 99999999999999999999976 456799999999999999999999999999999999999999999999997 8999
Q ss_pred eCCCCCCCcEEEEcCCCcCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHhC
Q 022539 237 VTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALG 291 (295)
Q Consensus 237 i~~~~~~g~~~rl~g~G~p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~~l~~~l~ 291 (295)
||+++++|+++||+|+|||... +.+|||||+|+|.||+.|+++|+++|++++.
T Consensus 325 Ip~g~~~g~~iri~g~G~p~~~--~~~GDL~I~~~v~~P~~Ls~~q~~~l~~~~~ 377 (392)
T PRK14279 325 VPAGTADGRILRVRGRGVPKRS--GGAGDLLVTVKVAVPPNLDGAAAEALEAYAE 377 (392)
T ss_pred ECCCCCCCCEEEECCCCCCCCC--CCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence 9999999999999999999643 5689999999999999999999999999986
No 8
>PRK14295 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.5e-64 Score=476.91 Aligned_cols=286 Identities=28% Similarity=0.485 Sum_probs=237.0
Q ss_pred CCCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccC----CCCCCCCc
Q 022539 1 MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDL----YGPEGLKA 76 (295)
Q Consensus 1 m~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~----~g~~~~~~ 76 (295)
|.+|||+||||+++||.+|||+|||+||++||||+|+.+ .+|+++|++|++||+||+||.+|++||+ ||++++..
T Consensus 7 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~~~~~G~~g~~~ 85 (389)
T PRK14295 7 IEKDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGD-AKAEERFKEISEAYDVLSDEKKRKEYDEARSLFGNGGFRP 85 (389)
T ss_pred cccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCc-hhHHHHHHHHHHHHHHHCchhhHHHHHHHHhhhccccccc
Confidence 578999999999999999999999999999999999754 4689999999999999999999999999 99988763
Q ss_pred cCC-C-CCCC-CCCCCCCcccc---------CCC----CCCC-CCCCC-CCCCCCCCCeeeecccCHHHHhcCceeEEEE
Q 022539 77 SDF-G-TPSY-HHPHDTKPCAT---------RNN----NNNN-HRAGG-AGPKPTPTPIETQLLCTLEELYKGARKKMKI 138 (295)
Q Consensus 77 ~~~-g-~~~~-~~~~~~~~f~~---------~~~----~~~~-f~~~~-~~~~~~~~di~~~l~itl~e~~~G~~k~i~~ 138 (295)
+.. + +++| |+.. +.|+. .++ .|+. |++++ ...++++.|+++.|.|||+|+|+|++++|.+
T Consensus 86 ~~~~~~~~~~~~~~~--~~f~~~~~~~~~~~~~~~f~d~f~~~fg~~~~~~~~~~g~di~~~l~lsLee~~~G~~k~i~~ 163 (389)
T PRK14295 86 GPGGGGGGGFNFDLG--DLFGGGAQGGGGAGGGGGLGDVFGGLFNRGGRRTQPRRGADVESEVTLSFTEAIDGATVPLRL 163 (389)
T ss_pred CCCCCCCCCCCcccc--cccccccccccccccccchhhhhcccccCCCCCCCCCCCCCEEEEEEEEHHHHhCCceEEEEe
Confidence 211 1 1121 1110 11110 000 0111 22211 1334578999999999999999999999999
Q ss_pred eEEeeC----C---------------------------------------------------CCc-EEEEEEEEEEEeCC
Q 022539 139 SRVLPD----H---------------------------------------------------FGK-PITVQEILKIDIKP 162 (295)
Q Consensus 139 ~r~~~~----g---------------------------------------------------~G~-~~~~~~~l~V~Ip~ 162 (295)
.+.+.| | .|+ ++.+.++++|.||+
T Consensus 164 ~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~~~~~~~l~V~Ip~ 243 (389)
T PRK14295 164 TSQAPCPACSGTGAKNGTTPRVCPTCSGTGQVSRNSGGFSLSEPCPDCKGRGLIADDPCLVCKGSGRAKSSRTMQVRIPA 243 (389)
T ss_pred eccccCCCCcccccCCCCCCcCCCCCCCEeEEEEEecceEEEEecCCCcceeEEeccCCCCCCCCceEeeeeEEEEEeCC
Confidence 875321 1 111 34567899999999
Q ss_pred CCcCCCeEecCCCCCCCC-CCCCccEEEEEEEeCCcceeecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCCC
Q 022539 163 GWKKGTKITFPEKGNQEP-GLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDII 241 (295)
Q Consensus 163 G~~~G~~i~~~g~G~~~~-~~~~GDliv~i~v~~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~~ 241 (295)
|+++|++|+|+|+|++.+ +..+|||+|+|+++||+.|+|+|+||+++++|||++|++|++++|+|+||+++.|+||+++
T Consensus 244 G~~~G~~i~l~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~I~tldG~~~~v~ip~g~ 323 (389)
T PRK14295 244 GVSDGQRIRLRGKGAPGERGGPAGDLYVVVHVDPHPVFGRSGDNLTVTVPVTFPEAALGAEVRVPTLGGPPVTVKLPPGT 323 (389)
T ss_pred CCCCCCEEEEcccccCCCCCCCCccEEEEEEEecCCCEEEecCCEEEEEeecHHHHhCCCeEEEECCCCCEEEEEECCcc
Confidence 999999999999999864 5678999999999999999999999999999999999999999999999988999999999
Q ss_pred CCCcEEEEcCCCcCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHhC
Q 022539 242 QPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALG 291 (295)
Q Consensus 242 ~~g~~~rl~g~G~p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~~l~~~l~ 291 (295)
++|++++|+|+|||... +.+|||||+|+|.||+.||++|+++|++++.
T Consensus 324 ~~g~~iri~G~G~p~~~--~~~GDL~i~~~v~~P~~Ls~~qk~~l~~l~~ 371 (389)
T PRK14295 324 PNGRVLRVRGKGAVRKD--GTRGDLLVTVEVAVPKDLSGKAREALEAFRE 371 (389)
T ss_pred CCCcEEEECCCCcCCCC--CCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence 99999999999999643 5689999999999999999999999999986
No 9
>PRK14298 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.1e-64 Score=475.92 Aligned_cols=279 Identities=32% Similarity=0.492 Sum_probs=234.5
Q ss_pred CCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCccCCCC
Q 022539 2 GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASDFGT 81 (295)
Q Consensus 2 ~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~g~ 81 (295)
.+|||+||||+++||.+|||+|||+||++||||+|++ .+|+++|++|++||++|+||.+|+.||+||+++++.+..+.
T Consensus 4 ~~d~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~--~~~~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~~~~~~ 81 (377)
T PRK14298 4 TRDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKE--PDAEEKFKEISEAYAVLSDAEKRAQYDRFGHAGIDNQYSAE 81 (377)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHhCccccCC--hhHHHHHHHHHHHHHHhcchHhhhhhhhcCccccccccCcc
Confidence 3799999999999999999999999999999999975 46889999999999999999999999999998876321110
Q ss_pred CCCCCCCC----CCccccCCCCCCCCCCCC---CCCCCCCCCeeeecccCHHHHhcCceeEEEEeEEeeC----C-----
Q 022539 82 PSYHHPHD----TKPCATRNNNNNNHRAGG---AGPKPTPTPIETQLLCTLEELYKGARKKMKISRVLPD----H----- 145 (295)
Q Consensus 82 ~~~~~~~~----~~~f~~~~~~~~~f~~~~---~~~~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~----g----- 145 (295)
.+ |...+ .+.|.. .|++++ ...++++.|+++.|.|||+|+|+|+++++.+.+.+.| |
T Consensus 82 ~~-~~~~~~~~~~d~f~~------~Fgg~~~~~~~~~~~g~di~~~l~vslee~~~G~~~~i~~~r~~~C~~C~G~G~~~ 154 (377)
T PRK14298 82 DI-FRGADFGGFGDIFEM------FFGGGGRRGRMGPRRGSDLRYDLYITLEEAAFGVRKDIDVPRAERCSTCSGTGAKP 154 (377)
T ss_pred cc-cccCCcCcchhhhHh------hhcCCCccCCCCCCCCCCEEEEEEEEHHHhhCCeEEEEEEEeeccCCCCCCCcccC
Confidence 00 11000 011211 122211 1234678999999999999999999999999876432 1
Q ss_pred ------------CCc---------------------------------------EEEEEEEEEEEeCCCCcCCCeEecCC
Q 022539 146 ------------FGK---------------------------------------PITVQEILKIDIKPGWKKGTKITFPE 174 (295)
Q Consensus 146 ------------~G~---------------------------------------~~~~~~~l~V~Ip~G~~~G~~i~~~g 174 (295)
.|. ++.+.++++|.||||+++|++|+|+|
T Consensus 155 ~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~IppG~~~G~~i~~~g 234 (377)
T PRK14298 155 GTSPKRCPTCGGTGQVTTTRSTPLGQFVTTTTCSTCHGRGQVIESPCPVCSGTGKVRKTRKITVNVPAGADSGLRLKLSG 234 (377)
T ss_pred CCCCCcCCCCCCccEEEEEEecCceeEEEEEeCCCCCCCCcccCCCCCCCCCccEEEEEEEEEecCCCCCCCCCEEEEec
Confidence 111 34566899999999999999999999
Q ss_pred CCCCC-CCCCCccEEEEEEEeCCcceeecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCCCCCCcEEEEcCCC
Q 022539 175 KGNQE-PGLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEG 253 (295)
Q Consensus 175 ~G~~~-~~~~~GDliv~i~v~~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~~~~g~~~rl~g~G 253 (295)
+|++. .++.+|||+|+|+++||+.|+|+|+||+++++|||.+|++|+++.|+|+||+ +.|+||+++++|++++|+|+|
T Consensus 235 ~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~-i~v~ip~g~~~g~~lri~g~G 313 (377)
T PRK14298 235 EGEAGSPGAPSGDLYIVLHVKEHDYFERVGDDIISEIPISFTQAALGADIMVPTLYGK-VKMNIPPGTQTHSVFRLKDKG 313 (377)
T ss_pred ccCCCCCCCCCcCEEEEEEEecCCCeEEEcCcEEEEEEeCHHHHhCCCeEEEecCCCC-EEEEeCCCcccCCEEEECCCC
Confidence 99986 5678999999999999999999999999999999999999999999999997 899999999999999999999
Q ss_pred cCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHhC
Q 022539 254 MPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALG 291 (295)
Q Consensus 254 ~p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~~l~~~l~ 291 (295)
||..+ ...+|||||+|+|.+|+.|+++++++|++++.
T Consensus 314 ~p~~~-~~~~GDL~V~~~V~~P~~ls~~~~~ll~~l~~ 350 (377)
T PRK14298 314 MPRLH-GHGKGDQLVKVIVKTPTKLTQEQKELLREFDE 350 (377)
T ss_pred CCCCC-CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence 99765 34689999999999999999999999999984
No 10
>PRK14285 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.9e-64 Score=472.81 Aligned_cols=288 Identities=28% Similarity=0.479 Sum_probs=238.1
Q ss_pred CCCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCccC-C
Q 022539 1 MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASD-F 79 (295)
Q Consensus 1 m~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~-~ 79 (295)
|.+|||++|||+++||.+|||+|||+||++||||+|+.+ ++|.++|++|++||++|+||.+|+.||+||++++++++ +
T Consensus 1 m~~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~vL~d~~kr~~yd~~g~~~~~~~~~~ 79 (365)
T PRK14285 1 MKRDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGN-KEAESIFKEATEAYEVLIDDNKRAQYDRFGHTAFEGGGGF 79 (365)
T ss_pred CCCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC-HHHHHHHHHHHHHHHHHcCcchhHHHHhcCcchhccCCCc
Confidence 789999999999999999999999999999999999864 56889999999999999999999999999998876431 1
Q ss_pred CC--CCCCCCCCCCccccCCCCC-CCCCCC--C--CCCCCCCCCeeeecccCHHHHhcCceeEEEEeEEeeC----C---
Q 022539 80 GT--PSYHHPHDTKPCATRNNNN-NNHRAG--G--AGPKPTPTPIETQLLCTLEELYKGARKKMKISRVLPD----H--- 145 (295)
Q Consensus 80 g~--~~~~~~~~~~~f~~~~~~~-~~f~~~--~--~~~~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~----g--- 145 (295)
++ ++ |++.. ..|+.+..-| +.|+++ + ...+.++.|+.+.|.|||+|+|+|+++++.+.|.+.| |
T Consensus 80 ~~~~~g-~~~~~-~~~~~~~d~f~~~fgg~~~~~~~~~~~~g~di~~~l~vtlee~~~G~~~~i~~~r~~~C~~C~G~G~ 157 (365)
T PRK14285 80 EGFSGG-FSGFS-DIFEDFGDIFDSFFTGNRGQDKNRKHEKGQDLTYQIEISLEDAYLGYKNNINITRNMLCESCLGKKS 157 (365)
T ss_pred cccCCC-ccccc-cccccHHHHHHHhhcCCcCCCCCcCCCCCCCEEEEEEEEHHHhhCCeEEEEEeeecccCCCCCCccc
Confidence 11 11 11000 0010000001 112221 1 1224578999999999999999999999999876431 1
Q ss_pred --------------CC-----------------------------------cEEEEEEEEEEEeCCCCcCCCeEecCCCC
Q 022539 146 --------------FG-----------------------------------KPITVQEILKIDIKPGWKKGTKITFPEKG 176 (295)
Q Consensus 146 --------------~G-----------------------------------~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G 176 (295)
.| .++.+.++++|.||||+++|++|+|+|+|
T Consensus 158 ~~~~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G 237 (365)
T PRK14285 158 EKGTSPSICNMCNGSGRVMQGGGFFRVTTTCPKCYGNGKIISNPCKSCKGKGSLKKKETIELKIPAGIDDNQQIKMRGKG 237 (365)
T ss_pred CCCCCCccCCCccCceeEEecCceeEEeeecCCCCCcccccCCCCCCCCCCCEEeccEEEEEEECCCCCCCCEEEEeecc
Confidence 11 03556789999999999999999999999
Q ss_pred CCCCC-CCCccEEEEEEEeCCcceeecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCCCCCCcEEEEcCCCcC
Q 022539 177 NQEPG-LPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGMP 255 (295)
Q Consensus 177 ~~~~~-~~~GDliv~i~v~~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~~~~g~~~rl~g~G~p 255 (295)
++.++ ..+|||+|+|++++|+.|+|+|+||+++++|||.+|++|+++.|+|+||++++|+||+++++|++++|+|+|||
T Consensus 238 ~~~~~~~~~GDL~v~i~v~~h~~f~R~G~dL~~~~~Isl~eAl~G~~~~i~tldG~~v~V~Ip~g~~~g~~irl~GkG~p 317 (365)
T PRK14285 238 SVNPDNQQYGDLYIKILIKPHKIFKRNGKDLYATLPISFTQAALGKEIKIQTIASKKIKIKIPKGTENDEQIIIKNEGMP 317 (365)
T ss_pred ccCCCCCCCCCEEEEEEEecCCCeEEeccceEEEEecCHHHHhCCCEEEEECCCCCEEEEEeCCCcCCCcEEEECCCCcc
Confidence 99864 56899999999999999999999999999999999999999999999998899999999999999999999999
Q ss_pred CCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHhCC
Q 022539 256 ISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALGG 292 (295)
Q Consensus 256 ~~~~~~~~GDL~v~~~v~~P~~l~~~~~~~l~~~l~~ 292 (295)
..+. ..+|||||+|+|.+|+.|+++++++|++++..
T Consensus 318 ~~~~-~~~GDL~V~~~v~~P~~l~~~q~~~l~~l~~~ 353 (365)
T PRK14285 318 ILHT-EKFGNLILIIKIKTPKNLNSNAIKLLENLSKE 353 (365)
T ss_pred CCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHHH
Confidence 7652 45799999999999999999999999999863
No 11
>PRK14282 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=4.7e-64 Score=471.36 Aligned_cols=288 Identities=30% Similarity=0.485 Sum_probs=236.6
Q ss_pred CCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCcc--C-
Q 022539 2 GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKAS--D- 78 (295)
Q Consensus 2 ~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~--~- 78 (295)
.+|||+||||+++||.+|||+|||+||++||||+|+.+..+|+++|++|++||++|+||.+|+.||+||++++... .
T Consensus 3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~g~~~~~~~~~~~ 82 (369)
T PRK14282 3 KKDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGYVGEQPPYQET 82 (369)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCccchhHHHHHHHHHHHHHHHhcChhhHHHHhhcCccccccccccC
Confidence 4799999999999999999999999999999999986545689999999999999999999999999998876521 1
Q ss_pred CCCCCCCCCC--CC-CccccCCCCC-CCCCCC-C----CCCCCCCCCeeeecccCHHHHhcCceeEEEEeEEeeC-----
Q 022539 79 FGTPSYHHPH--DT-KPCATRNNNN-NNHRAG-G----AGPKPTPTPIETQLLCTLEELYKGARKKMKISRVLPD----- 144 (295)
Q Consensus 79 ~g~~~~~~~~--~~-~~f~~~~~~~-~~f~~~-~----~~~~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~----- 144 (295)
.++++||+.. +. .+|.+ .-| +.|+++ + ...+++++|+.+.|.|||+|+|+|+++++.+.|.+.|
T Consensus 83 ~~~g~~~~~~~~~~~~~~~~--d~f~~~fgg~~~~~~~~~~~~~g~di~~~l~~slee~~~G~~~~i~~~r~~~C~~C~G 160 (369)
T PRK14282 83 ESGGGFFEDIFKDFENIFNR--DIFDIFFGERRTQEEQREYARRGEDIRYEIEVTLSDLINGAEIPVEYDRYETCPHCGG 160 (369)
T ss_pred CCCCcccccccccccccccc--hhhhHhhcccCCcccccCCCCCCCCeEEEEEEEHHHhcCCeEEEEEeeecccCCCCCc
Confidence 1111222110 00 00100 001 112211 1 1234578999999999999999999999999875321
Q ss_pred ----------------CCC--------------------------------------c-EEEEEEEEEEEeCCCCcCCCe
Q 022539 145 ----------------HFG--------------------------------------K-PITVQEILKIDIKPGWKKGTK 169 (295)
Q Consensus 145 ----------------g~G--------------------------------------~-~~~~~~~l~V~Ip~G~~~G~~ 169 (295)
|.| + ++.+.++++|.||||+++|++
T Consensus 161 ~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~ 240 (369)
T PRK14282 161 TGVEPGSGYVTCPKCHGTGRIREERRSFFGVFVSERTCERCGGTGKIPGEYCHECGGSGRIRRRVRTTVKIPAGVEDGTV 240 (369)
T ss_pred cCCCCCCCCcCCCCCCCcCEEEEEEEccCcceEEEEECCCCCCcceeCCCCCCCCCCceeEEEEEEEEEEeCCCCCCCCE
Confidence 111 1 345568999999999999999
Q ss_pred EecCCCCCCCC-CCCCccEEEEEEEeCCcceeecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCCCCCCcEEE
Q 022539 170 ITFPEKGNQEP-GLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVV 248 (295)
Q Consensus 170 i~~~g~G~~~~-~~~~GDliv~i~v~~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~~~~g~~~r 248 (295)
|+|+|+|++.+ +..+|||+|+|+++||+.|+|+|+||+++++|||.||++|+++.|+|+||++++|+||+++++|++++
T Consensus 241 i~~~g~G~~~~~~~~~GDl~i~i~v~~h~~F~r~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~~i~v~Ip~g~~~g~~ir 320 (369)
T PRK14282 241 LRITGGGNAGYYGGPYGDLYVIVRVRPDPRFKRSGSDLIYDVTIDYLQAILGTTVEVPLPEGGTTMLKIPPGTQPETVFR 320 (369)
T ss_pred EEEecccCCCCCCCCCCCEEEEEEEecCCcEEEecCCEEEEEEeCHHHHhCCCEEEEeCCCCcEEEEEeCCCcCCCCEEE
Confidence 99999999864 56789999999999999999999999999999999999999999999999889999999999999999
Q ss_pred EcCCCcCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHhCC
Q 022539 249 IPNEGMPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALGG 292 (295)
Q Consensus 249 l~g~G~p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~~l~~~l~~ 292 (295)
|+|+|||... .+.+|||||+|+|.+|+.|+.+++++|++++..
T Consensus 321 i~GkG~p~~~-~~~~GDL~V~~~v~~P~~l~~~~~~ll~~l~~~ 363 (369)
T PRK14282 321 LKGKGLPNMR-YGRRGDLIVNVHVEIPKRLSREERKLLKELAKK 363 (369)
T ss_pred ECCCCCCCCC-CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHh
Confidence 9999999654 246899999999999999999999999999864
No 12
>PRK14277 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2.6e-64 Score=475.41 Aligned_cols=285 Identities=32% Similarity=0.531 Sum_probs=235.2
Q ss_pred CCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCccCCCC
Q 022539 2 GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASDFGT 81 (295)
Q Consensus 2 ~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~g~ 81 (295)
.+|||+||||+++||.+|||+|||+||++||||+|+++ ++|+++|++|++||+||+||.+|+.||+||+++++.+++++
T Consensus 4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~~~~~~~~ 82 (386)
T PRK14277 4 KKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGD-KEAEQKFKEINEAYEILSDPQKRAQYDQFGHAAFDPGGFGQ 82 (386)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCc-hHHHHHHHHHHHHHHHhCCHHHHHHHHhhcccccccccccc
Confidence 47999999999999999999999999999999999854 46889999999999999999999999999998876432111
Q ss_pred -----CCC----CCC--CCC-CccccCCCCCCCCCCCC---CCCCCCCCCeeeecccCHHHHhcCceeEEEEeEEeeC--
Q 022539 82 -----PSY----HHP--HDT-KPCATRNNNNNNHRAGG---AGPKPTPTPIETQLLCTLEELYKGARKKMKISRVLPD-- 144 (295)
Q Consensus 82 -----~~~----~~~--~~~-~~f~~~~~~~~~f~~~~---~~~~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~-- 144 (295)
++| |+. .+. +.|..+.+ +.|++++ ...+.++.|+++.|.|||+|+|+|+++++.+.|.+.|
T Consensus 83 ~~~~~~g~~~~~~~~~~~~~~d~f~~~F~--~~fgg~~~~~~~~~~kg~di~~~l~vtLee~~~G~~~~v~~~r~~~C~~ 160 (386)
T PRK14277 83 GGFGQGGFGGGGFDFDFGGFGDIFEDIFG--DFFGTGRRRAETGPQKGADIRYDLELTFEEAAFGTEKEIEVERFEKCDV 160 (386)
T ss_pred CCcCCCCccccCccccccchhHHHHHhhc--ccccCCCcCCCCCCCCCCCEEEEEEEEHHHHhCCeEEEEEEEeeccCCC
Confidence 111 100 000 11111100 0122211 1224578999999999999999999999999876532
Q ss_pred --CCC--------------------------------------------------------cEEEEEEEEEEEeCCCCcC
Q 022539 145 --HFG--------------------------------------------------------KPITVQEILKIDIKPGWKK 166 (295)
Q Consensus 145 --g~G--------------------------------------------------------~~~~~~~~l~V~Ip~G~~~ 166 (295)
|+| .++.+.++++|.||||+++
T Consensus 161 C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~ 240 (386)
T PRK14277 161 CKGSGAKPGSKPVTCPVCHGTGQVRTRQNTPFGRIVNIRTCDRCHGEGKIITDPCNKCGGTGRIRRRRKIKVNIPAGIDD 240 (386)
T ss_pred CCCCCcCCCCCCccCCCCCCEEEEEEEEeccCceEEEEEECCCCCcceeeccCCCCCCCCCcEEeeeeEEEEecCCCccC
Confidence 111 0345667899999999999
Q ss_pred CCeEecCCCCCCCC-CCCCccEEEEEEEeCCcceeecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCCCCCCc
Q 022539 167 GTKITFPEKGNQEP-GLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGS 245 (295)
Q Consensus 167 G~~i~~~g~G~~~~-~~~~GDliv~i~v~~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~~~~g~ 245 (295)
|++|+|+|+|++.+ +..+|||+|+|+++||+.|+|+|+||+++++|||++|++|+++.|+|+||+ +.|+||+++++|+
T Consensus 241 G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~-~~v~ip~g~~~g~ 319 (386)
T PRK14277 241 GQMITLRGEGEPGIKGGPNGDLYIVIKVKPHPLFKREGYNVYLEMPITFTDAALGGEIEIPTLDGK-VKFTIPEGTQTGT 319 (386)
T ss_pred CcEEEEccccccCCCCCCCccEEEEEEEecCCCeEEecCCEEEEEEcCHHHHhCCCEEEEEcCCCC-EEEEECCCCCCCC
Confidence 99999999999864 567899999999999999999999999999999999999999999999998 8999999999999
Q ss_pred EEEEcCCCcCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHhC
Q 022539 246 EVVIPNEGMPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALG 291 (295)
Q Consensus 246 ~~rl~g~G~p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~~l~~~l~ 291 (295)
+++|+|+|||..+. ..+|||||+|+|.||+.||++|+++|++++.
T Consensus 320 ~~ri~g~G~p~~~~-~~~GDL~v~~~V~~P~~Ls~~qk~~l~~l~~ 364 (386)
T PRK14277 320 KFRLRGKGIPHLRG-RGRGDQIVKVYIEVPKKLTEKQKELLREFEK 364 (386)
T ss_pred EEEECCCCCCCCCC-CCCCCEEEEEEEEeCCCCCHHHHHHHHHHHh
Confidence 99999999997653 4689999999999999999999999999984
No 13
>PRK14287 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=4.1e-64 Score=471.58 Aligned_cols=279 Identities=27% Similarity=0.482 Sum_probs=233.1
Q ss_pred CCCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCccCCC
Q 022539 1 MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASDFG 80 (295)
Q Consensus 1 m~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~g 80 (295)
-.+|||++|||+++||.+|||+|||+||++||||+|++ ++|+++|++|++||++|+||.+|++||+||+++++.+..+
T Consensus 2 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~--~~~~~~f~~i~~Ay~~L~d~~kR~~YD~~G~~~~~~~~~~ 79 (371)
T PRK14287 2 SKRDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKA--PDAEDKFKEVKEAYDTLSDPQKKAHYDQFGHTDPNQGFGG 79 (371)
T ss_pred CCCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--hhHHHHHHHHHHHHHHhCcHhHHHHHHhhCCcccccccCC
Confidence 03799999999999999999999999999999999974 4688999999999999999999999999999887632111
Q ss_pred -C-CCCCCCCCCCccccCCCCCCCCCCCC----CCCCCCCCCeeeecccCHHHHhcCceeEEEEeEEeeC----CC----
Q 022539 81 -T-PSYHHPHDTKPCATRNNNNNNHRAGG----AGPKPTPTPIETQLLCTLEELYKGARKKMKISRVLPD----HF---- 146 (295)
Q Consensus 81 -~-~~~~~~~~~~~f~~~~~~~~~f~~~~----~~~~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~----g~---- 146 (295)
+ ++ |++. .+.|.. .|++++ ...+.++.|+++.|.|||+|+|+|+++++.+.|.+.| |+
T Consensus 80 ~~~~~-f~~~-~d~f~~------~fgg~~~~~~~~~~~~g~d~~~~l~vslee~~~G~~~~i~~~r~~~C~~C~G~G~~~ 151 (371)
T PRK14287 80 GGAGD-FGGF-SDIFDM------FFGGGGGRRNPNAPRQGADLQYTMTLEFKEAVFGKETEIEIPREETCGTCHGSGAKP 151 (371)
T ss_pred CCCcc-ccch-HHHHHh------hhccccCCCCCCCCCCCCCEEEEEEEEHHHhcCCeEEEEEEeeeccCCCCCCcccCC
Confidence 1 11 2110 011211 122110 1224578999999999999999999999999875432 11
Q ss_pred -------------Cc---------------------------------------EEEEEEEEEEEeCCCCcCCCeEecCC
Q 022539 147 -------------GK---------------------------------------PITVQEILKIDIKPGWKKGTKITFPE 174 (295)
Q Consensus 147 -------------G~---------------------------------------~~~~~~~l~V~Ip~G~~~G~~i~~~g 174 (295)
|. ++.+.++++|.||||+++|++|+|+|
T Consensus 152 ~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~G 231 (371)
T PRK14287 152 GTKPETCSHCGGSGQLNVEQNTPFGRVVNRRVCHHCEGTGKIIKQKCATCGGKGKVRKRKKINVKVPAGIDHGQQLRVSG 231 (371)
T ss_pred CCCCcccCCCCCEEEEEEEEecCCceEEEEEeCCCCCCCCccccccCCCCCCeeEEeeeEEEEEEECCcCCCCCEEEEcc
Confidence 10 23455789999999999999999999
Q ss_pred CCCCCC-CCCCccEEEEEEEeCCcceeecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCCCCCCcEEEEcCCC
Q 022539 175 KGNQEP-GLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEG 253 (295)
Q Consensus 175 ~G~~~~-~~~~GDliv~i~v~~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~~~~g~~~rl~g~G 253 (295)
+|++.+ +..+|||+|+|+++||+.|+|+|+||++++.|||.+|++|+++.|+|+||+ +.|+||+++++|+++||+|+|
T Consensus 232 ~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldg~-i~v~ip~g~~~g~~~ri~g~G 310 (371)
T PRK14287 232 QGEAGVNGGPPGDLYVVFNVKPHEFFERDGDDIYCEMPLTFPQVALGDEIEVPTLNGK-VKLKIPAGTQTGTSFRLRGKG 310 (371)
T ss_pred CCcCCCCCCCCccEEEEEEEecCCCEEEecCCeEEEEeccHHHHhCCCEEEEEcCCCC-EEEEECCCccCCcEEEEcCCC
Confidence 999874 567899999999999999999999999999999999999999999999997 899999999999999999999
Q ss_pred cCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHhC
Q 022539 254 MPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALG 291 (295)
Q Consensus 254 ~p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~~l~~~l~ 291 (295)
||.... +.+|||||+|+|.+|+.|+.+|+++|++++.
T Consensus 311 ~p~~~~-~~~GDL~V~~~v~~P~~l~~~q~~ll~~l~~ 347 (371)
T PRK14287 311 VPNVHG-RGQGDQHVQVRVVTPKNLTEKEKELMREFAG 347 (371)
T ss_pred ccCCCC-CCCCCEEEEEEEEcCCCCCHHHHHHHHHHHh
Confidence 997653 4689999999999999999999999999984
No 14
>PRK14281 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=4.2e-64 Score=475.29 Aligned_cols=288 Identities=34% Similarity=0.591 Sum_probs=235.7
Q ss_pred CCCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCccCC-
Q 022539 1 MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASDF- 79 (295)
Q Consensus 1 m~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~- 79 (295)
|.+|||+||||+++|+.+|||+|||+||++||||+|+++ .+|+++|++|++||++|+||.+|+.||+||+++++.+..
T Consensus 1 ~~~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~g~~~~~~~~~~ 79 (397)
T PRK14281 1 MKRDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDN-KEAEEHFKEVNEAYEVLSNDDKRRRYDQFGHAGVGSSAAS 79 (397)
T ss_pred CCCChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCc-hHHHHHHHHHHHHHHHhhhhhhhhhhhhccchhhcccccc
Confidence 789999999999999999999999999999999999864 468899999999999999999999999999988763211
Q ss_pred -CCCCC----CCCCCC-----CccccCC---C----CC-CCCCCCCC----CCCCCCCCeeeecccCHHHHhcCceeEEE
Q 022539 80 -GTPSY----HHPHDT-----KPCATRN---N----NN-NNHRAGGA----GPKPTPTPIETQLLCTLEELYKGARKKMK 137 (295)
Q Consensus 80 -g~~~~----~~~~~~-----~~f~~~~---~----~~-~~f~~~~~----~~~~~~~di~~~l~itl~e~~~G~~k~i~ 137 (295)
++++| ++..+. +.|++.+ + +| ..|+++.. ..+.++.|+++.|.|||+|+|+|+++++.
T Consensus 80 ~~~~~~~~~~~~~~d~f~~f~~~Fgg~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~~~i~ 159 (397)
T PRK14281 80 GGGPGYGGGGGDFNDIFSAFNDMFGGGARRGGGSPFGFEDVFGGGGRRRRASAGIPGTDLKIRLKLTLEEIAKGVEKTLK 159 (397)
T ss_pred CCCCCCCcCCCCHHHHHHHHHHHhCCCcccccccccccccccCCCcccccccCCCCCCCEEEEEEeEHHHHhCCeEEEEE
Confidence 11111 000000 1232110 0 00 00111100 12246889999999999999999999999
Q ss_pred EeEEeeC----C----------------CCc---------------------------------------EEEEEEEEEE
Q 022539 138 ISRVLPD----H----------------FGK---------------------------------------PITVQEILKI 158 (295)
Q Consensus 138 ~~r~~~~----g----------------~G~---------------------------------------~~~~~~~l~V 158 (295)
+.|.+.| | .|. ++.+.++++|
T Consensus 160 ~~r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V 239 (397)
T PRK14281 160 IKKQVPCKECNGTGSKTGATETCPTCHGSGEVRQASKTMFGQFVNITACPTCGGEGRVVKDRCPACYGEGIKQGEVTVKV 239 (397)
T ss_pred EEeeecCCCCCCcccCCCCCccCCCCCCCcEEEEEEecccceEEEEEecCCCcceeeeeCCCCCCCCCCccEecceEEEE
Confidence 9876432 1 110 2345678999
Q ss_pred EeCCCCcCCCeEecCCCCCCCC-CCCCccEEEEEEEeCCcceeecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEee
Q 022539 159 DIKPGWKKGTKITFPEKGNQEP-GLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPV 237 (295)
Q Consensus 159 ~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDliv~i~v~~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i 237 (295)
.||||+++|++|+|+|+|++.+ ++.+|||+|+|+++||+.|+|+|+||+++++|||.+||+|+++.|+|+||+ +.|+|
T Consensus 240 ~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~~~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldg~-i~v~i 318 (397)
T PRK14281 240 TVPAGVQDGNYLTLRGQGNAGPRGGAPGDLIVVIEEKPHELFVRNGDDVIYNLAVSYPDLVLGTKVEVPTLDGA-VKLTI 318 (397)
T ss_pred ecCCCCCCCCEEEEecccccCCCCCCCCcEEEEEEEcCCCCeEEecCCEEEEEEecHHHHhcCCeEEeecCCcc-EEEEe
Confidence 9999999999999999999976 567999999999999999999999999999999999999999999999997 89999
Q ss_pred CCCCCCCcEEEEcCCCcCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHhC
Q 022539 238 TDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALG 291 (295)
Q Consensus 238 ~~~~~~g~~~rl~g~G~p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~~l~~~l~ 291 (295)
|+++++|+++||+|+|||... .+.+|||||+|+|.||+.||++|+++|++++.
T Consensus 319 p~g~~~G~~~ri~g~G~P~~~-~~~~GDL~V~~~V~~P~~Ls~~qk~~l~~l~~ 371 (397)
T PRK14281 319 PAGTQPETMLRIPGKGIGHLR-GSGRGDQYVRVNVFVPKEVSHQDKELLKELKK 371 (397)
T ss_pred CCccCCCcEEEEcCCCCCCCC-CCCCCCEEEEEEEEcCCCCCHHHHHHHHHHHh
Confidence 999999999999999999765 34689999999999999999999999999985
No 15
>PRK14276 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=3.5e-64 Score=473.65 Aligned_cols=280 Identities=27% Similarity=0.443 Sum_probs=233.5
Q ss_pred CCCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCccCCC
Q 022539 1 MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASDFG 80 (295)
Q Consensus 1 m~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~g 80 (295)
-.+|||+||||+++||.+|||+|||+||++||||+|++ +.|+++|++|++||++|+||.+|++||+||+++++++..+
T Consensus 2 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~--~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~~~~~~~~~ 79 (380)
T PRK14276 2 NNTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKE--PGAEEKYKEVQEAYETLSDPQKRAAYDQYGAAGANGGFGG 79 (380)
T ss_pred CCCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--cCHHHHHHHHHHHHHHhcCHhhhhhHhhcCCccccCCCCC
Confidence 04899999999999999999999999999999999985 4688999999999999999999999999999887642111
Q ss_pred ---C-CCCCCC---C-CC-CccccCCCCCCCCCCCC----CCCCCCCCCeeeecccCHHHHhcCceeEEEEeEEeeC---
Q 022539 81 ---T-PSYHHP---H-DT-KPCATRNNNNNNHRAGG----AGPKPTPTPIETQLLCTLEELYKGARKKMKISRVLPD--- 144 (295)
Q Consensus 81 ---~-~~~~~~---~-~~-~~f~~~~~~~~~f~~~~----~~~~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~--- 144 (295)
+ ++ |.. . +. +.|+. .|++++ ...++++.|+.+.|.|||+|+|+|+++++.+.+.+.|
T Consensus 80 ~~~~~~~-~~~~~~~~~~~d~f~~------~fgg~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~~~i~~~~~~~C~~C 152 (380)
T PRK14276 80 GAGGFGG-FDGSGGFGGFEDIFSS------FFGGGGARRNPNAPRQGDDLQYRVNLDFEEAIFGKEKEVSYNREATCHTC 152 (380)
T ss_pred CCCCCCC-ccccccccchhhHHHH------HhCccccccCcCCCCCCCCEEEEEEEEHHHhcCCeEEEEEeeccccCCCC
Confidence 1 11 110 0 00 11111 122111 1224578899999999999999999999999775321
Q ss_pred -CC-----------------C--------------------------------------c-EEEEEEEEEEEeCCCCcCC
Q 022539 145 -HF-----------------G--------------------------------------K-PITVQEILKIDIKPGWKKG 167 (295)
Q Consensus 145 -g~-----------------G--------------------------------------~-~~~~~~~l~V~Ip~G~~~G 167 (295)
|+ | + ++.+.++++|.||||+++|
T Consensus 153 ~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G 232 (380)
T PRK14276 153 NGSGAKPGTSPVTCGKCHGSGVITVDTQTPLGMMRRQVTCDVCHGTGKEIKEPCQTCHGTGHEKQAHTVSVKIPAGVETG 232 (380)
T ss_pred cCcccCCCCCCccCCCCCCeeEEEEEEecCCceEEEEEECCCCCCCCccccCCCCCCCCceEEEEEEEEEEEeCCCccCC
Confidence 11 1 1 3456688999999999999
Q ss_pred CeEecCCCCCCCC-CCCCccEEEEEEEeCCcceeecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCCCCCCcE
Q 022539 168 TKITFPEKGNQEP-GLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSE 246 (295)
Q Consensus 168 ~~i~~~g~G~~~~-~~~~GDliv~i~v~~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~~~~g~~ 246 (295)
++|+|+|+|++.+ +..+|||+|+|+++||+.|+|+|+||+++++|||.+|++|+++.|+|++|+ ++|+||+++++|++
T Consensus 233 ~~i~l~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~tldg~-i~v~ip~g~~~g~~ 311 (380)
T PRK14276 233 QQIRLQGQGEAGFNGGPYGDLYVVFRVEPSKKFERDGSTIYYTLPISFVQAALGDTVEVPTVHGD-VELKIPAGTQTGKK 311 (380)
T ss_pred cEEEEeccccCCCCCCCCcCEEEEEEEEECcceeeecceEEEEEecCHHHHhCCCeEEEEcCCCc-EEEEECCCCCCCCE
Confidence 9999999999875 456799999999999999999999999999999999999999999999997 89999999999999
Q ss_pred EEEcCCCcCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHhC
Q 022539 247 VVIPNEGMPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALG 291 (295)
Q Consensus 247 ~rl~g~G~p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~~l~~~l~ 291 (295)
++|+|+|||..+ ...+|||||+|+|.||+.|+++|+++|++++.
T Consensus 312 ~~i~g~G~p~~~-~~~~GDL~V~~~v~~P~~l~~~q~~~l~~~~~ 355 (380)
T PRK14276 312 FRLRGKGAPKLR-GGGNGDQHVTVNIVTPTKLNDAQKEALKAFAK 355 (380)
T ss_pred EEECCCCcCCCC-CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence 999999999765 24679999999999999999999999999984
No 16
>PRK14280 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=4.5e-64 Score=472.30 Aligned_cols=280 Identities=29% Similarity=0.487 Sum_probs=234.5
Q ss_pred CC-CCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCccCC
Q 022539 1 MG-VDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASDF 79 (295)
Q Consensus 1 m~-~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~ 79 (295)
|. +|||+||||+++||.+|||+|||+||++||||+|++ +.|+++|++|++||++||||.+|++||+||+++++.+..
T Consensus 1 ~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HpD~~~~--~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~~~~~~ 78 (376)
T PRK14280 1 MAKRDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKE--EGADEKFKEISEAYEVLSDDQKRAQYDQFGHAGPNQGFG 78 (376)
T ss_pred CCCCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--ccHHHHHHHHHHHHHHhccHhHHHHHHhcCccccccCcC
Confidence 53 799999999999999999999999999999999975 458899999999999999999999999999988764311
Q ss_pred ----CCCCCCCC-CCC-CccccCCCCCCCCCCCC----CCCCCCCCCeeeecccCHHHHhcCceeEEEEeEEeeC----C
Q 022539 80 ----GTPSYHHP-HDT-KPCATRNNNNNNHRAGG----AGPKPTPTPIETQLLCTLEELYKGARKKMKISRVLPD----H 145 (295)
Q Consensus 80 ----g~~~~~~~-~~~-~~f~~~~~~~~~f~~~~----~~~~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~----g 145 (295)
++.+ |.+ .+. +.|.. .|++++ ...++++.|+.+.|.|||+|+|+|+++++.+.|.+.| |
T Consensus 79 ~~~~~~~~-~~~~~~~~d~f~~------~fgg~~~~~~~~~~~kg~di~~~l~vtLee~~~G~~~~i~~~r~~~C~~C~G 151 (376)
T PRK14280 79 GGGFGGGD-FGGGFGFEDIFSS------FFGGGGRRRDPNAPRQGADLQYTMTLTFEEAVFGKEKEIEIPKEETCDTCHG 151 (376)
T ss_pred CCCCCCCC-ccccccchhhHHH------HhCCccccCcccccccccCEEEEEEEEHHHHhCCceeEEEEeeeccCCCCCC
Confidence 1001 110 000 11221 122111 1224578999999999999999999999999876432 1
Q ss_pred CC--------------------------------------------------------cEEEEEEEEEEEeCCCCcCCCe
Q 022539 146 FG--------------------------------------------------------KPITVQEILKIDIKPGWKKGTK 169 (295)
Q Consensus 146 ~G--------------------------------------------------------~~~~~~~~l~V~Ip~G~~~G~~ 169 (295)
+| .++.+.++++|.||+|+++|++
T Consensus 152 ~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~i~V~Ip~G~~~G~~ 231 (376)
T PRK14280 152 SGAKPGTSKETCSHCGGSGQVSVEQNTPFGRVVNRQTCPHCNGTGQEIKEKCPTCHGKGKVRKRKKINVKIPAGVDNGQQ 231 (376)
T ss_pred cccCCCCCCccCCCCCCEEEEEEEeecCCceEEEEEEcCCCCCCCceecCCCCCCCCceEEEEEEEEEEEeCCCCcCCcE
Confidence 11 0245668999999999999999
Q ss_pred EecCCCCCCCC-CCCCccEEEEEEEeCCcceeecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCCCCCCcEEE
Q 022539 170 ITFPEKGNQEP-GLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVV 248 (295)
Q Consensus 170 i~~~g~G~~~~-~~~~GDliv~i~v~~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~~~~g~~~r 248 (295)
|+|+|+|++.+ +..+|||+|+|+++||+.|+|+|+||+++++|||++|++|+++.|+|+||+ +.|+||+++++|++++
T Consensus 232 i~l~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldg~-i~v~ip~g~~~g~~~~ 310 (376)
T PRK14280 232 IRVSGEGEPGVNGGPAGDLYVVFRVRPHEFFERDGDDIYCEMPLTFAQAALGDEIEVPTLHGK-VKLKIPAGTQTGTQFR 310 (376)
T ss_pred EEEcccccCCCCCCCCcCEEEEEEEecCCCeEEecCCEEEEEecCHHHHhCCCEEEEecCCce-EEEEECCCCCCCcEEE
Confidence 99999999875 567899999999999999999999999999999999999999999999996 8999999999999999
Q ss_pred EcCCCcCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHhC
Q 022539 249 IPNEGMPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALG 291 (295)
Q Consensus 249 l~g~G~p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~~l~~~l~ 291 (295)
|+|+|||... ...+|||||+|+|.+|+.||++|+++|++++.
T Consensus 311 i~g~G~p~~~-~~~~GDL~v~~~v~~P~~Ls~~q~~~l~~l~~ 352 (376)
T PRK14280 311 LKGKGVPNVR-GYGQGDQYVVVRVVTPTKLTDRQKELLREFAE 352 (376)
T ss_pred EcCCCCCCCC-CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence 9999999765 34689999999999999999999999999984
No 17
>PRK14297 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=8.3e-64 Score=471.37 Aligned_cols=286 Identities=28% Similarity=0.514 Sum_probs=235.6
Q ss_pred CCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCcc-CCC
Q 022539 2 GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKAS-DFG 80 (295)
Q Consensus 2 ~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~-~~g 80 (295)
.+|||+||||+++||.+|||+|||+||++||||+|+.+ ++|+++|++|++||++|+||.+|++||+||+++++.+ +++
T Consensus 3 ~~d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~G~~~~~~~~~~~ 81 (380)
T PRK14297 3 SKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGN-KEAEEKFKEINEAYQVLSDPQKKAQYDQFGTADFNGAGGFG 81 (380)
T ss_pred CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc-HHHHHHHHHHHHHHHHhcCHhhhCchhhcCcccccccCCCC
Confidence 47999999999999999999999999999999999864 4689999999999999999999999999999887632 111
Q ss_pred CCCC--CC--CC-CC-CccccCCCCCCCCCCC--CCCCCCCCCCeeeecccCHHHHhcCceeEEEEeEEeeC----C---
Q 022539 81 TPSY--HH--PH-DT-KPCATRNNNNNNHRAG--GAGPKPTPTPIETQLLCTLEELYKGARKKMKISRVLPD----H--- 145 (295)
Q Consensus 81 ~~~~--~~--~~-~~-~~f~~~~~~~~~f~~~--~~~~~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~----g--- 145 (295)
.++| |+ .. +. +.|..+.++ .+++. +...+++++|+++.|.|||+|+|+|+++++.+.+.+.| |
T Consensus 82 ~~~~~~~~~~~~~~~~d~f~~~fgg--~~g~~~~~~~~~~kg~di~~~l~vsLee~~~G~~~~i~~~r~~~C~~C~G~G~ 159 (380)
T PRK14297 82 SGGFGGFDFSDMGGFGDIFDSFFGG--GFGSSSRRRNGPQRGADIEYTINLTFEEAVFGVEKEISVTRNENCETCNGTGA 159 (380)
T ss_pred CCCCCCcCcccccchhHHHHHHhcc--CccccccccCCCCCCCCEEEEEEEEHHHhcCCeEEEEEeeeeccCCCcccccc
Confidence 1111 11 00 00 112111000 01111 11234578999999999999999999999999875432 1
Q ss_pred --------------CCc---------------------------------------EEEEEEEEEEEeCCCCcCCCeEec
Q 022539 146 --------------FGK---------------------------------------PITVQEILKIDIKPGWKKGTKITF 172 (295)
Q Consensus 146 --------------~G~---------------------------------------~~~~~~~l~V~Ip~G~~~G~~i~~ 172 (295)
.|. ++.+.++++|.||||+++|++|++
T Consensus 160 ~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~i~V~Ip~G~~~G~~I~l 239 (380)
T PRK14297 160 KPGTSPKTCDKCGGTGQIRVQRNTPLGSFVSTTTCDKCGGSGKVIEDPCNKCHGKGKVRKNRKIKVNVPAGVDTGNVIPL 239 (380)
T ss_pred cCCCcCccCCCccCeEEEEEEEEcCCceeEEEEeCCCCCCCceEcCCCCCCCCCCeEEEeEeEEEEEeCCCCCCCcEEEE
Confidence 110 245678999999999999999999
Q ss_pred CCCCCCCC-CCCCccEEEEEEEeCCcceeecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCCCCCCcEEEEcC
Q 022539 173 PEKGNQEP-GLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPN 251 (295)
Q Consensus 173 ~g~G~~~~-~~~~GDliv~i~v~~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~~~~g~~~rl~g 251 (295)
+|+|++.+ +..+|||+|+|++++|+.|+|+|+||+++++|||++|++|+++.|+|++|+ ++|+||+++++|+++||+|
T Consensus 240 ~g~G~~~~~~~~~GDL~v~v~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldg~-~~v~ip~g~~~g~~~ri~g 318 (380)
T PRK14297 240 RGQGEHGKNGGPTGDLYINIRVAPHKTFKRKGFDIYIDKHISFAKAALGTEIKVPTVDGE-VKYEVPAGTQPGTVFRLKG 318 (380)
T ss_pred ecCccCCCCCCCCccEEEEEEEcCCCCEEEeCCCEEEEEEeCHHHHhCCCcEEEEcCCCc-EEEEECCCcCCCCEEEEcC
Confidence 99999865 556899999999999999999999999999999999999999999999997 8999999999999999999
Q ss_pred CCcCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHhCC
Q 022539 252 EGMPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALGG 292 (295)
Q Consensus 252 ~G~p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~~l~~~l~~ 292 (295)
+|||..+ .+.+|||||+|+|.||+.||++|+++|+++++.
T Consensus 319 ~G~p~~~-~~~~GDL~v~~~v~~P~~ls~~q~~~l~~~~~~ 358 (380)
T PRK14297 319 KGVPRVN-STGRGNQYVTVIVDIPKKLNSKQKEALTMFMEA 358 (380)
T ss_pred CCcCCCC-CCCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHh
Confidence 9999765 356899999999999999999999999999863
No 18
>PRK14284 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=8.3e-64 Score=472.71 Aligned_cols=286 Identities=30% Similarity=0.532 Sum_probs=234.1
Q ss_pred CCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCccC--CC
Q 022539 3 VDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASD--FG 80 (295)
Q Consensus 3 ~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~--~g 80 (295)
.|||+||||+++||.+|||+|||+||++||||+|+++ +.|+++|++|++||++|+|+.+|+.||+||++++..+. ++
T Consensus 1 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~g~~~~~ 79 (391)
T PRK14284 1 MDYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGD-AEAEKRFKEVSEAYEVLSDAQKRESYDRYGKDGPFAGAGGFG 79 (391)
T ss_pred CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc-hHHHHHHHHHHHHHHHhcCHHHHHHHHhccccccccccCCcC
Confidence 4999999999999999999999999999999999864 56899999999999999999999999999998764321 11
Q ss_pred CCCCCCC-CCC-----Ccccc----CCCCCC-CCCC-------CC-CCCCCCCCCeeeecccCHHHHhcCceeEEEEeEE
Q 022539 81 TPSYHHP-HDT-----KPCAT----RNNNNN-NHRA-------GG-AGPKPTPTPIETQLLCTLEELYKGARKKMKISRV 141 (295)
Q Consensus 81 ~~~~~~~-~~~-----~~f~~----~~~~~~-~f~~-------~~-~~~~~~~~di~~~l~itl~e~~~G~~k~i~~~r~ 141 (295)
+++| .+ .++ ..|++ .+.-|+ .|++ .. ...++++.|+.+.|.|||+|+|+|+++++.+.+.
T Consensus 80 ~~g~-~~~~~~~~~~~~~f~~~~~~~~d~f~~~fgg~g~~~~~~~~~~~~~~g~d~~~~l~vslee~~~G~~~~i~~~r~ 158 (391)
T PRK14284 80 GAGM-GNMEDALRTFMGAFGGEFGGGGSFFEGLFGGLGEAFGMRGGPAGARQGASKKVHITLSFEEAAKGVEKELLVSGY 158 (391)
T ss_pred CCCc-CcccchhhhccccccccccccccchhhhccCccccccccccCCCcCCCCCeEEEEEEEHHHHhCCeeEEEEEeee
Confidence 1121 10 000 00110 000011 1221 00 1224578899999999999999999999999875
Q ss_pred eeC----CC---------------------------------------------------Cc-EEEEEEEEEEEeCCCCc
Q 022539 142 LPD----HF---------------------------------------------------GK-PITVQEILKIDIKPGWK 165 (295)
Q Consensus 142 ~~~----g~---------------------------------------------------G~-~~~~~~~l~V~Ip~G~~ 165 (295)
+.| |+ |+ ++.+.++++|.||||++
T Consensus 159 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~ 238 (391)
T PRK14284 159 KSCDACSGSGANSSQGIKVCDRCKGSGQVVQSRGFFSMASTCPECGGEGRVITDPCSVCRGQGRIKDKRSVHVHIPAGVD 238 (391)
T ss_pred ccCCCCcccccCCCCCCeecCccCCeeEEEEEeceEEEEEECCCCCCCCcccCCcCCCCCCcceecceEEEEEEECCCCC
Confidence 331 11 11 34566899999999999
Q ss_pred CCCeEecCCCCCCCC-CCCCccEEEEEEEeCCcceeecCCceEEEEEecHHHHhcCCEEEEeccC-CcEEEEeeCCCCCC
Q 022539 166 KGTKITFPEKGNQEP-GLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALD-GRNLTLPVTDIIQP 243 (295)
Q Consensus 166 ~G~~i~~~g~G~~~~-~~~~GDliv~i~v~~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~-g~~i~v~i~~~~~~ 243 (295)
+|++|+|+|+|++.+ ++.+|||+|+|+++||+.|+|+|+||+++++|||++|++|++++|+|++ |+.++|+||+++++
T Consensus 239 ~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~tld~g~~i~v~Ip~g~~~ 318 (391)
T PRK14284 239 SGMRLKMEGYGDAGQNGAPAGDLYVFIDVEPHPVFERRGDDLILELPIGFVDAALGMKKEIPTLLKEGTCRLTIPEGIQS 318 (391)
T ss_pred CCCEEEEeccccCCCCCCCCCCEEEEEEEecCCCceeecCCEEEEEEecHHHHhCCCeEEEeecCCCcEEEEEECCccCC
Confidence 999999999999986 5678999999999999999999999999999999999999999999999 66799999999999
Q ss_pred CcEEEEcCCCcCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHhC
Q 022539 244 GSEVVIPNEGMPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALG 291 (295)
Q Consensus 244 g~~~rl~g~G~p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~~l~~~l~ 291 (295)
|++++|+|+|||..+ ...+|||||+|+|.+|+.|+++|+++|++++.
T Consensus 319 g~~~~i~g~G~p~~~-~~~~GDL~V~~~v~~P~~l~~~q~~ll~~l~~ 365 (391)
T PRK14284 319 GTILKVRGQGFPNVH-GKGRGDLLVRISVETPQNLSEEQKELLRQFAA 365 (391)
T ss_pred CeEEEECCCCCCCCC-CCCCCcEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence 999999999999765 24689999999999999999999999999984
No 19
>PRK14301 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1e-63 Score=469.13 Aligned_cols=284 Identities=30% Similarity=0.512 Sum_probs=235.4
Q ss_pred CCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCccCCCC
Q 022539 2 GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASDFGT 81 (295)
Q Consensus 2 ~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~g~ 81 (295)
.+|||++|||+++||.+|||+|||+||++||||+|+.+ ++|+++|++|++||+||+||.+|+.||+||++++++++. +
T Consensus 3 ~~~~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~g~~g~~~~~~-~ 80 (373)
T PRK14301 3 QRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDN-PEAEQKFKEAAEAYEVLRDAEKRARYDRFGHAGVNGNGG-F 80 (373)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHhCCCcCCCC-hHHHHHHHHHHHHHHHhcchhhhhhhhhccccccccCCC-C
Confidence 58999999999999999999999999999999999864 568899999999999999999999999999988764211 1
Q ss_pred CCCCCCCCCCccccCCCCC-CCCC--CC---CCCCCCCCCCeeeecccCHHHHhcCceeEEEEeEEeeC----CCC----
Q 022539 82 PSYHHPHDTKPCATRNNNN-NNHR--AG---GAGPKPTPTPIETQLLCTLEELYKGARKKMKISRVLPD----HFG---- 147 (295)
Q Consensus 82 ~~~~~~~~~~~f~~~~~~~-~~f~--~~---~~~~~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~----g~G---- 147 (295)
++ |++.. .+|..+..-| +.|+ ++ ....+.++.|+.+.|.|||+|+|+|+++++.+.+.+.| |+|
T Consensus 81 ~g-~~~~~-~~~~~f~d~f~~~fg~g~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~k~i~~~r~~~C~~C~G~G~~~~ 158 (373)
T PRK14301 81 GG-FSSAE-DIFSHFSDIFGDLFGFSGGGSRRGPRPQAGSDLRYNLTVSFRQAAKGDEVTLRIPKNVTCDDCGGSGAAPG 158 (373)
T ss_pred CC-ccccc-ccccchHHHHHHHhhccCcccccCCCCCCCCCEEEEEeccHHHHhCCceEEEEeeecccCCCCCCcccCCC
Confidence 12 21100 0111000000 0111 11 11234578999999999999999999999999775431 111
Q ss_pred -----------------------------------------------c-EEEEEEEEEEEeCCCCcCCCeEecCCCCCCC
Q 022539 148 -----------------------------------------------K-PITVQEILKIDIKPGWKKGTKITFPEKGNQE 179 (295)
Q Consensus 148 -----------------------------------------------~-~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~ 179 (295)
+ ++.+.++++|.||||+++|++|+|+|+|++.
T Consensus 159 ~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~ 238 (373)
T PRK14301 159 TSPETCRHCGGSGQVRQSQGFFQIAVPCPVCRGEGRVITHPCPKCKGSGIVQQTRELKVRIPAGVDTGSRLRLRGEGEPG 238 (373)
T ss_pred CCCcccCCccCeeEEEEEeeeEEEEEeCCCCCceeeecCCCCCCCCCCceeccceEEEEEeCCCCcCCCEEEEeccccCC
Confidence 1 3456689999999999999999999999987
Q ss_pred C-CCCCccEEEEEEEeCCcceeecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCCCCCCcEEEEcCCCcCCCC
Q 022539 180 P-GLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGMPISK 258 (295)
Q Consensus 180 ~-~~~~GDliv~i~v~~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~~~~g~~~rl~g~G~p~~~ 258 (295)
+ +..+|||+|+|++++|+.|+|+|+||+++++|||.+|++|+++.|+|+||+ ++|+||+++++|++++|+|+|||..+
T Consensus 239 ~~~~~~GDLiv~i~v~~h~~f~r~G~DL~~~~~Isl~eAl~G~~~~v~tldG~-i~v~ip~g~~~g~~~ri~g~G~p~~~ 317 (373)
T PRK14301 239 VHGGPPGDLYVVITVEDDKIFQRQGQDLVVTQEISFVQAALGDRIEVPTLDDP-VTLDIPKGTQSGEVFRLRGKGLPYLG 317 (373)
T ss_pred CCCCCCcCEEEEEEEEECCCceeecCcEEEEEEecHHHHhCCCeEEEecCCcc-EEEEECCCcCCCcEEEEcCCCCCCCC
Confidence 5 567899999999999999999999999999999999999999999999997 99999999999999999999999765
Q ss_pred CCCCCCCEEEEEEEECCCCCCHHHHHHHHHHhC
Q 022539 259 DPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALG 291 (295)
Q Consensus 259 ~~~~~GDL~v~~~v~~P~~l~~~~~~~l~~~l~ 291 (295)
...+|||||+|+|.+|+.|+++|+++|++++.
T Consensus 318 -~~~~GDL~I~~~V~~P~~l~~~q~~~l~~l~~ 349 (373)
T PRK14301 318 -SSQKGDLLVEVSVVTPTKLTKRQEELLREFEA 349 (373)
T ss_pred -CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence 34689999999999999999999999999874
No 20
>PRK14294 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.9e-63 Score=466.73 Aligned_cols=286 Identities=33% Similarity=0.563 Sum_probs=235.9
Q ss_pred CC-CCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCccCC
Q 022539 1 MG-VDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASDF 79 (295)
Q Consensus 1 m~-~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~ 79 (295)
|. +|||+||||+++||.+|||+|||+||++||||+|+.+ ++|+++|++|++||+||+||.+|+.||+||+++++.+++
T Consensus 1 ~~~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~-~~~~~~f~~~~~Ay~vL~d~~~r~~yD~~G~~g~~~~~~ 79 (366)
T PRK14294 1 MVKRDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGD-KEAEELFKEAAEAYEVLSDPKKRGIYDQYGHEGLSGTGF 79 (366)
T ss_pred CCCCChHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCc-hHHHHHHHHHHHHHHHhccHHHHHHHHhhccccccCCCC
Confidence 53 8999999999999999999999999999999999854 468899999999999999999999999999998864322
Q ss_pred CC-CCC---CCCCCCCccccCCCCCCCCCCCC-CCCCCCCCCeeeecccCHHHHhcCceeEEEEeEEeeC----CC----
Q 022539 80 GT-PSY---HHPHDTKPCATRNNNNNNHRAGG-AGPKPTPTPIETQLLCTLEELYKGARKKMKISRVLPD----HF---- 146 (295)
Q Consensus 80 g~-~~~---~~~~~~~~f~~~~~~~~~f~~~~-~~~~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~----g~---- 146 (295)
++ ++| |+.. .+.|..+++ +++.+++. ...+.+++|+++.|.|||+|+|+|+++++.+.+.+.| |+
T Consensus 80 ~~~~~~~~~~~~~-~d~f~~~fg-~g~~~~~~~~~~~~~g~d~~~~l~lslee~~~G~~~~i~~~r~~~C~~C~G~G~~~ 157 (366)
T PRK14294 80 SGFSGFDDIFSSF-GDIFEDFFG-FGGGRRGRSRTAVRAGADLRYDLTLPFLEAAFGTEKEIRIQKLETCEECHGSGCEP 157 (366)
T ss_pred CCcCccccchhhh-hhhHHHhhc-cCCCcCCcccCCCCCCCCceEEEEeeHHHhcCCeEEEEEeeecccCCCCCCccccC
Confidence 21 121 1100 011211100 00000000 1234578999999999999999999999999876421 11
Q ss_pred -----------------------------------------------Cc-EEEEEEEEEEEeCCCCcCCCeEecCCCCCC
Q 022539 147 -----------------------------------------------GK-PITVQEILKIDIKPGWKKGTKITFPEKGNQ 178 (295)
Q Consensus 147 -----------------------------------------------G~-~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~ 178 (295)
|+ ++.+.++++|.||||+++|++|+|+|+|++
T Consensus 158 ~~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~ 237 (366)
T PRK14294 158 GTSPTTCPQCGGSGQVTQSQGFFSIRTTCPRCRGMGKVIVSPCKTCHGQGRVRVSKTVQVKIPAGVDTGSRLRLRGEGEA 237 (366)
T ss_pred CCCcccCCCcCCeEEEEEEeeeEEEEeeCCCCCCcCeecCcCCCCCCCceEeecceeEEEecCCCCcCCcEEEEccCccC
Confidence 11 345668999999999999999999999998
Q ss_pred C-CCCCCccEEEEEEEeCCcceeecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCCCCCCcEEEEcCCCcCCC
Q 022539 179 E-PGLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGMPIS 257 (295)
Q Consensus 179 ~-~~~~~GDliv~i~v~~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~~~~g~~~rl~g~G~p~~ 257 (295)
. .++.+|||+|+|+++||+.|+|+|+||++++.|||.+|++|+++.|+|+||+ ++|+||+++++|++++|+|+|||..
T Consensus 238 ~~~~~~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~-~~v~ip~g~~~g~~iri~G~G~p~~ 316 (366)
T PRK14294 238 GVRGGPPGDLYVFLTVEPHEFFERDGNDVHCKVPISFVQAALGAQIEVPTLEGE-RELKIPKGTQPGDIFRFKGKGIPSL 316 (366)
T ss_pred CCCCCCCCcEEEEEEEccCCcceecCCCEEEEEEeCHHHHhCCCeEEEECCCCc-EEEEECCCcCCCCEEEECCCCCCCC
Confidence 6 4677899999999999999999999999999999999999999999999997 7999999999999999999999976
Q ss_pred CCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHhC
Q 022539 258 KDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALG 291 (295)
Q Consensus 258 ~~~~~~GDL~v~~~v~~P~~l~~~~~~~l~~~l~ 291 (295)
. ...+|||||+|+|.+|+.|+++++++|++++.
T Consensus 317 ~-~~~~GDL~V~~~v~~P~~l~~~q~~ll~~~~~ 349 (366)
T PRK14294 317 R-GGGRGDQIIEVEVKVPTRLTKKQEELLTEFAR 349 (366)
T ss_pred C-CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHH
Confidence 5 24689999999999999999999999999985
No 21
>PRK14300 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=4.4e-63 Score=465.01 Aligned_cols=285 Identities=28% Similarity=0.467 Sum_probs=236.4
Q ss_pred CCCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCccC--
Q 022539 1 MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASD-- 78 (295)
Q Consensus 1 m~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~-- 78 (295)
|.+|||+||||+++||.+|||+|||+||++||||+|++ ..++++|++|++||++|+|+.+|+.||+||++++..+.
T Consensus 1 ~~~~~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~--~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~ 78 (372)
T PRK14300 1 MSQDYYQILGVSKTASQADLKKAYLKLAKQYHPDTTDA--KDAEKKFKEINAAYDVLKDEQKRAAYDRFGHDAFQNQQSR 78 (372)
T ss_pred CCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--cCHHHHHHHHHHHHHHhhhHhHhhHHHhcccccccccccc
Confidence 88999999999999999999999999999999999974 35788999999999999999999999999998876321
Q ss_pred --CCC-CCCCCCCCCCccccCCCCCCCCCCCCC----CCCCCCCCeeeecccCHHHHhcCceeEEEEeEEeeC----CCC
Q 022539 79 --FGT-PSYHHPHDTKPCATRNNNNNNHRAGGA----GPKPTPTPIETQLLCTLEELYKGARKKMKISRVLPD----HFG 147 (295)
Q Consensus 79 --~g~-~~~~~~~~~~~f~~~~~~~~~f~~~~~----~~~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~----g~G 147 (295)
.++ ++ |+.....+|....++ .|++++. ..+.++.|+++.|.|||+|+|+|+++++.+.|.+.| |+|
T Consensus 79 ~~~g~~~~-~~~~~~~~f~~~f~~--~~gg~~~~~~~~~~~~g~di~~~l~~sLee~~~G~~k~i~~~r~~~C~~C~G~g 155 (372)
T PRK14300 79 GGGGNHGG-FHPDINDIFGDFFSD--FMGGSRRSRPTSSKVRGSDLKYNLTINLEEAFHGIEKNISFSSEVKCDTCHGSG 155 (372)
T ss_pred CCCCCCCc-cccchhhhHHHHHHh--hcCCCCCCCCCcCCCCCCCeeEEEEEEHHHHhCCceEEEEeeeccccCCCCCcc
Confidence 010 11 211000112111000 1221111 112478899999999999999999999999876432 111
Q ss_pred ----------------------------------------------------cEEEEEEEEEEEeCCCCcCCCeEecCCC
Q 022539 148 ----------------------------------------------------KPITVQEILKIDIKPGWKKGTKITFPEK 175 (295)
Q Consensus 148 ----------------------------------------------------~~~~~~~~l~V~Ip~G~~~G~~i~~~g~ 175 (295)
.++.+.++++|.||||+++|++|+++|+
T Consensus 156 ~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~l~g~ 235 (372)
T PRK14300 156 SEKGETVTTCDACSGVGATRMQQGFFTIEQACHKCQGNGQIIKNPCKKCHGMGRYHKQRNLSVNIPAGVENGTRIRHTGE 235 (372)
T ss_pred cCCCCCCccCCCccCeEEEEEeeceEEEEEeCCCCCccceEeCCCCCCCCCceEEEeeEEEEEEECCCCCCCcEEEEecc
Confidence 0355678999999999999999999999
Q ss_pred CCCC-CCCCCccEEEEEEEeCCcceeecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCCCCCCcEEEEcCCCc
Q 022539 176 GNQE-PGLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGM 254 (295)
Q Consensus 176 G~~~-~~~~~GDliv~i~v~~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~~~~g~~~rl~g~G~ 254 (295)
|++. ++..+|||+|+|+++||+.|+|+|+||++++.|+|++|++|+++.|+|+||++++|+||+++++|++++|+|+||
T Consensus 236 G~~~~~~~~~GDL~v~i~v~~h~~f~R~G~Dl~~~~~Isl~~Al~G~~~~i~~ldg~~i~v~Ip~g~~~g~~iri~g~G~ 315 (372)
T PRK14300 236 GEAGIRGGNSGDLYVDIAIKPHDIYKVDGANLHCKLPISFVNAALGGEIEVPVIEGGKVNLTIPAGTQNGDQLRLRSKGM 315 (372)
T ss_pred ccCCCCCCCCCCEEEEEEECCCCCeEEecCCEEEEEecCHHHHhCCCEEEEecCCCCEEEEEECCccCCCcEEEECCCCC
Confidence 9986 467899999999999999999999999999999999999999999999999889999999999999999999999
Q ss_pred CCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHhC
Q 022539 255 PISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALG 291 (295)
Q Consensus 255 p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~~l~~~l~ 291 (295)
|..+ ...+|||||+|+|.||+.||++|+++|++++.
T Consensus 316 p~~~-~~~~GDL~V~~~v~~P~~ls~~qk~~l~~l~~ 351 (372)
T PRK14300 316 SKMR-STIRGDMLTHIHVEVPKNLSKRQRELLEEFKK 351 (372)
T ss_pred CCCC-CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence 9764 24689999999999999999999999999985
No 22
>PRK14291 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=4e-63 Score=466.80 Aligned_cols=288 Identities=34% Similarity=0.558 Sum_probs=236.3
Q ss_pred CCCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCccCC-
Q 022539 1 MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASDF- 79 (295)
Q Consensus 1 m~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~- 79 (295)
|.+|||++|||+++||.+|||+|||+||++||||+|++ ++|+++|++|++||++||||.+|+.||+||++++..+..
T Consensus 1 ~~~d~Y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~--~~~~~~f~~i~~Ay~vLsd~~kR~~YD~~g~~~~~~~~~~ 78 (382)
T PRK14291 1 AKKDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKN--PEAEEKFKEINEAYQVLSDPEKRKLYDQFGHAAFSGSGQQ 78 (382)
T ss_pred CCCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCCCCCCC--ccHHHHHHHHHHHHHHhcCHHHHHHHhhhcccccccccCc
Confidence 78999999999999999999999999999999999985 468899999999999999999999999999987753211
Q ss_pred --CCCCC--CCCCCC-CccccCCC--CC-CCCCCC----CC----CCCCCCCCeeeecccCHHHHhcCceeEEEEeEEee
Q 022539 80 --GTPSY--HHPHDT-KPCATRNN--NN-NNHRAG----GA----GPKPTPTPIETQLLCTLEELYKGARKKMKISRVLP 143 (295)
Q Consensus 80 --g~~~~--~~~~~~-~~f~~~~~--~~-~~f~~~----~~----~~~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~ 143 (295)
+..+| |...+. ..|..+.+ ++ +.|++. +. ..+.+++|+.+.|.|||+|+|+|+++++.+.+.+.
T Consensus 79 ~~~~~~~~~~~~~~~~d~f~~~f~~fg~~~~fg~~~~~~~~~~~~~~~~~g~di~~~l~vsLee~~~G~~~~i~~~r~~~ 158 (382)
T PRK14291 79 QQGQEGFSDFGGGNIEDILEDVFDIFGFGDIFGRRRATRERRKTYQRPVKGEDIYQTVEISLEEAYTGTTVSLEVPRYVP 158 (382)
T ss_pred cccccccccccCCCHHHHHHHHHHhccccccccccccccccccccccccCCCCEEEEEEEEHHHhhCCEEEEEEEeeecc
Confidence 11111 111111 11111000 00 012210 00 12347889999999999999999999999987643
Q ss_pred C----CCC---------------------------------------------------cEEEEEEEEEEEeCCCCcCCC
Q 022539 144 D----HFG---------------------------------------------------KPITVQEILKIDIKPGWKKGT 168 (295)
Q Consensus 144 ~----g~G---------------------------------------------------~~~~~~~~l~V~Ip~G~~~G~ 168 (295)
| |+| .++.+.++++|.||||+++|+
T Consensus 159 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~ 238 (382)
T PRK14291 159 CEACGGTGYDPGSGEKVCPTCGGSGEIYQRGGFFRISQTCPTCGGEGVLREPCSKCNGRGLVIKKETIKVRIPPGVDNGS 238 (382)
T ss_pred CCCCccccCCCCCCCccCCCCCCceEEEEecceEEEEecCCCCCCceEEccCCCCCCCCceEEeeeEEEEEeCCCCCCCC
Confidence 2 111 135667899999999999999
Q ss_pred eEecCCCCCCCC-CCCCccEEEEEEEeCCcceeecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCCCCCCcEE
Q 022539 169 KITFPEKGNQEP-GLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEV 247 (295)
Q Consensus 169 ~i~~~g~G~~~~-~~~~GDliv~i~v~~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~~~~g~~~ 247 (295)
+|+|+|+|++.+ ++.+|||+|+|+++||+.|+|+|+||++++.|||.+|++|+++.|+|+||++++|+||+++++|+++
T Consensus 239 ~i~~~g~G~~~~~g~~~GDL~v~i~~~~h~~F~r~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~~l~V~Ip~g~~~G~~i 318 (382)
T PRK14291 239 KLRVPGKGHAGRFGGPPGDLYIIVKVKPHPLFERRGDNLYLDVNITVAEAVLGTELEVPLLDGKKEKVKIPPGTKEGDKI 318 (382)
T ss_pred EEEEecCcCCCCCCCCCccEEEEEEEccCCCeeeecCCeEEEEEeeHHHHhCCCEEEEecCCCCEEEEEECCccCCCCEE
Confidence 999999999875 7789999999999999999999999999999999999999999999999988999999999999999
Q ss_pred EEcCCCcCCCCCCCCCCCEEEEEEEECCC--CCC------HHHHHHHHHHhC
Q 022539 248 VIPNEGMPISKDPSKKGNLIIKFDIMFPS--RLT------AEQKSDLKRALG 291 (295)
Q Consensus 248 rl~g~G~p~~~~~~~~GDL~v~~~v~~P~--~l~------~~~~~~l~~~l~ 291 (295)
+|+|+|||..+ ...+|||||+|+|.||+ .|| ++|+++|+++..
T Consensus 319 ~i~G~G~p~~~-~~~~GDL~V~~~V~~P~~~~ls~~~~~~~~~~~~~~~l~~ 369 (382)
T PRK14291 319 RVPGKGMPRLK-GSGYGDLVVRVHIDVPKISMLSKLMGDGKKAKKLLKELDK 369 (382)
T ss_pred EECCCCCCCCC-CCCCCCEEEEEEEEeCCCcCcCccccCCHHHHHHHHHHHh
Confidence 99999999765 24689999999999998 599 999999999864
No 23
>PRK14299 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.1e-62 Score=448.56 Aligned_cols=270 Identities=34% Similarity=0.515 Sum_probs=223.6
Q ss_pred CCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCccCC--
Q 022539 2 GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASDF-- 79 (295)
Q Consensus 2 ~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~-- 79 (295)
.+|||+||||+++||.+|||+|||+||++||||+|++ +.++++|++|++||++|+||.+|+.||+||++++..+..
T Consensus 3 ~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~--~~~~~~f~~i~~Ay~~L~d~~kr~~yD~~g~~~~~~~~~~~ 80 (291)
T PRK14299 3 YKDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKS--PGAEEKFKEINEAYTVLSDPEKRRIYDTYGTTAASAGWQGP 80 (291)
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--hhHHHHHHHHHHHHHHhcCHHHHHHHHhcCCccccccccCC
Confidence 5899999999999999999999999999999999974 468899999999999999999999999999986542110
Q ss_pred --CCCC--CCCCC---CC-CccccCCCCCCCCCCC------CCCCCCCCCCeeeecccCHHHHhcCceeEEEEeEEeeCC
Q 022539 80 --GTPS--YHHPH---DT-KPCATRNNNNNNHRAG------GAGPKPTPTPIETQLLCTLEELYKGARKKMKISRVLPDH 145 (295)
Q Consensus 80 --g~~~--~~~~~---~~-~~f~~~~~~~~~f~~~------~~~~~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g 145 (295)
++++ .|++. +. +.|..+.++.+.+++. .+..++++.|+++.+.|||+|+|+||++++++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~d~f~~~fgg~~~~~~~g~~~~~~~~~~~~g~dl~~~l~isL~ea~~G~~~~i~l~------ 154 (291)
T PRK14299 81 PPGPPGGGDFSGFNVGDFSDFFQQLFGGRGGFGGFGDLFGSVGRRARKGRDLEAELPLTLEEAYRGGEKVVEVA------ 154 (291)
T ss_pred CCCCCCCCCccccCcCCHHHHHHHHhCCCCCCCCcccccccccCCCCCCCCEEEEEEecHHHHhCCCeEEEeeC------
Confidence 1011 12111 11 1111110000000000 012245788999999999999999999998773
Q ss_pred CCcEEEEEEEEEEEeCCCCcCCCeEecCCCCCCCCCCCCccEEEEEEEeCCcceeecCCceEEEEEecHHHHhcCCEEEE
Q 022539 146 FGKPITVQEILKIDIKPGWKKGTKITFPEKGNQEPGLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNL 225 (295)
Q Consensus 146 ~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDliv~i~v~~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i 225 (295)
| ++++|.||||+++|++|+++|+|++. |||+|+|++++|+.|+|+|+||+++++||+.+|++|+++.|
T Consensus 155 -g------~~~~V~Ip~G~~~G~~ir~~g~G~~~-----GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~v 222 (291)
T PRK14299 155 -G------ERLSVRIPPGVREGQVIRLAGKGRQG-----GDLYLVVRLLPHPVFRLEGDDLYATVDVPAPIAVVGGKVRV 222 (291)
T ss_pred -C------EEEEEecCCCcCCCcEEEECCCCCCC-----CCEEEEEEEcCCCCeEEECCEEEEEEecCHHHHhCCCEEEE
Confidence 3 47999999999999999999999873 99999999999999999999999999999999999999999
Q ss_pred eccCCcEEEEeeCCCCCCCcEEEEcCCCcCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHhCCCC
Q 022539 226 TALDGRNLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALGGVY 294 (295)
Q Consensus 226 ~~l~g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~~l~~~l~~~~ 294 (295)
+|+||+ ++|+||+++++|+++||+|+|||.. ++.+|||||+|+|.+|+.|+++++++|++++...+
T Consensus 223 ~tldG~-~~v~ip~~~~~g~~~rl~g~G~p~~--~~~~GDL~v~~~V~~P~~l~~~~~~~l~~l~~~~~ 288 (291)
T PRK14299 223 MTLDGP-VEVTIPPRTQAGRKLRLKGKGWPRG--PAGRGDQYAEVRITIPTRPTPEEERLYKQLAELYK 288 (291)
T ss_pred ECCCCC-EEEEeCCCcCCCCEEEECCCCCCCC--CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHhhhh
Confidence 999996 8999999999999999999999963 35789999999999999999999999999986544
No 24
>PRK14283 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2.6e-62 Score=460.91 Aligned_cols=284 Identities=31% Similarity=0.498 Sum_probs=233.6
Q ss_pred CCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCccCCCC
Q 022539 2 GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASDFGT 81 (295)
Q Consensus 2 ~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~g~ 81 (295)
.+|||++|||+++||.+|||+|||+||++||||+|++ ++|+++|++|++||++|+|+.+|++||+||++++.+. +.
T Consensus 4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~--~~a~~~f~~i~~Ay~~Lsd~~kR~~YD~~G~~g~~~~--~~ 79 (378)
T PRK14283 4 KRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEE--EGAEEKFKEISEAYAVLSDDEKRQRYDQFGHAGMDGF--SQ 79 (378)
T ss_pred cCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--ccHHHHHHHHHHHHHHhchhHHHHHHhhhcccccccc--cc
Confidence 4799999999999999999999999999999999985 4689999999999999999999999999999877521 11
Q ss_pred CCCCCCCCC-Ccccc----CCCCCCC--CCCCCCCCCCCCCCeeeecccCHHHHhcCceeEEEEeEEeeC----C-----
Q 022539 82 PSYHHPHDT-KPCAT----RNNNNNN--HRAGGAGPKPTPTPIETQLLCTLEELYKGARKKMKISRVLPD----H----- 145 (295)
Q Consensus 82 ~~~~~~~~~-~~f~~----~~~~~~~--f~~~~~~~~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~----g----- 145 (295)
.++|...+. ..|.+ ++.-|+. |+++....++++.|+.+++.|||+|+|+|+++++.+.+.+.| |
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~fgg~~~~~~~kg~di~~~l~vsLed~~~G~~~~i~~~r~~~C~~C~G~G~~~ 159 (378)
T PRK14283 80 EDIFNNINFEDIFQGFGFGIGNIFDMFGFGGGSRHGPQRGADIYTEVEITLEEAASGVEKDIKVRHTKKCPVCNGSRAEP 159 (378)
T ss_pred cccccccCccccccccccchhhhccccccCCCCCCCccCCCCeEEEeeeeHHHHhCCcceEEEeeeeccCCCCCccccCC
Confidence 111111000 00111 0001111 222111224578899999999999999999999999776432 1
Q ss_pred ------------CCc---------------------------------------EEEEEEEEEEEeCCCCcCCCeEecCC
Q 022539 146 ------------FGK---------------------------------------PITVQEILKIDIKPGWKKGTKITFPE 174 (295)
Q Consensus 146 ------------~G~---------------------------------------~~~~~~~l~V~Ip~G~~~G~~i~~~g 174 (295)
.|. ++.+.++++|.||||+++|++|+|+|
T Consensus 160 ~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~IppG~~~G~~i~l~g 239 (378)
T PRK14283 160 GSEVKTCPTCGGTGQVKQVRNTILGQMMNVTTCPDCQGEGKIVEKPCSNCHGKGVVRETKTISVKIPAGVETGSRLRVSG 239 (378)
T ss_pred CCCCccCCCcCCccEEEEEEeccCceEEEEEECCCCCccceecCCCCCCCCCceeeccceeEEEEECCCCCCCcEEEEec
Confidence 110 23455789999999999999999999
Q ss_pred CCCCCC-CCCCccEEEEEEEeCCcceeecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCCCCCCcEEEEcCCC
Q 022539 175 KGNQEP-GLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEG 253 (295)
Q Consensus 175 ~G~~~~-~~~~GDliv~i~v~~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~~~~g~~~rl~g~G 253 (295)
+|++.+ +..+|||+|+|++++|+.|+|+|+||++++.|||.+|++|+++.|+|+|| ++.|+||+++++|+++||+|+|
T Consensus 240 ~G~~~~~~~~~GDLiv~i~v~~~~~f~r~G~DL~~~~~Isl~eAl~G~~~~i~tldG-~i~v~ip~g~~~g~~~ri~g~G 318 (378)
T PRK14283 240 EGEMGDRGGEPGDLYVVIKVKPHKIFRREGANLYYEKPISFVQAALGDTVDVPTIDG-PVELKIPAGTQSGTTFRLKGHG 318 (378)
T ss_pred cccCCCCCCCCccEEEEEEEEcCCCEEEecCCEEEEEecCHHHHhcCCeEEEEcCCc-eEEEEeCCCCCCCCEEEECCCC
Confidence 999864 56799999999999999999999999999999999999999999999999 5999999999999999999999
Q ss_pred cCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHhC
Q 022539 254 MPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALG 291 (295)
Q Consensus 254 ~p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~~l~~~l~ 291 (295)
||... ...+|||||+|+|.||+.|+++|+++|++++.
T Consensus 319 ~p~~~-~~~~GdL~v~~~v~~P~~l~~~q~~ll~~~~~ 355 (378)
T PRK14283 319 MPSLR-WSGKGNLYVKVKVVVPKKLSPKQKELLREFAS 355 (378)
T ss_pred CCCCC-CCCCCCEEEEEEEEeCCCCCHHHHHHHHHHHh
Confidence 99765 34689999999999999999999999999985
No 25
>PRK14290 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2.9e-62 Score=458.65 Aligned_cols=288 Identities=31% Similarity=0.487 Sum_probs=236.1
Q ss_pred CCCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCccC--
Q 022539 1 MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASD-- 78 (295)
Q Consensus 1 m~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~-- 78 (295)
|.+|||+||||+++||.+|||+|||+||++||||+|+++.++|+++|++|++||++|+|+.+|+.||+||+.++++++
T Consensus 1 m~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~G~~~~~~~~~~ 80 (365)
T PRK14290 1 MAKDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKRRQYDQTGTVDFGAGGSN 80 (365)
T ss_pred CCCChhhhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHHHHHHHHHHHHHHHhcChhhhhhhcccCCcccccCCCC
Confidence 789999999999999999999999999999999999865447899999999999999999999999999998875321
Q ss_pred CCCCCC--CCCCCCCccccCCCC-C--CCCCC-CCC-CCCCCCCCeeeecccCHHHHhcCceeEEEEeEEeeC----C--
Q 022539 79 FGTPSY--HHPHDTKPCATRNNN-N--NNHRA-GGA-GPKPTPTPIETQLLCTLEELYKGARKKMKISRVLPD----H-- 145 (295)
Q Consensus 79 ~g~~~~--~~~~~~~~f~~~~~~-~--~~f~~-~~~-~~~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~----g-- 145 (295)
++.++| |.+. .+.|..+.++ + +.|++ +.. ..++++.|+++.|.|||+|+|+|+++++.+.+.+.| |
T Consensus 81 ~~~~~~~~~~~~-~d~f~~~fg~~~~~~~~~~~~~~~~~~~~~~di~~~l~lsLee~~~G~~~~i~~~r~~~C~~C~G~g 159 (365)
T PRK14290 81 FNWDNFTHFSDI-NDIFNQIFGGNFGSDFFSGFGNQQSTRNIDLDIYTNLDISLEDAYYGTEKRIKYRRNAMCPDCSGTG 159 (365)
T ss_pred ccccccccccch-hHHHHHHhcCccccccccccccccCCCCCCCCEEEEEEecHHHhcCCEEEEEEeeecccCCCCcccc
Confidence 111111 1100 0112111000 0 00111 001 112347899999999999999999999999765432 1
Q ss_pred --------------CC---------------------------------------cEEEEEEEEEEEeCCCCcCCCeEec
Q 022539 146 --------------FG---------------------------------------KPITVQEILKIDIKPGWKKGTKITF 172 (295)
Q Consensus 146 --------------~G---------------------------------------~~~~~~~~l~V~Ip~G~~~G~~i~~ 172 (295)
.| .++.+.++++|.||||+.+|++|+|
T Consensus 160 ~~~~~~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~ 239 (365)
T PRK14290 160 AKNGKLITCPTCHGTGQQRIVRGQGFFRMVTVTTCRTCGGRGRIPEEKCPRCNGTGTVVVNEDISVKIPKGATDNLRLRV 239 (365)
T ss_pred CCCCCCccCCCCCCcCEEEEEeccCeEEEEEEEeCCCCCCceeEccCCCCCCCCceeEEEeeEEEEEECCCCCCCcEEEE
Confidence 11 1355678999999999999999999
Q ss_pred CCCCCCCCCCCCccEEEEEEEeCCcceeecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCCCCCCcEEEEcCC
Q 022539 173 PEKGNQEPGLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNE 252 (295)
Q Consensus 173 ~g~G~~~~~~~~GDliv~i~v~~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~~~~g~~~rl~g~ 252 (295)
+|+|++ +++.+|||+|+|++++|+.|+|+|+||+++++|||.+|++|+++.|+|++|+ ++|+||+++++|++++|+|+
T Consensus 240 ~g~G~~-~~~~~GDL~v~v~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~I~~~~g~-i~V~Ip~g~~~g~~iri~g~ 317 (365)
T PRK14290 240 KGKGQS-YGGRTGDLYVVLRVNNDPNIQRINDDLYVDQKINFPQAALGGEIEIKLFREK-YNLKIPEGTQPGEVLKIKGA 317 (365)
T ss_pred ccccCC-CCCCCCCEEEEEEEcCCCCEEEecCCEEEEEEeCHHHHhCCCEEEEEcCCce-EEEEECCccCCCcEEEECCC
Confidence 999996 6788999999999999999999999999999999999999999999999995 99999999999999999999
Q ss_pred CcCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHhCC
Q 022539 253 GMPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALGG 292 (295)
Q Consensus 253 G~p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~~l~~~l~~ 292 (295)
|||.... ..+|||||+|+|.+|+.|+++++++|+++++.
T Consensus 318 G~p~~~~-~~~GDL~V~~~V~~P~~l~~~~~~ll~~~~~~ 356 (365)
T PRK14290 318 GMPHLNG-HGSGDLLVRINVEVPKRLTSKQKELIREFFDI 356 (365)
T ss_pred CCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHHh
Confidence 9997652 46899999999999999999999999999873
No 26
>PRK10767 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2.8e-62 Score=460.07 Aligned_cols=281 Identities=32% Similarity=0.513 Sum_probs=234.9
Q ss_pred CCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCccCC-C
Q 022539 2 GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASDF-G 80 (295)
Q Consensus 2 ~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~-g 80 (295)
.+|||+||||+++||.+|||+|||+||++||||+|+.+ +.|+++|++|++||++|+|+.+|+.||+||++++..+.. +
T Consensus 3 ~~d~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~ 81 (371)
T PRK10767 3 KRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGD-KEAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAFEQGGGGG 81 (371)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCc-HHHHHHHHHHHHHHHHhcchhhhhHhhhccccccccCCCCC
Confidence 47999999999999999999999999999999999754 468899999999999999999999999999988763211 1
Q ss_pred C-CCC--CCCCCCCccccCCCCCCCCCCC---CCCCCCCCCCeeeecccCHHHHhcCceeEEEEeEEeeC----CCC---
Q 022539 81 T-PSY--HHPHDTKPCATRNNNNNNHRAG---GAGPKPTPTPIETQLLCTLEELYKGARKKMKISRVLPD----HFG--- 147 (295)
Q Consensus 81 ~-~~~--~~~~~~~~f~~~~~~~~~f~~~---~~~~~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~----g~G--- 147 (295)
+ +++ |.+...+.|+. .|+++ +...++++.|+.+.|.|||+|+|+|+++++.+.+.+.| |+|
T Consensus 82 ~~~~~~~~~~~f~~~f~~------~fgg~~~~~~~~~~~g~di~~~l~vsLee~~~G~~~~v~~~r~~~C~~C~G~G~~~ 155 (371)
T PRK10767 82 GFGGGGGFGDIFGDIFGD------IFGGGRGGGRQRARRGADLRYNMEITLEEAVRGVTKEIRIPTLVTCDTCHGSGAKP 155 (371)
T ss_pred CCCCccccccchhhhhhh------hccCCccccCCCCCCCCCeEEEEEeehHHhhCCeeEEEeeeecccCCCCCCcccCC
Confidence 1 010 11000011221 12211 11234578999999999999999999999999875431 111
Q ss_pred -------------------------------------------------cEEEEEEEEEEEeCCCCcCCCeEecCCCCCC
Q 022539 148 -------------------------------------------------KPITVQEILKIDIKPGWKKGTKITFPEKGNQ 178 (295)
Q Consensus 148 -------------------------------------------------~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~ 178 (295)
.++.+.++++|.||||+++|++|+|+|+|++
T Consensus 156 ~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~ 235 (371)
T PRK10767 156 GTSPKTCPTCHGAGQVRMQQGFFTVQQTCPTCHGRGKIIKDPCKKCHGQGRVEKEKTLSVKIPAGVDTGDRIRLSGEGEA 235 (371)
T ss_pred CCCCccCCCCCCeeEEEEeeceEEEEEeCCCCCCceeECCCCCCCCCCCceEeeeeeEEEecCCCCCCCcEEEEecCccC
Confidence 1345668899999999999999999999998
Q ss_pred C-CCCCCccEEEEEEEeCCcceeecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCCCCCCcEEEEcCCCcCCC
Q 022539 179 E-PGLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGMPIS 257 (295)
Q Consensus 179 ~-~~~~~GDliv~i~v~~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~~~~g~~~rl~g~G~p~~ 257 (295)
. ++..+|||+|+|+++||+.|+|+|+||++++.|||++|++|+++.|+|+|| ++.|+||+++++|++++|+|+|||..
T Consensus 236 ~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldG-~i~v~ip~g~~~g~~~~i~g~G~p~~ 314 (371)
T PRK10767 236 GERGGPAGDLYVQIHVKEHPIFERDGNDLYCEVPISFTTAALGGEIEVPTLDG-RVKLKIPEGTQTGKLFRLRGKGVKSV 314 (371)
T ss_pred CCCCCCCcCEEEEEEEeeCCCEEEecCCEEEEEEeCHHHHhCCCeEEEecCCC-cEEEEeCCCCCCCCEEEECCCCcCCC
Confidence 5 466799999999999999999999999999999999999999999999999 59999999999999999999999976
Q ss_pred CCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHhC
Q 022539 258 KDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALG 291 (295)
Q Consensus 258 ~~~~~~GDL~v~~~v~~P~~l~~~~~~~l~~~l~ 291 (295)
+ .+.+|||||+|+|.+|+.|+++++++|++++.
T Consensus 315 ~-~~~~GDL~v~~~v~~P~~l~~~~~~ll~~l~~ 347 (371)
T PRK10767 315 R-SGARGDLYCQVVVETPVNLTKRQKELLEEFEE 347 (371)
T ss_pred C-CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence 5 35689999999999999999999999999985
No 27
>TIGR02349 DnaJ_bact chaperone protein DnaJ. This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.
Probab=100.00 E-value=1.2e-61 Score=453.58 Aligned_cols=284 Identities=32% Similarity=0.536 Sum_probs=233.3
Q ss_pred CccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCccCCC-CC
Q 022539 4 DYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASDFG-TP 82 (295)
Q Consensus 4 d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~g-~~ 82 (295)
|||+||||+++||.+|||+|||+||++||||+|+. ++++++|++|++||++|+|+.+|+.||+||+++++.+.++ ++
T Consensus 1 d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~--~~~~~~f~~i~~Ay~vL~d~~~R~~yd~~g~~~~~~~~~~~~~ 78 (354)
T TIGR02349 1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKD--KEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGGGGGGG 78 (354)
T ss_pred ChHHhCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC--ccHHHHHHHHHHHHHHhhChHHHHhhhhcccccccccCcCCCC
Confidence 79999999999999999999999999999999973 4578999999999999999999999999999887643221 11
Q ss_pred CCCCCCCCCccccCCCCC-CCCCCC----C--CCCCCCCCCeeeecccCHHHHhcCceeEEEEeEEeeC----CCC----
Q 022539 83 SYHHPHDTKPCATRNNNN-NNHRAG----G--AGPKPTPTPIETQLLCTLEELYKGARKKMKISRVLPD----HFG---- 147 (295)
Q Consensus 83 ~~~~~~~~~~f~~~~~~~-~~f~~~----~--~~~~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~----g~G---- 147 (295)
+ |++.+.+.|+.+..-| ..|+++ . ...+++++|+.+.|.|||+|+|+|+++++.+.|.+.| |+|
T Consensus 79 ~-~~~~~~~~~~~~~~~f~~~fg~~~g~~~~~~~~~~~~~d~~~~l~vsLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~ 157 (354)
T TIGR02349 79 G-FNGFDIGFFGDFGDIFGDFFGGGGGSGRRRRSGPRRGEDLRYDLELTFEEAVFGVEKEIEIPRKESCETCHGTGAKPG 157 (354)
T ss_pred C-cCCccccCcCchhhhHHHHhccCcccCccccCCCCCCCCeEEEEEEEHHHHhCCeeEEEEeecCCcCCCCCCCCCCCC
Confidence 1 1110000111000000 012211 0 1234578899999999999999999999999876432 111
Q ss_pred ----------------------------------------------------cEEEEEEEEEEEeCCCCcCCCeEecCCC
Q 022539 148 ----------------------------------------------------KPITVQEILKIDIKPGWKKGTKITFPEK 175 (295)
Q Consensus 148 ----------------------------------------------------~~~~~~~~l~V~Ip~G~~~G~~i~~~g~ 175 (295)
.++.+.+.++|.||||+++|++|+|+|+
T Consensus 158 ~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~ 237 (354)
T TIGR02349 158 TDPKTCPTCGGTGQVRRQQGTPFGFFQQQQTCPTCGGEGKIIKEPCSTCKGKGRVKERKTITVKIPAGVDTGQRLRVSGK 237 (354)
T ss_pred CCCccCCCCCCeeEEEEEEeccCCceEEEEecCCCCCcceecCCCCCCCCCCcEecccceEEEEECCCCCCCCEEEEecC
Confidence 0345567899999999999999999999
Q ss_pred CCCCC-CCCCccEEEEEEEeCCcceeecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCCCCCCcEEEEcCCCc
Q 022539 176 GNQEP-GLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGM 254 (295)
Q Consensus 176 G~~~~-~~~~GDliv~i~v~~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~~~~g~~~rl~g~G~ 254 (295)
|++.+ +..+|||+|+|++++|+.|+|+|+||++++.|||++|++|+++.|+|+|| +++|.||+++++|++++|+|+||
T Consensus 238 G~~~~~~~~~GDl~v~i~v~~h~~f~r~g~DL~~~~~isl~eAl~G~~~~i~~ldG-~i~v~ip~g~~~g~~~~i~g~G~ 316 (354)
T TIGR02349 238 GNAGENGGPNGDLYVVIRVKPHKIFERDGNDLYIEVPISFTQAILGGEIEVPTLDG-DVKLKIPAGTQSGTVFRLKGKGV 316 (354)
T ss_pred ccCCCCCCCCCCEEEEEEEecCcceEEecCCEEEEEEeCHHHHhCCCeEEEecCCc-eEEEEECCcccCCcEEEECCCCc
Confidence 99864 56789999999999999999999999999999999999999999999999 59999999999999999999999
Q ss_pred CCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHhCC
Q 022539 255 PISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALGG 292 (295)
Q Consensus 255 p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~~l~~~l~~ 292 (295)
|.... ..+|||||+|+|.+|+.|+++|+++|+++|..
T Consensus 317 p~~~~-~~~GDL~i~~~v~~P~~l~~~~~~~l~~~~~~ 353 (354)
T TIGR02349 317 PRLRG-NGRGDLLVTVKVETPKNLSKEQKELLEELAEA 353 (354)
T ss_pred CCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhh
Confidence 97652 47899999999999999999999999999864
No 28
>PRK10266 curved DNA-binding protein CbpA; Provisional
Probab=100.00 E-value=1.3e-60 Score=437.85 Aligned_cols=283 Identities=24% Similarity=0.393 Sum_probs=232.7
Q ss_pred CCCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCC----CCc
Q 022539 1 MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEG----LKA 76 (295)
Q Consensus 1 m~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~----~~~ 76 (295)
-.+|||++|||+++||.+|||+|||+||++||||+|++ +.++++|++|++||++|+||.+|+.||+||..+ +..
T Consensus 2 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~k~HPD~~~~--~~~~~~f~~i~~Ay~~L~~~~kr~~yD~~g~~~~~~~~~~ 79 (306)
T PRK10266 2 ELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKE--PDAEARFKEVAEAWEVLSDEQRRAEYDQLWQHRNDPQFNR 79 (306)
T ss_pred CcCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--ccHHHHHHHHHHHHHHhhhHHHHHHHHHhhccccCccccc
Confidence 04899999999999999999999999999999999875 468999999999999999999999999998642 221
Q ss_pred c-CCCCCCCCCCCCC-CccccCCCCCCCCCCC-CCCCCCCCCCeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEE-E
Q 022539 77 S-DFGTPSYHHPHDT-KPCATRNNNNNNHRAG-GAGPKPTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPIT-V 152 (295)
Q Consensus 77 ~-~~g~~~~~~~~~~-~~f~~~~~~~~~f~~~-~~~~~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~-~ 152 (295)
+ .+++++.|+..+. ..|+...+ .+++. ....++++.|+.+++.|||+|+|+||.+++.+.+.+|++.|.+.. .
T Consensus 80 ~~~~~~~~~~~~~~~~~~f~~~~g---~~~~~~~~~~~~kg~di~~~v~isLee~~~G~~k~i~~~~~~~~g~G~~~~~~ 156 (306)
T PRK10266 80 QFQHGDGQSFNAEDFDDIFSSIFG---QHARQSRQRPAARGHDIEIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEI 156 (306)
T ss_pred ccccCCCCCCCCCCHHHHHHHHhC---CCCCCCCCCCCCCCCceEEEEEEEHHHhcCCceEEEEEecccccCCCeEEEee
Confidence 1 0111100111010 11111000 00100 112345688999999999999999999999999988887774322 2
Q ss_pred EEEEEEEeCCCCcCCCeEecCCCCCCCC-CCCCccEEEEEEEeCCcceeecCCceEEEEEecHHHHhcCCEEEEeccCCc
Q 022539 153 QEILKIDIKPGWKKGTKITFPEKGNQEP-GLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGR 231 (295)
Q Consensus 153 ~~~l~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDliv~i~v~~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~ 231 (295)
.++++|.||+|+++|++|+++|+|++.. +..+|||+|+|+++||+.|+|+|+||+++++||+.+|++|+++.|+|++|+
T Consensus 157 ~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~v~i~v~ph~~f~r~g~DL~~~~~Isl~~al~G~~~~i~~~~g~ 236 (306)
T PRK10266 157 PKTLNVKIPAGVGNGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPLAPWEAALGAKVTVPTLKES 236 (306)
T ss_pred eEEEEEEECCCCcCCcEEEEecCCcCCCCCCCCccEEEEEEEcCCCCeEEeCCceEEEEecCHHHHhCCCEEEeeCCCcc
Confidence 3579999999999999999999999864 567899999999999999999999999999999999999999999999997
Q ss_pred EEEEeeCCCCCCCcEEEEcCCCcCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHhCC
Q 022539 232 NLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALGG 292 (295)
Q Consensus 232 ~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~~l~~~l~~ 292 (295)
+.|+||+++++|+++||+|+|||..+ .+|||||+|+|.+|+.|+++|+++|++++..
T Consensus 237 -v~v~ip~g~~~g~~~ri~g~G~p~~~---~~GdL~v~~~v~~P~~l~~~q~~l~~~l~~~ 293 (306)
T PRK10266 237 -ILLTIPPGSQAGQRLRVKGKGLVSKK---QTGDLYAVLKIVMPPKPDEKTAALWQQLADA 293 (306)
T ss_pred -EEEEeCCCcCCCCEEEECCCCCCCCC---CCCCEEEEEEEECCCCCCHHHHHHHHHHHhh
Confidence 89999999999999999999999643 5899999999999999999999999999864
No 29
>PRK14293 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2.2e-60 Score=447.31 Aligned_cols=287 Identities=30% Similarity=0.499 Sum_probs=233.8
Q ss_pred CCCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCcc-CC
Q 022539 1 MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKAS-DF 79 (295)
Q Consensus 1 m~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~-~~ 79 (295)
|..|||+||||+++||.+|||+|||+||++||||+|++ +.|+++|++|++||++|+||.+|+.||+||+++++++ ++
T Consensus 1 ~~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~--~~a~~~f~~i~~Ay~vL~~~~~R~~yd~~g~~g~~~~~~~ 78 (374)
T PRK14293 1 MAADYYEILGVSRDADKDELKRAYRRLARKYHPDVNKE--PGAEDRFKEINRAYEVLSDPETRARYDQFGEAGVSGAAGF 78 (374)
T ss_pred CCCChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCC--cCHHHHHHHHHHHHHHHhchHHHHHHhhccccccccCCCc
Confidence 78999999999999999999999999999999999975 3588999999999999999999999999999877632 11
Q ss_pred CC-CCC--CCCCCCCccccCCCCCCCCCCC-CCCCCCCCCCeeeecccCHHHHhcCceeEEEEeEEeeC----C------
Q 022539 80 GT-PSY--HHPHDTKPCATRNNNNNNHRAG-GAGPKPTPTPIETQLLCTLEELYKGARKKMKISRVLPD----H------ 145 (295)
Q Consensus 80 g~-~~~--~~~~~~~~f~~~~~~~~~f~~~-~~~~~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~----g------ 145 (295)
++ +++ |.+...+.|++++ +.+..+.+ ....+.++.|+++.|.|||+|+|+|+++++.+.|.+.| |
T Consensus 79 ~~~~~~~~~~d~f~~~fg~~~-~~~~~~~~~~~~~~~kg~di~~~l~vsLee~~~G~~k~i~~~r~~~C~~C~G~G~~~~ 157 (374)
T PRK14293 79 PDMGDMGGFADIFETFFSGFG-GAGGQGGRRRRRGPQRGDDLRYDLKLDFREAIFGGEKEIRIPHLETCETCRGSGAKPG 157 (374)
T ss_pred CCcccccchHHHHHHHhcccC-CCCCCCccccccCccCCCCeEEEEEeeHHHHhCCceEEEEeeccccCCCCCCcCCCCC
Confidence 11 111 1000001222100 00000000 01224568899999999999999999999999875422 1
Q ss_pred -----------CCc---------------------------------------EEEEEEEEEEEeCCCCcCCCeEecCCC
Q 022539 146 -----------FGK---------------------------------------PITVQEILKIDIKPGWKKGTKITFPEK 175 (295)
Q Consensus 146 -----------~G~---------------------------------------~~~~~~~l~V~Ip~G~~~G~~i~~~g~ 175 (295)
.|. ++.+.++++|.||||+++|++|+|+|+
T Consensus 158 ~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~IppG~~~G~~i~l~g~ 237 (374)
T PRK14293 158 TGPTTCSTCGGAGQVRRATRTPFGSFTQVSECPTCNGTGQVIEDPCDACGGQGVKQVTKKLKINIPAGVDTGTRLRVSGE 237 (374)
T ss_pred CCCeeCCCCCCcceEEEEEecCcceEEEEeeCCCCCcceeEeccCCCCCCCCcccccceEEEEEeCCCCCCCCEEEEccC
Confidence 111 234456789999999999999999999
Q ss_pred CCCCC-CCCCccEEEEEEEeCCcceeecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCCCCCCcEEEEcCCCc
Q 022539 176 GNQEP-GLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGM 254 (295)
Q Consensus 176 G~~~~-~~~~GDliv~i~v~~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~~~~g~~~rl~g~G~ 254 (295)
|++.. +..+|||+|+|++++|+.|+|+|+||+++++|||.+|++|+++.|+|+||+ ++|+||+++++|+++||+|+||
T Consensus 238 G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldG~-~~i~ip~~~~~g~~~ri~g~G~ 316 (374)
T PRK14293 238 GDAGLRGGPPGDLYVYLFVKNDPEFRRDGINILSEIKISYLQAILGDTLEVDTVDGP-VELTIPAGTQPNTVLTLENKGV 316 (374)
T ss_pred ccCCCCCCCCcCEEEEEEEeCCCccChhhhceEEEeccCHHHHhCCCEEEecCCCCC-EEEEeCCCCCCCCEEEECCCCC
Confidence 99864 567899999999999999999999999999999999999999999999997 8999999999999999999999
Q ss_pred CCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHhC
Q 022539 255 PISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALG 291 (295)
Q Consensus 255 p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~~l~~~l~ 291 (295)
|..+..+.+|||||+|+|.||+.|+++++++|++++.
T Consensus 317 p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~l~~~l~~ 353 (374)
T PRK14293 317 PRLGNPVARGDHLITVKVKIPTRISDEERELLEKLAK 353 (374)
T ss_pred CCCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence 9765445689999999999999999999999999985
No 30
>PRK14289 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=8.4e-60 Score=445.22 Aligned_cols=286 Identities=31% Similarity=0.540 Sum_probs=234.9
Q ss_pred CCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCccC---
Q 022539 2 GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASD--- 78 (295)
Q Consensus 2 ~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~--- 78 (295)
.+|||++|||+++||.+|||+|||+||++||||+|+.+ ++|+++|++|++||++|+||.+|++||+||+++++.+.
T Consensus 4 ~~~~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~-~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~G~~~~~~~~~~~ 82 (386)
T PRK14289 4 KRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGD-KEAEEKFKEAAEAYDVLSDPDKRSRYDQFGHAGVGGAAGGG 82 (386)
T ss_pred cCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC-hHHHHHHHHHHHHHHHhcCHHHHHHHHHhcccccccCCCCC
Confidence 57999999999999999999999999999999999864 56899999999999999999999999999998775321
Q ss_pred -CCCCCCCCCCC-----CCccccCCCCCCC---CCCC-CCCCCCCCCCeeeecccCHHHHhcCceeEEEEeEEeeC----
Q 022539 79 -FGTPSYHHPHD-----TKPCATRNNNNNN---HRAG-GAGPKPTPTPIETQLLCTLEELYKGARKKMKISRVLPD---- 144 (295)
Q Consensus 79 -~g~~~~~~~~~-----~~~f~~~~~~~~~---f~~~-~~~~~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~---- 144 (295)
+++++ ++..+ ...|++..++++. ++.+ ....+.++.|+++.|.|||+|+|+|+++++.+.+.+.|
T Consensus 83 ~~~~~~-~~~~~~f~~f~~~fg~~~gg~~~~~~~~~~~~~~~~~~g~di~~~l~vsLee~~~G~~~~i~~~r~~~C~~C~ 161 (386)
T PRK14289 83 GFSGEG-MSMEDIFSMFGDIFGGHGGGFGGFGGFGGGGSQQRVFRGSDLRVKVKLNLKEISTGVEKKFKVKKYVPCSHCH 161 (386)
T ss_pred CCCCCC-cChhhhhHHhhhhhcccccCcccccccccccccCCCCCCCCeEEEEEEEHHHhhCCeEEEEEEEeecccCCCC
Confidence 11111 11000 0112211001000 0100 01123468899999999999999999999999876432
Q ss_pred CCC--------------------------------------------------------cEEEEEEEEEEEeCCCCcCCC
Q 022539 145 HFG--------------------------------------------------------KPITVQEILKIDIKPGWKKGT 168 (295)
Q Consensus 145 g~G--------------------------------------------------------~~~~~~~~l~V~Ip~G~~~G~ 168 (295)
|+| .++.+.++++|.||+|+++|+
T Consensus 162 G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~ 241 (386)
T PRK14289 162 GTGAEGNNGSETCPTCKGSGSVTRVQNTILGTMQTQSTCPTCNGEGKIIKKKCKKCGGEGIVYGEEVITVKIPAGVAEGM 241 (386)
T ss_pred CCCCCCCCCCCcCCCCcCeEEEEEEEecccceEEEEEecCCCCccccccCcCCCCCCCCcEEeeeEEEEEEeCCCCCCCC
Confidence 111 134566789999999999999
Q ss_pred eEecCCCCCCCC-CCCCccEEEEEEEeCCcceeecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCCCCCCcEE
Q 022539 169 KITFPEKGNQEP-GLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEV 247 (295)
Q Consensus 169 ~i~~~g~G~~~~-~~~~GDliv~i~v~~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~~~~g~~~ 247 (295)
+|+++|+|++.. +..+|||+|+|++++|+.|+|+|+||++++.|||.+|++|+++.|+|++|+ ++|+||+++++|+++
T Consensus 242 ~i~l~g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~-i~v~ip~g~~~g~~~ 320 (386)
T PRK14289 242 QLSMNGKGNAGKHGGVNGDLLVVIEEEPHPELIRDENDLIYNLLLSVPTAALGGAVEVPTIDGK-AKVKIEAGTQPGKVL 320 (386)
T ss_pred EEEEeccccCCCCCCCCccEEEEEEEecCCcccccccceeEEeccCHHHHhCCCeEEeecCCce-EEEEECCccCCCcEE
Confidence 999999999874 677999999999999999999999999999999999999999999999996 899999999999999
Q ss_pred EEcCCCcCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHhC
Q 022539 248 VIPNEGMPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALG 291 (295)
Q Consensus 248 rl~g~G~p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~~l~~~l~ 291 (295)
||+|+|||..+. +.+|||||+|+|.||+.|+++|+++|++++.
T Consensus 321 ri~g~G~p~~~~-~~~GDL~v~~~v~~P~~l~~~q~~~l~~l~~ 363 (386)
T PRK14289 321 RLRNKGLPSVNG-YGTGDLLVNVSVYIPETLSKEEKQTLEKMEN 363 (386)
T ss_pred EECCCCcCCCCC-CCCCcEEEEEEEEeCCCCCHHHHHHHHHHHh
Confidence 999999997652 4689999999999999999999999999986
No 31
>PRK14292 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.7e-59 Score=441.17 Aligned_cols=282 Identities=29% Similarity=0.473 Sum_probs=230.6
Q ss_pred CCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCccCCCC
Q 022539 2 GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASDFGT 81 (295)
Q Consensus 2 ~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~g~ 81 (295)
+.|||++|||+++||.+|||+|||+||++||||+|++ .+|+++|++|++||++|+||.+|+.||+||+++..+...++
T Consensus 1 ~~d~y~~Lgv~~~a~~~~ik~ayr~l~~~~hpD~~~~--~~a~~~~~~i~~Ay~vL~d~~~r~~yd~~G~~~~~~~~~~~ 78 (371)
T PRK14292 1 MMDYYELLGVSRTASADEIKSAYRKLALKYHPDRNKE--KGAAEKFAQINEAYAVLSDAEKRAHYDRFGTAPGAGMPGGD 78 (371)
T ss_pred CCChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCC--hhHHHHHHHHHHHHHHhcchhhhhhHhhcCCcccccccCCc
Confidence 3699999999999999999999999999999999974 46889999999999999999999999999987642111000
Q ss_pred --CCC-CCCCCCCccccCCCCCCCCCCC-CCCCCCCCCCeeeecccCHHHHhcCceeEEEEeEEeeC----C--------
Q 022539 82 --PSY-HHPHDTKPCATRNNNNNNHRAG-GAGPKPTPTPIETQLLCTLEELYKGARKKMKISRVLPD----H-------- 145 (295)
Q Consensus 82 --~~~-~~~~~~~~f~~~~~~~~~f~~~-~~~~~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~----g-------- 145 (295)
+++ |+.. +.|..+.++. .++++ +...+.++.|+++.+.|||+|+|+|+++++.+.+.+.| |
T Consensus 79 ~~~~~~~d~~--d~f~~~fg~~-~~~~~~~~~~~~~g~d~~~~l~~sLee~~~G~~~~v~~~r~~~C~~C~G~G~~~~~~ 155 (371)
T PRK14292 79 PFGGMGFDPM--DIFEQLFGGA-GFGGGRGRRGPARGDDLETEARITLEQARAGEEVEVEVDRLTECEHCHGSRTEPGGK 155 (371)
T ss_pred ccCccCCChH--HHHHHhhCCC-CcCCCCCcccccCCCCeEEEEeccHHHHcCCeEEEEEEEeeecCCCCcccccCCCCC
Confidence 111 2110 1122110000 01100 01234578899999999999999999999999875421 1
Q ss_pred ----------CCc---------------------------------------EEEEEEEEEEEeCCCCcCCCeEecCCCC
Q 022539 146 ----------FGK---------------------------------------PITVQEILKIDIKPGWKKGTKITFPEKG 176 (295)
Q Consensus 146 ----------~G~---------------------------------------~~~~~~~l~V~Ip~G~~~G~~i~~~g~G 176 (295)
+|. ++...++++|.||+|+++|++|+|+|+|
T Consensus 156 ~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~G~G 235 (371)
T PRK14292 156 PPKTCPTCRGAGAVRAQARTIFGVVETQQPCPTCRGEGQIITDPCTVCRGRGRTLKAETVKVKLPRGIDEGYRIRVAGMG 235 (371)
T ss_pred CCccCCCCCCccEEEEEEeccCceEEEeeecCCCcccceecCCCCCCCCCceEEeecceEEEEECCCCCCCcEEEEecCc
Confidence 110 2344578999999999999999999999
Q ss_pred CCCCCCCCccEEEEEEEeCCcceeecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCCCCCCcEEEEcCCCcCC
Q 022539 177 NQEPGLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGMPI 256 (295)
Q Consensus 177 ~~~~~~~~GDliv~i~v~~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~~~~g~~~rl~g~G~p~ 256 (295)
++.+++. |||+|+|++++|+.|+|+|+||++++.|||.+|++|+++.|+|++|+ +.|+||+++++|++++|+|+|||.
T Consensus 236 ~~~~~~~-GDL~v~i~v~~h~~f~r~g~dL~~~~~isl~eAl~G~~~~i~tldG~-~~v~ip~g~~~g~~~~i~g~G~p~ 313 (371)
T PRK14292 236 NEGPGGN-GDLYVHIEMEPHPELRREQEHLIYEARIGFAKAALGGQITVPTLDGP-QVIEVKPGTQHGDLHRLRGQGMPR 313 (371)
T ss_pred CCCCCCC-CCEEEEEEEecCCccccchhceeEEeccCHHHHhCCCeEEEECCCCC-EEEecCCCcCCCcEEEECCCCCCC
Confidence 9977665 99999999999999999999999999999999999999999999997 589999999999999999999997
Q ss_pred CCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHhC
Q 022539 257 SKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALG 291 (295)
Q Consensus 257 ~~~~~~~GDL~v~~~v~~P~~l~~~~~~~l~~~l~ 291 (295)
... ..+|||||+|+|.+|+.|+++|+++|++++.
T Consensus 314 ~~~-~~~GDL~V~~~v~~P~~l~~~q~~ll~~~~~ 347 (371)
T PRK14292 314 LQG-AGTGDLIVEYEIAVPKQLSPEAREALEAYAR 347 (371)
T ss_pred CCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence 652 4679999999999999999999999999985
No 32
>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=6.6e-60 Score=427.49 Aligned_cols=270 Identities=42% Similarity=0.693 Sum_probs=236.5
Q ss_pred CCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCccCCCC
Q 022539 2 GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASDFGT 81 (295)
Q Consensus 2 ~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~g~ 81 (295)
+..||+||||+++||.+|||+|||+||++||||+||+ +.++|++|++||||||||++|++||+||+++++.+++|+
T Consensus 3 ~~~~y~il~v~~~As~~eikkayrkla~k~HpDkn~~----~~ekfkei~~AyevLsd~ekr~~yD~~g~~~~~~g~~~~ 78 (337)
T KOG0712|consen 3 NTKLYDILGVSPDASEEEIKKAYRKLALKYHPDKNPD----AGEKFKEISQAYEVLSDPEKREIYDQYGEEGLQGGGGGG 78 (337)
T ss_pred ccccceeeccCCCcCHHHHHHHHHHHHHHhCCCCCcc----HHHHHHHHHHHHHHhcCHHHHHHHHhhhhhhhcccCCCC
Confidence 4689999999999999999999999999999999986 689999999999999999999999999999998766543
Q ss_pred CCC-CCCCCCCccccCCCCCCCCCCCCCCCCCCCCCeeeecccCHHHHhcCceeEEEEeEEeeCC----C----------
Q 022539 82 PSY-HHPHDTKPCATRNNNNNNHRAGGAGPKPTPTPIETQLLCTLEELYKGARKKMKISRVLPDH----F---------- 146 (295)
Q Consensus 82 ~~~-~~~~~~~~f~~~~~~~~~f~~~~~~~~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g----~---------- 146 (295)
+.+ |+ .+|+ |++.+++...+++|+.+.+.|||+|+|.|.++++.++++++|. .
T Consensus 79 g~~~f~----~~F~--------~g~~~~~~~~rg~~~~~~~~~~Le~~y~G~s~kl~l~~~~iCs~C~GsGgksg~~~~C 146 (337)
T KOG0712|consen 79 GFGGFS----QFFG--------FGGNGGRGRQRGKDVVHQLKVTLEELYMGKSKKLFLSRNFICSKCSGSGGKSGSAPKC 146 (337)
T ss_pred CCccHH----Hhcc--------CCCcCccccccCCCceEEEEEEHHHhhcCCccceecccCccCCcCCCCCCCCCCCCCC
Confidence 221 21 1222 2222223334499999999999999999999999998875520 0
Q ss_pred ------C------------------------------------------cEEEEEEEEEEEeCCCCcCCCeEecCCCCCC
Q 022539 147 ------G------------------------------------------KPITVQEILKIDIKPGWKKGTKITFPEKGNQ 178 (295)
Q Consensus 147 ------G------------------------------------------~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~ 178 (295)
| +++...+.++|.|++|++++++|.+.|++++
T Consensus 147 ~~C~GsGv~~~~~~~gPg~~qs~q~~C~~C~G~G~~~~~kd~C~~C~G~~~v~~kkil~v~V~~g~~~~~ki~f~geade 226 (337)
T KOG0712|consen 147 TTCRGSGVQTRTRQMGPGMVQSPQLVCDSCNGSGETISLKDRCKTCSGAKVVREKKILEVHVEPGMPHGQKITFKGEADE 226 (337)
T ss_pred CCCCCCCceeEEEeccccccccceeEeccCCCccccccccccCcccccchhhhhhheeeccccCCCcccceeeeeeeeee
Confidence 0 0456678899999999999999999999999
Q ss_pred CCCCCCccEEEEEEEeCCcceeecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCC--CCCCCcEEEEcCCCcCC
Q 022539 179 EPGLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTD--IIQPGSEVVIPNEGMPI 256 (295)
Q Consensus 179 ~~~~~~GDliv~i~v~~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~--~~~~g~~~rl~g~G~p~ 256 (295)
.++..+||+++.+..++|+.|.|.|+||++..+|++.||++|+.+.+.|+||+.+.+.+++ ++++|++++|+|+|||.
T Consensus 227 a~g~~pgD~vl~i~~k~h~~F~Rrg~dL~~~~~i~l~eal~G~~~~~~~ldGr~l~~~~~pg~vi~~~~~~~v~~~gmp~ 306 (337)
T KOG0712|consen 227 APGTKPGDVVLLIDQKEHPGFDRRGSDLYRKLTISLVEALCGFQRVWETLDGRLLKLSSKPGEVISPGDTKRVEGEGMPI 306 (337)
T ss_pred cCCCcCccEEEEecccccccceecccccceeeecchhhccccceEEEEccCCceEEEecCCCceeChhHEEeecCCCccc
Confidence 9998999999999999999999999999999999999999999999999999999999876 79999999999999999
Q ss_pred CCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHh
Q 022539 257 SKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRAL 290 (295)
Q Consensus 257 ~~~~~~~GDL~v~~~v~~P~~l~~~~~~~l~~~l 290 (295)
..++ +|||||+|+|+||+ +++++...|+.+|
T Consensus 307 ~~~~--~g~lyi~~~v~fp~-~~~~~~~~l~~~l 337 (337)
T KOG0712|consen 307 FRNP--KGDLYIKFEVKFPK-LSPSQLKMLEDLL 337 (337)
T ss_pred ccCC--CCcEEEEEEEEcCC-CChHHHHHHHhhC
Confidence 9865 99999999999999 9999999998875
No 33
>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.3e-43 Score=317.61 Aligned_cols=273 Identities=34% Similarity=0.557 Sum_probs=221.3
Q ss_pred CCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCccC---
Q 022539 2 GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASD--- 78 (295)
Q Consensus 2 ~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~--- 78 (295)
++|||+||||+++||..|||+||||||++||||+||++ +.|.+.|++|+.||||||||++|+.||+||++++...+
T Consensus 15 ~rDfYelLgV~k~Asd~eIKkAYRKLALk~HPDkNpdd-p~A~e~F~~in~AYEVLsDpekRk~YD~~GEegL~~~~~~~ 93 (336)
T KOG0713|consen 15 GRDFYELLGVPKNASDQEIKKAYRKLALKYHPDKNPDD-PNANEKFKEINAAYEVLSDPEKRKHYDTYGEEGLKDENKDG 93 (336)
T ss_pred CCCHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-HHHHHHHHHHHHHHHHhcCHHHHHHHHhhhHhhhccccccc
Confidence 58999999999999999999999999999999999986 78999999999999999999999999999999998432
Q ss_pred CCCCCCCCCCCCCccccCCCCCC-CCCCCC-CCCCCCCCCeeeecccCHHHHhcCceeE----------EEEeEEeeC--
Q 022539 79 FGTPSYHHPHDTKPCATRNNNNN-NHRAGG-AGPKPTPTPIETQLLCTLEELYKGARKK----------MKISRVLPD-- 144 (295)
Q Consensus 79 ~g~~~~~~~~~~~~f~~~~~~~~-~f~~~~-~~~~~~~~di~~~l~itl~e~~~G~~k~----------i~~~r~~~~-- 144 (295)
.++.+.+ .+|+..++.|+ .+++.. ....+++.++...+..+++++|.|...+ +...+.++|
T Consensus 94 ~~g~~~~-----~~f~~~f~dfg~~~~g~~~~e~~~~g~~V~~~~e~~~~h~y~~~~~e~~r~~~v~~~~~g~~~~~~~~ 168 (336)
T KOG0713|consen 94 EGGGGGN-----DIFSAFFGDFGVTVGGNPLEEALPKGSDVSSDLEKQLEHFYMGNFVEEVREKGVYKPAPGTRKCNCRL 168 (336)
T ss_pred ccCCccc-----chHHHhhcccccccCCCcccCCCCCCceEEeehhhchhhhhcccHHHHHhccCceeecCcccccCChh
Confidence 1111101 12221111110 011111 1446778899999999999998886332 222222221
Q ss_pred -------CCC----------------cEEEEEEEEEEEeCCCCcCCCeEecCCCCCCCCCCCCccEEEEEEEeCCcceee
Q 022539 145 -------HFG----------------KPITVQEILKIDIKPGWKKGTKITFPEKGNQEPGLPPADLIFVVEEKPHAVFQR 201 (295)
Q Consensus 145 -------g~G----------------~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDliv~i~v~~h~~f~r 201 (295)
+.| +........++.+..|...|....+..+|.+..-+.+||+++.+..-+||.|.|
T Consensus 169 ~~~~~~~~~g~~~~~q~~~~~~~~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~gD~~f~~~~y~~~~~~~ 248 (336)
T KOG0713|consen 169 EMFTQQEGPGRFQMLQEAVCDECPNVKLVLEEDPLEVEFERGDADGPEEIFELEGEPHIDGVPGDLFFKIVSYTHPRFER 248 (336)
T ss_pred hheeeccCCChhhhhhhhhhccCCccceeecCCceeeeeeecccCCceeeeeccCCcceecccCCceeeeEEecccceec
Confidence 112 145667789999999999999999999999888899999999999999999999
Q ss_pred cCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCCCCCCcEEEEcCCCcCCCCCCCCCCCEEEEEEEECCCC-CCH
Q 022539 202 DGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMFPSR-LTA 280 (295)
Q Consensus 202 ~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GDL~v~~~v~~P~~-l~~ 280 (295)
+++|+++++.+++.+++.|+...+.++|+..+.+....+..++..++.+++|||...+....|+++++|.+.+|.+ ++.
T Consensus 249 k~~~~~~n~~~sl~~~~v~~~~e~~~~d~~~~~~~r~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~t~~~~~~~~~~~~ 328 (336)
T KOG0713|consen 249 KGDDLYTNVTISLEAALVGFEMEILHLDGHYVEVSRKKITWPGARTRKKGEGMPLLKNRNEKGNLYVTFDVEFPKSSLSD 328 (336)
T ss_pred CccchhhHHHHHHHHHHHHHHHHhhccchhhhhhhhhhccccchhhhhhhccchhhhccchhcceeEEecccCcccccch
Confidence 9999999999999999999999999999987888888899999999999999997666678899999999999965 555
No 34
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ. This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.
Probab=100.00 E-value=5.2e-35 Score=284.81 Aligned_cols=157 Identities=17% Similarity=0.167 Sum_probs=144.6
Q ss_pred CeeeecccCHHHHhcCceeEEEEeEEeeCCCC-cEEEEEEEEEEEeCCCCcCCCeEecCCCCCCCCCCCCccEEEEEEEe
Q 022539 116 PIETQLLCTLEELYKGARKKMKISRVLPDHFG-KPITVQEILKIDIKPGWKKGTKITFPEKGNQEPGLPPADLIFVVEEK 194 (295)
Q Consensus 116 di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G-~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDliv~i~v~ 194 (295)
++...+.|||+++|+||+++|++.|.++|+.| +.+.+.++++|.||+|+++|++|+|+|+|++++++. |||+|+|+++
T Consensus 658 dI~y~l~vtLEeLY~G~tKkIKitR~V~~g~G~ktvkE~ktLeVkIPpGVkdGqkIRf~GeGDegpgg~-GDLyVvIkVK 736 (871)
T TIGR03835 658 NLVYEEEVPQILFFNNQIKEIKYTRHTVDGNTESTTNEAITLEIQLPITSQLNISAIFKGFGHDFGNGC-GDLKVVFKVI 736 (871)
T ss_pred ceEEecccCHHHHhCCCeEEEEEEEeeccCCCcceeeeeEEEEEecCCCCCCCCEEEeccccCCCCCCC-CCEEEEEEEc
Confidence 57889999999999999999999999988776 456677899999999999999999999999876654 9999999999
Q ss_pred CCcceeecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCCCCCCcEEEEcCCCcCCCCCCCCCCCEEEEEEEE-
Q 022539 195 PHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIM- 273 (295)
Q Consensus 195 ~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GDL~v~~~v~- 273 (295)
||+.|+|+|+||++++.|+|.+||+|+++.|+|+||+ ++|+||+++++|+++||+|+|||..+ +.||||||+|+|.
T Consensus 737 PHp~FrRdGdDL~~~v~ISL~EALLGgtIeIpTLDGr-VkLkIPpgTqpGqvLRIkGKGMP~~~--~~RGDLyV~f~V~~ 813 (871)
T TIGR03835 737 PSNFFQIKNDGLHVAALVDPLVAYNGGIIDVFGPNKL-FNVRIPGGIKVNDQVIFKDLGLTKTK--YDKGSLIVHLYYSS 813 (871)
T ss_pred CCCCeEEECCeEEEEEecCHHHHhcCCEEEeeCCCCC-EEEeeCCCCCCCcEEEECCCCCCCCC--CCCCCEEEEEEEee
Confidence 9999999999999999999999999999999999997 99999999999999999999999543 5689999999997
Q ss_pred CCC
Q 022539 274 FPS 276 (295)
Q Consensus 274 ~P~ 276 (295)
+++
T Consensus 814 ~~k 816 (871)
T TIGR03835 814 VMK 816 (871)
T ss_pred ccc
Confidence 454
No 35
>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.96 E-value=2.2e-29 Score=228.07 Aligned_cols=188 Identities=30% Similarity=0.491 Sum_probs=144.9
Q ss_pred CccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCccCCCCCC
Q 022539 4 DYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASDFGTPS 83 (295)
Q Consensus 4 d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~g~~~ 83 (295)
|||+||||+++|+..|||+||++||++||||.|.++ +|.++|++|.+|||+|+|+++|+.||++|..+.. .+++..
T Consensus 44 d~Y~vLgv~~~At~~EIK~Af~~LaKkyHPD~n~~~--~a~~kF~eI~~AYEiLsd~eKR~~YD~~~~~~~~--~~~g~~ 119 (288)
T KOG0715|consen 44 DYYKVLGVSRNATLSEIKSAFRKLAKKYHPDVNKDK--EASKKFKEISEAYEILSDEEKRQEYDVYGLEQHG--EFGGNP 119 (288)
T ss_pred chhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCCc--chhhHHHHHHHHHHHhcCHHHHHHHHHhhhhccc--cccCCc
Confidence 899999999999999999999999999999999874 7899999999999999999999999999987611 111100
Q ss_pred CCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCeeeecccCHHHHhcCceeEEEEeEEeeC-------------------
Q 022539 84 YHHPHDTKPCATRNNNNNNHRAGGAGPKPTPTPIETQLLCTLEELYKGARKKMKISRVLPD------------------- 144 (295)
Q Consensus 84 ~~~~~~~~~f~~~~~~~~~f~~~~~~~~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~------------------- 144 (295)
+ +.|.. .|++. ......+.+.++.+.++|++|..|+.+.+.+.....|
T Consensus 120 -~-----~~~~~------~~~~~-~~~~~~~~~~~~d~~~~f~~A~~g~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~ 186 (288)
T KOG0715|consen 120 -F-----DVFLE------FFGGK-MNKRVPDKDQYYDLSLDFKEAVRGSKKRISFNVLSDCETCFGSGAEEGAKRESCKT 186 (288)
T ss_pred -c-----chHHH------hhccc-ccccccCcccccccccCHHHHhhccccceEEEeecccccccCcCcccccccccchh
Confidence 0 11110 01110 0112234566777888888888888777766543221
Q ss_pred --------------------------------------CCCcEEEEEEEEEEEeCCCCcCCCeEecCCCCCCCCCCCCcc
Q 022539 145 --------------------------------------HFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQEPGLPPAD 186 (295)
Q Consensus 145 --------------------------------------g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GD 186 (295)
|.| .+...+.+.|.+|+|+.++.+|++.+.|.. |
T Consensus 187 ~~~~~~~~~~~~~~f~~~~~~~c~~~~~~~~~~c~~~~g~~-~v~~~k~i~i~~~~g~~~~~~l~~~~~~~~-------~ 258 (288)
T KOG0715|consen 187 CSGRGLVSNPKEDPFILYTCSYCLGRGLVLRDNCQACSGAG-QVRRAKDIMIVLPAGVRSADTLRFAGHGND-------D 258 (288)
T ss_pred hhCcccccccccCCcceeecccccccceeccchHHHhhcch-hhhhheeEEeecCcccccccEEEEecCCcc-------e
Confidence 111 345567899999999999999999998764 9
Q ss_pred EEEEEEEeCCcceeecCCceEEEEEecHHH
Q 022539 187 LIFVVEEKPHAVFQRDGNDLVVNHKISLLE 216 (295)
Q Consensus 187 liv~i~v~~h~~f~r~g~DL~~~~~I~l~~ 216 (295)
|.+++.|.+++.|+|+|.|+++++.|++.+
T Consensus 259 l~v~~~v~~~~~~~r~~~~i~~~~~i~~~~ 288 (288)
T KOG0715|consen 259 LFVRLIVAKSPSFRREGKDILYDAIISFTQ 288 (288)
T ss_pred EEEEEEeccCcccccccCcccccccccccC
Confidence 999999999999999999999999998753
No 36
>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.95 E-value=1.5e-26 Score=209.83 Aligned_cols=256 Identities=51% Similarity=0.866 Sum_probs=200.4
Q ss_pred CCCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCccCC-
Q 022539 1 MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASDF- 79 (295)
Q Consensus 1 m~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~- 79 (295)
|+.|||++|+|.++|+.++|++|||++|++||||+|+.+...+.++|++|.+||++|+|+.+|..||+||++++.+...
T Consensus 1 ~~~d~~~~l~i~~~as~~~i~ka~~~~a~~~hpdk~~~~~~~~~~~~~~~~ea~~~ls~~~kr~~~d~~~~~~~~~~~~~ 80 (306)
T KOG0714|consen 1 MGKDYYKILGIARSASEEDIKKAYRKLALKYHPDKNPSPKEVAEAKFKEIAEAYEVLSDPKKRKIYDQYGEEGLKGGGSF 80 (306)
T ss_pred CcccHHHHhCccccccHHHHHHHHHHHHHhhCCCCCCCchhhHHHHHhhhhccccccCCHHHhhhccccCccccccCCCC
Confidence 7899999999999999999999999999999999998753356668999999999999999999999999977664211
Q ss_pred C---CCC--CCCCCC-----------CCccccC------------CCCCCCCC------CC-C---------CCCCCCCC
Q 022539 80 G---TPS--YHHPHD-----------TKPCATR------------NNNNNNHR------AG-G---------AGPKPTPT 115 (295)
Q Consensus 80 g---~~~--~~~~~~-----------~~~f~~~------------~~~~~~f~------~~-~---------~~~~~~~~ 115 (295)
. ..+ ++.... .++|... ...+..++ .+ . ........
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (306)
T KOG0714|consen 81 SSSFTSELFYFLFRKPDKDFYEFFGVSSPFSGSKKGYRDKNAAPGEEAFKSEGKAFQSLYGPKRKQYDSSGSDRSARQSP 160 (306)
T ss_pred CCCCCCCcceeccCchhhhHHHHhCCCCCCccccccCCccccccCccccccccccccccCCCcccccccccccccccCCC
Confidence 1 011 000000 0111100 00000000 00 0 01112233
Q ss_pred CeeeecccCHHHHhcCceeEEEEeEEeeCCCCcE-EEEEEEEEEEeCCCCcCCCeEecCCCCCCCCCCCCccEEEEEEEe
Q 022539 116 PIETQLLCTLEELYKGARKKMKISRVLPDHFGKP-ITVQEILKIDIKPGWKKGTKITFPEKGNQEPGLPPADLIFVVEEK 194 (295)
Q Consensus 116 di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~-~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDliv~i~v~ 194 (295)
.+...+.+++++.+.|+.+...+.+......+.. ........+.+.++++.|+.+....+|+..++..|-++++.+..+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~f~~~~~ 240 (306)
T KOG0714|consen 161 PVEHPLRVSLEDLYKGESKKMKISRQSFTSNGREGSSRSRYLSISIKPGWKEGTKITFPEEGDEEPGILPADIEFVVDEK 240 (306)
T ss_pred CccCCcceeHHHhccccceeeecccccccCCcccccCccceeEEeccCCcccccceeccccccccCCcCcceeEEEEecC
Confidence 3666677799999999999999998877655543 455678899999999999999999999988888899999999999
Q ss_pred CCcceeecCCceEEE--EEecHHHHhcCCEEEEeccCCcEEEEeeC-CCCCCCcEEEEcCCCcCC
Q 022539 195 PHAVFQRDGNDLVVN--HKISLLEALTGLSLNLTALDGRNLTLPVT-DIIQPGSEVVIPNEGMPI 256 (295)
Q Consensus 195 ~h~~f~r~g~DL~~~--~~I~l~~Al~G~~~~i~~l~g~~i~v~i~-~~~~~g~~~rl~g~G~p~ 256 (295)
+|+.|.+.+.||... ..|++.+|++|....++++++..+.+.+. ..+.++...+++++|+|.
T Consensus 241 ~~~~~~~~~~~l~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (306)
T KOG0714|consen 241 PHPLFSRDGNDLSYSSGYEISLKEALLGVTVFVPTLDGRSYSLSINKDLIEPGEEDVIPGEGLPC 305 (306)
T ss_pred CcccccCCCccceecccceeehhhhhcCcceeeecccCccccCcccccccCCCceeeecCCCCCC
Confidence 999999999999999 99999999999999999999988888887 788999999999999985
No 37
>PF01556 CTDII: DnaJ C terminal domain; InterPro: IPR002939 Molecular chaperones are a diverse family of proteins that function to protect proteins in the intracellular milieu from irreversible aggregation during synthesis and in times of cellular stress. The bacterial molecular chaperone DnaK is an enzyme that couples cycles of ATP binding, hydrolysis, and ADP release by an N-terminal ATP-hydrolizing domain to cycles of sequestration and release of unfolded proteins by a C-terminal substrate binding domain. Dimeric GrpE is the co-chaperone for DnaK, and acts as a nucleotide exchange factor, stimulating the rate of ADP release 5000-fold []. DnaK is itself a weak ATPase; ATP hydrolysis by DnaK is stimulated by its interaction with another co-chaperone, DnaJ. Thus the co-chaperones DnaJ and GrpE are capable of tightly regulating the nucleotide-bound and substrate-bound state of DnaK in ways that are necessary for the normal housekeeping functions and stress-related functions of the DnaK molecular chaperone cycle. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. Thus, DnaK and DnaJ may bind to one and the same polypeptide chain to form a ternary complex. The formation of a ternary complex may result in cis-interaction of the J-domain of DnaJ with the ATPase domain of DnaK. An unfolded polypeptide may enter the chaperone cycle by associating first either with ATP-liganded DnaK or with DnaJ. DnaK interacts with both the backbone and side chains of a peptide substrate; it thus shows binding polarity and admits only L-peptide segments. In contrast, DnaJ has been shown to bind both L- and D-peptides and is assumed to interact only with the side chains of the substrate. This domain consists of the C-terminal region of the DnaJ protein. The function of this domain is unknown. It is found associated with IPR001623 from INTERPRO and IPR001305 from INTERPRO. ; GO: 0051082 unfolded protein binding, 0006457 protein folding; PDB: 2Q2G_A 2QLD_A 3AGX_A 3AGZ_A 3AGY_A 3I38_J 3LZ8_B 2B26_B 1C3G_A 1XAO_B ....
Probab=99.89 E-value=2.6e-23 Score=154.29 Aligned_cols=81 Identities=40% Similarity=0.680 Sum_probs=70.6
Q ss_pred ceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCCCCCCcEEEEcCCCcCCCCCCCCCCCEEEEEEEECCCCCCHHHHH
Q 022539 205 DLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMFPSRLTAEQKS 284 (295)
Q Consensus 205 DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~ 284 (295)
||+++++||+++|++|++++|+|++|++++|++|+++++|++++|+|+|||...+++.+|||||+|+|.+|++||++|++
T Consensus 1 DL~~~~~I~l~~al~G~~i~i~~l~g~~~~i~ip~~~~~g~~~~i~g~G~p~~~~~~~~GdL~v~~~V~~P~~ls~~qk~ 80 (81)
T PF01556_consen 1 DLYCTIPISLKEALLGGTISIPTLDGKTIKIKIPPGTQPGQQLRIKGKGMPKPKGGGKRGDLIVKFEVEFPKKLSPEQKE 80 (81)
T ss_dssp EEEEEEEEEHHHHHH-EEEEEE-TTS-EEEEEETST-STT-EEEETTESEEESSSTTSBEEEEEEEEEE--SSTSHHHHH
T ss_pred CeEEEEEeCHHHHhCCCEEEEECCCCCEEEEeccCccCCCcEEeecCCCCCcCCCCCCcCCEEEEEEEECCCCCCHHHhc
Confidence 89999999999999999999999999889999999999999999999999988765689999999999999999999998
Q ss_pred H
Q 022539 285 D 285 (295)
Q Consensus 285 ~ 285 (295)
+
T Consensus 81 l 81 (81)
T PF01556_consen 81 L 81 (81)
T ss_dssp H
T ss_pred C
Confidence 5
No 38
>KOG0716 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.82 E-value=4.6e-21 Score=167.43 Aligned_cols=72 Identities=51% Similarity=0.926 Sum_probs=68.6
Q ss_pred CCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCC
Q 022539 3 VDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLK 75 (295)
Q Consensus 3 ~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~ 75 (295)
.|+|+||||+++|+.++||||||+||++||||+++++ +++.++|++||+||++|+||.+|..||.||+.++.
T Consensus 31 ~~LYdVLgl~k~at~d~IKKaYR~L~~k~HPD~~gd~-P~~~dkf~eIN~Ay~ILsD~~kR~~YD~~g~~~l~ 102 (279)
T KOG0716|consen 31 LDLYDVLGLPKTATKDEIKKAYRKLALKYHPDKNGDN-PEATDKFKEINTAYAILSDPTKRNVYDEYGELGLK 102 (279)
T ss_pred hHHHHHhCCCcccchHHHHHHHHHHHHHhCCCcCCCC-chhHHHHHHHHHHHHHhcChhhhhhHHHhhhHHHH
Confidence 5899999999999999999999999999999999986 68899999999999999999999999999988765
No 39
>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=99.81 E-value=4.2e-19 Score=154.14 Aligned_cols=193 Identities=28% Similarity=0.404 Sum_probs=135.4
Q ss_pred CCCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCC-CCCCCccCC
Q 022539 1 MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYG-PEGLKASDF 79 (295)
Q Consensus 1 m~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g-~~~~~~~~~ 79 (295)
|..|||+||||+++|+..||++|||++|++||||+++.+...+.+.|+.|++||++|+|+.+|+.||+++ .........
T Consensus 4 ~~~~~y~iLgv~~~as~~eik~ayrkla~~~HPD~~~~~~~~a~~~f~~i~~Ay~vLsd~~~r~~yd~~~~~~~~~~~~~ 83 (237)
T COG2214 4 DLLDYYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGDPKVAEEKFKEINEAYEILSDPERRAEYDKIGADNYFPGKSY 83 (237)
T ss_pred hhhhHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhhCHHHHHHhhhhcccccCccccc
Confidence 4579999999999999999999999999999999998753248899999999999999999999999973 322221110
Q ss_pred CCCCCCCCCC---C-----CccccC------C--CCC--CCCCC----------CCC-CCCCCCC-CeeeecccCHHHHh
Q 022539 80 GTPSYHHPHD---T-----KPCATR------N--NNN--NNHRA----------GGA-GPKPTPT-PIETQLLCTLEELY 129 (295)
Q Consensus 80 g~~~~~~~~~---~-----~~f~~~------~--~~~--~~f~~----------~~~-~~~~~~~-di~~~l~itl~e~~ 129 (295)
.....+.... . ..+... . ... ..+.. ... ....... +....+.+++.+++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (237)
T COG2214 84 RESAAFPIEGSLQLTGLYEEWRGKRNKTERKASLADLLSRGLSGLAAALSLFADEAALRSGSLRRRDLAANLADNFEEAL 163 (237)
T ss_pred cccccccccccccHHHHHHhhcccccccccccchhhhcccccccccccccccccccccccccccccceeeeeeccHHHHh
Confidence 0000010000 0 000000 0 000 00000 000 0011111 57778889999999
Q ss_pred cCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCCCcCCCeEecCCCCCCCCCCCCccEEEEEEEeCCcceeecCCce
Q 022539 130 KGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQEPGLPPADLIFVVEEKPHAVFQRDGNDL 206 (295)
Q Consensus 130 ~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDliv~i~v~~h~~f~r~g~DL 206 (295)
.+....+.... . ....+.+|.|+..+..+++.+.+.... ...++.+..+..++|+.|...++++
T Consensus 164 ~~~~~~~~~~~------~------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (237)
T COG2214 164 AGVKKAVARLL------G------KALKSTIKAGALEGKALRLKGLLKSAR-GALGKARLKELSKRHPPFALEGDDK 227 (237)
T ss_pred cCcceeeeccc------c------ccccccCCcccccCceeeecccCCcCC-CCcccceeeeeccCCCCccccCCcc
Confidence 99887776642 1 233489999999999999999988777 7789999999999999999999998
No 40
>KOG0717 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.80 E-value=1.8e-20 Score=173.72 Aligned_cols=75 Identities=44% Similarity=0.790 Sum_probs=70.4
Q ss_pred CCCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCC
Q 022539 1 MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLK 75 (295)
Q Consensus 1 m~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~ 75 (295)
|++.||+||||.++|+..|||++||+||++||||+||+.-++|.++|+.|+.||+|||||..|+.||.+.++-+.
T Consensus 6 ~~~c~YE~L~v~~~a~d~eik~~YRklALq~HPDknpd~ieeat~~F~~i~aAYeVLSdp~eR~wyd~hreqil~ 80 (508)
T KOG0717|consen 6 KKRCYYEVLGVERDADDDEIKKNYRKLALQYHPDKNPDRIEEATQQFQLIQAAYEVLSDPQERAWYDSHREQILR 80 (508)
T ss_pred hhhHHHHHhcccccCCHHHHHHHHHHHHHhhCCCCCCccHHHHHHHHHHHHHHHHHhcChHhhhhHHHHHHHHhc
Confidence 578999999999999999999999999999999999988889999999999999999999999999997775554
No 41
>KOG0718 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.80 E-value=2.7e-20 Score=172.62 Aligned_cols=73 Identities=48% Similarity=0.917 Sum_probs=68.6
Q ss_pred CCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCC--cHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCC
Q 022539 3 VDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPAT--NQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLK 75 (295)
Q Consensus 3 ~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~--~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~ 75 (295)
.|||.+|+|+++||.+||++|||++++-||||+..++ ++.|++.|+.|.+||||||||.+|++||.||++|++
T Consensus 9 ~e~Ya~LNlpkdAt~eeI~~AYrr~~~lfHPDkh~dpd~K~~AE~~F~~i~~AyEVLsDp~kRaIYD~~G~qGL~ 83 (546)
T KOG0718|consen 9 IELYALLNLPKDATDEEIKKAYRRLSRLFHPDKHTDPDQKKAAEEKFQRIQRAYEVLSDPQKRAIYDNYGEQGLK 83 (546)
T ss_pred hhHHHHhCCCcccCHHHHHHHHHHHHHhcCCcccCChhHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhhcccc
Confidence 5899999999999999999999999999999997543 456999999999999999999999999999999998
No 42
>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional
Probab=99.77 E-value=3.3e-19 Score=178.41 Aligned_cols=75 Identities=32% Similarity=0.600 Sum_probs=69.5
Q ss_pred CCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCccC
Q 022539 2 GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASD 78 (295)
Q Consensus 2 ~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~ 78 (295)
.++||+||||+++||..+||+|||+||++||||+|+.+ .|.++|+.|++||+|||||.+|+.||+||..|+...+
T Consensus 572 d~dYYdILGVs~dAS~~EIKKAYRKLAlkyHPDKN~~~--~A~ekFq~I~EAYeVLSDp~kRk~YD~~G~~Gl~~~~ 646 (1136)
T PTZ00341 572 DTLFYDILGVGVNADMKEISERYFKLAENYYPPKRSGN--EGFHKFKKINEAYQILGDIDKKKMYNKFGYDGIKGVN 646 (1136)
T ss_pred CCChHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc--hHHHHHHHHHHHHHHhCCHHHHHHHhhccccccCCCC
Confidence 46999999999999999999999999999999999864 5788999999999999999999999999998877543
No 43
>KOG0691 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.76 E-value=2.4e-19 Score=161.63 Aligned_cols=74 Identities=46% Similarity=0.806 Sum_probs=69.0
Q ss_pred CCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCc
Q 022539 2 GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKA 76 (295)
Q Consensus 2 ~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~ 76 (295)
..|||+||||+.+|+..||++|||+.|++||||+||++ +.|.++|+.+.+||+||+|+.+|+.||++|..+...
T Consensus 4 ~~dyY~lLgi~~~at~~eIkKaYr~kaL~~HPDKNp~d-P~A~ekFq~L~eAy~VL~D~~~R~~YDk~~k~~~~~ 77 (296)
T KOG0691|consen 4 DTDYYDLLGISEDATDAEIKKAYRKKALQYHPDKNPGD-PQAAEKFQELSEAYEVLSDEESRAAYDKLRKSGSSA 77 (296)
T ss_pred cchHHHHhCCCCCCCHHHHHHHHHHHHHhcCCCCCCCC-hHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhhcccc
Confidence 46999999999999999999999999999999999987 459999999999999999999999999999876543
No 44
>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []. Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Such a structure is shown in the following schematic representation: +------------+-+-------+-----+-----------+--------------------------------+ | N-terminal | | Gly-R | | CXXCXGXG | C-terminal | +------------+-+-------+-----+-----------+--------------------------------+ It is thought that the 'J' domain of DnaJ mediates the interaction with the dnaK protein and consists of four helices, the second of which has a charged surface that includes at least one pair of basic residues that are essential for interaction with the ATPase domain of Hsp70. The J- and CRR-domains are found in many prokaryotic and eukaryotic proteins [], either together or separately. In yeast, J-domains have been classified into 3 groups; the class III proteins are functionally distinct and do not appear to act as molecular chaperones []. ; GO: 0031072 heat shock protein binding; PDB: 2GUZ_C 2L6L_A 1HDJ_A 2EJ7_A 1FPO_C 2CUG_A 2QSA_A 2OCH_A 3BVO_B 3APQ_A ....
Probab=99.75 E-value=4e-19 Score=125.75 Aligned_cols=64 Identities=45% Similarity=0.872 Sum_probs=59.9
Q ss_pred CccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCcccccccc
Q 022539 4 DYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYD 67 (295)
Q Consensus 4 d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd 67 (295)
|||+||||+++|+.++||+||+++++++|||+++.+...+.+.|..|++||++|+||.+|+.||
T Consensus 1 ~~y~iLgl~~~~~~~eik~~y~~l~~~~HPD~~~~~~~~~~~~~~~i~~Ay~~L~~~~~R~~YD 64 (64)
T PF00226_consen 1 NPYEILGLPPDASDEEIKKAYRRLSKQYHPDKNSGDEAEAEEKFARINEAYEILSDPERRRRYD 64 (64)
T ss_dssp HHHHHCTSTTTSSHHHHHHHHHHHHHHTSTTTGTSTHHHHHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred ChHHHCCCCCCCCHHHHHHHHHhhhhccccccchhhhhhhhHHHHHHHHHHHHhCCHHHHHhcC
Confidence 6899999999999999999999999999999987653468899999999999999999999998
No 45
>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms]
Probab=99.73 E-value=5.4e-18 Score=153.04 Aligned_cols=73 Identities=45% Similarity=0.779 Sum_probs=65.8
Q ss_pred CCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCC--cHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCC
Q 022539 2 GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPAT--NQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLK 75 (295)
Q Consensus 2 ~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~--~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~ 75 (295)
.+|||+||||.++|+..||.||||++|.+||||...+. +..|+++|-.|..|-|||+||++|+.||. |++.+.
T Consensus 393 kRDYYKILGVkRnAsKqEI~KAYRKlAqkWHPDNFqdEeEKKkAEKKFIDIAAAKEVLsd~EkRrqFDn-GeDPLD 467 (504)
T KOG0624|consen 393 KRDYYKILGVKRNASKQEITKAYRKLAQKWHPDNFQDEEEKKKAEKKFIDIAAAKEVLSDPEKRRQFDN-GEDPLD 467 (504)
T ss_pred cchHHHHhhhcccccHHHHHHHHHHHHHhcCCccccCHHHHHHHHHhhhhHHHHHHhhcCHHHHhhccC-CCCCCC
Confidence 37999999999999999999999999999999998653 23589999999999999999999999998 666655
No 46
>KOG0719 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.72 E-value=2.9e-18 Score=146.55 Aligned_cols=73 Identities=40% Similarity=0.710 Sum_probs=66.3
Q ss_pred CCCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCC-CcHHHHHHHHHHHHHhhhcCCccccccccCCCCCC
Q 022539 1 MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPA-TNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEG 73 (295)
Q Consensus 1 m~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~-~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~ 73 (295)
|-+|+|+||||.++|+..+|++|||+||++||||+++. +..+|.++|+.++.||.||+|.++|+.||+.|.-.
T Consensus 12 ~~~d~YevLGVer~a~~~eIrkAY~klal~~HPDk~~eed~~ea~~kFq~l~k~y~iLsDeekR~~YDetG~id 85 (264)
T KOG0719|consen 12 NKKDLYEVLGVERDATDKEIRKAYHKLALRLHPDKNHEEDKVEATEKFQQLQKAYQILSDEEKRAVYDETGSID 85 (264)
T ss_pred cccCHHHHhhhcccCCHHHHHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHhccCCCC
Confidence 34699999999999999999999999999999999963 23579999999999999999999999999988643
No 47
>smart00271 DnaJ DnaJ molecular chaperone homology domain.
Probab=99.69 E-value=4.4e-17 Score=113.64 Aligned_cols=60 Identities=60% Similarity=1.034 Sum_probs=54.7
Q ss_pred CCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccc
Q 022539 3 VDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRK 62 (295)
Q Consensus 3 ~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~ 62 (295)
+|||+||||+++++.++||+||+++++++|||+++...+.+.+.|.+|++||++|+||.+
T Consensus 1 ~~~y~vLgl~~~~~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~~~~~l~~Ay~~L~~~~~ 60 (60)
T smart00271 1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK 60 (60)
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHHHcCCCC
Confidence 489999999999999999999999999999999975335788999999999999999853
No 48
>KOG0721 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.66 E-value=5.8e-17 Score=137.49 Aligned_cols=69 Identities=41% Similarity=0.798 Sum_probs=64.4
Q ss_pred CCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCC
Q 022539 3 VDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPE 72 (295)
Q Consensus 3 ~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~ 72 (295)
.|+|+||||++.||.+|||+|||+|+++||||++|.. .+.++.|..|++||+.|+|+..|..|..||+.
T Consensus 99 fDPyEILGl~pgas~~eIKkaYR~LSik~HPDK~~~~-~~~e~~~~~I~KAY~aLTD~~sreN~ekYG~P 167 (230)
T KOG0721|consen 99 FDPYEILGLDPGASEKEIKKAYRRLSIKYHPDKQPPE-EGDEEFFEAIAKAYQALTDKKSRENWEKYGNP 167 (230)
T ss_pred CCcHHhhCCCCCCCHHHHHHHHHHhhhhhCCCcCCCc-chhHHHHHHHHHHHHHhcchhhHHHHHHhCCC
Confidence 5999999999999999999999999999999999764 45788899999999999999999999999974
No 49
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ. This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.
Probab=99.66 E-value=7.8e-17 Score=158.32 Aligned_cols=71 Identities=48% Similarity=0.870 Sum_probs=66.2
Q ss_pred CCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCC
Q 022539 3 VDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLK 75 (295)
Q Consensus 3 ~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~ 75 (295)
+|||+||||+++|+.++||+|||+||++||||+++. ..+.++|++|++||++|+||.+|+.||.||..+..
T Consensus 2 ~DYYeVLGVs~dAS~eEIKKAYRKLAKKyHPDKn~~--~eAeekFqeINEAYEVLSDP~KRa~YD~fG~aG~d 72 (871)
T TIGR03835 2 RDYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKA--PDAASIFAEINEANDVLSNPKKRANYDKYGHDGVD 72 (871)
T ss_pred CChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--hhHHHHHHHHHHHHHHhCCHHHHHHHhhhcccccc
Confidence 699999999999999999999999999999999976 46788999999999999999999999999986653
No 50
>PHA03102 Small T antigen; Reviewed
Probab=99.66 E-value=6.5e-17 Score=132.70 Aligned_cols=68 Identities=22% Similarity=0.307 Sum_probs=62.5
Q ss_pred CCccceecCCCCC--CHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCC
Q 022539 3 VDYYNILKVSRGA--TEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLK 75 (295)
Q Consensus 3 ~d~Y~iLgv~~~a--~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~ 75 (295)
+.+|+||||+++| |.++||+|||++|+++|||++++ .++|++|++||++|+|+.+|..||.+|.+...
T Consensus 5 ~~l~~vLGl~~~A~~s~~eIKkAYr~la~~~HPDkgg~-----~e~~k~in~Ay~~L~d~~~r~~yd~~g~~~~~ 74 (153)
T PHA03102 5 KELMDLLGLPRSAWGNLPLMRKAYLRKCLEFHPDKGGD-----EEKMKELNTLYKKFRESVKSLRDLDGEEDSSS 74 (153)
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCch-----hHHHHHHHHHHHHHhhHHHhccccccCCcccc
Confidence 3579999999999 99999999999999999999864 47999999999999999999999999987654
No 51
>cd06257 DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.
Probab=99.66 E-value=2.1e-16 Score=108.19 Aligned_cols=55 Identities=58% Similarity=1.034 Sum_probs=51.5
Q ss_pred CccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCC
Q 022539 4 DYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSD 59 (295)
Q Consensus 4 d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d 59 (295)
|||++|||+++++.++||++||+|++++|||+++.. +.+.+.|..|++||++|+|
T Consensus 1 ~~y~vLgl~~~~~~~~ik~~y~~l~~~~HPD~~~~~-~~~~~~~~~l~~Ay~~L~d 55 (55)
T cd06257 1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDD-PEAEEKFKEINEAYEVLSD 55 (55)
T ss_pred ChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc-HHHHHHHHHHHHHHHHhcC
Confidence 799999999999999999999999999999999753 4688999999999999986
No 52
>PRK01356 hscB co-chaperone HscB; Provisional
Probab=99.54 E-value=5.3e-15 Score=123.92 Aligned_cols=67 Identities=28% Similarity=0.431 Sum_probs=58.2
Q ss_pred CCCccceecCCCC--CCHHHHHHHHHHHHHHhCCCCCCCCc--HHHHHHHHHHHHHhhhcCCccccccccC
Q 022539 2 GVDYYNILKVSRG--ATEDDLKKSYKRLAMKWHPDKNPATN--QQAEAKFKLISEAYDVLSDPRKRQIYDL 68 (295)
Q Consensus 2 ~~d~Y~iLgv~~~--a~~~eIk~ayr~la~~~hPd~~~~~~--~~~~~~f~~i~~Ay~~L~d~~~r~~yd~ 68 (295)
+.|||++|||++. ++..+|+++||+|++++|||++.... ..+.+.|..||+||++|+||.+|+.|+.
T Consensus 1 ~~~yf~llgl~~~f~id~~~L~~aYr~lq~~~HPDk~~~~~~k~~~~~~s~~in~AY~~L~dp~~Ra~YlL 71 (166)
T PRK01356 1 MQNYFQLLGLPQEYNIDLKILEKQYFAMQVKYHPDKAKTLQEKEQNLIIASELNNAYSTLKDALKRAEYML 71 (166)
T ss_pred CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 4799999999996 78999999999999999999986421 2244568999999999999999999985
No 53
>PRK05014 hscB co-chaperone HscB; Provisional
Probab=99.54 E-value=7.6e-15 Score=123.69 Aligned_cols=66 Identities=29% Similarity=0.504 Sum_probs=58.1
Q ss_pred CCccceecCCCC--CCHHHHHHHHHHHHHHhCCCCCCCCcH----HHHHHHHHHHHHhhhcCCccccccccC
Q 022539 3 VDYYNILKVSRG--ATEDDLKKSYKRLAMKWHPDKNPATNQ----QAEAKFKLISEAYDVLSDPRKRQIYDL 68 (295)
Q Consensus 3 ~d~Y~iLgv~~~--a~~~eIk~ayr~la~~~hPd~~~~~~~----~~~~~f~~i~~Ay~~L~d~~~r~~yd~ 68 (295)
+|||++|||++. ++..+|+++||++++++|||+.+...+ .+.+.|..||+||++|+||.+|+.|+.
T Consensus 1 ~~yf~llgl~~~~~~d~~~L~~~yr~l~~~~HPDk~~~~~~~~~~~a~~~s~~iN~AY~~L~dp~~Ra~Yll 72 (171)
T PRK05014 1 MDYFTLFGLPARYDIDTQLLASRYQELQRQFHPDKFANASERERLLAVQQAATINDAYQTLKHPLKRAEYLL 72 (171)
T ss_pred CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHCChhHHHHHHH
Confidence 399999999995 788999999999999999999764322 367799999999999999999999984
No 54
>PRK03578 hscB co-chaperone HscB; Provisional
Probab=99.46 E-value=6.4e-14 Score=118.44 Aligned_cols=67 Identities=28% Similarity=0.404 Sum_probs=57.8
Q ss_pred CCCccceecCCCC--CCHHHHHHHHHHHHHHhCCCCCCCCcH----HHHHHHHHHHHHhhhcCCccccccccC
Q 022539 2 GVDYYNILKVSRG--ATEDDLKKSYKRLAMKWHPDKNPATNQ----QAEAKFKLISEAYDVLSDPRKRQIYDL 68 (295)
Q Consensus 2 ~~d~Y~iLgv~~~--a~~~eIk~ayr~la~~~hPd~~~~~~~----~~~~~f~~i~~Ay~~L~d~~~r~~yd~ 68 (295)
..|||++|||++. ++..+|+++||+|++++|||+++.... .+.+.+..||+||++|+||.+|+.|+.
T Consensus 5 ~~dyf~llglp~~f~~d~~~L~~~yr~lq~~~HPD~~~~~~~~e~~~a~~~s~~iN~AY~tL~~p~~Ra~Yll 77 (176)
T PRK03578 5 KDDHFSLFGLPARFALDEAALDAAYRTVQAQVHPDRFAAAGDAEKRVAMQWATRANEAYQTLRDPLKRARYLL 77 (176)
T ss_pred CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCChhhHHHHHH
Confidence 4699999999995 688999999999999999999864321 245567999999999999999999994
No 55
>KOG0722 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.46 E-value=1.8e-14 Score=124.80 Aligned_cols=65 Identities=34% Similarity=0.654 Sum_probs=60.9
Q ss_pred CCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCC
Q 022539 3 VDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLY 69 (295)
Q Consensus 3 ~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~ 69 (295)
.|.|+||||+++|+.+||.+|||+||++||||++++ +++.+.|+.|..||++|.|...|..||-+
T Consensus 33 enCYdVLgV~Rea~KseIakAYRqLARrhHPDr~r~--~e~k~~F~~iAtayeilkd~e~rt~ydya 97 (329)
T KOG0722|consen 33 ENCYDVLGVAREANKSEIAKAYRQLARRHHPDRNRD--PESKKLFVKIATAYEILKDNETRTQYDYA 97 (329)
T ss_pred hhHHHHhhhhhhccHHHHHHHHHHHHHHhCCcccCC--chhhhhhhhhhcccccccchhhHHhHHHH
Confidence 589999999999999999999999999999999986 46779999999999999999999999964
No 56
>PRK00294 hscB co-chaperone HscB; Provisional
Probab=99.45 E-value=9.6e-14 Score=116.90 Aligned_cols=67 Identities=25% Similarity=0.396 Sum_probs=59.3
Q ss_pred CCCccceecCCCC--CCHHHHHHHHHHHHHHhCCCCCCCCc----HHHHHHHHHHHHHhhhcCCccccccccC
Q 022539 2 GVDYYNILKVSRG--ATEDDLKKSYKRLAMKWHPDKNPATN----QQAEAKFKLISEAYDVLSDPRKRQIYDL 68 (295)
Q Consensus 2 ~~d~Y~iLgv~~~--a~~~eIk~ayr~la~~~hPd~~~~~~----~~~~~~f~~i~~Ay~~L~d~~~r~~yd~ 68 (295)
..|||++|||++. .+..+|+++||+|++++|||++.... ..+.+.|..||+||++|+||.+|+.|+.
T Consensus 3 ~~~~F~l~~l~~~f~id~~~L~~~Yr~Lq~~~HPDk~~~~~~~e~~~a~~~s~~IN~AY~~L~~p~~Ra~YlL 75 (173)
T PRK00294 3 TPCHFALFDLQPSFRLDLDQLATRYRELAREVHPDRFADAPEREQRLALERSASLNEAYQTLKSPPRRARYLL 75 (173)
T ss_pred CCChhhhcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhCChhhhHHHHH
Confidence 5799999999996 67899999999999999999986432 2367789999999999999999999994
No 57
>KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.44 E-value=4.1e-14 Score=130.56 Aligned_cols=66 Identities=52% Similarity=0.891 Sum_probs=63.7
Q ss_pred CCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccC
Q 022539 3 VDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDL 68 (295)
Q Consensus 3 ~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~ 68 (295)
+|||.|||++++|+..|||+|||++|+.||||++..++.+++.+|+++-+||.+|+||.+|..||.
T Consensus 373 kd~ykilGi~~~as~~eikkayrk~AL~~Hpd~~agsq~eaE~kFkevgeAy~il~d~~kr~r~ds 438 (486)
T KOG0550|consen 373 KDWYKILGISRNASDDEIKKAYRKLALVHHPDKNAGSQKEAEAKFKEVGEAYTILSDPMKRVRFDS 438 (486)
T ss_pred hhHHHHhhhhhhcccchhhhHHHHHHHHhCCCcCcchhHHHHHHHHHHHHHHHHhcCHHHHhhccc
Confidence 699999999999999999999999999999999987767899999999999999999999999997
No 58
>PTZ00100 DnaJ chaperone protein; Provisional
Probab=99.38 E-value=4.2e-13 Score=104.73 Aligned_cols=51 Identities=27% Similarity=0.457 Sum_probs=46.5
Q ss_pred CCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcC
Q 022539 3 VDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLS 58 (295)
Q Consensus 3 ~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~ 58 (295)
.++|++|||+++||.+|||++||+|++++|||++.+ .+.|++|++||++|.
T Consensus 65 ~eAy~ILGv~~~As~~eIkkaYRrLa~~~HPDkgGs-----~~~~~kIneAyevL~ 115 (116)
T PTZ00100 65 SEAYKILNISPTASKERIREAHKQLMLRNHPDNGGS-----TYIASKVNEAKDLLL 115 (116)
T ss_pred HHHHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-----HHHHHHHHHHHHHHh
Confidence 489999999999999999999999999999999642 468999999999985
No 59
>KOG0720 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.36 E-value=3.4e-13 Score=125.76 Aligned_cols=66 Identities=41% Similarity=0.631 Sum_probs=62.2
Q ss_pred CCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCC
Q 022539 2 GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLY 69 (295)
Q Consensus 2 ~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~ 69 (295)
..|.|.+|||++++|+++||+.||++|...|||||-. +.|+|.|+.++.|||+|+|+.+|..||.-
T Consensus 234 ~~daYsvlGl~~d~sd~~lKk~Yrk~A~LVhPDKn~~--~~A~Eafk~Lq~Afevig~~~kR~eYd~e 299 (490)
T KOG0720|consen 234 ILDAYSALGLPSDCSDADLKKNYRKKAMLVHPDKNMI--PRAEEAFKKLQVAFEVIGDSVKRKEYDLE 299 (490)
T ss_pred CCCchhhcCCCCCCCHHHHHHHHHhhceEeCCCccCC--hhHHHHHHHHHHHHHHhcchhhhhHHHHH
Confidence 3699999999999999999999999999999999974 57999999999999999999999999973
No 60
>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional
Probab=99.29 E-value=2e-12 Score=116.57 Aligned_cols=57 Identities=32% Similarity=0.563 Sum_probs=50.8
Q ss_pred CCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCC------cHHHHHHHHHHHHHhhhcCC
Q 022539 3 VDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPAT------NQQAEAKFKLISEAYDVLSD 59 (295)
Q Consensus 3 ~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~------~~~~~~~f~~i~~Ay~~L~d 59 (295)
.|+|++|||+++||.+|||+|||+|+++||||++.+. .+.+.++|++|++||++|+.
T Consensus 200 ~~ay~vLgv~~~as~~eIk~aYr~L~~~~HPDk~~~~g~~~~~~~~a~ek~~~I~~AYe~L~~ 262 (267)
T PRK09430 200 EDAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKEKAQEIQAAYELIKK 262 (267)
T ss_pred HhHHHHcCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHH
Confidence 4899999999999999999999999999999996431 14588999999999999975
No 61
>PHA02624 large T antigen; Provisional
Probab=99.28 E-value=2.2e-12 Score=125.81 Aligned_cols=59 Identities=25% Similarity=0.387 Sum_probs=55.4
Q ss_pred CCccceecCCCCC--CHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccc
Q 022539 3 VDYYNILKVSRGA--TEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIY 66 (295)
Q Consensus 3 ~d~Y~iLgv~~~a--~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~y 66 (295)
+++|++|||+++| +.++||+|||++|++||||++.+ .++|++|++||++|+|+.+|..|
T Consensus 11 ~elyelLGL~~~A~gs~~eIKkAYRkLAkkyHPDKgGd-----eekfk~Ln~AYevL~d~~k~~r~ 71 (647)
T PHA02624 11 KELMDLLGLPMAAWGNLPLMRKAYLRKCKEYHPDKGGD-----EEKMKRLNSLYKKLQEGVKSARQ 71 (647)
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCc-----HHHHHHHHHHHHHHhcHHHhhhc
Confidence 4799999999999 99999999999999999999743 57999999999999999999998
No 62
>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]
Probab=99.21 E-value=5.3e-12 Score=117.37 Aligned_cols=70 Identities=41% Similarity=0.764 Sum_probs=64.6
Q ss_pred CCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCC----CcHHHHHHHHHHHHHhhhcCCccccccccCCCCC
Q 022539 3 VDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPA----TNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPE 72 (295)
Q Consensus 3 ~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~----~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~ 72 (295)
-|+|+|||++.+++..+||++||+|+.|+|||+-+. ..++.++.+++|++||+.|+|...|+.|-.||.-
T Consensus 98 fDPyEILGI~~~ts~rdik~~yr~Ls~KfhpdK~~~mvn~~rse~Ee~y~~ItkAY~~lTd~k~renyl~yGtP 171 (610)
T COG5407 98 FDPYEILGIDQDTSERDIKKRYRMLSMKFHPDKAPPMVNELRSEYEEKYKTITKAYGLLTDKKRRENYLNYGTP 171 (610)
T ss_pred CChHHhhcccCCCcHHHHHHHHHhheeecChhhcCCCChhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhcCCC
Confidence 599999999999999999999999999999999764 2467899999999999999999999999999863
No 63
>PRK01773 hscB co-chaperone HscB; Provisional
Probab=99.17 E-value=3.4e-11 Score=101.45 Aligned_cols=67 Identities=19% Similarity=0.253 Sum_probs=58.6
Q ss_pred CCCccceecCCCC--CCHHHHHHHHHHHHHHhCCCCCCCCc----HHHHHHHHHHHHHhhhcCCccccccccC
Q 022539 2 GVDYYNILKVSRG--ATEDDLKKSYKRLAMKWHPDKNPATN----QQAEAKFKLISEAYDVLSDPRKRQIYDL 68 (295)
Q Consensus 2 ~~d~Y~iLgv~~~--a~~~eIk~ayr~la~~~hPd~~~~~~----~~~~~~f~~i~~Ay~~L~d~~~r~~yd~ 68 (295)
++|||++|||++. .+..+++++||+|.+++|||+..... ..+.+....||+||.+|+||.+|+.|=-
T Consensus 1 ~~nyF~lf~lp~~F~iD~~~L~~~y~~Lq~~~HPD~f~~~~~~eq~~a~~~ss~iN~AY~tLkdPl~RA~YLL 73 (173)
T PRK01773 1 MNNPFALFDLPVDFQLDNALLSERYLALQKSLHPDNFANSSAQEQRLAMQKSAEVNDALQILKDPILRAEAII 73 (173)
T ss_pred CCChHHhcCCCCCCCCCHHHHHHHHHHHHHHhCcCcccCCCHHHHHHHHHHHHHHHHHHHHHCChHHHHHHHH
Confidence 4799999999995 89999999999999999999975432 2366678999999999999999999864
No 64
>PRK14299 chaperone protein DnaJ; Provisional
Probab=99.08 E-value=5.2e-10 Score=102.28 Aligned_cols=73 Identities=19% Similarity=0.309 Sum_probs=65.7
Q ss_pred eeecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCCCCCCcEEEEcCCCcCCCCCCCCCCCEEEEEEEECCCCC
Q 022539 199 FQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMFPSRL 278 (295)
Q Consensus 199 f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GDL~v~~~v~~P~~l 278 (295)
+.|+|.|+++++.|||.||++|+++.| +++|++++|+||+++++|++++++|+|++. |||||+|+|.-++.+
T Consensus 125 ~~~~g~dl~~~l~isL~ea~~G~~~~i-~l~g~~~~V~Ip~G~~~G~~ir~~g~G~~~-------GDL~v~i~v~~h~~f 196 (291)
T PRK14299 125 RARKGRDLEAELPLTLEEAYRGGEKVV-EVAGERLSVRIPPGVREGQVIRLAGKGRQG-------GDLYLVVRLLPHPVF 196 (291)
T ss_pred CCCCCCCEEEEEEecHHHHhCCCeEEE-eeCCEEEEEecCCCcCCCcEEEECCCCCCC-------CCEEEEEEEcCCCCe
Confidence 347799999999999999999999998 678888999999999999999999999862 999999999977765
Q ss_pred C
Q 022539 279 T 279 (295)
Q Consensus 279 ~ 279 (295)
.
T Consensus 197 ~ 197 (291)
T PRK14299 197 R 197 (291)
T ss_pred E
Confidence 4
No 65
>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB. This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock.
Probab=99.04 E-value=2.8e-10 Score=94.63 Aligned_cols=55 Identities=29% Similarity=0.438 Sum_probs=47.5
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCC----cHHHHHHHHHHHHHhhhcCCccccccccC
Q 022539 14 GATEDDLKKSYKRLAMKWHPDKNPAT----NQQAEAKFKLISEAYDVLSDPRKRQIYDL 68 (295)
Q Consensus 14 ~a~~~eIk~ayr~la~~~hPd~~~~~----~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~ 68 (295)
+.+..+|+++||+|++++|||+.+.. +..+.+.|..||+||++|+||.+|+.|+.
T Consensus 2 ~iD~~~L~~~yr~lq~~~HPD~~~~~~~~~~~~a~~~s~~iN~AY~~L~~p~~Ra~ylL 60 (157)
T TIGR00714 2 QLDTQALSLRYQDLQRQYHPDKFASGSAQEQLAAVQQSTTLNQAYQTLKDPLMRAEYML 60 (157)
T ss_pred CCCHHHHHHHHHHHHHHHCcCCCCCCChhhhHHHHHHHHHHHHHHHHhCChhhhHHHHH
Confidence 35789999999999999999996532 22377899999999999999999999996
No 66
>PRK14282 chaperone protein DnaJ; Provisional
Probab=99.03 E-value=3.7e-10 Score=106.58 Aligned_cols=85 Identities=16% Similarity=0.155 Sum_probs=74.4
Q ss_pred CCCCCeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCCCcCCCeEecCCCCCCCC-CCCCccEEEE
Q 022539 112 PTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQEP-GLPPADLIFV 190 (295)
Q Consensus 112 ~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDliv~ 190 (295)
+++.|+.+++.|||.||+.|+++.|... +| +.++|.||+|+++|++++++|+|.+.. +..+|||+|+
T Consensus 273 r~G~DL~~~~~Isl~eAl~G~~~~i~~l------dG------~~i~v~Ip~g~~~g~~iri~GkG~p~~~~~~~GDL~V~ 340 (369)
T PRK14282 273 RSGSDLIYDVTIDYLQAILGTTVEVPLP------EG------GTTMLKIPPGTQPETVFRLKGKGLPNMRYGRRGDLIVN 340 (369)
T ss_pred EecCCEEEEEEeCHHHHhCCCEEEEeCC------CC------cEEEEEeCCCcCCCCEEEECCCCCCCCCCCCCCCEEEE
Confidence 4678999999999999999999888764 55 368999999999999999999999864 4468999999
Q ss_pred EEEeCCcceeecCCceEE
Q 022539 191 VEEKPHAVFQRDGNDLVV 208 (295)
Q Consensus 191 i~v~~h~~f~r~g~DL~~ 208 (295)
|.+..|+.|++++.+|+.
T Consensus 341 ~~v~~P~~l~~~~~~ll~ 358 (369)
T PRK14282 341 VHVEIPKRLSREERKLLK 358 (369)
T ss_pred EEEECCCCCCHHHHHHHH
Confidence 999999999998887753
No 67
>PF01556 CTDII: DnaJ C terminal domain; InterPro: IPR002939 Molecular chaperones are a diverse family of proteins that function to protect proteins in the intracellular milieu from irreversible aggregation during synthesis and in times of cellular stress. The bacterial molecular chaperone DnaK is an enzyme that couples cycles of ATP binding, hydrolysis, and ADP release by an N-terminal ATP-hydrolizing domain to cycles of sequestration and release of unfolded proteins by a C-terminal substrate binding domain. Dimeric GrpE is the co-chaperone for DnaK, and acts as a nucleotide exchange factor, stimulating the rate of ADP release 5000-fold []. DnaK is itself a weak ATPase; ATP hydrolysis by DnaK is stimulated by its interaction with another co-chaperone, DnaJ. Thus the co-chaperones DnaJ and GrpE are capable of tightly regulating the nucleotide-bound and substrate-bound state of DnaK in ways that are necessary for the normal housekeeping functions and stress-related functions of the DnaK molecular chaperone cycle. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. Thus, DnaK and DnaJ may bind to one and the same polypeptide chain to form a ternary complex. The formation of a ternary complex may result in cis-interaction of the J-domain of DnaJ with the ATPase domain of DnaK. An unfolded polypeptide may enter the chaperone cycle by associating first either with ATP-liganded DnaK or with DnaJ. DnaK interacts with both the backbone and side chains of a peptide substrate; it thus shows binding polarity and admits only L-peptide segments. In contrast, DnaJ has been shown to bind both L- and D-peptides and is assumed to interact only with the side chains of the substrate. This domain consists of the C-terminal region of the DnaJ protein. The function of this domain is unknown. It is found associated with IPR001623 from INTERPRO and IPR001305 from INTERPRO. ; GO: 0051082 unfolded protein binding, 0006457 protein folding; PDB: 2Q2G_A 2QLD_A 3AGX_A 3AGZ_A 3AGY_A 3I38_J 3LZ8_B 2B26_B 1C3G_A 1XAO_B ....
Probab=98.99 E-value=6.5e-10 Score=82.27 Aligned_cols=72 Identities=25% Similarity=0.346 Sum_probs=56.2
Q ss_pred CeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCCCcCCCeEecCCCCCCCC-C-CCCccEEEEEEE
Q 022539 116 PIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQEP-G-LPPADLIFVVEE 193 (295)
Q Consensus 116 di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~-~-~~~GDliv~i~v 193 (295)
|+.+++.|||.||+.|+++++... +| +.++|.||+|+++|+.++++|+|.+.. + ...|||+|++++
T Consensus 1 DL~~~~~I~l~~al~G~~i~i~~l------~g------~~~~i~ip~~~~~g~~~~i~g~G~p~~~~~~~~GdL~v~~~V 68 (81)
T PF01556_consen 1 DLYCTIPISLKEALLGGTISIPTL------DG------KTIKIKIPPGTQPGQQLRIKGKGMPKPKGGGKRGDLIVKFEV 68 (81)
T ss_dssp EEEEEEEEEHHHHHH-EEEEEE-T------TS-------EEEEEETST-STT-EEEETTESEEESSSTTSBEEEEEEEEE
T ss_pred CeEEEEEeCHHHHhCCCEEEEECC------CC------CEEEEeccCccCCCcEEeecCCCCCcCCCCCCcCCEEEEEEE
Confidence 578999999999999999888665 56 479999999999999999999999753 3 369999999999
Q ss_pred eCCcce
Q 022539 194 KPHAVF 199 (295)
Q Consensus 194 ~~h~~f 199 (295)
.-+..+
T Consensus 69 ~~P~~l 74 (81)
T PF01556_consen 69 EFPKKL 74 (81)
T ss_dssp E--SST
T ss_pred ECCCCC
Confidence 855443
No 68
>KOG1150 consensus Predicted molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.98 E-value=3.6e-10 Score=95.00 Aligned_cols=66 Identities=29% Similarity=0.643 Sum_probs=59.9
Q ss_pred CCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCcccccccc
Q 022539 2 GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYD 67 (295)
Q Consensus 2 ~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd 67 (295)
+-|+|+||.|.+..+.++||+.||+|++..|||+|+++.+.|...|..+.+||..|-|+..|...+
T Consensus 52 nLNpfeVLqIdpev~~edikkryRklSilVHPDKN~Dd~~rAqkAFdivkKA~k~l~n~~~rkr~~ 117 (250)
T KOG1150|consen 52 NLNPFEVLQIDPEVTDEDIKKRYRKLSILVHPDKNPDDAERAQKAFDIVKKAYKLLENDKIRKRCL 117 (250)
T ss_pred ccChHHHHhcCCCCCHHHHHHHHHhhheeecCCCCcccHHHHHHHHHHHHHHHHHHhCHHHHHHHH
Confidence 468999999999999999999999999999999999987789999999999999999987554433
No 69
>PRK14290 chaperone protein DnaJ; Provisional
Probab=98.92 E-value=1.5e-09 Score=102.25 Aligned_cols=85 Identities=11% Similarity=0.135 Sum_probs=74.3
Q ss_pred CCCCCeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCCCcCCCeEecCCCCCCCCC-CCCccEEEE
Q 022539 112 PTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQEPG-LPPADLIFV 190 (295)
Q Consensus 112 ~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDliv~ 190 (295)
+.+.|+.+.+.|||.||+.|+++.|... .| .++|.||+|+++|++++++|+|.+.++ ..+|||+|+
T Consensus 267 R~G~DL~~~~~Isl~eAl~G~~~~I~~~------~g-------~i~V~Ip~g~~~g~~iri~g~G~p~~~~~~~GDL~V~ 333 (365)
T PRK14290 267 RINDDLYVDQKINFPQAALGGEIEIKLF------RE-------KYNLKIPEGTQPGEVLKIKGAGMPHLNGHGSGDLLVR 333 (365)
T ss_pred EecCCEEEEEEeCHHHHhCCCEEEEEcC------Cc-------eEEEEECCccCCCcEEEECCCCCCCCCCCCCCCEEEE
Confidence 4578999999999999999999988763 33 589999999999999999999998654 358999999
Q ss_pred EEEeCCcceeecCCceEEE
Q 022539 191 VEEKPHAVFQRDGNDLVVN 209 (295)
Q Consensus 191 i~v~~h~~f~r~g~DL~~~ 209 (295)
|++..++.|++++.+|+.+
T Consensus 334 ~~V~~P~~l~~~~~~ll~~ 352 (365)
T PRK14290 334 INVEVPKRLTSKQKELIRE 352 (365)
T ss_pred EEEECCCCCCHHHHHHHHH
Confidence 9999999999988877654
No 70
>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]
Probab=98.90 E-value=6.7e-10 Score=97.42 Aligned_cols=67 Identities=39% Similarity=0.574 Sum_probs=59.1
Q ss_pred CCccceecCCC---CCCHHHHHHHHHHHHHHhCCCCCCCC-cHHHHHHHHHHHHHhhhcCCccccccccCC
Q 022539 3 VDYYNILKVSR---GATEDDLKKSYKRLAMKWHPDKNPAT-NQQAEAKFKLISEAYDVLSDPRKRQIYDLY 69 (295)
Q Consensus 3 ~d~Y~iLgv~~---~a~~~eIk~ayr~la~~~hPd~~~~~-~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~ 69 (295)
.|+|.+|||+. .|++.+|.+|+++...+||||+..+. .....+.|+.|+.||++|+|+.+|.+||..
T Consensus 43 ~DlYa~lgLskyR~ka~~~qi~kah~kkv~kyHPDk~aa~g~~~~d~fFk~iqkA~evL~D~~~R~qyDS~ 113 (379)
T COG5269 43 VDLYALLGLSKYRTKAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEFFKLIQKAREVLGDRKLRLQYDSN 113 (379)
T ss_pred hhHHHHhchHhhhcCCCcHHHHHHHHHHHHHhCccchhccCCCCcHHHHHHHHHHHHHhccHHHHhhcccc
Confidence 58999999988 78999999999999999999997321 124678999999999999999999999974
No 71
>PRK14294 chaperone protein DnaJ; Provisional
Probab=98.90 E-value=2.4e-09 Score=100.95 Aligned_cols=85 Identities=18% Similarity=0.191 Sum_probs=73.1
Q ss_pred CCCCCCeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCCCcCCCeEecCCCCCCCCC-CCCccEEE
Q 022539 111 KPTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQEPG-LPPADLIF 189 (295)
Q Consensus 111 ~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDliv 189 (295)
.+++.|+++++.|||.||+.|+++.|... +| .++|.||+|+++|++++++|+|.+.++ ..+|||+|
T Consensus 260 ~R~G~DL~~~~~Isl~eAl~G~~~~i~tl------dG-------~~~v~ip~g~~~g~~iri~G~G~p~~~~~~~GDL~V 326 (366)
T PRK14294 260 ERDGNDVHCKVPISFVQAALGAQIEVPTL------EG-------ERELKIPKGTQPGDIFRFKGKGIPSLRGGGRGDQII 326 (366)
T ss_pred eecCCCEEEEEEeCHHHHhCCCeEEEECC------CC-------cEEEEECCCcCCCCEEEECCCCCCCCCCCCCCCEEE
Confidence 35688999999999999999999888864 45 369999999999999999999998654 35899999
Q ss_pred EEEEeCCcceeecCCceEE
Q 022539 190 VVEEKPHAVFQRDGNDLVV 208 (295)
Q Consensus 190 ~i~v~~h~~f~r~g~DL~~ 208 (295)
+|++..|+.|.+...+|+.
T Consensus 327 ~~~v~~P~~l~~~q~~ll~ 345 (366)
T PRK14294 327 EVEVKVPTRLTKKQEELLT 345 (366)
T ss_pred EEEEECCCCCCHHHHHHHH
Confidence 9999999999887766643
No 72
>PRK10266 curved DNA-binding protein CbpA; Provisional
Probab=98.89 E-value=8.2e-09 Score=95.09 Aligned_cols=77 Identities=18% Similarity=0.331 Sum_probs=63.1
Q ss_pred ecCCceEEEEEecHHHHhcCCEEEE----eccC--C-------cEEEEeeCCCCCCCcEEEEcCCCcCCCCCCCCCCCEE
Q 022539 201 RDGNDLVVNHKISLLEALTGLSLNL----TALD--G-------RNLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLI 267 (295)
Q Consensus 201 r~g~DL~~~~~I~l~~Al~G~~~~i----~~l~--g-------~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GDL~ 267 (295)
+.|.|+++.+.|+|.||++|+...| ++++ | ++++|+||+++++|++++++|+|+|... ...+||||
T Consensus 115 ~kg~di~~~v~isLee~~~G~~k~i~~~~~~~~g~G~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~~GDl~ 193 (306)
T PRK10266 115 ARGHDIEIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEIPKTLNVKIPAGVGNGQRIRLKGQGTPGEN-GGPNGDLW 193 (306)
T ss_pred CCCCceEEEEEEEHHHhcCCceEEEEEecccccCCCeEEEeeeEEEEEEECCCCcCCcEEEEecCCcCCCC-CCCCccEE
Confidence 4689999999999999999996544 4444 3 4689999999999999999999999654 35689999
Q ss_pred EEEEEECCCCC
Q 022539 268 IKFDIMFPSRL 278 (295)
Q Consensus 268 v~~~v~~P~~l 278 (295)
|+|+|.-.+.+
T Consensus 194 v~i~v~ph~~f 204 (306)
T PRK10266 194 LVIHIAPHPLF 204 (306)
T ss_pred EEEEEcCCCCe
Confidence 99999943333
No 73
>PRK14285 chaperone protein DnaJ; Provisional
Probab=98.88 E-value=2.8e-09 Score=100.42 Aligned_cols=83 Identities=16% Similarity=0.189 Sum_probs=71.9
Q ss_pred CCCCCeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCCCcCCCeEecCCCCCCCCCC-CCccEEEE
Q 022539 112 PTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQEPGL-PPADLIFV 190 (295)
Q Consensus 112 ~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~-~~GDliv~ 190 (295)
+.+.|+..++.|||.||+.|+++.|... +| +.++|.||+|+++|++++++|+|.+.++. ..|||+|+
T Consensus 263 R~G~dL~~~~~Isl~eAl~G~~~~i~tl------dG------~~v~V~Ip~g~~~g~~irl~GkG~p~~~~~~~GDL~V~ 330 (365)
T PRK14285 263 RNGKDLYATLPISFTQAALGKEIKIQTI------AS------KKIKIKIPKGTENDEQIIIKNEGMPILHTEKFGNLILI 330 (365)
T ss_pred EeccceEEEEecCHHHHhCCCEEEEECC------CC------CEEEEEeCCCcCCCcEEEECCCCccCCCCCCCCCEEEE
Confidence 4578999999999999999999888875 55 36899999999999999999999986544 46999999
Q ss_pred EEEeCCcceeecCCce
Q 022539 191 VEEKPHAVFQRDGNDL 206 (295)
Q Consensus 191 i~v~~h~~f~r~g~DL 206 (295)
|++..|+.|.+++..+
T Consensus 331 ~~v~~P~~l~~~q~~~ 346 (365)
T PRK14285 331 IKIKTPKNLNSNAIKL 346 (365)
T ss_pred EEEECCCCCCHHHHHH
Confidence 9999999988876544
No 74
>PRK14289 chaperone protein DnaJ; Provisional
Probab=98.82 E-value=1.4e-08 Score=96.54 Aligned_cols=83 Identities=18% Similarity=0.268 Sum_probs=69.6
Q ss_pred cCCceEEEEEecHHHHhcCCEEEEecc-----------------------------------------------------
Q 022539 202 DGNDLVVNHKISLLEALTGLSLNLTAL----------------------------------------------------- 228 (295)
Q Consensus 202 ~g~DL~~~~~I~l~~Al~G~~~~i~~l----------------------------------------------------- 228 (295)
.|.|+.+.+.|||.|++.|++.+|...
T Consensus 126 ~g~di~~~l~vsLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G 205 (386)
T PRK14289 126 RGSDLRVKVKLNLKEISTGVEKKFKVKKYVPCSHCHGTGAEGNNGSETCPTCKGSGSVTRVQNTILGTMQTQSTCPTCNG 205 (386)
T ss_pred CCCCeEEEEEEEHHHhhCCeEEEEEEEeecccCCCCCCCCCCCCCCCcCCCCcCeEEEEEEEecccceEEEEEecCCCCc
Confidence 488999999999999999998766431
Q ss_pred -------------------CCcEEEEeeCCCCCCCcEEEEcCCCcCCCCCCCCCCCEEEEEEEECCCCCCHHHHHH
Q 022539 229 -------------------DGRNLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMFPSRLTAEQKSD 285 (295)
Q Consensus 229 -------------------~g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~~ 285 (295)
+.++++|.||+++++|++++|+|+|+|... ...+|||||+|+|..|+.++.+..++
T Consensus 206 ~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~-~~~~GDL~v~v~v~~~~~f~r~g~DL 280 (386)
T PRK14289 206 EGKIIKKKCKKCGGEGIVYGEEVITVKIPAGVAEGMQLSMNGKGNAGKH-GGVNGDLLVVIEEEPHPELIRDENDL 280 (386)
T ss_pred cccccCcCCCCCCCCcEEeeeEEEEEEeCCCCCCCCEEEEeccccCCCC-CCCCccEEEEEEEecCCcccccccce
Confidence 113588999999999999999999998643 24689999999999999988777665
No 75
>PRK10767 chaperone protein DnaJ; Provisional
Probab=98.82 E-value=5.9e-09 Score=98.55 Aligned_cols=85 Identities=14% Similarity=0.157 Sum_probs=73.2
Q ss_pred CCCCCeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCCCcCCCeEecCCCCCCCC-CCCCccEEEE
Q 022539 112 PTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQEP-GLPPADLIFV 190 (295)
Q Consensus 112 ~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDliv~ 190 (295)
+.+.|+..++.|||.+|+.|+++.|... +| .++|.||+|+++|++++++|+|.+.. +...|||||+
T Consensus 259 R~G~DL~~~~~Isl~eAl~G~~~~i~~l------dG-------~i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~v~ 325 (371)
T PRK10767 259 RDGNDLYCEVPISFTTAALGGEIEVPTL------DG-------RVKLKIPEGTQTGKLFRLRGKGVKSVRSGARGDLYCQ 325 (371)
T ss_pred EecCCEEEEEEeCHHHHhCCCeEEEecC------CC-------cEEEEeCCCCCCCCEEEECCCCcCCCCCCCCCCEEEE
Confidence 4578999999999999999999888654 45 58999999999999999999999864 3467999999
Q ss_pred EEEeCCcceeecCCceEEE
Q 022539 191 VEEKPHAVFQRDGNDLVVN 209 (295)
Q Consensus 191 i~v~~h~~f~r~g~DL~~~ 209 (295)
|+|..++.|++++.+|+.+
T Consensus 326 ~~v~~P~~l~~~~~~ll~~ 344 (371)
T PRK10767 326 VVVETPVNLTKRQKELLEE 344 (371)
T ss_pred EEEECCCCCCHHHHHHHHH
Confidence 9999999898888776543
No 76
>PRK14284 chaperone protein DnaJ; Provisional
Probab=98.79 E-value=8.6e-09 Score=98.04 Aligned_cols=84 Identities=13% Similarity=0.191 Sum_probs=70.1
Q ss_pred CCCCCCeeeecccCHHHHhcCceeEEEEeEEeeCCC-CcEEEEEEEEEEEeCCCCcCCCeEecCCCCCCCCC-CCCccEE
Q 022539 111 KPTPTPIETQLLCTLEELYKGARKKMKISRVLPDHF-GKPITVQEILKIDIKPGWKKGTKITFPEKGNQEPG-LPPADLI 188 (295)
Q Consensus 111 ~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~-G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDli 188 (295)
.+++.|+++++.|||.||+.|++++|... + | ..++|.||+|+++|++++++|+|.+..+ ..+||||
T Consensus 274 ~R~G~DL~~~~~Isl~eAl~G~~~~v~tl------d~g------~~i~v~Ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~ 341 (391)
T PRK14284 274 ERRGDDLILELPIGFVDAALGMKKEIPTL------LKE------GTCRLTIPEGIQSGTILKVRGQGFPNVHGKGRGDLL 341 (391)
T ss_pred eeecCCEEEEEEecHHHHhCCCeEEEeec------CCC------cEEEEEECCccCCCeEEEECCCCCCCCCCCCCCcEE
Confidence 35688999999999999999999888754 2 2 3689999999999999999999998653 4689999
Q ss_pred EEEEEeCCcceeecCCce
Q 022539 189 FVVEEKPHAVFQRDGNDL 206 (295)
Q Consensus 189 v~i~v~~h~~f~r~g~DL 206 (295)
|+|++..++.++.....|
T Consensus 342 V~~~v~~P~~l~~~q~~l 359 (391)
T PRK14284 342 VRISVETPQNLSEEQKEL 359 (391)
T ss_pred EEEEEECCCCCCHHHHHH
Confidence 999999887776655443
No 77
>PRK14298 chaperone protein DnaJ; Provisional
Probab=98.78 E-value=7.8e-09 Score=97.81 Aligned_cols=84 Identities=17% Similarity=0.237 Sum_probs=72.3
Q ss_pred CCCCCeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCCCcCCCeEecCCCCCCCCC-CCCccEEEE
Q 022539 112 PTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQEPG-LPPADLIFV 190 (295)
Q Consensus 112 ~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDliv~ 190 (295)
+++.|+++.+.|||.||+.|+++.|... +| .++|.||+|+++|++++++|+|.+..+ ...|||||+
T Consensus 262 R~G~DL~~~~~Isl~eAl~G~~~~i~tl------dG-------~i~v~ip~g~~~g~~lri~g~G~p~~~~~~~GDL~V~ 328 (377)
T PRK14298 262 RVGDDIISEIPISFTQAALGADIMVPTL------YG-------KVKMNIPPGTQTHSVFRLKDKGMPRLHGHGKGDQLVK 328 (377)
T ss_pred EEcCcEEEEEEeCHHHHhCCCeEEEecC------CC-------CEEEEeCCCcccCCEEEECCCCCCCCCCCCCCCEEEE
Confidence 4578999999999999999999888764 55 378999999999999999999998643 457999999
Q ss_pred EEEeCCcceeecCCceEE
Q 022539 191 VEEKPHAVFQRDGNDLVV 208 (295)
Q Consensus 191 i~v~~h~~f~r~g~DL~~ 208 (295)
|++..++.+++++.+|+.
T Consensus 329 ~~V~~P~~ls~~~~~ll~ 346 (377)
T PRK14298 329 VIVKTPTKLTQEQKELLR 346 (377)
T ss_pred EEEECCCCCCHHHHHHHH
Confidence 999999988888776643
No 78
>PRK14300 chaperone protein DnaJ; Provisional
Probab=98.78 E-value=2.2e-08 Score=94.60 Aligned_cols=78 Identities=12% Similarity=0.191 Sum_probs=67.4
Q ss_pred CCCCCeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCCCcCCCeEecCCCCCCCC-CCCCccEEEE
Q 022539 112 PTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQEP-GLPPADLIFV 190 (295)
Q Consensus 112 ~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDliv~ 190 (295)
+++.|+++++.|||.+|+.|+++.|... +| +.++|.||+|+++|++++++|+|.+.+ +..+|||+|+
T Consensus 262 R~G~Dl~~~~~Isl~~Al~G~~~~i~~l------dg------~~i~v~Ip~g~~~g~~iri~g~G~p~~~~~~~GDL~V~ 329 (372)
T PRK14300 262 VDGANLHCKLPISFVNAALGGEIEVPVI------EG------GKVNLTIPAGTQNGDQLRLRSKGMSKMRSTIRGDMLTH 329 (372)
T ss_pred EecCCEEEEEecCHHHHhCCCEEEEecC------CC------CEEEEEECCccCCCcEEEECCCCCCCCCCCCCCCEEEE
Confidence 4678999999999999999999888874 44 369999999999999999999999865 3568999999
Q ss_pred EEEeCCcceee
Q 022539 191 VEEKPHAVFQR 201 (295)
Q Consensus 191 i~v~~h~~f~r 201 (295)
+++..+..+.-
T Consensus 330 ~~v~~P~~ls~ 340 (372)
T PRK14300 330 IHVEVPKNLSK 340 (372)
T ss_pred EEEECCCCCCH
Confidence 99998876543
No 79
>TIGR02349 DnaJ_bact chaperone protein DnaJ. This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.
Probab=98.76 E-value=1.3e-08 Score=95.59 Aligned_cols=81 Identities=15% Similarity=0.200 Sum_probs=69.1
Q ss_pred CCCCCeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCCCcCCCeEecCCCCCCCCC-CCCccEEEE
Q 022539 112 PTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQEPG-LPPADLIFV 190 (295)
Q Consensus 112 ~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDliv~ 190 (295)
+++.|+...+.|||.||+.|+++.|... +| .++|.||+|+++|++++++|+|.+..+ ..+|||||+
T Consensus 264 r~g~DL~~~~~isl~eAl~G~~~~i~~l------dG-------~i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~i~ 330 (354)
T TIGR02349 264 RDGNDLYIEVPISFTQAILGGEIEVPTL------DG-------DVKLKIPAGTQSGTVFRLKGKGVPRLRGNGRGDLLVT 330 (354)
T ss_pred EecCCEEEEEEeCHHHHhCCCeEEEecC------Cc-------eEEEEECCcccCCcEEEECCCCcCCCCCCCCCCEEEE
Confidence 4578999999999999999998888764 44 589999999999999999999998654 368999999
Q ss_pred EEEeCCcceeecCCc
Q 022539 191 VEEKPHAVFQRDGND 205 (295)
Q Consensus 191 i~v~~h~~f~r~g~D 205 (295)
|++..++.++++..+
T Consensus 331 ~~v~~P~~l~~~~~~ 345 (354)
T TIGR02349 331 VKVETPKNLSKEQKE 345 (354)
T ss_pred EEEECCCCCCHHHHH
Confidence 999988877765543
No 80
>PRK14279 chaperone protein DnaJ; Provisional
Probab=98.75 E-value=3.1e-08 Score=94.17 Aligned_cols=75 Identities=13% Similarity=0.171 Sum_probs=65.2
Q ss_pred CCCCCeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCCCcCCCeEecCCCCCCCCCCCCccEEEEE
Q 022539 112 PTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQEPGLPPADLIFVV 191 (295)
Q Consensus 112 ~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDliv~i 191 (295)
+++.|+.+++.|||.||+.|.++.|... +| .++|.||+|+++|++++++|+|.+..+..+|||||+|
T Consensus 290 R~G~DL~~~~~Isl~eAl~G~~~~v~~l------dg-------~i~v~Ip~g~~~g~~iri~g~G~p~~~~~~GDL~I~~ 356 (392)
T PRK14279 290 RDGDDLTVTVPVSFTELALGSTLSVPTL------DG-------PVGVKVPAGTADGRILRVRGRGVPKRSGGAGDLLVTV 356 (392)
T ss_pred eecCcEEEEEEccHHHHcCCceEEEEcC------Cc-------eEEEEECCCCCCCCEEEECCCCCCCCCCCCCCEEEEE
Confidence 5688999999999999999998887754 44 4899999999999999999999987666789999999
Q ss_pred EEeCCcce
Q 022539 192 EEKPHAVF 199 (295)
Q Consensus 192 ~v~~h~~f 199 (295)
++.-+...
T Consensus 357 ~v~~P~~L 364 (392)
T PRK14279 357 KVAVPPNL 364 (392)
T ss_pred EEECCCCC
Confidence 99976543
No 81
>PRK14287 chaperone protein DnaJ; Provisional
Probab=98.74 E-value=2.9e-08 Score=93.76 Aligned_cols=81 Identities=17% Similarity=0.188 Sum_probs=69.1
Q ss_pred CCCCCeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCCCcCCCeEecCCCCCCCC-CCCCccEEEE
Q 022539 112 PTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQEP-GLPPADLIFV 190 (295)
Q Consensus 112 ~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDliv~ 190 (295)
+.+.|++..+.|||.||+.|++++|... +| .++|.||+|+++|++++++|+|.+.. +...|||+|+
T Consensus 259 R~G~DL~~~~~Isl~eAl~G~~~~i~~l------dg-------~i~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~V~ 325 (371)
T PRK14287 259 RDGDDIYCEMPLTFPQVALGDEIEVPTL------NG-------KVKLKIPAGTQTGTSFRLRGKGVPNVHGRGQGDQHVQ 325 (371)
T ss_pred EecCCeEEEEeccHHHHhCCCEEEEEcC------CC-------CEEEEECCCccCCcEEEEcCCCccCCCCCCCCCEEEE
Confidence 5688999999999999999999888764 45 37999999999999999999999864 3457999999
Q ss_pred EEEeCCcceeecCCc
Q 022539 191 VEEKPHAVFQRDGND 205 (295)
Q Consensus 191 i~v~~h~~f~r~g~D 205 (295)
|++..++.++++...
T Consensus 326 ~~v~~P~~l~~~q~~ 340 (371)
T PRK14287 326 VRVVTPKNLTEKEKE 340 (371)
T ss_pred EEEEcCCCCCHHHHH
Confidence 999999877765543
No 82
>PRK14301 chaperone protein DnaJ; Provisional
Probab=98.73 E-value=4e-08 Score=92.93 Aligned_cols=81 Identities=15% Similarity=0.140 Sum_probs=68.5
Q ss_pred CCCCCCeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCCCcCCCeEecCCCCCCCCC-CCCccEEE
Q 022539 111 KPTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQEPG-LPPADLIF 189 (295)
Q Consensus 111 ~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDliv 189 (295)
.+++.|+++++.|||.||+.|+++.|... +| .++|.||+|+++|++++++|+|.+..+ ..+|||||
T Consensus 260 ~r~G~DL~~~~~Isl~eAl~G~~~~v~tl------dG-------~i~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~I 326 (373)
T PRK14301 260 QRQGQDLVVTQEISFVQAALGDRIEVPTL------DD-------PVTLDIPKGTQSGEVFRLRGKGLPYLGSSQKGDLLV 326 (373)
T ss_pred eeecCcEEEEEEecHHHHhCCCeEEEecC------Cc-------cEEEEECCCcCCCcEEEEcCCCCCCCCCCCCCCEEE
Confidence 35688999999999999999999888664 45 389999999999999999999998654 35799999
Q ss_pred EEEEeCCcceeecCC
Q 022539 190 VVEEKPHAVFQRDGN 204 (295)
Q Consensus 190 ~i~v~~h~~f~r~g~ 204 (295)
+|.+..++.+.....
T Consensus 327 ~~~V~~P~~l~~~q~ 341 (373)
T PRK14301 327 EVSVVTPTKLTKRQE 341 (373)
T ss_pred EEEEECCCCCCHHHH
Confidence 999998876655443
No 83
>PRK14295 chaperone protein DnaJ; Provisional
Probab=98.71 E-value=4.9e-08 Score=92.74 Aligned_cols=75 Identities=19% Similarity=0.211 Sum_probs=65.0
Q ss_pred CCCCCeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCCCcCCCeEecCCCCCCCCCCCCccEEEEE
Q 022539 112 PTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQEPGLPPADLIFVV 191 (295)
Q Consensus 112 ~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDliv~i 191 (295)
+.+.|+++++.|||.+|+.|++++|... +| +.++|.||+|+++|++++++|+|.+..++.+|||||+|
T Consensus 283 R~G~DL~~~~~Isl~eAl~G~~~~I~tl------dG------~~~~v~ip~g~~~g~~iri~G~G~p~~~~~~GDL~i~~ 350 (389)
T PRK14295 283 RSGDNLTVTVPVTFPEAALGAEVRVPTL------GG------PPVTVKLPPGTPNGRVLRVRGKGAVRKDGTRGDLLVTV 350 (389)
T ss_pred EecCCEEEEEeecHHHHhCCCeEEEECC------CC------CEEEEEECCccCCCcEEEECCCCcCCCCCCCCCEEEEE
Confidence 4578999999999999999999888653 45 36999999999999999999999987666789999999
Q ss_pred EEeCCcc
Q 022539 192 EEKPHAV 198 (295)
Q Consensus 192 ~v~~h~~ 198 (295)
.+.-+..
T Consensus 351 ~v~~P~~ 357 (389)
T PRK14295 351 EVAVPKD 357 (389)
T ss_pred EEECCCC
Confidence 9996543
No 84
>PRK14291 chaperone protein DnaJ; Provisional
Probab=98.70 E-value=5.2e-08 Score=92.42 Aligned_cols=74 Identities=24% Similarity=0.255 Sum_probs=64.4
Q ss_pred CCCCCeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCCCcCCCeEecCCCCCCCCC-CCCccEEEE
Q 022539 112 PTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQEPG-LPPADLIFV 190 (295)
Q Consensus 112 ~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDliv~ 190 (295)
+.+.|+++.+.|||+||+.|+++.|... +| +.++|.||+|+++|++++++|+|.+..+ ..+|||+|+
T Consensus 272 r~G~DL~~~~~Isl~eAl~G~~~~i~~l------dG------~~l~V~Ip~g~~~G~~i~i~G~G~p~~~~~~~GDL~V~ 339 (382)
T PRK14291 272 RRGDNLYLDVNITVAEAVLGTELEVPLL------DG------KKEKVKIPPGTKEGDKIRVPGKGMPRLKGSGYGDLVVR 339 (382)
T ss_pred eecCCeEEEEEeeHHHHhCCCEEEEecC------CC------CEEEEEECCccCCCCEEEECCCCCCCCCCCCCCCEEEE
Confidence 5688999999999999999999988874 55 3689999999999999999999998653 457999999
Q ss_pred EEEeCCc
Q 022539 191 VEEKPHA 197 (295)
Q Consensus 191 i~v~~h~ 197 (295)
|++.-+.
T Consensus 340 ~~V~~P~ 346 (382)
T PRK14291 340 VHIDVPK 346 (382)
T ss_pred EEEEeCC
Confidence 9999653
No 85
>PRK14288 chaperone protein DnaJ; Provisional
Probab=98.70 E-value=5.9e-08 Score=91.63 Aligned_cols=81 Identities=14% Similarity=0.142 Sum_probs=68.8
Q ss_pred CCCCCCeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCCCcCCCeEecCCCCCCCCCC-CCccEEE
Q 022539 111 KPTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQEPGL-PPADLIF 189 (295)
Q Consensus 111 ~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~-~~GDliv 189 (295)
.+.|.||.+.+.|||.||+.|+++.|... +|+ .++|.||+|+++|+.++++|+|.+.++. ..|||+|
T Consensus 254 ~R~G~DL~~~~~Isl~eAllG~~i~v~tL------dG~------~l~i~i~~~~~~g~~~~i~g~G~p~~~~~~~GDL~v 321 (369)
T PRK14288 254 KREGCDLFIEAPVFFTTIALGHTIKVPSL------KGD------ELELKIPRNARDRQTFAFRNEGVKHPESSYRGSLIV 321 (369)
T ss_pred EEeCCEEEEEEecCHHHHhcCCEEEeecC------CCC------EEEEEeCCCCCCCcEEEEcCCCCCCCCCCCCCCEEE
Confidence 35688999999999999999998888765 562 5899999999999999999999986554 4699999
Q ss_pred EEEEeCCcceeecC
Q 022539 190 VVEEKPHAVFQRDG 203 (295)
Q Consensus 190 ~i~v~~h~~f~r~g 203 (295)
++.+..++.+..+.
T Consensus 322 ~~~v~~P~~ls~~q 335 (369)
T PRK14288 322 ELQVIYPKSLNKEQ 335 (369)
T ss_pred EEEEECCCCCCHHH
Confidence 99999887765443
No 86
>PRK14293 chaperone protein DnaJ; Provisional
Probab=98.68 E-value=2.5e-08 Score=94.31 Aligned_cols=83 Identities=17% Similarity=0.211 Sum_probs=71.7
Q ss_pred CCCCCeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCCCcCCCeEecCCCCCCCCCC--CCccEEE
Q 022539 112 PTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQEPGL--PPADLIF 189 (295)
Q Consensus 112 ~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~--~~GDliv 189 (295)
+++.|+..+++|||.||+.|+++.|... +| .++|.||+|+++|++++++|+|.+..+. ..|||||
T Consensus 264 r~g~DL~~~~~Isl~eAl~G~~~~i~~l------dG-------~~~i~ip~~~~~g~~~ri~g~G~p~~~~~~~~GDL~v 330 (374)
T PRK14293 264 RDGINILSEIKISYLQAILGDTLEVDTV------DG-------PVELTIPAGTQPNTVLTLENKGVPRLGNPVARGDHLI 330 (374)
T ss_pred hhhhceEEEeccCHHHHhCCCEEEecCC------CC-------CEEEEeCCCCCCCCEEEECCCCCCCCCCCCCcCCEEE
Confidence 4578999999999999999999888875 55 3689999999999999999999986543 4799999
Q ss_pred EEEEeCCcceeecCCceE
Q 022539 190 VVEEKPHAVFQRDGNDLV 207 (295)
Q Consensus 190 ~i~v~~h~~f~r~g~DL~ 207 (295)
++++..++.+++++.+++
T Consensus 331 ~~~v~~P~~l~~~~~~l~ 348 (374)
T PRK14293 331 TVKVKIPTRISDEERELL 348 (374)
T ss_pred EEEEECCCCCCHHHHHHH
Confidence 999999988888877664
No 87
>PRK14276 chaperone protein DnaJ; Provisional
Probab=98.63 E-value=1.1e-07 Score=90.21 Aligned_cols=75 Identities=16% Similarity=0.144 Sum_probs=64.7
Q ss_pred CCCCCeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCCCcCCCeEecCCCCCCCCC-CCCccEEEE
Q 022539 112 PTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQEPG-LPPADLIFV 190 (295)
Q Consensus 112 ~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDliv~ 190 (295)
+.+.|+++.+.|||.||+.|++++|... +| .++|.||+|+++|++++++|+|.+..+ ..+|||||+
T Consensus 267 R~G~DL~~~~~Isl~eAl~G~~~~v~tl------dg-------~i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~V~ 333 (380)
T PRK14276 267 RDGSTIYYTLPISFVQAALGDTVEVPTV------HG-------DVELKIPAGTQTGKKFRLRGKGAPKLRGGGNGDQHVT 333 (380)
T ss_pred eecceEEEEEecCHHHHhCCCeEEEEcC------CC-------cEEEEECCCCCCCCEEEECCCCcCCCCCCCCCCEEEE
Confidence 5688999999999999999999888775 45 379999999999999999999998653 457999999
Q ss_pred EEEeCCcce
Q 022539 191 VEEKPHAVF 199 (295)
Q Consensus 191 i~v~~h~~f 199 (295)
|++.-+...
T Consensus 334 ~~v~~P~~l 342 (380)
T PRK14276 334 VNIVTPTKL 342 (380)
T ss_pred EEEECCCCC
Confidence 999976543
No 88
>PRK14292 chaperone protein DnaJ; Provisional
Probab=98.60 E-value=1.3e-07 Score=89.40 Aligned_cols=80 Identities=16% Similarity=0.176 Sum_probs=67.6
Q ss_pred CCCCCCeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCCCcCCCeEecCCCCCCCC-CCCCccEEE
Q 022539 111 KPTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQEP-GLPPADLIF 189 (295)
Q Consensus 111 ~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDliv 189 (295)
.+.+.|+...+.|+|.||+.|+++.|... +|+ .+|.||+|+++|++++++|+|.+.. +..+|||||
T Consensus 258 ~r~g~dL~~~~~isl~eAl~G~~~~i~tl------dG~-------~~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~V 324 (371)
T PRK14292 258 RREQEHLIYEARIGFAKAALGGQITVPTL------DGP-------QVIEVKPGTQHGDLHRLRGQGMPRLQGAGTGDLIV 324 (371)
T ss_pred ccchhceeEEeccCHHHHhCCCeEEEECC------CCC-------EEEecCCCcCCCcEEEECCCCCCCCCCCCCCCEEE
Confidence 35678999999999999999999888854 452 3699999999999999999999864 446899999
Q ss_pred EEEEeCCcceeecC
Q 022539 190 VVEEKPHAVFQRDG 203 (295)
Q Consensus 190 ~i~v~~h~~f~r~g 203 (295)
++++..++.+..+.
T Consensus 325 ~~~v~~P~~l~~~q 338 (371)
T PRK14292 325 EYEIAVPKQLSPEA 338 (371)
T ss_pred EEEEECCCCCCHHH
Confidence 99999987666544
No 89
>PRK14280 chaperone protein DnaJ; Provisional
Probab=98.58 E-value=2e-07 Score=88.33 Aligned_cols=75 Identities=20% Similarity=0.242 Sum_probs=64.1
Q ss_pred CCCCCeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCCCcCCCeEecCCCCCCCC-CCCCccEEEE
Q 022539 112 PTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQEP-GLPPADLIFV 190 (295)
Q Consensus 112 ~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDliv~ 190 (295)
+.+.|+++++.|||.||+.|+++.|... +| .++|.||+|+++|++++++|+|.+.. +...|||+|+
T Consensus 264 R~G~DL~~~~~Isl~eAl~G~~~~i~tl------dg-------~i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~v~ 330 (376)
T PRK14280 264 RDGDDIYCEMPLTFAQAALGDEIEVPTL------HG-------KVKLKIPAGTQTGTQFRLKGKGVPNVRGYGQGDQYVV 330 (376)
T ss_pred EecCCEEEEEecCHHHHhCCCEEEEecC------Cc-------eEEEEECCCCCCCcEEEEcCCCCCCCCCCCCCCEEEE
Confidence 4688999999999999999998888754 45 37999999999999999999999864 3457999999
Q ss_pred EEEeCCcce
Q 022539 191 VEEKPHAVF 199 (295)
Q Consensus 191 i~v~~h~~f 199 (295)
|++..+...
T Consensus 331 ~~v~~P~~L 339 (376)
T PRK14280 331 VRVVTPTKL 339 (376)
T ss_pred EEEECCCCC
Confidence 999976543
No 90
>PRK14286 chaperone protein DnaJ; Provisional
Probab=98.57 E-value=2e-07 Score=88.17 Aligned_cols=78 Identities=17% Similarity=0.135 Sum_probs=66.0
Q ss_pred CCCCCeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCCCcCCCeEecCCCCCCCCC-CCCccEEEE
Q 022539 112 PTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQEPG-LPPADLIFV 190 (295)
Q Consensus 112 ~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDliv~ 190 (295)
+.+.|+.+.+.|+|.||+.|+++.|... +| +.++|.||+|+++|++++++|+|.+..+ ...|||+|+
T Consensus 267 R~G~DL~~~~~Isl~eAl~G~~~~i~tl------dG------~~i~v~ip~g~~~g~~~ri~G~G~P~~~~~~~GDL~V~ 334 (372)
T PRK14286 267 RQGNDLILVRKISLAQAILGAEIEVPTI------DG------KKAKMKIPEGTESGQVFRLKGHGMPYLGAYGKGDQHVI 334 (372)
T ss_pred EecCCEEEEEEECHHHHhCCCEEEEeCC------CC------CEEEEEeCCccCCCcEEEECCCCCCCCCCCCCCcEEEE
Confidence 4578999999999999999998887764 55 3689999999999999999999998643 357999999
Q ss_pred EEEeCCcceee
Q 022539 191 VEEKPHAVFQR 201 (295)
Q Consensus 191 i~v~~h~~f~r 201 (295)
|.+.-+..+..
T Consensus 335 ~~V~~P~~Ls~ 345 (372)
T PRK14286 335 VKIEIPKKITR 345 (372)
T ss_pred EEEECCCCCCH
Confidence 99997765443
No 91
>PRK14281 chaperone protein DnaJ; Provisional
Probab=98.57 E-value=2e-07 Score=88.87 Aligned_cols=74 Identities=18% Similarity=0.148 Sum_probs=63.6
Q ss_pred CCCCCeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCCCcCCCeEecCCCCCCCCC-CCCccEEEE
Q 022539 112 PTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQEPG-LPPADLIFV 190 (295)
Q Consensus 112 ~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDliv~ 190 (295)
+++.|+++++.|||.||+.|+++.|... +| .++|.||+|+++|++++++|+|.+... ...|||||+
T Consensus 283 R~G~DL~~~~~Isl~eAl~G~~~~i~tl------dg-------~i~v~ip~g~~~G~~~ri~g~G~P~~~~~~~GDL~V~ 349 (397)
T PRK14281 283 RNGDDVIYNLAVSYPDLVLGTKVEVPTL------DG-------AVKLTIPAGTQPETMLRIPGKGIGHLRGSGRGDQYVR 349 (397)
T ss_pred EecCCEEEEEEecHHHHhcCCeEEeecC------Cc-------cEEEEeCCccCCCcEEEEcCCCCCCCCCCCCCCEEEE
Confidence 5678999999999999999998888864 45 378999999999999999999998643 457999999
Q ss_pred EEEeCCcc
Q 022539 191 VEEKPHAV 198 (295)
Q Consensus 191 i~v~~h~~ 198 (295)
|+|.-+..
T Consensus 350 ~~V~~P~~ 357 (397)
T PRK14281 350 VNVFVPKE 357 (397)
T ss_pred EEEEcCCC
Confidence 99996553
No 92
>PRK14283 chaperone protein DnaJ; Provisional
Probab=98.57 E-value=3.4e-07 Score=86.75 Aligned_cols=79 Identities=16% Similarity=0.327 Sum_probs=65.5
Q ss_pred ecCCceEEEEEecHHHHhcCCEEEEecc--------C-------------------------------------------
Q 022539 201 RDGNDLVVNHKISLLEALTGLSLNLTAL--------D------------------------------------------- 229 (295)
Q Consensus 201 r~g~DL~~~~~I~l~~Al~G~~~~i~~l--------~------------------------------------------- 229 (295)
+.|.|+.+++.|||.|++.|++++|... .
T Consensus 117 ~kg~di~~~l~vsLed~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~ 196 (378)
T PRK14283 117 QRGADIYTEVEITLEEAASGVEKDIKVRHTKKCPVCNGSRAEPGSEVKTCPTCGGTGQVKQVRNTILGQMMNVTTCPDCQ 196 (378)
T ss_pred cCCCCeEEEeeeeHHHHhCCcceEEEeeeeccCCCCCccccCCCCCCccCCCcCCccEEEEEEeccCceEEEEEECCCCC
Confidence 3588999999999999999998766331 1
Q ss_pred ---------------------CcEEEEeeCCCCCCCcEEEEcCCCcCCCCCCCCCCCEEEEEEEECCCCCCH
Q 022539 230 ---------------------GRNLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMFPSRLTA 280 (295)
Q Consensus 230 ---------------------g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GDL~v~~~v~~P~~l~~ 280 (295)
..+++|.||+++++|++++++|+|+|... .+.+|||||+|+|..++.+..
T Consensus 197 G~G~~~~~~C~~C~G~g~v~~~~~l~V~IppG~~~G~~i~l~g~G~~~~~-~~~~GDLiv~i~v~~~~~f~r 267 (378)
T PRK14283 197 GEGKIVEKPCSNCHGKGVVRETKTISVKIPAGVETGSRLRVSGEGEMGDR-GGEPGDLYVVIKVKPHKIFRR 267 (378)
T ss_pred ccceecCCCCCCCCCceeeccceeEEEEECCCCCCCcEEEEeccccCCCC-CCCCccEEEEEEEEcCCCEEE
Confidence 13678899999999999999999999765 357899999999998886553
No 93
>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
Probab=98.54 E-value=2.9e-07 Score=85.69 Aligned_cols=77 Identities=16% Similarity=0.154 Sum_probs=67.1
Q ss_pred CCCCCeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCCCcCCCeEecCCCCCCC-CCCCCccEEEE
Q 022539 112 PTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQE-PGLPPADLIFV 190 (295)
Q Consensus 112 ~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~-~~~~~GDliv~ 190 (295)
+.+.||.++++|+|.+|..|.+.+|+.. .| .++|.||||++.|+.++++|+|.+. .+...|||||+
T Consensus 261 R~g~dL~~~~~Is~~~AalG~~i~vptl------~g-------~~~l~ip~Gtq~G~~~rl~gkG~p~~~~~~~GDl~v~ 327 (371)
T COG0484 261 RDGDDLYCEVPISFTEAALGGEIEVPTL------DG-------RVKLKIPAGTQTGEVFRLRGKGMPKLRSGGRGDLYVR 327 (371)
T ss_pred ECCCceEeccccCHHHHhcCCEEEEEec------CC-------CEEEecCCCCccCcEEEEcCCCccccCCCCcCCEEEE
Confidence 5678999999999999999999988876 56 3999999999999999999999986 45567999999
Q ss_pred EEEeCCcceee
Q 022539 191 VEEKPHAVFQR 201 (295)
Q Consensus 191 i~v~~h~~f~r 201 (295)
|+|.-+..+..
T Consensus 328 v~v~~P~~ls~ 338 (371)
T COG0484 328 VKVETPKNLSD 338 (371)
T ss_pred EEEEcCCCCCH
Confidence 99998776543
No 94
>PRK14297 chaperone protein DnaJ; Provisional
Probab=98.54 E-value=2.6e-07 Score=87.66 Aligned_cols=74 Identities=15% Similarity=0.079 Sum_probs=63.5
Q ss_pred CCCCCeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCCCcCCCeEecCCCCCCCC-CCCCccEEEE
Q 022539 112 PTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQEP-GLPPADLIFV 190 (295)
Q Consensus 112 ~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDliv~ 190 (295)
+.+.|+++.+.|||.||+.|+++.|... +| .++|.||+|+++|++++++|+|.+.. +...|||||+
T Consensus 269 R~G~DL~~~~~Isl~eAl~G~~~~i~~l------dg-------~~~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~v~ 335 (380)
T PRK14297 269 RKGFDIYIDKHISFAKAALGTEIKVPTV------DG-------EVKYEVPAGTQPGTVFRLKGKGVPRVNSTGRGNQYVT 335 (380)
T ss_pred EeCCCEEEEEEeCHHHHhCCCcEEEEcC------CC-------cEEEEECCCcCCCCEEEEcCCCcCCCCCCCCCcEEEE
Confidence 4588999999999999999999888774 45 37999999999999999999999864 3457999999
Q ss_pred EEEeCCcc
Q 022539 191 VEEKPHAV 198 (295)
Q Consensus 191 i~v~~h~~ 198 (295)
|+|.-+..
T Consensus 336 ~~v~~P~~ 343 (380)
T PRK14297 336 VIVDIPKK 343 (380)
T ss_pred EEEEcCCC
Confidence 99996543
No 95
>PRK14278 chaperone protein DnaJ; Provisional
Probab=98.51 E-value=4.1e-07 Score=86.24 Aligned_cols=75 Identities=17% Similarity=0.150 Sum_probs=63.5
Q ss_pred CCCCCeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCCCcCCCeEecCCCCCCCC-CCCCccEEEE
Q 022539 112 PTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQEP-GLPPADLIFV 190 (295)
Q Consensus 112 ~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDliv~ 190 (295)
+++.|+++.+.|+|.+|+.|+++.|... ++ ..++|.||+|+++|++++++|+|.+.. +...|||||+
T Consensus 260 R~G~DL~~~~~Isl~eAl~G~~~~i~tl------d~------~~i~v~ip~g~~~g~~lrl~g~G~p~~~~~~~GDL~V~ 327 (378)
T PRK14278 260 RDGDDLHCTVSVPMVDAALGTTVTVEAI------LD------GPSEITIPPGTQPGSVITLRGRGMPHLRSGGRGDLHAH 327 (378)
T ss_pred EcCCCEEEEEecCHHHHhcCCeEEEecC------CC------CeEEEEeCCCcCCCcEEEECCCCCCCCCCCCCCCEEEE
Confidence 5688999999999999999998887753 22 268999999999999999999999864 3457999999
Q ss_pred EEEeCCcc
Q 022539 191 VEEKPHAV 198 (295)
Q Consensus 191 i~v~~h~~ 198 (295)
|++.-+..
T Consensus 328 ~~V~~P~~ 335 (378)
T PRK14278 328 VEVVVPTR 335 (378)
T ss_pred EEEEcCCC
Confidence 99996543
No 96
>PRK14277 chaperone protein DnaJ; Provisional
Probab=98.46 E-value=6.2e-07 Score=85.23 Aligned_cols=74 Identities=19% Similarity=0.131 Sum_probs=62.9
Q ss_pred CCCCCeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCCCcCCCeEecCCCCCCCCC-CCCccEEEE
Q 022539 112 PTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQEPG-LPPADLIFV 190 (295)
Q Consensus 112 ~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDliv~ 190 (295)
+.+.|+++++.|||.||+.|+++.|... +| .++|.||+|+++|++++++|+|.+..+ ...|||||+
T Consensus 276 R~G~DL~~~~~Isl~eAl~G~~~~i~tl------dG-------~~~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~v~ 342 (386)
T PRK14277 276 REGYNVYLEMPITFTDAALGGEIEIPTL------DG-------KVKFTIPEGTQTGTKFRLRGKGIPHLRGRGRGDQIVK 342 (386)
T ss_pred EecCCEEEEEEcCHHHHhCCCEEEEEcC------CC-------CEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCEEEE
Confidence 4578999999999999999998888764 56 379999999999999999999998543 357999999
Q ss_pred EEEeCCcc
Q 022539 191 VEEKPHAV 198 (295)
Q Consensus 191 i~v~~h~~ 198 (295)
+.|.-+..
T Consensus 343 ~~V~~P~~ 350 (386)
T PRK14277 343 VYIEVPKK 350 (386)
T ss_pred EEEEeCCC
Confidence 99985543
No 97
>PTZ00037 DnaJ_C chaperone protein; Provisional
Probab=98.43 E-value=6.5e-07 Score=85.76 Aligned_cols=74 Identities=18% Similarity=0.099 Sum_probs=63.5
Q ss_pred CCCCCCeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCC--CcCCCeEecCCCCCCCCC--CCCcc
Q 022539 111 KPTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPG--WKKGTKITFPEKGNQEPG--LPPAD 186 (295)
Q Consensus 111 ~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G--~~~G~~i~~~g~G~~~~~--~~~GD 186 (295)
.+.|.||.+++.|||.||+.|.++.|... +|+ .++|.|||| +++|++++++|+|.+..+ ...||
T Consensus 270 ~R~G~DL~~~~~Isl~eAllG~~i~I~tL------dG~------~l~I~ip~g~vt~pg~~~~I~geGmP~~~~~~~rGD 337 (421)
T PTZ00037 270 KREGGDLFITKKISLYEALTGFVFYITHL------DGR------KLLVNTPPGEVVKPGDIKVINNEGMPTYKSPFKKGN 337 (421)
T ss_pred EEeCCeEEEEEeCCHHHHhcCCEEEeeCC------CCC------eEEEEeCCCcccCCCcEEEeCCCCcccCCCCCCCCC
Confidence 35688999999999999999998887765 663 589999999 999999999999998543 35799
Q ss_pred EEEEEEEeCC
Q 022539 187 LIFVVEEKPH 196 (295)
Q Consensus 187 liv~i~v~~h 196 (295)
|||++.|.-+
T Consensus 338 L~V~~~V~~P 347 (421)
T PTZ00037 338 LYVTFEVIFP 347 (421)
T ss_pred EEEEEEEEcC
Confidence 9999999865
No 98
>PRK14296 chaperone protein DnaJ; Provisional
Probab=98.42 E-value=8.7e-07 Score=83.78 Aligned_cols=73 Identities=16% Similarity=0.071 Sum_probs=62.5
Q ss_pred CCCeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCCCcCCCeEecCCCCCCCC--CCCCccEEEEE
Q 022539 114 PTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQEP--GLPPADLIFVV 191 (295)
Q Consensus 114 ~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~--~~~~GDliv~i 191 (295)
+.||.++++|||.||+.|+++.|... +| .++|.||+|+++|++++++|+|.+.. ....|||||++
T Consensus 273 G~DL~~~~~Isl~eAllG~~~~i~tl------dG-------~~~v~ip~~t~~g~~~ri~GkGmP~~~~~~~~GDL~V~~ 339 (372)
T PRK14296 273 NNDILMTYNISYLDAILGNEIIIKTL------DG-------DIKYKLPKSINSNELIIINNKGLYKSINKDKRGDLIIKV 339 (372)
T ss_pred CCcEEEEEecCHHHHhCCCEEEeeCC------CC-------CEEEEECCccCCCcEEEEcCCCCCcCCCCCCcCCEEEEE
Confidence 68999999999999999999888765 56 37899999999999999999998732 34579999999
Q ss_pred EEeCCcce
Q 022539 192 EEKPHAVF 199 (295)
Q Consensus 192 ~v~~h~~f 199 (295)
.|.-+...
T Consensus 340 ~V~~P~~L 347 (372)
T PRK14296 340 NIVVPKNL 347 (372)
T ss_pred EEECCCCC
Confidence 99966543
No 99
>KOG0568 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.40 E-value=1.9e-07 Score=80.42 Aligned_cols=54 Identities=33% Similarity=0.651 Sum_probs=48.6
Q ss_pred CccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhh-hcCC
Q 022539 4 DYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYD-VLSD 59 (295)
Q Consensus 4 d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~-~L~d 59 (295)
.||.+|||..+|+.+|++.||..||+++|||...+ +...+.|..|.+||. ||+.
T Consensus 48 e~fril~v~e~~~adevr~af~~lakq~hpdsgs~--~adaa~f~qideafrkvlq~ 102 (342)
T KOG0568|consen 48 ECFRILGVEEGADADEVREAFHDLAKQVHPDSGSE--EADAARFIQIDEAFRKVLQE 102 (342)
T ss_pred HHHHHhcccccCchhHHHHHHHHHHHHcCCCCCCc--cccHHHHHHHHHHHHHHHHH
Confidence 68999999999999999999999999999999865 345789999999998 7764
No 100
>KOG1789 consensus Endocytosis protein RME-8, contains DnaJ domain [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones]
Probab=98.33 E-value=4.2e-07 Score=92.44 Aligned_cols=52 Identities=35% Similarity=0.615 Sum_probs=44.3
Q ss_pred CccceecCCCC----CCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCC
Q 022539 4 DYYNILKVSRG----ATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSD 59 (295)
Q Consensus 4 d~Y~iLgv~~~----a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d 59 (295)
+-|+||.|+-+ -..+.||++|+|||.+|||||||. -.++|..+|+|||.|+.
T Consensus 1282 ~A~eiL~i~l~n~~hD~~~KirrqY~kLA~kYHPDKNPE----GRemFe~VnKAYE~L~~ 1337 (2235)
T KOG1789|consen 1282 LAREILSVDLTNEEHDKPAKIRRQYYKLAAKYHPDKNPE----GREMFERVNKAYELLSS 1337 (2235)
T ss_pred HHHHHhccccCCCCcccHHHHHHHHHHHHHHhCCCCCch----HHHHHHHHHHHHHHHHH
Confidence 56899988762 234789999999999999999985 46899999999999983
No 101
>KOG0723 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.13 E-value=4.4e-06 Score=63.54 Aligned_cols=50 Identities=28% Similarity=0.400 Sum_probs=43.6
Q ss_pred ceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCcc
Q 022539 7 NILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPR 61 (295)
Q Consensus 7 ~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~ 61 (295)
-||||+++++.+.||+|+|++....|||+..++ -.-.+||||+++|....
T Consensus 60 lIL~v~~s~~k~KikeaHrriM~~NHPD~GGSP-----YlAsKINEAKdlLe~~~ 109 (112)
T KOG0723|consen 60 LILGVTPSLDKDKIKEAHRRIMLANHPDRGGSP-----YLASKINEAKDLLEGTS 109 (112)
T ss_pred HHhCCCccccHHHHHHHHHHHHHcCCCcCCCCH-----HHHHHHHHHHHHHhccc
Confidence 389999999999999999999999999999752 45568999999997543
No 102
>KOG3192 consensus Mitochondrial J-type chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=97.12 E-value=0.00027 Score=57.64 Aligned_cols=66 Identities=30% Similarity=0.518 Sum_probs=52.8
Q ss_pred CCccceecCCC--CCCHHHHHHHHHHHHHHhCCCCCCC----CcHHHHHHHHHHHHHhhhcCCccccccccC
Q 022539 3 VDYYNILKVSR--GATEDDLKKSYKRLAMKWHPDKNPA----TNQQAEAKFKLISEAYDVLSDPRKRQIYDL 68 (295)
Q Consensus 3 ~d~Y~iLgv~~--~a~~~eIk~ayr~la~~~hPd~~~~----~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~ 68 (295)
++||.++|... ...++..+.-|.-..+++|||+... ....|.+...++|+||.+|.||-+|+.|=.
T Consensus 8 ~~ff~~Fg~e~~~~~~p~~l~~~~~~~skkL~~d~~~~~~~~~~d~a~eqSa~lnkAY~TLk~pL~RA~Yil 79 (168)
T KOG3192|consen 8 SRFFDIFGMELSFKIDPDKLKEKYTDISKKLHPDRPGLSFAGDTDQASEQSAELNKAYDTLKDPLARARYLL 79 (168)
T ss_pred HHHHHHhccccCCCCCcchhhHHHHHHHHhhCcccccccccccchhHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 57899986654 5566777778999999999999421 123578889999999999999999999864
No 103
>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=96.89 E-value=0.0025 Score=58.93 Aligned_cols=75 Identities=23% Similarity=0.228 Sum_probs=63.7
Q ss_pred CCCCCCeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCC--CcCCCeEecCCCCCCCCCCCCccEE
Q 022539 111 KPTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPG--WKKGTKITFPEKGNQEPGLPPADLI 188 (295)
Q Consensus 111 ~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G--~~~G~~i~~~g~G~~~~~~~~GDli 188 (295)
.+++.++...++++|.|+..|..+.+... +| +.+++.++|| +.+|++.+++|+|.+......||||
T Consensus 248 ~Rrg~dL~~~~~i~l~eal~G~~~~~~~l------dG------r~l~~~~~pg~vi~~~~~~~v~~~gmp~~~~~~g~ly 315 (337)
T KOG0712|consen 248 DRRGSDLYRKLTISLVEALCGFQRVWETL------DG------RLLKLSSKPGEVISPGDTKRVEGEGMPIFRNPKGDLY 315 (337)
T ss_pred eecccccceeeecchhhccccceEEEEcc------CC------ceEEEecCCCceeChhHEEeecCCCcccccCCCCcEE
Confidence 35578999999999999999977776622 56 4799999999 9999999999999998666699999
Q ss_pred EEEEEeCCc
Q 022539 189 FVVEEKPHA 197 (295)
Q Consensus 189 v~i~v~~h~ 197 (295)
|.+.|+-.+
T Consensus 316 i~~~v~fp~ 324 (337)
T KOG0712|consen 316 IKFEVKFPK 324 (337)
T ss_pred EEEEEEcCC
Confidence 999999654
No 104
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=96.49 E-value=0.0014 Score=55.42 Aligned_cols=55 Identities=35% Similarity=0.558 Sum_probs=46.7
Q ss_pred CCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCC--c----HHHHHHHHHHHHHhhhc
Q 022539 3 VDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPAT--N----QQAEAKFKLISEAYDVL 57 (295)
Q Consensus 3 ~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~--~----~~~~~~f~~i~~Ay~~L 57 (295)
.+.|.+|+++..++..+|+++|+++..++|||+-... . ..+.+++++|++||+.+
T Consensus 113 ~~~l~~l~~~~~~~~~~i~~~~r~l~~e~~~d~a~~~~~~~e~~~~~~~~~~~i~~a~~~~ 173 (174)
T COG1076 113 EDALKVLGVEIKADQDAIKKAYRKLLSEQHPDKAAAKGLKLEFIEKLKEKLQEIQEAYEDI 173 (174)
T ss_pred hhHHHHhcCchhhhHHHHHHHHHHHHHhcCHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhc
Confidence 4789999999999999999999999999999984321 1 35888999999999853
No 105
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=95.75 E-value=0.0042 Score=52.55 Aligned_cols=65 Identities=29% Similarity=0.451 Sum_probs=51.7
Q ss_pred CccceecCCCCCC--HHHHHHHHHHHHHHhCCCCCCCCcH----HHHHHHHHHHHHhhhcCCccccccccC
Q 022539 4 DYYNILKVSRGAT--EDDLKKSYKRLAMKWHPDKNPATNQ----QAEAKFKLISEAYDVLSDPRKRQIYDL 68 (295)
Q Consensus 4 d~Y~iLgv~~~a~--~~eIk~ayr~la~~~hPd~~~~~~~----~~~~~f~~i~~Ay~~L~d~~~r~~yd~ 68 (295)
||....+.++.+. .+..+..|+.+++.+|||+...... .+.+.+..++.||.+|.+|-+|+.|=.
T Consensus 2 ~~~~~~~~~~~f~~~~~~l~~~~~~~~~~~~~dr~~~~~~~~~~~~l~~~~~~~~a~~tLk~~l~ra~~~l 72 (174)
T COG1076 2 DGFVLFGLPRAFQIDLDALKLQYRELQRAYHPDRFGKASEAEQRKALQQSAEVNPAYQTLKDPLLRAEYLL 72 (174)
T ss_pred CcccccccHHHHHHHHhHhhhhHHHHHHhhCcccccccchHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 5666667777554 3578999999999999999854322 255689999999999999999999875
No 106
>KOG0431 consensus Auxilin-like protein and related proteins containing DnaJ domain [General function prediction only]
Probab=95.12 E-value=0.024 Score=55.08 Aligned_cols=44 Identities=32% Similarity=0.442 Sum_probs=32.3
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCC--cH----HHHHHHHHHHHHhhh
Q 022539 13 RGATEDDLKKSYKRLAMKWHPDKNPAT--NQ----QAEAKFKLISEAYDV 56 (295)
Q Consensus 13 ~~a~~~eIk~ayr~la~~~hPd~~~~~--~~----~~~~~f~~i~~Ay~~ 56 (295)
.=.+.++|||||||..+..||||-+.. .. .+++.|..+++|+..
T Consensus 398 DLVtp~~VKKaYrKA~L~VHPDKlqq~gas~~qK~Iaekvfd~l~eawn~ 447 (453)
T KOG0431|consen 398 DLVTPAQVKKAYRKAVLCVHPDKLQQKGASLEQKYIAEKVFDALSEAWNK 447 (453)
T ss_pred hccCHHHHHHHHHhhhheeCcccccCCcccHHHHHHHHHHHHHHHHHHHh
Confidence 345889999999999999999997543 11 255666666666654
No 107
>PF03656 Pam16: Pam16; InterPro: IPR005341 The Pam16 protein is the fifth essential subunit of the pre-sequence translocase-associated protein import motor (PAM) []. In Saccharomyces cerevisiae (Baker's yeast), Pam16 is required for preprotein translocation into the matrix, but not for protein insertion into the inner membrane [].; PDB: 2GUZ_J.
Probab=93.51 E-value=0.13 Score=41.19 Aligned_cols=51 Identities=22% Similarity=0.231 Sum_probs=37.0
Q ss_pred cceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCcc
Q 022539 6 YNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPR 61 (295)
Q Consensus 6 Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~ 61 (295)
..||+|++.++.++|.+.|.+|-...+|++..+ .-.-.+|..|.|.|..+.
T Consensus 61 ~~ILnv~~~~~~eeI~k~y~~Lf~~Nd~~kGGS-----fYLQSKV~rAKErl~~El 111 (127)
T PF03656_consen 61 RQILNVKEELSREEIQKRYKHLFKANDPSKGGS-----FYLQSKVFRAKERLEQEL 111 (127)
T ss_dssp HHHHT--G--SHHHHHHHHHHHHHHT-CCCTS------HHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCCCccCHHHHHHHHHHHHhccCCCcCCC-----HHHHHHHHHHHHHHHHHH
Confidence 368999999999999999999999999998753 455567888888876543
No 108
>PF13446 RPT: A repeated domain in UCH-protein
Probab=88.69 E-value=0.89 Score=31.34 Aligned_cols=25 Identities=16% Similarity=0.336 Sum_probs=23.1
Q ss_pred ccceecCCCCCCHHHHHHHHHHHHH
Q 022539 5 YYNILKVSRGATEDDLKKSYKRLAM 29 (295)
Q Consensus 5 ~Y~iLgv~~~a~~~eIk~ayr~la~ 29 (295)
-|+.|||+++++.+.|-.+|+....
T Consensus 7 Ay~~Lgi~~~~~Dd~Ii~~f~~~~~ 31 (62)
T PF13446_consen 7 AYEILGIDEDTDDDFIISAFQSKVN 31 (62)
T ss_pred HHHHhCcCCCCCHHHHHHHHHHHHH
Confidence 4899999999999999999999876
No 109
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=86.58 E-value=0.98 Score=38.89 Aligned_cols=40 Identities=28% Similarity=0.422 Sum_probs=31.0
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhh-cCCc
Q 022539 12 SRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDV-LSDP 60 (295)
Q Consensus 12 ~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~-L~d~ 60 (295)
+++||.+||.+|+.++..+|--| ++.-..|..||+. |++.
T Consensus 1 S~~ASfeEIq~Arn~ll~~y~gd---------~~~~~~IEaAYD~ILM~r 41 (194)
T PF11833_consen 1 SEDASFEEIQAARNRLLAQYAGD---------EKSREAIEAAYDAILMER 41 (194)
T ss_pred CCCCCHHHHHHHHHHHHHHhcCC---------HHHHHHHHHHHHHHHHHH
Confidence 57999999999999999988222 3556679999995 4443
No 110
>KOG0724 consensus Zuotin and related molecular chaperones (DnaJ superfamily), contains DNA-binding domains [Posttranslational modification, protein turnover, chaperones]
Probab=86.52 E-value=0.61 Score=43.42 Aligned_cols=55 Identities=35% Similarity=0.523 Sum_probs=43.4
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCCCC---CcHHHHHHHHHHHHHhhhcCCccccccccC
Q 022539 14 GATEDDLKKSYKRLAMKWHPDKNPA---TNQQAEAKFKLISEAYDVLSDPRKRQIYDL 68 (295)
Q Consensus 14 ~a~~~eIk~ayr~la~~~hPd~~~~---~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~ 68 (295)
-++..+|+.+|+..++..||++-.. .....++.|++|.+||++|++..+|..+|.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~ka~~i~~~~~~~~t~~~ 60 (335)
T KOG0724|consen 3 LASEDELRLAYREMALKSHPEKKSFYEKLSLWTEEEFKKIEKALAILDDDEPRRTPDS 60 (335)
T ss_pred cccHHHHHHHHHHHhhhcCcHHHHHHHHhhhhHHHHHHHHHHHHHHHhccccccchhh
Confidence 3678899999999999999998741 112467889999999999998666555554
No 111
>COG5552 Uncharacterized conserved protein [Function unknown]
Probab=78.26 E-value=7.6 Score=27.85 Aligned_cols=37 Identities=14% Similarity=0.198 Sum_probs=30.4
Q ss_pred CCCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCC
Q 022539 1 MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNP 37 (295)
Q Consensus 1 m~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~ 37 (295)
|-++.-++.++++-|++.||+.|-++..+|..=-..|
T Consensus 1 MCRNIk~LfnfdPPAT~~EvrdAAlQfVRKlSGtT~P 37 (88)
T COG5552 1 MCRNIKELFNFDPPATPVEVRDAALQFVRKLSGTTHP 37 (88)
T ss_pred CccchHHHhCCCCCCCcHHHHHHHHHHHHHhcCCCCc
Confidence 6677778899999999999999998888887544444
No 112
>PF14687 DUF4460: Domain of unknown function (DUF4460)
Probab=73.10 E-value=6 Score=30.94 Aligned_cols=48 Identities=25% Similarity=0.367 Sum_probs=35.3
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCC---CcHHHHHHHHHHHHHhhhcCCc
Q 022539 13 RGATEDDLKKSYKRLAMKWHPDKNPA---TNQQAEAKFKLISEAYDVLSDP 60 (295)
Q Consensus 13 ~~a~~~eIk~ayr~la~~~hPd~~~~---~~~~~~~~f~~i~~Ay~~L~d~ 60 (295)
+..+..+++.|.|.+-++.|||...+ .+...++-++.++.-.+.|..+
T Consensus 4 r~~~~~~l~~aLr~Fy~~VHPDlF~~~P~~k~~Ne~SLk~Ln~~Ld~l~~~ 54 (112)
T PF14687_consen 4 RNLSSPDLRSALRPFYFAVHPDLFGQHPEEKQVNEESLKLLNSYLDSLKKR 54 (112)
T ss_pred hhhhhHHHHHHHHHHHHHhCCcccccChHHHHhhHHHHHHHHHHHHHHhcc
Confidence 45677899999999999999997532 2234556678888777777653
No 113
>PF10041 DUF2277: Uncharacterized conserved protein (DUF2277); InterPro: IPR018735 Members of this family of hypothetical bacterial proteins have no known function.
Probab=59.87 E-value=47 Score=24.00 Aligned_cols=57 Identities=16% Similarity=0.196 Sum_probs=39.3
Q ss_pred CCCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHH----HHHHHHhhhcCC
Q 022539 1 MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKF----KLISEAYDVLSD 59 (295)
Q Consensus 1 m~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f----~~i~~Ay~~L~d 59 (295)
|=+|--.+-++.+.|+.+||..|-.+..+|..=-..|+. ...+.| .+|..|-.-|.|
T Consensus 1 MCRnI~~L~~fePpaT~~EI~aAAlQyVRKvSG~~~Ps~--an~eaF~~AV~eva~at~~LL~ 61 (78)
T PF10041_consen 1 MCRNIKTLRNFEPPATDEEIRAAALQYVRKVSGFRKPSA--ANAEAFDRAVAEVAAATRRLLD 61 (78)
T ss_pred CCcchhhhcCCCCCCCHHHHHHHHHHHHHHHccCCCcch--hhHHHHHHHHHHHHHHHHHHHH
Confidence 556666778999999999999999999998866655542 223334 445555544443
No 114
>PF12991 DUF3875: Domain of unknown function, B. Theta Gene description (DUF3875); InterPro: IPR024451 This domain of unknown function is found in proteins from Bacteroidetes, including the conjugation system ATPase, TraG.
Probab=58.07 E-value=13 Score=25.02 Aligned_cols=25 Identities=20% Similarity=0.543 Sum_probs=19.4
Q ss_pred CCCCEEEEEEEECCCC--CCHHHHHHH
Q 022539 262 KKGNLIIKFDIMFPSR--LTAEQKSDL 286 (295)
Q Consensus 262 ~~GDL~v~~~v~~P~~--l~~~~~~~l 286 (295)
+.||+.|-|+|.+|+- +|.++-+.+
T Consensus 26 k~gDiTv~f~v~LPEiFtls~~eYea~ 52 (54)
T PF12991_consen 26 KNGDITVAFRVELPEIFTLSEAEYEAI 52 (54)
T ss_pred cCCCEEEEEEecCCeeEEechhHhHHh
Confidence 5799999999999995 555555443
No 115
>TIGR02642 phage_xxxx uncharacterized phage protein. This uncharacterized protein is found in prophage regions of Shewanella oneidensis MR-1, Vibrio vulnificus YJ016, Yersinia pseudotuberculosis IP 32953, and Aeromonas hydrophila ATCC7966. It appears to have regions of sequence similarity to phage lambda antitermination protein Q.
Probab=58.00 E-value=12 Score=32.01 Aligned_cols=44 Identities=11% Similarity=0.014 Sum_probs=29.6
Q ss_pred hcCceeEEEE--eEEeeCCCCcEEEEEEEEEEEeCCCCcCCCeEecCC
Q 022539 129 YKGARKKMKI--SRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPE 174 (295)
Q Consensus 129 ~~G~~k~i~~--~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g 174 (295)
|.|.-+.+.- .+..|+|+| .+..+....+.+ .|+.+|++|++.-
T Consensus 105 C~G~G~~i~~~~~C~~C~G~G-~v~~~~~~~~k~-~g~~~g~~it~~~ 150 (186)
T TIGR02642 105 CRGTGLIQRRQRECDTCAGTG-RFRPTVEDLLKS-FGVDSGAAIVLKD 150 (186)
T ss_pred CCCeeEEecCCCCCCCCCCcc-EEeeeEEEEEEe-eeccCCceeeHHH
Confidence 4454444442 234445666 566777888999 9999999999853
No 116
>PF07709 SRR: Seven Residue Repeat; InterPro: IPR011714 This repeat is found in some Plasmodium and Theileria proteins.
Probab=56.89 E-value=6.5 Score=18.77 Aligned_cols=13 Identities=46% Similarity=0.795 Sum_probs=10.1
Q ss_pred HHHHHHHHhhhcC
Q 022539 46 KFKLISEAYDVLS 58 (295)
Q Consensus 46 ~f~~i~~Ay~~L~ 58 (295)
.|..+..||+.|+
T Consensus 2 ~~~~V~~aY~~l~ 14 (14)
T PF07709_consen 2 KFEKVKNAYEQLS 14 (14)
T ss_pred cHHHHHHHHHhcC
Confidence 5778888888774
No 117
>PRK14051 negative regulator GrlR; Provisional
Probab=49.01 E-value=85 Score=24.30 Aligned_cols=71 Identities=21% Similarity=0.173 Sum_probs=45.7
Q ss_pred CccEEEEEEEeCCcceeecCCceEEEEEec--HHHHhcCCEEEEeccCCcEEEEeeCCCCCCCcEEEEcCCCcCC
Q 022539 184 PADLIFVVEEKPHAVFQRDGNDLVVNHKIS--LLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGMPI 256 (295)
Q Consensus 184 ~GDliv~i~v~~h~~f~r~g~DL~~~~~I~--l~~Al~G~~~~i~~l~g~~i~v~i~~~~~~g~~~rl~g~G~p~ 256 (295)
..|++++++-..|..-+.-+.+-.+.+.|+ +.+.-.|+++.-..-+.+++.|.+.+ +-=..+.|++-|||.
T Consensus 47 d~~iilhvhR~n~ei~SVf~~eqdy~L~i~kk~~sn~~~~~l~~HV~~Nekl~vdv~a--kFI~~LvI~~~~~~~ 119 (123)
T PRK14051 47 DEDIILHVHRYNYEIPSVLNIEQDYQLVIPKKVLSNDNNLTLHCHVRGNEKLFVDVYA--KFIEPLVIKNTGMPQ 119 (123)
T ss_pred cceeEEEEEecccccccccCccccEEEecchhheeCCCCeEEEEEEcCCcEEEEEEee--eeeeeeEEccCCCcc
Confidence 367788887777766665555556677777 44544455555555566666666543 333458899999984
No 118
>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=48.90 E-value=68 Score=26.72 Aligned_cols=71 Identities=18% Similarity=0.122 Sum_probs=59.8
Q ss_pred ceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCCCCCCcEEEEcCCCcCCCCCCCCCCCEEEEEEEECCCCC
Q 022539 205 DLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMFPSRL 278 (295)
Q Consensus 205 DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GDL~v~~~v~~P~~l 278 (295)
++.....++..++..+....+.-.......+.++.+...+..+++.+++.... +..++.+.++.+......
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 220 (237)
T COG2214 150 DLAANLADNFEEALAGVKKAVARLLGKALKSTIKAGALEGKALRLKGLLKSAR---GALGKARLKELSKRHPPF 220 (237)
T ss_pred ceeeeeeccHHHHhcCcceeeeccccccccccCCcccccCceeeecccCCcCC---CCcccceeeeeccCCCCc
Confidence 78888999999999999888888777655578999999999999999998755 467999999988865543
No 119
>PF12434 Malate_DH: Malate dehydrogenase enzyme
Probab=47.02 E-value=23 Score=20.25 Aligned_cols=17 Identities=18% Similarity=0.550 Sum_probs=14.5
Q ss_pred HHHHHHHHHHHHHHhCC
Q 022539 17 EDDLKKSYKRLAMKWHP 33 (295)
Q Consensus 17 ~~eIk~ayr~la~~~hP 33 (295)
.++.+.+-|+.|+.||-
T Consensus 10 ~~~~r~~lR~AALeYHe 26 (28)
T PF12434_consen 10 KEDKRAQLRQAALEYHE 26 (28)
T ss_pred hHHHHHHHHHHHHHhcc
Confidence 36788999999999994
No 120
>PF09285 Elong-fact-P_C: Elongation factor P, C-terminal; InterPro: IPR015365 These nucleic acid binding domains are predominantly found in elongation factor P, where they adopt an OB-fold, with five beta-strands forming a beta-barrel in a Greek-key topology []. ; GO: 0043043 peptide biosynthetic process, 0005737 cytoplasm; PDB: 1YBY_A 3OYY_B 1UEB_B 3HUW_V 3HUY_V 3A5Z_H.
Probab=44.27 E-value=35 Score=23.19 Aligned_cols=20 Identities=20% Similarity=0.275 Sum_probs=14.0
Q ss_pred EEEEeCCCCcCCCeEecCCC
Q 022539 156 LKIDIKPGWKKGTKITFPEK 175 (295)
Q Consensus 156 l~V~Ip~G~~~G~~i~~~g~ 175 (295)
+.|.+|+-++.|++|++.-.
T Consensus 30 ~~i~VP~FI~~Gd~I~VdT~ 49 (56)
T PF09285_consen 30 AEIQVPLFIEEGDKIKVDTR 49 (56)
T ss_dssp -EEEEETT--TT-EEEEETT
T ss_pred CEEEccceecCCCEEEEECC
Confidence 78999999999999998653
No 121
>smart00841 Elong-fact-P_C Elongation factor P, C-terminal. These nucleic acid binding domains are predominantly found in elongation factor P, where they adopt an OB-fold, with five beta-strands forming a beta-barrel in a Greek-key topology PUBMED:15210970.
Probab=42.05 E-value=29 Score=23.60 Aligned_cols=20 Identities=15% Similarity=0.205 Sum_probs=17.6
Q ss_pred EEEEeCCCCcCCCeEecCCC
Q 022539 156 LKIDIKPGWKKGTKITFPEK 175 (295)
Q Consensus 156 l~V~Ip~G~~~G~~i~~~g~ 175 (295)
++|.+|.-++.|++|++.-.
T Consensus 30 ~~i~VP~FI~~Gd~I~V~T~ 49 (56)
T smart00841 30 AVVQVPLFINEGDKIKVDTR 49 (56)
T ss_pred CEEEcCCcccCCCEEEEECC
Confidence 78999999999999988653
No 122
>cd02639 R3H_RRM R3H domain of mainly fungal proteins which are associated with a RNA recognition motif (RRM) domain. Present in this group is the RNA-binding post-transcriptional regulator Cip2 (Csx1-interacting protein 2) involved in counteracting Csx1 function. Csx1 plays a central role in controlling gene expression during oxidative stress. The name of the R3H domain comes from the characteristic spacing of the most conserved arginine and histidine residues. The function of the domain is predicted to bind ssDNA or ssRNA in a sequence-specific manner.
Probab=39.61 E-value=39 Score=23.22 Aligned_cols=22 Identities=18% Similarity=0.359 Sum_probs=18.5
Q ss_pred EEEEECCCCCCHHHHHHHHHHh
Q 022539 269 KFDIMFPSRLTAEQKSDLKRAL 290 (295)
Q Consensus 269 ~~~v~~P~~l~~~~~~~l~~~l 290 (295)
..+.+||..||+.+|..+..+-
T Consensus 17 ~~eL~Fp~~ls~~eRriih~la 38 (60)
T cd02639 17 RDELAFPSSLSPAERRIVHLLA 38 (60)
T ss_pred ceEEEcCCCCCHHHHHHHHHHH
Confidence 5678999999999999887653
No 123
>cd05794 S1_EF-P_repeat_2 S1_EF-P_repeat_2: Translation elongation factor P (EF-P), S1-like RNA-binding domain, repeat 1. EF-P stimulates the peptidyltransferase activity in the prokaryotic 70S ribosome. EF-P enhances the synthesis of certain dipeptides with N-formylmethionyl-tRNA and puromycine in vitro. EF-P binds to both the 30S and 50S ribosomal subunits. EF-P binds near the streptomycine binding site of the 16S rRNA in the 30S subunit. EF-P interacts with domains 2 and 5 of the 23S rRNA. The L16 ribosomal protein of the 50S or its N-terminal fragment are required for EF-P mediated peptide bond synthesis, whereas L11, L15, and L7/L12 are not required in this reaction, suggesting that EF-P may function at a different ribosomal site than most other translation factors. EF-P is essential for cell viability and is required for protein synthesis. EF-P is mainly present in bacteria. The EF-P homologs in archaea and eukaryotes are the initiation factors aIF5A and eIF5A, respectively. EF-P
Probab=38.04 E-value=36 Score=23.10 Aligned_cols=20 Identities=20% Similarity=0.292 Sum_probs=17.8
Q ss_pred EEEEeCCCCcCCCeEecCCC
Q 022539 156 LKIDIKPGWKKGTKITFPEK 175 (295)
Q Consensus 156 l~V~Ip~G~~~G~~i~~~g~ 175 (295)
+.|.+|.-+..|++|++.-.
T Consensus 30 ~~i~VP~FI~~Gd~I~V~T~ 49 (56)
T cd05794 30 AEVQVPLFIKEGEKIKVDTR 49 (56)
T ss_pred CEEEcCCeecCCCEEEEECC
Confidence 78999999999999998654
No 124
>PF07739 TipAS: TipAS antibiotic-recognition domain; InterPro: IPR012925 TipAL is a bacterial transcriptional regulator of the MerR family. The tipA gene can be expressed as a long form, TipAL, and a short form, TipAS, which constitutes the C-terminal part of TipAL. TipAS forms the antibiotic-recognition domain []. This domain, which has an alpha-helical globin-like fold, is also found at the C terminus of other MerR family transcription factors, including Mta, a central regulator of multidrug resistance in Bacillus subtilis [], and SkgA from Caulobacter crescentus []. ; GO: 0003677 DNA binding, 0045892 negative regulation of transcription, DNA-dependent; PDB: 1NY9_A 3HH0_A 3QAO_A.
Probab=35.95 E-value=37 Score=25.89 Aligned_cols=52 Identities=23% Similarity=0.503 Sum_probs=33.7
Q ss_pred cCCCCCCH-HHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCcccccccc-CCCC
Q 022539 10 KVSRGATE-DDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYD-LYGP 71 (295)
Q Consensus 10 gv~~~a~~-~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd-~~g~ 71 (295)
|+++++.. .++-+.++.++..+++ . ..+.+..+.+.| +.||.-+..|| .++.
T Consensus 51 g~~p~s~evq~l~~~~~~~~~~~~~-~-------~~~~~~~l~~~y--~~~~~~~~~~~~~~~~ 104 (118)
T PF07739_consen 51 GVDPDSPEVQELAERWMELINQFTG-G-------DPELLRGLAQMY--VEDPRFAAMYDKKFGP 104 (118)
T ss_dssp T--TT-HHHHHHHHHHHHHHHHSS-----------HHHHHHHHHHT--TSTHHHHHHHG-GGST
T ss_pred CCCcCCHHHHHHHHHHHHHHHHHhC-C-------CHHHHHHHHHHH--HcCHHHHhhccccCCH
Confidence 55565444 5677777777777766 1 246888888888 78888888888 5554
No 125
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=35.63 E-value=39 Score=30.41 Aligned_cols=31 Identities=32% Similarity=0.419 Sum_probs=25.0
Q ss_pred EEEecHHHHhcC-CEEEEeccCCcEEEEeeCC
Q 022539 209 NHKISLLEALTG-LSLNLTALDGRNLTLPVTD 239 (295)
Q Consensus 209 ~~~I~l~~Al~G-~~~~i~~l~g~~i~v~i~~ 239 (295)
+++|-|+||+.| |..+|++.|+..=.+.|.+
T Consensus 19 DhTIRfWqa~tG~C~rTiqh~dsqVNrLeiTp 50 (311)
T KOG0315|consen 19 DHTIRFWQALTGICSRTIQHPDSQVNRLEITP 50 (311)
T ss_pred cceeeeeehhcCeEEEEEecCccceeeEEEcC
Confidence 358999999999 6999999999755566643
No 126
>PF12791 RsgI_N: Anti-sigma factor N-terminus; InterPro: IPR024449 The heat shock genes in Bacillus subtilis can be classified into several groups according to their regulation [], and the sigma gene, sigI, of Bacillus subtilis belongs to the group IV heat-shock response genes and has many orthologues in the bacterial phylum Firmicutes []. Regulation of sigma factor I is carried out by RsgI from the same operon. This entry represents the N-terminal cytoplasmic portion of RsgI ('upstream' of the single transmembrane helix) which has been shown to interact directly with Sigma-I [].
Probab=34.55 E-value=1e+02 Score=20.37 Aligned_cols=37 Identities=11% Similarity=0.117 Sum_probs=29.6
Q ss_pred cCCEEEEeccCCcEEEEeeCCCCCCCcEEEEcCCCcC
Q 022539 219 TGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGMP 255 (295)
Q Consensus 219 ~G~~~~i~~l~g~~i~v~i~~~~~~g~~~rl~g~G~p 255 (295)
.+....|-|.||+-++|+.++..+-|+.+.+.-.-..
T Consensus 4 ~~~~aiVlT~dGeF~~ik~~~~~~vG~eI~~~~~~~~ 40 (56)
T PF12791_consen 4 KKKYAIVLTPDGEFIKIKRKPGMEVGQEIEFDEKDII 40 (56)
T ss_pred cCCEEEEEcCCCcEEEEeCCCCCcccCEEEEechhhc
Confidence 3556788899999899999888999999988765443
No 127
>PF06675 DUF1177: Protein of unknown function (DUF1177); InterPro: IPR009561 This family consists of several hypothetical archaeal and bacterial proteins of around 300 residues in length. The function of this family is unknown.
Probab=34.07 E-value=1.2e+02 Score=27.19 Aligned_cols=89 Identities=13% Similarity=0.260 Sum_probs=54.8
Q ss_pred CCccEEEEEEEeCCcceeecCCceEEEEEecHHHHhc-------CCEEEEeccCCcEEE----EeeCCCCCCCcEEEEcC
Q 022539 183 PPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALT-------GLSLNLTALDGRNLT----LPVTDIIQPGSEVVIPN 251 (295)
Q Consensus 183 ~~GDliv~i~v~~h~~f~r~g~DL~~~~~I~l~~Al~-------G~~~~i~~l~g~~i~----v~i~~~~~~g~~~rl~g 251 (295)
.+||++|.-++.||.--+.-.-==++.-+|++.++.. ..-.+|.|-.|..+- +.|.+.++.|+++|+..
T Consensus 79 L~GDVii~ThIcp~Apt~PH~PvpFM~sPv~~~~~n~~EV~p~mdAILSiDTTKGNRiin~~GfAisPtvKeGyILrvse 158 (276)
T PF06675_consen 79 LPGDVIITTHICPDAPTRPHDPVPFMGSPVDMATMNRHEVDPEMDAILSIDTTKGNRIINHRGFAISPTVKEGYILRVSE 158 (276)
T ss_pred cCCcEEEEEecCCCCCCCCCCCcccccCccCHHHHHHhhcCcccceEEEEecCCCceeeccCCeEecccccceEEEEcCH
Confidence 4799999999998754333222223455666666553 234788888775432 45788999999999975
Q ss_pred CCcCCCCCCCCCCCEEEEEEEE
Q 022539 252 EGMPISKDPSKKGNLIIKFDIM 273 (295)
Q Consensus 252 ~G~p~~~~~~~~GDL~v~~~v~ 273 (295)
.=+.... ...|.+-+.|-+.
T Consensus 159 dLl~im~--~~TG~~~~~~PlT 178 (276)
T PF06675_consen 159 DLLDIME--RVTGKLPVTFPLT 178 (276)
T ss_pred HHHHHHH--hhcCCCceEEecc
Confidence 4332222 2345555555444
No 128
>COG2879 Uncharacterized small protein [Function unknown]
Probab=31.77 E-value=80 Score=21.98 Aligned_cols=27 Identities=41% Similarity=0.508 Sum_probs=18.1
Q ss_pred HHHHHHHhCCCCCCCCcHHHHHHHHHHHHH
Q 022539 24 YKRLAMKWHPDKNPATNQQAEAKFKLISEA 53 (295)
Q Consensus 24 yr~la~~~hPd~~~~~~~~~~~~f~~i~~A 53 (295)
|-.-.++.|||+.+-. -.|.|++-++|
T Consensus 28 YVehmr~~hPd~p~mT---~~EFfrec~da 54 (65)
T COG2879 28 YVEHMRKKHPDKPPMT---YEEFFRECQDA 54 (65)
T ss_pred HHHHHHHhCcCCCccc---HHHHHHHHHHh
Confidence 4445688999999753 35677766554
No 129
>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=30.67 E-value=59 Score=29.74 Aligned_cols=39 Identities=5% Similarity=0.230 Sum_probs=32.7
Q ss_pred EEEEeeCCCCCCCcEEEEcCCCcCCCCCCCCCCCEEEEEEEECCCCCC
Q 022539 232 NLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMFPSRLT 279 (295)
Q Consensus 232 ~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GDL~v~~~v~~P~~l~ 279 (295)
.+.|.+|+++.++.++++++.|-- ||+|.+.|.--..+.
T Consensus 234 ~i~i~~~~g~~~~~~l~~~~~~~~---------~l~v~~~v~~~~~~~ 272 (288)
T KOG0715|consen 234 DIMIVLPAGVRSADTLRFAGHGND---------DLFVRLIVAKSPSFR 272 (288)
T ss_pred eEEeecCcccccccEEEEecCCcc---------eEEEEEEeccCcccc
Confidence 578899999999999999988642 999999998765555
No 130
>PF02736 Myosin_N: Myosin N-terminal SH3-like domain; InterPro: IPR004009 This domain has an SH3-like fold. It is found at the N terminus of many but not all myosins. The function of this domain is unknown.; GO: 0003774 motor activity, 0005524 ATP binding, 0016459 myosin complex; PDB: 2EC6_A 2W4H_M 1O1E_P 1O1D_D 1O18_A 1O1C_P 1O1B_D 1O1F_A 2W4A_M 2W4G_M ....
Probab=27.30 E-value=1.4e+02 Score=18.68 Aligned_cols=34 Identities=21% Similarity=0.279 Sum_probs=23.2
Q ss_pred eecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEe
Q 022539 200 QRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLP 236 (295)
Q Consensus 200 ~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~ 236 (295)
-.+..+-+....|. ...|..+.|.+.+|++++|+
T Consensus 6 vpD~~egfv~g~I~---~~~g~~vtV~~~~G~~~tv~ 39 (42)
T PF02736_consen 6 VPDPKEGFVKGEII---EEEGDKVTVKTEDGKEVTVK 39 (42)
T ss_dssp EEESSSSEEEEEEE---EEESSEEEEEETTTEEEEEE
T ss_pred EeCCcccEEEEEEE---EEcCCEEEEEECCCCEEEeC
Confidence 34444555566665 56788999999999866654
No 131
>KOG3442 consensus Uncharacterized conserved protein [Function unknown]
Probab=25.72 E-value=94 Score=24.74 Aligned_cols=31 Identities=23% Similarity=0.326 Sum_probs=27.0
Q ss_pred ceecCCCCCCHHHHHHHHHHHHHHhCCCCCC
Q 022539 7 NILKVSRGATEDDLKKSYKRLAMKWHPDKNP 37 (295)
Q Consensus 7 ~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~ 37 (295)
.||+|+...+.+||-+.|..|=....+.+..
T Consensus 63 qILnV~~~ln~eei~k~yehLFevNdkskGG 93 (132)
T KOG3442|consen 63 QILNVKEPLNREEIEKRYEHLFEVNDKSKGG 93 (132)
T ss_pred hHhCCCCCCCHHHHHHHHHHHHhccCcccCc
Confidence 5899999999999999999998877776654
No 132
>cd01388 SOX-TCF_HMG-box SOX-TCF_HMG-box, class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and vertebrates, and transcription factor-like proteins, TCF-1, -3, -4, and LEF-1. They appear to bind the minor groove of the A/T C A A A G/C-motif.
Probab=23.40 E-value=89 Score=21.72 Aligned_cols=41 Identities=24% Similarity=0.368 Sum_probs=29.6
Q ss_pred HHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccC
Q 022539 22 KSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDL 68 (295)
Q Consensus 22 ~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~ 68 (295)
+..|...++-||+.. ..+..+.|.+.|..|++.++...++.
T Consensus 14 ~~~r~~~~~~~p~~~------~~eisk~l~~~Wk~ls~~eK~~y~~~ 54 (72)
T cd01388 14 KRHRRKVLQEYPLKE------NRAISKILGDRWKALSNEEKQPYYEE 54 (72)
T ss_pred HHHHHHHHHHCCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 445566667789864 35788889999999998877655443
No 133
>COG5435 Uncharacterized conserved protein [Function unknown]
Probab=22.90 E-value=1.4e+02 Score=24.52 Aligned_cols=31 Identities=19% Similarity=0.491 Sum_probs=28.7
Q ss_pred CCCCEEEEEEEECCCCCCHHHHHHHHHHhCC
Q 022539 262 KKGNLIIKFDIMFPSRLTAEQKSDLKRALGG 292 (295)
Q Consensus 262 ~~GDL~v~~~v~~P~~l~~~~~~~l~~~l~~ 292 (295)
.+|+-.+.|-..-|..++++|+.++.+++.+
T Consensus 108 ~~g~~vLifT~Tt~~~ftp~q~~~~~~~I~S 138 (147)
T COG5435 108 ERGDTVLIFTLTTPGEFTPSQKKAWEQVIQS 138 (147)
T ss_pred ccCCeEEEEEecCCCCCCHHHHHHHHHHHHh
Confidence 6899999999999999999999999998864
No 134
>cd00084 HMG-box High Mobility Group (HMG)-box is found in a variety of eukaryotic chromosomal proteins and transcription factors. HMGs bind to the minor groove of DNA and have been classified by DNA binding preferences. Two phylogenically distinct groups of Class I proteins bind DNA in a sequence specific fashion and contain a single HMG box. One group (SOX-TCF) includes transcription factors, TCF-1, -3, -4; and also SRY and LEF-1, which bind four-way DNA junctions and duplex DNA targets. The second group (MATA) includes fungal mating type gene products MC, MATA1 and Ste11. Class II and III proteins (HMGB-UBF) bind DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal proteins, HMG1 and HMG2, which bind to bent or distorted DNA such as four-way DNA junctions, synthetic DNA cruciforms, kinked cisplatin-modified DNA, DNA bulges, cross-overs in supercoiled DNA, and can cause looping of linear DNA. Class III member
Probab=22.80 E-value=98 Score=20.45 Aligned_cols=41 Identities=15% Similarity=0.215 Sum_probs=29.5
Q ss_pred HHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCcccccccc
Q 022539 21 KKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYD 67 (295)
Q Consensus 21 k~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd 67 (295)
.+.++...+.-||+.+ ..+..+.+.+.|..|++..+....+
T Consensus 12 ~~~~~~~~~~~~~~~~------~~~i~~~~~~~W~~l~~~~k~~y~~ 52 (66)
T cd00084 12 SQEHRAEVKAENPGLS------VGEISKILGEMWKSLSEEEKKKYEE 52 (66)
T ss_pred HHHHHHHHHHHCcCCC------HHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 4556677777888855 3578888999999999866654443
No 135
>cd06007 R3H_DEXH_helicase R3H domain of a group of proteins which also contain a DEXH-box helicase domain, and may function as ATP-dependent DNA or RNA helicases. The name of the R3H domain comes from the characteristic spacing of the most conserved arginine and histidine residues. The function of the domain is predicted to bind ssDNA or ssRNA in a sequence-specific manner.
Probab=22.21 E-value=1.2e+02 Score=20.74 Aligned_cols=23 Identities=26% Similarity=0.394 Sum_probs=18.7
Q ss_pred EEEEECCCCCCHHHHHHHHHHhC
Q 022539 269 KFDIMFPSRLTAEQKSDLKRALG 291 (295)
Q Consensus 269 ~~~v~~P~~l~~~~~~~l~~~l~ 291 (295)
.-...||..||+.+|..+-++-.
T Consensus 16 ~~~l~Fpp~ls~~eR~~vH~~a~ 38 (59)
T cd06007 16 NEEYEFPSSLTNHERAVIHRLCR 38 (59)
T ss_pred ccEEEcCCCCCHHHHHHHHHHHH
Confidence 35678999999999999877643
No 136
>PF08774 VRR_NUC: VRR-NUC domain; InterPro: IPR014883 This entry contains proteins with the VRR-NUC domain. It is associated with members of the PD-(D/E)XK nuclease superfamily, which include the type III restriction modification enzymes, for example StyLTI: (P40815 from SWISSPROT).; GO: 0016788 hydrolase activity, acting on ester bonds
Probab=21.74 E-value=1.5e+02 Score=21.89 Aligned_cols=28 Identities=18% Similarity=0.273 Sum_probs=23.7
Q ss_pred EEEEEEEECCC-CCCHHHHHHHHHHhCCC
Q 022539 266 LIIKFDIMFPS-RLTAEQKSDLKRALGGV 293 (295)
Q Consensus 266 L~v~~~v~~P~-~l~~~~~~~l~~~l~~~ 293 (295)
.+.-++|..|. .||++|+.-|..+....
T Consensus 62 ~~~~iEvK~p~~~ls~~Q~~~~~~l~~~G 90 (100)
T PF08774_consen 62 IFLFIEVKGPGDRLSPNQKEWIDKLREAG 90 (100)
T ss_pred EEEEEEEcCCCCCcCHHHHHHHHHHHHCC
Confidence 67888899995 79999999999887654
No 137
>smart00276 GLECT Galectin. Galectin - galactose-binding lectin
Probab=21.24 E-value=1.4e+02 Score=23.28 Aligned_cols=42 Identities=19% Similarity=0.429 Sum_probs=29.3
Q ss_pred EeeCCCCCCCcEEEEcCCCcCCCCC-----CCCCCCEEEEEEEECCC
Q 022539 235 LPVTDIIQPGSEVVIPNEGMPISKD-----PSKKGNLIIKFDIMFPS 276 (295)
Q Consensus 235 v~i~~~~~~g~~~rl~g~G~p~~~~-----~~~~GDL~v~~~v~~P~ 276 (295)
..+|.+..+|+.+.|.|.=.+.... ....+|+.++|++.|++
T Consensus 3 ~~lp~~l~~G~~i~i~G~~~~~~~~F~inl~~~~~di~lH~n~rf~~ 49 (128)
T smart00276 3 LPIPGGLKPGQTLTVRGIVLPDAKRFSINLLTGGDDIALHFNPRFNE 49 (128)
T ss_pred ccCCCCCCCCCEEEEEEEECCCCCEEEEEeecCCCCEEEEEeccCCC
Confidence 4577788999999998764432210 01237999999999985
Done!