Query 022539
Match_columns 295
No_of_seqs 263 out of 2151
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 07:09:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022539.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022539hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lz8_A Putative chaperone DNAJ 100.0 5E-68 1.7E-72 488.8 22.1 276 3-291 28-315 (329)
2 3agx_A DNAJ homolog subfamily 100.0 9.4E-49 3.2E-53 332.4 25.1 179 114-292 2-181 (181)
3 2q2g_A HSP40 protein, heat sho 100.0 1.1E-48 3.8E-53 331.8 24.3 178 113-291 2-180 (180)
4 1c3g_A Heat shock protein 40; 100.0 6.4E-46 2.2E-50 312.1 18.5 169 115-287 1-170 (170)
5 1nlt_A Protein YDJ1, mitochond 100.0 1.5E-44 5.3E-49 320.9 21.5 177 110-287 7-248 (248)
6 3i38_A Putative chaperone DNAJ 99.9 1.3E-27 4.6E-32 185.8 12.1 94 194-291 2-95 (109)
7 1xao_A YDJ1, mitochondrial pro 99.9 2.1E-26 7.2E-31 182.5 12.9 94 198-292 1-98 (121)
8 1hdj_A Human HSP40, HDJ-1; mol 99.9 1.1E-24 3.8E-29 159.1 5.1 75 1-77 1-75 (77)
9 1bq0_A DNAJ, HSP40; chaperone, 99.9 9.9E-24 3.4E-28 162.6 5.2 77 1-78 1-77 (103)
10 2ej7_A HCG3 gene; HCG3 protein 99.9 2.4E-23 8.2E-28 153.8 5.1 74 2-75 8-81 (82)
11 2lgw_A DNAJ homolog subfamily 99.9 1.6E-23 5.6E-28 160.0 3.0 76 2-77 1-76 (99)
12 2dmx_A DNAJ homolog subfamily 99.9 5.9E-23 2E-27 155.0 4.5 76 2-77 8-83 (92)
13 2dn9_A DNAJ homolog subfamily 99.9 7.8E-23 2.7E-27 150.0 4.7 72 2-74 6-77 (79)
14 2ctr_A DNAJ homolog subfamily 99.9 1E-22 3.5E-27 152.5 4.0 74 2-77 6-79 (88)
15 2ctp_A DNAJ homolog subfamily 99.9 2.4E-22 8.2E-27 147.0 4.6 71 2-74 6-76 (78)
16 2cug_A Mkiaa0962 protein; DNAJ 99.9 2.1E-22 7.1E-27 150.8 3.9 71 1-73 15-85 (88)
17 2och_A Hypothetical protein DN 99.8 5E-22 1.7E-26 143.5 4.6 67 2-72 7-73 (73)
18 2o37_A Protein SIS1; HSP40, J- 99.8 2.5E-22 8.7E-27 151.5 2.5 72 2-77 7-78 (92)
19 2ctw_A DNAJ homolog subfamily 99.8 6.2E-22 2.1E-26 154.0 3.2 73 2-75 16-88 (109)
20 2ctq_A DNAJ homolog subfamily 99.8 4E-22 1.4E-26 155.9 1.9 73 2-75 19-91 (112)
21 2yua_A Williams-beuren syndrom 99.8 2.5E-21 8.4E-26 148.1 4.0 67 2-69 16-82 (99)
22 1wjz_A 1700030A21RIK protein; 99.8 7.9E-21 2.7E-25 143.9 3.4 70 2-71 15-89 (94)
23 3apq_A DNAJ homolog subfamily 99.8 3.1E-20 1E-24 160.0 4.3 74 3-77 2-75 (210)
24 2qsa_A DNAJ homolog DNJ-2; J-d 99.8 1.9E-20 6.5E-25 145.7 0.8 71 2-72 14-87 (109)
25 2ys8_A RAB-related GTP-binding 99.8 1.4E-19 4.8E-24 135.8 4.4 62 2-65 26-87 (90)
26 2l6l_A DNAJ homolog subfamily 99.8 4.4E-19 1.5E-23 146.4 4.9 69 2-70 9-82 (155)
27 1iur_A KIAA0730 protein; DNAJ 99.7 1.9E-19 6.3E-24 134.3 2.1 63 3-65 16-78 (88)
28 1faf_A Large T antigen; J doma 99.7 2.8E-19 9.7E-24 130.8 3.0 66 3-74 11-78 (79)
29 1gh6_A Large T antigen; tumor 99.7 5.7E-20 1.9E-24 143.6 -1.0 64 3-71 8-73 (114)
30 2pf4_E Small T antigen; PP2A, 99.7 1.6E-19 5.4E-24 150.5 -1.9 64 3-71 11-76 (174)
31 1n4c_A Auxilin; four helix bun 99.7 4.8E-18 1.7E-22 142.4 3.9 64 3-66 117-182 (182)
32 1fpo_A HSC20, chaperone protei 99.7 3.4E-18 1.2E-22 143.1 2.6 67 4-70 2-74 (171)
33 3hho_A CO-chaperone protein HS 99.7 5E-18 1.7E-22 142.5 3.5 67 2-68 3-75 (174)
34 3ag7_A Putative uncharacterize 99.7 5.6E-18 1.9E-22 130.6 2.7 60 2-62 40-105 (106)
35 2qwo_B Putative tyrosine-prote 99.7 5.9E-18 2E-22 126.7 2.7 57 3-59 33-91 (92)
36 3bvo_A CO-chaperone protein HS 99.7 1.2E-17 4.2E-22 143.6 3.5 67 2-68 42-114 (207)
37 2guz_A Mitochondrial import in 99.6 3.9E-17 1.3E-21 117.0 2.9 57 3-64 14-71 (71)
38 3apo_A DNAJ homolog subfamily 99.6 1.5E-17 5E-22 169.1 -1.2 76 1-77 19-94 (780)
39 3uo3_A J-type CO-chaperone JAC 99.6 3.8E-17 1.3E-21 137.7 0.8 63 2-68 10-79 (181)
40 3i38_A Putative chaperone DNAJ 99.2 1.6E-11 5.6E-16 94.9 6.2 75 112-200 9-83 (109)
41 2y4t_A DNAJ homolog subfamily 99.1 5.3E-11 1.8E-15 110.7 5.0 66 3-68 382-449 (450)
42 1xao_A YDJ1, mitochondrial pro 99.1 1.7E-10 5.9E-15 90.8 7.0 75 112-198 4-81 (121)
43 2q2g_A HSP40 protein, heat sho 98.9 2.6E-09 9E-14 89.8 9.0 75 203-279 3-89 (180)
44 1c3g_A Heat shock protein 40; 98.9 3.1E-09 1.1E-13 88.5 8.6 75 204-279 1-83 (170)
45 3agx_A DNAJ homolog subfamily 98.9 5.8E-09 2E-13 87.7 9.5 75 203-279 2-89 (181)
46 2guz_B Mitochondrial import in 98.9 1.5E-09 5.2E-14 75.6 4.0 50 5-59 6-58 (65)
47 3lz8_A Putative chaperone DNAJ 98.8 5.7E-09 2E-13 95.6 7.1 77 201-278 138-227 (329)
48 1nlt_A Protein YDJ1, mitochond 98.7 1.3E-08 4.6E-13 89.7 5.8 76 111-198 158-236 (248)
49 2ctt_A DNAJ homolog subfamily 94.0 0.0034 1.2E-07 47.3 -2.6 30 114-143 1-30 (104)
50 2cqn_A Formin-binding protein 33.1 23 0.0008 24.5 2.2 55 15-70 6-62 (77)
51 2pi2_E Replication protein A 1 29.5 2E+02 0.0067 22.3 9.1 64 219-289 58-126 (142)
52 1ny9_A Transcriptional activat 28.5 70 0.0024 24.4 4.5 45 18-71 80-124 (143)
53 1i11_A Transcription factor SO 25.3 78 0.0027 21.5 3.9 41 21-67 16-56 (81)
54 2xzz_A Protein-glutamine gamma 25.2 1.9E+02 0.0064 20.9 6.1 66 201-271 17-86 (102)
55 2hcz_X Beta-expansin 1A; domai 25.2 1.8E+02 0.0063 24.6 6.9 103 130-248 127-239 (245)
56 4a3n_A Transcription factor SO 23.9 46 0.0016 21.8 2.3 40 21-66 14-53 (71)
57 1qqr_A Streptokinase domain B; 23.6 44 0.0015 25.8 2.3 31 6-36 35-65 (138)
58 1uzc_A Hypothetical protein FL 22.7 92 0.0031 21.1 3.7 52 14-69 11-65 (71)
59 1msz_A DNA-binding protein smu 22.3 48 0.0016 23.6 2.2 20 271-290 35-54 (86)
60 3zxf_A Galectin-7; sugar bindi 22.2 1.4E+02 0.0048 22.6 5.2 44 233-276 8-59 (138)
61 3nm9_A HMG-D, high mobility gr 22.0 1.3E+02 0.0044 19.8 4.4 38 21-67 15-52 (73)
62 1n10_A PHL P I, pollen allerge 22.0 2.6E+02 0.0089 23.6 7.2 104 129-248 126-239 (241)
63 1hme_A High mobility group pro 21.0 1E+02 0.0035 20.5 3.7 39 21-65 18-56 (77)
64 2crj_A SWI/SNF-related matrix- 20.9 1.1E+02 0.0036 21.4 3.9 41 21-67 19-59 (92)
65 2wkk_A Galectin-2; sugar-bindi 20.7 1.6E+02 0.0055 22.8 5.3 43 234-276 10-58 (150)
No 1
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=100.00 E-value=5e-68 Score=488.77 Aligned_cols=276 Identities=24% Similarity=0.368 Sum_probs=164.6
Q ss_pred CCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCcc---CC
Q 022539 3 VDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKAS---DF 79 (295)
Q Consensus 3 ~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~---~~ 79 (295)
+|||+||||+++||.+|||+|||+||++||||+|++ ..|+++|++|++||++|+||.+|+.||+|+..+...+ .+
T Consensus 28 ~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~--~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~~~~~~~~ 105 (329)
T 3lz8_A 28 KDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKE--NDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQHRNDPGFGRQR 105 (329)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCC--hHHHHHHHHHHHHHHHhhhhhhhcccchhhccccCCCccccc
Confidence 799999999999999999999999999999999975 3688999999999999999999999999854422111 01
Q ss_pred C--CCCCCCCCCC-CccccCCCCCCCCCCC----CCCCCCCCCCeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEEE
Q 022539 80 G--TPSYHHPHDT-KPCATRNNNNNNHRAG----GAGPKPTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITV 152 (295)
Q Consensus 80 g--~~~~~~~~~~-~~f~~~~~~~~~f~~~----~~~~~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~~ 152 (295)
+ +++ |...+. ..|.. .|+++ +.+.++++.|+.++|.|||+|+|+|+++++.+.+.++++.|+++..
T Consensus 106 ~~~~~~-f~~~~f~diF~~------~Fg~~g~~~~~~~~~~g~Dl~~~l~vsleea~~G~~k~i~i~~~v~~g~G~v~~~ 178 (329)
T 3lz8_A 106 QTHEQS-YSQQDFDDIFSS------MFGQQAHQRRRQHAARGHDLEIEVAVFLEETLAEQTRTISYNLPVYNVFGMIESE 178 (329)
T ss_dssp --------------------------------------CCCCCCEEEEECCCTTGGGSCEEEEEEEEEEECCSCC-CCEE
T ss_pred ccccCC-cCCCchhhhhHh------hhcCcCCCCCCCCcCCCCCEEEEEecchhhhhhccceEEEEEEEeecCCeEEEEe
Confidence 0 011 110000 11211 12211 1123567999999999999999999999999999999988875443
Q ss_pred -EEEEEEEeCCCCcCCCeEecCCCCCCCC-CCCCccEEEEEEEeCCcceeecCCceEEEEEecHHHHhcCCEEEEeccCC
Q 022539 153 -QEILKIDIKPGWKKGTKITFPEKGNQEP-GLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDG 230 (295)
Q Consensus 153 -~~~l~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDliv~i~v~~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g 230 (295)
.++++|+||||+++|++|+|+|+|++++ ++.+|||+|+|+++||+.|+|+|+||+++++|++++|+||++++|+|+||
T Consensus 179 ~~~~l~V~IP~Gv~~G~~Irl~G~G~~g~~gg~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~v~VptLdG 258 (329)
T 3lz8_A 179 TPKTLNVKIPAGVVDGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKE 258 (329)
T ss_dssp EEEEEEEEECTTCCTTCEEEESSCSCCC---CCCCCEEEEECCCCCSSCEEETTEEEEEEEECHHHHHHCEEEEECCSSS
T ss_pred cceEEEEeCCCCCCCCCEEEEcccccCCCCCCCCCcEEEEEEEecCCccEEcCCcEEEEEECCHHHHcCCCeEEEECCCC
Confidence 6789999999999999999999999974 67899999999999999999999999999999999999999999999999
Q ss_pred cEEEEeeCCCCCCCcEEEEcCCCcCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHhC
Q 022539 231 RNLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALG 291 (295)
Q Consensus 231 ~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~~l~~~l~ 291 (295)
+ ++|+||+++++|+++||+|+|||.. +.+|||||+|+|.||+.||++|+++|+++..
T Consensus 259 ~-v~l~ip~gt~~g~~~rl~G~GmP~~---~~rGDL~v~~~V~~P~~l~~~q~~~l~~~~~ 315 (329)
T 3lz8_A 259 S-ILLTVPPGSQAGQRLRIKGKGLVSK---THTGDLFAVIKIVMPTKPDEKARELWQQLAA 315 (329)
T ss_dssp C-EEEEECTTCCTTCEEEETTCSCBCS---SCBCCEEEEEEECCCSSCCHHHHHHHHHHHH
T ss_pred C-EEEEECCCCCCCCEEEEcCCCCCCC---CCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence 7 7999999999999999999999965 3689999999999999999999999999865
No 2
>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A
Probab=100.00 E-value=9.4e-49 Score=332.39 Aligned_cols=179 Identities=43% Similarity=0.809 Sum_probs=165.7
Q ss_pred CCCeeeecccCHHHHhcCceeEEEEeEEeeCCCCc-EEEEEEEEEEEeCCCCcCCCeEecCCCCCCCCCCCCccEEEEEE
Q 022539 114 PTPIETQLLCTLEELYKGARKKMKISRVLPDHFGK-PITVQEILKIDIKPGWKKGTKITFPEKGNQEPGLPPADLIFVVE 192 (295)
Q Consensus 114 ~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~-~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDliv~i~ 192 (295)
++|+++.|.|||+|||+|+++++.+.+.|..|.|+ ++.+.++++|.||||+++|++|+|+|+|++++++.+|||+|+|+
T Consensus 2 ~~d~~~~l~islee~~~G~~k~i~i~~~c~~c~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~G~G~~~~~g~~GDl~v~i~ 81 (181)
T 3agx_A 2 DPPVTHDLRVSLEEIYSGCTKKMKISHKRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFVLK 81 (181)
T ss_dssp ----CEEEEECHHHHHHCEEEEEEEEEEEECTTSSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCSSSCCCCEEEEEE
T ss_pred CCCEEEEEEEEHHHhcCCcEEEEEEecccCCCCCceEEEEeEEEEEEECCCccCCcEEEEeeccccCCCCCcccEEEEEE
Confidence 46899999999999999999999999888766653 67788999999999999999999999999998889999999999
Q ss_pred EeCCcceeecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCCCCCCcEEEEcCCCcCCCCCCCCCCCEEEEEEE
Q 022539 193 EKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDI 272 (295)
Q Consensus 193 v~~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GDL~v~~~v 272 (295)
++||+.|+|+|+||+++++||+++|++|+++.|+|+||+++.|++|+++++|+++||+|+|||..++++.+|||||+|+|
T Consensus 82 ~~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG~~~~i~i~~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~V 161 (181)
T 3agx_A 82 DKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEV 161 (181)
T ss_dssp ECCCSSCEEETTEEEEEEEEEHHHHHHCEEEEEECTTSCEEEEEECSCCCTTCEEEETTCSCBCSSSTTSBCCEEEEEEE
T ss_pred EeccccceeeCCcEEEEEEcCHHHHhCCCEEEeECCCCCEEEEECCCccCCCcEEEECCcCCCcCCCCCCcCCEEEEEEE
Confidence 99999999999999999999999999999999999999889999999999999999999999987645678999999999
Q ss_pred ECCCCCCHHHHHHHHHHhCC
Q 022539 273 MFPSRLTAEQKSDLKRALGG 292 (295)
Q Consensus 273 ~~P~~l~~~~~~~l~~~l~~ 292 (295)
.||++||++|+++|+++++.
T Consensus 162 ~~P~~ls~~q~~~l~~~~~~ 181 (181)
T 3agx_A 162 IFPERIPQTSRTVLEQVLPI 181 (181)
T ss_dssp ECCSCCCHHHHHHHHHHSCC
T ss_pred ECCCCCCHHHHHHHHHhccC
Confidence 99999999999999999974
No 3
>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.1e-48 Score=331.75 Aligned_cols=178 Identities=45% Similarity=0.818 Sum_probs=167.1
Q ss_pred CCCCeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCCCcCCCeEecCCCCCC-CCCCCCccEEEEE
Q 022539 113 TPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQ-EPGLPPADLIFVV 191 (295)
Q Consensus 113 ~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~-~~~~~~GDliv~i 191 (295)
+++|+++.|.|||+|||+|+++++.+.+.+.|++| .+.+.++++|.|||||++|++|+|+|+|++ .+++.+|||+|+|
T Consensus 2 ~g~d~~~~l~islee~~~G~~k~i~~~~~~~c~~g-~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~g~~gg~~GDl~v~i 80 (180)
T 2q2g_A 2 APRSHEVPLLVTLEELYLGKRKKIKVTRKRFIEHK-VRNEENIVEVEIKPGWKDGTKLTYSGEGDQESPGTSPGDLVLII 80 (180)
T ss_dssp --CEEEEEEEECHHHHHHCEEEEEEEEEEEEETTE-EEEEEEEEEEEECTTCCTTCEEEETTCSCCSSTTSCCCEEEEEE
T ss_pred CCCCEEEEEEeeHHHhcCCcEEEEEEeEEEecCCc-eEEeeEEEEEEECCCCcCCcEEEEeeccCCCCCCCccccEEEEE
Confidence 36799999999999999999999999999888775 677888999999999999999999999999 6888999999999
Q ss_pred EEeCCcceeecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCCCCCCcEEEEcCCCcCCCCCCCCCCCEEEEEE
Q 022539 192 EEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFD 271 (295)
Q Consensus 192 ~v~~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GDL~v~~~ 271 (295)
+++||+.|+|+|+||+++++||+++|++|+++.|+|+||+++.|++|+++++|+++||+|+|||..++++.+|||||+|+
T Consensus 81 ~~~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG~~v~i~ip~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~ 160 (180)
T 2q2g_A 81 QTKTHPRFTRDDCHLIMKVTIPLVRALTGFTCPVTTLDNRNLQIPIKEIVNPKTRKIVPNEGMPIKNQPGQKGDLILEFD 160 (180)
T ss_dssp EECCCSSCEEETTEEEEEEEEEHHHHHHCEEEEEECTTCCEEEEEECSCCCTTCEEEETTCSCBCSSSTTCBCCEEEEEE
T ss_pred EEEecccEEEcCCEEEEEEEcCHHHHhCCCEEEeeCCCCCEEEEECCCccCCCEEEEECCcCCCcCCCCCCcCCEEEEEE
Confidence 99999999999999999999999999999999999999988999999999999999999999998765567899999999
Q ss_pred EECCCCCCHHHHHHHHHHhC
Q 022539 272 IMFPSRLTAEQKSDLKRALG 291 (295)
Q Consensus 272 v~~P~~l~~~~~~~l~~~l~ 291 (295)
|.||++||++|+++|+++||
T Consensus 161 V~~P~~Ls~~q~~~l~~~~p 180 (180)
T 2q2g_A 161 ICFPKSLTPEQKKLIKEALD 180 (180)
T ss_dssp EECCSCCCHHHHHHHHHHC-
T ss_pred EECCCCCCHHHHHHHHHhcC
Confidence 99999999999999999985
No 4
>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A
Probab=100.00 E-value=6.4e-46 Score=312.05 Aligned_cols=169 Identities=37% Similarity=0.682 Sum_probs=157.3
Q ss_pred CCeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCCCcCCCeEecCCCCCC-CCCCCCccEEEEEEE
Q 022539 115 TPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQ-EPGLPPADLIFVVEE 193 (295)
Q Consensus 115 ~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~-~~~~~~GDliv~i~v 193 (295)
+|+++.|.|||+|||+|+++++.+.+.. ++|+. +.++++|.||||+++|++|+|+|+|++ .+++.+|||+|+|++
T Consensus 1 ~d~~~~l~islee~~~G~~k~i~~~~~~--~~G~~--~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~gg~~GDl~v~i~v 76 (170)
T 1c3g_A 1 ETVQVNLPVSLEDLFVGKKKSFKIGRKG--PHGAS--EKTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQE 76 (170)
T ss_dssp CEEEEEEEECHHHHHHTCEEEEEEEEEE--TTTEE--EEEEEEEECCTTCCTTCEEEESSCSSBCSSSSCBCEEEEEEEE
T ss_pred CCEEEEEEeEHHHhhCCcEEEEEEEEec--CCCcE--EeEEEEEEeCCCccCCCEEEEeccccCCCCCCccccEEEEEEE
Confidence 3789999999999999999999999873 46754 778999999999999999999999995 478899999999999
Q ss_pred eCCcceeecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCCCCCCcEEEEcCCCcCCCCCCCCCCCEEEEEEEE
Q 022539 194 KPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIM 273 (295)
Q Consensus 194 ~~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GDL~v~~~v~ 273 (295)
+||+.|+|+|+||+++++||+++|++|+++.|+|+||+++.|++|+++++|+++||+|+|||..++++.+|||||+|+|.
T Consensus 77 ~~h~~F~R~G~DL~~~~~Isl~eAllG~~~~v~tldG~~~~i~i~~~t~~g~~~rl~g~G~p~~~~~~~~GDL~V~~~V~ 156 (170)
T 1c3g_A 77 KSHPNFKRDGDDLIYTLPLSFKESLLGFSKTIQTIDGRTLPLSRVQPVQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVD 156 (170)
T ss_dssp CCCSSEEEETTEEEEEECCBHHHHHHCEEEEEECSSSCEEEEEESSCCCTTCEEECTTCSCBCSSCTTSBCCEEEEECCB
T ss_pred ccCCccEEeCCcEeEEEEcCHHHHhCCCeEEeeCCCCCEEEEECCCccCCCcEEEEeCCCCCcCCCCCCCCCEEEEEEEE
Confidence 99999999999999999999999999999999999998899999999999999999999999876556789999999999
Q ss_pred CCCCCCHHHHHHHH
Q 022539 274 FPSRLTAEQKSDLK 287 (295)
Q Consensus 274 ~P~~l~~~~~~~l~ 287 (295)
||++||++|+++|+
T Consensus 157 ~P~~Ls~~q~~~l~ 170 (170)
T 1c3g_A 157 YPISLNDAQKRAID 170 (170)
T ss_dssp CCSSCCTTHHHHTC
T ss_pred CCCCCCHHHHHhhC
Confidence 99999999999873
No 5
>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1
Probab=100.00 E-value=1.5e-44 Score=320.86 Aligned_cols=177 Identities=36% Similarity=0.609 Sum_probs=151.1
Q ss_pred CCCCCCCeeeecccCHHHHhcCceeEEEEeEEeeC----CC----------------C----------------------
Q 022539 110 PKPTPTPIETQLLCTLEELYKGARKKMKISRVLPD----HF----------------G---------------------- 147 (295)
Q Consensus 110 ~~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~----g~----------------G---------------------- 147 (295)
.++++.|+++.|.|||+|||+|+++++.+.+.+.| |+ |
T Consensus 7 ~~~~g~d~~~~l~vslee~~~G~~k~i~~~r~~~C~~C~G~G~~~g~~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C 86 (248)
T 1nlt_A 7 GPQRGKDIKHEISASLEELYKGRTAKLALNKQILCKECEGRGGKKGAVKKCTSCNGQGIKFVTRQMGPMIQRFQTECDVC 86 (248)
T ss_dssp -CCBCCCEEEEEEECTTHHHHCEEEEEEEEEEEECTTTTTCSBSTTTCCCCTTSSSSSCEEEEEESSSEEEEEECSCTTC
T ss_pred CCCCCCCEEEEEEecHHHhcCCceEEEEeeEEEeCCCCcCccCCCCCCccCCCCCCCcEEEEEEecCceEEEEEEcCCCC
Confidence 34678999999999999999999999999876531 11 1
Q ss_pred -------------------cEEEEEEEEEEEeCCCCcCCCeEecCCCCCCCCCCCCccEEEEEEEeCCcceeecCCceEE
Q 022539 148 -------------------KPITVQEILKIDIKPGWKKGTKITFPEKGNQEPGLPPADLIFVVEEKPHAVFQRDGNDLVV 208 (295)
Q Consensus 148 -------------------~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDliv~i~v~~h~~f~r~g~DL~~ 208 (295)
.++.+.++++|.|||||++|++|+|+|+|++.+++.+|||||+|+++||+.|+|+|+||++
T Consensus 87 ~G~G~~i~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~g~~GDl~v~i~v~~h~~F~R~G~DL~~ 166 (248)
T 1nlt_A 87 HGTGDIIDPKDRCKSCNGKKVENERKILEVHVEPGMKDGQRIVFKGEADQAPDVIPGDVVFIVSERPHKSFKRDGDDLVY 166 (248)
T ss_dssp SSSSSCCCTTSBCSSSTTSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCTTCBCCCEEEEEEECCCSSCEEETTEEEE
T ss_pred CCcCEEeccCCCCcccCCCceEeeeEEEEEEECCCccCCCEEEEeeeecCCCCCCcceEEEEEEEecCccceeeCCEEEE
Confidence 1356778999999999999999999999999988899999999999999999999999999
Q ss_pred EEEecHHHHhcCCEEEEeccCCcEEEEeeCCC--CCCCcEEEEcCCCcCCCCCCCCCCCEEEEEEEECCCC--CCHHHHH
Q 022539 209 NHKISLLEALTGLSLNLTALDGRNLTLPVTDI--IQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMFPSR--LTAEQKS 284 (295)
Q Consensus 209 ~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~--~~~g~~~rl~g~G~p~~~~~~~~GDL~v~~~v~~P~~--l~~~~~~ 284 (295)
+++|||+||++|++++|+||||+.+.|+||++ +++|+++||+|+|||...++ .+|||||+|+|.||++ ||++|++
T Consensus 167 ~~~Isl~eAllG~~i~v~tldG~~~~i~ip~g~vt~~g~~~rl~g~Gmp~~~~~-~~GDL~V~~~V~~P~~~~Ls~~q~~ 245 (248)
T 1nlt_A 167 EAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYG-GYGNLIIKFTIKDPENHFTSEENLK 245 (248)
T ss_dssp EEEEEHHHHHHCBCCEEECSSSCEEECCBCTTTTCSTTCEEEETTCSCBCSSSC-SBCCEEEEEEEECCC----------
T ss_pred EEEeCHHHHhcCCEEEEeCCCCCEEEEEeCCCCeeCCCeEEEEcCCCCccCCCC-CcCCEEEEEEEECCCCCCCCHHHHH
Confidence 99999999999999999999998899999987 99999999999999986644 6899999999999999 9999999
Q ss_pred HHH
Q 022539 285 DLK 287 (295)
Q Consensus 285 ~l~ 287 (295)
+|+
T Consensus 246 ~l~ 248 (248)
T 1nlt_A 246 KLE 248 (248)
T ss_dssp ---
T ss_pred hhC
Confidence 885
No 6
>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}
Probab=99.95 E-value=1.3e-27 Score=185.82 Aligned_cols=94 Identities=19% Similarity=0.340 Sum_probs=88.2
Q ss_pred eCCcceeecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCCCCCCcEEEEcCCCcCCCCCCCCCCCEEEEEEEE
Q 022539 194 KPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIM 273 (295)
Q Consensus 194 ~~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GDL~v~~~v~ 273 (295)
+||+.|+|+|+||+++++||+.+|++|++++|+|+||. +.|+||+++++|+++||+|+|||.. +.+|||||+|+|.
T Consensus 2 kph~~F~R~G~DL~~~~~Isl~eAl~G~~i~v~tldG~-~~v~ip~g~~~G~~~rl~G~G~p~~---~~~GDL~v~~~V~ 77 (109)
T 3i38_A 2 NAHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKES-ILLTVPPGSQAGQRLRIKGKGLVSK---THTGDLFAVIKIV 77 (109)
T ss_dssp --CCCCEEETTEEEEEEEECHHHHHHCEEEEECCSSSC-EEEEECTTCCTTCEEEETTCSCBCS---SCBCCEEEEEEEC
T ss_pred CCCCCeEEECCEEEEEEEcCHHHHhCCCEEEEEcCCCC-EEEeeCCCcCcCeEEEECCccCCCC---CCCcCEEEEEEEE
Confidence 68999999999999999999999999999999999995 9999999999999999999999973 3799999999999
Q ss_pred CCCCCCHHHHHHHHHHhC
Q 022539 274 FPSRLTAEQKSDLKRALG 291 (295)
Q Consensus 274 ~P~~l~~~~~~~l~~~l~ 291 (295)
||++||++|+++|++++.
T Consensus 78 ~P~~Ls~~q~~~l~~l~~ 95 (109)
T 3i38_A 78 MPTKPDEKARELWQQLAA 95 (109)
T ss_dssp CCSSCCHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHh
Confidence 999999999999999875
No 7
>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}
Probab=99.94 E-value=2.1e-26 Score=182.47 Aligned_cols=94 Identities=40% Similarity=0.610 Sum_probs=85.3
Q ss_pred ceeecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCC--CCCCcEEEEcCCCcCCCCCCCCCCCEEEEEEEECC
Q 022539 198 VFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDI--IQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMFP 275 (295)
Q Consensus 198 ~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~--~~~g~~~rl~g~G~p~~~~~~~~GDL~v~~~v~~P 275 (295)
.|+|+|+||+++++|||++|++|+++.|+|+||+++.|+||++ +++|+++||+|+|||..+++ .+|||||+|+|.||
T Consensus 1 ~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG~~~~v~ip~g~v~~~G~~~rl~G~Gmp~~~~~-~~GDL~V~~~V~~P 79 (121)
T 1xao_A 1 SFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYG-GYGNLIIKFTIKFP 79 (121)
T ss_dssp CCEEETTEEEEEEEEEHHHHHHCEEEEEECTTSCEEEEEECTTSCCCTTCEEEETTCSCC-------CCCEEEEEEEECC
T ss_pred CceEECCeEEEEEEcCHHHHhCCCEEEEecCCCCEEEEEeCCCCeeCCCcEEEECCCCCCCCCCC-CCCCEEEEEEEECC
Confidence 4999999999999999999999999999999998899999988 99999999999999987644 78999999999999
Q ss_pred CC--CCHHHHHHHHHHhCC
Q 022539 276 SR--LTAEQKSDLKRALGG 292 (295)
Q Consensus 276 ~~--l~~~~~~~l~~~l~~ 292 (295)
+. ||++|+++|+++++.
T Consensus 80 ~~~~ls~~q~~~l~~l~~~ 98 (121)
T 1xao_A 80 ENHFTSEENLKKLEEILPP 98 (121)
T ss_dssp CTTCSCHHHHHHHHHHSCC
T ss_pred CCCCCCHHHHHHHHHHccc
Confidence 99 999999999999985
No 8
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.90 E-value=1.1e-24 Score=159.14 Aligned_cols=75 Identities=60% Similarity=1.064 Sum_probs=70.2
Q ss_pred CCCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCcc
Q 022539 1 MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKAS 77 (295)
Q Consensus 1 m~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~ 77 (295)
|+.|||+||||+++||.++||+|||+|+++||||++++ +.+.+.|+.|++||++|+||.+|+.||++|.+++.++
T Consensus 1 m~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~--~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~~ 75 (77)
T 1hdj_A 1 MGKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKE--PGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKGS 75 (77)
T ss_dssp CCCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCC--TTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGCCSS
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--ccHHHHHHHHHHHHHHHCCHHHHHHHHHHcccccccC
Confidence 89999999999999999999999999999999999976 3578999999999999999999999999999887643
No 9
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.88 E-value=9.9e-24 Score=162.62 Aligned_cols=77 Identities=52% Similarity=0.875 Sum_probs=71.4
Q ss_pred CCCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCccC
Q 022539 1 MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASD 78 (295)
Q Consensus 1 m~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~ 78 (295)
|..|||+||||+++|+.++||+|||+|+++||||+++.+ +++.++|++|++||++|+||.+|+.||++|++++..++
T Consensus 1 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~-~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~~~ 77 (103)
T 1bq0_A 1 AKQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGD-KEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQGG 77 (103)
T ss_dssp CCCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTT-CTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTSSCSCC
T ss_pred CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCc-HHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhhhcccC
Confidence 889999999999999999999999999999999999753 36789999999999999999999999999999887543
No 10
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.88 E-value=2.4e-23 Score=153.83 Aligned_cols=74 Identities=53% Similarity=0.984 Sum_probs=68.7
Q ss_pred CCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCC
Q 022539 2 GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLK 75 (295)
Q Consensus 2 ~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~ 75 (295)
..|||+||||+++|+.++||+|||+|+++||||+++...+.+.+.|++|++||++|+||.+|+.||++|+.++.
T Consensus 8 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~~~ 81 (82)
T 2ej7_A 8 MVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSGPSS 81 (82)
T ss_dssp SCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCCSCC
T ss_pred CcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCccccC
Confidence 46999999999999999999999999999999999876557889999999999999999999999999987654
No 11
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.87 E-value=1.6e-23 Score=160.04 Aligned_cols=76 Identities=57% Similarity=0.993 Sum_probs=67.5
Q ss_pred CCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCcc
Q 022539 2 GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKAS 77 (295)
Q Consensus 2 ~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~ 77 (295)
+.|||+||||+++|+.+|||+|||+|+++||||+++...+.+.+.|+.|++||++|+||.+|+.||.+|.+++.+.
T Consensus 1 M~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~~~~~ 76 (99)
T 2lgw_A 1 MASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGT 76 (99)
T ss_dssp CCCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC-----
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccCC
Confidence 3799999999999999999999999999999999987656789999999999999999999999999998877644
No 12
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.87 E-value=5.9e-23 Score=155.04 Aligned_cols=76 Identities=50% Similarity=0.942 Sum_probs=70.5
Q ss_pred CCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCcc
Q 022539 2 GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKAS 77 (295)
Q Consensus 2 ~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~ 77 (295)
..|||+||||+++|+.++||+|||+|+++||||+++...+.+.+.|++|++||++|+||.+|+.||++|..++..+
T Consensus 8 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~~ 83 (92)
T 2dmx_A 8 MANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDSWRAG 83 (92)
T ss_dssp CCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSCSSCCC
T ss_pred CcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccCC
Confidence 3699999999999999999999999999999999987656789999999999999999999999999999887654
No 13
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.86 E-value=7.8e-23 Score=150.01 Aligned_cols=72 Identities=47% Similarity=0.781 Sum_probs=66.5
Q ss_pred CCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCC
Q 022539 2 GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGL 74 (295)
Q Consensus 2 ~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~ 74 (295)
..|||+||||+++|+.++||+|||+|+++||||+++.. +++.+.|+.|++||++|+||.+|+.||++|..+.
T Consensus 6 ~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~-~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~~ 77 (79)
T 2dn9_A 6 SGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDD-PKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSGPS 77 (79)
T ss_dssp CSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSC-TTHHHHHHHHHHHHHHHHSHHHHHHHHHSCCCCS
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCC-HHHHHHHHHHHHHHHHHCCHHHHHHHHhccCcCC
Confidence 57999999999999999999999999999999999754 4688999999999999999999999999997653
No 14
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.86 E-value=1e-22 Score=152.46 Aligned_cols=74 Identities=46% Similarity=0.807 Sum_probs=68.6
Q ss_pred CCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCcc
Q 022539 2 GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKAS 77 (295)
Q Consensus 2 ~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~ 77 (295)
..|||+||||+++|+.+|||+|||+|+++||||+++. +.+.+.|++|++||++|+||.+|+.||.+|..++.++
T Consensus 6 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~--~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~~ 79 (88)
T 2ctr_A 6 SGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKS--PDAEAKFREIAEAYETLSDANRRKEYDTLGHSAFTSG 79 (88)
T ss_dssp CCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCS--HHHHHHHHHHHHHHHHHHSSHHHHHHHHTCHHHHTCS
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC--hHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccccccC
Confidence 4799999999999999999999999999999999985 5789999999999999999999999999998776643
No 15
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.85 E-value=2.4e-22 Score=147.04 Aligned_cols=71 Identities=56% Similarity=0.915 Sum_probs=66.1
Q ss_pred CCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCC
Q 022539 2 GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGL 74 (295)
Q Consensus 2 ~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~ 74 (295)
..|||+||||+++|+.++||+|||+|+++||||+++. +.+.+.|+.|++||++|+||.+|+.||++|..+.
T Consensus 6 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~--~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~ 76 (78)
T 2ctp_A 6 SGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHA--PGATEAFKAIGTAYAVLSNPEKRKQYDQFGSGPS 76 (78)
T ss_dssp SCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSS--HHHHHHHHHHHHHHHHHTSHHHHHHHHHTCSCSC
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--ccHHHHHHHHHHHHHHHCCHHHHHHHHHcCcccc
Confidence 3699999999999999999999999999999999975 4688999999999999999999999999998653
No 16
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.85 E-value=2.1e-22 Score=150.79 Aligned_cols=71 Identities=49% Similarity=0.829 Sum_probs=65.9
Q ss_pred CCCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCC
Q 022539 1 MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEG 73 (295)
Q Consensus 1 m~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~ 73 (295)
+..|||+||||+++|+.++||+|||+|+++||||++++ +.+.+.|++|++||++|+||.+|+.||++|+.+
T Consensus 15 ~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~--~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 85 (88)
T 2cug_A 15 LDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKD--PGAEDRFIQISKAYEILSNEEKRTNYDHYGSGP 85 (88)
T ss_dssp SSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCS--TTHHHHHHHHHHHHHHHHSHHHHHHHHHHTTCC
T ss_pred CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC--hhHHHHHHHHHHHHHHHCCHHHHHHHHHcCCCC
Confidence 35799999999999999999999999999999999986 357899999999999999999999999999754
No 17
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.85 E-value=5e-22 Score=143.51 Aligned_cols=67 Identities=52% Similarity=0.929 Sum_probs=61.4
Q ss_pred CCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCC
Q 022539 2 GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPE 72 (295)
Q Consensus 2 ~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~ 72 (295)
..|||+||||+++|+.++||+|||+|+++||||++++. .+.|+.|++||++|+||.+|+.||++|++
T Consensus 7 ~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~----~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~ 73 (73)
T 2och_A 7 ETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDG----AEQFKQISQAYEVLSDEKKRQIYDQGGEE 73 (73)
T ss_dssp CCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTC----HHHHHHHHHHHHHHTSHHHHHHHHHTC--
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCH----HHHHHHHHHHHHHHCCHHHHHHHHhcCCC
Confidence 46899999999999999999999999999999999753 57999999999999999999999999863
No 18
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.84 E-value=2.5e-22 Score=151.54 Aligned_cols=72 Identities=47% Similarity=0.847 Sum_probs=66.5
Q ss_pred CCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCcc
Q 022539 2 GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKAS 77 (295)
Q Consensus 2 ~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~ 77 (295)
..|||+||||+++|+.+|||+|||+|+++||||+++.+ .+.|++|++||++|+||.+|+.||++|.+++..+
T Consensus 7 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~----~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~~ 78 (92)
T 2o37_A 7 ETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGD----TEKFKEISEAFEILNDPQKREIYDQYGLEAARSG 78 (92)
T ss_dssp CCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCC----HHHHHHHHHHHHHHTSHHHHHHHHHHCHHHHHTT
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCh----HHHHHHHHHHHHHHCCHHHHHHHHHHCHHHhhcc
Confidence 47999999999999999999999999999999999764 4699999999999999999999999998877643
No 19
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.84 E-value=6.2e-22 Score=154.02 Aligned_cols=73 Identities=51% Similarity=0.872 Sum_probs=67.7
Q ss_pred CCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCC
Q 022539 2 GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLK 75 (295)
Q Consensus 2 ~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~ 75 (295)
..|||+||||+++|+.+|||+|||+|+++||||+++.+ +++.+.|++|++||++|+||.+|+.||++|..++.
T Consensus 16 ~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~-~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~~~ 88 (109)
T 2ctw_A 16 GESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDN-PEAADKFKEINNAHAILTDATKRNIYDKYGSLGLY 88 (109)
T ss_dssp SCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTC-HHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHHHHH
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCc-HHHHHHHHHHHHHHHHHcCHHHHHHHHHhcccccc
Confidence 57999999999999999999999999999999999864 57889999999999999999999999999977654
No 20
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.83 E-value=4e-22 Score=155.85 Aligned_cols=73 Identities=25% Similarity=0.496 Sum_probs=67.7
Q ss_pred CCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCC
Q 022539 2 GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLK 75 (295)
Q Consensus 2 ~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~ 75 (295)
..|||+||||+++|+.++||+|||+|+++||||+++.+ +++.+.|++|++||++|+||.+|+.||++|..++.
T Consensus 19 ~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~-~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~ 91 (112)
T 2ctq_A 19 TEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPEN-PKAVETFQKLQKAKEILTNEESRARYDHWRRSQMS 91 (112)
T ss_dssp CCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTC-STHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHTCS
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc-HHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhhccC
Confidence 47999999999999999999999999999999999854 36889999999999999999999999999987664
No 21
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.82 E-value=2.5e-21 Score=148.09 Aligned_cols=67 Identities=34% Similarity=0.569 Sum_probs=62.7
Q ss_pred CCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCC
Q 022539 2 GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLY 69 (295)
Q Consensus 2 ~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~ 69 (295)
..|||+||||+++|+.++||+|||+|+++||||+++.+ +++.+.|++|++||++|+||.+|+.||++
T Consensus 16 ~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~-~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~ 82 (99)
T 2yua_A 16 RTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGS-AEAAERFTRISQAYVVLGSATLRRKYDRG 82 (99)
T ss_dssp SSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSC-SHHHHHHHHHHHHHHHTTSHHHHHHHHHT
T ss_pred ccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCC-HHHHHHHHHHHHHHHHHCCHHHHHHHHHh
Confidence 57999999999999999999999999999999999754 46889999999999999999999999984
No 22
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.81 E-value=7.9e-21 Score=143.86 Aligned_cols=70 Identities=33% Similarity=0.599 Sum_probs=63.5
Q ss_pred CCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-----cHHHHHHHHHHHHHhhhcCCccccccccCCCC
Q 022539 2 GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPAT-----NQQAEAKFKLISEAYDVLSDPRKRQIYDLYGP 71 (295)
Q Consensus 2 ~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~-----~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~ 71 (295)
..|||+||||+++|+.+|||+|||+|+++||||+++.+ ...+.+.|++|++||++|+||.+|+.||.+..
T Consensus 15 ~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~ 89 (94)
T 1wjz_A 15 KKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRS 89 (94)
T ss_dssp CSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSC
T ss_pred CCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHcc
Confidence 46999999999999999999999999999999998742 24688999999999999999999999998654
No 23
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.79 E-value=3.1e-20 Score=160.05 Aligned_cols=74 Identities=41% Similarity=0.785 Sum_probs=68.9
Q ss_pred CCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCcc
Q 022539 3 VDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKAS 77 (295)
Q Consensus 3 ~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~ 77 (295)
+|||+||||+++|+.+|||+|||+||++||||+++.+ +++.++|++|++||++|+||.+|+.||++|+.++...
T Consensus 2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~-~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~~~~ 75 (210)
T 3apq_A 2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNN-PNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLEDN 75 (210)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTC-TTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTTCCTT
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCC-hHHHHHHHHHHHHHHHhCCHHHHHHHHHhcccccccc
Confidence 7999999999999999999999999999999999754 4688999999999999999999999999999887644
No 24
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.78 E-value=1.9e-20 Score=145.65 Aligned_cols=71 Identities=34% Similarity=0.594 Sum_probs=64.7
Q ss_pred CCCccceecCCCCC-CHHHHHHHHHHHHHHhCCCCCCC--CcHHHHHHHHHHHHHhhhcCCccccccccCCCCC
Q 022539 2 GVDYYNILKVSRGA-TEDDLKKSYKRLAMKWHPDKNPA--TNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPE 72 (295)
Q Consensus 2 ~~d~Y~iLgv~~~a-~~~eIk~ayr~la~~~hPd~~~~--~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~ 72 (295)
..|||+||||+++| +.+|||+|||+|+++||||++++ ..+.+.+.|++|++||++|+||.+|+.||+++..
T Consensus 14 ~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~~ 87 (109)
T 2qsa_A 14 LENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLDH 87 (109)
T ss_dssp TSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC
T ss_pred CCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhccC
Confidence 47999999999999 99999999999999999999974 1346889999999999999999999999998753
No 25
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.77 E-value=1.4e-19 Score=135.83 Aligned_cols=62 Identities=34% Similarity=0.505 Sum_probs=57.6
Q ss_pred CCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCcccccc
Q 022539 2 GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQI 65 (295)
Q Consensus 2 ~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~ 65 (295)
..|||+||||+++|+.+|||+|||+|+++||||++++ +.+.+.|++|++||++|+|+.+|+.
T Consensus 26 ~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~--~~~~~~f~~i~~Ay~~L~d~~~R~~ 87 (90)
T 2ys8_A 26 SKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVA--PGSEDAFKAVVNARTALLKNIKSGP 87 (90)
T ss_dssp CSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCC--TTHHHHHHHHHHHHHHHHHHHCCSC
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC--ccHHHHHHHHHHHHHHHCCcccccC
Confidence 4799999999999999999999999999999999976 3578999999999999999999874
No 26
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.75 E-value=4.4e-19 Score=146.41 Aligned_cols=69 Identities=32% Similarity=0.594 Sum_probs=62.9
Q ss_pred CCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCc-----HHHHHHHHHHHHHhhhcCCccccccccCCC
Q 022539 2 GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATN-----QQAEAKFKLISEAYDVLSDPRKRQIYDLYG 70 (295)
Q Consensus 2 ~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~-----~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g 70 (295)
..|||+||||+++|+.++||+|||+|++++|||+++.+. +.|.+.|+.|++||++|+||.+|+.||..+
T Consensus 9 ~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~ 82 (155)
T 2l6l_A 9 KKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQR 82 (155)
T ss_dssp CSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHH
T ss_pred CCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHc
Confidence 469999999999999999999999999999999997642 247799999999999999999999999755
No 27
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.75 E-value=1.9e-19 Score=134.30 Aligned_cols=63 Identities=27% Similarity=0.440 Sum_probs=58.0
Q ss_pred CCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCcccccc
Q 022539 3 VDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQI 65 (295)
Q Consensus 3 ~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~ 65 (295)
.++|+||||+++|+.+|||+|||+||++||||+++++.+.+.++|++|++||++|+|...|..
T Consensus 16 ~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r~~ 78 (88)
T 1iur_A 16 KEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFLDQ 78 (88)
T ss_dssp HHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred HHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhccccc
Confidence 589999999999999999999999999999999987655689999999999999999887743
No 28
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.75 E-value=2.8e-19 Score=130.83 Aligned_cols=66 Identities=18% Similarity=0.307 Sum_probs=59.2
Q ss_pred CCccceecCCCC--CCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCC
Q 022539 3 VDYYNILKVSRG--ATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGL 74 (295)
Q Consensus 3 ~d~Y~iLgv~~~--a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~ 74 (295)
.++|+||||+++ |+.++||+|||+||++||||++++ .++|++|++||++|+|+.+|.. +.||..++
T Consensus 11 ~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~-----~~~f~~i~~AYe~L~~~~~r~~-~~~g~~~~ 78 (79)
T 1faf_A 11 ERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGS-----HALMQELNSLWGTFKTEVYNLR-MNLGGTGF 78 (79)
T ss_dssp HHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCC-----HHHHHHHHHHHHHHHHHHHHHT-TCCSSCCC
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-----HHHHHHHHHHHHHHhhHHHHHH-HhcCCccC
Confidence 479999999999 999999999999999999999864 5799999999999999999988 56776553
No 29
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.75 E-value=5.7e-20 Score=143.58 Aligned_cols=64 Identities=25% Similarity=0.397 Sum_probs=60.3
Q ss_pred CCccceecCCCCCCH--HHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCC
Q 022539 3 VDYYNILKVSRGATE--DDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGP 71 (295)
Q Consensus 3 ~d~Y~iLgv~~~a~~--~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~ 71 (295)
.|||+||||+++|+. ++||+|||+||+++|||++++ .++|++|++||++|+||.+|+.||.+|.
T Consensus 8 ~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~-----~e~f~~I~~AYevL~d~~~R~~~~~~~~ 73 (114)
T 1gh6_A 8 LQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD-----EEKMKKMNTLYKKMEDGVKYAHQPDFGG 73 (114)
T ss_dssp HHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT-----TTTTHHHHHHHHHHHHHHHSCCSSCCSC
T ss_pred hhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc-----HHHHHHHHHHHHHHCCHHHHHHhhhccc
Confidence 589999999999999 999999999999999999975 4799999999999999999999999875
No 30
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.72 E-value=1.6e-19 Score=150.52 Aligned_cols=64 Identities=25% Similarity=0.387 Sum_probs=57.6
Q ss_pred CCccceecCCCCCC--HHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCC
Q 022539 3 VDYYNILKVSRGAT--EDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGP 71 (295)
Q Consensus 3 ~d~Y~iLgv~~~a~--~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~ 71 (295)
.|||+||||+++|+ .+|||+|||++|+++|||++++ +++|++|++||++|+||.+|+.||+||.
T Consensus 11 ~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~-----~e~F~~I~~AYevLsdp~kR~~YD~~G~ 76 (174)
T 2pf4_E 11 LQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD-----EEKMKKMNTLYKKMEDGVKYAHQPDFGG 76 (174)
T ss_dssp HHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---C-----CTTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred ccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCC-----HHHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence 58999999999999 6999999999999999999975 3799999999999999999999999996
No 31
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.70 E-value=4.8e-18 Score=142.39 Aligned_cols=64 Identities=19% Similarity=0.371 Sum_probs=59.0
Q ss_pred CCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcH--HHHHHHHHHHHHhhhcCCccccccc
Q 022539 3 VDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQ--QAEAKFKLISEAYDVLSDPRKRQIY 66 (295)
Q Consensus 3 ~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~--~~~~~f~~i~~Ay~~L~d~~~r~~y 66 (295)
.|||++|||+++|+.++||+|||+|+++||||+++.... .|.+.|+.|++||++|+|+.+|+.|
T Consensus 117 ~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y 182 (182)
T 1n4c_A 117 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY 182 (182)
T ss_dssp CCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred cchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence 589999999999999999999999999999999975422 2889999999999999999999987
No 32
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.69 E-value=3.4e-18 Score=143.07 Aligned_cols=67 Identities=25% Similarity=0.406 Sum_probs=61.0
Q ss_pred CccceecCCCCC--CHHHHHHHHHHHHHHhCCCCCCCCcH----HHHHHHHHHHHHhhhcCCccccccccCCC
Q 022539 4 DYYNILKVSRGA--TEDDLKKSYKRLAMKWHPDKNPATNQ----QAEAKFKLISEAYDVLSDPRKRQIYDLYG 70 (295)
Q Consensus 4 d~Y~iLgv~~~a--~~~eIk~ayr~la~~~hPd~~~~~~~----~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g 70 (295)
|||++|||++++ |.++||+|||+|+++||||++++..+ .|.+.|+.|++||++|+||.+|+.||...
T Consensus 2 d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l 74 (171)
T 1fpo_A 2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSL 74 (171)
T ss_dssp HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHT
T ss_pred CHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHh
Confidence 899999999999 99999999999999999999986432 36689999999999999999999999853
No 33
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.69 E-value=5e-18 Score=142.48 Aligned_cols=67 Identities=24% Similarity=0.478 Sum_probs=60.7
Q ss_pred CCCccceecCCCCCC--HHHHHHHHHHHHHHhCCCCCCCCcH----HHHHHHHHHHHHhhhcCCccccccccC
Q 022539 2 GVDYYNILKVSRGAT--EDDLKKSYKRLAMKWHPDKNPATNQ----QAEAKFKLISEAYDVLSDPRKRQIYDL 68 (295)
Q Consensus 2 ~~d~Y~iLgv~~~a~--~~eIk~ayr~la~~~hPd~~~~~~~----~~~~~f~~i~~Ay~~L~d~~~r~~yd~ 68 (295)
..|||+||||+++++ .++||+|||+|+++||||++++... .+.+.|+.|++||++|+||.+|+.||.
T Consensus 3 ~~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~ 75 (174)
T 3hho_A 3 AMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRAEYLL 75 (174)
T ss_dssp -CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred CCCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHH
Confidence 479999999999998 9999999999999999999976532 267899999999999999999999997
No 34
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.69 E-value=5.6e-18 Score=130.61 Aligned_cols=60 Identities=27% Similarity=0.417 Sum_probs=52.5
Q ss_pred CCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCC--c----HHHHHHHHHHHHHhhhcCCccc
Q 022539 2 GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPAT--N----QQAEAKFKLISEAYDVLSDPRK 62 (295)
Q Consensus 2 ~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~--~----~~~~~~f~~i~~Ay~~L~d~~~ 62 (295)
+.|||+||+++. ||.++||+|||++|++||||+|++. . ..|.++|++|++||++|+|+..
T Consensus 40 ~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~~ 105 (106)
T 3ag7_A 40 GSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLGP 105 (106)
T ss_dssp TSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred cCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCccc
Confidence 469999999996 9999999999999999999998631 1 1478999999999999999763
No 35
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.69 E-value=5.9e-18 Score=126.66 Aligned_cols=57 Identities=19% Similarity=0.317 Sum_probs=51.6
Q ss_pred CCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCc--HHHHHHHHHHHHHhhhcCC
Q 022539 3 VDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATN--QQAEAKFKLISEAYDVLSD 59 (295)
Q Consensus 3 ~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~--~~~~~~f~~i~~Ay~~L~d 59 (295)
.++|++|||+++||.+|||+|||++|++||||+|+++. ..|+++|++|++||++|.+
T Consensus 33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence 48999999999999999999999999999999998642 2488899999999999975
No 36
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.67 E-value=1.2e-17 Score=143.64 Aligned_cols=67 Identities=27% Similarity=0.488 Sum_probs=60.0
Q ss_pred CCCccceecCCCC--CCHHHHHHHHHHHHHHhCCCCCCCCc----HHHHHHHHHHHHHhhhcCCccccccccC
Q 022539 2 GVDYYNILKVSRG--ATEDDLKKSYKRLAMKWHPDKNPATN----QQAEAKFKLISEAYDVLSDPRKRQIYDL 68 (295)
Q Consensus 2 ~~d~Y~iLgv~~~--a~~~eIk~ayr~la~~~hPd~~~~~~----~~~~~~f~~i~~Ay~~L~d~~~r~~yd~ 68 (295)
..|||+||||+++ ++.++||+|||+|+++||||++++.. ..|.++|+.|++||++|+||.+|+.||.
T Consensus 42 ~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd~ 114 (207)
T 3bvo_A 42 TRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLL 114 (207)
T ss_dssp TCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence 4699999999986 79999999999999999999997542 2367899999999999999999999995
No 37
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.65 E-value=3.9e-17 Score=116.99 Aligned_cols=57 Identities=25% Similarity=0.316 Sum_probs=51.6
Q ss_pred CCccceecCCC-CCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccc
Q 022539 3 VDYYNILKVSR-GATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQ 64 (295)
Q Consensus 3 ~d~Y~iLgv~~-~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~ 64 (295)
.++|+||||++ +|+.++||+|||+|+++||||++.+ .+.|++|++||++|+++..|.
T Consensus 14 ~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g~-----~~~f~~i~~Aye~L~~~~~rk 71 (71)
T 2guz_A 14 KEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGGS-----PFLATKINEAKDFLEKRGISK 71 (71)
T ss_dssp HHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTCC-----HHHHHHHHHHHHHHHHHCCCC
T ss_pred HHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC-----HHHHHHHHHHHHHHhhhhhcC
Confidence 48999999999 7999999999999999999999753 469999999999999987663
No 38
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.63 E-value=1.5e-17 Score=169.14 Aligned_cols=76 Identities=39% Similarity=0.760 Sum_probs=40.9
Q ss_pred CCCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCcc
Q 022539 1 MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKAS 77 (295)
Q Consensus 1 m~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~ 77 (295)
+..|||+||||+++||.+|||+|||+||++||||+++.+ +++.++|++|++||++|+||.+|+.||+||++++..+
T Consensus 19 ~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~-~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~~~~~ 94 (780)
T 3apo_A 19 HDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNN-PNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLEDN 94 (780)
T ss_dssp ----CHHHHTCCTTCCHHHHHHHHCC------------------------CTHHHHHHSHHHHHHHTTC--------
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCC-hHHHHHHHHHHHHHHHHcChHHHHHHHhhcccccccC
Confidence 357999999999999999999999999999999999754 4688999999999999999999999999999888754
No 39
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.62 E-value=3.8e-17 Score=137.72 Aligned_cols=63 Identities=27% Similarity=0.554 Sum_probs=58.1
Q ss_pred CCCcccee------cCCC-CCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccC
Q 022539 2 GVDYYNIL------KVSR-GATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDL 68 (295)
Q Consensus 2 ~~d~Y~iL------gv~~-~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~ 68 (295)
..|||+|| |+++ +||.++||+|||+|+++||||++++ +.+.|+.|++||++|+||.+|+.||.
T Consensus 10 ~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~----a~~~f~~i~~AY~vL~dp~~R~~Yd~ 79 (181)
T 3uo3_A 10 TSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ----GSEQSSTLNQAYHTLKDPLRRSQYML 79 (181)
T ss_dssp SCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCS----CSSGGGSHHHHHHHHHSHHHHHHHHH
T ss_pred CCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCcc----HHHHHHHHHHHHHHHcChHHHHHHHH
Confidence 47999999 4765 9999999999999999999999975 46799999999999999999999998
No 40
>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}
Probab=99.21 E-value=1.6e-11 Score=94.86 Aligned_cols=75 Identities=17% Similarity=0.134 Sum_probs=64.6
Q ss_pred CCCCCeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCCCcCCCeEecCCCCCCCCCCCCccEEEEE
Q 022539 112 PTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQEPGLPPADLIFVV 191 (295)
Q Consensus 112 ~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDliv~i 191 (295)
+.|.|+.+++.|||.||+.|++++|... +| .++|.||+|+++|++++++|+|.+..+ .+|||+|++
T Consensus 9 R~G~DL~~~~~Isl~eAl~G~~i~v~tl------dG-------~~~v~ip~g~~~G~~~rl~G~G~p~~~-~~GDL~v~~ 74 (109)
T 3i38_A 9 IVGHNLEIVLPLAPWEAALGAKVTVPTL------KE-------SILLTVPPGSQAGQRLRIKGKGLVSKT-HTGDLFAVI 74 (109)
T ss_dssp EETTEEEEEEEECHHHHHHCEEEEECCS------SS-------CEEEEECTTCCTTCEEEETTCSCBCSS-CBCCEEEEE
T ss_pred EECCEEEEEEEcCHHHHhCCCEEEEEcC------CC-------CEEEeeCCCcCcCeEEEECCccCCCCC-CCcCEEEEE
Confidence 4578999999999999999998877764 55 478999999999999999999998744 789999999
Q ss_pred EEeCCccee
Q 022539 192 EEKPHAVFQ 200 (295)
Q Consensus 192 ~v~~h~~f~ 200 (295)
+|.-.....
T Consensus 75 ~V~~P~~Ls 83 (109)
T 3i38_A 75 KIVMPTKPD 83 (109)
T ss_dssp EECCCSSCC
T ss_pred EEECCCCCC
Confidence 998665443
No 41
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.09 E-value=5.3e-11 Score=110.72 Aligned_cols=66 Identities=44% Similarity=0.772 Sum_probs=56.7
Q ss_pred CCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCc--HHHHHHHHHHHHHhhhcCCccccccccC
Q 022539 3 VDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATN--QQAEAKFKLISEAYDVLSDPRKRQIYDL 68 (295)
Q Consensus 3 ~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~--~~~~~~f~~i~~Ay~~L~d~~~r~~yd~ 68 (295)
.++|.+||+.+.++.++|+++|+++++++|||+.+.+. ..+.+.|+.|++||++|+|+.+|+.||.
T Consensus 382 ~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~ 449 (450)
T 2y4t_A 382 RDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDD 449 (450)
T ss_dssp CCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC-----
T ss_pred hhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccC
Confidence 48999999999999999999999999999999997643 4588999999999999999999999996
No 42
>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}
Probab=99.08 E-value=1.7e-10 Score=90.76 Aligned_cols=75 Identities=20% Similarity=0.174 Sum_probs=62.1
Q ss_pred CCCCCeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCC--CcCCCeEecCCCCCCCCCC-CCccEE
Q 022539 112 PTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPG--WKKGTKITFPEKGNQEPGL-PPADLI 188 (295)
Q Consensus 112 ~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G--~~~G~~i~~~g~G~~~~~~-~~GDli 188 (295)
++|.|+.+++.|||.||+.|++++|... +|+ .++|.||+| +++|++++++|+|.+..+. ..|||+
T Consensus 4 R~G~DL~~~~~Isl~eAllG~~i~v~tl------dG~------~~~v~ip~g~v~~~G~~~rl~G~Gmp~~~~~~~GDL~ 71 (121)
T 1xao_A 4 RDGDDLVYEAEIDLLTAIAGGEFALEHV------SGD------WLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLI 71 (121)
T ss_dssp EETTEEEEEEEEEHHHHHHCEEEEEECT------TSC------EEEEEECTTSCCCTTCEEEETTCSCC------CCCEE
T ss_pred EECCeEEEEEEcCHHHHhCCCEEEEecC------CCC------EEEEEeCCCCeeCCCcEEEECCCCCCCCCCCCCCCEE
Confidence 4578999999999999999998887654 663 689999999 9999999999999986433 689999
Q ss_pred EEEEEeCCcc
Q 022539 189 FVVEEKPHAV 198 (295)
Q Consensus 189 v~i~v~~h~~ 198 (295)
|++.+.-+..
T Consensus 72 V~~~V~~P~~ 81 (121)
T 1xao_A 72 IKFTIKFPEN 81 (121)
T ss_dssp EEEEEECCCT
T ss_pred EEEEEECCCC
Confidence 9999997654
No 43
>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}
Probab=98.94 E-value=2.6e-09 Score=89.76 Aligned_cols=75 Identities=15% Similarity=0.199 Sum_probs=63.3
Q ss_pred CCceEEEEEecHHHHhcCCEEEEecc-----------CCcEEEEeeCCCCCCCcEEEEcCCCcC-CCCCCCCCCCEEEEE
Q 022539 203 GNDLVVNHKISLLEALTGLSLNLTAL-----------DGRNLTLPVTDIIQPGSEVVIPNEGMP-ISKDPSKKGNLIIKF 270 (295)
Q Consensus 203 g~DL~~~~~I~l~~Al~G~~~~i~~l-----------~g~~i~v~i~~~~~~g~~~rl~g~G~p-~~~~~~~~GDL~v~~ 270 (295)
|.|+.+++.|||.||+.|++++|... ..++++|+||+++.+|+++|++|+|-+ ..+ +..|||||.+
T Consensus 3 g~d~~~~l~islee~~~G~~k~i~~~~~~~c~~g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~g~~g--g~~GDl~v~i 80 (180)
T 2q2g_A 3 PRSHEVPLLVTLEELYLGKRKKIKVTRKRFIEHKVRNEENIVEVEIKPGWKDGTKLTYSGEGDQESPG--TSPGDLVLII 80 (180)
T ss_dssp -CEEEEEEEECHHHHHHCEEEEEEEEEEEEETTEEEEEEEEEEEEECTTCCTTCEEEETTCSCCSSTT--SCCCEEEEEE
T ss_pred CCCEEEEEEeeHHHhcCCcEEEEEEeEEEecCCceEEeeEEEEEEECCCCcCCcEEEEeeccCCCCCC--CccccEEEEE
Confidence 78999999999999999998887643 246799999999999999999999987 333 5789999999
Q ss_pred EEECCCCCC
Q 022539 271 DIMFPSRLT 279 (295)
Q Consensus 271 ~v~~P~~l~ 279 (295)
++.-.+.+.
T Consensus 81 ~~~~h~~F~ 89 (180)
T 2q2g_A 81 QTKTHPRFT 89 (180)
T ss_dssp EECCCSSCE
T ss_pred EEEecccEE
Confidence 998766554
No 44
>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A
Probab=98.92 E-value=3.1e-09 Score=88.48 Aligned_cols=75 Identities=13% Similarity=0.204 Sum_probs=62.9
Q ss_pred CceEEEEEecHHHHhcCCEEEEecc----CC----cEEEEeeCCCCCCCcEEEEcCCCcCCCCCCCCCCCEEEEEEEECC
Q 022539 204 NDLVVNHKISLLEALTGLSLNLTAL----DG----RNLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMFP 275 (295)
Q Consensus 204 ~DL~~~~~I~l~~Al~G~~~~i~~l----~g----~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GDL~v~~~v~~P 275 (295)
.|+.+++.|||.||+.|++++|... .| ++++|+||+++.+|+++|++|+|-+... .+..|||||++++.-+
T Consensus 1 ~d~~~~l~islee~~~G~~k~i~~~~~~~~G~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~-gg~~GDl~v~i~v~~h 79 (170)
T 1c3g_A 1 ETVQVNLPVSLEDLFVGKKKSFKIGRKGPHGASEKTQIDIQLKPGWKAGTKITYKNQGDYNPQ-TGRRKTLQFVIQEKSH 79 (170)
T ss_dssp CEEEEEEEECHHHHHHTCEEEEEEEEEETTTEEEEEEEEEECCTTCCTTCEEEESSCSSBCSS-SSCBCEEEEEEEECCC
T ss_pred CCEEEEEEeEHHHhhCCcEEEEEEEEecCCCcEEeEEEEEEeCCCccCCCEEEEeccccCCCC-CCccccEEEEEEEccC
Confidence 3899999999999999999888653 23 6799999999999999999999986443 3578999999999876
Q ss_pred CCCC
Q 022539 276 SRLT 279 (295)
Q Consensus 276 ~~l~ 279 (295)
+.+.
T Consensus 80 ~~F~ 83 (170)
T 1c3g_A 80 PNFK 83 (170)
T ss_dssp SSEE
T ss_pred CccE
Confidence 6543
No 45
>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A
Probab=98.89 E-value=5.8e-09 Score=87.70 Aligned_cols=75 Identities=19% Similarity=0.296 Sum_probs=61.0
Q ss_pred CCceEEEEEecHHHHhcCCEEEEec------cCC-------cEEEEeeCCCCCCCcEEEEcCCCcCCCCCCCCCCCEEEE
Q 022539 203 GNDLVVNHKISLLEALTGLSLNLTA------LDG-------RNLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIK 269 (295)
Q Consensus 203 g~DL~~~~~I~l~~Al~G~~~~i~~------l~g-------~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GDL~v~ 269 (295)
|.|+.+++.|||.||+.|++++|.. ..| ++++|+||+++.+|+++|++|+|-+..+ +..|||||.
T Consensus 2 ~~d~~~~l~islee~~~G~~k~i~i~~~c~~c~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~G~G~~~~~--g~~GDl~v~ 79 (181)
T 3agx_A 2 DPPVTHDLRVSLEEIYSGCTKKMKISHKRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSN--NIPADIVFV 79 (181)
T ss_dssp ----CEEEEECHHHHHHCEEEEEEEEEEEECTTSSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCSS--SCCCCEEEE
T ss_pred CCCEEEEEEEEHHHhcCCcEEEEEEecccCCCCCceEEEEeEEEEEEECCCccCCcEEEEeeccccCCC--CCcccEEEE
Confidence 5689999999999999999877753 234 5789999999999999999999998664 578999999
Q ss_pred EEEECCCCCC
Q 022539 270 FDIMFPSRLT 279 (295)
Q Consensus 270 ~~v~~P~~l~ 279 (295)
+++.-++.+.
T Consensus 80 i~~~~h~~F~ 89 (181)
T 3agx_A 80 LKDKPHNIFK 89 (181)
T ss_dssp EEECCCSSCE
T ss_pred EEEeccccce
Confidence 9998766554
No 46
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.86 E-value=1.5e-09 Score=75.56 Aligned_cols=50 Identities=14% Similarity=0.074 Sum_probs=44.7
Q ss_pred ccceecCCCC---CCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCC
Q 022539 5 YYNILKVSRG---ATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSD 59 (295)
Q Consensus 5 ~Y~iLgv~~~---a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d 59 (295)
=|.||||+++ ++.++|+++||+|....|||+..+ ...+.+|++|++.|..
T Consensus 6 A~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGGS-----~yl~~ki~~Ake~l~~ 58 (65)
T 2guz_B 6 SCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGGS-----FYLQSKVYRAAERLKW 58 (65)
T ss_dssp HHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTCC-----HHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCCC-----HHHHHHHHHHHHHHHH
Confidence 4789999999 999999999999999999999854 5778899999999864
No 47
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=98.81 E-value=5.7e-09 Score=95.63 Aligned_cols=77 Identities=17% Similarity=0.253 Sum_probs=62.2
Q ss_pred ecCCceEEEEEecHHHHhcCCEEEEecc------C-------CcEEEEeeCCCCCCCcEEEEcCCCcCCCCCCCCCCCEE
Q 022539 201 RDGNDLVVNHKISLLEALTGLSLNLTAL------D-------GRNLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLI 267 (295)
Q Consensus 201 r~g~DL~~~~~I~l~~Al~G~~~~i~~l------~-------g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GDL~ 267 (295)
+.|.||.+++.|+|.||+.|+++.|... . .++++|+||+++++|++||++|+|.|... .+..||||
T Consensus 138 ~~g~Dl~~~l~vsleea~~G~~k~i~i~~~v~~g~G~v~~~~~~~l~V~IP~Gv~~G~~Irl~G~G~~g~~-gg~~GDL~ 216 (329)
T 3lz8_A 138 ARGHDLEIEVAVFLEETLAEQTRTISYNLPVYNVFGMIESETPKTLNVKIPAGVVDGQRIRLKGQGTPGEN-GGPNGDLW 216 (329)
T ss_dssp CCCCCEEEEECCCTTGGGSCEEEEEEEEEEECCSCC-CCEEEEEEEEEEECTTCCTTCEEEESSCSCCC----CCCCCEE
T ss_pred CCCCCEEEEEecchhhhhhccceEEEEEEEeecCCeEEEEecceEEEEeCCCCCCCCCEEEEcccccCCCC-CCCCCcEE
Confidence 4688999999999999999987666543 2 24688999999999999999999998654 35689999
Q ss_pred EEEEEECCCCC
Q 022539 268 IKFDIMFPSRL 278 (295)
Q Consensus 268 v~~~v~~P~~l 278 (295)
|+|+|.-.+.+
T Consensus 217 v~I~v~~h~~F 227 (329)
T 3lz8_A 217 LVIHIAPHPLF 227 (329)
T ss_dssp EEECCCCCSSC
T ss_pred EEEEEecCCcc
Confidence 99998876654
No 48
>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1
Probab=98.70 E-value=1.3e-08 Score=89.66 Aligned_cols=76 Identities=21% Similarity=0.199 Sum_probs=64.6
Q ss_pred CCCCCCeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCC--CcCCCeEecCCCCCCCCCC-CCccE
Q 022539 111 KPTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPG--WKKGTKITFPEKGNQEPGL-PPADL 187 (295)
Q Consensus 111 ~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G--~~~G~~i~~~g~G~~~~~~-~~GDl 187 (295)
.+.+.|++++++|||.||+.|++++|... +|+ .++|.|||| +++|++++++|+|.+..+. ..|||
T Consensus 158 ~R~G~DL~~~~~Isl~eAllG~~i~v~tl------dG~------~~~i~ip~g~vt~~g~~~rl~g~Gmp~~~~~~~GDL 225 (248)
T 1nlt_A 158 KRDGDDLVYEAEIDLLTAIAGGEFALEHV------SGD------WLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNL 225 (248)
T ss_dssp EEETTEEEEEEEEEHHHHHHCBCCEEECS------SSC------EEECCBCTTTTCSTTCEEEETTCSCBCSSSCSBCCE
T ss_pred eeeCCEEEEEEEeCHHHHhcCCEEEEeCC------CCC------EEEEEeCCCCeeCCCeEEEEcCCCCccCCCCCcCCE
Confidence 35688999999999999999999888765 662 589999999 9999999999999986432 67999
Q ss_pred EEEEEEeCCcc
Q 022539 188 IFVVEEKPHAV 198 (295)
Q Consensus 188 iv~i~v~~h~~ 198 (295)
||+|.|.-+..
T Consensus 226 ~V~~~V~~P~~ 236 (248)
T 1nlt_A 226 IIKFTIKDPEN 236 (248)
T ss_dssp EEEEEEECCC-
T ss_pred EEEEEEECCCC
Confidence 99999996654
No 49
>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.96 E-value=0.0034 Score=47.31 Aligned_cols=30 Identities=13% Similarity=0.161 Sum_probs=26.7
Q ss_pred CCCeeeecccCHHHHhcCceeEEEEeEEee
Q 022539 114 PTPIETQLLCTLEELYKGARKKMKISRVLP 143 (295)
Q Consensus 114 ~~di~~~l~itl~e~~~G~~k~i~~~r~~~ 143 (295)
++++.+.|.|||+|||+|++++|.+.+.+.
T Consensus 1 ~~~~~~~l~vslee~~~G~~~~i~~~~~~~ 30 (104)
T 2ctt_A 1 GSSGSSGMELTFNQAAKGVNKEFTVNIMDT 30 (104)
T ss_dssp CCCCCCCCCCCCSSCCSSSCTTCCSSCCEE
T ss_pred CCceEEEEEEEHHHHcCCCEEEEEeeeeeE
Confidence 357889999999999999999999988765
No 50
>2cqn_A Formin-binding protein 3; FF domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.159.2.1
Probab=33.08 E-value=23 Score=24.55 Aligned_cols=55 Identities=9% Similarity=0.201 Sum_probs=38.7
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCCCCc-HHHHHHHHHHHHHhhhcCCc-cccccccCCC
Q 022539 15 ATEDDLKKSYKRLAMKWHPDKNPATN-QQAEAKFKLISEAYDVLSDP-RKRQIYDLYG 70 (295)
Q Consensus 15 a~~~eIk~ayr~la~~~hPd~~~~~~-~~~~~~f~~i~~Ay~~L~d~-~~r~~yd~~g 70 (295)
.-...++.+|+.+.+...|....... +.+...|..-. +|..+.++ .++.+|+.|-
T Consensus 6 ~r~rrl~~~F~~mLk~~~p~I~~~s~We~vr~~~e~~~-~fkav~~E~eR~~lFeeYi 62 (77)
T 2cqn_A 6 SGMKRKESAFKSMLKQAAPPIELDAVWEDIRERFVKEP-AFEDITLESERKRIFKDFM 62 (77)
T ss_dssp CSHHHHHHHHHHHHHTCSSCCCTTCCHHHHHHHHTTSH-HHHTCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHccCH-HHHhcCCHHHHHHHHHHHH
Confidence 34567889999999888888776542 34555665544 79988764 6777787753
No 51
>2pi2_E Replication protein A 14 kDa subunit; FULL-length RPA14/32, ssDNA binding protein, OB-fold, dioxan replication, DNA binding protein; 2.00A {Homo sapiens} SCOP: b.40.4.3 PDB: 2pqa_B 2z6k_C
Probab=29.49 E-value=2e+02 Score=22.27 Aligned_cols=64 Identities=14% Similarity=0.142 Sum_probs=48.1
Q ss_pred cCCEEEEeccCCcEEEEeeCC--CCCCCcEEEEcCCCcCCCCCCCCCCCEEEEEEEECCCC---CCHHHHHHHHHH
Q 022539 219 TGLSLNLTALDGRNLTLPVTD--IIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMFPSR---LTAEQKSDLKRA 289 (295)
Q Consensus 219 ~G~~~~i~~l~g~~i~v~i~~--~~~~g~~~rl~g~G~p~~~~~~~~GDL~v~~~v~~P~~---l~~~~~~~l~~~ 289 (295)
.|.++.+.+.||..++|..++ ....+..+-+-|+--+ .+-+...--+.|.+. ++.+..+.+-++
T Consensus 58 ~G~~~~l~s~Dg~~VtV~l~~pL~~~~~~~VEViG~V~~-------~~tI~~~~~~~fGd~~~~fD~~~yn~lv~l 126 (142)
T 2pi2_E 58 TGKMFILSDGEGKNGTIELMEPLDEEISGIVEVVGRVTA-------KATILCTSYVQFKEDSHPFDLGLYNEAVKI 126 (142)
T ss_dssp TSSEEEEECTTSCEEEEECSSCCSSCCCSEEEEEEEECT-------TSCEEEEEEEECCCSSSCCCHHHHHHHHHH
T ss_pred CCCEEEEEeCCCcEEEEEeCCCCCccCCCEEEEEEEECC-------CCcEEEEEEEecCCCccccCHHHHHHHHHH
Confidence 678899999999989998865 3466778888887432 356777777899887 887776665554
No 52
>1ny9_A Transcriptional activator TIPA-S; all alpha, globin like; NMR {Streptomyces lividans} SCOP: a.181.1.1
Probab=28.49 E-value=70 Score=24.41 Aligned_cols=45 Identities=22% Similarity=0.158 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCC
Q 022539 18 DDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGP 71 (295)
Q Consensus 18 ~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~ 71 (295)
.++-+.++.+...+.++.+ .+.|..|.+-|. .||.-+..||++|.
T Consensus 80 q~l~~~h~~~l~~~~~~~s-------~e~~~~L~~mYv--~D~rF~~~~d~~~~ 124 (143)
T 1ny9_A 80 MDAAEDHRQGIARNHYDCG-------YEMHTCLGEMYV--SDERFTRNIDAAKP 124 (143)
T ss_dssp HHHHHHHHHHHHHHSSCCC-------HHHHHHHHHHTT--STHHHHHHHGGGST
T ss_pred HHHHHHHHHHHHHhCCCCC-------HHHHHHHHHHHh--cCHHHHHhHcccCh
Confidence 3444555555444444443 356666766664 78888999998764
No 53
>1i11_A Transcription factor SOX-5; HMG BOX, DNA bending, DNA recognition, chromatin, DNA binding protein, DNA sequence specific, testis determining.; NMR {Mus musculus} SCOP: a.21.1.1
Probab=25.34 E-value=78 Score=21.46 Aligned_cols=41 Identities=17% Similarity=0.366 Sum_probs=29.7
Q ss_pred HHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCcccccccc
Q 022539 21 KKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYD 67 (295)
Q Consensus 21 k~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd 67 (295)
.+.+|...+.-||+.+ ..+..+.|.+.|..|++.++...++
T Consensus 16 ~~~~r~~~~~~~p~~~------~~eisk~lg~~Wk~ls~eeK~~y~~ 56 (81)
T 1i11_A 16 AKDERRKILQAFPDMH------NSNISKILGSRWKAMTNLEKQPYYE 56 (81)
T ss_dssp HHHHHHHHHTTCSSCC------HHHHHHHHHHHHTTSCSGGGHHHHH
T ss_pred HHHHHHHHHHHCCCCC------HHHHHHHHHhhhhhCCHHHHHHHHH
Confidence 3456666666788765 3578889999999999877765444
No 54
>2xzz_A Protein-glutamine gamma-glutamyltransferase K; 2.30A {Homo sapiens}
Probab=25.17 E-value=1.9e+02 Score=20.87 Aligned_cols=66 Identities=23% Similarity=0.248 Sum_probs=45.2
Q ss_pred ecCCceEEEEEe--cHHHHhcCCEEEEecc--CCcEEEEeeCCCCCCCcEEEEcCCCcCCCCCCCCCCCEEEEEE
Q 022539 201 RDGNDLVVNHKI--SLLEALTGLSLNLTAL--DGRNLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFD 271 (295)
Q Consensus 201 r~g~DL~~~~~I--~l~~Al~G~~~~i~~l--~g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GDL~v~~~ 271 (295)
..|..+.+++.. +|.++|.+|.+.|+.. ... ..+.++. +.||+..+..-+=.|... ..--|++.|.
T Consensus 17 ~v~~~l~v~vsf~NPL~~~L~~c~~~vEG~GL~~~-~~~~~~~-v~pg~~~~~~~~~~P~~~---G~~~L~a~f~ 86 (102)
T 2xzz_A 17 VVGQECEVQIVFKNPLPVTLTNVVFRLEGSGLQRP-KILNVGD-IGGNETVTLRQSFVPVRP---GPRQLIASLD 86 (102)
T ss_dssp CSSSCEEEEEEEECCSSSCBCSEEEEEEETTTEEE-EEEEECC-BCTTCEEEEEEEECCCSC---SSCCCEEEEE
T ss_pred ccCCeEEEEEEEECCCCCcccCEEEEEECCCCCcc-eEEEcCc-CCCCCEEEEEEEEecCcc---cceEEEEEEE
Confidence 346666666544 7889999999888874 223 5677754 899999998877666543 2344666664
No 55
>2hcz_X Beta-expansin 1A; domain 1 is A beta barrel and domain 2 is A immunoglobulin L sandwich, allergen; HET: NAG MAN FCA; 2.75A {Zea mays}
Probab=25.16 E-value=1.8e+02 Score=24.57 Aligned_cols=103 Identities=16% Similarity=0.229 Sum_probs=55.1
Q ss_pred cCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCCCcCC-CeEecCCCCCCCCCCCCccEEEEEEEeCCc--cee---ec-
Q 022539 130 KGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKG-TKITFPEKGNQEPGLPPADLIFVVEEKPHA--VFQ---RD- 202 (295)
Q Consensus 130 ~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G-~~i~~~g~G~~~~~~~~GDliv~i~v~~h~--~f~---r~- 202 (295)
......|.+.|-.|.-.| ...+.+.|..|..+. ..|.+...+. .+| |..|+++... .|. |.
T Consensus 127 ~~Gii~V~yrrV~C~~~g-----g~ni~f~v~~Gs~~~~~avlv~n~~g------~g~-V~~V~ik~~~~~~W~~m~r~~ 194 (245)
T 2hcz_X 127 HCGIMDVEFRRVRCKYPA-----GQKIVFHIEKGCNPNYLAVLVKYVAD------DGD-IVLMEIQDKLSAEWKPMKLSW 194 (245)
T ss_dssp TTCCEEEEEEEECCCCST-----TCCCEEEECCCCSSSCCCEEEECCCT------TCC-EEEEEBCCSSSCSCBCCEEEE
T ss_pred cCCEEEEEEEEEecCCCC-----CCcEEEEEcCCCCcceEEEEEEecCC------CCC-EEEEEEEeCCCCceeECccCC
Confidence 344566666654443221 014666776654433 2344444321 133 5677777663 333 32
Q ss_pred CCceEEEEEecHHHHhcC-CEEEEeccCCcEEEEe--eCCCCCCCcEEE
Q 022539 203 GNDLVVNHKISLLEALTG-LSLNLTALDGRNLTLP--VTDIIQPGSEVV 248 (295)
Q Consensus 203 g~DL~~~~~I~l~~Al~G-~~~~i~~l~g~~i~v~--i~~~~~~g~~~r 248 (295)
|+ .+ ...-. -.|.| .++.|.+.+|+++... +|+.-++|+...
T Consensus 195 G~-~W-~~~~~--~~l~gpls~RvT~~~G~~v~~~nViP~~w~~g~ty~ 239 (245)
T 2hcz_X 195 GA-IW-RMDTA--KALKGPFSIRLTSESGKKVIAKDVIPANWRPDAVYT 239 (245)
T ss_dssp TT-EE-ECSCC--SSCCSSCCEEEEETTSCEEEESCSCCSSCCTTCEEE
T ss_pred CC-EE-EECCC--CCCCCCEEEEEEEeCCcEEEEeeeecCCCCCCCEEe
Confidence 33 21 21111 11333 5789999999987776 677778888764
No 56
>4a3n_A Transcription factor SOX-17; 2.40A {Homo sapiens} SCOP: a.21.1.0
Probab=23.91 E-value=46 Score=21.84 Aligned_cols=40 Identities=18% Similarity=0.286 Sum_probs=28.9
Q ss_pred HHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccc
Q 022539 21 KKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIY 66 (295)
Q Consensus 21 k~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~y 66 (295)
.+.+|...+.-||+.. ..+..+.+.+.|..|++.++....
T Consensus 14 ~~~~r~~~~~~~p~~~------~~eisk~lg~~Wk~ls~~eK~~y~ 53 (71)
T 4a3n_A 14 AKDERKRLAQQNPDLH------NAELSKMLGKSWKALTLAEKRPFV 53 (71)
T ss_dssp HHHHHHHHHTTCTTSC------HHHHHHHHHHHHHHSCHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCC------HHHHHHHHHHHHhcCCHHHHHHHH
Confidence 4566777777888876 357788889999999877665433
No 57
>1qqr_A Streptokinase domain B; non-proteolytic, plasminogen activation, fibrinolysis, hydrolase activator; 2.30A {Streptococcus dysgalactiae subsp} SCOP: d.15.5.1 PDB: 1c4p_A
Probab=23.56 E-value=44 Score=25.84 Aligned_cols=31 Identities=19% Similarity=0.252 Sum_probs=25.6
Q ss_pred cceecCCCCCCHHHHHHHHHHHHHHhCCCCC
Q 022539 6 YNILKVSRGATEDDLKKSYKRLAMKWHPDKN 36 (295)
Q Consensus 6 Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~ 36 (295)
+..|-|....+.+|++++-..+..++||+-.
T Consensus 35 l~~k~ig~~Its~eL~~~AqeiL~q~hp~Y~ 65 (138)
T 1qqr_A 35 LKTLAIGDTITSQELLAQAQSILNKNHPGYT 65 (138)
T ss_dssp EEEECTTCEEEHHHHHHHHHHHHHHHSTTEE
T ss_pred hcccccCcccCHHHHHHHHHHHHHhcCCCcE
Confidence 5667777788999999999999999999743
No 58
>1uzc_A Hypothetical protein FLJ21157; nuclear protein, structure, transcription, phosphopeptide recognition, RNA polymerase II carboxyl- terminal domain; NMR {Homo sapiens} SCOP: a.159.2.1 PDB: 2kzg_A 2lks_A 2l9v_A
Probab=22.73 E-value=92 Score=21.10 Aligned_cols=52 Identities=25% Similarity=0.404 Sum_probs=31.8
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH--HHhhhcCCc-cccccccCC
Q 022539 14 GATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLIS--EAYDVLSDP-RKRQIYDLY 69 (295)
Q Consensus 14 ~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~--~Ay~~L~d~-~~r~~yd~~ 69 (295)
-+|.+|.+++|++|...++-+-. . .. ++..+.|. .-|.+|.++ .+++.|+.|
T Consensus 11 ~~t~eea~~~F~~LL~e~~V~~~--~-tW-e~~~~~i~~DpRY~al~~~~eRk~~F~ey 65 (71)
T 1uzc_A 11 WNTKEEAKQAFKELLKEKRVPSN--A-SW-EQAMKMIINDPRYSALAKLSEKKQAFNAY 65 (71)
T ss_dssp CCSHHHHHHHHHHHHHHTTCCTT--C-CH-HHHHHHHHTSGGGGGCSSHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHcCcCCC--C-CH-HHHHHHHccCccccccCCHHHHHHHHHHH
Confidence 57899999999999988753332 2 11 12222332 367778764 456666654
No 59
>1msz_A DNA-binding protein smubp-2; R3H fold; NMR {Homo sapiens} SCOP: d.68.7.1
Probab=22.25 E-value=48 Score=23.58 Aligned_cols=20 Identities=15% Similarity=0.428 Sum_probs=17.1
Q ss_pred EEECCCCCCHHHHHHHHHHh
Q 022539 271 DIMFPSRLTAEQKSDLKRAL 290 (295)
Q Consensus 271 ~v~~P~~l~~~~~~~l~~~l 290 (295)
.+.||..|++.+|..+-++.
T Consensus 35 ~l~FP~sLs~~eR~~IH~lA 54 (86)
T 1msz_A 35 QLEFPPSLNSHDRLRVHQIA 54 (86)
T ss_dssp EEEECTTCCSHHHHHHHHHH
T ss_pred EEEcCCCCCHHHHHHHHHHH
Confidence 68899999999999887764
No 60
>3zxf_A Galectin-7; sugar binding protein; 1.38A {Homo sapiens} SCOP: b.29.1.3 PDB: 1bkz_A 2gal_A* 3gal_A* 4gal_A* 5gal_A* 3zxe_A*
Probab=22.23 E-value=1.4e+02 Score=22.64 Aligned_cols=44 Identities=14% Similarity=0.215 Sum_probs=31.3
Q ss_pred EEEeeCCCCCCCcEEEEcCCCcCCCCC--------CCCCCCEEEEEEEECCC
Q 022539 233 LTLPVTDIIQPGSEVVIPNEGMPISKD--------PSKKGNLIIKFDIMFPS 276 (295)
Q Consensus 233 i~v~i~~~~~~g~~~rl~g~G~p~~~~--------~~~~GDL~v~~~v~~P~ 276 (295)
..-.||.+.++|+.++|.|.=.+.... .....|+.++|++.|.+
T Consensus 8 ~~~~i~~gl~~G~~i~I~G~v~~~a~rF~Inl~~g~~~~~dialHfnpRf~~ 59 (138)
T 3zxf_A 8 HKSSLPEGIRPGTVLRIRGLVPPNASRFHVNLLCGEEQGSDAALHFNPRLDT 59 (138)
T ss_dssp EEEECTTCCCSSEEEEEEEEECTTCCBEEEEEESSSSTTCCEEEEEEEETTT
T ss_pred EEeecCCCCCCCCEEEEEEEECCCCCEEEEEeeeCCCCCCCEEEEEEEEcCC
Confidence 455688899999999998864332210 11356999999999875
No 61
>3nm9_A HMG-D, high mobility group protein D; DNA bending, non-sequence-specific, HMG chromosomal protein; HET: DNA; 2.85A {Drosophila melanogaster} SCOP: a.21.1.1 PDB: 1e7j_A* 1hma_A 1qrv_A*
Probab=22.02 E-value=1.3e+02 Score=19.82 Aligned_cols=38 Identities=13% Similarity=0.154 Sum_probs=27.5
Q ss_pred HHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCcccccccc
Q 022539 21 KKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYD 67 (295)
Q Consensus 21 k~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd 67 (295)
.+.+|...+.-||+.. ..+..+.|.+.|..|++ |+.|.
T Consensus 15 ~~~~r~~~~~~~p~~~------~~eisk~lg~~Wk~ls~---K~~y~ 52 (73)
T 3nm9_A 15 LNSARESIKRENPGIK------VTEVAKRGGELWRAMKD---KSEWE 52 (73)
T ss_dssp HHHHHHHHHHHSSSCC------HHHHHHHHHHHHHHCSC---CHHHH
T ss_pred HHHHHHHHHHHCCCCC------HHHHHHHHHHHHHcCCc---hHHHH
Confidence 3456666777889876 35788889999999987 54443
No 62
>1n10_A PHL P I, pollen allergen PHL P 1; plant allergen, expansin, immunoglobulin-like fold, PSI beta barrel, structural genomics; HET: NAG; 2.90A {Phleum pratense} SCOP: b.7.3.1 b.52.1.3
Probab=21.95 E-value=2.6e+02 Score=23.57 Aligned_cols=104 Identities=12% Similarity=0.163 Sum_probs=54.6
Q ss_pred hcCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCCCcCCC-eEecCCCCCCCCCCCCccEEEEEEEeCCc--cee---ec
Q 022539 129 YKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGT-KITFPEKGNQEPGLPPADLIFVVEEKPHA--VFQ---RD 202 (295)
Q Consensus 129 ~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~-~i~~~g~G~~~~~~~~GDliv~i~v~~h~--~f~---r~ 202 (295)
+......|.+.|-.|.-.| ...|.+.|..|..+.- .|.+...|. .|| |..|+++... .|. |.
T Consensus 126 ~~~Gii~V~yrrV~C~~~g-----g~~i~f~v~~Gs~~~~~~vlv~n~~g------~g~-V~~V~ik~~~~~~W~~m~r~ 193 (241)
T 1n10_A 126 RSAGELELQFRRVKCKYPE-----GTKVTFHVEKGSNPNYLALLVKYVNG------DGD-VVAVDIKEKGKDKWIELKES 193 (241)
T ss_dssp HTTCSEEEEEEECCCCCCT-----TCCCEEEECTTCBTTEEEEEEECCCC------SSC-EEEEEEEETTCCCCEECBCC
T ss_pred ccCCEEEEEEEEEeCCCCC-----CCceEEEEcCCCCcceEEEEEEecCC------CCC-EEEEEEEeCCCCCeEECccC
Confidence 3445666777554442221 0146677776654443 233444322 234 5666676652 343 43
Q ss_pred -CCceEEEEEecHHHHhcC-CEEEEeccCCcEEEEe--eCCCCCCCcEEE
Q 022539 203 -GNDLVVNHKISLLEALTG-LSLNLTALDGRNLTLP--VTDIIQPGSEVV 248 (295)
Q Consensus 203 -g~DL~~~~~I~l~~Al~G-~~~~i~~l~g~~i~v~--i~~~~~~g~~~r 248 (295)
|+.-.+.. . ..|.| .++.|.+.+|+++... +|+.-++|+...
T Consensus 194 wG~~W~~~~--~--~~l~gpls~RvT~~~G~~v~~~nViP~~w~~g~ty~ 239 (241)
T 1n10_A 194 WGAIWRIDT--P--DKLTGPFTVRYTTEGGTKTEAEDVIPEGWKADTSYE 239 (241)
T ss_dssp TTTCEEEEC--S--SCCCSCEEEEEEESSSCEEEEEEEECSSCCSSEEEE
T ss_pred cCcEEEeCC--C--CCCCCCEEEEEEEeCCcEEEEccccCCCCCCCCEEe
Confidence 43322221 1 11334 4788889999987654 688888887653
No 63
>1hme_A High mobility group protein fragment-B; DNA-binding; NMR {Rattus norvegicus} SCOP: a.21.1.1 PDB: 1hmf_A 1nhm_A 1nhn_A 1hsm_A 1hsn_A 1j3c_A 1j3d_A 2yqi_A
Probab=20.97 E-value=1e+02 Score=20.52 Aligned_cols=39 Identities=15% Similarity=0.153 Sum_probs=28.4
Q ss_pred HHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCcccccc
Q 022539 21 KKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQI 65 (295)
Q Consensus 21 k~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~ 65 (295)
.+.+|...+.-||+.+ ..+..+.|.+.|..|++.++...
T Consensus 18 ~~~~r~~~~~~~p~~~------~~eisk~lg~~Wk~ls~~eK~~y 56 (77)
T 1hme_A 18 CSEYRPKIKGEHPGLS------IGDVAKKLGEMWNNTAADDKQPY 56 (77)
T ss_dssp HHHHHHHHHHHCTTCC------HHHHHHHHHHHHHHSCGGGSHHH
T ss_pred HHHHHHHHHHHCCCCC------HHHHHHHHHHHHHhCCHHHHHHH
Confidence 3455666667788865 35788899999999998766543
No 64
>2crj_A SWI/SNF-related matrix-associated actin- dependent regulator of chromatin subfamily...; structural DNA-binding protein BRAF35, DNA-bending; NMR {Mus musculus}
Probab=20.93 E-value=1.1e+02 Score=21.43 Aligned_cols=41 Identities=17% Similarity=0.240 Sum_probs=30.0
Q ss_pred HHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCcccccccc
Q 022539 21 KKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYD 67 (295)
Q Consensus 21 k~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd 67 (295)
.+.+|...+.-||+.+ ..+..+.|.+.|..|++.++....+
T Consensus 19 ~~~~r~~~~~~~p~~~------~~eisk~lg~~Wk~ls~eeK~~Y~~ 59 (92)
T 2crj_A 19 LNERREQIRTRHPDLP------FPEITKMLGAEWSKLQPAEKQRYLD 59 (92)
T ss_dssp HHHHHHHHHHHCTTCC------HHHHHHHHHHHHHTCCTTHHHHHHH
T ss_pred HHHHHHHHHHHCCCCC------HHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 3456666777888865 3578888999999999887655444
No 65
>2wkk_A Galectin-2; sugar-binding protein, secreted, cell WALL, sugar binding, sugar binding protein, beta-galactoside binding lectin, fruiting BODY; HET: GAL NAG FUC; 1.50A {Coprinopsis cinerea} PDB: 1ulc_A* 1ul9_A* 1ule_A* 1ulf_A* 1ulg_A* 1uld_A*
Probab=20.73 E-value=1.6e+02 Score=22.81 Aligned_cols=43 Identities=14% Similarity=0.181 Sum_probs=29.0
Q ss_pred EEeeCCCCCCCcEEEEcCCCcCC-CCC-----CCCCCCEEEEEEEECCC
Q 022539 234 TLPVTDIIQPGSEVVIPNEGMPI-SKD-----PSKKGNLIIKFDIMFPS 276 (295)
Q Consensus 234 ~v~i~~~~~~g~~~rl~g~G~p~-~~~-----~~~~GDL~v~~~v~~P~ 276 (295)
.+.||.+.++|+.++|.|.=.+. ... ....+|+.++|++.|.+
T Consensus 10 ~~~ip~gl~~G~~i~I~G~~~~~~a~rF~INl~~g~~dialHfnpRf~~ 58 (150)
T 2wkk_A 10 QVKLQNDFKPESVAAIRSSAFNSKGGTTVFNFLSAGENILLHISIRPGE 58 (150)
T ss_dssp EEEEEEEECTTCEEEEECSCCCTTCCCEEEEEECTTCCEEEEEEEETTT
T ss_pred ceecCCCCcCCCEEEEEEEECCCCCCEEEEEEecCCCCEEEEEeeecCC
Confidence 56677889999999998842221 110 01234999999999874
Done!