BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022540
(295 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q93WI0|STR12_ARATH Rhodanese-like/PpiC domain-containing protein 12 OS=Arabidopsis
thaliana GN=At5g19370 PE=2 SV=1
Length = 299
Score = 303 bits (776), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 138/208 (66%), Positives = 172/208 (82%), Gaps = 2/208 (0%)
Query: 88 REILVQHLLVKEDDLNLLSELQRRVSQGEDLSDLAVEHSICPSKGEGGMLGWVRKGQLVP 147
REILVQHLLVK +D+ L +ELQ++ GE++SDLA E+SICPSK +GG+LGWV+ GQ+VP
Sbjct: 94 REILVQHLLVKNNDVELFAELQKKFLDGEEMSDLAAEYSICPSKKDGGILGWVKLGQMVP 153
Query: 148 EFEEVAFTTPLNKVARCKTKFGWHLLQVLSEREASLLQDIQPDELHKKMQDPNFHKEAQL 207
EFEE AF LN+V RC+T+FG HLLQVLSERE ++DIQ +ELH KMQDP F EAQL
Sbjct: 154 EFEEAAFKAELNQVVRCRTQFGLHLLQVLSEREP--VKDIQVEELHSKMQDPVFMDEAQL 211
Query: 208 IDVREPEEVALSSLPGFQVLPLRQFGSWGPDITVKFDPQKDTYVMCHHGMRSLQVAQWLQ 267
IDVREP E+ ++SLPGF+V PLRQFG+W PDIT K +P+KDT+V+C G RS+QVA WLQ
Sbjct: 212 IDVREPNEIEIASLPGFKVFPLRQFGTWAPDITSKLNPEKDTFVLCKVGGRSMQVANWLQ 271
Query: 268 TQGFRRVFNVSGGIHAYATKVDPSIPTY 295
+QGF+ V+N++GGI AY+ KVDPSIPTY
Sbjct: 272 SQGFKSVYNITGGIQAYSLKVDPSIPTY 299
>sp|P0A265|PPIC_SALTY Peptidyl-prolyl cis-trans isomerase C OS=Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720) GN=ppiC PE=3 SV=2
Length = 93
Score = 75.5 bits (184), Expect = 4e-13, Method: Composition-based stats.
Identities = 38/87 (43%), Positives = 56/87 (64%), Gaps = 3/87 (3%)
Query: 94 HLLVKEDDLNLLSELQRRVSQGEDLSDLAVEHSICPSKGEGGMLGWVRKGQLVPEFEEVA 153
H+LVKE+ L L +L ++ G D LA +HSICPS +GG LG R+GQ+VP F++V
Sbjct: 9 HILVKEEKLAL--DLLEQIKNGGDFEKLAKKHSICPSGKKGGHLGEFRQGQMVPAFDKVV 66
Query: 154 FTTP-LNKVARCKTKFGWHLLQVLSER 179
F+ P L T+FG+H+++VL +
Sbjct: 67 FSCPVLEPTGPLHTQFGYHIIKVLYRK 93
>sp|P0A266|PPIC_SALTI Peptidyl-prolyl cis-trans isomerase C OS=Salmonella typhi GN=ppiC
PE=3 SV=2
Length = 93
Score = 75.5 bits (184), Expect = 4e-13, Method: Composition-based stats.
Identities = 38/87 (43%), Positives = 56/87 (64%), Gaps = 3/87 (3%)
Query: 94 HLLVKEDDLNLLSELQRRVSQGEDLSDLAVEHSICPSKGEGGMLGWVRKGQLVPEFEEVA 153
H+LVKE+ L L +L ++ G D LA +HSICPS +GG LG R+GQ+VP F++V
Sbjct: 9 HILVKEEKLAL--DLLEQIKNGGDFEKLAKKHSICPSGKKGGHLGEFRQGQMVPAFDKVV 66
Query: 154 FTTP-LNKVARCKTKFGWHLLQVLSER 179
F+ P L T+FG+H+++VL +
Sbjct: 67 FSCPVLEPTGPLHTQFGYHIIKVLYRK 93
>sp|P0A9L5|PPIC_ECOLI Peptidyl-prolyl cis-trans isomerase C OS=Escherichia coli (strain
K12) GN=ppiC PE=1 SV=2
Length = 93
Score = 75.5 bits (184), Expect = 5e-13, Method: Composition-based stats.
Identities = 38/84 (45%), Positives = 54/84 (64%), Gaps = 3/84 (3%)
Query: 94 HLLVKEDDLNLLSELQRRVSQGEDLSDLAVEHSICPSKGEGGMLGWVRKGQLVPEFEEVA 153
H+LVKE+ L L +L ++ G D LA +HSICPS GG LG R+GQ+VP F++V
Sbjct: 9 HILVKEEKLAL--DLLEQIKNGADFGKLAKKHSICPSGKRGGDLGEFRQGQMVPAFDKVV 66
Query: 154 FTTP-LNKVARCKTKFGWHLLQVL 176
F+ P L T+FG+H+++VL
Sbjct: 67 FSCPVLEPTGPLHTQFGYHIIKVL 90
>sp|P0A9L6|PPIC_ECOL6 Peptidyl-prolyl cis-trans isomerase C OS=Escherichia coli O6:H1
(strain CFT073 / ATCC 700928 / UPEC) GN=ppiC PE=3 SV=2
Length = 93
Score = 75.5 bits (184), Expect = 5e-13, Method: Composition-based stats.
Identities = 38/84 (45%), Positives = 54/84 (64%), Gaps = 3/84 (3%)
Query: 94 HLLVKEDDLNLLSELQRRVSQGEDLSDLAVEHSICPSKGEGGMLGWVRKGQLVPEFEEVA 153
H+LVKE+ L L +L ++ G D LA +HSICPS GG LG R+GQ+VP F++V
Sbjct: 9 HILVKEEKLAL--DLLEQIKNGADFGKLAKKHSICPSGKRGGDLGEFRQGQMVPAFDKVV 66
Query: 154 FTTP-LNKVARCKTKFGWHLLQVL 176
F+ P L T+FG+H+++VL
Sbjct: 67 FSCPVLEPTGPLHTQFGYHIIKVL 90
>sp|P0A9L7|PPIC_ECO57 Peptidyl-prolyl cis-trans isomerase C OS=Escherichia coli O157:H7
GN=ppiC PE=3 SV=2
Length = 93
Score = 75.5 bits (184), Expect = 5e-13, Method: Composition-based stats.
Identities = 38/84 (45%), Positives = 54/84 (64%), Gaps = 3/84 (3%)
Query: 94 HLLVKEDDLNLLSELQRRVSQGEDLSDLAVEHSICPSKGEGGMLGWVRKGQLVPEFEEVA 153
H+LVKE+ L L +L ++ G D LA +HSICPS GG LG R+GQ+VP F++V
Sbjct: 9 HILVKEEKLAL--DLLEQIKNGADFGKLAKKHSICPSGKRGGDLGEFRQGQMVPAFDKVV 66
Query: 154 FTTP-LNKVARCKTKFGWHLLQVL 176
F+ P L T+FG+H+++VL
Sbjct: 67 FSCPVLEPTGPLHTQFGYHIIKVL 90
>sp|Q60B78|SURA_METCA Chaperone SurA OS=Methylococcus capsulatus (strain ATCC 33009 /
NCIMB 11132 / Bath) GN=surA PE=3 SV=1
Length = 454
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 71/122 (58%), Gaps = 17/122 (13%)
Query: 92 VQHLLVK-------EDDLNLLSELQRRVSQGEDLSDLAVEHSICPSKG---EGGMLGWVR 141
V+H+L++ ED N L L+ R+ G+D ++LA HS KG +GG LGWV+
Sbjct: 292 VRHILIRPNEVLSDEDAKNKLLALKTRIENGDDFAELARGHS--DDKGSAIKGGDLGWVK 349
Query: 142 KGQLVPEFEEVAFTTPLNKVAR-CKTKFGWHLLQVLSEREAS----LLQDIQPDELHKKM 196
G LVP FEE N+++ +T+FGWHL+QVL +E+S +L++ DEL K+
Sbjct: 350 PGALVPPFEEAMNALDENQLSDPVQTQFGWHLIQVLERQESSDTNEVLKNRARDELFKRK 409
Query: 197 QD 198
D
Sbjct: 410 VD 411
Score = 36.6 bits (83), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 52/113 (46%), Gaps = 11/113 (9%)
Query: 78 TEGSSPGGGDREILVQHLLVKE------DDLNLLSELQRRVSQ----GEDLSDLAVEHSI 127
+G S DRE + H+L+ D++ E RV + G D D ++ +S
Sbjct: 168 AQGGSGAVADREYRLGHILIATPREASPDEVKKARERADRVVKELKAGLDFKDASIRYSD 227
Query: 128 CPSKGEGGMLGWVRKGQLVPEFEEVAFTTPLNKVAR-CKTKFGWHLLQVLSER 179
P EGG LGW + ++ EV +V+ ++ G+H++++L+ R
Sbjct: 228 DPQALEGGDLGWRKLSEIPSHIAEVVGGMKDGEVSDPIRSPGGYHIVKMLAMR 280
>sp|Q2S9C1|SURA_HAHCH Chaperone SurA OS=Hahella chejuensis (strain KCTC 2396) GN=surA
PE=3 SV=1
Length = 434
Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 79/161 (49%), Gaps = 25/161 (15%)
Query: 36 QKPASFASFYKSLNPASNS----NSFHIHIISRSFTSPKAASFSSGTEGSSPGGGDREIL 91
Q P+ FA L P S NS +H ++ K S E S
Sbjct: 247 QVPSLFADVAPKLAPGQTSEPIRNSSGVHFVA---MLEKRGGVSKVVEQSK--------- 294
Query: 92 VQHLLVKEDDL-------NLLSELQRRVSQGEDLSDLAVEHSI-CPSKGEGGMLGWVRKG 143
V+H+LV++++L L+ E+ +V GED ++LA +S S GG L WV G
Sbjct: 295 VRHILVQQNELRDEIAAKKLIEEIYGKVQAGEDFAELAKAYSDDAVSAAAGGSLDWVNPG 354
Query: 144 QLVPEFEEVAFTTPLNKVAR-CKTKFGWHLLQVLSEREASL 183
+VPEF+++ TP+ V++ ++ FGWH+LQV REA +
Sbjct: 355 DMVPEFDQMMRETPVGAVSKPFQSTFGWHILQVQDRREADI 395
Score = 32.7 bits (73), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 105 LSELQRRVSQGEDLSDLAVEHSICPSKGEGGMLGWVRKGQLVPEFEEVA-FTTPLNKVAR 163
+ +++ ++ QG D LA+ +S + +GG LGW + Q+ F +VA P
Sbjct: 208 VEKIRSQLDQGVDFKQLAITYSDASTATQGGDLGWRKPDQVPSLFADVAPKLAPGQTSEP 267
Query: 164 CKTKFGWHLLQVLSER 179
+ G H + +L +R
Sbjct: 268 IRNSSGVHFVAMLEKR 283
>sp|Q5ZYR3|SURA_LEGPH Chaperone SurA OS=Legionella pneumophila subsp. pneumophila (strain
Philadelphia 1 / ATCC 33152 / DSM 7513) GN=surA PE=3
SV=2
Length = 429
Score = 72.0 bits (175), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 75/124 (60%), Gaps = 9/124 (7%)
Query: 92 VQHLLVKEDD-------LNLLSELQRRVSQGEDLSDLAVEHSI-CPSKGEGGMLGWVRKG 143
V+H+L+K D + ++ + R++ G+D + +A ++S+ S +GG LGWV G
Sbjct: 286 VRHILLKPDASMVPSEAIKQVNNIYRQIQSGKDFALMAKQYSLDAASAVKGGDLGWVNPG 345
Query: 144 QLVPEFEEVAFTTPLNKVAR-CKTKFGWHLLQVLSEREASLLQDIQPDELHKKMQDPNFH 202
+LVPEFE+ + PL+KV++ KT++GWHL++V++ R+ + + ++ + +Q F
Sbjct: 346 ELVPEFEKTMNSLPLHKVSKPVKTQYGWHLIEVIARRQKDDSEAFKKQQVRQFLQQRKFV 405
Query: 203 KEAQ 206
+ Q
Sbjct: 406 EAVQ 409
>sp|Q5WZN0|SURA_LEGPL Chaperone SurA OS=Legionella pneumophila (strain Lens) GN=surA PE=3
SV=1
Length = 429
Score = 72.0 bits (175), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 75/124 (60%), Gaps = 9/124 (7%)
Query: 92 VQHLLVKEDD-------LNLLSELQRRVSQGEDLSDLAVEHSI-CPSKGEGGMLGWVRKG 143
V+H+L+K D + ++ + R++ G+D + +A ++S+ S +GG LGWV G
Sbjct: 286 VRHILLKPDASMVPSEAIKQVNNIYRQIQSGKDFALMAKQYSLDAASAVKGGDLGWVNPG 345
Query: 144 QLVPEFEEVAFTTPLNKVAR-CKTKFGWHLLQVLSEREASLLQDIQPDELHKKMQDPNFH 202
+LVPEFE+ + PL+KV++ KT++GWHL++V++ R+ + + ++ + +Q F
Sbjct: 346 ELVPEFEKTMNSLPLHKVSKPVKTQYGWHLIEVIARRQKDDSEAFKKQQVRQFLQQRKFV 405
Query: 203 KEAQ 206
+ Q
Sbjct: 406 EAVQ 409
>sp|Q5X877|SURA_LEGPA Chaperone SurA OS=Legionella pneumophila (strain Paris) GN=surA
PE=3 SV=1
Length = 429
Score = 71.6 bits (174), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 75/124 (60%), Gaps = 9/124 (7%)
Query: 92 VQHLLVKEDD-------LNLLSELQRRVSQGEDLSDLAVEHSI-CPSKGEGGMLGWVRKG 143
V+H+L+K D + ++ + R++ G+D + +A ++S+ S +GG LGWV G
Sbjct: 286 VRHILLKPDASMVPSEAIKQVNNIYRQIQSGKDFALMAKQYSLDAASAVKGGDLGWVNPG 345
Query: 144 QLVPEFEEVAFTTPLNKVAR-CKTKFGWHLLQVLSEREASLLQDIQPDELHKKMQDPNFH 202
+LVPEFE+ + PL+KV++ KT++GWHL++V++ R+ + + ++ + +Q F
Sbjct: 346 ELVPEFEKTMNSLPLHKVSKPVKTQYGWHLIEVIARRQKDDSEAFKKQQVRQFLQQRKFV 405
Query: 203 KEAQ 206
+ Q
Sbjct: 406 EAVQ 409
>sp|Q3JAF1|SURA_NITOC Chaperone SurA OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB
11848) GN=surA PE=3 SV=1
Length = 426
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 76/134 (56%), Gaps = 13/134 (9%)
Query: 84 GGGDREILVQ----HLLVKEDDLN-------LLSELQRRVSQGEDLSDLAVEHSICPSKG 132
G G ++++ Q H+L++ D+L LS+L++R+ G+D S+LA HS +
Sbjct: 273 GEGQQQLVTQTQARHILLRADELASEREVQLRLSQLRQRILSGDDFSELAQAHSDDKASA 332
Query: 133 -EGGMLGWVRKGQLVPEFEEVAFTTPLNKVAR-CKTKFGWHLLQVLSEREASLLQDIQPD 190
+GG LGWV GQ++P FEE + +++ KT+FGWH++QVL R+ ++ ++ +
Sbjct: 333 LKGGDLGWVSPGQMIPRFEEAMRSLEPGEISEPFKTQFGWHVVQVLDRRQENMTEEFNRN 392
Query: 191 ELHKKMQDPNFHKE 204
+++ +E
Sbjct: 393 RAKMEIRQRKVEEE 406
Score = 33.9 bits (76), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 110 RRVSQGEDLSDLAVEHSICPSKGEGGMLGWVRKGQLVPEFEEVAFTTPLNKVAR-CKTKF 168
+++ +G D +AV +S EGG LGW + GQL F +V +++ ++
Sbjct: 202 QQLREGADFQKVAVTYSDGQQALEGGDLGWRKMGQLPTLFVDVVPQLQAGDISKLIRSPS 261
Query: 169 GWHLLQVLSER 179
G+H++++L R
Sbjct: 262 GFHIVKLLDYR 272
>sp|Q1RI35|PLP_RICBR Parvulin-like PPIase OS=Rickettsia bellii (strain RML369-C) GN=plp
PE=3 SV=1
Length = 284
Score = 68.6 bits (166), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 64/100 (64%), Gaps = 9/100 (9%)
Query: 86 GDREILVQHLLVK-EDDLNLLSELQRRVSQGEDLSDLAVEHSI-CPSKGEGGMLGWV--- 140
G +I V H+LVK E + N +L+ ++++G D + LA E S+ S GG++G++
Sbjct: 138 GKEQIKVAHILVKSEKEAN---DLKNKLNKGADFAKLAGESSLDKASATNGGVIGYILLN 194
Query: 141 RKGQLVPEFEEVAFTTPLNKVAR-CKTKFGWHLLQVLSER 179
+ GQLVPEFE AF +N+V+ KT +GWH+++VL ++
Sbjct: 195 QPGQLVPEFENKAFALKVNEVSTPVKTDYGWHIIKVLEKK 234
>sp|Q0VMV4|SURA_ALCBS Chaperone SurA OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651
/ DSM 11573) GN=surA PE=3 SV=1
Length = 435
Score = 68.2 bits (165), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 72/134 (53%), Gaps = 13/134 (9%)
Query: 84 GGGDREIL---VQHLLVKEDDLNLLSELQRRVSQGED--------LSDLAVEHSICP-SK 131
GG ++ + V+H+L+K D L + Q+R + D + A E S P S
Sbjct: 284 GGAEKVVTQYHVRHVLIKADALTSAEQAQQRAIRLHDEVAAGKRQFKETAAEFSDDPGSA 343
Query: 132 GEGGMLGWVRKGQLVPEFEEVAFTTPLNKVARC-KTKFGWHLLQVLSEREASLLQDIQPD 190
GG LGWV KG++VPEFE+V TP+ +++ +++FGWH L+V R+A + + +
Sbjct: 344 RNGGELGWVNKGEMVPEFEQVMLNTPVGELSPVFESQFGWHFLRVDDIRDADMSTEFRRM 403
Query: 191 ELHKKMQDPNFHKE 204
+ + +Q F +E
Sbjct: 404 QATQALQKRRFEEE 417
Score = 33.1 bits (74), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 107 ELQRRVSQGEDLSDLAVEHSICPSKGEGGMLGWVRKGQLVPEFEEVAFTTPLNKVAR-CK 165
E+ R+ G D LA+ S P+ EGG LGW Q F E A + ++ +
Sbjct: 210 EIIERLEAGSDFQQLAIALSDGPNALEGGDLGWRPAAQWPTLFAENAINLKKGEFSQPLR 269
Query: 166 TKFGWHLLQVLSER 179
+ G+H+L+++ +
Sbjct: 270 SGAGFHILKMIDRK 283
>sp|Q4K4X7|SURA_PSEF5 Chaperone SurA OS=Pseudomonas fluorescens (strain Pf-5 / ATCC
BAA-477) GN=surA PE=1 SV=2
Length = 426
Score = 68.2 bits (165), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 79/154 (51%), Gaps = 15/154 (9%)
Query: 84 GGGDR---EILVQHLLVK-------EDDLNLLSELQRRVSQGEDLSDLAVEHSICPSKG- 132
GGG++ E+ V+H+L+K E+ L +L R+ GED ++LA +S P
Sbjct: 268 GGGNQVRDEVHVRHILIKPSEIRSEEETKRLAQKLYDRIEAGEDFAELAKSYSEDPGSAL 327
Query: 133 EGGMLGWVRKGQLVPEFEEVAFTTPLNKVAR-CKTKFGWHLLQVLSEREASLLQDIQPDE 191
GG L W+ LVPEF EV TP ++++ K+ +GWH+L+VL R + +
Sbjct: 328 NGGDLNWIDPNALVPEFREVMAKTPQGQLSKPFKSPYGWHVLEVLGRRATDSTSQAREQQ 387
Query: 192 LHKKMQDPNFHKEAQ--LIDVREPEEVALSSLPG 223
+++ + +E Q L +R+ V + LPG
Sbjct: 388 AMTVLRNRKYDEELQTWLRQIRDEAYVEI-KLPG 420
Score = 38.5 bits (88), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 107 ELQRRVSQGEDLSDLAVEHSICPSKGEGGMLGWVRKGQLVPEFEEVAFTTPLNKVAR-CK 165
E+ +++ QG D + LA+ S + EGG +GW + QL P F+ + + + +
Sbjct: 194 EVYQQLKQGADFAQLAIARSGSDNALEGGDMGWRKAAQLPPPFDRELSAMAVGDITQPAR 253
Query: 166 TKFGWHLLQVLSER 179
T G+ +L++L +R
Sbjct: 254 TPGGFIILKLLDKR 267
>sp|Q8Y220|SURA_RALSO Chaperone SurA OS=Ralstonia solanacearum (strain GMI1000) GN=surA
PE=3 SV=2
Length = 496
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 79/171 (46%), Gaps = 24/171 (14%)
Query: 34 IFQKPASFASFYKSLNPASNSNSFHIHIISRSFTSPKAASF------SSGTEGSSPGGGD 87
I + PA FA+ L P ++ + SP A F +G++
Sbjct: 300 IGRLPAQFANAVVDLKPG--------QVVDQVIESP--AGFHVLKLVDKRAQGTAITAKV 349
Query: 88 REILVQHLLVK-------EDDLNLLSELQRRVSQGEDLSDLAVEHSICPSKGEGGMLGWV 140
+ V+H+L+K +D L+ L+ R+ G D D A +S S GG LGWV
Sbjct: 350 AQTQVRHILIKTGPTMSADDARRQLAGLRDRIVHGYDFGDAARRYSQDTSASAGGELGWV 409
Query: 141 RKGQLVPEFEEVAFTTPLNKVAR-CKTKFGWHLLQVLSEREASLLQDIQPD 190
GQLVPEFE+ +V++ +++FG HL+QV REA + D Q D
Sbjct: 410 SPGQLVPEFEQAMGLLKPGEVSQPVQSQFGLHLIQVEGRREAEVPVDRQRD 460
>sp|Q1GZC0|SURA_METFK Chaperone SurA OS=Methylobacillus flagellatus (strain KT / ATCC
51484 / DSM 6875) GN=surA PE=3 SV=1
Length = 437
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 63/115 (54%), Gaps = 9/115 (7%)
Query: 80 GSSPGGGDREILVQHLLVKEDDL-------NLLSELQRRVSQGEDLSDLAVEHSICPSKG 132
GSSP D + V+H+L+K ++ ++ ++ R+ G D ++LA ++S S
Sbjct: 284 GSSPLVVD-QTHVRHILIKLSEVVSELEAEQKINSIKERLDHGADFAELARQYSEDASAN 342
Query: 133 EGGMLGWVRKGQLVPEFEEVAFTTPLNKV-ARCKTKFGWHLLQVLSEREASLLQD 186
GG LGW G VP FE+ +N++ A +T FGWH++QVL R+ + Q+
Sbjct: 343 NGGDLGWTNAGDTVPAFEKAMNALDINEISAPVRTPFGWHIIQVLERRKQDMTQE 397
Score = 34.7 bits (78), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 52/116 (44%), Gaps = 11/116 (9%)
Query: 78 TEGSSPGGGDREILVQHLLVKEDDLNLLSELQR----------RVSQGEDLSDLAVEHSI 127
T SS E V H+L++ + + ELQ+ + G D + ++ +S
Sbjct: 170 TTQSSRNDIQDEFEVAHILIRAPEESTPEELQKLKAKAEAALKELQSGADFAQVSAGYSD 229
Query: 128 CPSKGEGGMLGWVRKGQLVPEF-EEVAFTTPLNKVARCKTKFGWHLLQVLSEREAS 182
P+ EGG+LGW QL F + + P ++ G+H+L++L+ R S
Sbjct: 230 APNALEGGILGWKASSQLPSLFVDALQALQPGQLSPVLRSPNGYHILKLLNRRGGS 285
>sp|Q4UKY0|PLP_RICFE Parvulin-like PPIase OS=Rickettsia felis (strain ATCC VR-1525 /
URRWXCal2) GN=plp PE=3 SV=1
Length = 282
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 64/100 (64%), Gaps = 9/100 (9%)
Query: 86 GDREILVQHLLVK-EDDLNLLSELQRRVSQGEDLSDLAVEHSI-CPSKGEGGMLGWV--- 140
G +I V H+LVK + + N ++ ++S+G + + LA E S+ S GG++G++
Sbjct: 137 GKEQIKVAHILVKSQKEAN---NIKTKLSKGGNFTKLAEESSLDKASASNGGVIGYILLN 193
Query: 141 RKGQLVPEFEEVAFTTPLNKVAR-CKTKFGWHLLQVLSER 179
+ GQLVPEFE+ AF +N+V+ KT FGWH+++VL ++
Sbjct: 194 QPGQLVPEFEKKAFALKVNEVSTPVKTDFGWHIIKVLEKK 233
>sp|Q1LRA3|SURA_RALME Chaperone SurA OS=Ralstonia metallidurans (strain CH34 / ATCC 43123
/ DSM 2839) GN=surA PE=3 SV=1
Length = 493
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 80/170 (47%), Gaps = 28/170 (16%)
Query: 38 PASFASFYKSLNPAS-------NSNSFHIHIISRSFTSPKAASFSSGTEGSSPGGGDR-- 88
PA FA+ L P + ++N FH+ + S T + P DR
Sbjct: 299 PAVFANAVVDLQPGAVVPEVLESANGFHVVKL-----------VSKRTAAAQPAASDRIA 347
Query: 89 EILVQHLLVK-------EDDLNLLSELQRRVSQGEDLSDLAVEHSICPSKGEGGMLGWVR 141
+ V+H+L++ + ++ ++ R++ G D +D A +S S +GG LGWV
Sbjct: 348 QTQVRHILIRTGPNMPEAEAKRQMATIRDRITHGVDFADAARRYSQDGSASQGGELGWVS 407
Query: 142 KGQLVPEFEEVAFTTPLNKVAR-CKTKFGWHLLQVLSEREASLLQDIQPD 190
G+LVPEFE+ +++ T+FG HL+QV + RE + + Q D
Sbjct: 408 PGELVPEFEQAMNRLRPGEISDPVVTQFGVHLIQVENRRETEVSPEKQRD 457
Score = 31.6 bits (70), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 12/115 (10%)
Query: 80 GSSPGGGDREILVQHLLVK--ED-------DLNLLSE-LQRRVSQGEDLSDLAVEHSICP 129
G + G E V +LV+ ED L +E L ++V G D ++LA +S P
Sbjct: 223 GQAAASGPTEFNVAQILVRVPEDASDAQKAQLKTKAEGLLKQVQGGADFAELAKANSEAP 282
Query: 130 SKGEGGMLGWVRKGQLVPEFEEVAFTTPLNKVA--RCKTKFGWHLLQVLSEREAS 182
+GG LG+ G+L F V ++ G+H+++++S+R A+
Sbjct: 283 EASQGGSLGFREIGRLPAVFANAVVDLQPGAVVPEVLESANGFHVVKLVSKRTAA 337
>sp|Q92H91|PLP_RICCN Parvulin-like PPIase OS=Rickettsia conorii (strain ATCC VR-613 /
Malish 7) GN=plp PE=3 SV=1
Length = 282
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 63/99 (63%), Gaps = 7/99 (7%)
Query: 86 GDREILVQHLLVKEDDLNLLSELQRRVSQGEDLSDLAVEHSI-CPSKGEGGMLGWV---R 141
G +I V H+LVK ++++ ++S+G + + LA E S+ S GG++G++ +
Sbjct: 137 GKEQIKVAHILVKSQ--KEANDIKTKLSKGGNFTKLAEELSLDKASASNGGVIGYILLNQ 194
Query: 142 KGQLVPEFEEVAFTTPLNKVAR-CKTKFGWHLLQVLSER 179
GQLVPEFE+ AF +N+V+ KT FGWH+++VL ++
Sbjct: 195 PGQLVPEFEKKAFALKVNEVSTPVKTDFGWHIIKVLEKK 233
>sp|Q7NQB0|SURA_CHRVO Chaperone SurA OS=Chromobacterium violaceum (strain ATCC 12472 /
DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC
9757) GN=surA PE=3 SV=1
Length = 429
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 56/93 (60%), Gaps = 7/93 (7%)
Query: 105 LSELQRRVSQGEDLSDLAVEHSICPSKGEGGMLGWVRKGQLVPEFEEVAFTTPLNKVAR- 163
+ +++ R+ +G +D+A +S S +GG LGWV G LVPEFE+ + P+ +V++
Sbjct: 308 IDQVRDRIMRGAKFADMAKLYSEDGSNAKGGDLGWVNMGDLVPEFEKAMVSLPIGQVSQP 367
Query: 164 CKTKFGWHLLQVLSEREASLLQDIQPDELHKKM 196
+T FGWHL+ V +R QD+ D H+KM
Sbjct: 368 VRTPFGWHLILVEGKRN----QDVSSD--HEKM 394
>sp|Q48NT5|SURA_PSE14 Chaperone SurA OS=Pseudomonas syringae pv. phaseolicola (strain
1448A / Race 6) GN=surA PE=3 SV=2
Length = 428
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 73/146 (50%), Gaps = 12/146 (8%)
Query: 89 EILVQHLLVKEDDLNLLSELQR-------RVSQGEDLSDLAVEHSICPSKG-EGGMLGWV 140
E+ V+H+L+K ++ E +R R+ GED ++LA S P GG L WV
Sbjct: 278 EVHVRHILIKPSEIRNEEETKRLAEKIYDRIQNGEDFAELAKSFSEDPGSALNGGDLNWV 337
Query: 141 RKGQLVPEFEEVAFTTPLNKVAR-CKTKFGWHLLQVLSEREASLLQDIQPDELHKKMQDP 199
LVPEF +V TP ++++ KT +GWH+L+VL R + + +++
Sbjct: 338 DPNSLVPEFRQVMNETPQGELSKPFKTAYGWHVLEVLGRRSTDATDQAREQQALNVLRNR 397
Query: 200 NFHKEAQ--LIDVREPEEVALSSLPG 223
+ +E Q L +R+ V + LPG
Sbjct: 398 KYDEELQTWLRQIRDEAYVEI-KLPG 422
Score = 36.6 bits (83), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 111 RVSQGEDLSDLAVEHSICPSKGEGGMLGWVRKGQLVPEFEEVAFTTPLNKVA-RCKTKFG 169
++ +G D + LA S + EGG +GW + QL P F ++ P+ V +T G
Sbjct: 198 QLKKGADFTRLAATTSSSENALEGGDMGWRKAAQLPPPFGDMLSAMPVGDVTPPARTPGG 257
Query: 170 WHLLQVLSER 179
+ +L++L +R
Sbjct: 258 FIILKLLEKR 267
>sp|Q9ZCX6|PLP_RICPR Parvulin-like PPIase OS=Rickettsia prowazekii (strain Madrid E)
GN=plp PE=3 SV=1
Length = 282
Score = 65.5 bits (158), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 64/100 (64%), Gaps = 9/100 (9%)
Query: 86 GDREILVQHLLVK-EDDLNLLSELQRRVSQGEDLSDLAVEHSICPSKG-EGGMLGWV--- 140
G +I V H+LVK + + N + + ++S+G + + LA E S+ + GG++G++
Sbjct: 137 GKEQIKVAHILVKSQKEANTV---KTKLSKGGNFTKLAEEFSLDKATASNGGIIGYIILN 193
Query: 141 RKGQLVPEFEEVAFTTPLNKVAR-CKTKFGWHLLQVLSER 179
+ GQLVPEFE+ AF +N+V+ KT FGWH+++VL ++
Sbjct: 194 QPGQLVPEFEQKAFALKVNEVSTPVKTSFGWHIIKVLEKK 233
>sp|Q82W17|SURA_NITEU Chaperone SurA OS=Nitrosomonas europaea (strain ATCC 19718 / NBRC
14298) GN=surA PE=3 SV=1
Length = 448
Score = 65.1 bits (157), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 93 QHLLVK-------EDDLNLLSELQRRVSQGEDLSDLAVEHSICPSKGEGGMLGWVRKGQL 145
QH+L+K ED L+++L R+ G D D+A HS S GG LGWV G
Sbjct: 308 QHILIKVSELVSEEDAHQLINQLMERIHNGADFMDVAKAHSEDASASAGGDLGWVSPGDT 367
Query: 146 VPEFEEVAFTTPLNKVA-RCKTKFGWHLLQVLSER 179
VPEFE+ +V+ +T FGWHL++V+ R
Sbjct: 368 VPEFEQAMNALLPGQVSPPVRTPFGWHLIKVIERR 402
Score = 39.7 bits (91), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 12/114 (10%)
Query: 78 TEGSSPGGGDREILVQHLLVKEDDLNLLSELQRR----------VSQGEDLSDLAVEHSI 127
+ +SP G + E + H+LV+ + ++++ R + QG D ++ E S
Sbjct: 182 NQANSPAGNE-EYRIAHILVQISEQMDEAQIEARHKRAETAYESLRQGADFVRVSAEFSD 240
Query: 128 CPSKGEGGMLGWVRKGQLVPEFEEVAFTTPLNKVA-RCKTKFGWHLLQVLSERE 180
P +GG LGW GQL F E+ +V ++ G+H+L++L R+
Sbjct: 241 APDAMQGGELGWRPLGQLGSPFTEMLVNMQPGEVTPVVRSPVGFHILKLLERRQ 294
>sp|Q68WG0|PLP_RICTY Parvulin-like PPIase OS=Rickettsia typhi (strain ATCC VR-144 /
Wilmington) GN=plp PE=3 SV=2
Length = 282
Score = 64.7 bits (156), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 63/100 (63%), Gaps = 9/100 (9%)
Query: 86 GDREILVQHLLVK-EDDLNLLSELQRRVSQGEDLSDLAVEHSICPSKG-EGGMLGWV--- 140
G +I V H+LVK + + N + + ++S+G + + LA E S+ + GG++G++
Sbjct: 137 GKEQIKVAHILVKSQKEANTV---KTKLSKGGNFNKLAEEFSLDKATASNGGVIGYIILN 193
Query: 141 RKGQLVPEFEEVAFTTPLNKVAR-CKTKFGWHLLQVLSER 179
+ GQLVPEFE AF +N+V+ KT FGWH+++VL ++
Sbjct: 194 QSGQLVPEFENKAFALKVNEVSTPVKTDFGWHIIKVLEKK 233
>sp|Q88A44|SURA_PSESM Chaperone SurA OS=Pseudomonas syringae pv. tomato (strain DC3000)
GN=surA PE=3 SV=1
Length = 428
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 75/146 (51%), Gaps = 12/146 (8%)
Query: 89 EILVQHLLVK------EDDLNLLSE-LQRRVSQGEDLSDLAVEHSICPSKG-EGGMLGWV 140
E+ V+H+L+K E+ LL++ + R+ GED + LA S P GG L WV
Sbjct: 278 EVHVRHILIKPSEIRSEEATKLLAQKIYERIENGEDFATLAKSFSEDPGSALNGGDLNWV 337
Query: 141 RKGQLVPEFEEVAFTTPLNKVAR-CKTKFGWHLLQVLSEREASLLQDIQPDELHKKMQDP 199
LVPEF +V +TP ++++ KT +GWH+L+VL R + + +++
Sbjct: 338 DPNSLVPEFRDVMSSTPQGELSKPFKTAYGWHVLEVLGRRATDATGQARDQQALSVLRNR 397
Query: 200 NFHKEAQ--LIDVREPEEVALSSLPG 223
+ +E Q L +R+ V + LPG
Sbjct: 398 KYDEELQTWLRQIRDEAYVEI-KLPG 422
Score = 37.0 bits (84), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 111 RVSQGEDLSDLAVEHSICPSKGEGGMLGWVRKGQLVPEFEEVAFTTPLNKVA-RCKTKFG 169
++ +G D + +A S + EGG +GW + QL P F ++ + P+ V +T G
Sbjct: 198 QLKKGADFAKIAATTSSSENALEGGDMGWRKAAQLPPPFGDMLSSMPIGDVTPPARTPGG 257
Query: 170 WHLLQVLSER 179
+ +L++L +R
Sbjct: 258 FIILKLLEKR 267
>sp|Q5L289|PRSA_GEOKA Foldase protein PrsA OS=Geobacillus kaustophilus (strain HTA426)
GN=prsA PE=3 SV=1
Length = 281
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 64/115 (55%), Gaps = 7/115 (6%)
Query: 90 ILVQHLLVKEDDLNLLSELQRRVSQGEDLSDLAVEHSICP-SKGEGGMLGWVRKGQLVPE 148
I H+LVK D E++ ++ +GED S LA E+S P S GG LGW G++V E
Sbjct: 136 IRASHILVK--DEKTAKEVKAKLDKGEDFSKLAKEYSQDPGSASNGGDLGWFGPGKMVKE 193
Query: 149 FEEVAFTTPLNKVAR-CKTKFGWHLLQVLSEREASLLQDIQPD---ELHKKMQDP 199
FEE A+ + +V+ KT +G+H+++V + + +++ + E+ + DP
Sbjct: 194 FEEAAYKLKVGEVSDPVKTDYGYHIIKVTDKEKKKSFNEMKDEIAFEVKRNKLDP 248
>sp|Q3SGF9|SURA_THIDA Chaperone SurA OS=Thiobacillus denitrificans (strain ATCC 25259)
GN=surA PE=3 SV=1
Length = 436
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 8/105 (7%)
Query: 92 VQHLLVKEDDL-------NLLSELQRRVSQGEDLSDLAVEHSICPSKGEGGMLGWVRKGQ 144
+H+L+K +++ N L +L+ R+ G +LA HS S +GG LGW+ G
Sbjct: 296 ARHILIKTNEITSEADARNRLLQLKERIDNGVKFDELARLHSEDASASKGGDLGWINPGD 355
Query: 145 LVPEFEEVAFTTPLNKV-ARCKTKFGWHLLQVLSEREASLLQDIQ 188
VP+FE+ +V A ++ FGWHL+QVL R+ + Q+ Q
Sbjct: 356 TVPDFEKAMNALQPGEVSAPVQSPFGWHLIQVLERRDQDVTQERQ 400
Score = 32.3 bits (72), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 112 VSQGEDLSDLAVEHSICPSKGEGGMLGWVRKGQLVPEF-EEVAFTTPLNKVARCKTKFGW 170
++ G D + L+ HS P +GG GW G+L F E + P ++ G+
Sbjct: 215 LAAGADFAQLSASHSDAPDALKGGNFGWRASGKLPALFVEALKPMQPGEISPLLRSGNGF 274
Query: 171 HLLQVLSER 179
H+L+++ +R
Sbjct: 275 HILKLVDKR 283
>sp|Q4ZMG7|SURA_PSEU2 Chaperone SurA OS=Pseudomonas syringae pv. syringae (strain B728a)
GN=surA PE=3 SV=2
Length = 428
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 73/146 (50%), Gaps = 12/146 (8%)
Query: 89 EILVQHLLVKEDDLNLLSELQR-------RVSQGEDLSDLAVEHSICPSKG-EGGMLGWV 140
E+ V+H+L+K ++ E +R R+ GED ++LA S P GG L WV
Sbjct: 278 EVHVRHILIKPSEIRNEEETKRLAQKIYDRIENGEDFAELAKSFSEDPGSALNGGDLNWV 337
Query: 141 RKGQLVPEFEEVAFTTPLNKVAR-CKTKFGWHLLQVLSEREASLLQDIQPDELHKKMQDP 199
LVPEF +V TP +++ +T++GWH+L+VL R + + +++
Sbjct: 338 DPNSLVPEFRQVMSETPQGVLSKPFQTQYGWHVLEVLGRRSTDATDQAREQQALNVLRNR 397
Query: 200 NFHKEAQ--LIDVREPEEVALSSLPG 223
+ +E Q L +R+ V + LPG
Sbjct: 398 KYDEELQTWLRQIRDEAYVEI-KLPG 422
Score = 37.4 bits (85), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 111 RVSQGEDLSDLAVEHSICPSKGEGGMLGWVRKGQLVPEFEEVAFTTPLNKVA-RCKTKFG 169
++ +G D + LA S + EGG +GW + QL P F ++ + P+ V +T G
Sbjct: 198 QLKKGADFTRLAATSSSSENALEGGDMGWRKAAQLPPPFGDMLSSMPVGDVTPPARTPGG 257
Query: 170 WHLLQVLSER 179
+ +L++L +R
Sbjct: 258 FIILKLLEKR 267
>sp|Q81GY5|PRSA1_BACCR Foldase protein PrsA 1 OS=Bacillus cereus (strain ATCC 14579 / DSM
31) GN=prsA1 PE=3 SV=1
Length = 286
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 74/132 (56%), Gaps = 8/132 (6%)
Query: 89 EILVQHLLVKEDDLNLLSELQRRVSQGEDLSDLAVEHS-ICPSKGEGGMLGWVRKGQLVP 147
EI H+LVK D +++ + QG+ +LA ++S SK +GG LG+ G++V
Sbjct: 132 EIKASHILVK--DEATAKKVKEELGQGKSFEELAKQYSEDTGSKEKGGDLGYFTAGKMVK 189
Query: 148 EFEEVAFTTPLNKVAR-CKTKFGWHLLQVLSEREAS----LLQDIQPDELHKKMQDPNFH 202
EFE+ A+ ++V+ K++FG+H+++V +E + DI+ D + KK QD F
Sbjct: 190 EFEDAAYKLKKDEVSEPVKSQFGYHIIKVTDIKEQKPFDEVKGDIKKDLVQKKAQDAAFM 249
Query: 203 KEAQLIDVREPE 214
+ + ++++ +
Sbjct: 250 NDLMMKEIKKAD 261
>sp|Q9KDN4|PRSA_BACHD Foldase protein PrsA OS=Bacillus halodurans (strain ATCC BAA-125 /
DSM 18197 / FERM 7344 / JCM 9153 / C-125) GN=prsA PE=3
SV=1
Length = 333
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 65/112 (58%), Gaps = 11/112 (9%)
Query: 89 EILVQHLLVKEDDLNLLSELQRRVSQGEDLSDLAVEHSICPS-KGEGGMLGWVRKGQLVP 147
E+ H+LV+ D E+ R+ G+D ++LA E+S+ PS + G LG+ KG +VP
Sbjct: 157 EVEASHILVE--DEETAEEVLDRLEAGDDFAELASEYSVDPSAEANNGDLGFFGKGDMVP 214
Query: 148 EFEEVAFTTPLNKVAR-CKTKFGWHLLQVLSEREASLLQDIQPDELHKKMQD 198
EFEE AF +++V+ ++ +G+H++ V +++ +EL +K+ D
Sbjct: 215 EFEEAAFNMEIDEVSEPVESTYGYHIILVTDRKDSY-------EELEEKIHD 259
>sp|Q21MS8|SURA_SACD2 Chaperone SurA OS=Saccharophagus degradans (strain 2-40 / ATCC
43961 / DSM 17024) GN=surA PE=3 SV=1
Length = 430
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 82/189 (43%), Gaps = 37/189 (19%)
Query: 38 PASFASFYKSLN------PASNSNSFHIHIISRSFTSPKAASFSSGTEGSSPGGGDREIL 91
P FA SLN P + FHI + S GG ++I+
Sbjct: 245 PTLFAELLPSLNNGDVTKPTRSQAGFHIIKLYES------------------RGGQKQIV 286
Query: 92 VQ----HLLVKEDDL-------NLLSELQRRVSQGEDLSDLAVEHS-ICPSKGEGGMLGW 139
Q H+LVK ++ L ++++++ G D ++LA HS S+ GG LGW
Sbjct: 287 NQTRARHILVKTSEILNDAKAEAKLKDIRQQILDGADFAELAKTHSEDIGSRMSGGDLGW 346
Query: 140 VRKGQLVPEFEEVAFTTPLNKVAR-CKTKFGWHLLQVLSEREASLLQDIQPDELHKKMQD 198
G VP FE+ T ++++ K++FGWH+++V RE + Q+ + +
Sbjct: 347 ATPGTFVPAFEKTMAETKEGEISQPFKSRFGWHIMKVEERREEDMTQEALRQKARNMIMS 406
Query: 199 PNFHKEAQL 207
F E Q+
Sbjct: 407 RRFEDETQI 415
Score = 33.9 bits (76), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 93 QHLLVKEDDLNLLSELQRRVSQGEDLSDLAVEHSICPSKGEGGMLGWVRKGQLVPEFEEV 152
+ ++ E+ N L E ++ G + +++A+ S PS +GG LGW + +L F E+
Sbjct: 195 EAIVEAEEKANALYE---KLKAGANFAEVAIAESNGPSALQGGDLGWRKSAELPTLFAEL 251
Query: 153 AFTTPLNKVAR-CKTKFGWHLLQVLSER 179
+ V + +++ G+H++++ R
Sbjct: 252 LPSLNNGDVTKPTRSQAGFHIIKLYESR 279
>sp|Q3K5T4|SURA_PSEPF Chaperone SurA OS=Pseudomonas fluorescens (strain Pf0-1) GN=surA
PE=3 SV=1
Length = 426
Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 75/146 (51%), Gaps = 12/146 (8%)
Query: 89 EILVQHLLVK----EDDLN---LLSELQRRVSQGEDLSDLAVEHSICPSKG-EGGMLGWV 140
E+ V+H+LVK D+ L L R+ GED ++LA ++S P GG L W+
Sbjct: 276 EVHVRHILVKPSPVRDEAKTKELAQSLYNRIEAGEDFAELAKKYSEDPGSALNGGDLNWI 335
Query: 141 RKGQLVPEFEEVAFTTPLNKVAR-CKTKFGWHLLQVLSEREASLLQDIQPDELHKKMQDP 199
LVPEF V +P ++++ +T++GWH+L+VL R + + + +++
Sbjct: 336 DPNALVPEFRAVMAKSPQGQLSKPFQTQYGWHVLEVLGRRATDSTEQAREQQAMTVLRNR 395
Query: 200 NFHKEAQ--LIDVREPEEVALSSLPG 223
+ +E Q L +R+ V + LPG
Sbjct: 396 KYDEELQTWLRQIRDEAYVEI-KLPG 420
Score = 38.9 bits (89), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 107 ELQRRVSQGEDLSDLAVEHSICPSKGEGGMLGWVRKGQLVPEFEEVAFTTPLNKVAR-CK 165
E+ +++ QG D +AV +S + EGG +GW + QL P F+ + + + +
Sbjct: 194 EVYQQLKQGADFGQMAVANSASDNALEGGDMGWRKAAQLPPPFDRELSSMATGDITQPAR 253
Query: 166 TKFGWHLLQVLSER 179
T G+ +L++L +R
Sbjct: 254 TPGGFIILKLLEKR 267
>sp|Q9I5U3|SURA_PSEAE Chaperone SurA OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1
/ 1C / PRS 101 / LMG 12228) GN=surA PE=3 SV=2
Length = 417
Score = 61.6 bits (148), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 9/100 (9%)
Query: 89 EILVQHLLVKEDDL-------NLLSELQRRVSQGEDLSDLAVEHSICPSKG-EGGMLGWV 140
E+ V+H+L+K ++ L +L R+ GED +LA S P GG L W+
Sbjct: 275 EVHVRHILLKPSEIRSEAETEKLAQKLYERIQSGEDFGELAKSFSEDPGSALNGGDLNWI 334
Query: 141 RKGQLVPEFEEVAFTTPLNKVAR-CKTKFGWHLLQVLSER 179
LVPEF +V TP ++++ +++FGWH+LQVL R
Sbjct: 335 DPEALVPEFRQVMNDTPQGELSKPFRSQFGWHILQVLGRR 374
Score = 35.8 bits (81), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 107 ELQRRVSQGEDLSDLAVEHSICPSKGEGGMLGWVRKGQLVPEFEEVAFTTPLNKVAR-CK 165
EL +++ QG D LA+ S + EGG +GW + QL F+ + + + V +
Sbjct: 193 ELYQQLKQGADFGQLAISRSAGDNALEGGEIGWRKAAQLPQPFDSMIGSLAVGDVTEPVR 252
Query: 166 TKFGWHLLQVLSEREASLLQDIQPDELH 193
T G+ +L++ +R S + DE+H
Sbjct: 253 TPGGFIILKLEEKRGGS---KMVRDEVH 277
>sp|Q223E5|SURA_RHOFD Chaperone SurA OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC
BAA-621 / T118) GN=surA PE=3 SV=1
Length = 459
Score = 61.6 bits (148), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 65/121 (53%), Gaps = 12/121 (9%)
Query: 105 LSELQRRVSQGE-DLSDLAVEHSICPSKGEGGMLGWVRKGQLVPEFEEVAFT-TPLNKVA 162
L+E ++RV+ G+ D + LA +HS S +GG LGW G VPEFE V + TP
Sbjct: 337 LNEFKKRVAAGQADFAALARDHSQDGSAAQGGDLGWANPGMFVPEFEAVMNSLTPGQISE 396
Query: 163 RCKTKFGWHLLQVLSEREASLLQDIQPDE----LHKKMQDPNFHKEAQ------LIDVRE 212
++FG HL+Q++ R+A+L Q + LH+K D + AQ +++RE
Sbjct: 397 PLVSRFGVHLIQLMERRQATLSPQEQREAVRAMLHEKKLDEAYISWAQDVRGRAYVELRE 456
Query: 213 P 213
P
Sbjct: 457 P 457
>sp|A4IKU2|PRSA_GEOTN Foldase protein PrsA OS=Geobacillus thermodenitrificans (strain
NG80-2) GN=prsA PE=3 SV=1
Length = 278
Score = 61.2 bits (147), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 52/84 (61%), Gaps = 4/84 (4%)
Query: 94 HLLVKEDDLNLLSELQRRVSQGEDLSDLAVEHSICP-SKGEGGMLGWVRKGQLVPEFEEV 152
H+LV +D E++ ++ +GED + LA E+S P S GG LGW G++V EFEE
Sbjct: 140 HILV--EDEKTAKEVKAKLDKGEDFAKLAKEYSQDPGSASNGGDLGWFGAGKMVKEFEEA 197
Query: 153 AFTTPLNKVAR-CKTKFGWHLLQV 175
A+ + +V+ KT +G+H+++V
Sbjct: 198 AYKLKVGEVSDPIKTDYGYHIIKV 221
>sp|Q81U45|PRSA1_BACAN Foldase protein PrsA 1 OS=Bacillus anthracis GN=prsA1 PE=1 SV=1
Length = 287
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 76/133 (57%), Gaps = 9/133 (6%)
Query: 89 EILVQHLLVKEDDLNLLSELQRRVSQGEDLSDLAVEHS-ICPSKGEGGMLGWVRKGQLVP 147
EI H+LVK D +++ + QG+ +LA ++S SK +GG LG+ G++V
Sbjct: 132 EIKASHILVK--DEATAKKVKEELGQGKSFEELAKQYSEDTGSKEKGGDLGFFGAGKMVK 189
Query: 148 EFEEVAFTTPLNKVAR-CKTKFGWHLLQV--LSEREASLLQ---DIQPDELHKKMQDPNF 201
EFE+ A+ ++V+ K++FG+H+++V + E E S Q DI+ + + KK QD F
Sbjct: 190 EFEDAAYKLKKDEVSEPVKSQFGYHIIKVTDIKEPEKSFEQSKADIKKELVAKKSQDGEF 249
Query: 202 HKEAQLIDVREPE 214
+ + ++++ +
Sbjct: 250 MNDLMMKEIKKAD 262
>sp|Q8CXK4|PRSA_OCEIH Foldase protein PrsA OS=Oceanobacillus iheyensis (strain DSM 14371
/ JCM 11309 / KCTC 3954 / HTE831) GN=prsA PE=3 SV=1
Length = 299
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 71/115 (61%), Gaps = 11/115 (9%)
Query: 89 EILVQHLLVK-EDDLNLLSELQRRVSQGEDLSDLAVEHSICPSKGE-GGMLGWVRKGQLV 146
EI QH+L++ E+D+ +E+Q+++ GED +LA E+S E GG LG+ G +V
Sbjct: 139 EIQAQHILLENEEDV---AEVQQKIEDGEDFGELAQEYSTDTGSAENGGDLGYFSAGSMV 195
Query: 147 PEFEEVAFTTPLNKVAR-CKTKFGWHLLQV--LSEREASL--LQDIQPDELHKKM 196
PEFEE AF+ +++ ++ G H+++V + E+E S+ +D++ EL +++
Sbjct: 196 PEFEEAAFSLEAGEISDPVQSTHGTHIIKVNDVREKEESIGEFEDVKK-ELEREI 249
>sp|Q8R760|PRSA_THETN Foldase protein PrsA OS=Thermoanaerobacter tengcongensis (strain
DSM 15242 / JCM 11007 / NBRC 100824 / MB4) GN=prsA PE=3
SV=1
Length = 306
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 54/84 (64%), Gaps = 4/84 (4%)
Query: 93 QHLLVKEDDLNLLSELQRRVSQGEDLSDLAVEHSI-CPSKGEGGMLGWVRKGQLVPEFEE 151
+H+LV D ++ +R+ +GED + LA E+SI +K GG LG G +VPEFEE
Sbjct: 171 RHILVA--DEKTAEDIYQRLMKGEDFAALAKEYSIDTATKDNGGDLGEFPHGVMVPEFEE 228
Query: 152 VAFTTPLNKVAR-CKTKFGWHLLQ 174
AF+ L ++++ KT++G+H+++
Sbjct: 229 AAFSLKLGEISKPVKTQYGYHIIK 252
>sp|Q81CB1|PRSA4_BACCR Foldase protein PrsA 4 OS=Bacillus cereus (strain ATCC 14579 / DSM
31) GN=prsA4 PE=3 SV=1
Length = 280
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 70/120 (58%), Gaps = 8/120 (6%)
Query: 92 VQHLLVKEDDLNLLSELQRRVSQGEDLSDLAVEHSICP-SKGEGGMLGWVRKGQLVPEFE 150
V H+LVK D E++ +++ GED + LA ++S P SK +GG L G +V EFE
Sbjct: 137 VSHILVK--DEKTAKEIKEKLNSGEDFAALAKQYSEDPGSKEKGGELSEFGPGMMVKEFE 194
Query: 151 EVAFTTPLNKVAR-CKTKFGWHLLQVLSERE----ASLLQDIQPDELHKKMQDPNFHKEA 205
+ A+ + +++ K+ FG+H++++ ++E ++I+ + +++QDP FH++
Sbjct: 195 DAAYKLEVGQLSEPVKSSFGYHIIKLTDKKELKPYEEEKENIRKELEQQRIQDPQFHQQV 254
>sp|Q39D35|SURA_BURS3 Chaperone SurA OS=Burkholderia sp. (strain 383) GN=surA PE=3 SV=1
Length = 452
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 105 LSELQRRVSQGEDLSDLAVEHSICPSKGEGGMLGWVRKGQLVPEFEEVAFTTPLNKVAR- 163
L++++ +V G D + A +S S +GG LGW+ G+ VPEFE ++++
Sbjct: 327 LADIRNQVEAGGDFAKFARTYSQDGSASQGGDLGWISPGETVPEFERAMNNLQDGQISQP 386
Query: 164 CKTKFGWHLLQVLSEREA 181
+T++G+HL+QVLS REA
Sbjct: 387 IRTEYGYHLIQVLSRREA 404
>sp|C5D6L9|PRSA_GEOSW Foldase protein PrsA OS=Geobacillus sp. (strain WCH70) GN=prsA PE=3
SV=1
Length = 276
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 55/93 (59%), Gaps = 4/93 (4%)
Query: 90 ILVQHLLVKEDDLNLLSELQRRVSQGEDLSDLAVEHSICP-SKGEGGMLGWVRKGQLVPE 148
I H+LVK D E++ ++ +GED + LA ++S P S GG LGW G++V E
Sbjct: 136 IRASHILVK--DEKTAEEIKTKLDKGEDFAKLAKQYSQDPGSAPNGGDLGWFGPGKMVKE 193
Query: 149 FEEVAFTTPLNKVAR-CKTKFGWHLLQVLSERE 180
FE+ A+ + +V+ KT +G+H+++V + E
Sbjct: 194 FEDAAYKLKVGQVSDPVKTDYGYHIIKVTDKEE 226
>sp|Q5P7I9|SURA_AROAE Chaperone SurA OS=Aromatoleum aromaticum (strain EbN1) GN=surA PE=3
SV=2
Length = 439
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 74/157 (47%), Gaps = 15/157 (9%)
Query: 38 PASFASFYKSLNPASNS----NSFHIHIISRSFTSPKAASFSSGTEGSSPGGGDREILVQ 93
P FA + L+P S S +S +HI+ AA+ E + R IL++
Sbjct: 249 PPLFAEAVRELSPGSVSPVLRSSAGLHIVKLLDRRGGAAAGPQQLEQTRA----RHILIR 304
Query: 94 --HLLVKEDDLNLLSELQRRVSQGEDLSDLAVEHSICPSKGEGGMLGWVRKGQLVPEFEE 151
+L + + L L+ RV G ++LA HS S +GG LGW+ G VPEFE
Sbjct: 305 TSEILNDSEAESRLLGLRERVVNGASFAELAKAHSADLSSAKGGDLGWLSPGDTVPEFER 364
Query: 152 VAFTTPLNKV-ARCKTKFGWHLLQVLSEREASLLQDI 187
+V A ++ FGWHL+QV EA LQD+
Sbjct: 365 TMNALKPGEVSAPVRSPFGWHLIQV----EARRLQDV 397
Score = 38.9 bits (89), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 109 QRRVSQGEDLSDLAVEHSICPSKGEGGMLGWVRKGQLVPEF-EEVAFTTPLNKVARCKTK 167
++R++ G+D + +A +S P GG LGW + +L P F E V +P + ++
Sbjct: 212 KQRLNSGDDFARVAASYSDAPDAMNGGALGWRSRDRLPPLFAEAVRELSPGSVSPVLRSS 271
Query: 168 FGWHLLQVLSER 179
G H++++L R
Sbjct: 272 AGLHIVKLLDRR 283
>sp|P24327|PRSA_BACSU Foldase protein PrsA OS=Bacillus subtilis (strain 168) GN=prsA PE=1
SV=1
Length = 292
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 67/121 (55%), Gaps = 6/121 (4%)
Query: 89 EILVQHLLVKEDDLNLLSELQRRVSQGEDLSDLAVEHSICPSKGEGGMLGW-VRKGQLVP 147
+I H+LV D E+++++ +GE DLA E+S S +GG LGW ++GQ+
Sbjct: 136 KIRASHILVA--DKKTAEEVEKKLKKGEKFEDLAKEYSTDSSASKGGDLGWFAKEGQMDE 193
Query: 148 EFEEVAFTTPLNKVAR-CKTKFGWHLLQVLSEREA--SLLQDIQPDELHKKMQDPNFHKE 204
F + AF +V+ KT++G+H+++ ER + ++++ + L +K+ D +E
Sbjct: 194 TFSKAAFKLKTGEVSDPVKTQYGYHIIKKTEERGKYDDMKKELKSEVLEQKLNDNAAVQE 253
Query: 205 A 205
A
Sbjct: 254 A 254
>sp|Q63X78|SURA_BURPS Chaperone SurA OS=Burkholderia pseudomallei (strain K96243) GN=surA
PE=3 SV=2
Length = 448
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 105 LSELQRRVSQGEDLSDLAVEHSICPSKGEGGMLGWVRKGQLVPEFEEVAFTTPLNKVAR- 163
L +++R++ G D A +S S +GG LGW+ G+ VPEFE T +V+
Sbjct: 326 LIDIRRQIESGGDFEKFARTYSQDGSASQGGDLGWISPGETVPEFERAMNTLQDGQVSNP 385
Query: 164 CKTKFGWHLLQVLSEREA 181
+T++G+HL+QVL R+A
Sbjct: 386 VRTEYGYHLIQVLGRRDA 403
>sp|Q3JVW8|SURA_BURP1 Chaperone SurA OS=Burkholderia pseudomallei (strain 1710b) GN=surA
PE=3 SV=1
Length = 448
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 105 LSELQRRVSQGEDLSDLAVEHSICPSKGEGGMLGWVRKGQLVPEFEEVAFTTPLNKVAR- 163
L +++R++ G D A +S S +GG LGW+ G+ VPEFE T +V+
Sbjct: 326 LIDIRRQIESGGDFEKFARTYSQDGSASQGGDLGWISPGETVPEFERAMNTLQDGQVSNP 385
Query: 164 CKTKFGWHLLQVLSEREA 181
+T++G+HL+QVL R+A
Sbjct: 386 VRTEYGYHLIQVLGRRDA 403
>sp|Q475Q3|SURA_CUPPJ Chaperone SurA OS=Cupriavidus pinatubonensis (strain JMP134 / LMG
1197) GN=surA PE=3 SV=1
Length = 499
Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 77/168 (45%), Gaps = 19/168 (11%)
Query: 38 PASFASFYKSLNPAS-------NSNSFHIHIISRSFTSPKAASFSSGTEGSSPGGGDREI 90
PA FA+ L P + ++N FHI T+ + A S+ + +
Sbjct: 300 PALFANAVVDLQPGAVAPEVVESANGFHIL----KLTAKRVAPASTSASSPAAASRITQT 355
Query: 91 LVQHLLVK-------EDDLNLLSELQRRVSQGEDLSDLAVEHSICPSKGEGGMLGWVRKG 143
V+H+L++ + L L+ R++ G D +D A S S GG LGWV G
Sbjct: 356 QVRHILIRTGPNMPEAEARRQLGTLRDRITHGGDFADAAKRFSQDGSAQAGGELGWVSPG 415
Query: 144 QLVPEFEEVAFTTPLNKVAR-CKTKFGWHLLQVLSEREASLLQDIQPD 190
+LVPEFE+ +++ T+FG HL+QV + RE + + Q D
Sbjct: 416 ELVPEFEQAMNRLRPGEISEPVVTQFGVHLIQVENRRETEMAPEKQRD 463
>sp|Q121Q4|SURA_POLSJ Chaperone SurA OS=Polaromonas sp. (strain JS666 / ATCC BAA-500)
GN=surA PE=3 SV=1
Length = 473
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 105 LSELQRRVSQGE-DLSDLAVEHSICPSKGEGGMLGWVRKGQLVPEFEEVAFTTPLNKVAR 163
L+ L++R+ G+ D + LA E+S S +GG LGW G VPEFE+V N+++
Sbjct: 351 LAALRKRILAGQADFAALARENSEDASAKQGGDLGWANPGMFVPEFEKVMNGLAPNQISD 410
Query: 164 -CKTKFGWHLLQVLSEREASLLQDIQ 188
++FG HL+QVL REA + Q Q
Sbjct: 411 PLVSRFGVHLIQVLERREAQMSQRDQ 436
Score = 39.3 bits (90), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 115 GEDLSDLAVEHSICPSKGEGGMLGWVRKGQLVPEFEEVAFTTPLNKVAR-CKTKFGWHLL 173
G D + LA E S P++G GG++G + P F E + + +A ++ G+H+L
Sbjct: 252 GADFAALANEFSDSPTRGTGGLMGLREADRYPPLFVESTKSLKVGGLAGPIRSGAGFHIL 311
Query: 174 QVLSEREASL 183
+V+ +R+A +
Sbjct: 312 KVIEKRQAGM 321
>sp|O32072|YTWF_BACSU Uncharacterized protein YtwF OS=Bacillus subtilis (strain 168)
GN=ytwF PE=4 SV=2
Length = 103
Score = 58.2 bits (139), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 56/111 (50%), Gaps = 17/111 (15%)
Query: 181 ASLLQDIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSWGPDIT 240
A+L + I+ DE E LIDVRE EEVA +P Q + +R G P+
Sbjct: 9 AALKEKIEADE------------ELYLIDVREDEEVAEGMIP--QAVHIR-MGDI-PEKM 52
Query: 241 VKFDPQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIHAYATKVDPS 291
D K+ +C GMRS+ V ++L QGF+ V NV GG+ A+ + P
Sbjct: 53 ETLDKDKEYVFICRSGMRSMNVCKYLDEQGFKTV-NVEGGMMAWEGETKPK 102
>sp|Q81DT1|PRSA3_BACCR Foldase protein PrsA 3 OS=Bacillus cereus (strain ATCC 14579 / DSM
31) GN=prsA3 PE=3 SV=1
Length = 283
Score = 58.2 bits (139), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 64/111 (57%), Gaps = 5/111 (4%)
Query: 89 EILVQHLLVKEDDLNLLSELQRRVSQGEDLSDLAVEHS-ICPSKGEGGMLGWVRKGQLVP 147
E+ V H+LVK D E++ +V+ GED + LA ++S SK +GG + GQ V
Sbjct: 134 EMKVSHILVK--DEKTAKEIKEKVNNGEDFAALANQYSEDTGSKEQGGEISGFAPGQTVK 191
Query: 148 EFEEVAFTTPLNKVAR-CKTKFGWHLLQVLSEREASLLQDIQPDELHKKMQ 197
EFEE A+ +V+ KT +G+H+++V ++E +++ D++ K ++
Sbjct: 192 EFEEAAYKLDAGQVSDPVKTTYGYHIIKVTDKKELKPFDEVK-DKIRKDIE 241
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 109,644,921
Number of Sequences: 539616
Number of extensions: 4540328
Number of successful extensions: 12399
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 285
Number of HSP's successfully gapped in prelim test: 379
Number of HSP's that attempted gapping in prelim test: 11733
Number of HSP's gapped (non-prelim): 802
length of query: 295
length of database: 191,569,459
effective HSP length: 117
effective length of query: 178
effective length of database: 128,434,387
effective search space: 22861320886
effective search space used: 22861320886
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)