Query 022540
Match_columns 295
No_of_seqs 361 out of 3162
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 07:10:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022540.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022540hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iwh_A Rhodanese-like domain p 99.9 8.2E-26 2.8E-30 169.9 8.2 100 185-292 2-101 (103)
2 3foj_A Uncharacterized protein 99.9 4.6E-25 1.6E-29 165.1 8.6 98 186-291 3-100 (100)
3 4g2p_A Chaperone SURA; structu 99.9 7.1E-25 2.4E-29 166.5 9.2 95 85-179 4-108 (110)
4 2lj4_A Peptidyl-prolyl CIS-tra 99.9 6.2E-25 2.1E-29 167.9 8.9 90 87-176 2-114 (115)
5 3gpk_A PPIC-type peptidyl-prol 99.9 9E-25 3.1E-29 166.0 8.7 96 86-181 4-106 (112)
6 3eme_A Rhodanese-like domain p 99.9 1.3E-24 4.6E-29 163.4 8.5 99 186-292 3-101 (103)
7 1jns_A Peptidyl-prolyl CIS-tra 99.9 2.7E-24 9.2E-29 158.3 8.1 89 88-178 2-91 (92)
8 3i6c_A Peptidyl-prolyl CIS-tra 99.9 3.3E-24 1.1E-28 165.5 8.9 94 83-176 8-122 (123)
9 3ui4_A Peptidyl-prolyl CIS-tra 99.9 1.2E-23 4.3E-28 157.1 8.9 89 87-178 5-100 (101)
10 3gk5_A Uncharacterized rhodane 99.9 3.6E-24 1.2E-28 162.5 5.9 98 185-293 4-101 (108)
11 1zk6_A Foldase protein PRSA; a 99.9 1E-23 3.5E-28 155.6 7.5 89 87-177 2-92 (93)
12 2pv1_A Chaperone SURA; surviVa 99.9 1.4E-23 4.8E-28 157.8 8.2 90 89-178 2-102 (103)
13 2rqs_A Parvulin-like peptidyl- 99.9 3.2E-23 1.1E-27 154.0 10.0 90 85-176 5-96 (97)
14 3i2v_A Adenylyltransferase and 99.9 1.6E-24 5.6E-29 168.8 3.0 107 186-295 2-127 (127)
15 3tc5_A Peptidyl-prolyl CIS-tra 99.9 2.4E-23 8.3E-28 169.0 9.4 120 54-176 22-165 (166)
16 3hix_A ALR3790 protein; rhodan 99.9 2.8E-24 9.7E-29 162.5 3.5 99 191-294 2-100 (106)
17 1gmx_A GLPE protein; transfera 99.9 5.7E-24 1.9E-28 161.4 3.5 98 185-291 5-102 (108)
18 2kgj_A Peptidyl-prolyl CIS-tra 99.9 1.2E-23 4.2E-28 157.5 4.7 93 88-181 2-96 (102)
19 1m5y_A SurviVal protein, survi 99.9 4.5E-23 1.5E-27 191.5 8.6 160 20-181 175-366 (408)
20 1wv9_A Rhodanese homolog TT165 99.9 4.6E-23 1.6E-27 152.4 6.3 92 186-288 3-94 (94)
21 2jzv_A Foldase protein PRSA; p 99.9 1.7E-22 6E-27 153.8 9.3 92 85-176 3-110 (111)
22 3d1p_A Putative thiosulfate su 99.9 1.3E-22 4.4E-27 160.8 8.1 109 183-293 21-138 (139)
23 1tq1_A AT5G66040, senescence-a 99.9 3.6E-23 1.2E-27 161.9 4.5 106 182-292 15-128 (129)
24 2hhg_A Hypothetical protein RP 99.9 2E-22 6.9E-27 159.6 8.4 107 184-292 21-132 (139)
25 1qxn_A SUD, sulfide dehydrogen 99.9 7.4E-23 2.5E-27 161.9 5.6 103 184-292 22-128 (137)
26 3flh_A Uncharacterized protein 99.9 2.9E-23 9.8E-28 161.4 2.7 104 184-294 14-120 (124)
27 3ilm_A ALR3790 protein; rhodan 99.9 8.2E-23 2.8E-27 162.3 4.4 100 187-291 2-101 (141)
28 1j6y_A Peptidyl-prolyl CIS-tra 99.9 7.6E-23 2.6E-27 161.6 3.9 93 84-176 21-138 (139)
29 3nhv_A BH2092 protein; alpha-b 99.9 6.7E-22 2.3E-26 157.7 8.2 102 185-292 16-119 (144)
30 1t3k_A Arath CDC25, dual-speci 99.8 5.9E-22 2E-26 159.4 5.2 105 184-292 27-140 (152)
31 2k0z_A Uncharacterized protein 99.8 1E-21 3.5E-26 149.4 5.1 87 203-292 15-101 (110)
32 1yw5_A Peptidyl prolyl CIS/tra 99.8 5.1E-21 1.7E-25 157.5 8.9 92 85-176 63-176 (177)
33 2jtq_A Phage shock protein E; 99.8 1.4E-21 4.9E-26 141.6 3.4 79 205-286 2-80 (85)
34 3g5j_A Putative ATP/GTP bindin 99.8 4E-21 1.4E-25 150.8 3.0 97 185-289 5-132 (134)
35 4f67_A UPF0176 protein LPG2838 99.8 1.2E-20 4.2E-25 164.1 5.1 105 184-292 121-227 (265)
36 2fsx_A RV0390, COG0607: rhodan 99.8 1.1E-20 3.8E-25 151.2 4.3 104 186-292 6-138 (148)
37 1vee_A Proline-rich protein fa 99.8 1.8E-20 6.3E-25 147.5 3.9 106 184-292 4-123 (134)
38 3olh_A MST, 3-mercaptopyruvate 99.8 1E-19 3.5E-24 162.4 6.3 104 186-293 176-301 (302)
39 1c25_A CDC25A; hydrolase, cell 99.8 9.2E-20 3.1E-24 147.9 3.9 107 184-291 22-145 (161)
40 1e0c_A Rhodanese, sulfurtransf 99.8 5.5E-19 1.9E-23 155.1 8.7 103 186-292 148-270 (271)
41 3rfw_A Cell-binding factor 2; 99.8 1.4E-19 4.8E-24 157.4 4.2 112 65-181 90-211 (252)
42 2j6p_A SB(V)-AS(V) reductase; 99.8 1.6E-19 5.6E-24 145.1 3.3 107 185-292 5-121 (152)
43 1urh_A 3-mercaptopyruvate sulf 99.8 3E-19 1E-23 157.6 5.2 105 185-293 152-278 (280)
44 1qb0_A Protein (M-phase induce 99.8 2.7E-19 9.2E-24 151.5 4.5 108 183-291 42-167 (211)
45 2a2k_A M-phase inducer phospha 99.8 2.7E-19 9.4E-24 147.1 4.3 108 183-291 22-147 (175)
46 1e0c_A Rhodanese, sulfurtransf 99.8 1.4E-18 4.6E-23 152.6 9.0 103 186-292 10-128 (271)
47 1rhs_A Sulfur-substituted rhod 99.7 9.7E-19 3.3E-23 155.6 6.4 103 185-291 160-286 (296)
48 1urh_A 3-mercaptopyruvate sulf 99.7 3E-18 1E-22 151.2 9.3 103 186-292 5-133 (280)
49 2vsw_A Dual specificity protei 99.7 5.7E-19 2E-23 141.9 4.2 102 185-288 4-128 (153)
50 3tp9_A Beta-lactamase and rhod 99.7 1.7E-18 5.9E-23 163.6 8.0 101 184-292 373-473 (474)
51 3op3_A M-phase inducer phospha 99.7 9.5E-19 3.2E-23 148.1 5.5 105 184-288 56-177 (216)
52 2ouc_A Dual specificity protei 99.7 5.4E-19 1.8E-23 139.8 2.7 100 187-291 3-136 (142)
53 3hzu_A Thiosulfate sulfurtrans 99.7 1.4E-18 4.8E-23 156.1 4.8 104 185-292 40-158 (318)
54 3hzu_A Thiosulfate sulfurtrans 99.7 3.9E-18 1.3E-22 153.2 7.2 101 186-292 180-307 (318)
55 3f4a_A Uncharacterized protein 99.7 1.5E-19 5E-24 147.8 -2.1 108 183-291 29-156 (169)
56 2eg4_A Probable thiosulfate su 99.7 7.4E-18 2.5E-22 144.5 8.1 96 186-292 122-229 (230)
57 1uar_A Rhodanese; sulfurtransf 99.7 6.9E-18 2.3E-22 149.2 7.7 104 185-292 146-281 (285)
58 3aay_A Putative thiosulfate su 99.7 1.4E-17 4.7E-22 146.7 8.8 100 187-292 146-274 (277)
59 3aay_A Putative thiosulfate su 99.7 3.3E-18 1.1E-22 150.6 4.7 103 186-292 7-124 (277)
60 3nrk_A LIC12922; NC domain, pa 99.7 4E-18 1.4E-22 153.5 4.3 109 67-180 141-266 (325)
61 3tg1_B Dual specificity protei 99.7 1.9E-17 6.5E-22 133.8 7.7 104 184-288 10-143 (158)
62 1rhs_A Sulfur-substituted rhod 99.7 2.6E-17 9E-22 146.3 9.3 107 186-292 9-141 (296)
63 1uar_A Rhodanese; sulfurtransf 99.7 2.4E-18 8.4E-23 152.1 2.5 103 186-292 9-126 (285)
64 1hzm_A Dual specificity protei 99.7 3.7E-18 1.3E-22 137.2 3.2 100 185-287 16-142 (154)
65 1m5y_A SurviVal protein, survi 99.7 4.6E-18 1.6E-22 157.7 3.0 113 65-180 131-255 (408)
66 1yt8_A Thiosulfate sulfurtrans 99.7 8.2E-18 2.8E-22 161.4 4.8 104 184-292 6-109 (539)
67 3ntd_A FAD-dependent pyridine 99.7 3.7E-17 1.2E-21 157.5 8.5 95 183-288 471-565 (565)
68 3ics_A Coenzyme A-disulfide re 99.7 3.2E-17 1.1E-21 158.9 6.8 99 182-290 486-584 (588)
69 1yt8_A Thiosulfate sulfurtrans 99.7 2E-17 6.8E-22 158.7 5.2 100 185-292 377-476 (539)
70 3olh_A MST, 3-mercaptopyruvate 99.7 1.1E-16 3.6E-21 142.8 8.9 107 186-292 23-156 (302)
71 2wlr_A Putative thiosulfate su 99.7 6.9E-17 2.4E-21 150.6 6.7 102 186-291 273-404 (423)
72 3utn_X Thiosulfate sulfurtrans 99.7 1.2E-16 4E-21 143.3 7.5 105 187-291 186-320 (327)
73 2wlr_A Putative thiosulfate su 99.6 9.3E-17 3.2E-21 149.7 5.9 105 187-291 126-248 (423)
74 1okg_A Possible 3-mercaptopyru 99.6 1.8E-16 6.1E-21 145.2 7.4 100 185-291 14-141 (373)
75 3r2u_A Metallo-beta-lactamase 99.6 2.4E-17 8.2E-22 155.5 0.0 80 203-286 386-465 (466)
76 1okg_A Possible 3-mercaptopyru 99.6 1.7E-16 5.9E-21 145.3 5.0 84 203-286 173-286 (373)
77 2eg4_A Probable thiosulfate su 99.6 7.1E-16 2.4E-20 132.1 5.5 80 203-286 5-98 (230)
78 1whb_A KIAA0055; deubiqutinati 99.6 6.3E-16 2.1E-20 124.7 4.0 102 184-287 14-141 (157)
79 2gwf_A Ubiquitin carboxyl-term 99.6 6.8E-16 2.3E-20 124.5 4.0 102 184-287 19-146 (157)
80 3tp9_A Beta-lactamase and rhod 99.5 3.3E-14 1.1E-18 134.3 5.4 98 183-290 271-369 (474)
81 3rgc_A Possible periplasmic pr 99.4 1.3E-14 4.4E-19 125.9 -0.9 94 66-181 114-209 (252)
82 3utn_X Thiosulfate sulfurtrans 99.2 1.2E-11 3.9E-16 110.9 8.0 104 186-291 29-158 (327)
83 3r2u_A Metallo-beta-lactamase 99.2 1.4E-11 4.9E-16 115.9 5.0 79 203-285 295-375 (466)
84 2lj4_A Peptidyl-prolyl CIS-tra 98.6 6.8E-09 2.3E-13 78.7 0.2 79 16-95 33-113 (115)
85 4g2p_A Chaperone SURA; structu 98.3 5.3E-08 1.8E-12 73.2 -0.8 78 19-96 26-105 (110)
86 3i6c_A Peptidyl-prolyl CIS-tra 98.1 2.4E-07 8.2E-12 70.9 -1.9 78 17-95 42-121 (123)
87 3gpk_A PPIC-type peptidyl-prol 98.0 2.6E-07 9E-12 69.5 -2.2 91 4-96 9-101 (112)
88 3tc5_A Peptidyl-prolyl CIS-tra 97.9 8.6E-07 3E-11 71.4 -1.7 78 17-95 85-164 (166)
89 2pv1_A Chaperone SURA; surviVa 97.7 2.8E-06 9.7E-11 62.8 -0.8 81 13-95 17-99 (103)
90 2jzv_A Foldase protein PRSA; p 97.7 2.5E-06 8.5E-11 64.1 -1.3 76 20-95 32-109 (111)
91 1zk6_A Foldase protein PRSA; a 97.6 1.4E-05 4.8E-10 57.8 1.6 70 24-95 18-90 (93)
92 1yw5_A Peptidyl prolyl CIS/tra 97.6 3.6E-06 1.2E-10 68.6 -1.8 78 17-95 96-175 (177)
93 1j6y_A Peptidyl-prolyl CIS-tra 97.6 2.7E-06 9.2E-11 66.5 -2.9 78 14-92 55-134 (139)
94 2rqs_A Parvulin-like peptidyl- 97.6 1.5E-05 5E-10 58.3 0.9 70 25-95 24-95 (97)
95 3ui4_A Peptidyl-prolyl CIS-tra 97.6 1.5E-05 5.2E-10 58.6 0.8 67 26-95 23-97 (101)
96 2kgj_A Peptidyl-prolyl CIS-tra 97.5 6.5E-06 2.2E-10 60.8 -1.3 73 22-96 17-91 (102)
97 1jns_A Peptidyl-prolyl CIS-tra 97.5 1.4E-05 4.9E-10 57.7 0.5 70 24-95 17-88 (92)
98 2f46_A Hypothetical protein; s 97.3 0.00016 5.5E-09 57.3 4.0 81 187-272 30-129 (156)
99 3nrk_A LIC12922; NC domain, pa 96.7 0.00013 4.4E-09 65.1 -1.8 76 20-96 180-262 (325)
100 3rfw_A Cell-binding factor 2; 96.4 0.00079 2.7E-08 57.6 0.9 63 36-98 143-208 (252)
101 1v8c_A MOAD related protein; r 87.5 0.048 1.6E-06 43.5 -2.1 26 205-234 122-147 (168)
102 4erc_A Dual specificity protei 84.8 0.63 2.2E-05 35.5 3.2 67 206-272 38-117 (150)
103 2img_A Dual specificity protei 74.3 1.8 6.2E-05 32.7 2.7 67 206-272 39-118 (151)
104 2nt2_A Protein phosphatase sli 69.9 3.8 0.00013 30.9 3.6 28 245-272 80-110 (145)
105 2hcm_A Dual specificity protei 68.4 5 0.00017 31.0 4.0 29 244-272 87-118 (164)
106 2e0t_A Dual specificity phosph 67.2 5.5 0.00019 30.1 4.0 28 245-272 84-114 (151)
107 2r0b_A Serine/threonine/tyrosi 65.8 5.3 0.00018 30.3 3.7 29 244-272 88-119 (154)
108 1wrm_A Dual specificity phosph 65.5 5.1 0.00018 31.0 3.6 29 244-272 81-112 (165)
109 1zzw_A Dual specificity protei 65.4 6 0.0002 29.9 3.9 28 245-272 82-112 (149)
110 1yz4_A DUSP15, dual specificit 64.8 6 0.00021 30.3 3.8 28 245-272 83-113 (160)
111 3rgo_A Protein-tyrosine phosph 64.1 5.7 0.00019 30.1 3.6 29 244-272 87-118 (157)
112 1xri_A AT1G05000; structural g 63.9 4.8 0.00017 30.5 3.1 28 245-272 91-120 (151)
113 3rgc_A Possible periplasmic pr 63.3 5.5 0.00019 33.3 3.6 46 53-98 160-206 (252)
114 2esb_A Dual specificity protei 63.1 6.9 0.00024 31.1 4.0 29 244-272 95-126 (188)
115 2hxp_A Dual specificity protei 60.3 7.5 0.00026 29.7 3.6 28 245-272 84-114 (155)
116 1rxd_A Protein tyrosine phosph 57.7 10 0.00035 28.6 4.0 28 245-272 95-124 (159)
117 2hjv_A ATP-dependent RNA helic 56.7 9.8 0.00034 29.1 3.7 37 245-282 34-70 (163)
118 2jgn_A DBX, DDX3, ATP-dependen 55.9 12 0.00041 29.5 4.2 39 244-283 44-82 (185)
119 2oud_A Dual specificity protei 54.2 10 0.00036 29.6 3.6 28 245-272 86-116 (177)
120 2wgp_A Dual specificity protei 54.1 11 0.00037 30.0 3.7 28 245-272 102-132 (190)
121 2rb4_A ATP-dependent RNA helic 53.7 9.9 0.00034 29.5 3.3 37 245-282 33-69 (175)
122 3f81_A Dual specificity protei 53.6 11 0.00039 29.4 3.7 27 246-272 115-144 (183)
123 1t5i_A C_terminal domain of A 53.0 12 0.00041 29.0 3.7 37 245-282 30-66 (172)
124 3ezz_A Dual specificity protei 52.3 13 0.00046 27.7 3.8 28 245-272 80-110 (144)
125 1jzt_A Hypothetical 27.5 kDa p 52.3 16 0.00056 30.5 4.6 30 247-277 59-91 (246)
126 2y96_A Dual specificity phosph 51.4 14 0.00049 30.1 4.1 28 244-271 137-167 (219)
127 3d3k_A Enhancer of mRNA-decapp 51.0 17 0.00058 30.7 4.6 30 247-277 86-118 (259)
128 3s4e_A Dual specificity protei 50.8 14 0.00048 27.6 3.7 29 244-272 79-110 (144)
129 1fuk_A Eukaryotic initiation f 50.7 14 0.00049 28.2 3.8 37 245-282 29-65 (165)
130 2pq5_A Dual specificity protei 50.5 15 0.0005 29.6 4.0 28 245-272 130-160 (205)
131 2g6z_A Dual specificity protei 50.1 14 0.00048 30.1 3.8 28 244-271 81-111 (211)
132 3d3j_A Enhancer of mRNA-decapp 49.7 18 0.0006 31.4 4.6 30 247-277 133-165 (306)
133 3cm3_A Late protein H1, dual s 49.3 15 0.00052 28.5 3.8 28 245-272 107-137 (176)
134 2o8n_A APOA-I binding protein; 48.3 19 0.00065 30.5 4.4 30 247-277 80-112 (265)
135 3emu_A Leucine rich repeat and 48.2 18 0.0006 27.8 4.0 29 244-272 85-116 (161)
136 3rof_A Low molecular weight pr 47.9 22 0.00077 27.5 4.5 39 247-285 7-50 (158)
137 2j16_A SDP-1, tyrosine-protein 44.7 22 0.00077 28.1 4.1 29 244-272 115-146 (182)
138 3eaq_A Heat resistant RNA depe 44.6 17 0.00058 29.3 3.5 37 245-282 30-66 (212)
139 3s4o_A Protein tyrosine phosph 42.6 25 0.00086 26.6 4.1 28 245-272 108-138 (167)
140 3nbm_A PTS system, lactose-spe 41.8 20 0.00067 25.9 3.0 29 244-272 4-36 (108)
141 2q05_A Late protein H1, dual s 41.1 25 0.00086 27.9 3.9 28 245-272 124-154 (195)
142 2l2q_A PTS system, cellobiose- 38.7 13 0.00044 26.7 1.6 27 246-272 4-34 (109)
143 3ohg_A Uncharacterized protein 38.4 30 0.001 29.7 4.1 26 256-281 218-243 (285)
144 1yn9_A BVP, polynucleotide 5'- 38.0 27 0.00093 26.8 3.6 28 245-272 112-142 (169)
145 1p8a_A Protein tyrosine phosph 37.8 6.5 0.00022 30.0 -0.1 39 247-285 5-44 (146)
146 3to5_A CHEY homolog; alpha(5)b 37.7 44 0.0015 24.8 4.6 43 243-285 9-51 (134)
147 2p6n_A ATP-dependent RNA helic 37.0 26 0.00088 27.7 3.4 36 246-282 54-89 (191)
148 4h3k_B RNA polymerase II subun 36.2 38 0.0013 27.5 4.1 29 248-277 27-56 (214)
149 3czc_A RMPB; alpha/beta sandwi 35.5 36 0.0012 24.3 3.7 26 247-272 19-49 (110)
150 4etn_A LMPTP, low molecular we 35.4 17 0.00057 29.0 1.9 39 246-285 34-77 (184)
151 1tvm_A PTS system, galactitol- 34.7 33 0.0011 24.7 3.3 28 245-272 20-52 (113)
152 1e2b_A Enzyme IIB-cellobiose; 33.0 24 0.00083 25.2 2.3 26 247-272 4-33 (106)
153 3n8i_A Low molecular weight ph 32.1 50 0.0017 25.3 4.2 40 246-285 5-50 (157)
154 3rz2_A Protein tyrosine phosph 31.4 40 0.0014 26.4 3.7 29 244-272 115-145 (189)
155 1fpz_A Cyclin-dependent kinase 30.3 35 0.0012 27.3 3.2 28 245-272 132-163 (212)
156 1d1q_A Tyrosine phosphatase (E 30.0 30 0.001 26.7 2.6 39 247-285 8-53 (161)
157 4fak_A Ribosomal RNA large sub 29.6 31 0.0011 26.9 2.6 47 240-286 68-119 (163)
158 3nme_A Ptpkis1 protein, SEX4 g 29.5 38 0.0013 28.9 3.4 22 245-266 105-128 (294)
159 1vkr_A Mannitol-specific PTS s 28.6 41 0.0014 24.8 3.0 27 245-271 12-43 (125)
160 1oyw_A RECQ helicase, ATP-depe 28.6 42 0.0014 31.2 3.7 37 245-282 235-271 (523)
161 1jl3_A Arsenate reductase; alp 28.3 51 0.0018 24.5 3.6 36 248-283 5-41 (139)
162 1to0_A Hypothetical UPF0247 pr 28.3 31 0.0011 27.0 2.4 48 240-287 64-116 (167)
163 3rh0_A Arsenate reductase; oxi 28.1 51 0.0018 25.1 3.6 37 247-283 21-58 (148)
164 4atq_A 4-aminobutyrate transam 27.8 32 0.0011 31.5 2.7 39 247-285 125-165 (456)
165 3i32_A Heat resistant RNA depe 27.8 40 0.0014 28.9 3.2 37 245-282 27-63 (300)
166 1u14_A Hypothetical UPF0244 pr 27.7 31 0.0011 27.1 2.3 41 106-146 109-150 (172)
167 3rss_A Putative uncharacterize 27.6 43 0.0015 31.1 3.6 31 245-276 51-84 (502)
168 2zfz_A Arginine repressor; DNA 27.4 44 0.0015 22.4 2.8 31 238-268 47-77 (79)
169 1xxa_A ARGR, arginine represso 27.4 49 0.0017 22.2 3.0 31 239-269 43-73 (78)
170 2i4i_A ATP-dependent RNA helic 27.3 44 0.0015 29.3 3.6 38 244-282 274-311 (417)
171 2l17_A Synarsc, arsenate reduc 27.2 51 0.0017 24.5 3.4 35 248-282 6-41 (134)
172 2v1x_A ATP-dependent DNA helic 27.1 47 0.0016 31.4 3.9 37 245-282 266-302 (591)
173 2yjt_D ATP-dependent RNA helic 33.0 13 0.00045 28.6 0.0 37 245-282 29-65 (170)
174 1b4b_A Arginine repressor; cor 25.8 40 0.0014 22.1 2.2 31 238-268 39-69 (71)
175 2c46_A MRNA capping enzyme; ph 25.5 44 0.0015 27.6 3.0 27 245-271 140-169 (241)
176 1xti_A Probable ATP-dependent 25.1 54 0.0019 28.3 3.7 37 245-282 249-285 (391)
177 3fwz_A Inner membrane protein 24.5 81 0.0028 23.0 4.1 30 249-279 9-38 (140)
178 1ohe_A CDC14B, CDC14B2 phospha 24.4 58 0.002 28.6 3.7 29 244-272 267-298 (348)
179 1jf8_A Arsenate reductase; ptp 23.4 84 0.0029 23.1 3.9 37 247-283 4-41 (131)
180 1hv8_A Putative ATP-dependent 23.3 65 0.0022 27.4 3.8 38 244-282 236-273 (367)
181 1zwy_A Hypothetical UPF0244 pr 23.2 34 0.0012 27.3 1.8 41 106-146 119-160 (185)
182 2p5m_A Arginine repressor; alp 23.2 46 0.0016 22.6 2.2 31 238-268 51-81 (83)
183 4ao9_A Beta-phenylalanine amin 22.7 45 0.0016 30.5 2.7 42 246-287 142-185 (454)
184 1s2m_A Putative ATP-dependent 22.7 62 0.0021 28.1 3.6 37 245-282 257-293 (400)
185 1ywf_A Phosphotyrosine protein 22.4 73 0.0025 27.2 3.8 27 246-272 173-201 (296)
186 2wmy_A WZB, putative acid phos 22.1 76 0.0026 24.0 3.5 35 248-283 10-45 (150)
187 1pp7_U 39 kDa initiator bindin 21.9 23 0.00078 26.1 0.4 25 264-288 85-109 (131)
188 1o6d_A Hypothetical UPF0247 pr 21.6 65 0.0022 25.0 3.0 48 240-288 59-111 (163)
189 3jx9_A Putative phosphoheptose 21.5 1.1E+02 0.0037 23.8 4.4 31 242-272 74-106 (170)
190 3pey_A ATP-dependent RNA helic 21.3 65 0.0022 27.7 3.4 37 245-282 242-278 (395)
191 3jux_A Protein translocase sub 20.9 77 0.0026 31.2 4.0 37 245-282 473-509 (822)
192 3fht_A ATP-dependent RNA helic 20.7 66 0.0022 28.0 3.3 37 245-282 265-301 (412)
193 2wja_A Putative acid phosphata 20.6 83 0.0028 24.4 3.5 36 247-283 27-63 (168)
194 2j0s_A ATP-dependent RNA helic 20.3 68 0.0023 28.0 3.4 36 246-282 276-311 (410)
195 2fsf_A Preprotein translocase 20.3 85 0.0029 31.2 4.2 38 244-282 439-476 (853)
196 3llv_A Exopolyphosphatase-rela 20.3 1.1E+02 0.0038 22.0 4.1 29 250-279 9-37 (141)
197 1fpr_A Protein-tyrosine phosph 20.2 66 0.0023 27.1 3.1 19 244-262 202-221 (284)
No 1
>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A
Probab=99.92 E-value=8.2e-26 Score=169.90 Aligned_cols=100 Identities=30% Similarity=0.567 Sum_probs=88.8
Q ss_pred ccccchhhhhhccCCCccccceeecCcchhHHhhcCCCCccccCccccCCCCccccccCCCCCcEEEEeCCChhHHHHHH
Q 022540 185 QDIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSWGPDITVKFDPQKDTYVMCHHGMRSLQVAQ 264 (295)
Q Consensus 185 ~~is~~el~~~L~~~~~~~~~~iiDvR~~~e~~~ghIpgAinip~~~l~~~~~~~~~~~~~~~~ivv~C~~g~rs~~aa~ 264 (295)
..++++++++.+.+. +.+.|||||++.||..||||||+|||++.|... +..++++++|||||++|.||..++.
T Consensus 2 k~Is~~el~~~l~~~---~~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~~----~~~l~~~~~ivv~C~~G~rS~~aa~ 74 (103)
T 3iwh_A 2 KSITTDELKNKLLES---KPVQIVDVRTDEETAMGYIPNAKLIPMDTIPDN----LNSFNKNEIYYIVCAGGVRSAKVVE 74 (103)
T ss_dssp CEECHHHHHHGGGSS---SCCEEEECSCHHHHTTCBCTTCEECCGGGGGGC----GGGCCTTSEEEEECSSSSHHHHHHH
T ss_pred CCcCHHHHHHHHhCC---CCeEEEECCChhHHhcCccCCcccCcccchhhh----hhhhcCCCeEEEECCCCHHHHHHHH
Confidence 357889999988764 567899999999999999999999999988654 4557899999999999999999999
Q ss_pred HHHHcCCCceEEccccHhhcccccCCCC
Q 022540 265 WLQTQGFRRVFNVSGGIHAYATKVDPSI 292 (295)
Q Consensus 265 ~L~~~G~~~v~~l~GG~~~W~~~~~p~~ 292 (295)
.|++.||++ ++|.||+.+|..+++|..
T Consensus 75 ~L~~~G~~~-~~l~GG~~~W~~~g~pve 101 (103)
T 3iwh_A 75 YLEANGIDA-VNVEGGMHAWGDEGLEIK 101 (103)
T ss_dssp HHHTTTCEE-EEETTHHHHHCSSSCBCC
T ss_pred HHHHcCCCE-EEecChHHHHHHCCCcce
Confidence 999999965 579999999999999875
No 2
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=99.92 E-value=4.6e-25 Score=165.09 Aligned_cols=98 Identities=29% Similarity=0.548 Sum_probs=87.9
Q ss_pred cccchhhhhhccCCCccccceeecCcchhHHhhcCCCCccccCccccCCCCccccccCCCCCcEEEEeCCChhHHHHHHH
Q 022540 186 DIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSWGPDITVKFDPQKDTYVMCHHGMRSLQVAQW 265 (295)
Q Consensus 186 ~is~~el~~~L~~~~~~~~~~iiDvR~~~e~~~ghIpgAinip~~~l~~~~~~~~~~~~~~~~ivv~C~~g~rs~~aa~~ 265 (295)
.++++++.+++.+. ++..|||||++.||..||||||+|+|+..+... +..++++++|||||++|.||..++..
T Consensus 3 ~is~~el~~~l~~~---~~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~~----~~~l~~~~~ivvyC~~g~rs~~a~~~ 75 (100)
T 3foj_A 3 SITVTELKEKILDA---NPVNIVDVRTDQETAMGIIPGAETIPMNSIPDN----LNYFNDNETYYIICKAGGRSAQVVQY 75 (100)
T ss_dssp EECHHHHHHGGGSS---SCCEEEECSCHHHHTTCBCTTCEECCGGGGGGC----GGGSCTTSEEEEECSSSHHHHHHHHH
T ss_pred ccCHHHHHHHHhcC---CCcEEEECCCHHHHhcCcCCCCEECCHHHHHHH----HHhCCCCCcEEEEcCCCchHHHHHHH
Confidence 47788999988543 578999999999999999999999999988654 45568999999999999999999999
Q ss_pred HHHcCCCceEEccccHhhcccccCCC
Q 022540 266 LQTQGFRRVFNVSGGIHAYATKVDPS 291 (295)
Q Consensus 266 L~~~G~~~v~~l~GG~~~W~~~~~p~ 291 (295)
|+..|| +|++|+||+.+|..++.|+
T Consensus 76 L~~~G~-~v~~l~GG~~~W~~~g~pv 100 (100)
T 3foj_A 76 LEQNGV-NAVNVEGGMDEFGDEGLEH 100 (100)
T ss_dssp HHTTTC-EEEEETTHHHHHCSSSCBC
T ss_pred HHHCCC-CEEEecccHHHHHHcCCCC
Confidence 999999 9999999999999998874
No 3
>4g2p_A Chaperone SURA; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, pcsep; 1.82A {Salmonella enterica subsp}
Probab=99.91 E-value=7.1e-25 Score=166.54 Aligned_cols=95 Identities=27% Similarity=0.508 Sum_probs=88.6
Q ss_pred CCCccEEEeeEEeccc-------hHHHHHHHHHHhcCCC-cHHHHHHHhCCCC-CccCCCccccccCCCCcHHHHHHHHh
Q 022540 85 GGDREILVQHLLVKED-------DLNLLSELQRRVSQGE-DLSDLAVEHSICP-SKGEGGMLGWVRKGQLVPEFEEVAFT 155 (295)
Q Consensus 85 ~~~~~~~~~hIl~~~~-------~~~~a~~~~~~i~~g~-~F~~~a~~~S~~~-~~~~gG~lg~~~~~~~~~~~~~~~~~ 155 (295)
...++|+++||||+.+ ++++|++++++|++|+ +|++||++||+|+ ++.+||+|||+..++|+|+|.+++|+
T Consensus 4 ~~~~~v~~~hIli~~~~~~~~~~a~~~a~~i~~~l~~G~~~F~~lA~~~S~d~~s~~~GG~lG~~~~~~l~~~f~~a~~~ 83 (110)
T 4g2p_A 4 ISVTEVHARHILLKPSPIMNDQQARLKLEEIAADIKSGKTTFAAAAKEYSQDPGSANQGGDLGWATPDIFDPAFRDALTK 83 (110)
T ss_dssp CCCEEEEEEEEEECCCSSSCHHHHHHHHHHHHHHHHTTSSCHHHHHHHHCCCTTTGGGTTEEEEECGGGSCHHHHHHHHT
T ss_pred ccccEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHcCcccHHHHHHHhCCCccccccccccCeecccccCHHHHHHHHc
Confidence 4578999999999963 3678999999999999 9999999999998 99999999999999999999999999
Q ss_pred CCCCccc-cccccceeEEEeeehhh
Q 022540 156 TPLNKVA-RCKTKFGWHLLQVLSER 179 (295)
Q Consensus 156 l~~G~vs-pv~~~~G~~ii~v~~~~ 179 (295)
|++|++| ||++++||||+++.+++
T Consensus 84 l~~Geis~pv~t~~G~hIikv~~~r 108 (110)
T 4g2p_A 84 LHKGQISAPVHSSFGWHLIELLDTR 108 (110)
T ss_dssp CCTTCBCCCEEETTEEEEEEEEEEE
T ss_pred CCCCCcCccEEECCEEEEEEEEEEe
Confidence 9999999 99999999999998865
No 4
>2lj4_A Peptidyl-prolyl CIS-trans isomerase/rotamase, PUT; tbpin1; NMR {Trypanosoma brucei}
Probab=99.91 E-value=6.2e-25 Score=167.87 Aligned_cols=90 Identities=27% Similarity=0.505 Sum_probs=83.1
Q ss_pred CccEEEeeEEeccc---------------------hHHHHHHHHHHhcCCC-cHHHHHHHhCCCCCccCCCccccccCCC
Q 022540 87 DREILVQHLLVKED---------------------DLNLLSELQRRVSQGE-DLSDLAVEHSICPSKGEGGMLGWVRKGQ 144 (295)
Q Consensus 87 ~~~~~~~hIl~~~~---------------------~~~~a~~~~~~i~~g~-~F~~~a~~~S~~~~~~~gG~lg~~~~~~ 144 (295)
+++++++||||+.+ +++++++++++|++|+ +|+++|++||+++++.+||+|||+..++
T Consensus 2 pe~vrasHILi~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~~i~~g~~~F~~lA~~~Sd~~sa~~GGdLG~~~~~~ 81 (115)
T 2lj4_A 2 SEKLRAAHLLVKFSGSRNPVSRRTGDSTADVTYEDAIKELQKWSQRIASGEVSFEEAASQRSDCGSYASGGDLGFFSSGE 81 (115)
T ss_dssp CCEEEEEEEEECCTTSSCCCCTTTSSCCTTSCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHCCSGGGGTTSEEEEEETTS
T ss_pred CCcEEEEEEEEecCCccChhhhhhccccccccHHHHHHHHHHHHHHHHcCchhHHHHHHHhCCCcccccCCccceecCCC
Confidence 57899999999632 3567999999999996 9999999999888999999999999999
Q ss_pred CcHHHHHHHHhCCCCccc-cccccceeEEEeee
Q 022540 145 LVPEFEEVAFTTPLNKVA-RCKTKFGWHLLQVL 176 (295)
Q Consensus 145 ~~~~~~~~~~~l~~G~vs-pv~~~~G~~ii~v~ 176 (295)
|+|+|++++|+|++|++| ||+|++|||||+++
T Consensus 82 ~~~~f~~a~~~l~~GeiS~pv~t~~G~HIIkl~ 114 (115)
T 2lj4_A 82 MMKPFEDAVRALKIGDISPIVQTDSGLHIIKRL 114 (115)
T ss_dssp SCHHHHHHHTTSCBTCBCCCEECSSSEEEEEEC
T ss_pred CCchHHHHHhcCCCCCCCCcEEeCCeEEEEEEe
Confidence 999999999999999999 99999999999875
No 5
>3gpk_A PPIC-type peptidyl-prolyl CIS-trans isomerase; rotamase,ppiase domain, 11189O3,PSI2., structural genomics; 1.55A {Novosphingobium aromaticivorans}
Probab=99.91 E-value=9e-25 Score=165.97 Aligned_cols=96 Identities=22% Similarity=0.381 Sum_probs=88.6
Q ss_pred CCccEEEeeEEeccc------hHHHHHHHHHHhcCCCcHHHHHHHhCCCCCccCCCccccccCCCCcHHHHHHHHhCCCC
Q 022540 86 GDREILVQHLLVKED------DLNLLSELQRRVSQGEDLSDLAVEHSICPSKGEGGMLGWVRKGQLVPEFEEVAFTTPLN 159 (295)
Q Consensus 86 ~~~~~~~~hIl~~~~------~~~~a~~~~~~i~~g~~F~~~a~~~S~~~~~~~gG~lg~~~~~~~~~~~~~~~~~l~~G 159 (295)
.+++|+++||||+.. ++++|++++++|++|++|++||++||+|+++.+||+|||+..++++|+|.+++|+|++|
T Consensus 4 ~~~~~~v~hIli~~~~~~~~~a~~~A~~i~~~l~~G~~F~~lA~~~S~d~sa~~GGdlG~~~~~~l~~~f~~a~~~l~~G 83 (112)
T 3gpk_A 4 GTEEYRIGEIFLAATEENKPQVFANAEKIVEQLKQGGSFVAYARQYSEASTAAVGGDLGWIRLAQLPTELATTAASMGPG 83 (112)
T ss_dssp -CCEEEEEEEEEECCGGGHHHHHHHHHHHHHHHHTTCCHHHHHHHHCCSTTGGGTTEEEEECGGGSCHHHHHHHHHCCTT
T ss_pred CCcEEEEEEEEEeCChhhHHHHHHHHHHHHHHHHCCCCHHHHHHHhCCCcchhcCcccceEcccccCHHHHHHHHhCCCC
Confidence 467999999999965 24679999999999999999999999999999999999999999999999999999999
Q ss_pred ccc-cccccceeEEEeeehhhhh
Q 022540 160 KVA-RCKTKFGWHLLQVLSEREA 181 (295)
Q Consensus 160 ~vs-pv~~~~G~~ii~v~~~~~~ 181 (295)
++| ||++++||||+++.+.++.
T Consensus 84 eiS~pv~t~~G~hIikv~~~~~~ 106 (112)
T 3gpk_A 84 QLAGPVEIRGGFSILYLIDKREG 106 (112)
T ss_dssp CEEEEEEETTEEEEEEEEEEECC
T ss_pred CccceEEECCEEEEEEEEeEecc
Confidence 999 9999999999999987653
No 6
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=99.91 E-value=1.3e-24 Score=163.40 Aligned_cols=99 Identities=30% Similarity=0.570 Sum_probs=88.3
Q ss_pred cccchhhhhhccCCCccccceeecCcchhHHhhcCCCCccccCccccCCCCccccccCCCCCcEEEEeCCChhHHHHHHH
Q 022540 186 DIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSWGPDITVKFDPQKDTYVMCHHGMRSLQVAQW 265 (295)
Q Consensus 186 ~is~~el~~~L~~~~~~~~~~iiDvR~~~e~~~ghIpgAinip~~~l~~~~~~~~~~~~~~~~ivv~C~~g~rs~~aa~~ 265 (295)
.++++++.+++.+. ++..|||||++.||..||||||+|||+..|... +..++++++|||||++|.||..++..
T Consensus 3 ~is~~el~~~l~~~---~~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~~----~~~l~~~~~iv~yC~~g~rs~~a~~~ 75 (103)
T 3eme_A 3 SITTDELKNKLLES---KPVQIVDVRTDEETAMGYIPNAKLIPMDTIPDN----LNSFNKNEIYYIVCAGGVRSAKVVEY 75 (103)
T ss_dssp EECHHHHHHGGGSS---SCCEEEECSCHHHHTTCBCTTCEECCGGGGGGC----GGGCCTTSEEEEECSSSSHHHHHHHH
T ss_pred ccCHHHHHHHHhcC---CCCEEEECCCHHHHhcCcCCCCEEcCHHHHHHH----HHhCCCCCeEEEECCCChHHHHHHHH
Confidence 47788999988542 568999999999999999999999999988654 44568999999999999999999999
Q ss_pred HHHcCCCceEEccccHhhcccccCCCC
Q 022540 266 LQTQGFRRVFNVSGGIHAYATKVDPSI 292 (295)
Q Consensus 266 L~~~G~~~v~~l~GG~~~W~~~~~p~~ 292 (295)
|+..|| +|++|+||+.+|...+.|..
T Consensus 76 L~~~G~-~v~~l~GG~~~W~~~g~p~~ 101 (103)
T 3eme_A 76 LEANGI-DAVNVEGGMHAWGDEGLEIK 101 (103)
T ss_dssp HHTTTC-EEEEETTHHHHHCSSSCBCC
T ss_pred HHHCCC-CeEEeCCCHHHHHHCCCcCC
Confidence 999999 99999999999999998864
No 7
>1jns_A Peptidyl-prolyl CIS-trans isomerase C; alpha-beta sandwich, CIS peptide bond; NMR {Escherichia coli} SCOP: d.26.1.1 PDB: 1jnt_A
Probab=99.90 E-value=2.7e-24 Score=158.32 Aligned_cols=89 Identities=40% Similarity=0.758 Sum_probs=84.4
Q ss_pred ccEEEeeEEeccchHHHHHHHHHHhcCCCcHHHHHHHhCCCCCccCCCccccccCCCCcHHHHHHHHhCCCCccc-cccc
Q 022540 88 REILVQHLLVKEDDLNLLSELQRRVSQGEDLSDLAVEHSICPSKGEGGMLGWVRKGQLVPEFEEVAFTTPLNKVA-RCKT 166 (295)
Q Consensus 88 ~~~~~~hIl~~~~~~~~a~~~~~~i~~g~~F~~~a~~~S~~~~~~~gG~lg~~~~~~~~~~~~~~~~~l~~G~vs-pv~~ 166 (295)
++++++|||++.+++ |++++++|++|++|+++|++||+|+++.+||+|||+..++++++|.+++++|++|++| ||++
T Consensus 2 ~~~~~~hIl~~~~~~--A~~i~~~l~~g~~F~~lA~~~S~~~s~~~gGdlg~~~~~~l~~~f~~a~~~l~~G~is~pv~t 79 (92)
T 1jns_A 2 KTAAALHILVKEEKL--ALDLLEQIKNGADFGKLAKKHSICPSGKRGGDLGEFRQGQMVPAFDKVVFSCPVLEPTGPLHT 79 (92)
T ss_dssp CEEEEEEEEESSHHH--HHHHHHHHHHTCCHHHHHHHHHCSTTTTTGGGCCEEETTSSCHHHHHHHHHSCTTCCEEEEEE
T ss_pred CEEEEEEEEeCCHHH--HHHHHHHHHCCCCHHHHHHHhCCCcchhcCCeeeEEcCcccCHHHHHHHHhCCCCCcCCcEEE
Confidence 579999999998765 9999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred cceeEEEeeehh
Q 022540 167 KFGWHLLQVLSE 178 (295)
Q Consensus 167 ~~G~~ii~v~~~ 178 (295)
++||||+++.++
T Consensus 80 ~~G~hIi~v~~~ 91 (92)
T 1jns_A 80 QFGYHIIKVLYR 91 (92)
T ss_dssp TTEEEEEEEECC
T ss_pred CCEEEEEEEEee
Confidence 999999998764
No 8
>3i6c_A Peptidyl-prolyl CIS-trans isomerase NIMA- interacting 1; SBDD, small molecule, ppiase, cell cycle, nucleus, phosphoprotein, rotamase; HET: GIA; 1.30A {Homo sapiens} PDB: 3ik8_A 3ikd_A* 3ikg_A* 3jyj_A* 3kac_A* 1nmw_A
Probab=99.90 E-value=3.3e-24 Score=165.46 Aligned_cols=94 Identities=29% Similarity=0.469 Sum_probs=82.9
Q ss_pred CCCCCccEEEeeEEecc-------------------chHHHHHHHHHHhcCC-CcHHHHHHHhCCCCCccCCCccccccC
Q 022540 83 PGGGDREILVQHLLVKE-------------------DDLNLLSELQRRVSQG-EDLSDLAVEHSICPSKGEGGMLGWVRK 142 (295)
Q Consensus 83 ~~~~~~~~~~~hIl~~~-------------------~~~~~a~~~~~~i~~g-~~F~~~a~~~S~~~~~~~gG~lg~~~~ 142 (295)
.+..+++|+++||||+. ++++.+++|+++|++| ++|++||++||+|+++.+||+|||+..
T Consensus 8 ~~~~~~~v~~~HILi~~~~~~~p~~~~~~~~~~~~~~A~~~~~~i~~~l~~G~~~F~~lA~~~S~~~sa~~GGdLG~~~~ 87 (123)
T 3i6c_A 8 GQGEPARVRCSHLLVKHSQSRRPSSWRQEQITRTQEEALELINGYIQKIKSGEEDFESLASQFSDCSSAKARGDLGAFSR 87 (123)
T ss_dssp ---CCSEEEEEEEEECCTTSSSCCBTTBSSCCCCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHCSSGGGGGTTEEEEEET
T ss_pred ccCCCcEEEEEEEEEecCCccCccccchhhhhhHHHHHHHHHHHHHHHHHcCcccHHHHHHHhCCCchhhhCCceeeEcC
Confidence 34678899999999983 1345677777899999 699999999999889999999999999
Q ss_pred CCCcHHHHHHHHhCCCCccc-cccccceeEEEeee
Q 022540 143 GQLVPEFEEVAFTTPLNKVA-RCKTKFGWHLLQVL 176 (295)
Q Consensus 143 ~~~~~~~~~~~~~l~~G~vs-pv~~~~G~~ii~v~ 176 (295)
++|+++|.+++|+|++|++| ||++++||||+++.
T Consensus 88 ~~l~~~f~~a~f~l~~GeiS~pv~t~~G~hIi~v~ 122 (123)
T 3i6c_A 88 GQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRT 122 (123)
T ss_dssp TTSCHHHHHHHHHSCTTCBCSCEEETTEEEEEEEC
T ss_pred CCCCHHHHHHHHhCCCCCccccEEECCEEEEEEEe
Confidence 99999999999999999999 99999999999875
No 9
>3ui4_A Peptidyl-prolyl CIS-trans isomerase NIMA-interact; peptidyl-prolyl-isomerase; 0.80A {Homo sapiens} SCOP: d.26.1.1 PDB: 3ui5_A 3ui6_A 1fjd_A 1eq3_A
Probab=99.89 E-value=1.2e-23 Score=157.14 Aligned_cols=89 Identities=29% Similarity=0.590 Sum_probs=83.4
Q ss_pred CccEEEeeEEeccchHHHHHHHHHHhcCCCcHHHHHHHhCCCCCccCCCccccccCCCCcHHHHHHHHhCCCCccc----
Q 022540 87 DREILVQHLLVKEDDLNLLSELQRRVSQGEDLSDLAVEHSICPSKGEGGMLGWVRKGQLVPEFEEVAFTTPLNKVA---- 162 (295)
Q Consensus 87 ~~~~~~~hIl~~~~~~~~a~~~~~~i~~g~~F~~~a~~~S~~~~~~~gG~lg~~~~~~~~~~~~~~~~~l~~G~vs---- 162 (295)
+++|+++||+++.+++ |++++++|++|++|++||++||+|+ +.+||+|||+..++++++|.+++|+|++|++|
T Consensus 5 ~~~v~~~~Ilv~~~~~--A~~i~~~l~~G~~F~~lA~~~S~d~-a~~GGdlG~~~~~~l~~~f~~a~~~l~~G~vs~~~~ 81 (101)
T 3ui4_A 5 SNAVKVRHILCEKHGK--IMEAMEKLKSGMRFNEVAAQYSEDK-ARQGGDLGWMTRGSMVGPFQEAAFALPVSGMDKPVF 81 (101)
T ss_dssp GCEEEEEEEEESSHHH--HHHHHHHHHTTCCHHHHHHHHCSSS-GGGTTEEEEEETTSSCHHHHHHHHTSCCCBTTBCCB
T ss_pred CcEEEEEEEEECCHHH--HHHHHHHHHCCCCHHHHHHHhCcCc-hhcCCceeeEcCCCCCHHHHHHHHhCCCCCCccCcc
Confidence 5789999999998765 9999999999999999999999995 78999999999999999999999999999998
Q ss_pred ---cccccceeEEEeeehh
Q 022540 163 ---RCKTKFGWHLLQVLSE 178 (295)
Q Consensus 163 ---pv~~~~G~~ii~v~~~ 178 (295)
||++++||||+++.++
T Consensus 82 ~~~pv~t~~G~hIikv~~r 100 (101)
T 3ui4_A 82 TDPPVKTKFGYHIIMVEGR 100 (101)
T ss_dssp CSSCEEETTEEEEEEEEEE
T ss_pred cCCcEEECCEEEEEEEEee
Confidence 7999999999998864
No 10
>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}
Probab=99.89 E-value=3.6e-24 Score=162.47 Aligned_cols=98 Identities=24% Similarity=0.471 Sum_probs=87.7
Q ss_pred ccccchhhhhhccCCCccccceeecCcchhHHhhcCCCCccccCccccCCCCccccccCCCCCcEEEEeCCChhHHHHHH
Q 022540 185 QDIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSWGPDITVKFDPQKDTYVMCHHGMRSLQVAQ 264 (295)
Q Consensus 185 ~~is~~el~~~L~~~~~~~~~~iiDvR~~~e~~~ghIpgAinip~~~l~~~~~~~~~~~~~~~~ivv~C~~g~rs~~aa~ 264 (295)
..++++++.+++.+ +.|||||++.||..||||||+|||+..+... +..++++++|||||++|.||..++.
T Consensus 4 ~~is~~el~~~l~~------~~iiDvR~~~e~~~ghIpgA~~ip~~~l~~~----~~~l~~~~~ivvyC~~G~rs~~aa~ 73 (108)
T 3gk5_A 4 RSINAADLYENIKA------YTVLDVREPFELIFGSIANSINIPISELREK----WKILERDKKYAVICAHGNRSAAAVE 73 (108)
T ss_dssp CEECHHHHHHTTTT------CEEEECSCHHHHTTCBCTTCEECCHHHHHHH----GGGSCTTSCEEEECSSSHHHHHHHH
T ss_pred cEeCHHHHHHHHcC------CEEEECCCHHHHhcCcCCCCEEcCHHHHHHH----HHhCCCCCeEEEEcCCCcHHHHHHH
Confidence 45788888888763 7899999999999999999999999887543 4556899999999999999999999
Q ss_pred HHHHcCCCceEEccccHhhcccccCCCCC
Q 022540 265 WLQTQGFRRVFNVSGGIHAYATKVDPSIP 293 (295)
Q Consensus 265 ~L~~~G~~~v~~l~GG~~~W~~~~~p~~p 293 (295)
.|+..|| +|++|+||+.+|..++.|+.+
T Consensus 74 ~L~~~G~-~v~~l~GG~~~W~~~~~~~~~ 101 (108)
T 3gk5_A 74 FLSQLGL-NIVDVEGGIQSWIEEGYPVVL 101 (108)
T ss_dssp HHHTTTC-CEEEETTHHHHHHHTTCCCBC
T ss_pred HHHHcCC-CEEEEcCcHHHHHHcCCCCCC
Confidence 9999999 999999999999999998765
No 11
>1zk6_A Foldase protein PRSA; alpha/beta structure, isomerase; NMR {Bacillus subtilis}
Probab=99.89 E-value=1e-23 Score=155.59 Aligned_cols=89 Identities=31% Similarity=0.598 Sum_probs=83.1
Q ss_pred CccEEEeeEEeccchHHHHHHHHHHhcCCCcHHHHHHHhCCCCCccCCCcccccc-CCCCcHHHHHHHHhCCCCccc-cc
Q 022540 87 DREILVQHLLVKEDDLNLLSELQRRVSQGEDLSDLAVEHSICPSKGEGGMLGWVR-KGQLVPEFEEVAFTTPLNKVA-RC 164 (295)
Q Consensus 87 ~~~~~~~hIl~~~~~~~~a~~~~~~i~~g~~F~~~a~~~S~~~~~~~gG~lg~~~-~~~~~~~~~~~~~~l~~G~vs-pv 164 (295)
.++|+++|||++.++ +|++++++|++|++|+++|++||+|+++.+||+|||+. .+.++++|.+++++|++|++| ||
T Consensus 2 ~~~~~~~hIl~~~~~--~A~~i~~~l~~g~~F~~lA~~~S~~~s~~~gG~lg~~~~~~~l~~~f~~a~~~l~~G~is~pv 79 (93)
T 1zk6_A 2 SGKIRASHILVADKK--TAEEVEKKLKKGEKFEDLAKEYSTDSSASKGGDLGWFAKEGQMDETFSKAAFKLKTGEVSDPV 79 (93)
T ss_dssp -CCEEEEEEEESSHH--HHHHHHHHHHHTCCHHHHHHHHCCSGGGGGTTEEEEECTTTSSCTTHHHHHHHSCTTCBCCCE
T ss_pred CCEEEEEEEEeccHH--HHHHHHHHHHCCCCHHHHHHHhCCCchhhhCCeeeeecccccCCHHHHHHHHcCCCCCccceE
Confidence 468999999999654 49999999999999999999999999999999999999 999999999999999999999 99
Q ss_pred cccceeEEEeeeh
Q 022540 165 KTKFGWHLLQVLS 177 (295)
Q Consensus 165 ~~~~G~~ii~v~~ 177 (295)
++++||||+++.+
T Consensus 80 ~t~~G~hIi~v~~ 92 (93)
T 1zk6_A 80 KTQYGYHIIKKTE 92 (93)
T ss_dssp ECSSCEEEEEEEE
T ss_pred EECCEEEEEEEec
Confidence 9999999998864
No 12
>2pv1_A Chaperone SURA; surviVal protein A, peptidyl-prolyl CIS-trans isomerase domain, peptide, complex; 1.30A {Escherichia coli} SCOP: d.26.1.1 PDB: 2pv2_A
Probab=99.89 E-value=1.4e-23 Score=157.79 Aligned_cols=90 Identities=23% Similarity=0.393 Sum_probs=84.0
Q ss_pred cEEEeeEEeccc----------hHHHHHHHHHHhcCCCcHHHHHHHhCCCCCccCCCccccccCCCCcHHHHHHHHhCCC
Q 022540 89 EILVQHLLVKED----------DLNLLSELQRRVSQGEDLSDLAVEHSICPSKGEGGMLGWVRKGQLVPEFEEVAFTTPL 158 (295)
Q Consensus 89 ~~~~~hIl~~~~----------~~~~a~~~~~~i~~g~~F~~~a~~~S~~~~~~~gG~lg~~~~~~~~~~~~~~~~~l~~ 158 (295)
+|+++||||+.+ ++++|++++++|++|++|+++|++||+|+++.+||+|||+..++++++|.+++++|++
T Consensus 2 ~~~~~hIli~~~~~~~~~~~~~a~~~a~~i~~~l~~g~~F~~lA~~~S~~~s~~~gG~lg~~~~~~l~~~f~~a~~~l~~ 81 (103)
T 2pv1_A 2 ELNLSHILIPLPENPTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQALSTAKK 81 (103)
T ss_dssp CEEEEEEEEECCSSCCHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHCCSTTGGGTTEEEEECGGGSCHHHHHHTTTCCT
T ss_pred cEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHhCCCcccccCCccceEchhhcCHHHHHHHHcCCC
Confidence 689999999843 3578999999999999999999999999999999999999999999999999999999
Q ss_pred Cccc-cccccceeEEEeeehh
Q 022540 159 NKVA-RCKTKFGWHLLQVLSE 178 (295)
Q Consensus 159 G~vs-pv~~~~G~~ii~v~~~ 178 (295)
|++| ||++++||||+++.++
T Consensus 82 G~is~pv~t~~G~hii~v~~~ 102 (103)
T 2pv1_A 82 GDIVGPIRSGVGFHILKVNDL 102 (103)
T ss_dssp TCEEEEEEETTEEEEEEEEEE
T ss_pred CCeeccEEECCEEEEEEEEEE
Confidence 9999 9999999999998764
No 13
>2rqs_A Parvulin-like peptidyl-prolyl isomerase; CIS/trans isomerisation, cenarcheaum symbiosum, low temperat NIMA-kinase, PIN1, cell cycle; NMR {Cenarchaeum symbiosum}
Probab=99.89 E-value=3.2e-23 Score=154.03 Aligned_cols=90 Identities=33% Similarity=0.555 Sum_probs=84.0
Q ss_pred CCCccEEEeeEEeccchHHHHHHHHHHhcCCCcHHHHHHHhCCC-CCccCCCccccccCCCCcHHHHHHHHhCCCCccc-
Q 022540 85 GGDREILVQHLLVKEDDLNLLSELQRRVSQGEDLSDLAVEHSIC-PSKGEGGMLGWVRKGQLVPEFEEVAFTTPLNKVA- 162 (295)
Q Consensus 85 ~~~~~~~~~hIl~~~~~~~~a~~~~~~i~~g~~F~~~a~~~S~~-~~~~~gG~lg~~~~~~~~~~~~~~~~~l~~G~vs- 162 (295)
+.+++++++||+++.+++ |++++++|++|++|+++|++||+| +++.+||+|||+..++++++|.+++++|++|++|
T Consensus 5 ~~~~~~~~~hIl~~~~~~--A~~i~~~l~~g~~F~~lA~~~S~d~~s~~~GG~lG~~~~~~l~~~f~~a~~~l~~G~is~ 82 (97)
T 2rqs_A 5 SMADKIKCSHILVKKQGE--ALAVQERLKAGEKFGKLAKELSIDGGSAKRDGSLGYFGRGKMVKPFEDAAFRLQVGEVSE 82 (97)
T ss_dssp CCCCSEEEEEEEESCHHH--HHHHHHHHTTTCCHHHHHHHTCCCCGGGGGTTEEEEECTTSSCHHHHHHHTTCTTSCBCC
T ss_pred cccceEEEEEEEeCCHHH--HHHHHHHHHCCCCHHHHHHHhCCCCcchhcCceeeeEcCCCCCHHHHHHHHcCCCCCccc
Confidence 567899999999996554 999999999999999999999966 5999999999999999999999999999999999
Q ss_pred cccccceeEEEeee
Q 022540 163 RCKTKFGWHLLQVL 176 (295)
Q Consensus 163 pv~~~~G~~ii~v~ 176 (295)
||++++||||+++.
T Consensus 83 pv~t~~G~hIi~v~ 96 (97)
T 2rqs_A 83 PVKSEFGYHVIKRL 96 (97)
T ss_dssp CEECSSCEEEEEEC
T ss_pred cEEECCEEEEEEEe
Confidence 99999999999875
No 14
>3i2v_A Adenylyltransferase and sulfurtransferase MOCS3; rhodanese, UBA4, structural genomics, ubiquitin biology, structural genomics consortium, SGC; 1.25A {Homo sapiens}
Probab=99.89 E-value=1.6e-24 Score=168.83 Aligned_cols=107 Identities=25% Similarity=0.404 Sum_probs=89.6
Q ss_pred cccchhhhhhccCCCccccceeecCcchhHHhhcCCCCccccCccccCCCCccccc-------------cCCCCCcEEEE
Q 022540 186 DIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSWGPDITV-------------KFDPQKDTYVM 252 (295)
Q Consensus 186 ~is~~el~~~L~~~~~~~~~~iiDvR~~~e~~~ghIpgAinip~~~l~~~~~~~~~-------------~~~~~~~ivv~ 252 (295)
.++++++.+++.+. ++++|||||++.||..||||||+|||+..+......... ..+++++||||
T Consensus 2 ~is~~el~~~l~~~---~~~~liDvR~~~e~~~ghIpgA~~ip~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ivv~ 78 (127)
T 3i2v_A 2 RVSVTDYKRLLDSG---AFHLLLDVRPQVEVDICRLPHALHIPLKHLERRDAESLKLLKEAIWEEKQGTQEGAAVPIYVI 78 (127)
T ss_dssp EECHHHHHHHHHHT---CCCEEEECSCHHHHHHCCCTTSEECCHHHHHTTCHHHHHHHHHHHHHHHTTC---CCEEEEEE
T ss_pred CCCHHHHHHHHhCC---CCeEEEECCCHHHhhheecCCceeCChHHHhhhhhhhHHHHHHHHhhhcccccCCCCCeEEEE
Confidence 36788898888753 357999999999999999999999999887665433211 11234599999
Q ss_pred eCCChhHHHHHHHHHHc------CCCceEEccccHhhcccccCCCCCCC
Q 022540 253 CHHGMRSLQVAQWLQTQ------GFRRVFNVSGGIHAYATKVDPSIPTY 295 (295)
Q Consensus 253 C~~g~rs~~aa~~L~~~------G~~~v~~l~GG~~~W~~~~~p~~p~~ 295 (295)
|++|.||..++.+|+.. ||.+|++|+||+.+|..+.+|++|.|
T Consensus 79 C~~G~rs~~a~~~L~~~gg~~~~G~~~v~~l~GG~~~W~~~~~~~~p~y 127 (127)
T 3i2v_A 79 CKLGNDSQKAVKILQSLSAAQELDPLTVRDVVGGLMAWAAKIDGTFPQY 127 (127)
T ss_dssp CSSSSHHHHHHHHHHHHHHTTSSSCEEEEEETTHHHHHHHHTCTTSCCC
T ss_pred cCCCCcHHHHHHHHHHhhccccCCCceEEEecCCHHHHHHhcCCCCCCC
Confidence 99999999999999998 68899999999999999999999998
No 15
>3tc5_A Peptidyl-prolyl CIS-trans isomerase NIMA-interact; PIN1 mutant (R14A), oncogenic transformation, small molecule cycle, rotamase, phosphoprotein; HET: 3T5 P6G; 1.40A {Homo sapiens} PDB: 2itk_A* 2q5a_A* 2xp3_A* 2xp4_A* 2xp5_A* 2xp7_A* 2xp8_A* 2xp9_A* 2xpa_A* 2xpb_A* 3kab_A* 3kag_A* 3kah_A* 3kai_A* 3kce_A* 3ntp_A* 3odk_A* 3oob_A* 2zr6_A* 1f8a_B* ...
Probab=99.89 E-value=2.4e-23 Score=168.98 Aligned_cols=120 Identities=26% Similarity=0.355 Sum_probs=92.9
Q ss_pred CCcceeEecccccChHhh---hccccCCCCCCCCCCCccEEEeeEEeccc-------------------hHHHHHHHHHH
Q 022540 54 SNSFHIHIISRSFTSPKA---ASFSSGTEGSSPGGGDREILVQHLLVKED-------------------DLNLLSELQRR 111 (295)
Q Consensus 54 ~~~~~~~~~~~~~~~~e~---~~~~~~~~~~~~~~~~~~~~~~hIl~~~~-------------------~~~~a~~~~~~ 111 (295)
.|+.+|+.+....+.+|. .+|.... .....+++|+++||||+.. +++.+++++++
T Consensus 22 ~g~~yy~n~~t~~t~We~P~~~~~~~~~---~~~~~~~~v~~~HILi~~~~~~~p~~~~~~~~~~~~~~A~~~~~~i~~~ 98 (166)
T 3tc5_A 22 SGRVYYFNHITNASQWERPSGNSSSGGK---NGQGEPARVRCSHLLVKHSQSRRPSSWRQEKITRTKEEALELINGYIQK 98 (166)
T ss_dssp TCCEEEEETTTCCEESSCC----------------CCSCEEEEEEEECCTTSSSCCBTTBSSCCCCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCEEecCCCCCcccccc---cccccccceeEeeeEEecccccCccccchhhhhhHHHHHHHHHHHHHHH
Confidence 466777776655554444 1222111 1235678999999999831 34556667779
Q ss_pred hcCC-CcHHHHHHHhCCCCCccCCCccccccCCCCcHHHHHHHHhCCCCccc-cccccceeEEEeee
Q 022540 112 VSQG-EDLSDLAVEHSICPSKGEGGMLGWVRKGQLVPEFEEVAFTTPLNKVA-RCKTKFGWHLLQVL 176 (295)
Q Consensus 112 i~~g-~~F~~~a~~~S~~~~~~~gG~lg~~~~~~~~~~~~~~~~~l~~G~vs-pv~~~~G~~ii~v~ 176 (295)
|++| ++|++||++||+|+++.+||+|||+..++|+++|++++|+|++|++| ||++++|||||++.
T Consensus 99 l~~g~~~F~~lA~~~Sd~~sa~~GGdLG~~~~~~l~~~f~~a~f~l~~GeiS~pv~t~~G~hIi~v~ 165 (166)
T 3tc5_A 99 IKSGEEDFESLASQFSDCSSAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRT 165 (166)
T ss_dssp HHHTSSCHHHHHHHHCSSGGGGGTTEEEEECTTSSCHHHHHHHHHSCTTCBCCCEEETTEEEEEEEC
T ss_pred HHcCccCHHHHHHHhCcccHHhcCCccceecccccCHHHHHHHHhCCCCCCcccEEECCEEEEEEEe
Confidence 9999 59999999999988999999999999999999999999999999999 99999999999875
No 16
>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A
Probab=99.89 E-value=2.8e-24 Score=162.51 Aligned_cols=99 Identities=18% Similarity=0.329 Sum_probs=79.2
Q ss_pred hhhhhccCCCccccceeecCcchhHHhhcCCCCccccCccccCCCCccccccCCCCCcEEEEeCCChhHHHHHHHHHHcC
Q 022540 191 ELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSWGPDITVKFDPQKDTYVMCHHGMRSLQVAQWLQTQG 270 (295)
Q Consensus 191 el~~~L~~~~~~~~~~iiDvR~~~e~~~ghIpgAinip~~~l~~~~~~~~~~~~~~~~ivv~C~~g~rs~~aa~~L~~~G 270 (295)
++.+++.+.. +++.|||||++.||..||||||+|||+..+... ....++++++|||||.+|.||..++..|+..|
T Consensus 2 el~~~l~~~~--~~~~liDvR~~~e~~~ghIpgAi~ip~~~l~~~---~~~~l~~~~~ivvyc~~g~rs~~a~~~L~~~G 76 (106)
T 3hix_A 2 VLKSRLEWGE--PAFTILDVRDRSTYNDGHIMGAMAMPIEDLVDR---ASSSLEKSRDIYVYGAGDEQTSQAVNLLRSAG 76 (106)
T ss_dssp -------------CCEEEECSCHHHHHTCEETTCEECCGGGHHHH---HHHHSCTTSCEEEECSSHHHHHHHHHHHHHTT
T ss_pred hHHHHHHcCC--CCeEEEECCCHHHHhcCcCCCCEeCCHHHHHHH---HHhcCCCCCeEEEEECCCChHHHHHHHHHHcC
Confidence 4566666421 457999999999999999999999999887542 22456889999999999999999999999999
Q ss_pred CCceEEccccHhhcccccCCCCCC
Q 022540 271 FRRVFNVSGGIHAYATKVDPSIPT 294 (295)
Q Consensus 271 ~~~v~~l~GG~~~W~~~~~p~~p~ 294 (295)
|++|++|+||+.+|..++.|+.|.
T Consensus 77 ~~~v~~l~GG~~~W~~~g~~~~~~ 100 (106)
T 3hix_A 77 FEHVSELKGGLAAWKAIGGPTELE 100 (106)
T ss_dssp CSCEEECTTHHHHHHHTTCCEEEC
T ss_pred CcCEEEecCCHHHHHHCCCCCCCC
Confidence 999999999999999999987654
No 17
>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A
Probab=99.88 E-value=5.7e-24 Score=161.35 Aligned_cols=98 Identities=32% Similarity=0.528 Sum_probs=86.6
Q ss_pred ccccchhhhhhccCCCccccceeecCcchhHHhhcCCCCccccCccccCCCCccccccCCCCCcEEEEeCCChhHHHHHH
Q 022540 185 QDIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSWGPDITVKFDPQKDTYVMCHHGMRSLQVAQ 264 (295)
Q Consensus 185 ~~is~~el~~~L~~~~~~~~~~iiDvR~~~e~~~ghIpgAinip~~~l~~~~~~~~~~~~~~~~ivv~C~~g~rs~~aa~ 264 (295)
..++++++.+++.+ .+..|||||++.||..||||||+|||+..+..+ +..++++++|||||.+|.||..++.
T Consensus 5 ~~i~~~~l~~~~~~----~~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~~----~~~l~~~~~ivvyc~~g~rs~~a~~ 76 (108)
T 1gmx_A 5 ECINVADAHQKLQE----KEAVLVDIRDPQSFAMGHAVQAFHLTNDTLGAF----MRDNDFDTPVMVMCYHGNSSKGAAQ 76 (108)
T ss_dssp EEECHHHHHHHHHT----TCCEEEECSCHHHHHHCEETTCEECCHHHHHHH----HHHSCTTSCEEEECSSSSHHHHHHH
T ss_pred cccCHHHHHHHHhC----CCCEEEEcCCHHHHHhCCCccCEeCCHHHHHHH----HHhcCCCCCEEEEcCCCchHHHHHH
Confidence 45778899888876 357899999999999999999999999887543 3446899999999999999999999
Q ss_pred HHHHcCCCceEEccccHhhcccccCCC
Q 022540 265 WLQTQGFRRVFNVSGGIHAYATKVDPS 291 (295)
Q Consensus 265 ~L~~~G~~~v~~l~GG~~~W~~~~~p~ 291 (295)
.|+..||++|++|+||+.+|... .|.
T Consensus 77 ~L~~~G~~~v~~l~GG~~~W~~~-~p~ 102 (108)
T 1gmx_A 77 YLLQQGYDVVYSIDGGFEAWQRQ-FPA 102 (108)
T ss_dssp HHHHHTCSSEEEETTHHHHHHHH-CGG
T ss_pred HHHHcCCceEEEecCCHHHHHHh-CCc
Confidence 99999999999999999999887 664
No 18
>2kgj_A Peptidyl-prolyl CIS-trans isomerase D; prolyl isomerase, parvulin, cell inner membrane, cell membrane, membrane, rotamase, stress response; NMR {Escherichia coli}
Probab=99.88 E-value=1.2e-23 Score=157.49 Aligned_cols=93 Identities=16% Similarity=0.313 Sum_probs=87.2
Q ss_pred ccEEEeeEEeccchHHHHHHHHHHhcCCCcHHHHHHHhCCCC-CccCCCccccccCCCCcHHHHHHHHhCCCCccc-ccc
Q 022540 88 REILVQHLLVKEDDLNLLSELQRRVSQGEDLSDLAVEHSICP-SKGEGGMLGWVRKGQLVPEFEEVAFTTPLNKVA-RCK 165 (295)
Q Consensus 88 ~~~~~~hIl~~~~~~~~a~~~~~~i~~g~~F~~~a~~~S~~~-~~~~gG~lg~~~~~~~~~~~~~~~~~l~~G~vs-pv~ 165 (295)
++|+++|||+..+++++|++++++|++|++|++||++||+|+ ++.+||+|||+..++++++|.+++|+ ++|++| ||+
T Consensus 2 ~~~~~~hIl~~~~~~~~A~~i~~~l~~G~~F~~lA~~~S~d~~sa~~GGdlG~~~~~~l~~~f~~a~~~-~~GeiS~pv~ 80 (102)
T 2kgj_A 2 QPQRTRYSIIQTKTEDEAKAVLDELNKGGDFAALAKEKSADIISARNGGDMGWLEDATIPDELKNAGLK-EKGQLSGVIK 80 (102)
T ss_dssp CCCEEEEEEEEESSHHHHHHHHHHHHHTSCHHHHHHHTCTTHHHHTTTSEEEEEETTCCCHHHHTTCCC-STTCEEEEEE
T ss_pred CEEEEEeeecChhhHHHHHHHHHHHHCCCCHHHHHHHhCCCchhhhcCCccceecccccCHHHHHHHhc-CCCCccccEE
Confidence 578999999976667889999999999999999999999999 99999999999999999999999999 999999 999
Q ss_pred ccceeEEEeeehhhhh
Q 022540 166 TKFGWHLLQVLSEREA 181 (295)
Q Consensus 166 ~~~G~~ii~v~~~~~~ 181 (295)
+++||||+++.++++.
T Consensus 81 t~~G~hIikv~~~~~~ 96 (102)
T 2kgj_A 81 SSVGFLIVRLDDIQAA 96 (102)
T ss_dssp ETTEEEEEEEEEEECS
T ss_pred ECCEEEEEEEeecccc
Confidence 9999999999987654
No 19
>1m5y_A SurviVal protein, surviVal protein SURA; surviVal protein A, periplasmic molecular chaperone, membrane protein folding, GRAM negative bacteria; 3.00A {Escherichia coli} SCOP: a.223.1.2 d.26.1.1 d.26.1.1 PDB: 2pv3_A
Probab=99.88 E-value=4.5e-23 Score=191.46 Aligned_cols=160 Identities=18% Similarity=0.239 Sum_probs=137.0
Q ss_pred ccccccccCccchhccCCchhh-hhhccccCCCCCCCcceeEecccccChHhhhccccCCCCCCC---------------
Q 022540 20 LIPTLNLSSSSSLSIFQKPASF-ASFYKSLNPASNSNSFHIHIISRSFTSPKAASFSSGTEGSSP--------------- 83 (295)
Q Consensus 20 ~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~--------------- 83 (295)
.....+.+.+.+..+ ..|+.+ +.||.++ ++..+|++||+..+.+.++|+.+.|.++.++++.
T Consensus 175 ~~~~a~~~~~~l~~g-~~F~~lA~~~S~~~-~~~~gG~lg~~~~~~l~~~~~~~~~~l~~G~vs~pv~~~~g~~iikv~~ 252 (408)
T 1m5y_A 175 AESQARAIVDQARNG-ADFGKLAIAHSADQ-QALNGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVND 252 (408)
T ss_dssp HHHHHHHHHHHHHTT-CCHHHHHHHHCCST-TGGGTTEEEEECGGGSCHHHHTGGGTCCTTCEEEEEEETTEEEEEEEEE
T ss_pred HHHHHHHHHHHHHCC-CCHHHHHHHcCCCc-ccccCCcccccchhhccHHHHHHHHhCCCCCccCeeecCCeEEEEEEEE
Confidence 334444455556544 699999 9999998 6789999999999999999999999988776542
Q ss_pred ------CCCCccEEEeeEEeccc-------hHHHHHHHHHHhcCCC-cHHHHHHHhCCCC-CccCCCccccccCCCCcHH
Q 022540 84 ------GGGDREILVQHLLVKED-------DLNLLSELQRRVSQGE-DLSDLAVEHSICP-SKGEGGMLGWVRKGQLVPE 148 (295)
Q Consensus 84 ------~~~~~~~~~~hIl~~~~-------~~~~a~~~~~~i~~g~-~F~~~a~~~S~~~-~~~~gG~lg~~~~~~~~~~ 148 (295)
....++++++|||+++. +++++++++++|++|+ +|+++|++||.|+ ++.+||++||+..+.++|+
T Consensus 253 ~~~~~~~~~~~~~~~~~Il~~~~~~~~~~~a~~~a~~~~~~l~~g~~~f~~~A~~~s~~~~s~~~gg~lg~~~~~~~~~~ 332 (408)
T 1m5y_A 253 LRGESKNISVTEVHARHILLKPSPIMTDEQARVKLEQIAADIKSGKTTFAAAAKEFSQDPGSANQGGDLGWATPDIFDPA 332 (408)
T ss_dssp ECCCCCCCCCEEEEEEEEEECCCSSSCHHHHHHHHHHHHHHHHTTSSCHHHHHHHHCCCTTTGGGTTEEEEECGGGSCHH
T ss_pred ecCCCCcccccchhhheeeecCCCCcCHHHHHHHHHHHHHHHHcCcccHHHHHHHhCCCcchhhcCCcCcccCcccchHH
Confidence 12346899999999853 3567899999999998 9999999999998 8999999999999999999
Q ss_pred HHHHHHhCCCCccc-cccccceeEEEeeehhhhh
Q 022540 149 FEEVAFTTPLNKVA-RCKTKFGWHLLQVLSEREA 181 (295)
Q Consensus 149 ~~~~~~~l~~G~vs-pv~~~~G~~ii~v~~~~~~ 181 (295)
|.+++|+|++|++| ||.+++|||++++.+.++.
T Consensus 333 ~~~a~f~l~~G~~s~~v~~~~g~~ii~v~~~~~~ 366 (408)
T 1m5y_A 333 FRDALTRLNKGQMSAPVHSSFGWHLIELLDTRNV 366 (408)
T ss_dssp HHHHHHTCCTTCBCCCEECSSCEEEEEEEEEEEC
T ss_pred HHHHHHcCCCCCccCcEeeCCeEEEEEEeeecCC
Confidence 99999999999999 9999999999999987754
No 20
>1wv9_A Rhodanese homolog TT1651; CDC25, phosphatase, sulfurtransferase, structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=99.88 E-value=4.6e-23 Score=152.38 Aligned_cols=92 Identities=18% Similarity=0.403 Sum_probs=76.6
Q ss_pred cccchhhhhhccCCCccccceeecCcchhHHhhcCCCCccccCccccCCCCccccccCCCCCcEEEEeCCChhHHHHHHH
Q 022540 186 DIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSWGPDITVKFDPQKDTYVMCHHGMRSLQVAQW 265 (295)
Q Consensus 186 ~is~~el~~~L~~~~~~~~~~iiDvR~~~e~~~ghIpgAinip~~~l~~~~~~~~~~~~~~~~ivv~C~~g~rs~~aa~~ 265 (295)
.++++++.+++.+ +..+||||++.||..||||||+|+|+..+... +..+++ ++||+||.+|.||..++..
T Consensus 3 ~is~~~l~~~~~~-----~~~liDvR~~~e~~~ghi~gAi~ip~~~l~~~----~~~l~~-~~ivvyC~~g~rs~~a~~~ 72 (94)
T 1wv9_A 3 KVRPEELPALLEE-----GVLVVDVRPADRRSTPLPFAAEWVPLEKIQKG----EHGLPR-RPLLLVCEKGLLSQVAALY 72 (94)
T ss_dssp EECGGGHHHHHHT-----TCEEEECCCC--CCSCCSSCCEECCHHHHTTT----CCCCCS-SCEEEECSSSHHHHHHHHH
T ss_pred cCCHHHHHHHHHC-----CCEEEECCCHHHHhcccCCCCEECCHHHHHHH----HHhCCC-CCEEEEcCCCChHHHHHHH
Confidence 4678888888764 46899999999999999999999999988654 344577 9999999999999999999
Q ss_pred HHHcCCCceEEccccHhhccccc
Q 022540 266 LQTQGFRRVFNVSGGIHAYATKV 288 (295)
Q Consensus 266 L~~~G~~~v~~l~GG~~~W~~~~ 288 (295)
|+..||+ |++|+||+.+|..+|
T Consensus 73 L~~~G~~-v~~l~GG~~~W~~~G 94 (94)
T 1wv9_A 73 LEAEGYE-AMSLEGGLQALTQGK 94 (94)
T ss_dssp HHHHTCC-EEEETTGGGCC----
T ss_pred HHHcCCc-EEEEcccHHHHHhCc
Confidence 9999998 999999999998654
No 21
>2jzv_A Foldase protein PRSA; ppiase, parvulin, proline isomerase, lipoprotein, membrane, palmitate, rotamase; NMR {Staphylococcus aureus}
Probab=99.87 E-value=1.7e-22 Score=153.84 Aligned_cols=92 Identities=28% Similarity=0.451 Sum_probs=85.1
Q ss_pred CCCccEEEeeEEeccc-------------hHHHHHHHHHHhcCC-CcHHHHHHHhCCCC-CccCCCccccccCCCCcHHH
Q 022540 85 GGDREILVQHLLVKED-------------DLNLLSELQRRVSQG-EDLSDLAVEHSICP-SKGEGGMLGWVRKGQLVPEF 149 (295)
Q Consensus 85 ~~~~~~~~~hIl~~~~-------------~~~~a~~~~~~i~~g-~~F~~~a~~~S~~~-~~~~gG~lg~~~~~~~~~~~ 149 (295)
..+++|+++||||+.+ ++++|++++++|++| ++|+++|++||+|+ ++.+||+|||+..++++++|
T Consensus 3 ~~~~~~~~~hIli~~~~~~~~~~~~~~~~~~~~a~~i~~~l~~g~~~F~~lA~~~S~d~~s~~~gG~lG~~~~~~l~~~f 82 (111)
T 2jzv_A 3 LGSDSKKASHILIKVKSKKSDKEGLDDKEAKQKAEEIQKEVSKDPSKFGEIAKKESMDTGSAKKDGELGYVLKGQTDKDF 82 (111)
T ss_dssp CCCSEEEEEEEEEEBCSCSSCSSSBCHHHHHHHHHHHHHHHHSCTTSHHHHHHHHCSCHHHHTTTTEEEEEETTSSCHHH
T ss_pred CCCcEEEEEEEEEECCCCCChhhhhhHHHHHHHHHHHHHHHHcCcccHHHHHHHHCCCcchhhhCCccceecCCcccHHH
Confidence 3568999999999821 567899999999999 89999999999999 99999999999999999999
Q ss_pred HHHHHhCCCCccc-cccccceeEEEeee
Q 022540 150 EEVAFTTPLNKVA-RCKTKFGWHLLQVL 176 (295)
Q Consensus 150 ~~~~~~l~~G~vs-pv~~~~G~~ii~v~ 176 (295)
.+++|+|++|++| ||++++||||+++.
T Consensus 83 ~~a~~~l~~G~is~pv~t~~G~hIi~v~ 110 (111)
T 2jzv_A 83 EKALFKLKDGEVSEVVKSSFGYHIIKAD 110 (111)
T ss_dssp HHHHHTCCTTCBCCCEEETTEEEEEEEC
T ss_pred HHHHHhCCCCCcCccEEECCEEEEEEEe
Confidence 9999999999999 99999999999875
No 22
>3d1p_A Putative thiosulfate sulfurtransferase YOR285W; atomic structure, atomic resolution structure, PSI, MCSG; HET: MSE; 0.98A {Saccharomyces cerevisiae}
Probab=99.87 E-value=1.3e-22 Score=160.81 Aligned_cols=109 Identities=17% Similarity=0.317 Sum_probs=90.8
Q ss_pred hcccccchhhhhhccCCCccccceeecCcchhHHhhcCCCCccccCccccCCCCc----ccc-----ccCCCCCcEEEEe
Q 022540 183 LLQDIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSWGP----DIT-----VKFDPQKDTYVMC 253 (295)
Q Consensus 183 ~~~~is~~el~~~L~~~~~~~~~~iiDvR~~~e~~~ghIpgAinip~~~l~~~~~----~~~-----~~~~~~~~ivv~C 253 (295)
....++++++.+++.+.. .+..|||||++.||..||||||+|||+..+..... .+. ..++++++|||||
T Consensus 21 ~~~~is~~el~~~l~~~~--~~~~liDvR~~~e~~~ghIpgAinip~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ivvyC 98 (139)
T 3d1p_A 21 NIQSYSFEDMKRIVGKHD--PNVVLVDVREPSEYSIVHIPASINVPYRSHPDAFALDPLEFEKQIGIPKPDSAKELIFYC 98 (139)
T ss_dssp CCEECCHHHHHHHHHHTC--TTEEEEECSCHHHHHHCCCTTCEECCTTTCTTGGGSCHHHHHHHHSSCCCCTTSEEEEEC
T ss_pred CcceecHHHHHHHHhCCC--CCeEEEECcCHHHHhCCCCCCcEEcCHHHhhhhccCCHHHHHHHHhccCCCCCCeEEEEC
Confidence 345688899999886311 46799999999999999999999999988754321 000 1357889999999
Q ss_pred CCChhHHHHHHHHHHcCCCceEEccccHhhcccccCCCCC
Q 022540 254 HHGMRSLQVAQWLQTQGFRRVFNVSGGIHAYATKVDPSIP 293 (295)
Q Consensus 254 ~~g~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~~~p~~p 293 (295)
++|.||..++..|+..||++|++|+||+.+|...++|++.
T Consensus 99 ~~G~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 138 (139)
T 3d1p_A 99 ASGKRGGEAQKVASSHGYSNTSLYPGSMNDWVSHGGDKLD 138 (139)
T ss_dssp SSSHHHHHHHHHHHTTTCCSEEECTTHHHHHHHTTGGGCC
T ss_pred CCCchHHHHHHHHHHcCCCCeEEeCCcHHHHHHcCCCCCC
Confidence 9999999999999999999999999999999999998764
No 23
>1tq1_A AT5G66040, senescence-associated family protein; CESG, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: c.46.1.3
Probab=99.87 E-value=3.6e-23 Score=161.95 Aligned_cols=106 Identities=24% Similarity=0.370 Sum_probs=87.5
Q ss_pred hhcccccchhhhhhccCCCccccceeecCcchhHHhhcCCCCccccCccccCC--------CCccccccCCCCCcEEEEe
Q 022540 182 SLLQDIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGS--------WGPDITVKFDPQKDTYVMC 253 (295)
Q Consensus 182 ~~~~~is~~el~~~L~~~~~~~~~~iiDvR~~~e~~~ghIpgAinip~~~l~~--------~~~~~~~~~~~~~~ivv~C 253 (295)
.....++++++.+++. .+..|||||++.||..||||||+|||+..+.. ........++++++|||||
T Consensus 15 ~~~~~is~~e~~~~l~-----~~~~lIDvR~~~e~~~ghIpgAinip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivvyC 89 (129)
T 1tq1_A 15 RVPSSVSVTVAHDLLL-----AGHRYLDVRTPEEFSQGHACGAINVPYMNRGASGMSKNTDFLEQVSSHFGQSDNIIVGC 89 (129)
T ss_dssp CCCEEEEHHHHHHHHH-----HTCCEEEESCHHHHHHCCBTTBEECCSCCCSTTTCCCTTTHHHHHTTTCCTTSSEEEEE
T ss_pred CCCcccCHHHHHHHhc-----CCCEEEECCCHHHHhcCCCCCcEECcHhhcccccccCCHHHHHHHHhhCCCCCeEEEEC
Confidence 3445688888888876 25689999999999999999999999943321 1112233467899999999
Q ss_pred CCChhHHHHHHHHHHcCCCceEEccccHhhcccccCCCC
Q 022540 254 HHGMRSLQVAQWLQTQGFRRVFNVSGGIHAYATKVDPSI 292 (295)
Q Consensus 254 ~~g~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~~~p~~ 292 (295)
++|.||..++..|+..||++|++|+||+.+|...+.|..
T Consensus 90 ~~G~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~ 128 (129)
T 1tq1_A 90 QSGGRSIKATTDLLHAGFTGVKDIVGGYSAWAKNGLPTK 128 (129)
T ss_dssp SSCSHHHHHHHHHHHHHCCSEEEEECCHHHHHHHTCCCC
T ss_pred CCCcHHHHHHHHHHHcCCCCeEEeCCcHHHHHhCCCCCC
Confidence 999999999999999999999999999999999888864
No 24
>2hhg_A Hypothetical protein RPA3614; MCSG, structural genomics, rohopseudom palustris, PSI-2, protein structure initiative; 1.20A {Rhodopseudomonas palustris}
Probab=99.87 E-value=2e-22 Score=159.57 Aligned_cols=107 Identities=21% Similarity=0.369 Sum_probs=89.1
Q ss_pred cccccchhhhhhccCCCccccceeecCcchhHHhh-cCCCCccccCccccCCCC----ccccccCCCCCcEEEEeCCChh
Q 022540 184 LQDIQPDELHKKMQDPNFHKEAQLIDVREPEEVAL-SSLPGFQVLPLRQFGSWG----PDITVKFDPQKDTYVMCHHGMR 258 (295)
Q Consensus 184 ~~~is~~el~~~L~~~~~~~~~~iiDvR~~~e~~~-ghIpgAinip~~~l~~~~----~~~~~~~~~~~~ivv~C~~g~r 258 (295)
...++++++.+++.+.. .+..|||||++.||.. ||||||+|||+..+.... ......++++++|||||++|.|
T Consensus 21 ~~~is~~~l~~~l~~~~--~~~~liDvR~~~e~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~~~~~~~~~ivvyC~~G~r 98 (139)
T 2hhg_A 21 IETLTTADAIALHKSGA--SDVVIVDIRDPREIERDGKIPGSFSCTRGMLEFWIDPQSPYAKPIFQEDKKFVFYCAGGLR 98 (139)
T ss_dssp SEEECHHHHHHHHHTTC--TTEEEEECSCHHHHHHHCCCTTCEECCGGGHHHHHCTTSTTCCGGGGSSSEEEEECSSSHH
T ss_pred cCccCHHHHHHHHhccC--CCeEEEECCCHHHHHhCCCCCCeEECChHHHHHhcCccchhhhccCCCCCeEEEECCCChH
Confidence 45588889999887310 4678999999999999 999999999998763211 1112345789999999999999
Q ss_pred HHHHHHHHHHcCCCceEEccccHhhcccccCCCC
Q 022540 259 SLQVAQWLQTQGFRRVFNVSGGIHAYATKVDPSI 292 (295)
Q Consensus 259 s~~aa~~L~~~G~~~v~~l~GG~~~W~~~~~p~~ 292 (295)
|..++..|+..||++|++|+||+.+|...+.|..
T Consensus 99 s~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~ 132 (139)
T 2hhg_A 99 SALAAKTAQDMGLKPVAHIEGGFGAWRDAGGPIE 132 (139)
T ss_dssp HHHHHHHHHHHTCCSEEEETTHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHcCCCCeEEecCCHHHHHHCCCCee
Confidence 9999999999999999999999999999998875
No 25
>1qxn_A SUD, sulfide dehydrogenase; polysulfide-sulfur transferase, homodimer; NMR {Wolinella succinogenes} SCOP: c.46.1.3
Probab=99.87 E-value=7.4e-23 Score=161.85 Aligned_cols=103 Identities=23% Similarity=0.487 Sum_probs=89.4
Q ss_pred cccccchhhhhhcc-CCCccccceeecCcchhHHhh-cC--CCCccccCccccCCCCccccccCCCCCcEEEEeCCChhH
Q 022540 184 LQDIQPDELHKKMQ-DPNFHKEAQLIDVREPEEVAL-SS--LPGFQVLPLRQFGSWGPDITVKFDPQKDTYVMCHHGMRS 259 (295)
Q Consensus 184 ~~~is~~el~~~L~-~~~~~~~~~iiDvR~~~e~~~-gh--IpgAinip~~~l~~~~~~~~~~~~~~~~ivv~C~~g~rs 259 (295)
...++++++.+++. + ++.+|||||++.||.. || ||||+|||+..+... ..+..++++++|||||++|.||
T Consensus 22 ~~~is~~el~~~l~~~----~~~~liDVR~~~E~~~~gh~~IpgAinip~~~l~~~--~~~~~l~~~~~ivvyC~~G~rS 95 (137)
T 1qxn_A 22 MVMLSPKDAYKLLQEN----PDITLIDVRDPDELKAMGKPDVKNYKHMSRGKLEPL--LAKSGLDPEKPVVVFCKTAARA 95 (137)
T ss_dssp SEEECHHHHHHHHHHC----TTSEEEECCCHHHHHHTCEECCSSEEECCTTTSHHH--HHHHCCCTTSCEEEECCSSSCH
T ss_pred CcccCHHHHHHHHhcC----CCeEEEECCCHHHHHhcCCcCCCCCEEcchHHhhhH--HhhccCCCCCeEEEEcCCCcHH
Confidence 44588889999887 4 4679999999999999 99 999999999877431 1234568999999999999999
Q ss_pred HHHHHHHHHcCCCceEEccccHhhcccccCCCC
Q 022540 260 LQVAQWLQTQGFRRVFNVSGGIHAYATKVDPSI 292 (295)
Q Consensus 260 ~~aa~~L~~~G~~~v~~l~GG~~~W~~~~~p~~ 292 (295)
..++..|+..||++|++|+||+.+|...++|..
T Consensus 96 ~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~ 128 (137)
T 1qxn_A 96 ALAGKTLREYGFKTIYNSEGGMDKWLEEGLPSL 128 (137)
T ss_dssp HHHHHHHHHHTCSCEEEESSCHHHHHHTTCCEE
T ss_pred HHHHHHHHHcCCcceEEEcCcHHHHHHCCCCcc
Confidence 999999999999999999999999999998764
No 26
>3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A
Probab=99.87 E-value=2.9e-23 Score=161.44 Aligned_cols=104 Identities=17% Similarity=0.257 Sum_probs=89.8
Q ss_pred cccccchhhhhhccCCCccccceeecCcchhHH-hhcCCCCccccCccccCCCCccccccCCCCCcEEEEeCCChh--HH
Q 022540 184 LQDIQPDELHKKMQDPNFHKEAQLIDVREPEEV-ALSSLPGFQVLPLRQFGSWGPDITVKFDPQKDTYVMCHHGMR--SL 260 (295)
Q Consensus 184 ~~~is~~el~~~L~~~~~~~~~~iiDvR~~~e~-~~ghIpgAinip~~~l~~~~~~~~~~~~~~~~ivv~C~~g~r--s~ 260 (295)
...++++++.+++.+.. ++++|||||++.|| ..||||||+|||+..|... +..++++++|||||++|.| |.
T Consensus 14 ~~~is~~el~~~l~~~~--~~~~liDvR~~~e~~~~ghIpgA~nip~~~l~~~----~~~l~~~~~ivvyC~~g~r~~s~ 87 (124)
T 3flh_A 14 SLYIDHHTVLADMQNAT--GKYVVLDVRNAPAQVKKDQIKGAIAMPAKDLATR----IGELDPAKTYVVYDWTGGTTLGK 87 (124)
T ss_dssp TTEECHHHHHHHHHHTC--CCEEEEECCCSCHHHHCCEETTCEECCHHHHHHH----GGGSCTTSEEEEECSSSSCSHHH
T ss_pred cceecHHHHHHHHHcCC--CCEEEEECCCHHHHHhcCcCCCCEECCHHHHHHH----HhcCCCCCeEEEEeCCCCchHHH
Confidence 34588899999887631 24799999999998 9999999999999887543 4457889999999999999 89
Q ss_pred HHHHHHHHcCCCceEEccccHhhcccccCCCCCC
Q 022540 261 QVAQWLQTQGFRRVFNVSGGIHAYATKVDPSIPT 294 (295)
Q Consensus 261 ~aa~~L~~~G~~~v~~l~GG~~~W~~~~~p~~p~ 294 (295)
.++..|+..||+ |++|+||+.+|...+.|..|.
T Consensus 88 ~a~~~L~~~G~~-v~~l~GG~~~W~~~~~p~~~~ 120 (124)
T 3flh_A 88 TALLVLLSAGFE-AYELAGALEGWKGMQLPLEHH 120 (124)
T ss_dssp HHHHHHHHHTCE-EEEETTHHHHHHHTTCCEEC-
T ss_pred HHHHHHHHcCCe-EEEeCCcHHHHHHcCCCCCcc
Confidence 999999999996 999999999999999998774
No 27
>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A
Probab=99.86 E-value=8.2e-23 Score=162.35 Aligned_cols=100 Identities=18% Similarity=0.342 Sum_probs=86.8
Q ss_pred ccchhhhhhccCCCccccceeecCcchhHHhhcCCCCccccCccccCCCCccccccCCCCCcEEEEeCCChhHHHHHHHH
Q 022540 187 IQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSWGPDITVKFDPQKDTYVMCHHGMRSLQVAQWL 266 (295)
Q Consensus 187 is~~el~~~L~~~~~~~~~~iiDvR~~~e~~~ghIpgAinip~~~l~~~~~~~~~~~~~~~~ivv~C~~g~rs~~aa~~L 266 (295)
++++++.+++.+.. ++++|||||++.||..||||||+|||+..|..+ ....++++++|||||.+|.||..++..|
T Consensus 2 Is~~el~~~l~~~~--~~~~liDvR~~~e~~~ghIpgAi~ip~~~l~~~---~~~~l~~~~~ivvyC~~g~rs~~aa~~L 76 (141)
T 3ilm_A 2 SDAHVLKSRLEWGE--PAFTILDVRDRSTYNDGHIMGAMAMPIEDLVDR---ASSSLEKSRDIYVYGAGDEQTSQAVNLL 76 (141)
T ss_dssp CCHHHHHHHHHHSC--SCEEEEECSCHHHHHHCEETTCEECCGGGHHHH---HHTTSCTTSEEEEECSSHHHHHHHHHHH
T ss_pred CCHHHHHHHHhcCC--CCEEEEECCCHHHHhCCCCCCCEEcCHHHHHHH---HHhcCCCCCeEEEEECCChHHHHHHHHH
Confidence 56788888887531 357999999999999999999999999887543 1234688999999999999999999999
Q ss_pred HHcCCCceEEccccHhhcccccCCC
Q 022540 267 QTQGFRRVFNVSGGIHAYATKVDPS 291 (295)
Q Consensus 267 ~~~G~~~v~~l~GG~~~W~~~~~p~ 291 (295)
+..||++|++|+||+.+|...+.|.
T Consensus 77 ~~~G~~~v~~l~GG~~~W~~~g~p~ 101 (141)
T 3ilm_A 77 RSAGFEHVSELKGGLAAWKAIGGPT 101 (141)
T ss_dssp HHTTCCSEEECTTHHHHHHHTTCCE
T ss_pred HHcCCCCEEEecCHHHHHHHCCCCc
Confidence 9999999999999999999988875
No 28
>1j6y_A Peptidyl-prolyl CIS-trans isomerase; parvulin, PIN1, phosphorylation; NMR {Arabidopsis thaliana} SCOP: d.26.1.1
Probab=99.86 E-value=7.6e-23 Score=161.58 Aligned_cols=93 Identities=23% Similarity=0.458 Sum_probs=84.3
Q ss_pred CCCCccEEEeeEEeccc-----------------------hHHHHHHHHHHhcCCC-cHHHHHHHhCCCCCccCCCcccc
Q 022540 84 GGGDREILVQHLLVKED-----------------------DLNLLSELQRRVSQGE-DLSDLAVEHSICPSKGEGGMLGW 139 (295)
Q Consensus 84 ~~~~~~~~~~hIl~~~~-----------------------~~~~a~~~~~~i~~g~-~F~~~a~~~S~~~~~~~gG~lg~ 139 (295)
+..+++|+++||||+.+ ++++|++++++|++|+ +|++||++||+|+++.+||+|||
T Consensus 21 f~~~~~v~~~HILi~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~a~~i~~~l~~G~~~F~~lA~~~S~~~sa~~GGdLG~ 100 (139)
T 1j6y_A 21 MASRDQVKASHILIKHQGSRRKASWKDPEGKIILTTTREAAVEQLKSIREDIVSGKANFEEVATRVSDCSSAKRGGDLGS 100 (139)
T ss_dssp CSSCCSCEEECCEECSCTTSSSSSCSCCCSCCCSCCCHHHHHHHHHHHHHHHHSSCCCCHHHHHHSSCHHHHHTCSEEEE
T ss_pred cCCCCeEEEEEEEEecCccccccccccccccccchHHHHHHHHHHHHHHHHHHcCcccHHHHHHHhccCchhhcCCeeee
Confidence 36788999999999842 2456789999999998 79999999999888899999999
Q ss_pred ccCCCCcHHHHHHHHhCCCCccc-cccccceeEEEeee
Q 022540 140 VRKGQLVPEFEEVAFTTPLNKVA-RCKTKFGWHLLQVL 176 (295)
Q Consensus 140 ~~~~~~~~~~~~~~~~l~~G~vs-pv~~~~G~~ii~v~ 176 (295)
+..++|+++|.+++|+|++|++| ||++++||||+++.
T Consensus 101 ~~~~~l~~~f~~a~~~l~~GeiS~pv~t~~G~hIikv~ 138 (139)
T 1j6y_A 101 FGRGQMQKPFEEATYALKVGDISDIVDTDSGVHIIKRT 138 (139)
T ss_dssp CSSSSSCTHHHHHHHHCCSSSCCSCEEETTEEECCCSC
T ss_pred ecccccCHHHHHHHHcCCCCCccccEEECCEEEEEEEe
Confidence 99999999999999999999999 99999999999764
No 29
>3nhv_A BH2092 protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.50A {Bacillus halodurans} PDB: 3o3w_A
Probab=99.86 E-value=6.7e-22 Score=157.66 Aligned_cols=102 Identities=18% Similarity=0.244 Sum_probs=88.3
Q ss_pred ccccchhhhhhccCCCccccceeecCcchhHHhhcCCCCccccCccccCCCCccccccCCCCCcEEEEeCCC--hhHHHH
Q 022540 185 QDIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSWGPDITVKFDPQKDTYVMCHHG--MRSLQV 262 (295)
Q Consensus 185 ~~is~~el~~~L~~~~~~~~~~iiDvR~~~e~~~ghIpgAinip~~~l~~~~~~~~~~~~~~~~ivv~C~~g--~rs~~a 262 (295)
..++++++.+++.+.. ++++|||||++.||..||||||+|||+..+... .+..++++++|||||++| .||..+
T Consensus 16 ~~is~~el~~~l~~~~--~~~~liDvR~~~ey~~ghIpgAinip~~~l~~~---~~~~l~~~~~ivvyC~~g~~~rs~~a 90 (144)
T 3nhv_A 16 YETDIADLSIDIKKGY--EGIIVVDVRDAEAYKECHIPTAISIPGNKINED---TTKRLSKEKVIITYCWGPACNGATKA 90 (144)
T ss_dssp TEEEHHHHHHHHHTTC--CSEEEEECSCHHHHHHCBCTTCEECCGGGCSTT---TTTTCCTTSEEEEECSCTTCCHHHHH
T ss_pred cccCHHHHHHHHHcCC--CCEEEEECcCHHHHhcCCCCCCEECCHHHHhHH---HHhhCCCCCeEEEEECCCCccHHHHH
Confidence 3478899999887631 367999999999999999999999999988631 244568999999999998 699999
Q ss_pred HHHHHHcCCCceEEccccHhhcccccCCCC
Q 022540 263 AQWLQTQGFRRVFNVSGGIHAYATKVDPSI 292 (295)
Q Consensus 263 a~~L~~~G~~~v~~l~GG~~~W~~~~~p~~ 292 (295)
+..|+..|| +|++|+||+.+|...+.|..
T Consensus 91 a~~L~~~G~-~v~~l~GG~~~W~~~g~pv~ 119 (144)
T 3nhv_A 91 AAKFAQLGF-RVKELIGGIEYWRKENGEVE 119 (144)
T ss_dssp HHHHHHTTC-EEEEEESHHHHHHHTTCCCB
T ss_pred HHHHHHCCC-eEEEeCCcHHHHHHCCCCcc
Confidence 999999999 69999999999999998865
No 30
>1t3k_A Arath CDC25, dual-specificity tyrosine phosphatase; cell cycle, phosphorylation, plant, hydrolase; NMR {Arabidopsis thaliana} SCOP: c.46.1.1
Probab=99.84 E-value=5.9e-22 Score=159.38 Aligned_cols=105 Identities=14% Similarity=0.199 Sum_probs=89.2
Q ss_pred cccccchhhhhhccCCCccccceeecCcchhHHhhcCCCCccccCccccCCCCccccccCCCCCcEEEEeC-CChhHHHH
Q 022540 184 LQDIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSWGPDITVKFDPQKDTYVMCH-HGMRSLQV 262 (295)
Q Consensus 184 ~~~is~~el~~~L~~~~~~~~~~iiDvR~~~e~~~ghIpgAinip~~~l~~~~~~~~~~~~~~~~ivv~C~-~g~rs~~a 262 (295)
...++++++.+++.+ ++.+|||||++.||..||||||+|||+..+......+...++++++|||||+ +|.||..+
T Consensus 27 ~~~Is~~el~~~l~~----~~~~lIDvR~~~ey~~ghIpgAinip~~~l~~~~~~l~~~~~~~~~iVvyC~~~G~rs~~a 102 (152)
T 1t3k_A 27 ISYITSTQLLPLHRR----PNIAIIDVRDEERNYDGHIAGSLHYASGSFDDKISHLVQNVKDKDTLVFHSALSQVRGPTC 102 (152)
T ss_dssp SEEECTTTTTTCCCC----TTEEEEEESCSHHHHSSCCCSSEEECCSSSSTTHHHHHHTCCSCCEEEESSSCCSSSHHHH
T ss_pred CceECHHHHHHHhcC----CCEEEEECCChhhccCccCCCCEECCHHHHHHHHHHHHHhcCCCCEEEEEcCCCCcchHHH
Confidence 445788888888765 4679999999999999999999999999887654444444578999999999 99999999
Q ss_pred HHHHHH--------cCCCceEEccccHhhcccccCCCC
Q 022540 263 AQWLQT--------QGFRRVFNVSGGIHAYATKVDPSI 292 (295)
Q Consensus 263 a~~L~~--------~G~~~v~~l~GG~~~W~~~~~p~~ 292 (295)
+..|.+ .||++|++|+||+.+|...+.|..
T Consensus 103 a~~L~~~l~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~ 140 (152)
T 1t3k_A 103 ARRLVNYLDEKKEDTGIKNIMILERGFNGWEASGKPVC 140 (152)
T ss_dssp HHHHHHHHHHSSSCCCSSEEEEESSTTHHHHHHSCSSC
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEcCCHHHHHHcCCccc
Confidence 988753 899999999999999999888765
No 31
>2k0z_A Uncharacterized protein HP1203; A/B domain, structural genomics, unknown function, PSI-2, PR structure initiative; NMR {Helicobacter pylori}
Probab=99.84 E-value=1e-21 Score=149.42 Aligned_cols=87 Identities=17% Similarity=0.314 Sum_probs=76.5
Q ss_pred ccceeecCcchhHHhhcCCCCccccCccccCCCCccccccCCCCCcEEEEeCCChhHHHHHHHHHHcCCCceEEccccHh
Q 022540 203 KEAQLIDVREPEEVALSSLPGFQVLPLRQFGSWGPDITVKFDPQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIH 282 (295)
Q Consensus 203 ~~~~iiDvR~~~e~~~ghIpgAinip~~~l~~~~~~~~~~~~~~~~ivv~C~~g~rs~~aa~~L~~~G~~~v~~l~GG~~ 282 (295)
++.+|||||++.||..||||||+|||+..+...... ..++++++|||||++|.||..++..|+..||++ ++|+||+.
T Consensus 15 ~~~~liDvR~~~e~~~ghIpgAi~ip~~~l~~~~~~--~~~~~~~~ivvyC~~G~rs~~aa~~L~~~G~~~-~~l~GG~~ 91 (110)
T 2k0z_A 15 NDFIVVDVRELDEYEELHLPNATLISVNDQEKLADF--LSQHKDKKVLLHCRAGRRALDAAKSMHELGYTP-YYLEGNVY 91 (110)
T ss_dssp GGSEEEEEECHHHHHHSBCTTEEEEETTCHHHHHHH--HHSCSSSCEEEECSSSHHHHHHHHHHHHTTCCC-EEEESCGG
T ss_pred CCeEEEECCCHHHHhcCcCCCCEEcCHHHHHHHHHh--cccCCCCEEEEEeCCCchHHHHHHHHHHCCCCE-EEecCCHH
Confidence 467999999999999999999999999877543111 126789999999999999999999999999999 99999999
Q ss_pred hcccccCCCC
Q 022540 283 AYATKVDPSI 292 (295)
Q Consensus 283 ~W~~~~~p~~ 292 (295)
+|...+.|..
T Consensus 92 ~W~~~g~p~~ 101 (110)
T 2k0z_A 92 DFEKYGFRMV 101 (110)
T ss_dssp GTTTTTCCCB
T ss_pred HHHHCCCcEe
Confidence 9999988864
No 32
>1yw5_A Peptidyl prolyl CIS/trans isomerase; WW-domain, ppiase domain, ordered linker; 1.60A {Candida albicans}
Probab=99.84 E-value=5.1e-21 Score=157.48 Aligned_cols=92 Identities=39% Similarity=0.634 Sum_probs=83.0
Q ss_pred CCCccEEEeeEEeccc--------------------hHHHHHHHHHHhcCCC-cHHHHHHHhCCCCCccCCCccccccCC
Q 022540 85 GGDREILVQHLLVKED--------------------DLNLLSELQRRVSQGE-DLSDLAVEHSICPSKGEGGMLGWVRKG 143 (295)
Q Consensus 85 ~~~~~~~~~hIl~~~~--------------------~~~~a~~~~~~i~~g~-~F~~~a~~~S~~~~~~~gG~lg~~~~~ 143 (295)
..+++++++||||+.. +++.+++++++|++|+ +|++||++||+|+++.+||+|||+..+
T Consensus 63 ~~~~~~~~~hIlv~~~~~~~p~~~~~~~~~~~~~~~A~~~~~~i~~~l~~G~~~F~~lA~~~S~~~sa~~GGdLG~~~~~ 142 (177)
T 1yw5_A 63 NEDGQVRVSHLLIKNNQSRKPKSWKSPDGISRTRDESIQILKKHLERILSGEVKLSELANTESDCSSHDRGGDLGFFSKG 142 (177)
T ss_dssp CTTSCEEEEEEEECCTTSSSCCBTTBTTCCCCCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHCCSGGGGGTTEEEEECTT
T ss_pred CCcceEEEEEEEEecCCccCcccccccccchhHHHHHHHHHHHHHHHHHcCchhHHHHHHHhCCCcchhcCCccceeccc
Confidence 4678999999999842 2345677889999998 899999999999999999999999999
Q ss_pred CCcHHHHHHHHhCCCCccc-cccccceeEEEeee
Q 022540 144 QLVPEFEEVAFTTPLNKVA-RCKTKFGWHLLQVL 176 (295)
Q Consensus 144 ~~~~~~~~~~~~l~~G~vs-pv~~~~G~~ii~v~ 176 (295)
+|+++|.+++|+|++|++| ||++++||||+++.
T Consensus 143 ~l~~~f~~a~f~L~~GeiS~pv~t~~G~hIikv~ 176 (177)
T 1yw5_A 143 QMQPPFEEAAFNLHVGEVSNIIETNSGVHILQRT 176 (177)
T ss_dssp SSCHHHHHHHHTSCTTCBCCCEEETTEEEEEEEC
T ss_pred ccCHHHHHHHHcCCCCCcCCeEEECCEEEEEEEe
Confidence 9999999999999999999 99999999999875
No 33
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=99.83 E-value=1.4e-21 Score=141.56 Aligned_cols=79 Identities=28% Similarity=0.397 Sum_probs=68.9
Q ss_pred ceeecCcchhHHhhcCCCCccccCccccCCCCccccccCCCCCcEEEEeCCChhHHHHHHHHHHcCCCceEEccccHhhc
Q 022540 205 AQLIDVREPEEVALSSLPGFQVLPLRQFGSWGPDITVKFDPQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIHAY 284 (295)
Q Consensus 205 ~~iiDvR~~~e~~~ghIpgAinip~~~l~~~~~~~~~~~~~~~~ivv~C~~g~rs~~aa~~L~~~G~~~v~~l~GG~~~W 284 (295)
+.+||||++.||..||||||+|||+..+......+ ..+++++|||||++|.||..++..|++.||++|+++ ||+.+|
T Consensus 2 ~~liDvR~~~e~~~ghIpgA~~ip~~~l~~~~~~l--~~~~~~~ivv~C~~g~rs~~aa~~L~~~G~~~v~~l-GG~~~w 78 (85)
T 2jtq_A 2 EHWIDVRVPEQYQQEHVQGAINIPLKEVKERIATA--VPDKNDTVKVYCNAGRQSGQAKEILSEMGYTHVENA-GGLKDI 78 (85)
T ss_dssp EEEEECSCHHHHTTEEETTCEECCHHHHHHHHHHH--CCCTTSEEEEEESSSHHHHHHHHHHHHTTCSSEEEE-EETTTC
T ss_pred CEEEECCCHHHHHhCCCCCCEEcCHHHHHHHHHHh--CCCCCCcEEEEcCCCchHHHHHHHHHHcCCCCEEec-cCHHHH
Confidence 57999999999999999999999998875432211 127889999999999999999999999999999999 999999
Q ss_pred cc
Q 022540 285 AT 286 (295)
Q Consensus 285 ~~ 286 (295)
..
T Consensus 79 ~~ 80 (85)
T 2jtq_A 79 AM 80 (85)
T ss_dssp CS
T ss_pred hc
Confidence 64
No 34
>3g5j_A Putative ATP/GTP binding protein; N-terminal domain of ATP/GTP binding protein, PSI, MCSG, STR genomics, protein structure initiative; HET: PGE; 1.76A {Clostridium difficile}
Probab=99.81 E-value=4e-21 Score=150.77 Aligned_cols=97 Identities=22% Similarity=0.283 Sum_probs=76.7
Q ss_pred ccccchhhhhhccCCCccccceeecCcchhHHhhcCCCCccccCccccCCC-----------------------------
Q 022540 185 QDIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSW----------------------------- 235 (295)
Q Consensus 185 ~~is~~el~~~L~~~~~~~~~~iiDvR~~~e~~~ghIpgAinip~~~l~~~----------------------------- 235 (295)
..++++++.+ . +++.|||||++.||..||||||+|||+..+...
T Consensus 5 ~~i~~~el~~---~----~~~~iiDvR~~~e~~~ghIpgA~nip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (134)
T 3g5j_A 5 SVIKIEKALK---L----DKVIFVDVRTEGEYEEDHILNAINMPLFKNNEHNEVGTIYKMQGKHEAIQKGFDYVSYKLKD 77 (134)
T ss_dssp CEECHHHHTT---C----TTEEEEECSCHHHHHHCCCTTCEECCSSCHHHHHHHHHHHHHHCHHHHHHHHHHHHGGGHHH
T ss_pred cccCHHHHHh---c----CCcEEEEcCCHHHHhcCCCCCCEEcCccchhhhhcccceeeecChhHHHhcccccccccHHH
Confidence 3466666655 2 578999999999999999999999999643210
Q ss_pred CccccccCCCC-CcEEEEe-CCChhHHHHHHHHHHcCCCceEEccccHhhcccccC
Q 022540 236 GPDITVKFDPQ-KDTYVMC-HHGMRSLQVAQWLQTQGFRRVFNVSGGIHAYATKVD 289 (295)
Q Consensus 236 ~~~~~~~~~~~-~~ivv~C-~~g~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~~~ 289 (295)
....+..++++ ++||||| ++|.||..++..|+..|| +|++|+||+.+|.+...
T Consensus 78 ~~~~~~~~~~~~~~ivvyC~~~G~rs~~a~~~L~~~G~-~v~~l~GG~~~W~~~~~ 132 (134)
T 3g5j_A 78 IYLQAAELALNYDNIVIYCARGGMRSGSIVNLLSSLGV-NVYQLEGGYKAYRNFVL 132 (134)
T ss_dssp HHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHHHTTC-CCEEETTHHHHHHHHHT
T ss_pred HHHHHHHhccCCCeEEEEECCCChHHHHHHHHHHHcCC-ceEEEeCcHHHHHHHhh
Confidence 00112234677 9999999 589999999999999999 99999999999986543
No 35
>4f67_A UPF0176 protein LPG2838; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium; 1.79A {Legionella pneumophila subsp}
Probab=99.81 E-value=1.2e-20 Score=164.14 Aligned_cols=105 Identities=21% Similarity=0.368 Sum_probs=88.6
Q ss_pred cccccchhhhhhccCCCccccceeecCcchhHHhhcCCCCccccCccccCCCCccccc--cCCCCCcEEEEeCCChhHHH
Q 022540 184 LQDIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSWGPDITV--KFDPQKDTYVMCHHGMRSLQ 261 (295)
Q Consensus 184 ~~~is~~el~~~L~~~~~~~~~~iiDvR~~~e~~~ghIpgAinip~~~l~~~~~~~~~--~~~~~~~ivv~C~~g~rs~~ 261 (295)
...++++++.+++.+ ++.+|||||++.||..||||||+|+|+..+.+....+.. ..+++++||+||++|.||..
T Consensus 121 ~~~Is~~el~~ll~~----~~~vlIDVR~~~Ey~~GHIpGAiniP~~~~~~~~~~l~~~l~~~kdk~IVvyC~~G~RS~~ 196 (265)
T 4f67_A 121 GTYLSPEEWHQFIQD----PNVILLDTRNDYEYELGTFKNAINPDIENFREFPDYVQRNLIDKKDKKIAMFCTGGIRCEK 196 (265)
T ss_dssp TCEECHHHHHHHTTC----TTSEEEECSCHHHHHHEEETTCBCCCCSSGGGHHHHHHHHTGGGTTSCEEEECSSSHHHHH
T ss_pred CceECHHHHHHHhcC----CCeEEEEeCCchHhhcCcCCCCEeCCHHHHHhhHHHHHHhhhhCCCCeEEEEeCCChHHHH
Confidence 445888999999876 578999999999999999999999999887543222211 12688999999999999999
Q ss_pred HHHHHHHcCCCceEEccccHhhcccccCCCC
Q 022540 262 VAQWLQTQGFRRVFNVSGGIHAYATKVDPSI 292 (295)
Q Consensus 262 aa~~L~~~G~~~v~~l~GG~~~W~~~~~p~~ 292 (295)
++..|+..||++|++|+||+.+|.++..+..
T Consensus 197 Aa~~L~~~Gf~nV~~L~GGi~aW~~~~~~~~ 227 (265)
T 4f67_A 197 TTAYMKELGFEHVYQLHDGILNYLESIPESE 227 (265)
T ss_dssp HHHHHHHHTCSSEEEETTHHHHHHHHSCTTT
T ss_pred HHHHHHHcCCCCEEEecCHHHHHHHhcCccc
Confidence 9999999999999999999999998876643
No 36
>2fsx_A RV0390, COG0607: rhodanese-related sulfurtransferase; RV0390 BR SAD DATA with FBAR, structural genomics, PSI; 1.80A {Mycobacterium tuberculosis}
Probab=99.80 E-value=1.1e-20 Score=151.23 Aligned_cols=104 Identities=19% Similarity=0.252 Sum_probs=79.9
Q ss_pred cccchhhhhhccCCCccccceeecCcchhHHhh-cCC------CCccccCccccCC-----CCccccc-----cCCCCCc
Q 022540 186 DIQPDELHKKMQDPNFHKEAQLIDVREPEEVAL-SSL------PGFQVLPLRQFGS-----WGPDITV-----KFDPQKD 248 (295)
Q Consensus 186 ~is~~el~~~L~~~~~~~~~~iiDvR~~~e~~~-ghI------pgAinip~~~l~~-----~~~~~~~-----~~~~~~~ 248 (295)
.++++++.+++.+. ++.+|||||++.||.. ||| |||+|||+..+.. +...+.. .++++++
T Consensus 6 ~is~~el~~~l~~~---~~~~liDVR~~~e~~~~ghi~~~g~~pgAv~ip~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 82 (148)
T 2fsx_A 6 DITPLQAWEMLSDN---PRAVLVDVRCEAEWRFVGVPDLSSLGREVVYVEWATSDGTHNDNFLAELRDRIPADADQHERP 82 (148)
T ss_dssp EECHHHHHHHHHHC---TTCEEEECSCHHHHHHTCEECCGGGTCCCEECCSBCTTSCBCTTHHHHHHHHCC-------CC
T ss_pred cCCHHHHHHHHhcC---CCeEEEECCCHHHHHhcCCCccccCCCCcEEeeeeccccccCHHHHHHHHHHHhhccCCCCCE
Confidence 47788898888742 3678999999999997 999 9999999987211 0011111 1378899
Q ss_pred EEEEeCCChhHHHHHHHHHHcCCCceEEccccH------------hhcccccCCCC
Q 022540 249 TYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGI------------HAYATKVDPSI 292 (295)
Q Consensus 249 ivv~C~~g~rs~~aa~~L~~~G~~~v~~l~GG~------------~~W~~~~~p~~ 292 (295)
|||||++|.||..++..|+..||++|++|+||+ .+|...++|..
T Consensus 83 ivvyC~~G~rS~~aa~~L~~~G~~~v~~l~GG~~~w~~~~g~~~~~~W~~~glp~~ 138 (148)
T 2fsx_A 83 VIFLCRSGNRSIGAAEVATEAGITPAYNVLDGFEGHLDAEGHRGATGWRAVGLPWR 138 (148)
T ss_dssp EEEECSSSSTHHHHHHHHHHTTCCSEEEETTTTTCCCCTTSCCCSSSTTTTTCSEE
T ss_pred EEEEcCCChhHHHHHHHHHHcCCcceEEEcCChhhhhhhccccccccHHHcCCCCC
Confidence 999999999999999999999999999999999 56777776653
No 37
>1vee_A Proline-rich protein family; hypothetical protein, structural genomics, rhodanese domain, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} PDB: 2dcq_A
Probab=99.80 E-value=1.8e-20 Score=147.47 Aligned_cols=106 Identities=17% Similarity=0.230 Sum_probs=83.7
Q ss_pred cccccchhhhhhccCCCccccceeecCcchhHHhh-cCC------CCccccCccccCC--CCccccccC--CCCCcEEEE
Q 022540 184 LQDIQPDELHKKMQDPNFHKEAQLIDVREPEEVAL-SSL------PGFQVLPLRQFGS--WGPDITVKF--DPQKDTYVM 252 (295)
Q Consensus 184 ~~~is~~el~~~L~~~~~~~~~~iiDvR~~~e~~~-ghI------pgAinip~~~l~~--~~~~~~~~~--~~~~~ivv~ 252 (295)
...++++++.+++.+. ++.+|||||++.||.. +|+ |||+|||+..+.. +...+...+ +++++||||
T Consensus 4 ~~~is~~e~~~~l~~~---~~~~liDVR~~~E~~~~~~~~~~g~~~ga~~ip~~~~~~~~~~~~l~~~~~~~~~~~ivv~ 80 (134)
T 1vee_A 4 GSSGSAKNAYTKLGTD---DNAQLLDIRATADFRQVGSPNIKGLGKKAVSTVYNGEDKPGFLKKLSLKFKDPENTTLYIL 80 (134)
T ss_dssp SCBCCHHHHHHHHHHC---TTEEEEECSCHHHHHHTCEECCTTTSCCCEECCCCGGGHHHHHHHHHTTCSCGGGCEEEEE
T ss_pred CCccCHHHHHHHHHhC---CCeEEEEcCCHHHHhhcCCCcccccCCceEEeecccccChhHHHHHHHHhCCCCCCEEEEE
Confidence 3457888998888632 4678999999999986 333 7999999976421 101111112 678999999
Q ss_pred eCCChhHHHHHHHHHHcCCCceEEccccH---hhcccccCCCC
Q 022540 253 CHHGMRSLQVAQWLQTQGFRRVFNVSGGI---HAYATKVDPSI 292 (295)
Q Consensus 253 C~~g~rs~~aa~~L~~~G~~~v~~l~GG~---~~W~~~~~p~~ 292 (295)
|++|.||..++..|+.+||++|++|.||+ .+|...++|..
T Consensus 81 C~sG~RS~~aa~~L~~~G~~~v~~l~GG~~~~~~W~~~g~p~~ 123 (134)
T 1vee_A 81 DKFDGNSELVAELVALNGFKSAYAIKDGAEGPRGWLNSSLPWI 123 (134)
T ss_dssp CSSSTTHHHHHHHHHHHTCSEEEECTTTTTSTTSSGGGTCCEE
T ss_pred eCCCCcHHHHHHHHHHcCCcceEEecCCccCCcchhhcCCCCC
Confidence 99999999999999999999999999999 78999998865
No 38
>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}
Probab=99.78 E-value=1e-19 Score=162.35 Aligned_cols=104 Identities=18% Similarity=0.194 Sum_probs=87.9
Q ss_pred cccchhhhhhccCCCccccceeecCcchhHH-----------hhcCCCCccccCccccCCCCccc---------c--ccC
Q 022540 186 DIQPDELHKKMQDPNFHKEAQLIDVREPEEV-----------ALSSLPGFQVLPLRQFGSWGPDI---------T--VKF 243 (295)
Q Consensus 186 ~is~~el~~~L~~~~~~~~~~iiDvR~~~e~-----------~~ghIpgAinip~~~l~~~~~~~---------~--~~~ 243 (295)
.++.+++.+.+.+ ....|||||++.|| ..||||||+|||+..+......+ + ..+
T Consensus 176 ~i~~~e~~~~~~~----~~~~liDvR~~~ef~G~~~~p~~~~~~GhIpGAiniP~~~l~~~~~~~~~~~~l~~~~~~~~~ 251 (302)
T 3olh_A 176 IKTYEDIKENLES----RRFQVVDSRATGRFRGTEPEPRDGIEPGHIPGTVNIPFTDFLSQEGLEKSPEEIRHLFQEKKV 251 (302)
T ss_dssp EECHHHHHHHHHH----CCSEEEECSCHHHHHTSSCCSSTTCCCCCCTTCEECCGGGGBCSSSCBCCHHHHHHHHHHTTC
T ss_pred eecHHHHHHhhcC----CCcEEEecCCHHHccccccCCCcCCcCccCCCceecCHHHhcCCCCccCCHHHHHHHHHhcCC
Confidence 4677888888765 46789999999999 78999999999998875532211 0 136
Q ss_pred CCCCcEEEEeCCChhHHHHHHHHHHcCCCceEEccccHhhcccccCCCCC
Q 022540 244 DPQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIHAYATKVDPSIP 293 (295)
Q Consensus 244 ~~~~~ivv~C~~g~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~~~p~~p 293 (295)
+++++||+||++|.||..++..|+.+||++|++|+|||.+|...++|.+.
T Consensus 252 ~~~~~iv~yC~sG~rs~~a~~~L~~~G~~~v~~~~Gg~~~W~~~~~P~~~ 301 (302)
T 3olh_A 252 DLSKPLVATCGSGVTACHVALGAYLCGKPDVPIYDGSWVEWYMRARPEDV 301 (302)
T ss_dssp CTTSCEEEECSSSSTTHHHHHHHHTTTCCCCCEESSHHHHHHHHHCCCC-
T ss_pred CCCCCEEEECCChHHHHHHHHHHHHcCCCCeeEeCCcHHHHhhccCCCCC
Confidence 78999999999999999999999999999999999999999999999874
No 39
>1c25_A CDC25A; hydrolase, cell cycle phosphatase,dual specificity protein phosphatase, CDK2; 2.30A {Homo sapiens} SCOP: c.46.1.1
Probab=99.77 E-value=9.2e-20 Score=147.87 Aligned_cols=107 Identities=17% Similarity=0.216 Sum_probs=83.2
Q ss_pred cccccchhhhhhccCCCc--cccceeecCcchhHHhhcCCCCccccCccccCCC-CccccccC-CCCCcE--EEEeC-CC
Q 022540 184 LQDIQPDELHKKMQDPNF--HKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSW-GPDITVKF-DPQKDT--YVMCH-HG 256 (295)
Q Consensus 184 ~~~is~~el~~~L~~~~~--~~~~~iiDvR~~~e~~~ghIpgAinip~~~l~~~-~~~~~~~~-~~~~~i--vv~C~-~g 256 (295)
...++++++.+++.+... .++..|||||++.||..||||||+|||+..+... ... ...+ +++++| ||||. +|
T Consensus 22 ~~~is~~el~~~l~~~~~~~~~~~~liDvR~~~e~~~ghIpgAinip~~~~~~~~~~~-~~~~~~~~~~ivvv~yC~~sg 100 (161)
T 1c25_A 22 LKYISPEIMASVLNGKFANLIKEFVIIDCRYPYEYEGGHIKGAVNLHMEEEVEDFLLK-KPIVPTDGKRVIVVFHCEFSS 100 (161)
T ss_dssp SCEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTCEECCSHHHHHHHTTT-SCCCCCTTSEEEEEEECSSSS
T ss_pred cceeCHHHHHHHHhccccccCCCeEEEECCChHHccCCcccCcEeCChhHHHHHHHhh-hhhccCCCCCeEEEEEcCCCC
Confidence 456888999998875200 0257899999999999999999999999865321 111 1112 567886 67899 99
Q ss_pred hhHHHHHHHHHH----------cCCCceEEccccHhhcccccCCC
Q 022540 257 MRSLQVAQWLQT----------QGFRRVFNVSGGIHAYATKVDPS 291 (295)
Q Consensus 257 ~rs~~aa~~L~~----------~G~~~v~~l~GG~~~W~~~~~p~ 291 (295)
.||..++..|++ .||++|++|+||+.+|...+.|.
T Consensus 101 ~rs~~aa~~L~~~~~~~~~l~~~G~~~v~~l~GG~~~W~~~~~~~ 145 (161)
T 1c25_A 101 ERGPRMCRYVRERDRLGNEYPKLHYPELYVLKGGYKEFFMKCQSY 145 (161)
T ss_dssp SHHHHHHHHHHHHHHHTSSTTCCSSCCEEEETTHHHHHHHHHGGG
T ss_pred cchHHHHHHHHHHHHhhhhccccCCceEEEEcCCHHHHHHHcccc
Confidence 999999999986 49999999999999999887654
No 40
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=99.77 E-value=5.5e-19 Score=155.11 Aligned_cols=103 Identities=17% Similarity=0.201 Sum_probs=86.8
Q ss_pred cccchhhhhhccCCCccccceeecCcchhHHh--------hcCCCCccccCccccCCCCc---------cccc--cCCCC
Q 022540 186 DIQPDELHKKMQDPNFHKEAQLIDVREPEEVA--------LSSLPGFQVLPLRQFGSWGP---------DITV--KFDPQ 246 (295)
Q Consensus 186 ~is~~el~~~L~~~~~~~~~~iiDvR~~~e~~--------~ghIpgAinip~~~l~~~~~---------~~~~--~~~~~ 246 (295)
.++.+++.+.+.+ .+..|||||++.||. .||||||+|||+..+..... ..+. .++++
T Consensus 148 ~i~~~~l~~~l~~----~~~~liDvR~~~e~~g~~~~~~~~ghIpgA~~ip~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 223 (271)
T 1e0c_A 148 TASRDYLLGRLGA----ADLAIWDARSPQEYRGEKVLAAKGGHIPGAVNFEWTAAMDPSRALRIRTDIAGRLEELGITPD 223 (271)
T ss_dssp BCCHHHHHHHTTC----TTEEEEECSCHHHHTTSSCCSSSCSBCTTCEECCGGGGEEGGGTTEECTTHHHHHHHTTCCTT
T ss_pred cccHHHHHHHhcC----CCcEEEEcCChhhcCCccCCCCcCCcCCCceeccHHHhCCCCCCCCCHHHHHHHHHHcCCCCC
Confidence 4778889888876 467899999999999 89999999999987743210 0122 46789
Q ss_pred CcEEEEeCCChhHHHHHHHHHHcCCCceEEccccHhhcccc-cCCCC
Q 022540 247 KDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIHAYATK-VDPSI 292 (295)
Q Consensus 247 ~~ivv~C~~g~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~-~~p~~ 292 (295)
++|||||++|.||..++..|+.+||++|++|+||+.+|... +.|..
T Consensus 224 ~~ivvyC~~G~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~~~~pv~ 270 (271)
T 1e0c_A 224 KEIVTHCQTHHRSGLTYLIAKALGYPRVKGYAGSWGEWGNHPDTPVE 270 (271)
T ss_dssp SEEEEECSSSSHHHHHHHHHHHTTCSCEEECSSHHHHHTTCTTCCCB
T ss_pred CCEEEECCchHHHHHHHHHHHHcCCCCceeeCCcHHHHhcCCCCCCc
Confidence 99999999999999999999999999999999999999987 76653
No 41
>3rfw_A Cell-binding factor 2; SURA-like, chaperone; 2.20A {Campylobacter jejuni}
Probab=99.76 E-value=1.4e-19 Score=157.38 Aligned_cols=112 Identities=26% Similarity=0.486 Sum_probs=93.8
Q ss_pred ccChHhh-hccccCCCCCCCCCCCccEEEeeEEeccchHHHHHHHHHHhc--CC----CcHHHHHHHhCCCC-CccCCCc
Q 022540 65 SFTSPKA-ASFSSGTEGSSPGGGDREILVQHLLVKEDDLNLLSELQRRVS--QG----EDLSDLAVEHSICP-SKGEGGM 136 (295)
Q Consensus 65 ~~~~~e~-~~~~~~~~~~~~~~~~~~~~~~hIl~~~~~~~~a~~~~~~i~--~g----~~F~~~a~~~S~~~-~~~~gG~ 136 (295)
.|++.|. ++|..+.. .+..+++++++||+++.++. |++++++|+ +| ++|+++|++||.|+ ++.+||+
T Consensus 90 ~vtd~ei~~~Y~~~~~---~f~~~~~~~~~~I~~~~~~~--A~~~~~~l~~~~g~~~~~~F~~lA~~~S~~~~~~~~gGd 164 (252)
T 3rfw_A 90 KIDAAKVKAFYDQNKD---KYVKPARVQAKHILVATEKE--AKDIINELKGLKGKELDAKFSELAKEKSIDPGSKNQGGE 164 (252)
T ss_dssp CCCHHHHHHHHHHHGG---GSEECCEEEEEEEEESSHHH--HHHHHHHHTTCCHHHHHHHHHHHHHHHCCCTTTGGGTTE
T ss_pred CCCHHHHHHHHHHhHH---hccccceEEEEEEEeCCHHH--HHHHHHHHHhhcCCCccccHHHHHHHhCCCCchhhcCCc
Confidence 4555544 44444432 23567899999999998765 999999999 55 49999999999999 5667999
Q ss_pred cccccCCCCcHHHHHHHHhCCCCccc--cccccceeEEEeeehhhhh
Q 022540 137 LGWVRKGQLVPEFEEVAFTTPLNKVA--RCKTKFGWHLLQVLSEREA 181 (295)
Q Consensus 137 lg~~~~~~~~~~~~~~~~~l~~G~vs--pv~~~~G~~ii~v~~~~~~ 181 (295)
+||+..++++|+|.+++++|++|++| |+++++|||++++.+.++.
T Consensus 165 lg~~~~~~l~~~f~~a~~~l~~G~is~~pv~t~~G~hii~v~~~~~~ 211 (252)
T 3rfw_A 165 LGWFDQSTMVKPFTDAAFALKNGTITTTPVKTNFGYHVILKENSQAK 211 (252)
T ss_dssp EEEECSSSSCHHHHHHHHHSCTTEECSSCEEETTEEEEEEEEEEECC
T ss_pred ccccccccccHHHHHHHHcCCCCCccCceEEECCEEEEEEEEEecCC
Confidence 99999999999999999999999998 7999999999999987754
No 42
>2j6p_A SB(V)-AS(V) reductase; arsenate reductase, antimonate reductase, CDC25 phosphatase, rhodanese, C-MYC epitope, oxidoreductase; HET: EPE; 2.15A {Leishmania major}
Probab=99.76 E-value=1.6e-19 Score=145.07 Aligned_cols=107 Identities=18% Similarity=0.229 Sum_probs=79.2
Q ss_pred ccccchhhhhhccCCCccccceeecCcchhHHhhcCCCCccccCccccCC-CCccccccCC-CCC-cEEEEe-CCChhHH
Q 022540 185 QDIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGS-WGPDITVKFD-PQK-DTYVMC-HHGMRSL 260 (295)
Q Consensus 185 ~~is~~el~~~L~~~~~~~~~~iiDvR~~~e~~~ghIpgAinip~~~l~~-~~~~~~~~~~-~~~-~ivv~C-~~g~rs~ 260 (295)
..++++++.+++.+....++.+|||||++ ||..||||||+|||+..+.. ..+.+...+. +++ .||+|| .+|.||.
T Consensus 5 ~~Is~~el~~~l~~~~~~~~~~lIDvR~~-ey~~gHIpGAinip~~~l~~~~~~~l~~~l~~~~~~~vV~yC~~sg~rs~ 83 (152)
T 2j6p_A 5 TYIKPEELVELLDNPDSLVKAAVIDCRDS-DRDCGFIVNSINMPTISCTEEMYEKLAKTLFEEKKELAVFHCAQSLVRAP 83 (152)
T ss_dssp EEECHHHHHHHHHSHHHHHTEEEEECCST-TGGGCBCTTCEECCTTTCCHHHHHHHHHHHHHTTCCEEEEECSSSSSHHH
T ss_pred CccCHHHHHHHHhCCCCCCCEEEEEcCcH-HhCcCcCCCcEECChhHhhHHHHHHHHHHhcccCCCEEEEEcCCCCCccH
Confidence 45778888888865100015789999999 99999999999999987643 1112211111 344 577779 7999998
Q ss_pred HHH----HHHHHcCC--CceEEccccHhhcccccCCCC
Q 022540 261 QVA----QWLQTQGF--RRVFNVSGGIHAYATKVDPSI 292 (295)
Q Consensus 261 ~aa----~~L~~~G~--~~v~~l~GG~~~W~~~~~p~~ 292 (295)
.++ ..|++.|| .+|++|+||+.+|...+.+..
T Consensus 84 ~aa~~~~~~L~~~G~~~~~v~~L~GG~~~W~~~g~~~~ 121 (152)
T 2j6p_A 84 KGANRFALAQKKLGYVLPAVYVLRGGWEAFYHMYGDVR 121 (152)
T ss_dssp HHHHHHHHHHHHHTCCCSEEEEETTHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHcCCCCCCEEEEcCcHHHHHHHcCCCC
Confidence 888 77888997 589999999999998887654
No 43
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=99.76 E-value=3e-19 Score=157.59 Aligned_cols=105 Identities=19% Similarity=0.253 Sum_probs=80.3
Q ss_pred ccccchhhhhhccCCCccccceeecCcchhHH-----------hhcCCCCccccCccccCCCC-----cccc-----ccC
Q 022540 185 QDIQPDELHKKMQDPNFHKEAQLIDVREPEEV-----------ALSSLPGFQVLPLRQFGSWG-----PDIT-----VKF 243 (295)
Q Consensus 185 ~~is~~el~~~L~~~~~~~~~~iiDvR~~~e~-----------~~ghIpgAinip~~~l~~~~-----~~~~-----~~~ 243 (295)
..++.+++.+.+.+ .+..|||||++.|| ..||||||+|||+..+.... ..+. ..+
T Consensus 152 ~~i~~~e~~~~~~~----~~~~liDvR~~~e~~G~~~~~~~~~~~ghIpgA~nip~~~~~~~~~~~~~~~l~~~~~~~~~ 227 (280)
T 1urh_A 152 AVVKVTDVLLASHE----NTAQIIDARPAARFNAEVDEPRPGLRRGHIPGALNVPWTELVREGELKTTDELDAIFFGRGV 227 (280)
T ss_dssp GBCCHHHHHHHHHH----TCSEEEECSCHHHHSSCCCC----CCSSSCTTCEECCGGGGBSSSSBCCHHHHHHHHHTTTC
T ss_pred cEEcHHHHHHHhcC----CCcEEEeCCchhhcccccCCCCCCCcCccCCCceEeeHHHhhcCCccCCHHHHHHHHHHcCC
Confidence 35788899888875 45789999999999 68999999999998876510 0111 135
Q ss_pred CCCCcEEEEeCCChhHHHHHHHHHHcCCCceEEccccHhhcccc-cCCCCC
Q 022540 244 DPQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIHAYATK-VDPSIP 293 (295)
Q Consensus 244 ~~~~~ivv~C~~g~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~-~~p~~p 293 (295)
+++++|||||++|.||..++..|+.+||++|++|+|||.+|... +.|...
T Consensus 228 ~~~~~ivv~C~~G~rs~~a~~~L~~~G~~~v~~~~GG~~~W~~~~~~Pv~~ 278 (280)
T 1urh_A 228 SYDKPIIVSCGSGVTAAVVLLALATLDVPNVKLYDGAWSEWGARADLPVEP 278 (280)
T ss_dssp CSSSCEEEECCSSSTHHHHHHHHHHTTCSSCEEECCSCCC-----------
T ss_pred CCCCCEEEECChHHHHHHHHHHHHHcCCCCceeeCChHHHHhcCCCCCcee
Confidence 78999999999999999999999999999999999999999874 777653
No 44
>1qb0_A Protein (M-phase inducer phosphatase 2 (CDC25B)); hydrolase, cell cycle phosphatase, dual specificity protein phosphatase; 1.91A {Homo sapiens} SCOP: c.46.1.1 PDB: 1cwr_A 1cws_A 2uzq_A
Probab=99.76 E-value=2.7e-19 Score=151.53 Aligned_cols=108 Identities=14% Similarity=0.182 Sum_probs=84.3
Q ss_pred hcccccchhhhhhccCCC--ccccceeecCcchhHHhhcCCCCccccCccccCCC-CccccccCC--CCCcE--EEEeC-
Q 022540 183 LLQDIQPDELHKKMQDPN--FHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSW-GPDITVKFD--PQKDT--YVMCH- 254 (295)
Q Consensus 183 ~~~~is~~el~~~L~~~~--~~~~~~iiDvR~~~e~~~ghIpgAinip~~~l~~~-~~~~~~~~~--~~~~i--vv~C~- 254 (295)
....++++++.+++.+.. ...+++|||||++.||..||||||+|||+..+... ... ...++ ++++| ||||.
T Consensus 42 ~~~~Is~~el~~~l~~~~~~~~~~~~lIDvR~~~Ey~~gHIpGAinip~~~l~~~~~~~-~~~l~~~~d~~ivvVvyC~~ 120 (211)
T 1qb0_A 42 DLKYISPETMVALLTGKFSNIVDKFVIVDCRYPYEYEGGHIKTAVNLPLERDAESFLLK-SPIAPCSLDKRVILIFHCEF 120 (211)
T ss_dssp TSCEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTCEECCSHHHHHHHHHT-TTCCCSSTTSEEEEEEECSS
T ss_pred CCCeeCHHHHHHHHhcccccCCCCEEEEECCCHHHHccCcCCCCEECCchHHHHHhhhh-hhhccccCCCCeEEEEECCC
Confidence 345688899999887520 00257899999999999999999999999765321 110 11233 67887 78899
Q ss_pred CChhHHHHHHHHHH----------cCCCceEEccccHhhcccccCCC
Q 022540 255 HGMRSLQVAQWLQT----------QGFRRVFNVSGGIHAYATKVDPS 291 (295)
Q Consensus 255 ~g~rs~~aa~~L~~----------~G~~~v~~l~GG~~~W~~~~~p~ 291 (295)
+|.||..++..|+. +||++|++|+||+.+|...+.|.
T Consensus 121 sG~rs~~aa~~L~~~~~~~~~l~~~G~~~V~~L~GG~~~W~~~g~~~ 167 (211)
T 1qb0_A 121 SSERGPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQHPNF 167 (211)
T ss_dssp SSSHHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGGG
T ss_pred CCccHHHHHHHHHhhhhhhhhhhhcCCCeEEEECCHHHHHHHHCccc
Confidence 99999999999986 69999999999999999887754
No 45
>2a2k_A M-phase inducer phosphatase 2; dual specificity, substrate trapping, active site mutant, hydrolase; 1.52A {Homo sapiens} PDB: 2ifv_A 1ymd_A 1ym9_A 1ymk_A 1yml_A 1ys0_A 1cwt_A 2ifd_A
Probab=99.76 E-value=2.7e-19 Score=147.08 Aligned_cols=108 Identities=13% Similarity=0.156 Sum_probs=81.0
Q ss_pred hcccccchhhhhhccCCC--ccccceeecCcchhHHhhcCCCCccccCccccCCC-CccccccC--CCCCcEEE--EeC-
Q 022540 183 LLQDIQPDELHKKMQDPN--FHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSW-GPDITVKF--DPQKDTYV--MCH- 254 (295)
Q Consensus 183 ~~~~is~~el~~~L~~~~--~~~~~~iiDvR~~~e~~~ghIpgAinip~~~l~~~-~~~~~~~~--~~~~~ivv--~C~- 254 (295)
....++++++.+++.+.. ...+..|||||++.||..||||||+|||+..+... ... ...+ +++++|+| ||+
T Consensus 22 ~~~~is~~el~~~l~~~~~~~~~~~~liDvR~~~ey~~ghIpgAinip~~~l~~~~~~~-~~~~~~~~~~~ivvv~yC~~ 100 (175)
T 2a2k_A 22 DLKYISPETMVALLTGKFSNIVDKFVIVDCRYPYEYEGGHIKTAVNLPLERDAESFLLK-SPIAPCSLDKRVILIFHSEF 100 (175)
T ss_dssp TSCEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTCEECCSHHHHHHHHHS-SCCCC----CEEEEEEECSS
T ss_pred CCceeCHHHHHHHHhcccccCCCCEEEEECCCHHHHcCCcCCCcEECChhHHHHHhhhh-hhhccccCCCCeEEEEECCC
Confidence 345688899999887520 00257899999999999999999999999765321 100 0112 37888754 699
Q ss_pred CChhHHHHHHHHHH----------cCCCceEEccccHhhcccccCCC
Q 022540 255 HGMRSLQVAQWLQT----------QGFRRVFNVSGGIHAYATKVDPS 291 (295)
Q Consensus 255 ~g~rs~~aa~~L~~----------~G~~~v~~l~GG~~~W~~~~~p~ 291 (295)
+|.||..++..|++ +||++|++|+||+.+|...+.|.
T Consensus 101 ~g~rs~~aa~~L~~~~~~~~~l~~~G~~~V~~L~GG~~~W~~~~~~~ 147 (175)
T 2a2k_A 101 SSERGPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQHPNF 147 (175)
T ss_dssp SSSHHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGGG
T ss_pred CCCccHHHHHHHHHhhhhhhhhhhcCCceEEEEcCCHHHHHHHCccc
Confidence 99999999999985 49999999999999999887664
No 46
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=99.75 E-value=1.4e-18 Score=152.61 Aligned_cols=103 Identities=19% Similarity=0.283 Sum_probs=87.0
Q ss_pred cccchhhhhhccCCCccccceeecCcchhHHhhcCCCCccccCccccCCCCc-------------ccccc--CCCCCcEE
Q 022540 186 DIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSWGP-------------DITVK--FDPQKDTY 250 (295)
Q Consensus 186 ~is~~el~~~L~~~~~~~~~~iiDvR~~~e~~~ghIpgAinip~~~l~~~~~-------------~~~~~--~~~~~~iv 250 (295)
.++++++.+++.+ ++++|||||++.||..||||||+|||+..+..... ..+.. ++++++||
T Consensus 10 ~is~~~l~~~l~~----~~~~iiDvR~~~ey~~ghIpgA~~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~vv 85 (271)
T 1e0c_A 10 VIEPADLQARLSA----PELILVDLTSAARYAEGHIPGARFVDPKRTQLGQPPAPGLQPPREQLESLFGELGHRPEAVYV 85 (271)
T ss_dssp EECHHHHHTTTTC----TTEEEEECSCHHHHHHCBSTTCEECCGGGGSCCCTTCTTSCCCHHHHHHHHHHHTCCTTCEEE
T ss_pred eeeHHHHHHhccC----CCeEEEEcCCcchhhhCcCCCCEECCHHHhccCCCCCCCCCCCHHHHHHHHHHcCCCCCCeEE
Confidence 5788899988875 46799999999999999999999999987754310 01222 57899999
Q ss_pred EEeCCCh-hHHHHHHHHHHcCCCceEEccccHhhcccccCCCC
Q 022540 251 VMCHHGM-RSLQVAQWLQTQGFRRVFNVSGGIHAYATKVDPSI 292 (295)
Q Consensus 251 v~C~~g~-rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~~~p~~ 292 (295)
|||.+|. +|..++..|+..||++|++|+||+.+|...+.|..
T Consensus 86 vyc~~g~~~s~~a~~~L~~~G~~~v~~L~GG~~~w~~~g~p~~ 128 (271)
T 1e0c_A 86 VYDDEGGGWAGRFIWLLDVIGQQRYHYLNGGLTAWLAEDRPLS 128 (271)
T ss_dssp EECSSSSHHHHHHHHHHHHTTCCCEEEETTHHHHHHHTTCCCB
T ss_pred EEcCCCCccHHHHHHHHHHcCCCCeEEecCCHHHHHHcCCCcc
Confidence 9999988 99999999999999999999999999998887754
No 47
>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A
Probab=99.74 E-value=9.7e-19 Score=155.58 Aligned_cols=103 Identities=17% Similarity=0.155 Sum_probs=85.4
Q ss_pred ccccchhhhhhccCCCccccceeecCcchhHH------------hhcCCCCccccCccccCCCCcc------c---cc--
Q 022540 185 QDIQPDELHKKMQDPNFHKEAQLIDVREPEEV------------ALSSLPGFQVLPLRQFGSWGPD------I---TV-- 241 (295)
Q Consensus 185 ~~is~~el~~~L~~~~~~~~~~iiDvR~~~e~------------~~ghIpgAinip~~~l~~~~~~------~---~~-- 241 (295)
..++.+++.+.+.+ .+.+|||||++.|| ..||||||+|||+..+...... + +.
T Consensus 160 ~~i~~~e~~~~~~~----~~~~liDvR~~~e~~G~~~~~~~~~~~~ghIpgA~nip~~~l~~~~~~~~~~~~l~~~~~~~ 235 (296)
T 1rhs_A 160 LLKTYEQVLENLES----KRFQLVDSRAQGRYLGTQPEPDAVGLDSGHIRGSVNMPFMNFLTEDGFEKSPEELRAMFEAK 235 (296)
T ss_dssp GEECHHHHHHHHHH----CCSEEEECSCHHHHHTSSCCSSSSSCCCCEETTCEECCGGGGBCTTSCBCCHHHHHHHHHHT
T ss_pred eEEcHHHHHHHhcC----CCceEEeCCchhhcccccCCcccCCCcCccCCCCEeecHHHhcCCCCcCCCHHHHHHHHHHc
Confidence 35778888888865 45789999999999 7899999999999887542111 1 11
Q ss_pred cCCCCCcEEEEeCCChhHHHHHHHHHHcCCCceEEccccHhhccc-ccCCC
Q 022540 242 KFDPQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIHAYAT-KVDPS 291 (295)
Q Consensus 242 ~~~~~~~ivv~C~~g~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~-~~~p~ 291 (295)
.++++++|||||++|.||..++..|+.+||++|++|+|||.+|.. .+.|.
T Consensus 236 ~~~~~~~ivv~C~sG~rs~~a~~~L~~~G~~~v~~~~GG~~~W~~~~~~pv 286 (296)
T 1rhs_A 236 KVDLTKPLIATCRKGVTACHIALAAYLCGKPDVAIYDGSWFEWFHRAPPET 286 (296)
T ss_dssp TCCTTSCEEEECSSSSTHHHHHHHHHHTTCCCCEEESSHHHHHHHHSCGGG
T ss_pred CCCCCCCEEEECCcHHHHHHHHHHHHHcCCCCceeeCCcHHHHhcCCCCCc
Confidence 357899999999999999999999999999999999999999987 45554
No 48
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=99.74 E-value=3e-18 Score=151.15 Aligned_cols=103 Identities=18% Similarity=0.205 Sum_probs=86.2
Q ss_pred cccchhhhhhccCCCccccceeecCc----------chhHHhhcCCCCccccCccccCCCCc-------------ccccc
Q 022540 186 DIQPDELHKKMQDPNFHKEAQLIDVR----------EPEEVALSSLPGFQVLPLRQFGSWGP-------------DITVK 242 (295)
Q Consensus 186 ~is~~el~~~L~~~~~~~~~~iiDvR----------~~~e~~~ghIpgAinip~~~l~~~~~-------------~~~~~ 242 (295)
.++++++.+++.+ ++++|||+| ++.||..||||||+|||+..+..... ..+..
T Consensus 5 ~is~~~l~~~l~~----~~~~iiDvR~~~~~~~~~~~~~e~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~ 80 (280)
T 1urh_A 5 FVGADWLAEHIDD----PEIQIIDARMASPGQEDRNVAQEYLNGHIPGAVFFDIEALSDHTSPLPHMLPRPETFAVAMRE 80 (280)
T ss_dssp EECHHHHHTTTTC----TTEEEEECCCCCSSCTTCCHHHHHHHSBCTTCEECCGGGGSCSSSSSSSCCCCHHHHHHHHHH
T ss_pred eeeHHHHHHhcCC----CCeEEEEeeccCCcccccchhhhhhhCcCCCCEECCHHHhcCCCCCCCCCCCCHHHHHHHHHH
Confidence 4778899988875 467999999 78899999999999999987654211 11122
Q ss_pred --CCCCCcEEEEeCCChh-HHHHHHHHHHcCCCceEEccccHhhcccccCCCC
Q 022540 243 --FDPQKDTYVMCHHGMR-SLQVAQWLQTQGFRRVFNVSGGIHAYATKVDPSI 292 (295)
Q Consensus 243 --~~~~~~ivv~C~~g~r-s~~aa~~L~~~G~~~v~~l~GG~~~W~~~~~p~~ 292 (295)
++++++|||||.+|.+ |..++..|+.+||++|++|+||+.+|...+.|..
T Consensus 81 ~gi~~~~~ivvyc~~g~~~a~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~ 133 (280)
T 1urh_A 81 LGVNQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILGGGLAGWQRDDLLLE 133 (280)
T ss_dssp TTCCTTSEEEEECSSSCSSHHHHHHHHHHTTCSCEEEETTHHHHHHHTTCCCB
T ss_pred cCCCCCCeEEEECCCCCccHHHHHHHHHHcCCCCEEEecCCHHHHHHCCCccc
Confidence 4789999999999998 8999999999999999999999999998887754
No 49
>2vsw_A Dual specificity protein phosphatase 16; hydrolase, dual specificity phosphatase, nucleus, cytoplasm, rhodanese domain, CAsp8; 2.20A {Homo sapiens} PDB: 3tg3_A
Probab=99.74 E-value=5.7e-19 Score=141.93 Aligned_cols=102 Identities=15% Similarity=0.163 Sum_probs=78.2
Q ss_pred ccccchhhhhhccCCCccccceeecCcchhHHhhcCCCCccccCccccC-CCCc-------cc-----cc--cCCCCCcE
Q 022540 185 QDIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFG-SWGP-------DI-----TV--KFDPQKDT 249 (295)
Q Consensus 185 ~~is~~el~~~L~~~~~~~~~~iiDvR~~~e~~~ghIpgAinip~~~l~-~~~~-------~~-----~~--~~~~~~~i 249 (295)
..++++++.+++++.. ++.+|||||++.||..||||||+|||+..+. .... .+ .. .++++++|
T Consensus 4 ~~Is~~~l~~~l~~~~--~~~~iiDvR~~~ey~~gHIpgAinip~~~l~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~i 81 (153)
T 2vsw_A 4 TQIVTERLVALLESGT--EKVLLIDSRPFVEYNTSHILEAININCSKLMKRRLQQDKVLITELIQHSAKHKVDIDCSQKV 81 (153)
T ss_dssp EEECHHHHHHHHTSTT--CCEEEEECSCHHHHHHCEETTCEECCCCHHHHHHHHTTSSCHHHHHHHSCSSCCCCCTTSEE
T ss_pred ccccHHHHHHHHhcCC--CCEEEEECCCHHHhccCccCCCeeeChHHHHHhhhhcCCcCHHHhcCchhhhhhccCCCCeE
Confidence 3477889998887421 4679999999999999999999999998762 1000 11 01 24678999
Q ss_pred EEEeCCChhHHHH------HHHHHH--cCCCceEEccccHhhccccc
Q 022540 250 YVMCHHGMRSLQV------AQWLQT--QGFRRVFNVSGGIHAYATKV 288 (295)
Q Consensus 250 vv~C~~g~rs~~a------a~~L~~--~G~~~v~~l~GG~~~W~~~~ 288 (295)
||||++|.++..+ +..|+. .||++|++|+||+.+|....
T Consensus 82 Vvyc~~g~~s~~a~~~~~~~~~L~~l~~G~~~v~~L~GG~~~W~~~~ 128 (153)
T 2vsw_A 82 VVYDQSSQDVASLSSDCFLTVLLGKLEKSFNSVHLLAGGFAEFSRCF 128 (153)
T ss_dssp EEECSSCCCGGGSCTTSHHHHHHHHHHHHCSCEEEETTHHHHHHHHC
T ss_pred EEEeCCCCcccccccchHHHHHHHHHHhCCCcEEEEeChHHHHHHhC
Confidence 9999999988765 466774 49999999999999998753
No 50
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.74 E-value=1.7e-18 Score=163.64 Aligned_cols=101 Identities=28% Similarity=0.408 Sum_probs=90.1
Q ss_pred cccccchhhhhhccCCCccccceeecCcchhHHhhcCCCCccccCccccCCCCccccccCCCCCcEEEEeCCChhHHHHH
Q 022540 184 LQDIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSWGPDITVKFDPQKDTYVMCHHGMRSLQVA 263 (295)
Q Consensus 184 ~~~is~~el~~~L~~~~~~~~~~iiDvR~~~e~~~ghIpgAinip~~~l~~~~~~~~~~~~~~~~ivv~C~~g~rs~~aa 263 (295)
...++.+++.+.+.+ .+..|||+|++.||..||||||+|+|+..+... +..++++++||+||++|.||..++
T Consensus 373 ~~~i~~~~l~~~~~~----~~~~lvDvR~~~e~~~ghIpgA~~ip~~~l~~~----~~~l~~~~~vvv~C~~G~ra~~a~ 444 (474)
T 3tp9_A 373 YANVSPDEVRGALAQ----QGLWLLDVRNVDEWAGGHLPQAHHIPLSKLAAH----IHDVPRDGSVCVYCRTGGRSAIAA 444 (474)
T ss_dssp CEEECHHHHHHTTTT----TCCEEEECSCHHHHHHCBCTTCEECCHHHHTTT----GGGSCSSSCEEEECSSSHHHHHHH
T ss_pred ccccCHHHHHHHhcC----CCcEEEECCCHHHHhcCcCCCCEECCHHHHHHH----HhcCCCCCEEEEECCCCHHHHHHH
Confidence 345778888888875 467899999999999999999999999988654 345789999999999999999999
Q ss_pred HHHHHcCCCceEEccccHhhcccccCCCC
Q 022540 264 QWLQTQGFRRVFNVSGGIHAYATKVDPSI 292 (295)
Q Consensus 264 ~~L~~~G~~~v~~l~GG~~~W~~~~~p~~ 292 (295)
..|+.+||++|++|+|||.+|...+.|..
T Consensus 445 ~~L~~~G~~~v~~~~Gg~~~W~~~g~p~~ 473 (474)
T 3tp9_A 445 SLLRAHGVGDVRNMVGGYEAWRGKGFPVE 473 (474)
T ss_dssp HHHHHHTCSSEEEETTHHHHHHHTTCCCB
T ss_pred HHHHHcCCCCEEEecChHHHHHhCCCCCC
Confidence 99999999999999999999999988864
No 51
>3op3_A M-phase inducer phosphatase 3; structural genomics, structural genomics consortium, SGC, Al alpha sandwich, kinase, cytosol, hydrolase; 2.63A {Homo sapiens}
Probab=99.74 E-value=9.5e-19 Score=148.14 Aligned_cols=105 Identities=17% Similarity=0.257 Sum_probs=78.5
Q ss_pred cccccchhhhhhccCCC--ccccceeecCcchhHHhhcCCCCccccCccc-cCCCC-ccccccCCCCC--cEEEEeC-CC
Q 022540 184 LQDIQPDELHKKMQDPN--FHKEAQLIDVREPEEVALSSLPGFQVLPLRQ-FGSWG-PDITVKFDPQK--DTYVMCH-HG 256 (295)
Q Consensus 184 ~~~is~~el~~~L~~~~--~~~~~~iiDvR~~~e~~~ghIpgAinip~~~-l~~~~-~~~~~~~~~~~--~ivv~C~-~g 256 (295)
...++++++.+++.+.. ..++++|||||++.||..||||||+|||+.. +.... .......++++ +|||||. +|
T Consensus 56 ~~~Is~~eL~~~l~~~~~~~~~~~~lIDVR~~~Ey~~GHIpGAinIP~~~~l~~~l~~~~~~~~~~~k~~~VVvyC~~SG 135 (216)
T 3op3_A 56 LKYVNPETVAALLSGKFQGLIEKFYVIDCRYPYEYLGGHIQGALNLYSQEELFNFFLKKPIVPLDTQKRIIIVFHCEFSS 135 (216)
T ss_dssp SEEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTSEETTCEECCSHHHHHHHHTSSCCCCSSTTSEEEEEEECCC--
T ss_pred CCEeCHHHHHHHHhCCCccccCCEEEEEeCcHHHHhcCCccCCEECChHHHHHHHHhhccccccccCCCCEEEEEeCCCC
Confidence 55688999999997631 0015789999999999999999999999975 32110 00011123344 4999999 99
Q ss_pred hhHHHHHHHHHHc----------CCCceEEccccHhhccccc
Q 022540 257 MRSLQVAQWLQTQ----------GFRRVFNVSGGIHAYATKV 288 (295)
Q Consensus 257 ~rs~~aa~~L~~~----------G~~~v~~l~GG~~~W~~~~ 288 (295)
.||..++..|+.. ||++|++|+||+.+|..+.
T Consensus 136 ~Rs~~aa~~L~~~~~~~~~y~~lGf~~V~~L~GG~~aW~~~~ 177 (216)
T 3op3_A 136 ERGPRMCRCLREEDRSLNQYPALYYPELYILKGGYRDFFPEY 177 (216)
T ss_dssp CCHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTC
T ss_pred hHHHHHHHHHHHcCcccccccccCCCcEEEECCcHHHHHHhC
Confidence 9999999999886 8999999999999998753
No 52
>2ouc_A Dual specificity protein phosphatase 10; rhodanese fold, hydrolase; 2.20A {Homo sapiens}
Probab=99.73 E-value=5.4e-19 Score=139.83 Aligned_cols=100 Identities=20% Similarity=0.209 Sum_probs=72.9
Q ss_pred ccchhhhh--------hccCCCccccceeecCcchhHHhhcCCCCccccCccccCCC-C---ccc--cccC------C--
Q 022540 187 IQPDELHK--------KMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSW-G---PDI--TVKF------D-- 244 (295)
Q Consensus 187 is~~el~~--------~L~~~~~~~~~~iiDvR~~~e~~~ghIpgAinip~~~l~~~-~---~~~--~~~~------~-- 244 (295)
++++++.+ .+.+ ++.+|||+|++.||..||||||+|||+..+... . ... ...+ .
T Consensus 3 Is~~~l~~~l~~~~~~~l~~----~~~~iiDvR~~~e~~~ghIpgA~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (142)
T 2ouc_A 3 IYPNDLAKKMTKCSKSHLPS----QGPVIIDCRPFMEYNKSHIQGAVHINCADKISRRRLQQGKITVLDLISCREGKDSF 78 (142)
T ss_dssp ECHHHHHHHHHC--------------CEEEECSCHHHHHHEEETTCEECCCSSHHHHHHHHTTSSCHHHHHHTTSCTTHH
T ss_pred cCHHHHHHHHHhcccccCCC----CCCEEEEeCCHHHhhhhhccCccccCccHHHHHHHhhcCCcchhhhCCChhhhHHH
Confidence 56677777 4443 467899999999999999999999999764210 0 000 0000 0
Q ss_pred ---CCCcEEEEeCCChhH---------HHHHHHHHHcCCCceEEccccHhhcccccCCC
Q 022540 245 ---PQKDTYVMCHHGMRS---------LQVAQWLQTQGFRRVFNVSGGIHAYATKVDPS 291 (295)
Q Consensus 245 ---~~~~ivv~C~~g~rs---------~~aa~~L~~~G~~~v~~l~GG~~~W~~~~~p~ 291 (295)
++++|||||++|.++ ..++..|...|| +|++|+||+.+|...+.|.
T Consensus 79 ~~~~~~~ivvyc~~g~~~~~~~~~~~~~~~~~~L~~~G~-~v~~l~GG~~~w~~~g~~~ 136 (142)
T 2ouc_A 79 KRIFSKEIIVYDENTNEPSRVMPSQPLHIVLESLKREGK-EPLVLKGGLSSFKQNHENL 136 (142)
T ss_dssp HHHHHSCEEEECSSCCCGGGCCTTSHHHHHHHHHHHTTC-CCEEETTHHHHHTTTCGGG
T ss_pred hccCCCcEEEEECCCCchhhcCcccHHHHHHHHHHHcCC-cEEEEccCHHHHHHHCHHh
Confidence 278999999999885 467888999999 9999999999999887653
No 53
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=99.73 E-value=1.4e-18 Score=156.09 Aligned_cols=104 Identities=10% Similarity=0.111 Sum_probs=84.8
Q ss_pred ccccchhhhhhccCCCccccceeecCcchhH-HhhcCCCCccccCccc-cCCCC----------cccccc--CCCCCcEE
Q 022540 185 QDIQPDELHKKMQDPNFHKEAQLIDVREPEE-VALSSLPGFQVLPLRQ-FGSWG----------PDITVK--FDPQKDTY 250 (295)
Q Consensus 185 ~~is~~el~~~L~~~~~~~~~~iiDvR~~~e-~~~ghIpgAinip~~~-l~~~~----------~~~~~~--~~~~~~iv 250 (295)
..++++++.+++.+ ++.+|||||++.| |..||||||+|||+.. +.... ...+.. ++++++||
T Consensus 40 ~~is~~~l~~~l~~----~~~~iiDvR~~~e~y~~gHIpGAi~ip~~~~~~~~~~~~~~~~~~~~~~l~~lgi~~~~~vV 115 (318)
T 3hzu_A 40 RLVTADWLSAHMGA----PGLAIVESDEDVLLYDVGHIPGAVKIDWHTDLNDPRVRDYINGEQFAELMDRKGIARDDTVV 115 (318)
T ss_dssp GEECHHHHHHHTTC----TTEEEEECCSSTTSGGGCBCTTEEECCHHHHHBCSSSSSBCCHHHHHHHHHHTTCCTTCEEE
T ss_pred ceecHHHHHHhccC----CCEEEEECCCChhHHhcCcCCCCeEeCchhhhccCcccCCCCHHHHHHHHHHcCCCCCCeEE
Confidence 34788899998876 4689999999887 9999999999999842 21100 111222 57899999
Q ss_pred EEeCCCh-hHHHHHHHHHHcCCCceEEccccHhhcccccCCCC
Q 022540 251 VMCHHGM-RSLQVAQWLQTQGFRRVFNVSGGIHAYATKVDPSI 292 (295)
Q Consensus 251 v~C~~g~-rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~~~p~~ 292 (295)
|||++|. +|..++..|+..||++|++|+||+.+|..++.|..
T Consensus 116 vyc~~g~~~a~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~ 158 (318)
T 3hzu_A 116 IYGDKSNWWAAYALWVFTLFGHADVRLLNGGRDLWLAERRETT 158 (318)
T ss_dssp EECSGGGHHHHHHHHHHHHTTCSCEEEETTHHHHHHHTTCCCB
T ss_pred EECCCCCccHHHHHHHHHHcCCCceEEccCCHHHHhhcCCCcc
Confidence 9999887 89999999999999999999999999999988764
No 54
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=99.72 E-value=3.9e-18 Score=153.18 Aligned_cols=101 Identities=24% Similarity=0.283 Sum_probs=83.6
Q ss_pred cccchhhhhhccCCCccccceeecCcchhHHhh----------------cCCCCccccCccccCCCCc---------ccc
Q 022540 186 DIQPDELHKKMQDPNFHKEAQLIDVREPEEVAL----------------SSLPGFQVLPLRQFGSWGP---------DIT 240 (295)
Q Consensus 186 ~is~~el~~~L~~~~~~~~~~iiDvR~~~e~~~----------------ghIpgAinip~~~l~~~~~---------~~~ 240 (295)
.++.+++.+.+.+ . .|||||++.||.. ||||||+|||+..+..... ..+
T Consensus 180 ~i~~~el~~~l~~-----~-~liDvR~~~e~~~~~~~~~~~~~~~~~~~GhIpGA~niP~~~~~~~~g~~~~~~~l~~~~ 253 (318)
T 3hzu_A 180 RAFRDDVLAILGA-----Q-PLIDVRSPEEYTGKRTHMPDYPEEGALRAGHIPTAVHIPWGKAADESGRFRSREELERLY 253 (318)
T ss_dssp BCCHHHHHHHTTT-----S-CEEECSCHHHHHTSCSSCTTSCSCSCSSCSBCTTCEECCGGGGBCTTSCBCCHHHHHHHT
T ss_pred cccHHHHHHhhcC-----C-eEEecCCHHHhcccccCccccccccCCcCcCCCCeeecCHHHhcCCCCcCCCHHHHHHHh
Confidence 4678889888875 2 8999999999998 9999999999976543211 112
Q ss_pred ccCCCCCcEEEEeCCChhHHHHHHHHHH-cCCCceEEccccHhhccc-ccCCCC
Q 022540 241 VKFDPQKDTYVMCHHGMRSLQVAQWLQT-QGFRRVFNVSGGIHAYAT-KVDPSI 292 (295)
Q Consensus 241 ~~~~~~~~ivv~C~~g~rs~~aa~~L~~-~G~~~v~~l~GG~~~W~~-~~~p~~ 292 (295)
..++++++|||||++|.||..++..|++ +||++|++|+|||.+|.. .+.|..
T Consensus 254 ~~l~~~~~ivvyC~sG~rs~~a~~~L~~~~G~~~v~~~~GG~~~W~~~~g~Pv~ 307 (318)
T 3hzu_A 254 DFINPDDQTVVYCRIGERSSHTWFVLTHLLGKADVRNYDGSWTEWGNAVRVPIV 307 (318)
T ss_dssp TTCCTTCCCEEECSSSHHHHHHHHHHHHTSCCSSCEECTTHHHHHTTSTTCCCB
T ss_pred cCCCCCCcEEEEcCChHHHHHHHHHHHHHcCCCCeeEeCCcHHHHhcCCCCCcc
Confidence 3467899999999999999999999997 999999999999999985 466653
No 55
>3f4a_A Uncharacterized protein YGR203W; protein phosphatase, rhodanese-like family, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.80A {Saccharomyces cerevisiae} PDB: 3fs5_A*
Probab=99.72 E-value=1.5e-19 Score=147.79 Aligned_cols=108 Identities=16% Similarity=0.207 Sum_probs=81.4
Q ss_pred hcccccchhhhhhccCCC---ccccceeecCcchhHHhhcCCCCccccCccccCCC---CccccccCC-------CCCcE
Q 022540 183 LLQDIQPDELHKKMQDPN---FHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSW---GPDITVKFD-------PQKDT 249 (295)
Q Consensus 183 ~~~~is~~el~~~L~~~~---~~~~~~iiDvR~~~e~~~ghIpgAinip~~~l~~~---~~~~~~~~~-------~~~~i 249 (295)
....++++++.+++.+.. ..++++|||||+ .||..||||||+|||+..+... ...+...+. .+++|
T Consensus 29 ~~~~Is~~eL~~~l~~~~~~~~~~~~~iIDVR~-~Ey~~GHIpGAiniP~~~l~~~~~~l~~l~~~~~~~~~~~~~~~~I 107 (169)
T 3f4a_A 29 NVKYLDPTELHRWMQEGHTTTLREPFQVVDVRG-SDYMGGHIKDGWHYAYSRLKQDPEYLRELKHRLLEKQADGRGALNV 107 (169)
T ss_dssp SEEEECHHHHHHHHHHTSCTTTCCCEEEEECCS-TTCTTCEETTCEECCHHHHHHCHHHHHHHHHHHHHHHHTSSSCEEE
T ss_pred CCcEeCHHHHHHHHhcCCccCcCCCEEEEECCc-hHHccCcCCCCEECCHHHhhcccccHHHHHHHHHhhcccccCCCeE
Confidence 345688999999987531 012479999999 8999999999999999877543 222222111 14799
Q ss_pred EEEeCCC-hhHHHHHHHHHH----cC--CCceEEccccHhhcccccCCC
Q 022540 250 YVMCHHG-MRSLQVAQWLQT----QG--FRRVFNVSGGIHAYATKVDPS 291 (295)
Q Consensus 250 vv~C~~g-~rs~~aa~~L~~----~G--~~~v~~l~GG~~~W~~~~~p~ 291 (295)
||||.+| .||..++.+|.+ .| +.+|++|+||+.+|...+.|.
T Consensus 108 VvyC~sG~~Rs~~aa~~l~~~L~~~G~~~~~V~~L~GG~~aW~~~~~~~ 156 (169)
T 3f4a_A 108 IFHCMLSQQRGPSAAMLLLRSLDTAELSRCRLWVLRGGFSRWQSVYGDD 156 (169)
T ss_dssp EEECSSSSSHHHHHHHHHHHTCCHHHHTTEEEEEETTHHHHHHHHHTTC
T ss_pred EEEeCCCCCcHHHHHHHHHHHHHHcCCCCCCEEEECCCHHHHHHHcCCc
Confidence 9999987 899988877765 36 578999999999999887654
No 56
>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A
Probab=99.72 E-value=7.4e-18 Score=144.49 Aligned_cols=96 Identities=30% Similarity=0.423 Sum_probs=80.5
Q ss_pred cccchhhhhhccCCCccccceeecCcchhHHhh----------cCCCCccccCccccCCCCccccc--cCCCCCcEEEEe
Q 022540 186 DIQPDELHKKMQDPNFHKEAQLIDVREPEEVAL----------SSLPGFQVLPLRQFGSWGPDITV--KFDPQKDTYVMC 253 (295)
Q Consensus 186 ~is~~el~~~L~~~~~~~~~~iiDvR~~~e~~~----------ghIpgAinip~~~l~~~~~~~~~--~~~~~~~ivv~C 253 (295)
.++.+++.+ +..|||+|++.||.. ||||||+|||+..+.... ++.. .++++++||+||
T Consensus 122 ~i~~~e~~~---------~~~liDvR~~~e~~~~~~~~~~~~~ghIpgA~~ip~~~~~~~~-e~~~~~~~~~~~~iv~~C 191 (230)
T 2eg4_A 122 LLTADEAAR---------HPLLLDVRSPEEFQGKVHPPCCPRGGRIPGSKNAPLELFLSPE-GLLERLGLQPGQEVGVYC 191 (230)
T ss_dssp BCCHHHHHT---------CSCEEECSCHHHHTTSCCCTTSSSCCBCTTCEECCGGGGGCCT-THHHHHTCCTTCEEEEEC
T ss_pred eeCHHHHhh---------CCeEEeCCCHHHcCcccCCCCCccCCCCCCcEEcCHHHhCChH-HHHHhcCCCCCCCEEEEc
Confidence 355666654 257999999999999 999999999998875531 1222 467899999999
Q ss_pred CCChhHHHHHHHHHHcCCCceEEccccHhhcccccCCCC
Q 022540 254 HHGMRSLQVAQWLQTQGFRRVFNVSGGIHAYATKVDPSI 292 (295)
Q Consensus 254 ~~g~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~~~p~~ 292 (295)
++|.||..++..|+.+| .+|++|+||+.+|...+.|..
T Consensus 192 ~~G~rs~~a~~~L~~~G-~~v~~~~Gg~~~W~~~g~p~~ 229 (230)
T 2eg4_A 192 HSGARSAVAFFVLRSLG-VRARNYLGSMHEWLQEGLPTE 229 (230)
T ss_dssp SSSHHHHHHHHHHHHTT-CEEEECSSHHHHHHHTTCCCB
T ss_pred CChHHHHHHHHHHHHcC-CCcEEecCcHHHHhhcCCCCC
Confidence 99999999999999999 899999999999999887753
No 57
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=99.72 E-value=6.9e-18 Score=149.17 Aligned_cols=104 Identities=21% Similarity=0.279 Sum_probs=84.9
Q ss_pred ccccchhhhhhcc---CCCccccceeecCcchhHHh----------------hcCCCCccccCccccCCCCc--------
Q 022540 185 QDIQPDELHKKMQ---DPNFHKEAQLIDVREPEEVA----------------LSSLPGFQVLPLRQFGSWGP-------- 237 (295)
Q Consensus 185 ~~is~~el~~~L~---~~~~~~~~~iiDvR~~~e~~----------------~ghIpgAinip~~~l~~~~~-------- 237 (295)
..++.+++.+.+. .. ...|||||++.||. .||||||+|||+..+.....
T Consensus 146 ~~i~~~el~~~l~~~~~~----~~~liDvR~~~e~~g~~~~~~~~~~~~~~~~ghIpgA~~ip~~~~~~~~~~~~~~~~l 221 (285)
T 1uar_A 146 IRAYRDDVLEHIIKVKEG----KGALVDVRSPQEYRGELTHMPDYPQEGALRAGHIPGAKNIPWAKAVNPDGTFKSAEEL 221 (285)
T ss_dssp GEECHHHHHHHHHHHHTT----SEEEEECSCHHHHHTCC--------CCCSCCSBCTTCEECCGGGGBCTTSCBCCHHHH
T ss_pred eEEcHHHHHHHHhhcccC----CCcEEEcCCccceeeeccccccccccccccCCcCCCccccCHHHhcCCCCcCCCHHHH
Confidence 3478888988884 11 23699999999998 79999999999987754211
Q ss_pred -ccccc--CCCCCcEEEEeCCChhHHHHHHHHH-HcCCCceEEccccHhhcc-cccCCCC
Q 022540 238 -DITVK--FDPQKDTYVMCHHGMRSLQVAQWLQ-TQGFRRVFNVSGGIHAYA-TKVDPSI 292 (295)
Q Consensus 238 -~~~~~--~~~~~~ivv~C~~g~rs~~aa~~L~-~~G~~~v~~l~GG~~~W~-~~~~p~~ 292 (295)
..+.. ++++++|||||++|.||..++..|+ .+||++|++|+||+.+|. ..+.|..
T Consensus 222 ~~~~~~~g~~~~~~ivvyC~~G~rs~~a~~~L~~~~G~~~v~~l~GG~~~W~~~~g~pv~ 281 (285)
T 1uar_A 222 RALYEPLGITKDKDIVVYCRIAERSSHSWFVLKYLLGYPHVKNYDGSWTEWGNLVGVPIA 281 (285)
T ss_dssp HHHHGGGTCCTTSEEEEECSSHHHHHHHHHHHHTTSCCSCEEEESSHHHHHTTSTTCCCB
T ss_pred HHHHHHcCCCCCCCEEEECCchHHHHHHHHHHHHHcCCCCcceeCchHHHHhcCCCCCcc
Confidence 12222 6789999999999999999999999 999999999999999998 6777764
No 58
>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A
Probab=99.71 E-value=1.4e-17 Score=146.66 Aligned_cols=100 Identities=27% Similarity=0.358 Sum_probs=81.5
Q ss_pred ccchhhhhhccCCCccccceeecCcchhHHhh----------------cCCCCccccCccccCCCCc---------cccc
Q 022540 187 IQPDELHKKMQDPNFHKEAQLIDVREPEEVAL----------------SSLPGFQVLPLRQFGSWGP---------DITV 241 (295)
Q Consensus 187 is~~el~~~L~~~~~~~~~~iiDvR~~~e~~~----------------ghIpgAinip~~~l~~~~~---------~~~~ 241 (295)
++.+++.+.+.+ .. |||+|++.||.. ||||||+|||+..+..... ..+.
T Consensus 146 ~~~~el~~~~~~----~~--liDvR~~~e~~~~~~~~~~~~~~~~~~~ghIpgA~~ip~~~~~~~~~~~~~~~~l~~~~~ 219 (277)
T 3aay_A 146 AFRDEVLAAINV----KN--LIDVRSPDEFSGKILAPAHLPQEQSQRPGHIPGAINVPWSRAANEDGTFKSDEELAKLYA 219 (277)
T ss_dssp ECHHHHHHTTTT----SE--EEECSCHHHHHTSCCC-----CCCCSCCSBCTTCEECCGGGGBCTTSCBCCHHHHHHHHH
T ss_pred cCHHHHHHhcCC----CC--EEEeCChHHeeeeecccccccccccccCCcCCCceecCHHHhcCCCCcCCCHHHHHHHHH
Confidence 567788888765 23 999999999986 9999999999986533211 1111
Q ss_pred --cCCCCCcEEEEeCCChhHHHHHHHHHH-cCCCceEEccccHhhccc-ccCCCC
Q 022540 242 --KFDPQKDTYVMCHHGMRSLQVAQWLQT-QGFRRVFNVSGGIHAYAT-KVDPSI 292 (295)
Q Consensus 242 --~~~~~~~ivv~C~~g~rs~~aa~~L~~-~G~~~v~~l~GG~~~W~~-~~~p~~ 292 (295)
.++++++|||||++|.||..++..|++ +||++|++|+||+.+|.. .+.|..
T Consensus 220 ~~~~~~~~~iv~yC~~G~rs~~a~~~L~~~~G~~~v~~l~GG~~~W~~~~g~pv~ 274 (277)
T 3aay_A 220 DAGLDNSKETIAYCRIGERSSHTWFVLRELLGHQNVKNYDGSWTEYGSLVGAPIE 274 (277)
T ss_dssp HHTCCTTSCEEEECSSHHHHHHHHHHHHTTSCCSCEEEESSHHHHHTTSTTCCCB
T ss_pred HcCCCCCCCEEEEcCcHHHHHHHHHHHHHHcCCCcceeeCchHHHHhcCCCCCCc
Confidence 357899999999999999999999996 999999999999999998 777754
No 59
>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A
Probab=99.71 E-value=3.3e-18 Score=150.64 Aligned_cols=103 Identities=11% Similarity=0.087 Sum_probs=83.7
Q ss_pred cccchhhhhhccCCCccccceeecCcc-hhHHhhcCCCCccccCccccCCC-----------Ccccccc--CCCCCcEEE
Q 022540 186 DIQPDELHKKMQDPNFHKEAQLIDVRE-PEEVALSSLPGFQVLPLRQFGSW-----------GPDITVK--FDPQKDTYV 251 (295)
Q Consensus 186 ~is~~el~~~L~~~~~~~~~~iiDvR~-~~e~~~ghIpgAinip~~~l~~~-----------~~~~~~~--~~~~~~ivv 251 (295)
.++++++.+++.+ .+.+|||||+ +.||..||||||+|||+..+... ....+.. ++++++|||
T Consensus 7 ~is~~~l~~~l~~----~~~~liDvR~~~~ey~~ghIpgA~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~vvv 82 (277)
T 3aay_A 7 LVSADWAESNLHA----PKVVFVEVDEDTSAYDRDHIAGAIKLDWRTDLQDPVKRDFVDAQQFSKLLSERGIANEDTVIL 82 (277)
T ss_dssp EECHHHHHTTTTC----TTEEEEEEESSSHHHHHCBSTTCEEEETTTTTBCSSSSSBCCHHHHHHHHHHHTCCTTSEEEE
T ss_pred eEcHHHHHHHhCC----CCEEEEEcCCChhhHhhCCCCCcEEecccccccCCCCCCCCCHHHHHHHHHHcCCCCCCeEEE
Confidence 4778899888876 4678999998 89999999999999998753210 0111122 578999999
Q ss_pred EeCCCh-hHHHHHHHHHHcCCCceEEccccHhhcccccCCCC
Q 022540 252 MCHHGM-RSLQVAQWLQTQGFRRVFNVSGGIHAYATKVDPSI 292 (295)
Q Consensus 252 ~C~~g~-rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~~~p~~ 292 (295)
||.+|. +|..++..|+.+||++|++|+||+.+|...+.|..
T Consensus 83 yc~~g~~~s~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~ 124 (277)
T 3aay_A 83 YGGNNNWFAAYAYWYFKLYGHEKVKLLDGGRKKWELDGRPLS 124 (277)
T ss_dssp ECSGGGHHHHHHHHHHHHTTCCSEEEETTHHHHHHHTTCCCB
T ss_pred ECCCCCchHHHHHHHHHHcCCCcEEEecCCHHHHHHcCCccc
Confidence 999875 68899999999999999999999999998887754
No 60
>3nrk_A LIC12922; NC domain, parvulin domain, SURA homology, probable chaperon unknown function; 3.10A {Leptospira interrogans serovar copenhaorganism_taxid}
Probab=99.70 E-value=4e-18 Score=153.53 Aligned_cols=109 Identities=15% Similarity=0.218 Sum_probs=92.6
Q ss_pred ChHhh-hccccCCCCCCCCCCCccEEEeeEEe-cc--------chHHHHHHHHHH-hcCCCcHHHHHHHhCCCC-CccCC
Q 022540 67 TSPKA-ASFSSGTEGSSPGGGDREILVQHLLV-KE--------DDLNLLSELQRR-VSQGEDLSDLAVEHSICP-SKGEG 134 (295)
Q Consensus 67 ~~~e~-~~~~~~~~~~~~~~~~~~~~~~hIl~-~~--------~~~~~a~~~~~~-i~~g~~F~~~a~~~S~~~-~~~~g 134 (295)
++.|. ++|..+.. .-+..++++|||+ +. .++++|++++++ |++|++|+++|++||+|+ ++.+|
T Consensus 141 td~ei~~yy~~~~~-----~~~~~~~~~~Ili~~~~~~~~~~~~~~~~a~~i~~~~l~~g~~F~~lA~~~S~d~~s~~~g 215 (325)
T 3nrk_A 141 NEQEIRSWYNQNKD-----KVGFEIRYRIISIAPENDSIQEENRLYKEVSEIRKSILADPSSFALIAGSPRNDPALRARR 215 (325)
T ss_dssp CHHHHHHHHHHCHH-----HHCEEEEEEEEEECCSSSCHHHHHHHHHHHHHHHHHHHHCTTHHHHHHHSTTSCHHHHHTT
T ss_pred CHHHHHHHHHHhhh-----hcCcceEEEEEEEecCCCCccchHHHHHHHHHHHHHHHhCCCCHHHHHHHhCCCccccccC
Confidence 55555 44545543 2356799999999 32 356779999999 999999999999999998 66999
Q ss_pred CccccccCCCCc---HHHHHHHHhCCCCccc-cccccc-eeEEEeeehhhh
Q 022540 135 GMLGWVRKGQLV---PEFEEVAFTTPLNKVA-RCKTKF-GWHLLQVLSERE 180 (295)
Q Consensus 135 G~lg~~~~~~~~---~~~~~~~~~l~~G~vs-pv~~~~-G~~ii~v~~~~~ 180 (295)
|+|||+..+.++ |+|.+++|+|++|++| ||++++ ||||+++.++++
T Consensus 216 G~lg~~~~~~l~~~~~~~~~a~~~l~~Geis~pv~t~~~G~hIikv~~~~~ 266 (325)
T 3nrk_A 216 GMVEWISSFDLYKYSKITATIAAPLPNGGVSEVFRDERKRYCILKIEGKRP 266 (325)
T ss_dssp TEEEEEEHHHHHHHCHHHHHHHTTCCTTCBCCCEECTTSCEEEEEEEEEEE
T ss_pred CcccccccccccccCHHHHHHHHcCCCCCCCceEEeCCCeEEEEEEeccCC
Confidence 999999999999 9999999999999999 999999 999999998753
No 61
>3tg1_B Dual specificity protein phosphatase 10; kinase/rhodanese-like domain, docking interaction, transfera hydrolase complex; 2.71A {Homo sapiens}
Probab=99.70 E-value=1.9e-17 Score=133.82 Aligned_cols=104 Identities=20% Similarity=0.182 Sum_probs=77.4
Q ss_pred cccccchhhhhhccCCC----ccccceeecCcchhHHhhcCCCCccccCccccC------C-CCc--ccc------ccC-
Q 022540 184 LQDIQPDELHKKMQDPN----FHKEAQLIDVREPEEVALSSLPGFQVLPLRQFG------S-WGP--DIT------VKF- 243 (295)
Q Consensus 184 ~~~is~~el~~~L~~~~----~~~~~~iiDvR~~~e~~~ghIpgAinip~~~l~------~-~~~--~~~------~~~- 243 (295)
...++++++.+++.... ..++.+|||||++.||..||||||+|||+..+. . ..+ .++ ..+
T Consensus 10 ~~~is~~el~~~l~~~~~~~~~~~~~~liDvR~~~e~~~ghI~ga~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (158)
T 3tg1_B 10 IKIIYPNDLAKKMTKCSKSHLPSQGPVIIDCRPFMEYNKSHIQGAVHINCADKISRRRLQQGKITVLDLISCREGKDSFK 89 (158)
T ss_dssp -CEECHHHHHHHHCC----------CEEEECSCHHHHHHCCBTTCEECCCSSHHHHHHHTTSSCCHHHHTCCCCSSCSST
T ss_pred CcEecHHHHHHHHHhcccccCCCCCEEEEEcCCHHHHHhCCCCCceeechhHHHHHhhhhcCcccHHhhcCCHHHHHHHh
Confidence 44578889998887310 014578999999999999999999999998752 1 110 000 111
Q ss_pred -CCCCcEEEEeCCC---------hhHHHHHHHHHHcCCCceEEccccHhhccccc
Q 022540 244 -DPQKDTYVMCHHG---------MRSLQVAQWLQTQGFRRVFNVSGGIHAYATKV 288 (295)
Q Consensus 244 -~~~~~ivv~C~~g---------~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~~ 288 (295)
.++++|||||.+| .+|..++..|+..|| +|++|+||+.+|....
T Consensus 90 ~~~~~~IVvyc~~g~~~~~~~~~~~s~~a~~~L~~~G~-~v~~L~GG~~~W~~~~ 143 (158)
T 3tg1_B 90 RIFSKEIIVYDENTNEPSRVMPSQPLHIVLESLKREGK-EPLVLKGGLSSFKQNH 143 (158)
T ss_dssp TTTTSCEEEECSCCSCTTSCCSSSHHHHHHHHHHTTTC-CEEEETTHHHHHTSSC
T ss_pred ccCCCeEEEEECCCCcccccCcchHHHHHHHHHHhCCC-cEEEeCCcHHHHHHHh
Confidence 2478999999999 468999999999999 6999999999997653
No 62
>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A
Probab=99.70 E-value=2.6e-17 Score=146.30 Aligned_cols=107 Identities=13% Similarity=0.164 Sum_probs=85.2
Q ss_pred cccchhhhhhccCCCccccceeecCc--------chhHHhhcCCCCccccCccccCCCCc---cc----------cc--c
Q 022540 186 DIQPDELHKKMQDPNFHKEAQLIDVR--------EPEEVALSSLPGFQVLPLRQFGSWGP---DI----------TV--K 242 (295)
Q Consensus 186 ~is~~el~~~L~~~~~~~~~~iiDvR--------~~~e~~~ghIpgAinip~~~l~~~~~---~~----------~~--~ 242 (295)
.++++++.+++.+....++.+||||| ++.||..||||||+|||+..+..... .. +. .
T Consensus 9 ~is~~~l~~~l~~~~~~~~~~liDvR~~~~~~~~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~l~~lg 88 (296)
T 1rhs_A 9 LVSTKWLAESVRAGKVGPGLRVLDASWYSPGTREARKEYLERHVPGASFFDIEECRDKASPYEVMLPSEAGFADYVGSLG 88 (296)
T ss_dssp EECHHHHHHHHHTTCCBTTEEEEECCCCCTTSCCHHHHHHHSBCTTCEECCTTTSSCTTSSSSSCCCCHHHHHHHHHHTT
T ss_pred eeeHHHHHHHHhccccCCCeEEEEecccCcCCcchhhhHhhCcCCCCEEeCHHHhcCCCCCCCCCCCCHHHHHHHHHHcC
Confidence 57788898888651100257899999 68999999999999999987754321 11 11 2
Q ss_pred CCCCCcEEEEeCC--Chh-HHHHHHHHHHcCCCceEEccccHhhcccccCCCC
Q 022540 243 FDPQKDTYVMCHH--GMR-SLQVAQWLQTQGFRRVFNVSGGIHAYATKVDPSI 292 (295)
Q Consensus 243 ~~~~~~ivv~C~~--g~r-s~~aa~~L~~~G~~~v~~l~GG~~~W~~~~~p~~ 292 (295)
++++++|||||.+ |.+ +..++..|+..||++|++|+||+.+|...+.|..
T Consensus 89 i~~~~~vVvyc~~~~g~~~a~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~ 141 (296)
T 1rhs_A 89 ISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLNGGFRNWLKEGHPVT 141 (296)
T ss_dssp CCTTCEEEEECCCSSSCSSHHHHHHHHHHTTCCCEEEETTHHHHHHHTTCCCB
T ss_pred CCCCCeEEEEcCCCCCcchHHHHHHHHHHcCCCcEEEcCCCHHHHHHcCCccc
Confidence 5788999999998 876 7799999999999999999999999999888753
No 63
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=99.70 E-value=2.4e-18 Score=152.05 Aligned_cols=103 Identities=12% Similarity=0.194 Sum_probs=84.0
Q ss_pred cccchhhhhhccCCCccccceeecCc-chhHHhhcCCCCccccCccc-cCCC----------Ccccccc--CCCCCcEEE
Q 022540 186 DIQPDELHKKMQDPNFHKEAQLIDVR-EPEEVALSSLPGFQVLPLRQ-FGSW----------GPDITVK--FDPQKDTYV 251 (295)
Q Consensus 186 ~is~~el~~~L~~~~~~~~~~iiDvR-~~~e~~~ghIpgAinip~~~-l~~~----------~~~~~~~--~~~~~~ivv 251 (295)
.++++++.+++.+ .+.+||||| ++.+|..||||||+|||+.. +... ....+.. ++++++|||
T Consensus 9 ~is~~~l~~~l~~----~~~~liDvR~~~~e~~~ghIpgA~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~ivv 84 (285)
T 1uar_A 9 LVSTDWVQEHLED----PKVRVLEVDEDILLYDTGHIPGAQKIDWQRDFWDPVVRDFISEEEFAKLMERLGISNDTTVVL 84 (285)
T ss_dssp EECHHHHHTTTTC----TTEEEEEECSSTTHHHHCBCTTCEEECHHHHHBCSSSSSBCCHHHHHHHHHHTTCCTTCEEEE
T ss_pred eEcHHHHHHhcCC----CCEEEEEcCCCcchhhcCcCCCCEECCchhhccCCcccCCCCHHHHHHHHHHcCCCCCCeEEE
Confidence 4788899988875 467899999 78999999999999999974 2110 0111222 478999999
Q ss_pred EeCCCh-hHHHHHHHHHHcCCCceEEccccHhhcccccCCCC
Q 022540 252 MCHHGM-RSLQVAQWLQTQGFRRVFNVSGGIHAYATKVDPSI 292 (295)
Q Consensus 252 ~C~~g~-rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~~~p~~ 292 (295)
||++|. +|..++..|+..||++|++|+||+.+|...+.|..
T Consensus 85 yc~~g~~~s~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~ 126 (285)
T 1uar_A 85 YGDKNNWWAAYAFWFFKYNGHKDVRLMNGGRQKWVEEGRPLT 126 (285)
T ss_dssp ECHHHHHHHHHHHHHHHHTTCSCEEEETTHHHHHHHHTCCCB
T ss_pred ECCCCCccHHHHHHHHHHcCCCCeEEecCCHHHHHHCCCccc
Confidence 999988 79999999999999999999999999998887654
No 64
>1hzm_A Dual specificity protein phosphatase 6; hydrolase; NMR {Homo sapiens} SCOP: c.46.1.1
Probab=99.70 E-value=3.7e-18 Score=137.25 Aligned_cols=100 Identities=13% Similarity=0.101 Sum_probs=74.4
Q ss_pred ccccchhhhhhccCCCccccceeecCcchhHHhhcCCCCccccCccccC------C--CCccc---------cccCCCCC
Q 022540 185 QDIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFG------S--WGPDI---------TVKFDPQK 247 (295)
Q Consensus 185 ~~is~~el~~~L~~~~~~~~~~iiDvR~~~e~~~ghIpgAinip~~~l~------~--~~~~~---------~~~~~~~~ 247 (295)
..++++++.+++.+.. .+.+|||||++.||..||||||+|||+..+. . ..... ...+++++
T Consensus 16 ~~is~~~l~~~l~~~~--~~~~liDvR~~~ey~~gHIpgAinip~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 93 (154)
T 1hzm_A 16 ISKTVAWLNEQLELGN--ERLLLMDCRPQELYESSHIESAINVAIPGIMLRRLQKGNLPVRALFTRGEDRDRFTRRCGTD 93 (154)
T ss_dssp SBSCCCCHHHHHHHCS--SSCEEECCSTTHHHHHHTSSSCCCCCCSSHHHHTBCCSCCCTTTTSTTSHHHHHHHHSTTSS
T ss_pred cccCHHHHHHHHhCCC--CCEEEEEcCCHHHHhhccccCceEeCccHHHHhhhhcCcccHHHhCCCHHHHHHHhccCCCC
Confidence 4577888888886520 2678999999999999999999999997642 1 00011 12246789
Q ss_pred cEEEEeCCChhH-------HHHHHHHHHc---CCCceEEccccHhhcccc
Q 022540 248 DTYVMCHHGMRS-------LQVAQWLQTQ---GFRRVFNVSGGIHAYATK 287 (295)
Q Consensus 248 ~ivv~C~~g~rs-------~~aa~~L~~~---G~~~v~~l~GG~~~W~~~ 287 (295)
+|||||.+|.++ ..++..|+.+ ||+ |++|+||+.+|...
T Consensus 94 ~iVvyc~~g~~~~~~~~aa~~~~~~l~~l~~~G~~-v~~L~GG~~~W~~~ 142 (154)
T 1hzm_A 94 TVVLYDESSSDWNENTGGESLLGLLLKKLKDEGCR-AFYLEGGFSKFQAE 142 (154)
T ss_dssp CEEECCCSSSSSCSCSSCCSHHHHHHHHHHHTTCC-CEECCCCHHHHHHH
T ss_pred eEEEEeCCCCccccccccchHHHHHHHHHHHCCCc-eEEEcChHHHHHHH
Confidence 999999998875 3335556654 998 99999999999764
No 65
>1m5y_A SurviVal protein, surviVal protein SURA; surviVal protein A, periplasmic molecular chaperone, membrane protein folding, GRAM negative bacteria; 3.00A {Escherichia coli} SCOP: a.223.1.2 d.26.1.1 d.26.1.1 PDB: 2pv3_A
Probab=99.69 E-value=4.6e-18 Score=157.67 Aligned_cols=113 Identities=19% Similarity=0.318 Sum_probs=93.1
Q ss_pred ccChHhh-hccccCCCCCCCCCCCccEEEeeEEeccc----------hHHHHHHHHHHhcCCCcHHHHHHHhCCCCCccC
Q 022540 65 SFTSPKA-ASFSSGTEGSSPGGGDREILVQHLLVKED----------DLNLLSELQRRVSQGEDLSDLAVEHSICPSKGE 133 (295)
Q Consensus 65 ~~~~~e~-~~~~~~~~~~~~~~~~~~~~~~hIl~~~~----------~~~~a~~~~~~i~~g~~F~~~a~~~S~~~~~~~ 133 (295)
.|++.|. ++|..+.. .+..+++++++||+++.+ .+++|++++++|++|++|+++|++||+|+++.+
T Consensus 131 ~vsd~ei~~~y~~~~~---~~~~~~~~~~~~i~i~~~~~~s~~~~~~~~~~a~~~~~~l~~g~~F~~lA~~~S~~~~~~~ 207 (408)
T 1m5y_A 131 TILPQEVESLAQQVGN---QNDASTELNLSHILIPLPENPTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALN 207 (408)
T ss_dssp CCCTTHHHHHHHCC----------CCEEEEEEEEECCSSCCHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHCCSTTGGG
T ss_pred CCCHHHHHHHHHhhhh---hcCCcccEEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHcCCCccccc
Confidence 4455555 34444432 335678999999999853 256799999999999999999999999999999
Q ss_pred CCccccccCCCCcHHHHHHHHhCCCCccc-cccccceeEEEeeehhhh
Q 022540 134 GGMLGWVRKGQLVPEFEEVAFTTPLNKVA-RCKTKFGWHLLQVLSERE 180 (295)
Q Consensus 134 gG~lg~~~~~~~~~~~~~~~~~l~~G~vs-pv~~~~G~~ii~v~~~~~ 180 (295)
||+|||+..+.++++|.++++.|++|++| ||++++|||++++.+.++
T Consensus 208 gG~lg~~~~~~l~~~~~~~~~~l~~G~vs~pv~~~~g~~iikv~~~~~ 255 (408)
T 1m5y_A 208 GGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRG 255 (408)
T ss_dssp TTEEEEECGGGSCHHHHTGGGTCCTTCEEEEEEETTEEEEEEEEEECC
T ss_pred CCcccccchhhccHHHHHHHHhCCCCCccCeeecCCeEEEEEEEEecC
Confidence 99999999999999999999999999999 999999999999988665
No 66
>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2
Probab=99.69 E-value=8.2e-18 Score=161.36 Aligned_cols=104 Identities=17% Similarity=0.118 Sum_probs=88.5
Q ss_pred cccccchhhhhhccCCCccccceeecCcchhHHhhcCCCCccccCccccCCCCccccccCCCCCcEEEEeCCChhHHHHH
Q 022540 184 LQDIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSWGPDITVKFDPQKDTYVMCHHGMRSLQVA 263 (295)
Q Consensus 184 ~~~is~~el~~~L~~~~~~~~~~iiDvR~~~e~~~ghIpgAinip~~~l~~~~~~~~~~~~~~~~ivv~C~~g~rs~~aa 263 (295)
...++++++.+.+.+. ++.+|||||++.||..||||||+|||+..|..+...+. .+++++|||||++|.+|..++
T Consensus 6 ~~~is~~~l~~~l~~~---~~~~liDvR~~~e~~~ghIpgAv~ip~~~~~~~~~~l~--~~~~~~iVvyc~~g~~s~~a~ 80 (539)
T 1yt8_A 6 IAVRTFHDIRAALLAR---RELALLDVREEDPFAQAHPLFAANLPLSRLELEIHARV--PRRDTPITVYDDGEGLAPVAA 80 (539)
T ss_dssp CEEECHHHHHHHHHHT---CCBEEEECSCHHHHTTSBCTTCEECCGGGHHHHHHHHS--CCTTSCEEEECSSSSHHHHHH
T ss_pred CcccCHHHHHHHHhCC---CCeEEEECCCHHHHhcCcCCCCEECCHHHHHHHHHhhC--CCCCCeEEEEECCCChHHHHH
Confidence 3457888999988652 36799999999999999999999999988754422221 147899999999999999999
Q ss_pred HHHHHcCCCceEEccccHhhcccccCCCC
Q 022540 264 QWLQTQGFRRVFNVSGGIHAYATKVDPSI 292 (295)
Q Consensus 264 ~~L~~~G~~~v~~l~GG~~~W~~~~~p~~ 292 (295)
..|+..||++|++|+||+.+|...+.|..
T Consensus 81 ~~L~~~G~~~V~~L~GG~~~W~~~g~p~~ 109 (539)
T 1yt8_A 81 QRLHDLGYSDVALLDGGLSGWRNAGGELF 109 (539)
T ss_dssp HHHHHTTCSSEEEETTHHHHHHHTTCCCB
T ss_pred HHHHHcCCCceEEeCCCHHHHHhcCCCcc
Confidence 99999999999999999999999998864
No 67
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=99.68 E-value=3.7e-17 Score=157.54 Aligned_cols=95 Identities=22% Similarity=0.381 Sum_probs=82.7
Q ss_pred hcccccchhhhhhccCCCccccceeecCcchhHHhhcCCCCccccCccccCCCCccccccCCCCCcEEEEeCCChhHHHH
Q 022540 183 LLQDIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSWGPDITVKFDPQKDTYVMCHHGMRSLQV 262 (295)
Q Consensus 183 ~~~~is~~el~~~L~~~~~~~~~~iiDvR~~~e~~~ghIpgAinip~~~l~~~~~~~~~~~~~~~~ivv~C~~g~rs~~a 262 (295)
....++++++.++ + ++..|||||++.||..||||||+|||+..+... +..++++++||+||++|.||..+
T Consensus 471 ~~~~i~~~~~~~~--~----~~~~~iDvR~~~e~~~~~i~ga~~ip~~~l~~~----~~~~~~~~~iv~~c~~g~rs~~a 540 (565)
T 3ntd_A 471 DATPIHFDQIDNL--S----EDQLLLDVRNPGELQNGGLEGAVNIPVDELRDR----MHELPKDKEIIIFSQVGLRGNVA 540 (565)
T ss_dssp SCCEECTTTTTSC--C----TTEEEEECSCGGGGGGCCCTTCEECCGGGTTTS----GGGSCTTSEEEEECSSSHHHHHH
T ss_pred ccceeeHHHHHhC--C----CCcEEEEeCCHHHHhcCCCCCcEECCHHHHHHH----HhhcCCcCeEEEEeCCchHHHHH
Confidence 3455777777766 2 567999999999999999999999999988654 44578999999999999999999
Q ss_pred HHHHHHcCCCceEEccccHhhccccc
Q 022540 263 AQWLQTQGFRRVFNVSGGIHAYATKV 288 (295)
Q Consensus 263 a~~L~~~G~~~v~~l~GG~~~W~~~~ 288 (295)
+..|++.|| +|++|+||+.+|...+
T Consensus 541 ~~~l~~~G~-~v~~l~gG~~~w~~~g 565 (565)
T 3ntd_A 541 YRQLVNNGY-RARNLIGGYRTYKFAS 565 (565)
T ss_dssp HHHHHHTTC-CEEEETTHHHHHHHTC
T ss_pred HHHHHHcCC-CEEEEcChHHHHHhCc
Confidence 999999999 9999999999998654
No 68
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.67 E-value=3.2e-17 Score=158.87 Aligned_cols=99 Identities=30% Similarity=0.548 Sum_probs=86.7
Q ss_pred hhcccccchhhhhhccCCCccccceeecCcchhHHhhcCCCCccccCccccCCCCccccccCCCCCcEEEEeCCChhHHH
Q 022540 182 SLLQDIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSWGPDITVKFDPQKDTYVMCHHGMRSLQ 261 (295)
Q Consensus 182 ~~~~~is~~el~~~L~~~~~~~~~~iiDvR~~~e~~~ghIpgAinip~~~l~~~~~~~~~~~~~~~~ivv~C~~g~rs~~ 261 (295)
.....++++++.+++.+ +..|||||++.||..||||||+|||+..+... +..++++++||+||++|.||..
T Consensus 486 ~~~~~i~~~~~~~~~~~-----~~~~iDvR~~~e~~~ghi~ga~~ip~~~l~~~----~~~l~~~~~iv~~C~~g~rs~~ 556 (588)
T 3ics_A 486 GFVDTVQWHEIDRIVEN-----GGYLIDVREPNELKQGMIKGSINIPLDELRDR----LEEVPVDKDIYITCQLGMRGYV 556 (588)
T ss_dssp TSCCEECTTTHHHHHHT-----TCEEEECSCGGGGGGCBCTTEEECCHHHHTTC----GGGSCSSSCEEEECSSSHHHHH
T ss_pred cccceecHHHHHHHhcC-----CCEEEEcCCHHHHhcCCCCCCEECCHHHHHHH----HhhCCCCCeEEEECCCCcHHHH
Confidence 33556888899888863 57899999999999999999999999988654 4456899999999999999999
Q ss_pred HHHHHHHcCCCceEEccccHhhcccccCC
Q 022540 262 VAQWLQTQGFRRVFNVSGGIHAYATKVDP 290 (295)
Q Consensus 262 aa~~L~~~G~~~v~~l~GG~~~W~~~~~p 290 (295)
++..|++.||+ |++|+||+.+|.....+
T Consensus 557 a~~~l~~~G~~-v~~l~GG~~~w~~~~~~ 584 (588)
T 3ics_A 557 AARMLMEKGYK-VKNVDGGFKLYGTVLPE 584 (588)
T ss_dssp HHHHHHHTTCC-EEEETTHHHHHHHHCGG
T ss_pred HHHHHHHcCCc-EEEEcchHHHHHhhhhh
Confidence 99999999998 99999999999876544
No 69
>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2
Probab=99.67 E-value=2e-17 Score=158.68 Aligned_cols=100 Identities=16% Similarity=0.232 Sum_probs=88.7
Q ss_pred ccccchhhhhhccCCCccccceeecCcchhHHhhcCCCCccccCccccCCCCccccccCCCCCcEEEEeCCChhHHHHHH
Q 022540 185 QDIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSWGPDITVKFDPQKDTYVMCHHGMRSLQVAQ 264 (295)
Q Consensus 185 ~~is~~el~~~L~~~~~~~~~~iiDvR~~~e~~~ghIpgAinip~~~l~~~~~~~~~~~~~~~~ivv~C~~g~rs~~aa~ 264 (295)
..++.+++.+.+.+ .+..|||||++.||..||||||+|+|...|... +..++++++|||||.+|.||..++.
T Consensus 377 ~~i~~~~l~~~l~~----~~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~~----l~~l~~~~~ivv~C~sG~rs~~aa~ 448 (539)
T 1yt8_A 377 DTIDPTTLADWLGE----PGTRVLDFTASANYAKRHIPGAAWVLRSQLKQA----LERLGTAERYVLTCGSSLLARFAVA 448 (539)
T ss_dssp CEECHHHHHHHTTS----TTEEEEECSCHHHHHHCBCTTCEECCGGGHHHH----HHHHCCCSEEEEECSSSHHHHHHHH
T ss_pred CccCHHHHHHHhcC----CCeEEEEeCCHHHhhcCcCCCchhCCHHHHHHH----HHhCCCCCeEEEEeCCChHHHHHHH
Confidence 45778888888876 467899999999999999999999999887543 3446889999999999999999999
Q ss_pred HHHHcCCCceEEccccHhhcccccCCCC
Q 022540 265 WLQTQGFRRVFNVSGGIHAYATKVDPSI 292 (295)
Q Consensus 265 ~L~~~G~~~v~~l~GG~~~W~~~~~p~~ 292 (295)
.|+..||++|++|+||+.+|...+.|..
T Consensus 449 ~L~~~G~~~v~~l~GG~~~W~~~g~pv~ 476 (539)
T 1yt8_A 449 EVQALSGKPVFLLDGGTSAWVAAGLPTE 476 (539)
T ss_dssp HHHHHHCSCEEEETTHHHHHHHTTCCCB
T ss_pred HHHHcCCCCEEEeCCcHHHHHhCCCCcc
Confidence 9999999999999999999999888765
No 70
>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}
Probab=99.67 E-value=1.1e-16 Score=142.81 Aligned_cols=107 Identities=13% Similarity=0.181 Sum_probs=83.1
Q ss_pred cccchhhhhhccCCCccccceeecCc---------chhHHhhcCCCCccccCccccCCCCc-------------ccccc-
Q 022540 186 DIQPDELHKKMQDPNFHKEAQLIDVR---------EPEEVALSSLPGFQVLPLRQFGSWGP-------------DITVK- 242 (295)
Q Consensus 186 ~is~~el~~~L~~~~~~~~~~iiDvR---------~~~e~~~ghIpgAinip~~~l~~~~~-------------~~~~~- 242 (295)
.++++++.+.+.+....++.+||||| ++.||..||||||+|||+..+..... ..+..
T Consensus 23 lIs~~~l~~~l~~~~~~~~~~ilDvR~~~~~~~~~~~~ey~~gHIpGAi~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~l 102 (302)
T 3olh_A 23 MVSAQWVAEALRAPRAGQPLQLLDASWYLPKLGRDARREFEERHIPGAAFFDIDQCSDRTSPYDHMLPGAEHFAEYAGRL 102 (302)
T ss_dssp EECHHHHHHHHHCCCSSCCEEEEECCCCCCC--CCHHHHHHHSCCTTCEECCTTTSSCSSCSSSSCCCCHHHHHHHHHHT
T ss_pred ccCHHHHHHHhcCcCCCCCEEEEEeecCCCccCcccHHHHhhCcCCCCeEeCHHHhcCcCCCCCCCCCCHHHHHHHHHHc
Confidence 47888999988752111267999999 88999999999999999976532210 11112
Q ss_pred -CCCCCcEEEEeCC---ChhHHHHHHHHHHcCCCceEEccccHhhcccccCCCC
Q 022540 243 -FDPQKDTYVMCHH---GMRSLQVAQWLQTQGFRRVFNVSGGIHAYATKVDPSI 292 (295)
Q Consensus 243 -~~~~~~ivv~C~~---g~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~~~p~~ 292 (295)
++++++|||||++ +.+|..++..|+..||++|++|+||+.+|..++.|..
T Consensus 103 gi~~~~~VVvyc~~~~g~~~a~ra~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~ 156 (302)
T 3olh_A 103 GVGAATHVVIYDASDQGLYSAPRVWWMFRAFGHHAVSLLDGGLRHWLRQNLPLS 156 (302)
T ss_dssp TCCSSCEEEEECCCTTSCSSHHHHHHHHHHTTCCCEEEETTHHHHHHHSCCC-C
T ss_pred CCCCCCEEEEEeCCCCCcchHHHHHHHHHHcCCCcEEECCCCHHHHHHcCCCcc
Confidence 3788999999964 3468999999999999999999999999999887654
No 71
>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A
Probab=99.66 E-value=6.9e-17 Score=150.56 Aligned_cols=102 Identities=17% Similarity=0.299 Sum_probs=81.8
Q ss_pred cccchhhhhhccCCCccccceeecCcchhHH-----------hhcCCCCccccCcc-------ccCCCCc------cc--
Q 022540 186 DIQPDELHKKMQDPNFHKEAQLIDVREPEEV-----------ALSSLPGFQVLPLR-------QFGSWGP------DI-- 239 (295)
Q Consensus 186 ~is~~el~~~L~~~~~~~~~~iiDvR~~~e~-----------~~ghIpgAinip~~-------~l~~~~~------~~-- 239 (295)
.++.+++.+.+.+ .+..|||||++.|| ..||||||+|+|+. .+..... .+
T Consensus 273 ~i~~~e~~~~l~~----~~~~liDvR~~~e~~G~~~~~~~~~~~GhIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~~l~~ 348 (423)
T 2wlr_A 273 MLDMEQARGLLHR----QDASLVSIRSWPEFIGTTSGYSYIKPKGEIAGARWGHAGSDSTHMEDFHNPDGTMRSADDITA 348 (423)
T ss_dssp EECHHHHHTTTTC----SSEEEEECSCHHHHHTSCCSSTTCCCCSEETTCEECCCCSSTTCCGGGBCTTSSBCCHHHHHH
T ss_pred eecHHHHHHHhcC----CCceEEecCchhheeeeccCCCCCCcCCCCCCccccccccccccHHHHcCCCCcCCCHHHHHH
Confidence 4677888888765 46789999999999 78999999999986 1111000 11
Q ss_pred -c--ccCCCCCcEEEEeCCChhHHHHHHHHHHcCCCceEEccccHhhccc-ccCCC
Q 022540 240 -T--VKFDPQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIHAYAT-KVDPS 291 (295)
Q Consensus 240 -~--~~~~~~~~ivv~C~~g~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~-~~~p~ 291 (295)
+ ..++++++|||||++|.||..++..|+.+||++|++|+||+.+|.. .+.|.
T Consensus 349 ~~~~~~~~~~~~ivvyC~sG~rs~~aa~~L~~~G~~~v~~~~GG~~~W~~~~~~Pv 404 (423)
T 2wlr_A 349 MWKAWNIKPEQQVSFYCGTGWRASETFMYARAMGWKNVSVYDGGWYEWSSDPKNPV 404 (423)
T ss_dssp HHHTTTCCTTSEEEEECSSSHHHHHHHHHHHHTTCSSEEEESSHHHHHTTSTTSCE
T ss_pred HHHHcCCCCCCcEEEECCcHHHHHHHHHHHHHcCCCCcceeCccHHHHhcCCCCCc
Confidence 1 2357899999999999999999999999999999999999999987 55554
No 72
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}
Probab=99.65 E-value=1.2e-16 Score=143.34 Aligned_cols=105 Identities=20% Similarity=0.311 Sum_probs=83.3
Q ss_pred ccchhhhhhccCCCccccceeecCcchhHHh-----------hcCCCCccccCccccCCCCcccc---------------
Q 022540 187 IQPDELHKKMQDPNFHKEAQLIDVREPEEVA-----------LSSLPGFQVLPLRQFGSWGPDIT--------------- 240 (295)
Q Consensus 187 is~~el~~~L~~~~~~~~~~iiDvR~~~e~~-----------~ghIpgAinip~~~l~~~~~~~~--------------- 240 (295)
++.+++.+.+.+.......+|||+|++.+|. .||||||+|+|+..+........
T Consensus 186 ~~~~~v~~~v~~~~~~~~~~lvDaRs~~rf~G~~~ep~~~~r~GHIPGA~nlP~~~~ld~~~~~~~~~~e~l~~~l~~~~ 265 (327)
T 3utn_X 186 VDYEEMFQLVKSGELAKKFNAFDARSLGRFEGTEPEPRSDIPSGHIPGTQPLPYGSLLDPETKTYPEAGEAIHATLEKAL 265 (327)
T ss_dssp ECHHHHHHHHHTTCHHHHCEEEECSCHHHHHTSSCCSSSSCCCCBCTTEEECCGGGGSCTTTCCCCCTTHHHHHHHHHHH
T ss_pred ecHHHHhhhhhcccccccceeeccCccceecccccCccccccCCCCCCCcccChhhccCCCCCCCCCcHHHHHHHHHHHH
Confidence 5566777777653222356899999999996 39999999999987754321110
Q ss_pred ----ccCCCCCcEEEEeCCChhHHHHHHHHHHcCCCceEEccccHhhcccccCCC
Q 022540 241 ----VKFDPQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIHAYATKVDPS 291 (295)
Q Consensus 241 ----~~~~~~~~ivv~C~~g~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~~~p~ 291 (295)
..++++++||+||++|.+|+..+..|..+||++|.+|+|+|.+|....+|.
T Consensus 266 ~~~~~gid~~k~vI~yCgsGvtA~~~~laL~~lG~~~v~lYdGSWsEW~~r~~pe 320 (327)
T 3utn_X 266 KDFHCTLDPSKPTICSCGTGVSGVIIKTALELAGVPNVRLYDGSWTEWVLKSGPE 320 (327)
T ss_dssp HHTTCCCCTTSCEEEECSSSHHHHHHHHHHHHTTCCSEEEESSHHHHHHHHHCGG
T ss_pred HHhhcCCCCCCCEEEECChHHHHHHHHHHHHHcCCCCceeCCCcHHHhccccCCc
Confidence 135788999999999999999999999999999999999999999877664
No 73
>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A
Probab=99.64 E-value=9.3e-17 Score=149.66 Aligned_cols=105 Identities=17% Similarity=0.206 Sum_probs=82.8
Q ss_pred ccchhhhhhccCCCc----cccceeecCc--chhHHhhcCCCCccccCccccCCCCcc----------cc--ccCCCCCc
Q 022540 187 IQPDELHKKMQDPNF----HKEAQLIDVR--EPEEVALSSLPGFQVLPLRQFGSWGPD----------IT--VKFDPQKD 248 (295)
Q Consensus 187 is~~el~~~L~~~~~----~~~~~iiDvR--~~~e~~~ghIpgAinip~~~l~~~~~~----------~~--~~~~~~~~ 248 (295)
++.+++.+.+..... ..+..|||+| ++.||..||||||+|||+..+...... .+ ..++++++
T Consensus 126 i~~~~l~~~~~~~~~~~~~~~~~~liDvR~~~~~e~~~ghIpgA~nip~~~~~~~~~~~~~~~~~l~~~~~~~gi~~~~~ 205 (423)
T 2wlr_A 126 VYPQWLHDLQQGKEVTAKPAGDWKVIEAAWGAPKLYLISHIPGADYIDTNEVESEPLWNKVSDEQLKAMLAKHGIRHDTT 205 (423)
T ss_dssp ECHHHHHHHHTTCCCTTCCSSCEEEEEEESSSCSHHHHCBCTTCEEEEGGGTEETTTTEECCHHHHHHHHHHTTCCTTSE
T ss_pred cCHHHHHHHhhccccccccCCCeEEEEecCCCchhhccCcCCCcEEcCHHHhccCCCCCCCCHHHHHHHHHHcCCCCCCe
Confidence 555666666653210 1357899999 999999999999999999877431111 11 13578999
Q ss_pred EEEEeCCChhHHHHHHHHHHcCCCceEEccccHhhcccccCCC
Q 022540 249 TYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIHAYATKVDPS 291 (295)
Q Consensus 249 ivv~C~~g~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~~~p~ 291 (295)
||+||++|.+|..++..|+.+||++|++|+||+.+|...+.|.
T Consensus 206 ivvyC~~G~~a~~~~~~L~~~G~~~v~~l~Gg~~~W~~~g~pv 248 (423)
T 2wlr_A 206 VILYGRDVYAAARVAQIMLYAGVKDVRLLDGGWQTWSDAGLPV 248 (423)
T ss_dssp EEEECSSHHHHHHHHHHHHHHTCSCEEEETTTHHHHHHTTCCC
T ss_pred EEEECCCchHHHHHHHHHHHcCCCCeEEECCCHHHHhhCCCCc
Confidence 9999999999999999999999999999999999998877664
No 74
>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3
Probab=99.64 E-value=1.8e-16 Score=145.18 Aligned_cols=100 Identities=11% Similarity=0.100 Sum_probs=81.3
Q ss_pred ccccchhhhhhccCCCccccceeecCcc--------hhHHhhcCCCCccccCccc-cCCC--C---cc----------cc
Q 022540 185 QDIQPDELHKKMQDPNFHKEAQLIDVRE--------PEEVALSSLPGFQVLPLRQ-FGSW--G---PD----------IT 240 (295)
Q Consensus 185 ~~is~~el~~~L~~~~~~~~~~iiDvR~--------~~e~~~ghIpgAinip~~~-l~~~--~---~~----------~~ 240 (295)
..++++++.+++. . .+|||||+ +.||..||||||+|||+.. +... . .. .+
T Consensus 14 ~~Is~~el~~~l~-----~-~~iIDvR~~~~~~~~~~~ey~~gHIpGAi~ip~~~~l~~~~~~~~~~~~lp~~~~f~~~l 87 (373)
T 1okg_A 14 VFLDPSEVADHLA-----E-YRIVDCRYSLKIKDHGSIQYAKEHVKSAIRADVDTNLSKLVPTSTARHPLPPXAEFIDWC 87 (373)
T ss_dssp CEECHHHHTTCGG-----G-SEEEECCCCSSSTTTTTTHHHHCEETTCEECCTTTTSCCCCTTCCCSSCCCCHHHHHHHH
T ss_pred cEEcHHHHHHHcC-----C-cEEEEecCCccccccchhHHhhCcCCCCEEeCchhhhhcccccCCccccCCCHHHHHHHH
Confidence 4577888888775 2 68999998 6899999999999999986 6442 0 00 01
Q ss_pred --ccCCCCCcEEEEe-CCChhHH-HHHHHHHHcCCCceEEccccHhhcccccCCC
Q 022540 241 --VKFDPQKDTYVMC-HHGMRSL-QVAQWLQTQGFRRVFNVSGGIHAYATKVDPS 291 (295)
Q Consensus 241 --~~~~~~~~ivv~C-~~g~rs~-~aa~~L~~~G~~~v~~l~GG~~~W~~~~~p~ 291 (295)
..++++++||||| .+|.+|+ .++..|+.+|| +|++|+||+.+|...+.|.
T Consensus 88 ~~~gi~~d~~VVvYc~~~G~rsa~ra~~~L~~~G~-~V~~L~GG~~aW~~~g~pv 141 (373)
T 1okg_A 88 MANGMAGELPVLCYDDECGAMGGCRLWWMLNSLGA-DAYVINGGFQACKAAGLEM 141 (373)
T ss_dssp HHTTCSSSSCEEEECSSTTTTTHHHHHHHHHHHTC-CEEEETTTTHHHHTTTCCE
T ss_pred HHcCCCCCCeEEEEeCCCCchHHHHHHHHHHHcCC-eEEEeCCCHHHHHhhcCCc
Confidence 1347899999999 7788886 99999999999 9999999999999888764
No 75
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=99.63 E-value=2.4e-17 Score=155.45 Aligned_cols=80 Identities=24% Similarity=0.407 Sum_probs=0.0
Q ss_pred ccceeecCcchhHHhhcCCCCccccCccccCCCCccccccCCCCCcEEEEeCCChhHHHHHHHHHHcCCCceEEccccHh
Q 022540 203 KEAQLIDVREPEEVALSSLPGFQVLPLRQFGSWGPDITVKFDPQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIH 282 (295)
Q Consensus 203 ~~~~iiDvR~~~e~~~ghIpgAinip~~~l~~~~~~~~~~~~~~~~ivv~C~~g~rs~~aa~~L~~~G~~~v~~l~GG~~ 282 (295)
++..|||||++.||..||||||+|+|+..+... +..++++++||+||++|.||..++..|+..||++|++|+||+.
T Consensus 386 ~~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~~----~~~l~~~~~iv~~C~~G~rs~~a~~~L~~~G~~~v~~l~GG~~ 461 (466)
T 3r2u_A 386 NESHILDVRNDNEWNNGHLSQAVHVPHGKLLET----DLPFNKNDVIYVHCQSGIRSSIAIGILEHKGYHNIINVNEGYK 461 (466)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCcEEEEeCCHHHHhcCcCCCCEECCHHHHHHH----HhhCCCCCeEEEECCCChHHHHHHHHHHHcCCCCEEEecChHH
Confidence 457899999999999999999999999988654 3446899999999999999999999999999999999999999
Q ss_pred hccc
Q 022540 283 AYAT 286 (295)
Q Consensus 283 ~W~~ 286 (295)
+|..
T Consensus 462 ~W~~ 465 (466)
T 3r2u_A 462 DIQL 465 (466)
T ss_dssp ----
T ss_pred HHhh
Confidence 9974
No 76
>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3
Probab=99.62 E-value=1.7e-16 Score=145.30 Aligned_cols=84 Identities=15% Similarity=0.214 Sum_probs=69.5
Q ss_pred ccceeecCcchhHHh-----------hcCCCCccccCccccC--CCCcc-------c---cc----cCCC---CCcEEEE
Q 022540 203 KEAQLIDVREPEEVA-----------LSSLPGFQVLPLRQFG--SWGPD-------I---TV----KFDP---QKDTYVM 252 (295)
Q Consensus 203 ~~~~iiDvR~~~e~~-----------~ghIpgAinip~~~l~--~~~~~-------~---~~----~~~~---~~~ivv~ 252 (295)
.+..|||+|++.||. .||||||+|||+..+. ..... + +. .+++ +++||+|
T Consensus 173 ~~~~lIDvR~~~Ef~G~~~~~~~~~~~GhIpGAiniP~~~l~~~~~~~~~~~~~~~l~~~~~~~~~gi~~~~~d~~ivvy 252 (373)
T 1okg_A 173 PQAIITDARSADRFASTVRPYAADKMPGHIEGARNLPYTSHLVTRGDGKVLRSEEEIRHNIMTVVQGAGDAADLSSFVFS 252 (373)
T ss_dssp TTCCEEECSCHHHHTCCSSCCTTCSSSSCSTTCEECCGGGGEECCSSSCEECCHHHHHHHHHTTCC-----CCCTTSEEE
T ss_pred cCceEEeCCCHHHccccccccccCCcCccCCCcEEecHHHhhccCCCCCccCCHHHHHHHHHhhhcCCCcccCCCCEEEE
Confidence 467899999999999 9999999999998875 21111 1 12 2367 8999999
Q ss_pred eCCChhHHHHHHHHHHcCCCceEEccccHhhccc
Q 022540 253 CHHGMRSLQVAQWLQTQGFRRVFNVSGGIHAYAT 286 (295)
Q Consensus 253 C~~g~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~ 286 (295)
|++|.||..++..|+.+||++|++|+|||.+|..
T Consensus 253 C~sG~rs~~a~~~L~~~G~~~v~~~~GG~~~W~~ 286 (373)
T 1okg_A 253 CGSGVTACINIALVHHLGLGHPYLYCGSWSEYSG 286 (373)
T ss_dssp CSSSSTHHHHHHHHHHTTSCCCEECSSHHHHHHH
T ss_pred CCchHHHHHHHHHHHHcCCCCeeEeCChHHHHhc
Confidence 9999999999999999999999999999999976
No 77
>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A
Probab=99.59 E-value=7.1e-16 Score=132.07 Aligned_cols=80 Identities=19% Similarity=0.177 Sum_probs=65.9
Q ss_pred ccceeecCcchhHHhhcCCCCccccCcc--ccCCC-----------CccccccCCCCCcEEEEeCCCh-hHHHHHHHHHH
Q 022540 203 KEAQLIDVREPEEVALSSLPGFQVLPLR--QFGSW-----------GPDITVKFDPQKDTYVMCHHGM-RSLQVAQWLQT 268 (295)
Q Consensus 203 ~~~~iiDvR~~~e~~~ghIpgAinip~~--~l~~~-----------~~~~~~~~~~~~~ivv~C~~g~-rs~~aa~~L~~ 268 (295)
++.+|||+|++.||..||||||+|+|+. .+... ....+..++.+++|||||++|. +|..++..|+
T Consensus 5 ~~~~iiDvR~~~ey~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivvyc~~g~~~s~~a~~~L~- 83 (230)
T 2eg4_A 5 EDAVLVDTRPRPAYEAGHLPGARHLDLSAPKLRLREEAELKALEGGLTELFQTLGLRSPVVLYDEGLTSRLCRTAFFLG- 83 (230)
T ss_dssp TTCEEEECSCHHHHHHCBCTTCEECCCCSCCCCCCSHHHHHHHHHHHHHHHHHTTCCSSEEEECSSSCHHHHHHHHHHH-
T ss_pred CCEEEEECCChhhHhhCcCCCCEECCccchhcccCCCCCcCCCHHHHHHHHHhcCCCCEEEEEcCCCCccHHHHHHHHH-
Confidence 4678999999999999999999999998 44210 0112233455899999999998 9999999999
Q ss_pred cCCCceEEccccHhhccc
Q 022540 269 QGFRRVFNVSGGIHAYAT 286 (295)
Q Consensus 269 ~G~~~v~~l~GG~~~W~~ 286 (295)
+||++|++|+|| |..
T Consensus 84 ~G~~~v~~l~GG---W~~ 98 (230)
T 2eg4_A 84 LGGLEVQLWTEG---WEP 98 (230)
T ss_dssp HTTCCEEEECSS---CGG
T ss_pred cCCceEEEeCCC---Ccc
Confidence 999999999999 876
No 78
>1whb_A KIAA0055; deubiqutinating enzyme, UBPY, structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; NMR {Homo sapiens} SCOP: c.46.1.4
Probab=99.58 E-value=6.3e-16 Score=124.72 Aligned_cols=102 Identities=15% Similarity=0.086 Sum_probs=70.6
Q ss_pred cccccchhhhhhccCCCccccceeecCcchhHHhhcCCCCccccCccccCCCC--ccccccCC-----------CCCcEE
Q 022540 184 LQDIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSWG--PDITVKFD-----------PQKDTY 250 (295)
Q Consensus 184 ~~~is~~el~~~L~~~~~~~~~~iiDvR~~~e~~~ghIpgAinip~~~l~~~~--~~~~~~~~-----------~~~~iv 250 (295)
...++++++.+++.+.. .+.+|||||++.||..||||||+|||+..+.... ..+...++ +...||
T Consensus 14 ~~~i~~~~l~~~l~~~~--~~~~liDvR~~~ey~~gHI~gainip~~~~~~~~~~~~l~~~lp~~~~~~~~~~~~~~~VV 91 (157)
T 1whb_A 14 KGAITAKELYTMMTDKN--ISLIIMDARRMQDYQDSCILHSLSVPEEAISPGVTASWIEAHLPDDSKDTWKKRGNVEYVV 91 (157)
T ss_dssp CSEECHHHHHHHHTCSS--SCEEEEEESCHHHHHHCCBTTCEEECSSSCCTTCCHHHHHHSCCTTHHHHHHGGGTSSEEE
T ss_pred CCccCHHHHHHHHhcCC--CCeEEEECCCHHHHHhccccCCcccCHHHccCCCcHHHHHHHCChHHHHHHHhcCCCCEEE
Confidence 34578889999887521 2679999999999999999999999997664321 01111111 234489
Q ss_pred EEeCCChh----HHHHHHHHHH----c----CCCc-eEEccccHhhcccc
Q 022540 251 VMCHHGMR----SLQVAQWLQT----Q----GFRR-VFNVSGGIHAYATK 287 (295)
Q Consensus 251 v~C~~g~r----s~~aa~~L~~----~----G~~~-v~~l~GG~~~W~~~ 287 (295)
|||.++.+ +..++..|.+ . ||.+ |++|+||+.+|...
T Consensus 92 vy~~~~~~~~~~a~~~~~~L~~~L~~~~~~~~~~~~V~~L~GG~~aW~~~ 141 (157)
T 1whb_A 92 LLDWFSSAKDLQIGTTLRSLKDALFKWESKTVLRNEPLVLEGGYENWLLC 141 (157)
T ss_dssp EECSSCCGGGCCTTCHHHHHHHTTTTTCSSCCCSSCCEEESSCHHHHHHH
T ss_pred EECCCCCccccccccHHHHHHHHHHHhccccccCCCeEEEcchHHHHHHH
Confidence 99987754 3445556552 2 4543 99999999999864
No 79
>2gwf_A Ubiquitin carboxyl-terminal hydrolase 8; protein-protein complex, E3 ligase, protein ubiquitination, hydrolase, protease, UBL conjugation pathway; 2.30A {Homo sapiens} SCOP: c.46.1.4
Probab=99.58 E-value=6.8e-16 Score=124.50 Aligned_cols=102 Identities=15% Similarity=0.089 Sum_probs=70.3
Q ss_pred cccccchhhhhhccCCCccccceeecCcchhHHhhcCCCCccccCccccCCCC--ccccccC-----------CCCCcEE
Q 022540 184 LQDIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSWG--PDITVKF-----------DPQKDTY 250 (295)
Q Consensus 184 ~~~is~~el~~~L~~~~~~~~~~iiDvR~~~e~~~ghIpgAinip~~~l~~~~--~~~~~~~-----------~~~~~iv 250 (295)
...++++++.+++.+.. .+.+|||||++.||..||||||+|||+..+.... ..+...+ .+...||
T Consensus 19 ~~~is~~~l~~~l~~~~--~~~~liDvR~~~ey~~gHI~gAinip~~~l~~~~~~~~l~~~lp~~~~~l~~~~~~~~~VV 96 (157)
T 2gwf_A 19 SGAITAKELYTMMTDKN--ISLIIMDARRMQDYQDSCILHSLSVPEEAISPGVTASWIEAHLPDDSKDTWKKRGNVEYVV 96 (157)
T ss_dssp CCEECHHHHHHHHHSTT--SCEEEEECSCHHHHHHSCBTTCEECCGGGCCTTCCHHHHHHTSCHHHHHHHHTTTTSSEEE
T ss_pred CCccCHHHHHHHHhcCC--CCeEEEECCCHHHHHhcCccCCcccCHHHcCCCCcHHHHHHHcCHHHHHHHHhcCCCCEEE
Confidence 34588899999887521 2679999999999999999999999998764321 0011111 2234588
Q ss_pred EEeCCChh----HHHHHHHHH----Hc----CCCc-eEEccccHhhcccc
Q 022540 251 VMCHHGMR----SLQVAQWLQ----TQ----GFRR-VFNVSGGIHAYATK 287 (295)
Q Consensus 251 v~C~~g~r----s~~aa~~L~----~~----G~~~-v~~l~GG~~~W~~~ 287 (295)
|||.+|.+ +..++..|. .. ||.+ |++|+||+.+|...
T Consensus 97 vy~~~~~~~~~~a~~~l~~L~~~L~~~~~~~~~~~~V~~L~GG~~aW~~~ 146 (157)
T 2gwf_A 97 LLDWFSSAKDLQIGTTLRSLKDALFKWESKTVLRNEPLVLEGGYENWLLC 146 (157)
T ss_dssp EECSSCCGGGCCTTCHHHHHHHHHHTSCCSSCCSSCCEEETTHHHHHHHH
T ss_pred EEcCCCCccccCcccHHHHHHHHHHhhccccccCCceEEEccHHHHHHHH
Confidence 99987654 233445544 22 4544 99999999999864
No 80
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.46 E-value=3.3e-14 Score=134.26 Aligned_cols=98 Identities=16% Similarity=0.280 Sum_probs=80.9
Q ss_pred hcccccchhhhhhccCCCccccceeecCcchhHHhhcCCCCccccCccc-cCCCCccccccCCCCCcEEEEeCCChhHHH
Q 022540 183 LLQDIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQ-FGSWGPDITVKFDPQKDTYVMCHHGMRSLQ 261 (295)
Q Consensus 183 ~~~~is~~el~~~L~~~~~~~~~~iiDvR~~~e~~~ghIpgAinip~~~-l~~~~~~~~~~~~~~~~ivv~C~~g~rs~~ 261 (295)
....++++++.+.+.+ . +|||+|++.+|..||||||+|+|++. |..+...+ .+++++|||||..|. +..
T Consensus 271 ~~~~is~~~l~~~l~~-----~-~iiD~R~~~~y~~ghIpGA~~i~~~~~~~~~~~~l---~~~~~~vvvy~~~~~-~~~ 340 (474)
T 3tp9_A 271 ERVDLPPERVRAWREG-----G-VVLDVRPADAFAKRHLAGSLNIPWNKSFVTWAGWL---LPADRPIHLLAADAI-APD 340 (474)
T ss_dssp EECCCCGGGHHHHHHT-----S-EEEECSCHHHHHHSEETTCEECCSSTTHHHHHHHH---CCSSSCEEEECCTTT-HHH
T ss_pred CCceeCHHHHHHHhCC-----C-EEEECCChHHHhccCCCCeEEECcchHHHHHHHhc---CCCCCeEEEEECCCc-HHH
Confidence 3556889999999875 3 89999999999999999999999974 43332333 368899999999876 666
Q ss_pred HHHHHHHcCCCceEEccccHhhcccccCC
Q 022540 262 VAQWLQTQGFRRVFNVSGGIHAYATKVDP 290 (295)
Q Consensus 262 aa~~L~~~G~~~v~~l~GG~~~W~~~~~p 290 (295)
++.+|+.+||++|+.+.+|+.+|...+.|
T Consensus 341 ~~~~L~~~G~~~v~~~l~G~~~W~~~g~~ 369 (474)
T 3tp9_A 341 VIRALRSIGIDDVVDWTDPAAVDRAAPDD 369 (474)
T ss_dssp HHHHHHHTTCCCEEEEECGGGGTTCCGGG
T ss_pred HHHHHHHcCCcceEEecCcHHHHHhcccc
Confidence 99999999999999877799999987654
No 81
>3rgc_A Possible periplasmic protein; ppiase, chaperone; 2.30A {Campylobacter jejuni}
Probab=99.41 E-value=1.3e-14 Score=125.95 Aligned_cols=94 Identities=13% Similarity=0.098 Sum_probs=76.0
Q ss_pred cChHhh-hccccCCCCCCCCCCCccEEEeeEEeccchHHHHHHHHHHhcCCCcHHHHHHHhCCCCCccCCCccccccCCC
Q 022540 66 FTSPKA-ASFSSGTEGSSPGGGDREILVQHLLVKEDDLNLLSELQRRVSQGEDLSDLAVEHSICPSKGEGGMLGWVRKGQ 144 (295)
Q Consensus 66 ~~~~e~-~~~~~~~~~~~~~~~~~~~~~~hIl~~~~~~~~a~~~~~~i~~g~~F~~~a~~~S~~~~~~~gG~lg~~~~~~ 144 (295)
|++.|. ++|..+.. .+..+++|+++||++..+ +++++|++|++|+ -||++||+..+.
T Consensus 114 vtd~ei~~yy~~~~~---~f~~~~~v~~~~i~~~~~------~~~~~l~~g~~f~-------------l~g~lg~~~~~~ 171 (252)
T 3rgc_A 114 FSDDGAKKFFEQNKD---KFTFYTQINANIYLSNNP------QTLENIKNTKKTI-------------LKPQNASLNTSN 171 (252)
T ss_dssp CCHHHHHHHHHTCGG---GCCEESEEEEEEEECSCH------HHHHHHHHHCCCC-------------SCCEEEEEETTT
T ss_pred CCHHHHHHHHHhCHH---hcCCCceEEEEEecCCCH------HHHHHHHhCCCcc-------------cccccceecHHh
Confidence 456555 44445543 346678999999998653 3556777888886 278999999999
Q ss_pred CcHHHHHHHHhCCCCccc-cccccceeEEEeeehhhhh
Q 022540 145 LVPEFEEVAFTTPLNKVA-RCKTKFGWHLLQVLSEREA 181 (295)
Q Consensus 145 ~~~~~~~~~~~l~~G~vs-pv~~~~G~~ii~v~~~~~~ 181 (295)
++|+|.+++++|++|++| |+++++|||++++.+.++.
T Consensus 172 l~~~~~~a~~~l~~G~is~pv~t~~G~hiikv~~~~~~ 209 (252)
T 3rgc_A 172 ADPRLLGLLSQIPVGSFSPVLNGKNGYELYEVKSKDGT 209 (252)
T ss_dssp SCHHHHHHHHHSCTTCBCCCBTTTTCEEEEEEEECSCE
T ss_pred cCHHHHHHHHcCCCCCcCCcEEeCCeEEEEEEecccCC
Confidence 999999999999999999 8999999999999987763
No 82
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}
Probab=99.24 E-value=1.2e-11 Score=110.91 Aligned_cols=104 Identities=13% Similarity=0.130 Sum_probs=79.2
Q ss_pred cccchhhhhhccCCCccccceeecCc--------c-hhHH-hhcCCCCccccCccccCCCCcccc---------------
Q 022540 186 DIQPDELHKKMQDPNFHKEAQLIDVR--------E-PEEV-ALSSLPGFQVLPLRQFGSWGPDIT--------------- 240 (295)
Q Consensus 186 ~is~~el~~~L~~~~~~~~~~iiDvR--------~-~~e~-~~ghIpgAinip~~~l~~~~~~~~--------------- 240 (295)
-++++++.++|...+. .++++||++ + ..|| +.||||||++++++.+........
T Consensus 29 LIsp~~l~~ll~~~~~-~rvv~lDasw~lP~~~r~~~~E~~~~~HIPGAv~~Dld~~~d~~~~~ph~LP~~~~f~~~l~~ 107 (327)
T 3utn_X 29 LISPKAFVKLVASEKV-HRIVPVDATWYLPSWKLDNKVDFLTKPRIPNSIFFDIDAISDKKSPYPHMFPTKKVFDDAMSN 107 (327)
T ss_dssp EECHHHHHHHHHHCSS-SCEEEEECCCCCGGGCCCHHHHHHHSCBCTTCEECCTTTSSCTTSSSTTCCCCHHHHHHHHHH
T ss_pred ccCHHHHHHHHhCCCC-CcEEEEEecCCCCCCCCCHHHHHHhhCcCCCCeeeChHHhcCCCCCCCCCCcCHHHHHHHHHH
Confidence 4788999998875321 357889984 3 3466 779999999999886644321111
Q ss_pred ccCCCCCcEEEEeCCCh-hHHHHHHHHHHcCCCceEEccccHhhcccccCCC
Q 022540 241 VKFDPQKDTYVMCHHGM-RSLQVAQWLQTQGFRRVFNVSGGIHAYATKVDPS 291 (295)
Q Consensus 241 ~~~~~~~~ivv~C~~g~-rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~~~p~ 291 (295)
..+.++++||||.+.|. .|++++.+|+..|+++|++|+|| .+|..++.|.
T Consensus 108 lGI~~d~~VVvYD~~~~~~AaR~wW~Lr~~Gh~~V~vLdGg-~aW~~~g~p~ 158 (327)
T 3utn_X 108 LGVQKDDILVVYDRVGNFSSPRCAWTLGVMGHPKVYLLNNF-NQYREFKYPL 158 (327)
T ss_dssp TTCCTTCEEEEECSSSSSSHHHHHHHHHHTTCSEEEEESCH-HHHHHTTCCC
T ss_pred cCCCCCCEEEEEeCCCCcHHHHHHHHHHHcCCCceeecccH-HHHHHhCCCc
Confidence 13468999999998764 57899999999999999999977 8999988875
No 83
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=99.17 E-value=1.4e-11 Score=115.92 Aligned_cols=79 Identities=11% Similarity=0.051 Sum_probs=62.2
Q ss_pred ccceeecCcchhHHhhcCCCCccccCcc-ccCCCCccccccCCCCCcEEEEeCCChhHHHHHHHHHHcCCCceEE-cccc
Q 022540 203 KEAQLIDVREPEEVALSSLPGFQVLPLR-QFGSWGPDITVKFDPQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFN-VSGG 280 (295)
Q Consensus 203 ~~~~iiDvR~~~e~~~ghIpgAinip~~-~l~~~~~~~~~~~~~~~~ivv~C~~g~rs~~aa~~L~~~G~~~v~~-l~GG 280 (295)
++.+|||+|++.+|..||||||+|||+. .+..+..++ ++++++||+||. +.++..++..|+..||++|+. ++|+
T Consensus 295 ~~~~ilD~R~~~~y~~gHIpGAv~ip~~~~~~~~~~~~---~~~~~~vvly~~-~~~a~~a~~~L~~~G~~~v~~~l~g~ 370 (466)
T 3r2u_A 295 TNRLTFDLRSKEAYHGGHIEGTINIPYDKNFINQIGWY---LNYDQEINLIGD-YHLVSKATHTLQLIGYDDIAGYQLPQ 370 (466)
T ss_dssp CCSEEEECSCHHHHHHSCCTTCEECCSSTTHHHHHTTT---CCTTSCEEEESC-HHHHHHHHHHHHTTTCCCEEEEECCC
T ss_pred CCeEEEECCCHHHHhhCCCCCcEECCccHHHHHHHHhc---cCCCCeEEEEEC-CchHHHHHHHhhhhhcccccccccCc
Confidence 4679999999999999999999999997 354443332 478999999999 668999999999999999987 6676
Q ss_pred Hhhcc
Q 022540 281 IHAYA 285 (295)
Q Consensus 281 ~~~W~ 285 (295)
...|.
T Consensus 371 ~~~~~ 375 (466)
T 3r2u_A 371 SKIQT 375 (466)
T ss_dssp -----
T ss_pred ccccH
Confidence 55553
No 84
>2lj4_A Peptidyl-prolyl CIS-trans isomerase/rotamase, PUT; tbpin1; NMR {Trypanosoma brucei}
Probab=98.58 E-value=6.8e-09 Score=78.71 Aligned_cols=79 Identities=9% Similarity=-0.116 Sum_probs=65.2
Q ss_pred ccccccccccccCccchhccCCchhh-hhhccccCCCCCCCcceeEecccccChHhhhccccCCCCCC-CCCCCccEEEe
Q 022540 16 ITQSLIPTLNLSSSSSLSIFQKPASF-ASFYKSLNPASNSNSFHIHIISRSFTSPKAASFSSGTEGSS-PGGGDREILVQ 93 (295)
Q Consensus 16 ~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~-~~~~~~~~~~~ 93 (295)
.++.....++.+++.+..+...|+.+ +.|| |..++.+||+|||+..+.++++|+.++|.+++++++ +...+-.||+-
T Consensus 33 ~~~~a~~~~~~i~~~i~~g~~~F~~lA~~~S-d~~sa~~GGdLG~~~~~~~~~~f~~a~~~l~~GeiS~pv~t~~G~HII 111 (115)
T 2lj4_A 33 TYEDAIKELQKWSQRIASGEVSFEEAASQRS-DCGSYASGGDLGFFSSGEMMKPFEDAVRALKIGDISPIVQTDSGLHII 111 (115)
T ss_dssp CHHHHHHHHHHHHHHHHHTSSCHHHHHHHHC-CSGGGGTTSEEEEEETTSSCHHHHHHHTTSCBTCBCCCEECSSSEEEE
T ss_pred cHHHHHHHHHHHHHHHHcCchhHHHHHHHhC-CCcccccCCccceecCCCCCchHHHHHhcCCCCCCCCcEEeCCeEEEE
Confidence 34455666778888888888899999 9999 557899999999999999999999999999888765 55677778775
Q ss_pred eE
Q 022540 94 HL 95 (295)
Q Consensus 94 hI 95 (295)
..
T Consensus 112 kl 113 (115)
T 2lj4_A 112 KR 113 (115)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 85
>4g2p_A Chaperone SURA; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, pcsep; 1.82A {Salmonella enterica subsp}
Probab=98.31 E-value=5.3e-08 Score=73.21 Aligned_cols=78 Identities=12% Similarity=-0.094 Sum_probs=65.6
Q ss_pred cccccccccCccchhccCCchhh-hhhccccCCCCCCCcceeEecccccChHhhhccccCCCCCC-CCCCCccEEEeeEE
Q 022540 19 SLIPTLNLSSSSSLSIFQKPASF-ASFYKSLNPASNSNSFHIHIISRSFTSPKAASFSSGTEGSS-PGGGDREILVQHLL 96 (295)
Q Consensus 19 ~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~-~~~~~~~~~~~hIl 96 (295)
....+++.+++.+..+..+|+.+ +.||+|+.++.+||++||+..+.++++|+.++|.+++++++ +...+..||+-+++
T Consensus 26 ~a~~~a~~i~~~l~~G~~~F~~lA~~~S~d~~s~~~GG~lG~~~~~~l~~~f~~a~~~l~~Geis~pv~t~~G~hIikv~ 105 (110)
T 4g2p_A 26 QARLKLEEIAADIKSGKTTFAAAAKEYSQDPGSANQGGDLGWATPDIFDPAFRDALTKLHKGQISAPVHSSFGWHLIELL 105 (110)
T ss_dssp HHHHHHHHHHHHHHTTSSCHHHHHHHHCCCTTTGGGTTEEEEECGGGSCHHHHHHHHTCCTTCBCCCEEETTEEEEEEEE
T ss_pred HHHHHHHHHHHHHHcCcccHHHHHHHhCCCccccccccccCeecccccCHHHHHHHHcCCCCCcCccEEECCEEEEEEEE
Confidence 35566777888887776699999 99999999999999999999999999999999999888766 45667777776654
No 86
>3i6c_A Peptidyl-prolyl CIS-trans isomerase NIMA- interacting 1; SBDD, small molecule, ppiase, cell cycle, nucleus, phosphoprotein, rotamase; HET: GIA; 1.30A {Homo sapiens} PDB: 3ik8_A 3ikd_A* 3ikg_A* 3jyj_A* 3kac_A* 1nmw_A
Probab=98.06 E-value=2.4e-07 Score=70.88 Aligned_cols=78 Identities=17% Similarity=0.034 Sum_probs=62.3
Q ss_pred cccccccccccCccchhccCCchhh-hhhccccCCCCCCCcceeEecccccChHhhhccccCCCCCC-CCCCCccEEEee
Q 022540 17 TQSLIPTLNLSSSSSLSIFQKPASF-ASFYKSLNPASNSNSFHIHIISRSFTSPKAASFSSGTEGSS-PGGGDREILVQH 94 (295)
Q Consensus 17 ~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~-~~~~~~~~~~~h 94 (295)
++.....++.+++.+..+..+|+.| ++||++ .++.++|+|||+..+.++++|+.++|.+++++++ +...+..|||-.
T Consensus 42 ~~~A~~~~~~i~~~l~~G~~~F~~lA~~~S~~-~sa~~GGdLG~~~~~~l~~~f~~a~f~l~~GeiS~pv~t~~G~hIi~ 120 (123)
T 3i6c_A 42 QEEALELINGYIQKIKSGEEDFESLASQFSDC-SSAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIIL 120 (123)
T ss_dssp HHHHHHHHHHHHHHHHHTSSCHHHHHHHHCSS-GGGGGTTEEEEEETTTSCHHHHHHHHHSCTTCBCSCEEETTEEEEEE
T ss_pred HHHHHHHHHHHHHHHHcCcccHHHHHHHhCCC-chhhhCCceeeEcCCCCCHHHHHHHHhCCCCCccccEEECCEEEEEE
Confidence 3444555667777887776799999 999976 5778999999999999999999999999887765 456667777655
Q ss_pred E
Q 022540 95 L 95 (295)
Q Consensus 95 I 95 (295)
+
T Consensus 121 v 121 (123)
T 3i6c_A 121 R 121 (123)
T ss_dssp E
T ss_pred E
Confidence 4
No 87
>3gpk_A PPIC-type peptidyl-prolyl CIS-trans isomerase; rotamase,ppiase domain, 11189O3,PSI2., structural genomics; 1.55A {Novosphingobium aromaticivorans}
Probab=98.02 E-value=2.6e-07 Score=69.49 Aligned_cols=91 Identities=8% Similarity=-0.013 Sum_probs=70.3
Q ss_pred ccccCCchhhhhccccccccccccCccchhccCCchhh-hhhccccCCCCCCCcceeEecccccChHhhhccccCCCCCC
Q 022540 4 RASQLASPVLCAITQSLIPTLNLSSSSSLSIFQKPASF-ASFYKSLNPASNSNSFHIHIISRSFTSPKAASFSSGTEGSS 82 (295)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 82 (295)
+.+||-=+.+++.++......+.+++.+..+ .+|+.+ ++||+++ ++.++|+|||+....++++|+.++|.+++++++
T Consensus 9 ~v~hIli~~~~~~~~~a~~~A~~i~~~l~~G-~~F~~lA~~~S~d~-sa~~GGdlG~~~~~~l~~~f~~a~~~l~~GeiS 86 (112)
T 3gpk_A 9 RIGEIFLAATEENKPQVFANAEKIVEQLKQG-GSFVAYARQYSEAS-TAAVGGDLGWIRLAQLPTELATTAASMGPGQLA 86 (112)
T ss_dssp EEEEEEEECCGGGHHHHHHHHHHHHHHHHTT-CCHHHHHHHHCCST-TGGGTTEEEEECGGGSCHHHHHHHHHCCTTCEE
T ss_pred EEEEEEEeCChhhHHHHHHHHHHHHHHHHCC-CCHHHHHHHhCCCc-chhcCcccceEcccccCHHHHHHHHhCCCCCcc
Confidence 4455543344455666677778888888766 599999 9999995 788999999999999999999999999887765
Q ss_pred -CCCCCccEEEeeEE
Q 022540 83 -PGGGDREILVQHLL 96 (295)
Q Consensus 83 -~~~~~~~~~~~hIl 96 (295)
+...+..|++-.+.
T Consensus 87 ~pv~t~~G~hIikv~ 101 (112)
T 3gpk_A 87 GPVEIRGGFSILYLI 101 (112)
T ss_dssp EEEEETTEEEEEEEE
T ss_pred ceEEECCEEEEEEEE
Confidence 45666677766554
No 88
>3tc5_A Peptidyl-prolyl CIS-trans isomerase NIMA-interact; PIN1 mutant (R14A), oncogenic transformation, small molecule cycle, rotamase, phosphoprotein; HET: 3T5 P6G; 1.40A {Homo sapiens} PDB: 2itk_A* 2q5a_A* 2xp3_A* 2xp4_A* 2xp5_A* 2xp7_A* 2xp8_A* 2xp9_A* 2xpa_A* 2xpb_A* 3kab_A* 3kag_A* 3kah_A* 3kai_A* 3kce_A* 3ntp_A* 3odk_A* 3oob_A* 2zr6_A* 1f8a_B* ...
Probab=97.89 E-value=8.6e-07 Score=71.42 Aligned_cols=78 Identities=17% Similarity=0.034 Sum_probs=62.1
Q ss_pred cccccccccccCccchhccCCchhh-hhhccccCCCCCCCcceeEecccccChHhhhccccCCCCCC-CCCCCccEEEee
Q 022540 17 TQSLIPTLNLSSSSSLSIFQKPASF-ASFYKSLNPASNSNSFHIHIISRSFTSPKAASFSSGTEGSS-PGGGDREILVQH 94 (295)
Q Consensus 17 ~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~-~~~~~~~~~~~h 94 (295)
++.....++.+++.+..+..+|+.| ++||++ .++.+||+|||+..+.++++|+.++|.+++++++ +......|||-.
T Consensus 85 ~~~A~~~~~~i~~~l~~g~~~F~~lA~~~Sd~-~sa~~GGdLG~~~~~~l~~~f~~a~f~l~~GeiS~pv~t~~G~hIi~ 163 (166)
T 3tc5_A 85 KEEALELINGYIQKIKSGEEDFESLASQFSDC-SSAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIIL 163 (166)
T ss_dssp HHHHHHHHHHHHHHHHHTSSCHHHHHHHHCSS-GGGGGTTEEEEECTTSSCHHHHHHHHHSCTTCBCCCEEETTEEEEEE
T ss_pred HHHHHHHHHHHHHHHHcCccCHHHHHHHhCcc-cHHhcCCccceecccccCHHHHHHHHhCCCCCCcccEEECCEEEEEE
Confidence 3445555667777887776799999 999965 6788999999999999999999999999888765 455666776654
Q ss_pred E
Q 022540 95 L 95 (295)
Q Consensus 95 I 95 (295)
+
T Consensus 164 v 164 (166)
T 3tc5_A 164 R 164 (166)
T ss_dssp E
T ss_pred E
Confidence 4
No 89
>2pv1_A Chaperone SURA; surviVal protein A, peptidyl-prolyl CIS-trans isomerase domain, peptide, complex; 1.30A {Escherichia coli} SCOP: d.26.1.1 PDB: 2pv2_A
Probab=97.74 E-value=2.8e-06 Score=62.82 Aligned_cols=81 Identities=6% Similarity=-0.119 Sum_probs=63.5
Q ss_pred hhhccccccccccccCccchhccCCchhh-hhhccccCCCCCCCcceeEecccccChHhhhccccCCCCCC-CCCCCccE
Q 022540 13 LCAITQSLIPTLNLSSSSSLSIFQKPASF-ASFYKSLNPASNSNSFHIHIISRSFTSPKAASFSSGTEGSS-PGGGDREI 90 (295)
Q Consensus 13 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~-~~~~~~~~ 90 (295)
+++.++......+.+++.+..+ .+|+.+ +.||+++ ++.++|++||+....++++|+.++|.++.++++ +...+..|
T Consensus 17 ~~~~~~~a~~~a~~i~~~l~~g-~~F~~lA~~~S~~~-s~~~gG~lg~~~~~~l~~~f~~a~~~l~~G~is~pv~t~~G~ 94 (103)
T 2pv1_A 17 TSDQVNEAESQARAIVDQARNG-ADFGKLAIAHSADQ-QALNGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGF 94 (103)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTT-CCHHHHHHHHCCST-TGGGTTEEEEECGGGSCHHHHHHTTTCCTTCEEEEEEETTEE
T ss_pred CHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHHhCCCc-ccccCCccceEchhhcCHHHHHHHHcCCCCCeeccEEECCEE
Confidence 4555555666677777777665 589999 9999998 678999999999999999999999999887654 44556666
Q ss_pred EEeeE
Q 022540 91 LVQHL 95 (295)
Q Consensus 91 ~~~hI 95 (295)
|+-.+
T Consensus 95 hii~v 99 (103)
T 2pv1_A 95 HILKV 99 (103)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 66544
No 90
>2jzv_A Foldase protein PRSA; ppiase, parvulin, proline isomerase, lipoprotein, membrane, palmitate, rotamase; NMR {Staphylococcus aureus}
Probab=97.73 E-value=2.5e-06 Score=64.05 Aligned_cols=76 Identities=7% Similarity=-0.140 Sum_probs=60.8
Q ss_pred ccccccccCccchhccCCchhh-hhhccccCCCCCCCcceeEecccccChHhhhccccCCCCCC-CCCCCccEEEeeE
Q 022540 20 LIPTLNLSSSSSLSIFQKPASF-ASFYKSLNPASNSNSFHIHIISRSFTSPKAASFSSGTEGSS-PGGGDREILVQHL 95 (295)
Q Consensus 20 ~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~-~~~~~~~~~~~hI 95 (295)
.....+.+++.+..+..+|+.+ ++||+++.++.++|++||+....++++|+.++|.++.++++ +...+..||+-++
T Consensus 32 ~~~~a~~i~~~l~~g~~~F~~lA~~~S~d~~s~~~gG~lG~~~~~~l~~~f~~a~~~l~~G~is~pv~t~~G~hIi~v 109 (111)
T 2jzv_A 32 AKQKAEEIQKEVSKDPSKFGEIAKKESMDTGSAKKDGELGYVLKGQTDKDFEKALFKLKDGEVSEVVKSSFGYHIIKA 109 (111)
T ss_dssp HHHHHHHHHHHHHSCTTSHHHHHHHHCSCHHHHTTTTEEEEEETTSSCHHHHHHHHTCCTTCBCCCEEETTEEEEEEE
T ss_pred HHHHHHHHHHHHHcCcccHHHHHHHHCCCcchhhhCCccceecCCcccHHHHHHHHhCCCCCcCccEEECCEEEEEEE
Confidence 3445566777776664699999 99999998899999999999999999999999999887664 4555666665443
No 91
>1zk6_A Foldase protein PRSA; alpha/beta structure, isomerase; NMR {Bacillus subtilis}
Probab=97.64 E-value=1.4e-05 Score=57.84 Aligned_cols=70 Identities=11% Similarity=-0.019 Sum_probs=56.6
Q ss_pred ccccCccchhccCCchhh-hhhccccCCCCCCCcceeEe-cccccChHhhhccccCCCCCC-CCCCCccEEEeeE
Q 022540 24 LNLSSSSSLSIFQKPASF-ASFYKSLNPASNSNSFHIHI-ISRSFTSPKAASFSSGTEGSS-PGGGDREILVQHL 95 (295)
Q Consensus 24 l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~-~~~~~~~~~~~hI 95 (295)
.+.+++.+..+ .+|+.+ ++||+++ ++.++|++||+. ...+.++|+.++|.+++++++ +...+..||+-.+
T Consensus 18 A~~i~~~l~~g-~~F~~lA~~~S~~~-s~~~gG~lg~~~~~~~l~~~f~~a~~~l~~G~is~pv~t~~G~hIi~v 90 (93)
T 1zk6_A 18 AEEVEKKLKKG-EKFEDLAKEYSTDS-SASKGGDLGWFAKEGQMDETFSKAAFKLKTGEVSDPVKTQYGYHIIKK 90 (93)
T ss_dssp HHHHHHHHHHT-CCHHHHHHHHCCSG-GGGGTTEEEEECTTTSSCTTHHHHHHHSCTTCBCCCEECSSCEEEEEE
T ss_pred HHHHHHHHHCC-CCHHHHHHHhCCCc-hhhhCCeeeeecccccCCHHHHHHHHcCCCCCccceEEECCEEEEEEE
Confidence 34555666665 499999 9999999 789999999999 999999999999999887765 5566667776554
No 92
>1yw5_A Peptidyl prolyl CIS/trans isomerase; WW-domain, ppiase domain, ordered linker; 1.60A {Candida albicans}
Probab=97.64 E-value=3.6e-06 Score=68.62 Aligned_cols=78 Identities=10% Similarity=-0.034 Sum_probs=61.1
Q ss_pred cccccccccccCccchhccCCchhh-hhhccccCCCCCCCcceeEecccccChHhhhccccCCCCCC-CCCCCccEEEee
Q 022540 17 TQSLIPTLNLSSSSSLSIFQKPASF-ASFYKSLNPASNSNSFHIHIISRSFTSPKAASFSSGTEGSS-PGGGDREILVQH 94 (295)
Q Consensus 17 ~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~-~~~~~~~~~~~h 94 (295)
++.....++.+++.+..+...|+.| +.||+++ ++.+||+|||+..+.++++|+.++|.+++++++ +...+..+||-.
T Consensus 96 ~~~A~~~~~~i~~~l~~G~~~F~~lA~~~S~~~-sa~~GGdLG~~~~~~l~~~f~~a~f~L~~GeiS~pv~t~~G~hIik 174 (177)
T 1yw5_A 96 RDESIQILKKHLERILSGEVKLSELANTESDCS-SHDRGGDLGFFSKGQMQPPFEEAAFNLHVGEVSNIIETNSGVHILQ 174 (177)
T ss_dssp HHHHHHHHHHHHHHHHHTSSCHHHHHHHHCCSG-GGGGTTEEEEECTTSSCHHHHHHHHTSCTTCBCCCEEETTEEEEEE
T ss_pred HHHHHHHHHHHHHHHHcCchhHHHHHHHhCCCc-chhcCCccceecccccCHHHHHHHHcCCCCCcCCeEEECCEEEEEE
Confidence 4444455666777777766689999 9999874 688999999999999999999999999888764 455666676654
Q ss_pred E
Q 022540 95 L 95 (295)
Q Consensus 95 I 95 (295)
+
T Consensus 175 v 175 (177)
T 1yw5_A 175 R 175 (177)
T ss_dssp E
T ss_pred E
Confidence 4
No 93
>1j6y_A Peptidyl-prolyl CIS-trans isomerase; parvulin, PIN1, phosphorylation; NMR {Arabidopsis thaliana} SCOP: d.26.1.1
Probab=97.60 E-value=2.7e-06 Score=66.50 Aligned_cols=78 Identities=8% Similarity=-0.026 Sum_probs=61.1
Q ss_pred hhccccccccccccCccchhccCCchhh-hhhccccCCCCCCCcceeEecccccChHhhhccccCCCCCC-CCCCCccEE
Q 022540 14 CAITQSLIPTLNLSSSSSLSIFQKPASF-ASFYKSLNPASNSNSFHIHIISRSFTSPKAASFSSGTEGSS-PGGGDREIL 91 (295)
Q Consensus 14 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~-~~~~~~~~~ 91 (295)
++.++.....++.+++.+..+...|+.+ ++||+++ ++.++|+|||+....++++|+.++|.+++++++ +...+..||
T Consensus 55 ~~~~~~A~~~a~~i~~~l~~G~~~F~~lA~~~S~~~-sa~~GGdLG~~~~~~l~~~f~~a~~~l~~GeiS~pv~t~~G~h 133 (139)
T 1j6y_A 55 TTTREAAVEQLKSIREDIVSGKANFEEVATRVSDCS-SAKRGGDLGSFGRGQMQKPFEEATYALKVGDISDIVDTDSGVH 133 (139)
T ss_dssp CCCHHHHHHHHHHHHHHHHSSCCCCHHHHHHSSCHH-HHHTCSEEEECSSSSSCTHHHHHHHHCCSSSCCSCEEETTEEE
T ss_pred hHHHHHHHHHHHHHHHHHHcCcccHHHHHHHhccCc-hhhcCCeeeeecccccCHHHHHHHHcCCCCCccccEEECCEEE
Confidence 4455566666777888887766679999 9999875 677999999999999999999999999887664 444555555
Q ss_pred E
Q 022540 92 V 92 (295)
Q Consensus 92 ~ 92 (295)
|
T Consensus 134 I 134 (139)
T 1j6y_A 134 I 134 (139)
T ss_dssp C
T ss_pred E
Confidence 4
No 94
>2rqs_A Parvulin-like peptidyl-prolyl isomerase; CIS/trans isomerisation, cenarcheaum symbiosum, low temperat NIMA-kinase, PIN1, cell cycle; NMR {Cenarchaeum symbiosum}
Probab=97.57 E-value=1.5e-05 Score=58.27 Aligned_cols=70 Identities=11% Similarity=-0.043 Sum_probs=56.8
Q ss_pred cccCccchhccCCchhh-hhhccccCCCCCCCcceeEecccccChHhhhccccCCCCCC-CCCCCccEEEeeE
Q 022540 25 NLSSSSSLSIFQKPASF-ASFYKSLNPASNSNSFHIHIISRSFTSPKAASFSSGTEGSS-PGGGDREILVQHL 95 (295)
Q Consensus 25 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~-~~~~~~~~~~~hI 95 (295)
+.+++.+..+ .+|+.+ ++||+|..++.++|++||+....+.++|+.++|.++.++++ +...+..||+-++
T Consensus 24 ~~i~~~l~~g-~~F~~lA~~~S~d~~s~~~GG~lG~~~~~~l~~~f~~a~~~l~~G~is~pv~t~~G~hIi~v 95 (97)
T 2rqs_A 24 LAVQERLKAG-EKFGKLAKELSIDGGSAKRDGSLGYFGRGKMVKPFEDAAFRLQVGEVSEPVKSEFGYHVIKR 95 (97)
T ss_dssp HHHHHHHTTT-CCHHHHHHHTCCCCGGGGGTTEEEEECTTSSCHHHHHHHTTCTTSCBCCCEECSSCEEEEEE
T ss_pred HHHHHHHHCC-CCHHHHHHHhCCCCcchhcCceeeeEcCCCCCHHHHHHHHcCCCCCccccEEECCEEEEEEE
Confidence 4455555555 489999 99999999999999999999999999999999999887765 5566667776544
No 95
>3ui4_A Peptidyl-prolyl CIS-trans isomerase NIMA-interact; peptidyl-prolyl-isomerase; 0.80A {Homo sapiens} SCOP: d.26.1.1 PDB: 3ui5_A 3ui6_A 1fjd_A 1eq3_A
Probab=97.56 E-value=1.5e-05 Score=58.62 Aligned_cols=67 Identities=10% Similarity=0.003 Sum_probs=52.4
Q ss_pred ccCccchhccCCchhh-hhhccccCCCCCCCcceeEecccccChHhhhccccCCCCCC-------CCCCCccEEEeeE
Q 022540 26 LSSSSSLSIFQKPASF-ASFYKSLNPASNSNSFHIHIISRSFTSPKAASFSSGTEGSS-------PGGGDREILVQHL 95 (295)
Q Consensus 26 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~-------~~~~~~~~~~~hI 95 (295)
.+.+.+..+ .+|+.+ ++||+|. +.++|++||+....++++|+.++|.++.++++ +...+..||+-.+
T Consensus 23 ~i~~~l~~G-~~F~~lA~~~S~d~--a~~GGdlG~~~~~~l~~~f~~a~~~l~~G~vs~~~~~~~pv~t~~G~hIikv 97 (101)
T 3ui4_A 23 EAMEKLKSG-MRFNEVAAQYSEDK--ARQGGDLGWMTRGSMVGPFQEAAFALPVSGMDKPVFTDPPVKTKFGYHIIMV 97 (101)
T ss_dssp HHHHHHHTT-CCHHHHHHHHCSSS--GGGTTEEEEEETTSSCHHHHHHHHTSCCCBTTBCCBCSSCEEETTEEEEEEE
T ss_pred HHHHHHHCC-CCHHHHHHHhCcCc--hhcCCceeeEcCCCCCHHHHHHHHhCCCCCCccCcccCCcEEECCEEEEEEE
Confidence 344455444 599999 9999984 67899999999999999999999999887765 3455666666554
No 96
>2kgj_A Peptidyl-prolyl CIS-trans isomerase D; prolyl isomerase, parvulin, cell inner membrane, cell membrane, membrane, rotamase, stress response; NMR {Escherichia coli}
Probab=97.55 E-value=6.5e-06 Score=60.76 Aligned_cols=73 Identities=11% Similarity=-0.108 Sum_probs=57.3
Q ss_pred ccccccCccchhccCCchhh-hhhccccCCCCCCCcceeEecccccChHhhhccccCCCCCC-CCCCCccEEEeeEE
Q 022540 22 PTLNLSSSSSLSIFQKPASF-ASFYKSLNPASNSNSFHIHIISRSFTSPKAASFSSGTEGSS-PGGGDREILVQHLL 96 (295)
Q Consensus 22 ~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~-~~~~~~~~~~~hIl 96 (295)
.+.+++++.+..+ .+|+.+ ++||+++.++.++|+|||+..+.++++|+.++|. ++++++ +...+..|++-.+.
T Consensus 17 ~~A~~i~~~l~~G-~~F~~lA~~~S~d~~sa~~GGdlG~~~~~~l~~~f~~a~~~-~~GeiS~pv~t~~G~hIikv~ 91 (102)
T 2kgj_A 17 DEAKAVLDELNKG-GDFAALAKEKSADIISARNGGDMGWLEDATIPDELKNAGLK-EKGQLSGVIKSSVGFLIVRLD 91 (102)
T ss_dssp HHHHHHHHHHHHT-SCHHHHHHHTCTTHHHHTTTSEEEEEETTCCCHHHHTTCCC-STTCEEEEEEETTEEEEEEEE
T ss_pred HHHHHHHHHHHCC-CCHHHHHHHhCCCchhhhcCCccceecccccCHHHHHHHhc-CCCCccccEEECCEEEEEEEe
Confidence 3344556666555 489999 9999999889999999999999999999999999 887654 44555666665543
No 97
>1jns_A Peptidyl-prolyl CIS-trans isomerase C; alpha-beta sandwich, CIS peptide bond; NMR {Escherichia coli} SCOP: d.26.1.1 PDB: 1jnt_A
Probab=97.54 E-value=1.4e-05 Score=57.69 Aligned_cols=70 Identities=4% Similarity=-0.146 Sum_probs=55.5
Q ss_pred ccccCccchhccCCchhh-hhhccccCCCCCCCcceeEecccccChHhhhccccCCCCCC-CCCCCccEEEeeE
Q 022540 24 LNLSSSSSLSIFQKPASF-ASFYKSLNPASNSNSFHIHIISRSFTSPKAASFSSGTEGSS-PGGGDREILVQHL 95 (295)
Q Consensus 24 l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~-~~~~~~~~~~~hI 95 (295)
.+.+++.+..+. +|+.+ ++||+++ ++.++|++||+....++++|+.++|.+++++++ +...+..||+-.+
T Consensus 17 A~~i~~~l~~g~-~F~~lA~~~S~~~-s~~~gGdlg~~~~~~l~~~f~~a~~~l~~G~is~pv~t~~G~hIi~v 88 (92)
T 1jns_A 17 ALDLLEQIKNGA-DFGKLAKKHSICP-SGKRGGDLGEFRQGQMVPAFDKVVFSCPVLEPTGPLHTQFGYHIIKV 88 (92)
T ss_dssp HHHHHHHHHHTC-CHHHHHHHHHCST-TTTTGGGCCEEETTSSCHHHHHHHHHSCTTCCEEEEEETTEEEEEEE
T ss_pred HHHHHHHHHCCC-CHHHHHHHhCCCc-chhcCCeeeEEcCcccCHHHHHHHHhCCCCCcCCcEEECCEEEEEEE
Confidence 345556665554 89999 9999886 678999999999999999999999999887765 4556666766554
No 98
>2f46_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.41A {Neisseria meningitidis Z2491}
Probab=97.31 E-value=0.00016 Score=57.34 Aligned_cols=81 Identities=14% Similarity=0.172 Sum_probs=48.2
Q ss_pred ccchhhhhhccCCCccccceeecCcchhH------------Hhhc-CCCCccccCccccCCCCcc----ccccC-CCCCc
Q 022540 187 IQPDELHKKMQDPNFHKEAQLIDVREPEE------------VALS-SLPGFQVLPLRQFGSWGPD----ITVKF-DPQKD 248 (295)
Q Consensus 187 is~~el~~~L~~~~~~~~~~iiDvR~~~e------------~~~g-hIpgAinip~~~l~~~~~~----~~~~~-~~~~~ 248 (295)
++.+++..+.+. .-..|||+|++.| +..+ +|.|.+|+|+... ..... +...+ ..+.|
T Consensus 30 ~~~~d~~~L~~~----Gi~~IIdlR~~~E~~~~p~~~~~~~~~~~~gi~~~~~iPv~~~-~~~~~~~~~~~~~l~~~~~p 104 (156)
T 2f46_A 30 LTKADAEQIAQL----GIKTIICNRPDREEESQPDFAQIKQWLEQAGVTGFHHQPVTAR-DIQKHDVETFRQLIGQAEYP 104 (156)
T ss_dssp CCGGGHHHHHHH----TCCEEEECSCTTSSTTCCCHHHHHHHHGGGTCCEEEECCCCTT-TCCHHHHHHHHHHHHTSCSS
T ss_pred CCHHHHHHHHHC----CCCEEEECCCCccccCCCcHHHHHHHHHHCCCHhheECccCCC-CCCHHHHHHHHHHHHhCCCC
Confidence 345555554332 1237999997655 3334 5988999998642 11111 11112 35789
Q ss_pred EEEEeCCChhHHHHHHH-HHHcCCC
Q 022540 249 TYVMCHHGMRSLQVAQW-LQTQGFR 272 (295)
Q Consensus 249 ivv~C~~g~rs~~aa~~-L~~~G~~ 272 (295)
|+|||.+|.|+..++.. |...|.+
T Consensus 105 VlvHC~sG~Rs~~l~al~l~~~g~~ 129 (156)
T 2f46_A 105 VLAYCRTGTRCSLLWGFRRAAEGMP 129 (156)
T ss_dssp EEEECSSSHHHHHHHHHHHHHTTCC
T ss_pred EEEECCCCCCHHHHHHHHHHHcCCC
Confidence 99999999998755444 3445654
No 99
>3nrk_A LIC12922; NC domain, parvulin domain, SURA homology, probable chaperon unknown function; 3.10A {Leptospira interrogans serovar copenhaorganism_taxid}
Probab=96.72 E-value=0.00013 Score=65.09 Aligned_cols=76 Identities=9% Similarity=-0.083 Sum_probs=60.6
Q ss_pred ccccccccCcc-chhccCCchhh-hhhccccCCCCCCCcceeEeccccc---ChHhhhccccCCCCCC-CCCCCc-cEEE
Q 022540 20 LIPTLNLSSSS-SLSIFQKPASF-ASFYKSLNPASNSNSFHIHIISRSF---TSPKAASFSSGTEGSS-PGGGDR-EILV 92 (295)
Q Consensus 20 ~~~~l~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~e~~~~~~~~~~~~-~~~~~~-~~~~ 92 (295)
....++.+++. +.. ..+|+.+ +.||.++.++.+||.+||+..+.++ ++|+.++|.+++++++ +...+. .||+
T Consensus 180 ~~~~a~~i~~~~l~~-g~~F~~lA~~~S~d~~s~~~gG~lg~~~~~~l~~~~~~~~~a~~~l~~Geis~pv~t~~~G~hI 258 (325)
T 3nrk_A 180 LYKEVSEIRKSILAD-PSSFALIAGSPRNDPALRARRGMVEWISSFDLYKYSKITATIAAPLPNGGVSEVFRDERKRYCI 258 (325)
T ss_dssp HHHHHHHHHHHHHHC-TTHHHHHHHSTTSCHHHHHTTTEEEEEEHHHHHHHCHHHHHHHTTCCTTCBCCCEECTTSCEEE
T ss_pred HHHHHHHHHHHHHhC-CCCHHHHHHHhCCCccccccCCcccccccccccccCHHHHHHHHcCCCCCCCceEEeCCCeEEE
Confidence 34445566666 544 4599999 9999999998999999999999999 9999999999888766 455566 6777
Q ss_pred eeEE
Q 022540 93 QHLL 96 (295)
Q Consensus 93 ~hIl 96 (295)
-.+.
T Consensus 259 ikv~ 262 (325)
T 3nrk_A 259 LKIE 262 (325)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 6654
No 100
>3rfw_A Cell-binding factor 2; SURA-like, chaperone; 2.20A {Campylobacter jejuni}
Probab=96.36 E-value=0.00079 Score=57.60 Aligned_cols=63 Identities=10% Similarity=-0.085 Sum_probs=54.0
Q ss_pred CCchhh-hhhccccCCCCCCCcceeEecccccChHhhhccccCCCCCC--CCCCCccEEEeeEEec
Q 022540 36 QKPASF-ASFYKSLNPASNSNSFHIHIISRSFTSPKAASFSSGTEGSS--PGGGDREILVQHLLVK 98 (295)
Q Consensus 36 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~--~~~~~~~~~~~hIl~~ 98 (295)
.+|+.+ +.||.++.+..+||++||+..+.++++|+.++|.+++++++ +...+..||+-.+.=.
T Consensus 143 ~~F~~lA~~~S~~~~~~~~gGdlg~~~~~~l~~~f~~a~~~l~~G~is~~pv~t~~G~hii~v~~~ 208 (252)
T 3rfw_A 143 AKFSELAKEKSIDPGSKNQGGELGWFDQSTMVKPFTDAAFALKNGTITTTPVKTNFGYHVILKENS 208 (252)
T ss_dssp HHHHHHHHHHCCCTTTGGGTTEEEEECSSSSCHHHHHHHHHSCTTEECSSCEEETTEEEEEEEEEE
T ss_pred ccHHHHHHHhCCCCchhhcCCcccccccccccHHHHHHHHcCCCCCccCceEEECCEEEEEEEEEe
Confidence 489999 99999999988899999999999999999999999888765 5567777877766544
No 101
>1v8c_A MOAD related protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, protein binding; 1.60A {Thermus thermophilus} SCOP: d.15.3.1 d.129.5.1
Probab=87.49 E-value=0.048 Score=43.52 Aligned_cols=26 Identities=19% Similarity=0.281 Sum_probs=23.0
Q ss_pred ceeecCcchhHHhhcCCCCccccCccccCC
Q 022540 205 AQLIDVREPEEVALSSLPGFQVLPLRQFGS 234 (295)
Q Consensus 205 ~~iiDvR~~~e~~~ghIpgAinip~~~l~~ 234 (295)
..+||||++.||. |||+|||...+..
T Consensus 122 ~~liDvRe~~E~~----pgA~~iprg~lE~ 147 (168)
T 1v8c_A 122 GAVVRFREVEPLK----VGSLSIPQLRVEV 147 (168)
T ss_dssp TEEEEEEEEEEEE----ETTEEEEEEEEEE
T ss_pred eEEEECCChhhcC----CCCEEcChhHHHH
Confidence 4899999999999 9999999987643
No 102
>4erc_A Dual specificity protein phosphatase 23; alpha beta, phosphatase(hydrolase), hydrolase; 1.15A {Homo sapiens} PDB: 2img_A
Probab=84.81 E-value=0.63 Score=35.45 Aligned_cols=67 Identities=24% Similarity=0.368 Sum_probs=36.4
Q ss_pred eeecCcchhHHhhcCCCC--ccccCccccCCCCcc----c---c-ccCCCCCcEEEEeCCCh-hHH-HHHHHH-HHcCCC
Q 022540 206 QLIDVREPEEVALSSLPG--FQVLPLRQFGSWGPD----I---T-VKFDPQKDTYVMCHHGM-RSL-QVAQWL-QTQGFR 272 (295)
Q Consensus 206 ~iiDvR~~~e~~~ghIpg--Ainip~~~l~~~~~~----~---~-~~~~~~~~ivv~C~~g~-rs~-~aa~~L-~~~G~~ 272 (295)
.|+|+|+..+......+| -+++|+......... . + ..+..+.+|+|+|..|. ||. .++..| ...|.+
T Consensus 38 ~Vi~l~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~i~~~~~~~~~vlVHC~~G~~Rsg~~~a~~l~~~~~~~ 117 (150)
T 4erc_A 38 HLVSLTERGPPHSDSCPGLTLHRLRIPDFCPPAPDQIDRFVQIVDEANARGEAVGVHCALGFGRTGTMLACYLVKERGLA 117 (150)
T ss_dssp EEEECSSSCCTTGGGCTTSEEEECCCCTTSCCCHHHHHHHHHHHHHHHHTTCEEEEECSSSSHHHHHHHHHHHHHHHTCC
T ss_pred EEEEcCCCCCCcccccCCceEEEEecCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHcCCC
Confidence 799999876543333344 234555433211111 0 1 11135689999999885 876 444434 446653
No 103
>2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual specicity protein phosphatase 23, DUS23_human, malate, structural genomics, PSI; 1.93A {Homo sapiens}
Probab=74.30 E-value=1.8 Score=32.72 Aligned_cols=67 Identities=24% Similarity=0.360 Sum_probs=34.6
Q ss_pred eeecCcchhHHhhcCCCC--ccccCccccCCCCcc----cc----ccCCCCCcEEEEeCCCh-hHHHH-HHHHHHc-CCC
Q 022540 206 QLIDVREPEEVALSSLPG--FQVLPLRQFGSWGPD----IT----VKFDPQKDTYVMCHHGM-RSLQV-AQWLQTQ-GFR 272 (295)
Q Consensus 206 ~iiDvR~~~e~~~ghIpg--Ainip~~~l~~~~~~----~~----~~~~~~~~ivv~C~~g~-rs~~a-a~~L~~~-G~~ 272 (295)
.|||+++..|+....+++ -+++|+......... .. ..+..+.+|+|+|..|. ||..+ +..|... |.+
T Consensus 39 ~Vv~l~~~~e~~~~~~~~~~~~~~~~~d~~~p~~~~~~~~~~~i~~~~~~~~~vlVHC~aG~~Rsg~~~~~~l~~~~~~~ 118 (151)
T 2img_A 39 HLVSLTERGPPHSDSCPGLTLHRLRIPDFCPPAPDQIDRFVQIVDEANARGEAVGVHCALGFGRTGTMLACYLVKERGLA 118 (151)
T ss_dssp EEEECSSSCCTTGGGCTTSEEEECCCCTTCCCCHHHHHHHHHHHHHHHHTTCEEEEECSSSSSHHHHHHHHHHHHHHCCC
T ss_pred EEEECCCCCCCCHHHHhhCCeEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCcEEEECCCCCChHHHHHHHHHHHHhCcC
Confidence 688888775543322322 345665432211110 01 11135789999999874 76543 3444433 653
No 104
>2nt2_A Protein phosphatase slingshot homolog 2; alpha/beta hydrolase; 2.10A {Homo sapiens}
Probab=69.90 E-value=3.8 Score=30.89 Aligned_cols=28 Identities=25% Similarity=0.288 Sum_probs=19.6
Q ss_pred CCCcEEEEeCCC-hhHHH-H-HHHHHHcCCC
Q 022540 245 PQKDTYVMCHHG-MRSLQ-V-AQWLQTQGFR 272 (295)
Q Consensus 245 ~~~~ivv~C~~g-~rs~~-a-a~~L~~~G~~ 272 (295)
.+.+|+|+|..| .||.. + +..+...|++
T Consensus 80 ~~~~VlVHC~~G~~RS~~~v~ayLm~~~~~~ 110 (145)
T 2nt2_A 80 HGSKCLVHSKMGVSRSASTVIAYAMKEYGWN 110 (145)
T ss_dssp TTCEEEEECSSSSSHHHHHHHHHHHHHHCCC
T ss_pred cCCeEEEECCCCCchHHHHHHHHHHHHhCCC
Confidence 568999999988 78853 3 4444556653
No 105
>2hcm_A Dual specificity protein phosphatase; structural genomics, PSI, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Mus musculus}
Probab=68.43 E-value=5 Score=31.00 Aligned_cols=29 Identities=28% Similarity=0.453 Sum_probs=20.3
Q ss_pred CCCCcEEEEeCCC-hhHHHH--HHHHHHcCCC
Q 022540 244 DPQKDTYVMCHHG-MRSLQV--AQWLQTQGFR 272 (295)
Q Consensus 244 ~~~~~ivv~C~~g-~rs~~a--a~~L~~~G~~ 272 (295)
..+.+|+|+|..| .||..+ +..+...|++
T Consensus 87 ~~~~~VlVHC~aG~~RSg~~~~ayLm~~~~~~ 118 (164)
T 2hcm_A 87 RDGGSCLVYCKNGRSRSAAVCTAYLMRHRGHS 118 (164)
T ss_dssp HTTCEEEEEESSSSHHHHHHHHHHHHHHSCCC
T ss_pred HcCCEEEEECCCCCchHHHHHHHHHHHHhCCC
Confidence 3578999999988 787643 3445556653
No 106
>2e0t_A Dual specificity phosphatase 26; conserved hypothetical protein, structural genomics, NPPSFA, project on protein structural and functional analyses; 1.67A {Homo sapiens}
Probab=67.24 E-value=5.5 Score=30.14 Aligned_cols=28 Identities=25% Similarity=0.331 Sum_probs=20.0
Q ss_pred CCCcEEEEeCCC-hhHH-HHHH-HHHHcCCC
Q 022540 245 PQKDTYVMCHHG-MRSL-QVAQ-WLQTQGFR 272 (295)
Q Consensus 245 ~~~~ivv~C~~g-~rs~-~aa~-~L~~~G~~ 272 (295)
.+.+|+|+|..| .||. .++. .+...|++
T Consensus 84 ~~~~vlVHC~aG~~RSg~~~~ayl~~~~~~~ 114 (151)
T 2e0t_A 84 PGGKILVHCAVGVSRSATLVLAYLMLYHHLT 114 (151)
T ss_dssp TTCCEEEECSSSSHHHHHHHHHHHHHHSCCC
T ss_pred CCCcEEEECCCCCChHHHHHHHHHHHHcCCC
Confidence 578999999988 7877 4433 44556754
No 107
>2r0b_A Serine/threonine/tyrosine-interacting protein; structural genomics, phosphatase, PSI-2, protein structure initiative; 1.60A {Homo sapiens}
Probab=65.81 E-value=5.3 Score=30.33 Aligned_cols=29 Identities=28% Similarity=0.297 Sum_probs=19.9
Q ss_pred CCCCcEEEEeCCC-hhHHH-H-HHHHHHcCCC
Q 022540 244 DPQKDTYVMCHHG-MRSLQ-V-AQWLQTQGFR 272 (295)
Q Consensus 244 ~~~~~ivv~C~~g-~rs~~-a-a~~L~~~G~~ 272 (295)
..+.+|+|+|..| .||.. + +..+...|.+
T Consensus 88 ~~~~~vlvHC~aG~~RS~~~~~ayl~~~~~~~ 119 (154)
T 2r0b_A 88 QMGGKVLVHGNAGISRSAAFVIAYIMETFGMK 119 (154)
T ss_dssp HTTCCEEEECSSSSSHHHHHHHHHHHHHHTCC
T ss_pred hcCCCEEEEcCCCCChHHHHHHHHHHHHcCCC
Confidence 3578999999988 68774 3 3344456653
No 108
>1wrm_A Dual specificity phosphatase 22; DSP, JNK, hydrolase; HET: MES; 1.50A {Homo sapiens}
Probab=65.51 E-value=5.1 Score=31.01 Aligned_cols=29 Identities=24% Similarity=0.343 Sum_probs=19.7
Q ss_pred CCCCcEEEEeCCC-hhHHHH--HHHHHHcCCC
Q 022540 244 DPQKDTYVMCHHG-MRSLQV--AQWLQTQGFR 272 (295)
Q Consensus 244 ~~~~~ivv~C~~g-~rs~~a--a~~L~~~G~~ 272 (295)
..+.+|+|+|..| .||..+ +..+...|.+
T Consensus 81 ~~~~~VlVHC~aG~~RSg~~~~ayLm~~~~~~ 112 (165)
T 1wrm_A 81 LRGESCLVHCLAGVSRSVTLVIAYIMTVTDFG 112 (165)
T ss_dssp HTTCEEEEECSSSSSHHHHHHHHHHHHTSSCC
T ss_pred HCCCeEEEECCCCCChhHHHHHHHHHHHcCCC
Confidence 3578999999988 687653 4444445643
No 109
>1zzw_A Dual specificity protein phosphatase 10; MKP, PTP, hydrolase; 1.60A {Homo sapiens}
Probab=65.37 E-value=6 Score=29.90 Aligned_cols=28 Identities=18% Similarity=0.320 Sum_probs=19.6
Q ss_pred CCCcEEEEeCCC-hhHHHH-H-HHHHHcCCC
Q 022540 245 PQKDTYVMCHHG-MRSLQV-A-QWLQTQGFR 272 (295)
Q Consensus 245 ~~~~ivv~C~~g-~rs~~a-a-~~L~~~G~~ 272 (295)
.+.+|+|+|..| .||..+ + ..+...|.+
T Consensus 82 ~~~~VlVHC~~G~~RSg~~~~ayl~~~~~~~ 112 (149)
T 1zzw_A 82 CGKGLLIHCQAGVSRSATIVIAYLMKHTRMT 112 (149)
T ss_dssp TTCEEEEECSSSSSHHHHHHHHHHHHHSCCC
T ss_pred cCCeEEEECCCCCCHHHHHHHHHHHHHcCCC
Confidence 578999999988 787654 3 334456653
No 110
>1yz4_A DUSP15, dual specificity phosphatase-like 15 isoform A; hydrolase; HET: BOG; 2.40A {Homo sapiens}
Probab=64.75 E-value=6 Score=30.35 Aligned_cols=28 Identities=21% Similarity=0.268 Sum_probs=19.6
Q ss_pred CCCcEEEEeCCC-hhHHHH--HHHHHHcCCC
Q 022540 245 PQKDTYVMCHHG-MRSLQV--AQWLQTQGFR 272 (295)
Q Consensus 245 ~~~~ivv~C~~g-~rs~~a--a~~L~~~G~~ 272 (295)
.+.+|+|+|..| .||..+ +..+...|.+
T Consensus 83 ~~~~VlVHC~aG~~RSg~~~~aylm~~~~~~ 113 (160)
T 1yz4_A 83 NGGNCLVHSFAGISRSTTIVTAYVMTVTGLG 113 (160)
T ss_dssp TTCCEEEEETTSSSHHHHHHHHHHHHHHCCC
T ss_pred cCCeEEEECCCCCchHHHHHHHHHHHHcCCC
Confidence 578999999998 787633 3444556654
No 111
>3rgo_A Protein-tyrosine phosphatase mitochondrial 1; phosphatidylglycerol phosphate (PGP) phosphatase, hydrolase; 1.93A {Mus musculus} PDB: 3rgq_A*
Probab=64.12 E-value=5.7 Score=30.13 Aligned_cols=29 Identities=28% Similarity=0.445 Sum_probs=19.6
Q ss_pred CCCCcEEEEeCCCh-hHHHH-H-HHHHHcCCC
Q 022540 244 DPQKDTYVMCHHGM-RSLQV-A-QWLQTQGFR 272 (295)
Q Consensus 244 ~~~~~ivv~C~~g~-rs~~a-a-~~L~~~G~~ 272 (295)
..+.+|+|+|..|. ||..+ + ..+...|.+
T Consensus 87 ~~~~~vlVHC~~G~~Rsg~~~~a~l~~~~~~~ 118 (157)
T 3rgo_A 87 ALGQCVYVHCKAGRSRSATMVAAYLIQVHNWS 118 (157)
T ss_dssp HTTCEEEEESSSSSSHHHHHHHHHHHHHHTCC
T ss_pred HCCCEEEEECCCCCChHHHHHHHHHHHHcCCC
Confidence 35689999999886 87654 3 334446653
No 112
>1xri_A AT1G05000; structural genomics, protein structure initiative, CESG for eukaryotic structural genomics, phosphoprote phosphatase; 3.30A {Arabidopsis thaliana} SCOP: c.45.1.1 PDB: 2q47_A
Probab=63.85 E-value=4.8 Score=30.47 Aligned_cols=28 Identities=14% Similarity=0.232 Sum_probs=19.8
Q ss_pred CCCcEEEEeCCCh-hHHHH-HHHHHHcCCC
Q 022540 245 PQKDTYVMCHHGM-RSLQV-AQWLQTQGFR 272 (295)
Q Consensus 245 ~~~~ivv~C~~g~-rs~~a-a~~L~~~G~~ 272 (295)
.+.+|+|+|..|. |+..+ +..|...|.+
T Consensus 91 ~~~~vlvHC~aG~~RTg~~~a~~l~~~g~~ 120 (151)
T 1xri_A 91 KNHPVLIHCKRGKHRTGCLVGCLRKLQKWC 120 (151)
T ss_dssp GGCSEEEECSSSSSHHHHHHHHHHHHTTBC
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHHHhCCC
Confidence 4689999999885 87644 4455556754
No 113
>3rgc_A Possible periplasmic protein; ppiase, chaperone; 2.30A {Campylobacter jejuni}
Probab=63.32 E-value=5.5 Score=33.26 Aligned_cols=46 Identities=9% Similarity=-0.215 Sum_probs=37.8
Q ss_pred CCCcceeEecccccChHhhhccccCCCCCC-CCCCCccEEEeeEEec
Q 022540 53 NSNSFHIHIISRSFTSPKAASFSSGTEGSS-PGGGDREILVQHLLVK 98 (295)
Q Consensus 53 ~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~-~~~~~~~~~~~hIl~~ 98 (295)
.+|.+||+..+.++++|+.+.+.+++++++ |...+..||+-.+.=.
T Consensus 160 l~g~lg~~~~~~l~~~~~~a~~~l~~G~is~pv~t~~G~hiikv~~~ 206 (252)
T 3rgc_A 160 LKPQNASLNTSNADPRLLGLLSQIPVGSFSPVLNGKNGYELYEVKSK 206 (252)
T ss_dssp SCCEEEEEETTTSCHHHHHHHHHSCTTCBCCCBTTTTCEEEEEEEEC
T ss_pred cccccceecHHhcCHHHHHHHHcCCCCCcCCcEEeCCeEEEEEEecc
Confidence 578999999999999999999999887755 5667777887766544
No 114
>2esb_A Dual specificity protein phosphatase 18; alpha/beta structure, hydrolase; HET: EPE; 2.00A {Homo sapiens}
Probab=63.06 E-value=6.9 Score=31.12 Aligned_cols=29 Identities=24% Similarity=0.310 Sum_probs=20.3
Q ss_pred CCCCcEEEEeCCC-hhHHH-H-HHHHHHcCCC
Q 022540 244 DPQKDTYVMCHHG-MRSLQ-V-AQWLQTQGFR 272 (295)
Q Consensus 244 ~~~~~ivv~C~~g-~rs~~-a-a~~L~~~G~~ 272 (295)
..+.+|+|+|..| .||.. + +..+...|++
T Consensus 95 ~~~~~VLVHC~aG~sRS~~vv~ayLm~~~~~s 126 (188)
T 2esb_A 95 MKQGRTLLHCAAGVSRSAALCLAYLMKYHAMS 126 (188)
T ss_dssp HTTCCEEEECSSSSSHHHHHHHHHHHHHSCCC
T ss_pred HcCCEEEEECCCCCchHHHHHHHHHHHHcCCC
Confidence 3578999999988 78764 3 4445556653
No 115
>2hxp_A Dual specificity protein phosphatase 9; human phosphatase, structural genomics, PSI-2, protein structure initiative; 1.83A {Homo sapiens} PDB: 3lj8_A 1mkp_A
Probab=60.28 E-value=7.5 Score=29.72 Aligned_cols=28 Identities=25% Similarity=0.228 Sum_probs=19.2
Q ss_pred CCCcEEEEeCCC-hhHHHH--HHHHHHcCCC
Q 022540 245 PQKDTYVMCHHG-MRSLQV--AQWLQTQGFR 272 (295)
Q Consensus 245 ~~~~ivv~C~~g-~rs~~a--a~~L~~~G~~ 272 (295)
.+.+|+|+|..| .||..+ +..+...|++
T Consensus 84 ~~~~VlVHC~~G~~RS~~vv~ayLm~~~~~~ 114 (155)
T 2hxp_A 84 QNCGVLVHSLAGVSRSVTVTVAYLMQKLHLS 114 (155)
T ss_dssp TTCEEEEECSSSSSHHHHHHHHHHHHHHTCC
T ss_pred cCCcEEEECCCCCchhHHHHHHHHHHHcCCC
Confidence 578999999988 787643 3344455653
No 116
>1rxd_A Protein tyrosine phosphatase type IVA, member 1; protein tyrosine phosphatase IVA1...; structural genomics, NYSGXRC, unknown function, PSI; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1xm2_A 1zck_A 1r6h_A 1v3a_A
Probab=57.67 E-value=10 Score=28.63 Aligned_cols=28 Identities=32% Similarity=0.313 Sum_probs=18.9
Q ss_pred CCCcEEEEeCCC-hhHHH-HHHHHHHcCCC
Q 022540 245 PQKDTYVMCHHG-MRSLQ-VAQWLQTQGFR 272 (295)
Q Consensus 245 ~~~~ivv~C~~g-~rs~~-aa~~L~~~G~~ 272 (295)
++.||+|+|..| .||.. ++..|...|.+
T Consensus 95 ~~~~vlVHC~aG~~Rtg~~~a~~l~~~~~~ 124 (159)
T 1rxd_A 95 PGCCIAVHCVAGLGRAPVLVALALIEGGMK 124 (159)
T ss_dssp TTCEEEEECSSSSTTHHHHHHHHHHHTTCC
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHHhCCC
Confidence 568999999987 57654 44455555643
No 117
>2hjv_A ATP-dependent RNA helicase DBPA; parallel alpha-beta, hydrolase; 1.95A {Bacillus subtilis}
Probab=56.67 E-value=9.8 Score=29.14 Aligned_cols=37 Identities=16% Similarity=0.337 Sum_probs=30.7
Q ss_pred CCCcEEEEeCCChhHHHHHHHHHHcCCCceEEccccHh
Q 022540 245 PQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIH 282 (295)
Q Consensus 245 ~~~~ivv~C~~g~rs~~aa~~L~~~G~~~v~~l~GG~~ 282 (295)
...+++|+|++...+...+..|...|+. +..+.|++.
T Consensus 34 ~~~~~lVF~~~~~~~~~l~~~L~~~~~~-~~~~hg~~~ 70 (163)
T 2hjv_A 34 NPDSCIIFCRTKEHVNQLTDELDDLGYP-CDKIHGGMI 70 (163)
T ss_dssp CCSSEEEECSSHHHHHHHHHHHHHTTCC-EEEECTTSC
T ss_pred CCCcEEEEECCHHHHHHHHHHHHHcCCc-EEEEeCCCC
Confidence 3457999999988889999999999985 778888754
No 118
>2jgn_A DBX, DDX3, ATP-dependent RNA helicase DDX3X; phosphorylation, nucleotide-binding, hydrolase, RNA-binding, ATP-binding, DNA-binding, nuclear protein; 1.91A {Homo sapiens}
Probab=55.92 E-value=12 Score=29.47 Aligned_cols=39 Identities=13% Similarity=0.211 Sum_probs=28.8
Q ss_pred CCCCcEEEEeCCChhHHHHHHHHHHcCCCceEEccccHhh
Q 022540 244 DPQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIHA 283 (295)
Q Consensus 244 ~~~~~ivv~C~~g~rs~~aa~~L~~~G~~~v~~l~GG~~~ 283 (295)
.++.+++|+|++-..+...+..|...|+. +..+.|++..
T Consensus 44 ~~~~k~lVF~~~~~~~~~l~~~L~~~g~~-~~~lhg~~~~ 82 (185)
T 2jgn_A 44 GKDSLTLVFVETKKGADSLEDFLYHEGYA-CTSIHGDRSQ 82 (185)
T ss_dssp -CCSCEEEEESCHHHHHHHHHHHHHTTCC-EEEEC-----
T ss_pred CCCCeEEEEECCHHHHHHHHHHHHHcCCc-eEEEeCCCCH
Confidence 35678999999988888999999999984 8888887653
No 119
>2oud_A Dual specificity protein phosphatase 10; A central five-stranded B-sheet, hydrolase; 2.80A {Homo sapiens}
Probab=54.17 E-value=10 Score=29.64 Aligned_cols=28 Identities=21% Similarity=0.409 Sum_probs=19.3
Q ss_pred CCCcEEEEeCCC-hhHHHH-HHHH-HHcCCC
Q 022540 245 PQKDTYVMCHHG-MRSLQV-AQWL-QTQGFR 272 (295)
Q Consensus 245 ~~~~ivv~C~~g-~rs~~a-a~~L-~~~G~~ 272 (295)
.+.+|+|+|..| .||..+ +.+| ...|++
T Consensus 86 ~~~~VlVHC~aG~~RSg~~v~ayLm~~~~~~ 116 (177)
T 2oud_A 86 CGKGLLIHCQAGVSRSATIVIAYLMKHTRMT 116 (177)
T ss_dssp TTCEEEEECSSSSSHHHHHHHHHHHHTSCCC
T ss_pred cCCcEEEEcCCCCCchHHHHHHHHHHHcCCC
Confidence 578999999988 687654 3334 446653
No 120
>2wgp_A Dual specificity protein phosphatase 14; MKP6, DUSP14, hydrolase, dual specifici phosphatase; 1.88A {Homo sapiens}
Probab=54.10 E-value=11 Score=30.00 Aligned_cols=28 Identities=25% Similarity=0.335 Sum_probs=19.5
Q ss_pred CCCcEEEEeCCC-hhHHHH--HHHHHHcCCC
Q 022540 245 PQKDTYVMCHHG-MRSLQV--AQWLQTQGFR 272 (295)
Q Consensus 245 ~~~~ivv~C~~g-~rs~~a--a~~L~~~G~~ 272 (295)
.+.+|+|+|..| .||..+ +..+...|++
T Consensus 102 ~~~~VlVHC~aG~~RSgtvv~ayLm~~~~~s 132 (190)
T 2wgp_A 102 KHGATLVHCAAGVSRSATLCIAYLMKFHNVC 132 (190)
T ss_dssp TTCCEEEECSSSSSHHHHHHHHHHHHHHCCC
T ss_pred cCCCEEEECCCCCCHHHHHHHHHHHHHcCCC
Confidence 578999999988 687633 4445556653
No 121
>2rb4_A ATP-dependent RNA helicase DDX25; rossmann fold, structural genomics, structural consortium, SGC, alternative initiation, ATP-binding, devel protein; 2.80A {Homo sapiens}
Probab=53.70 E-value=9.9 Score=29.48 Aligned_cols=37 Identities=14% Similarity=0.229 Sum_probs=30.6
Q ss_pred CCCcEEEEeCCChhHHHHHHHHHHcCCCceEEccccHh
Q 022540 245 PQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIH 282 (295)
Q Consensus 245 ~~~~ivv~C~~g~rs~~aa~~L~~~G~~~v~~l~GG~~ 282 (295)
+..+++|+|++-..+...+..|...|+. +..+.|++.
T Consensus 33 ~~~~~lVF~~~~~~~~~l~~~L~~~~~~-~~~~~g~~~ 69 (175)
T 2rb4_A 33 TIGQAIIFCQTRRNAKWLTVEMIQDGHQ-VSLLSGELT 69 (175)
T ss_dssp CCSEEEEECSCHHHHHHHHHHHHTTTCC-EEEECSSCC
T ss_pred CCCCEEEEECCHHHHHHHHHHHHHcCCc-EEEEeCCCC
Confidence 3468999999988888999999999984 778888753
No 122
>3f81_A Dual specificity protein phosphatase 3; hydrolase, protein dual-specificity phosphatase, inhibitor; HET: STT; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1vhr_A* 1j4x_A*
Probab=53.57 E-value=11 Score=29.42 Aligned_cols=27 Identities=30% Similarity=0.459 Sum_probs=18.8
Q ss_pred CCcEEEEeCCCh-hHHH-HHHHH-HHcCCC
Q 022540 246 QKDTYVMCHHGM-RSLQ-VAQWL-QTQGFR 272 (295)
Q Consensus 246 ~~~ivv~C~~g~-rs~~-aa~~L-~~~G~~ 272 (295)
+.+|+|+|..|. ||.. ++..| ...|++
T Consensus 115 ~~~VlVHC~~G~~RSg~~v~ayLm~~~~~~ 144 (183)
T 3f81_A 115 NGRVLVHCREGYSRSPTLVIAYLMMRQKMD 144 (183)
T ss_dssp TCCEEEECSSSSSHHHHHHHHHHHHHHCCC
T ss_pred CCeEEEECCCCcchHHHHHHHHHHHHhCCC
Confidence 789999999884 7765 44444 556653
No 123
>1t5i_A C_terminal domain of A probable ATP-dependent RNA helicase; RECA-like fold, PRE-mRNA processing protein; 1.90A {Homo sapiens} SCOP: c.37.1.19
Probab=53.05 E-value=12 Score=29.01 Aligned_cols=37 Identities=19% Similarity=0.310 Sum_probs=30.8
Q ss_pred CCCcEEEEeCCChhHHHHHHHHHHcCCCceEEccccHh
Q 022540 245 PQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIH 282 (295)
Q Consensus 245 ~~~~ivv~C~~g~rs~~aa~~L~~~G~~~v~~l~GG~~ 282 (295)
+..+++|+|++-..+...+..|...|+. +..+.|++.
T Consensus 30 ~~~~~lVF~~~~~~~~~l~~~L~~~~~~-~~~~hg~~~ 66 (172)
T 1t5i_A 30 EFNQVVIFVKSVQRCIALAQLLVEQNFP-AIAIHRGMP 66 (172)
T ss_dssp CCSSEEEECSSHHHHHHHHHHHHHTTCC-EEEECTTSC
T ss_pred CCCcEEEEECCHHHHHHHHHHHHhcCCC-EEEEECCCC
Confidence 4568999999988889999999999985 778888754
No 124
>3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase, nucleus; 2.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1m3g_A
Probab=52.32 E-value=13 Score=27.67 Aligned_cols=28 Identities=21% Similarity=0.282 Sum_probs=18.7
Q ss_pred CCCcEEEEeCCCh-hHH-HHHHHH-HHcCCC
Q 022540 245 PQKDTYVMCHHGM-RSL-QVAQWL-QTQGFR 272 (295)
Q Consensus 245 ~~~~ivv~C~~g~-rs~-~aa~~L-~~~G~~ 272 (295)
.+.+|+|+|..|. ||. .++..| ...|++
T Consensus 80 ~~~~VlVHC~~G~~RS~~~~~aylm~~~~~~ 110 (144)
T 3ezz_A 80 CRGRVLVHSQAGISRSATICLAYLMMKKRVR 110 (144)
T ss_dssp TTCCEEEEESSSSSHHHHHHHHHHHHHHTCC
T ss_pred cCCeEEEECCCCCChhHHHHHHHHHHHcCCC
Confidence 5689999999884 765 333444 446653
No 125
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=52.32 E-value=16 Score=30.52 Aligned_cols=30 Identities=23% Similarity=0.369 Sum_probs=24.0
Q ss_pred CcEEEEeCCChh---HHHHHHHHHHcCCCceEEc
Q 022540 247 KDTYVMCHHGMR---SLQVAQWLQTQGFRRVFNV 277 (295)
Q Consensus 247 ~~ivv~C~~g~r---s~~aa~~L~~~G~~~v~~l 277 (295)
.+|+|+|..|+. ...+|++|...||+ |.++
T Consensus 59 ~~v~VlcG~GNNGGDGlv~AR~L~~~G~~-V~v~ 91 (246)
T 1jzt_A 59 KHVFVIAGPGNNGGDGLVCARHLKLFGYN-PVVF 91 (246)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTCC-EEEE
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCCe-EEEE
Confidence 589999998764 56889999999995 6543
No 126
>2y96_A Dual specificity phosphatase DUPD1; hydrolase; 2.38A {Homo sapiens}
Probab=51.40 E-value=14 Score=30.13 Aligned_cols=28 Identities=25% Similarity=0.376 Sum_probs=19.4
Q ss_pred CCCCcEEEEeCCC-hhHHH-HHH-HHHHcCC
Q 022540 244 DPQKDTYVMCHHG-MRSLQ-VAQ-WLQTQGF 271 (295)
Q Consensus 244 ~~~~~ivv~C~~g-~rs~~-aa~-~L~~~G~ 271 (295)
..+.+|+|+|..| .||.. ++. .|...|+
T Consensus 137 ~~~~~VLVHC~aG~sRS~tvv~aYLm~~~~~ 167 (219)
T 2y96_A 137 DDHSKILVHCVMGRSRSATLVLAYLMIHKDM 167 (219)
T ss_dssp STTCCEEEECSSSSSHHHHHHHHHHHHHSCC
T ss_pred ccCCeEEEECCCCCCHHHHHHHHHHHHHcCC
Confidence 4578999999988 67764 333 4455665
No 127
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=51.02 E-value=17 Score=30.67 Aligned_cols=30 Identities=10% Similarity=0.302 Sum_probs=23.9
Q ss_pred CcEEEEeCCChh---HHHHHHHHHHcCCCceEEc
Q 022540 247 KDTYVMCHHGMR---SLQVAQWLQTQGFRRVFNV 277 (295)
Q Consensus 247 ~~ivv~C~~g~r---s~~aa~~L~~~G~~~v~~l 277 (295)
.+|+|+|..|+. ...+|++|...||+ |.++
T Consensus 86 ~~vlVlcG~GNNGGDGlv~AR~L~~~G~~-V~v~ 118 (259)
T 3d3k_A 86 PTVALLCGPHVKGAQGISCGRHLANHDVQ-VILF 118 (259)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTCE-EEEE
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCCe-EEEE
Confidence 579999998764 56889999999995 5543
No 128
>3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine phosphatase, hydrolase; 1.26A {Homo sapiens}
Probab=50.83 E-value=14 Score=27.62 Aligned_cols=29 Identities=14% Similarity=0.176 Sum_probs=18.9
Q ss_pred CCCCcEEEEeCCCh-hHHH-H-HHHHHHcCCC
Q 022540 244 DPQKDTYVMCHHGM-RSLQ-V-AQWLQTQGFR 272 (295)
Q Consensus 244 ~~~~~ivv~C~~g~-rs~~-a-a~~L~~~G~~ 272 (295)
..+.+|+|+|..|. ||.. + +..+...|++
T Consensus 79 ~~~~~VlVHC~~G~sRS~~~v~ayLm~~~~~~ 110 (144)
T 3s4e_A 79 RKDGVVLVHSNAGVSRAAAIVIGFLMNSEQTS 110 (144)
T ss_dssp HTTCCEEEECSSSSSHHHHHHHHHHHHHHCCC
T ss_pred HcCCeEEEEcCCCCchHHHHHHHHHHHHcCCC
Confidence 35679999999885 7643 3 3344556653
No 129
>1fuk_A Eukaryotic initiation factor 4A; helicase, DEAD-box protein, translation; 1.75A {Saccharomyces cerevisiae} SCOP: c.37.1.19
Probab=50.69 E-value=14 Score=28.19 Aligned_cols=37 Identities=11% Similarity=0.268 Sum_probs=30.4
Q ss_pred CCCcEEEEeCCChhHHHHHHHHHHcCCCceEEccccHh
Q 022540 245 PQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIH 282 (295)
Q Consensus 245 ~~~~ivv~C~~g~rs~~aa~~L~~~G~~~v~~l~GG~~ 282 (295)
+..+++|+|++...+...+..|...|+. +..+.|++.
T Consensus 29 ~~~~~lVF~~~~~~~~~l~~~L~~~~~~-~~~~~~~~~ 65 (165)
T 1fuk_A 29 SVTQAVIFCNTRRKVEELTTKLRNDKFT-VSAIYSDLP 65 (165)
T ss_dssp TCSCEEEEESSHHHHHHHHHHHHHTTCC-EEEECTTSC
T ss_pred CCCCEEEEECCHHHHHHHHHHHHHcCCC-EEEEECCCC
Confidence 4567999999988889999999999984 778888754
No 130
>2pq5_A Dual specificity protein phosphatase 13; hydrolase, dual specificity phosphatase, DUSP13, testis and skeletal muscle specific DSP; 2.30A {Homo sapiens} PDB: 2gwo_A
Probab=50.55 E-value=15 Score=29.62 Aligned_cols=28 Identities=25% Similarity=0.400 Sum_probs=19.4
Q ss_pred CCCcEEEEeCCC-hhHHHH-HH-HHHHcCCC
Q 022540 245 PQKDTYVMCHHG-MRSLQV-AQ-WLQTQGFR 272 (295)
Q Consensus 245 ~~~~ivv~C~~g-~rs~~a-a~-~L~~~G~~ 272 (295)
.+.+|+|+|..| .||..+ +. .+...|.+
T Consensus 130 ~~~~VLVHC~aG~sRS~tvv~aYLm~~~~~s 160 (205)
T 2pq5_A 130 PQGRVLVHCAMGVSRSATLVLAFLMIYENMT 160 (205)
T ss_dssp TTCCEEEECSSSSSHHHHHHHHHHHHHSCCC
T ss_pred CCCeEEEECCCCCcHHHHHHHHHHHHHcCCC
Confidence 578999999988 687633 33 44556653
No 131
>2g6z_A Dual specificity protein phosphatase 5; alpha/beta, hydrolase; 2.70A {Homo sapiens}
Probab=50.09 E-value=14 Score=30.09 Aligned_cols=28 Identities=25% Similarity=0.316 Sum_probs=19.3
Q ss_pred CCCCcEEEEeCCC-hhHHH-H-HHHHHHcCC
Q 022540 244 DPQKDTYVMCHHG-MRSLQ-V-AQWLQTQGF 271 (295)
Q Consensus 244 ~~~~~ivv~C~~g-~rs~~-a-a~~L~~~G~ 271 (295)
..+.+|+|+|..| .||.. + +..++..|+
T Consensus 81 ~~~~~VLVHC~aG~sRSgtvv~AYLm~~~g~ 111 (211)
T 2g6z_A 81 EKGGKVLVHSEAGISRSPTICMAYLMKTKQF 111 (211)
T ss_dssp HTTCCEEEEESSSSSHHHHHHHHHHHHHHCC
T ss_pred hcCCeEEEECCCCCCcHHHHHHHHHHHHcCC
Confidence 3578999999988 68763 3 444455565
No 132
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=49.72 E-value=18 Score=31.40 Aligned_cols=30 Identities=10% Similarity=0.302 Sum_probs=23.9
Q ss_pred CcEEEEeCCChh---HHHHHHHHHHcCCCceEEc
Q 022540 247 KDTYVMCHHGMR---SLQVAQWLQTQGFRRVFNV 277 (295)
Q Consensus 247 ~~ivv~C~~g~r---s~~aa~~L~~~G~~~v~~l 277 (295)
.+|+|+|..|+. +..+|++|...||+ |.++
T Consensus 133 ~~vlVlcG~GNNGGDGlv~AR~L~~~G~~-V~V~ 165 (306)
T 3d3j_A 133 PTVALLCGPHVKGAQGISCGRHLANHDVQ-VILF 165 (306)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTCE-EEEE
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCCc-EEEE
Confidence 479999998764 67889999999995 5543
No 133
>3cm3_A Late protein H1, dual specificity protein phosphatase; dual-specificity phosphatase, VH1, hydrolase; 1.32A {Vaccinia virus} PDB: 2rf6_A 2p4d_A
Probab=49.34 E-value=15 Score=28.54 Aligned_cols=28 Identities=18% Similarity=0.095 Sum_probs=19.1
Q ss_pred CCCcEEEEeCCC-hhHHHH--HHHHHHcCCC
Q 022540 245 PQKDTYVMCHHG-MRSLQV--AQWLQTQGFR 272 (295)
Q Consensus 245 ~~~~ivv~C~~g-~rs~~a--a~~L~~~G~~ 272 (295)
.+.+|+|+|..| .||..+ +..+...|.+
T Consensus 107 ~~~~VlVHC~aG~~RSg~~v~aylm~~~~~~ 137 (176)
T 3cm3_A 107 RNEPVLVHSAAGVNRSGAMILAYLMSKNKES 137 (176)
T ss_dssp HTCCEEEECSSSSSHHHHHHHHHHHHHCCSS
T ss_pred CCCcEEEECCcCCCHHHHHHHHHHHHHhCCC
Confidence 468999999988 676533 3444556654
No 134
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=48.33 E-value=19 Score=30.50 Aligned_cols=30 Identities=23% Similarity=0.356 Sum_probs=24.0
Q ss_pred CcEEEEeCCChh---HHHHHHHHHHcCCCceEEc
Q 022540 247 KDTYVMCHHGMR---SLQVAQWLQTQGFRRVFNV 277 (295)
Q Consensus 247 ~~ivv~C~~g~r---s~~aa~~L~~~G~~~v~~l 277 (295)
.+|+|+|..|+. ...+|++|...||+ |.++
T Consensus 80 ~~VlVlcG~GNNGGDGlv~AR~L~~~G~~-V~V~ 112 (265)
T 2o8n_A 80 PTVLVICGPGNNGGDGLVCARHLKLFGYQ-PTIY 112 (265)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTCE-EEEE
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCCc-EEEE
Confidence 589999998764 56889999999995 6543
No 135
>3emu_A Leucine rich repeat and phosphatase domain containing protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.30A {Entamoeba histolytica}
Probab=48.23 E-value=18 Score=27.82 Aligned_cols=29 Identities=14% Similarity=0.229 Sum_probs=19.2
Q ss_pred CCCCcEEEEeCCCh-hHH-HH-HHHHHHcCCC
Q 022540 244 DPQKDTYVMCHHGM-RSL-QV-AQWLQTQGFR 272 (295)
Q Consensus 244 ~~~~~ivv~C~~g~-rs~-~a-a~~L~~~G~~ 272 (295)
..+.+|+|+|..|. ||. .+ +..+...|++
T Consensus 85 ~~~~~VlVHC~~G~sRS~~vv~ayLm~~~~~s 116 (161)
T 3emu_A 85 QRKEGVLIISGTGVNKAPAIVIAFLMYYQRLS 116 (161)
T ss_dssp HTTCEEEEEESSSSSHHHHHHHHHHHHHTTCC
T ss_pred hcCCeEEEEcCCCCcHHHHHHHHHHHHHhCCC
Confidence 35689999999884 764 33 4444556654
No 136
>3rof_A Low molecular weight protein-tyrosine-phosphatase; phosphatase, hydrolase; 1.03A {Staphylococcus aureus}
Probab=47.88 E-value=22 Score=27.46 Aligned_cols=39 Identities=15% Similarity=0.221 Sum_probs=29.5
Q ss_pred CcEEEEeCCC-hhHHHHHHHHHH----cCCCceEEccccHhhcc
Q 022540 247 KDTYVMCHHG-MRSLQVAQWLQT----QGFRRVFNVSGGIHAYA 285 (295)
Q Consensus 247 ~~ivv~C~~g-~rs~~aa~~L~~----~G~~~v~~l~GG~~~W~ 285 (295)
..|+|+|.+. .||..|...|+. .|..++.+...|...|.
T Consensus 7 ~~vLFVC~gN~cRSpmAE~i~~~~~~~~gl~~~~v~SAGt~~~~ 50 (158)
T 3rof_A 7 VDVAFVCLGNICRSPMAEAIMRQRLKDRNIHDIKVHSRGTGSWN 50 (158)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHHHHTTCCSEEEEEEETTCCS
T ss_pred CEEEEEeCCchhHHHHHHHHHHHHHHHcCCCCeEEEecccCCcc
Confidence 4699999753 588888777765 46656778888999984
No 137
>2j16_A SDP-1, tyrosine-protein phosphatase YIL113W; hydrolase, hypothetical protein; 2.7A {Saccharomyces cerevisiae} PDB: 2j17_A* 2j16_B
Probab=44.66 E-value=22 Score=28.07 Aligned_cols=29 Identities=14% Similarity=0.265 Sum_probs=19.6
Q ss_pred CCCCcEEEEeCCC-hhHHH--HHHHHHHcCCC
Q 022540 244 DPQKDTYVMCHHG-MRSLQ--VAQWLQTQGFR 272 (295)
Q Consensus 244 ~~~~~ivv~C~~g-~rs~~--aa~~L~~~G~~ 272 (295)
..+.+|+|+|..| .||.. +|..++..|.+
T Consensus 115 ~~g~~VLVHC~~G~sRS~tvv~ayLm~~~~~s 146 (182)
T 2j16_A 115 TKREKILIHAQCGLSRSATLIIAYIMKYHNLS 146 (182)
T ss_dssp HTTCCEEEEESSCCSHHHHHHHHHHHHHTTCC
T ss_pred hcCCeEEEECCCCCChHHHHHHHHHHHHcCCC
Confidence 3678999999988 57653 34444556653
No 138
>3eaq_A Heat resistant RNA dependent ATPase; DEAD box RNA helicase, dimer, ATP-binding, helicase, hydrolase, nucleotide-binding; 2.30A {Thermus thermophilus} PDB: 3ear_A 3eas_A
Probab=44.56 E-value=17 Score=29.27 Aligned_cols=37 Identities=16% Similarity=0.210 Sum_probs=30.7
Q ss_pred CCCcEEEEeCCChhHHHHHHHHHHcCCCceEEccccHh
Q 022540 245 PQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIH 282 (295)
Q Consensus 245 ~~~~ivv~C~~g~rs~~aa~~L~~~G~~~v~~l~GG~~ 282 (295)
...+++|+|++-..+...+..|...|+. +..+.|++.
T Consensus 30 ~~~~~lVF~~~~~~~~~l~~~L~~~~~~-~~~lhg~~~ 66 (212)
T 3eaq_A 30 SPDRAMVFTRTKAETEEIAQGLLRLGHP-AQALHGDLS 66 (212)
T ss_dssp CCSCEEEECSSHHHHHHHHHHHHHHTCC-EEEECSSSC
T ss_pred CCCeEEEEeCCHHHHHHHHHHHHHcCCC-EEEEECCCC
Confidence 4568999999877888999999999985 778888754
No 139
>3s4o_A Protein tyrosine phosphatase-like protein; structural genomics, medical structural genomics of pathogen protozoa, MSGPP, unknown function; HET: MSE EPE; 2.30A {Leishmania major}
Probab=42.64 E-value=25 Score=26.57 Aligned_cols=28 Identities=29% Similarity=0.235 Sum_probs=18.6
Q ss_pred CCCcEEEEeCCC-hhHH-HHHHHHHHc-CCC
Q 022540 245 PQKDTYVMCHHG-MRSL-QVAQWLQTQ-GFR 272 (295)
Q Consensus 245 ~~~~ivv~C~~g-~rs~-~aa~~L~~~-G~~ 272 (295)
++.||+|+|..| .||. .++..|... |.+
T Consensus 108 ~~~~vlVHC~aG~~RTg~~~a~~L~~~~~~~ 138 (167)
T 3s4o_A 108 PPPTIGVHCVAGLGRAPILVALALVEYGNVS 138 (167)
T ss_dssp CCCEEEEECSSSSSHHHHHHHHHHHHTTCCC
T ss_pred CCCcEEEECCCCCCHHHHHHHHHHHHhCCCC
Confidence 378999999987 4664 444455444 653
No 140
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=41.79 E-value=20 Score=25.89 Aligned_cols=29 Identities=21% Similarity=0.284 Sum_probs=21.5
Q ss_pred CCCCcEEEEeCCChhHHHHHHHHHH----cCCC
Q 022540 244 DPQKDTYVMCHHGMRSLQVAQWLQT----QGFR 272 (295)
Q Consensus 244 ~~~~~ivv~C~~g~rs~~aa~~L~~----~G~~ 272 (295)
.+...|++.|.+|..+...+..+++ .|++
T Consensus 4 ~~~mkIlL~C~aGmSTsllv~km~~~a~~~gi~ 36 (108)
T 3nbm_A 4 SKELKVLVLCAGSGTSAQLANAINEGANLTEVR 36 (108)
T ss_dssp -CCEEEEEEESSSSHHHHHHHHHHHHHHHHTCS
T ss_pred ccCceEEEECCCCCCHHHHHHHHHHHHHHCCCc
Confidence 3455799999999888877777654 5764
No 141
>2q05_A Late protein H1, dual specificity protein phosphatase; structural genomics, APC7320, P protein structure initiative; HET: MSE; 2.57A {Vaccinia virus WR}
Probab=41.14 E-value=25 Score=27.92 Aligned_cols=28 Identities=21% Similarity=0.277 Sum_probs=18.8
Q ss_pred CCCcEEEEeCCC-hhHHHH-HHHH-HHcCCC
Q 022540 245 PQKDTYVMCHHG-MRSLQV-AQWL-QTQGFR 272 (295)
Q Consensus 245 ~~~~ivv~C~~g-~rs~~a-a~~L-~~~G~~ 272 (295)
.+.||+|+|..| .||..+ +..| ...|.+
T Consensus 124 ~~~~VlVHC~aG~~RSg~~v~~yL~~~~~~~ 154 (195)
T 2q05_A 124 RNEPVLVHCAAGVNRSGAMILAYLMSKNKES 154 (195)
T ss_dssp TTCCEEEECSSSSSHHHHHHHHHHHHHCCSS
T ss_pred cCCcEEEEcCCCCChHHHHHHHHHHHHhCCC
Confidence 578999999988 677544 3333 446654
No 142
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=38.74 E-value=13 Score=26.74 Aligned_cols=27 Identities=15% Similarity=0.426 Sum_probs=18.6
Q ss_pred CCcEEEEeCCChhHHHHHHHHH----HcCCC
Q 022540 246 QKDTYVMCHHGMRSLQVAQWLQ----TQGFR 272 (295)
Q Consensus 246 ~~~ivv~C~~g~rs~~aa~~L~----~~G~~ 272 (295)
...|++.|.+|..+..++..|+ +.|++
T Consensus 4 ~mkIlvvC~~G~~TSll~~kl~~~~~~~gi~ 34 (109)
T 2l2q_A 4 SMNILLVCGAGMSTSMLVQRIEKYAKSKNIN 34 (109)
T ss_dssp CEEEEEESSSSCSSCHHHHHHHHHHHHHTCS
T ss_pred ceEEEEECCChHhHHHHHHHHHHHHHHCCCC
Confidence 3459999999976546666554 46774
No 143
>3ohg_A Uncharacterized protein from DUF2233 family; structural genomics, unknown function, joint center for STRU genomics, JCSG; HET: MSE; 1.80A {Bacteroides ovatus}
Probab=38.43 E-value=30 Score=29.66 Aligned_cols=26 Identities=23% Similarity=0.422 Sum_probs=22.5
Q ss_pred ChhHHHHHHHHHHcCCCceEEccccH
Q 022540 256 GMRSLQVAQWLQTQGFRRVFNVSGGI 281 (295)
Q Consensus 256 g~rs~~aa~~L~~~G~~~v~~l~GG~ 281 (295)
|..-..++..|+++|..+..+|+||-
T Consensus 218 G~tl~ela~~~~~lG~~~AlnLDGGg 243 (285)
T 3ohg_A 218 GLTLPHLATMMKAVGCYNAINLDGGG 243 (285)
T ss_dssp CBCHHHHHHHHHHHTCSEEEECCCGG
T ss_pred CCCHHHHHHHHHHcCCCeEEECCCCc
Confidence 45568899999999999999999974
No 144
>1yn9_A BVP, polynucleotide 5'-phosphatase; RNA triphosphatase, cysteine phosphatase, P-loop, hydrolase; HET: PO4; 1.50A {Autographa californicanucleopolyhedrovirus}
Probab=37.99 E-value=27 Score=26.76 Aligned_cols=28 Identities=32% Similarity=0.469 Sum_probs=19.0
Q ss_pred CCCcEEEEeCCC-hhHH-HHHHHHHH-cCCC
Q 022540 245 PQKDTYVMCHHG-MRSL-QVAQWLQT-QGFR 272 (295)
Q Consensus 245 ~~~~ivv~C~~g-~rs~-~aa~~L~~-~G~~ 272 (295)
.+.+|+|+|..| .|+. .++..|.. .|++
T Consensus 112 ~~~~vlVHC~aG~~RTg~~va~~L~~~~~~~ 142 (169)
T 1yn9_A 112 PGMLVGVHCTHGINRTGYMVCRYLMHTLGIA 142 (169)
T ss_dssp TTSEEEEECSSSSHHHHHHHHHHHHHHHCCC
T ss_pred CCCcEEEECCCCCChHHHHHHHHHHHHhCCC
Confidence 678999999987 5665 34444443 6763
No 145
>1p8a_A Protein tyrosine phosphatase; hydrolase; NMR {Tritrichomonas foetus} SCOP: c.44.1.1
Probab=37.80 E-value=6.5 Score=30.01 Aligned_cols=39 Identities=13% Similarity=0.055 Sum_probs=29.4
Q ss_pred CcEEEEeCC-ChhHHHHHHHHHHcCCCceEEccccHhhcc
Q 022540 247 KDTYVMCHH-GMRSLQVAQWLQTQGFRRVFNVSGGIHAYA 285 (295)
Q Consensus 247 ~~ivv~C~~-g~rs~~aa~~L~~~G~~~v~~l~GG~~~W~ 285 (295)
..|+|+|.+ -.||..|..+|+...-.++.+...|...|.
T Consensus 5 ~~VLFVC~gN~cRSpmAEal~~~~~~~~~~v~SAGt~~~~ 44 (146)
T 1p8a_A 5 KAVLFVCLGNICRSPACEGICRDMVGDKLIIDSAATSGFH 44 (146)
T ss_dssp CCEEEESSSSCSSSTTHHHHHHHHHSSCSSCEEECSCTTS
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHhcCCCEEEEeeecCCcc
Confidence 369999974 368999988888865344667778888884
No 146
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=37.69 E-value=44 Score=24.78 Aligned_cols=43 Identities=14% Similarity=0.237 Sum_probs=32.5
Q ss_pred CCCCCcEEEEeCCChhHHHHHHHHHHcCCCceEEccccHhhcc
Q 022540 243 FDPQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIHAYA 285 (295)
Q Consensus 243 ~~~~~~ivv~C~~g~rs~~aa~~L~~~G~~~v~~l~GG~~~W~ 285 (295)
++++-.|.|+.............|...||..|.....|..+|.
T Consensus 9 m~k~~rILiVDD~~~~r~~l~~~L~~~G~~~v~~a~~g~~al~ 51 (134)
T 3to5_A 9 LNKNMKILIVDDFSTMRRIVKNLLRDLGFNNTQEADDGLTALP 51 (134)
T ss_dssp CCTTCCEEEECSCHHHHHHHHHHHHHTTCCCEEEESSHHHHHH
T ss_pred hCCCCEEEEEeCCHHHHHHHHHHHHHcCCcEEEEECCHHHHHH
Confidence 3556678888877666677788899999987777777777664
No 147
>2p6n_A ATP-dependent RNA helicase DDX41; DEAD, structural genomics, structural genomic consortium, SGC, hydrolase; 2.60A {Homo sapiens}
Probab=37.03 E-value=26 Score=27.69 Aligned_cols=36 Identities=11% Similarity=0.275 Sum_probs=29.7
Q ss_pred CCcEEEEeCCChhHHHHHHHHHHcCCCceEEccccHh
Q 022540 246 QKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIH 282 (295)
Q Consensus 246 ~~~ivv~C~~g~rs~~aa~~L~~~G~~~v~~l~GG~~ 282 (295)
..+++|+|++-..+...+..|...|+. +..+.|++.
T Consensus 54 ~~~~lVF~~~~~~~~~l~~~L~~~g~~-~~~lhg~~~ 89 (191)
T 2p6n_A 54 PPPVLIFAEKKADVDAIHEYLLLKGVE-AVAIHGGKD 89 (191)
T ss_dssp CSCEEEECSCHHHHHHHHHHHHHHTCC-EEEECTTSC
T ss_pred CCCEEEEECCHHHHHHHHHHHHHcCCc-EEEEeCCCC
Confidence 347999999988888999999999985 777888753
No 148
>4h3k_B RNA polymerase II subunit A C-terminal domain PHO SSU72; heat repeat, phosphatase, RNA polymerase II, hydrolase; HET: SEP; 2.00A {Homo sapiens} PDB: 3o2q_B* 4h3h_B* 3o2s_B
Probab=36.19 E-value=38 Score=27.49 Aligned_cols=29 Identities=24% Similarity=0.351 Sum_probs=24.2
Q ss_pred cEEEEeCCC-hhHHHHHHHHHHcCCCceEEc
Q 022540 248 DTYVMCHHG-MRSLQVAQWLQTQGFRRVFNV 277 (295)
Q Consensus 248 ~ivv~C~~g-~rs~~aa~~L~~~G~~~v~~l 277 (295)
.+.++|.+- +||..|=..|.+.|| +|.-+
T Consensus 27 r~avVCaSN~NRSMEAH~~L~k~Gf-~V~Sf 56 (214)
T 4h3k_B 27 RVAVVSSSNQNRSMEAHNILSKRGF-SVRSF 56 (214)
T ss_dssp EEEEEESSSSSHHHHHHHHHHHTTC-EEEEE
T ss_pred eEEEECCCCcchhHHHHHHHHHCCC-ceEee
Confidence 578999864 799999999999999 57654
No 149
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=35.47 E-value=36 Score=24.28 Aligned_cols=26 Identities=23% Similarity=0.362 Sum_probs=17.7
Q ss_pred CcEEEEeCCChhHH-HHH----HHHHHcCCC
Q 022540 247 KDTYVMCHHGMRSL-QVA----QWLQTQGFR 272 (295)
Q Consensus 247 ~~ivv~C~~g~rs~-~aa----~~L~~~G~~ 272 (295)
+.|+++|.+|.-+. .++ ..+.+.|++
T Consensus 19 ~kIlvvC~sG~gTS~m~~~kl~~~~~~~gi~ 49 (110)
T 3czc_A 19 VKVLTACGNGMGSSMVIKMKVENALRQLGVS 49 (110)
T ss_dssp EEEEEECCCCHHHHHHHHHHHHHHHHHTTCC
T ss_pred cEEEEECCCcHHHHHHHHHHHHHHHHHcCCC
Confidence 56999999997554 444 244557875
No 150
>4etn_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.10A {Bacillus subtilis} PDB: 4eti_A 1zgg_A
Probab=35.44 E-value=17 Score=29.02 Aligned_cols=39 Identities=23% Similarity=0.315 Sum_probs=29.1
Q ss_pred CCcEEEEeCCC-hhHHHHHHHHHHc----CCCceEEccccHhhcc
Q 022540 246 QKDTYVMCHHG-MRSLQVAQWLQTQ----GFRRVFNVSGGIHAYA 285 (295)
Q Consensus 246 ~~~ivv~C~~g-~rs~~aa~~L~~~----G~~~v~~l~GG~~~W~ 285 (295)
...|+|+|.+. .||..|..+|+.. |. ++.+...|..+|.
T Consensus 34 ~~~VLFVC~gNiCRSpmAEai~r~~~~~~g~-~~~v~SAGt~~~~ 77 (184)
T 4etn_A 34 SMDIIFVCTGNTSRSPMAEALFKSIAEREGL-NVNVRSAGVFASP 77 (184)
T ss_dssp CEEEEEEESSSSSHHHHHHHHHHHHHHHHTC-CEEEEEEETTCCT
T ss_pred CCEEEEECCCchhHHHHHHHHHHHHHHhcCC-cEEEEeeecCCcC
Confidence 35799999853 5888888877653 42 5778888998885
No 151
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=34.71 E-value=33 Score=24.74 Aligned_cols=28 Identities=14% Similarity=0.296 Sum_probs=19.0
Q ss_pred CCCcEEEEeCCChhHHH-HHHHH----HHcCCC
Q 022540 245 PQKDTYVMCHHGMRSLQ-VAQWL----QTQGFR 272 (295)
Q Consensus 245 ~~~~ivv~C~~g~rs~~-aa~~L----~~~G~~ 272 (295)
+-..|+++|.+|.-+.. ++..| .+.|++
T Consensus 20 ~~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~ 52 (113)
T 1tvm_A 20 SKRKIIVACGGAVATSTMAAEEIKELCQSHNIP 52 (113)
T ss_dssp SSEEEEEESCSCSSHHHHHHHHHHHHHHHTTCC
T ss_pred cccEEEEECCCCHHHHHHHHHHHHHHHHHcCCe
Confidence 34579999999976544 45555 457775
No 152
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=33.02 E-value=24 Score=25.18 Aligned_cols=26 Identities=15% Similarity=0.280 Sum_probs=18.9
Q ss_pred CcEEEEeCCChhHHHHHHHH----HHcCCC
Q 022540 247 KDTYVMCHHGMRSLQVAQWL----QTQGFR 272 (295)
Q Consensus 247 ~~ivv~C~~g~rs~~aa~~L----~~~G~~ 272 (295)
++|++.|.+|..+..++..+ .+.|++
T Consensus 4 kkIll~Cg~G~sTS~l~~k~~~~~~~~gi~ 33 (106)
T 1e2b_A 4 KHIYLFSSAGMSTSLLVSKMRAQAEKYEVP 33 (106)
T ss_dssp EEEEEECSSSTTTHHHHHHHHHHHHHSCCS
T ss_pred cEEEEECCCchhHHHHHHHHHHHHHHCCCC
Confidence 36999999998766665554 557875
No 153
>3n8i_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, hydrolase, protein-ligand complex; HET: NLA; 1.50A {Homo sapiens} SCOP: c.44.1.1 PDB: 5pnt_A* 1xww_A 1bvh_A 1dg9_A* 1phr_A 1pnt_A 1z12_A 1z13_A 1c0e_A 2p4u_A
Probab=32.13 E-value=50 Score=25.34 Aligned_cols=40 Identities=18% Similarity=0.174 Sum_probs=29.6
Q ss_pred CCcEEEEeCCC-hhHHHHHHHHHH----cCCC-ceEEccccHhhcc
Q 022540 246 QKDTYVMCHHG-MRSLQVAQWLQT----QGFR-RVFNVSGGIHAYA 285 (295)
Q Consensus 246 ~~~ivv~C~~g-~rs~~aa~~L~~----~G~~-~v~~l~GG~~~W~ 285 (295)
...|+|+|.+. .||..|...|+. .|.. ++.+...|...|.
T Consensus 5 ~~~vLFVC~gN~cRSpmAE~~~~~~~~~~gl~~~~~v~SAGt~~~~ 50 (157)
T 3n8i_A 5 TKSVLFVCLGNICRSPIAEAVFRKLVTDQNISENWRVDSAATSGYE 50 (157)
T ss_dssp CEEEEEEESSSSSHHHHHHHHHHHHHHHTTCGGGEEEEEEESSSTT
T ss_pred CCEEEEECCCchhHHHHHHHHHHHHHHHcCCCCcEEEEeeecCccc
Confidence 34799999753 588888777755 4664 5778888999883
No 154
>3rz2_A Protein tyrosine phosphatase type IVA 1; tyrosine phosphatase, dual specific phosphatase, COMP with peptide, hydrolase; 2.80A {Rattus norvegicus} PDB: 1x24_A 1zcl_A
Probab=31.40 E-value=40 Score=26.40 Aligned_cols=29 Identities=31% Similarity=0.332 Sum_probs=19.5
Q ss_pred CCCCcEEEEeCCC-hhHH-HHHHHHHHcCCC
Q 022540 244 DPQKDTYVMCHHG-MRSL-QVAQWLQTQGFR 272 (295)
Q Consensus 244 ~~~~~ivv~C~~g-~rs~-~aa~~L~~~G~~ 272 (295)
.++.+|+|+|..| .|+. .++..|...|++
T Consensus 115 ~~~~~VlVHC~aG~gRSg~~va~~L~~~g~~ 145 (189)
T 3rz2_A 115 EPGCCIAVHCVAGLGRAPVLVALALIEGGMK 145 (189)
T ss_dssp STTCEEEEECSSSSTTHHHHHHHHHHTTTCC
T ss_pred CCCCcEEEECCCCCCHHHHHHHHHHHHcCCC
Confidence 4678999999987 4765 445555555553
No 155
>1fpz_A Cyclin-dependent kinase inhibitor 3; alpha-beta sandwich, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.1 PDB: 1fq1_A*
Probab=30.28 E-value=35 Score=27.29 Aligned_cols=28 Identities=21% Similarity=0.152 Sum_probs=18.5
Q ss_pred CCCcEEEEeCCCh-hHHH-HHHHHHHc--CCC
Q 022540 245 PQKDTYVMCHHGM-RSLQ-VAQWLQTQ--GFR 272 (295)
Q Consensus 245 ~~~~ivv~C~~g~-rs~~-aa~~L~~~--G~~ 272 (295)
.+.+|+|+|..|. |+.. ++..|... |.+
T Consensus 132 ~~~~VlVHC~aG~gRTg~~~a~~L~~~~~g~~ 163 (212)
T 1fpz_A 132 NYRKTLIHSYGGLGRSCLVAACLLLYLSDTIS 163 (212)
T ss_dssp TTCCEEEECSSSSSHHHHHHHHHHHHHCSSCC
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHHHhccCCC
Confidence 5789999999874 7654 34455443 653
No 156
>1d1q_A Tyrosine phosphatase (E.C.3.1.3.48); beta-alpha-beta, hydrolase; HET: 4NP; 1.70A {Saccharomyces cerevisiae} SCOP: c.44.1.1 PDB: 1d2a_A* 1d1p_A*
Probab=30.01 E-value=30 Score=26.65 Aligned_cols=39 Identities=15% Similarity=0.006 Sum_probs=28.9
Q ss_pred CcEEEEeCC-ChhHHHHHHHHHH----cCCC-c-eEEccccHhhcc
Q 022540 247 KDTYVMCHH-GMRSLQVAQWLQT----QGFR-R-VFNVSGGIHAYA 285 (295)
Q Consensus 247 ~~ivv~C~~-g~rs~~aa~~L~~----~G~~-~-v~~l~GG~~~W~ 285 (295)
..|+|+|.+ -.||..|..+|+. .|.. + +.+...|...|.
T Consensus 8 ~~VLFVCtgN~cRSpmAEal~~~~~~~~gl~~~~~~v~SAGt~~~~ 53 (161)
T 1d1q_A 8 ISVAFIALGNFCRSPMAEAIFKHEVEKANLENRFNKIDSFGTSNYH 53 (161)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHHHHTTCGGGEEEEEEEESSCTT
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHHHHHcCCCCCeEEEEeccccCCc
Confidence 469999974 3588888877765 3553 3 778888998884
No 157
>4fak_A Ribosomal RNA large subunit methyltransferase H; alpha/beta methyltransferase rossmann fold, rRNA methylation rRNA, ribosomal protein; HET: SAM PG4; 1.70A {Staphylococcus aureus} PDB: 1vh0_A
Probab=29.62 E-value=31 Score=26.89 Aligned_cols=47 Identities=28% Similarity=0.285 Sum_probs=35.6
Q ss_pred cccCCCCCcEEEEeCCCh--hHHHHHHHHHH---cCCCceEEccccHhhccc
Q 022540 240 TVKFDPQKDTYVMCHHGM--RSLQVAQWLQT---QGFRRVFNVSGGIHAYAT 286 (295)
Q Consensus 240 ~~~~~~~~~ivv~C~~g~--rs~~aa~~L~~---~G~~~v~~l~GG~~~W~~ 286 (295)
+..++++.-+|+.|-.|. .|...|..|.+ .|..++..+.||-.|...
T Consensus 68 l~~i~~~~~vI~LD~~Gk~~sS~~fA~~l~~~~~~g~~~i~FvIGG~~Gl~~ 119 (163)
T 4fak_A 68 LAKIKPQSTVITLEIQGKMLSSEGLAQELNQRMTQGQSDFVFVIGGSNGLHK 119 (163)
T ss_dssp HHTCCTTSEEEEEEEEEEECCHHHHHHHHHHHHHTTCCEEEEEECBTTBCCH
T ss_pred HHhCCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCcceEEEEECCCccCH
Confidence 445677777888887664 58888888866 688889999999776654
No 158
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity phosphatase, carbohydrate BIND hydrolase; 2.40A {Arabidopsis thaliana}
Probab=29.49 E-value=38 Score=28.93 Aligned_cols=22 Identities=27% Similarity=0.387 Sum_probs=14.9
Q ss_pred CCCcEEEEeCCCh-hHHH-HHHHH
Q 022540 245 PQKDTYVMCHHGM-RSLQ-VAQWL 266 (295)
Q Consensus 245 ~~~~ivv~C~~g~-rs~~-aa~~L 266 (295)
.+.+|+|+|..|. ||.. ++..|
T Consensus 105 ~g~~VLVHC~aG~sRS~tvv~ayL 128 (294)
T 3nme_A 105 NGGVTYVHSTAGMGRAPAVALTYM 128 (294)
T ss_dssp HCSEEEEECSSSSSHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchhHHHHHHHH
Confidence 3678999999884 7653 33433
No 159
>1vkr_A Mannitol-specific PTS system enzyme iiabc compone; phosphotransferase, transferase, kinase, sugar transport; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1vrv_A* 2few_B*
Probab=28.64 E-value=41 Score=24.76 Aligned_cols=27 Identities=33% Similarity=0.475 Sum_probs=18.2
Q ss_pred CCCcEEEEeCCChhHHHH-HHHH----HHcCC
Q 022540 245 PQKDTYVMCHHGMRSLQV-AQWL----QTQGF 271 (295)
Q Consensus 245 ~~~~ivv~C~~g~rs~~a-a~~L----~~~G~ 271 (295)
+-..|+++|.+|.-+..+ +..| .+.|+
T Consensus 12 ~~kkIlvVC~sGmgTS~ml~~klkk~~~e~gi 43 (125)
T 1vkr_A 12 HVRKIIVACDAGMGSSAMGAGVLRKKIQDAGL 43 (125)
T ss_dssp CCCEEEECCSSSSHHHHHHHHHHHHHHHHTTC
T ss_pred cccEEEEECCCcHHHHHHHHHHHHHHHHHCCC
Confidence 345799999999765544 4444 45787
No 160
>1oyw_A RECQ helicase, ATP-dependent DNA helicase; winged helix, helix-turn-helix, ATP binding, Zn(2+) binding, hydrolase; 1.80A {Escherichia coli} SCOP: a.4.5.43 c.37.1.19 c.37.1.19 PDB: 1oyy_A*
Probab=28.56 E-value=42 Score=31.16 Aligned_cols=37 Identities=19% Similarity=0.341 Sum_probs=31.6
Q ss_pred CCCcEEEEeCCChhHHHHHHHHHHcCCCceEEccccHh
Q 022540 245 PQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIH 282 (295)
Q Consensus 245 ~~~~ivv~C~~g~rs~~aa~~L~~~G~~~v~~l~GG~~ 282 (295)
++.+++|||++-..+...+..|...|+. +..+.||+.
T Consensus 235 ~~~~~IVf~~sr~~~e~l~~~L~~~g~~-~~~~h~~l~ 271 (523)
T 1oyw_A 235 RGKSGIIYCNSRAKVEDTAARLQSKGIS-AAAYHAGLE 271 (523)
T ss_dssp TTCCEEEECSSHHHHHHHHHHHHHTTCC-EEEECTTSC
T ss_pred CCCcEEEEeCCHHHHHHHHHHHHHCCCC-EEEecCCCC
Confidence 5678999999988889999999999984 888888864
No 161
>1jl3_A Arsenate reductase; alpha-beta fold, PTP-loop, oxidoreductase; 1.60A {Bacillus subtilis} SCOP: c.44.1.1 PDB: 1z2d_A 1z2e_A 2ipa_B
Probab=28.32 E-value=51 Score=24.52 Aligned_cols=36 Identities=25% Similarity=0.272 Sum_probs=27.5
Q ss_pred cEEEEeCC-ChhHHHHHHHHHHcCCCceEEccccHhh
Q 022540 248 DTYVMCHH-GMRSLQVAQWLQTQGFRRVFNVSGGIHA 283 (295)
Q Consensus 248 ~ivv~C~~-g~rs~~aa~~L~~~G~~~v~~l~GG~~~ 283 (295)
.|+|+|.+ -.||..|..+|+...-.++.+...|...
T Consensus 5 ~VLFVC~gN~cRSpmAEai~~~~~~~~~~v~SAGt~~ 41 (139)
T 1jl3_A 5 IIYFLCTGNSCRSQMAEGWAKQYLGDEWKVYSAGIEA 41 (139)
T ss_dssp EEEEEESSSSSHHHHHHHHHHHHSCTTEEEEEEESSC
T ss_pred eEEEEcCCchHHHHHHHHHHHHhCCCCEEEEcCcCCC
Confidence 69999974 3689999999988653457777777765
No 162
>1to0_A Hypothetical UPF0247 protein YYDA; structural genomics, unknown function, PSI, protein structure initiative; 2.50A {Bacillus subtilis} SCOP: c.116.1.3
Probab=28.32 E-value=31 Score=27.00 Aligned_cols=48 Identities=21% Similarity=0.268 Sum_probs=34.4
Q ss_pred cccCCCCCcEEEEeCCCh--hHHHHHHHHHH---cCCCceEEccccHhhcccc
Q 022540 240 TVKFDPQKDTYVMCHHGM--RSLQVAQWLQT---QGFRRVFNVSGGIHAYATK 287 (295)
Q Consensus 240 ~~~~~~~~~ivv~C~~g~--rs~~aa~~L~~---~G~~~v~~l~GG~~~W~~~ 287 (295)
+..++++.-+|+.|-.|. .|...|..|.+ .|..++..+.||-.|+..+
T Consensus 64 l~~i~~~~~vI~LD~~Gk~~sS~~fA~~l~~~~~~G~~~i~FvIGGa~Gl~~~ 116 (167)
T 1to0_A 64 LSKISPDAHVIALAIEGKMKTSEELADTIDKLATYGKSKVTFVIGGSLGLSDT 116 (167)
T ss_dssp HTTSCTTSEEEEEEEEEEECCHHHHHHHHHHHHTTTCCEEEEEECCSSCCCHH
T ss_pred HhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCceEEEEEECCCCCCHH
Confidence 334455555777787664 68888988876 6777899999998777543
No 163
>3rh0_A Arsenate reductase; oxidoreductase; 1.72A {Corynebacterium glutamicum}
Probab=28.08 E-value=51 Score=25.06 Aligned_cols=37 Identities=22% Similarity=0.143 Sum_probs=27.5
Q ss_pred CcEEEEeCCC-hhHHHHHHHHHHcCCCceEEccccHhh
Q 022540 247 KDTYVMCHHG-MRSLQVAQWLQTQGFRRVFNVSGGIHA 283 (295)
Q Consensus 247 ~~ivv~C~~g-~rs~~aa~~L~~~G~~~v~~l~GG~~~ 283 (295)
..|+|+|.+. .||.+|..+|+...-.++.+...|...
T Consensus 21 ~~VLFVC~gN~cRSpmAEal~~~~~~~~~~v~SAGt~~ 58 (148)
T 3rh0_A 21 KSVLFVCVGNGGKSQMAAALAQKYASDSVEIHSAGTKP 58 (148)
T ss_dssp CEEEEEESSSSSHHHHHHHHHHHHCCTTSEEEEEESSC
T ss_pred CEEEEECCCchhHHHHHHHHHHHhcCCCEEEEecccCC
Confidence 4699999853 689999999988664566676666543
No 164
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=27.77 E-value=32 Score=31.46 Aligned_cols=39 Identities=15% Similarity=0.189 Sum_probs=30.3
Q ss_pred CcEEEEeCCChhHHHHHHHHHH--cCCCceEEccccHhhcc
Q 022540 247 KDTYVMCHHGMRSLQVAQWLQT--QGFRRVFNVSGGIHAYA 285 (295)
Q Consensus 247 ~~ivv~C~~g~rs~~aa~~L~~--~G~~~v~~l~GG~~~W~ 285 (295)
..-+++|++|..+..+|..|.+ -|-++|...+|||++|.
T Consensus 125 ~~~v~f~~sGsEA~e~AlklAr~~t~r~~ii~~~~~yHG~t 165 (456)
T 4atq_A 125 AKRTVLFNSGAEAVENAVKVARLATGRDAVVAFDHAYHGRT 165 (456)
T ss_dssp CEEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSS
T ss_pred CcEEEEeCChHHHHHHHHHHHhhhhcCCeEEEEecccCCcc
Confidence 4567889999998877777754 35556888999999986
No 165
>3i32_A Heat resistant RNA dependent ATPase; RNA helicase, dimer, RNA recognition motif, ATP-BIND helicase, nucleotide-binding; 2.80A {Thermus thermophilus}
Probab=27.77 E-value=40 Score=28.87 Aligned_cols=37 Identities=16% Similarity=0.207 Sum_probs=30.5
Q ss_pred CCCcEEEEeCCChhHHHHHHHHHHcCCCceEEccccHh
Q 022540 245 PQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIH 282 (295)
Q Consensus 245 ~~~~ivv~C~~g~rs~~aa~~L~~~G~~~v~~l~GG~~ 282 (295)
...+++|+|++-..+...+..|...|+. +..+.|++.
T Consensus 27 ~~~~~LVF~~t~~~~~~l~~~L~~~g~~-~~~lhg~l~ 63 (300)
T 3i32_A 27 SPDRAMVFTRTKAETEEIAQGLLRLGHP-AQALHGDMS 63 (300)
T ss_dssp CCSSEEEECSSHHHHHHHHHHHHTTTCC-EEEECSCCC
T ss_pred CCCCEEEEECCHHHHHHHHHHHHhCCCC-EEEEeCCCC
Confidence 3678999999877888899999999984 778888753
No 166
>1u14_A Hypothetical UPF0244 protein YJJX; structural genomics, protein structure initiative, PSI, midwest center for structural genomics, MCSG; 1.68A {Salmonella typhimurium} SCOP: c.51.4.3 PDB: 1u5w_A
Probab=27.73 E-value=31 Score=27.15 Aligned_cols=41 Identities=24% Similarity=0.326 Sum_probs=34.9
Q ss_pred HHHHHHhcCCCcHHHHHHHhCCCC-CccCCCccccccCCCCc
Q 022540 106 SELQRRVSQGEDLSDLAVEHSICP-SKGEGGMLGWVRKGQLV 146 (295)
Q Consensus 106 ~~~~~~i~~g~~F~~~a~~~S~~~-~~~~gG~lg~~~~~~~~ 146 (295)
..+.+.|++|....++..++.... .+.++|.+|.++.+.+.
T Consensus 109 ~~v~~~i~~G~ELG~vmd~~~~~~~i~~~~GaIG~lT~g~~~ 150 (172)
T 1u14_A 109 AVILDRVRQGEALGPVMSQYTGIDEIGRKEGAIGVFTAGKLT 150 (172)
T ss_dssp HHHHHHHTTTCCHHHHHHHHHCCTTGGGTTHHHHHHTTTSSC
T ss_pred HHHHHHHHcCCCHHHHHHHHhCCCccCccCchHhhhcCCcee
Confidence 456777889999999999988765 88999999999998875
No 167
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=27.63 E-value=43 Score=31.09 Aligned_cols=31 Identities=23% Similarity=0.185 Sum_probs=24.3
Q ss_pred CCCcEEEEeCCChh---HHHHHHHHHHcCCCceEE
Q 022540 245 PQKDTYVMCHHGMR---SLQVAQWLQTQGFRRVFN 276 (295)
Q Consensus 245 ~~~~ivv~C~~g~r---s~~aa~~L~~~G~~~v~~ 276 (295)
+.++|+|+|..|+. ...+|++|...||+ |.+
T Consensus 51 ~~~~v~VlcG~GNNGGDGlv~AR~L~~~G~~-V~v 84 (502)
T 3rss_A 51 SDYRFLVLCGGGNNGGDGFVVARNLLGVVKD-VLV 84 (502)
T ss_dssp TTCEEEEEECSSHHHHHHHHHHHHHTTTSSE-EEE
T ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHCCCe-EEE
Confidence 45789999998765 56889999999985 543
No 168
>2zfz_A Arginine repressor; DNA binding protein, core, oligomeriza domain, alpha/beta topology, structural genomics; HET: ARG; 1.85A {Mycobacterium tuberculosis} PDB: 3bue_A 3cag_A*
Probab=27.43 E-value=44 Score=22.42 Aligned_cols=31 Identities=10% Similarity=0.143 Sum_probs=24.7
Q ss_pred cccccCCCCCcEEEEeCCChhHHHHHHHHHH
Q 022540 238 DITVKFDPQKDTYVMCHHGMRSLQVAQWLQT 268 (295)
Q Consensus 238 ~~~~~~~~~~~ivv~C~~g~rs~~aa~~L~~ 268 (295)
+.+..+..|.+|+|+|+++..+......|.+
T Consensus 47 eIlGTIAGDDTIlvi~r~~~~a~~l~~~l~~ 77 (79)
T 2zfz_A 47 QVVGTIAGDDTILVVAREPTTGAQLAGMFEN 77 (79)
T ss_dssp TEEEEEECSSEEEEEECTTCCHHHHHHHHHH
T ss_pred CeEEEEecCCEEEEEECCHHHHHHHHHHHHh
Confidence 3455566889999999999988888887765
No 169
>1xxa_A ARGR, arginine repressor; complex (DNA binding protein/peptide); HET: ARG; 2.20A {Escherichia coli K12} SCOP: d.74.2.1 PDB: 1xxb_A* 1xxc_A
Probab=27.38 E-value=49 Score=22.19 Aligned_cols=31 Identities=6% Similarity=0.048 Sum_probs=25.1
Q ss_pred ccccCCCCCcEEEEeCCChhHHHHHHHHHHc
Q 022540 239 ITVKFDPQKDTYVMCHHGMRSLQVAQWLQTQ 269 (295)
Q Consensus 239 ~~~~~~~~~~ivv~C~~g~rs~~aa~~L~~~ 269 (295)
.+..+..|.+|+|+|+++..+......+++.
T Consensus 43 I~GTIAGDDTIlvi~r~~~~a~~l~~~i~~l 73 (78)
T 1xxa_A 43 ILGTIAGDDTIFTTPANGFTVKDLYEAILEL 73 (78)
T ss_dssp EEEEEECSSEEEEEECTTCCHHHHHHHHHTT
T ss_pred eEEEEecCCEEEEEECCHHHHHHHHHHHHHH
Confidence 4555667899999999999998888888653
No 170
>2i4i_A ATP-dependent RNA helicase DDX3X; DEAD, structural genomics, SGC, structural GE consortium, hydrolase; HET: AMP; 2.20A {Homo sapiens}
Probab=27.30 E-value=44 Score=29.27 Aligned_cols=38 Identities=13% Similarity=0.218 Sum_probs=31.7
Q ss_pred CCCCcEEEEeCCChhHHHHHHHHHHcCCCceEEccccHh
Q 022540 244 DPQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIH 282 (295)
Q Consensus 244 ~~~~~ivv~C~~g~rs~~aa~~L~~~G~~~v~~l~GG~~ 282 (295)
..+.+++|+|++-..+...+..|...|+. +..+.|++.
T Consensus 274 ~~~~~~lVf~~~~~~~~~l~~~L~~~~~~-~~~~h~~~~ 311 (417)
T 2i4i_A 274 GKDSLTLVFVETKKGADSLEDFLYHEGYA-CTSIHGDRS 311 (417)
T ss_dssp CTTCEEEEECSSHHHHHHHHHHHHHTTCC-EEEECTTSC
T ss_pred CCCCeEEEEECCHHHHHHHHHHHHHCCCC-eeEecCCCC
Confidence 46778999999988888999999999984 778888754
No 171
>2l17_A Synarsc, arsenate reductase; alpha/beta sandwich, oxidoreductase; NMR {Synechocystis} PDB: 2l18_A 2l19_A
Probab=27.22 E-value=51 Score=24.45 Aligned_cols=35 Identities=20% Similarity=0.354 Sum_probs=26.6
Q ss_pred cEEEEeCC-ChhHHHHHHHHHHcCCCceEEccccHh
Q 022540 248 DTYVMCHH-GMRSLQVAQWLQTQGFRRVFNVSGGIH 282 (295)
Q Consensus 248 ~ivv~C~~-g~rs~~aa~~L~~~G~~~v~~l~GG~~ 282 (295)
.|+|+|.+ -.||..|..+|+...-.++.+...|..
T Consensus 6 ~VLFVC~gN~cRSpmAEa~~~~~~~~~~~v~SAGt~ 41 (134)
T 2l17_A 6 KVMFVCKRNSCRSQMAEGFAKTLGAGKIAVTSCGLE 41 (134)
T ss_dssp EEEEECCSSTHHHHHHHHHHHHHSBTTEEEEEECCT
T ss_pred EEEEEeCCchHHHHHHHHHHHHHcCCCEEEEcccCC
Confidence 69999974 368999999998865445777776765
No 172
>2v1x_A ATP-dependent DNA helicase Q1; DNA strand annealing, mismatch repair, nucleotide-binding, DNA-binding, polymorphism, nuclear protein, ATPase; HET: ADP; 2.00A {Homo sapiens} PDB: 2wwy_A*
Probab=27.13 E-value=47 Score=31.44 Aligned_cols=37 Identities=19% Similarity=0.204 Sum_probs=31.9
Q ss_pred CCCcEEEEeCCChhHHHHHHHHHHcCCCceEEccccHh
Q 022540 245 PQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIH 282 (295)
Q Consensus 245 ~~~~ivv~C~~g~rs~~aa~~L~~~G~~~v~~l~GG~~ 282 (295)
++.+++|||++-..+..++..|...|+ ++..+.||+.
T Consensus 266 ~~~~~IVf~~sr~~~e~la~~L~~~g~-~~~~~h~~l~ 302 (591)
T 2v1x_A 266 KGQSGIIYCFSQKDSEQVTVSLQNLGI-HAGAYHANLE 302 (591)
T ss_dssp TTCEEEEECSSHHHHHHHHHHHHHTTC-CEEEECTTSC
T ss_pred cCCCeEEEeCcHHHHHHHHHHHHHCCC-CEEEecCCCC
Confidence 567899999998889999999999998 4888888864
No 173
>2yjt_D ATP-dependent RNA helicase SRMB, regulator of ribonuclease activity A; hydrolase inhibitor-hydrolase complex, DEAD box RNA helicase; 2.90A {Escherichia coli}
Probab=33.05 E-value=13 Score=28.58 Aligned_cols=37 Identities=19% Similarity=0.386 Sum_probs=29.3
Q ss_pred CCCcEEEEeCCChhHHHHHHHHHHcCCCceEEccccHh
Q 022540 245 PQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIH 282 (295)
Q Consensus 245 ~~~~ivv~C~~g~rs~~aa~~L~~~G~~~v~~l~GG~~ 282 (295)
...+++|+|++-..+...+..|...|+. +..+.|++.
T Consensus 29 ~~~~~iVF~~~~~~~~~l~~~L~~~~~~-~~~~~g~~~ 65 (170)
T 2yjt_D 29 EATRSIVFVRKRERVHELANWLREAGIN-NCYLEGEMV 65 (170)
Confidence 3467899999888888889999888874 667777764
No 174
>1b4b_A Arginine repressor; core, oligomerization domain, helix TUR; HET: ARG; 2.20A {Geobacillus stearothermophilus} SCOP: d.74.2.1
Probab=25.76 E-value=40 Score=22.15 Aligned_cols=31 Identities=13% Similarity=0.234 Sum_probs=24.0
Q ss_pred cccccCCCCCcEEEEeCCChhHHHHHHHHHH
Q 022540 238 DITVKFDPQKDTYVMCHHGMRSLQVAQWLQT 268 (295)
Q Consensus 238 ~~~~~~~~~~~ivv~C~~g~rs~~aa~~L~~ 268 (295)
+.+..+..|.+|+++|+++..+......+.+
T Consensus 39 eI~GTIAGDDTIlvi~r~~~~a~~l~~~i~~ 69 (71)
T 1b4b_A 39 EIVGTICGDDTCLIICRTPKDAKKVSNQLLS 69 (71)
T ss_dssp TEEEEEECSSEEEEEESSHHHHHHHHHHHHT
T ss_pred CeEEEEeeCCEEEEEECCHHHHHHHHHHHHH
Confidence 3455556789999999998888888777754
No 175
>2c46_A MRNA capping enzyme; phosphatase, transferase, hydrolase, mRNA processing, multifunctional enzyme, nucleotidyltransferase; 1.6A {Homo sapiens} PDB: 1i9s_A 1i9t_A
Probab=25.55 E-value=44 Score=27.62 Aligned_cols=27 Identities=26% Similarity=0.445 Sum_probs=16.7
Q ss_pred CCCcEEEEeCCC-hhHH-HHHHHHHH-cCC
Q 022540 245 PQKDTYVMCHHG-MRSL-QVAQWLQT-QGF 271 (295)
Q Consensus 245 ~~~~ivv~C~~g-~rs~-~aa~~L~~-~G~ 271 (295)
++.+|+|+|..| .|+. .++..|.. .|+
T Consensus 140 ~~~~VlVHC~aG~gRTGt~ia~yLm~~~~~ 169 (241)
T 2c46_A 140 PPELIGVHCTHGFNRTGFLICAFLVEKMDW 169 (241)
T ss_dssp -CEEEEEECSSSSHHHHHHHHHHHHHTTCC
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHHHhCC
Confidence 357999999987 5664 33444433 554
No 176
>1xti_A Probable ATP-dependent RNA helicase P47; alpha-beta fold, gene regulation; 1.95A {Homo sapiens} SCOP: c.37.1.19 c.37.1.19 PDB: 1xtj_A* 1xtk_A
Probab=25.06 E-value=54 Score=28.31 Aligned_cols=37 Identities=19% Similarity=0.310 Sum_probs=30.6
Q ss_pred CCCcEEEEeCCChhHHHHHHHHHHcCCCceEEccccHh
Q 022540 245 PQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIH 282 (295)
Q Consensus 245 ~~~~ivv~C~~g~rs~~aa~~L~~~G~~~v~~l~GG~~ 282 (295)
+..+++|+|++-..+...+..|...|+. +..+.|++.
T Consensus 249 ~~~~~lvf~~~~~~~~~l~~~L~~~~~~-~~~~~~~~~ 285 (391)
T 1xti_A 249 EFNQVVIFVKSVQRCIALAQLLVEQNFP-AIAIHRGMP 285 (391)
T ss_dssp CCSEEEEECSCHHHHHHHHHHHHHTTCC-EEEECTTSC
T ss_pred CCCcEEEEeCcHHHHHHHHHHHHhCCCc-EEEEeCCCC
Confidence 4578999999988888999999999985 777777753
No 177
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=24.52 E-value=81 Score=23.03 Aligned_cols=30 Identities=7% Similarity=0.046 Sum_probs=22.6
Q ss_pred EEEEeCCChhHHHHHHHHHHcCCCceEEccc
Q 022540 249 TYVMCHHGMRSLQVAQWLQTQGFRRVFNVSG 279 (295)
Q Consensus 249 ivv~C~~g~rs~~aa~~L~~~G~~~v~~l~G 279 (295)
-+++|..|.-...++..|.+.|++ |..++-
T Consensus 9 ~viIiG~G~~G~~la~~L~~~g~~-v~vid~ 38 (140)
T 3fwz_A 9 HALLVGYGRVGSLLGEKLLASDIP-LVVIET 38 (140)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCC-EEEEES
T ss_pred CEEEECcCHHHHHHHHHHHHCCCC-EEEEEC
Confidence 366777788888889999999984 666553
No 178
>1ohe_A CDC14B, CDC14B2 phosphatase; protein phosphatase, cell cycle, hydrolase; HET: SEP; 2.20A {Homo sapiens} SCOP: c.45.1.1 c.45.1.1 PDB: 1ohc_A 1ohd_A
Probab=24.43 E-value=58 Score=28.59 Aligned_cols=29 Identities=14% Similarity=0.156 Sum_probs=19.1
Q ss_pred CCCCcEEEEeCCC-hhHHHH-HHHHHH-cCCC
Q 022540 244 DPQKDTYVMCHHG-MRSLQV-AQWLQT-QGFR 272 (295)
Q Consensus 244 ~~~~~ivv~C~~g-~rs~~a-a~~L~~-~G~~ 272 (295)
..+.+|+|+|..| .||..+ +..|.. .|++
T Consensus 267 ~~~~~VLVHC~aG~gRTGtvvaayLm~~~g~s 298 (348)
T 1ohe_A 267 NAEGAIAVHSKAGLGRTGTLIACYIMKHYRMT 298 (348)
T ss_dssp SCSSEEEEECSSSSHHHHHHHHHHHHHHHCCC
T ss_pred hCCCcEEEECCCCCChHHHHHHHHHHHHcCCC
Confidence 4678999999988 676533 334433 6653
No 179
>1jf8_A Arsenate reductase; ptpase I fold, P-loop, sulfinic acid, oxidoreductase; 1.12A {Staphylococcus aureus} SCOP: c.44.1.1 PDB: 1jfv_A 2fxi_A 1lju_A* 1rxi_A 1rxe_A 1ljl_A 2cd7_A 1lk0_A
Probab=23.36 E-value=84 Score=23.09 Aligned_cols=37 Identities=22% Similarity=0.172 Sum_probs=27.6
Q ss_pred CcEEEEeCC-ChhHHHHHHHHHHcCCCceEEccccHhh
Q 022540 247 KDTYVMCHH-GMRSLQVAQWLQTQGFRRVFNVSGGIHA 283 (295)
Q Consensus 247 ~~ivv~C~~-g~rs~~aa~~L~~~G~~~v~~l~GG~~~ 283 (295)
+.|+|+|.+ -.||..|..+|+...-.++.+...|...
T Consensus 4 ~~VLFVC~gN~cRSpmAEa~~~~~~~~~~~v~SAGt~~ 41 (131)
T 1jf8_A 4 KTIYFISTGNSARSQMAEGWGKEILGEGWNVYSAGIET 41 (131)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHSTTTEEEEEEESSC
T ss_pred CEEEEEcCCcchHHHHHHHHHHHhcCCCEEEEcCcCCC
Confidence 369999974 3689999999988643457777777665
No 180
>1hv8_A Putative ATP-dependent RNA helicase MJ0669; RNA-binding protein, ATPase, RNA binding protein; 3.00A {Methanocaldococcus jannaschii} SCOP: c.37.1.19 c.37.1.19
Probab=23.30 E-value=65 Score=27.36 Aligned_cols=38 Identities=18% Similarity=0.361 Sum_probs=31.0
Q ss_pred CCCCcEEEEeCCChhHHHHHHHHHHcCCCceEEccccHh
Q 022540 244 DPQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIH 282 (295)
Q Consensus 244 ~~~~~ivv~C~~g~rs~~aa~~L~~~G~~~v~~l~GG~~ 282 (295)
....+++|+|++-..+...+..|...|+. +..+.|++.
T Consensus 236 ~~~~~~lvf~~~~~~~~~l~~~L~~~~~~-~~~~~~~~~ 273 (367)
T 1hv8_A 236 NKEFYGLVFCKTKRDTKELASMLRDIGFK-AGAIHGDLS 273 (367)
T ss_dssp STTCCEEEECSSHHHHHHHHHHHHHTTCC-EEEECSSSC
T ss_pred cCCCcEEEEECCHHHHHHHHHHHHhcCCC-eEEeeCCCC
Confidence 35667999999988889999999999984 777777753
No 181
>1zwy_A Hypothetical UPF0244 protein VC0702; hypothetical protein, structural genomics, PSI, protein STRU initiative; 1.90A {Vibrio cholerae} SCOP: c.51.4.3 PDB: 1zno_A
Probab=23.22 E-value=34 Score=27.26 Aligned_cols=41 Identities=24% Similarity=0.352 Sum_probs=29.2
Q ss_pred HHHHHHhcCCCcHHHHHHHhCCCC-CccCCCccccccCCCCc
Q 022540 106 SELQRRVSQGEDLSDLAVEHSICP-SKGEGGMLGWVRKGQLV 146 (295)
Q Consensus 106 ~~~~~~i~~g~~F~~~a~~~S~~~-~~~~gG~lg~~~~~~~~ 146 (295)
..+.+.|++|....++..++.... .+.++|.+|.++.+.+.
T Consensus 119 ~~v~~~i~~G~ELG~vmd~~~g~~ni~~~~GaIG~lT~g~~t 160 (185)
T 1zwy_A 119 PLVLERLRQAKELGDVMDEVFGTENIKQKGGAIGLLTRHHLT 160 (185)
T ss_dssp HHHHHHHTTC-CHHHHHHHHHC-------CHHHHHHTTTSSC
T ss_pred HHHHHHHHcCCCHHHHHHHHhCCCcccccCchhhhhcCCcee
Confidence 456777889999999999988765 88999999999998875
No 182
>2p5m_A Arginine repressor; alpha-beta, L-arginine binding domain, DNA binding protein; HET: ARG; 1.95A {Bacillus subtilis} SCOP: d.74.2.1
Probab=23.20 E-value=46 Score=22.58 Aligned_cols=31 Identities=10% Similarity=0.153 Sum_probs=24.1
Q ss_pred cccccCCCCCcEEEEeCCChhHHHHHHHHHH
Q 022540 238 DITVKFDPQKDTYVMCHHGMRSLQVAQWLQT 268 (295)
Q Consensus 238 ~~~~~~~~~~~ivv~C~~g~rs~~aa~~L~~ 268 (295)
+.+..+..|.+|+|+|+++..+......+.+
T Consensus 51 eIlGTIAGDDTIlvi~r~~~~a~~l~~~l~~ 81 (83)
T 2p5m_A 51 EMMGTICGDDTILIICRTPEDTEGVKNRLLE 81 (83)
T ss_dssp TCCEEEECSSEEEEECSSHHHHHHHHHHHHT
T ss_pred CeEEEEecCCEEEEEECCHHHHHHHHHHHHH
Confidence 3455566889999999998888888777754
No 183
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=22.73 E-value=45 Score=30.47 Aligned_cols=42 Identities=21% Similarity=0.234 Sum_probs=31.8
Q ss_pred CCcEEEEeCCChhHHHHHHHHHH--cCCCceEEccccHhhcccc
Q 022540 246 QKDTYVMCHHGMRSLQVAQWLQT--QGFRRVFNVSGGIHAYATK 287 (295)
Q Consensus 246 ~~~ivv~C~~g~rs~~aa~~L~~--~G~~~v~~l~GG~~~W~~~ 287 (295)
.-.-+++|++|..+..+|..|.+ -|-++|....|++++|...
T Consensus 142 ~~~~v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~t~~ 185 (454)
T 4ao9_A 142 QIEQLRFTNSGTEANLMALTAALHFTGRRKIVVFSGGYHGGVLG 185 (454)
T ss_dssp TCSEEEEESSHHHHHHHHHHHHHHHHTCCEEEEETTCBCSTTCB
T ss_pred CCCEEEEeCchHHHHHHHHHHHHhcccCCeEEEEeCCcCCcccc
Confidence 34557889999998877777654 3656788999999998653
No 184
>1s2m_A Putative ATP-dependent RNA helicase DHH1; ATP-binding, RNA-binding, RNA binding protein; 2.10A {Saccharomyces cerevisiae} SCOP: c.37.1.19 c.37.1.19 PDB: 2wax_A* 2way_A
Probab=22.73 E-value=62 Score=28.15 Aligned_cols=37 Identities=11% Similarity=0.296 Sum_probs=30.6
Q ss_pred CCCcEEEEeCCChhHHHHHHHHHHcCCCceEEccccHh
Q 022540 245 PQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIH 282 (295)
Q Consensus 245 ~~~~ivv~C~~g~rs~~aa~~L~~~G~~~v~~l~GG~~ 282 (295)
...+++|+|++-..+...+..|...|+. +..+.|++.
T Consensus 257 ~~~~~lVf~~~~~~~~~l~~~L~~~~~~-~~~~~~~~~ 293 (400)
T 1s2m_A 257 QINQAIIFCNSTNRVELLAKKITDLGYS-CYYSHARMK 293 (400)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHHHTCC-EEEECTTSC
T ss_pred CCCcEEEEEecHHHHHHHHHHHHhcCCC-eEEecCCCC
Confidence 4568999999888888999999999984 777878754
No 185
>1ywf_A Phosphotyrosine protein phosphatase PTPB; four stranded parallel beta sheet with flanking helices, structural genomics, PSI; 1.71A {Mycobacterium tuberculosis} SCOP: c.45.1.5 PDB: 2oz5_A*
Probab=22.37 E-value=73 Score=27.19 Aligned_cols=27 Identities=26% Similarity=0.358 Sum_probs=19.4
Q ss_pred CCcEEEEeCCC-hhHH-HHHHHHHHcCCC
Q 022540 246 QKDTYVMCHHG-MRSL-QVAQWLQTQGFR 272 (295)
Q Consensus 246 ~~~ivv~C~~g-~rs~-~aa~~L~~~G~~ 272 (295)
+.||+|+|..| .|.. .++..|..+|.+
T Consensus 173 ~~pvl~HC~aGkDRTG~~~alll~~~g~~ 201 (296)
T 1ywf_A 173 GRPVLTHCFAGKDRTGFVVALVLEAVGLD 201 (296)
T ss_dssp TCCEEEECSSSSSHHHHHHHHHHHHTTCC
T ss_pred CCCEEEECCCCCccccHHHHHHHHHcCCC
Confidence 78999999976 4654 445555667875
No 186
>2wmy_A WZB, putative acid phosphatase WZB; hydrolase; 2.21A {Escherichia coli}
Probab=22.09 E-value=76 Score=23.97 Aligned_cols=35 Identities=23% Similarity=0.116 Sum_probs=26.7
Q ss_pred cEEEEeCC-ChhHHHHHHHHHHcCCCceEEccccHhh
Q 022540 248 DTYVMCHH-GMRSLQVAQWLQTQGFRRVFNVSGGIHA 283 (295)
Q Consensus 248 ~ivv~C~~-g~rs~~aa~~L~~~G~~~v~~l~GG~~~ 283 (295)
.|+|+|.+ -.||..|...|+... ..+.+...|..+
T Consensus 10 ~VLFVC~gN~cRSpmAEal~r~~~-~~~~v~SAGt~~ 45 (150)
T 2wmy_A 10 SILVICTGNICRSPIGERLLRRLL-PSKKINSAGVGA 45 (150)
T ss_dssp EEEEEESSSSSHHHHHHHHHHHHC-TTSEEEEEETTC
T ss_pred EEEEEcCCchHHHHHHHHHHHHhc-CCCEEEeccccC
Confidence 69999974 368999999998865 346677777765
No 187
>1pp7_U 39 kDa initiator binding protein; core promoter, transcription initation, IBP39, T. vaginalis, transcription/DNA complex; 2.45A {Trichomonas vaginalis} SCOP: a.4.5.44 PDB: 1pp8_U
Probab=21.92 E-value=23 Score=26.11 Aligned_cols=25 Identities=16% Similarity=0.229 Sum_probs=21.1
Q ss_pred HHHHHcCCCceEEccccHhhccccc
Q 022540 264 QWLQTQGFRRVFNVSGGIHAYATKV 288 (295)
Q Consensus 264 ~~L~~~G~~~v~~l~GG~~~W~~~~ 288 (295)
.-|+.+||.+...-.+||.-|..++
T Consensus 85 vNLRdL~F~Q~q~dk~g~T~W~~~g 109 (131)
T 1pp7_U 85 VNLRDLAFEQLQHDKGGWTQWKRSG 109 (131)
T ss_dssp HHHHHTTCEEEEEEETTEEEEECTT
T ss_pred ccchhccceeeccccCceeEEecCC
Confidence 4589999998888789999998765
No 188
>1o6d_A Hypothetical UPF0247 protein TM0844; structural genomics, unknown function; 1.66A {Thermotoga maritima} SCOP: c.116.1.3
Probab=21.57 E-value=65 Score=25.03 Aligned_cols=48 Identities=23% Similarity=0.328 Sum_probs=34.2
Q ss_pred cccCCCCCcEEEEeCCCh--hHHHHHHHHHH---cCCCceEEccccHhhccccc
Q 022540 240 TVKFDPQKDTYVMCHHGM--RSLQVAQWLQT---QGFRRVFNVSGGIHAYATKV 288 (295)
Q Consensus 240 ~~~~~~~~~ivv~C~~g~--rs~~aa~~L~~---~G~~~v~~l~GG~~~W~~~~ 288 (295)
+..++++.-+|+.|-.|. .|...|..|.+ .| .++..+.||-.++..+.
T Consensus 59 l~~i~~~~~vI~LD~~Gk~~sS~~fA~~l~~~~~~G-~~i~FvIGGa~Gl~~~v 111 (163)
T 1o6d_A 59 TNRILPGSFVMVMDKRGEEVSSEEFADFLKDLEMKG-KDITILIGGPYGLNEEI 111 (163)
T ss_dssp HTTCCTTCEEEEEEEEEEECCHHHHHHHHHHHHHHT-CCEEEEECCTTCCCGGG
T ss_pred HHhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcC-CeEEEEEECCCCCCHHH
Confidence 344555545777777664 58888888765 58 78999999988876553
No 189
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=21.51 E-value=1.1e+02 Score=23.85 Aligned_cols=31 Identities=10% Similarity=0.034 Sum_probs=25.6
Q ss_pred cCCCCCcEEEEeCCChhH--HHHHHHHHHcCCC
Q 022540 242 KFDPQKDTYVMCHHGMRS--LQVAQWLQTQGFR 272 (295)
Q Consensus 242 ~~~~~~~ivv~C~~g~rs--~~aa~~L~~~G~~ 272 (295)
.+.+.+.++++|++|... ..+|..+++.|.+
T Consensus 74 ~i~~~D~vii~S~Sg~n~~~ie~A~~ake~G~~ 106 (170)
T 3jx9_A 74 TLHAVDRVLIFTPDTERSDLLASLARYDAWHTP 106 (170)
T ss_dssp CCCTTCEEEEEESCSCCHHHHHHHHHHHHHTCC
T ss_pred CCCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCc
Confidence 467888999999998765 5778889999986
No 190
>3pey_A ATP-dependent RNA helicase DBP5; RECA, DEAD-BOX, ATPase, helicase, mRNA-export, nuclear pore, hydrolase-RNA complex; HET: ADP; 1.40A {Saccharomyces cerevisiae} PDB: 3pew_A* 3pex_A* 3pez_A* 3rrm_A* 3rrn_A* 2kbe_A 3gfp_A 2kbf_A 3pev_A* 3peu_A*
Probab=21.34 E-value=65 Score=27.73 Aligned_cols=37 Identities=11% Similarity=0.152 Sum_probs=30.8
Q ss_pred CCCcEEEEeCCChhHHHHHHHHHHcCCCceEEccccHh
Q 022540 245 PQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIH 282 (295)
Q Consensus 245 ~~~~ivv~C~~g~rs~~aa~~L~~~G~~~v~~l~GG~~ 282 (295)
...+++|+|++-..+...+..|+..|+ ++..+.|++.
T Consensus 242 ~~~~~lvf~~~~~~~~~l~~~l~~~~~-~~~~~~~~~~ 278 (395)
T 3pey_A 242 TIGSSIIFVATKKTANVLYGKLKSEGH-EVSILHGDLQ 278 (395)
T ss_dssp TSSEEEEECSCHHHHHHHHHHHHHTTC-CCEEECTTSC
T ss_pred cCCCEEEEeCCHHHHHHHHHHHHhcCC-cEEEeCCCCC
Confidence 457899999988888899999999998 4788888754
No 191
>3jux_A Protein translocase subunit SECA; protein translocation, ATPase, conformational change, peptide binding, ATP-binding, cell inner membrane; HET: ADP; 3.10A {Thermotoga maritima} PDB: 3din_A*
Probab=20.89 E-value=77 Score=31.23 Aligned_cols=37 Identities=14% Similarity=0.080 Sum_probs=31.4
Q ss_pred CCCcEEEEeCCChhHHHHHHHHHHcCCCceEEccccHh
Q 022540 245 PQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIH 282 (295)
Q Consensus 245 ~~~~ivv~C~~g~rs~~aa~~L~~~G~~~v~~l~GG~~ 282 (295)
+.+|++|+|++-..|...+..|.+.|++ ..++.|+..
T Consensus 473 ~gqpVLVFt~S~e~sE~Ls~~L~~~Gi~-~~vLhgkq~ 509 (822)
T 3jux_A 473 KGQPVLVGTTSIEKSELLSSMLKKKGIP-HQVLNAKYH 509 (822)
T ss_dssp HTCCEEEEESSHHHHHHHHHHHHTTTCC-CEEECSCHH
T ss_pred CCCCEEEEECCHHHHHHHHHHHHHCCCC-EEEeeCCch
Confidence 4689999999999999999999999986 567777643
No 192
>3fht_A ATP-dependent RNA helicase DDX19B; DBP5, DEAD-box helicase, RNA dependent ATPase, mRNA export, nucleocytoplasmic transport, NUP214, CAN; HET: ANP; 2.20A {Homo sapiens} PDB: 3ews_A* 3g0h_A* 3fhc_B
Probab=20.67 E-value=66 Score=27.96 Aligned_cols=37 Identities=22% Similarity=0.339 Sum_probs=30.7
Q ss_pred CCCcEEEEeCCChhHHHHHHHHHHcCCCceEEccccHh
Q 022540 245 PQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIH 282 (295)
Q Consensus 245 ~~~~ivv~C~~g~rs~~aa~~L~~~G~~~v~~l~GG~~ 282 (295)
...+++|+|++-..+...+..|...|+. +..+.|++.
T Consensus 265 ~~~~~lvf~~~~~~~~~l~~~L~~~~~~-~~~~~~~~~ 301 (412)
T 3fht_A 265 TIAQAMIFCHTRKTASWLAAELSKEGHQ-VALLSGEMM 301 (412)
T ss_dssp SSSEEEEECSSHHHHHHHHHHHHHTTCC-CEEECTTSC
T ss_pred CCCCEEEEeCCHHHHHHHHHHHHhCCCe-EEEecCCCC
Confidence 3568999999988889999999999984 778888753
No 193
>2wja_A Putative acid phosphatase WZB; hydrolase; 2.50A {Escherichia coli}
Probab=20.60 E-value=83 Score=24.40 Aligned_cols=36 Identities=22% Similarity=0.118 Sum_probs=27.2
Q ss_pred CcEEEEeCC-ChhHHHHHHHHHHcCCCceEEccccHhh
Q 022540 247 KDTYVMCHH-GMRSLQVAQWLQTQGFRRVFNVSGGIHA 283 (295)
Q Consensus 247 ~~ivv~C~~-g~rs~~aa~~L~~~G~~~v~~l~GG~~~ 283 (295)
..|+|+|.+ -.||..|..+|+... .++.+...|..+
T Consensus 27 ~~VLFVCtgNicRSpmAEal~r~~~-~~~~v~SAGt~~ 63 (168)
T 2wja_A 27 DSILVICTGNICRSPIGERLLRRLL-PSKKINSAGVGA 63 (168)
T ss_dssp SEEEEEESSSSSHHHHHHHHHHHHS-TTSEEEEEETTC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHhc-CCeEEEeeecCC
Confidence 379999974 368999999998865 346677777755
No 194
>2j0s_A ATP-dependent RNA helicase DDX48; mRNA processing, phosphorylation, rRNA processing, mRNA splicing, mRNA transport; HET: ANP; 2.21A {Homo sapiens} SCOP: c.37.1.19 c.37.1.19 PDB: 2j0q_A* 2hyi_C* 3ex7_C* 2xb2_A* 2hxy_A 2j0u_A 2j0u_B 2zu6_A
Probab=20.34 E-value=68 Score=28.01 Aligned_cols=36 Identities=11% Similarity=0.286 Sum_probs=30.1
Q ss_pred CCcEEEEeCCChhHHHHHHHHHHcCCCceEEccccHh
Q 022540 246 QKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIH 282 (295)
Q Consensus 246 ~~~ivv~C~~g~rs~~aa~~L~~~G~~~v~~l~GG~~ 282 (295)
..+++|+|++-..+...+..|...|+. +..+.|++.
T Consensus 276 ~~~~lVf~~~~~~~~~l~~~L~~~~~~-~~~~h~~~~ 311 (410)
T 2j0s_A 276 ITQAVIFCNTKRKVDWLTEKMREANFT-VSSMHGDMP 311 (410)
T ss_dssp SSEEEEECSSHHHHHHHHHHHHHTTCC-CEEECTTSC
T ss_pred CCcEEEEEcCHHHHHHHHHHHHhCCCc-eEEeeCCCC
Confidence 458999999888888999999999984 788888754
No 195
>2fsf_A Preprotein translocase SECA subunit; ATPase, DNA-RNA helicase, protein translocation, protein transport; 2.00A {Escherichia coli} PDB: 2fsg_A* 2fsh_A* 2fsi_A* 2vda_A 3bxz_A*
Probab=20.27 E-value=85 Score=31.22 Aligned_cols=38 Identities=16% Similarity=0.062 Sum_probs=32.1
Q ss_pred CCCCcEEEEeCCChhHHHHHHHHHHcCCCceEEccccHh
Q 022540 244 DPQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIH 282 (295)
Q Consensus 244 ~~~~~ivv~C~~g~rs~~aa~~L~~~G~~~v~~l~GG~~ 282 (295)
.+.+|++|.|++-..|...+..|.+.|++ ..++.|..+
T Consensus 439 ~~gqpvLVft~sie~se~Ls~~L~~~gi~-~~vLnak~~ 476 (853)
T 2fsf_A 439 AKGQPVLVGTISIEKSELVSNELTKAGIK-HNVLNAKFH 476 (853)
T ss_dssp TTTCCEEEEESSHHHHHHHHHHHHHTTCC-CEECCTTCH
T ss_pred cCCCCEEEEECcHHHHHHHHHHHHHCCCC-EEEecCChh
Confidence 35789999999999999999999999996 567777644
No 196
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=20.25 E-value=1.1e+02 Score=22.04 Aligned_cols=29 Identities=17% Similarity=0.304 Sum_probs=21.3
Q ss_pred EEEeCCChhHHHHHHHHHHcCCCceEEccc
Q 022540 250 YVMCHHGMRSLQVAQWLQTQGFRRVFNVSG 279 (295)
Q Consensus 250 vv~C~~g~rs~~aa~~L~~~G~~~v~~l~G 279 (295)
+++|..|.-....+..|.+.|++ |..++-
T Consensus 9 v~I~G~G~iG~~la~~L~~~g~~-V~~id~ 37 (141)
T 3llv_A 9 YIVIGSEAAGVGLVRELTAAGKK-VLAVDK 37 (141)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCC-EEEEES
T ss_pred EEEECCCHHHHHHHHHHHHCCCe-EEEEEC
Confidence 55666677788888899999984 666553
No 197
>1fpr_A Protein-tyrosine phosphatase 1C; protein tyrosine phosphatase, substrate specificity, residue shift, signaling protein; HET: PTR; 2.50A {Homo sapiens} SCOP: c.45.1.2 PDB: 1gwz_A
Probab=20.23 E-value=66 Score=27.14 Aligned_cols=19 Identities=16% Similarity=0.074 Sum_probs=14.0
Q ss_pred CCCCcEEEEeCCC-hhHHHH
Q 022540 244 DPQKDTYVMCHHG-MRSLQV 262 (295)
Q Consensus 244 ~~~~~ivv~C~~g-~rs~~a 262 (295)
....||+|+|..| +|+...
T Consensus 202 ~~~~pivVHCsaGvGRTGtf 221 (284)
T 1fpr_A 202 PHAGPIIVHSSAGIGRTGTI 221 (284)
T ss_dssp TTCCCEEEESSBSSHHHHHH
T ss_pred CCCCcEEEEcCCCCcHHHHH
Confidence 4678999999876 566543
Done!