Query 022543
Match_columns 295
No_of_seqs 357 out of 3256
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 07:13:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022543.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022543hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iwh_A Rhodanese-like domain p 99.9 2.6E-25 8.7E-30 167.3 9.3 99 185-291 2-100 (103)
2 2lj4_A Peptidyl-prolyl CIS-tra 99.9 5E-25 1.7E-29 168.5 8.6 90 87-176 2-114 (115)
3 3foj_A Uncharacterized protein 99.9 1.1E-24 3.8E-29 163.0 10.0 98 185-290 2-99 (100)
4 4g2p_A Chaperone SURA; structu 99.9 6.7E-25 2.3E-29 166.8 8.5 95 85-179 4-108 (110)
5 3gpk_A PPIC-type peptidyl-prol 99.9 1.1E-24 3.7E-29 165.6 8.4 96 86-181 4-106 (112)
6 3eme_A Rhodanese-like domain p 99.9 2.9E-24 9.8E-29 161.7 10.0 99 185-291 2-100 (103)
7 3i6c_A Peptidyl-prolyl CIS-tra 99.9 3.1E-24 1.1E-28 165.7 8.4 93 84-176 9-122 (123)
8 1jns_A Peptidyl-prolyl CIS-tra 99.9 3.3E-24 1.1E-28 157.9 7.4 89 88-178 2-91 (92)
9 3gk5_A Uncharacterized rhodane 99.9 7.9E-24 2.7E-28 160.7 7.4 99 184-293 3-101 (108)
10 3i2v_A Adenylyltransferase and 99.9 1.9E-24 6.4E-29 168.5 4.0 107 186-295 2-127 (127)
11 2pv1_A Chaperone SURA; surviVa 99.9 1.7E-23 5.7E-28 157.5 8.0 91 88-178 1-102 (103)
12 2rqs_A Parvulin-like peptidyl- 99.9 4.1E-23 1.4E-27 153.5 9.7 90 85-176 5-96 (97)
13 3ui4_A Peptidyl-prolyl CIS-tra 99.9 1.9E-23 6.5E-28 156.2 7.9 90 86-178 4-100 (101)
14 1zk6_A Foldase protein PRSA; a 99.9 1.2E-23 4.1E-28 155.3 6.7 89 87-177 2-92 (93)
15 1m5y_A SurviVal protein, survi 99.9 1.8E-23 6E-28 194.3 7.7 167 13-181 168-366 (408)
16 1gmx_A GLPE protein; transfera 99.9 1.1E-23 3.9E-28 159.8 4.9 99 184-291 4-102 (108)
17 3hix_A ALR3790 protein; rhodan 99.9 9.6E-24 3.3E-28 159.7 4.1 98 191-293 2-99 (106)
18 2kgj_A Peptidyl-prolyl CIS-tra 99.9 1.5E-23 5E-28 157.2 4.5 93 88-181 2-96 (102)
19 3tc5_A Peptidyl-prolyl CIS-tra 99.9 6.4E-23 2.2E-27 166.6 8.6 92 85-176 53-165 (166)
20 1wv9_A Rhodanese homolog TT165 99.9 8.3E-23 2.9E-27 151.1 6.7 91 186-287 3-93 (94)
21 2jzv_A Foldase protein PRSA; p 99.9 1.9E-22 6.5E-27 153.7 8.8 92 85-176 3-110 (111)
22 1tq1_A AT5G66040, senescence-a 99.9 7.1E-23 2.4E-27 160.4 5.8 105 182-291 15-127 (129)
23 3d1p_A Putative thiosulfate su 99.9 2.8E-22 9.7E-27 158.9 9.3 109 183-293 21-138 (139)
24 1qxn_A SUD, sulfide dehydrogen 99.9 1.2E-22 4.1E-27 160.7 6.9 104 183-291 21-127 (137)
25 2hhg_A Hypothetical protein RP 99.9 4.5E-22 1.5E-26 157.7 9.8 108 183-292 20-132 (139)
26 3flh_A Uncharacterized protein 99.9 6.1E-23 2.1E-27 159.6 4.0 103 184-293 14-119 (124)
27 3ilm_A ALR3790 protein; rhodan 99.9 1.2E-22 4.1E-27 161.4 5.5 99 187-290 2-100 (141)
28 1j6y_A Peptidyl-prolyl CIS-tra 99.9 8E-23 2.7E-27 161.5 3.9 93 84-176 21-138 (139)
29 3nhv_A BH2092 protein; alpha-b 99.9 1.3E-21 4.6E-26 156.0 9.9 101 185-291 16-118 (144)
30 1yw5_A Peptidyl prolyl CIS/tra 99.8 4.8E-21 1.6E-25 157.7 8.1 92 85-176 63-176 (177)
31 2k0z_A Uncharacterized protein 99.8 1.9E-21 6.4E-26 148.0 5.0 86 203-291 15-100 (110)
32 1t3k_A Arath CDC25, dual-speci 99.8 1.5E-21 5.3E-26 157.0 4.6 104 184-291 27-139 (152)
33 2jtq_A Phage shock protein E; 99.8 1.4E-21 4.9E-26 141.6 3.0 80 205-287 2-81 (85)
34 3g5j_A Putative ATP/GTP bindin 99.8 3.1E-21 1.1E-25 151.4 3.3 97 185-289 5-132 (134)
35 4f67_A UPF0176 protein LPG2838 99.8 1.9E-20 6.6E-25 162.9 5.3 104 184-291 121-226 (265)
36 2fsx_A RV0390, COG0607: rhodan 99.8 2.4E-20 8.4E-25 149.3 4.0 96 186-284 6-118 (148)
37 3olh_A MST, 3-mercaptopyruvate 99.8 1.6E-19 5.6E-24 161.1 8.5 105 185-293 175-301 (302)
38 1vee_A Proline-rich protein fa 99.8 4.8E-20 1.6E-24 145.2 2.5 106 184-292 4-123 (134)
39 1c25_A CDC25A; hydrolase, cell 99.8 2.1E-19 7.1E-24 145.9 5.5 107 183-290 21-144 (161)
40 1e0c_A Rhodanese, sulfurtransf 99.8 8.4E-19 2.9E-23 154.0 9.9 103 185-291 147-269 (271)
41 1qb0_A Protein (M-phase induce 99.8 4.6E-19 1.6E-23 150.1 5.8 108 182-290 41-166 (211)
42 1e0c_A Rhodanese, sulfurtransf 99.8 2.1E-18 7.1E-23 151.5 9.6 102 186-291 10-127 (271)
43 2a2k_A M-phase inducer phospha 99.8 5.1E-19 1.8E-23 145.5 5.3 108 183-290 22-146 (175)
44 1urh_A 3-mercaptopyruvate sulf 99.8 4.2E-19 1.4E-23 156.7 5.0 103 185-292 152-277 (280)
45 3rfw_A Cell-binding factor 2; 99.7 4.4E-19 1.5E-23 154.3 4.8 112 65-181 90-211 (252)
46 2j6p_A SB(V)-AS(V) reductase; 99.7 3.7E-19 1.3E-23 143.1 3.9 107 184-291 4-120 (152)
47 2vsw_A Dual specificity protei 99.7 6.7E-19 2.3E-23 141.6 5.3 101 185-287 4-127 (153)
48 3op3_A M-phase inducer phospha 99.7 1.1E-18 3.8E-23 147.8 6.8 105 183-287 55-176 (216)
49 1rhs_A Sulfur-substituted rhod 99.7 1.7E-18 5.8E-23 154.1 8.3 102 185-290 160-285 (296)
50 1urh_A 3-mercaptopyruvate sulf 99.7 4.3E-18 1.5E-22 150.2 10.0 102 186-291 5-132 (280)
51 3tp9_A Beta-lactamase and rhod 99.7 3.4E-18 1.2E-22 161.7 9.0 101 183-291 372-472 (474)
52 3hzu_A Thiosulfate sulfurtrans 99.7 1.5E-18 5.3E-23 155.9 5.9 103 185-291 40-157 (318)
53 2ouc_A Dual specificity protei 99.7 9E-19 3.1E-23 138.6 3.3 103 187-290 3-135 (142)
54 3hzu_A Thiosulfate sulfurtrans 99.7 4.6E-18 1.6E-22 152.8 7.9 99 186-290 180-305 (318)
55 2eg4_A Probable thiosulfate su 99.7 7.8E-18 2.7E-22 144.4 8.8 95 186-291 122-228 (230)
56 1uar_A Rhodanese; sulfurtransf 99.7 1E-17 3.6E-22 148.0 9.3 103 185-291 146-280 (285)
57 3aay_A Putative thiosulfate su 99.7 2E-17 6.7E-22 145.7 10.2 99 187-291 146-273 (277)
58 3aay_A Putative thiosulfate su 99.7 4.1E-18 1.4E-22 150.1 5.5 102 186-291 7-123 (277)
59 3f4a_A Uncharacterized protein 99.7 4.2E-19 1.5E-23 145.1 -0.9 108 182-290 28-155 (169)
60 1rhs_A Sulfur-substituted rhod 99.7 3.2E-17 1.1E-21 145.8 10.4 107 185-291 8-140 (296)
61 3tg1_B Dual specificity protei 99.7 3.5E-17 1.2E-21 132.3 9.7 104 183-287 9-142 (158)
62 1uar_A Rhodanese; sulfurtransf 99.7 3.3E-18 1.1E-22 151.2 3.9 103 185-291 8-125 (285)
63 3nrk_A LIC12922; NC domain, pa 99.7 5.8E-18 2E-22 152.6 4.5 109 67-180 141-266 (325)
64 1hzm_A Dual specificity protei 99.7 3.6E-18 1.2E-22 137.4 2.7 101 184-287 15-142 (154)
65 3utn_X Thiosulfate sulfurtrans 99.7 3.1E-17 1E-21 147.2 8.6 105 187-291 186-320 (327)
66 1yt8_A Thiosulfate sulfurtrans 99.7 1.5E-17 5.2E-22 159.6 6.4 103 184-291 6-108 (539)
67 3ics_A Coenzyme A-disulfide re 99.7 3.2E-17 1.1E-21 158.9 7.8 100 182-291 486-585 (588)
68 3ntd_A FAD-dependent pyridine 99.7 4.9E-17 1.7E-21 156.7 8.7 94 183-287 471-564 (565)
69 1m5y_A SurviVal protein, survi 99.7 1.1E-17 3.9E-22 155.1 3.8 113 65-180 131-255 (408)
70 3olh_A MST, 3-mercaptopyruvate 99.7 1.3E-16 4.3E-21 142.4 10.1 107 185-291 22-155 (302)
71 1yt8_A Thiosulfate sulfurtrans 99.7 3.3E-17 1.1E-21 157.2 6.2 100 184-291 376-475 (539)
72 2wlr_A Putative thiosulfate su 99.7 6.3E-17 2.2E-21 150.9 7.5 102 185-290 272-403 (423)
73 2wlr_A Putative thiosulfate su 99.7 1.1E-16 3.7E-21 149.3 8.0 105 186-290 125-247 (423)
74 1okg_A Possible 3-mercaptopyru 99.6 1.3E-16 4.6E-21 146.1 7.0 99 185-290 14-140 (373)
75 1okg_A Possible 3-mercaptopyru 99.6 1.6E-16 5.3E-21 145.6 5.5 84 203-286 173-286 (373)
76 3r2u_A Metallo-beta-lactamase 99.6 2.8E-17 9.6E-22 155.0 0.0 80 203-286 386-465 (466)
77 2eg4_A Probable thiosulfate su 99.6 5E-16 1.7E-20 133.1 4.9 80 203-286 5-98 (230)
78 1whb_A KIAA0055; deubiqutinati 99.6 1.4E-15 4.8E-20 122.7 5.3 102 184-287 14-141 (157)
79 2gwf_A Ubiquitin carboxyl-term 99.6 1.3E-15 4.6E-20 122.8 5.0 103 183-287 18-146 (157)
80 3tp9_A Beta-lactamase and rhod 99.4 4.2E-14 1.4E-18 133.6 4.8 98 183-290 271-369 (474)
81 3rgc_A Possible periplasmic pr 99.4 5.5E-14 1.9E-18 122.0 -0.6 94 66-181 114-209 (252)
82 3utn_X Thiosulfate sulfurtrans 99.3 5.7E-12 2E-16 112.9 9.3 105 184-290 27-157 (327)
83 3r2u_A Metallo-beta-lactamase 99.2 9.5E-12 3.2E-16 117.2 5.9 79 203-285 295-375 (466)
84 2lj4_A Peptidyl-prolyl CIS-tra 98.6 8.3E-09 2.8E-13 78.3 0.1 78 16-94 33-112 (115)
85 4g2p_A Chaperone SURA; structu 98.2 1E-07 3.5E-12 71.7 -0.5 78 19-96 26-105 (110)
86 3i6c_A Peptidyl-prolyl CIS-tra 98.0 2.5E-07 8.6E-12 70.8 -2.4 79 16-95 41-121 (123)
87 3gpk_A PPIC-type peptidyl-prol 98.0 2.4E-07 8.2E-12 69.7 -2.7 91 4-96 9-101 (112)
88 3tc5_A Peptidyl-prolyl CIS-tra 97.9 6.6E-07 2.3E-11 72.1 -2.1 79 16-95 84-164 (166)
89 2pv1_A Chaperone SURA; surviVa 97.8 1.6E-06 5.4E-11 64.2 -1.1 82 12-95 16-99 (103)
90 2jzv_A Foldase protein PRSA; p 97.8 1.4E-06 4.8E-11 65.4 -1.8 75 20-94 32-108 (111)
91 1zk6_A Foldase protein PRSA; a 97.7 1.1E-05 3.7E-10 58.5 1.2 70 24-95 18-90 (93)
92 1j6y_A Peptidyl-prolyl CIS-tra 97.6 2.9E-06 1E-10 66.3 -2.2 79 13-92 54-134 (139)
93 1yw5_A Peptidyl prolyl CIS/tra 97.6 3.5E-06 1.2E-10 68.7 -2.2 78 17-95 96-175 (177)
94 2kgj_A Peptidyl-prolyl CIS-tra 97.6 5.2E-06 1.8E-10 61.3 -1.4 72 22-95 17-90 (102)
95 3ui4_A Peptidyl-prolyl CIS-tra 97.6 1.2E-05 4E-10 59.3 0.5 68 25-95 22-97 (101)
96 2rqs_A Parvulin-like peptidyl- 97.6 1.2E-05 4.1E-10 58.8 0.5 71 24-95 23-95 (97)
97 1jns_A Peptidyl-prolyl CIS-tra 97.5 1.3E-05 4.3E-10 58.0 0.1 70 24-95 17-88 (92)
98 2f46_A Hypothetical protein; s 97.1 0.00058 2E-08 54.1 5.1 81 187-272 30-129 (156)
99 3nrk_A LIC12922; NC domain, pa 96.6 0.00014 4.8E-09 64.9 -2.2 77 19-96 179-262 (325)
100 3rfw_A Cell-binding factor 2; 96.3 0.00071 2.4E-08 57.9 0.3 62 36-97 143-207 (252)
101 1v8c_A MOAD related protein; r 87.8 0.074 2.5E-06 42.4 -0.8 26 205-234 122-147 (168)
102 4erc_A Dual specificity protei 76.9 1.7 5.8E-05 33.0 3.1 68 205-272 37-117 (150)
103 2img_A Dual specificity protei 62.3 4.6 0.00016 30.4 2.7 67 205-271 38-117 (151)
104 1jzt_A Hypothetical 27.5 kDa p 60.5 11 0.00036 31.7 4.8 30 247-277 59-91 (246)
105 2jgn_A DBX, DDX3, ATP-dependen 59.8 9.7 0.00033 30.0 4.3 39 244-283 44-82 (185)
106 3d3k_A Enhancer of mRNA-decapp 59.2 11 0.00037 31.9 4.7 31 246-277 85-118 (259)
107 2nt2_A Protein phosphatase sli 58.8 8.3 0.00028 28.9 3.6 27 245-271 80-109 (145)
108 2hjv_A ATP-dependent RNA helic 58.7 8.6 0.00029 29.5 3.7 37 245-282 34-70 (163)
109 2e0t_A Dual specificity phosph 58.3 10 0.00035 28.6 4.0 28 245-272 84-114 (151)
110 3d3j_A Enhancer of mRNA-decapp 57.4 12 0.0004 32.5 4.7 30 247-277 133-165 (306)
111 2hcm_A Dual specificity protei 57.2 11 0.00038 29.0 4.1 28 244-271 87-117 (164)
112 2o8n_A APOA-I binding protein; 57.1 12 0.00041 31.8 4.6 31 246-277 79-112 (265)
113 1t5i_A C_terminal domain of A 55.8 10 0.00035 29.5 3.7 37 245-282 30-66 (172)
114 2rb4_A ATP-dependent RNA helic 55.3 8.9 0.0003 29.8 3.3 36 245-281 33-68 (175)
115 2r0b_A Serine/threonine/tyrosi 53.8 11 0.00038 28.5 3.6 29 244-272 88-119 (154)
116 1zzw_A Dual specificity protei 53.5 13 0.00045 27.9 3.9 27 245-271 82-111 (149)
117 1wrm_A Dual specificity phosph 53.3 11 0.00039 28.9 3.6 28 244-271 81-111 (165)
118 1yz4_A DUSP15, dual specificit 53.2 12 0.00042 28.5 3.8 28 245-272 83-113 (160)
119 1xri_A AT1G05000; structural g 52.8 9.5 0.00033 28.8 3.0 28 245-272 91-120 (151)
120 1fuk_A Eukaryotic initiation f 52.2 13 0.00045 28.4 3.8 37 245-282 29-65 (165)
121 2esb_A Dual specificity protei 50.9 15 0.0005 29.2 4.0 29 244-272 95-126 (188)
122 3rgo_A Protein-tyrosine phosph 50.2 13 0.00046 27.9 3.6 29 244-272 87-118 (157)
123 3rgc_A Possible periplasmic pr 48.9 11 0.00036 31.5 2.9 46 53-98 160-206 (252)
124 1rxd_A Protein tyrosine phosph 47.6 18 0.00063 27.1 4.0 28 244-271 94-123 (159)
125 2hxp_A Dual specificity protei 46.9 17 0.00057 27.7 3.6 27 245-271 84-113 (155)
126 3eaq_A Heat resistant RNA depe 45.9 15 0.00052 29.6 3.4 37 245-282 30-66 (212)
127 3czc_A RMPB; alpha/beta sandwi 45.1 33 0.0011 24.5 4.8 26 247-272 19-49 (110)
128 3nbm_A PTS system, lactose-spe 44.7 17 0.00058 26.2 3.1 33 245-278 5-41 (108)
129 3ohg_A Uncharacterized protein 43.9 20 0.00069 30.7 3.9 26 256-281 218-243 (285)
130 2wgp_A Dual specificity protei 43.5 19 0.00067 28.5 3.6 27 245-271 102-131 (190)
131 2oud_A Dual specificity protei 43.4 20 0.00068 28.0 3.6 27 245-271 86-115 (177)
132 2y96_A Dual specificity phosph 41.8 25 0.00084 28.7 4.1 28 244-271 137-167 (219)
133 2pq5_A Dual specificity protei 40.5 26 0.00088 28.1 4.0 27 245-271 130-159 (205)
134 3f81_A Dual specificity protei 40.1 24 0.00081 27.5 3.6 27 246-272 115-144 (183)
135 2l2q_A PTS system, cellobiose- 39.7 11 0.00037 27.1 1.4 28 245-272 3-34 (109)
136 3ezz_A Dual specificity protei 39.5 27 0.00092 25.9 3.7 27 245-271 80-109 (144)
137 2g6z_A Dual specificity protei 38.5 27 0.00091 28.4 3.7 28 244-271 81-111 (211)
138 3s4e_A Dual specificity protei 38.1 28 0.00096 25.9 3.6 29 244-272 79-110 (144)
139 2p6n_A ATP-dependent RNA helic 38.1 24 0.00081 27.9 3.3 35 246-281 54-88 (191)
140 3fwz_A Inner membrane protein 37.3 40 0.0014 24.8 4.4 30 249-279 9-38 (140)
141 3cm3_A Late protein H1, dual s 36.8 31 0.0011 26.7 3.8 28 245-272 107-137 (176)
142 3rof_A Low molecular weight pr 35.6 26 0.00091 27.0 3.1 39 247-285 7-50 (158)
143 3emu_A Leucine rich repeat and 34.8 39 0.0013 25.8 4.0 28 245-272 86-116 (161)
144 3to5_A CHEY homolog; alpha(5)b 34.7 63 0.0022 23.9 5.1 42 244-285 10-51 (134)
145 1e2b_A Enzyme IIB-cellobiose; 34.3 21 0.00071 25.6 2.2 30 247-277 4-37 (106)
146 3rss_A Putative uncharacterize 34.0 31 0.001 32.1 3.8 32 245-277 51-85 (502)
147 1tvm_A PTS system, galactitol- 34.0 36 0.0012 24.5 3.4 27 246-272 21-52 (113)
148 4h3k_B RNA polymerase II subun 33.6 46 0.0016 27.0 4.2 29 248-277 27-56 (214)
149 2j16_A SDP-1, tyrosine-protein 33.3 43 0.0015 26.4 4.1 28 244-271 115-145 (182)
150 3s4o_A Protein tyrosine phosph 33.2 44 0.0015 25.1 4.1 28 245-272 108-138 (167)
151 1u14_A Hypothetical UPF0244 pr 32.1 32 0.0011 27.1 3.0 40 107-146 110-150 (172)
152 2yjt_D ATP-dependent RNA helic 37.7 10 0.00034 29.3 0.0 38 245-283 29-66 (170)
153 2v1x_A ATP-dependent DNA helic 30.8 36 0.0012 32.3 3.7 36 245-281 266-301 (591)
154 2q05_A Late protein H1, dual s 30.4 47 0.0016 26.3 3.9 28 245-272 124-154 (195)
155 1oyw_A RECQ helicase, ATP-depe 30.3 37 0.0013 31.5 3.7 37 245-282 235-271 (523)
156 2i4i_A ATP-dependent RNA helic 29.7 36 0.0012 29.9 3.4 39 243-282 273-311 (417)
157 3llv_A Exopolyphosphatase-rela 29.5 64 0.0022 23.5 4.4 29 250-279 9-37 (141)
158 3i32_A Heat resistant RNA depe 29.3 37 0.0013 29.1 3.3 36 245-281 27-62 (300)
159 1p8a_A Protein tyrosine phosph 28.3 8.3 0.00028 29.4 -1.0 39 247-285 5-44 (146)
160 1vkr_A Mannitol-specific PTS s 27.6 38 0.0013 25.0 2.6 26 246-271 13-43 (125)
161 1zwy_A Hypothetical UPF0244 pr 27.4 35 0.0012 27.3 2.5 41 106-146 119-160 (185)
162 1xti_A Probable ATP-dependent 27.0 49 0.0017 28.6 3.8 36 245-281 249-284 (391)
163 1s2m_A Putative ATP-dependent 25.5 47 0.0016 28.9 3.4 37 245-282 257-293 (400)
164 1hv8_A Putative ATP-dependent 25.4 55 0.0019 27.8 3.8 37 244-281 236-272 (367)
165 1fpz_A Cyclin-dependent kinase 25.0 59 0.002 25.9 3.6 27 245-271 132-162 (212)
166 1jl3_A Arsenate reductase; alp 24.9 69 0.0024 23.8 3.8 36 248-283 5-41 (139)
167 2g1u_A Hypothetical protein TM 23.7 1.1E+02 0.0037 22.7 4.8 30 249-279 21-50 (155)
168 3pey_A ATP-dependent RNA helic 23.6 55 0.0019 28.2 3.5 36 245-281 242-277 (395)
169 3rh0_A Arsenate reductase; oxi 23.0 84 0.0029 23.8 3.9 36 247-282 21-57 (148)
170 3fht_A ATP-dependent RNA helic 22.9 56 0.0019 28.4 3.4 36 245-281 265-300 (412)
171 2j0s_A ATP-dependent RNA helic 22.3 59 0.002 28.4 3.4 36 246-282 276-311 (410)
172 4etn_A LMPTP, low molecular we 22.0 30 0.001 27.5 1.2 38 247-285 35-77 (184)
173 1jf8_A Arsenate reductase; ptp 21.7 88 0.003 23.0 3.7 37 247-283 4-41 (131)
174 2l17_A Synarsc, arsenate reduc 21.1 1E+02 0.0035 22.7 4.0 35 248-282 6-41 (134)
175 1lss_A TRK system potassium up 21.1 1E+02 0.0035 21.9 4.1 29 250-279 7-35 (140)
176 3rz2_A Protein tyrosine phosph 20.9 80 0.0027 24.6 3.6 28 244-271 115-144 (189)
177 3n8i_A Low molecular weight ph 20.5 63 0.0022 24.7 2.8 40 246-285 5-50 (157)
178 2der_A TRNA-specific 2-thiouri 20.5 71 0.0024 28.4 3.5 28 245-272 16-43 (380)
179 1wp9_A ATP-dependent RNA helic 20.5 95 0.0032 27.3 4.4 35 244-279 359-393 (494)
180 1wy5_A TILS, hypothetical UPF0 20.3 1.2E+02 0.0042 25.8 5.0 27 243-269 21-47 (317)
181 4fak_A Ribosomal RNA large sub 20.1 60 0.0021 25.2 2.6 46 240-285 68-118 (163)
No 1
>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A
Probab=99.92 E-value=2.6e-25 Score=167.27 Aligned_cols=99 Identities=31% Similarity=0.591 Sum_probs=88.0
Q ss_pred cccchhHHHhhhcCCCccccceEEeccChhhhhccCCCCceecCcccccCCCCCccccCCCCCcEEEEeCCChhHHHHHH
Q 022543 185 QDIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSWGPDITVKFDPQKDTYVMCHHGMRSLQVAQ 264 (295)
Q Consensus 185 ~~is~~el~~~l~~~~~~~~~~liDvR~~~e~~~ghIpgAinip~~~l~~~~~~~~~~~~~~~~iv~~C~~g~rs~~a~~ 264 (295)
..++++++++.+.+. +...+||||++.||+.||||||+|||+..|... +..++++++||+||.+|.||..++.
T Consensus 2 k~Is~~el~~~l~~~---~~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~~----~~~l~~~~~ivv~C~~G~rS~~aa~ 74 (103)
T 3iwh_A 2 KSITTDELKNKLLES---KPVQIVDVRTDEETAMGYIPNAKLIPMDTIPDN----LNSFNKNEIYYIVCAGGVRSAKVVE 74 (103)
T ss_dssp CEECHHHHHHGGGSS---SCCEEEECSCHHHHTTCBCTTCEECCGGGGGGC----GGGCCTTSEEEEECSSSSHHHHHHH
T ss_pred CCcCHHHHHHHHhCC---CCeEEEECCChhHHhcCccCCcccCcccchhhh----hhhhcCCCeEEEECCCCHHHHHHHH
Confidence 458899999988764 568899999999999999999999999988654 4557899999999999999999999
Q ss_pred HHHHcCCCCeEEecchHHHcccccCCC
Q 022543 265 WLQTQGFRRVFNVSGGIHAYATKVDPS 291 (295)
Q Consensus 265 ~L~~~G~~~v~~l~GG~~~W~~~~~p~ 291 (295)
.|++.||+++ +|.||+.+|..++.|.
T Consensus 75 ~L~~~G~~~~-~l~GG~~~W~~~g~pv 100 (103)
T 3iwh_A 75 YLEANGIDAV-NVEGGMHAWGDEGLEI 100 (103)
T ss_dssp HHHTTTCEEE-EETTHHHHHCSSSCBC
T ss_pred HHHHcCCCEE-EecChHHHHHHCCCcc
Confidence 9999999654 7999999999998874
No 2
>2lj4_A Peptidyl-prolyl CIS-trans isomerase/rotamase, PUT; tbpin1; NMR {Trypanosoma brucei}
Probab=99.91 E-value=5e-25 Score=168.47 Aligned_cols=90 Identities=26% Similarity=0.496 Sum_probs=83.2
Q ss_pred CceEEEeeEEeccc---------------------hHHHHHHHHHHhCCCC-cHHHHHHHhCCCCCccCCCcccceeCCC
Q 022543 87 DREILVQHLLVKED---------------------DLNLLSELQRRVSQGK-DLSDLAVEHSICPSKGEGGMLGWVRKGQ 144 (295)
Q Consensus 87 ~~~~~~~~Il~~~~---------------------~~~~a~~i~~~i~~g~-~F~~~a~~~S~d~~~~~gG~lg~~~~~~ 144 (295)
+++|+++||||+.+ +++++++++++|++|+ +|+++|++||+++++.+||+|||+..++
T Consensus 2 pe~vrasHILi~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~~i~~g~~~F~~lA~~~Sd~~sa~~GGdLG~~~~~~ 81 (115)
T 2lj4_A 2 SEKLRAAHLLVKFSGSRNPVSRRTGDSTADVTYEDAIKELQKWSQRIASGEVSFEEAASQRSDCGSYASGGDLGFFSSGE 81 (115)
T ss_dssp CCEEEEEEEEECCTTSSCCCCTTTSSCCTTSCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHCCSGGGGTTSEEEEEETTS
T ss_pred CCcEEEEEEEEecCCccChhhhhhccccccccHHHHHHHHHHHHHHHHcCchhHHHHHHHhCCCcccccCCccceecCCC
Confidence 68999999999632 4577999999999996 9999999999888999999999999999
Q ss_pred CcHHHHHHHhcCCCCcee-eeeecCceeeeehh
Q 022543 145 LVPEFEEVAFTTPLNKVA-RCKTKFGWHLLQVL 176 (295)
Q Consensus 145 ~~~~~~~~~~~l~~g~is-pv~~~~G~~ii~v~ 176 (295)
|+++|.+++|+|++|++| ||+|++|||||++.
T Consensus 82 ~~~~f~~a~~~l~~GeiS~pv~t~~G~HIIkl~ 114 (115)
T 2lj4_A 82 MMKPFEDAVRALKIGDISPIVQTDSGLHIIKRL 114 (115)
T ss_dssp SCHHHHHHHTTSCBTCBCCCEECSSSEEEEEEC
T ss_pred CCchHHHHHhcCCCCCCCCcEEeCCeEEEEEEe
Confidence 999999999999999999 99999999999864
No 3
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=99.91 E-value=1.1e-24 Score=163.05 Aligned_cols=98 Identities=29% Similarity=0.555 Sum_probs=87.6
Q ss_pred cccchhHHHhhhcCCCccccceEEeccChhhhhccCCCCceecCcccccCCCCCccccCCCCCcEEEEeCCChhHHHHHH
Q 022543 185 QDIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSWGPDITVKFDPQKDTYVMCHHGMRSLQVAQ 264 (295)
Q Consensus 185 ~~is~~el~~~l~~~~~~~~~~liDvR~~~e~~~ghIpgAinip~~~l~~~~~~~~~~~~~~~~iv~~C~~g~rs~~a~~ 264 (295)
..++++++.+++.+. .+..+||||++.||..||||||+|+|+..+... +..++++++||+||.+|.||..++.
T Consensus 2 ~~is~~el~~~l~~~---~~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~~----~~~l~~~~~ivvyC~~g~rs~~a~~ 74 (100)
T 3foj_A 2 ESITVTELKEKILDA---NPVNIVDVRTDQETAMGIIPGAETIPMNSIPDN----LNYFNDNETYYIICKAGGRSAQVVQ 74 (100)
T ss_dssp CEECHHHHHHGGGSS---SCCEEEECSCHHHHTTCBCTTCEECCGGGGGGC----GGGSCTTSEEEEECSSSHHHHHHHH
T ss_pred CccCHHHHHHHHhcC---CCcEEEECCCHHHHhcCcCCCCEECCHHHHHHH----HHhCCCCCcEEEEcCCCchHHHHHH
Confidence 357889999988543 578999999999999999999999999988654 4557899999999999999999999
Q ss_pred HHHHcCCCCeEEecchHHHcccccCC
Q 022543 265 WLQTQGFRRVFNVSGGIHAYATKVDP 290 (295)
Q Consensus 265 ~L~~~G~~~v~~l~GG~~~W~~~~~p 290 (295)
.|+..|| +|++|+||+.+|..++.|
T Consensus 75 ~L~~~G~-~v~~l~GG~~~W~~~g~p 99 (100)
T 3foj_A 75 YLEQNGV-NAVNVEGGMDEFGDEGLE 99 (100)
T ss_dssp HHHTTTC-EEEEETTHHHHHCSSSCB
T ss_pred HHHHCCC-CEEEecccHHHHHHcCCC
Confidence 9999999 999999999999998876
No 4
>4g2p_A Chaperone SURA; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, pcsep; 1.82A {Salmonella enterica subsp}
Probab=99.91 E-value=6.7e-25 Score=166.77 Aligned_cols=95 Identities=28% Similarity=0.515 Sum_probs=88.6
Q ss_pred CCCceEEEeeEEeccc-------hHHHHHHHHHHhCCCC-cHHHHHHHhCCCC-CccCCCcccceeCCCCcHHHHHHHhc
Q 022543 85 GGDREILVQHLLVKED-------DLNLLSELQRRVSQGK-DLSDLAVEHSICP-SKGEGGMLGWVRKGQLVPEFEEVAFT 155 (295)
Q Consensus 85 ~~~~~~~~~~Il~~~~-------~~~~a~~i~~~i~~g~-~F~~~a~~~S~d~-~~~~gG~lg~~~~~~~~~~~~~~~~~ 155 (295)
...++|+++||||+.. ++++|++++++|++|+ +|+++|++||+|+ ++.+||+|||+..+.++++|.+++++
T Consensus 4 ~~~~~v~~~hIli~~~~~~~~~~a~~~a~~i~~~l~~G~~~F~~lA~~~S~d~~s~~~GG~lG~~~~~~l~~~f~~a~~~ 83 (110)
T 4g2p_A 4 ISVTEVHARHILLKPSPIMNDQQARLKLEEIAADIKSGKTTFAAAAKEYSQDPGSANQGGDLGWATPDIFDPAFRDALTK 83 (110)
T ss_dssp CCCEEEEEEEEEECCCSSSCHHHHHHHHHHHHHHHHTTSSCHHHHHHHHCCCTTTGGGTTEEEEECGGGSCHHHHHHHHT
T ss_pred ccccEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHcCcccHHHHHHHhCCCccccccccccCeecccccCHHHHHHHHc
Confidence 5678999999999853 4678999999999999 9999999999999 99999999999999999999999999
Q ss_pred CCCCcee-eeeecCceeeeehhhhh
Q 022543 156 TPLNKVA-RCKTKFGWHLLQVLSER 179 (295)
Q Consensus 156 l~~g~is-pv~~~~G~~ii~v~~~~ 179 (295)
|++|++| ||++++||||+++.+++
T Consensus 84 l~~Geis~pv~t~~G~hIikv~~~r 108 (110)
T 4g2p_A 84 LHKGQISAPVHSSFGWHLIELLDTR 108 (110)
T ss_dssp CCTTCBCCCEEETTEEEEEEEEEEE
T ss_pred CCCCCcCccEEECCEEEEEEEEEEe
Confidence 9999999 99999999999988765
No 5
>3gpk_A PPIC-type peptidyl-prolyl CIS-trans isomerase; rotamase,ppiase domain, 11189O3,PSI2., structural genomics; 1.55A {Novosphingobium aromaticivorans}
Probab=99.91 E-value=1.1e-24 Score=165.60 Aligned_cols=96 Identities=22% Similarity=0.380 Sum_probs=88.5
Q ss_pred CCceEEEeeEEeccc------hHHHHHHHHHHhCCCCcHHHHHHHhCCCCCccCCCcccceeCCCCcHHHHHHHhcCCCC
Q 022543 86 GDREILVQHLLVKED------DLNLLSELQRRVSQGKDLSDLAVEHSICPSKGEGGMLGWVRKGQLVPEFEEVAFTTPLN 159 (295)
Q Consensus 86 ~~~~~~~~~Il~~~~------~~~~a~~i~~~i~~g~~F~~~a~~~S~d~~~~~gG~lg~~~~~~~~~~~~~~~~~l~~g 159 (295)
.+++|+++||||+.+ ++++|++++++|++|++|++||++||+|+++.+||+|||+..++++++|.+++|+|++|
T Consensus 4 ~~~~~~v~hIli~~~~~~~~~a~~~A~~i~~~l~~G~~F~~lA~~~S~d~sa~~GGdlG~~~~~~l~~~f~~a~~~l~~G 83 (112)
T 3gpk_A 4 GTEEYRIGEIFLAATEENKPQVFANAEKIVEQLKQGGSFVAYARQYSEASTAAVGGDLGWIRLAQLPTELATTAASMGPG 83 (112)
T ss_dssp -CCEEEEEEEEEECCGGGHHHHHHHHHHHHHHHHTTCCHHHHHHHHCCSTTGGGTTEEEEECGGGSCHHHHHHHHHCCTT
T ss_pred CCcEEEEEEEEEeCChhhHHHHHHHHHHHHHHHHCCCCHHHHHHHhCCCcchhcCcccceEcccccCHHHHHHHHhCCCC
Confidence 467999999999854 35779999999999999999999999999999999999999999999999999999999
Q ss_pred cee-eeeecCceeeeehhhhhhh
Q 022543 160 KVA-RCKTKFGWHLLQVLSEREA 181 (295)
Q Consensus 160 ~is-pv~~~~G~~ii~v~~~~~~ 181 (295)
++| ||++++||||+++.+++..
T Consensus 84 eiS~pv~t~~G~hIikv~~~~~~ 106 (112)
T 3gpk_A 84 QLAGPVEIRGGFSILYLIDKREG 106 (112)
T ss_dssp CEEEEEEETTEEEEEEEEEEECC
T ss_pred CccceEEECCEEEEEEEEeEecc
Confidence 999 9999999999999886653
No 6
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=99.91 E-value=2.9e-24 Score=161.68 Aligned_cols=99 Identities=30% Similarity=0.582 Sum_probs=88.0
Q ss_pred cccchhHHHhhhcCCCccccceEEeccChhhhhccCCCCceecCcccccCCCCCccccCCCCCcEEEEeCCChhHHHHHH
Q 022543 185 QDIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSWGPDITVKFDPQKDTYVMCHHGMRSLQVAQ 264 (295)
Q Consensus 185 ~~is~~el~~~l~~~~~~~~~~liDvR~~~e~~~ghIpgAinip~~~l~~~~~~~~~~~~~~~~iv~~C~~g~rs~~a~~ 264 (295)
..++++++.+++.+. .+..+||||++.||..||||||+|+|+..+... +..++++++||+||.+|.||..++.
T Consensus 2 ~~is~~el~~~l~~~---~~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~~----~~~l~~~~~iv~yC~~g~rs~~a~~ 74 (103)
T 3eme_A 2 KSITTDELKNKLLES---KPVQIVDVRTDEETAMGYIPNAKLIPMDTIPDN----LNSFNKNEIYYIVCAGGVRSAKVVE 74 (103)
T ss_dssp CEECHHHHHHGGGSS---SCCEEEECSCHHHHTTCBCTTCEECCGGGGGGC----GGGCCTTSEEEEECSSSSHHHHHHH
T ss_pred CccCHHHHHHHHhcC---CCCEEEECCCHHHHhcCcCCCCEEcCHHHHHHH----HHhCCCCCeEEEECCCChHHHHHHH
Confidence 357889999988543 578999999999999999999999999988654 4456899999999999999999999
Q ss_pred HHHHcCCCCeEEecchHHHcccccCCC
Q 022543 265 WLQTQGFRRVFNVSGGIHAYATKVDPS 291 (295)
Q Consensus 265 ~L~~~G~~~v~~l~GG~~~W~~~~~p~ 291 (295)
.|+..|| +|++|+||+.+|...+.|.
T Consensus 75 ~L~~~G~-~v~~l~GG~~~W~~~g~p~ 100 (103)
T 3eme_A 75 YLEANGI-DAVNVEGGMHAWGDEGLEI 100 (103)
T ss_dssp HHHTTTC-EEEEETTHHHHHCSSSCBC
T ss_pred HHHHCCC-CeEEeCCCHHHHHHCCCcC
Confidence 9999999 9999999999999888775
No 7
>3i6c_A Peptidyl-prolyl CIS-trans isomerase NIMA- interacting 1; SBDD, small molecule, ppiase, cell cycle, nucleus, phosphoprotein, rotamase; HET: GIA; 1.30A {Homo sapiens} PDB: 3ik8_A 3ikd_A* 3ikg_A* 3jyj_A* 3kac_A* 1nmw_A
Probab=99.90 E-value=3.1e-24 Score=165.71 Aligned_cols=93 Identities=28% Similarity=0.471 Sum_probs=83.4
Q ss_pred CCCCceEEEeeEEecc-------------------chHHHHHHHHHHhCCC-CcHHHHHHHhCCCCCccCCCcccceeCC
Q 022543 84 GGGDREILVQHLLVKE-------------------DDLNLLSELQRRVSQG-KDLSDLAVEHSICPSKGEGGMLGWVRKG 143 (295)
Q Consensus 84 ~~~~~~~~~~~Il~~~-------------------~~~~~a~~i~~~i~~g-~~F~~~a~~~S~d~~~~~gG~lg~~~~~ 143 (295)
+..+++|+++||||+. ++++.+++|+++|++| ++|++||++||+|+++.+||+|||+..+
T Consensus 9 ~~~~~~v~~~HILi~~~~~~~p~~~~~~~~~~~~~~A~~~~~~i~~~l~~G~~~F~~lA~~~S~~~sa~~GGdLG~~~~~ 88 (123)
T 3i6c_A 9 QGEPARVRCSHLLVKHSQSRRPSSWRQEQITRTQEEALELINGYIQKIKSGEEDFESLASQFSDCSSAKARGDLGAFSRG 88 (123)
T ss_dssp --CCSEEEEEEEEECCTTSSSCCBTTBSSCCCCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHCSSGGGGGTTEEEEEETT
T ss_pred cCCCcEEEEEEEEEecCCccCccccchhhhhhHHHHHHHHHHHHHHHHHcCcccHHHHHHHhCCCchhhhCCceeeEcCC
Confidence 4678999999999983 2356677788899999 6999999999998899999999999999
Q ss_pred CCcHHHHHHHhcCCCCcee-eeeecCceeeeehh
Q 022543 144 QLVPEFEEVAFTTPLNKVA-RCKTKFGWHLLQVL 176 (295)
Q Consensus 144 ~~~~~~~~~~~~l~~g~is-pv~~~~G~~ii~v~ 176 (295)
+|+++|.+++|+|++|++| ||++++||||+++.
T Consensus 89 ~l~~~f~~a~f~l~~GeiS~pv~t~~G~hIi~v~ 122 (123)
T 3i6c_A 89 QMQKPFEDASFALRTGEMSGPVFTDSGIHIILRT 122 (123)
T ss_dssp TSCHHHHHHHHHSCTTCBCSCEEETTEEEEEEEC
T ss_pred CCCHHHHHHHHhCCCCCccccEEECCEEEEEEEe
Confidence 9999999999999999999 99999999999875
No 8
>1jns_A Peptidyl-prolyl CIS-trans isomerase C; alpha-beta sandwich, CIS peptide bond; NMR {Escherichia coli} SCOP: d.26.1.1 PDB: 1jnt_A
Probab=99.90 E-value=3.3e-24 Score=157.92 Aligned_cols=89 Identities=40% Similarity=0.756 Sum_probs=84.1
Q ss_pred ceEEEeeEEeccchHHHHHHHHHHhCCCCcHHHHHHHhCCCCCccCCCcccceeCCCCcHHHHHHHhcCCCCcee-eeee
Q 022543 88 REILVQHLLVKEDDLNLLSELQRRVSQGKDLSDLAVEHSICPSKGEGGMLGWVRKGQLVPEFEEVAFTTPLNKVA-RCKT 166 (295)
Q Consensus 88 ~~~~~~~Il~~~~~~~~a~~i~~~i~~g~~F~~~a~~~S~d~~~~~gG~lg~~~~~~~~~~~~~~~~~l~~g~is-pv~~ 166 (295)
++++++||+++.+++ |++++++|++|++|+++|++||+|+++.+||+|||+..++++++|.+++++|++|++| ||++
T Consensus 2 ~~~~~~hIl~~~~~~--A~~i~~~l~~g~~F~~lA~~~S~~~s~~~gGdlg~~~~~~l~~~f~~a~~~l~~G~is~pv~t 79 (92)
T 1jns_A 2 KTAAALHILVKEEKL--ALDLLEQIKNGADFGKLAKKHSICPSGKRGGDLGEFRQGQMVPAFDKVVFSCPVLEPTGPLHT 79 (92)
T ss_dssp CEEEEEEEEESSHHH--HHHHHHHHHHTCCHHHHHHHHHCSTTTTTGGGCCEEETTSSCHHHHHHHHHSCTTCCEEEEEE
T ss_pred CEEEEEEEEeCCHHH--HHHHHHHHHCCCCHHHHHHHhCCCcchhcCCeeeEEcCcccCHHHHHHHHhCCCCCcCCcEEE
Confidence 579999999998755 9999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred cCceeeeehhhh
Q 022543 167 KFGWHLLQVLSE 178 (295)
Q Consensus 167 ~~G~~ii~v~~~ 178 (295)
++||||+++.++
T Consensus 80 ~~G~hIi~v~~~ 91 (92)
T 1jns_A 80 QFGYHIIKVLYR 91 (92)
T ss_dssp TTEEEEEEEECC
T ss_pred CCEEEEEEEEee
Confidence 999999988754
No 9
>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}
Probab=99.89 E-value=7.9e-24 Score=160.69 Aligned_cols=99 Identities=24% Similarity=0.467 Sum_probs=87.4
Q ss_pred ccccchhHHHhhhcCCCccccceEEeccChhhhhccCCCCceecCcccccCCCCCccccCCCCCcEEEEeCCChhHHHHH
Q 022543 184 LQDIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSWGPDITVKFDPQKDTYVMCHHGMRSLQVA 263 (295)
Q Consensus 184 ~~~is~~el~~~l~~~~~~~~~~liDvR~~~e~~~ghIpgAinip~~~l~~~~~~~~~~~~~~~~iv~~C~~g~rs~~a~ 263 (295)
...++++++.+++.+ ..+||||++.||..||||||+|+|+..+... +..++++++||+||.+|.||..++
T Consensus 3 ~~~is~~el~~~l~~------~~iiDvR~~~e~~~ghIpgA~~ip~~~l~~~----~~~l~~~~~ivvyC~~G~rs~~aa 72 (108)
T 3gk5_A 3 YRSINAADLYENIKA------YTVLDVREPFELIFGSIANSINIPISELREK----WKILERDKKYAVICAHGNRSAAAV 72 (108)
T ss_dssp CCEECHHHHHHTTTT------CEEEECSCHHHHTTCBCTTCEECCHHHHHHH----GGGSCTTSCEEEECSSSHHHHHHH
T ss_pred ccEeCHHHHHHHHcC------CEEEECCCHHHHhcCcCCCCEEcCHHHHHHH----HHhCCCCCeEEEEcCCCcHHHHHH
Confidence 345888899888753 7899999999999999999999999988543 445689999999999999999999
Q ss_pred HHHHHcCCCCeEEecchHHHcccccCCCCC
Q 022543 264 QWLQTQGFRRVFNVSGGIHAYATKVDPSIP 293 (295)
Q Consensus 264 ~~L~~~G~~~v~~l~GG~~~W~~~~~p~~p 293 (295)
+.|+..|| +|++|+||+.+|.+++.|..+
T Consensus 73 ~~L~~~G~-~v~~l~GG~~~W~~~~~~~~~ 101 (108)
T 3gk5_A 73 EFLSQLGL-NIVDVEGGIQSWIEEGYPVVL 101 (108)
T ss_dssp HHHHTTTC-CEEEETTHHHHHHHTTCCCBC
T ss_pred HHHHHcCC-CEEEEcCcHHHHHHcCCCCCC
Confidence 99999999 999999999999998887543
No 10
>3i2v_A Adenylyltransferase and sulfurtransferase MOCS3; rhodanese, UBA4, structural genomics, ubiquitin biology, structural genomics consortium, SGC; 1.25A {Homo sapiens}
Probab=99.89 E-value=1.9e-24 Score=168.54 Aligned_cols=107 Identities=25% Similarity=0.404 Sum_probs=89.5
Q ss_pred ccchhHHHhhhcCCCccccceEEeccChhhhhccCCCCceecCcccccCCCCCccc-------------cCCCCCcEEEE
Q 022543 186 DIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSWGPDITV-------------KFDPQKDTYVM 252 (295)
Q Consensus 186 ~is~~el~~~l~~~~~~~~~~liDvR~~~e~~~ghIpgAinip~~~l~~~~~~~~~-------------~~~~~~~iv~~ 252 (295)
+++++++.+++.+. .+.++||||++.||..||||||+|||+..+......... ..+++++||+|
T Consensus 2 ~is~~el~~~l~~~---~~~~liDvR~~~e~~~ghIpgA~~ip~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ivv~ 78 (127)
T 3i2v_A 2 RVSVTDYKRLLDSG---AFHLLLDVRPQVEVDICRLPHALHIPLKHLERRDAESLKLLKEAIWEEKQGTQEGAAVPIYVI 78 (127)
T ss_dssp EECHHHHHHHHHHT---CCCEEEECSCHHHHHHCCCTTSEECCHHHHHTTCHHHHHHHHHHHHHHHTTC---CCEEEEEE
T ss_pred CCCHHHHHHHHhCC---CCeEEEECCCHHHhhheecCCceeCChHHHhhhhhhhHHHHHHHHhhhcccccCCCCCeEEEE
Confidence 47888999888753 358899999999999999999999999887654332211 12345599999
Q ss_pred eCCChhHHHHHHHHHHc------CCCCeEEecchHHHcccccCCCCCCC
Q 022543 253 CHHGMRSLQVAQWLQTQ------GFRRVFNVSGGIHAYATKVDPSIPTY 295 (295)
Q Consensus 253 C~~g~rs~~a~~~L~~~------G~~~v~~l~GG~~~W~~~~~p~~p~~ 295 (295)
|.+|.||..++..|+.. ||.+|++|+||+.+|..+.+|++|.|
T Consensus 79 C~~G~rs~~a~~~L~~~gg~~~~G~~~v~~l~GG~~~W~~~~~~~~p~y 127 (127)
T 3i2v_A 79 CKLGNDSQKAVKILQSLSAAQELDPLTVRDVVGGLMAWAAKIDGTFPQY 127 (127)
T ss_dssp CSSSSHHHHHHHHHHHHHHTTSSSCEEEEEETTHHHHHHHHTCTTSCCC
T ss_pred cCCCCcHHHHHHHHHHhhccccCCCceEEEecCCHHHHHHhcCCCCCCC
Confidence 99999999999999998 68899999999999999999999998
No 11
>2pv1_A Chaperone SURA; surviVal protein A, peptidyl-prolyl CIS-trans isomerase domain, peptide, complex; 1.30A {Escherichia coli} SCOP: d.26.1.1 PDB: 2pv2_A
Probab=99.89 E-value=1.7e-23 Score=157.46 Aligned_cols=91 Identities=23% Similarity=0.387 Sum_probs=84.2
Q ss_pred ceEEEeeEEeccc----------hHHHHHHHHHHhCCCCcHHHHHHHhCCCCCccCCCcccceeCCCCcHHHHHHHhcCC
Q 022543 88 REILVQHLLVKED----------DLNLLSELQRRVSQGKDLSDLAVEHSICPSKGEGGMLGWVRKGQLVPEFEEVAFTTP 157 (295)
Q Consensus 88 ~~~~~~~Il~~~~----------~~~~a~~i~~~i~~g~~F~~~a~~~S~d~~~~~gG~lg~~~~~~~~~~~~~~~~~l~ 157 (295)
++|+++||||+.. ++++|++++++|++|++|+++|++||+|+++.+||+|||+..+.++++|.+++++|+
T Consensus 1 ~~~~~~hIli~~~~~~~~~~~~~a~~~a~~i~~~l~~g~~F~~lA~~~S~~~s~~~gG~lg~~~~~~l~~~f~~a~~~l~ 80 (103)
T 2pv1_A 1 TELNLSHILIPLPENPTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQALSTAK 80 (103)
T ss_dssp CCEEEEEEEEECCSSCCHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHCCSTTGGGTTEEEEECGGGSCHHHHHHTTTCC
T ss_pred CcEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHhCCCcccccCCccceEchhhcCHHHHHHHHcCC
Confidence 3699999999743 467799999999999999999999999999999999999999999999999999999
Q ss_pred CCcee-eeeecCceeeeehhhh
Q 022543 158 LNKVA-RCKTKFGWHLLQVLSE 178 (295)
Q Consensus 158 ~g~is-pv~~~~G~~ii~v~~~ 178 (295)
+|++| ||++++||||+++.++
T Consensus 81 ~G~is~pv~t~~G~hii~v~~~ 102 (103)
T 2pv1_A 81 KGDIVGPIRSGVGFHILKVNDL 102 (103)
T ss_dssp TTCEEEEEEETTEEEEEEEEEE
T ss_pred CCCeeccEEECCEEEEEEEEEE
Confidence 99999 9999999999988653
No 12
>2rqs_A Parvulin-like peptidyl-prolyl isomerase; CIS/trans isomerisation, cenarcheaum symbiosum, low temperat NIMA-kinase, PIN1, cell cycle; NMR {Cenarchaeum symbiosum}
Probab=99.89 E-value=4.1e-23 Score=153.50 Aligned_cols=90 Identities=32% Similarity=0.546 Sum_probs=83.9
Q ss_pred CCCceEEEeeEEeccchHHHHHHHHHHhCCCCcHHHHHHHhCCCC-CccCCCcccceeCCCCcHHHHHHHhcCCCCcee-
Q 022543 85 GGDREILVQHLLVKEDDLNLLSELQRRVSQGKDLSDLAVEHSICP-SKGEGGMLGWVRKGQLVPEFEEVAFTTPLNKVA- 162 (295)
Q Consensus 85 ~~~~~~~~~~Il~~~~~~~~a~~i~~~i~~g~~F~~~a~~~S~d~-~~~~gG~lg~~~~~~~~~~~~~~~~~l~~g~is- 162 (295)
+.+++++++||+++.++ +|++++++|++|++|+++|++||+|. ++.+||+|||+..+.++++|.+++++|++|++|
T Consensus 5 ~~~~~~~~~hIl~~~~~--~A~~i~~~l~~g~~F~~lA~~~S~d~~s~~~GG~lG~~~~~~l~~~f~~a~~~l~~G~is~ 82 (97)
T 2rqs_A 5 SMADKIKCSHILVKKQG--EALAVQERLKAGEKFGKLAKELSIDGGSAKRDGSLGYFGRGKMVKPFEDAAFRLQVGEVSE 82 (97)
T ss_dssp CCCCSEEEEEEEESCHH--HHHHHHHHHTTTCCHHHHHHHTCCCCGGGGGTTEEEEECTTSSCHHHHHHHTTCTTSCBCC
T ss_pred cccceEEEEEEEeCCHH--HHHHHHHHHHCCCCHHHHHHHhCCCCcchhcCceeeeEcCCCCCHHHHHHHHcCCCCCccc
Confidence 66789999999998654 59999999999999999999999664 999999999999999999999999999999999
Q ss_pred eeeecCceeeeehh
Q 022543 163 RCKTKFGWHLLQVL 176 (295)
Q Consensus 163 pv~~~~G~~ii~v~ 176 (295)
||++++||||+++.
T Consensus 83 pv~t~~G~hIi~v~ 96 (97)
T 2rqs_A 83 PVKSEFGYHVIKRL 96 (97)
T ss_dssp CEECSSCEEEEEEC
T ss_pred cEEECCEEEEEEEe
Confidence 99999999999874
No 13
>3ui4_A Peptidyl-prolyl CIS-trans isomerase NIMA-interact; peptidyl-prolyl-isomerase; 0.80A {Homo sapiens} SCOP: d.26.1.1 PDB: 3ui5_A 3ui6_A 1fjd_A 1eq3_A
Probab=99.89 E-value=1.9e-23 Score=156.21 Aligned_cols=90 Identities=30% Similarity=0.610 Sum_probs=83.4
Q ss_pred CCceEEEeeEEeccchHHHHHHHHHHhCCCCcHHHHHHHhCCCCCccCCCcccceeCCCCcHHHHHHHhcCCCCcee---
Q 022543 86 GDREILVQHLLVKEDDLNLLSELQRRVSQGKDLSDLAVEHSICPSKGEGGMLGWVRKGQLVPEFEEVAFTTPLNKVA--- 162 (295)
Q Consensus 86 ~~~~~~~~~Il~~~~~~~~a~~i~~~i~~g~~F~~~a~~~S~d~~~~~gG~lg~~~~~~~~~~~~~~~~~l~~g~is--- 162 (295)
.+++|+++||+++.+++ |++++++|++|++|+++|++||+|+ +.+||+|||+..++++++|.+++|+|++|++|
T Consensus 4 g~~~v~~~~Ilv~~~~~--A~~i~~~l~~G~~F~~lA~~~S~d~-a~~GGdlG~~~~~~l~~~f~~a~~~l~~G~vs~~~ 80 (101)
T 3ui4_A 4 GSNAVKVRHILCEKHGK--IMEAMEKLKSGMRFNEVAAQYSEDK-ARQGGDLGWMTRGSMVGPFQEAAFALPVSGMDKPV 80 (101)
T ss_dssp GGCEEEEEEEEESSHHH--HHHHHHHHHTTCCHHHHHHHHCSSS-GGGTTEEEEEETTSSCHHHHHHHHTSCCCBTTBCC
T ss_pred CCcEEEEEEEEECCHHH--HHHHHHHHHCCCCHHHHHHHhCcCc-hhcCCceeeEcCCCCCHHHHHHHHhCCCCCCccCc
Confidence 35799999999997755 9999999999999999999999995 78999999999999999999999999999998
Q ss_pred ----eeeecCceeeeehhhh
Q 022543 163 ----RCKTKFGWHLLQVLSE 178 (295)
Q Consensus 163 ----pv~~~~G~~ii~v~~~ 178 (295)
||++++||||+++.++
T Consensus 81 ~~~~pv~t~~G~hIikv~~r 100 (101)
T 3ui4_A 81 FTDPPVKTKFGYHIIMVEGR 100 (101)
T ss_dssp BCSSCEEETTEEEEEEEEEE
T ss_pred ccCCcEEECCEEEEEEEEee
Confidence 7999999999998764
No 14
>1zk6_A Foldase protein PRSA; alpha/beta structure, isomerase; NMR {Bacillus subtilis}
Probab=99.89 E-value=1.2e-23 Score=155.29 Aligned_cols=89 Identities=30% Similarity=0.590 Sum_probs=82.9
Q ss_pred CceEEEeeEEeccchHHHHHHHHHHhCCCCcHHHHHHHhCCCCCccCCCccccee-CCCCcHHHHHHHhcCCCCcee-ee
Q 022543 87 DREILVQHLLVKEDDLNLLSELQRRVSQGKDLSDLAVEHSICPSKGEGGMLGWVR-KGQLVPEFEEVAFTTPLNKVA-RC 164 (295)
Q Consensus 87 ~~~~~~~~Il~~~~~~~~a~~i~~~i~~g~~F~~~a~~~S~d~~~~~gG~lg~~~-~~~~~~~~~~~~~~l~~g~is-pv 164 (295)
.++++++||+++.+ ++|++++++|++|++|+++|++||+|+++.+||+|||+. .+.++++|.+++++|++|++| ||
T Consensus 2 ~~~~~~~hIl~~~~--~~A~~i~~~l~~g~~F~~lA~~~S~~~s~~~gG~lg~~~~~~~l~~~f~~a~~~l~~G~is~pv 79 (93)
T 1zk6_A 2 SGKIRASHILVADK--KTAEEVEKKLKKGEKFEDLAKEYSTDSSASKGGDLGWFAKEGQMDETFSKAAFKLKTGEVSDPV 79 (93)
T ss_dssp -CCEEEEEEEESSH--HHHHHHHHHHHHTCCHHHHHHHHCCSGGGGGTTEEEEECTTTSSCTTHHHHHHHSCTTCBCCCE
T ss_pred CCEEEEEEEEeccH--HHHHHHHHHHHCCCCHHHHHHHhCCCchhhhCCeeeeecccccCCHHHHHHHHcCCCCCccceE
Confidence 46899999999865 459999999999999999999999999999999999999 999999999999999999999 99
Q ss_pred eecCceeeeehhh
Q 022543 165 KTKFGWHLLQVLS 177 (295)
Q Consensus 165 ~~~~G~~ii~v~~ 177 (295)
++++||||+++.+
T Consensus 80 ~t~~G~hIi~v~~ 92 (93)
T 1zk6_A 80 KTQYGYHIIKKTE 92 (93)
T ss_dssp ECSSCEEEEEEEE
T ss_pred EECCEEEEEEEec
Confidence 9999999998753
No 15
>1m5y_A SurviVal protein, surviVal protein SURA; surviVal protein A, periplasmic molecular chaperone, membrane protein folding, GRAM negative bacteria; 3.00A {Escherichia coli} SCOP: a.223.1.2 d.26.1.1 d.26.1.1 PDB: 2pv3_A
Probab=99.88 E-value=1.8e-23 Score=194.28 Aligned_cols=167 Identities=18% Similarity=0.228 Sum_probs=142.0
Q ss_pred hhhccccccccccccCcchhhhccCchhh-hhhccccCCCCCCCccceeecccccCchhhhccccCCCCCCC--------
Q 022543 13 LCAITQSLIPTLNLSSSSSLSIFQKPASF-ASFYKSLNPASNSNSFHIHIISRSFTSPKAASFSSGTEGSSP-------- 83 (295)
Q Consensus 13 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~y~~~~~~~~~-------- 83 (295)
|++..+......+.+.+.+..+ .+|+.+ +.||.++ ++.+||++||+..+.+.++|+.+.|.++.+.++.
T Consensus 168 s~~~~~~~~~~a~~~~~~l~~g-~~F~~lA~~~S~~~-~~~~gG~lg~~~~~~l~~~~~~~~~~l~~G~vs~pv~~~~g~ 245 (408)
T 1m5y_A 168 TSDQVNEAESQARAIVDQARNG-ADFGKLAIAHSADQ-QALNGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGF 245 (408)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTT-CCHHHHHHHHCCST-TGGGTTEEEEECGGGSCHHHHTGGGTCCTTCEEEEEEETTEE
T ss_pred CHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHHcCCCc-ccccCCcccccchhhccHHHHHHHHhCCCCCccCeeecCCeE
Confidence 3444444445555666677665 699999 9999998 6889999999999999999999999988776442
Q ss_pred -------------CCCCceEEEeeEEeccc-------hHHHHHHHHHHhCCCC-cHHHHHHHhCCCC-CccCCCccccee
Q 022543 84 -------------GGGDREILVQHLLVKED-------DLNLLSELQRRVSQGK-DLSDLAVEHSICP-SKGEGGMLGWVR 141 (295)
Q Consensus 84 -------------~~~~~~~~~~~Il~~~~-------~~~~a~~i~~~i~~g~-~F~~~a~~~S~d~-~~~~gG~lg~~~ 141 (295)
....++++++|||+++. +++++++++++|++|+ +|+++|++||.|+ ++.+||++||++
T Consensus 246 ~iikv~~~~~~~~~~~~~~~~~~~Il~~~~~~~~~~~a~~~a~~~~~~l~~g~~~f~~~A~~~s~~~~s~~~gg~lg~~~ 325 (408)
T 1m5y_A 246 HILKVNDLRGESKNISVTEVHARHILLKPSPIMTDEQARVKLEQIAADIKSGKTTFAAAAKEFSQDPGSANQGGDLGWAT 325 (408)
T ss_dssp EEEEEEEECCCCCCCCCEEEEEEEEEECCCSSSCHHHHHHHHHHHHHHHHTTSSCHHHHHHHHCCCTTTGGGTTEEEEEC
T ss_pred EEEEEEEecCCCCcccccchhhheeeecCCCCcCHHHHHHHHHHHHHHHHcCcccHHHHHHHhCCCcchhhcCCcCcccC
Confidence 12346899999999853 4677999999999998 9999999999998 999999999999
Q ss_pred CCCCcHHHHHHHhcCCCCcee-eeeecCceeeeehhhhhhh
Q 022543 142 KGQLVPEFEEVAFTTPLNKVA-RCKTKFGWHLLQVLSEREA 181 (295)
Q Consensus 142 ~~~~~~~~~~~~~~l~~g~is-pv~~~~G~~ii~v~~~~~~ 181 (295)
.+.++|+|..++|+|++|++| ||++++||||+++.+.++.
T Consensus 326 ~~~~~~~~~~a~f~l~~G~~s~~v~~~~g~~ii~v~~~~~~ 366 (408)
T 1m5y_A 326 PDIFDPAFRDALTRLNKGQMSAPVHSSFGWHLIELLDTRNV 366 (408)
T ss_dssp GGGSCHHHHHHHHTCCTTCBCCCEECSSCEEEEEEEEEEEC
T ss_pred cccchHHHHHHHHcCCCCCccCcEeeCCeEEEEEEeeecCC
Confidence 999999999999999999999 9999999999999987654
No 16
>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A
Probab=99.88 E-value=1.1e-23 Score=159.76 Aligned_cols=99 Identities=31% Similarity=0.529 Sum_probs=86.7
Q ss_pred ccccchhHHHhhhcCCCccccceEEeccChhhhhccCCCCceecCcccccCCCCCccccCCCCCcEEEEeCCChhHHHHH
Q 022543 184 LQDIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSWGPDITVKFDPQKDTYVMCHHGMRSLQVA 263 (295)
Q Consensus 184 ~~~is~~el~~~l~~~~~~~~~~liDvR~~~e~~~ghIpgAinip~~~l~~~~~~~~~~~~~~~~iv~~C~~g~rs~~a~ 263 (295)
...++++++.+++.+ .+..+||||++.||..||||||+|||+..+..+ +..++++++||+||.+|.||..++
T Consensus 4 ~~~i~~~~l~~~~~~----~~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~~----~~~l~~~~~ivvyc~~g~rs~~a~ 75 (108)
T 1gmx_A 4 FECINVADAHQKLQE----KEAVLVDIRDPQSFAMGHAVQAFHLTNDTLGAF----MRDNDFDTPVMVMCYHGNSSKGAA 75 (108)
T ss_dssp CEEECHHHHHHHHHT----TCCEEEECSCHHHHHHCEETTCEECCHHHHHHH----HHHSCTTSCEEEECSSSSHHHHHH
T ss_pred ccccCHHHHHHHHhC----CCCEEEEcCCHHHHHhCCCccCEeCCHHHHHHH----HHhcCCCCCEEEEcCCCchHHHHH
Confidence 345888899988875 357899999999999999999999999887543 344688999999999999999999
Q ss_pred HHHHHcCCCCeEEecchHHHcccccCCC
Q 022543 264 QWLQTQGFRRVFNVSGGIHAYATKVDPS 291 (295)
Q Consensus 264 ~~L~~~G~~~v~~l~GG~~~W~~~~~p~ 291 (295)
+.|+..||+||++|+||+.+|... .|.
T Consensus 76 ~~L~~~G~~~v~~l~GG~~~W~~~-~p~ 102 (108)
T 1gmx_A 76 QYLLQQGYDVVYSIDGGFEAWQRQ-FPA 102 (108)
T ss_dssp HHHHHHTCSSEEEETTHHHHHHHH-CGG
T ss_pred HHHHHcCCceEEEecCCHHHHHHh-CCc
Confidence 999999999999999999999877 553
No 17
>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A
Probab=99.88 E-value=9.6e-24 Score=159.67 Aligned_cols=98 Identities=18% Similarity=0.332 Sum_probs=78.1
Q ss_pred HHHhhhcCCCccccceEEeccChhhhhccCCCCceecCcccccCCCCCccccCCCCCcEEEEeCCChhHHHHHHHHHHcC
Q 022543 191 ELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSWGPDITVKFDPQKDTYVMCHHGMRSLQVAQWLQTQG 270 (295)
Q Consensus 191 el~~~l~~~~~~~~~~liDvR~~~e~~~ghIpgAinip~~~l~~~~~~~~~~~~~~~~iv~~C~~g~rs~~a~~~L~~~G 270 (295)
++.+++.+.. .+.++||||++.||..||||||+|||+..+... ....++++++|||||.+|.||..+++.|+..|
T Consensus 2 el~~~l~~~~--~~~~liDvR~~~e~~~ghIpgAi~ip~~~l~~~---~~~~l~~~~~ivvyc~~g~rs~~a~~~L~~~G 76 (106)
T 3hix_A 2 VLKSRLEWGE--PAFTILDVRDRSTYNDGHIMGAMAMPIEDLVDR---ASSSLEKSRDIYVYGAGDEQTSQAVNLLRSAG 76 (106)
T ss_dssp -------------CCEEEECSCHHHHHTCEETTCEECCGGGHHHH---HHHHSCTTSCEEEECSSHHHHHHHHHHHHHTT
T ss_pred hHHHHHHcCC--CCeEEEECCCHHHHhcCcCCCCEeCCHHHHHHH---HHhcCCCCCeEEEEECCCChHHHHHHHHHHcC
Confidence 4555565321 468999999999999999999999999887543 22456889999999999999999999999999
Q ss_pred CCCeEEecchHHHcccccCCCCC
Q 022543 271 FRRVFNVSGGIHAYATKVDPSIP 293 (295)
Q Consensus 271 ~~~v~~l~GG~~~W~~~~~p~~p 293 (295)
|+||++|+||+.+|.+++.|+.+
T Consensus 77 ~~~v~~l~GG~~~W~~~g~~~~~ 99 (106)
T 3hix_A 77 FEHVSELKGGLAAWKAIGGPTEL 99 (106)
T ss_dssp CSCEEECTTHHHHHHHTTCCEEE
T ss_pred CcCEEEecCCHHHHHHCCCCCCC
Confidence 99999999999999999887644
No 18
>2kgj_A Peptidyl-prolyl CIS-trans isomerase D; prolyl isomerase, parvulin, cell inner membrane, cell membrane, membrane, rotamase, stress response; NMR {Escherichia coli}
Probab=99.88 E-value=1.5e-23 Score=157.18 Aligned_cols=93 Identities=16% Similarity=0.312 Sum_probs=87.3
Q ss_pred ceEEEeeEEeccchHHHHHHHHHHhCCCCcHHHHHHHhCCCC-CccCCCcccceeCCCCcHHHHHHHhcCCCCcee-eee
Q 022543 88 REILVQHLLVKEDDLNLLSELQRRVSQGKDLSDLAVEHSICP-SKGEGGMLGWVRKGQLVPEFEEVAFTTPLNKVA-RCK 165 (295)
Q Consensus 88 ~~~~~~~Il~~~~~~~~a~~i~~~i~~g~~F~~~a~~~S~d~-~~~~gG~lg~~~~~~~~~~~~~~~~~l~~g~is-pv~ 165 (295)
++++++|||+..+++++|++++++|++|++|+++|++||+|+ ++.+||+|||+..+.++++|.+++++ ++|++| ||+
T Consensus 2 ~~~~~~hIl~~~~~~~~A~~i~~~l~~G~~F~~lA~~~S~d~~sa~~GGdlG~~~~~~l~~~f~~a~~~-~~GeiS~pv~ 80 (102)
T 2kgj_A 2 QPQRTRYSIIQTKTEDEAKAVLDELNKGGDFAALAKEKSADIISARNGGDMGWLEDATIPDELKNAGLK-EKGQLSGVIK 80 (102)
T ss_dssp CCCEEEEEEEEESSHHHHHHHHHHHHHTSCHHHHHHHTCTTHHHHTTTSEEEEEETTCCCHHHHTTCCC-STTCEEEEEE
T ss_pred CEEEEEeeecChhhHHHHHHHHHHHHCCCCHHHHHHHhCCCchhhhcCCccceecccccCHHHHHHHhc-CCCCccccEE
Confidence 578999999976667889999999999999999999999999 99999999999999999999999999 999999 999
Q ss_pred ecCceeeeehhhhhhh
Q 022543 166 TKFGWHLLQVLSEREA 181 (295)
Q Consensus 166 ~~~G~~ii~v~~~~~~ 181 (295)
+++||||+++.++++.
T Consensus 81 t~~G~hIikv~~~~~~ 96 (102)
T 2kgj_A 81 SSVGFLIVRLDDIQAA 96 (102)
T ss_dssp ETTEEEEEEEEEEECS
T ss_pred ECCEEEEEEEeecccc
Confidence 9999999999887654
No 19
>3tc5_A Peptidyl-prolyl CIS-trans isomerase NIMA-interact; PIN1 mutant (R14A), oncogenic transformation, small molecule cycle, rotamase, phosphoprotein; HET: 3T5 P6G; 1.40A {Homo sapiens} PDB: 2itk_A* 2q5a_A* 2xp3_A* 2xp4_A* 2xp5_A* 2xp7_A* 2xp8_A* 2xp9_A* 2xpa_A* 2xpb_A* 3kab_A* 3kag_A* 3kah_A* 3kai_A* 3kce_A* 3ntp_A* 3odk_A* 3oob_A* 2zr6_A* 1f8a_B* ...
Probab=99.88 E-value=6.4e-23 Score=166.59 Aligned_cols=92 Identities=28% Similarity=0.480 Sum_probs=82.4
Q ss_pred CCCceEEEeeEEecc-------------------chHHHHHHHHHHhCCC-CcHHHHHHHhCCCCCccCCCcccceeCCC
Q 022543 85 GGDREILVQHLLVKE-------------------DDLNLLSELQRRVSQG-KDLSDLAVEHSICPSKGEGGMLGWVRKGQ 144 (295)
Q Consensus 85 ~~~~~~~~~~Il~~~-------------------~~~~~a~~i~~~i~~g-~~F~~~a~~~S~d~~~~~gG~lg~~~~~~ 144 (295)
..+++|+++||||+. ++++.+++++++|++| ++|++||++||+|+++.+||+|||+..++
T Consensus 53 ~~~~~v~~~HILi~~~~~~~p~~~~~~~~~~~~~~A~~~~~~i~~~l~~g~~~F~~lA~~~Sd~~sa~~GGdLG~~~~~~ 132 (166)
T 3tc5_A 53 GEPARVRCSHLLVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFSDCSSAKARGDLGAFSRGQ 132 (166)
T ss_dssp -CCSCEEEEEEEECCTTSSSCCBTTBSSCCCCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHCSSGGGGGTTEEEEECTTS
T ss_pred ccccceeEeeeEEecccccCccccchhhhhhHHHHHHHHHHHHHHHHHcCccCHHHHHHHhCcccHHhcCCccceecccc
Confidence 567899999999982 1345566777799999 59999999999988999999999999999
Q ss_pred CcHHHHHHHhcCCCCcee-eeeecCceeeeehh
Q 022543 145 LVPEFEEVAFTTPLNKVA-RCKTKFGWHLLQVL 176 (295)
Q Consensus 145 ~~~~~~~~~~~l~~g~is-pv~~~~G~~ii~v~ 176 (295)
|+++|.+++|+|++|++| ||++++|||||++.
T Consensus 133 l~~~f~~a~f~l~~GeiS~pv~t~~G~hIi~v~ 165 (166)
T 3tc5_A 133 MQKPFEDASFALRTGEMSGPVFTDSGIHIILRT 165 (166)
T ss_dssp SCHHHHHHHHHSCTTCBCCCEEETTEEEEEEEC
T ss_pred cCHHHHHHHHhCCCCCCcccEEECCEEEEEEEe
Confidence 999999999999999999 99999999999875
No 20
>1wv9_A Rhodanese homolog TT1651; CDC25, phosphatase, sulfurtransferase, structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=99.87 E-value=8.3e-23 Score=151.06 Aligned_cols=91 Identities=19% Similarity=0.413 Sum_probs=76.7
Q ss_pred ccchhHHHhhhcCCCccccceEEeccChhhhhccCCCCceecCcccccCCCCCccccCCCCCcEEEEeCCChhHHHHHHH
Q 022543 186 DIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSWGPDITVKFDPQKDTYVMCHHGMRSLQVAQW 265 (295)
Q Consensus 186 ~is~~el~~~l~~~~~~~~~~liDvR~~~e~~~ghIpgAinip~~~l~~~~~~~~~~~~~~~~iv~~C~~g~rs~~a~~~ 265 (295)
.++++++.+++.+ +.++||||++.||..||||||+|+|+..+... +..+++ ++||+||.+|.||..++..
T Consensus 3 ~is~~~l~~~~~~-----~~~liDvR~~~e~~~ghi~gAi~ip~~~l~~~----~~~l~~-~~ivvyC~~g~rs~~a~~~ 72 (94)
T 1wv9_A 3 KVRPEELPALLEE-----GVLVVDVRPADRRSTPLPFAAEWVPLEKIQKG----EHGLPR-RPLLLVCEKGLLSQVAALY 72 (94)
T ss_dssp EECGGGHHHHHHT-----TCEEEECCCC--CCSCCSSCCEECCHHHHTTT----CCCCCS-SCEEEECSSSHHHHHHHHH
T ss_pred cCCHHHHHHHHHC-----CCEEEECCCHHHHhcccCCCCEECCHHHHHHH----HHhCCC-CCEEEEcCCCChHHHHHHH
Confidence 4778888888763 46899999999999999999999999988654 344678 9999999999999999999
Q ss_pred HHHcCCCCeEEecchHHHcccc
Q 022543 266 LQTQGFRRVFNVSGGIHAYATK 287 (295)
Q Consensus 266 L~~~G~~~v~~l~GG~~~W~~~ 287 (295)
|+..||+ |++|+||+.+|..+
T Consensus 73 L~~~G~~-v~~l~GG~~~W~~~ 93 (94)
T 1wv9_A 73 LEAEGYE-AMSLEGGLQALTQG 93 (94)
T ss_dssp HHHHTCC-EEEETTGGGCC---
T ss_pred HHHcCCc-EEEEcccHHHHHhC
Confidence 9999998 99999999999765
No 21
>2jzv_A Foldase protein PRSA; ppiase, parvulin, proline isomerase, lipoprotein, membrane, palmitate, rotamase; NMR {Staphylococcus aureus}
Probab=99.87 E-value=1.9e-22 Score=153.73 Aligned_cols=92 Identities=28% Similarity=0.458 Sum_probs=85.3
Q ss_pred CCCceEEEeeEEecc-------------chHHHHHHHHHHhCCC-CcHHHHHHHhCCCC-CccCCCcccceeCCCCcHHH
Q 022543 85 GGDREILVQHLLVKE-------------DDLNLLSELQRRVSQG-KDLSDLAVEHSICP-SKGEGGMLGWVRKGQLVPEF 149 (295)
Q Consensus 85 ~~~~~~~~~~Il~~~-------------~~~~~a~~i~~~i~~g-~~F~~~a~~~S~d~-~~~~gG~lg~~~~~~~~~~~ 149 (295)
..+++|+++||||+. +++++|++++++|++| ++|+++|++||+|+ ++.+||+|||+..+.++++|
T Consensus 3 ~~~~~~~~~hIli~~~~~~~~~~~~~~~~~~~~a~~i~~~l~~g~~~F~~lA~~~S~d~~s~~~gG~lG~~~~~~l~~~f 82 (111)
T 2jzv_A 3 LGSDSKKASHILIKVKSKKSDKEGLDDKEAKQKAEEIQKEVSKDPSKFGEIAKKESMDTGSAKKDGELGYVLKGQTDKDF 82 (111)
T ss_dssp CCCSEEEEEEEEEEBCSCSSCSSSBCHHHHHHHHHHHHHHHHSCTTSHHHHHHHHCSCHHHHTTTTEEEEEETTSSCHHH
T ss_pred CCCcEEEEEEEEEECCCCCChhhhhhHHHHHHHHHHHHHHHHcCcccHHHHHHHHCCCcchhhhCCccceecCCcccHHH
Confidence 467899999999982 1567899999999999 89999999999999 99999999999999999999
Q ss_pred HHHHhcCCCCcee-eeeecCceeeeehh
Q 022543 150 EEVAFTTPLNKVA-RCKTKFGWHLLQVL 176 (295)
Q Consensus 150 ~~~~~~l~~g~is-pv~~~~G~~ii~v~ 176 (295)
.+++|+|++|++| ||++++||||+++.
T Consensus 83 ~~a~~~l~~G~is~pv~t~~G~hIi~v~ 110 (111)
T 2jzv_A 83 EKALFKLKDGEVSEVVKSSFGYHIIKAD 110 (111)
T ss_dssp HHHHHTCCTTCBCCCEEETTEEEEEEEC
T ss_pred HHHHHhCCCCCcCccEEECCEEEEEEEe
Confidence 9999999999999 99999999999874
No 22
>1tq1_A AT5G66040, senescence-associated family protein; CESG, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: c.46.1.3
Probab=99.87 E-value=7.1e-23 Score=160.37 Aligned_cols=105 Identities=24% Similarity=0.381 Sum_probs=86.7
Q ss_pred hhccccchhHHHhhhcCCCccccceEEeccChhhhhccCCCCceecCcccccC--------CCCCccccCCCCCcEEEEe
Q 022543 182 SLLQDIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGS--------WGPDITVKFDPQKDTYVMC 253 (295)
Q Consensus 182 ~~~~~is~~el~~~l~~~~~~~~~~liDvR~~~e~~~ghIpgAinip~~~l~~--------~~~~~~~~~~~~~~iv~~C 253 (295)
.....++++++.+++. .+.++||||++.||..||||||+|||+..+.. ........++++++|||||
T Consensus 15 ~~~~~is~~e~~~~l~-----~~~~lIDvR~~~e~~~ghIpgAinip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivvyC 89 (129)
T 1tq1_A 15 RVPSSVSVTVAHDLLL-----AGHRYLDVRTPEEFSQGHACGAINVPYMNRGASGMSKNTDFLEQVSSHFGQSDNIIVGC 89 (129)
T ss_dssp CCCEEEEHHHHHHHHH-----HTCCEEEESCHHHHHHCCBTTBEECCSCCCSTTTCCCTTTHHHHHTTTCCTTSSEEEEE
T ss_pred CCCcccCHHHHHHHhc-----CCCEEEECCCHHHHhcCCCCCcEECcHhhcccccccCCHHHHHHHHhhCCCCCeEEEEC
Confidence 4456688899988876 24689999999999999999999999843311 0011233468899999999
Q ss_pred CCChhHHHHHHHHHHcCCCCeEEecchHHHcccccCCC
Q 022543 254 HHGMRSLQVAQWLQTQGFRRVFNVSGGIHAYATKVDPS 291 (295)
Q Consensus 254 ~~g~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~~~p~ 291 (295)
.+|.||..++..|+..||+||++|+||+.+|...+.|.
T Consensus 90 ~~G~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~ 127 (129)
T 1tq1_A 90 QSGGRSIKATTDLLHAGFTGVKDIVGGYSAWAKNGLPT 127 (129)
T ss_dssp SSCSHHHHHHHHHHHHHCCSEEEEECCHHHHHHHTCCC
T ss_pred CCCcHHHHHHHHHHHcCCCCeEEeCCcHHHHHhCCCCC
Confidence 99999999999999999999999999999999888775
No 23
>3d1p_A Putative thiosulfate sulfurtransferase YOR285W; atomic structure, atomic resolution structure, PSI, MCSG; HET: MSE; 0.98A {Saccharomyces cerevisiae}
Probab=99.87 E-value=2.8e-22 Score=158.88 Aligned_cols=109 Identities=17% Similarity=0.315 Sum_probs=90.7
Q ss_pred hccccchhHHHhhhcCCCccccceEEeccChhhhhccCCCCceecCcccccCCCC----Cc-----cccCCCCCcEEEEe
Q 022543 183 LLQDIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSWGP----DI-----TVKFDPQKDTYVMC 253 (295)
Q Consensus 183 ~~~~is~~el~~~l~~~~~~~~~~liDvR~~~e~~~ghIpgAinip~~~l~~~~~----~~-----~~~~~~~~~iv~~C 253 (295)
....++++++.+++.+.. .+.++||||++.||..||||||+|+|+..+..... .+ ...++++++||+||
T Consensus 21 ~~~~is~~el~~~l~~~~--~~~~liDvR~~~e~~~ghIpgAinip~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ivvyC 98 (139)
T 3d1p_A 21 NIQSYSFEDMKRIVGKHD--PNVVLVDVREPSEYSIVHIPASINVPYRSHPDAFALDPLEFEKQIGIPKPDSAKELIFYC 98 (139)
T ss_dssp CCEECCHHHHHHHHHHTC--TTEEEEECSCHHHHHHCCCTTCEECCTTTCTTGGGSCHHHHHHHHSSCCCCTTSEEEEEC
T ss_pred CcceecHHHHHHHHhCCC--CCeEEEECcCHHHHhCCCCCCcEEcCHHHhhhhccCCHHHHHHHHhccCCCCCCeEEEEC
Confidence 455688899998886321 46789999999999999999999999988754211 00 02357899999999
Q ss_pred CCChhHHHHHHHHHHcCCCCeEEecchHHHcccccCCCCC
Q 022543 254 HHGMRSLQVAQWLQTQGFRRVFNVSGGIHAYATKVDPSIP 293 (295)
Q Consensus 254 ~~g~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~~~p~~p 293 (295)
.+|.||..++..|+..||+||++|+||+.+|...+.|.+.
T Consensus 99 ~~G~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 138 (139)
T 3d1p_A 99 ASGKRGGEAQKVASSHGYSNTSLYPGSMNDWVSHGGDKLD 138 (139)
T ss_dssp SSSHHHHHHHHHHHTTTCCSEEECTTHHHHHHHTTGGGCC
T ss_pred CCCchHHHHHHHHHHcCCCCeEEeCCcHHHHHHcCCCCCC
Confidence 9999999999999999999999999999999999888654
No 24
>1qxn_A SUD, sulfide dehydrogenase; polysulfide-sulfur transferase, homodimer; NMR {Wolinella succinogenes} SCOP: c.46.1.3
Probab=99.87 E-value=1.2e-22 Score=160.72 Aligned_cols=104 Identities=23% Similarity=0.460 Sum_probs=89.6
Q ss_pred hccccchhHHHhhhcCCCccccceEEeccChhhhhc-cC--CCCceecCcccccCCCCCccccCCCCCcEEEEeCCChhH
Q 022543 183 LLQDIQPDELHKKMQDPNFHKEAQLIDVREPEEVAL-SS--LPGFQVLPLRQFGSWGPDITVKFDPQKDTYVMCHHGMRS 259 (295)
Q Consensus 183 ~~~~is~~el~~~l~~~~~~~~~~liDvR~~~e~~~-gh--IpgAinip~~~l~~~~~~~~~~~~~~~~iv~~C~~g~rs 259 (295)
....++++++.+++.+. .+.++||||++.||.. || ||||+|||+..+... ..+..++++++|||||.+|.||
T Consensus 21 ~~~~is~~el~~~l~~~---~~~~liDVR~~~E~~~~gh~~IpgAinip~~~l~~~--~~~~~l~~~~~ivvyC~~G~rS 95 (137)
T 1qxn_A 21 DMVMLSPKDAYKLLQEN---PDITLIDVRDPDELKAMGKPDVKNYKHMSRGKLEPL--LAKSGLDPEKPVVVFCKTAARA 95 (137)
T ss_dssp SSEEECHHHHHHHHHHC---TTSEEEECCCHHHHHHTCEECCSSEEECCTTTSHHH--HHHHCCCTTSCEEEECCSSSCH
T ss_pred cCcccCHHHHHHHHhcC---CCeEEEECCCHHHHHhcCCcCCCCCEEcchHHhhhH--HhhccCCCCCeEEEEcCCCcHH
Confidence 34568889999988721 4679999999999999 99 999999999887531 1234578999999999999999
Q ss_pred HHHHHHHHHcCCCCeEEecchHHHcccccCCC
Q 022543 260 LQVAQWLQTQGFRRVFNVSGGIHAYATKVDPS 291 (295)
Q Consensus 260 ~~a~~~L~~~G~~~v~~l~GG~~~W~~~~~p~ 291 (295)
..++..|+..||+||++|+||+.+|...+.|.
T Consensus 96 ~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~ 127 (137)
T 1qxn_A 96 ALAGKTLREYGFKTIYNSEGGMDKWLEEGLPS 127 (137)
T ss_dssp HHHHHHHHHHTCSCEEEESSCHHHHHHTTCCE
T ss_pred HHHHHHHHHcCCcceEEEcCcHHHHHHCCCCc
Confidence 99999999999999999999999999988774
No 25
>2hhg_A Hypothetical protein RPA3614; MCSG, structural genomics, rohopseudom palustris, PSI-2, protein structure initiative; 1.20A {Rhodopseudomonas palustris}
Probab=99.87 E-value=4.5e-22 Score=157.67 Aligned_cols=108 Identities=20% Similarity=0.359 Sum_probs=89.4
Q ss_pred hccccchhHHHhhhcCCCccccceEEeccChhhhhc-cCCCCceecCcccccCCC----CCccccCCCCCcEEEEeCCCh
Q 022543 183 LLQDIQPDELHKKMQDPNFHKEAQLIDVREPEEVAL-SSLPGFQVLPLRQFGSWG----PDITVKFDPQKDTYVMCHHGM 257 (295)
Q Consensus 183 ~~~~is~~el~~~l~~~~~~~~~~liDvR~~~e~~~-ghIpgAinip~~~l~~~~----~~~~~~~~~~~~iv~~C~~g~ 257 (295)
....++++++.+++.+.. .+.++||||++.||.. ||||||+|||+..+.... ......++++++|||||.+|.
T Consensus 20 ~~~~is~~~l~~~l~~~~--~~~~liDvR~~~e~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~~~~~~~~~ivvyC~~G~ 97 (139)
T 2hhg_A 20 SIETLTTADAIALHKSGA--SDVVIVDIRDPREIERDGKIPGSFSCTRGMLEFWIDPQSPYAKPIFQEDKKFVFYCAGGL 97 (139)
T ss_dssp TSEEECHHHHHHHHHTTC--TTEEEEECSCHHHHHHHCCCTTCEECCGGGHHHHHCTTSTTCCGGGGSSSEEEEECSSSH
T ss_pred hcCccCHHHHHHHHhccC--CCeEEEECCCHHHHHhCCCCCCeEECChHHHHHhcCccchhhhccCCCCCeEEEECCCCh
Confidence 345688999999887310 4678999999999998 999999999998764211 111234578999999999999
Q ss_pred hHHHHHHHHHHcCCCCeEEecchHHHcccccCCCC
Q 022543 258 RSLQVAQWLQTQGFRRVFNVSGGIHAYATKVDPSI 292 (295)
Q Consensus 258 rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~~~p~~ 292 (295)
||..+++.|+..||+||++|+||+.+|...+.|..
T Consensus 98 rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~ 132 (139)
T 2hhg_A 98 RSALAAKTAQDMGLKPVAHIEGGFGAWRDAGGPIE 132 (139)
T ss_dssp HHHHHHHHHHHHTCCSEEEETTHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHHcCCCCeEEecCCHHHHHHCCCCee
Confidence 99999999999999999999999999998887753
No 26
>3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A
Probab=99.86 E-value=6.1e-23 Score=159.62 Aligned_cols=103 Identities=17% Similarity=0.261 Sum_probs=89.6
Q ss_pred ccccchhHHHhhhcCCCccccceEEeccChhhh-hccCCCCceecCcccccCCCCCccccCCCCCcEEEEeCCChh--HH
Q 022543 184 LQDIQPDELHKKMQDPNFHKEAQLIDVREPEEV-ALSSLPGFQVLPLRQFGSWGPDITVKFDPQKDTYVMCHHGMR--SL 260 (295)
Q Consensus 184 ~~~is~~el~~~l~~~~~~~~~~liDvR~~~e~-~~ghIpgAinip~~~l~~~~~~~~~~~~~~~~iv~~C~~g~r--s~ 260 (295)
...++++++.+++.+.. .+.++||||++.|| ..||||||+|||+..+... +..++++++|||||.+|.| |.
T Consensus 14 ~~~is~~el~~~l~~~~--~~~~liDvR~~~e~~~~ghIpgA~nip~~~l~~~----~~~l~~~~~ivvyC~~g~r~~s~ 87 (124)
T 3flh_A 14 SLYIDHHTVLADMQNAT--GKYVVLDVRNAPAQVKKDQIKGAIAMPAKDLATR----IGELDPAKTYVVYDWTGGTTLGK 87 (124)
T ss_dssp TTEECHHHHHHHHHHTC--CCEEEEECCCSCHHHHCCEETTCEECCHHHHHHH----GGGSCTTSEEEEECSSSSCSHHH
T ss_pred cceecHHHHHHHHHcCC--CCEEEEECCCHHHHHhcCcCCCCEECCHHHHHHH----HhcCCCCCeEEEEeCCCCchHHH
Confidence 34588899999887631 24799999999998 9999999999999888643 3457889999999999999 89
Q ss_pred HHHHHHHHcCCCCeEEecchHHHcccccCCCCC
Q 022543 261 QVAQWLQTQGFRRVFNVSGGIHAYATKVDPSIP 293 (295)
Q Consensus 261 ~a~~~L~~~G~~~v~~l~GG~~~W~~~~~p~~p 293 (295)
.++..|+..||+ |++|+||+.+|...+.|..|
T Consensus 88 ~a~~~L~~~G~~-v~~l~GG~~~W~~~~~p~~~ 119 (124)
T 3flh_A 88 TALLVLLSAGFE-AYELAGALEGWKGMQLPLEH 119 (124)
T ss_dssp HHHHHHHHHTCE-EEEETTHHHHHHHTTCCEEC
T ss_pred HHHHHHHHcCCe-EEEeCCcHHHHHHcCCCCCc
Confidence 999999999996 99999999999999998765
No 27
>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A
Probab=99.86 E-value=1.2e-22 Score=161.45 Aligned_cols=99 Identities=18% Similarity=0.345 Sum_probs=86.2
Q ss_pred cchhHHHhhhcCCCccccceEEeccChhhhhccCCCCceecCcccccCCCCCccccCCCCCcEEEEeCCChhHHHHHHHH
Q 022543 187 IQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSWGPDITVKFDPQKDTYVMCHHGMRSLQVAQWL 266 (295)
Q Consensus 187 is~~el~~~l~~~~~~~~~~liDvR~~~e~~~ghIpgAinip~~~l~~~~~~~~~~~~~~~~iv~~C~~g~rs~~a~~~L 266 (295)
|+++++.+++.+.. .+.++||||++.||..||||||+|||+..+..+. ...++++++|||||.+|.||..+++.|
T Consensus 2 Is~~el~~~l~~~~--~~~~liDvR~~~e~~~ghIpgAi~ip~~~l~~~~---~~~l~~~~~ivvyC~~g~rs~~aa~~L 76 (141)
T 3ilm_A 2 SDAHVLKSRLEWGE--PAFTILDVRDRSTYNDGHIMGAMAMPIEDLVDRA---SSSLEKSRDIYVYGAGDEQTSQAVNLL 76 (141)
T ss_dssp CCHHHHHHHHHHSC--SCEEEEECSCHHHHHHCEETTCEECCGGGHHHHH---HTTSCTTSEEEEECSSHHHHHHHHHHH
T ss_pred CCHHHHHHHHhcCC--CCEEEEECCCHHHHhCCCCCCCEEcCHHHHHHHH---HhcCCCCCeEEEEECCChHHHHHHHHH
Confidence 67788888887531 3579999999999999999999999998875431 234688999999999999999999999
Q ss_pred HHcCCCCeEEecchHHHcccccCC
Q 022543 267 QTQGFRRVFNVSGGIHAYATKVDP 290 (295)
Q Consensus 267 ~~~G~~~v~~l~GG~~~W~~~~~p 290 (295)
+..||+||++|+||+.+|...+.|
T Consensus 77 ~~~G~~~v~~l~GG~~~W~~~g~p 100 (141)
T 3ilm_A 77 RSAGFEHVSELKGGLAAWKAIGGP 100 (141)
T ss_dssp HHTTCCSEEECTTHHHHHHHTTCC
T ss_pred HHcCCCCEEEecCHHHHHHHCCCC
Confidence 999999999999999999988765
No 28
>1j6y_A Peptidyl-prolyl CIS-trans isomerase; parvulin, PIN1, phosphorylation; NMR {Arabidopsis thaliana} SCOP: d.26.1.1
Probab=99.86 E-value=8e-23 Score=161.52 Aligned_cols=93 Identities=24% Similarity=0.465 Sum_probs=84.7
Q ss_pred CCCCceEEEeeEEeccc-----------------------hHHHHHHHHHHhCCCC-cHHHHHHHhCCCCCccCCCcccc
Q 022543 84 GGGDREILVQHLLVKED-----------------------DLNLLSELQRRVSQGK-DLSDLAVEHSICPSKGEGGMLGW 139 (295)
Q Consensus 84 ~~~~~~~~~~~Il~~~~-----------------------~~~~a~~i~~~i~~g~-~F~~~a~~~S~d~~~~~gG~lg~ 139 (295)
...+++|+++||||+.+ ++++|++|+++|++|+ +|+++|++||+|+++.+||+|||
T Consensus 21 f~~~~~v~~~HILi~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~a~~i~~~l~~G~~~F~~lA~~~S~~~sa~~GGdLG~ 100 (139)
T 1j6y_A 21 MASRDQVKASHILIKHQGSRRKASWKDPEGKIILTTTREAAVEQLKSIREDIVSGKANFEEVATRVSDCSSAKRGGDLGS 100 (139)
T ss_dssp CSSCCSCEEECCEECSCTTSSSSSCSCCCSCCCSCCCHHHHHHHHHHHHHHHHSSCCCCHHHHHHSSCHHHHHTCSEEEE
T ss_pred cCCCCeEEEEEEEEecCccccccccccccccccchHHHHHHHHHHHHHHHHHHcCcccHHHHHHHhccCchhhcCCeeee
Confidence 36788999999999842 3456789999999998 79999999999888899999999
Q ss_pred eeCCCCcHHHHHHHhcCCCCcee-eeeecCceeeeehh
Q 022543 140 VRKGQLVPEFEEVAFTTPLNKVA-RCKTKFGWHLLQVL 176 (295)
Q Consensus 140 ~~~~~~~~~~~~~~~~l~~g~is-pv~~~~G~~ii~v~ 176 (295)
+..++|+++|.+++|+|++|++| ||++++||||+++.
T Consensus 101 ~~~~~l~~~f~~a~~~l~~GeiS~pv~t~~G~hIikv~ 138 (139)
T 1j6y_A 101 FGRGQMQKPFEEATYALKVGDISDIVDTDSGVHIIKRT 138 (139)
T ss_dssp CSSSSSCTHHHHHHHHCCSSSCCSCEEETTEEECCCSC
T ss_pred ecccccCHHHHHHHHcCCCCCccccEEECCEEEEEEEe
Confidence 99999999999999999999999 99999999999864
No 29
>3nhv_A BH2092 protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.50A {Bacillus halodurans} PDB: 3o3w_A
Probab=99.86 E-value=1.3e-21 Score=155.95 Aligned_cols=101 Identities=19% Similarity=0.287 Sum_probs=87.7
Q ss_pred cccchhHHHhhhcCCCccccceEEeccChhhhhccCCCCceecCcccccCCCCCccccCCCCCcEEEEeCCC--hhHHHH
Q 022543 185 QDIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSWGPDITVKFDPQKDTYVMCHHG--MRSLQV 262 (295)
Q Consensus 185 ~~is~~el~~~l~~~~~~~~~~liDvR~~~e~~~ghIpgAinip~~~l~~~~~~~~~~~~~~~~iv~~C~~g--~rs~~a 262 (295)
..++++++.+.+.+.. .+.++||||++.||..||||||+|||+..+.. ..+..++++++|||||.+| .||..+
T Consensus 16 ~~is~~el~~~l~~~~--~~~~liDvR~~~ey~~ghIpgAinip~~~l~~---~~~~~l~~~~~ivvyC~~g~~~rs~~a 90 (144)
T 3nhv_A 16 YETDIADLSIDIKKGY--EGIIVVDVRDAEAYKECHIPTAISIPGNKINE---DTTKRLSKEKVIITYCWGPACNGATKA 90 (144)
T ss_dssp TEEEHHHHHHHHHTTC--CSEEEEECSCHHHHHHCBCTTCEECCGGGCST---TTTTTCCTTSEEEEECSCTTCCHHHHH
T ss_pred cccCHHHHHHHHHcCC--CCEEEEECcCHHHHhcCCCCCCEECCHHHHhH---HHHhhCCCCCeEEEEECCCCccHHHHH
Confidence 4578899999887631 36899999999999999999999999998863 1245578999999999998 699999
Q ss_pred HHHHHHcCCCCeEEecchHHHcccccCCC
Q 022543 263 AQWLQTQGFRRVFNVSGGIHAYATKVDPS 291 (295)
Q Consensus 263 ~~~L~~~G~~~v~~l~GG~~~W~~~~~p~ 291 (295)
++.|+..|| +|++|+||+.+|...+.|.
T Consensus 91 a~~L~~~G~-~v~~l~GG~~~W~~~g~pv 118 (144)
T 3nhv_A 91 AAKFAQLGF-RVKELIGGIEYWRKENGEV 118 (144)
T ss_dssp HHHHHHTTC-EEEEEESHHHHHHHTTCCC
T ss_pred HHHHHHCCC-eEEEeCCcHHHHHHCCCCc
Confidence 999999999 6999999999999888764
No 30
>1yw5_A Peptidyl prolyl CIS/trans isomerase; WW-domain, ppiase domain, ordered linker; 1.60A {Candida albicans}
Probab=99.83 E-value=4.8e-21 Score=157.71 Aligned_cols=92 Identities=38% Similarity=0.625 Sum_probs=83.1
Q ss_pred CCCceEEEeeEEeccc--------------------hHHHHHHHHHHhCCCC-cHHHHHHHhCCCCCccCCCcccceeCC
Q 022543 85 GGDREILVQHLLVKED--------------------DLNLLSELQRRVSQGK-DLSDLAVEHSICPSKGEGGMLGWVRKG 143 (295)
Q Consensus 85 ~~~~~~~~~~Il~~~~--------------------~~~~a~~i~~~i~~g~-~F~~~a~~~S~d~~~~~gG~lg~~~~~ 143 (295)
..+++++++||||+.. ++++|++++++|++|+ +|++||++||+|+++.+||+|||+..+
T Consensus 63 ~~~~~~~~~hIlv~~~~~~~p~~~~~~~~~~~~~~~A~~~~~~i~~~l~~G~~~F~~lA~~~S~~~sa~~GGdLG~~~~~ 142 (177)
T 1yw5_A 63 NEDGQVRVSHLLIKNNQSRKPKSWKSPDGISRTRDESIQILKKHLERILSGEVKLSELANTESDCSSHDRGGDLGFFSKG 142 (177)
T ss_dssp CTTSCEEEEEEEECCTTSSSCCBTTBTTCCCCCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHCCSGGGGGTTEEEEECTT
T ss_pred CCcceEEEEEEEEecCCccCcccccccccchhHHHHHHHHHHHHHHHHHcCchhHHHHHHHhCCCcchhcCCccceeccc
Confidence 4678999999999841 2345677889999998 899999999999999999999999999
Q ss_pred CCcHHHHHHHhcCCCCcee-eeeecCceeeeehh
Q 022543 144 QLVPEFEEVAFTTPLNKVA-RCKTKFGWHLLQVL 176 (295)
Q Consensus 144 ~~~~~~~~~~~~l~~g~is-pv~~~~G~~ii~v~ 176 (295)
+|+++|.+++|+|++|++| ||++++||||+++.
T Consensus 143 ~l~~~f~~a~f~L~~GeiS~pv~t~~G~hIikv~ 176 (177)
T 1yw5_A 143 QMQPPFEEAAFNLHVGEVSNIIETNSGVHILQRT 176 (177)
T ss_dssp SSCHHHHHHHHTSCTTCBCCCEEETTEEEEEEEC
T ss_pred ccCHHHHHHHHcCCCCCcCCeEEECCEEEEEEEe
Confidence 9999999999999999999 99999999999864
No 31
>2k0z_A Uncharacterized protein HP1203; A/B domain, structural genomics, unknown function, PSI-2, PR structure initiative; NMR {Helicobacter pylori}
Probab=99.83 E-value=1.9e-21 Score=148.00 Aligned_cols=86 Identities=17% Similarity=0.305 Sum_probs=75.6
Q ss_pred ccceEEeccChhhhhccCCCCceecCcccccCCCCCccccCCCCCcEEEEeCCChhHHHHHHHHHHcCCCCeEEecchHH
Q 022543 203 KEAQLIDVREPEEVALSSLPGFQVLPLRQFGSWGPDITVKFDPQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIH 282 (295)
Q Consensus 203 ~~~~liDvR~~~e~~~ghIpgAinip~~~l~~~~~~~~~~~~~~~~iv~~C~~g~rs~~a~~~L~~~G~~~v~~l~GG~~ 282 (295)
.+.++||||++.||..||||||+|+|+..+...... ..++++++||+||.+|.||..+++.|+..||++ ++|+||+.
T Consensus 15 ~~~~liDvR~~~e~~~ghIpgAi~ip~~~l~~~~~~--~~~~~~~~ivvyC~~G~rs~~aa~~L~~~G~~~-~~l~GG~~ 91 (110)
T 2k0z_A 15 NDFIVVDVRELDEYEELHLPNATLISVNDQEKLADF--LSQHKDKKVLLHCRAGRRALDAAKSMHELGYTP-YYLEGNVY 91 (110)
T ss_dssp GGSEEEEEECHHHHHHSBCTTEEEEETTCHHHHHHH--HHSCSSSCEEEECSSSHHHHHHHHHHHHTTCCC-EEEESCGG
T ss_pred CCeEEEECCCHHHHhcCcCCCCEEcCHHHHHHHHHh--cccCCCCEEEEEeCCCchHHHHHHHHHHCCCCE-EEecCCHH
Confidence 567899999999999999999999999887543111 136889999999999999999999999999999 99999999
Q ss_pred HcccccCCC
Q 022543 283 AYATKVDPS 291 (295)
Q Consensus 283 ~W~~~~~p~ 291 (295)
+|...+.|.
T Consensus 92 ~W~~~g~p~ 100 (110)
T 2k0z_A 92 DFEKYGFRM 100 (110)
T ss_dssp GTTTTTCCC
T ss_pred HHHHCCCcE
Confidence 999988774
No 32
>1t3k_A Arath CDC25, dual-specificity tyrosine phosphatase; cell cycle, phosphorylation, plant, hydrolase; NMR {Arabidopsis thaliana} SCOP: c.46.1.1
Probab=99.83 E-value=1.5e-21 Score=157.03 Aligned_cols=104 Identities=14% Similarity=0.204 Sum_probs=86.8
Q ss_pred ccccchhHHHhhhcCCCccccceEEeccChhhhhccCCCCceecCcccccCCCCCccccCCCCCcEEEEeC-CChhHHHH
Q 022543 184 LQDIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSWGPDITVKFDPQKDTYVMCH-HGMRSLQV 262 (295)
Q Consensus 184 ~~~is~~el~~~l~~~~~~~~~~liDvR~~~e~~~ghIpgAinip~~~l~~~~~~~~~~~~~~~~iv~~C~-~g~rs~~a 262 (295)
...++++++.+++.+ .+.++||||++.||..||||||+|||+..+......+...++++++|||||. +|.||..+
T Consensus 27 ~~~Is~~el~~~l~~----~~~~lIDvR~~~ey~~ghIpgAinip~~~l~~~~~~l~~~~~~~~~iVvyC~~~G~rs~~a 102 (152)
T 1t3k_A 27 ISYITSTQLLPLHRR----PNIAIIDVRDEERNYDGHIAGSLHYASGSFDDKISHLVQNVKDKDTLVFHSALSQVRGPTC 102 (152)
T ss_dssp SEEECTTTTTTCCCC----TTEEEEEESCSHHHHSSCCCSSEEECCSSSSTTHHHHHHTCCSCCEEEESSSCCSSSHHHH
T ss_pred CceECHHHHHHHhcC----CCEEEEECCChhhccCccCCCCEECCHHHHHHHHHHHHHhcCCCCEEEEEcCCCCcchHHH
Confidence 445788888877754 4678999999999999999999999999886654444444578999999999 99999988
Q ss_pred HHHHHH--------cCCCCeEEecchHHHcccccCCC
Q 022543 263 AQWLQT--------QGFRRVFNVSGGIHAYATKVDPS 291 (295)
Q Consensus 263 ~~~L~~--------~G~~~v~~l~GG~~~W~~~~~p~ 291 (295)
+..|.. .||+||++|+||+.+|...+.|.
T Consensus 103 a~~L~~~l~~~L~~~G~~~V~~L~GG~~~W~~~g~p~ 139 (152)
T 1t3k_A 103 ARRLVNYLDEKKEDTGIKNIMILERGFNGWEASGKPV 139 (152)
T ss_dssp HHHHHHHHHHSSSCCCSSEEEEESSTTHHHHHHSCSS
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEcCCHHHHHHcCCcc
Confidence 887743 89999999999999999887664
No 33
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=99.83 E-value=1.4e-21 Score=141.63 Aligned_cols=80 Identities=28% Similarity=0.390 Sum_probs=69.6
Q ss_pred ceEEeccChhhhhccCCCCceecCcccccCCCCCccccCCCCCcEEEEeCCChhHHHHHHHHHHcCCCCeEEecchHHHc
Q 022543 205 AQLIDVREPEEVALSSLPGFQVLPLRQFGSWGPDITVKFDPQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIHAY 284 (295)
Q Consensus 205 ~~liDvR~~~e~~~ghIpgAinip~~~l~~~~~~~~~~~~~~~~iv~~C~~g~rs~~a~~~L~~~G~~~v~~l~GG~~~W 284 (295)
..+||+|++.||..||||||+|+|+..+......+ ..+++++||+||.+|.||..++..|+..||++|+++ |||.+|
T Consensus 2 ~~liDvR~~~e~~~ghIpgA~~ip~~~l~~~~~~l--~~~~~~~ivv~C~~g~rs~~aa~~L~~~G~~~v~~l-GG~~~w 78 (85)
T 2jtq_A 2 EHWIDVRVPEQYQQEHVQGAINIPLKEVKERIATA--VPDKNDTVKVYCNAGRQSGQAKEILSEMGYTHVENA-GGLKDI 78 (85)
T ss_dssp EEEEECSCHHHHTTEEETTCEECCHHHHHHHHHHH--CCCTTSEEEEEESSSHHHHHHHHHHHHTTCSSEEEE-EETTTC
T ss_pred CEEEECCCHHHHHhCCCCCCEEcCHHHHHHHHHHh--CCCCCCcEEEEcCCCchHHHHHHHHHHcCCCCEEec-cCHHHH
Confidence 47999999999999999999999998875432211 137889999999999999999999999999999999 999999
Q ss_pred ccc
Q 022543 285 ATK 287 (295)
Q Consensus 285 ~~~ 287 (295)
...
T Consensus 79 ~~~ 81 (85)
T 2jtq_A 79 AMP 81 (85)
T ss_dssp CSC
T ss_pred hcc
Confidence 653
No 34
>3g5j_A Putative ATP/GTP binding protein; N-terminal domain of ATP/GTP binding protein, PSI, MCSG, STR genomics, protein structure initiative; HET: PGE; 1.76A {Clostridium difficile}
Probab=99.82 E-value=3.1e-21 Score=151.45 Aligned_cols=97 Identities=22% Similarity=0.283 Sum_probs=77.0
Q ss_pred cccchhHHHhhhcCCCccccceEEeccChhhhhccCCCCceecCcccccCC-----------------------------
Q 022543 185 QDIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSW----------------------------- 235 (295)
Q Consensus 185 ~~is~~el~~~l~~~~~~~~~~liDvR~~~e~~~ghIpgAinip~~~l~~~----------------------------- 235 (295)
..++++++.+ . .+.++||||++.||..||||||+|||+..+...
T Consensus 5 ~~i~~~el~~---~----~~~~iiDvR~~~e~~~ghIpgA~nip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (134)
T 3g5j_A 5 SVIKIEKALK---L----DKVIFVDVRTEGEYEEDHILNAINMPLFKNNEHNEVGTIYKMQGKHEAIQKGFDYVSYKLKD 77 (134)
T ss_dssp CEECHHHHTT---C----TTEEEEECSCHHHHHHCCCTTCEECCSSCHHHHHHHHHHHHHHCHHHHHHHHHHHHGGGHHH
T ss_pred cccCHHHHHh---c----CCcEEEEcCCHHHHhcCCCCCCEEcCccchhhhhcccceeeecChhHHHhcccccccccHHH
Confidence 4566676654 2 568999999999999999999999999653210
Q ss_pred CCCccccCCCC-CcEEEEe-CCChhHHHHHHHHHHcCCCCeEEecchHHHcccccC
Q 022543 236 GPDITVKFDPQ-KDTYVMC-HHGMRSLQVAQWLQTQGFRRVFNVSGGIHAYATKVD 289 (295)
Q Consensus 236 ~~~~~~~~~~~-~~iv~~C-~~g~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~~~ 289 (295)
....+..++++ ++||+|| ++|.||..+++.|+.+|| ||++|+||+.+|.+...
T Consensus 78 ~~~~~~~~~~~~~~ivvyC~~~G~rs~~a~~~L~~~G~-~v~~l~GG~~~W~~~~~ 132 (134)
T 3g5j_A 78 IYLQAAELALNYDNIVIYCARGGMRSGSIVNLLSSLGV-NVYQLEGGYKAYRNFVL 132 (134)
T ss_dssp HHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHHHTTC-CCEEETTHHHHHHHHHT
T ss_pred HHHHHHHhccCCCeEEEEECCCChHHHHHHHHHHHcCC-ceEEEeCcHHHHHHHhh
Confidence 00112234677 9999999 699999999999999999 99999999999987543
No 35
>4f67_A UPF0176 protein LPG2838; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium; 1.79A {Legionella pneumophila subsp}
Probab=99.80 E-value=1.9e-20 Score=162.95 Aligned_cols=104 Identities=21% Similarity=0.392 Sum_probs=88.2
Q ss_pred ccccchhHHHhhhcCCCccccceEEeccChhhhhccCCCCceecCcccccCCCCCcc--ccCCCCCcEEEEeCCChhHHH
Q 022543 184 LQDIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSWGPDIT--VKFDPQKDTYVMCHHGMRSLQ 261 (295)
Q Consensus 184 ~~~is~~el~~~l~~~~~~~~~~liDvR~~~e~~~ghIpgAinip~~~l~~~~~~~~--~~~~~~~~iv~~C~~g~rs~~ 261 (295)
...++++++.+++.+ .+.++||+|++.||+.||||||+|+|+..+......+. ...+++++||+||.+|.||..
T Consensus 121 ~~~Is~~el~~ll~~----~~~vlIDVR~~~Ey~~GHIpGAiniP~~~~~~~~~~l~~~l~~~kdk~IVvyC~~G~RS~~ 196 (265)
T 4f67_A 121 GTYLSPEEWHQFIQD----PNVILLDTRNDYEYELGTFKNAINPDIENFREFPDYVQRNLIDKKDKKIAMFCTGGIRCEK 196 (265)
T ss_dssp TCEECHHHHHHHTTC----TTSEEEECSCHHHHHHEEETTCBCCCCSSGGGHHHHHHHHTGGGTTSCEEEECSSSHHHHH
T ss_pred CceECHHHHHHHhcC----CCeEEEEeCCchHhhcCcCCCCEeCCHHHHHhhHHHHHHhhhhCCCCeEEEEeCCChHHHH
Confidence 456889999999876 56899999999999999999999999988754221111 123688999999999999999
Q ss_pred HHHHHHHcCCCCeEEecchHHHcccccCCC
Q 022543 262 VAQWLQTQGFRRVFNVSGGIHAYATKVDPS 291 (295)
Q Consensus 262 a~~~L~~~G~~~v~~l~GG~~~W~~~~~p~ 291 (295)
++..|+..||+||++|+||+.+|..+..+.
T Consensus 197 Aa~~L~~~Gf~nV~~L~GGi~aW~~~~~~~ 226 (265)
T 4f67_A 197 TTAYMKELGFEHVYQLHDGILNYLESIPES 226 (265)
T ss_dssp HHHHHHHHTCSSEEEETTHHHHHHHHSCTT
T ss_pred HHHHHHHcCCCCEEEecCHHHHHHHhcCcc
Confidence 999999999999999999999999877654
No 36
>2fsx_A RV0390, COG0607: rhodanese-related sulfurtransferase; RV0390 BR SAD DATA with FBAR, structural genomics, PSI; 1.80A {Mycobacterium tuberculosis}
Probab=99.79 E-value=2.4e-20 Score=149.31 Aligned_cols=96 Identities=20% Similarity=0.278 Sum_probs=73.9
Q ss_pred ccchhHHHhhhcCCCccccceEEeccChhhhhc-cCC------CCceecCcccccC-----CCCCcc-----ccCCCCCc
Q 022543 186 DIQPDELHKKMQDPNFHKEAQLIDVREPEEVAL-SSL------PGFQVLPLRQFGS-----WGPDIT-----VKFDPQKD 248 (295)
Q Consensus 186 ~is~~el~~~l~~~~~~~~~~liDvR~~~e~~~-ghI------pgAinip~~~l~~-----~~~~~~-----~~~~~~~~ 248 (295)
.++++++.+++.+. .+.++||||++.||.. ||| |||+|||+..+.. +...+. ..++++++
T Consensus 6 ~is~~el~~~l~~~---~~~~liDVR~~~e~~~~ghi~~~g~~pgAv~ip~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 82 (148)
T 2fsx_A 6 DITPLQAWEMLSDN---PRAVLVDVRCEAEWRFVGVPDLSSLGREVVYVEWATSDGTHNDNFLAELRDRIPADADQHERP 82 (148)
T ss_dssp EECHHHHHHHHHHC---TTCEEEECSCHHHHHHTCEECCGGGTCCCEECCSBCTTSCBCTTHHHHHHHHCC-------CC
T ss_pred cCCHHHHHHHHhcC---CCeEEEECCCHHHHHhcCCCccccCCCCcEEeeeeccccccCHHHHHHHHHHHhhccCCCCCE
Confidence 57888998888642 4678999999999997 999 9999999987211 000111 12378999
Q ss_pred EEEEeCCChhHHHHHHHHHHcCCCCeEEecchHHHc
Q 022543 249 TYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIHAY 284 (295)
Q Consensus 249 iv~~C~~g~rs~~a~~~L~~~G~~~v~~l~GG~~~W 284 (295)
|||||++|.||..++..|+.+||+||++|+||+.+|
T Consensus 83 ivvyC~~G~rS~~aa~~L~~~G~~~v~~l~GG~~~w 118 (148)
T 2fsx_A 83 VIFLCRSGNRSIGAAEVATEAGITPAYNVLDGFEGH 118 (148)
T ss_dssp EEEECSSSSTHHHHHHHHHHTTCCSEEEETTTTTCC
T ss_pred EEEEcCCChhHHHHHHHHHHcCCcceEEEcCChhhh
Confidence 999999999999999999999999999999999433
No 37
>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}
Probab=99.79 E-value=1.6e-19 Score=161.13 Aligned_cols=105 Identities=18% Similarity=0.184 Sum_probs=88.5
Q ss_pred cccchhHHHhhhcCCCccccceEEeccChhhh-----------hccCCCCceecCcccccCCCCCc---------c--cc
Q 022543 185 QDIQPDELHKKMQDPNFHKEAQLIDVREPEEV-----------ALSSLPGFQVLPLRQFGSWGPDI---------T--VK 242 (295)
Q Consensus 185 ~~is~~el~~~l~~~~~~~~~~liDvR~~~e~-----------~~ghIpgAinip~~~l~~~~~~~---------~--~~ 242 (295)
..++.+++.+.+.+ .+.++||+|++.|| ..||||||+|||+..+......+ + ..
T Consensus 175 ~~i~~~e~~~~~~~----~~~~liDvR~~~ef~G~~~~p~~~~~~GhIpGAiniP~~~l~~~~~~~~~~~~l~~~~~~~~ 250 (302)
T 3olh_A 175 FIKTYEDIKENLES----RRFQVVDSRATGRFRGTEPEPRDGIEPGHIPGTVNIPFTDFLSQEGLEKSPEEIRHLFQEKK 250 (302)
T ss_dssp GEECHHHHHHHHHH----CCSEEEECSCHHHHHTSSCCSSTTCCCCCCTTCEECCGGGGBCSSSCBCCHHHHHHHHHHTT
T ss_pred ceecHHHHHHhhcC----CCcEEEecCCHHHccccccCCCcCCcCccCCCceecCHHHhcCCCCccCCHHHHHHHHHhcC
Confidence 34777888888764 46789999999999 78999999999998875432211 0 14
Q ss_pred CCCCCcEEEEeCCChhHHHHHHHHHHcCCCCeEEecchHHHcccccCCCCC
Q 022543 243 FDPQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIHAYATKVDPSIP 293 (295)
Q Consensus 243 ~~~~~~iv~~C~~g~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~~~p~~p 293 (295)
++++++||+||++|.||+.++..|+.+||++|++|+|||.+|...+.|.+.
T Consensus 251 ~~~~~~iv~yC~sG~rs~~a~~~L~~~G~~~v~~~~Gg~~~W~~~~~P~~~ 301 (302)
T 3olh_A 251 VDLSKPLVATCGSGVTACHVALGAYLCGKPDVPIYDGSWVEWYMRARPEDV 301 (302)
T ss_dssp CCTTSCEEEECSSSSTTHHHHHHHHTTTCCCCCEESSHHHHHHHHHCCCC-
T ss_pred CCCCCCEEEECCChHHHHHHHHHHHHcCCCCeeEeCCcHHHHhhccCCCCC
Confidence 678999999999999999999999999999999999999999999998764
No 38
>1vee_A Proline-rich protein family; hypothetical protein, structural genomics, rhodanese domain, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} PDB: 2dcq_A
Probab=99.77 E-value=4.8e-20 Score=145.16 Aligned_cols=106 Identities=15% Similarity=0.184 Sum_probs=82.8
Q ss_pred ccccchhHHHhhhcCCCccccceEEeccChhhhhccC-C------CCceecCcccccC--CCCCcccc--CCCCCcEEEE
Q 022543 184 LQDIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSS-L------PGFQVLPLRQFGS--WGPDITVK--FDPQKDTYVM 252 (295)
Q Consensus 184 ~~~is~~el~~~l~~~~~~~~~~liDvR~~~e~~~gh-I------pgAinip~~~l~~--~~~~~~~~--~~~~~~iv~~ 252 (295)
...++++++.+++.+. .+.++||||++.||..+| + |||+|||+..+.. +...+... ++++++||||
T Consensus 4 ~~~is~~e~~~~l~~~---~~~~liDVR~~~E~~~~~~~~~~g~~~ga~~ip~~~~~~~~~~~~l~~~~~~~~~~~ivv~ 80 (134)
T 1vee_A 4 GSSGSAKNAYTKLGTD---DNAQLLDIRATADFRQVGSPNIKGLGKKAVSTVYNGEDKPGFLKKLSLKFKDPENTTLYIL 80 (134)
T ss_dssp SCBCCHHHHHHHHHHC---TTEEEEECSCHHHHHHTCEECCTTTSCCCEECCCCGGGHHHHHHHHHTTCSCGGGCEEEEE
T ss_pred CCccCHHHHHHHHHhC---CCeEEEEcCCHHHHhhcCCCcccccCCceEEeecccccChhHHHHHHHHhCCCCCCEEEEE
Confidence 3458888998888632 467899999999998633 3 7999999876421 10111111 2678999999
Q ss_pred eCCChhHHHHHHHHHHcCCCCeEEecchH---HHcccccCCCC
Q 022543 253 CHHGMRSLQVAQWLQTQGFRRVFNVSGGI---HAYATKVDPSI 292 (295)
Q Consensus 253 C~~g~rs~~a~~~L~~~G~~~v~~l~GG~---~~W~~~~~p~~ 292 (295)
|++|.||..++..|+.+||+||++|.||+ .+|...+.|..
T Consensus 81 C~sG~RS~~aa~~L~~~G~~~v~~l~GG~~~~~~W~~~g~p~~ 123 (134)
T 1vee_A 81 DKFDGNSELVAELVALNGFKSAYAIKDGAEGPRGWLNSSLPWI 123 (134)
T ss_dssp CSSSTTHHHHHHHHHHHTCSEEEECTTTTTSTTSSGGGTCCEE
T ss_pred eCCCCcHHHHHHHHHHcCCcceEEecCCccCCcchhhcCCCCC
Confidence 99999999999999999999999999999 78999887743
No 39
>1c25_A CDC25A; hydrolase, cell cycle phosphatase,dual specificity protein phosphatase, CDK2; 2.30A {Homo sapiens} SCOP: c.46.1.1
Probab=99.77 E-value=2.1e-19 Score=145.85 Aligned_cols=107 Identities=17% Similarity=0.210 Sum_probs=83.0
Q ss_pred hccccchhHHHhhhcCCCc--cccceEEeccChhhhhccCCCCceecCcccccCC-CCCccccC-CCCCcE--EEEeC-C
Q 022543 183 LLQDIQPDELHKKMQDPNF--HKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSW-GPDITVKF-DPQKDT--YVMCH-H 255 (295)
Q Consensus 183 ~~~~is~~el~~~l~~~~~--~~~~~liDvR~~~e~~~ghIpgAinip~~~l~~~-~~~~~~~~-~~~~~i--v~~C~-~ 255 (295)
....++++++.+++.+... ..+.++||||++.||..||||||+|||+..+... ... ...+ ++++++ |+||. +
T Consensus 21 ~~~~is~~el~~~l~~~~~~~~~~~~liDvR~~~e~~~ghIpgAinip~~~~~~~~~~~-~~~~~~~~~~ivvv~yC~~s 99 (161)
T 1c25_A 21 DLKYISPEIMASVLNGKFANLIKEFVIIDCRYPYEYEGGHIKGAVNLHMEEEVEDFLLK-KPIVPTDGKRVIVVFHCEFS 99 (161)
T ss_dssp TSCEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTCEECCSHHHHHHHTTT-SCCCCCTTSEEEEEEECSSS
T ss_pred CcceeCHHHHHHHHhccccccCCCeEEEECCChHHccCCcccCcEeCChhHHHHHHHhh-hhhccCCCCCeEEEEEcCCC
Confidence 3456888999998875210 0257899999999999999999999999876321 111 1112 577886 67899 9
Q ss_pred ChhHHHHHHHHHH----------cCCCCeEEecchHHHcccccCC
Q 022543 256 GMRSLQVAQWLQT----------QGFRRVFNVSGGIHAYATKVDP 290 (295)
Q Consensus 256 g~rs~~a~~~L~~----------~G~~~v~~l~GG~~~W~~~~~p 290 (295)
|.||..++..|+. +||+||++|+||+.+|...+.|
T Consensus 100 g~rs~~aa~~L~~~~~~~~~l~~~G~~~v~~l~GG~~~W~~~~~~ 144 (161)
T 1c25_A 100 SERGPRMCRYVRERDRLGNEYPKLHYPELYVLKGGYKEFFMKCQS 144 (161)
T ss_dssp SSHHHHHHHHHHHHHHHTSSTTCCSSCCEEEETTHHHHHHHHHGG
T ss_pred CcchHHHHHHHHHHHHhhhhccccCCceEEEEcCCHHHHHHHccc
Confidence 9999999999986 4999999999999999876543
No 40
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=99.77 E-value=8.4e-19 Score=153.99 Aligned_cols=103 Identities=17% Similarity=0.209 Sum_probs=86.3
Q ss_pred cccchhHHHhhhcCCCccccceEEeccChhhhh--------ccCCCCceecCcccccCCCC---------Cccc--cCCC
Q 022543 185 QDIQPDELHKKMQDPNFHKEAQLIDVREPEEVA--------LSSLPGFQVLPLRQFGSWGP---------DITV--KFDP 245 (295)
Q Consensus 185 ~~is~~el~~~l~~~~~~~~~~liDvR~~~e~~--------~ghIpgAinip~~~l~~~~~---------~~~~--~~~~ 245 (295)
..++.+++.+.+.+ .+..+||||++.||. .||||||+|+|+..+..... ..+. .+++
T Consensus 147 ~~i~~~~l~~~l~~----~~~~liDvR~~~e~~g~~~~~~~~ghIpgA~~ip~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 222 (271)
T 1e0c_A 147 PTASRDYLLGRLGA----ADLAIWDARSPQEYRGEKVLAAKGGHIPGAVNFEWTAAMDPSRALRIRTDIAGRLEELGITP 222 (271)
T ss_dssp TBCCHHHHHHHTTC----TTEEEEECSCHHHHTTSSCCSSSCSBCTTCEECCGGGGEEGGGTTEECTTHHHHHHHTTCCT
T ss_pred ccccHHHHHHHhcC----CCcEEEEcCChhhcCCccCCCCcCCcCCCceeccHHHhCCCCCCCCCHHHHHHHHHHcCCCC
Confidence 34788889888875 457899999999999 89999999999988753210 0122 4688
Q ss_pred CCcEEEEeCCChhHHHHHHHHHHcCCCCeEEecchHHHcccc-cCCC
Q 022543 246 QKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIHAYATK-VDPS 291 (295)
Q Consensus 246 ~~~iv~~C~~g~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~-~~p~ 291 (295)
+++||+||.+|.||..++..|+.+||+||++|+|||.+|... +.|.
T Consensus 223 ~~~ivvyC~~G~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~~~~pv 269 (271)
T 1e0c_A 223 DKEIVTHCQTHHRSGLTYLIAKALGYPRVKGYAGSWGEWGNHPDTPV 269 (271)
T ss_dssp TSEEEEECSSSSHHHHHHHHHHHTTCSCEEECSSHHHHHTTCTTCCC
T ss_pred CCCEEEECCchHHHHHHHHHHHHcCCCCceeeCCcHHHHhcCCCCCC
Confidence 999999999999999999999999999999999999999887 5554
No 41
>1qb0_A Protein (M-phase inducer phosphatase 2 (CDC25B)); hydrolase, cell cycle phosphatase, dual specificity protein phosphatase; 1.91A {Homo sapiens} SCOP: c.46.1.1 PDB: 1cwr_A 1cws_A 2uzq_A
Probab=99.75 E-value=4.6e-19 Score=150.15 Aligned_cols=108 Identities=14% Similarity=0.192 Sum_probs=84.1
Q ss_pred hhccccchhHHHhhhcCCC--ccccceEEeccChhhhhccCCCCceecCcccccCC-CCCccccCC--CCCcE--EEEeC
Q 022543 182 SLLQDIQPDELHKKMQDPN--FHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSW-GPDITVKFD--PQKDT--YVMCH 254 (295)
Q Consensus 182 ~~~~~is~~el~~~l~~~~--~~~~~~liDvR~~~e~~~ghIpgAinip~~~l~~~-~~~~~~~~~--~~~~i--v~~C~ 254 (295)
.....++++++.+++.+.. ...+.++||||++.||..||||||+|||+..+... ... ...++ ++++| |+||.
T Consensus 41 ~~~~~Is~~el~~~l~~~~~~~~~~~~lIDvR~~~Ey~~gHIpGAinip~~~l~~~~~~~-~~~l~~~~d~~ivvVvyC~ 119 (211)
T 1qb0_A 41 QDLKYISPETMVALLTGKFSNIVDKFVIVDCRYPYEYEGGHIKTAVNLPLERDAESFLLK-SPIAPCSLDKRVILIFHCE 119 (211)
T ss_dssp TTSCEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTCEECCSHHHHHHHHHT-TTCCCSSTTSEEEEEEECS
T ss_pred CCCCeeCHHHHHHHHhcccccCCCCEEEEECCCHHHHccCcCCCCEECCchHHHHHhhhh-hhhccccCCCCeEEEEECC
Confidence 3456688999999887520 00257899999999999999999999999775321 100 11233 78887 78899
Q ss_pred -CChhHHHHHHHHHH----------cCCCCeEEecchHHHcccccCC
Q 022543 255 -HGMRSLQVAQWLQT----------QGFRRVFNVSGGIHAYATKVDP 290 (295)
Q Consensus 255 -~g~rs~~a~~~L~~----------~G~~~v~~l~GG~~~W~~~~~p 290 (295)
+|.||..++..|+. +||++|++|+||+.+|...+.|
T Consensus 120 ~sG~rs~~aa~~L~~~~~~~~~l~~~G~~~V~~L~GG~~~W~~~g~~ 166 (211)
T 1qb0_A 120 FSSERGPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQHPN 166 (211)
T ss_dssp SSSSHHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGG
T ss_pred CCCccHHHHHHHHHhhhhhhhhhhhcCCCeEEEECCHHHHHHHHCcc
Confidence 99999999999986 6999999999999999887654
No 42
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=99.75 E-value=2.1e-18 Score=151.49 Aligned_cols=102 Identities=20% Similarity=0.281 Sum_probs=85.7
Q ss_pred ccchhHHHhhhcCCCccccceEEeccChhhhhccCCCCceecCcccccCCCCC-------------ccc--cCCCCCcEE
Q 022543 186 DIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSWGPD-------------ITV--KFDPQKDTY 250 (295)
Q Consensus 186 ~is~~el~~~l~~~~~~~~~~liDvR~~~e~~~ghIpgAinip~~~l~~~~~~-------------~~~--~~~~~~~iv 250 (295)
.++++++.+++.+ .+.++||||++.||..||||||+|+|+..+...... .+. .++++++||
T Consensus 10 ~is~~~l~~~l~~----~~~~iiDvR~~~ey~~ghIpgA~~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~vv 85 (271)
T 1e0c_A 10 VIEPADLQARLSA----PELILVDLTSAARYAEGHIPGARFVDPKRTQLGQPPAPGLQPPREQLESLFGELGHRPEAVYV 85 (271)
T ss_dssp EECHHHHHTTTTC----TTEEEEECSCHHHHHHCBSTTCEECCGGGGSCCCTTCTTSCCCHHHHHHHHHHHTCCTTCEEE
T ss_pred eeeHHHHHHhccC----CCeEEEEcCCcchhhhCcCCCCEECCHHHhccCCCCCCCCCCCHHHHHHHHHHcCCCCCCeEE
Confidence 5888999888864 467899999999999999999999999887543100 011 257899999
Q ss_pred EEeCCCh-hHHHHHHHHHHcCCCCeEEecchHHHcccccCCC
Q 022543 251 VMCHHGM-RSLQVAQWLQTQGFRRVFNVSGGIHAYATKVDPS 291 (295)
Q Consensus 251 ~~C~~g~-rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~~~p~ 291 (295)
|||.+|. +|..+++.|+.+||++|++|+||+.+|...+.|.
T Consensus 86 vyc~~g~~~s~~a~~~L~~~G~~~v~~L~GG~~~w~~~g~p~ 127 (271)
T 1e0c_A 86 VYDDEGGGWAGRFIWLLDVIGQQRYHYLNGGLTAWLAEDRPL 127 (271)
T ss_dssp EECSSSSHHHHHHHHHHHHTTCCCEEEETTHHHHHHHTTCCC
T ss_pred EEcCCCCccHHHHHHHHHHcCCCCeEEecCCHHHHHHcCCCc
Confidence 9999988 9999999999999999999999999998877653
No 43
>2a2k_A M-phase inducer phosphatase 2; dual specificity, substrate trapping, active site mutant, hydrolase; 1.52A {Homo sapiens} PDB: 2ifv_A 1ymd_A 1ym9_A 1ymk_A 1yml_A 1ys0_A 1cwt_A 2ifd_A
Probab=99.75 E-value=5.1e-19 Score=145.51 Aligned_cols=108 Identities=13% Similarity=0.154 Sum_probs=80.2
Q ss_pred hccccchhHHHhhhcCCCc--cccceEEeccChhhhhccCCCCceecCcccccCC-CCC-ccccCCCCCcEEE--EeC-C
Q 022543 183 LLQDIQPDELHKKMQDPNF--HKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSW-GPD-ITVKFDPQKDTYV--MCH-H 255 (295)
Q Consensus 183 ~~~~is~~el~~~l~~~~~--~~~~~liDvR~~~e~~~ghIpgAinip~~~l~~~-~~~-~~~~~~~~~~iv~--~C~-~ 255 (295)
....++++++.+++.+... ..+.++||||++.||..||||||+|||+..+... ... .+...+++++||| ||+ +
T Consensus 22 ~~~~is~~el~~~l~~~~~~~~~~~~liDvR~~~ey~~ghIpgAinip~~~l~~~~~~~~~~~~~~~~~~ivvv~yC~~~ 101 (175)
T 2a2k_A 22 DLKYISPETMVALLTGKFSNIVDKFVIVDCRYPYEYEGGHIKTAVNLPLERDAESFLLKSPIAPCSLDKRVILIFHSEFS 101 (175)
T ss_dssp TSCEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTCEECCSHHHHHHHHHSSCCCC----CEEEEEEECSSS
T ss_pred CCceeCHHHHHHHHhcccccCCCCEEEEECCCHHHHcCCcCCCcEECChhHHHHHhhhhhhhccccCCCCeEEEEECCCC
Confidence 3566889999998875200 0257899999999999999999999999876321 100 0111237888754 699 9
Q ss_pred ChhHHHHHHHHHH----------cCCCCeEEecchHHHcccccCC
Q 022543 256 GMRSLQVAQWLQT----------QGFRRVFNVSGGIHAYATKVDP 290 (295)
Q Consensus 256 g~rs~~a~~~L~~----------~G~~~v~~l~GG~~~W~~~~~p 290 (295)
|.||..++..|++ +||+||++|+||+.+|...+.|
T Consensus 102 g~rs~~aa~~L~~~~~~~~~l~~~G~~~V~~L~GG~~~W~~~~~~ 146 (175)
T 2a2k_A 102 SERGPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQHPN 146 (175)
T ss_dssp SSHHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGG
T ss_pred CCccHHHHHHHHHhhhhhhhhhhcCCceEEEEcCCHHHHHHHCcc
Confidence 9999999999985 4999999999999999887654
No 44
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=99.75 E-value=4.2e-19 Score=156.68 Aligned_cols=103 Identities=17% Similarity=0.187 Sum_probs=80.4
Q ss_pred cccchhHHHhhhcCCCccccceEEeccChhhh-----------hccCCCCceecCcccccCCCCC-----cc------cc
Q 022543 185 QDIQPDELHKKMQDPNFHKEAQLIDVREPEEV-----------ALSSLPGFQVLPLRQFGSWGPD-----IT------VK 242 (295)
Q Consensus 185 ~~is~~el~~~l~~~~~~~~~~liDvR~~~e~-----------~~ghIpgAinip~~~l~~~~~~-----~~------~~ 242 (295)
..++.+++.+.+.+ .+.++||||++.|| ..||||||+|||+..+... .. .+ ..
T Consensus 152 ~~i~~~e~~~~~~~----~~~~liDvR~~~e~~G~~~~~~~~~~~ghIpgA~nip~~~~~~~-~~~~~~~~l~~~~~~~~ 226 (280)
T 1urh_A 152 AVVKVTDVLLASHE----NTAQIIDARPAARFNAEVDEPRPGLRRGHIPGALNVPWTELVRE-GELKTTDELDAIFFGRG 226 (280)
T ss_dssp GBCCHHHHHHHHHH----TCSEEEECSCHHHHSSCCCC----CCSSSCTTCEECCGGGGBSS-SSBCCHHHHHHHHHTTT
T ss_pred cEEcHHHHHHHhcC----CCcEEEeCCchhhcccccCCCCCCCcCccCCCceEeeHHHhhcC-CccCCHHHHHHHHHHcC
Confidence 45888899888865 45789999999999 6899999999999887651 10 11 14
Q ss_pred CCCCCcEEEEeCCChhHHHHHHHHHHcCCCCeEEecchHHHcccc-cCCCC
Q 022543 243 FDPQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIHAYATK-VDPSI 292 (295)
Q Consensus 243 ~~~~~~iv~~C~~g~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~-~~p~~ 292 (295)
++++++||+||++|.||..++..|+.+||+||++|+|||.+|... +.|..
T Consensus 227 ~~~~~~ivv~C~~G~rs~~a~~~L~~~G~~~v~~~~GG~~~W~~~~~~Pv~ 277 (280)
T 1urh_A 227 VSYDKPIIVSCGSGVTAAVVLLALATLDVPNVKLYDGAWSEWGARADLPVE 277 (280)
T ss_dssp CCSSSCEEEECCSSSTHHHHHHHHHHTTCSSCEEECCSCCC----------
T ss_pred CCCCCCEEEECChHHHHHHHHHHHHHcCCCCceeeCChHHHHhcCCCCCce
Confidence 678999999999999999999999999999999999999999874 66653
No 45
>3rfw_A Cell-binding factor 2; SURA-like, chaperone; 2.20A {Campylobacter jejuni}
Probab=99.75 E-value=4.4e-19 Score=154.33 Aligned_cols=112 Identities=25% Similarity=0.488 Sum_probs=93.2
Q ss_pred ccCchhhhc-cccCCCCCCCCCCCceEEEeeEEeccchHHHHHHHHHHhC--CC----CcHHHHHHHhCCCC-CccCCCc
Q 022543 65 SFTSPKAAS-FSSGTEGSSPGGGDREILVQHLLVKEDDLNLLSELQRRVS--QG----KDLSDLAVEHSICP-SKGEGGM 136 (295)
Q Consensus 65 ~~~~~e~~~-y~~~~~~~~~~~~~~~~~~~~Il~~~~~~~~a~~i~~~i~--~g----~~F~~~a~~~S~d~-~~~~gG~ 136 (295)
.+++.+... |..+.. .+..+++++++||+++.++. |++++++|+ +| ++|+++|++||+|+ ++.+||+
T Consensus 90 ~vtd~ei~~~Y~~~~~---~f~~~~~~~~~~I~~~~~~~--A~~~~~~l~~~~g~~~~~~F~~lA~~~S~~~~~~~~gGd 164 (252)
T 3rfw_A 90 KIDAAKVKAFYDQNKD---KYVKPARVQAKHILVATEKE--AKDIINELKGLKGKELDAKFSELAKEKSIDPGSKNQGGE 164 (252)
T ss_dssp CCCHHHHHHHHHHHGG---GSEECCEEEEEEEEESSHHH--HHHHHHHHTTCCHHHHHHHHHHHHHHHCCCTTTGGGTTE
T ss_pred CCCHHHHHHHHHHhHH---hccccceEEEEEEEeCCHHH--HHHHHHHHHhhcCCCccccHHHHHHHhCCCCchhhcCCc
Confidence 445555533 333331 23467899999999998755 999999999 55 49999999999999 6667999
Q ss_pred ccceeCCCCcHHHHHHHhcCCCCcee--eeeecCceeeeehhhhhhh
Q 022543 137 LGWVRKGQLVPEFEEVAFTTPLNKVA--RCKTKFGWHLLQVLSEREA 181 (295)
Q Consensus 137 lg~~~~~~~~~~~~~~~~~l~~g~is--pv~~~~G~~ii~v~~~~~~ 181 (295)
+||+..++++|+|.+++++|++|++| |+++++||||+++.++++.
T Consensus 165 lg~~~~~~l~~~f~~a~~~l~~G~is~~pv~t~~G~hii~v~~~~~~ 211 (252)
T 3rfw_A 165 LGWFDQSTMVKPFTDAAFALKNGTITTTPVKTNFGYHVILKENSQAK 211 (252)
T ss_dssp EEEECSSSSCHHHHHHHHHSCTTEECSSCEEETTEEEEEEEEEEECC
T ss_pred ccccccccccHHHHHHHHcCCCCCccCceEEECCEEEEEEEEEecCC
Confidence 99999999999999999999999998 7999999999999987754
No 46
>2j6p_A SB(V)-AS(V) reductase; arsenate reductase, antimonate reductase, CDC25 phosphatase, rhodanese, C-MYC epitope, oxidoreductase; HET: EPE; 2.15A {Leishmania major}
Probab=99.75 E-value=3.7e-19 Score=143.06 Aligned_cols=107 Identities=18% Similarity=0.259 Sum_probs=78.5
Q ss_pred ccccchhHHHhhhcCCCccccceEEeccChhhhhccCCCCceecCcccccC-CCCCccccC-CCCC-cEEEEe-CCChhH
Q 022543 184 LQDIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGS-WGPDITVKF-DPQK-DTYVMC-HHGMRS 259 (295)
Q Consensus 184 ~~~is~~el~~~l~~~~~~~~~~liDvR~~~e~~~ghIpgAinip~~~l~~-~~~~~~~~~-~~~~-~iv~~C-~~g~rs 259 (295)
...++++++.+++.+.....+.++||||++ ||..||||||+|||+..+.. ....+...+ ++++ .||+|| .+|.||
T Consensus 4 ~~~Is~~el~~~l~~~~~~~~~~lIDvR~~-ey~~gHIpGAinip~~~l~~~~~~~l~~~l~~~~~~~vV~yC~~sg~rs 82 (152)
T 2j6p_A 4 YTYIKPEELVELLDNPDSLVKAAVIDCRDS-DRDCGFIVNSINMPTISCTEEMYEKLAKTLFEEKKELAVFHCAQSLVRA 82 (152)
T ss_dssp CEEECHHHHHHHHHSHHHHHTEEEEECCST-TGGGCBCTTCEECCTTTCCHHHHHHHHHHHHHTTCCEEEEECSSSSSHH
T ss_pred cCccCHHHHHHHHhCCCCCCCEEEEEcCcH-HhCcCcCCCcEECChhHhhHHHHHHHHHHhcccCCCEEEEEcCCCCCcc
Confidence 345788889888864100025789999999 99999999999999987642 111111111 1344 577779 799999
Q ss_pred HHHH----HHHHHcCC--CCeEEecchHHHcccccCCC
Q 022543 260 LQVA----QWLQTQGF--RRVFNVSGGIHAYATKVDPS 291 (295)
Q Consensus 260 ~~a~----~~L~~~G~--~~v~~l~GG~~~W~~~~~p~ 291 (295)
..++ ..|+..|| .+|++|+||+.+|...+.+.
T Consensus 83 ~~aa~~~~~~L~~~G~~~~~v~~L~GG~~~W~~~g~~~ 120 (152)
T 2j6p_A 83 PKGANRFALAQKKLGYVLPAVYVLRGGWEAFYHMYGDV 120 (152)
T ss_dssp HHHHHHHHHHHHHHTCCCSEEEEETTHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHcCCCCCCEEEEcCcHHHHHHHcCCC
Confidence 8888 77788997 58999999999998877653
No 47
>2vsw_A Dual specificity protein phosphatase 16; hydrolase, dual specificity phosphatase, nucleus, cytoplasm, rhodanese domain, CAsp8; 2.20A {Homo sapiens} PDB: 3tg3_A
Probab=99.75 E-value=6.7e-19 Score=141.60 Aligned_cols=101 Identities=16% Similarity=0.170 Sum_probs=78.2
Q ss_pred cccchhHHHhhhcCCCccccceEEeccChhhhhccCCCCceecCccccc-CCC--C-----Cc-----c--ccCCCCCcE
Q 022543 185 QDIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFG-SWG--P-----DI-----T--VKFDPQKDT 249 (295)
Q Consensus 185 ~~is~~el~~~l~~~~~~~~~~liDvR~~~e~~~ghIpgAinip~~~l~-~~~--~-----~~-----~--~~~~~~~~i 249 (295)
..++++++.+++.+.. .+.++||||++.||..||||||+|||+..+. ... . .+ . ..++++++|
T Consensus 4 ~~Is~~~l~~~l~~~~--~~~~iiDvR~~~ey~~gHIpgAinip~~~l~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~i 81 (153)
T 2vsw_A 4 TQIVTERLVALLESGT--EKVLLIDSRPFVEYNTSHILEAININCSKLMKRRLQQDKVLITELIQHSAKHKVDIDCSQKV 81 (153)
T ss_dssp EEECHHHHHHHHTSTT--CCEEEEECSCHHHHHHCEETTCEECCCCHHHHHHHHTTSSCHHHHHHHSCSSCCCCCTTSEE
T ss_pred ccccHHHHHHHHhcCC--CCEEEEECCCHHHhccCccCCCeeeChHHHHHhhhhcCCcCHHHhcCchhhhhhccCCCCeE
Confidence 3577889999886421 4678999999999999999999999998762 100 0 00 0 124788999
Q ss_pred EEEeCCChhHHHH------HHHHHHc--CCCCeEEecchHHHcccc
Q 022543 250 YVMCHHGMRSLQV------AQWLQTQ--GFRRVFNVSGGIHAYATK 287 (295)
Q Consensus 250 v~~C~~g~rs~~a------~~~L~~~--G~~~v~~l~GG~~~W~~~ 287 (295)
||||.+|.++..+ +..|+.+ ||.+|++|+||+.+|...
T Consensus 82 Vvyc~~g~~s~~a~~~~~~~~~L~~l~~G~~~v~~L~GG~~~W~~~ 127 (153)
T 2vsw_A 82 VVYDQSSQDVASLSSDCFLTVLLGKLEKSFNSVHLLAGGFAEFSRC 127 (153)
T ss_dssp EEECSSCCCGGGSCTTSHHHHHHHHHHHHCSCEEEETTHHHHHHHH
T ss_pred EEEeCCCCcccccccchHHHHHHHHHHhCCCcEEEEeChHHHHHHh
Confidence 9999999998765 5777744 999999999999999764
No 48
>3op3_A M-phase inducer phosphatase 3; structural genomics, structural genomics consortium, SGC, Al alpha sandwich, kinase, cytosol, hydrolase; 2.63A {Homo sapiens}
Probab=99.75 E-value=1.1e-18 Score=147.81 Aligned_cols=105 Identities=17% Similarity=0.259 Sum_probs=79.0
Q ss_pred hccccchhHHHhhhcCCC--ccccceEEeccChhhhhccCCCCceecCccc-ccCCC-CCccccCCCCCc--EEEEeC-C
Q 022543 183 LLQDIQPDELHKKMQDPN--FHKEAQLIDVREPEEVALSSLPGFQVLPLRQ-FGSWG-PDITVKFDPQKD--TYVMCH-H 255 (295)
Q Consensus 183 ~~~~is~~el~~~l~~~~--~~~~~~liDvR~~~e~~~ghIpgAinip~~~-l~~~~-~~~~~~~~~~~~--iv~~C~-~ 255 (295)
....|+++++.+++.... ..++.++||||.+.||..||||||+|||+.+ +.... .......+++++ ||+||. +
T Consensus 55 ~~~~Is~~eL~~~l~~~~~~~~~~~~lIDVR~~~Ey~~GHIpGAinIP~~~~l~~~l~~~~~~~~~~~k~~~VVvyC~~S 134 (216)
T 3op3_A 55 DLKYVNPETVAALLSGKFQGLIEKFYVIDCRYPYEYLGGHIQGALNLYSQEELFNFFLKKPIVPLDTQKRIIIVFHCEFS 134 (216)
T ss_dssp SSEEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTSEETTCEECCSHHHHHHHHTSSCCCCSSTTSEEEEEEECCC-
T ss_pred CCCEeCHHHHHHHHhCCCccccCCEEEEEeCcHHHHhcCCccCCEECChHHHHHHHHhhccccccccCCCCEEEEEeCCC
Confidence 356799999999987631 0025789999999999999999999999975 32110 000111234554 999999 9
Q ss_pred ChhHHHHHHHHHHc----------CCCCeEEecchHHHcccc
Q 022543 256 GMRSLQVAQWLQTQ----------GFRRVFNVSGGIHAYATK 287 (295)
Q Consensus 256 g~rs~~a~~~L~~~----------G~~~v~~l~GG~~~W~~~ 287 (295)
|.||..++..|+.. ||++|++|+||+.+|..+
T Consensus 135 G~Rs~~aa~~L~~~~~~~~~y~~lGf~~V~~L~GG~~aW~~~ 176 (216)
T 3op3_A 135 SERGPRMCRCLREEDRSLNQYPALYYPELYILKGGYRDFFPE 176 (216)
T ss_dssp -CCHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTT
T ss_pred ChHHHHHHHHHHHcCcccccccccCCCcEEEECCcHHHHHHh
Confidence 99999999999876 899999999999999875
No 49
>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A
Probab=99.75 E-value=1.7e-18 Score=154.09 Aligned_cols=102 Identities=17% Similarity=0.151 Sum_probs=84.7
Q ss_pred cccchhHHHhhhcCCCccccceEEeccChhhh------------hccCCCCceecCcccccCCCCC---------ccc--
Q 022543 185 QDIQPDELHKKMQDPNFHKEAQLIDVREPEEV------------ALSSLPGFQVLPLRQFGSWGPD---------ITV-- 241 (295)
Q Consensus 185 ~~is~~el~~~l~~~~~~~~~~liDvR~~~e~------------~~ghIpgAinip~~~l~~~~~~---------~~~-- 241 (295)
..++.+++.+.+.+ .+.++||||++.|| ..||||||+|||+..+...... .+.
T Consensus 160 ~~i~~~e~~~~~~~----~~~~liDvR~~~e~~G~~~~~~~~~~~~ghIpgA~nip~~~l~~~~~~~~~~~~l~~~~~~~ 235 (296)
T 1rhs_A 160 LLKTYEQVLENLES----KRFQLVDSRAQGRYLGTQPEPDAVGLDSGHIRGSVNMPFMNFLTEDGFEKSPEELRAMFEAK 235 (296)
T ss_dssp GEECHHHHHHHHHH----CCSEEEECSCHHHHHTSSCCSSSSSCCCCEETTCEECCGGGGBCTTSCBCCHHHHHHHHHHT
T ss_pred eEEcHHHHHHHhcC----CCceEEeCCchhhcccccCCcccCCCcCccCCCCEeecHHHhcCCCCcCCCHHHHHHHHHHc
Confidence 45788888888764 45789999999999 7899999999999887542111 111
Q ss_pred cCCCCCcEEEEeCCChhHHHHHHHHHHcCCCCeEEecchHHHccc-ccCC
Q 022543 242 KFDPQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIHAYAT-KVDP 290 (295)
Q Consensus 242 ~~~~~~~iv~~C~~g~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~-~~~p 290 (295)
.++++++||+||.+|.||..++..|+.+||+||++|+|||.+|.. .+.|
T Consensus 236 ~~~~~~~ivv~C~sG~rs~~a~~~L~~~G~~~v~~~~GG~~~W~~~~~~p 285 (296)
T 1rhs_A 236 KVDLTKPLIATCRKGVTACHIALAAYLCGKPDVAIYDGSWFEWFHRAPPE 285 (296)
T ss_dssp TCCTTSCEEEECSSSSTHHHHHHHHHHTTCCCCEEESSHHHHHHHHSCGG
T ss_pred CCCCCCCEEEECCcHHHHHHHHHHHHHcCCCCceeeCCcHHHHhcCCCCC
Confidence 367899999999999999999999999999999999999999987 4444
No 50
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=99.74 E-value=4.3e-18 Score=150.23 Aligned_cols=102 Identities=19% Similarity=0.209 Sum_probs=84.8
Q ss_pred ccchhHHHhhhcCCCccccceEEecc----------ChhhhhccCCCCceecCcccccCCCC-------------Cccc-
Q 022543 186 DIQPDELHKKMQDPNFHKEAQLIDVR----------EPEEVALSSLPGFQVLPLRQFGSWGP-------------DITV- 241 (295)
Q Consensus 186 ~is~~el~~~l~~~~~~~~~~liDvR----------~~~e~~~ghIpgAinip~~~l~~~~~-------------~~~~- 241 (295)
.++++++.+++.+ .+.++||+| ++.||..||||||+|+|+..+..... ..+.
T Consensus 5 ~is~~~l~~~l~~----~~~~iiDvR~~~~~~~~~~~~~e~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~ 80 (280)
T 1urh_A 5 FVGADWLAEHIDD----PEIQIIDARMASPGQEDRNVAQEYLNGHIPGAVFFDIEALSDHTSPLPHMLPRPETFAVAMRE 80 (280)
T ss_dssp EECHHHHHTTTTC----TTEEEEECCCCCSSCTTCCHHHHHHHSBCTTCEECCGGGGSCSSSSSSSCCCCHHHHHHHHHH
T ss_pred eeeHHHHHHhcCC----CCeEEEEeeccCCcccccchhhhhhhCcCCCCEECCHHHhcCCCCCCCCCCCCHHHHHHHHHH
Confidence 4788899888865 467999999 78999999999999999987643211 0111
Q ss_pred -cCCCCCcEEEEeCCChh-HHHHHHHHHHcCCCCeEEecchHHHcccccCCC
Q 022543 242 -KFDPQKDTYVMCHHGMR-SLQVAQWLQTQGFRRVFNVSGGIHAYATKVDPS 291 (295)
Q Consensus 242 -~~~~~~~iv~~C~~g~r-s~~a~~~L~~~G~~~v~~l~GG~~~W~~~~~p~ 291 (295)
.++++++|||||.+|.+ |..+++.|+.+||+||++|+||+.+|...+.|.
T Consensus 81 ~gi~~~~~ivvyc~~g~~~a~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~ 132 (280)
T 1urh_A 81 LGVNQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILGGGLAGWQRDDLLL 132 (280)
T ss_dssp TTCCTTSEEEEECSSSCSSHHHHHHHHHHTTCSCEEEETTHHHHHHHTTCCC
T ss_pred cCCCCCCeEEEECCCCCccHHHHHHHHHHcCCCCEEEecCCHHHHHHCCCcc
Confidence 25789999999999999 999999999999999999999999998877653
No 51
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.74 E-value=3.4e-18 Score=161.73 Aligned_cols=101 Identities=28% Similarity=0.410 Sum_probs=89.9
Q ss_pred hccccchhHHHhhhcCCCccccceEEeccChhhhhccCCCCceecCcccccCCCCCccccCCCCCcEEEEeCCChhHHHH
Q 022543 183 LLQDIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSWGPDITVKFDPQKDTYVMCHHGMRSLQV 262 (295)
Q Consensus 183 ~~~~is~~el~~~l~~~~~~~~~~liDvR~~~e~~~ghIpgAinip~~~l~~~~~~~~~~~~~~~~iv~~C~~g~rs~~a 262 (295)
....++.+++.+.+.+ .+.++||+|++.||..||||||+|+|+..+... +..++++++||+||++|.||..+
T Consensus 372 ~~~~i~~~~l~~~~~~----~~~~lvDvR~~~e~~~ghIpgA~~ip~~~l~~~----~~~l~~~~~vvv~C~~G~ra~~a 443 (474)
T 3tp9_A 372 SYANVSPDEVRGALAQ----QGLWLLDVRNVDEWAGGHLPQAHHIPLSKLAAH----IHDVPRDGSVCVYCRTGGRSAIA 443 (474)
T ss_dssp CCEEECHHHHHHTTTT----TCCEEEECSCHHHHHHCBCTTCEECCHHHHTTT----GGGSCSSSCEEEECSSSHHHHHH
T ss_pred cccccCHHHHHHHhcC----CCcEEEECCCHHHHhcCcCCCCEECCHHHHHHH----HhcCCCCCEEEEECCCCHHHHHH
Confidence 3456888899888865 467899999999999999999999999988654 34578999999999999999999
Q ss_pred HHHHHHcCCCCeEEecchHHHcccccCCC
Q 022543 263 AQWLQTQGFRRVFNVSGGIHAYATKVDPS 291 (295)
Q Consensus 263 ~~~L~~~G~~~v~~l~GG~~~W~~~~~p~ 291 (295)
+..|+.+||+||++|+|||.+|.+.+.|.
T Consensus 444 ~~~L~~~G~~~v~~~~Gg~~~W~~~g~p~ 472 (474)
T 3tp9_A 444 ASLLRAHGVGDVRNMVGGYEAWRGKGFPV 472 (474)
T ss_dssp HHHHHHHTCSSEEEETTHHHHHHHTTCCC
T ss_pred HHHHHHcCCCCEEEecChHHHHHhCCCCC
Confidence 99999999999999999999999887764
No 52
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=99.73 E-value=1.5e-18 Score=155.86 Aligned_cols=103 Identities=10% Similarity=0.088 Sum_probs=83.5
Q ss_pred cccchhHHHhhhcCCCccccceEEeccChhh-hhccCCCCceecCccc-ccCC----------CCCccc--cCCCCCcEE
Q 022543 185 QDIQPDELHKKMQDPNFHKEAQLIDVREPEE-VALSSLPGFQVLPLRQ-FGSW----------GPDITV--KFDPQKDTY 250 (295)
Q Consensus 185 ~~is~~el~~~l~~~~~~~~~~liDvR~~~e-~~~ghIpgAinip~~~-l~~~----------~~~~~~--~~~~~~~iv 250 (295)
..++++++.+++.+ .+.++||||++.| |..||||||+|+|+.. +... ....+. .++++++||
T Consensus 40 ~~is~~~l~~~l~~----~~~~iiDvR~~~e~y~~gHIpGAi~ip~~~~~~~~~~~~~~~~~~~~~~l~~lgi~~~~~vV 115 (318)
T 3hzu_A 40 RLVTADWLSAHMGA----PGLAIVESDEDVLLYDVGHIPGAVKIDWHTDLNDPRVRDYINGEQFAELMDRKGIARDDTVV 115 (318)
T ss_dssp GEECHHHHHHHTTC----TTEEEEECCSSTTSGGGCBCTTEEECCHHHHHBCSSSSSBCCHHHHHHHHHHTTCCTTCEEE
T ss_pred ceecHHHHHHhccC----CCEEEEECCCChhHHhcCcCCCCeEeCchhhhccCcccCCCCHHHHHHHHHHcCCCCCCeEE
Confidence 35888999998875 4689999999877 9999999999999742 1100 011111 267899999
Q ss_pred EEeCCCh-hHHHHHHHHHHcCCCCeEEecchHHHcccccCCC
Q 022543 251 VMCHHGM-RSLQVAQWLQTQGFRRVFNVSGGIHAYATKVDPS 291 (295)
Q Consensus 251 ~~C~~g~-rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~~~p~ 291 (295)
|||.+|. +|..+++.|+.+||+||++|+||+.+|..++.|.
T Consensus 116 vyc~~g~~~a~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~ 157 (318)
T 3hzu_A 116 IYGDKSNWWAAYALWVFTLFGHADVRLLNGGRDLWLAERRET 157 (318)
T ss_dssp EECSGGGHHHHHHHHHHHHTTCSCEEEETTHHHHHHHTTCCC
T ss_pred EECCCCCccHHHHHHHHHHcCCCceEEccCCHHHHhhcCCCc
Confidence 9999887 8999999999999999999999999999887664
No 53
>2ouc_A Dual specificity protein phosphatase 10; rhodanese fold, hydrolase; 2.20A {Homo sapiens}
Probab=99.73 E-value=9e-19 Score=138.58 Aligned_cols=103 Identities=21% Similarity=0.192 Sum_probs=73.6
Q ss_pred cchhHHHhhhcCC---C-ccccceEEeccChhhhhccCCCCceecCcccccCC--C--CCc-----cc---cCC-----C
Q 022543 187 IQPDELHKKMQDP---N-FHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSW--G--PDI-----TV---KFD-----P 245 (295)
Q Consensus 187 is~~el~~~l~~~---~-~~~~~~liDvR~~~e~~~ghIpgAinip~~~l~~~--~--~~~-----~~---~~~-----~ 245 (295)
++++++.+.+... . ...+.++||+|++.||..||||||+|+|+..+... . ... +. ... +
T Consensus 3 Is~~~l~~~l~~~~~~~l~~~~~~iiDvR~~~e~~~ghIpgA~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (142)
T 2ouc_A 3 IYPNDLAKKMTKCSKSHLPSQGPVIIDCRPFMEYNKSHIQGAVHINCADKISRRRLQQGKITVLDLISCREGKDSFKRIF 82 (142)
T ss_dssp ECHHHHHHHHHC----------CEEEECSCHHHHHHEEETTCEECCCSSHHHHHHHHTTSSCHHHHHHTTSCTTHHHHHH
T ss_pred cCHHHHHHHHHhcccccCCCCCCEEEEeCCHHHhhhhhccCccccCccHHHHHHHhhcCCcchhhhCCChhhhHHHhccC
Confidence 6677787733211 0 01467899999999999999999999999774210 0 110 00 000 2
Q ss_pred CCcEEEEeCCChhH---------HHHHHHHHHcCCCCeEEecchHHHcccccCC
Q 022543 246 QKDTYVMCHHGMRS---------LQVAQWLQTQGFRRVFNVSGGIHAYATKVDP 290 (295)
Q Consensus 246 ~~~iv~~C~~g~rs---------~~a~~~L~~~G~~~v~~l~GG~~~W~~~~~p 290 (295)
+++||+||.+|.++ ..++..|...|| +|++|+||+.+|...+.|
T Consensus 83 ~~~ivvyc~~g~~~~~~~~~~~~~~~~~~L~~~G~-~v~~l~GG~~~w~~~g~~ 135 (142)
T 2ouc_A 83 SKEIIVYDENTNEPSRVMPSQPLHIVLESLKREGK-EPLVLKGGLSSFKQNHEN 135 (142)
T ss_dssp HSCEEEECSSCCCGGGCCTTSHHHHHHHHHHHTTC-CCEEETTHHHHHTTTCGG
T ss_pred CCcEEEEECCCCchhhcCcccHHHHHHHHHHHcCC-cEEEEccCHHHHHHHCHH
Confidence 78999999999885 467888999999 999999999999877654
No 54
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=99.73 E-value=4.6e-18 Score=152.78 Aligned_cols=99 Identities=24% Similarity=0.288 Sum_probs=82.3
Q ss_pred ccchhHHHhhhcCCCccccceEEeccChhhhhc----------------cCCCCceecCcccccCCC---------CCcc
Q 022543 186 DIQPDELHKKMQDPNFHKEAQLIDVREPEEVAL----------------SSLPGFQVLPLRQFGSWG---------PDIT 240 (295)
Q Consensus 186 ~is~~el~~~l~~~~~~~~~~liDvR~~~e~~~----------------ghIpgAinip~~~l~~~~---------~~~~ 240 (295)
.++.+++.+.+.+ . ++||+|++.||.. ||||||+|||+..+.... ...+
T Consensus 180 ~i~~~el~~~l~~-----~-~liDvR~~~e~~~~~~~~~~~~~~~~~~~GhIpGA~niP~~~~~~~~g~~~~~~~l~~~~ 253 (318)
T 3hzu_A 180 RAFRDDVLAILGA-----Q-PLIDVRSPEEYTGKRTHMPDYPEEGALRAGHIPTAVHIPWGKAADESGRFRSREELERLY 253 (318)
T ss_dssp BCCHHHHHHHTTT-----S-CEEECSCHHHHHTSCSSCTTSCSCSCSSCSBCTTCEECCGGGGBCTTSCBCCHHHHHHHT
T ss_pred cccHHHHHHhhcC-----C-eEEecCCHHHhcccccCccccccccCCcCcCCCCeeecCHHHhcCCCCcCCCHHHHHHHh
Confidence 4778889888864 2 8999999999998 999999999997653311 1122
Q ss_pred ccCCCCCcEEEEeCCChhHHHHHHHHHH-cCCCCeEEecchHHHccc-ccCC
Q 022543 241 VKFDPQKDTYVMCHHGMRSLQVAQWLQT-QGFRRVFNVSGGIHAYAT-KVDP 290 (295)
Q Consensus 241 ~~~~~~~~iv~~C~~g~rs~~a~~~L~~-~G~~~v~~l~GG~~~W~~-~~~p 290 (295)
..++++++||+||++|.||..++..|++ +||+||++|+|||.+|.. .+.|
T Consensus 254 ~~l~~~~~ivvyC~sG~rs~~a~~~L~~~~G~~~v~~~~GG~~~W~~~~g~P 305 (318)
T 3hzu_A 254 DFINPDDQTVVYCRIGERSSHTWFVLTHLLGKADVRNYDGSWTEWGNAVRVP 305 (318)
T ss_dssp TTCCTTCCCEEECSSSHHHHHHHHHHHHTSCCSSCEECTTHHHHHTTSTTCC
T ss_pred cCCCCCCcEEEEcCChHHHHHHHHHHHHHcCCCCeeEeCCcHHHHhcCCCCC
Confidence 4578899999999999999999999997 999999999999999985 4544
No 55
>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A
Probab=99.72 E-value=7.8e-18 Score=144.39 Aligned_cols=95 Identities=31% Similarity=0.437 Sum_probs=80.1
Q ss_pred ccchhHHHhhhcCCCccccceEEeccChhhhhc----------cCCCCceecCcccccCCCCCccc--cCCCCCcEEEEe
Q 022543 186 DIQPDELHKKMQDPNFHKEAQLIDVREPEEVAL----------SSLPGFQVLPLRQFGSWGPDITV--KFDPQKDTYVMC 253 (295)
Q Consensus 186 ~is~~el~~~l~~~~~~~~~~liDvR~~~e~~~----------ghIpgAinip~~~l~~~~~~~~~--~~~~~~~iv~~C 253 (295)
.++.+++.+ +..+||+|++.||.. ||||||+|+|+..+.... +.+. .++++++||+||
T Consensus 122 ~i~~~e~~~---------~~~liDvR~~~e~~~~~~~~~~~~~ghIpgA~~ip~~~~~~~~-e~~~~~~~~~~~~iv~~C 191 (230)
T 2eg4_A 122 LLTADEAAR---------HPLLLDVRSPEEFQGKVHPPCCPRGGRIPGSKNAPLELFLSPE-GLLERLGLQPGQEVGVYC 191 (230)
T ss_dssp BCCHHHHHT---------CSCEEECSCHHHHTTSCCCTTSSSCCBCTTCEECCGGGGGCCT-THHHHHTCCTTCEEEEEC
T ss_pred eeCHHHHhh---------CCeEEeCCCHHHcCcccCCCCCccCCCCCCcEEcCHHHhCChH-HHHHhcCCCCCCCEEEEc
Confidence 466666655 257999999999999 999999999999886431 1222 468899999999
Q ss_pred CCChhHHHHHHHHHHcCCCCeEEecchHHHcccccCCC
Q 022543 254 HHGMRSLQVAQWLQTQGFRRVFNVSGGIHAYATKVDPS 291 (295)
Q Consensus 254 ~~g~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~~~p~ 291 (295)
++|.||..++..|+.+| .||++|+|||.+|...+.|.
T Consensus 192 ~~G~rs~~a~~~L~~~G-~~v~~~~Gg~~~W~~~g~p~ 228 (230)
T 2eg4_A 192 HSGARSAVAFFVLRSLG-VRARNYLGSMHEWLQEGLPT 228 (230)
T ss_dssp SSSHHHHHHHHHHHHTT-CEEEECSSHHHHHHHTTCCC
T ss_pred CChHHHHHHHHHHHHcC-CCcEEecCcHHHHhhcCCCC
Confidence 99999999999999999 89999999999999887764
No 56
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=99.72 E-value=1e-17 Score=148.04 Aligned_cols=103 Identities=21% Similarity=0.284 Sum_probs=84.0
Q ss_pred cccchhHHHhhhc---CCCccccceEEeccChhhhh----------------ccCCCCceecCcccccCCCC--------
Q 022543 185 QDIQPDELHKKMQ---DPNFHKEAQLIDVREPEEVA----------------LSSLPGFQVLPLRQFGSWGP-------- 237 (295)
Q Consensus 185 ~~is~~el~~~l~---~~~~~~~~~liDvR~~~e~~----------------~ghIpgAinip~~~l~~~~~-------- 237 (295)
..++.+++.+.+. .. +..+||+|++.||. .||||||+|+|+..+.....
T Consensus 146 ~~i~~~el~~~l~~~~~~----~~~liDvR~~~e~~g~~~~~~~~~~~~~~~~ghIpgA~~ip~~~~~~~~~~~~~~~~l 221 (285)
T 1uar_A 146 IRAYRDDVLEHIIKVKEG----KGALVDVRSPQEYRGELTHMPDYPQEGALRAGHIPGAKNIPWAKAVNPDGTFKSAEEL 221 (285)
T ss_dssp GEECHHHHHHHHHHHHTT----SEEEEECSCHHHHHTCC--------CCCSCCSBCTTCEECCGGGGBCTTSCBCCHHHH
T ss_pred eEEcHHHHHHHHhhcccC----CCcEEEcCCccceeeeccccccccccccccCCcCCCccccCHHHhcCCCCcCCCHHHH
Confidence 4588889988874 11 23699999999997 79999999999988753211
Q ss_pred -Ccccc--CCCCCcEEEEeCCChhHHHHHHHHH-HcCCCCeEEecchHHHcc-cccCCC
Q 022543 238 -DITVK--FDPQKDTYVMCHHGMRSLQVAQWLQ-TQGFRRVFNVSGGIHAYA-TKVDPS 291 (295)
Q Consensus 238 -~~~~~--~~~~~~iv~~C~~g~rs~~a~~~L~-~~G~~~v~~l~GG~~~W~-~~~~p~ 291 (295)
..+.. ++++++||+||++|.||..++..|+ .+||+||++|+|||.+|. ..+.|.
T Consensus 222 ~~~~~~~g~~~~~~ivvyC~~G~rs~~a~~~L~~~~G~~~v~~l~GG~~~W~~~~g~pv 280 (285)
T 1uar_A 222 RALYEPLGITKDKDIVVYCRIAERSSHSWFVLKYLLGYPHVKNYDGSWTEWGNLVGVPI 280 (285)
T ss_dssp HHHHGGGTCCTTSEEEEECSSHHHHHHHHHHHHTTSCCSCEEEESSHHHHHTTSTTCCC
T ss_pred HHHHHHcCCCCCCCEEEECCchHHHHHHHHHHHHHcCCCCcceeCchHHHHhcCCCCCc
Confidence 11222 6889999999999999999999999 899999999999999998 677664
No 57
>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A
Probab=99.71 E-value=2e-17 Score=145.71 Aligned_cols=99 Identities=27% Similarity=0.370 Sum_probs=80.6
Q ss_pred cchhHHHhhhcCCCccccceEEeccChhhhhc----------------cCCCCceecCcccccCCCC---------Cccc
Q 022543 187 IQPDELHKKMQDPNFHKEAQLIDVREPEEVAL----------------SSLPGFQVLPLRQFGSWGP---------DITV 241 (295)
Q Consensus 187 is~~el~~~l~~~~~~~~~~liDvR~~~e~~~----------------ghIpgAinip~~~l~~~~~---------~~~~ 241 (295)
++.+++.+.+.+ .. +||+|++.||.. ||||||+|+|+..+..... ..+.
T Consensus 146 ~~~~el~~~~~~----~~--liDvR~~~e~~~~~~~~~~~~~~~~~~~ghIpgA~~ip~~~~~~~~~~~~~~~~l~~~~~ 219 (277)
T 3aay_A 146 AFRDEVLAAINV----KN--LIDVRSPDEFSGKILAPAHLPQEQSQRPGHIPGAINVPWSRAANEDGTFKSDEELAKLYA 219 (277)
T ss_dssp ECHHHHHHTTTT----SE--EEECSCHHHHHTSCCC-----CCCCSCCSBCTTCEECCGGGGBCTTSCBCCHHHHHHHHH
T ss_pred cCHHHHHHhcCC----CC--EEEeCChHHeeeeecccccccccccccCCcCCCceecCHHHhcCCCCcCCCHHHHHHHHH
Confidence 567888887764 22 999999999986 9999999999986532111 1111
Q ss_pred --cCCCCCcEEEEeCCChhHHHHHHHHHH-cCCCCeEEecchHHHccc-ccCCC
Q 022543 242 --KFDPQKDTYVMCHHGMRSLQVAQWLQT-QGFRRVFNVSGGIHAYAT-KVDPS 291 (295)
Q Consensus 242 --~~~~~~~iv~~C~~g~rs~~a~~~L~~-~G~~~v~~l~GG~~~W~~-~~~p~ 291 (295)
.++++++||+||++|.||..++..|+. +||+||++|+|||.+|.. .+.|.
T Consensus 220 ~~~~~~~~~iv~yC~~G~rs~~a~~~L~~~~G~~~v~~l~GG~~~W~~~~g~pv 273 (277)
T 3aay_A 220 DAGLDNSKETIAYCRIGERSSHTWFVLRELLGHQNVKNYDGSWTEYGSLVGAPI 273 (277)
T ss_dssp HHTCCTTSCEEEECSSHHHHHHHHHHHHTTSCCSCEEEESSHHHHHTTSTTCCC
T ss_pred HcCCCCCCCEEEEcCcHHHHHHHHHHHHHHcCCCcceeeCchHHHHhcCCCCCC
Confidence 367899999999999999999999996 999999999999999988 66664
No 58
>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A
Probab=99.71 E-value=4.1e-18 Score=150.09 Aligned_cols=102 Identities=11% Similarity=0.098 Sum_probs=82.5
Q ss_pred ccchhHHHhhhcCCCccccceEEeccC-hhhhhccCCCCceecCcccccCCC-----------CCccc--cCCCCCcEEE
Q 022543 186 DIQPDELHKKMQDPNFHKEAQLIDVRE-PEEVALSSLPGFQVLPLRQFGSWG-----------PDITV--KFDPQKDTYV 251 (295)
Q Consensus 186 ~is~~el~~~l~~~~~~~~~~liDvR~-~~e~~~ghIpgAinip~~~l~~~~-----------~~~~~--~~~~~~~iv~ 251 (295)
.++++++.+++.+ .+.++||||+ +.||..||||||+|+|+..+.... ...+. .++++++|||
T Consensus 7 ~is~~~l~~~l~~----~~~~liDvR~~~~ey~~ghIpgA~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~vvv 82 (277)
T 3aay_A 7 LVSADWAESNLHA----PKVVFVEVDEDTSAYDRDHIAGAIKLDWRTDLQDPVKRDFVDAQQFSKLLSERGIANEDTVIL 82 (277)
T ss_dssp EECHHHHHTTTTC----TTEEEEEEESSSHHHHHCBSTTCEEEETTTTTBCSSSSSBCCHHHHHHHHHHHTCCTTSEEEE
T ss_pred eEcHHHHHHHhCC----CCEEEEEcCCChhhHhhCCCCCcEEecccccccCCCCCCCCCHHHHHHHHHHcCCCCCCeEEE
Confidence 4788899888865 4578999998 899999999999999987532110 01111 2678999999
Q ss_pred EeCCCh-hHHHHHHHHHHcCCCCeEEecchHHHcccccCCC
Q 022543 252 MCHHGM-RSLQVAQWLQTQGFRRVFNVSGGIHAYATKVDPS 291 (295)
Q Consensus 252 ~C~~g~-rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~~~p~ 291 (295)
||.+|. +|..+++.|+.+||++|++|+||+.+|...+.|.
T Consensus 83 yc~~g~~~s~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~ 123 (277)
T 3aay_A 83 YGGNNNWFAAYAYWYFKLYGHEKVKLLDGGRKKWELDGRPL 123 (277)
T ss_dssp ECSGGGHHHHHHHHHHHHTTCCSEEEETTHHHHHHHTTCCC
T ss_pred ECCCCCchHHHHHHHHHHcCCCcEEEecCCHHHHHHcCCcc
Confidence 999875 6889999999999999999999999998877653
No 59
>3f4a_A Uncharacterized protein YGR203W; protein phosphatase, rhodanese-like family, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.80A {Saccharomyces cerevisiae} PDB: 3fs5_A*
Probab=99.71 E-value=4.2e-19 Score=145.12 Aligned_cols=108 Identities=16% Similarity=0.221 Sum_probs=80.8
Q ss_pred hhccccchhHHHhhhcCCC---ccccceEEeccChhhhhccCCCCceecCcccccCC---CCCccccC-------CCCCc
Q 022543 182 SLLQDIQPDELHKKMQDPN---FHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSW---GPDITVKF-------DPQKD 248 (295)
Q Consensus 182 ~~~~~is~~el~~~l~~~~---~~~~~~liDvR~~~e~~~ghIpgAinip~~~l~~~---~~~~~~~~-------~~~~~ 248 (295)
.....|+++++.+++.+.. ...+.+|||||+ .||..||||||+|||+..+... ...+...+ ..+++
T Consensus 28 ~~~~~Is~~eL~~~l~~~~~~~~~~~~~iIDVR~-~Ey~~GHIpGAiniP~~~l~~~~~~l~~l~~~~~~~~~~~~~~~~ 106 (169)
T 3f4a_A 28 TNVKYLDPTELHRWMQEGHTTTLREPFQVVDVRG-SDYMGGHIKDGWHYAYSRLKQDPEYLRELKHRLLEKQADGRGALN 106 (169)
T ss_dssp CSEEEECHHHHHHHHHHTSCTTTCCCEEEEECCS-TTCTTCEETTCEECCHHHHHHCHHHHHHHHHHHHHHHHTSSSCEE
T ss_pred CCCcEeCHHHHHHHHhcCCccCcCCCEEEEECCc-hHHccCcCCCCEECCHHHhhcccccHHHHHHHHHhhcccccCCCe
Confidence 3456789999999987531 012479999999 8999999999999999887543 22222111 11479
Q ss_pred EEEEeCCC-hhHHHHHHHHHH----cC--CCCeEEecchHHHcccccCC
Q 022543 249 TYVMCHHG-MRSLQVAQWLQT----QG--FRRVFNVSGGIHAYATKVDP 290 (295)
Q Consensus 249 iv~~C~~g-~rs~~a~~~L~~----~G--~~~v~~l~GG~~~W~~~~~p 290 (295)
|||||.+| .|+..++.+|.. .| +.+|++|+||+.+|...+.|
T Consensus 107 IVvyC~sG~~Rs~~aa~~l~~~L~~~G~~~~~V~~L~GG~~aW~~~~~~ 155 (169)
T 3f4a_A 107 VIFHCMLSQQRGPSAAMLLLRSLDTAELSRCRLWVLRGGFSRWQSVYGD 155 (169)
T ss_dssp EEEECSSSSSHHHHHHHHHHHTCCHHHHTTEEEEEETTHHHHHHHHHTT
T ss_pred EEEEeCCCCCcHHHHHHHHHHHHHHcCCCCCCEEEECCCHHHHHHHcCC
Confidence 99999987 899888877754 36 57899999999999987654
No 60
>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A
Probab=99.71 E-value=3.2e-17 Score=145.85 Aligned_cols=107 Identities=13% Similarity=0.181 Sum_probs=84.8
Q ss_pred cccchhHHHhhhcCCCccccceEEecc--------ChhhhhccCCCCceecCcccccCCCC---Cc----------c--c
Q 022543 185 QDIQPDELHKKMQDPNFHKEAQLIDVR--------EPEEVALSSLPGFQVLPLRQFGSWGP---DI----------T--V 241 (295)
Q Consensus 185 ~~is~~el~~~l~~~~~~~~~~liDvR--------~~~e~~~ghIpgAinip~~~l~~~~~---~~----------~--~ 241 (295)
..++++++.+++.+.....+.++|||| ++.+|..||||||+|+|+..+..... .. + .
T Consensus 8 ~~is~~~l~~~l~~~~~~~~~~liDvR~~~~~~~~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~l~~l 87 (296)
T 1rhs_A 8 ALVSTKWLAESVRAGKVGPGLRVLDASWYSPGTREARKEYLERHVPGASFFDIEECRDKASPYEVMLPSEAGFADYVGSL 87 (296)
T ss_dssp SEECHHHHHHHHHTTCCBTTEEEEECCCCCTTSCCHHHHHHHSBCTTCEECCTTTSSCTTSSSSSCCCCHHHHHHHHHHT
T ss_pred ceeeHHHHHHHHhccccCCCeEEEEecccCcCCcchhhhHhhCcCCCCEEeCHHHhcCCCCCCCCCCCCHHHHHHHHHHc
Confidence 357888999888651101357899999 68999999999999999987754321 00 1 1
Q ss_pred cCCCCCcEEEEeCC--Chh-HHHHHHHHHHcCCCCeEEecchHHHcccccCCC
Q 022543 242 KFDPQKDTYVMCHH--GMR-SLQVAQWLQTQGFRRVFNVSGGIHAYATKVDPS 291 (295)
Q Consensus 242 ~~~~~~~iv~~C~~--g~r-s~~a~~~L~~~G~~~v~~l~GG~~~W~~~~~p~ 291 (295)
.++++++|||||.+ |.+ +..+++.|+.+||++|++|+||+.+|...+.|.
T Consensus 88 gi~~~~~vVvyc~~~~g~~~a~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~ 140 (296)
T 1rhs_A 88 GISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLNGGFRNWLKEGHPV 140 (296)
T ss_dssp TCCTTCEEEEECCCSSSCSSHHHHHHHHHHTTCCCEEEETTHHHHHHHTTCCC
T ss_pred CCCCCCeEEEEcCCCCCcchHHHHHHHHHHcCCCcEEEcCCCHHHHHHcCCcc
Confidence 25788999999998 877 789999999999999999999999999887653
No 61
>3tg1_B Dual specificity protein phosphatase 10; kinase/rhodanese-like domain, docking interaction, transfera hydrolase complex; 2.71A {Homo sapiens}
Probab=99.70 E-value=3.5e-17 Score=132.28 Aligned_cols=104 Identities=19% Similarity=0.156 Sum_probs=77.5
Q ss_pred hccccchhHHHhhhcCCCc----cccceEEeccChhhhhccCCCCceecCccccc------C-CCC--------CccccC
Q 022543 183 LLQDIQPDELHKKMQDPNF----HKEAQLIDVREPEEVALSSLPGFQVLPLRQFG------S-WGP--------DITVKF 243 (295)
Q Consensus 183 ~~~~is~~el~~~l~~~~~----~~~~~liDvR~~~e~~~ghIpgAinip~~~l~------~-~~~--------~~~~~~ 243 (295)
....++++++.+++..... ..+.++||+|++.||..||||||+|+|+..+. . ... .....+
T Consensus 9 ~~~~is~~el~~~l~~~~~~~~~~~~~~liDvR~~~e~~~ghI~ga~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (158)
T 3tg1_B 9 SIKIIYPNDLAKKMTKCSKSHLPSQGPVIIDCRPFMEYNKSHIQGAVHINCADKISRRRLQQGKITVLDLISCREGKDSF 88 (158)
T ss_dssp --CEECHHHHHHHHCC----------CEEEECSCHHHHHHCCBTTCEECCCSSHHHHHHHTTSSCCHHHHTCCCCSSCSS
T ss_pred CCcEecHHHHHHHHHhcccccCCCCCEEEEEcCCHHHHHhCCCCCceeechhHHHHHhhhhcCcccHHhhcCCHHHHHHH
Confidence 3456888999998873100 14578999999999999999999999998752 1 110 000111
Q ss_pred --CCCCcEEEEeCCC---------hhHHHHHHHHHHcCCCCeEEecchHHHcccc
Q 022543 244 --DPQKDTYVMCHHG---------MRSLQVAQWLQTQGFRRVFNVSGGIHAYATK 287 (295)
Q Consensus 244 --~~~~~iv~~C~~g---------~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~ 287 (295)
.++++|||||.+| .+|..++..|+..|| +|++|+|||.+|...
T Consensus 89 ~~~~~~~IVvyc~~g~~~~~~~~~~~s~~a~~~L~~~G~-~v~~L~GG~~~W~~~ 142 (158)
T 3tg1_B 89 KRIFSKEIIVYDENTNEPSRVMPSQPLHIVLESLKREGK-EPLVLKGGLSSFKQN 142 (158)
T ss_dssp TTTTTSCEEEECSCCSCTTSCCSSSHHHHHHHHHHTTTC-CEEEETTHHHHHTSS
T ss_pred hccCCCeEEEEECCCCcccccCcchHHHHHHHHHHhCCC-cEEEeCCcHHHHHHH
Confidence 2478999999999 468999999999999 699999999999764
No 62
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=99.70 E-value=3.3e-18 Score=151.24 Aligned_cols=103 Identities=11% Similarity=0.125 Sum_probs=83.1
Q ss_pred cccchhHHHhhhcCCCccccceEEecc-ChhhhhccCCCCceecCcccccC-C----------CCCccc--cCCCCCcEE
Q 022543 185 QDIQPDELHKKMQDPNFHKEAQLIDVR-EPEEVALSSLPGFQVLPLRQFGS-W----------GPDITV--KFDPQKDTY 250 (295)
Q Consensus 185 ~~is~~el~~~l~~~~~~~~~~liDvR-~~~e~~~ghIpgAinip~~~l~~-~----------~~~~~~--~~~~~~~iv 250 (295)
..++++++.+++.+ .+.++|||| ++.+|..||||||+|+|+..+.. . ....+. .++++++||
T Consensus 8 ~~is~~~l~~~l~~----~~~~liDvR~~~~e~~~ghIpgA~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~iv 83 (285)
T 1uar_A 8 VLVSTDWVQEHLED----PKVRVLEVDEDILLYDTGHIPGAQKIDWQRDFWDPVVRDFISEEEFAKLMERLGISNDTTVV 83 (285)
T ss_dssp GEECHHHHHTTTTC----TTEEEEEECSSTTHHHHCBCTTCEEECHHHHHBCSSSSSBCCHHHHHHHHHHTTCCTTCEEE
T ss_pred ceEcHHHHHHhcCC----CCEEEEEcCCCcchhhcCcCCCCEECCchhhccCCcccCCCCHHHHHHHHHHcCCCCCCeEE
Confidence 35888999888865 467899999 78999999999999999874211 0 011112 257899999
Q ss_pred EEeCCCh-hHHHHHHHHHHcCCCCeEEecchHHHcccccCCC
Q 022543 251 VMCHHGM-RSLQVAQWLQTQGFRRVFNVSGGIHAYATKVDPS 291 (295)
Q Consensus 251 ~~C~~g~-rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~~~p~ 291 (295)
|||.+|. +|..+++.|+.+||+||++|+||+.+|...+.|.
T Consensus 84 vyc~~g~~~s~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~ 125 (285)
T 1uar_A 84 LYGDKNNWWAAYAFWFFKYNGHKDVRLMNGGRQKWVEEGRPL 125 (285)
T ss_dssp EECHHHHHHHHHHHHHHHHTTCSCEEEETTHHHHHHHHTCCC
T ss_pred EECCCCCccHHHHHHHHHHcCCCCeEEecCCHHHHHHCCCcc
Confidence 9999988 7999999999999999999999999998877653
No 63
>3nrk_A LIC12922; NC domain, parvulin domain, SURA homology, probable chaperon unknown function; 3.10A {Leptospira interrogans serovar copenhaorganism_taxid}
Probab=99.70 E-value=5.8e-18 Score=152.58 Aligned_cols=109 Identities=16% Similarity=0.216 Sum_probs=92.2
Q ss_pred Cchhhhccc-cCCCCCCCCCCCceEEEeeEEe-cc--------chHHHHHHHHHH-hCCCCcHHHHHHHhCCCC-CccCC
Q 022543 67 TSPKAASFS-SGTEGSSPGGGDREILVQHLLV-KE--------DDLNLLSELQRR-VSQGKDLSDLAVEHSICP-SKGEG 134 (295)
Q Consensus 67 ~~~e~~~y~-~~~~~~~~~~~~~~~~~~~Il~-~~--------~~~~~a~~i~~~-i~~g~~F~~~a~~~S~d~-~~~~g 134 (295)
++.+...|. .+.. .-+.+++++||+| +. +++++|++++++ |++|++|+++|++||+|+ ++.+|
T Consensus 141 td~ei~~yy~~~~~-----~~~~~~~~~~Ili~~~~~~~~~~~~~~~~a~~i~~~~l~~g~~F~~lA~~~S~d~~s~~~g 215 (325)
T 3nrk_A 141 NEQEIRSWYNQNKD-----KVGFEIRYRIISIAPENDSIQEENRLYKEVSEIRKSILADPSSFALIAGSPRNDPALRARR 215 (325)
T ss_dssp CHHHHHHHHHHCHH-----HHCEEEEEEEEEECCSSSCHHHHHHHHHHHHHHHHHHHHCTTHHHHHHHSTTSCHHHHHTT
T ss_pred CHHHHHHHHHHhhh-----hcCcceEEEEEEEecCCCCccchHHHHHHHHHHHHHHHhCCCCHHHHHHHhCCCccccccC
Confidence 555554443 4432 2356899999999 32 456779999999 999999999999999999 67999
Q ss_pred CcccceeCCCCc---HHHHHHHhcCCCCcee-eeeecC-ceeeeehhhhhh
Q 022543 135 GMLGWVRKGQLV---PEFEEVAFTTPLNKVA-RCKTKF-GWHLLQVLSERE 180 (295)
Q Consensus 135 G~lg~~~~~~~~---~~~~~~~~~l~~g~is-pv~~~~-G~~ii~v~~~~~ 180 (295)
|+|||+..+.++ |+|..++++|++|++| ||++++ ||||+++.++++
T Consensus 216 G~lg~~~~~~l~~~~~~~~~a~~~l~~Geis~pv~t~~~G~hIikv~~~~~ 266 (325)
T 3nrk_A 216 GMVEWISSFDLYKYSKITATIAAPLPNGGVSEVFRDERKRYCILKIEGKRP 266 (325)
T ss_dssp TEEEEEEHHHHHHHCHHHHHHHTTCCTTCBCCCEECTTSCEEEEEEEEEEE
T ss_pred CcccccccccccccCHHHHHHHHcCCCCCCCceEEeCCCeEEEEEEeccCC
Confidence 999999999999 9999999999999999 999999 999999988753
No 64
>1hzm_A Dual specificity protein phosphatase 6; hydrolase; NMR {Homo sapiens} SCOP: c.46.1.1
Probab=99.70 E-value=3.6e-18 Score=137.36 Aligned_cols=101 Identities=12% Similarity=0.087 Sum_probs=75.3
Q ss_pred ccccchhHHHhhhcCCCccccceEEeccChhhhhccCCCCceecCccccc------C--CCCCc---------cccCCCC
Q 022543 184 LQDIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFG------S--WGPDI---------TVKFDPQ 246 (295)
Q Consensus 184 ~~~is~~el~~~l~~~~~~~~~~liDvR~~~e~~~ghIpgAinip~~~l~------~--~~~~~---------~~~~~~~ 246 (295)
...++++++.+++.+. ..+.++||||++.||..||||||+|||+..+. . ..... +..++++
T Consensus 15 ~~~is~~~l~~~l~~~--~~~~~liDvR~~~ey~~gHIpgAinip~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 92 (154)
T 1hzm_A 15 AISKTVAWLNEQLELG--NERLLLMDCRPQELYESSHIESAINVAIPGIMLRRLQKGNLPVRALFTRGEDRDRFTRRCGT 92 (154)
T ss_dssp SSBSCCCCHHHHHHHC--SSSCEEECCSTTHHHHHHTSSSCCCCCCSSHHHHTBCCSCCCTTTTSTTSHHHHHHHHSTTS
T ss_pred ccccCHHHHHHHHhCC--CCCEEEEEcCCHHHHhhccccCceEeCccHHHHhhhhcCcccHHHhCCCHHHHHHHhccCCC
Confidence 3457788888887642 02678999999999999999999999997642 1 00011 1224678
Q ss_pred CcEEEEeCCChhH-------HHHHHHHHHc---CCCCeEEecchHHHcccc
Q 022543 247 KDTYVMCHHGMRS-------LQVAQWLQTQ---GFRRVFNVSGGIHAYATK 287 (295)
Q Consensus 247 ~~iv~~C~~g~rs-------~~a~~~L~~~---G~~~v~~l~GG~~~W~~~ 287 (295)
++||+||.+|.++ ..+++.|+.+ ||+ |++|+||+.+|...
T Consensus 93 ~~iVvyc~~g~~~~~~~~aa~~~~~~l~~l~~~G~~-v~~L~GG~~~W~~~ 142 (154)
T 1hzm_A 93 DTVVLYDESSSDWNENTGGESLLGLLLKKLKDEGCR-AFYLEGGFSKFQAE 142 (154)
T ss_dssp SCEEECCCSSSSSCSCSSCCSHHHHHHHHHHHTTCC-CEECCCCHHHHHHH
T ss_pred CeEEEEeCCCCccccccccchHHHHHHHHHHHCCCc-eEEEcChHHHHHHH
Confidence 9999999998875 3446666655 998 99999999999764
No 65
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}
Probab=99.69 E-value=3.1e-17 Score=147.23 Aligned_cols=105 Identities=20% Similarity=0.316 Sum_probs=84.4
Q ss_pred cchhHHHhhhcCCCccccceEEeccChhhhh-----------ccCCCCceecCcccccCCCCCc----------------
Q 022543 187 IQPDELHKKMQDPNFHKEAQLIDVREPEEVA-----------LSSLPGFQVLPLRQFGSWGPDI---------------- 239 (295)
Q Consensus 187 is~~el~~~l~~~~~~~~~~liDvR~~~e~~-----------~ghIpgAinip~~~l~~~~~~~---------------- 239 (295)
++.+++.+.+.+.....+.++||+|.+.+|. .||||||+|+|+..+.......
T Consensus 186 ~~~~~v~~~v~~~~~~~~~~lvDaRs~~rf~G~~~ep~~~~r~GHIPGA~nlP~~~~ld~~~~~~~~~~e~l~~~l~~~~ 265 (327)
T 3utn_X 186 VDYEEMFQLVKSGELAKKFNAFDARSLGRFEGTEPEPRSDIPSGHIPGTQPLPYGSLLDPETKTYPEAGEAIHATLEKAL 265 (327)
T ss_dssp ECHHHHHHHHHTTCHHHHCEEEECSCHHHHHTSSCCSSSSCCCCBCTTEEECCGGGGSCTTTCCCCCTTHHHHHHHHHHH
T ss_pred ecHHHHhhhhhcccccccceeeccCccceecccccCccccccCCCCCCCcccChhhccCCCCCCCCCcHHHHHHHHHHHH
Confidence 5667777777654322457899999999996 3999999999998875422111
Q ss_pred ---cccCCCCCcEEEEeCCChhHHHHHHHHHHcCCCCeEEecchHHHcccccCCC
Q 022543 240 ---TVKFDPQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIHAYATKVDPS 291 (295)
Q Consensus 240 ---~~~~~~~~~iv~~C~~g~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~~~p~ 291 (295)
...++++++||+||++|.+|+..+..|..+||++|++|+|+|.+|....+|.
T Consensus 266 ~~~~~gid~~k~vI~yCgsGvtA~~~~laL~~lG~~~v~lYdGSWsEW~~r~~pe 320 (327)
T 3utn_X 266 KDFHCTLDPSKPTICSCGTGVSGVIIKTALELAGVPNVRLYDGSWTEWVLKSGPE 320 (327)
T ss_dssp HHTTCCCCTTSCEEEECSSSHHHHHHHHHHHHTTCCSEEEESSHHHHHHHHHCGG
T ss_pred HHhhcCCCCCCCEEEECChHHHHHHHHHHHHHcCCCCceeCCCcHHHhccccCCc
Confidence 1246789999999999999999999999999999999999999999877664
No 66
>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2
Probab=99.69 E-value=1.5e-17 Score=159.56 Aligned_cols=103 Identities=17% Similarity=0.111 Sum_probs=87.9
Q ss_pred ccccchhHHHhhhcCCCccccceEEeccChhhhhccCCCCceecCcccccCCCCCccccCCCCCcEEEEeCCChhHHHHH
Q 022543 184 LQDIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSWGPDITVKFDPQKDTYVMCHHGMRSLQVA 263 (295)
Q Consensus 184 ~~~is~~el~~~l~~~~~~~~~~liDvR~~~e~~~ghIpgAinip~~~l~~~~~~~~~~~~~~~~iv~~C~~g~rs~~a~ 263 (295)
...++++++.+.+.+. .+..+||||++.||..||||||+|||+..|..+...+ ..+++++|||||.+|.+|..++
T Consensus 6 ~~~is~~~l~~~l~~~---~~~~liDvR~~~e~~~ghIpgAv~ip~~~~~~~~~~l--~~~~~~~iVvyc~~g~~s~~a~ 80 (539)
T 1yt8_A 6 IAVRTFHDIRAALLAR---RELALLDVREEDPFAQAHPLFAANLPLSRLELEIHAR--VPRRDTPITVYDDGEGLAPVAA 80 (539)
T ss_dssp CEEECHHHHHHHHHHT---CCBEEEECSCHHHHTTSBCTTCEECCGGGHHHHHHHH--SCCTTSCEEEECSSSSHHHHHH
T ss_pred CcccCHHHHHHHHhCC---CCeEEEECCCHHHHhcCcCCCCEECCHHHHHHHHHhh--CCCCCCeEEEEECCCChHHHHH
Confidence 4468889999988643 4689999999999999999999999998876432222 1247899999999999999999
Q ss_pred HHHHHcCCCCeEEecchHHHcccccCCC
Q 022543 264 QWLQTQGFRRVFNVSGGIHAYATKVDPS 291 (295)
Q Consensus 264 ~~L~~~G~~~v~~l~GG~~~W~~~~~p~ 291 (295)
+.|+.+||+||++|+||+.+|...+.|.
T Consensus 81 ~~L~~~G~~~V~~L~GG~~~W~~~g~p~ 108 (539)
T 1yt8_A 81 QRLHDLGYSDVALLDGGLSGWRNAGGEL 108 (539)
T ss_dssp HHHHHTTCSSEEEETTHHHHHHHTTCCC
T ss_pred HHHHHcCCCceEEeCCCHHHHHhcCCCc
Confidence 9999999999999999999999988775
No 67
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.68 E-value=3.2e-17 Score=158.86 Aligned_cols=100 Identities=30% Similarity=0.541 Sum_probs=87.2
Q ss_pred hhccccchhHHHhhhcCCCccccceEEeccChhhhhccCCCCceecCcccccCCCCCccccCCCCCcEEEEeCCChhHHH
Q 022543 182 SLLQDIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSWGPDITVKFDPQKDTYVMCHHGMRSLQ 261 (295)
Q Consensus 182 ~~~~~is~~el~~~l~~~~~~~~~~liDvR~~~e~~~ghIpgAinip~~~l~~~~~~~~~~~~~~~~iv~~C~~g~rs~~ 261 (295)
.....++++++.+++.+ +..+||||++.||..||||||+|+|+..+... +..++++++||+||.+|.||..
T Consensus 486 ~~~~~i~~~~~~~~~~~-----~~~~iDvR~~~e~~~ghi~ga~~ip~~~l~~~----~~~l~~~~~iv~~C~~g~rs~~ 556 (588)
T 3ics_A 486 GFVDTVQWHEIDRIVEN-----GGYLIDVREPNELKQGMIKGSINIPLDELRDR----LEEVPVDKDIYITCQLGMRGYV 556 (588)
T ss_dssp TSCCEECTTTHHHHHHT-----TCEEEECSCGGGGGGCBCTTEEECCHHHHTTC----GGGSCSSSCEEEECSSSHHHHH
T ss_pred cccceecHHHHHHHhcC-----CCEEEEcCCHHHHhcCCCCCCEECCHHHHHHH----HhhCCCCCeEEEECCCCcHHHH
Confidence 44567888999888853 47899999999999999999999999988654 4457899999999999999999
Q ss_pred HHHHHHHcCCCCeEEecchHHHcccccCCC
Q 022543 262 VAQWLQTQGFRRVFNVSGGIHAYATKVDPS 291 (295)
Q Consensus 262 a~~~L~~~G~~~v~~l~GG~~~W~~~~~p~ 291 (295)
+++.|+..||+ |++|+||+.+|.....+.
T Consensus 557 a~~~l~~~G~~-v~~l~GG~~~w~~~~~~~ 585 (588)
T 3ics_A 557 AARMLMEKGYK-VKNVDGGFKLYGTVLPER 585 (588)
T ss_dssp HHHHHHHTTCC-EEEETTHHHHHHHHCGGG
T ss_pred HHHHHHHcCCc-EEEEcchHHHHHhhhhhh
Confidence 99999999998 999999999998765443
No 68
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=99.68 E-value=4.9e-17 Score=156.70 Aligned_cols=94 Identities=22% Similarity=0.388 Sum_probs=81.8
Q ss_pred hccccchhHHHhhhcCCCccccceEEeccChhhhhccCCCCceecCcccccCCCCCccccCCCCCcEEEEeCCChhHHHH
Q 022543 183 LLQDIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSWGPDITVKFDPQKDTYVMCHHGMRSLQV 262 (295)
Q Consensus 183 ~~~~is~~el~~~l~~~~~~~~~~liDvR~~~e~~~ghIpgAinip~~~l~~~~~~~~~~~~~~~~iv~~C~~g~rs~~a 262 (295)
....++++++.++ . ++..+||||++.||..||||||+|+|++.+... +..++++++||+||++|.||..+
T Consensus 471 ~~~~i~~~~~~~~--~----~~~~~iDvR~~~e~~~~~i~ga~~ip~~~l~~~----~~~~~~~~~iv~~c~~g~rs~~a 540 (565)
T 3ntd_A 471 DATPIHFDQIDNL--S----EDQLLLDVRNPGELQNGGLEGAVNIPVDELRDR----MHELPKDKEIIIFSQVGLRGNVA 540 (565)
T ss_dssp SCCEECTTTTTSC--C----TTEEEEECSCGGGGGGCCCTTCEECCGGGTTTS----GGGSCTTSEEEEECSSSHHHHHH
T ss_pred ccceeeHHHHHhC--C----CCcEEEEeCCHHHHhcCCCCCcEECCHHHHHHH----HhhcCCcCeEEEEeCCchHHHHH
Confidence 3455777777655 2 568999999999999999999999999988654 45578999999999999999999
Q ss_pred HHHHHHcCCCCeEEecchHHHcccc
Q 022543 263 AQWLQTQGFRRVFNVSGGIHAYATK 287 (295)
Q Consensus 263 ~~~L~~~G~~~v~~l~GG~~~W~~~ 287 (295)
++.|+..|| ||++|+||+.+|...
T Consensus 541 ~~~l~~~G~-~v~~l~gG~~~w~~~ 564 (565)
T 3ntd_A 541 YRQLVNNGY-RARNLIGGYRTYKFA 564 (565)
T ss_dssp HHHHHHTTC-CEEEETTHHHHHHHT
T ss_pred HHHHHHcCC-CEEEEcChHHHHHhC
Confidence 999999999 999999999999765
No 69
>1m5y_A SurviVal protein, surviVal protein SURA; surviVal protein A, periplasmic molecular chaperone, membrane protein folding, GRAM negative bacteria; 3.00A {Escherichia coli} SCOP: a.223.1.2 d.26.1.1 d.26.1.1 PDB: 2pv3_A
Probab=99.68 E-value=1.1e-17 Score=155.08 Aligned_cols=113 Identities=19% Similarity=0.313 Sum_probs=92.5
Q ss_pred ccCchhhh-ccccCCCCCCCCCCCceEEEeeEEeccc----------hHHHHHHHHHHhCCCCcHHHHHHHhCCCCCccC
Q 022543 65 SFTSPKAA-SFSSGTEGSSPGGGDREILVQHLLVKED----------DLNLLSELQRRVSQGKDLSDLAVEHSICPSKGE 133 (295)
Q Consensus 65 ~~~~~e~~-~y~~~~~~~~~~~~~~~~~~~~Il~~~~----------~~~~a~~i~~~i~~g~~F~~~a~~~S~d~~~~~ 133 (295)
.+++.+.. +|..+.. ....+++++++||+++.. ++++|++++++|++|++|+++|++||+|+++.+
T Consensus 131 ~vsd~ei~~~y~~~~~---~~~~~~~~~~~~i~i~~~~~~s~~~~~~~~~~a~~~~~~l~~g~~F~~lA~~~S~~~~~~~ 207 (408)
T 1m5y_A 131 TILPQEVESLAQQVGN---QNDASTELNLSHILIPLPENPTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALN 207 (408)
T ss_dssp CCCTTHHHHHHHCC----------CCEEEEEEEEECCSSCCHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHCCSTTGGG
T ss_pred CCCHHHHHHHHHhhhh---hcCCcccEEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHcCCCccccc
Confidence 34555553 3444331 235678999999999743 356799999999999999999999999999999
Q ss_pred CCcccceeCCCCcHHHHHHHhcCCCCcee-eeeecCceeeeehhhhhh
Q 022543 134 GGMLGWVRKGQLVPEFEEVAFTTPLNKVA-RCKTKFGWHLLQVLSERE 180 (295)
Q Consensus 134 gG~lg~~~~~~~~~~~~~~~~~l~~g~is-pv~~~~G~~ii~v~~~~~ 180 (295)
||++||+..+.++++|..+++.|++|++| |+++++||||+++.+.++
T Consensus 208 gG~lg~~~~~~l~~~~~~~~~~l~~G~vs~pv~~~~g~~iikv~~~~~ 255 (408)
T 1m5y_A 208 GGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRG 255 (408)
T ss_dssp TTEEEEECGGGSCHHHHTGGGTCCTTCEEEEEEETTEEEEEEEEEECC
T ss_pred CCcccccchhhccHHHHHHHHhCCCCCccCeeecCCeEEEEEEEEecC
Confidence 99999999999999999999999999999 999999999999988654
No 70
>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}
Probab=99.67 E-value=1.3e-16 Score=142.36 Aligned_cols=107 Identities=13% Similarity=0.175 Sum_probs=82.9
Q ss_pred cccchhHHHhhhcCCCccccceEEecc---------ChhhhhccCCCCceecCcccccCCCC-------------Cccc-
Q 022543 185 QDIQPDELHKKMQDPNFHKEAQLIDVR---------EPEEVALSSLPGFQVLPLRQFGSWGP-------------DITV- 241 (295)
Q Consensus 185 ~~is~~el~~~l~~~~~~~~~~liDvR---------~~~e~~~ghIpgAinip~~~l~~~~~-------------~~~~- 241 (295)
..++++++.+.+.+.....+.++|||| ++.||..||||||+|||+..+..... ..+.
T Consensus 22 ~lIs~~~l~~~l~~~~~~~~~~ilDvR~~~~~~~~~~~~ey~~gHIpGAi~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~ 101 (302)
T 3olh_A 22 SMVSAQWVAEALRAPRAGQPLQLLDASWYLPKLGRDARREFEERHIPGAAFFDIDQCSDRTSPYDHMLPGAEHFAEYAGR 101 (302)
T ss_dssp CEECHHHHHHHHHCCCSSCCEEEEECCCCCCC--CCHHHHHHHSCCTTCEECCTTTSSCSSCSSSSCCCCHHHHHHHHHH
T ss_pred CccCHHHHHHHhcCcCCCCCEEEEEeecCCCccCcccHHHHhhCcCCCCeEeCHHHhcCcCCCCCCCCCCHHHHHHHHHH
Confidence 347889999988752111368999999 78999999999999999876532110 0111
Q ss_pred -cCCCCCcEEEEeCC---ChhHHHHHHHHHHcCCCCeEEecchHHHcccccCCC
Q 022543 242 -KFDPQKDTYVMCHH---GMRSLQVAQWLQTQGFRRVFNVSGGIHAYATKVDPS 291 (295)
Q Consensus 242 -~~~~~~~iv~~C~~---g~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~~~p~ 291 (295)
.++++++|||||++ +.+|.++++.|+.+||++|++|+||+.+|..++.|.
T Consensus 102 lgi~~~~~VVvyc~~~~g~~~a~ra~~~L~~~G~~~V~~L~GG~~~W~~~g~p~ 155 (302)
T 3olh_A 102 LGVGAATHVVIYDASDQGLYSAPRVWWMFRAFGHHAVSLLDGGLRHWLRQNLPL 155 (302)
T ss_dssp TTCCSSCEEEEECCCTTSCSSHHHHHHHHHHTTCCCEEEETTHHHHHHHSCCC-
T ss_pred cCCCCCCEEEEEeCCCCCcchHHHHHHHHHHcCCCcEEECCCCHHHHHHcCCCc
Confidence 24788999999963 456999999999999999999999999999877653
No 71
>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2
Probab=99.67 E-value=3.3e-17 Score=157.21 Aligned_cols=100 Identities=16% Similarity=0.237 Sum_probs=88.2
Q ss_pred ccccchhHHHhhhcCCCccccceEEeccChhhhhccCCCCceecCcccccCCCCCccccCCCCCcEEEEeCCChhHHHHH
Q 022543 184 LQDIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSWGPDITVKFDPQKDTYVMCHHGMRSLQVA 263 (295)
Q Consensus 184 ~~~is~~el~~~l~~~~~~~~~~liDvR~~~e~~~ghIpgAinip~~~l~~~~~~~~~~~~~~~~iv~~C~~g~rs~~a~ 263 (295)
...++.+++.+.+.+ .+..+||+|++.||..||||||+|+|...|... +..++++++||+||.+|.||..++
T Consensus 376 ~~~i~~~~l~~~l~~----~~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~~----l~~l~~~~~ivv~C~sG~rs~~aa 447 (539)
T 1yt8_A 376 ADTIDPTTLADWLGE----PGTRVLDFTASANYAKRHIPGAAWVLRSQLKQA----LERLGTAERYVLTCGSSLLARFAV 447 (539)
T ss_dssp CCEECHHHHHHHTTS----TTEEEEECSCHHHHHHCBCTTCEECCGGGHHHH----HHHHCCCSEEEEECSSSHHHHHHH
T ss_pred CCccCHHHHHHHhcC----CCeEEEEeCCHHHhhcCcCCCchhCCHHHHHHH----HHhCCCCCeEEEEeCCChHHHHHH
Confidence 456788899988875 467899999999999999999999999887543 334688999999999999999999
Q ss_pred HHHHHcCCCCeEEecchHHHcccccCCC
Q 022543 264 QWLQTQGFRRVFNVSGGIHAYATKVDPS 291 (295)
Q Consensus 264 ~~L~~~G~~~v~~l~GG~~~W~~~~~p~ 291 (295)
..|+.+||.+|++|+||+.+|...+.|.
T Consensus 448 ~~L~~~G~~~v~~l~GG~~~W~~~g~pv 475 (539)
T 1yt8_A 448 AEVQALSGKPVFLLDGGTSAWVAAGLPT 475 (539)
T ss_dssp HHHHHHHCSCEEEETTHHHHHHHTTCCC
T ss_pred HHHHHcCCCCEEEeCCcHHHHHhCCCCc
Confidence 9999999999999999999999877764
No 72
>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A
Probab=99.66 E-value=6.3e-17 Score=150.87 Aligned_cols=102 Identities=16% Similarity=0.292 Sum_probs=81.5
Q ss_pred cccchhHHHhhhcCCCccccceEEeccChhhh-----------hccCCCCceecCcc-------cccCCCC------C--
Q 022543 185 QDIQPDELHKKMQDPNFHKEAQLIDVREPEEV-----------ALSSLPGFQVLPLR-------QFGSWGP------D-- 238 (295)
Q Consensus 185 ~~is~~el~~~l~~~~~~~~~~liDvR~~~e~-----------~~ghIpgAinip~~-------~l~~~~~------~-- 238 (295)
..++.+++.+.+.+ .+..+||+|++.|| ..||||||+|+|+. .+..... +
T Consensus 272 ~~i~~~e~~~~l~~----~~~~liDvR~~~e~~G~~~~~~~~~~~GhIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~~l~ 347 (423)
T 2wlr_A 272 LMLDMEQARGLLHR----QDASLVSIRSWPEFIGTTSGYSYIKPKGEIAGARWGHAGSDSTHMEDFHNPDGTMRSADDIT 347 (423)
T ss_dssp GEECHHHHHTTTTC----SSEEEEECSCHHHHHTSCCSSTTCCCCSEETTCEECCCCSSTTCCGGGBCTTSSBCCHHHHH
T ss_pred heecHHHHHHHhcC----CCceEEecCchhheeeeccCCCCCCcCCCCCCccccccccccccHHHHcCCCCcCCCHHHHH
Confidence 34777888887764 46789999999999 78999999999986 1111000 1
Q ss_pred -cc--ccCCCCCcEEEEeCCChhHHHHHHHHHHcCCCCeEEecchHHHccc-ccCC
Q 022543 239 -IT--VKFDPQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIHAYAT-KVDP 290 (295)
Q Consensus 239 -~~--~~~~~~~~iv~~C~~g~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~-~~~p 290 (295)
.+ ..++++++||+||++|.||..++..|+.+||+||++|+|||.+|.. .+.|
T Consensus 348 ~~~~~~~~~~~~~ivvyC~sG~rs~~aa~~L~~~G~~~v~~~~GG~~~W~~~~~~P 403 (423)
T 2wlr_A 348 AMWKAWNIKPEQQVSFYCGTGWRASETFMYARAMGWKNVSVYDGGWYEWSSDPKNP 403 (423)
T ss_dssp HHHHTTTCCTTSEEEEECSSSHHHHHHHHHHHHTTCSSEEEESSHHHHHTTSTTSC
T ss_pred HHHHHcCCCCCCcEEEECCcHHHHHHHHHHHHHcCCCCcceeCccHHHHhcCCCCC
Confidence 11 2467899999999999999999999999999999999999999987 4444
No 73
>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A
Probab=99.66 E-value=1.1e-16 Score=149.31 Aligned_cols=105 Identities=17% Similarity=0.197 Sum_probs=83.6
Q ss_pred ccchhHHHhhhcCCCc----cccceEEecc--ChhhhhccCCCCceecCcccccCCCCC----------cc--ccCCCCC
Q 022543 186 DIQPDELHKKMQDPNF----HKEAQLIDVR--EPEEVALSSLPGFQVLPLRQFGSWGPD----------IT--VKFDPQK 247 (295)
Q Consensus 186 ~is~~el~~~l~~~~~----~~~~~liDvR--~~~e~~~ghIpgAinip~~~l~~~~~~----------~~--~~~~~~~ 247 (295)
.++.+++.+++..... ..+..+||+| ++.+|..||||||+|+|+..+...... .+ ..+++++
T Consensus 125 ~i~~~~l~~~~~~~~~~~~~~~~~~liDvR~~~~~e~~~ghIpgA~nip~~~~~~~~~~~~~~~~~l~~~~~~~gi~~~~ 204 (423)
T 2wlr_A 125 LVYPQWLHDLQQGKEVTAKPAGDWKVIEAAWGAPKLYLISHIPGADYIDTNEVESEPLWNKVSDEQLKAMLAKHGIRHDT 204 (423)
T ss_dssp EECHHHHHHHHTTCCCTTCCSSCEEEEEEESSSCSHHHHCBCTTCEEEEGGGTEETTTTEECCHHHHHHHHHHTTCCTTS
T ss_pred ccCHHHHHHHhhccccccccCCCeEEEEecCCCchhhccCcCCCcEEcCHHHhccCCCCCCCCHHHHHHHHHHcCCCCCC
Confidence 4566777776653211 1357899999 999999999999999999887541111 11 2357899
Q ss_pred cEEEEeCCChhHHHHHHHHHHcCCCCeEEecchHHHcccccCC
Q 022543 248 DTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIHAYATKVDP 290 (295)
Q Consensus 248 ~iv~~C~~g~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~~~p 290 (295)
+||+||++|.||..++..|+.+||+||++|+|||.+|...+.|
T Consensus 205 ~ivvyC~~G~~a~~~~~~L~~~G~~~v~~l~Gg~~~W~~~g~p 247 (423)
T 2wlr_A 205 TVILYGRDVYAAARVAQIMLYAGVKDVRLLDGGWQTWSDAGLP 247 (423)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHTCSCEEEETTTHHHHHHTTCC
T ss_pred eEEEECCCchHHHHHHHHHHHcCCCCeEEECCCHHHHhhCCCC
Confidence 9999999999999999999999999999999999999876654
No 74
>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3
Probab=99.64 E-value=1.3e-16 Score=146.06 Aligned_cols=99 Identities=11% Similarity=0.095 Sum_probs=80.6
Q ss_pred cccchhHHHhhhcCCCccccceEEeccC--------hhhhhccCCCCceecCccc-ccCCC-----C-C---------cc
Q 022543 185 QDIQPDELHKKMQDPNFHKEAQLIDVRE--------PEEVALSSLPGFQVLPLRQ-FGSWG-----P-D---------IT 240 (295)
Q Consensus 185 ~~is~~el~~~l~~~~~~~~~~liDvR~--------~~e~~~ghIpgAinip~~~-l~~~~-----~-~---------~~ 240 (295)
..++++++.+.+. . .++||+|. +.||..||||||+|+|+.. +.... . . .+
T Consensus 14 ~~Is~~el~~~l~-----~-~~iIDvR~~~~~~~~~~~ey~~gHIpGAi~ip~~~~l~~~~~~~~~~~~lp~~~~f~~~l 87 (373)
T 1okg_A 14 VFLDPSEVADHLA-----E-YRIVDCRYSLKIKDHGSIQYAKEHVKSAIRADVDTNLSKLVPTSTARHPLPPXAEFIDWC 87 (373)
T ss_dssp CEECHHHHTTCGG-----G-SEEEECCCCSSSTTTTTTHHHHCEETTCEECCTTTTSCCCCTTCCCSSCCCCHHHHHHHH
T ss_pred cEEcHHHHHHHcC-----C-cEEEEecCCccccccchhHHhhCcCCCCEEeCchhhhhcccccCCccccCCCHHHHHHHH
Confidence 4578888887775 2 68999998 6999999999999999986 64320 0 0 01
Q ss_pred --ccCCCCCcEEEEe-CCChhHH-HHHHHHHHcCCCCeEEecchHHHcccccCC
Q 022543 241 --VKFDPQKDTYVMC-HHGMRSL-QVAQWLQTQGFRRVFNVSGGIHAYATKVDP 290 (295)
Q Consensus 241 --~~~~~~~~iv~~C-~~g~rs~-~a~~~L~~~G~~~v~~l~GG~~~W~~~~~p 290 (295)
..++++++||||| .+|.+|+ ++++.|+.+|| ||++|+||+.+|...+.|
T Consensus 88 ~~~gi~~d~~VVvYc~~~G~rsa~ra~~~L~~~G~-~V~~L~GG~~aW~~~g~p 140 (373)
T 1okg_A 88 MANGMAGELPVLCYDDECGAMGGCRLWWMLNSLGA-DAYVINGGFQACKAAGLE 140 (373)
T ss_dssp HHTTCSSSSCEEEECSSTTTTTHHHHHHHHHHHTC-CEEEETTTTHHHHTTTCC
T ss_pred HHcCCCCCCeEEEEeCCCCchHHHHHHHHHHHcCC-eEEEeCCCHHHHHhhcCC
Confidence 2357899999999 7888886 99999999999 999999999999987765
No 75
>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3
Probab=99.63 E-value=1.6e-16 Score=145.64 Aligned_cols=84 Identities=14% Similarity=0.188 Sum_probs=69.5
Q ss_pred ccceEEeccChhhhh-----------ccCCCCceecCccccc--CCCCC----------ccc----cCCC---CCcEEEE
Q 022543 203 KEAQLIDVREPEEVA-----------LSSLPGFQVLPLRQFG--SWGPD----------ITV----KFDP---QKDTYVM 252 (295)
Q Consensus 203 ~~~~liDvR~~~e~~-----------~ghIpgAinip~~~l~--~~~~~----------~~~----~~~~---~~~iv~~ 252 (295)
.+..+||+|++.||. .||||||+|||+..+. ..... .+. .+++ +++||+|
T Consensus 173 ~~~~lIDvR~~~Ef~G~~~~~~~~~~~GhIpGAiniP~~~l~~~~~~~~~~~~~~~l~~~~~~~~~gi~~~~~d~~ivvy 252 (373)
T 1okg_A 173 PQAIITDARSADRFASTVRPYAADKMPGHIEGARNLPYTSHLVTRGDGKVLRSEEEIRHNIMTVVQGAGDAADLSSFVFS 252 (373)
T ss_dssp TTCCEEECSCHHHHTCCSSCCTTCSSSSCSTTCEECCGGGGEECCSSSCEECCHHHHHHHHHTTCC-----CCCTTSEEE
T ss_pred cCceEEeCCCHHHccccccccccCCcCccCCCcEEecHHHhhccCCCCCccCCHHHHHHHHHhhhcCCCcccCCCCEEEE
Confidence 457899999999999 8999999999998875 21111 112 2467 8999999
Q ss_pred eCCChhHHHHHHHHHHcCCCCeEEecchHHHccc
Q 022543 253 CHHGMRSLQVAQWLQTQGFRRVFNVSGGIHAYAT 286 (295)
Q Consensus 253 C~~g~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~ 286 (295)
|++|.||..++..|+.+||+||++|+|||.+|..
T Consensus 253 C~sG~rs~~a~~~L~~~G~~~v~~~~GG~~~W~~ 286 (373)
T 1okg_A 253 CGSGVTACINIALVHHLGLGHPYLYCGSWSEYSG 286 (373)
T ss_dssp CSSSSTHHHHHHHHHHTTSCCCEECSSHHHHHHH
T ss_pred CCchHHHHHHHHHHHHcCCCCeeEeCChHHHHhc
Confidence 9999999999999999999999999999999976
No 76
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=99.62 E-value=2.8e-17 Score=155.04 Aligned_cols=80 Identities=24% Similarity=0.407 Sum_probs=0.0
Q ss_pred ccceEEeccChhhhhccCCCCceecCcccccCCCCCccccCCCCCcEEEEeCCChhHHHHHHHHHHcCCCCeEEecchHH
Q 022543 203 KEAQLIDVREPEEVALSSLPGFQVLPLRQFGSWGPDITVKFDPQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIH 282 (295)
Q Consensus 203 ~~~~liDvR~~~e~~~ghIpgAinip~~~l~~~~~~~~~~~~~~~~iv~~C~~g~rs~~a~~~L~~~G~~~v~~l~GG~~ 282 (295)
.+..+||||++.||..||||||+|+|+..+... +..++++++||+||++|.||..++..|+.+||+||++|+|||.
T Consensus 386 ~~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~~----~~~l~~~~~iv~~C~~G~rs~~a~~~L~~~G~~~v~~l~GG~~ 461 (466)
T 3r2u_A 386 NESHILDVRNDNEWNNGHLSQAVHVPHGKLLET----DLPFNKNDVIYVHCQSGIRSSIAIGILEHKGYHNIINVNEGYK 461 (466)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCcEEEEeCCHHHHhcCcCCCCEECCHHHHHHH----HhhCCCCCeEEEECCCChHHHHHHHHHHHcCCCCEEEecChHH
Confidence 457899999999999999999999999988654 3447899999999999999999999999999999999999999
Q ss_pred Hccc
Q 022543 283 AYAT 286 (295)
Q Consensus 283 ~W~~ 286 (295)
+|.+
T Consensus 462 ~W~~ 465 (466)
T 3r2u_A 462 DIQL 465 (466)
T ss_dssp ----
T ss_pred HHhh
Confidence 9974
No 77
>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A
Probab=99.59 E-value=5e-16 Score=133.09 Aligned_cols=80 Identities=19% Similarity=0.177 Sum_probs=65.9
Q ss_pred ccceEEeccChhhhhccCCCCceecCcc--cccCC-----------CCCccccCCCCCcEEEEeCCCh-hHHHHHHHHHH
Q 022543 203 KEAQLIDVREPEEVALSSLPGFQVLPLR--QFGSW-----------GPDITVKFDPQKDTYVMCHHGM-RSLQVAQWLQT 268 (295)
Q Consensus 203 ~~~~liDvR~~~e~~~ghIpgAinip~~--~l~~~-----------~~~~~~~~~~~~~iv~~C~~g~-rs~~a~~~L~~ 268 (295)
++.++||+|++.+|..||||||+|+|+. .+... ....+..++.+++|||||.+|. +|..+++.|+
T Consensus 5 ~~~~iiDvR~~~ey~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivvyc~~g~~~s~~a~~~L~- 83 (230)
T 2eg4_A 5 EDAVLVDTRPRPAYEAGHLPGARHLDLSAPKLRLREEAELKALEGGLTELFQTLGLRSPVVLYDEGLTSRLCRTAFFLG- 83 (230)
T ss_dssp TTCEEEECSCHHHHHHCBCTTCEECCCCSCCCCCCSHHHHHHHHHHHHHHHHHTTCCSSEEEECSSSCHHHHHHHHHHH-
T ss_pred CCEEEEECCChhhHhhCcCCCCEECCccchhcccCCCCCcCCCHHHHHHHHHhcCCCCEEEEEcCCCCccHHHHHHHHH-
Confidence 5678999999999999999999999998 44210 0111223455899999999998 9999999999
Q ss_pred cCCCCeEEecchHHHccc
Q 022543 269 QGFRRVFNVSGGIHAYAT 286 (295)
Q Consensus 269 ~G~~~v~~l~GG~~~W~~ 286 (295)
+||+||++|+|| |..
T Consensus 84 ~G~~~v~~l~GG---W~~ 98 (230)
T 2eg4_A 84 LGGLEVQLWTEG---WEP 98 (230)
T ss_dssp HTTCCEEEECSS---CGG
T ss_pred cCCceEEEeCCC---Ccc
Confidence 999999999999 875
No 78
>1whb_A KIAA0055; deubiqutinating enzyme, UBPY, structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; NMR {Homo sapiens} SCOP: c.46.1.4
Probab=99.57 E-value=1.4e-15 Score=122.72 Aligned_cols=102 Identities=15% Similarity=0.085 Sum_probs=71.3
Q ss_pred ccccchhHHHhhhcCCCccccceEEeccChhhhhccCCCCceecCcccccCCCC--CccccCC-----------CCCcEE
Q 022543 184 LQDIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSWGP--DITVKFD-----------PQKDTY 250 (295)
Q Consensus 184 ~~~is~~el~~~l~~~~~~~~~~liDvR~~~e~~~ghIpgAinip~~~l~~~~~--~~~~~~~-----------~~~~iv 250 (295)
...++++++.+++.+.. .+.++||||++.||+.||||||+|||+..+..... .+...++ ..+.||
T Consensus 14 ~~~i~~~~l~~~l~~~~--~~~~liDvR~~~ey~~gHI~gainip~~~~~~~~~~~~l~~~lp~~~~~~~~~~~~~~~VV 91 (157)
T 1whb_A 14 KGAITAKELYTMMTDKN--ISLIIMDARRMQDYQDSCILHSLSVPEEAISPGVTASWIEAHLPDDSKDTWKKRGNVEYVV 91 (157)
T ss_dssp CSEECHHHHHHHHTCSS--SCEEEEEESCHHHHHHCCBTTCEEECSSSCCTTCCHHHHHHSCCTTHHHHHHGGGTSSEEE
T ss_pred CCccCHHHHHHHHhcCC--CCeEEEECCCHHHHHhccccCCcccCHHHccCCCcHHHHHHHCChHHHHHHHhcCCCCEEE
Confidence 45588899999887521 26799999999999999999999999876643210 0111112 234489
Q ss_pred EEeCCChh----HHHHHHHHHH----c----CCC-CeEEecchHHHcccc
Q 022543 251 VMCHHGMR----SLQVAQWLQT----Q----GFR-RVFNVSGGIHAYATK 287 (295)
Q Consensus 251 ~~C~~g~r----s~~a~~~L~~----~----G~~-~v~~l~GG~~~W~~~ 287 (295)
+||.+|.+ +..+++.|.+ . ||. +|++|+||+.+|...
T Consensus 92 vy~~~~~~~~~~a~~~~~~L~~~L~~~~~~~~~~~~V~~L~GG~~aW~~~ 141 (157)
T 1whb_A 92 LLDWFSSAKDLQIGTTLRSLKDALFKWESKTVLRNEPLVLEGGYENWLLC 141 (157)
T ss_dssp EECSSCCGGGCCTTCHHHHHHHTTTTTCSSCCCSSCCEEESSCHHHHHHH
T ss_pred EECCCCCccccccccHHHHHHHHHHHhccccccCCCeEEEcchHHHHHHH
Confidence 99987754 3455666652 2 454 399999999999864
No 79
>2gwf_A Ubiquitin carboxyl-terminal hydrolase 8; protein-protein complex, E3 ligase, protein ubiquitination, hydrolase, protease, UBL conjugation pathway; 2.30A {Homo sapiens} SCOP: c.46.1.4
Probab=99.57 E-value=1.3e-15 Score=122.84 Aligned_cols=103 Identities=15% Similarity=0.073 Sum_probs=71.0
Q ss_pred hccccchhHHHhhhcCCCccccceEEeccChhhhhccCCCCceecCcccccCCCC--CccccC-----------CCCCcE
Q 022543 183 LLQDIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQFGSWGP--DITVKF-----------DPQKDT 249 (295)
Q Consensus 183 ~~~~is~~el~~~l~~~~~~~~~~liDvR~~~e~~~ghIpgAinip~~~l~~~~~--~~~~~~-----------~~~~~i 249 (295)
....++++++.+++.+.. .+.++||||++.||+.||||||+|||+..+..... .+...+ .+.+.|
T Consensus 18 ~~~~is~~~l~~~l~~~~--~~~~liDvR~~~ey~~gHI~gAinip~~~l~~~~~~~~l~~~lp~~~~~l~~~~~~~~~V 95 (157)
T 2gwf_A 18 GSGAITAKELYTMMTDKN--ISLIIMDARRMQDYQDSCILHSLSVPEEAISPGVTASWIEAHLPDDSKDTWKKRGNVEYV 95 (157)
T ss_dssp -CCEECHHHHHHHHHSTT--SCEEEEECSCHHHHHHSCBTTCEECCGGGCCTTCCHHHHHHTSCHHHHHHHHTTTTSSEE
T ss_pred CCCccCHHHHHHHHhcCC--CCeEEEECCCHHHHHhcCccCCcccCHHHcCCCCcHHHHHHHcCHHHHHHHHhcCCCCEE
Confidence 345688899999887521 26799999999999999999999999987643210 000111 233458
Q ss_pred EEEeCCChh----HHHHHHHHH----Hc----CCCC-eEEecchHHHcccc
Q 022543 250 YVMCHHGMR----SLQVAQWLQ----TQ----GFRR-VFNVSGGIHAYATK 287 (295)
Q Consensus 250 v~~C~~g~r----s~~a~~~L~----~~----G~~~-v~~l~GG~~~W~~~ 287 (295)
|+||.+|.+ +..+++.|. .. ||.+ |++|+||+.+|...
T Consensus 96 Vvy~~~~~~~~~~a~~~l~~L~~~L~~~~~~~~~~~~V~~L~GG~~aW~~~ 146 (157)
T 2gwf_A 96 VLLDWFSSAKDLQIGTTLRSLKDALFKWESKTVLRNEPLVLEGGYENWLLC 146 (157)
T ss_dssp EEECSSCCGGGCCTTCHHHHHHHHHHTSCCSSCCSSCCEEETTHHHHHHHH
T ss_pred EEEcCCCCccccCcccHHHHHHHHHHhhccccccCCceEEEccHHHHHHHH
Confidence 999987754 234555554 22 4543 99999999999863
No 80
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.44 E-value=4.2e-14 Score=133.60 Aligned_cols=98 Identities=16% Similarity=0.280 Sum_probs=80.3
Q ss_pred hccccchhHHHhhhcCCCccccceEEeccChhhhhccCCCCceecCccc-ccCCCCCccccCCCCCcEEEEeCCChhHHH
Q 022543 183 LLQDIQPDELHKKMQDPNFHKEAQLIDVREPEEVALSSLPGFQVLPLRQ-FGSWGPDITVKFDPQKDTYVMCHHGMRSLQ 261 (295)
Q Consensus 183 ~~~~is~~el~~~l~~~~~~~~~~liDvR~~~e~~~ghIpgAinip~~~-l~~~~~~~~~~~~~~~~iv~~C~~g~rs~~ 261 (295)
....++++++.+.+.+ . ++||+|.+.+|..||||||+|+|++. +..+.+.+ .+++++|||||..|. +..
T Consensus 271 ~~~~is~~~l~~~l~~-----~-~iiD~R~~~~y~~ghIpGA~~i~~~~~~~~~~~~l---~~~~~~vvvy~~~~~-~~~ 340 (474)
T 3tp9_A 271 ERVDLPPERVRAWREG-----G-VVLDVRPADAFAKRHLAGSLNIPWNKSFVTWAGWL---LPADRPIHLLAADAI-APD 340 (474)
T ss_dssp EECCCCGGGHHHHHHT-----S-EEEECSCHHHHHHSEETTCEECCSSTTHHHHHHHH---CCSSSCEEEECCTTT-HHH
T ss_pred CCceeCHHHHHHHhCC-----C-EEEECCChHHHhccCCCCeEEECcchHHHHHHHhc---CCCCCeEEEEECCCc-HHH
Confidence 3567889999998875 3 89999999999999999999999874 43332222 267899999999876 666
Q ss_pred HHHHHHHcCCCCeEEecchHHHcccccCC
Q 022543 262 VAQWLQTQGFRRVFNVSGGIHAYATKVDP 290 (295)
Q Consensus 262 a~~~L~~~G~~~v~~l~GG~~~W~~~~~p 290 (295)
+++.|+.+||++|+++.+|+.+|...+.|
T Consensus 341 ~~~~L~~~G~~~v~~~l~G~~~W~~~g~~ 369 (474)
T 3tp9_A 341 VIRALRSIGIDDVVDWTDPAAVDRAAPDD 369 (474)
T ss_dssp HHHHHHHTTCCCEEEEECGGGGTTCCGGG
T ss_pred HHHHHHHcCCcceEEecCcHHHHHhcccc
Confidence 99999999999999877799999876543
No 81
>3rgc_A Possible periplasmic protein; ppiase, chaperone; 2.30A {Campylobacter jejuni}
Probab=99.35 E-value=5.5e-14 Score=122.03 Aligned_cols=94 Identities=14% Similarity=0.097 Sum_probs=74.8
Q ss_pred cCchhhhccc-cCCCCCCCCCCCceEEEeeEEeccchHHHHHHHHHHhCCCCcHHHHHHHhCCCCCccCCCcccceeCCC
Q 022543 66 FTSPKAASFS-SGTEGSSPGGGDREILVQHLLVKEDDLNLLSELQRRVSQGKDLSDLAVEHSICPSKGEGGMLGWVRKGQ 144 (295)
Q Consensus 66 ~~~~e~~~y~-~~~~~~~~~~~~~~~~~~~Il~~~~~~~~a~~i~~~i~~g~~F~~~a~~~S~d~~~~~gG~lg~~~~~~ 144 (295)
+++.|...|. .+. ..+..+++|+++||++..+ +++++|++|++|+ -||++||++.+.
T Consensus 114 vtd~ei~~yy~~~~---~~f~~~~~v~~~~i~~~~~------~~~~~l~~g~~f~-------------l~g~lg~~~~~~ 171 (252)
T 3rgc_A 114 FSDDGAKKFFEQNK---DKFTFYTQINANIYLSNNP------QTLENIKNTKKTI-------------LKPQNASLNTSN 171 (252)
T ss_dssp CCHHHHHHHHHTCG---GGCCEESEEEEEEEECSCH------HHHHHHHHHCCCC-------------SCCEEEEEETTT
T ss_pred CCHHHHHHHHHhCH---HhcCCCceEEEEEecCCCH------HHHHHHHhCCCcc-------------cccccceecHHh
Confidence 3555554443 443 2345678999999998653 3456777888886 378999999999
Q ss_pred CcHHHHHHHhcCCCCcee-eeeecCceeeeehhhhhhh
Q 022543 145 LVPEFEEVAFTTPLNKVA-RCKTKFGWHLLQVLSEREA 181 (295)
Q Consensus 145 ~~~~~~~~~~~l~~g~is-pv~~~~G~~ii~v~~~~~~ 181 (295)
++|+|..++++|++|++| |+++++||||+++.++++.
T Consensus 172 l~~~~~~a~~~l~~G~is~pv~t~~G~hiikv~~~~~~ 209 (252)
T 3rgc_A 172 ADPRLLGLLSQIPVGSFSPVLNGKNGYELYEVKSKDGT 209 (252)
T ss_dssp SCHHHHHHHHHSCTTCBCCCBTTTTCEEEEEEEECSCE
T ss_pred cCHHHHHHHHcCCCCCcCCcEEeCCeEEEEEEecccCC
Confidence 999999999999999999 9999999999999987763
No 82
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}
Probab=99.30 E-value=5.7e-12 Score=112.95 Aligned_cols=105 Identities=13% Similarity=0.157 Sum_probs=79.5
Q ss_pred ccccchhHHHhhhcCCCccccceEEecc--------C-hhhh-hccCCCCceecCcccccCCCCCcc-------------
Q 022543 184 LQDIQPDELHKKMQDPNFHKEAQLIDVR--------E-PEEV-ALSSLPGFQVLPLRQFGSWGPDIT------------- 240 (295)
Q Consensus 184 ~~~is~~el~~~l~~~~~~~~~~liDvR--------~-~~e~-~~ghIpgAinip~~~l~~~~~~~~------------- 240 (295)
+.-|+++++.+++..... .++++||++ . ..|| +.||||||+++.++.+......+.
T Consensus 27 ~~LIsp~~l~~ll~~~~~-~rvv~lDasw~lP~~~r~~~~E~~~~~HIPGAv~~Dld~~~d~~~~~ph~LP~~~~f~~~l 105 (327)
T 3utn_X 27 FDLISPKAFVKLVASEKV-HRIVPVDATWYLPSWKLDNKVDFLTKPRIPNSIFFDIDAISDKKSPYPHMFPTKKVFDDAM 105 (327)
T ss_dssp CEEECHHHHHHHHHHCSS-SCEEEEECCCCCGGGCCCHHHHHHHSCBCTTCEECCTTTSSCTTSSSTTCCCCHHHHHHHH
T ss_pred ccccCHHHHHHHHhCCCC-CcEEEEEecCCCCCCCCCHHHHHHhhCcCCCCeeeChHHhcCCCCCCCCCCcCHHHHHHHH
Confidence 345888999998865421 457889985 2 3466 789999999999876643221111
Q ss_pred --ccCCCCCcEEEEeCCC-hhHHHHHHHHHHcCCCCeEEecchHHHcccccCC
Q 022543 241 --VKFDPQKDTYVMCHHG-MRSLQVAQWLQTQGFRRVFNVSGGIHAYATKVDP 290 (295)
Q Consensus 241 --~~~~~~~~iv~~C~~g-~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~~~p 290 (295)
..+.++++||||.+.| ..|+++++.|+.+||++|++|+|| .+|..++.|
T Consensus 106 ~~lGI~~d~~VVvYD~~~~~~AaR~wW~Lr~~Gh~~V~vLdGg-~aW~~~g~p 157 (327)
T 3utn_X 106 SNLGVQKDDILVVYDRVGNFSSPRCAWTLGVMGHPKVYLLNNF-NQYREFKYP 157 (327)
T ss_dssp HHTTCCTTCEEEEECSSSSSSHHHHHHHHHHTTCSEEEEESCH-HHHHHTTCC
T ss_pred HHcCCCCCCEEEEEeCCCCcHHHHHHHHHHHcCCCceeecccH-HHHHHhCCC
Confidence 2357899999998865 457899999999999999999987 899988765
No 83
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=99.21 E-value=9.5e-12 Score=117.22 Aligned_cols=79 Identities=11% Similarity=0.055 Sum_probs=62.7
Q ss_pred ccceEEeccChhhhhccCCCCceecCccc-ccCCCCCccccCCCCCcEEEEeCCChhHHHHHHHHHHcCCCCeEE-ecch
Q 022543 203 KEAQLIDVREPEEVALSSLPGFQVLPLRQ-FGSWGPDITVKFDPQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFN-VSGG 280 (295)
Q Consensus 203 ~~~~liDvR~~~e~~~ghIpgAinip~~~-l~~~~~~~~~~~~~~~~iv~~C~~g~rs~~a~~~L~~~G~~~v~~-l~GG 280 (295)
.+.++||+|++.+|..||||||+|+|+.. +..+.+.+ ++++++||+||. +.++..+++.|+.+||++|+. ++|+
T Consensus 295 ~~~~ilD~R~~~~y~~gHIpGAv~ip~~~~~~~~~~~~---~~~~~~vvly~~-~~~a~~a~~~L~~~G~~~v~~~l~g~ 370 (466)
T 3r2u_A 295 TNRLTFDLRSKEAYHGGHIEGTINIPYDKNFINQIGWY---LNYDQEINLIGD-YHLVSKATHTLQLIGYDDIAGYQLPQ 370 (466)
T ss_dssp CCSEEEECSCHHHHHHSCCTTCEECCSSTTHHHHHTTT---CCTTSCEEEESC-HHHHHHHHHHHHTTTCCCEEEEECCC
T ss_pred CCeEEEECCCHHHHhhCCCCCcEECCccHHHHHHHHhc---cCCCCeEEEEEC-CchHHHHHHHhhhhhcccccccccCc
Confidence 56799999999999999999999999874 54433332 478999999999 668999999999999999997 6777
Q ss_pred HHHcc
Q 022543 281 IHAYA 285 (295)
Q Consensus 281 ~~~W~ 285 (295)
...|.
T Consensus 371 ~~~~~ 375 (466)
T 3r2u_A 371 SKIQT 375 (466)
T ss_dssp -----
T ss_pred ccccH
Confidence 66554
No 84
>2lj4_A Peptidyl-prolyl CIS-trans isomerase/rotamase, PUT; tbpin1; NMR {Trypanosoma brucei}
Probab=98.55 E-value=8.3e-09 Score=78.26 Aligned_cols=78 Identities=9% Similarity=-0.108 Sum_probs=64.7
Q ss_pred ccccccccccccCcchhhhccCchhh-hhhccccCCCCCCCccceeecccccCchhhhccccCCCCCC-CCCCCceEEEe
Q 022543 16 ITQSLIPTLNLSSSSSLSIFQKPASF-ASFYKSLNPASNSNSFHIHIISRSFTSPKAASFSSGTEGSS-PGGGDREILVQ 93 (295)
Q Consensus 16 ~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~y~~~~~~~~-~~~~~~~~~~~ 93 (295)
.++.....++++++.+..+...|+.+ +.||+ ..++.+||+|||+..++++++|+.++|.++.++++ +..++--||+-
T Consensus 33 ~~~~a~~~~~~i~~~i~~g~~~F~~lA~~~Sd-~~sa~~GGdLG~~~~~~~~~~f~~a~~~l~~GeiS~pv~t~~G~HII 111 (115)
T 2lj4_A 33 TYEDAIKELQKWSQRIASGEVSFEEAASQRSD-CGSYASGGDLGFFSSGEMMKPFEDAVRALKIGDISPIVQTDSGLHII 111 (115)
T ss_dssp CHHHHHHHHHHHHHHHHHTSSCHHHHHHHHCC-SGGGGTTSEEEEEETTSSCHHHHHHHTTSCBTCBCCCEECSSSEEEE
T ss_pred cHHHHHHHHHHHHHHHHcCchhHHHHHHHhCC-CcccccCCccceecCCCCCchHHHHHhcCCCCCCCCcEEeCCeEEEE
Confidence 34455667888899999988899999 99994 57899999999999999999999999999888765 45666677764
Q ss_pred e
Q 022543 94 H 94 (295)
Q Consensus 94 ~ 94 (295)
.
T Consensus 112 k 112 (115)
T 2lj4_A 112 K 112 (115)
T ss_dssp E
T ss_pred E
Confidence 3
No 85
>4g2p_A Chaperone SURA; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, pcsep; 1.82A {Salmonella enterica subsp}
Probab=98.25 E-value=1e-07 Score=71.69 Aligned_cols=78 Identities=12% Similarity=-0.094 Sum_probs=65.7
Q ss_pred cccccccccCcchhhhccCchhh-hhhccccCCCCCCCccceeecccccCchhhhccccCCCCCC-CCCCCceEEEeeEE
Q 022543 19 SLIPTLNLSSSSSLSIFQKPASF-ASFYKSLNPASNSNSFHIHIISRSFTSPKAASFSSGTEGSS-PGGGDREILVQHLL 96 (295)
Q Consensus 19 ~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~y~~~~~~~~-~~~~~~~~~~~~Il 96 (295)
....+++++++.+..+..+|+.+ +.||+|+.++.+||+|||+..+.+.++|+.++|.++.++++ +...+.-||+-++.
T Consensus 26 ~a~~~a~~i~~~l~~G~~~F~~lA~~~S~d~~s~~~GG~lG~~~~~~l~~~f~~a~~~l~~Geis~pv~t~~G~hIikv~ 105 (110)
T 4g2p_A 26 QARLKLEEIAADIKSGKTTFAAAAKEYSQDPGSANQGGDLGWATPDIFDPAFRDALTKLHKGQISAPVHSSFGWHLIELL 105 (110)
T ss_dssp HHHHHHHHHHHHHHTTSSCHHHHHHHHCCCTTTGGGTTEEEEECGGGSCHHHHHHHHTCCTTCBCCCEEETTEEEEEEEE
T ss_pred HHHHHHHHHHHHHHcCcccHHHHHHHhCCCccccccccccCeecccccCHHHHHHHHcCCCCCcCccEEECCEEEEEEEE
Confidence 45567778888888876699999 99999999999999999999999999999999999888765 45666677766553
No 86
>3i6c_A Peptidyl-prolyl CIS-trans isomerase NIMA- interacting 1; SBDD, small molecule, ppiase, cell cycle, nucleus, phosphoprotein, rotamase; HET: GIA; 1.30A {Homo sapiens} PDB: 3ik8_A 3ikd_A* 3ikg_A* 3jyj_A* 3kac_A* 1nmw_A
Probab=98.02 E-value=2.5e-07 Score=70.82 Aligned_cols=79 Identities=16% Similarity=0.031 Sum_probs=63.2
Q ss_pred ccccccccccccCcchhhhccCchhh-hhhccccCCCCCCCccceeecccccCchhhhccccCCCCCC-CCCCCceEEEe
Q 022543 16 ITQSLIPTLNLSSSSSLSIFQKPASF-ASFYKSLNPASNSNSFHIHIISRSFTSPKAASFSSGTEGSS-PGGGDREILVQ 93 (295)
Q Consensus 16 ~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~y~~~~~~~~-~~~~~~~~~~~ 93 (295)
.++.....++++++.+..+..+|+.+ +.||++ .++.+||+|||+..+.++++|+.++|.+++++++ +...+.-||+-
T Consensus 41 ~~~~A~~~~~~i~~~l~~G~~~F~~lA~~~S~~-~sa~~GGdLG~~~~~~l~~~f~~a~f~l~~GeiS~pv~t~~G~hIi 119 (123)
T 3i6c_A 41 TQEEALELINGYIQKIKSGEEDFESLASQFSDC-SSAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHII 119 (123)
T ss_dssp CHHHHHHHHHHHHHHHHHTSSCHHHHHHHHCSS-GGGGGTTEEEEEETTTSCHHHHHHHHHSCTTCBCSCEEETTEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCcccHHHHHHHhCCC-chhhhCCceeeEcCCCCCHHHHHHHHhCCCCCccccEEECCEEEEE
Confidence 34455566777888888876799999 999976 5788999999999999999999999999887765 44566667665
Q ss_pred eE
Q 022543 94 HL 95 (295)
Q Consensus 94 ~I 95 (295)
.+
T Consensus 120 ~v 121 (123)
T 3i6c_A 120 LR 121 (123)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 87
>3gpk_A PPIC-type peptidyl-prolyl CIS-trans isomerase; rotamase,ppiase domain, 11189O3,PSI2., structural genomics; 1.55A {Novosphingobium aromaticivorans}
Probab=98.01 E-value=2.4e-07 Score=69.75 Aligned_cols=91 Identities=8% Similarity=-0.013 Sum_probs=70.5
Q ss_pred ccccCCchhhhhccccccccccccCcchhhhccCchhh-hhhccccCCCCCCCccceeecccccCchhhhccccCCCCCC
Q 022543 4 RASQLASPVLCAITQSLIPTLNLSSSSSLSIFQKPASF-ASFYKSLNPASNSNSFHIHIISRSFTSPKAASFSSGTEGSS 82 (295)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~y~~~~~~~~ 82 (295)
+.+||-=+.+++.++....+.+++++.+..+ .+|+.+ +.||+|+ ++.+||+|||+..+.++++|+.++|.+++++++
T Consensus 9 ~v~hIli~~~~~~~~~a~~~A~~i~~~l~~G-~~F~~lA~~~S~d~-sa~~GGdlG~~~~~~l~~~f~~a~~~l~~GeiS 86 (112)
T 3gpk_A 9 RIGEIFLAATEENKPQVFANAEKIVEQLKQG-GSFVAYARQYSEAS-TAAVGGDLGWIRLAQLPTELATTAASMGPGQLA 86 (112)
T ss_dssp EEEEEEEECCGGGHHHHHHHHHHHHHHHHTT-CCHHHHHHHHCCST-TGGGTTEEEEECGGGSCHHHHHHHHHCCTTCEE
T ss_pred EEEEEEEeCChhhHHHHHHHHHHHHHHHHCC-CCHHHHHHHhCCCc-chhcCcccceEcccccCHHHHHHHHhCCCCCcc
Confidence 3444432344556667777888888888777 599999 9999995 789999999999999999999999999887654
Q ss_pred -CCCCCceEEEeeEE
Q 022543 83 -PGGGDREILVQHLL 96 (295)
Q Consensus 83 -~~~~~~~~~~~~Il 96 (295)
+...+.-|++-.+.
T Consensus 87 ~pv~t~~G~hIikv~ 101 (112)
T 3gpk_A 87 GPVEIRGGFSILYLI 101 (112)
T ss_dssp EEEEETTEEEEEEEE
T ss_pred ceEEECCEEEEEEEE
Confidence 44566666665544
No 88
>3tc5_A Peptidyl-prolyl CIS-trans isomerase NIMA-interact; PIN1 mutant (R14A), oncogenic transformation, small molecule cycle, rotamase, phosphoprotein; HET: 3T5 P6G; 1.40A {Homo sapiens} PDB: 2itk_A* 2q5a_A* 2xp3_A* 2xp4_A* 2xp5_A* 2xp7_A* 2xp8_A* 2xp9_A* 2xpa_A* 2xpb_A* 3kab_A* 3kag_A* 3kah_A* 3kai_A* 3kce_A* 3ntp_A* 3odk_A* 3oob_A* 2zr6_A* 1f8a_B* ...
Probab=97.90 E-value=6.6e-07 Score=72.14 Aligned_cols=79 Identities=16% Similarity=0.032 Sum_probs=62.9
Q ss_pred ccccccccccccCcchhhhccCchhh-hhhccccCCCCCCCccceeecccccCchhhhccccCCCCCC-CCCCCceEEEe
Q 022543 16 ITQSLIPTLNLSSSSSLSIFQKPASF-ASFYKSLNPASNSNSFHIHIISRSFTSPKAASFSSGTEGSS-PGGGDREILVQ 93 (295)
Q Consensus 16 ~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~y~~~~~~~~-~~~~~~~~~~~ 93 (295)
.++.....++++++.+..+..+|+.+ ++||++ .++.+||+|||+..++++++|+.++|.+++++++ +.....-||+-
T Consensus 84 ~~~~A~~~~~~i~~~l~~g~~~F~~lA~~~Sd~-~sa~~GGdLG~~~~~~l~~~f~~a~f~l~~GeiS~pv~t~~G~hIi 162 (166)
T 3tc5_A 84 TKEEALELINGYIQKIKSGEEDFESLASQFSDC-SSAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHII 162 (166)
T ss_dssp CHHHHHHHHHHHHHHHHHTSSCHHHHHHHHCSS-GGGGGTTEEEEECTTSSCHHHHHHHHHSCTTCBCCCEEETTEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCccCHHHHHHHhCcc-cHHhcCCccceecccccCHHHHHHHHhCCCCCCcccEEECCEEEEE
Confidence 34455566777888888876799999 999976 6789999999999999999999999999888765 44555566654
Q ss_pred eE
Q 022543 94 HL 95 (295)
Q Consensus 94 ~I 95 (295)
.+
T Consensus 163 ~v 164 (166)
T 3tc5_A 163 LR 164 (166)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 89
>2pv1_A Chaperone SURA; surviVal protein A, peptidyl-prolyl CIS-trans isomerase domain, peptide, complex; 1.30A {Escherichia coli} SCOP: d.26.1.1 PDB: 2pv2_A
Probab=97.82 E-value=1.6e-06 Score=64.22 Aligned_cols=82 Identities=6% Similarity=-0.125 Sum_probs=64.3
Q ss_pred hhhhccccccccccccCcchhhhccCchhh-hhhccccCCCCCCCccceeecccccCchhhhccccCCCCCC-CCCCCce
Q 022543 12 VLCAITQSLIPTLNLSSSSSLSIFQKPASF-ASFYKSLNPASNSNSFHIHIISRSFTSPKAASFSSGTEGSS-PGGGDRE 89 (295)
Q Consensus 12 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~y~~~~~~~~-~~~~~~~ 89 (295)
.+++.++......+.+++.+..+ .+|+.+ +.||.++ ++.+||++||+..+.+.++|+.+.|.++.+.++ +...+.-
T Consensus 16 ~~~~~~~~a~~~a~~i~~~l~~g-~~F~~lA~~~S~~~-s~~~gG~lg~~~~~~l~~~f~~a~~~l~~G~is~pv~t~~G 93 (103)
T 2pv1_A 16 PTSDQVNEAESQARAIVDQARNG-ADFGKLAIAHSADQ-QALNGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVG 93 (103)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTT-CCHHHHHHHHCCST-TGGGTTEEEEECGGGSCHHHHHHTTTCCTTCEEEEEEETTE
T ss_pred CCHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHHhCCCc-ccccCCccceEchhhcCHHHHHHHHcCCCCCeeccEEECCE
Confidence 35555666667777888888776 489999 9999997 678999999999999999999999999887654 3455555
Q ss_pred EEEeeE
Q 022543 90 ILVQHL 95 (295)
Q Consensus 90 ~~~~~I 95 (295)
+|+-.+
T Consensus 94 ~hii~v 99 (103)
T 2pv1_A 94 FHILKV 99 (103)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 655443
No 90
>2jzv_A Foldase protein PRSA; ppiase, parvulin, proline isomerase, lipoprotein, membrane, palmitate, rotamase; NMR {Staphylococcus aureus}
Probab=97.79 E-value=1.4e-06 Score=65.44 Aligned_cols=75 Identities=7% Similarity=-0.137 Sum_probs=60.5
Q ss_pred ccccccccCcchhhhccCchhh-hhhccccCCCCCCCccceeecccccCchhhhccccCCCCCC-CCCCCceEEEee
Q 022543 20 LIPTLNLSSSSSLSIFQKPASF-ASFYKSLNPASNSNSFHIHIISRSFTSPKAASFSSGTEGSS-PGGGDREILVQH 94 (295)
Q Consensus 20 ~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~y~~~~~~~~-~~~~~~~~~~~~ 94 (295)
...+.+.+++.+..+..+|+.+ ++||+++.++.+||++||+..+.+.++|+.++|.++.+.++ +...+.-+|+-.
T Consensus 32 ~~~~a~~i~~~l~~g~~~F~~lA~~~S~d~~s~~~gG~lG~~~~~~l~~~f~~a~~~l~~G~is~pv~t~~G~hIi~ 108 (111)
T 2jzv_A 32 AKQKAEEIQKEVSKDPSKFGEIAKKESMDTGSAKKDGELGYVLKGQTDKDFEKALFKLKDGEVSEVVKSSFGYHIIK 108 (111)
T ss_dssp HHHHHHHHHHHHHSCTTSHHHHHHHHCSCHHHHTTTTEEEEEETTSSCHHHHHHHHTCCTTCBCCCEEETTEEEEEE
T ss_pred HHHHHHHHHHHHHcCcccHHHHHHHHCCCcchhhhCCccceecCCcccHHHHHHHHhCCCCCcCccEEECCEEEEEE
Confidence 4455667777887764699999 99999998899999999999999999999999999887654 445555555543
No 91
>1zk6_A Foldase protein PRSA; alpha/beta structure, isomerase; NMR {Bacillus subtilis}
Probab=97.66 E-value=1.1e-05 Score=58.48 Aligned_cols=70 Identities=11% Similarity=-0.019 Sum_probs=56.7
Q ss_pred ccccCcchhhhccCchhh-hhhccccCCCCCCCccceee-cccccCchhhhccccCCCCCC-CCCCCceEEEeeE
Q 022543 24 LNLSSSSSLSIFQKPASF-ASFYKSLNPASNSNSFHIHI-ISRSFTSPKAASFSSGTEGSS-PGGGDREILVQHL 95 (295)
Q Consensus 24 l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~-~~~~~~~~e~~~y~~~~~~~~-~~~~~~~~~~~~I 95 (295)
.+.+++.+..+ .+|+.+ +.||+++ ++.+||++||+. .+.+.++|+.++|.++.+.++ +...+.-+|+-.+
T Consensus 18 A~~i~~~l~~g-~~F~~lA~~~S~~~-s~~~gG~lg~~~~~~~l~~~f~~a~~~l~~G~is~pv~t~~G~hIi~v 90 (93)
T 1zk6_A 18 AEEVEKKLKKG-EKFEDLAKEYSTDS-SASKGGDLGWFAKEGQMDETFSKAAFKLKTGEVSDPVKTQYGYHIIKK 90 (93)
T ss_dssp HHHHHHHHHHT-CCHHHHHHHHCCSG-GGGGTTEEEEECTTTSSCTTHHHHHHHSCTTCBCCCEECSSCEEEEEE
T ss_pred HHHHHHHHHCC-CCHHHHHHHhCCCc-hhhhCCeeeeecccccCCHHHHHHHHcCCCCCccceEEECCEEEEEEE
Confidence 45566677666 499999 9999998 789999999999 999999999999999887654 4556666665443
No 92
>1j6y_A Peptidyl-prolyl CIS-trans isomerase; parvulin, PIN1, phosphorylation; NMR {Arabidopsis thaliana} SCOP: d.26.1.1
Probab=97.64 E-value=2.9e-06 Score=66.32 Aligned_cols=79 Identities=9% Similarity=-0.001 Sum_probs=62.1
Q ss_pred hhhccccccccccccCcchhhhccCchhh-hhhccccCCCCCCCccceeecccccCchhhhccccCCCCCCC-CCCCceE
Q 022543 13 LCAITQSLIPTLNLSSSSSLSIFQKPASF-ASFYKSLNPASNSNSFHIHIISRSFTSPKAASFSSGTEGSSP-GGGDREI 90 (295)
Q Consensus 13 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~y~~~~~~~~~-~~~~~~~ 90 (295)
+++.++.....++.+++.+..+..+|+.+ +.||+++ ++.+||+|||+..+.++++|+.++|.++.++++. ...+.-+
T Consensus 54 ~~~~~~~A~~~a~~i~~~l~~G~~~F~~lA~~~S~~~-sa~~GGdLG~~~~~~l~~~f~~a~~~l~~GeiS~pv~t~~G~ 132 (139)
T 1j6y_A 54 LTTTREAAVEQLKSIREDIVSGKANFEEVATRVSDCS-SAKRGGDLGSFGRGQMQKPFEEATYALKVGDISDIVDTDSGV 132 (139)
T ss_dssp SCCCHHHHHHHHHHHHHHHHSSCCCCHHHHHHSSCHH-HHHTCSEEEECSSSSSCTHHHHHHHHCCSSSCCSCEEETTEE
T ss_pred chHHHHHHHHHHHHHHHHHHcCcccHHHHHHHhccCc-hhhcCCeeeeecccccCHHHHHHHHcCCCCCccccEEECCEE
Confidence 34555666677778888887776579999 9999875 6789999999999999999999999998876653 3444444
Q ss_pred EE
Q 022543 91 LV 92 (295)
Q Consensus 91 ~~ 92 (295)
++
T Consensus 133 hI 134 (139)
T 1j6y_A 133 HI 134 (139)
T ss_dssp EC
T ss_pred EE
Confidence 43
No 93
>1yw5_A Peptidyl prolyl CIS/trans isomerase; WW-domain, ppiase domain, ordered linker; 1.60A {Candida albicans}
Probab=97.62 E-value=3.5e-06 Score=68.72 Aligned_cols=78 Identities=10% Similarity=-0.021 Sum_probs=61.5
Q ss_pred cccccccccccCcchhhhccCchhh-hhhccccCCCCCCCccceeecccccCchhhhccccCCCCCC-CCCCCceEEEee
Q 022543 17 TQSLIPTLNLSSSSSLSIFQKPASF-ASFYKSLNPASNSNSFHIHIISRSFTSPKAASFSSGTEGSS-PGGGDREILVQH 94 (295)
Q Consensus 17 ~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~y~~~~~~~~-~~~~~~~~~~~~ 94 (295)
++.....++.+++.+..+..+|+.+ +.||++ .++.+||+|||+..+.++++|+.++|.++.++++ +...+.-+|+-.
T Consensus 96 ~~~A~~~~~~i~~~l~~G~~~F~~lA~~~S~~-~sa~~GGdLG~~~~~~l~~~f~~a~f~L~~GeiS~pv~t~~G~hIik 174 (177)
T 1yw5_A 96 RDESIQILKKHLERILSGEVKLSELANTESDC-SSHDRGGDLGFFSKGQMQPPFEEAAFNLHVGEVSNIIETNSGVHILQ 174 (177)
T ss_dssp HHHHHHHHHHHHHHHHHTSSCHHHHHHHHCCS-GGGGGTTEEEEECTTSSCHHHHHHHHTSCTTCBCCCEEETTEEEEEE
T ss_pred HHHHHHHHHHHHHHHHcCchhHHHHHHHhCCC-cchhcCCccceecccccCHHHHHHHHcCCCCCcCCeEEECCEEEEEE
Confidence 4445555677788887776689999 999988 4789999999999999999999999999887654 445556666544
Q ss_pred E
Q 022543 95 L 95 (295)
Q Consensus 95 I 95 (295)
+
T Consensus 175 v 175 (177)
T 1yw5_A 175 R 175 (177)
T ss_dssp E
T ss_pred E
Confidence 3
No 94
>2kgj_A Peptidyl-prolyl CIS-trans isomerase D; prolyl isomerase, parvulin, cell inner membrane, cell membrane, membrane, rotamase, stress response; NMR {Escherichia coli}
Probab=97.59 E-value=5.2e-06 Score=61.34 Aligned_cols=72 Identities=11% Similarity=-0.091 Sum_probs=56.9
Q ss_pred ccccccCcchhhhccCchhh-hhhccccCCCCCCCccceeecccccCchhhhccccCCCCCC-CCCCCceEEEeeE
Q 022543 22 PTLNLSSSSSLSIFQKPASF-ASFYKSLNPASNSNSFHIHIISRSFTSPKAASFSSGTEGSS-PGGGDREILVQHL 95 (295)
Q Consensus 22 ~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~y~~~~~~~~-~~~~~~~~~~~~I 95 (295)
.+.+++++.+..+ .+|+.+ ++||+|+.++.+||+|||+..+.++++|+.++|. ++++++ +...+.-+++-.+
T Consensus 17 ~~A~~i~~~l~~G-~~F~~lA~~~S~d~~sa~~GGdlG~~~~~~l~~~f~~a~~~-~~GeiS~pv~t~~G~hIikv 90 (102)
T 2kgj_A 17 DEAKAVLDELNKG-GDFAALAKEKSADIISARNGGDMGWLEDATIPDELKNAGLK-EKGQLSGVIKSSVGFLIVRL 90 (102)
T ss_dssp HHHHHHHHHHHHT-SCHHHHHHHTCTTHHHHTTTSEEEEEETTCCCHHHHTTCCC-STTCEEEEEEETTEEEEEEE
T ss_pred HHHHHHHHHHHCC-CCHHHHHHHhCCCchhhhcCCccceecccccCHHHHHHHhc-CCCCccccEEECCEEEEEEE
Confidence 3445666777666 489999 9999999899999999999999999999999999 887654 4455555555444
No 95
>3ui4_A Peptidyl-prolyl CIS-trans isomerase NIMA-interact; peptidyl-prolyl-isomerase; 0.80A {Homo sapiens} SCOP: d.26.1.1 PDB: 3ui5_A 3ui6_A 1fjd_A 1eq3_A
Probab=97.58 E-value=1.2e-05 Score=59.31 Aligned_cols=68 Identities=10% Similarity=-0.008 Sum_probs=52.9
Q ss_pred cccCcchhhhccCchhh-hhhccccCCCCCCCccceeecccccCchhhhccccCCCCCC-------CCCCCceEEEeeE
Q 022543 25 NLSSSSSLSIFQKPASF-ASFYKSLNPASNSNSFHIHIISRSFTSPKAASFSSGTEGSS-------PGGGDREILVQHL 95 (295)
Q Consensus 25 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~y~~~~~~~~-------~~~~~~~~~~~~I 95 (295)
+++.+.+..+ .+|+.+ ++||+|. +.+||+|||+..+.++++|+.++|.++.++++ +...+.-||+-.+
T Consensus 22 ~~i~~~l~~G-~~F~~lA~~~S~d~--a~~GGdlG~~~~~~l~~~f~~a~~~l~~G~vs~~~~~~~pv~t~~G~hIikv 97 (101)
T 3ui4_A 22 MEAMEKLKSG-MRFNEVAAQYSEDK--ARQGGDLGWMTRGSMVGPFQEAAFALPVSGMDKPVFTDPPVKTKFGYHIIMV 97 (101)
T ss_dssp HHHHHHHHTT-CCHHHHHHHHCSSS--GGGTTEEEEEETTSSCHHHHHHHHTSCCCBTTBCCBCSSCEEETTEEEEEEE
T ss_pred HHHHHHHHCC-CCHHHHHHHhCcCc--hhcCCceeeEcCCCCCHHHHHHHHhCCCCCCccCcccCCcEEECCEEEEEEE
Confidence 4455556555 599999 9999984 68999999999999999999999999887765 3445556655443
No 96
>2rqs_A Parvulin-like peptidyl-prolyl isomerase; CIS/trans isomerisation, cenarcheaum symbiosum, low temperat NIMA-kinase, PIN1, cell cycle; NMR {Cenarchaeum symbiosum}
Probab=97.58 E-value=1.2e-05 Score=58.78 Aligned_cols=71 Identities=11% Similarity=-0.048 Sum_probs=57.0
Q ss_pred ccccCcchhhhccCchhh-hhhccccCCCCCCCccceeecccccCchhhhccccCCCCCC-CCCCCceEEEeeE
Q 022543 24 LNLSSSSSLSIFQKPASF-ASFYKSLNPASNSNSFHIHIISRSFTSPKAASFSSGTEGSS-PGGGDREILVQHL 95 (295)
Q Consensus 24 l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~y~~~~~~~~-~~~~~~~~~~~~I 95 (295)
.+++++.+..+ .+|+.+ ++||+|..++.+||++||+..+.+.++|+.++|.++.++++ +...+.-+|+-++
T Consensus 23 A~~i~~~l~~g-~~F~~lA~~~S~d~~s~~~GG~lG~~~~~~l~~~f~~a~~~l~~G~is~pv~t~~G~hIi~v 95 (97)
T 2rqs_A 23 ALAVQERLKAG-EKFGKLAKELSIDGGSAKRDGSLGYFGRGKMVKPFEDAAFRLQVGEVSEPVKSEFGYHVIKR 95 (97)
T ss_dssp HHHHHHHHTTT-CCHHHHHHHTCCCCGGGGGTTEEEEECTTSSCHHHHHHHTTCTTSCBCCCEECSSCEEEEEE
T ss_pred HHHHHHHHHCC-CCHHHHHHHhCCCCcchhcCceeeeEcCCCCCHHHHHHHHcCCCCCccccEEECCEEEEEEE
Confidence 34555666665 489999 99999988999999999999999999999999999887655 4556666665443
No 97
>1jns_A Peptidyl-prolyl CIS-trans isomerase C; alpha-beta sandwich, CIS peptide bond; NMR {Escherichia coli} SCOP: d.26.1.1 PDB: 1jnt_A
Probab=97.54 E-value=1.3e-05 Score=58.04 Aligned_cols=70 Identities=4% Similarity=-0.146 Sum_probs=55.6
Q ss_pred ccccCcchhhhccCchhh-hhhccccCCCCCCCccceeecccccCchhhhccccCCCCCC-CCCCCceEEEeeE
Q 022543 24 LNLSSSSSLSIFQKPASF-ASFYKSLNPASNSNSFHIHIISRSFTSPKAASFSSGTEGSS-PGGGDREILVQHL 95 (295)
Q Consensus 24 l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~y~~~~~~~~-~~~~~~~~~~~~I 95 (295)
.+++++.+..+. +|+.+ +.||+++ ++.+||++||+..+.+.++|+.++|.++.+.++ +...+.-+|+-.+
T Consensus 17 A~~i~~~l~~g~-~F~~lA~~~S~~~-s~~~gGdlg~~~~~~l~~~f~~a~~~l~~G~is~pv~t~~G~hIi~v 88 (92)
T 1jns_A 17 ALDLLEQIKNGA-DFGKLAKKHSICP-SGKRGGDLGEFRQGQMVPAFDKVVFSCPVLEPTGPLHTQFGYHIIKV 88 (92)
T ss_dssp HHHHHHHHHHTC-CHHHHHHHHHCST-TTTTGGGCCEEETTSSCHHHHHHHHHSCTTCCEEEEEETTEEEEEEE
T ss_pred HHHHHHHHHCCC-CHHHHHHHhCCCc-chhcCCeeeEEcCcccCHHHHHHHHhCCCCCcCCcEEECCEEEEEEE
Confidence 455666776664 89999 9999886 788999999999999999999999999887664 4455556665544
No 98
>2f46_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.41A {Neisseria meningitidis Z2491}
Probab=97.09 E-value=0.00058 Score=54.08 Aligned_cols=81 Identities=14% Similarity=0.173 Sum_probs=47.9
Q ss_pred cchhHHHhhhcCCCccccceEEeccChhh------------hhc-cCCCCceecCcccccCCCC----CccccC-CCCCc
Q 022543 187 IQPDELHKKMQDPNFHKEAQLIDVREPEE------------VAL-SSLPGFQVLPLRQFGSWGP----DITVKF-DPQKD 248 (295)
Q Consensus 187 is~~el~~~l~~~~~~~~~~liDvR~~~e------------~~~-ghIpgAinip~~~l~~~~~----~~~~~~-~~~~~ 248 (295)
++.+++..+... .-..+||+|++.| +.. .+|+|.+|+|+.... ... .+...+ ..+.|
T Consensus 30 ~~~~d~~~L~~~----Gi~~IIdlR~~~E~~~~p~~~~~~~~~~~~gi~~~~~iPv~~~~-~~~~~~~~~~~~l~~~~~p 104 (156)
T 2f46_A 30 LTKADAEQIAQL----GIKTIICNRPDREEESQPDFAQIKQWLEQAGVTGFHHQPVTARD-IQKHDVETFRQLIGQAEYP 104 (156)
T ss_dssp CCGGGHHHHHHH----TCCEEEECSCTTSSTTCCCHHHHHHHHGGGTCCEEEECCCCTTT-CCHHHHHHHHHHHHTSCSS
T ss_pred CCHHHHHHHHHC----CCCEEEECCCCccccCCCcHHHHHHHHHHCCCHhheECccCCCC-CCHHHHHHHHHHHHhCCCC
Confidence 345555554432 2247899997765 223 359999999986431 000 011111 24789
Q ss_pred EEEEeCCChhHHHHHHHH-HHcCCC
Q 022543 249 TYVMCHHGMRSLQVAQWL-QTQGFR 272 (295)
Q Consensus 249 iv~~C~~g~rs~~a~~~L-~~~G~~ 272 (295)
|++||.+|.|+..++..+ ...|.+
T Consensus 105 VlvHC~sG~Rs~~l~al~l~~~g~~ 129 (156)
T 2f46_A 105 VLAYCRTGTRCSLLWGFRRAAEGMP 129 (156)
T ss_dssp EEEECSSSHHHHHHHHHHHHHTTCC
T ss_pred EEEECCCCCCHHHHHHHHHHHcCCC
Confidence 999999999987544433 335543
No 99
>3nrk_A LIC12922; NC domain, parvulin domain, SURA homology, probable chaperon unknown function; 3.10A {Leptospira interrogans serovar copenhaorganism_taxid}
Probab=96.62 E-value=0.00014 Score=64.86 Aligned_cols=77 Identities=9% Similarity=-0.077 Sum_probs=61.3
Q ss_pred cccccccccCcc-hhhhccCchhh-hhhccccCCCCCCCccceeeccccc---CchhhhccccCCCCCC-CCCCCc-eEE
Q 022543 19 SLIPTLNLSSSS-SLSIFQKPASF-ASFYKSLNPASNSNSFHIHIISRSF---TSPKAASFSSGTEGSS-PGGGDR-EIL 91 (295)
Q Consensus 19 ~~~~~l~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~---~~~e~~~y~~~~~~~~-~~~~~~-~~~ 91 (295)
.....++.+++. +..+ .+|+.+ +.||.|+.++.+||.+||+..+.++ ++|+.+.|.++.|.++ +...+. .+|
T Consensus 179 ~~~~~a~~i~~~~l~~g-~~F~~lA~~~S~d~~s~~~gG~lg~~~~~~l~~~~~~~~~a~~~l~~Geis~pv~t~~~G~h 257 (325)
T 3nrk_A 179 RLYKEVSEIRKSILADP-SSFALIAGSPRNDPALRARRGMVEWISSFDLYKYSKITATIAAPLPNGGVSEVFRDERKRYC 257 (325)
T ss_dssp HHHHHHHHHHHHHHHCT-THHHHHHHSTTSCHHHHHTTTEEEEEEHHHHHHHCHHHHHHHTTCCTTCBCCCEECTTSCEE
T ss_pred HHHHHHHHHHHHHHhCC-CCHHHHHHHhCCCccccccCCcccccccccccccCHHHHHHHHcCCCCCCCceEEeCCCeEE
Confidence 444556677777 6555 499999 9999999998999999999999999 9999999999888765 445555 666
Q ss_pred EeeEE
Q 022543 92 VQHLL 96 (295)
Q Consensus 92 ~~~Il 96 (295)
+-.+.
T Consensus 258 Iikv~ 262 (325)
T 3nrk_A 258 ILKIE 262 (325)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 65554
No 100
>3rfw_A Cell-binding factor 2; SURA-like, chaperone; 2.20A {Campylobacter jejuni}
Probab=96.30 E-value=0.00071 Score=57.91 Aligned_cols=62 Identities=10% Similarity=-0.087 Sum_probs=52.9
Q ss_pred cCchhh-hhhccccCCCCCCCccceeecccccCchhhhccccCCCCCC--CCCCCceEEEeeEEe
Q 022543 36 QKPASF-ASFYKSLNPASNSNSFHIHIISRSFTSPKAASFSSGTEGSS--PGGGDREILVQHLLV 97 (295)
Q Consensus 36 ~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~y~~~~~~~~--~~~~~~~~~~~~Il~ 97 (295)
.+|+.+ +.||.++.+..+||++||+..+.++++|+.+.|.++.|.++ +...+..+|+-.+.=
T Consensus 143 ~~F~~lA~~~S~~~~~~~~gGdlg~~~~~~l~~~f~~a~~~l~~G~is~~pv~t~~G~hii~v~~ 207 (252)
T 3rfw_A 143 AKFSELAKEKSIDPGSKNQGGELGWFDQSTMVKPFTDAAFALKNGTITTTPVKTNFGYHVILKEN 207 (252)
T ss_dssp HHHHHHHHHHCCCTTTGGGTTEEEEECSSSSCHHHHHHHHHSCTTEECSSCEEETTEEEEEEEEE
T ss_pred ccHHHHHHHhCCCCchhhcCCcccccccccccHHHHHHHHcCCCCCccCceEEECCEEEEEEEEE
Confidence 489999 99999999888999999999999999999999999888765 456666777666543
No 101
>1v8c_A MOAD related protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, protein binding; 1.60A {Thermus thermophilus} SCOP: d.15.3.1 d.129.5.1
Probab=87.83 E-value=0.074 Score=42.43 Aligned_cols=26 Identities=19% Similarity=0.281 Sum_probs=23.1
Q ss_pred ceEEeccChhhhhccCCCCceecCcccccC
Q 022543 205 AQLIDVREPEEVALSSLPGFQVLPLRQFGS 234 (295)
Q Consensus 205 ~~liDvR~~~e~~~ghIpgAinip~~~l~~ 234 (295)
..+||||++.||. |||+|+|...++.
T Consensus 122 ~~liDvRe~~E~~----pgA~~iprg~lE~ 147 (168)
T 1v8c_A 122 GAVVRFREVEPLK----VGSLSIPQLRVEV 147 (168)
T ss_dssp TEEEEEEEEEEEE----ETTEEEEEEEEEE
T ss_pred eEEEECCChhhcC----CCCEEcChhHHHH
Confidence 4899999999999 9999999887654
No 102
>4erc_A Dual specificity protein phosphatase 23; alpha beta, phosphatase(hydrolase), hydrolase; 1.15A {Homo sapiens} PDB: 2img_A
Probab=76.92 E-value=1.7 Score=32.96 Aligned_cols=68 Identities=25% Similarity=0.375 Sum_probs=36.9
Q ss_pred ceEEeccChhhhhccCCCCc--eecCcccccCCCCC-------cc-ccCCCCCcEEEEeCCCh-hHH-HHHHHH-HHcCC
Q 022543 205 AQLIDVREPEEVALSSLPGF--QVLPLRQFGSWGPD-------IT-VKFDPQKDTYVMCHHGM-RSL-QVAQWL-QTQGF 271 (295)
Q Consensus 205 ~~liDvR~~~e~~~ghIpgA--inip~~~l~~~~~~-------~~-~~~~~~~~iv~~C~~g~-rs~-~a~~~L-~~~G~ 271 (295)
..+||+|...+......+|- +++|+.+....... .+ ..+..+.+|+|+|..|. |+. .++..| ...|+
T Consensus 37 ~~Vi~l~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~i~~~~~~~~~vlVHC~~G~~Rsg~~~a~~l~~~~~~ 116 (150)
T 4erc_A 37 RHLVSLTERGPPHSDSCPGLTLHRLRIPDFCPPAPDQIDRFVQIVDEANARGEAVGVHCALGFGRTGTMLACYLVKERGL 116 (150)
T ss_dssp EEEEECSSSCCTTGGGCTTSEEEECCCCTTSCCCHHHHHHHHHHHHHHHHTTCEEEEECSSSSHHHHHHHHHHHHHHHTC
T ss_pred CEEEEcCCCCCCcccccCCceEEEEecCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHcCC
Confidence 47899998765443344443 34555443211100 00 11135689999999885 776 444444 44665
Q ss_pred C
Q 022543 272 R 272 (295)
Q Consensus 272 ~ 272 (295)
+
T Consensus 117 ~ 117 (150)
T 4erc_A 117 A 117 (150)
T ss_dssp C
T ss_pred C
Confidence 3
No 103
>2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual specicity protein phosphatase 23, DUS23_human, malate, structural genomics, PSI; 1.93A {Homo sapiens}
Probab=62.30 E-value=4.6 Score=30.39 Aligned_cols=67 Identities=24% Similarity=0.356 Sum_probs=35.0
Q ss_pred ceEEeccChhhhhccCCCC--ceecCcccccCCCCC----c----cccCCCCCcEEEEeCCCh-hHH-HHHHHHHHc-CC
Q 022543 205 AQLIDVREPEEVALSSLPG--FQVLPLRQFGSWGPD----I----TVKFDPQKDTYVMCHHGM-RSL-QVAQWLQTQ-GF 271 (295)
Q Consensus 205 ~~liDvR~~~e~~~ghIpg--Ainip~~~l~~~~~~----~----~~~~~~~~~iv~~C~~g~-rs~-~a~~~L~~~-G~ 271 (295)
..+||++...++....+++ -+++|+.+....... . ...+..+.+|+|+|..|. |+. .++..|... |.
T Consensus 38 ~~Vv~l~~~~e~~~~~~~~~~~~~~~~~d~~~p~~~~~~~~~~~i~~~~~~~~~vlVHC~aG~~Rsg~~~~~~l~~~~~~ 117 (151)
T 2img_A 38 RHLVSLTERGPPHSDSCPGLTLHRLRIPDFCPPAPDQIDRFVQIVDEANARGEAVGVHCALGFGRTGTMLACYLVKERGL 117 (151)
T ss_dssp EEEEECSSSCCTTGGGCTTSEEEECCCCTTCCCCHHHHHHHHHHHHHHHHTTCEEEEECSSSSSHHHHHHHHHHHHHHCC
T ss_pred CEEEECCCCCCCCHHHHhhCCeEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCcEEEECCCCCChHHHHHHHHHHHHhCc
Confidence 4688998875543333332 345565433211100 0 011135789999999874 765 344444443 65
No 104
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=60.50 E-value=11 Score=31.70 Aligned_cols=30 Identities=23% Similarity=0.369 Sum_probs=24.2
Q ss_pred CcEEEEeCCChh---HHHHHHHHHHcCCCCeEEe
Q 022543 247 KDTYVMCHHGMR---SLQVAQWLQTQGFRRVFNV 277 (295)
Q Consensus 247 ~~iv~~C~~g~r---s~~a~~~L~~~G~~~v~~l 277 (295)
.+|+++|..|+. +..+|++|...||+ |.++
T Consensus 59 ~~v~VlcG~GNNGGDGlv~AR~L~~~G~~-V~v~ 91 (246)
T 1jzt_A 59 KHVFVIAGPGNNGGDGLVCARHLKLFGYN-PVVF 91 (246)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTCC-EEEE
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCCe-EEEE
Confidence 589999997765 56899999999994 7654
No 105
>2jgn_A DBX, DDX3, ATP-dependent RNA helicase DDX3X; phosphorylation, nucleotide-binding, hydrolase, RNA-binding, ATP-binding, DNA-binding, nuclear protein; 1.91A {Homo sapiens}
Probab=59.78 E-value=9.7 Score=30.04 Aligned_cols=39 Identities=13% Similarity=0.211 Sum_probs=29.4
Q ss_pred CCCCcEEEEeCCChhHHHHHHHHHHcCCCCeEEecchHHH
Q 022543 244 DPQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIHA 283 (295)
Q Consensus 244 ~~~~~iv~~C~~g~rs~~a~~~L~~~G~~~v~~l~GG~~~ 283 (295)
.++.+++++|++-..+..++..|...|+ .+..+.|++..
T Consensus 44 ~~~~k~lVF~~~~~~~~~l~~~L~~~g~-~~~~lhg~~~~ 82 (185)
T 2jgn_A 44 GKDSLTLVFVETKKGADSLEDFLYHEGY-ACTSIHGDRSQ 82 (185)
T ss_dssp -CCSCEEEEESCHHHHHHHHHHHHHTTC-CEEEEC-----
T ss_pred CCCCeEEEEECCHHHHHHHHHHHHHcCC-ceEEEeCCCCH
Confidence 4577899999998889999999999998 58889998754
No 106
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=59.19 E-value=11 Score=31.89 Aligned_cols=31 Identities=10% Similarity=0.308 Sum_probs=24.3
Q ss_pred CCcEEEEeCCChh---HHHHHHHHHHcCCCCeEEe
Q 022543 246 QKDTYVMCHHGMR---SLQVAQWLQTQGFRRVFNV 277 (295)
Q Consensus 246 ~~~iv~~C~~g~r---s~~a~~~L~~~G~~~v~~l 277 (295)
..+|+++|..|+. +..+|++|...||+ |.++
T Consensus 85 ~~~vlVlcG~GNNGGDGlv~AR~L~~~G~~-V~v~ 118 (259)
T 3d3k_A 85 RPTVALLCGPHVKGAQGISCGRHLANHDVQ-VILF 118 (259)
T ss_dssp CCEEEEEECSSHHHHHHHHHHHHHHHTTCE-EEEE
T ss_pred CCeEEEEECCCCCHHHHHHHHHHHHHCCCe-EEEE
Confidence 3579999997665 56899999999995 6654
No 107
>2nt2_A Protein phosphatase slingshot homolog 2; alpha/beta hydrolase; 2.10A {Homo sapiens}
Probab=58.83 E-value=8.3 Score=28.94 Aligned_cols=27 Identities=26% Similarity=0.295 Sum_probs=19.0
Q ss_pred CCCcEEEEeCCC-hhHHH-H-HHHHHHcCC
Q 022543 245 PQKDTYVMCHHG-MRSLQ-V-AQWLQTQGF 271 (295)
Q Consensus 245 ~~~~iv~~C~~g-~rs~~-a-~~~L~~~G~ 271 (295)
.+.+|+++|..| .||.. + +..+...|+
T Consensus 80 ~~~~VlVHC~~G~~RS~~~v~ayLm~~~~~ 109 (145)
T 2nt2_A 80 HGSKCLVHSKMGVSRSASTVIAYAMKEYGW 109 (145)
T ss_dssp TTCEEEEECSSSSSHHHHHHHHHHHHHHCC
T ss_pred cCCeEEEECCCCCchHHHHHHHHHHHHhCC
Confidence 578999999998 78753 3 444455665
No 108
>2hjv_A ATP-dependent RNA helicase DBPA; parallel alpha-beta, hydrolase; 1.95A {Bacillus subtilis}
Probab=58.74 E-value=8.6 Score=29.49 Aligned_cols=37 Identities=16% Similarity=0.337 Sum_probs=31.4
Q ss_pred CCCcEEEEeCCChhHHHHHHHHHHcCCCCeEEecchHH
Q 022543 245 PQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIH 282 (295)
Q Consensus 245 ~~~~iv~~C~~g~rs~~a~~~L~~~G~~~v~~l~GG~~ 282 (295)
+..+++++|++-..+..++..|...|+ .+..+.|++.
T Consensus 34 ~~~~~lVF~~~~~~~~~l~~~L~~~~~-~~~~~hg~~~ 70 (163)
T 2hjv_A 34 NPDSCIIFCRTKEHVNQLTDELDDLGY-PCDKIHGGMI 70 (163)
T ss_dssp CCSSEEEECSSHHHHHHHHHHHHHTTC-CEEEECTTSC
T ss_pred CCCcEEEEECCHHHHHHHHHHHHHcCC-cEEEEeCCCC
Confidence 456899999998889999999999998 4888888753
No 109
>2e0t_A Dual specificity phosphatase 26; conserved hypothetical protein, structural genomics, NPPSFA, project on protein structural and functional analyses; 1.67A {Homo sapiens}
Probab=58.29 E-value=10 Score=28.60 Aligned_cols=28 Identities=25% Similarity=0.331 Sum_probs=19.9
Q ss_pred CCCcEEEEeCCC-hhHH-HHHH-HHHHcCCC
Q 022543 245 PQKDTYVMCHHG-MRSL-QVAQ-WLQTQGFR 272 (295)
Q Consensus 245 ~~~~iv~~C~~g-~rs~-~a~~-~L~~~G~~ 272 (295)
.+.+|+++|..| .||. .++. .|...|++
T Consensus 84 ~~~~vlVHC~aG~~RSg~~~~ayl~~~~~~~ 114 (151)
T 2e0t_A 84 PGGKILVHCAVGVSRSATLVLAYLMLYHHLT 114 (151)
T ss_dssp TTCCEEEECSSSSHHHHHHHHHHHHHHSCCC
T ss_pred CCCcEEEECCCCCChHHHHHHHHHHHHcCCC
Confidence 578999999998 7876 4444 44556753
No 110
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=57.42 E-value=12 Score=32.55 Aligned_cols=30 Identities=10% Similarity=0.302 Sum_probs=24.0
Q ss_pred CcEEEEeCCChh---HHHHHHHHHHcCCCCeEEe
Q 022543 247 KDTYVMCHHGMR---SLQVAQWLQTQGFRRVFNV 277 (295)
Q Consensus 247 ~~iv~~C~~g~r---s~~a~~~L~~~G~~~v~~l 277 (295)
.+|+|+|+.|+. +..+|++|...||+ |.++
T Consensus 133 ~~vlVlcG~GNNGGDGlv~AR~L~~~G~~-V~V~ 165 (306)
T 3d3j_A 133 PTVALLCGPHVKGAQGISCGRHLANHDVQ-VILF 165 (306)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTCE-EEEE
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCCc-EEEE
Confidence 579999997664 56899999999994 6654
No 111
>2hcm_A Dual specificity protein phosphatase; structural genomics, PSI, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Mus musculus}
Probab=57.15 E-value=11 Score=28.96 Aligned_cols=28 Identities=29% Similarity=0.471 Sum_probs=19.5
Q ss_pred CCCCcEEEEeCCC-hhHHHH--HHHHHHcCC
Q 022543 244 DPQKDTYVMCHHG-MRSLQV--AQWLQTQGF 271 (295)
Q Consensus 244 ~~~~~iv~~C~~g-~rs~~a--~~~L~~~G~ 271 (295)
..+.+|+|+|..| .||..+ +..+...|+
T Consensus 87 ~~~~~VlVHC~aG~~RSg~~~~ayLm~~~~~ 117 (164)
T 2hcm_A 87 RDGGSCLVYCKNGRSRSAAVCTAYLMRHRGH 117 (164)
T ss_dssp HTTCEEEEEESSSSHHHHHHHHHHHHHHSCC
T ss_pred HcCCEEEEECCCCCchHHHHHHHHHHHHhCC
Confidence 3578999999998 787633 344455665
No 112
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=57.11 E-value=12 Score=31.79 Aligned_cols=31 Identities=23% Similarity=0.342 Sum_probs=24.5
Q ss_pred CCcEEEEeCCChh---HHHHHHHHHHcCCCCeEEe
Q 022543 246 QKDTYVMCHHGMR---SLQVAQWLQTQGFRRVFNV 277 (295)
Q Consensus 246 ~~~iv~~C~~g~r---s~~a~~~L~~~G~~~v~~l 277 (295)
.++|+|+|..|+. +..+|++|...||+ |.++
T Consensus 79 ~~~VlVlcG~GNNGGDGlv~AR~L~~~G~~-V~V~ 112 (265)
T 2o8n_A 79 PPTVLVICGPGNNGGDGLVCARHLKLFGYQ-PTIY 112 (265)
T ss_dssp SCEEEEEECSSHHHHHHHHHHHHHHHTTCE-EEEE
T ss_pred CCeEEEEECCCCCHHHHHHHHHHHHHCCCc-EEEE
Confidence 3589999997665 56899999999994 7654
No 113
>1t5i_A C_terminal domain of A probable ATP-dependent RNA helicase; RECA-like fold, PRE-mRNA processing protein; 1.90A {Homo sapiens} SCOP: c.37.1.19
Probab=55.81 E-value=10 Score=29.46 Aligned_cols=37 Identities=19% Similarity=0.310 Sum_probs=31.5
Q ss_pred CCCcEEEEeCCChhHHHHHHHHHHcCCCCeEEecchHH
Q 022543 245 PQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIH 282 (295)
Q Consensus 245 ~~~~iv~~C~~g~rs~~a~~~L~~~G~~~v~~l~GG~~ 282 (295)
+..+++++|++-..+..++..|...|+ ++..+.|++.
T Consensus 30 ~~~~~lVF~~~~~~~~~l~~~L~~~~~-~~~~~hg~~~ 66 (172)
T 1t5i_A 30 EFNQVVIFVKSVQRCIALAQLLVEQNF-PAIAIHRGMP 66 (172)
T ss_dssp CCSSEEEECSSHHHHHHHHHHHHHTTC-CEEEECTTSC
T ss_pred CCCcEEEEECCHHHHHHHHHHHHhcCC-CEEEEECCCC
Confidence 456899999998889999999999998 4888888753
No 114
>2rb4_A ATP-dependent RNA helicase DDX25; rossmann fold, structural genomics, structural consortium, SGC, alternative initiation, ATP-binding, devel protein; 2.80A {Homo sapiens}
Probab=55.31 E-value=8.9 Score=29.76 Aligned_cols=36 Identities=14% Similarity=0.238 Sum_probs=31.1
Q ss_pred CCCcEEEEeCCChhHHHHHHHHHHcCCCCeEEecchH
Q 022543 245 PQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGI 281 (295)
Q Consensus 245 ~~~~iv~~C~~g~rs~~a~~~L~~~G~~~v~~l~GG~ 281 (295)
+..+++++|++-..+..++..|...|+ .+..+.|++
T Consensus 33 ~~~~~lVF~~~~~~~~~l~~~L~~~~~-~~~~~~g~~ 68 (175)
T 2rb4_A 33 TIGQAIIFCQTRRNAKWLTVEMIQDGH-QVSLLSGEL 68 (175)
T ss_dssp CCSEEEEECSCHHHHHHHHHHHHTTTC-CEEEECSSC
T ss_pred CCCCEEEEECCHHHHHHHHHHHHHcCC-cEEEEeCCC
Confidence 456899999998889999999999998 588888875
No 115
>2r0b_A Serine/threonine/tyrosine-interacting protein; structural genomics, phosphatase, PSI-2, protein structure initiative; 1.60A {Homo sapiens}
Probab=53.76 E-value=11 Score=28.45 Aligned_cols=29 Identities=24% Similarity=0.345 Sum_probs=19.7
Q ss_pred CCCCcEEEEeCCC-hhHHH-HHHHH-HHcCCC
Q 022543 244 DPQKDTYVMCHHG-MRSLQ-VAQWL-QTQGFR 272 (295)
Q Consensus 244 ~~~~~iv~~C~~g-~rs~~-a~~~L-~~~G~~ 272 (295)
..+.+|+++|..| .||.. ++.+| ...|.+
T Consensus 88 ~~~~~vlvHC~aG~~RS~~~~~ayl~~~~~~~ 119 (154)
T 2r0b_A 88 QMGGKVLVHGNAGISRSAAFVIAYIMETFGMK 119 (154)
T ss_dssp HTTCCEEEECSSSSSHHHHHHHHHHHHHHTCC
T ss_pred hcCCCEEEEcCCCCChHHHHHHHHHHHHcCCC
Confidence 3578999999998 68764 33434 446653
No 116
>1zzw_A Dual specificity protein phosphatase 10; MKP, PTP, hydrolase; 1.60A {Homo sapiens}
Probab=53.54 E-value=13 Score=27.92 Aligned_cols=27 Identities=22% Similarity=0.427 Sum_probs=19.0
Q ss_pred CCCcEEEEeCCC-hhHHHH-HHHH-HHcCC
Q 022543 245 PQKDTYVMCHHG-MRSLQV-AQWL-QTQGF 271 (295)
Q Consensus 245 ~~~~iv~~C~~g-~rs~~a-~~~L-~~~G~ 271 (295)
.+.+|+++|..| .||..+ +.+| ...|+
T Consensus 82 ~~~~VlVHC~~G~~RSg~~~~ayl~~~~~~ 111 (149)
T 1zzw_A 82 CGKGLLIHCQAGVSRSATIVIAYLMKHTRM 111 (149)
T ss_dssp TTCEEEEECSSSSSHHHHHHHHHHHHHSCC
T ss_pred cCCeEEEECCCCCCHHHHHHHHHHHHHcCC
Confidence 578999999998 787643 3344 44665
No 117
>1wrm_A Dual specificity phosphatase 22; DSP, JNK, hydrolase; HET: MES; 1.50A {Homo sapiens}
Probab=53.30 E-value=11 Score=28.95 Aligned_cols=28 Identities=21% Similarity=0.417 Sum_probs=19.2
Q ss_pred CCCCcEEEEeCCC-hhHHHH-HHHH-HHcCC
Q 022543 244 DPQKDTYVMCHHG-MRSLQV-AQWL-QTQGF 271 (295)
Q Consensus 244 ~~~~~iv~~C~~g-~rs~~a-~~~L-~~~G~ 271 (295)
..+.+|+|+|..| .||..+ +.+| ...|+
T Consensus 81 ~~~~~VlVHC~aG~~RSg~~~~ayLm~~~~~ 111 (165)
T 1wrm_A 81 LRGESCLVHCLAGVSRSVTLVIAYIMTVTDF 111 (165)
T ss_dssp HTTCEEEEECSSSSSHHHHHHHHHHHHTSSC
T ss_pred HCCCeEEEECCCCCChhHHHHHHHHHHHcCC
Confidence 3578999999988 787653 4444 44554
No 118
>1yz4_A DUSP15, dual specificity phosphatase-like 15 isoform A; hydrolase; HET: BOG; 2.40A {Homo sapiens}
Probab=53.16 E-value=12 Score=28.54 Aligned_cols=28 Identities=21% Similarity=0.348 Sum_probs=19.3
Q ss_pred CCCcEEEEeCCC-hhHHH-HHHH-HHHcCCC
Q 022543 245 PQKDTYVMCHHG-MRSLQ-VAQW-LQTQGFR 272 (295)
Q Consensus 245 ~~~~iv~~C~~g-~rs~~-a~~~-L~~~G~~ 272 (295)
.+.+|+|+|..| .||.. ++.+ +...|++
T Consensus 83 ~~~~VlVHC~aG~~RSg~~~~aylm~~~~~~ 113 (160)
T 1yz4_A 83 NGGNCLVHSFAGISRSTTIVTAYVMTVTGLG 113 (160)
T ss_dssp TTCCEEEEETTSSSHHHHHHHHHHHHHHCCC
T ss_pred cCCeEEEECCCCCchHHHHHHHHHHHHcCCC
Confidence 578999999998 78763 3333 4556653
No 119
>1xri_A AT1G05000; structural genomics, protein structure initiative, CESG for eukaryotic structural genomics, phosphoprote phosphatase; 3.30A {Arabidopsis thaliana} SCOP: c.45.1.1 PDB: 2q47_A
Probab=52.79 E-value=9.5 Score=28.76 Aligned_cols=28 Identities=18% Similarity=0.250 Sum_probs=19.5
Q ss_pred CCCcEEEEeCCCh-hHHH-HHHHHHHcCCC
Q 022543 245 PQKDTYVMCHHGM-RSLQ-VAQWLQTQGFR 272 (295)
Q Consensus 245 ~~~~iv~~C~~g~-rs~~-a~~~L~~~G~~ 272 (295)
.+.+|+++|..|. |+.. ++..|...|++
T Consensus 91 ~~~~vlvHC~aG~~RTg~~~a~~l~~~g~~ 120 (151)
T 1xri_A 91 KNHPVLIHCKRGKHRTGCLVGCLRKLQKWC 120 (151)
T ss_dssp GGCSEEEECSSSSSHHHHHHHHHHHHTTBC
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHHHhCCC
Confidence 5689999999985 7764 44445556753
No 120
>1fuk_A Eukaryotic initiation factor 4A; helicase, DEAD-box protein, translation; 1.75A {Saccharomyces cerevisiae} SCOP: c.37.1.19
Probab=52.20 E-value=13 Score=28.43 Aligned_cols=37 Identities=11% Similarity=0.268 Sum_probs=31.2
Q ss_pred CCCcEEEEeCCChhHHHHHHHHHHcCCCCeEEecchHH
Q 022543 245 PQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIH 282 (295)
Q Consensus 245 ~~~~iv~~C~~g~rs~~a~~~L~~~G~~~v~~l~GG~~ 282 (295)
+..+++++|++-..+..++..|...|+ .+..+.|++.
T Consensus 29 ~~~~~lVF~~~~~~~~~l~~~L~~~~~-~~~~~~~~~~ 65 (165)
T 1fuk_A 29 SVTQAVIFCNTRRKVEELTTKLRNDKF-TVSAIYSDLP 65 (165)
T ss_dssp TCSCEEEEESSHHHHHHHHHHHHHTTC-CEEEECTTSC
T ss_pred CCCCEEEEECCHHHHHHHHHHHHHcCC-CEEEEECCCC
Confidence 456899999998889999999999998 5888888753
No 121
>2esb_A Dual specificity protein phosphatase 18; alpha/beta structure, hydrolase; HET: EPE; 2.00A {Homo sapiens}
Probab=50.88 E-value=15 Score=29.16 Aligned_cols=29 Identities=24% Similarity=0.310 Sum_probs=19.8
Q ss_pred CCCCcEEEEeCCC-hhHHH-H-HHHHHHcCCC
Q 022543 244 DPQKDTYVMCHHG-MRSLQ-V-AQWLQTQGFR 272 (295)
Q Consensus 244 ~~~~~iv~~C~~g-~rs~~-a-~~~L~~~G~~ 272 (295)
..+.+|+|+|..| .||.. + +..+...|++
T Consensus 95 ~~~~~VLVHC~aG~sRS~~vv~ayLm~~~~~s 126 (188)
T 2esb_A 95 MKQGRTLLHCAAGVSRSAALCLAYLMKYHAMS 126 (188)
T ss_dssp HTTCCEEEECSSSSSHHHHHHHHHHHHHSCCC
T ss_pred HcCCEEEEECCCCCchHHHHHHHHHHHHcCCC
Confidence 3578999999998 78763 3 3444556653
No 122
>3rgo_A Protein-tyrosine phosphatase mitochondrial 1; phosphatidylglycerol phosphate (PGP) phosphatase, hydrolase; 1.93A {Mus musculus} PDB: 3rgq_A*
Probab=50.24 E-value=13 Score=27.94 Aligned_cols=29 Identities=31% Similarity=0.531 Sum_probs=19.4
Q ss_pred CCCCcEEEEeCCCh-hHHHH-HHHH-HHcCCC
Q 022543 244 DPQKDTYVMCHHGM-RSLQV-AQWL-QTQGFR 272 (295)
Q Consensus 244 ~~~~~iv~~C~~g~-rs~~a-~~~L-~~~G~~ 272 (295)
..+.+|+|+|..|. ||..+ +.+| ...|++
T Consensus 87 ~~~~~vlVHC~~G~~Rsg~~~~a~l~~~~~~~ 118 (157)
T 3rgo_A 87 ALGQCVYVHCKAGRSRSATMVAAYLIQVHNWS 118 (157)
T ss_dssp HTTCEEEEESSSSSSHHHHHHHHHHHHHHTCC
T ss_pred HCCCEEEEECCCCCChHHHHHHHHHHHHcCCC
Confidence 35689999999887 87643 3444 445653
No 123
>3rgc_A Possible periplasmic protein; ppiase, chaperone; 2.30A {Campylobacter jejuni}
Probab=48.92 E-value=11 Score=31.47 Aligned_cols=46 Identities=9% Similarity=-0.215 Sum_probs=36.8
Q ss_pred CCCccceeecccccCchhhhccccCCCCCC-CCCCCceEEEeeEEec
Q 022543 53 NSNSFHIHIISRSFTSPKAASFSSGTEGSS-PGGGDREILVQHLLVK 98 (295)
Q Consensus 53 ~~~~l~~~~~~~~~~~~e~~~y~~~~~~~~-~~~~~~~~~~~~Il~~ 98 (295)
.+|.+||+..+.+.++|+.+.+.+++|.++ +...+..+|+-.+.=.
T Consensus 160 l~g~lg~~~~~~l~~~~~~a~~~l~~G~is~pv~t~~G~hiikv~~~ 206 (252)
T 3rgc_A 160 LKPQNASLNTSNADPRLLGLLSQIPVGSFSPVLNGKNGYELYEVKSK 206 (252)
T ss_dssp SCCEEEEEETTTSCHHHHHHHHHSCTTCBCCCBTTTTCEEEEEEEEC
T ss_pred cccccceecHHhcCHHHHHHHHcCCCCCcCCcEEeCCeEEEEEEecc
Confidence 578999999999999999999999887654 5567777777666543
No 124
>1rxd_A Protein tyrosine phosphatase type IVA, member 1; protein tyrosine phosphatase IVA1...; structural genomics, NYSGXRC, unknown function, PSI; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1xm2_A 1zck_A 1r6h_A 1v3a_A
Probab=47.65 E-value=18 Score=27.11 Aligned_cols=28 Identities=32% Similarity=0.312 Sum_probs=18.9
Q ss_pred CCCCcEEEEeCCC-hhHH-HHHHHHHHcCC
Q 022543 244 DPQKDTYVMCHHG-MRSL-QVAQWLQTQGF 271 (295)
Q Consensus 244 ~~~~~iv~~C~~g-~rs~-~a~~~L~~~G~ 271 (295)
.++.+|+|+|..| .|+. .++..|...|.
T Consensus 94 ~~~~~vlVHC~aG~~Rtg~~~a~~l~~~~~ 123 (159)
T 1rxd_A 94 EPGCCIAVHCVAGLGRAPVLVALALIEGGM 123 (159)
T ss_dssp STTCEEEEECSSSSTTHHHHHHHHHHHTTC
T ss_pred CCCCeEEEECCCCCCHHHHHHHHHHHHhCC
Confidence 3568999999987 5765 44455544554
No 125
>2hxp_A Dual specificity protein phosphatase 9; human phosphatase, structural genomics, PSI-2, protein structure initiative; 1.83A {Homo sapiens} PDB: 3lj8_A 1mkp_A
Probab=46.95 E-value=17 Score=27.70 Aligned_cols=27 Identities=22% Similarity=0.261 Sum_probs=18.7
Q ss_pred CCCcEEEEeCCC-hhHHH-HHHHH-HHcCC
Q 022543 245 PQKDTYVMCHHG-MRSLQ-VAQWL-QTQGF 271 (295)
Q Consensus 245 ~~~~iv~~C~~g-~rs~~-a~~~L-~~~G~ 271 (295)
.+.+|+|+|..| .||.. ++.+| ...|+
T Consensus 84 ~~~~VlVHC~~G~~RS~~vv~ayLm~~~~~ 113 (155)
T 2hxp_A 84 QNCGVLVHSLAGVSRSVTVTVAYLMQKLHL 113 (155)
T ss_dssp TTCEEEEECSSSSSHHHHHHHHHHHHHHTC
T ss_pred cCCcEEEECCCCCchhHHHHHHHHHHHcCC
Confidence 578999999998 78763 33444 44565
No 126
>3eaq_A Heat resistant RNA dependent ATPase; DEAD box RNA helicase, dimer, ATP-binding, helicase, hydrolase, nucleotide-binding; 2.30A {Thermus thermophilus} PDB: 3ear_A 3eas_A
Probab=45.89 E-value=15 Score=29.58 Aligned_cols=37 Identities=16% Similarity=0.210 Sum_probs=31.3
Q ss_pred CCCcEEEEeCCChhHHHHHHHHHHcCCCCeEEecchHH
Q 022543 245 PQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIH 282 (295)
Q Consensus 245 ~~~~iv~~C~~g~rs~~a~~~L~~~G~~~v~~l~GG~~ 282 (295)
++.+++++|++-..+..++..|...|+ .+..+.|++.
T Consensus 30 ~~~~~lVF~~~~~~~~~l~~~L~~~~~-~~~~lhg~~~ 66 (212)
T 3eaq_A 30 SPDRAMVFTRTKAETEEIAQGLLRLGH-PAQALHGDLS 66 (212)
T ss_dssp CCSCEEEECSSHHHHHHHHHHHHHHTC-CEEEECSSSC
T ss_pred CCCeEEEEeCCHHHHHHHHHHHHHcCC-CEEEEECCCC
Confidence 467899999998888899999999998 4888888753
No 127
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=45.09 E-value=33 Score=24.54 Aligned_cols=26 Identities=27% Similarity=0.378 Sum_probs=18.1
Q ss_pred CcEEEEeCCChhHHHHHH-H----HHHcCCC
Q 022543 247 KDTYVMCHHGMRSLQVAQ-W----LQTQGFR 272 (295)
Q Consensus 247 ~~iv~~C~~g~rs~~a~~-~----L~~~G~~ 272 (295)
+.|+++|.+|..+...+. . +.+.|++
T Consensus 19 ~kIlvvC~sG~gTS~m~~~kl~~~~~~~gi~ 49 (110)
T 3czc_A 19 VKVLTACGNGMGSSMVIKMKVENALRQLGVS 49 (110)
T ss_dssp EEEEEECCCCHHHHHHHHHHHHHHHHHTTCC
T ss_pred cEEEEECCCcHHHHHHHHHHHHHHHHHcCCC
Confidence 569999999976654444 4 4557875
No 128
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=44.71 E-value=17 Score=26.25 Aligned_cols=33 Identities=24% Similarity=0.286 Sum_probs=24.4
Q ss_pred CCCcEEEEeCCChhHHHHHHHHHH----cCCCCeEEec
Q 022543 245 PQKDTYVMCHHGMRSLQVAQWLQT----QGFRRVFNVS 278 (295)
Q Consensus 245 ~~~~iv~~C~~g~rs~~a~~~L~~----~G~~~v~~l~ 278 (295)
+...|++.|.+|..+...+..+++ .|++ +.+..
T Consensus 5 ~~mkIlL~C~aGmSTsllv~km~~~a~~~gi~-v~i~a 41 (108)
T 3nbm_A 5 KELKVLVLCAGSGTSAQLANAINEGANLTEVR-VIANS 41 (108)
T ss_dssp CCEEEEEEESSSSHHHHHHHHHHHHHHHHTCS-EEEEE
T ss_pred cCceEEEECCCCCCHHHHHHHHHHHHHHCCCc-eEEEE
Confidence 455799999999998888888764 5764 55433
No 129
>3ohg_A Uncharacterized protein from DUF2233 family; structural genomics, unknown function, joint center for STRU genomics, JCSG; HET: MSE; 1.80A {Bacteroides ovatus}
Probab=43.91 E-value=20 Score=30.73 Aligned_cols=26 Identities=23% Similarity=0.422 Sum_probs=22.8
Q ss_pred ChhHHHHHHHHHHcCCCCeEEecchH
Q 022543 256 GMRSLQVAQWLQTQGFRRVFNVSGGI 281 (295)
Q Consensus 256 g~rs~~a~~~L~~~G~~~v~~l~GG~ 281 (295)
|..-..++..|+++|..+..+||||-
T Consensus 218 G~tl~ela~~~~~lG~~~AlnLDGGg 243 (285)
T 3ohg_A 218 GLTLPHLATMMKAVGCYNAINLDGGG 243 (285)
T ss_dssp CBCHHHHHHHHHHHTCSEEEECCCGG
T ss_pred CCCHHHHHHHHHHcCCCeEEECCCCc
Confidence 45678999999999999999999974
No 130
>2wgp_A Dual specificity protein phosphatase 14; MKP6, DUSP14, hydrolase, dual specifici phosphatase; 1.88A {Homo sapiens}
Probab=43.50 E-value=19 Score=28.46 Aligned_cols=27 Identities=26% Similarity=0.370 Sum_probs=19.0
Q ss_pred CCCcEEEEeCCC-hhHH-H-HHHHHHHcCC
Q 022543 245 PQKDTYVMCHHG-MRSL-Q-VAQWLQTQGF 271 (295)
Q Consensus 245 ~~~~iv~~C~~g-~rs~-~-a~~~L~~~G~ 271 (295)
.+.+|+|+|..| .||. . ++..+...|+
T Consensus 102 ~~~~VlVHC~aG~~RSgtvv~ayLm~~~~~ 131 (190)
T 2wgp_A 102 KHGATLVHCAAGVSRSATLCIAYLMKFHNV 131 (190)
T ss_dssp TTCCEEEECSSSSSHHHHHHHHHHHHHHCC
T ss_pred cCCCEEEECCCCCCHHHHHHHHHHHHHcCC
Confidence 578999999988 7876 3 3444555665
No 131
>2oud_A Dual specificity protein phosphatase 10; A central five-stranded B-sheet, hydrolase; 2.80A {Homo sapiens}
Probab=43.38 E-value=20 Score=27.96 Aligned_cols=27 Identities=26% Similarity=0.431 Sum_probs=18.7
Q ss_pred CCCcEEEEeCCC-hhHHH-HHHHH-HHcCC
Q 022543 245 PQKDTYVMCHHG-MRSLQ-VAQWL-QTQGF 271 (295)
Q Consensus 245 ~~~~iv~~C~~g-~rs~~-a~~~L-~~~G~ 271 (295)
.+.+|+++|..| .||.. ++.+| ...|+
T Consensus 86 ~~~~VlVHC~aG~~RSg~~v~ayLm~~~~~ 115 (177)
T 2oud_A 86 CGKGLLIHCQAGVSRSATIVIAYLMKHTRM 115 (177)
T ss_dssp TTCEEEEECSSSSSHHHHHHHHHHHHTSCC
T ss_pred cCCcEEEEcCCCCCchHHHHHHHHHHHcCC
Confidence 578999999988 78764 33344 44565
No 132
>2y96_A Dual specificity phosphatase DUPD1; hydrolase; 2.38A {Homo sapiens}
Probab=41.82 E-value=25 Score=28.68 Aligned_cols=28 Identities=25% Similarity=0.376 Sum_probs=19.3
Q ss_pred CCCCcEEEEeCCC-hhHHH-HHH-HHHHcCC
Q 022543 244 DPQKDTYVMCHHG-MRSLQ-VAQ-WLQTQGF 271 (295)
Q Consensus 244 ~~~~~iv~~C~~g-~rs~~-a~~-~L~~~G~ 271 (295)
..+.+|+|+|..| .||.. ++. .|...|+
T Consensus 137 ~~~~~VLVHC~aG~sRS~tvv~aYLm~~~~~ 167 (219)
T 2y96_A 137 DDHSKILVHCVMGRSRSATLVLAYLMIHKDM 167 (219)
T ss_dssp STTCCEEEECSSSSSHHHHHHHHHHHHHSCC
T ss_pred ccCCeEEEECCCCCCHHHHHHHHHHHHHcCC
Confidence 4578999999988 67763 344 4455665
No 133
>2pq5_A Dual specificity protein phosphatase 13; hydrolase, dual specificity phosphatase, DUSP13, testis and skeletal muscle specific DSP; 2.30A {Homo sapiens} PDB: 2gwo_A
Probab=40.52 E-value=26 Score=28.11 Aligned_cols=27 Identities=30% Similarity=0.417 Sum_probs=18.8
Q ss_pred CCCcEEEEeCCC-hhHH-HHHH-HHHHcCC
Q 022543 245 PQKDTYVMCHHG-MRSL-QVAQ-WLQTQGF 271 (295)
Q Consensus 245 ~~~~iv~~C~~g-~rs~-~a~~-~L~~~G~ 271 (295)
.+.+|+|+|..| .||. .++. .+...|+
T Consensus 130 ~~~~VLVHC~aG~sRS~tvv~aYLm~~~~~ 159 (205)
T 2pq5_A 130 PQGRVLVHCAMGVSRSATLVLAFLMIYENM 159 (205)
T ss_dssp TTCCEEEECSSSSSHHHHHHHHHHHHHSCC
T ss_pred CCCeEEEECCCCCcHHHHHHHHHHHHHcCC
Confidence 578999999988 7876 3344 4455665
No 134
>3f81_A Dual specificity protein phosphatase 3; hydrolase, protein dual-specificity phosphatase, inhibitor; HET: STT; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1vhr_A* 1j4x_A*
Probab=40.13 E-value=24 Score=27.46 Aligned_cols=27 Identities=30% Similarity=0.459 Sum_probs=18.8
Q ss_pred CCcEEEEeCCCh-hHHH-HHHHH-HHcCCC
Q 022543 246 QKDTYVMCHHGM-RSLQ-VAQWL-QTQGFR 272 (295)
Q Consensus 246 ~~~iv~~C~~g~-rs~~-a~~~L-~~~G~~ 272 (295)
+.+|+|+|..|. ||.. ++.+| ...|++
T Consensus 115 ~~~VlVHC~~G~~RSg~~v~ayLm~~~~~~ 144 (183)
T 3f81_A 115 NGRVLVHCREGYSRSPTLVIAYLMMRQKMD 144 (183)
T ss_dssp TCCEEEECSSSSSHHHHHHHHHHHHHHCCC
T ss_pred CCeEEEECCCCcchHHHHHHHHHHHHhCCC
Confidence 789999999884 7764 44444 456653
No 135
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=39.70 E-value=11 Score=27.14 Aligned_cols=28 Identities=14% Similarity=0.392 Sum_probs=19.6
Q ss_pred CCCcEEEEeCCChhHHHHHHHHH----HcCCC
Q 022543 245 PQKDTYVMCHHGMRSLQVAQWLQ----TQGFR 272 (295)
Q Consensus 245 ~~~~iv~~C~~g~rs~~a~~~L~----~~G~~ 272 (295)
+...|++.|.+|..+..++..|+ +.|++
T Consensus 3 ~~mkIlvvC~~G~~TSll~~kl~~~~~~~gi~ 34 (109)
T 2l2q_A 3 GSMNILLVCGAGMSTSMLVQRIEKYAKSKNIN 34 (109)
T ss_dssp CCEEEEEESSSSCSSCHHHHHHHHHHHHHTCS
T ss_pred CceEEEEECCChHhHHHHHHHHHHHHHHCCCC
Confidence 34469999999977656666664 46774
No 136
>3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase, nucleus; 2.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1m3g_A
Probab=39.53 E-value=27 Score=25.91 Aligned_cols=27 Identities=19% Similarity=0.235 Sum_probs=18.4
Q ss_pred CCCcEEEEeCCCh-hHH-HHHHHH-HHcCC
Q 022543 245 PQKDTYVMCHHGM-RSL-QVAQWL-QTQGF 271 (295)
Q Consensus 245 ~~~~iv~~C~~g~-rs~-~a~~~L-~~~G~ 271 (295)
.+.+|+|+|..|. ||. .++.+| ...|+
T Consensus 80 ~~~~VlVHC~~G~~RS~~~~~aylm~~~~~ 109 (144)
T 3ezz_A 80 CRGRVLVHSQAGISRSATICLAYLMMKKRV 109 (144)
T ss_dssp TTCCEEEEESSSSSHHHHHHHHHHHHHHTC
T ss_pred cCCeEEEECCCCCChhHHHHHHHHHHHcCC
Confidence 5689999999884 765 444444 44665
No 137
>2g6z_A Dual specificity protein phosphatase 5; alpha/beta, hydrolase; 2.70A {Homo sapiens}
Probab=38.51 E-value=27 Score=28.40 Aligned_cols=28 Identities=25% Similarity=0.335 Sum_probs=19.0
Q ss_pred CCCCcEEEEeCCC-hhHHH--HHHHHHHcCC
Q 022543 244 DPQKDTYVMCHHG-MRSLQ--VAQWLQTQGF 271 (295)
Q Consensus 244 ~~~~~iv~~C~~g-~rs~~--a~~~L~~~G~ 271 (295)
..+.+|+|+|..| .||.. ++..+...|+
T Consensus 81 ~~~~~VLVHC~aG~sRSgtvv~AYLm~~~g~ 111 (211)
T 2g6z_A 81 EKGGKVLVHSEAGISRSPTICMAYLMKTKQF 111 (211)
T ss_dssp HTTCCEEEEESSSSSHHHHHHHHHHHHHHCC
T ss_pred hcCCeEEEECCCCCCcHHHHHHHHHHHHcCC
Confidence 3578999999988 68753 3444444554
No 138
>3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine phosphatase, hydrolase; 1.26A {Homo sapiens}
Probab=38.10 E-value=28 Score=25.85 Aligned_cols=29 Identities=17% Similarity=0.222 Sum_probs=18.8
Q ss_pred CCCCcEEEEeCCCh-hHH-HHHHHH-HHcCCC
Q 022543 244 DPQKDTYVMCHHGM-RSL-QVAQWL-QTQGFR 272 (295)
Q Consensus 244 ~~~~~iv~~C~~g~-rs~-~a~~~L-~~~G~~ 272 (295)
..+.+|+|+|..|. ||. .++.+| ...|++
T Consensus 79 ~~~~~VlVHC~~G~sRS~~~v~ayLm~~~~~~ 110 (144)
T 3s4e_A 79 RKDGVVLVHSNAGVSRAAAIVIGFLMNSEQTS 110 (144)
T ss_dssp HTTCCEEEECSSSSSHHHHHHHHHHHHHHCCC
T ss_pred HcCCeEEEEcCCCCchHHHHHHHHHHHHcCCC
Confidence 35689999999885 764 334444 446653
No 139
>2p6n_A ATP-dependent RNA helicase DDX41; DEAD, structural genomics, structural genomic consortium, SGC, hydrolase; 2.60A {Homo sapiens}
Probab=38.05 E-value=24 Score=27.91 Aligned_cols=35 Identities=11% Similarity=0.279 Sum_probs=29.9
Q ss_pred CCcEEEEeCCChhHHHHHHHHHHcCCCCeEEecchH
Q 022543 246 QKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGI 281 (295)
Q Consensus 246 ~~~iv~~C~~g~rs~~a~~~L~~~G~~~v~~l~GG~ 281 (295)
..+++++|++-..+..++..|...|+ ++..+.|++
T Consensus 54 ~~~~lVF~~~~~~~~~l~~~L~~~g~-~~~~lhg~~ 88 (191)
T 2p6n_A 54 PPPVLIFAEKKADVDAIHEYLLLKGV-EAVAIHGGK 88 (191)
T ss_dssp CSCEEEECSCHHHHHHHHHHHHHHTC-CEEEECTTS
T ss_pred CCCEEEEECCHHHHHHHHHHHHHcCC-cEEEEeCCC
Confidence 34799999998889999999999998 477888875
No 140
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=37.27 E-value=40 Score=24.84 Aligned_cols=30 Identities=7% Similarity=0.046 Sum_probs=24.6
Q ss_pred EEEEeCCChhHHHHHHHHHHcCCCCeEEecc
Q 022543 249 TYVMCHHGMRSLQVAQWLQTQGFRRVFNVSG 279 (295)
Q Consensus 249 iv~~C~~g~rs~~a~~~L~~~G~~~v~~l~G 279 (295)
-|++|+.|..+..++..|...|+ +|.+++-
T Consensus 9 ~viIiG~G~~G~~la~~L~~~g~-~v~vid~ 38 (140)
T 3fwz_A 9 HALLVGYGRVGSLLGEKLLASDI-PLVVIET 38 (140)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTC-CEEEEES
T ss_pred CEEEECcCHHHHHHHHHHHHCCC-CEEEEEC
Confidence 47788889899999999999998 4777764
No 141
>3cm3_A Late protein H1, dual specificity protein phosphatase; dual-specificity phosphatase, VH1, hydrolase; 1.32A {Vaccinia virus} PDB: 2rf6_A 2p4d_A
Probab=36.76 E-value=31 Score=26.69 Aligned_cols=28 Identities=18% Similarity=0.097 Sum_probs=18.6
Q ss_pred CCCcEEEEeCCC-hhHHH--HHHHHHHcCCC
Q 022543 245 PQKDTYVMCHHG-MRSLQ--VAQWLQTQGFR 272 (295)
Q Consensus 245 ~~~~iv~~C~~g-~rs~~--a~~~L~~~G~~ 272 (295)
.+.+|+|+|..| .||.. ++..+...|+.
T Consensus 107 ~~~~VlVHC~aG~~RSg~~v~aylm~~~~~~ 137 (176)
T 3cm3_A 107 RNEPVLVHSAAGVNRSGAMILAYLMSKNKES 137 (176)
T ss_dssp HTCCEEEECSSSSSHHHHHHHHHHHHHCCSS
T ss_pred CCCcEEEECCcCCCHHHHHHHHHHHHHhCCC
Confidence 468999999988 67653 33344455654
No 142
>3rof_A Low molecular weight protein-tyrosine-phosphatase; phosphatase, hydrolase; 1.03A {Staphylococcus aureus}
Probab=35.58 E-value=26 Score=27.05 Aligned_cols=39 Identities=15% Similarity=0.180 Sum_probs=29.7
Q ss_pred CcEEEEeCC-ChhHHHHHHHHHH----cCCCCeEEecchHHHcc
Q 022543 247 KDTYVMCHH-GMRSLQVAQWLQT----QGFRRVFNVSGGIHAYA 285 (295)
Q Consensus 247 ~~iv~~C~~-g~rs~~a~~~L~~----~G~~~v~~l~GG~~~W~ 285 (295)
..|+|+|.+ -.||..|...|+. .|..++.+...|...|.
T Consensus 7 ~~vLFVC~gN~cRSpmAE~i~~~~~~~~gl~~~~v~SAGt~~~~ 50 (158)
T 3rof_A 7 VDVAFVCLGNICRSPMAEAIMRQRLKDRNIHDIKVHSRGTGSWN 50 (158)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHHHHTTCCSEEEEEEETTCCS
T ss_pred CEEEEEeCCchhHHHHHHHHHHHHHHHcCCCCeEEEecccCCcc
Confidence 468999985 4688888777765 46666778888999884
No 143
>3emu_A Leucine rich repeat and phosphatase domain containing protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.30A {Entamoeba histolytica}
Probab=34.77 E-value=39 Score=25.79 Aligned_cols=28 Identities=14% Similarity=0.227 Sum_probs=18.5
Q ss_pred CCCcEEEEeCCCh-hHH-HH-HHHHHHcCCC
Q 022543 245 PQKDTYVMCHHGM-RSL-QV-AQWLQTQGFR 272 (295)
Q Consensus 245 ~~~~iv~~C~~g~-rs~-~a-~~~L~~~G~~ 272 (295)
.+.+|+|+|..|. ||. .+ +..+...|++
T Consensus 86 ~~~~VlVHC~~G~sRS~~vv~ayLm~~~~~s 116 (161)
T 3emu_A 86 RKEGVLIISGTGVNKAPAIVIAFLMYYQRLS 116 (161)
T ss_dssp TTCEEEEEESSSSSHHHHHHHHHHHHHTTCC
T ss_pred cCCeEEEEcCCCCcHHHHHHHHHHHHHhCCC
Confidence 5689999999884 764 33 3444556653
No 144
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=34.73 E-value=63 Score=23.87 Aligned_cols=42 Identities=14% Similarity=0.226 Sum_probs=31.4
Q ss_pred CCCCcEEEEeCCChhHHHHHHHHHHcCCCCeEEecchHHHcc
Q 022543 244 DPQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIHAYA 285 (295)
Q Consensus 244 ~~~~~iv~~C~~g~rs~~a~~~L~~~G~~~v~~l~GG~~~W~ 285 (295)
+++-.|.++.+...........|...||..|..-..|..+|.
T Consensus 10 ~k~~rILiVDD~~~~r~~l~~~L~~~G~~~v~~a~~g~~al~ 51 (134)
T 3to5_A 10 NKNMKILIVDDFSTMRRIVKNLLRDLGFNNTQEADDGLTALP 51 (134)
T ss_dssp CTTCCEEEECSCHHHHHHHHHHHHHTTCCCEEEESSHHHHHH
T ss_pred CCCCEEEEEeCCHHHHHHHHHHHHHcCCcEEEEECCHHHHHH
Confidence 455567888777666667888899999977776777777764
No 145
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=34.31 E-value=21 Score=25.56 Aligned_cols=30 Identities=17% Similarity=0.237 Sum_probs=21.1
Q ss_pred CcEEEEeCCChhHHHHHHHHH----HcCCCCeEEe
Q 022543 247 KDTYVMCHHGMRSLQVAQWLQ----TQGFRRVFNV 277 (295)
Q Consensus 247 ~~iv~~C~~g~rs~~a~~~L~----~~G~~~v~~l 277 (295)
+.|++.|.+|..+..++..++ +.|++ +.+-
T Consensus 4 kkIll~Cg~G~sTS~l~~k~~~~~~~~gi~-~~i~ 37 (106)
T 1e2b_A 4 KHIYLFSSAGMSTSLLVSKMRAQAEKYEVP-VIIE 37 (106)
T ss_dssp EEEEEECSSSTTTHHHHHHHHHHHHHSCCS-EEEE
T ss_pred cEEEEECCCchhHHHHHHHHHHHHHHCCCC-eEEE
Confidence 469999999988777666654 46874 4433
No 146
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=34.04 E-value=31 Score=32.13 Aligned_cols=32 Identities=25% Similarity=0.214 Sum_probs=24.6
Q ss_pred CCCcEEEEeCCChh---HHHHHHHHHHcCCCCeEEe
Q 022543 245 PQKDTYVMCHHGMR---SLQVAQWLQTQGFRRVFNV 277 (295)
Q Consensus 245 ~~~~iv~~C~~g~r---s~~a~~~L~~~G~~~v~~l 277 (295)
+.++|+++|..|+. +..++++|...||+ |.++
T Consensus 51 ~~~~v~VlcG~GNNGGDGlv~AR~L~~~G~~-V~v~ 85 (502)
T 3rss_A 51 SDYRFLVLCGGGNNGGDGFVVARNLLGVVKD-VLVV 85 (502)
T ss_dssp TTCEEEEEECSSHHHHHHHHHHHHHTTTSSE-EEEE
T ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHCCCe-EEEE
Confidence 35789999997765 56889999999984 6644
No 147
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=34.03 E-value=36 Score=24.53 Aligned_cols=27 Identities=11% Similarity=0.287 Sum_probs=19.0
Q ss_pred CCcEEEEeCCChhHHH-HHHHHH----HcCCC
Q 022543 246 QKDTYVMCHHGMRSLQ-VAQWLQ----TQGFR 272 (295)
Q Consensus 246 ~~~iv~~C~~g~rs~~-a~~~L~----~~G~~ 272 (295)
-+.|+++|.+|..+.. ++..|+ +.|++
T Consensus 21 ~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~ 52 (113)
T 1tvm_A 21 KRKIIVACGGAVATSTMAAEEIKELCQSHNIP 52 (113)
T ss_dssp SEEEEEESCSCSSHHHHHHHHHHHHHHHTTCC
T ss_pred ccEEEEECCCCHHHHHHHHHHHHHHHHHcCCe
Confidence 3579999999977654 565554 46775
No 148
>4h3k_B RNA polymerase II subunit A C-terminal domain PHO SSU72; heat repeat, phosphatase, RNA polymerase II, hydrolase; HET: SEP; 2.00A {Homo sapiens} PDB: 3o2q_B* 4h3h_B* 3o2s_B
Probab=33.57 E-value=46 Score=26.97 Aligned_cols=29 Identities=24% Similarity=0.335 Sum_probs=24.3
Q ss_pred cEEEEeCC-ChhHHHHHHHHHHcCCCCeEEe
Q 022543 248 DTYVMCHH-GMRSLQVAQWLQTQGFRRVFNV 277 (295)
Q Consensus 248 ~iv~~C~~-g~rs~~a~~~L~~~G~~~v~~l 277 (295)
.+-++|.+ .+||-.|-..|.+.|| +|..+
T Consensus 27 r~avVCaSN~NRSMEAH~~L~k~Gf-~V~Sf 56 (214)
T 4h3k_B 27 RVAVVSSSNQNRSMEAHNILSKRGF-SVRSF 56 (214)
T ss_dssp EEEEEESSSSSHHHHHHHHHHHTTC-EEEEE
T ss_pred eEEEECCCCcchhHHHHHHHHHCCC-ceEee
Confidence 47788985 5899999999999999 57765
No 149
>2j16_A SDP-1, tyrosine-protein phosphatase YIL113W; hydrolase, hypothetical protein; 2.7A {Saccharomyces cerevisiae} PDB: 2j17_A* 2j16_B
Probab=33.32 E-value=43 Score=26.40 Aligned_cols=28 Identities=14% Similarity=0.277 Sum_probs=18.8
Q ss_pred CCCCcEEEEeCCC-hhHHH--HHHHHHHcCC
Q 022543 244 DPQKDTYVMCHHG-MRSLQ--VAQWLQTQGF 271 (295)
Q Consensus 244 ~~~~~iv~~C~~g-~rs~~--a~~~L~~~G~ 271 (295)
..+.+|+|+|..| .||.. +|..+...|+
T Consensus 115 ~~g~~VLVHC~~G~sRS~tvv~ayLm~~~~~ 145 (182)
T 2j16_A 115 TKREKILIHAQCGLSRSATLIIAYIMKYHNL 145 (182)
T ss_dssp HTTCCEEEEESSCCSHHHHHHHHHHHHHTTC
T ss_pred hcCCeEEEECCCCCChHHHHHHHHHHHHcCC
Confidence 3678999999988 67653 3444455565
No 150
>3s4o_A Protein tyrosine phosphatase-like protein; structural genomics, medical structural genomics of pathogen protozoa, MSGPP, unknown function; HET: MSE EPE; 2.30A {Leishmania major}
Probab=33.16 E-value=44 Score=25.09 Aligned_cols=28 Identities=29% Similarity=0.235 Sum_probs=18.7
Q ss_pred CCCcEEEEeCCC-hhHH-HHHHHHHHc-CCC
Q 022543 245 PQKDTYVMCHHG-MRSL-QVAQWLQTQ-GFR 272 (295)
Q Consensus 245 ~~~~iv~~C~~g-~rs~-~a~~~L~~~-G~~ 272 (295)
++.+|+|+|..| .|+. .++..|... |.+
T Consensus 108 ~~~~vlVHC~aG~~RTg~~~a~~L~~~~~~~ 138 (167)
T 3s4o_A 108 PPPTIGVHCVAGLGRAPILVALALVEYGNVS 138 (167)
T ss_dssp CCCEEEEECSSSSSHHHHHHHHHHHHTTCCC
T ss_pred CCCcEEEECCCCCCHHHHHHHHHHHHhCCCC
Confidence 478999999987 4654 455555554 653
No 151
>1u14_A Hypothetical UPF0244 protein YJJX; structural genomics, protein structure initiative, PSI, midwest center for structural genomics, MCSG; 1.68A {Salmonella typhimurium} SCOP: c.51.4.3 PDB: 1u5w_A
Probab=32.10 E-value=32 Score=27.13 Aligned_cols=40 Identities=23% Similarity=0.305 Sum_probs=34.4
Q ss_pred HHHHHhCCCCcHHHHHHHhCCCC-CccCCCcccceeCCCCc
Q 022543 107 ELQRRVSQGKDLSDLAVEHSICP-SKGEGGMLGWVRKGQLV 146 (295)
Q Consensus 107 ~i~~~i~~g~~F~~~a~~~S~d~-~~~~gG~lg~~~~~~~~ 146 (295)
.+.+.|++|....++..++.... .+.++|.+|.++.+.+.
T Consensus 110 ~v~~~i~~G~ELG~vmd~~~~~~~i~~~~GaIG~lT~g~~~ 150 (172)
T 1u14_A 110 VILDRVRQGEALGPVMSQYTGIDEIGRKEGAIGVFTAGKLT 150 (172)
T ss_dssp HHHHHHTTTCCHHHHHHHHHCCTTGGGTTHHHHHHTTTSSC
T ss_pred HHHHHHHcCCCHHHHHHHHhCCCccCccCchHhhhcCCcee
Confidence 46777889999999999987766 89999999999998875
No 152
>2yjt_D ATP-dependent RNA helicase SRMB, regulator of ribonuclease activity A; hydrolase inhibitor-hydrolase complex, DEAD box RNA helicase; 2.90A {Escherichia coli}
Probab=37.65 E-value=10 Score=29.33 Aligned_cols=38 Identities=18% Similarity=0.374 Sum_probs=30.9
Q ss_pred CCCcEEEEeCCChhHHHHHHHHHHcCCCCeEEecchHHH
Q 022543 245 PQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIHA 283 (295)
Q Consensus 245 ~~~~iv~~C~~g~rs~~a~~~L~~~G~~~v~~l~GG~~~ 283 (295)
++.+++++|++-..+..++..|...|+ .+..+.|++..
T Consensus 29 ~~~~~iVF~~~~~~~~~l~~~L~~~~~-~~~~~~g~~~~ 66 (170)
T 2yjt_D 29 EATRSIVFVRKRERVHELANWLREAGI-NNCYLEGEMVQ 66 (170)
Confidence 456799999998888899999998887 47788888653
No 153
>2v1x_A ATP-dependent DNA helicase Q1; DNA strand annealing, mismatch repair, nucleotide-binding, DNA-binding, polymorphism, nuclear protein, ATPase; HET: ADP; 2.00A {Homo sapiens} PDB: 2wwy_A*
Probab=30.79 E-value=36 Score=32.30 Aligned_cols=36 Identities=19% Similarity=0.206 Sum_probs=32.1
Q ss_pred CCCcEEEEeCCChhHHHHHHHHHHcCCCCeEEecchH
Q 022543 245 PQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGI 281 (295)
Q Consensus 245 ~~~~iv~~C~~g~rs~~a~~~L~~~G~~~v~~l~GG~ 281 (295)
++.++||||++-..+..++..|...|+ ++..+.||+
T Consensus 266 ~~~~~IVf~~sr~~~e~la~~L~~~g~-~~~~~h~~l 301 (591)
T 2v1x_A 266 KGQSGIIYCFSQKDSEQVTVSLQNLGI-HAGAYHANL 301 (591)
T ss_dssp TTCEEEEECSSHHHHHHHHHHHHHTTC-CEEEECTTS
T ss_pred cCCCeEEEeCcHHHHHHHHHHHHHCCC-CEEEecCCC
Confidence 567899999998889999999999998 588999986
No 154
>2q05_A Late protein H1, dual specificity protein phosphatase; structural genomics, APC7320, P protein structure initiative; HET: MSE; 2.57A {Vaccinia virus WR}
Probab=30.44 E-value=47 Score=26.27 Aligned_cols=28 Identities=21% Similarity=0.294 Sum_probs=18.6
Q ss_pred CCCcEEEEeCCC-hhHHH-HHHHH-HHcCCC
Q 022543 245 PQKDTYVMCHHG-MRSLQ-VAQWL-QTQGFR 272 (295)
Q Consensus 245 ~~~~iv~~C~~g-~rs~~-a~~~L-~~~G~~ 272 (295)
.+.+|+|+|..| .|+.. ++..| ...|+.
T Consensus 124 ~~~~VlVHC~aG~~RSg~~v~~yL~~~~~~~ 154 (195)
T 2q05_A 124 RNEPVLVHCAAGVNRSGAMILAYLMSKNKES 154 (195)
T ss_dssp TTCCEEEECSSSSSHHHHHHHHHHHHHCCSS
T ss_pred cCCcEEEEcCCCCChHHHHHHHHHHHHhCCC
Confidence 578999999988 77653 33333 345654
No 155
>1oyw_A RECQ helicase, ATP-dependent DNA helicase; winged helix, helix-turn-helix, ATP binding, Zn(2+) binding, hydrolase; 1.80A {Escherichia coli} SCOP: a.4.5.43 c.37.1.19 c.37.1.19 PDB: 1oyy_A*
Probab=30.25 E-value=37 Score=31.50 Aligned_cols=37 Identities=19% Similarity=0.341 Sum_probs=32.2
Q ss_pred CCCcEEEEeCCChhHHHHHHHHHHcCCCCeEEecchHH
Q 022543 245 PQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIH 282 (295)
Q Consensus 245 ~~~~iv~~C~~g~rs~~a~~~L~~~G~~~v~~l~GG~~ 282 (295)
++.+++|||++-..+...+..|+..|+ ++..+.||+.
T Consensus 235 ~~~~~IVf~~sr~~~e~l~~~L~~~g~-~~~~~h~~l~ 271 (523)
T 1oyw_A 235 RGKSGIIYCNSRAKVEDTAARLQSKGI-SAAAYHAGLE 271 (523)
T ss_dssp TTCCEEEECSSHHHHHHHHHHHHHTTC-CEEEECTTSC
T ss_pred CCCcEEEEeCCHHHHHHHHHHHHHCCC-CEEEecCCCC
Confidence 567899999998889999999999998 5888988864
No 156
>2i4i_A ATP-dependent RNA helicase DDX3X; DEAD, structural genomics, SGC, structural GE consortium, hydrolase; HET: AMP; 2.20A {Homo sapiens}
Probab=29.72 E-value=36 Score=29.86 Aligned_cols=39 Identities=13% Similarity=0.194 Sum_probs=32.8
Q ss_pred CCCCCcEEEEeCCChhHHHHHHHHHHcCCCCeEEecchHH
Q 022543 243 FDPQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIH 282 (295)
Q Consensus 243 ~~~~~~iv~~C~~g~rs~~a~~~L~~~G~~~v~~l~GG~~ 282 (295)
...+.+++++|++-..+..++..|...|+ ++..+.|++.
T Consensus 273 ~~~~~~~lVf~~~~~~~~~l~~~L~~~~~-~~~~~h~~~~ 311 (417)
T 2i4i_A 273 TGKDSLTLVFVETKKGADSLEDFLYHEGY-ACTSIHGDRS 311 (417)
T ss_dssp CCTTCEEEEECSSHHHHHHHHHHHHHTTC-CEEEECTTSC
T ss_pred cCCCCeEEEEECCHHHHHHHHHHHHHCCC-CeeEecCCCC
Confidence 34678899999998888999999999998 5888888753
No 157
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=29.54 E-value=64 Score=23.47 Aligned_cols=29 Identities=17% Similarity=0.304 Sum_probs=22.8
Q ss_pred EEEeCCChhHHHHHHHHHHcCCCCeEEecc
Q 022543 250 YVMCHHGMRSLQVAQWLQTQGFRRVFNVSG 279 (295)
Q Consensus 250 v~~C~~g~rs~~a~~~L~~~G~~~v~~l~G 279 (295)
|++|+.|.-+..++..|.+.|+ +|..++-
T Consensus 9 v~I~G~G~iG~~la~~L~~~g~-~V~~id~ 37 (141)
T 3llv_A 9 YIVIGSEAAGVGLVRELTAAGK-KVLAVDK 37 (141)
T ss_dssp EEEECCSHHHHHHHHHHHHTTC-CEEEEES
T ss_pred EEEECCCHHHHHHHHHHHHCCC-eEEEEEC
Confidence 6667778888889999999998 4776654
No 158
>3i32_A Heat resistant RNA dependent ATPase; RNA helicase, dimer, RNA recognition motif, ATP-BIND helicase, nucleotide-binding; 2.80A {Thermus thermophilus}
Probab=29.31 E-value=37 Score=29.15 Aligned_cols=36 Identities=17% Similarity=0.215 Sum_probs=30.8
Q ss_pred CCCcEEEEeCCChhHHHHHHHHHHcCCCCeEEecchH
Q 022543 245 PQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGI 281 (295)
Q Consensus 245 ~~~~iv~~C~~g~rs~~a~~~L~~~G~~~v~~l~GG~ 281 (295)
...+++++|++-..+..++..|...|+ .+..+.|++
T Consensus 27 ~~~~~LVF~~t~~~~~~l~~~L~~~g~-~~~~lhg~l 62 (300)
T 3i32_A 27 SPDRAMVFTRTKAETEEIAQGLLRLGH-PAQALHGDM 62 (300)
T ss_dssp CCSSEEEECSSHHHHHHHHHHHHTTTC-CEEEECSCC
T ss_pred CCCCEEEEECCHHHHHHHHHHHHhCCC-CEEEEeCCC
Confidence 367899999998888899999999998 488888874
No 159
>1p8a_A Protein tyrosine phosphatase; hydrolase; NMR {Tritrichomonas foetus} SCOP: c.44.1.1
Probab=28.26 E-value=8.3 Score=29.41 Aligned_cols=39 Identities=13% Similarity=0.055 Sum_probs=29.4
Q ss_pred CcEEEEeCC-ChhHHHHHHHHHHcCCCCeEEecchHHHcc
Q 022543 247 KDTYVMCHH-GMRSLQVAQWLQTQGFRRVFNVSGGIHAYA 285 (295)
Q Consensus 247 ~~iv~~C~~-g~rs~~a~~~L~~~G~~~v~~l~GG~~~W~ 285 (295)
..|+|+|.+ -.||..|...|+...-.++.+...|...|.
T Consensus 5 ~~VLFVC~gN~cRSpmAEal~~~~~~~~~~v~SAGt~~~~ 44 (146)
T 1p8a_A 5 KAVLFVCLGNICRSPACEGICRDMVGDKLIIDSAATSGFH 44 (146)
T ss_dssp CCEEEESSSSCSSSTTHHHHHHHHHSSCSSCEEECSCTTS
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHhcCCCEEEEeeecCCcc
Confidence 369999984 468888888888754344677788888883
No 160
>1vkr_A Mannitol-specific PTS system enzyme iiabc compone; phosphotransferase, transferase, kinase, sugar transport; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1vrv_A* 2few_B*
Probab=27.60 E-value=38 Score=25.01 Aligned_cols=26 Identities=35% Similarity=0.507 Sum_probs=18.3
Q ss_pred CCcEEEEeCCChhHHHH-HHHH----HHcCC
Q 022543 246 QKDTYVMCHHGMRSLQV-AQWL----QTQGF 271 (295)
Q Consensus 246 ~~~iv~~C~~g~rs~~a-~~~L----~~~G~ 271 (295)
-+.|+++|.+|..+..+ +..| .+.|+
T Consensus 13 ~kkIlvVC~sGmgTS~ml~~klkk~~~e~gi 43 (125)
T 1vkr_A 13 VRKIIVACDAGMGSSAMGAGVLRKKIQDAGL 43 (125)
T ss_dssp CCEEEECCSSSSHHHHHHHHHHHHHHHHTTC
T ss_pred ccEEEEECCCcHHHHHHHHHHHHHHHHHCCC
Confidence 35799999999876654 4444 44677
No 161
>1zwy_A Hypothetical UPF0244 protein VC0702; hypothetical protein, structural genomics, PSI, protein STRU initiative; 1.90A {Vibrio cholerae} SCOP: c.51.4.3 PDB: 1zno_A
Probab=27.36 E-value=35 Score=27.26 Aligned_cols=41 Identities=27% Similarity=0.368 Sum_probs=28.9
Q ss_pred HHHHHHhCCCCcHHHHHHHhCCCC-CccCCCcccceeCCCCc
Q 022543 106 SELQRRVSQGKDLSDLAVEHSICP-SKGEGGMLGWVRKGQLV 146 (295)
Q Consensus 106 ~~i~~~i~~g~~F~~~a~~~S~d~-~~~~gG~lg~~~~~~~~ 146 (295)
..+.+.|++|....++..++.... .+.++|.+|.++.+.+.
T Consensus 119 ~~v~~~i~~G~ELG~vmd~~~g~~ni~~~~GaIG~lT~g~~t 160 (185)
T 1zwy_A 119 PLVLERLRQAKELGDVMDEVFGTENIKQKGGAIGLLTRHHLT 160 (185)
T ss_dssp HHHHHHHTTC-CHHHHHHHHHC-------CHHHHHHTTTSSC
T ss_pred HHHHHHHHcCCCHHHHHHHHhCCCcccccCchhhhhcCCcee
Confidence 346777889999999999987766 89999999999998875
No 162
>1xti_A Probable ATP-dependent RNA helicase P47; alpha-beta fold, gene regulation; 1.95A {Homo sapiens} SCOP: c.37.1.19 c.37.1.19 PDB: 1xtj_A* 1xtk_A
Probab=27.02 E-value=49 Score=28.63 Aligned_cols=36 Identities=19% Similarity=0.328 Sum_probs=30.9
Q ss_pred CCCcEEEEeCCChhHHHHHHHHHHcCCCCeEEecchH
Q 022543 245 PQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGI 281 (295)
Q Consensus 245 ~~~~iv~~C~~g~rs~~a~~~L~~~G~~~v~~l~GG~ 281 (295)
+..+++++|++-..+..++..|...|+ ++..+.|++
T Consensus 249 ~~~~~lvf~~~~~~~~~l~~~L~~~~~-~~~~~~~~~ 284 (391)
T 1xti_A 249 EFNQVVIFVKSVQRCIALAQLLVEQNF-PAIAIHRGM 284 (391)
T ss_dssp CCSEEEEECSCHHHHHHHHHHHHHTTC-CEEEECTTS
T ss_pred CCCcEEEEeCcHHHHHHHHHHHHhCCC-cEEEEeCCC
Confidence 557899999998889999999999998 477888875
No 163
>1s2m_A Putative ATP-dependent RNA helicase DHH1; ATP-binding, RNA-binding, RNA binding protein; 2.10A {Saccharomyces cerevisiae} SCOP: c.37.1.19 c.37.1.19 PDB: 2wax_A* 2way_A
Probab=25.54 E-value=47 Score=28.92 Aligned_cols=37 Identities=11% Similarity=0.296 Sum_probs=31.2
Q ss_pred CCCcEEEEeCCChhHHHHHHHHHHcCCCCeEEecchHH
Q 022543 245 PQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIH 282 (295)
Q Consensus 245 ~~~~iv~~C~~g~rs~~a~~~L~~~G~~~v~~l~GG~~ 282 (295)
+..+++++|++-..+..++..|...|+ .+..+.|++.
T Consensus 257 ~~~~~lVf~~~~~~~~~l~~~L~~~~~-~~~~~~~~~~ 293 (400)
T 1s2m_A 257 QINQAIIFCNSTNRVELLAKKITDLGY-SCYYSHARMK 293 (400)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHHHTC-CEEEECTTSC
T ss_pred CCCcEEEEEecHHHHHHHHHHHHhcCC-CeEEecCCCC
Confidence 456899999998889999999999998 4788888753
No 164
>1hv8_A Putative ATP-dependent RNA helicase MJ0669; RNA-binding protein, ATPase, RNA binding protein; 3.00A {Methanocaldococcus jannaschii} SCOP: c.37.1.19 c.37.1.19
Probab=25.38 E-value=55 Score=27.84 Aligned_cols=37 Identities=19% Similarity=0.372 Sum_probs=31.3
Q ss_pred CCCCcEEEEeCCChhHHHHHHHHHHcCCCCeEEecchH
Q 022543 244 DPQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGI 281 (295)
Q Consensus 244 ~~~~~iv~~C~~g~rs~~a~~~L~~~G~~~v~~l~GG~ 281 (295)
....+++++|++-..+..++..|+..|+ ++..+.|++
T Consensus 236 ~~~~~~lvf~~~~~~~~~l~~~L~~~~~-~~~~~~~~~ 272 (367)
T 1hv8_A 236 NKEFYGLVFCKTKRDTKELASMLRDIGF-KAGAIHGDL 272 (367)
T ss_dssp STTCCEEEECSSHHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred cCCCcEEEEECCHHHHHHHHHHHHhcCC-CeEEeeCCC
Confidence 3567799999998889999999999998 478888875
No 165
>1fpz_A Cyclin-dependent kinase inhibitor 3; alpha-beta sandwich, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.1 PDB: 1fq1_A*
Probab=25.02 E-value=59 Score=25.90 Aligned_cols=27 Identities=22% Similarity=0.161 Sum_probs=18.4
Q ss_pred CCCcEEEEeCCCh-hHH-HHHHHHHHc--CC
Q 022543 245 PQKDTYVMCHHGM-RSL-QVAQWLQTQ--GF 271 (295)
Q Consensus 245 ~~~~iv~~C~~g~-rs~-~a~~~L~~~--G~ 271 (295)
.+.+|+|+|..|. |+. .++.+|... |.
T Consensus 132 ~~~~VlVHC~aG~gRTg~~~a~~L~~~~~g~ 162 (212)
T 1fpz_A 132 NYRKTLIHSYGGLGRSCLVAACLLLYLSDTI 162 (212)
T ss_dssp TTCCEEEECSSSSSHHHHHHHHHHHHHCSSC
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHHHhccCC
Confidence 5789999999874 664 444555543 54
No 166
>1jl3_A Arsenate reductase; alpha-beta fold, PTP-loop, oxidoreductase; 1.60A {Bacillus subtilis} SCOP: c.44.1.1 PDB: 1z2d_A 1z2e_A 2ipa_B
Probab=24.93 E-value=69 Score=23.80 Aligned_cols=36 Identities=25% Similarity=0.272 Sum_probs=27.2
Q ss_pred cEEEEeCC-ChhHHHHHHHHHHcCCCCeEEecchHHH
Q 022543 248 DTYVMCHH-GMRSLQVAQWLQTQGFRRVFNVSGGIHA 283 (295)
Q Consensus 248 ~iv~~C~~-g~rs~~a~~~L~~~G~~~v~~l~GG~~~ 283 (295)
.|+|+|.+ -.||..|..+|+.+.-.++.+...|...
T Consensus 5 ~VLFVC~gN~cRSpmAEai~~~~~~~~~~v~SAGt~~ 41 (139)
T 1jl3_A 5 IIYFLCTGNSCRSQMAEGWAKQYLGDEWKVYSAGIEA 41 (139)
T ss_dssp EEEEEESSSSSHHHHHHHHHHHHSCTTEEEEEEESSC
T ss_pred eEEEEcCCchHHHHHHHHHHHHhCCCCEEEEcCcCCC
Confidence 69999985 4789999999988543467777777665
No 167
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=23.72 E-value=1.1e+02 Score=22.72 Aligned_cols=30 Identities=20% Similarity=0.177 Sum_probs=23.6
Q ss_pred EEEEeCCChhHHHHHHHHHHcCCCCeEEecc
Q 022543 249 TYVMCHHGMRSLQVAQWLQTQGFRRVFNVSG 279 (295)
Q Consensus 249 iv~~C~~g~rs~~a~~~L~~~G~~~v~~l~G 279 (295)
-|++|+.|.-+..++..|...|+ +|.+++-
T Consensus 21 ~v~IiG~G~iG~~la~~L~~~g~-~V~vid~ 50 (155)
T 2g1u_A 21 YIVIFGCGRLGSLIANLASSSGH-SVVVVDK 50 (155)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cEEEECCCHHHHHHHHHHHhCCC-eEEEEEC
Confidence 35666779999999999999998 5777653
No 168
>3pey_A ATP-dependent RNA helicase DBP5; RECA, DEAD-BOX, ATPase, helicase, mRNA-export, nuclear pore, hydrolase-RNA complex; HET: ADP; 1.40A {Saccharomyces cerevisiae} PDB: 3pew_A* 3pex_A* 3pez_A* 3rrm_A* 3rrn_A* 2kbe_A 3gfp_A 2kbf_A 3pev_A* 3peu_A*
Probab=23.56 E-value=55 Score=28.18 Aligned_cols=36 Identities=11% Similarity=0.146 Sum_probs=31.1
Q ss_pred CCCcEEEEeCCChhHHHHHHHHHHcCCCCeEEecchH
Q 022543 245 PQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGI 281 (295)
Q Consensus 245 ~~~~iv~~C~~g~rs~~a~~~L~~~G~~~v~~l~GG~ 281 (295)
.+.+++++|++-..+..++..|+..|+ ++..+.|++
T Consensus 242 ~~~~~lvf~~~~~~~~~l~~~l~~~~~-~~~~~~~~~ 277 (395)
T 3pey_A 242 TIGSSIIFVATKKTANVLYGKLKSEGH-EVSILHGDL 277 (395)
T ss_dssp TSSEEEEECSCHHHHHHHHHHHHHTTC-CCEEECTTS
T ss_pred cCCCEEEEeCCHHHHHHHHHHHHhcCC-cEEEeCCCC
Confidence 457899999998888999999999998 588888875
No 169
>3rh0_A Arsenate reductase; oxidoreductase; 1.72A {Corynebacterium glutamicum}
Probab=23.02 E-value=84 Score=23.83 Aligned_cols=36 Identities=25% Similarity=0.202 Sum_probs=26.9
Q ss_pred CcEEEEeCC-ChhHHHHHHHHHHcCCCCeEEecchHH
Q 022543 247 KDTYVMCHH-GMRSLQVAQWLQTQGFRRVFNVSGGIH 282 (295)
Q Consensus 247 ~~iv~~C~~-g~rs~~a~~~L~~~G~~~v~~l~GG~~ 282 (295)
..|+|+|.+ -.||..|...|+.+.-+++.+...|..
T Consensus 21 ~~VLFVC~gN~cRSpmAEal~~~~~~~~~~v~SAGt~ 57 (148)
T 3rh0_A 21 KSVLFVCVGNGGKSQMAAALAQKYASDSVEIHSAGTK 57 (148)
T ss_dssp CEEEEEESSSSSHHHHHHHHHHHHCCTTSEEEEEESS
T ss_pred CEEEEECCCchhHHHHHHHHHHHhcCCCEEEEecccC
Confidence 469999985 468999999998865456777766654
No 170
>3fht_A ATP-dependent RNA helicase DDX19B; DBP5, DEAD-box helicase, RNA dependent ATPase, mRNA export, nucleocytoplasmic transport, NUP214, CAN; HET: ANP; 2.20A {Homo sapiens} PDB: 3ews_A* 3g0h_A* 3fhc_B
Probab=22.89 E-value=56 Score=28.43 Aligned_cols=36 Identities=22% Similarity=0.361 Sum_probs=30.9
Q ss_pred CCCcEEEEeCCChhHHHHHHHHHHcCCCCeEEecchH
Q 022543 245 PQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGI 281 (295)
Q Consensus 245 ~~~~iv~~C~~g~rs~~a~~~L~~~G~~~v~~l~GG~ 281 (295)
...+++++|++-..+..++..|...|+ ++..+.|++
T Consensus 265 ~~~~~lvf~~~~~~~~~l~~~L~~~~~-~~~~~~~~~ 300 (412)
T 3fht_A 265 TIAQAMIFCHTRKTASWLAAELSKEGH-QVALLSGEM 300 (412)
T ss_dssp SSSEEEEECSSHHHHHHHHHHHHHTTC-CCEEECTTS
T ss_pred CCCCEEEEeCCHHHHHHHHHHHHhCCC-eEEEecCCC
Confidence 456899999998889999999999998 578888884
No 171
>2j0s_A ATP-dependent RNA helicase DDX48; mRNA processing, phosphorylation, rRNA processing, mRNA splicing, mRNA transport; HET: ANP; 2.21A {Homo sapiens} SCOP: c.37.1.19 c.37.1.19 PDB: 2j0q_A* 2hyi_C* 3ex7_C* 2xb2_A* 2hxy_A 2j0u_A 2j0u_B 2zu6_A
Probab=22.33 E-value=59 Score=28.43 Aligned_cols=36 Identities=11% Similarity=0.286 Sum_probs=30.6
Q ss_pred CCcEEEEeCCChhHHHHHHHHHHcCCCCeEEecchHH
Q 022543 246 QKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSGGIH 282 (295)
Q Consensus 246 ~~~iv~~C~~g~rs~~a~~~L~~~G~~~v~~l~GG~~ 282 (295)
..+++++|++-..+..++..|...|+ ++..+.|++.
T Consensus 276 ~~~~lVf~~~~~~~~~l~~~L~~~~~-~~~~~h~~~~ 311 (410)
T 2j0s_A 276 ITQAVIFCNTKRKVDWLTEKMREANF-TVSSMHGDMP 311 (410)
T ss_dssp SSEEEEECSSHHHHHHHHHHHHHTTC-CCEEECTTSC
T ss_pred CCcEEEEEcCHHHHHHHHHHHHhCCC-ceEEeeCCCC
Confidence 45899999998888999999999998 5888888753
No 172
>4etn_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.10A {Bacillus subtilis} PDB: 4eti_A 1zgg_A
Probab=21.99 E-value=30 Score=27.48 Aligned_cols=38 Identities=24% Similarity=0.308 Sum_probs=28.8
Q ss_pred CcEEEEeCC-ChhHHHHHHHHHHc----CCCCeEEecchHHHcc
Q 022543 247 KDTYVMCHH-GMRSLQVAQWLQTQ----GFRRVFNVSGGIHAYA 285 (295)
Q Consensus 247 ~~iv~~C~~-g~rs~~a~~~L~~~----G~~~v~~l~GG~~~W~ 285 (295)
..|+|+|.+ -.||..|...|+.+ |. ++.+...|..+|.
T Consensus 35 ~~VLFVC~gNiCRSpmAEai~r~~~~~~g~-~~~v~SAGt~~~~ 77 (184)
T 4etn_A 35 MDIIFVCTGNTSRSPMAEALFKSIAEREGL-NVNVRSAGVFASP 77 (184)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHHHHHTC-CEEEEEEETTCCT
T ss_pred CEEEEECCCchhHHHHHHHHHHHHHHhcCC-cEEEEeeecCCcC
Confidence 469999985 46888888887653 42 5778888998885
No 173
>1jf8_A Arsenate reductase; ptpase I fold, P-loop, sulfinic acid, oxidoreductase; 1.12A {Staphylococcus aureus} SCOP: c.44.1.1 PDB: 1jfv_A 2fxi_A 1lju_A* 1rxi_A 1rxe_A 1ljl_A 2cd7_A 1lk0_A
Probab=21.68 E-value=88 Score=22.99 Aligned_cols=37 Identities=22% Similarity=0.172 Sum_probs=27.3
Q ss_pred CcEEEEeCC-ChhHHHHHHHHHHcCCCCeEEecchHHH
Q 022543 247 KDTYVMCHH-GMRSLQVAQWLQTQGFRRVFNVSGGIHA 283 (295)
Q Consensus 247 ~~iv~~C~~-g~rs~~a~~~L~~~G~~~v~~l~GG~~~ 283 (295)
+.|+|+|.+ -.||..|...|+...-.++.+...|...
T Consensus 4 ~~VLFVC~gN~cRSpmAEa~~~~~~~~~~~v~SAGt~~ 41 (131)
T 1jf8_A 4 KTIYFISTGNSARSQMAEGWGKEILGEGWNVYSAGIET 41 (131)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHSTTTEEEEEEESSC
T ss_pred CEEEEEcCCcchHHHHHHHHHHHhcCCCEEEEcCcCCC
Confidence 358999985 4789999999988532467777777664
No 174
>2l17_A Synarsc, arsenate reductase; alpha/beta sandwich, oxidoreductase; NMR {Synechocystis} PDB: 2l18_A 2l19_A
Probab=21.13 E-value=1e+02 Score=22.73 Aligned_cols=35 Identities=20% Similarity=0.354 Sum_probs=26.4
Q ss_pred cEEEEeCC-ChhHHHHHHHHHHcCCCCeEEecchHH
Q 022543 248 DTYVMCHH-GMRSLQVAQWLQTQGFRRVFNVSGGIH 282 (295)
Q Consensus 248 ~iv~~C~~-g~rs~~a~~~L~~~G~~~v~~l~GG~~ 282 (295)
.|+|+|.+ -.||..|...|+.+.-.++.+...|..
T Consensus 6 ~VLFVC~gN~cRSpmAEa~~~~~~~~~~~v~SAGt~ 41 (134)
T 2l17_A 6 KVMFVCKRNSCRSQMAEGFAKTLGAGKIAVTSCGLE 41 (134)
T ss_dssp EEEEECCSSTHHHHHHHHHHHHHSBTTEEEEEECCT
T ss_pred EEEEEeCCchHHHHHHHHHHHHHcCCCEEEEcccCC
Confidence 68999985 468889988998864345777777765
No 175
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=21.09 E-value=1e+02 Score=21.88 Aligned_cols=29 Identities=14% Similarity=0.215 Sum_probs=20.9
Q ss_pred EEEeCCChhHHHHHHHHHHcCCCCeEEecc
Q 022543 250 YVMCHHGMRSLQVAQWLQTQGFRRVFNVSG 279 (295)
Q Consensus 250 v~~C~~g~rs~~a~~~L~~~G~~~v~~l~G 279 (295)
|++|+.|.-+...+..|...|+ +|.+++-
T Consensus 7 i~IiG~G~iG~~~a~~L~~~g~-~v~~~d~ 35 (140)
T 1lss_A 7 IIIAGIGRVGYTLAKSLSEKGH-DIVLIDI 35 (140)
T ss_dssp EEEECCSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred EEEECCCHHHHHHHHHHHhCCC-eEEEEEC
Confidence 4556678888888888888886 4766653
No 176
>3rz2_A Protein tyrosine phosphatase type IVA 1; tyrosine phosphatase, dual specific phosphatase, COMP with peptide, hydrolase; 2.80A {Rattus norvegicus} PDB: 1x24_A 1zcl_A
Probab=20.85 E-value=80 Score=24.58 Aligned_cols=28 Identities=32% Similarity=0.312 Sum_probs=19.1
Q ss_pred CCCCcEEEEeCCC-hhHH-HHHHHHHHcCC
Q 022543 244 DPQKDTYVMCHHG-MRSL-QVAQWLQTQGF 271 (295)
Q Consensus 244 ~~~~~iv~~C~~g-~rs~-~a~~~L~~~G~ 271 (295)
.++.+|+|+|..| .|+. .++..|...|+
T Consensus 115 ~~~~~VlVHC~aG~gRSg~~va~~L~~~g~ 144 (189)
T 3rz2_A 115 EPGCCIAVHCVAGLGRAPVLVALALIEGGM 144 (189)
T ss_dssp STTCEEEEECSSSSTTHHHHHHHHHHTTTC
T ss_pred CCCCcEEEECCCCCCHHHHHHHHHHHHcCC
Confidence 4678999999987 4664 45555555554
No 177
>3n8i_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, hydrolase, protein-ligand complex; HET: NLA; 1.50A {Homo sapiens} SCOP: c.44.1.1 PDB: 5pnt_A* 1xww_A 1bvh_A 1dg9_A* 1phr_A 1pnt_A 1z12_A 1z13_A 1c0e_A 2p4u_A
Probab=20.52 E-value=63 Score=24.74 Aligned_cols=40 Identities=18% Similarity=0.134 Sum_probs=29.6
Q ss_pred CCcEEEEeCC-ChhHHHHHHHHHH----cCCC-CeEEecchHHHcc
Q 022543 246 QKDTYVMCHH-GMRSLQVAQWLQT----QGFR-RVFNVSGGIHAYA 285 (295)
Q Consensus 246 ~~~iv~~C~~-g~rs~~a~~~L~~----~G~~-~v~~l~GG~~~W~ 285 (295)
...|+|+|.+ -.||..|...|+. .|.. ++.+...|...|.
T Consensus 5 ~~~vLFVC~gN~cRSpmAE~~~~~~~~~~gl~~~~~v~SAGt~~~~ 50 (157)
T 3n8i_A 5 TKSVLFVCLGNICRSPIAEAVFRKLVTDQNISENWRVDSAATSGYE 50 (157)
T ss_dssp CEEEEEEESSSSSHHHHHHHHHHHHHHHTTCGGGEEEEEEESSSTT
T ss_pred CCEEEEECCCchhHHHHHHHHHHHHHHHcCCCCcEEEEeeecCccc
Confidence 3468999985 4688888777765 4664 5788888998883
No 178
>2der_A TRNA-specific 2-thiouridylase MNMA; protein-RNA complex, transferase/RNA complex; 3.10A {Escherichia coli} PDB: 2det_A 2deu_A*
Probab=20.46 E-value=71 Score=28.41 Aligned_cols=28 Identities=32% Similarity=0.328 Sum_probs=22.9
Q ss_pred CCCcEEEEeCCChhHHHHHHHHHHcCCC
Q 022543 245 PQKDTYVMCHHGMRSLQVAQWLQTQGFR 272 (295)
Q Consensus 245 ~~~~iv~~C~~g~rs~~a~~~L~~~G~~ 272 (295)
++++|++-..+|..|..++..|.+.||+
T Consensus 16 ~~~kVvVa~SGGvDSsv~a~lL~~~G~~ 43 (380)
T 2der_A 16 TAKKVIVGMSGGVDSSVSAWLLQQQGYQ 43 (380)
T ss_dssp -CCEEEEECCSCSTTHHHHHHHHTTCCE
T ss_pred CCCEEEEEEEChHHHHHHHHHHHHcCCe
Confidence 4567888888899999999999988974
No 179
>1wp9_A ATP-dependent RNA helicase, putative; ATPase, DNA replication, DNA repair, DNA recombina hydrolase; 2.90A {Pyrococcus furiosus} SCOP: c.37.1.19 c.37.1.19
Probab=20.45 E-value=95 Score=27.30 Aligned_cols=35 Identities=11% Similarity=0.167 Sum_probs=30.3
Q ss_pred CCCCcEEEEeCCChhHHHHHHHHHHcCCCCeEEecc
Q 022543 244 DPQKDTYVMCHHGMRSLQVAQWLQTQGFRRVFNVSG 279 (295)
Q Consensus 244 ~~~~~iv~~C~~g~rs~~a~~~L~~~G~~~v~~l~G 279 (295)
.++.+++++|.+-..+..++..|...|+ ++..+.|
T Consensus 359 ~~~~k~lVF~~~~~~~~~l~~~L~~~~~-~~~~~~g 393 (494)
T 1wp9_A 359 KQNSKIIVFTNYRETAKKIVNELVKDGI-KAKRFVG 393 (494)
T ss_dssp CTTCCEEEECSCHHHHHHHHHHHHHTTC-CEEEECC
T ss_pred CCCCeEEEEEccHHHHHHHHHHHHHcCC-CcEEEec
Confidence 4678899999998888899999999998 4778888
No 180
>1wy5_A TILS, hypothetical UPF0072 protein AQ_1887; N-type ATP-ppase, structural genomics, translation, NPPSFA; 2.42A {Aquifex aeolicus} SCOP: c.26.2.5 d.229.1.1 PDB: 2e21_A* 2e89_A*
Probab=20.30 E-value=1.2e+02 Score=25.83 Aligned_cols=27 Identities=15% Similarity=0.273 Sum_probs=20.3
Q ss_pred CCCCCcEEEEeCCChhHHHHHHHHHHc
Q 022543 243 FDPQKDTYVMCHHGMRSLQVAQWLQTQ 269 (295)
Q Consensus 243 ~~~~~~iv~~C~~g~rs~~a~~~L~~~ 269 (295)
+.++++|+|-+.+|..|..++..|...
T Consensus 21 ~~~~~~vlva~SGG~DS~~Ll~ll~~~ 47 (317)
T 1wy5_A 21 FSGERRVLIAFSGGVDSVVLTDVLLKL 47 (317)
T ss_dssp CSSCCEEEEECCSSHHHHHHHHHHHHS
T ss_pred CCCCCEEEEEecchHHHHHHHHHHHHH
Confidence 355677888888888888877777664
No 181
>4fak_A Ribosomal RNA large subunit methyltransferase H; alpha/beta methyltransferase rossmann fold, rRNA methylation rRNA, ribosomal protein; HET: SAM PG4; 1.70A {Staphylococcus aureus} PDB: 1vh0_A
Probab=20.14 E-value=60 Score=25.24 Aligned_cols=46 Identities=28% Similarity=0.291 Sum_probs=33.8
Q ss_pred cccCCCCCcEEEEeCCCh--hHHHHHHHHHH---cCCCCeEEecchHHHcc
Q 022543 240 TVKFDPQKDTYVMCHHGM--RSLQVAQWLQT---QGFRRVFNVSGGIHAYA 285 (295)
Q Consensus 240 ~~~~~~~~~iv~~C~~g~--rs~~a~~~L~~---~G~~~v~~l~GG~~~W~ 285 (295)
+..++++..+|+.|-.|. .|...|..|.. .|..++..+.||-.+..
T Consensus 68 l~~i~~~~~vI~LD~~Gk~~sS~~fA~~l~~~~~~g~~~i~FvIGG~~Gl~ 118 (163)
T 4fak_A 68 LAKIKPQSTVITLEIQGKMLSSEGLAQELNQRMTQGQSDFVFVIGGSNGLH 118 (163)
T ss_dssp HHTCCTTSEEEEEEEEEEECCHHHHHHHHHHHHHTTCCEEEEEECBTTBCC
T ss_pred HHhCCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCcceEEEEECCCccC
Confidence 445677778888887664 58888888865 68778999999865443
Done!