Query 022544
Match_columns 295
No_of_seqs 112 out of 501
Neff 6.8
Searched_HMMs 46136
Date Fri Mar 29 04:21:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022544.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/022544hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF03619 Solute_trans_a: Organ 100.0 9.8E-77 2.1E-81 548.3 28.3 265 9-280 1-274 (274)
2 KOG2641 Predicted seven transm 100.0 7.9E-72 1.7E-76 528.9 27.6 274 6-287 30-308 (386)
3 KOG3979 FGF receptor activatin 58.0 78 0.0017 29.9 9.0 84 8-99 172-258 (296)
4 COG2864 FdnI Cytochrome b subu 32.2 2.2E+02 0.0048 25.7 7.4 62 3-67 107-168 (218)
5 PRK11056 hypothetical protein; 28.2 2.6E+02 0.0057 22.9 6.5 52 18-69 38-89 (120)
6 PF05545 FixQ: Cbb3-type cytoc 27.3 1.9E+02 0.0041 19.3 4.8 32 248-279 3-34 (49)
7 PF00558 Vpu: Vpu protein; In 26.8 95 0.0021 23.7 3.5 20 31-50 23-42 (81)
8 cd00930 Cyt_c_Oxidase_VIII Cyt 25.3 2.1E+02 0.0044 19.2 4.5 34 5-40 9-42 (43)
9 PF07226 DUF1422: Protein of u 24.7 3.3E+02 0.0071 22.2 6.4 52 18-69 38-89 (117)
10 PF14333 DUF4389: Domain of un 21.4 1.2E+02 0.0025 22.8 3.1 24 43-66 2-25 (80)
11 PF10361 DUF2434: Protein of u 21.3 1.6E+02 0.0035 27.8 4.6 50 4-54 210-260 (296)
12 PF12292 DUF3624: Protein of u 21.1 3.7E+02 0.008 20.3 6.4 53 138-196 13-65 (77)
13 PRK10764 potassium-tellurite e 20.9 4.7E+02 0.01 24.6 7.9 59 8-66 161-219 (324)
No 1
>PF03619 Solute_trans_a: Organic solute transporter Ostalpha; InterPro: IPR005178 This is a family of mainly hypothetical proteins of no known function.
Probab=100.00 E-value=9.8e-77 Score=548.32 Aligned_cols=265 Identities=38% Similarity=0.698 Sum_probs=244.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHhHHHHHHHHH
Q 022544 9 AQITLMGSGLCVMLTMHFTMRLLQQHLFYWKNPKEQKAIIIIILMAPIYAVDSFVGLLDIKGSKPFFTFLDSVKECYEAL 88 (295)
Q Consensus 9 ~~~~~~~ag~~~~l~~~is~~~i~~Hl~~y~~P~~Qr~iiRIl~mvPiyai~S~lsl~~p~~s~~~~~y~~~ird~YeA~ 88 (295)
|++++++||+|+++|+++|+++|++|++||++|++||+++||++|+|+||++||+|+++||++ +|+|++||+|||+
T Consensus 1 ~~~~~~ia~~~~~~~~~is~~~i~~hl~~y~~P~~Qr~iirIl~m~Piyai~S~~sl~~p~~~----~~~~~ir~~Yea~ 76 (274)
T PF03619_consen 1 HTWAWIIAGIFALLTILISLFLIYQHLRNYSKPEEQRYIIRILLMVPIYAICSLLSLLFPRAA----IYLDFIRDCYEAF 76 (274)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhh----HHHHHHHHHHHHH
Confidence 688999999999999999999999999999999999999999999999999999999999975 6999999999999
Q ss_pred HHHHHHHHHHHhcCCCcccccccccccCC-ccccCCccc--ccCCcccccChhhHHHHHHHHhhhHHHHHHHHHHHHHHH
Q 022544 89 VIAKFMALMYSYLKISISKNIVPDEIKGR-EIHHSFPMT--LFQPRTVRLDHHTLKLLKYWTWQFVVIRPICSILMITLQ 165 (295)
Q Consensus 89 vly~F~~Ll~~ylGg~~~~~~~~~~~~~~-~i~~~~P~~--~~~p~~~~~~~~~l~~~k~~vlQy~vvkPl~~i~~ii~~ 165 (295)
++|+|+.||++|+||+++ ..+.++++ +++|+||+| ||++++.+.|++++|+||+||+||+++||++++++++++
T Consensus 77 ~ly~F~~Ll~~y~gg~~~---~~~~l~~~~~~~~~~P~~~~~~c~~~~~~~~~~l~~~k~~VlQ~~vvrpl~~~i~iil~ 153 (274)
T PF03619_consen 77 VLYSFFSLLLNYLGGEEA---LVEVLSGKPPIKHPWPCCCCCCCLPPWPMTKRFLRRCKWGVLQYVVVRPLLSIISIILE 153 (274)
T ss_pred HHHHHHHHHHHHhCCHHH---HHHHhhcCCCCCCCCcccccccCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999743 33444444 567999983 344445788999999999999999999999999999999
Q ss_pred HhccCCC------chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCchhhhHHHHHHHHHHHHHHHHHHHHhcCcc
Q 022544 166 LLRIYPS------WLSWTFTIILNVSVSLALYSLVVFYHVFAKELGPHKPLAKFMCIKGIVFFCFWQDVVLEILAGMGII 239 (295)
Q Consensus 166 ~~g~Y~~------~~~~~~~ii~niS~~~Aly~L~~Fy~~~k~~L~~~~P~~KFl~iK~vvflsfwQ~~ii~iL~~~g~i 239 (295)
..|.|++ .++.|+++++|+|+++|+|||.+||+++|++|+|+||++||+|+|+|+|++|||++++++|.+.|++
T Consensus 154 ~~g~y~~~~~~~~~~~~~l~ii~~iS~~~Aly~L~~fy~~~~~~L~~~~p~~KF~~iK~vvfl~f~Q~~ii~iL~~~g~i 233 (274)
T PF03619_consen 154 AFGVYCEGSFSPHSAYLYLTIINNISVTLALYGLVIFYRATKEELKPYRPLLKFLCIKLVVFLSFWQGFIISILASFGVI 233 (274)
T ss_pred HHHHhccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHCCCc
Confidence 9999986 2467899999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCC
Q 022544 240 RSHHFWLDVEHINEAIQNVLVCLEMVVFSIIQQYAYPATPY 280 (295)
Q Consensus 240 ~~~~~~~~~~~~~~~i~~~licvEM~~~ai~~~~aF~~~~Y 280 (295)
++++++.+.+|+++++||+++|+||+++|++|++|||++||
T Consensus 234 ~~~~~~~~~~~~~~~i~~~LicvEM~i~ai~~~~af~~~~y 274 (274)
T PF03619_consen 234 PCTPPWSSPEDIASGIQNFLICVEMFIFAILHRYAFPYSPY 274 (274)
T ss_pred CCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCC
Confidence 99998533459999999999999999999999999999998
No 2
>KOG2641 consensus Predicted seven transmembrane receptor - rhodopsin family [Signal transduction mechanisms]
Probab=100.00 E-value=7.9e-72 Score=528.87 Aligned_cols=274 Identities=40% Similarity=0.686 Sum_probs=251.5
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHhHHHHHH
Q 022544 6 MSRAQITLMGSGLCVMLTMHFTMRLLQQHLFYWKNPKEQKAIIIIILMAPIYAVDSFVGLLDIKGSKPFFTFLDSVKECY 85 (295)
Q Consensus 6 ~~~~~~~~~~ag~~~~l~~~is~~~i~~Hl~~y~~P~~Qr~iiRIl~mvPiyai~S~lsl~~p~~s~~~~~y~~~ird~Y 85 (295)
...+..++.+|+.|+++++.+|+.+|++|++||++|++||+++||++|+||||+.||+|+..|+. ++|+|++||||
T Consensus 30 ~~~~~~~~~~a~~f~vit~~ls~~~I~~HL~~y~~P~~qr~iv~il~mvPIys~~S~vsl~~p~~----~~~~~~vr~~Y 105 (386)
T KOG2641|consen 30 TFLLTVALAIASFFVVITILLSLFHIYQHLRYYSNPREQRPIVRILFMVPIYSVASFVSLLVPRV----AFYLDTVRECY 105 (386)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhhchhhhhhhhhHHHHHHHHHHHhccch----hhhHHHHHHHH
Confidence 45667777799999999999999999999999999999999999999999999999999999984 37999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCcccccccccccCCc--cccCCcccccCCcccccChhhHHHHHHHHhhhHHHHHHHHHHHHH
Q 022544 86 EALVIAKFMALMYSYLKISISKNIVPDEIKGRE--IHHSFPMTLFQPRTVRLDHHTLKLLKYWTWQFVVIRPICSILMIT 163 (295)
Q Consensus 86 eA~vly~F~~Ll~~ylGg~~~~~~~~~~~~~~~--i~~~~P~~~~~p~~~~~~~~~l~~~k~~vlQy~vvkPl~~i~~ii 163 (295)
||+|+|+|++||.+|+||+. +. ..+++|+. .+|++|+|||.|...++|++++|+||+||+||+++||++++++++
T Consensus 106 eaf~ly~F~sLl~~ylGGe~--~~-v~~l~~~~~~~~~~~P~cc~~~p~~~~~~~~lr~~K~~vlQ~~ivkp~~~lv~lv 182 (386)
T KOG2641|consen 106 EAFVLYVFLSLLFHYLGGEQ--NI-VTELEGRLIRVNHTPPFCCFFPPTVRLTPKFLRRCKQGVLQYPIVKPFLALVTLV 182 (386)
T ss_pred HHHHHHHHHHHHHHHcCChH--HH-HHHHhccCCcccCCCCceeccCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999973 33 44566654 469999999988767799999999999999999999999999999
Q ss_pred HHHhccCCCc-hh--HHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCchhhhHHHHHHHHHHHHHHHHHHHHhcCccc
Q 022544 164 LQLLRIYPSW-LS--WTFTIILNVSVSLALYSLVVFYHVFAKELGPHKPLAKFMCIKGIVFFCFWQDVVLEILAGMGIIR 240 (295)
Q Consensus 164 ~~~~g~Y~~~-~~--~~~~ii~niS~~~Aly~L~~Fy~~~k~~L~~~~P~~KFl~iK~vvflsfwQ~~ii~iL~~~g~i~ 240 (295)
+++.|+|+++ .. +|+++++|+|+++|+|||.+||+++||+|+||+|+.||+|+|+|+|+++||++++.++.+.|.++
T Consensus 183 l~~~g~y~~g~~~~~~~~~~i~n~S~~lalY~L~~fy~~~~~~L~py~p~~KF~~vk~ivf~~~wQg~vi~~l~~~g~~~ 262 (386)
T KOG2641|consen 183 LYAFGVYDDGDFSVYLYLTIIYNCSVSLALYSLVLFYTVTKDELSPYQPVVKFLCVKLIVFLSFWQGIVLAILVKLGKIG 262 (386)
T ss_pred HHHhcccccCCccceehhHHHHHHHHHHHHHHHHHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 9999999974 34 68899999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCcchhHHH
Q 022544 241 SHHFWLDVEHINEAIQNVLVCLEMVVFSIIQQYAYPATPYSGDVEAK 287 (295)
Q Consensus 241 ~~~~~~~~~~~~~~i~~~licvEM~~~ai~~~~aF~~~~Y~~~~~~~ 287 (295)
+...+ ..+..+.++||+++|+||+++|++|.||||+++|....++.
T Consensus 263 ~~~~~-~~~~~~~~iQnfiiciEM~i~ai~~~~af~~~~ya~~~~~~ 308 (386)
T KOG2641|consen 263 PSYFD-EVGTVAYGIQNFLICIEMLIAAIAHFYAFPAAPYALFDERS 308 (386)
T ss_pred cccch-hHHHHHHHhhhhHHHHHHHHHHHHHHHhCCcchhccccccc
Confidence 77652 24578999999999999999999999999999998888876
No 3
>KOG3979 consensus FGF receptor activating protein 1 [Signal transduction mechanisms]
Probab=58.02 E-value=78 Score=29.92 Aligned_cols=84 Identities=10% Similarity=0.112 Sum_probs=52.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHH---HHHHHHHHHHHHHHHHHhhcccCCCchhHHHhHHHHH
Q 022544 8 RAQITLMGSGLCVMLTMHFTMRLLQQHLFYWKNPKEQKAI---IIIILMAPIYAVDSFVGLLDIKGSKPFFTFLDSVKEC 84 (295)
Q Consensus 8 ~~~~~~~~ag~~~~l~~~is~~~i~~Hl~~y~~P~~Qr~i---iRIl~mvPiyai~S~lsl~~p~~s~~~~~y~~~ird~ 84 (295)
.|...+.+-++|...-...|...+.-|.++|.+|+-|+.. ++.....++-+.++...+..+. +|+.+- .
T Consensus 172 lha~~Fg~f~ic~~~~ml~s~il~~~~~~~y~~~~g~~s~~~kil~~lv~~~~~~s~~~~~~~~~------~~C~~~--a 243 (296)
T KOG3979|consen 172 LHALGFGVFLICSHILMLDSTILFTWTWKGYVSPHGPLSWRWKILTFLVMVFSFPSGAIFYIRHN------VYCEPG--A 243 (296)
T ss_pred eehhHHHHHHHHHHHHHHHHHHHHHHhhcccCCcCCCcceeehhhHHHHHHHHHHHHHHHHHHhh------hhhhhh--H
Confidence 4455555555555455667778888999999999988866 3344444444444444443322 456544 6
Q ss_pred HHHHHHHHHHHHHHH
Q 022544 85 YEALVIAKFMALMYS 99 (295)
Q Consensus 85 YeA~vly~F~~Ll~~ 99 (295)
|+.++|+.+-+-.++
T Consensus 244 y~~fAi~ey~sV~~n 258 (296)
T KOG3979|consen 244 YTLFAILEYSSVFLN 258 (296)
T ss_pred HHHHHHHHHHHHHHH
Confidence 888888877655544
No 4
>COG2864 FdnI Cytochrome b subunit of formate dehydrogenase [Energy production and conversion]
Probab=32.20 E-value=2.2e+02 Score=25.73 Aligned_cols=62 Identities=10% Similarity=0.106 Sum_probs=50.2
Q ss_pred CCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHHHHHHHHHHHHHHHHHHHhhc
Q 022544 3 LSTMSRAQITLMGSGLCVMLTMHFTMRLLQQHLFYWKNPKEQKAIIIIILMAPIYAVDSFVGLLD 67 (295)
Q Consensus 3 ~~~~~~~~~~~~~ag~~~~l~~~is~~~i~~Hl~~y~~P~~Qr~iiRIl~mvPiyai~S~lsl~~ 67 (295)
-+..|..|=.++...+...+.+++|..-+ .+-|-.|..++..+|+-.+++-.+-.++...+.
T Consensus 107 ~g~Yn~GqKl~fw~~~l~~~~l~iTGivm---w~~y~~~~~~i~~~r~s~l~h~~~a~~l~~~~~ 168 (218)
T COG2864 107 VGKYNAGQKLLFWTAILAIVLLLITGIVI---WRPYFAPYFSIPLLRLSLLLHAFAAVILIFIII 168 (218)
T ss_pred ccccccchHHHHHHHHHHHHHHHHHHHHH---HhhhccccccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566778788877777777888888777 688999999999999999999988888877653
No 5
>PRK11056 hypothetical protein; Provisional
Probab=28.22 E-value=2.6e+02 Score=22.86 Aligned_cols=52 Identities=10% Similarity=0.181 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCcchhhHHHHHHHHHHHHHHHHHHHhhccc
Q 022544 18 LCVMLTMHFTMRLLQQHLFYWKNPKEQKAIIIIILMAPIYAVDSFVGLLDIK 69 (295)
Q Consensus 18 ~~~~l~~~is~~~i~~Hl~~y~~P~~Qr~iiRIl~mvPiyai~S~lsl~~p~ 69 (295)
+|-+++++++.|..+|+..|...|+.=-....-.+.+=++.-..++---.|+
T Consensus 38 iFPlIaLvLavycLyQ~Yl~~~m~eg~P~~a~acFflG~f~ySA~vraeyPe 89 (120)
T PRK11056 38 IFPLIALVLAVYCLHQRYLNRPMPEGLPGLAAACFFLGVFLYSAFVRAEYPE 89 (120)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 4568899999999999999999998654444445554444444444444454
No 6
>PF05545 FixQ: Cbb3-type cytochrome oxidase component FixQ; InterPro: IPR008621 This family consists of several Cbb3-type cytochrome oxidase components (FixQ/CcoQ). FixQ is found in nitrogen fixing bacteria. Since nitrogen fixation is an energy-consuming process, effective symbioses depend on operation of a respiratory chain with a high affinity for O2, closely coupled to ATP production. This requirement is fulfilled by a special three-subunit terminal oxidase (cytochrome terminal oxidase cbb3), which was first identified in Bradyrhizobium japonicum as the product of the fixNOQP operon [].
Probab=27.31 E-value=1.9e+02 Score=19.29 Aligned_cols=32 Identities=22% Similarity=0.231 Sum_probs=24.7
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHhhccCCCC
Q 022544 248 VEHINEAIQNVLVCLEMVVFSIIQQYAYPATP 279 (295)
Q Consensus 248 ~~~~~~~i~~~licvEM~~~ai~~~~aF~~~~ 279 (295)
.+....-.+.+.+.+=+++|..+..|+|+.+.
T Consensus 3 ~~~~~~~~~~~~~v~~~~~F~gi~~w~~~~~~ 34 (49)
T PF05545_consen 3 YETLQGFARSIGTVLFFVFFIGIVIWAYRPRN 34 (49)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
Confidence 45566667777788888888889999998664
No 7
>PF00558 Vpu: Vpu protein; InterPro: IPR008187 The Human immunodeficiency virus 1 (HIV-1) Vpu protein acts in the degradation of CD4 in the endoplasmic reticulum and in the enhancement of virion release from the plasma membrane of infected cells [].; GO: 0019076 release of virus from host; PDB: 2JPX_A 1PI8_A 2GOH_A 2GOF_A 1PI7_A 1PJE_A 1VPU_A 2K7Y_A.
Probab=26.76 E-value=95 Score=23.66 Aligned_cols=20 Identities=15% Similarity=0.134 Sum_probs=4.7
Q ss_pred HHHHHhhcCCcchhhHHHHH
Q 022544 31 LQQHLFYWKNPKEQKAIIII 50 (295)
Q Consensus 31 i~~Hl~~y~~P~~Qr~iiRI 50 (295)
..--+..|.+-..||+|-|.
T Consensus 23 W~iv~ieYrk~~rqrkId~l 42 (81)
T PF00558_consen 23 WTIVYIEYRKIKRQRKIDRL 42 (81)
T ss_dssp HHHH------------CHHH
T ss_pred HHHHHHHHHHHHHHHhHHHH
Confidence 34478889999999988764
No 8
>cd00930 Cyt_c_Oxidase_VIII Cytochrome oxidase c subunit VIII. Cytochrome c oxidase (CcO), the terminal oxidase in the respiratory chains of eukaryotes and most bacteria, is a multi-chain transmembrane protein located in the inner membrane of mitochondria and the cell membrane of prokaryotes. It catalyzes the reduction of O2 and simultaneously pumps protons across the membrane. The number of subunits varies from three to five in bacteria and up to 13 in mammalian mitochondria. Subunits I, II, and III of mammalian CcO are encoded within the mitochondrial genome and the remaining 10 subunits are encoded within the nuclear genome. Found only in eukaryotes, subunit VIII is the smallest of the nuclear-encoded subunits. It exists in muscle-specific and non-muscle-specific isoforms that are differently expressed in different species, suggesting species-specific regulation of energy metabolism.
Probab=25.27 E-value=2.1e+02 Score=19.18 Aligned_cols=34 Identities=18% Similarity=0.048 Sum_probs=21.4
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 022544 5 TMSRAQITLMGSGLCVMLTMHFTMRLLQQHLFYWKN 40 (295)
Q Consensus 5 ~~~~~~~~~~~ag~~~~l~~~is~~~i~~Hl~~y~~ 40 (295)
.++..+.+..++.+|+ --+..+.| ++.||.+|.+
T Consensus 9 ~~s~~E~aigl~~~f~-~~L~p~gW-VLshL~~YKk 42 (43)
T cd00930 9 PLSAAESAIGLSVFFT-TFLLPAGW-VLSHLENYKK 42 (43)
T ss_pred cCCHHHHHHHHHHHHH-HHHhhHHH-HHHHHHHhcc
Confidence 4566777655555444 34445666 4699999976
No 9
>PF07226 DUF1422: Protein of unknown function (DUF1422); InterPro: IPR009867 This family consists of several hypothetical bacterial proteins of around 120 residues in length. The function of this family is unknown.
Probab=24.66 E-value=3.3e+02 Score=22.20 Aligned_cols=52 Identities=10% Similarity=0.211 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCcchhhHHHHHHHHHHHHHHHHHHHhhccc
Q 022544 18 LCVMLTMHFTMRLLQQHLFYWKNPKEQKAIIIIILMAPIYAVDSFVGLLDIK 69 (295)
Q Consensus 18 ~~~~l~~~is~~~i~~Hl~~y~~P~~Qr~iiRIl~mvPiyai~S~lsl~~p~ 69 (295)
+|-+++++++.+..+|+..|...|+.=-....-.+.+=++.-..++---.|+
T Consensus 38 iFPlIaLvLavy~LyQ~Yl~~~m~eg~P~~a~acFflG~f~ySA~vraqyPe 89 (117)
T PF07226_consen 38 IFPLIALVLAVYCLYQRYLNHPMPEGTPKLALACFFLGLFGYSAFVRAQYPE 89 (117)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHHHHHhchh
Confidence 4568899999999999999999998544444444444444433333333333
No 10
>PF14333 DUF4389: Domain of unknown function (DUF4389)
Probab=21.40 E-value=1.2e+02 Score=22.78 Aligned_cols=24 Identities=21% Similarity=0.387 Sum_probs=18.6
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhh
Q 022544 43 EQKAIIIIILMAPIYAVDSFVGLL 66 (295)
Q Consensus 43 ~Qr~iiRIl~mvPiyai~S~lsl~ 66 (295)
.+....|+++|+|.+-+.+..+..
T Consensus 2 r~~~~~R~l~mi~~~ivl~~~~~~ 25 (80)
T PF14333_consen 2 REAVWLRLLLMIPFAIVLSLASIV 25 (80)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456789999999998777766654
No 11
>PF10361 DUF2434: Protein of unknown function (DUF2434); InterPro: IPR018830 This entry represents a family of proteins conserved in fungi. Their function is not known.
Probab=21.33 E-value=1.6e+02 Score=27.75 Aligned_cols=50 Identities=12% Similarity=0.211 Sum_probs=0.0
Q ss_pred CCCchhHHHHH-HHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHHHHHHHHH
Q 022544 4 STMSRAQITLM-GSGLCVMLTMHFTMRLLQQHLFYWKNPKEQKAIIIIILMA 54 (295)
Q Consensus 4 ~~~~~~~~~~~-~ag~~~~l~~~is~~~i~~Hl~~y~~P~~Qr~iiRIl~mv 54 (295)
.+..+..-+-+ .+++|.+++.++..+. ++|-.++.+|+.|-..-|+++++
T Consensus 210 ~a~p~ATD~RfKaa~~~l~~~wl~i~~S-L~hSi~~Yk~r~rg~~~~~~~~i 260 (296)
T PF10361_consen 210 GAKPAATDARFKAASFFLVICWLIIVYS-LRHSIYHYKPRNRGRFNRIIFLI 260 (296)
T ss_pred hccCccchhhHHHHHHHHHHHHHHHHHH-HHHHhheeccCCccchhhhHHHH
No 12
>PF12292 DUF3624: Protein of unknown function (DUF3624); InterPro: IPR022072 This family of proteins is found in bacteria. Proteins in this family are approximately 90 amino acids in length. There is a conserved GRC sequence motif.
Probab=21.13 E-value=3.7e+02 Score=20.28 Aligned_cols=53 Identities=17% Similarity=0.214 Sum_probs=28.5
Q ss_pred hhHHHHHHHHhhhHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHH
Q 022544 138 HTLKLLKYWTWQFVVIRPICSILMITLQLLRIYPSWLSWTFTIILNVSVSLALYSLVVF 196 (295)
Q Consensus 138 ~~l~~~k~~vlQy~vvkPl~~i~~ii~~~~g~Y~~~~~~~~~ii~niS~~~Aly~L~~F 196 (295)
+.+.|||++..|..+. ++++-..+...-.++... +.-|..+....|..+|+..
T Consensus 13 ~KiGRC~rCM~QLtvL----s~~~w~iWw~~f~d~P~s--ieSIALl~~~~AfsgLL~l 65 (77)
T PF12292_consen 13 QKIGRCQRCMWQLTVL----SVLSWPIWWFFFRDTPTS--IESIALLFFCFAFSGLLFL 65 (77)
T ss_pred HHhccHHHHHHHHHHH----HHHHHHHHHHHHcCCcch--HHHHHHHHHHHHHHHHHHH
Confidence 3477899999995443 333333444433343221 3444455555666666543
No 13
>PRK10764 potassium-tellurite ethidium and proflavin transporter; Provisional
Probab=20.90 E-value=4.7e+02 Score=24.61 Aligned_cols=59 Identities=14% Similarity=0.086 Sum_probs=38.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHHHHHHHHHHHHHHHHHHHhh
Q 022544 8 RAQITLMGSGLCVMLTMHFTMRLLQQHLFYWKNPKEQKAIIIIILMAPIYAVDSFVGLL 66 (295)
Q Consensus 8 ~~~~~~~~ag~~~~l~~~is~~~i~~Hl~~y~~P~~Qr~iiRIl~mvPiyai~S~lsl~ 66 (295)
.++.....-|+..++.+.+.--..+|-..|=.-|+.+|..+.|..-+|-.+..+++++.
T Consensus 161 ~~~~~~~~fg~G~~~~l~l~~i~~~Rl~~~~~lp~~~~P~l~I~lAP~~~~~~a~l~~~ 219 (324)
T PRK10764 161 YHDAGLLFLGAGVFSWLSLEPVILQRLRSSGELPTALRPSLGIQLAPAFVGCSAYLSVN 219 (324)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHhhHHHHHHHHHHHc
Confidence 34555554444444444433333334445555778899999999999999999999984
Done!