Query 022546
Match_columns 295
No_of_seqs 127 out of 1141
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 07:15:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022546.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022546hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hhp_A Malate dehydrogenase; M 100.0 1.3E-66 4.4E-71 473.2 32.3 286 5-294 25-312 (312)
2 4aj2_A L-lactate dehydrogenase 100.0 4.9E-65 1.7E-69 465.7 20.2 272 3-291 40-331 (331)
3 2x0j_A Malate dehydrogenase; o 100.0 7.8E-64 2.7E-68 450.5 24.2 264 1-287 19-291 (294)
4 3vku_A L-LDH, L-lactate dehydr 100.0 2.1E-64 7.1E-69 460.7 19.7 272 2-288 29-316 (326)
5 1mld_A Malate dehydrogenase; o 100.0 2.6E-62 9E-67 446.6 32.7 291 2-294 21-312 (314)
6 3nep_X Malate dehydrogenase; h 100.0 1.2E-63 4.2E-68 454.0 22.6 278 2-294 20-310 (314)
7 3pqe_A L-LDH, L-lactate dehydr 100.0 2.9E-63 9.9E-68 453.7 22.2 272 2-288 25-313 (326)
8 3p7m_A Malate dehydrogenase; p 100.0 3.3E-62 1.1E-66 446.4 28.8 276 3-294 26-321 (321)
9 1oju_A MDH, malate dehydrogena 100.0 1.4E-62 4.9E-67 443.4 25.8 262 3-287 21-291 (294)
10 3tl2_A Malate dehydrogenase; c 100.0 3.8E-62 1.3E-66 444.6 25.9 270 3-287 29-313 (315)
11 3gvi_A Malate dehydrogenase; N 100.0 3.2E-62 1.1E-66 446.4 25.3 276 3-294 28-321 (324)
12 3fi9_A Malate dehydrogenase; s 100.0 2.5E-61 8.7E-66 443.1 21.1 274 3-290 30-319 (343)
13 2zqz_A L-LDH, L-lactate dehydr 100.0 1.7E-60 5.7E-65 436.3 25.8 277 3-294 30-322 (326)
14 1ez4_A Lactate dehydrogenase; 100.0 1.3E-60 4.3E-65 435.9 24.6 277 3-294 26-317 (318)
15 7mdh_A Protein (malate dehydro 100.0 9.9E-60 3.4E-64 434.8 29.2 279 2-293 53-357 (375)
16 2xxj_A L-LDH, L-lactate dehydr 100.0 1.2E-59 4E-64 428.3 26.8 272 2-288 20-308 (310)
17 2d4a_B Malate dehydrogenase; a 100.0 2E-59 6.9E-64 426.4 25.7 273 3-292 20-306 (308)
18 5mdh_A Malate dehydrogenase; o 100.0 2.4E-59 8.2E-64 429.2 25.0 282 2-294 24-332 (333)
19 1smk_A Malate dehydrogenase, g 100.0 1.4E-57 4.9E-62 417.5 31.5 285 3-293 30-319 (326)
20 4h7p_A Malate dehydrogenase; s 100.0 2.5E-58 8.5E-63 423.0 26.1 271 8-288 56-343 (345)
21 3ldh_A Lactate dehydrogenase; 100.0 1.2E-60 4.1E-65 435.2 10.6 259 2-287 41-327 (330)
22 1y6j_A L-lactate dehydrogenase 100.0 4.7E-58 1.6E-62 419.2 26.6 273 2-289 27-316 (318)
23 3d0o_A L-LDH 1, L-lactate dehy 100.0 2.9E-58 9.9E-63 420.5 23.6 272 3-289 27-314 (317)
24 1o6z_A MDH, malate dehydrogena 100.0 4.9E-57 1.7E-61 410.1 27.8 271 3-288 22-302 (303)
25 1ur5_A Malate dehydrogenase; o 100.0 1E-56 3.6E-61 408.9 26.8 272 3-289 23-307 (309)
26 1ldn_A L-lactate dehydrogenase 100.0 6E-57 2.1E-61 411.7 23.5 271 3-288 27-314 (316)
27 2i6t_A Ubiquitin-conjugating e 100.0 8.8E-56 3E-60 401.0 27.2 261 3-287 35-300 (303)
28 1hye_A L-lactate/malate dehydr 100.0 5.6E-56 1.9E-60 404.9 24.7 275 2-289 21-311 (313)
29 1t2d_A LDH-P, L-lactate dehydr 100.0 1.7E-54 5.7E-59 396.2 26.5 270 3-289 25-317 (322)
30 2hjr_A Malate dehydrogenase; m 100.0 6E-54 2E-58 393.6 24.9 272 3-289 35-324 (328)
31 1guz_A Malate dehydrogenase; o 100.0 4.5E-53 1.6E-57 385.2 29.0 273 4-290 22-307 (310)
32 1pzg_A LDH, lactate dehydrogen 100.0 2E-53 7E-58 390.5 26.1 273 4-290 31-326 (331)
33 1b8p_A Protein (malate dehydro 100.0 1.3E-52 4.5E-57 385.1 28.3 274 8-292 37-328 (329)
34 2v6b_A L-LDH, L-lactate dehydr 100.0 1.1E-52 3.6E-57 381.8 24.9 267 2-288 20-302 (304)
35 1a5z_A L-lactate dehydrogenase 100.0 5.4E-50 1.9E-54 366.3 27.2 269 4-289 22-308 (319)
36 1hyh_A L-hicdh, L-2-hydroxyiso 100.0 1.2E-48 4E-53 356.0 18.6 270 4-291 23-308 (309)
37 2ewd_A Lactate dehydrogenase,; 100.0 2.7E-46 9.3E-51 341.6 28.2 267 9-289 30-314 (317)
38 1up7_A 6-phospho-beta-glucosid 100.0 9.6E-44 3.3E-48 334.5 22.0 268 4-290 27-377 (417)
39 1y7t_A Malate dehydrogenase; N 100.0 5.6E-42 1.9E-46 314.2 28.4 274 8-291 36-324 (327)
40 1s6y_A 6-phospho-beta-glucosid 100.0 2.5E-41 8.7E-46 320.8 24.1 268 4-289 32-399 (450)
41 1lld_A L-lactate dehydrogenase 100.0 4.2E-39 1.4E-43 293.7 28.0 269 3-287 28-316 (319)
42 1u8x_X Maltose-6'-phosphate gl 100.0 6.5E-40 2.2E-44 312.4 17.0 268 5-288 54-422 (472)
43 3fef_A Putative glucosidase LP 100.0 1.1E-30 3.6E-35 247.0 21.3 262 7-288 33-403 (450)
44 1obb_A Maltase, alpha-glucosid 100.0 1E-27 3.5E-32 228.3 20.6 265 7-288 32-433 (480)
45 3u95_A Glycoside hydrolase, fa 100.0 1.1E-27 3.8E-32 228.9 19.8 251 5-274 29-407 (477)
46 3g79_A NDP-N-acetyl-D-galactos 83.2 4.9 0.00017 37.8 9.1 92 9-108 45-158 (478)
47 3k96_A Glycerol-3-phosphate de 77.2 9.7 0.00033 34.2 8.8 77 8-103 53-138 (356)
48 3gg2_A Sugar dehydrogenase, UD 76.3 10 0.00034 35.3 8.8 60 41-106 70-131 (450)
49 2o3j_A UDP-glucose 6-dehydroge 76.0 1.9 6.4E-05 40.6 3.7 67 41-108 78-146 (481)
50 1dlj_A UDP-glucose dehydrogena 73.7 1.6 5.4E-05 40.1 2.5 63 41-108 65-128 (402)
51 4a7p_A UDP-glucose dehydrogena 65.8 14 0.00049 34.2 7.3 63 40-107 75-139 (446)
52 3oj0_A Glutr, glutamyl-tRNA re 62.8 8.5 0.00029 29.2 4.4 67 10-103 47-115 (144)
53 3ado_A Lambda-crystallin; L-gu 59.9 10 0.00034 33.6 4.8 66 40-126 78-144 (319)
54 3zwc_A Peroxisomal bifunctiona 59.8 15 0.00051 36.5 6.5 64 41-126 386-450 (742)
55 1mv8_A GMD, GDP-mannose 6-dehy 56.5 11 0.00039 34.6 4.8 62 41-105 68-131 (436)
56 3pid_A UDP-glucose 6-dehydroge 55.3 32 0.0011 31.7 7.6 64 40-108 100-164 (432)
57 3tri_A Pyrroline-5-carboxylate 53.7 20 0.00068 30.7 5.6 89 7-126 29-119 (280)
58 1zcj_A Peroxisomal bifunctiona 53.1 45 0.0015 30.9 8.3 48 41-105 107-155 (463)
59 4h08_A Putative hydrolase; GDS 50.1 46 0.0016 26.1 7.0 49 48-101 73-122 (200)
60 2i9x_A Putative septation prot 49.4 39 0.0013 23.8 5.5 41 235-278 39-79 (87)
61 3vtf_A UDP-glucose 6-dehydroge 48.1 24 0.00083 32.7 5.5 64 40-106 88-153 (444)
62 4e12_A Diketoreductase; oxidor 47.2 36 0.0012 29.0 6.2 47 41-101 77-124 (283)
63 3ggo_A Prephenate dehydrogenas 47.1 26 0.00089 30.6 5.4 46 4-57 55-102 (314)
64 1x0v_A GPD-C, GPDH-C, glycerol 47.1 75 0.0026 27.6 8.5 46 41-102 82-128 (354)
65 3dci_A Arylesterase; SGNH_hydr 47.0 31 0.001 28.1 5.6 51 48-101 100-157 (232)
66 3e8x_A Putative NAD-dependent 45.8 56 0.0019 26.4 7.1 56 41-99 76-131 (236)
67 2raf_A Putative dinucleotide-b 45.2 34 0.0012 27.7 5.5 51 33-102 44-94 (209)
68 4fgw_A Glycerol-3-phosphate de 43.8 31 0.0011 31.4 5.4 51 31-100 102-153 (391)
69 1f0y_A HCDH, L-3-hydroxyacyl-C 43.6 35 0.0012 29.3 5.6 46 41-100 92-138 (302)
70 3dtt_A NADP oxidoreductase; st 42.8 25 0.00086 29.3 4.4 45 42-102 83-128 (245)
71 2ia9_A Putative septation prot 40.7 60 0.002 23.5 5.5 41 235-278 39-79 (100)
72 2i9z_A Putative septation prot 40.6 60 0.002 23.7 5.5 41 235-278 39-79 (105)
73 3npg_A Uncharacterized DUF364 40.3 14 0.00049 31.4 2.4 73 45-140 160-232 (249)
74 1es9_A PAF-AH, platelet-activa 39.7 57 0.0019 26.3 6.1 47 49-100 93-139 (232)
75 1y1p_A ARII, aldehyde reductas 39.4 97 0.0033 26.3 7.9 58 42-100 76-133 (342)
76 3qha_A Putative oxidoreductase 39.2 63 0.0021 27.6 6.5 66 8-99 39-106 (296)
77 2q0q_A ARYL esterase; SGNH hyd 38.9 42 0.0015 26.5 5.1 49 48-100 82-140 (216)
78 2dpo_A L-gulonate 3-dehydrogen 38.6 39 0.0013 29.7 5.1 45 41-99 79-124 (319)
79 2w9x_A AXE2A, CJCE2B, putative 38.0 92 0.0031 27.5 7.6 54 48-101 235-296 (366)
80 2c29_D Dihydroflavonol 4-reduc 37.8 99 0.0034 26.4 7.7 59 42-100 70-129 (337)
81 2rcy_A Pyrroline carboxylate r 37.2 26 0.00089 29.2 3.6 46 42-103 51-96 (262)
82 1jay_A Coenzyme F420H2:NADP+ o 36.9 22 0.00076 28.5 3.0 45 42-102 57-101 (212)
83 4id9_A Short-chain dehydrogena 36.7 64 0.0022 27.7 6.3 56 43-99 71-126 (347)
84 3k6j_A Protein F01G10.3, confi 36.6 42 0.0014 31.2 5.2 42 41-97 123-165 (460)
85 1gml_A T-complex protein 1 sub 36.4 1.4E+02 0.0048 23.6 7.8 89 45-145 23-122 (178)
86 1ofu_X SULA, hypothetical prot 36.2 99 0.0034 22.9 6.3 44 78-126 17-63 (119)
87 3hwr_A 2-dehydropantoate 2-red 35.6 71 0.0024 27.6 6.4 61 41-126 79-140 (318)
88 2h1q_A Hypothetical protein; Z 35.2 23 0.00079 30.5 2.9 76 44-143 181-256 (270)
89 2ew2_A 2-dehydropantoate 2-red 34.8 93 0.0032 26.2 7.0 57 45-124 70-127 (316)
90 2y0c_A BCEC, UDP-glucose dehyd 34.7 27 0.00093 32.6 3.6 52 40-97 75-127 (478)
91 4huj_A Uncharacterized protein 34.1 39 0.0013 27.5 4.1 42 44-102 76-117 (220)
92 3l5o_A Uncharacterized protein 34.0 23 0.0008 30.5 2.8 73 44-141 181-254 (270)
93 4h31_A Otcase, ornithine carba 33.4 34 0.0012 30.8 3.8 16 41-56 242-257 (358)
94 2b0j_A 5,10-methenyltetrahydro 33.2 30 0.001 30.4 3.2 60 34-113 129-188 (358)
95 3pef_A 6-phosphogluconate dehy 33.0 80 0.0027 26.6 6.2 40 8-57 25-65 (287)
96 2wtb_A MFP2, fatty acid multif 33.0 38 0.0013 33.5 4.4 46 41-103 384-430 (725)
97 2x4g_A Nucleoside-diphosphate- 32.9 62 0.0021 27.7 5.5 58 42-100 70-127 (342)
98 1eq2_A ADP-L-glycero-D-mannohe 32.5 1.1E+02 0.0039 25.4 7.1 55 43-99 57-116 (310)
99 3sxp_A ADP-L-glycero-D-mannohe 32.4 67 0.0023 27.9 5.7 55 43-99 83-138 (362)
100 2x41_A Beta-glucosidase; hydro 32.2 17 0.00058 36.0 1.8 59 46-104 441-506 (721)
101 3ehe_A UDP-glucose 4-epimerase 32.0 1.6E+02 0.0056 24.6 8.1 113 42-157 56-172 (313)
102 3b1f_A Putative prephenate deh 31.7 42 0.0015 28.4 4.1 69 8-100 32-103 (290)
103 3h2s_A Putative NADH-flavin re 31.7 50 0.0017 26.3 4.4 48 45-99 58-105 (224)
104 3dhn_A NAD-dependent epimerase 31.6 44 0.0015 26.7 4.1 53 42-99 60-112 (227)
105 3gt0_A Pyrroline-5-carboxylate 31.2 29 0.00099 28.8 2.9 69 8-102 30-101 (247)
106 2rh8_A Anthocyanidin reductase 30.9 78 0.0027 27.0 5.8 59 42-100 73-132 (338)
107 1yj8_A Glycerol-3-phosphate de 30.6 57 0.0019 28.9 4.9 46 41-102 95-145 (375)
108 3m2p_A UDP-N-acetylglucosamine 30.5 71 0.0024 27.0 5.4 112 42-158 55-168 (311)
109 3d1l_A Putative NADP oxidoredu 30.3 89 0.003 25.9 5.9 43 42-100 61-104 (266)
110 3ay3_A NAD-dependent epimerase 30.2 1.5E+02 0.0051 24.3 7.4 54 43-99 57-110 (267)
111 1x7d_A Ornithine cyclodeaminas 30.0 62 0.0021 28.7 5.0 49 6-58 153-203 (350)
112 2hsj_A Putative platelet activ 29.9 1.6E+02 0.0053 22.9 7.2 48 49-100 85-133 (214)
113 2q3e_A UDP-glucose 6-dehydroge 29.7 38 0.0013 31.3 3.7 66 41-107 74-141 (467)
114 3pzy_A MOG; ssgcid, seattle st 29.3 37 0.0013 26.7 3.0 17 45-61 61-78 (164)
115 2x6t_A ADP-L-glycero-D-manno-h 29.3 1.3E+02 0.0043 26.0 7.0 49 49-99 115-163 (357)
116 2h78_A Hibadh, 3-hydroxyisobut 29.2 1.1E+02 0.0037 26.0 6.4 40 9-57 28-67 (302)
117 3dc7_A Putative uncharacterize 28.9 38 0.0013 27.3 3.2 51 48-101 81-139 (232)
118 3jte_A Response regulator rece 28.4 1.4E+02 0.0048 21.3 6.2 79 9-103 5-89 (143)
119 3eag_A UDP-N-acetylmuramate:L- 28.1 78 0.0027 27.5 5.3 109 8-125 29-142 (326)
120 3l9w_A Glutathione-regulated p 28.1 2.4E+02 0.0081 25.5 8.7 79 47-149 66-145 (413)
121 4as2_A Phosphorylcholine phosp 27.7 29 0.00098 30.7 2.3 47 77-126 147-194 (327)
122 1fxw_F Alpha2, platelet-activa 27.2 2.1E+02 0.0071 22.8 7.6 47 49-100 94-140 (229)
123 3r6d_A NAD-dependent epimerase 26.7 1.1E+02 0.0038 24.3 5.7 43 42-99 66-108 (221)
124 2g5c_A Prephenate dehydrogenas 26.4 1.2E+02 0.004 25.4 6.0 42 8-57 27-70 (281)
125 3ueb_A Putative uncharacterize 25.4 1.1E+02 0.0039 21.6 4.5 37 256-295 9-45 (110)
126 3ghy_A Ketopantoate reductase 25.3 68 0.0023 27.9 4.4 44 41-101 63-107 (335)
127 2hun_A 336AA long hypothetical 24.9 61 0.0021 27.7 4.0 57 43-99 69-127 (336)
128 2e8b_A Probable molybdopterin- 24.3 2.2E+02 0.0076 22.3 7.1 50 50-101 15-64 (201)
129 1bb1_B Designed, thermostable 24.0 1E+02 0.0034 17.1 3.9 22 268-289 8-29 (36)
130 3i83_A 2-dehydropantoate 2-red 23.8 1.2E+02 0.004 26.2 5.6 66 41-129 63-130 (320)
131 2c5a_A GDP-mannose-3', 5'-epim 23.6 1.9E+02 0.0066 25.2 7.2 56 43-99 87-145 (379)
132 2bka_A CC3, TAT-interacting pr 23.5 81 0.0028 25.4 4.3 56 42-99 77-132 (242)
133 3ew7_A LMO0794 protein; Q8Y8U8 22.6 1.4E+02 0.0048 23.3 5.5 47 45-99 57-103 (221)
134 3rft_A Uronate dehydrogenase; 22.5 2.2E+02 0.0077 23.3 7.1 55 42-99 57-111 (267)
135 3r7w_B Gtpase2, GTP-binding pr 22.4 1.5E+02 0.0051 26.2 6.0 52 46-105 69-120 (331)
136 1orr_A CDP-tyvelose-2-epimeras 22.2 66 0.0022 27.5 3.6 57 43-99 65-125 (347)
137 2p4h_X Vestitone reductase; NA 22.1 1.2E+02 0.0043 25.4 5.4 57 42-99 67-125 (322)
138 4e7p_A Response regulator; DNA 21.6 2.3E+02 0.0079 20.4 6.7 79 8-103 21-106 (150)
139 2a35_A Hypothetical protein PA 21.6 93 0.0032 24.4 4.2 49 50-99 66-114 (215)
140 3h9u_A Adenosylhomocysteinase; 21.5 75 0.0026 29.3 3.9 44 42-102 259-302 (436)
141 1bb1_A Designed, thermostable 21.5 1.2E+02 0.0039 16.8 3.9 25 268-292 8-32 (36)
142 1zej_A HBD-9, 3-hydroxyacyl-CO 21.4 1E+02 0.0034 26.6 4.6 44 9-57 36-81 (293)
143 3kcn_A Adenylate cyclase homol 21.1 2.1E+02 0.0072 20.6 6.0 76 8-103 5-88 (151)
144 1hdo_A Biliverdin IX beta redu 21.0 2.4E+02 0.0081 21.5 6.6 52 42-99 60-111 (206)
145 3zyz_A Beta-D-glucoside glucoh 21.0 27 0.00093 34.5 0.9 59 45-105 423-490 (713)
146 3oh8_A Nucleoside-diphosphate 21.0 1.6E+02 0.0055 27.2 6.3 56 44-99 196-254 (516)
147 2w3g_A DOSS, two component sen 21.0 2.3E+02 0.0077 20.0 6.7 47 243-289 96-147 (153)
148 3hn2_A 2-dehydropantoate 2-red 20.4 1.1E+02 0.0036 26.3 4.6 59 45-126 65-124 (312)
149 3uhf_A Glutamate racemase; str 20.4 4E+02 0.014 22.6 8.6 53 44-101 44-97 (274)
150 3mmh_A FRMSR, methionine-R-sul 20.3 2.3E+02 0.008 21.9 6.2 44 243-286 114-161 (167)
151 3pdu_A 3-hydroxyisobutyrate de 20.1 1.5E+02 0.005 25.0 5.4 40 8-57 25-65 (287)
No 1
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=100.00 E-value=1.3e-66 Score=473.22 Aligned_cols=286 Identities=53% Similarity=0.827 Sum_probs=257.7
Q ss_pred CCcCeEEEEeCCC-chhHHHhhhCCCCCCeEEEeeCCCchhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q 022546 5 PLVSSLSLYDIAN-TPGVAADVSHINSPAQVEGYAGEEQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCT 83 (295)
Q Consensus 5 ~~~~ei~L~D~~~-~~~~~~Dl~~~~~~~~v~~~~~t~d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~i~~ 83 (295)
++++||+|+|+++ +.|+++||+|+..+.+++.+.++++ +++++|||+||+++|.|++|||+|+|++.+|++|++++++
T Consensus 25 ~~~~el~L~Di~~~~~G~a~Dl~~~~~~~~v~~~~~~~~-~~~~~~aDivii~ag~~rkpG~~R~dll~~N~~I~~~i~~ 103 (312)
T 3hhp_A 25 PSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDA-TPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQ 103 (312)
T ss_dssp CTTEEEEEECSSTTHHHHHHHHHTSCSSEEEEEECSSCC-HHHHTTCSEEEECCSCSCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCceEEEEecCCCchhHHHHhhCCCCCceEEEecCCCc-HHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 6789999999987 7899999999865556665433334 6999999999999999999999999999999999999999
Q ss_pred HHHhhCCCeEEEEecCCccchHHHHHHHHHHhCCCCCCCeeecchhhHHHHHHHHHhhcCCCCccceEEEeeCC-CCcee
Q 022546 84 AIANYCPHALVNMISNPVNSTVPIAAEVFKKAGTYDEKKLFGVTTLDVVRAKTFYAGKVNVPVAEVNVPVIGGH-AGVTI 162 (295)
Q Consensus 84 ~i~~~~p~a~viv~tNP~d~~t~~~~~~~k~sg~~~~~kviG~t~ld~~R~~~~la~~l~v~~~~v~~~viG~h-g~~~~ 162 (295)
.|+++||+++++++|||+|++|+++++++|++|.+|++||||+|.||++|+++++|+++|++|++|+++||||| |+ ++
T Consensus 104 ~i~~~~p~a~vlvvtNPvd~~t~~a~~~~k~sg~~p~~rv~G~~~LD~~R~~~~la~~lgv~~~~v~~~V~G~Hsg~-t~ 182 (312)
T 3hhp_A 104 QVAKTCPKACIGIITNPVNTTVAIAAEVLKKAGVYDKNKLFGVTTLDIIRSNTFVAELKGKQPGEVEVPVIGGHSGV-TI 182 (312)
T ss_dssp HHHHHCTTSEEEECSSCHHHHHHHHHHHHHHTTCCCTTSEEECCHHHHHHHHHHHHHHHTCCGGGCCCCEEECSSGG-GE
T ss_pred HHHHHCCCcEEEEecCcchhHHHHHHHHHHHcCCCCcceEEEEechhHHHHHHHHHHHhCcChhHcceeEEeccCCC-ce
Confidence 99999999999999999999999977779999944999999999999999999999999999999999999999 65 89
Q ss_pred eeccccCcCCCCCCCHHHHHHHHHHhhchhhhhhhhccCCCcchhhHHHHHHHHHHHHHcCcCCCCceeEEEEeeCCCCC
Q 022546 163 LPLFSQATPKSNNLSDEEIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAVFADACLMGLNGVPDIVECTFVQSSVTE 242 (295)
Q Consensus 163 vp~~s~~~v~~~~~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~s~a~a~~~~i~ai~~~~~~~~~v~~~~~~~g~~~~ 242 (295)
+|+||++ .+.++++++|+++.++++++|++|++.|.|+|+++||+|.|+++++++|+.+.++++.++++++++|+.+.
T Consensus 183 vp~~S~~--~g~~~~~~~~~~i~~~v~~~g~eIi~~k~g~gst~~s~a~a~~~~~~ai~~~l~~~~~v~~~s~~~g~g~~ 260 (312)
T 3hhp_A 183 LPLLSQV--PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGEQGVVECAYVEGDGQY 260 (312)
T ss_dssp EECGGGC--TTCCCCHHHHHHHHHHHHTHHHHHHHHTTTSCCCCHHHHHHHHHHHHHHHHHHTTCSSCEEEEEEECCCSS
T ss_pred eeecccC--CCCCCCHHHHHHHHHHHHhhhHHHHhhccCCCCchhHHHHHHHHHHHHHHHHcCCCCceEEEEEecCCCCc
Confidence 9999998 44568888999999999999999999776779999999999999999995433334468888888876556
Q ss_pred ccEEEEeEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 022546 243 LPFFASKVRLGKNGADEVLGLGPLSDYEKQGLESLKPELKASIEKGIQFANR 294 (295)
Q Consensus 243 ~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~~~~~~~~~ 294 (295)
++|||+||++|++|+++++++++|+++|+++|++|++.|+++++++++|+..
T Consensus 261 ~v~~s~P~~~g~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~i~~g~~~~~~ 312 (312)
T 3hhp_A 261 ARFFSQPLLLGKNGVEERKSIGTLSAFEQNALEGMLDTLKKDIALGEEFVNK 312 (312)
T ss_dssp CSEEEEEEEEETTEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred ceEEEeEEEEeCCEEEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 8999999999999999999977999999999999999999999999999863
No 2
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=100.00 E-value=4.9e-65 Score=465.72 Aligned_cols=272 Identities=24% Similarity=0.384 Sum_probs=244.4
Q ss_pred CCCCcCeEEEEeCCC--chhHHHhhhCCC-CC--CeEEEeeCCCchhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHH
Q 022546 3 LDPLVSSLSLYDIAN--TPGVAADVSHIN-SP--AQVEGYAGEEQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGI 77 (295)
Q Consensus 3 ~~~~~~ei~L~D~~~--~~~~~~Dl~~~~-~~--~~v~~~~~t~d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i 77 (295)
++++++||+|+|+++ ++|+++||+|+. +. +.+. .++|+ ++++|||+||+++|.|++|||+|+|++.+|++|
T Consensus 40 ~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~---~~~d~-~~~~~aDiVvi~aG~~~kpG~tR~dL~~~N~~I 115 (331)
T 4aj2_A 40 MKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIV---SSKDY-SVTANSKLVIITAGARQQEGESRLNLVQRNVNI 115 (331)
T ss_dssp HTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEE---ECSSG-GGGTTEEEEEECCSCCCCTTCCGGGGHHHHHHH
T ss_pred hCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEE---EcCCH-HHhCCCCEEEEccCCCCCCCccHHHHHHHHHHH
Confidence 467889999999987 799999999985 22 2332 23564 789999999999999999999999999999999
Q ss_pred HHHHHHHHHhhCCCeEEEEecCCccchHHHHHHHHHHhCCCCCCCeeec-chhhHHHHHHHHHhhcCCCCccceEEEeeC
Q 022546 78 VKSLCTAIANYCPHALVNMISNPVNSTVPIAAEVFKKAGTYDEKKLFGV-TTLDVVRAKTFYAGKVNVPVAEVNVPVIGG 156 (295)
Q Consensus 78 ~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~k~sg~~~~~kviG~-t~ld~~R~~~~la~~l~v~~~~v~~~viG~ 156 (295)
++++++.|+++||+||++++|||+|++|+++ +|.+| ||++||||+ |.||++|+++++|+++|++|++|+++||||
T Consensus 116 ~~~i~~~i~~~~p~a~vlvvtNPvdi~t~~~---~k~sg-~p~~rviG~gt~LD~~R~~~~la~~lgv~~~~V~~~ViGe 191 (331)
T 4aj2_A 116 FKFIIPNVVKYSPQCKLLIVSNPVDILTYVA---WKISG-FPKNRVIGSGCNLDSARFRYLMGERLGVHPLSCHGWVLGE 191 (331)
T ss_dssp HHHHHHHHHHHCTTCEEEECSSSHHHHHHHH---HHHHC-CCGGGEEECTTHHHHHHHHHHHHHHHTSCGGGCBCCEEBC
T ss_pred HHHHHHHHHHHCCCeEEEEecChHHHHHHHH---HHHhC-CCHHHEEeeccccHHHHHHHHHHHHhCCCHHHCEEeEEec
Confidence 9999999999999999999999999999987 88998 999999999 999999999999999999999999999999
Q ss_pred CCCceeeeccccCcCCCCC-----------CCHHHHHHHHHHhhchhhhhhhhccCCCcchhhHHHHHHHHHHHHHcCcC
Q 022546 157 HAGVTILPLFSQATPKSNN-----------LSDEEIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAVFADACLMGLN 225 (295)
Q Consensus 157 hg~~~~vp~~s~~~v~~~~-----------~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~s~a~a~~~~i~ai~~~~~ 225 (295)
||+ ++||+||++++++.+ +++++|+++.++++++|++|++. ||+++||+|.++++++++|++|.+
T Consensus 192 HG~-s~vp~~S~~~v~G~p~~~~~~~~~~~~~~~~~~~i~~~v~~~g~eIi~~---kg~t~~a~a~a~a~~~~ail~d~~ 267 (331)
T 4aj2_A 192 HGD-SSVPVWSGVNVAGVSLKSLNPQLGTDADKEQWKDVHKQVVDSAYEVIKL---KGYTSWAIGLSVADLAESIMKNLR 267 (331)
T ss_dssp SST-TCEECGGGCEETTEEHHHHCTTTTSTTCTTCTHHHHHHHHHHHHHHHHH---HSSCCHHHHHHHHHHHHHHHTTCC
T ss_pred CCC-ceeEeeecCeECCEEHHHHHhhccCCCCHHHHHHHHHHHHHhHHHHhhc---CCCCchhHHHHHHHHHHHHHhCCC
Confidence 999 899999999886521 34567899999999999999995 478999999999999999999965
Q ss_pred CCCceeEEE-EeeCCC--CCccEEEEeEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHHhhh
Q 022546 226 GVPDIVECT-FVQSSV--TELPFFASKVRLGKNGADEVLGLGPLSDYEKQGLESLKPELKASIEKGIQF 291 (295)
Q Consensus 226 ~~~~v~~~~-~~~g~~--~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~~~~~~ 291 (295)
.++|++ +++|+| ++++|||+||++|++|+++++++ +|+++|+++|++|++.|++ +.++++|
T Consensus 268 ---~~~~vs~~~~g~ygi~~~v~~s~P~~lg~~Gv~~iv~l-~L~~~E~~~l~~s~~~l~~-~~~~~~~ 331 (331)
T 4aj2_A 268 ---RVHPISTMIKGLYGIKEDVFLSVPCILGQNGISDVVKV-TLTPDEEARLKKSADTLWG-IQKELQF 331 (331)
T ss_dssp ---EEEEEEEECTTGGGCCSCCEEEEEEEEETTEEEEEECC-CCCHHHHHHHHHHHHHHHH-HHTTCCC
T ss_pred ---CeEEEEEecCCccCCcCceEEEEEEEEcCCeeEEEccC-CCCHHHHHHHHHHHHHHHH-HHhhcCC
Confidence 578876 889998 57999999999999999999997 9999999999999999997 5555543
No 3
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=100.00 E-value=7.8e-64 Score=450.53 Aligned_cols=264 Identities=28% Similarity=0.400 Sum_probs=237.8
Q ss_pred CCCCCCcCeEEEEeCCC--chhHHHhhhCCC----CCCeEEEeeCCCchhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHH
Q 022546 1 MKLDPLVSSLSLYDIAN--TPGVAADVSHIN----SPAQVEGYAGEEQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNIN 74 (295)
Q Consensus 1 l~~~~~~~ei~L~D~~~--~~~~~~Dl~~~~----~~~~v~~~~~t~d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n 74 (295)
|+++++++||+|+|+++ ++|+++||+|+. ..+++.. ++| +++++|||+||+++|.||+|||+|+|++..|
T Consensus 19 l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~---~~d-~~~~~~aDvVvitAG~prkpGmtR~dLl~~N 94 (294)
T 2x0j_A 19 CLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVG---GAD-YSLLKGSEIIVVTAGLARKPGMTRLDLAHKN 94 (294)
T ss_dssp HHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEE---ESC-GGGGTTCSEEEECCCCCCCSSSCHHHHHHHH
T ss_pred HHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEec---CCC-HHHhCCCCEEEEecCCCCCCCCchHHHHHHH
Confidence 35678999999999988 899999999964 2234443 345 5899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEEecCCccchHHHHHHHHHHhCCCCCCCeeec-chhhHHHHHHHHHhhcCCCCccceEEE
Q 022546 75 AGIVKSLCTAIANYCPHALVNMISNPVNSTVPIAAEVFKKAGTYDEKKLFGV-TTLDVVRAKTFYAGKVNVPVAEVNVPV 153 (295)
Q Consensus 75 ~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~k~sg~~~~~kviG~-t~ld~~R~~~~la~~l~v~~~~v~~~v 153 (295)
++|++++++.|+++||+++++++|||+|+||+++ +|.+| +|++|+||+ |.||++||+++|++++++++. +++|
T Consensus 95 a~I~~~i~~~i~~~~p~aivlvvsNPvd~~t~i~---~k~sg-~p~~rvig~gT~LDs~R~~~~l~~~~~~~~~--~~~V 168 (294)
T 2x0j_A 95 AGIIKDIAKKIVENAPESKILVVTNPMDVMTYIM---WKESG-KPRNEVFGMGNQLDSQRLKERLYNAGARNIR--RAWI 168 (294)
T ss_dssp HHHHHHHHHHHHTTSTTCEEEECSSSHHHHHHHH---HHHSS-CCTTSEEECCHHHHHHHHHHHHHHTTCEEEC--CCCE
T ss_pred HHHHHHHHHHHHhcCCceEEEEecCcchhhHHhh---HHHcC-CChhhEEEeeeEEeHHHHHHHHhhcccCCcc--eeEE
Confidence 9999999999999999999999999999999987 89999 999999999 999999999999999886653 7999
Q ss_pred eeCCCCceeeeccccCcCCCCCCCHHHHHHHHHHhhchhhhhhhhccCCCcchhhHHHHHHHHHHHHHcCcCCCCceeEE
Q 022546 154 IGGHAGVTILPLFSQATPKSNNLSDEEIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAVFADACLMGLNGVPDIVEC 233 (295)
Q Consensus 154 iG~hg~~~~vp~~s~~~v~~~~~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~s~a~a~~~~i~ai~~~~~~~~~v~~~ 233 (295)
||+||+ +++|+||++++.+. .+++++.++++++|+||++. ||+++||+|.++++++++|+++++ .++|+
T Consensus 169 ~G~HGd-t~vp~~S~~~v~g~----~~~~~i~~~~~~~g~eIi~~---kGst~~a~a~a~~~~~~ail~d~~---~v~~~ 237 (294)
T 2x0j_A 169 IGEHGD-SMFVAKSLADFDGE----VDWEAVENDVRFVAAEVIKR---KGATIFGPAVAIYRMVKAVVEDTG---EIIPT 237 (294)
T ss_dssp EBCSST-TCEECGGGCCEESC----CCHHHHHHHHHTHHHHHHHH---HSSCCHHHHHHHHHHHHHHHTTCC---CEEEE
T ss_pred EecCCC-cEEEeeeccCCCCc----hhHHHHHHHHhhhheEEEec---CcccchhHHHHHHHHHHHHHcCCC---cEEEE
Confidence 999999 99999999998663 24667888999999999994 589999999999999999999864 58888
Q ss_pred E-EeeCCC-CCccEEEEeEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 022546 234 T-FVQSSV-TELPFFASKVRLGKNGADEVLGLGPLSDYEKQGLESLKPELKASIEK 287 (295)
Q Consensus 234 ~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~~ 287 (295)
+ +++|+| .+++|||+||++|++|+ +++++ +|+++|+++|++|++.||+.+++
T Consensus 238 s~~l~g~yG~~~v~~s~P~~lg~~Gv-ei~~l-~L~~~E~~~l~~s~~~lk~~i~~ 291 (294)
T 2x0j_A 238 SMILQGEYGIENVAVGVPAKLGKNGA-EVADI-KLSDEEIEKLRNSAKILRERLEE 291 (294)
T ss_dssp EEEEESGGGCEEEEEEEEEEEETTEE-EECCC-CCCHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEecCCCCccEEEEEEEEEeCCEE-EEeCC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence 7 789999 67999999999999998 58887 99999999999999999998864
No 4
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=100.00 E-value=2.1e-64 Score=460.69 Aligned_cols=272 Identities=24% Similarity=0.396 Sum_probs=227.8
Q ss_pred CCCCCcCeEEEEeCCC--chhHHHhhhCCCCC-CeEEEeeCCCchhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHH
Q 022546 2 KLDPLVSSLSLYDIAN--TPGVAADVSHINSP-AQVEGYAGEEQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIV 78 (295)
Q Consensus 2 ~~~~~~~ei~L~D~~~--~~~~~~Dl~~~~~~-~~v~~~~~t~d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~ 78 (295)
++.++++||+|+|+++ ++|+++||+|+... ..++.++ ++ +++++|||+||+++|.|++|||+|++++.+|++|+
T Consensus 29 ~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~--~~-~~a~~~aDiVvi~ag~~~kpG~tR~dL~~~N~~I~ 105 (326)
T 3vku_A 29 VLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYS--AE-YSDAKDADLVVITAGAPQKPGETRLDLVNKNLKIL 105 (326)
T ss_dssp HHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE--CC-GGGGTTCSEEEECCCCC----------------CH
T ss_pred HhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEE--Cc-HHHhcCCCEEEECCCCCCCCCchHHHHHHHHHHHH
Confidence 3567889999999987 79999999998631 2444443 34 68999999999999999999999999999999999
Q ss_pred HHHHHHHHhhCCCeEEEEecCCccchHHHHHHHHHHhCCCCCCCeeec-chhhHHHHHHHHHhhcCCCCccceEEEeeCC
Q 022546 79 KSLCTAIANYCPHALVNMISNPVNSTVPIAAEVFKKAGTYDEKKLFGV-TTLDVVRAKTFYAGKVNVPVAEVNVPVIGGH 157 (295)
Q Consensus 79 ~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~k~sg~~~~~kviG~-t~ld~~R~~~~la~~l~v~~~~v~~~viG~h 157 (295)
+++++.|+++||+||++++|||+|++|+++ +|.+| ||++||||+ |.||++|+++++|+++|++|++|+++|||||
T Consensus 106 ~~i~~~i~~~~p~a~ilvvtNPvdi~t~~~---~k~~g-~p~~rviG~gt~LD~~R~~~~la~~lgv~~~~V~~~ViGeH 181 (326)
T 3vku_A 106 KSIVDPIVDSGFNGIFLVAANPVDILTYAT---WKLSG-FPKNRVVGSGTSLDTARFRQSIAKMVNVDARSVHAYIMGEH 181 (326)
T ss_dssp HHHHHHHHTTTCCSEEEECSSSHHHHHHHH---HHHHC-CCGGGEEECTTHHHHHHHHHHHHHHHTSCGGGEECCEEBSS
T ss_pred HHHHHHHHhcCCceEEEEccCchHHHHHHH---HHhcC-CCHHHeeeecccCcHHHHHHHHHHHhCCCHHHCeEEEEcCC
Confidence 999999999999999999999999999987 78898 999999999 9999999999999999999999999999999
Q ss_pred CCceeeeccccCcCCCCCC----------CHHHHHHHHHHhhchhhhhhhhccCCCcchhhHHHHHHHHHHHHHcCcCCC
Q 022546 158 AGVTILPLFSQATPKSNNL----------SDEEIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAVFADACLMGLNGV 227 (295)
Q Consensus 158 g~~~~vp~~s~~~v~~~~~----------~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~s~a~a~~~~i~ai~~~~~~~ 227 (295)
|+ ++||+||++++++.++ ++++++++.++++++|++|++. ||+++||+|.++++++++|++|.+
T Consensus 182 Gd-t~vp~~S~a~v~g~pl~~~~~~~~~~~~~~~~~i~~~v~~~g~eIi~~---kG~t~~a~a~a~~~~~~ail~~~~-- 255 (326)
T 3vku_A 182 GD-TEFPVWSHANIGGVTIAEWVKAHPEIKEDKLVKMFEDVRNKAYEIIKL---KGATFYGIATALARISKAILNDEN-- 255 (326)
T ss_dssp ST-TCEECGGGCEETTEEHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHHH---HSCCCHHHHHHHHHHHHHHHTTCC--
T ss_pred CC-eeEEeeeccccCCEEHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhc---CCCchHHHHHHHHHHHHHHhcCCC--
Confidence 99 9999999999976432 4567899999999999999994 589999999999999999999853
Q ss_pred CceeEEE-EeeCCC-CCccEEEEeEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 022546 228 PDIVECT-FVQSSV-TELPFFASKVRLGKNGADEVLGLGPLSDYEKQGLESLKPELKASIEKG 288 (295)
Q Consensus 228 ~~v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~~~ 288 (295)
.++|++ +++|+| .+++|||+||++|++|+++++++ +|+++|+++|++|++.|++.+++.
T Consensus 256 -~v~~~s~~~~g~yg~~~v~~s~P~~lg~~Gv~~iv~l-~L~~~E~~~l~~sa~~L~~~~~~~ 316 (326)
T 3vku_A 256 -AVLPLSVYMDGQYGLNDIYIGTPAVINRNGIQNILEI-PLTDHEEESMQKSASQLKKVLTDA 316 (326)
T ss_dssp -EEEEEEEEEEEGGGEEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHCC----
T ss_pred -ceEEEEeeccCccCCCceEEEEEEEEcCCceEEEecC-CCCHHHHHHHHHHHHHHHHHHHHH
Confidence 688886 889998 56999999999999999999998 999999999999999999888765
No 5
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=100.00 E-value=2.6e-62 Score=446.59 Aligned_cols=291 Identities=57% Similarity=0.909 Sum_probs=264.2
Q ss_pred CCCCCcCeEEEEeCCCchhHHHhhhCCCCCCeEEEeeCCCchhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHH
Q 022546 2 KLDPLVSSLSLYDIANTPGVAADVSHINSPAQVEGYAGEEQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSL 81 (295)
Q Consensus 2 ~~~~~~~ei~L~D~~~~~~~~~Dl~~~~~~~~v~~~~~t~d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~i 81 (295)
+++++++||+|+|+++++++++||+|+..+.+++.+.+++|+.++++|||+||+++|.|+++|++|.+++.+|+++++++
T Consensus 21 ~~~~~~~ev~L~Di~~~~~~a~dL~~~~~~~~l~~~~~t~d~~~a~~~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i 100 (314)
T 1mld_A 21 KNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATL 100 (314)
T ss_dssp HTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHH
T ss_pred HhCCCCcEEEEEeCCccHHHHHHHhccCcCceEEEecCCCCHHHHhCCCCEEEECCCcCCCCCCcHHHHHHHHHHHHHHH
Confidence 45677899999999888899999999876556776545567878999999999999999999999999999999999999
Q ss_pred HHHHHhhCCCeEEEEecCCccchHHHHHHHHHHhCCCCCCCeeecchhhHHHHHHHHHhhcCCCCccceEEEeeCC-CCc
Q 022546 82 CTAIANYCPHALVNMISNPVNSTVPIAAEVFKKAGTYDEKKLFGVTTLDVVRAKTFYAGKVNVPVAEVNVPVIGGH-AGV 160 (295)
Q Consensus 82 ~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~k~sg~~~~~kviG~t~ld~~R~~~~la~~l~v~~~~v~~~viG~h-g~~ 160 (295)
++.|++++|++|++++|||+|++|+++++++++.+.||++||||+|.||++|+++++|+++|++|++|+++||||| |+
T Consensus 101 ~~~i~~~~p~a~viv~sNPv~~~~~i~~~~~~~~~~~p~~rvig~t~Ld~~r~~~~la~~l~v~~~~v~~~v~G~H~G~- 179 (314)
T 1mld_A 101 TAACAQHCPDAMICIISNPVNSTIPITAEVFKKHGVYNPNKIFGVTTLDIVRANAFVAELKGLDPARVSVPVIGGHAGK- 179 (314)
T ss_dssp HHHHHHHCTTSEEEECSSCHHHHHHHHHHHHHHTTCCCTTSEEECCHHHHHHHHHHHHHHTTCCGGGCBCCEEECSSGG-
T ss_pred HHHHHhhCCCeEEEEECCCcchhHHHHHHHHHHcCCCCcceEEEeecccHHHHHHHHHHHhCcChHhEEEEEccCCCCC-
Confidence 9999999999999999999999998776644444349999999999999999999999999999999999999999 67
Q ss_pred eeeeccccCcCCCCCCCHHHHHHHHHHhhchhhhhhhhccCCCcchhhHHHHHHHHHHHHHcCcCCCCceeEEEEeeCCC
Q 022546 161 TILPLFSQATPKSNNLSDEEIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAVFADACLMGLNGVPDIVECTFVQSSV 240 (295)
Q Consensus 161 ~~vp~~s~~~v~~~~~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~s~a~a~~~~i~ai~~~~~~~~~v~~~~~~~g~~ 240 (295)
+++|+||++++.. .+++++++++.+++++++++|++.|.|+|+++||+|.++++++++|++|+++++.++++++++|+|
T Consensus 180 ~~~p~~s~~~~~~-~~~~~~~~~~~~~v~~~g~eii~~k~~~g~t~~~~a~a~~~~~~ai~~~~~g~~~v~~~~~~~g~y 258 (314)
T 1mld_A 180 TIIPLISQCTPKV-DFPQDQLSTLTGRIQEAGTEVVKAKAGAGSATLSMAYAGARFVFSLVDAMNGKEGVVECSFVKSQE 258 (314)
T ss_dssp GEEECGGGCBSCC-CCCHHHHHHHHHHHHHHHHHHHHHHTTSCSCCHHHHHHHHHHHHHHHHHHHTCTTCEEEEEEECCS
T ss_pred cEeeecccCCCcc-cCCHHHHHHHHHHHHHHHHHHHhhhcCCCCcchhHHHHHHHHHHHHHcCcCCCcceEEEEEeCCcc
Confidence 8999999998543 478888999999999999999998778899999999999999999999977554688888899999
Q ss_pred CCccEEEEeEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 022546 241 TELPFFASKVRLGKNGADEVLGLGPLSDYEKQGLESLKPELKASIEKGIQFANR 294 (295)
Q Consensus 241 ~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~~~~~~~~~ 294 (295)
++++|||+||++|++|+++++++++|+++|+++|++|++.|++.++++++|++.
T Consensus 259 ~~~~~~~~P~~ig~~Gv~~i~~l~~l~~~e~~~l~~s~~~l~~~~~~~~~~~~~ 312 (314)
T 1mld_A 259 TDCPYFSTPLLLGKKGIEKNLGIGKISPFEEKMIAEAIPELKASIKKGEEFVKN 312 (314)
T ss_dssp SSSSEEEEEEEEETTEEEEECCCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCceEEEEEEEEeCCeeEEecCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 889999999999999999998887999999999999999999999999999875
No 6
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=100.00 E-value=1.2e-63 Score=454.02 Aligned_cols=278 Identities=27% Similarity=0.471 Sum_probs=244.7
Q ss_pred CCCCCcCeEEEEeCCC--chhHHHhhhCCCC----CCeEEEeeCCCchhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHH
Q 022546 2 KLDPLVSSLSLYDIAN--TPGVAADVSHINS----PAQVEGYAGEEQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINA 75 (295)
Q Consensus 2 ~~~~~~~ei~L~D~~~--~~~~~~Dl~~~~~----~~~v~~~~~t~d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~ 75 (295)
++++++++|+|+|+++ ++|+++||+|+.+ +.++..+ ++ +++++|||+||+++|.|++|||+|++++.+|+
T Consensus 20 ~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~---~~-~~a~~~aDvVii~ag~~~kpG~~R~dl~~~N~ 95 (314)
T 3nep_X 20 ARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGT---ND-YGPTEDSDVCIITAGLPRSPGMSRDDLLAKNT 95 (314)
T ss_dssp HHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEE---SS-SGGGTTCSEEEECCCC-------CHHHHHHHH
T ss_pred HhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEEC---CC-HHHhCCCCEEEECCCCCCCCCCCHHHHHHhhH
Confidence 3467789999999988 7899999999752 2344432 33 69999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhCCCeEEEEecCCccchHHHHHHHHHHhCCCCCCCeeec-chhhHHHHHHHHHhhcCCCCccceEEEe
Q 022546 76 GIVKSLCTAIANYCPHALVNMISNPVNSTVPIAAEVFKKAGTYDEKKLFGV-TTLDVVRAKTFYAGKVNVPVAEVNVPVI 154 (295)
Q Consensus 76 ~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~k~sg~~~~~kviG~-t~ld~~R~~~~la~~l~v~~~~v~~~vi 154 (295)
++++++++.|+++||+||++++|||+|++|+++ +|.+| ||++||||+ |.||++|+++++|+++|++|++|+++||
T Consensus 96 ~i~~~i~~~i~~~~p~a~vivvtNPvd~~t~~~---~k~~g-~p~~rviG~~t~LD~~R~~~~la~~lgv~~~~v~~~Vi 171 (314)
T 3nep_X 96 EIVGGVTEQFVEGSPDSTIIVVANPLDVMTYVA---YEASG-FPTNRVMGMAGVLDTGRFRSFIAEELDVSVRDVQALLM 171 (314)
T ss_dssp HHHHHHHHHHHTTCTTCEEEECCSSHHHHHHHH---HHHHT-CCGGGEEECCHHHHHHHHHHHHHHHHTCCGGGEEEEEE
T ss_pred HHHHHHHHHHHHhCCCcEEEecCCchhHHHHHH---HHhcC-CChHHEEeecCchHHHHHHHHHHHHhCcCHHHeEEEEE
Confidence 999999999999999999999999999999987 78898 999999999 5999999999999999999999999999
Q ss_pred eCCCCceeeeccccCcCCCCC----CCHHHHHHHHHHhhchhhhhhhhccCCCcchhhHHHHHHHHHHHHHcCcCCCCce
Q 022546 155 GGHAGVTILPLFSQATPKSNN----LSDEEIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAVFADACLMGLNGVPDI 230 (295)
Q Consensus 155 G~hg~~~~vp~~s~~~v~~~~----~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~s~a~a~~~~i~ai~~~~~~~~~v 230 (295)
||||+ +++|+||++++++.+ +++++++++.++++++|++|++.| |+ +++||+|.++++++++|++|.+ .+
T Consensus 172 G~Hg~-t~vp~~S~~~v~g~p~~~~~~~~~~~~i~~~v~~~g~eIi~~k-g~-sa~~a~a~a~~~~~~ail~~~~---~v 245 (314)
T 3nep_X 172 GGHGD-TMVPLPRYTTVGGIPVPQLIDDARIEEIVERTKGAGGEIVDLM-GT-SAWYAPGAAAAEMTEAILKDNK---RI 245 (314)
T ss_dssp ESSGG-GEEEEEEEEEETTEEGGGTSCHHHHHHHHHHHHTHHHHHHHHH-SS-CCCHHHHHHHHHHHHHHHHTCC---EE
T ss_pred CCCCC-cEEeeeecCeECcEehhhccCHHHHHHHHHHHHHhHHHHHhcc-CC-cHHHHHHHHHHHHHHHHHcCCC---eE
Confidence 99999 899999999987632 466778999999999999999976 45 8999999999999999999853 58
Q ss_pred eEEE-EeeCCC-CCccEEEEeEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 022546 231 VECT-FVQSSV-TELPFFASKVRLGKNGADEVLGLGPLSDYEKQGLESLKPELKASIEKGIQFANR 294 (295)
Q Consensus 231 ~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~~~~~~~~~ 294 (295)
+|++ +++|+| .+++|||+||++|++|+++++++ +|+++|+++|++|++.|++.+++..++++.
T Consensus 246 ~~~s~~~~g~yg~~~~~~s~P~~lg~~Gv~~v~~l-~L~~~E~~~l~~s~~~l~~~~~~~~~~l~~ 310 (314)
T 3nep_X 246 LPCAAYCDGEYGLDDLFIGVPVKLGAGGVEEVIEV-DLDADEKAQLKTSAGHVHSNLDDLQRLRDE 310 (314)
T ss_dssp EEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEEEeccccCCCceEEEEEEEEeCCEEEEecCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 8887 889998 67999999999999999999998 999999999999999999999988777653
No 7
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=100.00 E-value=2.9e-63 Score=453.70 Aligned_cols=272 Identities=21% Similarity=0.305 Sum_probs=245.6
Q ss_pred CCCCCcCeEEEEeCCC--chhHHHhhhCCCCC--CeEEEeeCCCchhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHH
Q 022546 2 KLDPLVSSLSLYDIAN--TPGVAADVSHINSP--AQVEGYAGEEQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGI 77 (295)
Q Consensus 2 ~~~~~~~ei~L~D~~~--~~~~~~Dl~~~~~~--~~v~~~~~t~d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i 77 (295)
++.+++++|+|+|+++ ++|+++||+|+... ..++.++ ++ +++++|||+||+++|.|++||++|++++.+|+++
T Consensus 25 ~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~--~~-~~a~~~aDvVvi~ag~p~kpG~~R~dL~~~N~~I 101 (326)
T 3pqe_A 25 INQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSY--GT-YEDCKDADIVCICAGANQKPGETRLELVEKNLKI 101 (326)
T ss_dssp HHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEE--EC-GGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHH
T ss_pred HhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEe--Cc-HHHhCCCCEEEEecccCCCCCccHHHHHHHHHHH
Confidence 3467789999999987 79999999998421 2444443 34 5899999999999999999999999999999999
Q ss_pred HHHHHHHHHhhCCCeEEEEecCCccchHHHHHHHHHHhCCCCCCCeeec-chhhHHHHHHHHHhhcCCCCccceEEEeeC
Q 022546 78 VKSLCTAIANYCPHALVNMISNPVNSTVPIAAEVFKKAGTYDEKKLFGV-TTLDVVRAKTFYAGKVNVPVAEVNVPVIGG 156 (295)
Q Consensus 78 ~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~k~sg~~~~~kviG~-t~ld~~R~~~~la~~l~v~~~~v~~~viG~ 156 (295)
++++++.|+++||+||++++|||+|++|+++ +|.+| ||++||||+ |.||++|+++++|+++|++|++|+++||||
T Consensus 102 v~~i~~~I~~~~p~a~vlvvtNPvd~~t~~~---~k~~g-~p~~rviG~gt~LD~~R~~~~la~~lgv~~~~V~~~V~Ge 177 (326)
T 3pqe_A 102 FKGIVSEVMASGFDGIFLVATNPVDILTYAT---WKFSG-LPKERVIGSGTTLDSARFRFMLSEYFGAAPQNVCAHIIGE 177 (326)
T ss_dssp HHHHHHHHHHTTCCSEEEECSSSHHHHHHHH---HHHHC-CCGGGEEECTTHHHHHHHHHHHHHHHTCCGGGEECCEEBS
T ss_pred HHHHHHHHHHhcCCeEEEEcCChHHHHHHHH---HHhcC-CCHHHEEeeccccHHHHHHHHHHHHhCCCHHHceeeeeec
Confidence 9999999999999999999999999999987 78898 999999999 999999999999999999999999999999
Q ss_pred CCCceeeeccccCcCCCCCC----------CHHHHHHHHHHhhchhhhhhhhccCCCcchhhHHHHHHHHHHHHHcCcCC
Q 022546 157 HAGVTILPLFSQATPKSNNL----------SDEEIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAVFADACLMGLNG 226 (295)
Q Consensus 157 hg~~~~vp~~s~~~v~~~~~----------~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~s~a~a~~~~i~ai~~~~~~ 226 (295)
||+ ++||+||++++++.++ ++++++++.++++++|++|++. ||+++||+|.++++++++|++|.+
T Consensus 178 HG~-t~vp~~S~~~v~g~p~~~~~~~~~~~~~~~~~~i~~~v~~~g~eIi~~---kG~t~~a~a~a~~~~~~ail~~~~- 252 (326)
T 3pqe_A 178 HGD-TELPVWSHANVGGVPVSELVEKNDAYKQEELDQIVDDVKNAAYHIIEK---KGATYYGVAMSLARITKAILHNEN- 252 (326)
T ss_dssp SST-TCEECGGGCEETTEEHHHHHHTCTTSCHHHHHHHHHHHHHHHHHHHHH---HSCCCHHHHHHHHHHHHHHHTTCC-
T ss_pred CCC-ceeeeeeeeeECCEEHHHHhhcccCCCHHHHHHHHHHHHhhhheeeeC---CCCcHHHHHHHHHHHHHHHhcCCC-
Confidence 999 9999999999876322 5667899999999999999994 589999999999999999999853
Q ss_pred CCceeEEE-EeeCCC-CCccEEEEeEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 022546 227 VPDIVECT-FVQSSV-TELPFFASKVRLGKNGADEVLGLGPLSDYEKQGLESLKPELKASIEKG 288 (295)
Q Consensus 227 ~~~v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~~~ 288 (295)
.++|++ +++|+| .+++|||+||++|++|+++++++ +|+++|+++|++|++.|++.+++.
T Consensus 253 --~v~~~s~~~~g~yg~~~v~~s~P~~lg~~Gv~~iv~l-~L~~~E~~~l~~s~~~l~~~~~~~ 313 (326)
T 3pqe_A 253 --SILTVSTYLDGQYGADDVYIGVPAVVNRGGIAGITEL-NLNEKEKEQFLHSAGVLKNILKPH 313 (326)
T ss_dssp --EEECCEEEEESGGGCEEEEEECCEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHHTTT
T ss_pred --cEEEEEEeeccccCCCceEEEEEEEEcCCceEEEecC-CCCHHHHHHHHHHHHHHHHHHHHh
Confidence 588876 889998 56999999999999999999998 999999999999999999988753
No 8
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=100.00 E-value=3.3e-62 Score=446.36 Aligned_cols=276 Identities=33% Similarity=0.519 Sum_probs=250.0
Q ss_pred CCCCcCeEEEEeCCC--chhHHHhhhCCCC----CCeEEEeeCCCchhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHH
Q 022546 3 LDPLVSSLSLYDIAN--TPGVAADVSHINS----PAQVEGYAGEEQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAG 76 (295)
Q Consensus 3 ~~~~~~ei~L~D~~~--~~~~~~Dl~~~~~----~~~v~~~~~t~d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~ 76 (295)
+.++. +|+|+|+++ ++|+++||+|+.. +.+++. ++| +++++|||+||+++|.|++|||+|.+++.+|++
T Consensus 26 ~~~~~-~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~---t~d-~~a~~~aDvVIi~ag~p~k~G~~R~dl~~~N~~ 100 (321)
T 3p7m_A 26 IKQLG-DVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRG---TND-YKDLENSDVVIVTAGVPRKPGMSRDDLLGINIK 100 (321)
T ss_dssp HTTCC-EEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEE---ESC-GGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHH
T ss_pred hCCCc-eEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEE---cCC-HHHHCCCCEEEEcCCcCCCCCCCHHHHHHHhHH
Confidence 45665 999999987 6899999999852 345553 245 589999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhCCCeEEEEecCCccchHHHHHHHHHHhCCCCCCCeeecc-hhhHHHHHHHHHhhcCCCCccceEEEee
Q 022546 77 IVKSLCTAIANYCPHALVNMISNPVNSTVPIAAEVFKKAGTYDEKKLFGVT-TLDVVRAKTFYAGKVNVPVAEVNVPVIG 155 (295)
Q Consensus 77 i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~k~sg~~~~~kviG~t-~ld~~R~~~~la~~l~v~~~~v~~~viG 155 (295)
+++++++.|+++||+|+++++|||+|++|+++ +|.+| ||++||||+| .||++|+++++|+++|++|++|+++|||
T Consensus 101 i~~~i~~~i~~~~p~a~vivvtNPvd~~t~~~---~k~sg-~p~~rviG~~~~LD~~R~~~~la~~l~v~~~~v~~~v~G 176 (321)
T 3p7m_A 101 VMQTVGEGIKHNCPNAFVICITNPLDIMVNML---QKFSG-VPDNKIVGMAGVLDSARFRTFLADELNVSVQQVQAYVMG 176 (321)
T ss_dssp HHHHHHHHHHHHCTTCEEEECCSSHHHHHHHH---HHHHC-CCGGGEEEECHHHHHHHHHHHHHHHHTCCGGGEECCEEE
T ss_pred HHHHHHHHHHHHCCCcEEEEecCchHHHHHHH---HHhcC-CCHHHEEeeccchHHHHHHHHHHHHhCcCHHHceEeeec
Confidence 99999999999999999999999999999987 88998 9999999995 9999999999999999999999999999
Q ss_pred CCCCceeeeccccCcCCCCC---------CCHHHHHHHHHHhhchhhhhhhhccCCCcchhhHHHHHHHHHHHHHcCcCC
Q 022546 156 GHAGVTILPLFSQATPKSNN---------LSDEEIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAVFADACLMGLNG 226 (295)
Q Consensus 156 ~hg~~~~vp~~s~~~v~~~~---------~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~s~a~a~~~~i~ai~~~~~~ 226 (295)
|||+ +++|+||++++++.+ +++++++++.++++++|++|++.+ |+|+++||+|.++++++++|++|++
T Consensus 177 ~HG~-t~~p~~s~~~v~g~p~~~~~~~~~~~~~~~~~i~~~v~~~g~eIi~~~-g~gsa~~~~a~a~~~~~~ail~~~~- 253 (321)
T 3p7m_A 177 GHGD-TMVPLTKMSNVAGVSLEQLVKEGKLKQERLDAIVSRTRSGGGEIVALL-KTGSAYYAPAAAGIQMAESFLKDKK- 253 (321)
T ss_dssp CSGG-GEEECTTTCEETTEEHHHHHHTTSSCHHHHHHHHHHHHTHHHHHHHHH-SSSCCCHHHHHHHHHHHHHHHTTCC-
T ss_pred CcCC-ceeeeeeeceECCEehhhhccccCCCHHHHHHHHHHHHhhhHHHHHhc-CCCChHHHHHHHHHHHHHHHHcCCC-
Confidence 9998 999999999987632 366788999999999999999987 8899999999999999999999864
Q ss_pred CCceeEEE-Eee-CCC--CCccEEEEeEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 022546 227 VPDIVECT-FVQ-SSV--TELPFFASKVRLGKNGADEVLGLGPLSDYEKQGLESLKPELKASIEKGIQFANR 294 (295)
Q Consensus 227 ~~~v~~~~-~~~-g~~--~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~~~~~~~~~ 294 (295)
.++|++ +++ |+| ++++|||+||++|++|++++ ++ +|+++|+++|++|++.|++.++...+++++
T Consensus 254 --~v~~~s~~~~~g~ygi~~~v~~s~P~~~g~~Gv~~v-~l-~L~~~E~~~l~~s~~~l~~~~~~~~~~l~~ 321 (321)
T 3p7m_A 254 --MILPCAAKVKAGMYGLDEDLFVGVPTEISANGVRPI-EV-EISDKEREQLQVSINAIKDLNKAAAEILAK 321 (321)
T ss_dssp --EEEEEEEEECTTGGGCSSCEEEEEEEEEETTEEEEC-CC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred --cEEEEEEEccCcccCCCCCeEEEEEEEEcCCEEEEe-CC-CCCHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 588987 788 888 55999999999999999999 88 999999999999999999999988877753
No 9
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=100.00 E-value=1.4e-62 Score=443.40 Aligned_cols=262 Identities=28% Similarity=0.405 Sum_probs=239.8
Q ss_pred CCCCcCeEEEEeCCC--chhHHHhhhCCC--C--CCeEEEeeCCCchhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHH
Q 022546 3 LDPLVSSLSLYDIAN--TPGVAADVSHIN--S--PAQVEGYAGEEQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAG 76 (295)
Q Consensus 3 ~~~~~~ei~L~D~~~--~~~~~~Dl~~~~--~--~~~v~~~~~t~d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~ 76 (295)
+++.+++|+|+|+++ ++|+++|++|+. + +.+++. ++| +++++|||+||+++|.|++|||+|++++.+|++
T Consensus 21 ~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~---t~d-~~a~~~aDiVViaag~~~kpG~~R~dl~~~N~~ 96 (294)
T 1oju_A 21 LNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVG---GAD-YSLLKGSEIIVVTAGLARKPGMTRLDLAHKNAG 96 (294)
T ss_dssp HHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEE---ESC-GGGGTTCSEEEECCCCCCCSSCCHHHHHHHHHH
T ss_pred hCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEE---eCC-HHHhCCCCEEEECCCCCCCCCCcHHHHHHHHHH
Confidence 457788999999987 788999999875 2 234543 346 799999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhCCCeEEEEecCCccchHHHHHHHHHHhCCCCCCCeeec-chhhHHHHHHHHHhhcCCCCccceEEEee
Q 022546 77 IVKSLCTAIANYCPHALVNMISNPVNSTVPIAAEVFKKAGTYDEKKLFGV-TTLDVVRAKTFYAGKVNVPVAEVNVPVIG 155 (295)
Q Consensus 77 i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~k~sg~~~~~kviG~-t~ld~~R~~~~la~~l~v~~~~v~~~viG 155 (295)
+++++++.|+++||+|+++++|||+|++|+++ +|.+| ||++||||+ |.||++||++++| ++|++|++ +++|||
T Consensus 97 i~~~i~~~i~~~~p~a~iivvsNPvd~~t~~~---~k~~g-~p~~rviG~gt~LD~~R~~~~la-~l~v~~~~-~~~V~G 170 (294)
T 1oju_A 97 IIKDIAKKIVENAPESKILVVTNPMDVMTYIM---WKESG-KPRNEVFGMGNQLDSQRLKERLY-NAGARNIR-RAWIIG 170 (294)
T ss_dssp HHHHHHHHHHTTSTTCEEEECSSSHHHHHHHH---HHHSC-CCTTSEEECSHHHHHHHHHHHHH-HTTCBSCC-CCCEEB
T ss_pred HHHHHHHHHHhhCCCeEEEEeCCcchHHHHHH---HHhcC-CCHHHEeecccccHHHHHHHHHH-HhCCCccC-ceEEEe
Confidence 99999999999999999999999999999987 88998 999999999 8999999999999 99999999 999999
Q ss_pred CCCCceeeeccccCcCCCCCCCHHHHHHHHHHhhchhhhhhhhccCCCcchhhHHHHHHHHHHHHHcCcCCCCceeEEE-
Q 022546 156 GHAGVTILPLFSQATPKSNNLSDEEIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAVFADACLMGLNGVPDIVECT- 234 (295)
Q Consensus 156 ~hg~~~~vp~~s~~~v~~~~~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~s~a~a~~~~i~ai~~~~~~~~~v~~~~- 234 (295)
|||+ +++|+||++++++.+ +++++.++++++|++|++. ||+++||+|.++++++++|++|.+ .++|++
T Consensus 171 ~Hg~-t~vp~~s~~~v~g~~----~~~~~~~~v~~~g~eii~~---kG~t~~~~a~a~~~~~~ail~~~~---~v~~~s~ 239 (294)
T 1oju_A 171 EHGD-SMFVAKSLADFDGEV----DWEAVENDVRFVAAEVIKR---KGATIFGPAVAIYRMVKAVVEDTG---EIIPTSM 239 (294)
T ss_dssp CSST-TCEECGGGCCCBSCC----CHHHHHHHHHTTHHHHHHH---HSSCCHHHHHHHHHHHHHHHTTCC---CEEEEEE
T ss_pred cCCC-ceeeecccceECCcC----hHHHHHHHHHHHHHHHHHh---cCCcchHHHHHHHHHHHHHHcCCC---eEEEEEe
Confidence 9999 999999999997643 6789999999999999995 479999999999999999999853 588987
Q ss_pred EeeCCC-CCccEEEEeEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 022546 235 FVQSSV-TELPFFASKVRLGKNGADEVLGLGPLSDYEKQGLESLKPELKASIEK 287 (295)
Q Consensus 235 ~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~~ 287 (295)
+++|+| .+++|||+||++|++|++ ++++ +|+++|+++|++|++.|++.++.
T Consensus 240 ~~~g~yg~~~~~~s~P~~~g~~Gv~-v~~l-~L~~~E~~~l~~s~~~l~~~~~~ 291 (294)
T 1oju_A 240 ILQGEYGIENVAVGVPAKLGKNGAE-VADI-KLSDEEIEKLRNSAKILRERLEE 291 (294)
T ss_dssp EEESGGGCEEEEEEEEEEEETTEEE-ECCC-CCCHHHHHHHHHHHHHHHHHHHT
T ss_pred cccccCCCCceEEEEEEEEeCCEEE-EecC-CCCHHHHHHHHHHHHHHHHHHHh
Confidence 889998 569999999999999999 9998 99999999999999999998875
No 10
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=100.00 E-value=3.8e-62 Score=444.62 Aligned_cols=270 Identities=30% Similarity=0.486 Sum_probs=246.5
Q ss_pred CCCCcCeEEEEeCC--C--chhHHHhhhCCC----CCCeEEEeeCCCchhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHH
Q 022546 3 LDPLVSSLSLYDIA--N--TPGVAADVSHIN----SPAQVEGYAGEEQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNIN 74 (295)
Q Consensus 3 ~~~~~~ei~L~D~~--~--~~~~~~Dl~~~~----~~~~v~~~~~t~d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n 74 (295)
+.++ ++++|+|++ + ++|+++||+|+. ...+++.+ +| +++++|||+||+++|.|++|||+|++++.+|
T Consensus 29 ~~g~-~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t---~d-~~a~~~aDvVIiaag~p~kpg~~R~dl~~~N 103 (315)
T 3tl2_A 29 QKEL-ADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGT---SD-YADTADSDVVVITAGIARKPGMSRDDLVATN 103 (315)
T ss_dssp HTTC-CEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEE---SC-GGGGTTCSEEEECCSCCCCTTCCHHHHHHHH
T ss_pred hCCC-CeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEc---CC-HHHhCCCCEEEEeCCCCCCCCCCHHHHHHHH
Confidence 4567 899999998 4 789999999874 23455542 35 5899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEEecCCccchHHHHHHHHHHhCCCCCCCeeec-chhhHHHHHHHHHhhcCCCCccceEEE
Q 022546 75 AGIVKSLCTAIANYCPHALVNMISNPVNSTVPIAAEVFKKAGTYDEKKLFGV-TTLDVVRAKTFYAGKVNVPVAEVNVPV 153 (295)
Q Consensus 75 ~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~k~sg~~~~~kviG~-t~ld~~R~~~~la~~l~v~~~~v~~~v 153 (295)
+++++++++.|+++||++|++++|||+|++|+++ +|.+| ||++||||+ |.||++|+++++|+++|++|++|+++|
T Consensus 104 ~~i~~~i~~~i~~~~p~a~vlvvsNPvd~~t~~~---~k~sg-~p~~rviG~gt~LD~~R~~~~la~~lgv~~~~v~~~v 179 (315)
T 3tl2_A 104 SKIMKSITRDIAKHSPNAIIVVLTNPVDAMTYSV---FKEAG-FPKERVIGQSGVLDTARFRTFIAQELNLSVKDITGFV 179 (315)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEECCSSHHHHHHHH---HHHHC-CCGGGEEECCHHHHHHHHHHHHHHHHTCCGGGEECCE
T ss_pred HHHHHHHHHHHHHhCCCeEEEECCChHHHHHHHH---HHhcC-CChHHEEeeccCcHHHHHHHHHHHHhCcCHHHceeeE
Confidence 9999999999999999999999999999999987 78999 999999999 999999999999999999999999999
Q ss_pred eeCCCCceeeeccccCcCCCCC----CCHHHHHHHHHHhhchhhhhhhhccCCCcchhhHHHHHHHHHHHHHcCcCCCCc
Q 022546 154 IGGHAGVTILPLFSQATPKSNN----LSDEEIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAVFADACLMGLNGVPD 229 (295)
Q Consensus 154 iG~hg~~~~vp~~s~~~v~~~~----~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~s~a~a~~~~i~ai~~~~~~~~~ 229 (295)
|||||+ ++||+||++++++.+ +++++++++.++++++|++|++.+ |||+++||+|.++++++++|++|.+ .
T Consensus 180 iG~Hg~-t~vp~~S~~~v~g~p~~~~~~~~~~~~i~~~v~~~g~eii~~~-~kgst~~a~a~a~~~~~~ail~~~~---~ 254 (315)
T 3tl2_A 180 LGGHGD-DMVPLVRYSYAGGIPLETLIPKERLEAIVERTRKGGGEIVGLL-GNGSAYYAPAASLVEMTEAILKDQR---R 254 (315)
T ss_dssp EBCSGG-GCEECGGGCEETTEEGGGTSCHHHHHHHHHHHHTHHHHHHHHH-SSSCCCHHHHHHHHHHHHHHHTTCC---E
T ss_pred ecCCCC-cceeecccCeECCEEHHHhCCHHHHHHHHHHHHHHHHHHHHhc-CCCcchHHHHHHHHHHHHHHHcCCC---c
Confidence 999999 999999999997632 567788999999999999999974 7899999999999999999999853 5
Q ss_pred eeEEE-EeeCCC-CCccEEEEeEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 022546 230 IVECT-FVQSSV-TELPFFASKVRLGKNGADEVLGLGPLSDYEKQGLESLKPELKASIEK 287 (295)
Q Consensus 230 v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~~ 287 (295)
++|++ +++|+| .+++|||+||++|++|+++++++ +|+++|+++|++|++.|++.++.
T Consensus 255 v~~~s~~~~g~yg~~~~~~s~P~~~g~~Gv~~v~~l-~L~~~E~~~l~~s~~~l~~~~~~ 313 (315)
T 3tl2_A 255 VLPAIAYLEGEYGYSDLYLGVPVILGGNGIEKIIEL-ELLADEKEALDRSVESVRNVMKV 313 (315)
T ss_dssp EEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEEEEeccCccCCCceEEEEEEEEeCCEEEEEcCC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence 88887 889999 67999999999999999999998 99999999999999999987753
No 11
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=100.00 E-value=3.2e-62 Score=446.42 Aligned_cols=276 Identities=30% Similarity=0.488 Sum_probs=244.6
Q ss_pred CCCCcCeEEEEeCCC--chhHHHhhhCCCC----CCeEEEeeCCCchhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHH
Q 022546 3 LDPLVSSLSLYDIAN--TPGVAADVSHINS----PAQVEGYAGEEQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAG 76 (295)
Q Consensus 3 ~~~~~~ei~L~D~~~--~~~~~~Dl~~~~~----~~~v~~~~~t~d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~ 76 (295)
++++. +|+|+|+++ ++|+++||+|+.. +.++.. ++|+ ++++|||+||+++|.|++||++|.+++.+|++
T Consensus 28 ~~~~~-~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~---t~d~-~a~~~aDiVIiaag~p~k~G~~R~dl~~~N~~ 102 (324)
T 3gvi_A 28 LKELG-DVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTG---ANDY-AAIEGADVVIVTAGVPRKPGMSRDDLLGINLK 102 (324)
T ss_dssp HTTCC-EEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEE---ESSG-GGGTTCSEEEECCSCCCC-----CHHHHHHHH
T ss_pred hCCCC-eEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEE---eCCH-HHHCCCCEEEEccCcCCCCCCCHHHHHHhhHH
Confidence 45554 999999987 7899999999742 345554 2464 89999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhCCCeEEEEecCCccchHHHHHHHHHHhCCCCCCCeeecc-hhhHHHHHHHHHhhcCCCCccceEEEee
Q 022546 77 IVKSLCTAIANYCPHALVNMISNPVNSTVPIAAEVFKKAGTYDEKKLFGVT-TLDVVRAKTFYAGKVNVPVAEVNVPVIG 155 (295)
Q Consensus 77 i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~k~sg~~~~~kviG~t-~ld~~R~~~~la~~l~v~~~~v~~~viG 155 (295)
+++++++.|+++||+|+++++|||+|++|+++ +|.+| ||++||||+| .||++|+++++|+++|++|++|+++|||
T Consensus 103 i~~~i~~~i~~~~p~a~iivvtNPvd~~t~~~---~k~sg-~p~~rviG~~~~LD~~R~~~~la~~lgv~~~~v~~~v~G 178 (324)
T 3gvi_A 103 VMEQVGAGIKKYAPEAFVICITNPLDAMVWAL---QKFSG-LPAHKVVGMAGVLDSARFRYFLSEEFNVSVEDVTVFVLG 178 (324)
T ss_dssp HHHHHHHHHHHHCTTCEEEECCSSHHHHHHHH---HHHHC-CCGGGEEECCHHHHHHHHHHHHHHHHTCCGGGEECCEEE
T ss_pred HHHHHHHHHHHHCCCeEEEecCCCcHHHHHHH---HHhcC-CCHHHEEeecCccHHHHHHHHHHHHhCcCHHHCeEEEEc
Confidence 99999999999999999999999999999987 78898 9999999995 8999999999999999999999999999
Q ss_pred CCCCceeeeccccCcCCCCC---------CCHHHHHHHHHHhhchhhhhhhhccCCCcchhhHHHHHHHHHHHHHcCcCC
Q 022546 156 GHAGVTILPLFSQATPKSNN---------LSDEEIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAVFADACLMGLNG 226 (295)
Q Consensus 156 ~hg~~~~vp~~s~~~v~~~~---------~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~s~a~a~~~~i~ai~~~~~~ 226 (295)
|||+ +++|+||++++++.+ +++++++++.++++++|++|++.| |||+++||+|.++++++++|++|++
T Consensus 179 ~HG~-t~~p~~s~~~v~g~p~~~~~~~~~~~~~~~~~i~~~v~~~g~eIi~~~-gkgsa~~~~a~a~~~~~~ail~~~~- 255 (324)
T 3gvi_A 179 GHGD-SMVPLARYSTVAGIPLPDLVKMGWTSQDKLDKIIQRTRDGGAEIVGLL-KTGSAFYAPAASAIQMAESYLKDKK- 255 (324)
T ss_dssp CSGG-GEEECGGGCEETTEEHHHHHHTTSSCHHHHHHHHHHHHTHHHHHHHHH-SSCCCCHHHHHHHHHHHHHHHTTCC-
T ss_pred CCCC-ceeeehhhCeECCEEHHHhhhccCCCHHHHHHHHHHHHHhHHHHHHhc-CCCcHHHHHHHHHHHHHHHHHcCCC-
Confidence 9998 999999999987632 356788999999999999999987 8899999999999999999999864
Q ss_pred CCceeEEE-EeeCCC-CCccEEEEeEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 022546 227 VPDIVECT-FVQSSV-TELPFFASKVRLGKNGADEVLGLGPLSDYEKQGLESLKPELKASIEKGIQFANR 294 (295)
Q Consensus 227 ~~~v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~~~~~~~~~ 294 (295)
.++|++ +++|+| .+++|||+||++|++|+++++++ +|+++|+++|++|++.|++.++.... +++
T Consensus 256 --~v~~~s~~~~g~yg~~~v~~s~P~~~g~~Gv~~v~~l-~L~~~E~~~l~~s~~~l~~~~~~~~~-~~~ 321 (324)
T 3gvi_A 256 --RVLPVAAQLSGQYGVKDMYVGVPTVIGANGVERIIEI-DLDKDEKAQFDKSVASVAGLCEACIG-IAP 321 (324)
T ss_dssp --EEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHHHHHHH-HCG
T ss_pred --cEEEEEEEecCccCCCceEEEEEEEEeCCEEEEecCC-CCCHHHHHHHHHHHHHHHHHHHHHhh-hcc
Confidence 588987 789998 56899999999999999999998 99999999999999999999987654 443
No 12
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=100.00 E-value=2.5e-61 Score=443.14 Aligned_cols=274 Identities=24% Similarity=0.347 Sum_probs=236.5
Q ss_pred CCCCcCeEEEEeCCC--chhHHHhhhCCCCC-CeEEEeeCCCchhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHH
Q 022546 3 LDPLVSSLSLYDIAN--TPGVAADVSHINSP-AQVEGYAGEEQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVK 79 (295)
Q Consensus 3 ~~~~~~ei~L~D~~~--~~~~~~Dl~~~~~~-~~v~~~~~t~d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~ 79 (295)
++++++||+|+|+++ ++|+++||+|+.++ .+++. ++|++++++|||+||+++|.|+++|++|++++.+|+++++
T Consensus 30 ~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~---t~d~~~al~dADvVvitaG~p~kpG~~R~dLl~~N~~I~~ 106 (343)
T 3fi9_A 30 MMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTF---TSDIKEALTDAKYIVSSGGAPRKEGMTREDLLKGNAEIAA 106 (343)
T ss_dssp HTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEE---ESCHHHHHTTEEEEEECCC-------CHHHHHHHHHHHHH
T ss_pred hcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEE---cCCHHHHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHH
Confidence 467889999999987 79999999998642 24443 3467899999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCCeE-EEEecCCccchHHHHHHHHHHhCCCCCCCeeecchhhHHHHHHHHHhhcCCCCccce-EEEeeCC
Q 022546 80 SLCTAIANYCPHAL-VNMISNPVNSTVPIAAEVFKKAGTYDEKKLFGVTTLDVVRAKTFYAGKVNVPVAEVN-VPVIGGH 157 (295)
Q Consensus 80 ~i~~~i~~~~p~a~-viv~tNP~d~~t~~~~~~~k~sg~~~~~kviG~t~ld~~R~~~~la~~l~v~~~~v~-~~viG~h 157 (295)
++++.|+++||+++ ++++|||+|++|+++ +|++| ||++||+|+|.||++||++++|+++|++|++|+ ++|||||
T Consensus 107 ~i~~~i~~~~p~a~~vlvvsNPvd~~t~i~---~k~sg-~p~~rv~g~t~LDs~R~~~~la~~l~v~~~~v~~~~ViGeH 182 (343)
T 3fi9_A 107 QLGKDIKSYCPDCKHVIIIFNPADITGLVT---LIYSG-LKPSQVTTLAGLDSTRLQSELAKHFGIKQSLVTNTRTYGGH 182 (343)
T ss_dssp HHHHHHHHHCTTCCEEEECSSSHHHHHHHH---HHHHT-CCGGGEEEECCHHHHHHHHHHHHHHTSCGGGEECCCEEESS
T ss_pred HHHHHHHHhccCcEEEEEecCchHHHHHHH---HHHcC-CCcceEEEecCcHHHHHHHHHHHHhCcCHHHcccceEEEcC
Confidence 99999999999996 999999999999997 89999 999999999999999999999999999999997 8999999
Q ss_pred CCceeeeccccCcCCCCC---------CCHHHHHHHHHHhhchhhhhhhhccCCCcchhhHHHHHHHHHHHHHcCcCCCC
Q 022546 158 AGVTILPLFSQATPKSNN---------LSDEEIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAVFADACLMGLNGVP 228 (295)
Q Consensus 158 g~~~~vp~~s~~~v~~~~---------~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~s~a~a~~~~i~ai~~~~~~~~ 228 (295)
|+ +++|+||++++++.+ +++++|+++.++++++|++|++.| | ++++||+|.++++++++|++|++
T Consensus 183 gd-s~vp~~S~a~v~G~pl~~~~~~~~~~~~~~~~i~~~v~~~g~eIi~~k-g-~ss~~s~A~a~~~~~~ail~d~~--- 256 (343)
T 3fi9_A 183 GE-QMAVFASTAKVNGTPLTDLIGTDKLTNEQWAELKQRVVKGGANIIKLR-G-RSSFQSPSYVSIEMIRAAMGGEA--- 256 (343)
T ss_dssp GG-GEEECGGGCEETTEEGGGTTTBTTBCHHHHHHHHHHHHTHHHHHHHHH-S-SCCCHHHHHHHHHHHHHHTTSSC---
T ss_pred CC-ceeeeeecceECCEEhhHhccccCCCHHHHHHHHHHHHhhhHHHHHcc-C-CCcHHhHHHHHHHHHHHHHhCCC---
Confidence 99 899999999987632 367789999999999999999965 2 24567999999999999999975
Q ss_pred ceeEEE-EeeCCCCCccEEEEeEEEcCCceEEEccCCC-CCHHHHHHHHHHHHHHHHHHHHHhh
Q 022546 229 DIVECT-FVQSSVTELPFFASKVRLGKNGADEVLGLGP-LSDYEKQGLESLKPELKASIEKGIQ 290 (295)
Q Consensus 229 ~v~~~~-~~~g~~~~~~~~s~Pv~ig~~Gv~~v~~~~~-L~~~E~~~l~~s~~~l~~~~~~~~~ 290 (295)
.++|++ +++|++.+++|||+||++|++|++.+ ++.+ |+++|+++|++|++.|++.++...+
T Consensus 257 ~v~~~s~~~~g~~~~~v~~s~P~~lg~~Gv~~~-~~~~ll~~~E~~~l~~Sa~~l~~~~~~~~~ 319 (343)
T 3fi9_A 257 FRWPAGCYVNVPGFEHIMMAMETTITKDGVKHS-DINQLGNEAERAALKESYSHLAKLRDEVIA 319 (343)
T ss_dssp CCSCEEEEEEETTEEEEEEEESEEEETTEEEEC-CGGGSSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEEEeCCCcCceEEEeEEEEeCCceEEE-ecCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 367765 88887778999999999999999876 4412 8999999999999999999887755
No 13
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=100.00 E-value=1.7e-60 Score=436.31 Aligned_cols=277 Identities=25% Similarity=0.397 Sum_probs=241.2
Q ss_pred CCCCcCeEEEEeCCC--chhHHHhhhCCCC-CCeEEEeeCCCchhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHH
Q 022546 3 LDPLVSSLSLYDIAN--TPGVAADVSHINS-PAQVEGYAGEEQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVK 79 (295)
Q Consensus 3 ~~~~~~ei~L~D~~~--~~~~~~Dl~~~~~-~~~v~~~~~t~d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~ 79 (295)
++++++||+|+|+++ +++.++||+|+.. ...++... ++ +++++|||+||+++|.++++||+|++++.+|+++++
T Consensus 30 ~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~--~~-~~a~~~aDvVii~ag~~~k~g~~R~dl~~~n~~i~~ 106 (326)
T 2zqz_A 30 LQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYS--AE-YSDAKDADLVVITAGAPQKPGETRLDLVNKNLKILK 106 (326)
T ss_dssp HHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE--CC-GGGGGGCSEEEECCCCC-----CHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEE--CC-HHHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHH
Confidence 457789999999987 7899999999851 12333333 23 689999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCCeEEEEecCCccchHHHHHHHHHHhCCCCCCCeeec-chhhHHHHHHHHHhhcCCCCccceEEEeeCCC
Q 022546 80 SLCTAIANYCPHALVNMISNPVNSTVPIAAEVFKKAGTYDEKKLFGV-TTLDVVRAKTFYAGKVNVPVAEVNVPVIGGHA 158 (295)
Q Consensus 80 ~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~k~sg~~~~~kviG~-t~ld~~R~~~~la~~l~v~~~~v~~~viG~hg 158 (295)
++++.|+++||+||++++|||+|++|+++ +|.+| +|++||||+ |.||++|+++++|+++|++|++|+++||||||
T Consensus 107 ~i~~~i~~~~p~a~iiv~tNPv~~~t~~~---~k~s~-~p~~rviG~gt~LD~~R~~~~la~~lgv~~~~v~~~v~G~HG 182 (326)
T 2zqz_A 107 SIVDPIVDSGFNGIFLVAANPVDILTYAT---WKLSG-FPKNRVVGSGTSLDTARFRQSIAEMVNVDARSVHAYIMGEHG 182 (326)
T ss_dssp HHHHHHHHHTCCSEEEECSSSHHHHHHHH---HHHHC-CCGGGEEECTTHHHHHHHHHHHHHHHTCCGGGEECCEEBSSS
T ss_pred HHHHHHHHHCCCeEEEEeCCcHHHHHHHH---HHHcC-CCHHHEEEccccchHHHHHHHHHHHhCCChhheEEEEecccC
Confidence 99999999999999999999999999987 89998 999999999 99999999999999999999999999999999
Q ss_pred CceeeeccccCcCCCCC----------CCHHHHHHHHHHhhchhhhhhhhccCCCcchhhHHHHHHHHHHHHHcCcCCCC
Q 022546 159 GVTILPLFSQATPKSNN----------LSDEEIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAVFADACLMGLNGVP 228 (295)
Q Consensus 159 ~~~~vp~~s~~~v~~~~----------~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~s~a~a~~~~i~ai~~~~~~~~ 228 (295)
+ +++|+||++++++.+ ++++.++++.++++++++++++ +||+++|++|.++++++++|++|.+
T Consensus 183 ~-t~~p~~s~~~v~g~~~~e~~~~~~~~~~~~~~~i~~~v~~~g~eii~---~kG~t~~~~a~aa~~~~~ai~~~~~--- 255 (326)
T 2zqz_A 183 D-TEFPVWSHANIGGVTIAEWVKAHPEIKEDKLVKMFEDVRDAAYEIIK---LKGATFYGIATALARISKAILNDEN--- 255 (326)
T ss_dssp T-TCEECGGGCEETTEEHHHHHHHCTTSCHHHHHHHHHHHHTHHHHHHH---HHSCCCHHHHHHHHHHHHHHHTTCC---
T ss_pred C-ceEeehhhceECCEEHHHhhcccccCCHHHHHHHHHHHHHhHHHHHH---cCCCcHHHHHHHHHHHHHHHHhCCC---
Confidence 9 999999999886531 4556778999999999999999 4588999999999999999999964
Q ss_pred ceeEEE-EeeCCC-CCccEEEEeEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 022546 229 DIVECT-FVQSSV-TELPFFASKVRLGKNGADEVLGLGPLSDYEKQGLESLKPELKASIEKGIQFANR 294 (295)
Q Consensus 229 ~v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~~~~~~~~~ 294 (295)
.+++++ +++|+| .+++|||+||++|++|+++++++ +|+++|+++|++|++.|++.++...++++.
T Consensus 256 ~~~~vsv~~~G~yg~~~~~~svP~~ig~~Gv~~i~~~-~L~~~e~~~l~~s~~~l~~~~~~~~~~~~~ 322 (326)
T 2zqz_A 256 AVLPLSVYMDGQYGLNDIYIGTPAVINRNGIQNILEI-PLTDHEEESMQKSASQLKKVLTDAFAKNDI 322 (326)
T ss_dssp EEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHHHHHC-----
T ss_pred cEEEEEEeccCccCCCceEEEEEEEEcCCeeEEEecC-CCCHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 477876 889998 34999999999999999999997 999999999999999999999999888875
No 14
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=100.00 E-value=1.3e-60 Score=435.93 Aligned_cols=277 Identities=21% Similarity=0.358 Sum_probs=240.1
Q ss_pred CCCCcCeEEEEeCCC--chhHHHhhhCCCC-CCeEEEeeCCCchhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHH
Q 022546 3 LDPLVSSLSLYDIAN--TPGVAADVSHINS-PAQVEGYAGEEQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVK 79 (295)
Q Consensus 3 ~~~~~~ei~L~D~~~--~~~~~~Dl~~~~~-~~~v~~~~~t~d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~ 79 (295)
++++++||+|+|+++ +++.++||+|+.. ...++... ++ +++++|||+||+++|.++++|++|++++.+|+++++
T Consensus 26 ~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~--~~-~~a~~~aDvVii~ag~~~~~g~~R~dl~~~n~~i~~ 102 (318)
T 1ez4_A 26 QQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYS--GE-YSDCKDADLVVITAGAPQKPGESRLDLVNKNLNILS 102 (318)
T ss_dssp HHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEE--CC-GGGGTTCSEEEECCCC----------CHHHHHHHHH
T ss_pred cCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEE--CC-HHHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHH
Confidence 457789999999987 7899999999851 12333333 23 689999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCCeEEEEecCCccchHHHHHHHHHHhCCCCCCCeeec-chhhHHHHHHHHHhhcCCCCccceEEEeeCCC
Q 022546 80 SLCTAIANYCPHALVNMISNPVNSTVPIAAEVFKKAGTYDEKKLFGV-TTLDVVRAKTFYAGKVNVPVAEVNVPVIGGHA 158 (295)
Q Consensus 80 ~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~k~sg~~~~~kviG~-t~ld~~R~~~~la~~l~v~~~~v~~~viG~hg 158 (295)
++++.|+++||+||++++|||+|++|+++ +|.+| ||++||||+ |.||++|+++++|+++|++|++|+++||||||
T Consensus 103 ~i~~~i~~~~p~a~iiv~tNPv~~~t~~~---~k~s~-~p~~rviG~gt~LD~~R~~~~la~~lgv~~~~v~~~v~G~HG 178 (318)
T 1ez4_A 103 SIVKPVVDSGFDGIFLVAANPVDILTYAT---WKFSG-FPKERVIGSGTSLDSSRLRVALGKQFNVDPRSVDAYIMGEHG 178 (318)
T ss_dssp HHHHHHHHTTCCSEEEECSSSHHHHHHHH---HHHHC-CCGGGEEECTTHHHHHHHHHHHHHHHTCCGGGEECCEESSSS
T ss_pred HHHHHHHHhCCCeEEEEeCCcHHHHHHHH---HHHcC-CCHHHEEeccccchHHHHHHHHHHHhCcChhHEEEEEecccC
Confidence 99999999999999999999999999987 89998 999999999 99999999999999999999999999999999
Q ss_pred CceeeeccccCcCCCCC---------CCHHHHHHHHHHhhchhhhhhhhccCCCcchhhHHHHHHHHHHHHHcCcCCCCc
Q 022546 159 GVTILPLFSQATPKSNN---------LSDEEIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAVFADACLMGLNGVPD 229 (295)
Q Consensus 159 ~~~~vp~~s~~~v~~~~---------~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~s~a~a~~~~i~ai~~~~~~~~~ 229 (295)
+ +++|+||++++++.+ ++++.++++.++++++++++++ +||+++|++|.++++++++|++|.+ .
T Consensus 179 ~-t~~p~~s~~~v~g~~~~~~~~~~~~~~~~~~~~~~~v~~~g~eii~---~kg~t~~~~a~a~~~~~~ai~~~~~---~ 251 (318)
T 1ez4_A 179 D-SEFAAYSTATIGTRPVRDVAKEQGVSDDDLAKLEDGVRNKAYDIIN---LKGATFYGIGTALMRISKAILRDEN---A 251 (318)
T ss_dssp S-SCEECGGGCEETTEEHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHH---HHSCCCHHHHHHHHHHHHHHHTTCC---E
T ss_pred C-ceEEEehhhcCCCeeHHHHhhccCCCHHHHHHHHHHHHHhhhhhee---CCCcchHHHHHHHHHHHHHHHhCCC---c
Confidence 9 999999999886531 4566789999999999999999 4588999999999999999999964 5
Q ss_pred eeEEE-EeeCCC-CCccEEEEeEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 022546 230 IVECT-FVQSSV-TELPFFASKVRLGKNGADEVLGLGPLSDYEKQGLESLKPELKASIEKGIQFANR 294 (295)
Q Consensus 230 v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~~~~~~~~~ 294 (295)
+++++ +++|+| .++++||+||++|++|+++++++ +|+++|+++|++|++.|++.+++..++++.
T Consensus 252 ~~~vs~~~~G~yg~~~~~~~vP~~ig~~Gv~~i~~~-~L~~~e~~~l~~s~~~l~~~~~~~~~~~~~ 317 (318)
T 1ez4_A 252 VLPVGAYMDGQYGLNDIYIGTPAIIGGTGLKQIIES-PLSADELKKMQDSAATLKKVLNDGLAELEN 317 (318)
T ss_dssp EEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred EEEEEEeecCccCCCceEEEEEEEEeCCeeEEEcCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 77887 789998 34999999999999999999997 999999999999999999999999888763
No 15
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=100.00 E-value=9.9e-60 Score=434.83 Aligned_cols=279 Identities=22% Similarity=0.233 Sum_probs=235.3
Q ss_pred CCCCCcCe---EEEEeCCC------chhHHHhhhCCCCC--CeEEEeeCCCchhhhcCCCcEEEEcCCCCCCCCCCHHHH
Q 022546 2 KLDPLVSS---LSLYDIAN------TPGVAADVSHINSP--AQVEGYAGEEQLGKALEGSDVVIIPAGVPRKPGMTRDDL 70 (295)
Q Consensus 2 ~~~~~~~e---i~L~D~~~------~~~~~~Dl~~~~~~--~~v~~~~~t~d~~~al~daDiVvi~~g~~~~~g~~r~~~ 70 (295)
++.++++| |+|+|.+. ++|++|||+|+.++ ..++++ +++ +++|+|||+||+++|.|++|||+|+|+
T Consensus 53 ~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~~~v~i~--~~~-y~~~~daDvVVitag~prkpG~tR~DL 129 (375)
T 7mdh_A 53 ASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIG--IDP-YEVFEDVDWALLIGAKPRGPGMERAAL 129 (375)
T ss_dssp HHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEE--SCH-HHHTTTCSEEEECCCCCCCTTCCHHHH
T ss_pred HcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhcCCcEEe--cCC-HHHhCCCCEEEEcCCCCCCCCCCHHHH
Confidence 45678887 77766533 59999999999753 244443 333 799999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhh-CCCeEEEEecCCccchHHHHHHHHHHhCCCCCCCeeec-chhhHHHHHHHHHhhcCCCCcc
Q 022546 71 FNINAGIVKSLCTAIANY-CPHALVNMISNPVNSTVPIAAEVFKKAGTYDEKKLFGV-TTLDVVRAKTFYAGKVNVPVAE 148 (295)
Q Consensus 71 ~~~n~~i~~~i~~~i~~~-~p~a~viv~tNP~d~~t~~~~~~~k~sg~~~~~kviG~-t~ld~~R~~~~la~~l~v~~~~ 148 (295)
+.+|++|++++++.|+++ +|+++++++|||+|++|+++ +|++| ++++|+||+ |.||++||+++||+++|++|++
T Consensus 130 l~~N~~I~k~i~~~i~~~a~p~~ivlVvsNPvD~~t~ia---~k~sg-~~~~rvig~gT~LDsaR~r~~lA~~lgv~~~~ 205 (375)
T 7mdh_A 130 LDINGQIFADQGKALNAVASKNVKVLVVGNPCNTNALIC---LKNAP-DIPAKNFHALTRLDENRAKCQLALKAGVFYDK 205 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHH---HHTCT-TSCGGGEEECCHHHHHHHHHHHHHHTTSCGGG
T ss_pred HHHHHHHHHHHHHHHHHhcCCCeEEEEecCchhHHHHHH---HHHcC-CCCccEEEeeehHHHHHHHHHHHHHhCcChhh
Confidence 999999999999999998 79999999999999999997 89898 566688898 9999999999999999999999
Q ss_pred ceE-EEeeCCCCceeeeccccCcCCCCC----CCHHHH--HHHHHHhhchhhhhhhhccCCCcchhh-HHHHHHHHHHHH
Q 022546 149 VNV-PVIGGHAGVTILPLFSQATPKSNN----LSDEEI--KALTKRTQDGGTEVVEAKAGKGSATLS-MAYAGAVFADAC 220 (295)
Q Consensus 149 v~~-~viG~hg~~~~vp~~s~~~v~~~~----~~~~~~--~~i~~~v~~~~~~i~~~~~~kg~~~~s-~a~a~~~~i~ai 220 (295)
|+. +||||||+ ++||+||++++++.+ ..++.| +++.++++++|++|++.| |.++|+ .|.++++.+.+|
T Consensus 206 V~~v~V~GeHgd-t~vp~~S~a~V~G~pl~~~~~~~~~~~~~i~~~v~~~g~eII~~k---G~ts~a~aa~~i~~~i~~~ 281 (375)
T 7mdh_A 206 VSNVTIWGNHST-TQVPDFLNAKIDGRPVKEVIKRTKWLEEEFTITVQKRGGALIQKW---GRSSAASTAVSIADAIKSL 281 (375)
T ss_dssp EECCEEEBCSST-TCEEECSSCEETTEEGGGTCCCHHHHHHHHHHHHHTHHHHHHHHT---SSCCHHHHHHHHHHHHHHH
T ss_pred cccceEEecCCC-ceeeeeecccCCCEEhhHhccchhhHHHHHHHHHHHHHHHHHHhc---CCCchHHHHHHHHHHHHHH
Confidence 985 89999998 999999999997642 233444 789999999999999964 555553 445556666666
Q ss_pred HcCcCCCCceeEEE-EeeC-CC--CCccEEEEeEEEcCCceEEEcc-CCCCCHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 022546 221 LMGLNGVPDIVECT-FVQS-SV--TELPFFASKVRLGKNGADEVLG-LGPLSDYEKQGLESLKPELKASIEKGIQFAN 293 (295)
Q Consensus 221 ~~~~~~~~~v~~~~-~~~g-~~--~~~~~~s~Pv~ig~~Gv~~v~~-~~~L~~~E~~~l~~s~~~l~~~~~~~~~~~~ 293 (295)
++|.+ ++.++|++ +++| +| ++++|||+||++|++|++++++ + +|+++|+++|++|+++|+++.+.+.+++.
T Consensus 282 l~g~d-~~~v~~vs~~~~G~~YGi~~dv~~s~P~vlg~~Gv~~iv~~l-~L~~~E~~~l~~Sa~~L~~e~~~~~~~~~ 357 (375)
T 7mdh_A 282 VTPTP-EGDWFSTGVYTTGNPYGIAEDIVFSMPCRSKGDGDYELATDV-SNDDFLWERIKKSEAELLAEKKCVAHLTG 357 (375)
T ss_dssp HSCCC-TTCCEEEEEECTTCSSCCCSSSEEEEEEECCSSSCCEECCCC-CCCHHHHHHHHHHHHHHHHHHHHTHHHHT
T ss_pred hcCCC-CCeEEEEEEEeCCccCCCCCceEEEEEEEEcCCeeEEecCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 66543 23588987 7899 68 5799999999999999999996 6 99999999999999999999998877764
No 16
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=100.00 E-value=1.2e-59 Score=428.27 Aligned_cols=272 Identities=23% Similarity=0.303 Sum_probs=244.7
Q ss_pred CCCCCcCeEEEEeCCC--chhHHHhhhCCCC-CCeEEEeeCCCchhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHH
Q 022546 2 KLDPLVSSLSLYDIAN--TPGVAADVSHINS-PAQVEGYAGEEQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIV 78 (295)
Q Consensus 2 ~~~~~~~ei~L~D~~~--~~~~~~Dl~~~~~-~~~v~~~~~t~d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~ 78 (295)
+++++++||+|+|+++ ++++++||+|+.. ...++... ++ +++++|||+||+++|.+++||++|++++.+|++++
T Consensus 20 ~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~--~~-~~a~~~aD~Vii~ag~~~~~g~~r~dl~~~n~~i~ 96 (310)
T 2xxj_A 20 ALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWA--GS-YGDLEGARAVVLAAGVAQRPGETRLQLLDRNAQVF 96 (310)
T ss_dssp HHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEE--CC-GGGGTTEEEEEECCCCCCCTTCCHHHHHHHHHHHH
T ss_pred HhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEE--CC-HHHhCCCCEEEECCCCCCCCCcCHHHHHHhhHHHH
Confidence 3567899999999987 7899999999852 12333333 24 68999999999999999999999999999999999
Q ss_pred HHHHHHHHhhCCCeEEEEecCCccchHHHHHHHHHHhCCCCCCCeeec-chhhHHHHHHHHHhhcCCCCccceEEEeeCC
Q 022546 79 KSLCTAIANYCPHALVNMISNPVNSTVPIAAEVFKKAGTYDEKKLFGV-TTLDVVRAKTFYAGKVNVPVAEVNVPVIGGH 157 (295)
Q Consensus 79 ~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~k~sg~~~~~kviG~-t~ld~~R~~~~la~~l~v~~~~v~~~viG~h 157 (295)
+++++.|+++||+||++++|||+|++|+++ +|.+| +|++||||+ |.||++|+++++|+++|++|++|+++|||||
T Consensus 97 ~~i~~~i~~~~p~a~iiv~tNPv~~~t~~~---~k~s~-~p~~rviG~gt~LD~~R~~~~la~~lgv~~~~v~~~v~G~H 172 (310)
T 2xxj_A 97 AQVVPRVLEAAPEAVLLVATNPVDVMTQVA---YALSG-LPPGRVVGSGTILDTARFRALLAEYLRVAPQSVHAYVLGEH 172 (310)
T ss_dssp HHHHHHHHHHCTTCEEEECSSSHHHHHHHH---HHHHT-CCGGGEEECTTHHHHHHHHHHHHHHHTSCGGGEEEEEEBCS
T ss_pred HHHHHHHHHHCCCcEEEEecCchHHHHHHH---HHHcC-CCHHHEEecCcchhHHHHHHHHHHHhCcCHHHeEEEEeccc
Confidence 999999999999999999999999999987 89998 999999999 9999999999999999999999999999999
Q ss_pred CCceeeeccccCcCCCCC-----------CCHHHHHHHHHHhhchhhhhhhhccCCCcchhhHHHHHHHHHHHHHcCcCC
Q 022546 158 AGVTILPLFSQATPKSNN-----------LSDEEIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAVFADACLMGLNG 226 (295)
Q Consensus 158 g~~~~vp~~s~~~v~~~~-----------~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~s~a~a~~~~i~ai~~~~~~ 226 (295)
|+ +++|+||++++++.+ ++++.++++.++++++++++++ +||+++|++|.++++++++|++|.+
T Consensus 173 G~-t~~p~~s~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~eii~---~kg~t~~~~a~a~~~~~~ai~~~~~- 247 (310)
T 2xxj_A 173 GD-SEVLVWSSAQVGGVPLLEFAEARGRALSPEDRARIDEGVRRAAYRIIE---GKGATYYGIGAGLARLVRAILTDEK- 247 (310)
T ss_dssp ST-TCEEEEEEEEETTEEHHHHHHHTTCCCCHHHHHHHHHHHHTHHHHHHH---HHSCCCHHHHHHHHHHHHHHHTTCC-
T ss_pred CC-ccccchhhccCCCEEHHHHhhhcccCCCHHHHHHHHHHHHHhhHHHHh---ccCCcHHHHHHHHHHHHHHHHcCCC-
Confidence 99 899999999886521 3566789999999999999999 4578999999999999999999964
Q ss_pred CCceeEEE-EeeCCC-CCccEEEEeEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 022546 227 VPDIVECT-FVQSSV-TELPFFASKVRLGKNGADEVLGLGPLSDYEKQGLESLKPELKASIEKG 288 (295)
Q Consensus 227 ~~~v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~~~ 288 (295)
.+++++ +++|+| .++++||+||++|++|+++++++ +|+++|+++|++|++.|++.+++.
T Consensus 248 --~~~~vs~~~~G~yg~~~~~~~vP~~ig~~Gv~~i~~~-~L~~~e~~~l~~s~~~l~~~~~~~ 308 (310)
T 2xxj_A 248 --GVYTVSAFTPEVAGVLEVSLSLPRILGAGGVAGTVYP-SLSPEERAALRRSAEILKEAAFAL 308 (310)
T ss_dssp --EEEEEEEEEEEETTEEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred --CEEEEEEEEcCccCCccEEEEEEEEEeCCeeEEEcCC-CCCHHHHHHHHHHHHHHHHHHHHh
Confidence 577887 789988 46899999999999999999997 999999999999999999988764
No 17
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=100.00 E-value=2e-59 Score=426.35 Aligned_cols=273 Identities=25% Similarity=0.417 Sum_probs=247.4
Q ss_pred CCCCcCeEEEEeCCC--chhHHHhhhCCC----CCCeEEEeeCCCchhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHH
Q 022546 3 LDPLVSSLSLYDIAN--TPGVAADVSHIN----SPAQVEGYAGEEQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAG 76 (295)
Q Consensus 3 ~~~~~~ei~L~D~~~--~~~~~~Dl~~~~----~~~~v~~~~~t~d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~ 76 (295)
+.++ +||+|+|+++ ++|.++|++|+. .+.+++. |+|+ ++++|||+||+++|.|++|||+|++++.+|++
T Consensus 20 ~~~l-~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~---t~d~-~a~~~aD~Vi~~ag~~~k~G~~r~dl~~~n~~ 94 (308)
T 2d4a_B 20 MRGY-DDLLLIARTPGKPQGEALDLAHAAAELGVDIRISG---SNSY-EDMRGSDIVLVTAGIGRKPGMTREQLLEANAN 94 (308)
T ss_dssp HHTC-SCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEE---ESCG-GGGTTCSEEEECCSCCCCSSCCTHHHHHHHHH
T ss_pred hCCC-CEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEE---CCCH-HHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHH
Confidence 3466 8999999987 789999999963 2345554 2464 89999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhCCCeEEEEecCCccchHHHHHHHHHHhCCCCCCCeeec-chhhHHHHHHHHHhhcCCCCccceEEEee
Q 022546 77 IVKSLCTAIANYCPHALVNMISNPVNSTVPIAAEVFKKAGTYDEKKLFGV-TTLDVVRAKTFYAGKVNVPVAEVNVPVIG 155 (295)
Q Consensus 77 i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~k~sg~~~~~kviG~-t~ld~~R~~~~la~~l~v~~~~v~~~viG 155 (295)
+++++++.|++++|+||+|++|||+|++|+++ +|++| +|++||||+ |.||++|+++++|+++|++|++|+++|||
T Consensus 95 i~~~i~~~i~~~~p~a~iiv~tNPv~~~t~~~---~k~~~-~p~~rviG~gt~LD~~R~~~~la~~lgv~~~~v~~~v~G 170 (308)
T 2d4a_B 95 TMADLAEKIKAYAKDAIVVITTNPVDAMTYVM---YKKTG-FPRERVIGFSGILDSARMAYYISQKLGVSFKSVNAIVLG 170 (308)
T ss_dssp HHHHHHHHHHHHCTTCEEEECCSSHHHHHHHH---HHHHC-CCGGGEEECCHHHHHHHHHHHHHHHHTSCGGGEECCEEB
T ss_pred HHHHHHHHHHHHCCCeEEEEeCCchHHHHHHH---HHhcC-CChhhEEEecccchHHHHHHHHHHHhCcChhHeEEEEEe
Confidence 99999999999999999999999999999987 78888 999999999 99999999999999999999999999999
Q ss_pred CCCCceeeeccccCcCCCCC----CCHHHHHHHHHHhhchhhhhhhhccCCC-cchhhHHHHHHHHHHHHHcCcCCCCce
Q 022546 156 GHAGVTILPLFSQATPKSNN----LSDEEIKALTKRTQDGGTEVVEAKAGKG-SATLSMAYAGAVFADACLMGLNGVPDI 230 (295)
Q Consensus 156 ~hg~~~~vp~~s~~~v~~~~----~~~~~~~~i~~~v~~~~~~i~~~~~~kg-~~~~s~a~a~~~~i~ai~~~~~~~~~v 230 (295)
|||+ +++|+||++++++.+ +++++++++.++++++++++++ +|| +++||+|.++++++++|++|++ .+
T Consensus 171 ~Hg~-t~~p~~s~~~v~g~~~~~~~~~~~~~~~~~~v~~~g~eii~---~kg~s~~~~~a~a~~~~~~ai~~~~~---~v 243 (308)
T 2d4a_B 171 MHGQ-KMFPVPRLSSVGGVPLEHLMSKEEIEEVVSETVNAGAKITE---LRGYSSNYGPAAGLVLTVEAIKRDSK---RI 243 (308)
T ss_dssp CSST-TCEECGGGCEETTEEHHHHSCHHHHHHHHHHHHTHHHHHHH---HHSSCCCHHHHHHHHHHHHHHHTTCC---EE
T ss_pred ccCC-ceeeeehhccCCCEEHHHHcCHHHHHHHHHHHHHhhHhhhh---CCCCccHHHHHHHHHHHHHHHHhCCC---cE
Confidence 9998 899999999987643 4677899999999999999999 457 8999999999999999999974 58
Q ss_pred eEEE-EeeCCC-CCccEEEEeEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHHhhhh
Q 022546 231 VECT-FVQSSV-TELPFFASKVRLGKNGADEVLGLGPLSDYEKQGLESLKPELKASIEKGIQFA 292 (295)
Q Consensus 231 ~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~~~~~~~ 292 (295)
++++ +++|+| .++++||+||++|++|+++++++ +|+++|+++|++|++.|++.+++...++
T Consensus 244 ~~vs~~~~G~yg~~~~~~~vP~~ig~~Gv~~i~~~-~L~~~e~~~l~~s~~~l~~~~~~~~~~l 306 (308)
T 2d4a_B 244 YPYSLYLQGEYGYNDIVAEVPAVIGKSGIERIIEL-PLTEDEKRKFDEAVQAVKKLVETLPPQL 306 (308)
T ss_dssp EEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHHHTSCHHH
T ss_pred EEEEEEEcCccCCCceEEEEEEEEcCCceEEecCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 8886 889998 57999999999999999999997 9999999999999999999998776554
No 18
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=100.00 E-value=2.4e-59 Score=429.20 Aligned_cols=282 Identities=24% Similarity=0.347 Sum_probs=243.3
Q ss_pred CCCCCcCe-----EEEEeCCC----chhHHHhhhCCCCCCeEEEeeCCCchhhhcCCCcEEEEcCCCCCCCCCCHHHHHH
Q 022546 2 KLDPLVSS-----LSLYDIAN----TPGVAADVSHINSPAQVEGYAGEEQLGKALEGSDVVIIPAGVPRKPGMTRDDLFN 72 (295)
Q Consensus 2 ~~~~~~~e-----i~L~D~~~----~~~~~~Dl~~~~~~~~v~~~~~t~d~~~al~daDiVvi~~g~~~~~g~~r~~~~~ 72 (295)
+..++++| |+|+|+++ ++|+++||+|+.++. +.....+++.+++++|||+||+++|.|++|||+|++++.
T Consensus 24 ~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~-~~~~~~~~~~~~~~~daDvVvitAg~prkpG~tR~dll~ 102 (333)
T 5mdh_A 24 GNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPL-LKDVIATDKEEIAFKDLDVAILVGSMPRRDGMERKDLLK 102 (333)
T ss_dssp HTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTT-EEEEEEESCHHHHTTTCSEEEECCSCCCCTTCCTTTTHH
T ss_pred HhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcc-cCCEEEcCCcHHHhCCCCEEEEeCCCCCCCCCCHHHHHH
Confidence 45677888 99999974 689999999986432 222223345579999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhCCCe-EEEEecCCccchHHHHHHHHHHhCCCCCCCeeec-chhhHHHHHHHHHhhcCCCCccce
Q 022546 73 INAGIVKSLCTAIANYCPHA-LVNMISNPVNSTVPIAAEVFKKAGTYDEKKLFGV-TTLDVVRAKTFYAGKVNVPVAEVN 150 (295)
Q Consensus 73 ~n~~i~~~i~~~i~~~~p~a-~viv~tNP~d~~t~~~~~~~k~sg~~~~~kviG~-t~ld~~R~~~~la~~l~v~~~~v~ 150 (295)
+|+++++++++.+++++|++ |++++|||+|++|+++ +|++|.+|+ |+||. |.||++||++++|+++|++|++|+
T Consensus 103 ~N~~i~~~i~~~i~~~~~~~~~vivvsNPvd~~t~~~---~~~~~~~p~-~~ig~~t~LDs~R~~~~la~~l~v~~~~v~ 178 (333)
T 5mdh_A 103 ANVKIFKCQGAALDKYAKKSVKVIVVGNPANTNCLTA---SKSAPSIPK-ENFSCLTRLDHNRAKAQIALKLGVTSDDVK 178 (333)
T ss_dssp HHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHH---HHTCTTSCG-GGEEECCHHHHHHHHHHHHHHHTCCGGGEE
T ss_pred HHHHHHHHHHHHHHHhCCCCeEEEEcCCchHHHHHHH---HHHcCCCCc-CEEEEEEhHHHHHHHHHHHHHhCcCHHHee
Confidence 99999999999999999998 7999999999999987 788874555 55776 999999999999999999999999
Q ss_pred EE-EeeCCCCceeeeccccCcC--CCCCCC------HHH--HHHHHHHhhchhhhhhhhccCCCcchhhHHHHHHHHHHH
Q 022546 151 VP-VIGGHAGVTILPLFSQATP--KSNNLS------DEE--IKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAVFADA 219 (295)
Q Consensus 151 ~~-viG~hg~~~~vp~~s~~~v--~~~~~~------~~~--~~~i~~~v~~~~~~i~~~~~~kg~~~~s~a~a~~~~i~a 219 (295)
++ ||||||+ +++|+||++++ ++.+++ ++. .+++.++++++|++|++.| ++++.|++|.++++++++
T Consensus 179 ~~vV~GeHgd-s~vp~~S~a~v~i~g~~~~~~~~~~~~~~~~~~~~~~v~~~g~eIi~~k--~~ssa~~~a~~~~~~~~~ 255 (333)
T 5mdh_A 179 NVIIWGNHSS-TQYPDVNHAKVKLQAKEVGVYEAVKDDSWLKGEFITTVQQRGAAVIKAR--KLSSAMSAAKAICDHVRD 255 (333)
T ss_dssp CCEEEBCSST-TCEEECTTCEEECSSCEEEHHHHHCCHHHHHTHHHHHHHHHHHHHHHHH--SSCCCHHHHHHHHHHHHH
T ss_pred ecEEEEcCCC-CEEEeeeccEeccCCeeccHHHhhccccccHHHHHHHHHHHHHHHHHcc--CchHHHHHHHHHHHHHHH
Confidence 87 5999999 89999999975 443232 223 3689999999999999964 357899999999999999
Q ss_pred HHcCcCCCCceeEEE-EeeC-CC--CCccEEEEeEEEcCCceEEEcc-CCCCCHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 022546 220 CLMGLNGVPDIVECT-FVQS-SV--TELPFFASKVRLGKNGADEVLG-LGPLSDYEKQGLESLKPELKASIEKGIQFANR 294 (295)
Q Consensus 220 i~~~~~~~~~v~~~~-~~~g-~~--~~~~~~s~Pv~ig~~Gv~~v~~-~~~L~~~E~~~l~~s~~~l~~~~~~~~~~~~~ 294 (295)
|++|++. +.++|++ +++| +| ++++|||+||++ ++|++++++ + +|+++|+++|++|++.|+++++++++|+..
T Consensus 256 il~~~~~-~~v~~~s~~~~G~~YGi~~~v~~s~P~~~-~~Gv~~iv~~l-~L~~~E~~~l~~sa~~L~~~~~~~~~~l~~ 332 (333)
T 5mdh_A 256 IWFGTPE-GEFVSMGIISDGNSYGVPDDLLYSFPVTI-KDKTWKIVEGL-PINDFSREKMDLTAKELAEEKETAFEFLSS 332 (333)
T ss_dssp HHHCCCT-TCCEEEEEECTTCSSSCCSSCEEEEEEEE-ETTEEEECCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCCC-CeEEEEEEecCCcccCCCCCeEEEEEEEE-cCCeEEEcCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999753 2588987 6799 88 479999999999 999999998 7 999999999999999999999999999863
No 19
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=100.00 E-value=1.4e-57 Score=417.46 Aligned_cols=285 Identities=64% Similarity=1.022 Sum_probs=256.7
Q ss_pred CCCCcCeEEEEeCCCchhHHHhhhCCCCCCeEEEeeCCCchhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHH
Q 022546 3 LDPLVSSLSLYDIANTPGVAADVSHINSPAQVEGYAGEEQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLC 82 (295)
Q Consensus 3 ~~~~~~ei~L~D~~~~~~~~~Dl~~~~~~~~v~~~~~t~d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~i~ 82 (295)
.++++.||+|+|+++..+.++||.|...+.++....+++|++++++|||+||+++|.++++|++|.+++.+|++++++++
T Consensus 30 ~~g~~~ev~l~Di~~~~~~~~dL~~~~~~~~v~~~~~t~d~~~al~gaDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~ 109 (326)
T 1smk_A 30 MNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFLGQQQLEAALTGMDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLC 109 (326)
T ss_dssp HCTTEEEEEEEESSSHHHHHHHHHTSCSSCEEEEEESHHHHHHHHTTCSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHH
T ss_pred hCCCCCEEEEEeCCCcHhHHHHhhcccccceEEEEeCCCCHHHHcCCCCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHH
Confidence 45778999999998778899999997654466654455688899999999999999999999999999999999999999
Q ss_pred HHHHhhCCCeEEEEecCCccchHHHHHHH-HHHhCCCCCCCeeecchhhHHHHHHHHHhhcCCCCccceEEEeeCC-CCc
Q 022546 83 TAIANYCPHALVNMISNPVNSTVPIAAEV-FKKAGTYDEKKLFGVTTLDVVRAKTFYAGKVNVPVAEVNVPVIGGH-AGV 160 (295)
Q Consensus 83 ~~i~~~~p~a~viv~tNP~d~~t~~~~~~-~k~sg~~~~~kviG~t~ld~~R~~~~la~~l~v~~~~v~~~viG~h-g~~ 160 (295)
+.+++++|++|++++|||+|++|++++++ +|.+| ||++||||+|.||++|+++++|+++|++|++|+++||||| |+
T Consensus 110 ~~i~~~~p~~~viv~SNPv~~~~~~~t~~~~~~~~-~p~~rviG~~~Ld~~r~~~~la~~l~v~~~~v~~~v~G~H~G~- 187 (326)
T 1smk_A 110 EGIAKCCPRAIVNLISNPVNSTVPIAAEVFKKAGT-YDPKRLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGV- 187 (326)
T ss_dssp HHHHHHCTTSEEEECCSSHHHHHHHHHHHHHHHTC-CCTTSEEECCHHHHHHHHHHHHHHHTCCGGGCBCCEEECSSGG-
T ss_pred HHHHhhCCCeEEEEECCchHHHHHHHHHHHHHccC-CCcccEEEEeehHHHHHHHHHHHHhCcChhheEEEEecccCCc-
Confidence 99999999999999999999977766554 45667 9999999999999999999999999999999999999999 76
Q ss_pred eeeeccccCcCCCCCCCHHHHHHHHHHhhchhhhhhhhccCCCcchhhHHHHHHHHHHHH---HcCcCCCCceeEEEEee
Q 022546 161 TILPLFSQATPKSNNLSDEEIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAVFADAC---LMGLNGVPDIVECTFVQ 237 (295)
Q Consensus 161 ~~vp~~s~~~v~~~~~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~s~a~a~~~~i~ai---~~~~~~~~~v~~~~~~~ 237 (295)
+++|+||++++.. .+++++++++.++++++++++++.|.|+|+++||+|.++++++++| ++|++ .++++++++
T Consensus 188 ~~~p~~s~~~v~~-~~~~~~~~~~~~~v~~~g~eii~~k~~~gs~~~~~a~a~~~~~~ai~~~~~~~~---~v~~~~~~~ 263 (326)
T 1smk_A 188 TILPLLSQVKPPS-SFTQEEISYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDA---GVIECAFVS 263 (326)
T ss_dssp GEEECGGGCBSCC-CCCHHHHHHHHHHHHHHHHHHHHHTTTSCCCCHHHHHHHHHHHHHHHHHHHTCS---CEEEEEEEE
T ss_pred eEEEecccCeecC-cCCHHHHHHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHHHHHHHHhCCCC---eEEEEEeec
Confidence 8999999998864 3788889999999999999999976677999999999999999999 88764 588888889
Q ss_pred CCCCCccEEEEeEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 022546 238 SSVTELPFFASKVRLGKNGADEVLGLGPLSDYEKQGLESLKPELKASIEKGIQFAN 293 (295)
Q Consensus 238 g~~~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~~~~~~~~ 293 (295)
|+|+++++||+||++|++|++++++.++|+++|+++|++|++.|++.++++.+|+-
T Consensus 264 g~~~~~~~~~vP~~ig~~Gv~~i~~~~~L~~~e~~~l~~s~~~l~~~~~~~~~~~~ 319 (326)
T 1smk_A 264 SQVTELPFFASKVRLGRNGIEEVYSLGPLNEYERIGLEKAKKELAGSIEKGVSFIR 319 (326)
T ss_dssp CCSSSSSEEEEEEEEETTEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred cccCCceEEEEEEEEeCCeeEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98888999999999999999999993399999999999999999999999998863
No 20
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=100.00 E-value=2.5e-58 Score=422.99 Aligned_cols=271 Identities=25% Similarity=0.310 Sum_probs=224.0
Q ss_pred CeEEEEeCCC----chhHHHhhhCCCCCCeEEEeeCCCchhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q 022546 8 SSLSLYDIAN----TPGVAADVSHINSPAQVEGYAGEEQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCT 83 (295)
Q Consensus 8 ~ei~L~D~~~----~~~~~~Dl~~~~~~~~v~~~~~t~d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~i~~ 83 (295)
.||+|+|+++ ++|.++||+|++++.......+ +|.+++|+|||+||+++|.||+|||+|+|++.+|++|++++++
T Consensus 56 ~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~-~~~~~a~~~advVvi~aG~prkpGmtR~DLl~~Na~I~~~~~~ 134 (345)
T 4h7p_A 56 VELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVT-ADPRVAFDGVAIAIMCGAFPRKAGMERKDLLEMNARIFKEQGE 134 (345)
T ss_dssp EEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEE-SCHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred cEEEEECCCCccccchhhhhhhhhcCccCCCcEEEc-CChHHHhCCCCEEEECCCCCCCCCCCHHHHHHHhHHHHHHHHH
Confidence 4999999986 4799999999987655554443 4568999999999999999999999999999999999999999
Q ss_pred HHHhhC-CCeEEEEecCCccchHHHHHHHHHH-hCCCCCCCeeec-chhhHHHHHHHHHhhcCCCCccce-EEEeeCCCC
Q 022546 84 AIANYC-PHALVNMISNPVNSTVPIAAEVFKK-AGTYDEKKLFGV-TTLDVVRAKTFYAGKVNVPVAEVN-VPVIGGHAG 159 (295)
Q Consensus 84 ~i~~~~-p~a~viv~tNP~d~~t~~~~~~~k~-sg~~~~~kviG~-t~ld~~R~~~~la~~l~v~~~~v~-~~viG~hg~ 159 (295)
.|.+++ |+++++++|||+|++++++ +++ +| +|++|+||. |.||++||+++||+++|++|++|+ .+|||+||+
T Consensus 135 ~i~~~a~~~~~vlvvsNPvd~~~~i~---~~~~~g-~~~~r~i~~~t~LDs~R~~~~la~~~~v~~~~V~~~~V~G~HG~ 210 (345)
T 4h7p_A 135 AIAAVAASDCRVVVVGNPANTNALIL---LKSAQG-KLNPRHVTAMTRLDHNRALSLLARKAGVPVSQVRNVIIWGNHSS 210 (345)
T ss_dssp HHHHHSCTTCEEEECSSSHHHHHHHH---HHHTTT-CSCGGGEEECCHHHHHHHHHHHHHHHTSCGGGEECCEEEBCSST
T ss_pred HHHhhccCceEEEEeCCCcchHHHHH---HHHccC-CCCcceeeeccchhHHHHHHHHHHHHCcChhheecceeecCCCC
Confidence 999997 8899999999999999987 565 46 666666666 999999999999999999999997 578999999
Q ss_pred ceeeeccccCcCCCCC----CCHHHH-HHHHHHhhchhhhhhhhccCCCcchhhHHHHHHHHHHHHHcCcCCCCceeEEE
Q 022546 160 VTILPLFSQATPKSNN----LSDEEI-KALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAVFADACLMGLNGVPDIVECT 234 (295)
Q Consensus 160 ~~~vp~~s~~~v~~~~----~~~~~~-~~i~~~v~~~~~~i~~~~~~kg~~~~s~a~a~~~~i~ai~~~~~~~~~v~~~~ 234 (295)
+++|+||++++++.+ ++++.+ +++.++++++|++|++.| +++++||+|.++++++++|++|.+...+ +++.
T Consensus 211 -t~vp~~s~a~v~g~~~~~~~~~~~~~~~~~~~v~~~g~eIi~~k--g~ss~~s~a~a~~~~~~~~l~~~~~~~~-vs~~ 286 (345)
T 4h7p_A 211 -TQVPDTDSAVIGTTPAREAIKDDALDDDFVQVVRGRGAEIIQLR--GLSSAMSAAKAAVDHVHDWIHGTPEGVY-VSMG 286 (345)
T ss_dssp -TCEEECTTCEETTEEGGGGCCC------HHHHHHHHHHHHHHHH--SSCCCHHHHHHHHHHHHHHHHCCCTTCC-EEEE
T ss_pred -eEEeeeccceECCccHHHhcchhhHHHHHHHHHHhhhhhhhhcC--CCcchhhHHHHHHHHHHHHhcCCCCceE-EEEE
Confidence 999999999997642 222333 579999999999999976 3578999999999999999999875432 2323
Q ss_pred -Ee-eCCC--CCccEEEEeEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 022546 235 -FV-QSSV--TELPFFASKVRLGKNGADEVLGLGPLSDYEKQGLESLKPELKASIEKG 288 (295)
Q Consensus 235 -~~-~g~~--~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~~~ 288 (295)
++ +|+| ++++|||+||++| +|.+++++..+|+++|+++|++|+++|+++.+.+
T Consensus 287 v~s~~g~YGi~~~v~~s~Pv~~~-~G~~~iv~~l~l~~~e~~~l~~s~~~L~~E~~~A 343 (345)
T 4h7p_A 287 VYSDENPYGVPSGLIFSFPCTCH-AGEWTVVSGKLNGDLGKQRLASTIAELQEERAQA 343 (345)
T ss_dssp EECTTCTTCCCSSCEEEEEEEEE-TTEEEECCSCC-----CGGGHHHHHHHHHHHHHT
T ss_pred EEeCCCCcCCCCCEEEEEEEEEe-CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHc
Confidence 44 5888 6899999999997 6788888755899999999999999999987654
No 21
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=100.00 E-value=1.2e-60 Score=435.21 Aligned_cols=259 Identities=21% Similarity=0.285 Sum_probs=233.6
Q ss_pred CCCCCcCeEEEEeCCC--chhHHHhhhCCCC---CCeEEEeeCCCchhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHH
Q 022546 2 KLDPLVSSLSLYDIAN--TPGVAADVSHINS---PAQVEGYAGEEQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAG 76 (295)
Q Consensus 2 ~~~~~~~ei~L~D~~~--~~~~~~Dl~~~~~---~~~v~~~~~t~d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~ 76 (295)
++.++++||+|+|+++ ++|+++||+|+.. ..++.. ++|+ ++++|||+||+++|.|++|||+|++++.+|++
T Consensus 41 a~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~---t~d~-~~~~daDiVIitaG~p~kpG~tR~dll~~N~~ 116 (330)
T 3ldh_A 41 LMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVS---GKDY-SVSAGSKLVVITAGARQQEGESRLNLVQRNVN 116 (330)
T ss_dssp HHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEE---ESSS-CSCSSCSEEEECCSCCCCSSCCTTGGGHHHHH
T ss_pred HhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEE---cCCH-HHhCCCCEEEEeCCCCCCCCCCHHHHHHhhHH
Confidence 3467889999999987 7999999999742 234443 3465 67999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhCCCeEEEEecCCccchHHHHHHHHHHhCCCCCCCeeec-chhhHHHHHHHHHhhcCCCCccceEEEee
Q 022546 77 IVKSLCTAIANYCPHALVNMISNPVNSTVPIAAEVFKKAGTYDEKKLFGV-TTLDVVRAKTFYAGKVNVPVAEVNVPVIG 155 (295)
Q Consensus 77 i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~k~sg~~~~~kviG~-t~ld~~R~~~~la~~l~v~~~~v~~~viG 155 (295)
+++++++.|++++|+||++++|||+|++|+++ +|.+| ||++||||+ |.||++||++++|+++|++|++|+++|||
T Consensus 117 I~k~i~~~I~k~~P~a~ilvvtNPvdi~t~~~---~k~sg-~p~~rViG~gt~LDs~R~~~~lA~~lgv~~~~V~~~V~G 192 (330)
T 3ldh_A 117 IFKFIIPNIVKHSPDCLKELHPELGTDKNKQD---WKLSG-LPMHRIIGSGCNLDSARFRYLMGERLGVHSCLVIGWVIG 192 (330)
T ss_dssp HHHHHHHHHHHHCTTCEEEECSSSHHHHHHHH---HHHHC-CCGGGEECCTTHHHHHHHHHHHHHHHTSCTTTCCEEECS
T ss_pred HHHHHHHHHHhhCCCceEEeCCCccHHHHHHH---HHHhC-CCHHHeecccCchhHHHHHHHHHHHhCCCHHHeEEEEEc
Confidence 99999999999999999999999999999987 89998 999999999 89999999999999999999999999999
Q ss_pred CCCCceeeeccccCcCCCCCCCHHHHHHHHHHhhchhhhhhhhccCCCcchhhHHH-----------------HHHHHHH
Q 022546 156 GHAGVTILPLFSQATPKSNNLSDEEIKALTKRTQDGGTEVVEAKAGKGSATLSMAY-----------------AGAVFAD 218 (295)
Q Consensus 156 ~hg~~~~vp~~s~~~v~~~~~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~s~a~-----------------a~~~~i~ 218 (295)
|||+ +++|+||+ . + .+++.++++++|++|++ +||+++||+|. +++++++
T Consensus 193 ~Hg~-t~vp~~S~-~-----~----~~~~~~~v~~~g~eii~---~kg~t~~a~a~~~~~~~~~~~~~~~~~~a~~~~~~ 258 (330)
T 3ldh_A 193 QHGD-SVPSVWSG-M-----W----DAKLHKDVVDSAYEVIK---LKGYTSWAIGLVVSNPVDVLTYVAWKGCSVADLAQ 258 (330)
T ss_dssp SSST-TCCEEEEE-E-----E----ETTEEHHHHHCCCTTST---TCHHHHHHHHHTTHHHHTTSSSCSCTHHHHHHHHH
T ss_pred CCCC-ceeeechh-h-----H----HHHHHHHHHHHHHHHHH---ccCCcceeeeeeccCccchhhhhhhHHHHHHHHHH
Confidence 9999 99999998 1 1 15778889999999999 46899999999 9999999
Q ss_pred HHHcCcCCCCceeEEE-EeeCCC--CCccEEEEeEEEcCCceEE--EccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 022546 219 ACLMGLNGVPDIVECT-FVQSSV--TELPFFASKVRLGKNGADE--VLGLGPLSDYEKQGLESLKPELKASIEK 287 (295)
Q Consensus 219 ai~~~~~~~~~v~~~~-~~~g~~--~~~~~~s~Pv~ig~~Gv~~--v~~~~~L~~~E~~~l~~s~~~l~~~~~~ 287 (295)
+|+.|.+ .++|++ +++|+| ++++|||+||++| +|+++ ++++ +|+++|+++|++|++.|++.++.
T Consensus 259 ail~~~~---~v~~~s~~~~g~yg~~~~v~~s~P~~lg-~Gv~~~~iv~~-~L~~~E~~~l~~s~~~l~~~~~~ 327 (330)
T 3ldh_A 259 TIMKDLC---RVHPVSTMVKDFYGIKDNVFLSLPCVLN-NGISHCNIVKM-KLKPDEEQQLQKSATTLWDIQKD 327 (330)
T ss_dssp HHHHTCC---EEECCBCCCSSSSSCCSCCCCBCCEEEB-TTBCTTCCCCC-CCCHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHcCCC---ceEEEEeecCCccCCCCceEEEEEEEEC-CcEEEcceecC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999864 588887 789998 4599999999999 99999 9997 99999999999999999987764
No 22
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=100.00 E-value=4.7e-58 Score=419.19 Aligned_cols=273 Identities=26% Similarity=0.368 Sum_probs=235.9
Q ss_pred CCCCCcCeEEEEeCCC--chhHHHhhhCCCC-CCeEEEeeCCCchhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHH
Q 022546 2 KLDPLVSSLSLYDIAN--TPGVAADVSHINS-PAQVEGYAGEEQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIV 78 (295)
Q Consensus 2 ~~~~~~~ei~L~D~~~--~~~~~~Dl~~~~~-~~~v~~~~~t~d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~ 78 (295)
+++++++||+|+|+++ ++|+++||+|+.. ...++... ++ +++++|||+||++++.|+++|++|++++.+|++++
T Consensus 27 ~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~--~~-~~a~~~aDvVii~~g~p~k~g~~r~dl~~~n~~i~ 103 (318)
T 1y6j_A 27 ALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYA--GD-YSDVKDCDVIVVTAGANRKPGETRLDLAKKNVMIA 103 (318)
T ss_dssp HHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC----C-GGGGTTCSEEEECCCC------CHHHHHHHHHHHH
T ss_pred HhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEE--CC-HHHhCCCCEEEEcCCCCCCCCcCHHHHHHhhHHHH
Confidence 3567889999999987 7899999999852 12444433 34 68999999999999999999999999999999999
Q ss_pred HHHHHHHHhhCCCeEEEEecCCccchHHHHHHHHHHhCCCCCCCeeec-chhhHHHHHHHHHhhcCCCCccceEEEeeCC
Q 022546 79 KSLCTAIANYCPHALVNMISNPVNSTVPIAAEVFKKAGTYDEKKLFGV-TTLDVVRAKTFYAGKVNVPVAEVNVPVIGGH 157 (295)
Q Consensus 79 ~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~k~sg~~~~~kviG~-t~ld~~R~~~~la~~l~v~~~~v~~~viG~h 157 (295)
+++++.|++++|++|++++|||+|++|+++ +|++| +|++||||+ |.||++|+++++|+++|++|++|+++|||||
T Consensus 104 ~~i~~~i~~~~p~a~viv~tNPv~~~~~~~---~k~s~-~p~~rviG~gt~Ld~~r~~~~la~~lgv~~~~v~~~v~G~H 179 (318)
T 1y6j_A 104 KEVTQNIMKYYNHGVILVVSNPVDIITYMI---QKWSG-LPVGKVIGSGTVLDSIRFRYLLSEKLGVDVKNVHGYIIGEH 179 (318)
T ss_dssp HHHHHHHHHHCCSCEEEECSSSHHHHHHHH---HHHHT-CCTTTEEECTTHHHHHHHHHHHHTTTTCCTTTEECCEEBCS
T ss_pred HHHHHHHHHhCCCcEEEEecCcHHHHHHHH---HHHcC-CCHHHEeccCCchHHHHHHHHHHHHhCCCHHHeEEEEeccc
Confidence 999999999999999999999999999987 79998 999999999 9999999999999999999999999999999
Q ss_pred CCceeeeccccCcCCCCCC-----------CHHHHHHHHHHhhchhhhhhhhccCCCcchhhHHHHHHHHHHHHHcCcCC
Q 022546 158 AGVTILPLFSQATPKSNNL-----------SDEEIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAVFADACLMGLNG 226 (295)
Q Consensus 158 g~~~~vp~~s~~~v~~~~~-----------~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~s~a~a~~~~i~ai~~~~~~ 226 (295)
|+ +++|+||++++++.++ +++.++++.++++++++++++ +||+++|++|.++++++++|++|++
T Consensus 180 G~-t~~p~~s~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~eii~---~kg~t~~~~a~a~~~~~~ai~~~~~- 254 (318)
T 1y6j_A 180 GD-SQLPLWSCTHIAGKNINEYIDDPKCNFTEEDKKKIAEDVKTAGATIIK---NKGATYYGIAVSINTIVETLLKNQN- 254 (318)
T ss_dssp SS-SCEECCTTCEETTBCSCCC-----------CCHHHHHHHHHHHHHHHH---HTSCCCHHHHHHHHHHHHHHHHTCC-
T ss_pred CC-cEeeeehhceECCEEHHHHhhhhcccCCHHHHHHHHHHHHHhhHhHhh---CCCccHHHHHHHHHHHHHHHHcCCC-
Confidence 99 9999999998865322 233367999999999999999 5688999999999999999999964
Q ss_pred CCceeEEE-EeeCCC-CCccEEEEeEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHHh
Q 022546 227 VPDIVECT-FVQSSV-TELPFFASKVRLGKNGADEVLGLGPLSDYEKQGLESLKPELKASIEKGI 289 (295)
Q Consensus 227 ~~~v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~~~~ 289 (295)
.+++++ +++|+| .++++||+||++|++|+++++++ +|+++|+++|++|++.|++.+++..
T Consensus 255 --~~~~~~~~~~G~yg~~~~~~~vP~~ig~~Gv~~i~~~-~L~~~e~~~l~~s~~~l~~~~~~~~ 316 (318)
T 1y6j_A 255 --TIRTVGTVINGMYGIEDVAISLPSIVNSEGVQEVLQF-NLTPEEEEALRFSAEQVKKVLNEVK 316 (318)
T ss_dssp --CEECCEEEECSBTTBCSEEEECCEEEETTEEEECCCC-CCCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred --cEEEEEEeecCccCCcceEEEEEEEEcCCeeEEEecC-CCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 477776 789988 57899999999999999999997 9999999999999999999988653
No 23
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=100.00 E-value=2.9e-58 Score=420.52 Aligned_cols=272 Identities=23% Similarity=0.366 Sum_probs=242.1
Q ss_pred CCCCcCeEEEEeCCC--chhHHHhhhCCCC--CCeEEEeeCCCchhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHH
Q 022546 3 LDPLVSSLSLYDIAN--TPGVAADVSHINS--PAQVEGYAGEEQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIV 78 (295)
Q Consensus 3 ~~~~~~ei~L~D~~~--~~~~~~Dl~~~~~--~~~v~~~~~t~d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~ 78 (295)
++++++||+|+|+++ +++.++||+|+.. ...++... ++ +++++|||+||+++|.|+++|++|++++.+|++++
T Consensus 27 ~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~--~~-~~a~~~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~ 103 (317)
T 3d0o_A 27 NQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA--GE-YSDCHDADLVVICAGAAQKPGETRLDLVSKNLKIF 103 (317)
T ss_dssp HHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE--CC-GGGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHH
T ss_pred hCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEe--CC-HHHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHH
Confidence 456789999999987 7889999998631 12334433 23 68999999999999999999999999999999999
Q ss_pred HHHHHHHHhhCCCeEEEEecCCccchHHHHHHHHHHhCCCCCCCeeec-chhhHHHHHHHHHhhcCCCCccceEEEeeCC
Q 022546 79 KSLCTAIANYCPHALVNMISNPVNSTVPIAAEVFKKAGTYDEKKLFGV-TTLDVVRAKTFYAGKVNVPVAEVNVPVIGGH 157 (295)
Q Consensus 79 ~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~k~sg~~~~~kviG~-t~ld~~R~~~~la~~l~v~~~~v~~~viG~h 157 (295)
+++++.|++++|++|++++|||+|++|+++ +|.+| +|++||||+ |.||++|+++++|+++|++|++|+++|||||
T Consensus 104 ~~i~~~i~~~~p~a~viv~tNPv~~~t~~~---~k~~~-~p~~rviG~gt~lD~~r~~~~la~~l~v~~~~v~~~v~G~H 179 (317)
T 3d0o_A 104 KSIVGEVMASKFDGIFLVATNPVDILAYAT---WKFSG-LPKERVIGSGTILDSARFRLLLSEAFDVAPRSVDAQIIGEH 179 (317)
T ss_dssp HHHHHHHHHTTCCSEEEECSSSHHHHHHHH---HHHHC-CCGGGEEECTTHHHHHHHHHHHHHHHTSCGGGCBCCEEBCS
T ss_pred HHHHHHHHHhCCCcEEEEecCcHHHHHHHH---HHHhC-CCHHHEEecCccccHHHHHHHHHHHhCcChhhEEEEEEecC
Confidence 999999999999999999999999999987 89998 999999999 9999999999999999999999999999999
Q ss_pred CCceeeeccccCcCCCCC---------CCHHHHHHHHHHhhchhhhhhhhccCCCcchhhHHHHHHHHHHHHHcCcCCCC
Q 022546 158 AGVTILPLFSQATPKSNN---------LSDEEIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAVFADACLMGLNGVP 228 (295)
Q Consensus 158 g~~~~vp~~s~~~v~~~~---------~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~s~a~a~~~~i~ai~~~~~~~~ 228 (295)
|+ +++|+||++++++.+ ++++.++++.++++++++++++ +||+++|++|.++++++++|++|.+
T Consensus 180 G~-t~~p~~s~~~v~g~~~~~~~~~~~~~~~~~~~~~~~v~~~g~eii~---~kg~~~~~~a~a~~~~~~ai~~~~~--- 252 (317)
T 3d0o_A 180 GD-TELPVWSHANIAGQPLKTLLEQRPEGKAQIEQIFVQTRDAAYDIIQ---AKGATYYGVAMGLARITEAIFRNED--- 252 (317)
T ss_dssp ST-TCEECTTTCEETTEEHHHHHHTSTTHHHHHHHHHHHHHTHHHHHHH---HHSCCCHHHHHHHHHHHHHHHTTCC---
T ss_pred CC-CeeEeeeccccCCEEHHHHhhccCCCHHHHHHHHHHHHhhhhEEEe---CCCCchHhHHHHHHHHHHHHHcCCC---
Confidence 99 999999999886532 3445678999999999999999 4588999999999999999999964
Q ss_pred ceeEEE-EeeCCC-CCccEEEEeEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHHh
Q 022546 229 DIVECT-FVQSSV-TELPFFASKVRLGKNGADEVLGLGPLSDYEKQGLESLKPELKASIEKGI 289 (295)
Q Consensus 229 ~v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~~~~ 289 (295)
.+++++ +++|+| .++++||+||++|++|+++++++ +|+++|+++|++|++.|++.++...
T Consensus 253 ~~~~~~~~~~g~~g~~~~~~~vP~~ig~~Gv~~i~~~-~l~~~e~~~l~~s~~~l~~~~~~~~ 314 (317)
T 3d0o_A 253 AVLTVSALLEGEYEEEDVYIGVPAVINRNGIRNVVEI-PLNDEEQSKFAHSAKTLKDIMAEAE 314 (317)
T ss_dssp EEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHHHC--
T ss_pred cEEEEEEeecCccCCCceEEEEEEEEeCCeeEEEecC-CCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 577887 789998 34999999999999999999997 9999999999999999999988654
No 24
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=100.00 E-value=4.9e-57 Score=410.05 Aligned_cols=271 Identities=26% Similarity=0.389 Sum_probs=243.5
Q ss_pred CCCCcCeEEEEeC--CC--chhHHHhhhCCCC-CCeEEEeeCCCchhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHH
Q 022546 3 LDPLVSSLSLYDI--AN--TPGVAADVSHINS-PAQVEGYAGEEQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGI 77 (295)
Q Consensus 3 ~~~~~~ei~L~D~--~~--~~~~~~Dl~~~~~-~~~v~~~~~t~d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i 77 (295)
+++..+||+|+|+ ++ +++.++||.|+.. ...++...+ + +++++|||+||++++.++++|++|.+++.+|+++
T Consensus 22 ~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~~--~-~~a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i 98 (303)
T 1o6z_A 22 LRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQG--G-YEDTAGSDVVVITAGIPRQPGQTRIDLAGDNAPI 98 (303)
T ss_dssp HTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEEC--C-GGGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHH
T ss_pred hCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEeC--C-HHHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHH
Confidence 4577899999999 65 5788999998632 223333332 4 6899999999999999999999999999999999
Q ss_pred HHHHHHHHHhhCCCeEEEEecCCccchHHHHHHHHHHhCCCCCCCeeec-chhhHHHHHHHHHhhcCCCCccceEEEeeC
Q 022546 78 VKSLCTAIANYCPHALVNMISNPVNSTVPIAAEVFKKAGTYDEKKLFGV-TTLDVVRAKTFYAGKVNVPVAEVNVPVIGG 156 (295)
Q Consensus 78 ~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~k~sg~~~~~kviG~-t~ld~~R~~~~la~~l~v~~~~v~~~viG~ 156 (295)
++++++.+++++|++|++++|||+|++|+++ +|.+| +|++||||+ |.||++|+++++|+++|++|++|+++||||
T Consensus 99 ~~~i~~~i~~~~p~~~viv~SNPv~~~~~~~---~~~~~-~p~~rviG~gt~Ld~~r~~~~la~~l~v~~~~v~~~v~G~ 174 (303)
T 1o6z_A 99 MEDIQSSLDEHNDDYISLTTSNPVDLLNRHL---YEAGD-RSREQVIGFGGRLDSARFRYVLSEEFDAPVQNVEGTILGE 174 (303)
T ss_dssp HHHHHHHHHTTCSCCEEEECCSSHHHHHHHH---HHHSS-SCGGGEEECCHHHHHHHHHHHHHHHHTCCGGGEECCEEEC
T ss_pred HHHHHHHHHHHCCCcEEEEeCChHHHHHHHH---HHHcC-CCHHHeeecccchhHHHHHHHHHHHhCcCHHHeEEEEEeC
Confidence 9999999999999999999999999999987 89998 999999999 999999999999999999999999999999
Q ss_pred CCCceeeeccccCcCCCC-CC-CHHHHHHHHHHhhchhhhhhhhccCCCcchhhHHHHHHHHHHHHHcCcCCCCceeEEE
Q 022546 157 HAGVTILPLFSQATPKSN-NL-SDEEIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAVFADACLMGLNGVPDIVECT 234 (295)
Q Consensus 157 hg~~~~vp~~s~~~v~~~-~~-~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~s~a~a~~~~i~ai~~~~~~~~~v~~~~ 234 (295)
||+ +++|+||++++++. .+ ++++++++.++++++++++++ +||+++||+|.++++++++|++|++ .+++++
T Consensus 175 HG~-~~~p~~s~~~v~g~p~~~~~~~~~~~~~~v~~~g~eii~---~kg~~~~~~a~a~~~~~~ai~~~~~---~~~~~~ 247 (303)
T 1o6z_A 175 HGD-AQVPVFSKVSVDGTDPEFSGDEKEQLLGDLQESAMDVIE---RKGATEWGPARGVAHMVEAILHDTG---EVLPAS 247 (303)
T ss_dssp SST-TEEECGGGCEETTBCCCCCHHHHHHHHHHHHHHHHHHHT---TTSSCCHHHHHHHHHHHHHHHTTCC---CEEEEE
T ss_pred CCC-ccccCCcccccCCcCccCCHHHHHHHHHHHHHHhHHHHh---cCCChHHHHHHHHHHHHHHHHhCCC---CEEEEE
Confidence 999 89999999987542 23 778899999999999999998 6689999999999999999999974 477876
Q ss_pred -EeeCCC-CCccEEEEeEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 022546 235 -FVQSSV-TELPFFASKVRLGKNGADEVLGLGPLSDYEKQGLESLKPELKASIEKG 288 (295)
Q Consensus 235 -~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~~~ 288 (295)
+++|+| .++++||+||++|++|+++++++ +|+++|+++|++|++.|++.+++.
T Consensus 248 ~~~~g~~g~~~~~~~~P~~ig~~Gv~~i~~~-~l~~~e~~~l~~s~~~l~~~~~~~ 302 (303)
T 1o6z_A 248 VKLEGEFGHEDTAFGVPVSLGSNGVEEIVEW-DLDDYEQDLMADAAEKLSDQYDKI 302 (303)
T ss_dssp EEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EecCCccCCcceEEEEEEEEeCCeeEEecCC-CCCHHHHHHHHHHHHHHHHHHHhh
Confidence 789998 57899999999999999999997 999999999999999999988753
No 25
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=100.00 E-value=1e-56 Score=408.94 Aligned_cols=272 Identities=27% Similarity=0.469 Sum_probs=237.3
Q ss_pred CCCCcCeEEEEeCCC--chhHHHhhhCCC----CCCeEEEeeCCCchhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHH
Q 022546 3 LDPLVSSLSLYDIAN--TPGVAADVSHIN----SPAQVEGYAGEEQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAG 76 (295)
Q Consensus 3 ~~~~~~ei~L~D~~~--~~~~~~Dl~~~~----~~~~v~~~~~t~d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~ 76 (295)
+.+.++ ++|+|+++ +++.++||.|+. ...+++. ++|+ ++++|||+||+++|.|+++|++|.+++.+|++
T Consensus 23 ~~g~~~-v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~---t~d~-~a~~~aD~Vi~a~g~p~~~g~~r~dl~~~n~~ 97 (309)
T 1ur5_A 23 AKELGD-IVLLDIVEGVPQGKALDLYEASPIEGFDVRVTG---TNNY-ADTANSDVIVVTSGAPRKPGMSREDLIKVNAD 97 (309)
T ss_dssp HTTCSE-EEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEE---ESCG-GGGTTCSEEEECCCC--------CHHHHHHHH
T ss_pred HCCCCe-EEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEE---CCCH-HHHCCCCEEEEcCCCCCCCCCCHHHHHHHHHH
Confidence 455555 99999987 788899999973 2334553 3465 89999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhCCCeEEEEecCCccchHHHHHHHHHHhCCCCCCCeeec-chhhHHHHHHHHHhhcCCCCccceEEEee
Q 022546 77 IVKSLCTAIANYCPHALVNMISNPVNSTVPIAAEVFKKAGTYDEKKLFGV-TTLDVVRAKTFYAGKVNVPVAEVNVPVIG 155 (295)
Q Consensus 77 i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~k~sg~~~~~kviG~-t~ld~~R~~~~la~~l~v~~~~v~~~viG 155 (295)
+++++++.|++++|++|++++|||+|++|+++ +|.+| +|++||||+ |.||++|+++++|+++|++|++|+++|||
T Consensus 98 i~~~i~~~i~~~~p~a~vi~~tNPv~~~t~~~---~~~~~-~~~~rviG~gt~LD~~r~~~~la~~lgv~~~~v~~~v~G 173 (309)
T 1ur5_A 98 ITRACISQAAPLSPNAVIIMVNNPLDAMTYLA---AEVSG-FPKERVIGQAGVLDAARYRTFIAMEAGVSVEDVQAMLMG 173 (309)
T ss_dssp HHHHHHHHHGGGCTTCEEEECCSSHHHHHHHH---HHHHC-CCGGGEEECCHHHHHHHHHHHHHHHHTCCGGGEEECCEE
T ss_pred HHHHHHHHHHhhCCCeEEEEcCCchHHHHHHH---HHHcC-CCHHHEEECCcchHHHHHHHHHHHHhCCChhheeEEEec
Confidence 99999999999999999999999999999987 78888 999999999 99999999999999999999999999999
Q ss_pred CCCCceeeeccccCcCCCC----CCCHHHHHHHHHHhhchhhhhhhhccCCCcchhhHHHHHHHHHHHHHcCcCCCCcee
Q 022546 156 GHAGVTILPLFSQATPKSN----NLSDEEIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAVFADACLMGLNGVPDIV 231 (295)
Q Consensus 156 ~hg~~~~vp~~s~~~v~~~----~~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~s~a~a~~~~i~ai~~~~~~~~~v~ 231 (295)
|||+ +++|+||++++++. .+++++++++.++++++++++++. .+||+++||+|.++++++++|++|++ .++
T Consensus 174 ~Hg~-t~~p~~s~~~v~g~~~~~~~~~~~~~~~~~~v~~~g~eii~~-~~kgs~~~~~a~a~~~~~~ai~~~~~---~~~ 248 (309)
T 1ur5_A 174 GHGD-EMVPLPRFSCISGIPVSEFIAPDRLAQIVERTRKGGGEIVNL-LKTGSAYYAPAAATAQMVEAVLKDKK---RVM 248 (309)
T ss_dssp CSGG-GEECCGGGEEETTEEGGGTSCHHHHHHHHHHHHTHHHHHHHH-HSSCCCCHHHHHHHHHHHHHHHTTCC---EEE
T ss_pred CcCC-ceeeeeecceeCCEeHHHHcCHhHHHHHHHHHHhhhHHhhhh-ccCCCcHHHHHHHHHHHHHHHHcCCC---cEE
Confidence 9998 99999999988653 257788999999999999999985 35689999999999999999999874 588
Q ss_pred EEE-EeeCCC-CCccEEEEeEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHHh
Q 022546 232 ECT-FVQSSV-TELPFFASKVRLGKNGADEVLGLGPLSDYEKQGLESLKPELKASIEKGI 289 (295)
Q Consensus 232 ~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~~~~ 289 (295)
+++ +++|+| .++++||+||++|++|+++++++ +|+++|+++|++|++.|++.+++..
T Consensus 249 ~~~~~~~g~~g~~~~~~~vP~~ig~~Gv~~i~~~-~l~~~e~~~l~~s~~~l~~~~~~~~ 307 (309)
T 1ur5_A 249 PVAAYLTGQYGLNDIYFGVPVILGAGGVEKILEL-PLNEEEMALLNASAKAVRATLDTLK 307 (309)
T ss_dssp EEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred EEEEEecCccCCcceEEEEEEEEeCCceEEecCC-CCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 886 889998 57999999999999999999997 9999999999999999999988653
No 26
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=100.00 E-value=6e-57 Score=411.73 Aligned_cols=271 Identities=24% Similarity=0.348 Sum_probs=242.7
Q ss_pred CCCCcCeEEEEeCCC--chhHHHhhhCCCC--CCeEEEeeCCCchhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHH
Q 022546 3 LDPLVSSLSLYDIAN--TPGVAADVSHINS--PAQVEGYAGEEQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIV 78 (295)
Q Consensus 3 ~~~~~~ei~L~D~~~--~~~~~~Dl~~~~~--~~~v~~~~~t~d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~ 78 (295)
+.++++||+|+|+++ +++.++|+.|... ...++.+. ++ +++++|||+||++++.++++|++|.+++.+|++++
T Consensus 27 ~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~--~~-~~al~~aDvViia~~~~~~~g~~r~dl~~~n~~i~ 103 (316)
T 1ldn_A 27 NQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH--GD-YDDCRDADLVVICAGANQKPGETRLDLVDKNIAIF 103 (316)
T ss_dssp HHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE--CC-GGGTTTCSEEEECCSCCCCTTTCSGGGHHHHHHHH
T ss_pred hCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEc--Cc-HHHhCCCCEEEEcCCCCCCCCCCHHHHHHcChHHH
Confidence 457789999999987 6788999998642 11344433 23 68999999999999999999999999999999999
Q ss_pred HHHHHHHHhhCCCeEEEEecCCccchHHHHHHHHHHhCCCCCCCeeec-chhhHHHHHHHHHhhcCCCCccceEEEeeCC
Q 022546 79 KSLCTAIANYCPHALVNMISNPVNSTVPIAAEVFKKAGTYDEKKLFGV-TTLDVVRAKTFYAGKVNVPVAEVNVPVIGGH 157 (295)
Q Consensus 79 ~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~k~sg~~~~~kviG~-t~ld~~R~~~~la~~l~v~~~~v~~~viG~h 157 (295)
+++++.+++++|++|++++|||+|++|+++ +|++| +|++||||+ |.||++|+++++|+++|++|++|+++|||||
T Consensus 104 ~~i~~~i~~~~p~a~~iv~tNPv~~~~~~~---~~~s~-~p~~rviG~gt~lD~~r~~~~la~~l~v~~~~v~~~v~G~H 179 (316)
T 1ldn_A 104 RSIVESVMASGFQGLFLVATNPVDILTYAT---WKFSG-LPHERVIGSGTILDTARFRFLLGEYFSVAPQNVHAYIIGEH 179 (316)
T ss_dssp HHHHHHHHHHTCCSEEEECSSSHHHHHHHH---HHHHT-CCGGGEEECTTHHHHHHHHHHHHHHHTSCGGGEEEEEEBCS
T ss_pred HHHHHHHHHHCCCCEEEEeCCchHHHHHHH---HHHhC-CCHHHEEecccchHHHHHHHHHHHHhCCCHHHeEEEEeccc
Confidence 999999999999999999999999999987 78998 999999999 9999999999999999999999999999999
Q ss_pred CCceeeeccccCcCCCCC----------CCHHHHHHHHHHhhchhhhhhhhccCCCcchhhHHHHHHHHHHHHHcCcCCC
Q 022546 158 AGVTILPLFSQATPKSNN----------LSDEEIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAVFADACLMGLNGV 227 (295)
Q Consensus 158 g~~~~vp~~s~~~v~~~~----------~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~s~a~a~~~~i~ai~~~~~~~ 227 (295)
|+ +++|+||++++++.+ +++++++++.++++++++++++ +||+++|++|.++++++++|++|++
T Consensus 180 G~-~~~p~~s~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~eii~---~kg~~~~~~a~a~~~~~~ai~~~~~-- 253 (316)
T 1ldn_A 180 GD-TELPVWSQAYIGVMPIRKLVESKGEEAQKDLERIFVNVRDAAYQIIE---KKGATYYGIAMGLARVTRAILHNEN-- 253 (316)
T ss_dssp ST-TCEEEEEEEEETTEESTTTSGGGTTTHHHHHHHHHHHHHHHHHHHHH---HHSCCCHHHHHHHHHHHHHHHTTCC--
T ss_pred CC-ceeeeehhccCCCEEHHHHhhccccCCHHHHHHHHHHHHHhHHHHHh---ccCCcHHHHHHHHHHHHHHHHhCCC--
Confidence 99 899999999876421 3345678999999999999999 4588999999999999999999864
Q ss_pred CceeEEE-EeeCCC-CCccEEEEeEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 022546 228 PDIVECT-FVQSSV-TELPFFASKVRLGKNGADEVLGLGPLSDYEKQGLESLKPELKASIEKG 288 (295)
Q Consensus 228 ~~v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~~~ 288 (295)
.+++++ +++|+| .++++||+||++|++|+++++++ +|+++|+++|++|++.|++.+++.
T Consensus 254 -~~~~~~~~~~g~yg~~~~~~~vP~~ig~~Gv~~i~~~-~l~~~e~~~l~~s~~~l~~~~~~~ 314 (316)
T 1ldn_A 254 -AILTVSAYLDGLYGERDVYIGVPAVINRNGIREVIEI-ELNDDEKNRFHHSAATLKSVLARA 314 (316)
T ss_dssp -EEEEEEEEEESTTSCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHHHHS
T ss_pred -cEEEEEEEecCccCCcceEEEEEEEEeCCeeEEEccC-CCCHHHHHHHHHHHHHHHHHHHHH
Confidence 577876 889998 57999999999999999999997 999999999999999999998865
No 27
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=100.00 E-value=8.8e-56 Score=401.05 Aligned_cols=261 Identities=20% Similarity=0.276 Sum_probs=226.9
Q ss_pred CCCCcCeEEEEeCCC-chhHHHhhhCCCCCCeEEEeeCCCchhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHH
Q 022546 3 LDPLVSSLSLYDIAN-TPGVAADVSHINSPAQVEGYAGEEQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSL 81 (295)
Q Consensus 3 ~~~~~~ei~L~D~~~-~~~~~~Dl~~~~~~~~v~~~~~t~d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~i 81 (295)
..++++||+|+|+++ +.|.++|+.|+.. ++++.+ +|+ ++++|||+||+++|.+ +|||+|++++.+|+++++++
T Consensus 35 ~~g~~~ev~L~Di~~~~~g~a~dl~~~~~-~~i~~t---~d~-~~l~~aD~Vi~aag~~-~pG~tR~dl~~~n~~i~~~i 108 (303)
T 2i6t_A 35 AKGIADRLVLLDLSEGTKGATMDLEIFNL-PNVEIS---KDL-SASAHSKVVIFTVNSL-GSSQSYLDVVQSNVDMFRAL 108 (303)
T ss_dssp HHTCCSEEEEECCC-----CHHHHHHHTC-TTEEEE---SCG-GGGTTCSEEEECCCC-----CCHHHHHHHHHHHHHHH
T ss_pred hcCCCCEEEEEcCCcchHHHHHHHhhhcC-CCeEEe---CCH-HHHCCCCEEEEcCCCC-CCCCCHHHHHHHHHHHHHHH
Confidence 346789999999987 8899999998654 366653 465 8999999999999996 89999999999999999999
Q ss_pred HHHHHhhCCCeEEEEecCCccchHHHHHHHHHHhCCCCCCCeeec-chhhHHHHHHHHHhhcCCCCccceEEEeeCCCCc
Q 022546 82 CTAIANYCPHALVNMISNPVNSTVPIAAEVFKKAGTYDEKKLFGV-TTLDVVRAKTFYAGKVNVPVAEVNVPVIGGHAGV 160 (295)
Q Consensus 82 ~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~k~sg~~~~~kviG~-t~ld~~R~~~~la~~l~v~~~~v~~~viG~hg~~ 160 (295)
++.|+++||++|++++|||+|++|+++ +|.+| ||++||||+ |.||++|+++++|+++|++|++|+++|||+||+
T Consensus 109 ~~~i~~~~p~a~iiv~sNP~~~~t~~~---~~~~~-~p~~rviG~gt~Ld~~R~~~~la~~lgv~~~~v~~~v~G~Hg~- 183 (303)
T 2i6t_A 109 VPALGHYSQHSVLLVASQPVEIMTYVT---WKLST-FPANRVIGIGCNLDSQRLQYIITNVLKAQTSGKEVWVIGEQGE- 183 (303)
T ss_dssp HHHHHHHTTTCEEEECSSSHHHHHHHH---HHHHC-CCGGGEEECTTHHHHHHHHHHHHHTSCCTTGGGGEEEEBSCSS-
T ss_pred HHHHHHhCCCeEEEEcCChHHHHHHHH---HHhcC-CCHHHeeCCCCCchHHHHHHHHHHHcCCChHHeEEEEecCCCC-
Confidence 999999999999999999999999987 78888 999999999 999999999999999999999999999999998
Q ss_pred eeeeccccCcCCCCCCCHHHHHHHHHHhhchhhhhhhhccCCCcchhhHHHHHHHHHHHHHcCcCCCCceeEEE-EeeCC
Q 022546 161 TILPLFSQATPKSNNLSDEEIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAVFADACLMGLNGVPDIVECT-FVQSS 239 (295)
Q Consensus 161 ~~vp~~s~~~v~~~~~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~s~a~a~~~~i~ai~~~~~~~~~v~~~~-~~~g~ 239 (295)
+++|+||+.. ..+. +++.++++++++++++ +||+++||+|.++++++++|++|++ .+++++ +++|+
T Consensus 184 s~~p~~s~~~---~~~~----~~~~~~~~~~g~eii~---~kGst~~~~a~a~~~i~~ai~~~~~---~~~~vs~~~~g~ 250 (303)
T 2i6t_A 184 DKVLTWSGQE---EVVS----HTSQVQLSNRAMELLR---VKGQRSWSVGLSVADMVDSIVNNKK---KVHSVSALAKGY 250 (303)
T ss_dssp SCEEEEBCSS---CCCC----HHHHHHHHHHHHTTSS---SCCCCHHHHHHHHHHHHHHHHTTCC---EEEEEEEECTTS
T ss_pred Cccccccccc---cccH----HHHHHHHHHHHHHHHH---ccCchHHhHHHHHHHHHHHHHcCCC---cEEEEEEEeCCc
Confidence 8999999852 1222 4577778889999988 6789999999999999999999975 577776 78999
Q ss_pred C--CCccEEEEeEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 022546 240 V--TELPFFASKVRLGKNGADEVLGLGPLSDYEKQGLESLKPELKASIEK 287 (295)
Q Consensus 240 ~--~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~~ 287 (295)
| ++++|||+||++|++|+++++++++|+++|+++|++|++.|++.++.
T Consensus 251 yg~~~~~~~~vP~~ig~~Gv~~i~~~~~l~~~e~~~l~~s~~~l~~~~~~ 300 (303)
T 2i6t_A 251 YDINSEVFLSLPCILGTNGVSEVIKTTLKEDTVTEKLQSSASSIHSLQQQ 300 (303)
T ss_dssp TTCCSCCEEEEEEEEETTEEEEECCBCC-CCHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCeEEEEEEEEECCccEEecCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 8 57999999999999999999987689999999999999999998875
No 28
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=100.00 E-value=5.6e-56 Score=404.89 Aligned_cols=275 Identities=24% Similarity=0.378 Sum_probs=238.7
Q ss_pred CCCCCcCeEEEEeC--CC--chhHHHhhhCCCC-C-CeEEEeeCCCchhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHH
Q 022546 2 KLDPLVSSLSLYDI--AN--TPGVAADVSHINS-P-AQVEGYAGEEQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINA 75 (295)
Q Consensus 2 ~~~~~~~ei~L~D~--~~--~~~~~~Dl~~~~~-~-~~v~~~~~t~d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~ 75 (295)
+.++.++||+|+|+ ++ +.+.++||+|+.. . ..++...++++++++++|||+||+++|.++++|++|.+++.+|+
T Consensus 21 ~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~l~~al~gaD~Vi~~Ag~~~~~g~~r~dl~~~N~ 100 (313)
T 1hye_A 21 AKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRIIDESDVVIITSGVPRKEGMSRMDLAKTNA 100 (313)
T ss_dssp HTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGGGTTCSEEEECCSCCCCTTCCHHHHHHHHH
T ss_pred HhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCCcchHHHhCCCCEEEECCCCCCCCCCcHHHHHHHHH
Confidence 35678899999999 65 6788999998641 1 23333322223679999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhCCCeEEEEecCCccchHHHHHHHHHHhCCCCCCCeeec-chhhHHHHHHHHHhhcCCCCccceEEEe
Q 022546 76 GIVKSLCTAIANYCPHALVNMISNPVNSTVPIAAEVFKKAGTYDEKKLFGV-TTLDVVRAKTFYAGKVNVPVAEVNVPVI 154 (295)
Q Consensus 76 ~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~k~sg~~~~~kviG~-t~ld~~R~~~~la~~l~v~~~~v~~~vi 154 (295)
++++++++.+++++ ++|++++|||+|++|+++ +|.+| +|++||||+ |.||++|+++++|+++|++|++|+++||
T Consensus 101 ~i~~~i~~~i~~~~-~~~vlv~SNPv~~~t~~~---~k~~~-~p~~rviG~gt~LD~~r~~~~la~~lgv~~~~v~~~v~ 175 (313)
T 1hye_A 101 KIVGKYAKKIAEIC-DTKIFVITNPVDVMTYKA---LVDSK-FERNQVFGLGTHLDSLRFKVAIAKFFGVHIDEVRTRII 175 (313)
T ss_dssp HHHHHHHHHHHHHC-CCEEEECSSSHHHHHHHH---HHHHC-CCTTSEEECTTHHHHHHHHHHHHHHHTCCGGGEECCEE
T ss_pred HHHHHHHHHHHHhC-CeEEEEecCcHHHHHHHH---HHhhC-cChhcEEEeCccHHHHHHHHHHHHHhCcCHHHeEEEEe
Confidence 99999999999999 999999999999999987 78888 999999999 9999999999999999999999999999
Q ss_pred eCCCCceeeeccccCcCCCCC------CCHHHHHHHHHHhhchhhhhhhhccCCCcchhhHHHHHHHHHHHHHcCcCCCC
Q 022546 155 GGHAGVTILPLFSQATPKSNN------LSDEEIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAVFADACLMGLNGVP 228 (295)
Q Consensus 155 G~hg~~~~vp~~s~~~v~~~~------~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~s~a~a~~~~i~ai~~~~~~~~ 228 (295)
||||+ +++|+||++++++.+ +++++++++.++++++++++++ +||+++||+|.++++++++|++|++
T Consensus 176 G~Hg~-~~~p~~s~~~v~g~~~~~~~~~~~~~~~~~~~~v~~~g~eii~---~kgs~~~~~a~a~~~~~~ai~~~~~--- 248 (313)
T 1hye_A 176 GEHGD-SMVPLLSATSIGGIPIQKFERFKELPIDEIIEDVKTKGEQIIR---LKGGSEFGPAAAILNVVRCIVNNEK--- 248 (313)
T ss_dssp ECSST-TEEECGGGCEETTEEGGGCGGGGGCCHHHHHHHHHHHTTSCCC---------CCHHHHHHHHHHHHHTTCC---
T ss_pred eccCC-cccceeeccccCCEEHHHHhcCCHHHHHHHHHHHHhccceeec---CCCCcHHHHHHHHHHHHHHHHcCCC---
Confidence 99998 999999999886532 2555689999999999999998 5689999999999999999999964
Q ss_pred ceeEEE-EeeCCC--CCccEEEEeEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHHh
Q 022546 229 DIVECT-FVQSSV--TELPFFASKVRLGKNGADEVLGLGPLSDYEKQGLESLKPELKASIEKGI 289 (295)
Q Consensus 229 ~v~~~~-~~~g~~--~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~~~~ 289 (295)
.+++++ +++|+| .++++||+||++|++|+++++++ +|+++|+++|++|++.|++.+++..
T Consensus 249 ~~~~~~~~~~g~~~g~~~~~~~~P~~ig~~Gv~~i~~~-~l~~~e~~~l~~s~~~l~~~~~~~~ 311 (313)
T 1hye_A 249 RLLTLSAYVDGEFDGIRDVCIGVPVKIGRDGIEEVVSI-ELDKDEIIAFRKSAEIIKKYCEEVK 311 (313)
T ss_dssp EEEEEEEEEESSSSSCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred eEEEEEEeecceecCccceEEEEEEEEeCCeeEEecCC-CCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 577776 789988 35999999999999999999997 9999999999999999999988754
No 29
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=100.00 E-value=1.7e-54 Score=396.24 Aligned_cols=270 Identities=30% Similarity=0.462 Sum_probs=242.0
Q ss_pred CCCCcCeEEEEeCCC--chhHHHhhhCCC----CCCeEEEeeCCCchhhhcCCCcEEEEcCCCCCCCCCC-----HHHHH
Q 022546 3 LDPLVSSLSLYDIAN--TPGVAADVSHIN----SPAQVEGYAGEEQLGKALEGSDVVIIPAGVPRKPGMT-----RDDLF 71 (295)
Q Consensus 3 ~~~~~~ei~L~D~~~--~~~~~~Dl~~~~----~~~~v~~~~~t~d~~~al~daDiVvi~~g~~~~~g~~-----r~~~~ 71 (295)
..++++ |+|+|+++ +++.++|+++.. ...+++. ++|+ ++++|||+||+++|.|+++|++ |.+++
T Consensus 25 ~~g~~~-v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~---t~d~-~al~~aD~Vi~a~g~p~k~g~~~qe~~r~dl~ 99 (322)
T 1t2d_A 25 QKNLGD-VVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSG---SNTY-DDLAGADVVIVTAGFTKAPGKSDKEWNRDDLL 99 (322)
T ss_dssp HTTCCE-EEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEE---ECCG-GGGTTCSEEEECCSCSSCTTCCSTTCCGGGGH
T ss_pred hCCCCe-EEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEE---CCCH-HHhCCCCEEEEeCCCCCCCCCCcccccHHHHH
Confidence 345655 99999987 788899999862 2345554 3566 8999999999999999999999 99999
Q ss_pred HHHHHHHHHHHHHHHhhCCCeEEEEecCCccchHHHHHHHHHHhCCCCCCCeeec-chhhHHHHHHHHHhhcCCCCccce
Q 022546 72 NINAGIVKSLCTAIANYCPHALVNMISNPVNSTVPIAAEVFKKAGTYDEKKLFGV-TTLDVVRAKTFYAGKVNVPVAEVN 150 (295)
Q Consensus 72 ~~n~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~k~sg~~~~~kviG~-t~ld~~R~~~~la~~l~v~~~~v~ 150 (295)
.+|+++++++++.|.+++|++|+|++|||+|++|+++ ++.+| ||++||||+ |.||++|+++++|+++|++|++|+
T Consensus 100 ~~n~~i~~~i~~~i~~~~p~a~iiv~tNP~~~~t~~~---~~~~g-~~~~rviG~gt~ld~~R~~~~la~~lgv~~~~v~ 175 (322)
T 1t2d_A 100 PLNNKIMIEIGGHIKKNCPNAFIIVVTNPVDVMVQLL---HQHSG-VPKNKIIGLGGVLDTSRLKYYISQKLNVCPRDVN 175 (322)
T ss_dssp HHHHHHHHHHHHHHHHHCTTSEEEECSSSHHHHHHHH---HHHHC-CCGGGEEECCHHHHHHHHHHHHHHHHTSCGGGEE
T ss_pred HHHHHHHHHHHHHHHHHCCCeEEEEecCChHHHHHHH---HHhcC-CChHHEEeccCcccHHHHHHHHHHHhCCCHHHeE
Confidence 9999999999999999999999999999999999886 78888 999999999 799999999999999999999999
Q ss_pred EEEeeCCCCceeeeccccCcCCCC---------CCCHHHHHHHHHHhhchhhhhhhhccCCCcchhhHHHHHHHHHHHHH
Q 022546 151 VPVIGGHAGVTILPLFSQATPKSN---------NLSDEEIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAVFADACL 221 (295)
Q Consensus 151 ~~viG~hg~~~~vp~~s~~~v~~~---------~~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~s~a~a~~~~i~ai~ 221 (295)
++||||||+ +++|+||++++++. .+++++++++.++++++++++++. ||+++||+|.++++++++|+
T Consensus 176 ~~v~G~HG~-~~~p~~s~~~v~g~~~~~~~~~~~~~~~~~~~~~~~v~~~g~eii~~---kgs~~~~~a~a~~~~~~ai~ 251 (322)
T 1t2d_A 176 AHIVGAHGN-KMVLLKRYITVGGIPLQEFINNKLISDAELEAIFDRTVNTALEIVNL---HASPYVAPAAAIIEMAESYL 251 (322)
T ss_dssp CCEEBCSST-TCEECGGGCEETTEEHHHHHHTTSSCHHHHHHHHHHHHTHHHHHHHH---TSSCCHHHHHHHHHHHHHHH
T ss_pred EEEEcCCCC-cEEeeHHHceECcEeHHHhccccCCCHHHHHHHHHHHHHHHHHHHhc---cCchHHHHHHHHHHHHHHHH
Confidence 999999998 89999999988642 246677899999999999999995 57899999999999999999
Q ss_pred cCcCCCCceeEEE-EeeCCC-CCccEEEEeEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHHh
Q 022546 222 MGLNGVPDIVECT-FVQSSV-TELPFFASKVRLGKNGADEVLGLGPLSDYEKQGLESLKPELKASIEKGI 289 (295)
Q Consensus 222 ~~~~~~~~v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~~~~ 289 (295)
+|++ .+++++ +++|+| .++++||+||++|++|+++++++ +|+++|+++|++|++.|++.++.+-
T Consensus 252 ~~~~---~v~~~s~~~~g~~g~~~~~~~vP~~ig~~Gv~~i~~~-~l~~~e~~~l~~s~~~L~~~~~~~~ 317 (322)
T 1t2d_A 252 KDLK---KVLICSTLLEGQYGHSDIFGGTPVVLGANGVEQVIEL-QLNSEEKAKFDEAIAETKRMKALAH 317 (322)
T ss_dssp TTCC---EEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHHHHC-
T ss_pred hCCC---CEEEEEEEecCccCCCceEEEEEEEEeCCeeEEeCCC-CCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 9874 588876 889998 57999999999999999999997 9999999999999999999988764
No 30
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=100.00 E-value=6e-54 Score=393.62 Aligned_cols=272 Identities=33% Similarity=0.506 Sum_probs=243.0
Q ss_pred CCCCcCeEEEEeCCC--chhHHHhhhCCC----CCCeEEEeeCCCchhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHH
Q 022546 3 LDPLVSSLSLYDIAN--TPGVAADVSHIN----SPAQVEGYAGEEQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAG 76 (295)
Q Consensus 3 ~~~~~~ei~L~D~~~--~~~~~~Dl~~~~----~~~~v~~~~~t~d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~ 76 (295)
..+.+ +++|+|+++ +++.++|+.|.. .+.+++. |+|+ ++++|||+||+++|.|+++|++|.+++.+|++
T Consensus 35 ~~g~~-~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~---t~d~-~al~~aD~VI~avg~p~k~g~tr~dl~~~n~~ 109 (328)
T 2hjr_A 35 QKDLG-DVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFG---ENNY-EYLQNSDVVIITAGVPRKPNMTRSDLLTVNAK 109 (328)
T ss_dssp HTTCC-EEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEE---ESCG-GGGTTCSEEEECCSCCCCTTCCSGGGHHHHHH
T ss_pred hCCCC-eEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEE---CCCH-HHHCCCCEEEEcCCCCCCCCCchhhHHhhhHH
Confidence 34554 499999988 678788998863 2335554 3566 89999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhCCCeEEEEecCCccchHHHHHHHHHHhCCCCCCCeeec-chhhHHHHHHHHHhhcCCCCccceEEEee
Q 022546 77 IVKSLCTAIANYCPHALVNMISNPVNSTVPIAAEVFKKAGTYDEKKLFGV-TTLDVVRAKTFYAGKVNVPVAEVNVPVIG 155 (295)
Q Consensus 77 i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~k~sg~~~~~kviG~-t~ld~~R~~~~la~~l~v~~~~v~~~viG 155 (295)
+++++++.|.+++|++|++++|||+|++|+++ ++.+| ||++||||+ |.||++|+++++|+++|++|++|+++|||
T Consensus 110 i~~~i~~~i~~~~p~a~viv~tNP~~~~t~~~---~~~~~-~~~~rviG~~t~Ld~~R~~~~la~~lgv~~~~v~~~v~G 185 (328)
T 2hjr_A 110 IVGSVAENVGKYCPNAFVICITNPLDAMVYYF---KEKSG-IPANKVCGMSGVLDSARFRCNLSRALGVKPSDVSAIVVG 185 (328)
T ss_dssp HHHHHHHHHHHHCTTCEEEECCSSHHHHHHHH---HHHHC-CCGGGEEESCHHHHHHHHHHHHHHHHTSCGGGEECCEEB
T ss_pred HHHHHHHHHHHHCCCeEEEEecCchHHHHHHH---HHhcC-CChhhEEEeCcHHHHHHHHHHHHHHhCCCHHHeeEEEec
Confidence 99999999999999999999999999999887 78888 999999999 59999999999999999999999999999
Q ss_pred CCCCceeeeccccCcCCCCC---------CCHHHHHHHHHHhhchhhhhhhhccCCCcchhhHHHHHHHHHHHHHcCcCC
Q 022546 156 GHAGVTILPLFSQATPKSNN---------LSDEEIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAVFADACLMGLNG 226 (295)
Q Consensus 156 ~hg~~~~vp~~s~~~v~~~~---------~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~s~a~a~~~~i~ai~~~~~~ 226 (295)
+||+ +++|+||++++++.+ +++++++++.++++++|+++++.+ ++|+++||+|.++++++++|++|++
T Consensus 186 ~Hg~-t~~p~~s~~~v~G~~~~~~~~~~~~~~~~~~~~~~~v~~~g~eii~~~-~~gs~~~~~a~a~~~i~~ai~~~~~- 262 (328)
T 2hjr_A 186 GHGD-EMIPLTSSVTIGGILLSDFVEQGKITHSQINEIIKKTAFGGGEIVELL-KTGSAFYAPAASAVAMAQAYLKDSK- 262 (328)
T ss_dssp CSST-TCEECGGGCEETTEEHHHHHHTTSSCHHHHHHHHHHHHTHHHHHHHHH-SSCCCCHHHHHHHHHHHHHHHTTCC-
T ss_pred CCCC-ceeeeeeeceECCEEHHHHhhccCCCHHHHHHHHHHHHhhHHHHHhhh-CCCchHHHHHHHHHHHHHHHHcCCC-
Confidence 9998 999999999886521 466678899999999999999964 6789999999999999999999865
Q ss_pred CCceeEEE-EeeCCC-CCccEEEEeEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHHh
Q 022546 227 VPDIVECT-FVQSSV-TELPFFASKVRLGKNGADEVLGLGPLSDYEKQGLESLKPELKASIEKGI 289 (295)
Q Consensus 227 ~~~v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~~~~ 289 (295)
.+++++ +++|+| .++++||+||++|++|+++++++ +|+++|+++|++|+..|++.++++.
T Consensus 263 --~v~~~~v~~~G~~g~~~~~~~vP~~ig~~Gv~~i~~~-~L~~~e~~~l~~s~~~l~~~~~~~~ 324 (328)
T 2hjr_A 263 --SVLVCSTYLTGQYNVNNLFVGVPVVIGKNGIEDVVIV-NLSDDEKSLFSKSVESIQNLVQDLK 324 (328)
T ss_dssp --EEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --cEEEEEEeecCccCCCceEEEEEEEEeCCeeEEecCC-CCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 588886 789998 57999999999999999999997 9999999999999999999998775
No 31
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=100.00 E-value=4.5e-53 Score=385.25 Aligned_cols=273 Identities=28% Similarity=0.482 Sum_probs=243.5
Q ss_pred CCCcCeEEEEeCCC--chhHHHhhhCCC----CCCeEEEeeCCCchhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHH
Q 022546 4 DPLVSSLSLYDIAN--TPGVAADVSHIN----SPAQVEGYAGEEQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGI 77 (295)
Q Consensus 4 ~~~~~ei~L~D~~~--~~~~~~Dl~~~~----~~~~v~~~~~t~d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i 77 (295)
++...+++|+|+++ +++..+|+.|.. ...+++. ++|+ +++++||+||++.+.|+++|++|.+++.+|+++
T Consensus 22 ~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~---t~d~-~~l~~aDvViiav~~p~~~g~~r~dl~~~n~~i 97 (310)
T 1guz_A 22 KQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTG---SNDY-ADTANSDIVIITAGLPRKPGMTREDLLMKNAGI 97 (310)
T ss_dssp TTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEE---ESCG-GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHH
T ss_pred CCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEE---CCCH-HHHCCCCEEEEeCCCCCCCCCCHHHHHHHHHHH
Confidence 34578999999987 678888998862 2334553 2465 559999999999999999999999999999999
Q ss_pred HHHHHHHHHhhCCCeEEEEecCCccchHHHHHHHHHHhCCCCCCCeeec-chhhHHHHHHHHHhhcCCCCccceEEEeeC
Q 022546 78 VKSLCTAIANYCPHALVNMISNPVNSTVPIAAEVFKKAGTYDEKKLFGV-TTLDVVRAKTFYAGKVNVPVAEVNVPVIGG 156 (295)
Q Consensus 78 ~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~k~sg~~~~~kviG~-t~ld~~R~~~~la~~l~v~~~~v~~~viG~ 156 (295)
++++++.|++++|+++++++|||+|++++++ +|.+| +|++||||+ |.||++|+++++|+++|+++++|+++|||+
T Consensus 98 ~~~i~~~i~~~~~~~~viv~tNP~~~~~~~~---~~~~~-~~~~rviG~gt~ld~~r~~~~la~~l~v~~~~v~~~v~G~ 173 (310)
T 1guz_A 98 VKEVTDNIMKHSKNPIIIVVSNPLDIMTHVA---WVRSG-LPKERVIGMAGVLDAARFRSFIAMELGVSMQDINACVLGG 173 (310)
T ss_dssp HHHHHHHHHHHCSSCEEEECCSSHHHHHHHH---HHHHC-SCGGGEEEECHHHHHHHHHHHHHHHHTCCGGGEECCEEEC
T ss_pred HHHHHHHHHHhCCCcEEEEEcCchHHHHHHH---HHhcC-CChHHEEECCCchHHHHHHHHHHHHhCCCHHHeEEEEEcc
Confidence 9999999999999999999999999999886 78888 999999999 999999999999999999999999999999
Q ss_pred CCCceeeeccccCcCCCCC----CCHHHHHHHHHHhhchhhhhhhhccCCCcchhhHHHHHHHHHHHHHcCcCCCCceeE
Q 022546 157 HAGVTILPLFSQATPKSNN----LSDEEIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAVFADACLMGLNGVPDIVE 232 (295)
Q Consensus 157 hg~~~~vp~~s~~~v~~~~----~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~s~a~a~~~~i~ai~~~~~~~~~v~~ 232 (295)
||+ +++|+||++++++.+ +++++++++.++++++++++++. .+||+++||+|.++++++++|++|++ .+++
T Consensus 174 Hg~-~~~p~~s~~~v~g~~~~~~~~~~~~~~~~~~v~~~g~~ii~~-~~kgs~~~~~a~a~~~~~~ai~~~~~---~~~~ 248 (310)
T 1guz_A 174 HGD-AMVPVVKYTTVAGIPISDLLPAETIDKLVERTRNGGAEIVEH-LKQGSAFYAPASSVVEMVESIVLDRK---RVLP 248 (310)
T ss_dssp SGG-GEEECGGGCEETTEEHHHHSCHHHHHHHHHHHHTHHHHHHHH-HSSSCCCHHHHHHHHHHHHHHHTTCC---EEEE
T ss_pred cCC-cEeeeeecccCCCEEHHHHCCHHHHHHHHHHHHHhHHHHHhh-cCCCCcHHHHHHHHHHHHHHHHcCCC---cEEE
Confidence 997 999999999987643 46778899999999999999985 35689999999999999999999974 5888
Q ss_pred EE-EeeCCC-CCccEEEEeEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHHhh
Q 022546 233 CT-FVQSSV-TELPFFASKVRLGKNGADEVLGLGPLSDYEKQGLESLKPELKASIEKGIQ 290 (295)
Q Consensus 233 ~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~~~~~ 290 (295)
++ +++|+| .++++||+||++|++|+++++++ +|+++|+++|++|++.|++.+++...
T Consensus 249 ~~~~~~g~~g~~~~~~~~P~~ig~~Gv~~i~~~-~l~~~e~~~l~~s~~~l~~~~~~~~~ 307 (310)
T 1guz_A 249 CAVGLEGQYGIDKTFVGVPVKLGRNGVEQIYEI-NLDQADLDLLQKSAKIVDENCKMLES 307 (310)
T ss_dssp EEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHHHTC--
T ss_pred EEEeecCccCCcceEEEEEEEEeCCeeEEEcCC-CCCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 76 889998 57999999999999999999997 99999999999999999999987654
No 32
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=100.00 E-value=2e-53 Score=390.53 Aligned_cols=273 Identities=25% Similarity=0.470 Sum_probs=242.5
Q ss_pred CCCcCeEEEEeCCC--chhHHHhhhCCC----CCCeEEEeeCCCchhhhcCCCcEEEEcCCCCCCCCC-----CHHHHHH
Q 022546 4 DPLVSSLSLYDIAN--TPGVAADVSHIN----SPAQVEGYAGEEQLGKALEGSDVVIIPAGVPRKPGM-----TRDDLFN 72 (295)
Q Consensus 4 ~~~~~ei~L~D~~~--~~~~~~Dl~~~~----~~~~v~~~~~t~d~~~al~daDiVvi~~g~~~~~g~-----~r~~~~~ 72 (295)
.+.+ +++|+|+++ +++.++|+.|.. .+.+++. |+|+.++++|||+||+++|.|+++|+ +|.+++.
T Consensus 31 ~g~~-~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~---t~d~~ea~~~aDiVi~a~g~p~~~g~~~~~~~r~dl~~ 106 (331)
T 1pzg_A 31 RELA-DVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA---EYSYEAALTGADCVIVTAGLTKVPGKPDSEWSRNDLLP 106 (331)
T ss_dssp HTCC-EEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE---ECSHHHHHTTCSEEEECCSCSSCTTCCGGGCCGGGGHH
T ss_pred CCCC-eEEEEECChhHHHHHHHHHHhhhhccCCCCEEEE---eCCHHHHhCCCCEEEEccCCCCCCCcccCCCCHHHHHH
Confidence 3444 499999988 677788888752 2335554 35776799999999999999999999 9999999
Q ss_pred HHHHHHHHHHHHHHhhCCCeEEEEecCCccchHHHHHHHHHHhCCCCCCCeeec-chhhHHHHHHHHHhhcCCCCccceE
Q 022546 73 INAGIVKSLCTAIANYCPHALVNMISNPVNSTVPIAAEVFKKAGTYDEKKLFGV-TTLDVVRAKTFYAGKVNVPVAEVNV 151 (295)
Q Consensus 73 ~n~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~k~sg~~~~~kviG~-t~ld~~R~~~~la~~l~v~~~~v~~ 151 (295)
+|+++++++++.|.+++|++|++++|||+|++|+++ ++.+| ||++||||+ |.||++|+++++|+++|++|++|++
T Consensus 107 ~n~~i~~~i~~~i~~~~p~a~vi~~tNP~~~~t~~~---~~~~~-~~~~rviG~gt~LD~~R~~~~la~~lgv~~~~v~~ 182 (331)
T 1pzg_A 107 FNSKIIREIGQNIKKYCPKTFIIVVTNPLDCMVKVM---CEASG-VPTNMICGMACMLDSGRFRRYVADALSVSPRDVQA 182 (331)
T ss_dssp HHHHHHHHHHHHHHHHCTTCEEEECCSSHHHHHHHH---HHHHC-CCGGGEEECCHHHHHHHHHHHHHHHHTSCGGGEEC
T ss_pred HHHHHHHHHHHHHHHHCCCcEEEEEcCchHHHHHHH---HHhcC-CChhcEEeccchHHHHHHHHHHHHHhCCCHHHceE
Confidence 999999999999999999999999999999999886 78888 999999999 7999999999999999999999999
Q ss_pred EEeeCCCCceeeeccccCcCCCCC---------CCHHHHHHHHHHhhchhhhhhhhccCCCcchhhHHHHHHHHHHHHHc
Q 022546 152 PVIGGHAGVTILPLFSQATPKSNN---------LSDEEIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAVFADACLM 222 (295)
Q Consensus 152 ~viG~hg~~~~vp~~s~~~v~~~~---------~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~s~a~a~~~~i~ai~~ 222 (295)
+|||+||+ +++|+||++++++.+ ++++.++++.++++++|+++++.. +||+++||+|.++++++++|++
T Consensus 183 ~v~G~Hg~-~~~p~~s~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~eii~~~-~kgst~~~~a~a~~~ii~ai~~ 260 (331)
T 1pzg_A 183 TVIGTHGD-CMVPLVRYITVNGYPIQKFIKDGVVTEKQLEEIAEHTKVSGGEIVRFL-GQGSAYYAPAASAVAMATSFLN 260 (331)
T ss_dssp CEEBCSST-TCEECGGGCEETTEEHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHH-SSSCCCHHHHHHHHHHHHHHHT
T ss_pred EEecCCCC-CEeeeeecceECCEEHHHHhhcccCCHHHHHHHHHHHHhccHHHHHhh-cCCCccchHHHHHHHHHHHHHh
Confidence 99999998 899999999886531 456678889999999999999852 5689999999999999999999
Q ss_pred CcCCCCceeEEE-EeeCCC-CCccEEEEeEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHHhh
Q 022546 223 GLNGVPDIVECT-FVQSSV-TELPFFASKVRLGKNGADEVLGLGPLSDYEKQGLESLKPELKASIEKGIQ 290 (295)
Q Consensus 223 ~~~~~~~v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~~~~~ 290 (295)
|++ .+++++ +++|+| .++++||+||++|++|+++++++ +|+++|+++|++|++.|++.+++...
T Consensus 261 ~~~---~~~~~~v~~~G~~g~~~~~~~vP~~vg~~Gv~~i~~~-~L~~~e~~~l~~s~~~l~~~~~~~~~ 326 (331)
T 1pzg_A 261 DEK---RVIPCSVYCNGEYGLKDMFIGLPAVIGGAGIERVIEL-ELNEEEKKQFQKSVDDVMALNKAVAA 326 (331)
T ss_dssp TCC---EEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCC---cEEEEEEEecCccCCCceEEEEEEEEeCCeeEEecCC-CCCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 964 588886 789998 57999999999999999999997 99999999999999999999987643
No 33
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=100.00 E-value=1.3e-52 Score=385.09 Aligned_cols=274 Identities=23% Similarity=0.295 Sum_probs=237.5
Q ss_pred CeEEEEeCC----C--chhHHHhhhCCCCCCeEEEeeCCCchhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHH
Q 022546 8 SSLSLYDIA----N--TPGVAADVSHINSPAQVEGYAGEEQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSL 81 (295)
Q Consensus 8 ~ei~L~D~~----~--~~~~~~Dl~~~~~~~~v~~~~~t~d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~i 81 (295)
.||+|+|++ + +.+.++||.|+..+..... ..++|++++++|||+||+++|.++++|++|.+++.+|+++++++
T Consensus 37 ~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i-~~~~~~~~al~~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i 115 (329)
T 1b8p_A 37 VILQLLEIPNEKAQKALQGVMMEIDDCAFPLLAGM-TAHADPMTAFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQ 115 (329)
T ss_dssp EEEEEECCSCHHHHHHHHHHHHHHHTTTCTTEEEE-EEESSHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHH
T ss_pred CEEEEEcCCCccccccchhhHHHHhhhcccccCcE-EEecCcHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence 599999998 5 6789999999743222122 23457789999999999999999999999999999999999999
Q ss_pred HHHHHhhC-CCeEEEEecCCccchHHHHHHHHHHhCCCCCCCeeecchhhHHHHHHHHHhhcCCCCccceE-EEeeCCCC
Q 022546 82 CTAIANYC-PHALVNMISNPVNSTVPIAAEVFKKAGTYDEKKLFGVTTLDVVRAKTFYAGKVNVPVAEVNV-PVIGGHAG 159 (295)
Q Consensus 82 ~~~i~~~~-p~a~viv~tNP~d~~t~~~~~~~k~sg~~~~~kviG~t~ld~~R~~~~la~~l~v~~~~v~~-~viG~hg~ 159 (295)
++.++++| |++|++++|||+|++|+++ ++.+++||++|++|+|.||++|+++++|+++|++|++|++ +|||+||+
T Consensus 116 ~~~i~~~~~p~a~ii~~SNPv~~~t~~~---~~~~~~~p~~~v~g~t~Ld~~r~~~~la~~lgv~~~~v~~~~v~G~Hg~ 192 (329)
T 1b8p_A 116 GKAIDAVASRNIKVLVVGNPANTNAYIA---MKSAPSLPAKNFTAMLRLDHNRALSQIAAKTGKPVSSIEKLFVWGNHSP 192 (329)
T ss_dssp HHHHHHHSCTTCEEEECSSSHHHHHHHH---HHTCTTSCGGGEEECCHHHHHHHHHHHHHHHTCCGGGEESCEEEBCSST
T ss_pred HHHHHHhcCCCeEEEEccCchHHHHHHH---HHHcCCCCHHHEEEeecHHHHHHHHHHHHHhCcCHHHceEEEEEeccCC
Confidence 99999997 9999999999999999987 7888349999999999999999999999999999999995 68999998
Q ss_pred ceeeeccccCcCCCCCC----CHHH--HHHHHHHhhchhhhhhhhccCCCcchhhHHHHHHHHHHHHHcCcCCCCceeEE
Q 022546 160 VTILPLFSQATPKSNNL----SDEE--IKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAVFADACLMGLNGVPDIVEC 233 (295)
Q Consensus 160 ~~~vp~~s~~~v~~~~~----~~~~--~~~i~~~v~~~~~~i~~~~~~kg~~~~s~a~a~~~~i~ai~~~~~~~~~v~~~ 233 (295)
+++|+||++++++.++ ++++ .+++.+++++++++|++.| |. +++++.|.++++++++|+++.. +.++++
T Consensus 193 -s~~p~~s~~~v~g~~~~~~~~~~~~~~~~i~~~v~~~g~eii~~k-g~-~~~~~~a~a~~~~~~ai~~~~~--~~~~~~ 267 (329)
T 1b8p_A 193 -TMYADYRYAQIDGASVKDMINDDAWNRDTFLPTVGKRGAAIIDAR-GV-SSAASAANAAIDHIHDWVLGTA--GKWTTM 267 (329)
T ss_dssp -TCEEECSSCEETTEEHHHHHCCHHHHHHTHHHHHHTHHHHHHHHH-SS-CCHHHHHHHHHHHHHHHHHCCT--TCCEEE
T ss_pred -cEeeehHHCeECCeeHHHHhccchhhHHHHHHHHHHHHHhhhhcc-CC-ChHHHHHHHHHHHHHHHhcCCC--CcEEEE
Confidence 8999999999876432 2223 4789999999999999976 32 3345567789999999999842 247788
Q ss_pred E-EeeCCC--CCccEEEEeEEEcCCceEEEcc-CCCCCHHHHHHHHHHHHHHHHHHHHHhhhh
Q 022546 234 T-FVQSSV--TELPFFASKVRLGKNGADEVLG-LGPLSDYEKQGLESLKPELKASIEKGIQFA 292 (295)
Q Consensus 234 ~-~~~g~~--~~~~~~s~Pv~ig~~Gv~~v~~-~~~L~~~E~~~l~~s~~~l~~~~~~~~~~~ 292 (295)
+ +++|+| ++++|||+||++ ++|++++++ + +|+++|+++|++|++.|++.++.+.+++
T Consensus 268 s~~~~g~yg~~~~~~~s~P~~i-~~Gv~~i~~~~-~l~~~e~~~l~~s~~~l~~~~~~~~~~~ 328 (329)
T 1b8p_A 268 GIPSDGSYGIPEGVIFGFPVTT-ENGEYKIVQGL-SIDAFSQERINVTLNELLEEQNGVQHLL 328 (329)
T ss_dssp EEECCSGGGCCTTCEEEEEEEE-ETTEEEECCCC-CCCHHHHHHHHHHHHHHHHHHHHHGGGG
T ss_pred EEEecCccCCCCCeEEEEEEEE-cCCEEEecCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 7 779988 689999999999 999999998 7 9999999999999999999999998876
No 34
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=100.00 E-value=1.1e-52 Score=381.77 Aligned_cols=267 Identities=23% Similarity=0.283 Sum_probs=211.9
Q ss_pred CCCCCcCeEEEEeCCC--chhHHHhhhCCCC-CCeEEEeeCCCchhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHH
Q 022546 2 KLDPLVSSLSLYDIAN--TPGVAADVSHINS-PAQVEGYAGEEQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIV 78 (295)
Q Consensus 2 ~~~~~~~ei~L~D~~~--~~~~~~Dl~~~~~-~~~v~~~~~t~d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~ 78 (295)
+..+.+++++|+|+++ +++.++|+.|+.. ....+... ++ +++++|||+||++++.|+++|++|.+++.+|++++
T Consensus 20 a~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~--~~-~~a~~~aDvVIi~~~~~~~~g~~r~dl~~~n~~i~ 96 (304)
T 2v6b_A 20 VLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWH--GG-HSELADAQVVILTAGANQKPGESRLDLLEKNADIF 96 (304)
T ss_dssp HHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEE--EC-GGGGTTCSEEEECC------------CHHHHHHHH
T ss_pred HhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEE--CC-HHHhCCCCEEEEcCCCCCCCCCcHHHHHHhHHHHH
Confidence 3467788999999987 6788999998752 12233322 24 58899999999999999999999999999999999
Q ss_pred HHHHHHHHhhCCCeEEEEecCCccchHHHHHHHHHHhCCCCCCCeeec-chhhHHHHHHHHHhhcCCCCccceEEEeeCC
Q 022546 79 KSLCTAIANYCPHALVNMISNPVNSTVPIAAEVFKKAGTYDEKKLFGV-TTLDVVRAKTFYAGKVNVPVAEVNVPVIGGH 157 (295)
Q Consensus 79 ~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~k~sg~~~~~kviG~-t~ld~~R~~~~la~~l~v~~~~v~~~viG~h 157 (295)
+++++.|++++|+++++++|||+|++++++ ++.+ |++||||+ |.||++|+++++|+++|+++++|+++|||||
T Consensus 97 ~~i~~~i~~~~p~~~vi~~tNP~~~~~~~~---~~~~---~~~rviG~gt~Ld~~r~~~~la~~l~v~~~~v~~~v~G~H 170 (304)
T 2v6b_A 97 RELVPQITRAAPDAVLLVTSNPVDLLTDLA---TQLA---PGQPVIGSGTVLDSARFRHLMAQHAGVDGTHAHGYVLGEH 170 (304)
T ss_dssp HHHHHHHHHHCSSSEEEECSSSHHHHHHHH---HHHS---CSSCEEECTTHHHHHHHHHHHHHHHTSCGGGEECCEEESS
T ss_pred HHHHHHHHHhCCCeEEEEecCchHHHHHHH---HHhC---ChhcEEeCCcCchHHHHHHHHHHHhCcCHHHceEEEecCC
Confidence 999999999999999999999999999876 5654 78999999 9999999999999999999999999999999
Q ss_pred CCceeeeccccCcCCCCC-----------CCHHHHHHHHHHhhchhhhhhhhccCCCcchhhHHHHHHHHHHHHHcCcCC
Q 022546 158 AGVTILPLFSQATPKSNN-----------LSDEEIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAVFADACLMGLNG 226 (295)
Q Consensus 158 g~~~~vp~~s~~~v~~~~-----------~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~s~a~a~~~~i~ai~~~~~~ 226 (295)
|+ +++|+||++++++.+ ++++.++++.+++++++++|++ +||+++|++|.++++++++|++|.+
T Consensus 171 g~-~~~p~~s~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~eii~---~kg~t~~~~a~a~~~~~~ai~~~~~- 245 (304)
T 2v6b_A 171 GD-SEVLAWSSAMVAGMPVADFMQAQNLPWNEQVRAKIDEGTRNAAASIIE---GKRATYYGIGAALARITEAVLRDRR- 245 (304)
T ss_dssp ST-TEEECGGGCEETTEEHHHHHHHHTCCCSHHHHHHHHHHHTC--------------CCHHHHHHHHHHHHHHHTTCC-
T ss_pred CC-ceeeehhHccCCCEEHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHh---ccCCcHHHHHHHHHHHHHHHHhCCC-
Confidence 99 899999999986531 3566789999999999999998 6689999999999999999999964
Q ss_pred CCceeEEE-EeeCCCCCccEEEEeEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 022546 227 VPDIVECT-FVQSSVTELPFFASKVRLGKNGADEVLGLGPLSDYEKQGLESLKPELKASIEKG 288 (295)
Q Consensus 227 ~~~v~~~~-~~~g~~~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~~~ 288 (295)
.+++++ +++| | . +|||+||++|++|+++++++ +|+++|+++|++|++.|++.+++.
T Consensus 246 --~~~~~~~~~~g-y-g-~~~~~P~~ig~~Gv~~i~~~-~l~~~e~~~l~~s~~~l~~~~~~~ 302 (304)
T 2v6b_A 246 --AVLTVSAPTPE-Y-G-VSLSLPRVVGRQGVLSTLHP-KLTGDEQQKLEQSAGVLRGFKQQL 302 (304)
T ss_dssp --EEEEEEEEETT-T-T-EEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHC-----
T ss_pred --cEEEEEEEECC-c-C-cEEEEEEEEeCCeeEEEcCC-CCCHHHHHHHHHHHHHHHHHHHHh
Confidence 578887 7899 8 3 99999999999999999997 999999999999999999888753
No 35
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=100.00 E-value=5.4e-50 Score=366.31 Aligned_cols=269 Identities=28% Similarity=0.449 Sum_probs=238.1
Q ss_pred CCCcCeEEEEeCCC--chhHHHhhhCCC---CCCeEEEeeCCCchhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHH
Q 022546 4 DPLVSSLSLYDIAN--TPGVAADVSHIN---SPAQVEGYAGEEQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIV 78 (295)
Q Consensus 4 ~~~~~ei~L~D~~~--~~~~~~Dl~~~~---~~~~v~~~~~t~d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~ 78 (295)
.+..++++|+|+++ +++...|+.|.. ...++. . + | ++++++||+||++.+.++++|++|++++.+|++++
T Consensus 22 ~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~--~-~-d-~~~~~~aDvViiav~~~~~~g~~r~dl~~~n~~i~ 96 (319)
T 1a5z_A 22 KGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIY--A-G-D-YADLKGSDVVIVAAGVPQKPGETRLQLLGRNARVM 96 (319)
T ss_dssp HTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEE--E-C-C-GGGGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHH
T ss_pred CCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEE--e-C-C-HHHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHH
Confidence 45577999999986 567777777643 122333 2 2 4 47899999999999999999999999999999999
Q ss_pred HHHHHHHHhhCCCeEEEEecCCccchHHHHHHHHHHhCCCCCCCeeec-chhhHHHHHHHHHhhcCCCCccceEEEeeCC
Q 022546 79 KSLCTAIANYCPHALVNMISNPVNSTVPIAAEVFKKAGTYDEKKLFGV-TTLDVVRAKTFYAGKVNVPVAEVNVPVIGGH 157 (295)
Q Consensus 79 ~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~k~sg~~~~~kviG~-t~ld~~R~~~~la~~l~v~~~~v~~~viG~h 157 (295)
+++++.|++++|+++++++|||++++++++ ++.+| ||++||||+ |.||++|+++++|+++|++|++|+++|||+|
T Consensus 97 ~~i~~~i~~~~~~~~ii~~tNp~~~~~~~~---~~~~~-~~~~rviG~~t~ld~~r~~~~la~~lgv~~~~v~~~v~G~h 172 (319)
T 1a5z_A 97 KEIARNVSKYAPDSIVIVVTNPVDVLTYFF---LKESG-MDPRKVFGSGTVLDTARLRTLIAQHCGFSPRSVHVYVIGEH 172 (319)
T ss_dssp HHHHHHHHHHCTTCEEEECSSSHHHHHHHH---HHHHT-CCTTTEEECTTHHHHHHHHHHHHHHHTCCGGGEECCEEBCS
T ss_pred HHHHHHHHhhCCCeEEEEeCCcHHHHHHHH---HHHhC-CChhhEEeeCccHHHHHHHHHHHHHhCcCHHHceEEEEeCC
Confidence 999999999999999999999999999886 68888 999999999 8999999999999999999999999999999
Q ss_pred CCceeeeccccCcCCCC-------C---CCHHHHHHHHHHhhchhhhhhhhccCCCcchhhHHHHHHHHHHHHHcCcCCC
Q 022546 158 AGVTILPLFSQATPKSN-------N---LSDEEIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAVFADACLMGLNGV 227 (295)
Q Consensus 158 g~~~~vp~~s~~~v~~~-------~---~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~s~a~a~~~~i~ai~~~~~~~ 227 (295)
|+ +++|+||++++++. . ++++.++++.++++++++++++ +||+++|++|.++++++++|++|.+
T Consensus 173 g~-~~~p~~s~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~eii~---~kg~~~~~~a~a~~~~~~ai~~~~~-- 246 (319)
T 1a5z_A 173 GD-SEVPVWSGAMIGGIPLQNMCQVCQKCDSKILENFAEKTKRAAYEIIE---RKGATHYAIALAVADIVESIFFDEK-- 246 (319)
T ss_dssp ST-TCEECGGGCEETTEEHHHHHTTSSSCCHHHHHHHHHHHHHHHHHHHH---HHSCCCHHHHHHHHHHHHHHHTTCC--
T ss_pred CC-CcccchhhceECCEEHHHHhhcccccCHHHHHHHHHHHHHhhhhhhc---cCCchHHHHHHHHHHHHHHHHhCCC--
Confidence 98 89999999988652 1 4566788999999999999999 4578999999999999999999854
Q ss_pred CceeEEE-EeeCCC-CCccEEEEeEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHHh
Q 022546 228 PDIVECT-FVQSSV-TELPFFASKVRLGKNGADEVLGLGPLSDYEKQGLESLKPELKASIEKGI 289 (295)
Q Consensus 228 ~~v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~~~~ 289 (295)
.+++++ +++|+| .++++||+||++|++|+++++++ +|+++|+++|++|++.|++.++++.
T Consensus 247 -~~~~~~~~~~g~~g~~~~~~~vP~~vg~~Gv~~i~~~-~L~~~e~~~l~~s~~~l~~~~~~~~ 308 (319)
T 1a5z_A 247 -RVLTLSVYLEDYLGVKDLCISVPVTLGKHGVERILEL-NLNEEELEAFRKSASILKNAINEIT 308 (319)
T ss_dssp -EEEEEEEEESSBTTBCSEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CEEEEEEEecCccCccceEEEEEEEEeCCceEEEecC-CCCHHHHHHHHHHHHHHHHHHHHhc
Confidence 578887 789988 57899999999999999999997 9999999999999999999998763
No 36
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=100.00 E-value=1.2e-48 Score=355.98 Aligned_cols=270 Identities=18% Similarity=0.228 Sum_probs=231.4
Q ss_pred CCCcCeEEEEeCCC--chhHHHhhhCCC--CCCeEEEeeCCCchhhhcCCCcEEEEcCCCCCC----CCCCHHHHHHHHH
Q 022546 4 DPLVSSLSLYDIAN--TPGVAADVSHIN--SPAQVEGYAGEEQLGKALEGSDVVIIPAGVPRK----PGMTRDDLFNINA 75 (295)
Q Consensus 4 ~~~~~ei~L~D~~~--~~~~~~Dl~~~~--~~~~v~~~~~t~d~~~al~daDiVvi~~g~~~~----~g~~r~~~~~~n~ 75 (295)
.+...+++|+|+++ +++.+.|+.|.. ....++.+. +|+ +++++||+||++.+.+++ +|++|++++.+|+
T Consensus 23 ~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~d~-~~~~~aDvViiav~~~~~~~~~~g~~r~~l~~~n~ 99 (309)
T 1hyh_A 23 QGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVI--NDW-AALADADVVISTLGNIKLQQDNPTGDRFAELKFTS 99 (309)
T ss_dssp HTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEE--SCG-GGGTTCSEEEECCSCGGGTC-------CTTHHHHH
T ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEe--CCH-HHhCCCCEEEEecCCcccCCCCCCCCHHHHHHHHH
Confidence 34467999999987 667777877543 111233322 355 889999999999999988 9999999999999
Q ss_pred HHHHHHHHHHHhhCCCeEEEEecCCccchHHHHHHHHHHhCCCCCCCeeec-chhhHHHHHHHHHhhcCCCCccceEEEe
Q 022546 76 GIVKSLCTAIANYCPHALVNMISNPVNSTVPIAAEVFKKAGTYDEKKLFGV-TTLDVVRAKTFYAGKVNVPVAEVNVPVI 154 (295)
Q Consensus 76 ~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~k~sg~~~~~kviG~-t~ld~~R~~~~la~~l~v~~~~v~~~vi 154 (295)
++++++++.+.+++|+++++++|||+|++++++ ++.++ +|++||+|+ |.||++|++..++++++++++++++++|
T Consensus 100 ~i~~~i~~~i~~~~~~~~ii~~tNp~~~~~~~~---~~~~~-~~~~rvig~gt~ld~~r~~~~~a~~l~~~~~~v~~~v~ 175 (309)
T 1hyh_A 100 SMVQSVGTNLKESGFHGVLVVISNPVDVITALF---QHVTG-FPAHKVIGTGTLLDTARMQRAVGEAFDLDPRSVSGYNL 175 (309)
T ss_dssp HHHHHHHHHHHHTTCCSEEEECSSSHHHHHHHH---HHHHC-CCGGGEEECTTHHHHHHHHHHHHHHHTCCGGGCBCCEE
T ss_pred HHHHHHHHHHHHHCCCcEEEEEcCcHHHHHHHH---HHhcC-CCHHHEeecCccchHHHHHHHHHHHhCCChhheEEEEE
Confidence 999999999999999999999999999999886 67777 999999999 9999999999999999999999999999
Q ss_pred eCCCCceeeeccccCcCCCCC------CCHHHHHHHHHHhhchhhhhhhhccCCCcchhhHHHHHHHHHHHHHcCcCCCC
Q 022546 155 GGHAGVTILPLFSQATPKSNN------LSDEEIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAVFADACLMGLNGVP 228 (295)
Q Consensus 155 G~hg~~~~vp~~s~~~v~~~~------~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~s~a~a~~~~i~ai~~~~~~~~ 228 (295)
|+||+ +++|+||++.+++.+ ++++.|+++.++++++++++++. ||+++|++|.++++++++|++|++
T Consensus 176 G~hg~-~~~~~~s~~~v~g~~~~~~~~~~~~~~~~~~~~v~~~g~~ii~~---kg~~~~~~a~a~~~~~~ai~~~~~--- 248 (309)
T 1hyh_A 176 GEHGN-SQFVAWSTVRVMGQPIVTLADAGDIDLAAIEEEARKGGFTVLNG---KGYTSYGVATSAIRIAKAVMADAH--- 248 (309)
T ss_dssp BCTTT-TCEECTTTCEETTEEGGGC-----CCHHHHHHHHHHHHHHHHHH---HSSCCHHHHHHHHHHHHHHHTTCC---
T ss_pred eCCCC-cEeeccccceECCEEHHHhccCCHHHHHHHHHHHHHhHHHHHhc---cCCchHHHHHHHHHHHHHHHcCCC---
Confidence 99998 899999999886532 45667899999999999999995 478999999999999999999975
Q ss_pred ceeEEE-EeeCCCCCccEEEEeEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHHhhh
Q 022546 229 DIVECT-FVQSSVTELPFFASKVRLGKNGADEVLGLGPLSDYEKQGLESLKPELKASIEKGIQF 291 (295)
Q Consensus 229 ~v~~~~-~~~g~~~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~~~~~~ 291 (295)
.+++++ +++| +++++|+||++|++|+++++++ +|+++|+++|++|++.|++.++...+.
T Consensus 249 ~~~~~~~~~~g---~~~~~~vP~~i~~~Gv~~i~~~-~l~~~e~~~l~~s~~~l~~~~~~~~~~ 308 (309)
T 1hyh_A 249 AELVVSNRRDD---MGMYLSYPAIIGRDGVLAETTL-DLTTDEQEKLLQSRDYIQQRFDEIVDT 308 (309)
T ss_dssp EEEEEEEECTT---TCSEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cEEEEEEEECC---CCeEEEEEEEEeCCceEEEeCC-CCCHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 578876 7788 6899999999999999999997 999999999999999999999987753
No 37
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=100.00 E-value=2.7e-46 Score=341.57 Aligned_cols=267 Identities=30% Similarity=0.456 Sum_probs=237.2
Q ss_pred eEEEEeCCC--chhHHHhhhCCC----CCCeEEEeeCCCchhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHH
Q 022546 9 SLSLYDIAN--TPGVAADVSHIN----SPAQVEGYAGEEQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLC 82 (295)
Q Consensus 9 ei~L~D~~~--~~~~~~Dl~~~~----~~~~v~~~~~t~d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~i~ 82 (295)
+++|+|+++ +++.++|+.+.. ...++.. ++|+ +++++||+||++.|.|+++|++|.+++.+|++++++++
T Consensus 30 ~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~---t~d~-~a~~~aDiVi~avg~p~~~g~~r~d~~~~~~~i~~~i~ 105 (317)
T 2ewd_A 30 DVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIG---TDDY-ADISGSDVVIITASIPGRPKDDRSELLFGNARILDSVA 105 (317)
T ss_dssp EEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEE---ESCG-GGGTTCSEEEECCCCSSCCSSCGGGGHHHHHHHHHHHH
T ss_pred eEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEE---CCCH-HHhCCCCEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHH
Confidence 699999987 566678887642 1234553 2465 89999999999999999999999999999999999999
Q ss_pred HHHHhhCCCeEEEEecCCccchHHHHHHHHHHhCCCCCCCeeec-chhhHHHHHHHHHhhcCCCCccceEEEeeCCCCce
Q 022546 83 TAIANYCPHALVNMISNPVNSTVPIAAEVFKKAGTYDEKKLFGV-TTLDVVRAKTFYAGKVNVPVAEVNVPVIGGHAGVT 161 (295)
Q Consensus 83 ~~i~~~~p~a~viv~tNP~d~~t~~~~~~~k~sg~~~~~kviG~-t~ld~~R~~~~la~~l~v~~~~v~~~viG~hg~~~ 161 (295)
+.|.+++|+++++++|||++++++.+ ++.++ +|++||+|+ |.+|+.|++..+++++|+++++++++|+|+||+ +
T Consensus 106 ~~i~~~~~~~iii~~sNp~~~~~~~~---~~~~~-~~~~rviG~~t~ld~~r~~~~la~~lg~~~~~v~~~v~g~Hg~-~ 180 (317)
T 2ewd_A 106 EGVKKYCPNAFVICITNPLDVMVSHF---QKVSG-LPHNKVCGMAGVLDSSRFRTFIAQHFGVNASDVSANVIGGHGD-G 180 (317)
T ss_dssp HHHHHHCTTSEEEECCSSHHHHHHHH---HHHHC-CCGGGEEESCHHHHHHHHHHHHHHHHTSCGGGEECCEEBCSST-T
T ss_pred HHHHHHCCCcEEEEeCChHHHHHHHH---HHhhC-CCHHHEEeccCcHHHHHHHHHHHHHhCcChhhceEEEEecCCC-c
Confidence 99999999999999999999999876 68888 999999999 799999999999999999999999999999998 8
Q ss_pred eeeccccCcCCCC---------CCCHHHHHHHHHHhhchhhhhhhhccCCCcchhhHHHHHHHHHHHHHcCcCCCCceeE
Q 022546 162 ILPLFSQATPKSN---------NLSDEEIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAVFADACLMGLNGVPDIVE 232 (295)
Q Consensus 162 ~vp~~s~~~v~~~---------~~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~s~a~a~~~~i~ai~~~~~~~~~v~~ 232 (295)
++|+||.+++++. .++.++++++.++++.+++++++.. |+|+++|++|.++++++++|++|++ .+++
T Consensus 181 ~~~~~~~a~v~g~~~~~~~~~g~~~~~~id~~~~~~~~~~~ei~~~~-g~g~~~~~~a~a~~~~~~ai~~~~~---~~~~ 256 (317)
T 2ewd_A 181 MVPATSSVSVGGVPLSSFIKQGLITQEQIDEIVCHTRIAWKEVADNL-KTGTAYFAPAAAAVKMAEAYLKDKK---AVVP 256 (317)
T ss_dssp CEECGGGCEETTEEHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHH-SSSCCCHHHHHHHHHHHHHHHTTCC---EEEE
T ss_pred eeEEeeccccCCEEHHHHHhccCCCHHHHHHHHHHHHhhHHHHHHhh-cCCchHHHHHHHHHHHHHHHHcCCC---eEEE
Confidence 9999999977652 1466778888888888999999864 7889999999999999999999864 5788
Q ss_pred EE-EeeCCC-CCccEEEEeEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHHh
Q 022546 233 CT-FVQSSV-TELPFFASKVRLGKNGADEVLGLGPLSDYEKQGLESLKPELKASIEKGI 289 (295)
Q Consensus 233 ~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~~~~ 289 (295)
++ +++|+| .+++|||+||++|++|+++++++ +|+++|+++|++|++.|++.+++..
T Consensus 257 ~~~~~~G~~g~~~~~~~~P~~i~~~Gv~~i~~~-~l~~~e~~~l~~s~~~l~~~~~~~~ 314 (317)
T 2ewd_A 257 CSAFCSNHYGVKGIYMGVPTIIGKNGVEDILEL-DLTPLEQKLLGESINEVNTISKVLD 314 (317)
T ss_dssp EEEEESSSTTCSSEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEecCccCCcceEEEeEEEEcCCeeEEecCC-CCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 86 789998 57999999999999999999997 9999999999999999999988753
No 38
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=100.00 E-value=9.6e-44 Score=334.47 Aligned_cols=268 Identities=12% Similarity=0.090 Sum_probs=216.2
Q ss_pred CCC-cCeEEEEeCCC-chhHHHhhhCCC--CCCeEEEeeCCCchhhhcCCCcEEEEcCCCCCCCCCCHH-----------
Q 022546 4 DPL-VSSLSLYDIAN-TPGVAADVSHIN--SPAQVEGYAGEEQLGKALEGSDVVIIPAGVPRKPGMTRD----------- 68 (295)
Q Consensus 4 ~~~-~~ei~L~D~~~-~~~~~~Dl~~~~--~~~~v~~~~~t~d~~~al~daDiVvi~~g~~~~~g~~r~----------- 68 (295)
.++ ++||+|+|+++ ....+.|+.+.. ...+++. ++|+++|++||||||+++|.++++|++|+
T Consensus 27 ~~l~~~el~L~Di~~~~~~~~~~~~~~~~~~~~~v~~---t~d~~~al~~AD~Viitagvg~~~~~~rd~~i~~k~glvg 103 (417)
T 1up7_A 27 EDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLI---SDTFEGAVVDAKYVIFQFRPGGLKGRENDEGIPLKYGLIG 103 (417)
T ss_dssp TTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEEEE---CSSHHHHHTTCSEEEECCCTTHHHHHHHHHHGGGGGTCCC
T ss_pred cCCCcCEEEEEeCCHHHHHHHHHHHHHHhhCCeEEEE---eCCHHHHhCCCCEEEEcCCCCCCCccchhhhhhhhcCccc
Confidence 566 89999999987 322366776532 1134443 46778999999999999999887777764
Q ss_pred ---------HHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCccchHHHHHHHHHHhCCCCCCCeeecchhhHHHHHHHHH
Q 022546 69 ---------DLFNINAGIVKSLCTAIANYCPHALVNMISNPVNSTVPIAAEVFKKAGTYDEKKLFGVTTLDVVRAKTFYA 139 (295)
Q Consensus 69 ---------~~~~~n~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~k~sg~~~~~kviG~t~ld~~R~~~~la 139 (295)
.++.+|+++++++++.|+++| |||+||+|||+|++|+++ +|.+ |++||||+|... .|+++++|
T Consensus 104 qeT~G~GGi~~~~rni~i~~~i~~~i~~~~-~A~lin~TNPvdi~t~a~---~k~~---p~~rviG~c~~~-~r~~~~la 175 (417)
T 1up7_A 104 QETTGVGGFSAALRAFPIVEEYVDTVRKTS-NATIVNFTNPSGHITEFV---RNYL---EYEKFIGLCNVP-INFIREIA 175 (417)
T ss_dssp CSSSTHHHHHHHHHHHHHHHHHHHHHHHTT-CCEEEECSSSHHHHHHHH---HHTT---CCSSEEECCSHH-HHHHHHHH
T ss_pred ccccccchhHHhhccHHHHHHHHHHHHHHC-CEEEEEeCChHHHHHHHH---HHhC---CCCCEEEeCCCH-HHHHHHHH
Confidence 357999999999999999999 999999999999999986 6754 677999997543 49999999
Q ss_pred hhcCCCCccceEEEee-----------CCCCceeeeccccC---cCCC---CCC---------------------CHHHH
Q 022546 140 GKVNVPVAEVNVPVIG-----------GHAGVTILPLFSQA---TPKS---NNL---------------------SDEEI 181 (295)
Q Consensus 140 ~~l~v~~~~v~~~viG-----------~hg~~~~vp~~s~~---~v~~---~~~---------------------~~~~~ 181 (295)
+.+|++|++|+++++| +||+ +++|.||.. ++.+ .++ +++.+
T Consensus 176 ~~lgv~~~~v~~~v~GlNH~~w~~~~~~hG~-d~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~p~~y~~~y~~~~~~~ 254 (417)
T 1up7_A 176 EMFSARLEDVFLKYYGLNHLSFIEKVFVKGE-DVTEKVFENLKLKLSNIPDEDFPTWFYDSVRLIVNPYLRYYLMEKKMF 254 (417)
T ss_dssp HHTTCCGGGEEEEEEEETTEEEEEEEEETTE-ECHHHHHHHHTTC---CCTTSCCHHHHHHHCSEECGGGHHHHTHHHHH
T ss_pred HHhCCCHHHCeEEEEeecceeeEEEeecCCc-EehhhHHHHHHHhhCCCcCCchHHHHHHhcCCCccchhhhccCCHHHH
Confidence 9999999999999999 9998 899999985 4422 223 12333
Q ss_pred HHH---------HHHhhchhhhhh--------hhccCCCcchhhHHHHHHHHHHHHHcCcCCCCceeEEE-EeeCCC---
Q 022546 182 KAL---------TKRTQDGGTEVV--------EAKAGKGSATLSMAYAGAVFADACLMGLNGVPDIVECT-FVQSSV--- 240 (295)
Q Consensus 182 ~~i---------~~~v~~~~~~i~--------~~~~~kg~~~~s~a~a~~~~i~ai~~~~~~~~~v~~~~-~~~g~~--- 240 (295)
+++ .+++++.+++++ +. .+||+++| |.+++++++||++|++ .+++++ +++|+|
T Consensus 255 ~~~~~~~~r~~~~~~~~~~~~~i~~~~~~~~~~l-~~kg~t~~--~~~a~~ii~AI~~d~~---~~~~vsv~n~G~i~~l 328 (417)
T 1up7_A 255 KKISTHELRAREVMKIEKELFEKYRTAVEIPEEL-TKRGGSMY--STAAAHLIRDLETDEG---KIHIVNTRNNGSIENL 328 (417)
T ss_dssp HHHHTSCCHHHHHHHHHHHHHHHHTTCSSCCGGG-GGSTTTTH--HHHHHHHHHHHHSSSC---EEEEEEEECTTSSTTS
T ss_pred HhccccchHHHHHHHHHHHHHHHHHhhcccchhh-hhcCCcHH--HHHHHHHHHHHHcCCC---eEEEEEEecCCccCCC
Confidence 444 466777788888 22 24566755 6999999999999975 588887 779987
Q ss_pred CCccEEEEeEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHHhh
Q 022546 241 TELPFFASKVRLGKNGADEVLGLGPLSDYEKQGLESLKPELKASIEKGIQ 290 (295)
Q Consensus 241 ~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~~~~~ 290 (295)
|+|+++|+||+||++|++++... +|+++|+++++.++...+..++.+++
T Consensus 329 p~d~~vevP~~vg~~Gi~~i~~~-~L~~~e~~~l~~~~~~e~l~veA~~~ 377 (417)
T 1up7_A 329 PDDYVLEIPCYVRSGRVHTLSQG-KGDHFALSFIHAVKMYERLTIEAYLK 377 (417)
T ss_dssp CTTCEEEEEEEEETTEEEEBCCC-CCCHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCeEEEEeEEEeCCceEEeecC-CCCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 58999999999999999999886 99999999999999999988887753
No 39
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=100.00 E-value=5.6e-42 Score=314.23 Aligned_cols=274 Identities=25% Similarity=0.348 Sum_probs=231.5
Q ss_pred CeEEEEeCCC----chhHHHhhhCCCCCCeEEEeeCCCchhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q 022546 8 SSLSLYDIAN----TPGVAADVSHINSPAQVEGYAGEEQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCT 83 (295)
Q Consensus 8 ~ei~L~D~~~----~~~~~~Dl~~~~~~~~v~~~~~t~d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~i~~ 83 (295)
.+++|+|+++ ..+.++|+.|+..... .....+.+++++++|+|+||.+++.+++++++|.+++..|+.+++++++
T Consensus 36 ~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~-~di~~~~~~~~a~~~~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~ 114 (327)
T 1y7t_A 36 VILQLLEIPQAMKALEGVVMELEDCAFPLL-AGLEATDDPKVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGR 114 (327)
T ss_dssp EEEEEECCGGGHHHHHHHHHHHHTTTCTTE-EEEEEESCHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEeCCCchhhccchhhhhhccccccc-CCeEeccChHHHhCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 4999999874 4678899998643211 1112234667999999999999999999999999999999999999999
Q ss_pred HHHhhC-CCeEEEEecCCccchHHHHHHHHHHhCCCCCCCeeecchhhHHHHHHHHHhhcCCCCccce-EEEeeCCCCce
Q 022546 84 AIANYC-PHALVNMISNPVNSTVPIAAEVFKKAGTYDEKKLFGVTTLDVVRAKTFYAGKVNVPVAEVN-VPVIGGHAGVT 161 (295)
Q Consensus 84 ~i~~~~-p~a~viv~tNP~d~~t~~~~~~~k~sg~~~~~kviG~t~ld~~R~~~~la~~l~v~~~~v~-~~viG~hg~~~ 161 (295)
.+++++ |+++++++|||+|+++++. ++.++.+|+.++.|.|.+|+.|++..+++++|+++..++ .+|+|+|++ +
T Consensus 115 a~~~~~~~~~~vvv~snp~~~~~~~~---~~~~~~~~p~~~yg~tkl~~er~~~~~a~~~g~~~~~vr~~~V~G~h~~-~ 190 (327)
T 1y7t_A 115 ALAEVAKKDVKVLVVGNPANTNALIA---YKNAPGLNPRNFTAMTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHSS-T 190 (327)
T ss_dssp HHHHHSCTTCEEEECSSSHHHHHHHH---HHTCTTSCGGGEEECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSST-T
T ss_pred HHHhhcCCCeEEEEeCCchhhhHHHH---HHHcCCCChhheeccchHHHHHHHHHHHHHhCcChhheeeeEEEcCCCC-e
Confidence 999997 9999999999999998875 566623899999999999999999999999999999998 578999998 8
Q ss_pred eeeccccCcCCCCC----CCHHH-HHHHHHHhhchhhhhhhhccCCCcchhhHHHHHHHHHHHHHcCcCCCCceeEEE-E
Q 022546 162 ILPLFSQATPKSNN----LSDEE-IKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAVFADACLMGLNGVPDIVECT-F 235 (295)
Q Consensus 162 ~vp~~s~~~v~~~~----~~~~~-~~~i~~~v~~~~~~i~~~~~~kg~~~~s~a~a~~~~i~ai~~~~~~~~~v~~~~-~ 235 (295)
++|.|+++.+.+.+ ++.+. ++++.++++++|++|++.| | +++++++|.++++++++|++|++. +.+++++ +
T Consensus 191 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~v~~~g~~ii~~k-g-~~~~~~~a~a~~~~~~~i~~~~~~-~~~~~~~~~ 267 (327)
T 1y7t_A 191 MFPDLFHAEVDGRPALELVDMEWYEKVFIPTVAQRGAAIIQAR-G-ASSAASAANAAIEHIRDWALGTPE-GDWVSMAVP 267 (327)
T ss_dssp CEEECSSCEETTEEGGGTSCHHHHHHTHHHHHHHHHHHHHHHH-S-SCCHHHHHHHHHHHHHHHHTBCCT-TCCEEEEEE
T ss_pred EEEEeeeeeeCCeeHHHhccchhHHHHHHHHHHHHHHHHHHcc-C-CCchHHHHHHHHHHHHHHHcCCCC-CeEEEEEEE
Confidence 99999998776532 23322 4789999999999999976 3 234556789999999999999631 2477887 7
Q ss_pred eeCCC--CCccEEEEeEEEcCCceEEEcc-CCCCCHHHHHHHHHHHHHHHHHHHHHhhh
Q 022546 236 VQSSV--TELPFFASKVRLGKNGADEVLG-LGPLSDYEKQGLESLKPELKASIEKGIQF 291 (295)
Q Consensus 236 ~~g~~--~~~~~~s~Pv~ig~~Gv~~v~~-~~~L~~~E~~~l~~s~~~l~~~~~~~~~~ 291 (295)
++|+| ++++|||+||++ ++|++++++ + +|+++|+++|++|++.|+++++.+.++
T Consensus 268 ~~g~yg~~~~~~~~~P~~i-~~G~~~i~~~~-~l~~~e~~~l~~s~~~l~~~~~~~~~~ 324 (327)
T 1y7t_A 268 SQGEYGIPEGIVYSFPVTA-KDGAYRVVEGL-EINEFARKRMEITAQELLDEMEQVKAL 324 (327)
T ss_dssp CSSGGGCCTTSEEEEEEEE-ETTEEEECCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ecCccCCCCCeEEEEEEEE-cCCeEEecCCC-CCCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 79988 589999999999 999999988 6 999999999999999999999988764
No 40
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=100.00 E-value=2.5e-41 Score=320.81 Aligned_cols=268 Identities=14% Similarity=0.166 Sum_probs=211.1
Q ss_pred CCC-cCeEEEEeCCC--c--hhHHHhhhC-----CCCCCeEEEeeCCCchhhhcCCCcEEEEcCCCCCCCCCCHHH----
Q 022546 4 DPL-VSSLSLYDIAN--T--PGVAADVSH-----INSPAQVEGYAGEEQLGKALEGSDVVIIPAGVPRKPGMTRDD---- 69 (295)
Q Consensus 4 ~~~-~~ei~L~D~~~--~--~~~~~Dl~~-----~~~~~~v~~~~~t~d~~~al~daDiVvi~~g~~~~~g~~r~~---- 69 (295)
.++ ++||+|+|+++ . ++ +.|+.+ ...+.+++. |+|+++|++|||+||++++.++++|++|++
T Consensus 32 ~~l~~~ev~L~Di~~~~e~~~~-~~~~~~~~~~~~~~~~~i~~---t~D~~eal~gAD~VVitagv~~~~~~~rd~~ip~ 107 (450)
T 1s6y_A 32 HELPVGELWLVDIPEGKEKLEI-VGALAKRMVEKAGVPIEIHL---TLDRRRALDGADFVTTQFRVGGLEARAKDERIPL 107 (450)
T ss_dssp TTCCEEEEEEECCGGGHHHHHH-HHHHHHHHHHHTTCCCEEEE---ESCHHHHHTTCSEEEECCCTTHHHHHHHHHHTGG
T ss_pred CCCCCCEEEEEEcCCChHHHHH-HHHHHHHHHhhcCCCcEEEE---eCCHHHHhCCCCEEEEcCCCCCCcchhhhhhhhh
Confidence 456 89999999976 2 22 233332 223445654 357789999999999999999888887764
Q ss_pred ----------------HHHHHHHHHHHHHHHHHhhCCCeEEEEecCCccchHHHHHHHHHHhCCCCCCCeeecchhhHHH
Q 022546 70 ----------------LFNINAGIVKSLCTAIANYCPHALVNMISNPVNSTVPIAAEVFKKAGTYDEKKLFGVTTLDVVR 133 (295)
Q Consensus 70 ----------------~~~~n~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~k~sg~~~~~kviG~t~ld~~R 133 (295)
++.+|+++++++++.|+++||+||+|++|||+|++|+++ +|.+ |++||||+|.+. .|
T Consensus 108 ~~g~~~~et~G~ggi~~~~rni~i~~~i~~~i~~~~P~a~ii~~tNPvdivT~a~---~k~~---p~~rViG~c~~~-~r 180 (450)
T 1s6y_A 108 KYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINFTNPAGMVTEAV---LRYT---KQEKVVGLCNVP-IG 180 (450)
T ss_dssp GGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHHHHHH---HHHC---CCCCEEECCSHH-HH
T ss_pred hcCcccccccccchHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHHH---HHhC---CCCCEEEeCCcH-HH
Confidence 489999999999999999999999999999999999987 6764 678999997654 59
Q ss_pred HHHHHHhhcCCCCccceEEEee-----------CCCCceeeeccccCcCC----C--------CCCC-------------
Q 022546 134 AKTFYAGKVNVPVAEVNVPVIG-----------GHAGVTILPLFSQATPK----S--------NNLS------------- 177 (295)
Q Consensus 134 ~~~~la~~l~v~~~~v~~~viG-----------~hg~~~~vp~~s~~~v~----~--------~~~~------------- 177 (295)
+++++|+.+|++|++|+++++| +||+ +++|.|+..... + .++.
T Consensus 181 ~~~~la~~lgv~~~~v~~~v~GlNH~~w~~~v~~~G~-d~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~p~~ 259 (450)
T 1s6y_A 181 MRMGVAKLLGVDADRVHIDFAGLNHMVFGLHVYLDGV-EVTEKVIDLVAHPDRSGVTMKNIVDLGWEPDFLKGLKVLPCP 259 (450)
T ss_dssp HHHHHHHHHTSCGGGEEEEEEEETTEEEEEEEEETTE-ECHHHHHHHHSCC------------CCCCHHHHHHHCSBCCG
T ss_pred HHHHHHHHhCCCHHHcEEEEEeeecceeEEEeeeCCc-CchHhHHHHHhhhccccccccccccCccHHHHHHhcCCccch
Confidence 9999999999999999999999 9998 899999874331 1 0111
Q ss_pred --------HHHH-------------HHHHHHhhchhhhhh-----hhcc----CCCcchhhHHHHHHHHHHHHHcCcCCC
Q 022546 178 --------DEEI-------------KALTKRTQDGGTEVV-----EAKA----GKGSATLSMAYAGAVFADACLMGLNGV 227 (295)
Q Consensus 178 --------~~~~-------------~~i~~~v~~~~~~i~-----~~~~----~kg~~~~s~a~a~~~~i~ai~~~~~~~ 227 (295)
++.+ .++.+++++.+++++ ..+. ++| .+++|.+++++++||++|++
T Consensus 260 y~~yy~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ei~~~~~~~~k~~~~~~~~--~~~~~~~a~~ii~AI~~d~~-- 335 (450)
T 1s6y_A 260 YHRYYFQTDKMLAEELEAAKTKGTRAEVVQQLEKELFELYKDPNLAIKPPQLEKRG--GAYYSDAACSLISSIYNDKR-- 335 (450)
T ss_dssp GGHHHHSHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTTTCC-----------CC--SCCHHHHHHHHHHHHHHTCC--
T ss_pred hhhhhcCCHHHHHhhhccccccchHHHHHHHHHHHHHHHHhhhccccccchhhccc--chHHHHHHHHHHHHHHcCCC--
Confidence 2211 245667777888888 3221 123 34566999999999999975
Q ss_pred CceeEEE-EeeCCC---CCccEEEEeEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHHh
Q 022546 228 PDIVECT-FVQSSV---TELPFFASKVRLGKNGADEVLGLGPLSDYEKQGLESLKPELKASIEKGI 289 (295)
Q Consensus 228 ~~v~~~~-~~~g~~---~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~~~~ 289 (295)
.+++++ +++|+| |+|+++|+||+||++|+++++.. +|+++|+++++.++..-+-.++.++
T Consensus 336 -~~~~vsv~n~G~i~~lp~d~~vevP~vvg~~Gi~~i~~~-~L~~~e~~l~~~~~~~e~l~veAa~ 399 (450)
T 1s6y_A 336 -DIQPVNTRNNGAIASISAESAVEVNCVITKDGPKPIAVG-DLPVAVRGLVQQIKSFERVAAEAAV 399 (450)
T ss_dssp -CEEEEEEECTTSBTTSCTTSEEEEEEEEETTEEEECCCB-CCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -eEEEEEeecCceecCCCCCeEEEEeEEEcCCCeEEeecC-CCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 588887 679987 58999999999999999999887 9999999999999887766666554
No 41
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=100.00 E-value=4.2e-39 Score=293.74 Aligned_cols=269 Identities=24% Similarity=0.414 Sum_probs=232.3
Q ss_pred CCCCcCeEEEEeCCC--chhHHHhhhCCCC---CCeEEEeeCCCchhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHH
Q 022546 3 LDPLVSSLSLYDIAN--TPGVAADVSHINS---PAQVEGYAGEEQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGI 77 (295)
Q Consensus 3 ~~~~~~ei~L~D~~~--~~~~~~Dl~~~~~---~~~v~~~~~t~d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i 77 (295)
..+.+++++|+|+++ +.+.++|+.|... +.++.. +++ ++++++||+||++.+.++++|++|.+++.+|+++
T Consensus 28 ~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~---~~~-~~~~~~aD~Vii~v~~~~~~g~~r~~~~~~n~~~ 103 (319)
T 1lld_A 28 QRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDG---SDD-PEICRDADMVVITAGPRQKPGQSRLELVGATVNI 103 (319)
T ss_dssp HTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEE---ESC-GGGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHH
T ss_pred hCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEe---CCC-HHHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHH
Confidence 356678999999986 5667888776531 224432 234 4789999999999999999999999999999999
Q ss_pred HHHHHHHHHhhCCCeEEEEecCCccchHHHHHHHHHHhCCCCCCCeeec-chhhHHHHHHHHHhhcCCCCccceEEEeeC
Q 022546 78 VKSLCTAIANYCPHALVNMISNPVNSTVPIAAEVFKKAGTYDEKKLFGV-TTLDVVRAKTFYAGKVNVPVAEVNVPVIGG 156 (295)
Q Consensus 78 ~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~k~sg~~~~~kviG~-t~ld~~R~~~~la~~l~v~~~~v~~~viG~ 156 (295)
++++++.|++++|++++++++||++.+++++ ++.++ +|++||+|. |.+|+.|++..+++++++++.+++.++||+
T Consensus 104 ~~~~~~~i~~~~~~~~vi~~~Np~~~~~~~~---~~~~~-~~~~~vig~~~~l~~~r~~~~~a~~~~v~~~~v~~~~~G~ 179 (319)
T 1lld_A 104 LKAIMPNLVKVAPNAIYMLITNPVDIATHVA---QKLTG-LPENQIFGSGTNLDSARLRFLIAQQTGVNVKNVHAYIAGE 179 (319)
T ss_dssp HHHHHHHHHHHCTTSEEEECCSSHHHHHHHH---HHHHT-CCTTSEEECTTHHHHHHHHHHHHHHHTCCGGGEECCEEBS
T ss_pred HHHHHHHHHHhCCCceEEEecCchHHHHHHH---HHhcC-CCHHHEeeccccHhHHHHHHHHHHHhCCCHHHeEEEEEeC
Confidence 9999999999999999999999999999876 66777 999999999 999999999999999999999999999999
Q ss_pred CCCceeeeccccCcCCCC----------C--CCHHHHHHHHHHhhchhhhhhhhccCCCcchhhHHHHHHHHHHHHHcCc
Q 022546 157 HAGVTILPLFSQATPKSN----------N--LSDEEIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAVFADACLMGL 224 (295)
Q Consensus 157 hg~~~~vp~~s~~~v~~~----------~--~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~s~a~a~~~~i~ai~~~~ 224 (295)
||+ +++|+|+++.+++. . .+++.+.++.+++++.++++++ .+|.+.+++|.+.++|+++|++|.
T Consensus 180 ~g~-~~~~~w~k~~in~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~e~~~v~~---~~G~~~~~~a~~~~sm~~di~~~~ 255 (319)
T 1lld_A 180 HGD-SEVPLWESATIGGVPMSDWTPLPGHDPLDADKREEIHQEVKNAAYKIIN---GKGATNYAIGMSGVDIIEAVLHDT 255 (319)
T ss_dssp SST-TCEECTTSCEETTEEGGGCCCCTTCCCCCHHHHHHHHHHHHHHHHHHHT---SCCSCCHHHHHHHHHHHHHHHTTC
T ss_pred CCC-ceeeeeecceECCccHHHHHhccccccCCHHHHHHHHHHHHHhhHhhhh---CCCCchHHHHHHHHHHHHHHHcCC
Confidence 998 89999999876531 1 2334478888999999999988 457888999999999999999986
Q ss_pred CCCCceeEEE-EeeCCC-CCccEEEEeEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 022546 225 NGVPDIVECT-FVQSSV-TELPFFASKVRLGKNGADEVLGLGPLSDYEKQGLESLKPELKASIEK 287 (295)
Q Consensus 225 ~~~~~v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~~ 287 (295)
+ .+++++ +++|.| ..+.++|+||.++++|+++++++ +|+++|+++|++|++.|++.++.
T Consensus 256 ~---~ei~~s~~~~G~~~~~~~~~gvp~~~~~~Gv~~i~~~-~l~~~e~~~l~~s~~~l~~~~~~ 316 (319)
T 1lld_A 256 N---RILPVSSMLKDFHGISDICMSVPTLLNRQGVNNTINT-PVSDKELAALKRSAETLKETAAQ 316 (319)
T ss_dssp C---EEEEEEEECSSBTTBCSSEEEEEEEEETTEEECCSCC-CCCHHHHHHHHHHHHHHHHHHHT
T ss_pred C---cEEEEEEEecCcCCccceEEEEEEEEeCCeeEEEcCC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence 4 466776 889988 67899999999999999999997 99999999999999999998875
No 42
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=100.00 E-value=6.5e-40 Score=312.39 Aligned_cols=268 Identities=13% Similarity=0.136 Sum_probs=203.4
Q ss_pred CC-cCeEEEEeCCC--chhHHHhhhCC-----CCCCeEEEeeCCCchhhhcCCCcEEEEcCCCCCCCCCCH---------
Q 022546 5 PL-VSSLSLYDIAN--TPGVAADVSHI-----NSPAQVEGYAGEEQLGKALEGSDVVIIPAGVPRKPGMTR--------- 67 (295)
Q Consensus 5 ~~-~~ei~L~D~~~--~~~~~~Dl~~~-----~~~~~v~~~~~t~d~~~al~daDiVvi~~g~~~~~g~~r--------- 67 (295)
++ .+||+|+|+++ +++ ..|+.+. ..+.+++. |+|+++|++|||+||++++.++++|++|
T Consensus 54 ~l~~~eV~L~Di~~e~~~~-~~~~~~~~l~~~~~~~~I~~---t~D~~eal~~AD~VViaag~~~~~g~~rd~~ip~k~g 129 (472)
T 1u8x_X 54 EFPIRKLKLYDNDKERQDR-IAGACDVFIREKAPDIEFAA---TTDPEEAFTDVDFVMAHIRVGKYAMRALDEQIPLKYG 129 (472)
T ss_dssp TSCEEEEEEECSCHHHHHH-HHHHHHHHHHHHCTTSEEEE---ESCHHHHHSSCSEEEECCCTTHHHHHHHHHHHHHTTT
T ss_pred CCCCCEEEEEeCCHHHHHH-HHHHHHHHhccCCCCCEEEE---ECCHHHHHcCCCEEEEcCCCccccccchhhhhhhhcC
Confidence 66 89999999987 444 3465543 23456664 3577899999999999999987777777
Q ss_pred -----------HHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCccchHHHHHHHHHHhCCCCCCCeeecchhhHHHHHH
Q 022546 68 -----------DDLFNINAGIVKSLCTAIANYCPHALVNMISNPVNSTVPIAAEVFKKAGTYDEKKLFGVTTLDVVRAKT 136 (295)
Q Consensus 68 -----------~~~~~~n~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~k~sg~~~~~kviG~t~ld~~R~~~ 136 (295)
++++.+|+++++++++.|+++||+||+|++|||+|++|+++ +|.+ |++||||+|.+. .|+++
T Consensus 130 ~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~P~A~ii~~TNPvdi~T~~~---~k~~---p~~rViG~c~~~-~r~~~ 202 (472)
T 1u8x_X 130 VVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNYSNPAAIVAEAT---RRLR---PNSKILNICDMP-VGIED 202 (472)
T ss_dssp CCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSCHHHHHHHH---HHHS---TTCCEEECCSHH-HHHHH
T ss_pred cccccccCchhHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHHH---HHhC---CCCCEEEeCCcH-HHHHH
Confidence 55589999999999999999999999999999999999986 6664 678999997654 49999
Q ss_pred HHHhhcCCCC-ccceEEEee-----------C-CCCceeeeccccCcC-CC-----------CCCCHHH-----------
Q 022546 137 FYAGKVNVPV-AEVNVPVIG-----------G-HAGVTILPLFSQATP-KS-----------NNLSDEE----------- 180 (295)
Q Consensus 137 ~la~~l~v~~-~~v~~~viG-----------~-hg~~~~vp~~s~~~v-~~-----------~~~~~~~----------- 180 (295)
++|+.||++| ++|+++++| + ||+ +++|.||...+ .+ .++..+-
T Consensus 203 ~la~~lgv~~~~~v~~~v~GlNH~~W~~~~~~~hG~-d~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (472)
T 1u8x_X 203 RMAQILGLSSRKEMKVRYYGLNHFGWWTSIQDQEGN-DLMPKLKEHVSQYGYIPKTEAEAVEASWNDTFAKARDVQAADP 281 (472)
T ss_dssp HHHHHHTCSCGGGEEEEEEEETTEEEEEEEEETTCC-BCHHHHHHHHHHHSSCCCC-------CTTSHHHHHHHHHHTST
T ss_pred HHHHHhCcCchhceeEEEeccchhhheeeeEeCCCC-EehHhHHHHHHhcCCCccccccccccchHHHHHhhcCcccccc
Confidence 9999999998 999999999 8 998 89999987432 00 0111000
Q ss_pred ---------H----HHHHH----------Hhhc-hhhhhhhhc-cC--CC---cchh---hHHHHHHHHHHHHHcCcCCC
Q 022546 181 ---------I----KALTK----------RTQD-GGTEVVEAK-AG--KG---SATL---SMAYAGAVFADACLMGLNGV 227 (295)
Q Consensus 181 ---------~----~~i~~----------~v~~-~~~~i~~~~-~~--kg---~~~~---s~a~a~~~~i~ai~~~~~~~ 227 (295)
+ +++.+ ++++ .+.++++.. .+ +| ++.| ++|.+++++++||++|++
T Consensus 282 e~~p~~Yl~yy~~~~~~~e~~~~~~~r~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~AI~~d~~-- 359 (472)
T 1u8x_X 282 DTLPNTYLQYYLFPDDMVKKSNPNHTRANEVMEGREAFIFSQCDMITREQSSENSEIKIDDHASYIVDLARAIAYNTG-- 359 (472)
T ss_dssp TSEECGGGHHHHSHHHHHTTSCSSSCHHHHHHHHTTTTTTTTHHHHHHHTSCCSCSSCCCTTTHHHHHHHHHHHHTCC--
T ss_pred ccCCccchhcccCCHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhcCCcccccccccHHHHHHHHHHHHHhcCCC--
Confidence 0 11111 1222 222222210 02 33 4445 899999999999999975
Q ss_pred CceeEEE-EeeCCC---CCccEEEEeEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 022546 228 PDIVECT-FVQSSV---TELPFFASKVRLGKNGADEVLGLGPLSDYEKQGLESLKPELKASIEKG 288 (295)
Q Consensus 228 ~~v~~~~-~~~g~~---~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~~~ 288 (295)
.+++++ +++|.| |+|+++|+||+||++|++++... +|+++|+++++.-...-+-.++.+
T Consensus 360 -~v~~vsv~n~G~i~glp~d~~veVP~vvg~~Gi~pi~~~-~Lp~~~~~l~~~~~~~e~l~veAa 422 (472)
T 1u8x_X 360 -ERMLLIVENNGAIANFDPTAMVEVPCIVGSNGPEPITVG-TIPQFQKGLMEQQVSVEKLTVEAW 422 (472)
T ss_dssp -EEEEEEEECTTSBTTSCTTSEEEEEEEEETTEEEECCCB-CCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred -eEEEEEeecCceecCcCCCeEEEEeEEEcCCCceEeecC-CCCHHHHHHHHHHHHHHHHHHHHH
Confidence 588887 679986 58999999999999999999887 999999999988766555555544
No 43
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=99.97 E-value=1.1e-30 Score=247.02 Aligned_cols=262 Identities=19% Similarity=0.174 Sum_probs=180.7
Q ss_pred cCeEEEEeCCC--c--hhHHHhhhCCCCCCeEEEeeCCCchhhhcCCCcEEEEcCC------------CCCCCCCCH---
Q 022546 7 VSSLSLYDIAN--T--PGVAADVSHINSPAQVEGYAGEEQLGKALEGSDVVIIPAG------------VPRKPGMTR--- 67 (295)
Q Consensus 7 ~~ei~L~D~~~--~--~~~~~Dl~~~~~~~~v~~~~~t~d~~~al~daDiVvi~~g------------~~~~~g~~r--- 67 (295)
.++|+|+|+++ + .+...+.... .+.+++ .|+|+++|++|||+||++.. .|+|+|+.|
T Consensus 33 ~geV~L~Di~~e~le~~~~~~~~l~~-~~~~I~---~TtD~~eAl~dADfVI~airvG~~~~~~~De~ip~k~G~~~~vg 108 (450)
T 3fef_A 33 SGTVALYDLDFEAAQKNEVIGNHSGN-GRWRYE---AVSTLKKALSAADIVIISILPGSLDDMEVDVHLPERCGIYQSVG 108 (450)
T ss_dssp CEEEEEECSSHHHHHHHHHHHTTSTT-SCEEEE---EESSHHHHHTTCSEEEECCCSSCHHHHHHHHHGGGGGTCCCSSC
T ss_pred CCeEEEEeCCHHHHHHHHHHHHHHhc-cCCeEE---EECCHHHHhcCCCEEEeccccCCcccchhhhhhhhccCccccch
Confidence 45999999986 2 1233332222 233444 35688899999999999875 578888744
Q ss_pred -------HHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCccchHHHHHHHHHHhCCCCCCCeeecchhhHHHHHHHHHh
Q 022546 68 -------DDLFNINAGIVKSLCTAIANYCPHALVNMISNPVNSTVPIAAEVFKKAGTYDEKKLFGVTTLDVVRAKTFYAG 140 (295)
Q Consensus 68 -------~~~~~~n~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~k~sg~~~~~kviG~t~ld~~R~~~~la~ 140 (295)
...+.+|+++++++++.|+++||+||+|++|||+|++|+++ +|. +|+.||||+|... .++++.+|+
T Consensus 109 et~g~GGi~~alr~~~i~~~i~~~i~~~~p~a~~i~~tNPvdi~t~~~---~k~---~p~~rviG~C~~~-~~~~~~~a~ 181 (450)
T 3fef_A 109 DTVGPGGIIRGLRAVPIFAEIARAIRDYAPESWVINYTNPMSVCTRVL---YKV---FPGIKAIGCCHEV-FGTQKLLAE 181 (450)
T ss_dssp SSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHHHHHHHH---HHH---CTTCEEEECCSHH-HHHHHHHHH
T ss_pred hhcCCchhhcccccHHHHHHHHHHHHHHCCCeEEEEecCchHHHHHHH---HHH---CCCCCEEEeCCcH-HHHHHHHHH
Confidence 57788999999999999999999999999999999999986 565 6789999999875 799999999
Q ss_pred hc----C---CCCccceEEEee-CCCCceeeeccccCcCCCCCCCHHH------------------------------HH
Q 022546 141 KV----N---VPVAEVNVPVIG-GHAGVTILPLFSQATPKSNNLSDEE------------------------------IK 182 (295)
Q Consensus 141 ~l----~---v~~~~v~~~viG-~hg~~~~vp~~s~~~v~~~~~~~~~------------------------------~~ 182 (295)
.| | +++++|+..+.| ||.. .|++.+..+.++.+.- .-
T Consensus 182 ~l~~~lg~~~~~~~~v~~~~~GlNH~~-----w~~~~~~~G~d~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (450)
T 3fef_A 182 MVTERLGIEVPRREDIRVNVLGINHFT-----WITKASYRHIDLLPIFREFSAHYGESGYELEGECWRDSVFCSAHRVAF 256 (450)
T ss_dssp HHHHHHCCCCSCGGGEEEEEEEETTEE-----EEEEEEETTEEHHHHHHHHHHHHTTTCCCCTTCCTTSCTTCCCSHHHH
T ss_pred HHHhhcCCCCCChhHeEEEEeeecCeE-----eEEEEEECCEEChHHHHHHHHhhcccccccccccccccccchhhHHHH
Confidence 99 5 779999999999 8843 2333322221000000 00
Q ss_pred HHHHH----------------------------------------hhchhhhhhhhccC-CCcchhhHHHHHHHHHHHHH
Q 022546 183 ALTKR----------------------------------------TQDGGTEVVEAKAG-KGSATLSMAYAGAVFADACL 221 (295)
Q Consensus 183 ~i~~~----------------------------------------v~~~~~~i~~~~~~-kg~~~~s~a~a~~~~i~ai~ 221 (295)
++.+. +.+...+..+...+ +.-..-..+.+++++++||+
T Consensus 257 ~~~~~~g~~p~~~~~h~~ey~p~~Y~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ii~aI~ 336 (450)
T 3fef_A 257 DLFETYGAIPAAGDRHLAEFLPGPYLKQPEVWKFHLTPISFRKQDRAEKRQETERLIVQQRGVAEKASGEEGVNIIAALL 336 (450)
T ss_dssp HHHHHHSSEECSCHHHHTTSSCSSGGGCTTTTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCSCCHHHHHHHHT
T ss_pred HHHHHcCCcccccccchhcccchhhcCCHHHhcccccchhhHHHHHHHHHHHHHHHhcCCcCcCcCccHHHHHHHHHHHH
Confidence 00000 00000000000000 00000001256789999999
Q ss_pred cCcCCCCceeEEE-EeeCCC---CCccEEEEeEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 022546 222 MGLNGVPDIVECT-FVQSSV---TELPFFASKVRLGKNGADEVLGLGPLSDYEKQGLESLKPELKASIEKG 288 (295)
Q Consensus 222 ~~~~~~~~v~~~~-~~~g~~---~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~~~ 288 (295)
+|++ .+++++ .++|.| |+|+++|+||++|++|+.++... +|++.++++++.-...-+-.++.+
T Consensus 337 ~d~~---~~~~vnv~n~G~i~~lp~d~~vevP~~v~~~Gi~pi~~g-~Lp~~~~~l~~~~~~~e~l~veAa 403 (450)
T 3fef_A 337 GLGE---LVTNVNMPNQGQVLNLPIQAIVETNAFITRNRVQPILSG-ALPKGVEMLAARHISNQEAVADAG 403 (450)
T ss_dssp TSCC---EEEEEEEECSSSSTTSCTTSEEEEEEEEETTEEEEBCCC-CCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCC---eEEEEEeecCcEecCCCCCeEEEEEEEEcCCCceecccC-CCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9975 578887 678986 68999999999999999998764 999999999887665555445544
No 44
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=99.96 E-value=1e-27 Score=228.34 Aligned_cols=265 Identities=17% Similarity=0.112 Sum_probs=177.3
Q ss_pred cCeEEEEeCCC--chhHHHhhhC-----CCCCCeEEEeeCCCchhhhcCCCcEEEEcCCC------------CCCCCCCH
Q 022546 7 VSSLSLYDIAN--TPGVAADVSH-----INSPAQVEGYAGEEQLGKALEGSDVVIIPAGV------------PRKPGMTR 67 (295)
Q Consensus 7 ~~ei~L~D~~~--~~~~~~Dl~~-----~~~~~~v~~~~~t~d~~~al~daDiVvi~~g~------------~~~~g~~r 67 (295)
..||+|+|+++ +++ +.++.+ ...+.+++. |+|+++|++|||+||++++. |+|+|+.|
T Consensus 32 ~~eV~L~Di~~e~l~~-~~~~~~~~l~~~~~~~~I~~---ttD~~eal~dAD~VIiaagv~~~~~~~~dE~ip~K~g~~~ 107 (480)
T 1obb_A 32 GSTVTLMDIDEERLDA-ILTIAKKYVEEVGADLKFEK---TMNLDDVIIDADFVINTAMVGGHTYLEKVRQIGEKYGYYR 107 (480)
T ss_dssp TCEEEEECSCHHHHHH-HHHHHHHHHHHTTCCCEEEE---ESCHHHHHTTCSEEEECCCTTHHHHHHHHHHHHHHTTCTT
T ss_pred CCEEEEEeCCHHHHHH-HHHHHHHHhccCCCCcEEEE---ECCHHHHhCCCCEEEECCCccccccccccccccccccccc
Confidence 78999999987 333 333322 223445654 35777999999999999986 44556544
Q ss_pred --------------HHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCccchHHHHHHHHHHhCCCCCCCeeecchhhHHH
Q 022546 68 --------------DDLFNINAGIVKSLCTAIANYCPHALVNMISNPVNSTVPIAAEVFKKAGTYDEKKLFGVTTLDVVR 133 (295)
Q Consensus 68 --------------~~~~~~n~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~k~sg~~~~~kviG~t~ld~~R 133 (295)
..++.+|+++++++++.|+++||+||+|++|||+|++|+++ +| +|++||||+|.++. +
T Consensus 108 ~l~dt~g~g~~~~G~~~~~rni~i~~~i~~~i~~~~P~A~ii~~TNPvdi~t~~~---~k----~p~~rviG~c~~~~-~ 179 (480)
T 1obb_A 108 GIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWYLQAANPIFEGTTLV---TR----TVPIKAVGFCHGHY-G 179 (480)
T ss_dssp CTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEEEECSSCHHHHHHHH---HH----HSCSEEEEECSGGG-H
T ss_pred chhhhcCCccchhhhHHhhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHHH---HH----CCCCcEEecCCCHH-H
Confidence 34689999999999999999999999999999999999986 56 67899999964443 4
Q ss_pred HHHHHHhhcCCCCccceEEEee-CCCC---------ceeee-----------------cccc--CcCC-------C----
Q 022546 134 AKTFYAGKVNVPVAEVNVPVIG-GHAG---------VTILP-----------------LFSQ--ATPK-------S---- 173 (295)
Q Consensus 134 ~~~~la~~l~v~~~~v~~~viG-~hg~---------~~~vp-----------------~~s~--~~v~-------~---- 173 (295)
+++++ +.+|++|++|+++|+| ||.. ++.+| .|+. ..+. +
T Consensus 180 ~~~~l-~~lgv~~~~v~~~v~GlNH~~w~~~~~~~G~D~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~p~ 258 (480)
T 1obb_A 180 VMEIV-EKLGLEEEKVDWQVAGVNHGIWLNRFRYNGGNAYPLLDKWIEEKSKDWKPENPFNDQLSPAAIDMYRFYGVMPI 258 (480)
T ss_dssp HHHHH-HHTTCCGGGEEEEEEEETTEEEEEEEEETTEECHHHHHHHHHHTGGGCCCSSTTCCTTSHHHHHHHHHHSSCEE
T ss_pred HHHHH-HHhCCCHHHceEEEEeecchhhhhheeeCCeEcHHHHHHHHHccCccccccccccchhhhHHHHHHHhcCCeec
Confidence 78999 9999999999999999 5543 01111 1321 0000 0
Q ss_pred -------CCC------C------------HH-----H----HHHHHHHhhchhhhhhhhccCCC--------cchh----
Q 022546 174 -------NNL------S------------DE-----E----IKALTKRTQDGGTEVVEAKAGKG--------SATL---- 207 (295)
Q Consensus 174 -------~~~------~------------~~-----~----~~~i~~~v~~~~~~i~~~~~~kg--------~~~~---- 207 (295)
++. + .+ + +.+......+.-+++.+...-++ .++|
T Consensus 259 ~~~~h~~~y~~~~~~~~~~yyy~~~~~~~~~~~~~~~~~~~~~e~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (480)
T 1obb_A 259 GDTVRNSSWRYHRDLETKKKWYGEPWGGADSEIGWKWYQDTLGKVTEITKKVAKFIKENPSVRLSDLGSVLGKDLSEKQF 338 (480)
T ss_dssp GGGTTSCCGGGGSSHHHHHHHHCTTTTSTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCSSSSCCSHHHHHH
T ss_pred CCCCCCcCcccccccCccccccchhhcccccccccHhHHHHHHHHHHHHHHHHHHHhcCCcccccccccccccccccccc
Confidence 111 0 00 0 11111111112222222110001 0111
Q ss_pred ------------hHHHHHHHHHHHHHcCcCCCCceeEEE-EeeCCC---CCccEEEEeEEEcCCceEEEccCCC-CCHHH
Q 022546 208 ------------SMAYAGAVFADACLMGLNGVPDIVECT-FVQSSV---TELPFFASKVRLGKNGADEVLGLGP-LSDYE 270 (295)
Q Consensus 208 ------------s~a~a~~~~i~ai~~~~~~~~~v~~~~-~~~g~~---~~~~~~s~Pv~ig~~Gv~~v~~~~~-L~~~E 270 (295)
..+..++++++||++|++ .++.++ .++|.+ |+|.++++||+++++|+.++.- ++ |++..
T Consensus 339 ~~~~~~~~~~~~~~ge~a~~ii~ai~~~~~---~~~~vnv~N~G~I~~lp~d~vVEvp~~v~~~G~~p~~~-g~~lP~~~ 414 (480)
T 1obb_A 339 VLEVEKILDPERKSGEQHIPFIDALLNDNK---ARFVVNIPNKGIIHGIDDDVVVEVPALVDKNGIHPEKI-EPPLPDRV 414 (480)
T ss_dssp HHHHHHHHCTTCCCSCSHHHHHHHHHHCCC---EEEEEEEECTTSSTTSCTTSEEEEEEEEETTEEEECCC-SSCCCHHH
T ss_pred ccccccccccchhhhHHHHHHHHHHHhCCC---eEEEEEeeCCceeCCCCCCeEEEEEEEEcCCCCEeecc-CCCCCHHH
Confidence 112667899999999975 466666 568864 7899999999999999999754 58 99999
Q ss_pred HHH-HHHHHHHHHHHHHHH
Q 022546 271 KQG-LESLKPELKASIEKG 288 (295)
Q Consensus 271 ~~~-l~~s~~~l~~~~~~~ 288 (295)
+++ ++.-...-+-.++.+
T Consensus 415 ~~l~~~~~~~~e~l~veA~ 433 (480)
T 1obb_A 415 VKYYLRPRIMRMEMALEAF 433 (480)
T ss_dssp HHHTHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHHH
Confidence 999 776655544444444
No 45
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=99.95 E-value=1.1e-27 Score=228.87 Aligned_cols=251 Identities=16% Similarity=0.103 Sum_probs=169.3
Q ss_pred CCcCeEEEEeCCC--chhHHHhhhCCC----CCCeEEEeeCCCchhhhcCCCcEEEEcCCC-------------------
Q 022546 5 PLVSSLSLYDIAN--TPGVAADVSHIN----SPAQVEGYAGEEQLGKALEGSDVVIIPAGV------------------- 59 (295)
Q Consensus 5 ~~~~ei~L~D~~~--~~~~~~Dl~~~~----~~~~v~~~~~t~d~~~al~daDiVvi~~g~------------------- 59 (295)
+..+||+|+|+++ +.+...++++.. .+.+++. |+|+++||+||||||+++|.
T Consensus 29 ~~~~ei~L~Di~~~rl~~~~~~~~~~~~~~~~~~~i~~---t~d~~eAl~gAD~Vi~~~g~~~~Rvg~~~~r~~de~~~i 105 (477)
T 3u95_A 29 REDTHIYLMDVHERRLNASYILARKYVEELNSPVKVVK---TESLDEAIEGADFIINTAYPYDPRYHDSGSQRWDEVTKV 105 (477)
T ss_dssp STTCEEEEECSCHHHHHHHHHHHHHHHHHHTCCCEEEE---ESCHHHHHTTCSEEEECCCCCCTTTCSSHHHHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHHHHHHcCCCeEEEE---eCCHHHHhCCCCEEEECcccccccccccccccceeeecc
Confidence 3468999999987 567777777652 2345553 46889999999999999864
Q ss_pred CCCCCCCHHHH---------------HHHHHHHHHHHHHHHHhhCCCeEEEEecCCccchHHHHHHHHHHhCCCCCCCee
Q 022546 60 PRKPGMTRDDL---------------FNINAGIVKSLCTAIANYCPHALVNMISNPVNSTVPIAAEVFKKAGTYDEKKLF 124 (295)
Q Consensus 60 ~~~~g~~r~~~---------------~~~n~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~k~sg~~~~~kvi 124 (295)
|+|+|++|..+ ..+|++++.++++.|+++|||||+||+|||++++|+++ +|++| .|++
T Consensus 106 p~k~G~~~~~l~qet~g~gG~~~~lR~~~~i~v~~~i~~~i~~~~P~A~~in~tNP~~i~t~a~---~~~~~----~k~v 178 (477)
T 3u95_A 106 GEKHGYYRGIDSQELNMVSTYTYVLSSYPDVKLALEIAEKMKKMAPKAYLMQTANPVFEITQAV---RRWTG----ANII 178 (477)
T ss_dssp HHHTTCTTCTTCBTTBCCTTSCSTTTTHHHHHHHHHHHHHHHHHCTTCEEEECSSCHHHHHHHH---HHHHC----CCEE
T ss_pred CcccceeecccccccCCccchhHHHhhhhhHHHHHHHHHHHHhhCCCeEEEEecChHHHHHHHH---HHhCC----CCeE
Confidence 23666665443 24799999999999999999999999999999999987 78776 5899
Q ss_pred ecchhhHHHHHHHHHhhcCCCCccceEEEeeCCCCceeeeccccCcC---------------------------------
Q 022546 125 GVTTLDVVRAKTFYAGKVNVPVAEVNVPVIGGHAGVTILPLFSQATP--------------------------------- 171 (295)
Q Consensus 125 G~t~ld~~R~~~~la~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v--------------------------------- 171 (295)
|+|.... ....+++.||+++++|+..+.|-++. +-+..|+....
T Consensus 179 GlC~~~~--~~~~~~~~Lg~~~~~v~~~~~GlNH~-~w~~~~~~~G~D~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~d 255 (477)
T 3u95_A 179 GFCHGVA--GVYEVFERLGLDPEEVDWQVAGVNHG-IWLNRFRYRGKDAYPLLDEWIEKELSKWEPKNPWDTQMSPAAMD 255 (477)
T ss_dssp EECCGGG--HHHHHHHHTTCCGGGEEEEEEEETTE-EEEEEEEETTEECHHHHHHHHHHHTTTCCCSSTTCCTTSHHHHH
T ss_pred EECCCHH--HHHHHHHHhCCCHHHcEEEEeecCCC-eeeeeeeecCCcccHHHHHHHHhhcccccccCccccccchHHHH
Confidence 9996543 33557788999999999999994444 33332221100
Q ss_pred -----C---------CC----CCCHH----------------HHHHHHHHhhchh-------hhhhhh--------c--c
Q 022546 172 -----K---------SN----NLSDE----------------EIKALTKRTQDGG-------TEVVEA--------K--A 200 (295)
Q Consensus 172 -----~---------~~----~~~~~----------------~~~~i~~~v~~~~-------~~i~~~--------~--~ 200 (295)
+ .. .+..+ ++..+.+.++... .++.+. . .
T Consensus 256 ~~r~~g~~p~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (477)
T 3u95_A 256 MYRFYGMLPIGDTVRNGTWKYHYNLETKKKWFRRFGGIDNEVERPKFHEHLRRARERLIKLAEEVQENPHLKITEKHPEI 335 (477)
T ss_dssp HHHHHSSCEEGGGGTSCCGGGTSSHHHHHHHHCTTCCSSSTTHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCHHHHCTTT
T ss_pred HHHHhCCcccccccccccchhhhhHHHHHHHHHHhcccchhhhhhhHHHHHHHHHHHHHHHHHHHhhccchhcccccchh
Confidence 0 00 00000 0000111111111 111100 0 0
Q ss_pred CCCcchhhHHHHHHHHHHHHHcCcCCCCceeEEE-EeeCCC---CCccEEEEeEEEcCCceEEEccCCCCCHHHHHHH
Q 022546 201 GKGSATLSMAYAGAVFADACLMGLNGVPDIVECT-FVQSSV---TELPFFASKVRLGKNGADEVLGLGPLSDYEKQGL 274 (295)
Q Consensus 201 ~kg~~~~s~a~a~~~~i~ai~~~~~~~~~v~~~~-~~~g~~---~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l 274 (295)
..++..+| .+++++|+||++|++ .++.++ .++|.+ |+|.++++||+|+++|+.++ ..+++.....+++
T Consensus 336 ~~~~~~~~--e~a~~ii~AI~~~~~---~~~~vNv~N~G~I~nLP~DavVEVpc~Vd~~Gi~P~-~vg~~p~~~~~l~ 407 (477)
T 3u95_A 336 FPKGRLSG--EQHIPFINAIANNKR---VRLFLNVENQGALKDFPDDLVMELPVWVDSSGIHRE-KVEPDLTHRIKIF 407 (477)
T ss_dssp SCSSCCCC--CSHHHHHHHHHHCCC---EEEEEEEECTTSSTTSCTTSEEEEEEEEETTEEEEC-CCCSCCCHHHHHH
T ss_pred cccccccH--HHHHHHHHHHhCCCC---eEEEEEeecCcccCCCCCCcEEEEEEEEcCCCcccc-cCCCCCHHHHHHH
Confidence 01122344 677899999999975 466666 568875 78999999999999999986 4557877776664
No 46
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=83.19 E-value=4.9 Score=37.83 Aligned_cols=92 Identities=12% Similarity=0.052 Sum_probs=52.3
Q ss_pred eEEEEeCCC--chhHHHhhhCCCC------------------CCeEEEeeCCCchhhhcCCCcEEEEcCCCCCCCCCCHH
Q 022546 9 SLSLYDIAN--TPGVAADVSHINS------------------PAQVEGYAGEEQLGKALEGSDVVIIPAGVPRKPGMTRD 68 (295)
Q Consensus 9 ei~L~D~~~--~~~~~~Dl~~~~~------------------~~~v~~~~~t~d~~~al~daDiVvi~~g~~~~~g~~r~ 68 (295)
+++++|+++ ..+.+..++.... ..+++. |+| .+++++||+||++.+.|...+.++
T Consensus 45 ~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~---ttd-~ea~~~aDvViiaVptp~~~~~~~- 119 (478)
T 3g79_A 45 KVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFEC---TPD-FSRISELDAVTLAIQTPFANPKDL- 119 (478)
T ss_dssp EEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEE---ESC-GGGGGGCSEEEECCCCCCCSSCCS-
T ss_pred eEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEE---eCc-HHHHhcCCEEEEecCCchhccCCc-
Confidence 899999986 3446666665321 123443 345 589999999999887765433221
Q ss_pred HHHHHHHHHHHHHHHHHHhhC-CCeEEEEe-cCCccchHHHH
Q 022546 69 DLFNINAGIVKSLCTAIANYC-PHALVNMI-SNPVNSTVPIA 108 (295)
Q Consensus 69 ~~~~~n~~i~~~i~~~i~~~~-p~a~viv~-tNP~d~~t~~~ 108 (295)
..+...++..++.|.++. |..+|+.- |-|.+..-.++
T Consensus 120 ---~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~pgtt~~v~ 158 (478)
T 3g79_A 120 ---EPDFSALIDGIRNVGKYLKPGMLVVLESTITPGTTEGMA 158 (478)
T ss_dssp ---SCCCHHHHHHHHHHHHHCCTTCEEEECSCCCTTTTTTHH
T ss_pred ---cccHHHHHHHHHHHHhhcCCCcEEEEeCCCChHHHHHHH
Confidence 112333444455555554 44544443 55655554443
No 47
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=77.23 E-value=9.7 Score=34.16 Aligned_cols=77 Identities=12% Similarity=0.143 Sum_probs=47.5
Q ss_pred CeEEEEeCCC--chhHHHhhh------CCCCCCeEEEeeCCCchhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHH
Q 022546 8 SSLSLYDIAN--TPGVAADVS------HINSPAQVEGYAGEEQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVK 79 (295)
Q Consensus 8 ~ei~L~D~~~--~~~~~~Dl~------~~~~~~~v~~~~~t~d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~ 79 (295)
.+++++|.++ .+.....-. ....+..+.. ++|+.+++++||+||++.. ...++
T Consensus 53 ~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~---t~d~~ea~~~aDvVilaVp----------------~~~~~ 113 (356)
T 3k96_A 53 QKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKA---YCDLKASLEGVTDILIVVP----------------SFAFH 113 (356)
T ss_dssp CCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEE---ESCHHHHHTTCCEEEECCC----------------HHHHH
T ss_pred CeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEE---ECCHHHHHhcCCEEEECCC----------------HHHHH
Confidence 4789999875 222111110 0111223444 2467789999999999742 12466
Q ss_pred HHHHHHHhhC-CCeEEEEecCCccc
Q 022546 80 SLCTAIANYC-PHALVNMISNPVNS 103 (295)
Q Consensus 80 ~i~~~i~~~~-p~a~viv~tNP~d~ 103 (295)
++++.+..+- |+.+++.++|-.+.
T Consensus 114 ~vl~~i~~~l~~~~ivvs~~kGi~~ 138 (356)
T 3k96_A 114 EVITRMKPLIDAKTRIAWGTKGLAK 138 (356)
T ss_dssp HHHHHHGGGCCTTCEEEECCCSCBT
T ss_pred HHHHHHHHhcCCCCEEEEEeCCCCc
Confidence 7777777765 67888988887654
No 48
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=76.34 E-value=10 Score=35.26 Aligned_cols=60 Identities=20% Similarity=0.250 Sum_probs=36.0
Q ss_pred CchhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEec-CCccchHH
Q 022546 41 EQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIANYC-PHALVNMIS-NPVNSTVP 106 (295)
Q Consensus 41 ~d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~-p~a~viv~t-NP~d~~t~ 106 (295)
+|+.+++++||+||++.+.+...+. .-+...++++++.+.++- ++.+|+..| -|.+..-.
T Consensus 70 ~d~~ea~~~aDvViiaVptp~~~~~------~~dl~~v~~v~~~i~~~l~~g~iVV~~STv~pgt~~~ 131 (450)
T 3gg2_A 70 TEIEQAVPEADIIFIAVGTPAGEDG------SADMSYVLDAARSIGRAMSRYILIVTKSTVPVGSYRL 131 (450)
T ss_dssp SCHHHHGGGCSEEEECCCCCBCTTS------SBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHH
T ss_pred CCHHHHHhcCCEEEEEcCCCcccCC------CcChHHHHHHHHHHHhhCCCCCEEEEeeeCCCcchHH
Confidence 5677889999999998876654332 122345555556666654 455555543 35544333
No 49
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=76.00 E-value=1.9 Score=40.64 Aligned_cols=67 Identities=22% Similarity=0.308 Sum_probs=39.1
Q ss_pred CchhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEe-cCCccchHHHH
Q 022546 41 EQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIANYC-PHALVNMI-SNPVNSTVPIA 108 (295)
Q Consensus 41 ~d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~-p~a~viv~-tNP~d~~t~~~ 108 (295)
+|+.+++++||+||++.+.|...+.++.+ -.-+...+.+.++.|.++. |+.+|+.. |+|.+..-.+.
T Consensus 78 ~~~~~~~~~aDvvii~Vptp~~~~g~~~~-~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~gt~~~l~ 146 (481)
T 2o3j_A 78 SDIPKAIAEADLIFISVNTPTKMYGRGKG-MAPDLKYVESVSRTIAQYAGGPKIVVEKSTVPVKAAESIG 146 (481)
T ss_dssp SCHHHHHHHCSEEEECCCCCBCCSSTTTT-TSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHH
T ss_pred CCHHHHhhcCCEEEEecCCcccccccccc-CCCcHHHHHHHHHHHHHhCCCCCEEEECCCCCCCHHHHHH
Confidence 46668899999999998776543322211 0111234455556666665 44444433 88887665443
No 50
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=73.70 E-value=1.6 Score=40.08 Aligned_cols=63 Identities=14% Similarity=0.160 Sum_probs=37.6
Q ss_pred CchhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEE-ecCCccchHHHH
Q 022546 41 EQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIANYCPHALVNM-ISNPVNSTVPIA 108 (295)
Q Consensus 41 ~d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~viv-~tNP~d~~t~~~ 108 (295)
+|+.+++++||+||++...+...+..+.++ ..+.++++.+.+..|+.+|+. .|||.+....+.
T Consensus 65 ~~~~~~~~~aDvviiavpt~~~~~~~~~dl-----~~v~~v~~~i~~l~~~~iVV~~ST~~~g~~~~l~ 128 (402)
T 1dlj_A 65 LDSKAAYKEAELVIIATPTNYNSRINYFDT-----QHVETVIKEVLSVNSHATLIIKSTIPIGFITEMR 128 (402)
T ss_dssp SCHHHHHHHCSEEEECCCCCEETTTTEECC-----HHHHHHHHHHHHHCSSCEEEECSCCCTTHHHHHH
T ss_pred CCHHHHhcCCCEEEEecCCCcccCCCCccH-----HHHHHHHHHHHhhCCCCEEEEeCCCCccHHHHHH
Confidence 456678999999999866553222222221 223333334433457776665 699999876654
No 51
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=65.79 E-value=14 Score=34.23 Aligned_cols=63 Identities=19% Similarity=0.310 Sum_probs=35.5
Q ss_pred CCchhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEe-cCCccchHHH
Q 022546 40 EEQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIANYC-PHALVNMI-SNPVNSTVPI 107 (295)
Q Consensus 40 t~d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~-p~a~viv~-tNP~d~~t~~ 107 (295)
|+|+.+++++||+||++-+.|...+... -+...+++.++.|.++- |..++|.- |-|.+..-.+
T Consensus 75 ttd~~ea~~~aDvvii~Vptp~~~~~~~-----~Dl~~v~~v~~~i~~~l~~g~iVV~~STv~pgtt~~l 139 (446)
T 4a7p_A 75 TTDLAEGVKDADAVFIAVGTPSRRGDGH-----ADLSYVFAAAREIAENLTKPSVIVTKSTVPVGTGDEV 139 (446)
T ss_dssp ESCHHHHHTTCSEEEECCCCCBCTTTCC-----BCTHHHHHHHHHHHHSCCSCCEEEECSCCCTTHHHHH
T ss_pred ECCHHHHHhcCCEEEEEcCCCCccccCC-----ccHHHHHHHHHHHHHhcCCCCEEEEeCCCCchHHHHH
Confidence 3577789999999999876664321111 11233444445555554 45555554 4455554444
No 52
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=62.79 E-value=8.5 Score=29.18 Aligned_cols=67 Identities=15% Similarity=0.176 Sum_probs=40.5
Q ss_pred EEEEeCCC--chhHHHhhhCCCCCCeEEEeeCCCchhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 022546 10 LSLYDIAN--TPGVAADVSHINSPAQVEGYAGEEQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIAN 87 (295)
Q Consensus 10 i~L~D~~~--~~~~~~Dl~~~~~~~~v~~~~~t~d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~i~~~i~~ 87 (295)
++++|.+. ++..+.++. ..+.. .+++.++++++|+||.+.+.+. +-... ..
T Consensus 47 v~v~~r~~~~~~~~a~~~~-----~~~~~---~~~~~~~~~~~Divi~at~~~~-~~~~~------------------~~ 99 (144)
T 3oj0_A 47 VTVAGRNIDHVRAFAEKYE-----YEYVL---INDIDSLIKNNDVIITATSSKT-PIVEE------------------RS 99 (144)
T ss_dssp EEEEESCHHHHHHHHHHHT-----CEEEE---CSCHHHHHHTCSEEEECSCCSS-CSBCG------------------GG
T ss_pred EEEEcCCHHHHHHHHHHhC-----CceEe---ecCHHHHhcCCCEEEEeCCCCC-cEeeH------------------HH
Confidence 99999875 333333332 12222 2456788999999999766542 11111 12
Q ss_pred hCCCeEEEEecCCccc
Q 022546 88 YCPHALVNMISNPVNS 103 (295)
Q Consensus 88 ~~p~a~viv~tNP~d~ 103 (295)
..|.++++.+++|.|+
T Consensus 100 l~~g~~vid~~~p~~~ 115 (144)
T 3oj0_A 100 LMPGKLFIDLGNPPNI 115 (144)
T ss_dssp CCTTCEEEECCSSCSB
T ss_pred cCCCCEEEEccCCccC
Confidence 2357899999999764
No 53
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=59.94 E-value=10 Score=33.64 Aligned_cols=66 Identities=12% Similarity=0.061 Sum_probs=43.4
Q ss_pred CCchhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCCccchHHHHHHHHHHhCCC
Q 022546 40 EEQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIANYC-PHALVNMISNPVNSTVPIAAEVFKKAGTY 118 (295)
Q Consensus 40 t~d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~-p~a~viv~tNP~d~~t~~~~~~~k~sg~~ 118 (295)
++|+.+++++||+|+=+. -.|..+=+++-..+.+++ |++ |+.||-..+...-+ .....
T Consensus 78 ~~~l~~a~~~ad~ViEav--------------~E~l~iK~~lf~~l~~~~~~~a--IlaSNTSsl~is~i---a~~~~-- 136 (319)
T 3ado_A 78 CTNLAEAVEGVVHIQECV--------------PENLDLKRKIFAQLDSIVDDRV--VLSSSSSCLLPSKL---FTGLA-- 136 (319)
T ss_dssp ECCHHHHTTTEEEEEECC--------------CSCHHHHHHHHHHHHTTCCSSS--EEEECCSSCCHHHH---HTTCT--
T ss_pred ccchHhHhccCcEEeecc--------------ccHHHHHHHHHHHHHHHhhhcc--eeehhhhhccchhh---hhhcc--
Confidence 357788999999987543 123455567777888888 555 45888887655332 33332
Q ss_pred CCCCeeec
Q 022546 119 DEKKLFGV 126 (295)
Q Consensus 119 ~~~kviG~ 126 (295)
.|+|++|+
T Consensus 137 ~p~r~ig~ 144 (319)
T 3ado_A 137 HVKQCIVA 144 (319)
T ss_dssp TGGGEEEE
T ss_pred CCCcEEEe
Confidence 36788886
No 54
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=59.83 E-value=15 Score=36.52 Aligned_cols=64 Identities=17% Similarity=0.246 Sum_probs=41.0
Q ss_pred CchhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCCccchHHHHHHHHHHhCCCC
Q 022546 41 EQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIANYC-PHALVNMISNPVNSTVPIAAEVFKKAGTYD 119 (295)
Q Consensus 41 ~d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~-p~a~viv~tNP~d~~t~~~~~~~k~sg~~~ 119 (295)
++ .+++++||+||=+. ..|..+=+++-..+.+++ |++ |+.||-..+-..-+ ...+. .
T Consensus 386 ~~-~~~l~~aDlVIEAV--------------~E~l~iK~~vf~~le~~~~~~a--IlASNTSsl~i~~i---a~~~~--~ 443 (742)
T 3zwc_A 386 SS-TKELSTVDLVVEAV--------------FEDMNLKKKVFAELSALCKPGA--FLCTNTSALNVDDI---ASSTD--R 443 (742)
T ss_dssp SC-GGGGGSCSEEEECC--------------CSCHHHHHHHHHHHHHHSCTTC--EEEECCSSSCHHHH---HTTSS--C
T ss_pred Cc-HHHHhhCCEEEEec--------------cccHHHHHHHHHHHhhcCCCCc--eEEecCCcCChHHH---HhhcC--C
Confidence 44 47899999988653 133455667777788887 565 45788877554322 23332 3
Q ss_pred CCCeeec
Q 022546 120 EKKLFGV 126 (295)
Q Consensus 120 ~~kviG~ 126 (295)
|+||+|+
T Consensus 444 p~r~ig~ 450 (742)
T 3zwc_A 444 PQLVIGT 450 (742)
T ss_dssp GGGEEEE
T ss_pred ccccccc
Confidence 5788886
No 55
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=56.54 E-value=11 Score=34.56 Aligned_cols=62 Identities=21% Similarity=0.194 Sum_probs=33.8
Q ss_pred CchhhhcCCCcEEEEcCCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEe-cCCccchH
Q 022546 41 EQLGKALEGSDVVIIPAGVPRKP-GMTRDDLFNINAGIVKSLCTAIANYCPHALVNMI-SNPVNSTV 105 (295)
Q Consensus 41 ~d~~~al~daDiVvi~~g~~~~~-g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~viv~-tNP~d~~t 105 (295)
+|+.+++++||+||++...+... |...+..+. ..++++.+.+.+.+++.+|+.. |+|.+...
T Consensus 68 ~~~~~~~~~aDvviiaVptp~~~~~~~dl~~v~---~v~~~i~~~l~~~~~~~iVV~~Stv~~g~t~ 131 (436)
T 1mv8_A 68 TDFKKAVLDSDVSFICVGTPSKKNGDLDLGYIE---TVCREIGFAIREKSERHTVVVRSTVLPGTVN 131 (436)
T ss_dssp SCHHHHHHTCSEEEECCCCCBCTTSSBCCHHHH---HHHHHHHHHHTTCCSCCEEEECSCCCTTHHH
T ss_pred CCHHHHhccCCEEEEEcCCCcccCCCcchHHHH---HHHHHHHHHhcccCCCcEEEEeCCcCCCchH
Confidence 46667899999999987665432 221121222 2234444443211115666655 88877633
No 56
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=55.35 E-value=32 Score=31.75 Aligned_cols=64 Identities=22% Similarity=0.259 Sum_probs=33.8
Q ss_pred CCchhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEe-cCCccchHHHH
Q 022546 40 EEQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIANYCPHALVNMI-SNPVNSTVPIA 108 (295)
Q Consensus 40 t~d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~viv~-tNP~d~~t~~~ 108 (295)
++|+.+++++||+||++...+........ +...+++.++.+.+..|..+|+.- |-|.+..-.+.
T Consensus 100 ttd~~ea~~~aDvViiaVPt~~~~~~~~~-----Dl~~V~~v~~~i~~l~~g~iVV~~STv~pgtt~~l~ 164 (432)
T 3pid_A 100 TTDKHDAYRNADYVIIATPTDYDPKTNYF-----NTSTVEAVIRDVTEINPNAVMIIKSTIPVGFTRDIK 164 (432)
T ss_dssp ESCHHHHHTTCSEEEECCCCEEETTTTEE-----ECHHHHHHHHHHHHHCTTSEEEECSCCCTTHHHHHH
T ss_pred EcCHHHHHhCCCEEEEeCCCccccccccc-----cHHHHHHHHHHHHhcCCCcEEEEeCCCChHHHHHHH
Confidence 35777899999999997543321111111 111222223333334566666554 66776655553
No 57
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=53.72 E-value=20 Score=30.74 Aligned_cols=89 Identities=15% Similarity=0.165 Sum_probs=48.5
Q ss_pred cCeEEEEeCCCchhHHHhhhCCCCCCeEEEeeCCCchhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 022546 7 VSSLSLYDIANTPGVAADVSHINSPAQVEGYAGEEQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIA 86 (295)
Q Consensus 7 ~~ei~L~D~~~~~~~~~Dl~~~~~~~~v~~~~~t~d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~i~~~i~ 86 (295)
..+++++|+++. ...++... + .+... .|..+++++||+||++.- +. .++++.+.+.
T Consensus 29 ~~~V~v~dr~~~--~~~~l~~~-~--gi~~~---~~~~~~~~~aDvVilav~----p~------------~~~~vl~~l~ 84 (280)
T 3tri_A 29 PNRICVTNRSLD--KLDFFKEK-C--GVHTT---QDNRQGALNADVVVLAVK----PH------------QIKMVCEELK 84 (280)
T ss_dssp GGGEEEECSSSH--HHHHHHHT-T--CCEEE---SCHHHHHSSCSEEEECSC----GG------------GHHHHHHHHH
T ss_pred CCeEEEEeCCHH--HHHHHHHH-c--CCEEe---CChHHHHhcCCeEEEEeC----HH------------HHHHHHHHHH
Confidence 458999998762 11222211 1 12222 345688999999999751 21 2233444444
Q ss_pred hh--CCCeEEEEecCCccchHHHHHHHHHHhCCCCCCCeeec
Q 022546 87 NY--CPHALVNMISNPVNSTVPIAAEVFKKAGTYDEKKLFGV 126 (295)
Q Consensus 87 ~~--~p~a~viv~tNP~d~~t~~~~~~~k~sg~~~~~kviG~ 126 (295)
.+ .++.+++.+++...+ ..+ .+..+ ++.++++.
T Consensus 85 ~~~l~~~~iiiS~~agi~~-~~l----~~~l~--~~~~vvr~ 119 (280)
T 3tri_A 85 DILSETKILVISLAVGVTT-PLI----EKWLG--KASRIVRA 119 (280)
T ss_dssp HHHHTTTCEEEECCTTCCH-HHH----HHHHT--CCSSEEEE
T ss_pred hhccCCCeEEEEecCCCCH-HHH----HHHcC--CCCeEEEE
Confidence 43 467788888777763 222 23322 13577776
No 58
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=53.07 E-value=45 Score=30.89 Aligned_cols=48 Identities=21% Similarity=0.331 Sum_probs=29.3
Q ss_pred CchhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCCccchH
Q 022546 41 EQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIANYC-PHALVNMISNPVNSTV 105 (295)
Q Consensus 41 ~d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~-p~a~viv~tNP~d~~t 105 (295)
+|+ +++++||+||.+... +..+.+++...+..+. |+++++ +|...+-.
T Consensus 107 ~~~-~~~~~aDlVIeaVpe--------------~~~~k~~v~~~l~~~~~~~~ii~--snTs~~~~ 155 (463)
T 1zcj_A 107 SST-KELSTVDLVVEAVFE--------------DMNLKKKVFAELSALCKPGAFLC--TNTSALNV 155 (463)
T ss_dssp SCG-GGGTTCSEEEECCCS--------------CHHHHHHHHHHHHHHSCTTCEEE--ECCSSSCH
T ss_pred CCH-HHHCCCCEEEEcCCC--------------CHHHHHHHHHHHHhhCCCCeEEE--eCCCCcCH
Confidence 455 789999999997631 2334444555566665 566554 46655433
No 59
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron}
Probab=50.09 E-value=46 Score=26.09 Aligned_cols=49 Identities=22% Similarity=0.350 Sum_probs=32.8
Q ss_pred CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEec-CCc
Q 022546 48 EGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIANYCPHALVNMIS-NPV 101 (295)
Q Consensus 48 ~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~viv~t-NP~ 101 (295)
...|+|++..|..-. ..+ .+.+..| +++++..+++.+|++.++.++ .|+
T Consensus 73 ~~pd~Vvi~~G~ND~-~~~-~~~~~~~---l~~ii~~l~~~~p~~~ii~~~~~P~ 122 (200)
T 4h08_A 73 TKFDVIHFNNGLHGF-DYT-EEEYDKS---FPKLIKIIRKYAPKAKLIWANTTPV 122 (200)
T ss_dssp SCCSEEEECCCSSCT-TSC-HHHHHHH---HHHHHHHHHHHCTTCEEEEECCCCC
T ss_pred CCCCeEEEEeeeCCC-CCC-HHHHHHH---HHHHHHHHhhhCCCccEEEeccCCC
Confidence 578999997775421 122 2333444 677888899999999887775 444
No 60
>2i9x_A Putative septation protein spovg; APC86317.1, staphylococcus epidermidis ATCC 12228, ST genomics, PSI-2, protein structure initiative; 1.80A {Staphylococcus epidermidis} SCOP: d.366.1.1
Probab=49.44 E-value=39 Score=23.80 Aligned_cols=41 Identities=12% Similarity=0.180 Sum_probs=33.3
Q ss_pred EeeCCCCCccEEEEeEEEcCCceEEEccCCCCCHHHHHHHHHHH
Q 022546 235 FVQSSVTELPFFASKVRLGKNGADEVLGLGPLSDYEKQGLESLK 278 (295)
Q Consensus 235 ~~~g~~~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~ 278 (295)
+++|+ .+.|+++|-+=.++|..+=+-. |+|.+-++.|+.++
T Consensus 39 Vieg~--~GlFVaMPs~k~~~g~y~Di~h-Pit~e~Re~i~~aV 79 (87)
T 2i9x_A 39 VIEGN--SGLFVAMPSKRTPDGEFRDIAH-PINSDMRQEIQDAV 79 (87)
T ss_dssp EEEET--TEEEEECCEEECTTSCEEECEE-ECSHHHHHHHHHHH
T ss_pred EEECC--CceEEECCCcCCCCCCEEEEEE-ECCHHHHHHHHHHH
Confidence 45664 5899999999888888775555 89999999998864
No 61
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=48.11 E-value=24 Score=32.73 Aligned_cols=64 Identities=19% Similarity=0.235 Sum_probs=39.3
Q ss_pred CCchhhhcCCCcEEEEcCCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHhhCCCeEEEE-ecCCccchHH
Q 022546 40 EEQLGKALEGSDVVIIPAGVPRKPGM-TRDDLFNINAGIVKSLCTAIANYCPHALVNM-ISNPVNSTVP 106 (295)
Q Consensus 40 t~d~~~al~daDiVvi~~g~~~~~g~-~r~~~~~~n~~i~~~i~~~i~~~~p~a~viv-~tNP~d~~t~ 106 (295)
|+|+.+++++||+++++.+.|...+. ..+..+. ...+.+++.++..++..+|++ =|=|....-.
T Consensus 88 tt~~~~ai~~ad~~~I~VpTP~~~d~~~Dl~~v~---~a~~~I~~~l~~~~~g~lVV~eSTVppGtte~ 153 (444)
T 3vtf_A 88 AESAEEAVAATDATFIAVGTPPAPDGSADLRYVE---AAARAVGRGIRAKGRWHLVVVKSTVPPGTTEG 153 (444)
T ss_dssp CSSHHHHHHTSSEEEECCCCCBCTTSSBCCHHHH---HHHHHHHHHHHHHCSCCEEEECSCCCTTTTTT
T ss_pred EcCHHHHHhcCCceEEEecCCCCCCCCCCcHHHH---HHHHHHHHHHhhcCCCeEEEEeCCCCCchHHH
Confidence 35667899999999999887755432 2232332 445677777766555444333 2667665443
No 62
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=47.24 E-value=36 Score=28.97 Aligned_cols=47 Identities=15% Similarity=0.304 Sum_probs=29.2
Q ss_pred CchhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCCc
Q 022546 41 EQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIANYC-PHALVNMISNPV 101 (295)
Q Consensus 41 ~d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~-p~a~viv~tNP~ 101 (295)
+|+.+++++||+||.+.... ....+++...+.++. |+++++..|...
T Consensus 77 ~~~~~~~~~aDlVi~av~~~--------------~~~~~~v~~~l~~~~~~~~il~s~tS~~ 124 (283)
T 4e12_A 77 DDLAQAVKDADLVIEAVPES--------------LDLKRDIYTKLGELAPAKTIFATNSSTL 124 (283)
T ss_dssp SCHHHHTTTCSEEEECCCSC--------------HHHHHHHHHHHHHHSCTTCEEEECCSSS
T ss_pred CCHHHHhccCCEEEEeccCc--------------HHHHHHHHHHHHhhCCCCcEEEECCCCC
Confidence 46677899999999975321 234444555566665 667665444444
No 63
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=47.12 E-value=26 Score=30.63 Aligned_cols=46 Identities=22% Similarity=0.287 Sum_probs=26.3
Q ss_pred CCCcCeEEEEeCCC-chhHHHhhhCCCCCCeEEEeeCCCchhh-hcCCCcEEEEcC
Q 022546 4 DPLVSSLSLYDIAN-TPGVAADVSHINSPAQVEGYAGEEQLGK-ALEGSDVVIIPA 57 (295)
Q Consensus 4 ~~~~~ei~L~D~~~-~~~~~~Dl~~~~~~~~v~~~~~t~d~~~-al~daDiVvi~~ 57 (295)
.|...+|+++|.++ ....+.++. .. . .. ++++.+ ++++||+||++.
T Consensus 55 ~G~~~~V~~~dr~~~~~~~a~~~G--~~--~-~~---~~~~~~~~~~~aDvVilav 102 (314)
T 3ggo_A 55 SGFKGKIYGYDINPESISKAVDLG--II--D-EG---TTSIAKVEDFSPDFVMLSS 102 (314)
T ss_dssp TTCCSEEEEECSCHHHHHHHHHTT--SC--S-EE---ESCTTGGGGGCCSEEEECS
T ss_pred CCCCCEEEEEECCHHHHHHHHHCC--Cc--c-hh---cCCHHHHhhccCCEEEEeC
Confidence 44445899999875 222222221 10 0 11 134566 799999999974
No 64
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=47.08 E-value=75 Score=27.64 Aligned_cols=46 Identities=15% Similarity=0.239 Sum_probs=31.1
Q ss_pred CchhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCCcc
Q 022546 41 EQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIANYC-PHALVNMISNPVN 102 (295)
Q Consensus 41 ~d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~-p~a~viv~tNP~d 102 (295)
+|+.+++++||+||++.... .++++.+.+..+. |+.+++.++|-.+
T Consensus 82 ~~~~~~~~~aD~Vilav~~~----------------~~~~v~~~i~~~l~~~~ivv~~~~Gi~ 128 (354)
T 1x0v_A 82 PDVVQAAEDADILIFVVPHQ----------------FIGKICDQLKGHLKANATGISLIKGVD 128 (354)
T ss_dssp SSHHHHHTTCSEEEECCCGG----------------GHHHHHHHHTTCSCTTCEEEECCCCBC
T ss_pred cCHHHHHcCCCEEEEeCCHH----------------HHHHHHHHHHhhCCCCCEEEEECCccC
Confidence 45667899999999975211 2345555666553 6788898888554
No 65
>3dci_A Arylesterase; SGNH_hydrolase SUBF structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Agrobacterium tumefaciens str}
Probab=46.98 E-value=31 Score=28.08 Aligned_cols=51 Identities=16% Similarity=0.167 Sum_probs=32.2
Q ss_pred CCCcEEEEcCCCCCCC-CC-CHHHHHHHHHHHHHHHHHHHHhhC-----CCeEEEEecCCc
Q 022546 48 EGSDVVIIPAGVPRKP-GM-TRDDLFNINAGIVKSLCTAIANYC-----PHALVNMISNPV 101 (295)
Q Consensus 48 ~daDiVvi~~g~~~~~-g~-~r~~~~~~n~~i~~~i~~~i~~~~-----p~a~viv~tNP~ 101 (295)
+.+|+|++..|..-.. +. ...+.+. .-++++++.+++.. |++.|++++.|.
T Consensus 100 ~p~d~VvI~~GtND~~~~~~~~~~~~~---~~l~~li~~ir~~~~~~~~p~~~iil~~p~~ 157 (232)
T 3dci_A 100 MPLDLVIIMLGTNDIKPVHGGRAEAAV---SGMRRLAQIVETFIYKPREAVPKLLIVAPPP 157 (232)
T ss_dssp CSCSEEEEECCTTTTSGGGTSSHHHHH---HHHHHHHHHHHHCCCSSTTCCCEEEEEECCC
T ss_pred CCCCEEEEEeccCCCccccCCCHHHHH---HHHHHHHHHHHHhcccccCCCCeEEEEeCCC
Confidence 4469999987754211 11 1233334 44677888888876 888888887554
No 66
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=45.81 E-value=56 Score=26.41 Aligned_cols=56 Identities=18% Similarity=0.108 Sum_probs=41.7
Q ss_pred CchhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEecC
Q 022546 41 EQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIANYCPHALVNMISN 99 (295)
Q Consensus 41 ~d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~viv~tN 99 (295)
.++.++++++|+||.++|... ..+....+..|+.-...+++.+++.+. +.+|++|.
T Consensus 76 ~~~~~~~~~~D~vi~~ag~~~--~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~iv~~SS 131 (236)
T 3e8x_A 76 EDFSHAFASIDAVVFAAGSGP--HTGADKTILIDLWGAIKTIQEAEKRGI-KRFIMVSS 131 (236)
T ss_dssp SCCGGGGTTCSEEEECCCCCT--TSCHHHHHHTTTHHHHHHHHHHHHHTC-CEEEEECC
T ss_pred HHHHHHHcCCCEEEECCCCCC--CCCccccchhhHHHHHHHHHHHHHcCC-CEEEEEec
Confidence 345788999999999988653 234566777888888899999988764 35666655
No 67
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=45.18 E-value=34 Score=27.74 Aligned_cols=51 Identities=24% Similarity=0.299 Sum_probs=29.8
Q ss_pred eEEEeeCCCchhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCcc
Q 022546 33 QVEGYAGEEQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIANYCPHALVNMISNPVN 102 (295)
Q Consensus 33 ~v~~~~~t~d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~viv~tNP~d 102 (295)
++.....+ ++++++||+|+++.. + +.++++.+.+..+.++.+++.++|+.+
T Consensus 44 ~V~~~~~~---~~~~~~aD~vi~av~-~---------------~~~~~v~~~l~~~~~~~~vi~~~~g~~ 94 (209)
T 2raf_A 44 EVTYYGSK---DQATTLGEIVIMAVP-Y---------------PALAALAKQYATQLKGKIVVDITNPLN 94 (209)
T ss_dssp EEEEECTT---CCCSSCCSEEEECSC-H---------------HHHHHHHHHTHHHHTTSEEEECCCCBC
T ss_pred EEEEEcCC---HHHhccCCEEEEcCC-c---------------HHHHHHHHHHHHhcCCCEEEEECCCCC
Confidence 66655322 237899999999753 1 112233333333223778999999765
No 68
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=43.76 E-value=31 Score=31.39 Aligned_cols=51 Identities=12% Similarity=0.305 Sum_probs=35.5
Q ss_pred CCeEEEeeCCCchhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCC
Q 022546 31 PAQVEGYAGEEQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIANYC-PHALVNMISNP 100 (295)
Q Consensus 31 ~~~v~~~~~t~d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~-p~a~viv~tNP 100 (295)
+..++. |+|+.+++++||+||++. | .+.++++++.++.+- ++..+|.++.=
T Consensus 102 p~~i~~---t~dl~~al~~ad~ii~av--P--------------s~~~r~~l~~l~~~~~~~~~iv~~~KG 153 (391)
T 4fgw_A 102 PDNLVA---NPDLIDSVKDVDIIVFNI--P--------------HQFLPRICSQLKGHVDSHVRAISCLKG 153 (391)
T ss_dssp CSSEEE---ESCHHHHHTTCSEEEECS--C--------------GGGHHHHHHHHTTTSCTTCEEEECCCS
T ss_pred CCCcEE---eCCHHHHHhcCCEEEEEC--C--------------hhhhHHHHHHhccccCCCceeEEeccc
Confidence 345664 368899999999999963 2 245677777777765 56677776543
No 69
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=43.63 E-value=35 Score=29.27 Aligned_cols=46 Identities=11% Similarity=0.232 Sum_probs=27.4
Q ss_pred CchhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCC
Q 022546 41 EQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIANYC-PHALVNMISNP 100 (295)
Q Consensus 41 ~d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~-p~a~viv~tNP 100 (295)
+|+.+++++||+||++... +..+.+++...+.++. |+++++..|+.
T Consensus 92 ~~~~~~~~~aD~Vi~avp~--------------~~~~~~~v~~~l~~~~~~~~iv~s~ts~ 138 (302)
T 1f0y_A 92 TDAASVVHSTDLVVEAIVE--------------NLKVKNELFKRLDKFAAEHTIFASNTSS 138 (302)
T ss_dssp SCHHHHTTSCSEEEECCCS--------------CHHHHHHHHHHHTTTSCTTCEEEECCSS
T ss_pred cCHHHhhcCCCEEEEcCcC--------------cHHHHHHHHHHHHhhCCCCeEEEECCCC
Confidence 4666689999999997521 1223344555666665 56655434443
No 70
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=42.81 E-value=25 Score=29.28 Aligned_cols=45 Identities=11% Similarity=0.262 Sum_probs=28.3
Q ss_pred chhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHH-HHHHHhhCCCeEEEEecCCcc
Q 022546 42 QLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSL-CTAIANYCPHALVNMISNPVN 102 (295)
Q Consensus 42 d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~i-~~~i~~~~p~a~viv~tNP~d 102 (295)
+..+++++||+||++...+ . - ...+.++ .+.+ ++.++|.++||.+
T Consensus 83 ~~~e~~~~aDvVilavp~~----~-~-------~~~~~~i~~~~l----~g~ivi~~s~~~~ 128 (245)
T 3dtt_A 83 AFADVAAGAELVVNATEGA----S-S-------IAALTAAGAENL----AGKILVDIANPLD 128 (245)
T ss_dssp EHHHHHHHCSEEEECSCGG----G-H-------HHHHHHHCHHHH----TTSEEEECCCCEE
T ss_pred CHHHHHhcCCEEEEccCcH----H-H-------HHHHHHhhhhhc----CCCEEEECCCCCC
Confidence 4568899999999975321 1 0 1223333 2222 7789999999873
No 71
>2ia9_A Putative septation protein spovg; APC85465, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2; 3.00A {Bacillus subtilis} SCOP: d.366.1.1
Probab=40.74 E-value=60 Score=23.49 Aligned_cols=41 Identities=10% Similarity=0.156 Sum_probs=33.4
Q ss_pred EeeCCCCCccEEEEeEEEcCCceEEEccCCCCCHHHHHHHHHHH
Q 022546 235 FVQSSVTELPFFASKVRLGKNGADEVLGLGPLSDYEKQGLESLK 278 (295)
Q Consensus 235 ~~~g~~~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~ 278 (295)
+++|+ .+.|+++|-+=.++|..+=+-. |+|.+-++.|+.++
T Consensus 39 Vieg~--~GlFVaMPSrk~~~Gey~DI~h-Pit~e~Re~i~~aV 79 (100)
T 2ia9_A 39 VIDGN--NGLFVAMPSKRTPDGEFRDITH-PINSSTRGKIQDAV 79 (100)
T ss_dssp EEEET--TEEEEECCEEECTTSCEEESEE-ESSHHHHHHHHHHH
T ss_pred EEECC--CceEEECCCcCCCCCCEEEEEE-ECCHHHHHHHHHHH
Confidence 45664 5899999999988888775555 89999999998874
No 72
>2i9z_A Putative septation protein spovg; APC86317, staphylococcus epidermidis ATCC 12228, STRU genomics, PSI-2, protein structure initiative; 2.30A {Staphylococcus epidermidis} SCOP: d.366.1.1
Probab=40.56 E-value=60 Score=23.72 Aligned_cols=41 Identities=12% Similarity=0.180 Sum_probs=33.3
Q ss_pred EeeCCCCCccEEEEeEEEcCCceEEEccCCCCCHHHHHHHHHHH
Q 022546 235 FVQSSVTELPFFASKVRLGKNGADEVLGLGPLSDYEKQGLESLK 278 (295)
Q Consensus 235 ~~~g~~~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~ 278 (295)
+++|. .+.|+++|-+=.++|..+=+.. |++.+-++.|+.++
T Consensus 39 ViEg~--~GlFVaMPSrk~~~GeyrDI~h-PIt~e~Re~i~~aV 79 (105)
T 2i9z_A 39 VIEGN--SGLFVAMPSKRTPDGEFRDIAH-PINSDMRQEIQDAV 79 (105)
T ss_dssp EEEET--TEEEEECCEEECTTSCEEECEE-ESSHHHHHHHHHHH
T ss_pred EEECC--CceEEECCCcCCCCCCEEEEEE-ECCHHHHHHHHHHH
Confidence 45664 5899999999888888875555 89999999998864
No 73
>3npg_A Uncharacterized DUF364 family protein; protein with unknown function from DUF364 family, structural genomics; 2.70A {Pyrococcus horikoshii}
Probab=40.28 E-value=14 Score=31.44 Aligned_cols=73 Identities=18% Similarity=0.162 Sum_probs=45.2
Q ss_pred hhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCccchHHHHHHHHHHhCCCCCCCee
Q 022546 45 KALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIANYCPHALVNMISNPVNSTVPIAAEVFKKAGTYDEKKLF 124 (295)
Q Consensus 45 ~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~k~sg~~~~~kvi 124 (295)
+.+..||+|++|+. .+...++ +.+-++++++..+++.-|...+.+.+ ++..| -.-+-
T Consensus 160 ~~l~~~D~v~iTGs----------TlvN~Ti-------~~lL~~~~~~~~vvl~GPS~~~~P~~---~~~~G---v~~l~ 216 (249)
T 3npg_A 160 HILPEVDGIIASAS----------CIVNGTL-------DMILDRAKKAKLIVITGPTGQLLPEF---LKGTK---VTHLA 216 (249)
T ss_dssp HHGGGCSEEEEETT----------HHHHTCH-------HHHHHHCSSCSEEEEESGGGCSCGGG---GTTSS---CCEEE
T ss_pred hhhccCCEEEEEee----------eeccCCH-------HHHHHhCcccCeEEEEecCchhhHHH---HhhCC---ccEEE
Confidence 47889999999974 1333333 34455666665555666766676643 33344 34455
Q ss_pred ecchhhHHHHHHHHHh
Q 022546 125 GVTTLDVVRAKTFYAG 140 (295)
Q Consensus 125 G~t~ld~~R~~~~la~ 140 (295)
|+-..|..++...+++
T Consensus 217 g~~v~d~~~~l~~i~~ 232 (249)
T 3npg_A 217 SMKVTNIEKALVKLKL 232 (249)
T ss_dssp EEEESCHHHHHHHHHH
T ss_pred EEEecCHHHHHHHHHc
Confidence 5556788788777754
No 74
>1es9_A PAF-AH, platelet-activating factor acetylhydrolase IB gamma subunit; alpha/beta hydrolase fold; 1.30A {Bos taurus} SCOP: c.23.10.3 PDB: 1wab_A 1fxw_A 1bwr_A 1bwq_A 1bwp_A 3dt9_A* 3dt6_A* 3dt8_A*
Probab=39.74 E-value=57 Score=26.29 Aligned_cols=47 Identities=15% Similarity=0.219 Sum_probs=32.3
Q ss_pred CCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCC
Q 022546 49 GSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIANYCPHALVNMISNP 100 (295)
Q Consensus 49 daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~viv~tNP 100 (295)
..|+||+..|...-. . ..+. -..-++++++.+++..|++.|++++.|
T Consensus 93 ~pd~vvi~~G~ND~~-~-~~~~---~~~~l~~~i~~l~~~~p~~~ii~~~~~ 139 (232)
T 1es9_A 93 RPKIVVVWVGTNNHG-H-TAEQ---VTGGIKAIVQLVNERQPQARVVVLGLL 139 (232)
T ss_dssp CCSEEEEECCTTCTT-S-CHHH---HHHHHHHHHHHHHHHSTTCEEEEECCC
T ss_pred CCCEEEEEeecCCCC-C-CHHH---HHHHHHHHHHHHHHHCCCCeEEEecCC
Confidence 689999977754322 2 2222 234577888888888899988888765
No 75
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=39.41 E-value=97 Score=26.29 Aligned_cols=58 Identities=16% Similarity=0.036 Sum_probs=41.2
Q ss_pred chhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCC
Q 022546 42 QLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIANYCPHALVNMISNP 100 (295)
Q Consensus 42 d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~viv~tNP 100 (295)
++.++++++|+||-+++... .+.+..+.+..|+.-...+.+.+.+......+|.+|..
T Consensus 76 ~~~~~~~~~d~vih~A~~~~-~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~ 133 (342)
T 1y1p_A 76 AYDEVIKGAAGVAHIASVVS-FSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSST 133 (342)
T ss_dssp TTTTTTTTCSEEEECCCCCS-CCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCG
T ss_pred HHHHHHcCCCEEEEeCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccH
Confidence 34566788999999887653 23456678889999999999988753333567776653
No 76
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=39.15 E-value=63 Score=27.62 Aligned_cols=66 Identities=15% Similarity=0.235 Sum_probs=36.4
Q ss_pred CeEEEEeCCC-chhHHHhhhCCCCCCeEEEeeCCCchhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 022546 8 SSLSLYDIAN-TPGVAADVSHINSPAQVEGYAGEEQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIA 86 (295)
Q Consensus 8 ~ei~L~D~~~-~~~~~~Dl~~~~~~~~v~~~~~t~d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~i~~~i~ 86 (295)
-+++++|+++ ......+. .++. ++++.++++ ||+||++...+ ..++++.+.+.
T Consensus 39 ~~V~~~dr~~~~~~~~~~~-------g~~~---~~~~~~~~~-aDvvi~~vp~~---------------~~~~~v~~~l~ 92 (296)
T 3qha_A 39 GGVTVYDIRIEAMTPLAEA-------GATL---ADSVADVAA-ADLIHITVLDD---------------AQVREVVGELA 92 (296)
T ss_dssp TCEEEECSSTTTSHHHHHT-------TCEE---CSSHHHHTT-SSEEEECCSSH---------------HHHHHHHHHHH
T ss_pred CeEEEEeCCHHHHHHHHHC-------CCEE---cCCHHHHHh-CCEEEEECCCh---------------HHHHHHHHHHH
Confidence 3788899876 22222211 1222 245678888 99999975322 12334445555
Q ss_pred hhC-CCeEEEEecC
Q 022546 87 NYC-PHALVNMISN 99 (295)
Q Consensus 87 ~~~-p~a~viv~tN 99 (295)
... |+.+++..|+
T Consensus 93 ~~l~~g~ivv~~st 106 (296)
T 3qha_A 93 GHAKPGTVIAIHST 106 (296)
T ss_dssp TTCCTTCEEEECSC
T ss_pred HhcCCCCEEEEeCC
Confidence 543 5666666654
No 77
>2q0q_A ARYL esterase; SGNH hydrolase, oligomeric enzyme, acyl transfer, ARYL ester hydrolase; 1.50A {Mycobacterium smegmatis} PDB: 2q0s_A*
Probab=38.89 E-value=42 Score=26.46 Aligned_cols=49 Identities=27% Similarity=0.151 Sum_probs=32.0
Q ss_pred CCCcEEEEcCCCCCC---CCCCHHHHHHHHHHHHHHHHHHHHhhC-------CCeEEEEecCC
Q 022546 48 EGSDVVIIPAGVPRK---PGMTRDDLFNINAGIVKSLCTAIANYC-------PHALVNMISNP 100 (295)
Q Consensus 48 ~daDiVvi~~g~~~~---~g~~r~~~~~~n~~i~~~i~~~i~~~~-------p~a~viv~tNP 100 (295)
+..|+|++..|...- .+.+- +.+ ..-++++++.+++.+ |++.+++++.|
T Consensus 82 ~p~d~vvi~~G~ND~~~~~~~~~-~~~---~~~l~~li~~~~~~~~~~~~~~P~~~iil~~~p 140 (216)
T 2q0q_A 82 LPLDLVIIMLGTNDTKAYFRRTP-LDI---ALGMSVLVTQVLTSAGGVGTTYPAPKVLVVSPP 140 (216)
T ss_dssp CSCSEEEEECCTGGGSGGGCCCH-HHH---HHHHHHHHHHHHTCTTTTTBCCCCCEEEEEECC
T ss_pred CCCCEEEEEecCcccchhcCCCH-HHH---HHHHHHHHHHHHHhcccccccCCCCeEEEEeCC
Confidence 335999997775321 13332 223 344677888888888 99988888765
No 78
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=38.57 E-value=39 Score=29.65 Aligned_cols=45 Identities=13% Similarity=0.172 Sum_probs=28.2
Q ss_pred CchhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEecC
Q 022546 41 EQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIANYC-PHALVNMISN 99 (295)
Q Consensus 41 ~d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~-p~a~viv~tN 99 (295)
+|+.+++++||+||.+... +..+.+++...+.++. |+++++..|.
T Consensus 79 ~~~~eav~~aDlVieavpe--------------~~~~k~~v~~~l~~~~~~~~Ii~s~tS 124 (319)
T 2dpo_A 79 TNLAEAVEGVVHIQECVPE--------------NLDLKRKIFAQLDSIVDDRVVLSSSSS 124 (319)
T ss_dssp CCHHHHTTTEEEEEECCCS--------------CHHHHHHHHHHHHTTCCSSSEEEECCS
T ss_pred CCHHHHHhcCCEEEEeccC--------------CHHHHHHHHHHHHhhCCCCeEEEEeCC
Confidence 4677899999999997521 1233444555677765 5665554433
No 79
>2w9x_A AXE2A, CJCE2B, putative acetyl xylan esterase; carbohydrate esterase family 2, hydrolase; 2.00A {Cellvibrio japonicus}
Probab=37.96 E-value=92 Score=27.51 Aligned_cols=54 Identities=13% Similarity=0.113 Sum_probs=35.4
Q ss_pred CCCcEEEEcCCCC-----CCCC---CCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCc
Q 022546 48 EGSDVVIIPAGVP-----RKPG---MTRDDLFNINAGIVKSLCTAIANYCPHALVNMISNPV 101 (295)
Q Consensus 48 ~daDiVvi~~g~~-----~~~g---~~r~~~~~~n~~i~~~i~~~i~~~~p~a~viv~tNP~ 101 (295)
...|+|||..|.. ..++ .........-..-++++++.+++..|++.|++++.|.
T Consensus 235 ~~Pd~VvI~lGtND~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ir~~~p~a~Iil~~pp~ 296 (366)
T 2w9x_A 235 WKPQVIVIGLGTNDFSTALNDNERWKTREALHADYVANYVKFVKQLHSNNARAQFILMNSDQ 296 (366)
T ss_dssp CCCSEEEEECCHHHHSSCCCTTSSCCSHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEESC
T ss_pred CCCCEEEEeCccCCCCCCCCCcccccccchHHHHHHHHHHHHHHHHHHHCCCCeEEEEeCCC
Confidence 4789999976632 1222 1222223444566888899999999999888887554
No 80
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=37.82 E-value=99 Score=26.38 Aligned_cols=59 Identities=10% Similarity=0.022 Sum_probs=40.4
Q ss_pred chhhhcCCCcEEEEcCCCCCCCCCCH-HHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCC
Q 022546 42 QLGKALEGSDVVIIPAGVPRKPGMTR-DDLFNINAGIVKSLCTAIANYCPHALVNMISNP 100 (295)
Q Consensus 42 d~~~al~daDiVvi~~g~~~~~g~~r-~~~~~~n~~i~~~i~~~i~~~~p~a~viv~tNP 100 (295)
++.++++++|+||-+++.......+. .+.+..|+.-...+.+.+.+.+.-..+|.+|.-
T Consensus 70 ~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~ 129 (337)
T 2c29_D 70 SFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSA 129 (337)
T ss_dssp TTHHHHTTCSEEEECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCG
T ss_pred HHHHHHcCCCEEEEeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeH
Confidence 45578899999999887432112222 346788999899999988887633466766653
No 81
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=37.15 E-value=26 Score=29.18 Aligned_cols=46 Identities=17% Similarity=0.259 Sum_probs=31.5
Q ss_pred chhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCccc
Q 022546 42 QLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIANYCPHALVNMISNPVNS 103 (295)
Q Consensus 42 d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~viv~tNP~d~ 103 (295)
++.+++++||+||++.. + .. ++++.+.+..+.++..++..+|.++.
T Consensus 51 ~~~~~~~~~D~vi~~v~-~---~~------------~~~v~~~l~~~l~~~~vv~~~~gi~~ 96 (262)
T 2rcy_A 51 SNEELARHCDIIVCAVK-P---DI------------AGSVLNNIKPYLSSKLLISICGGLNI 96 (262)
T ss_dssp CHHHHHHHCSEEEECSC-T---TT------------HHHHHHHSGGGCTTCEEEECCSSCCH
T ss_pred CHHHHHhcCCEEEEEeC-H---HH------------HHHHHHHHHHhcCCCEEEEECCCCCH
Confidence 45677899999999753 1 11 33444455555577888888998876
No 82
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=36.86 E-value=22 Score=28.54 Aligned_cols=45 Identities=16% Similarity=0.152 Sum_probs=28.5
Q ss_pred chhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCcc
Q 022546 42 QLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIANYCPHALVNMISNPVN 102 (295)
Q Consensus 42 d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~viv~tNP~d 102 (295)
++.++++++|+||++.... .. ..++.++.+.+ ++.+++.++|+.+
T Consensus 57 ~~~~~~~~~D~Vi~~~~~~---------~~---~~~~~~l~~~~----~~~~vi~~~~g~~ 101 (212)
T 1jay_A 57 KNEDAAEACDIAVLTIPWE---------HA---IDTARDLKNIL----REKIVVSPLVPVS 101 (212)
T ss_dssp EHHHHHHHCSEEEECSCHH---------HH---HHHHHHTHHHH----TTSEEEECCCCEE
T ss_pred hHHHHHhcCCEEEEeCChh---------hH---HHHHHHHHHHc----CCCEEEEcCCCcC
Confidence 4567889999999975311 11 12333333333 4778999999876
No 83
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=36.74 E-value=64 Score=27.72 Aligned_cols=56 Identities=20% Similarity=0.186 Sum_probs=41.5
Q ss_pred hhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEecC
Q 022546 43 LGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIANYCPHALVNMISN 99 (295)
Q Consensus 43 ~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~viv~tN 99 (295)
+.++++++|+||-+++............+..|+.-...+++.+.+.+.. .+|.+|.
T Consensus 71 ~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~-~~V~~SS 126 (347)
T 4id9_A 71 LSDAIMGVSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVR-RFVFASS 126 (347)
T ss_dssp HHHHHTTCSEEEECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCS-EEEEEEE
T ss_pred HHHHHhCCCEEEECCcccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCC-eEEEECC
Confidence 4577899999999988654333344778889999999999999887644 4555554
No 84
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=36.56 E-value=42 Score=31.23 Aligned_cols=42 Identities=14% Similarity=0.306 Sum_probs=27.0
Q ss_pred CchhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEe
Q 022546 41 EQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIANYC-PHALVNMI 97 (295)
Q Consensus 41 ~d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~-p~a~viv~ 97 (295)
+|+ +++++||+||.+... +..+.+++...+.+++ |+++++..
T Consensus 123 ~dl-~al~~aDlVIeAVpe--------------~~~vk~~v~~~l~~~~~~~aIlasn 165 (460)
T 3k6j_A 123 SDF-HKLSNCDLIVESVIE--------------DMKLKKELFANLENICKSTCIFGTN 165 (460)
T ss_dssp SCG-GGCTTCSEEEECCCS--------------CHHHHHHHHHHHHTTSCTTCEEEEC
T ss_pred CCH-HHHccCCEEEEcCCC--------------CHHHHHHHHHHHHhhCCCCCEEEec
Confidence 455 689999999997531 2344455556677776 66665433
No 85
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=36.44 E-value=1.4e+02 Score=23.57 Aligned_cols=89 Identities=9% Similarity=0.206 Sum_probs=55.2
Q ss_pred hhcCCCcEEEEcCCCCC-CCC----------CCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCccchHHHHHHHHH
Q 022546 45 KALEGSDVVIIPAGVPR-KPG----------MTRDDLFNINAGIVKSLCTAIANYCPHALVNMISNPVNSTVPIAAEVFK 113 (295)
Q Consensus 45 ~al~daDiVvi~~g~~~-~~g----------~~r~~~~~~n~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~k 113 (295)
.-++++.|.++...... ++. .+...+...--..+++.++.|.+.++| |++....++=++.- .+.
T Consensus 23 k~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~n--VVl~~k~I~d~a~~---~l~ 97 (178)
T 1gml_A 23 RYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCEDIIQLKPD--VVITEKGISDLAQH---YLM 97 (178)
T ss_dssp CEEESCCEEEESSCBSCC--------------CHHHHHHHHHHHHHHHHHHHHTTCCS--EEEESSCBCHHHHH---HHH
T ss_pred cccccceEEEEecccCCccccCccEEEECCHHHHHHHHHHHHHHHHHHHHHHhhcCCc--EEEECCcccHHHHH---HHH
Confidence 34678889888665432 111 234556677778999999999999998 56677777766532 122
Q ss_pred HhCCCCCCCeeecchhhHHHHHHHHHhhcCCC
Q 022546 114 KAGTYDEKKLFGVTTLDVVRAKTFYAGKVNVP 145 (295)
Q Consensus 114 ~sg~~~~~kviG~t~ld~~R~~~~la~~l~v~ 145 (295)
. ..++++-.++-. -...+|+.+|-.
T Consensus 98 k------~gI~~vr~v~~~-dleria~atGa~ 122 (178)
T 1gml_A 98 R------ANVTAIRRVRKT-DNNRIARACGAR 122 (178)
T ss_dssp H------TTCEEECCCCHH-HHHHHHHHHCCC
T ss_pred H------CCCEEEecCCHH-HHHHHHHHhCCe
Confidence 3 457777444332 234567766653
No 86
>1ofu_X SULA, hypothetical protein PA3008; bacterial cell division inhibitor, SULA protein; HET: GDP; 2.1A {Pseudomonas aeruginosa} SCOP: c.37.1.22
Probab=36.21 E-value=99 Score=22.86 Aligned_cols=44 Identities=14% Similarity=0.328 Sum_probs=34.0
Q ss_pred HHHHHHHHHhhC---CCeEEEEecCCccchHHHHHHHHHHhCCCCCCCeeec
Q 022546 78 VKSLCTAIANYC---PHALVNMISNPVNSTVPIAAEVFKKAGTYDEKKLFGV 126 (295)
Q Consensus 78 ~~~i~~~i~~~~---p~a~viv~tNP~d~~t~~~~~~~k~sg~~~~~kviG~ 126 (295)
.+-+.+.+.+.+ .+.|++.++.|-...... +...| ++++|++=+
T Consensus 17 ~~lLlp~L~~l~~~~~~r~ilwi~pp~~~~~~~----L~~~G-l~~~rll~v 63 (119)
T 1ofu_X 17 LTLLAPILRELSEEQDARWLTLIAPPASLTHEW----LRRAG-LNRERILLL 63 (119)
T ss_dssp HHHHHHHHHHHTTCSSSSEEEEESCCTTSCHHH----HHHTT-CCTTSEEEE
T ss_pred HHHHHHHHHHhcccccCccEEEECCCCCCCHHH----HHHcC-CChHHEEEE
Confidence 344566677765 678999999888777665 46788 999999998
No 87
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=35.57 E-value=71 Score=27.61 Aligned_cols=61 Identities=18% Similarity=0.203 Sum_probs=39.4
Q ss_pred CchhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEecCCccchHHHHHHHHHHhCCCC
Q 022546 41 EQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIANY-CPHALVNMISNPVNSTVPIAAEVFKKAGTYD 119 (295)
Q Consensus 41 ~d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~-~p~a~viv~tNP~d~~t~~~~~~~k~sg~~~ 119 (295)
+|. ++++++|+||++.... .++++.+.+..+ .|+.+++.++|..+....+ .+. +|
T Consensus 79 ~~~-~~~~~~D~vilavk~~----------------~~~~~l~~l~~~l~~~~~iv~~~nGi~~~~~l----~~~---~~ 134 (318)
T 3hwr_A 79 SDP-SAVQGADLVLFCVKST----------------DTQSAALAMKPALAKSALVLSLQNGVENADTL----RSL---LE 134 (318)
T ss_dssp SCG-GGGTTCSEEEECCCGG----------------GHHHHHHHHTTTSCTTCEEEEECSSSSHHHHH----HHH---CC
T ss_pred CCH-HHcCCCCEEEEEcccc----------------cHHHHHHHHHHhcCCCCEEEEeCCCCCcHHHH----HHH---cC
Confidence 344 5579999999975322 124455556655 4788899999999876433 232 66
Q ss_pred CCCeeec
Q 022546 120 EKKLFGV 126 (295)
Q Consensus 120 ~~kviG~ 126 (295)
+++++-
T Consensus 135 -~~vl~g 140 (318)
T 3hwr_A 135 -QEVAAA 140 (318)
T ss_dssp -SEEEEE
T ss_pred -CcEEEE
Confidence 677753
No 88
>2h1q_A Hypothetical protein; ZP_00559375.1, structural genomics, PSI-2, protein structure initiative; 2.01A {Desulfitobacterium hafniense dcb-2} PDB: 3l5o_A
Probab=35.20 E-value=23 Score=30.54 Aligned_cols=76 Identities=21% Similarity=0.255 Sum_probs=45.3
Q ss_pred hhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCccchHHHHHHHHHHhCCCCCCCe
Q 022546 44 GKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIANYCPHALVNMISNPVNSTVPIAAEVFKKAGTYDEKKL 123 (295)
Q Consensus 44 ~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~k~sg~~~~~kv 123 (295)
++.+..||+|++|+. .++..+++ .+-+.++++..+++.-|...+++.+ ++ .| + .-+
T Consensus 181 e~ll~~aD~viiTGs----------TlvN~Ti~-------~lL~~~~~a~~vvl~GPS~p~~P~l---f~-~G-v--~~l 236 (270)
T 2h1q_A 181 EFILPECDYVYITCA----------SVVDKTLP-------RLLELSRNARRITLVGPGTPLAPVL---FE-HG-L--QEL 236 (270)
T ss_dssp HHHGGGCSEEEEETH----------HHHHTCHH-------HHHHHTTTSSEEEEESTTCCCCGGG---GG-TT-C--SEE
T ss_pred HHHhhcCCEEEEEee----------eeecCCHH-------HHHHhCccCCeEEEEecChhhhHHH---Hh-cC-c--CEE
Confidence 456899999999863 24444444 3445555663444445555666533 43 45 3 334
Q ss_pred eecchhhHHHHHHHHHhhcC
Q 022546 124 FGVTTLDVVRAKTFYAGKVN 143 (295)
Q Consensus 124 iG~t~ld~~R~~~~la~~l~ 143 (295)
-|+-..|..++...+++--+
T Consensus 237 ~G~~V~D~~~~~~~i~~Ggg 256 (270)
T 2h1q_A 237 SGFMVKDNARAFRIVAGAEK 256 (270)
T ss_dssp EEEEESCHHHHHHHHTTSSC
T ss_pred EEeEecCHHHHHHHHHcCCC
Confidence 45567788888888766543
No 89
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=34.76 E-value=93 Score=26.22 Aligned_cols=57 Identities=12% Similarity=0.139 Sum_probs=34.9
Q ss_pred hhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEecCCccchHHHHHHHHHHhCCCCCCCe
Q 022546 45 KALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIANY-CPHALVNMISNPVNSTVPIAAEVFKKAGTYDEKKL 123 (295)
Q Consensus 45 ~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~-~p~a~viv~tNP~d~~t~~~~~~~k~sg~~~~~kv 123 (295)
++++++|+||++.... .++++.+.+..+ .|+.+++.++|..+....+ ...+++.++
T Consensus 70 ~~~~~~d~vi~~v~~~----------------~~~~v~~~l~~~l~~~~~iv~~~~g~~~~~~l-------~~~~~~~~v 126 (316)
T 2ew2_A 70 HQNEQVDLIIALTKAQ----------------QLDAMFKAIQPMITEKTYVLCLLNGLGHEDVL-------EKYVPKENI 126 (316)
T ss_dssp TTSCCCSEEEECSCHH----------------HHHHHHHHHGGGCCTTCEEEECCSSSCTHHHH-------TTTSCGGGE
T ss_pred ccCCCCCEEEEEeccc----------------cHHHHHHHHHHhcCCCCEEEEecCCCCcHHHH-------HHHcCCccE
Confidence 3445999999975311 134555566665 4678888889987743221 122566677
Q ss_pred e
Q 022546 124 F 124 (295)
Q Consensus 124 i 124 (295)
+
T Consensus 127 i 127 (316)
T 2ew2_A 127 L 127 (316)
T ss_dssp E
T ss_pred E
Confidence 7
No 90
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=34.75 E-value=27 Score=32.57 Aligned_cols=52 Identities=17% Similarity=0.233 Sum_probs=30.2
Q ss_pred CCchhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEe
Q 022546 40 EEQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIANYC-PHALVNMI 97 (295)
Q Consensus 40 t~d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~-p~a~viv~ 97 (295)
++|+.+++++||+||++...|...+.+ -+...++++++.|.++. |+.+|++-
T Consensus 75 ttd~~~a~~~aDvviiaVptp~~~~~~------~dl~~v~~v~~~i~~~l~~~~iVV~~ 127 (478)
T 2y0c_A 75 STDIEAAVAHGDVQFIAVGTPPDEDGS------ADLQYVLAAARNIGRYMTGFKVIVDK 127 (478)
T ss_dssp ECCHHHHHHHCSEEEECCCCCBCTTSS------BCCHHHHHHHHHHHHHCCSCEEEEEC
T ss_pred ECCHHHHhhcCCEEEEEeCCCcccCCC------ccHHHHHHHHHHHHHhcCCCCEEEEe
Confidence 356777899999999987666432211 12233444445555554 45555544
No 91
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=34.05 E-value=39 Score=27.55 Aligned_cols=42 Identities=21% Similarity=0.233 Sum_probs=28.3
Q ss_pred hhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCcc
Q 022546 44 GKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIANYCPHALVNMISNPVN 102 (295)
Q Consensus 44 ~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~viv~tNP~d 102 (295)
.++++++|+||++.. + ..+.++.+.+.. .++.+++.++||.+
T Consensus 76 ~~~~~~aDvVilavp----~------------~~~~~v~~~l~~-~~~~ivi~~~~g~~ 117 (220)
T 4huj_A 76 LKDALQADVVILAVP----Y------------DSIADIVTQVSD-WGGQIVVDASNAID 117 (220)
T ss_dssp HHHHTTSSEEEEESC----G------------GGHHHHHTTCSC-CTTCEEEECCCCBC
T ss_pred HHHHhcCCEEEEeCC----h------------HHHHHHHHHhhc-cCCCEEEEcCCCCC
Confidence 467899999999752 1 223344444544 45678999999985
No 92
>3l5o_A Uncharacterized protein from DUF364 family; RARE metals, siderophores, adenosyl binding site; 2.01A {Desulfitobacterium hafniense}
Probab=33.99 E-value=23 Score=30.51 Aligned_cols=73 Identities=22% Similarity=0.338 Sum_probs=45.3
Q ss_pred hhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCe-EEEEecCCccchHHHHHHHHHHhCCCCCCC
Q 022546 44 GKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIANYCPHA-LVNMISNPVNSTVPIAAEVFKKAGTYDEKK 122 (295)
Q Consensus 44 ~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a-~viv~tNP~d~~t~~~~~~~k~sg~~~~~k 122 (295)
+..+..||+|++|+. .++. .-.+.+-+.+.++ .+++++ |.-.+.+.+ ++ .| + .-
T Consensus 181 ~~~lp~~D~viiTgs----------tlvN-------~Tl~~lL~~~~~a~~vvl~G-PStp~~P~l---f~-~G-v--~~ 235 (270)
T 3l5o_A 181 EFILPECDYVYITCA----------SVVD-------KTLPRLLELSRNARRITLVG-PGTPLAPVL---FE-HG-L--QE 235 (270)
T ss_dssp HHHGGGCSEEEEETH----------HHHH-------TCHHHHHHHTTTSSEEEEES-TTCCCCGGG---GG-TT-C--SE
T ss_pred HHhhccCCEEEEEee----------hhhc-------CCHHHHHhhCCCCCEEEEEC-CCchhhHHH---Hh-cC-c--CE
Confidence 457899999999863 2333 3344555666666 455554 666666643 44 34 3 33
Q ss_pred eeecchhhHHHHHHHHHhh
Q 022546 123 LFGVTTLDVVRAKTFYAGK 141 (295)
Q Consensus 123 viG~t~ld~~R~~~~la~~ 141 (295)
+-|+-..|..++.+.+++-
T Consensus 236 laG~~V~d~~~~~~~i~~G 254 (270)
T 3l5o_A 236 LSGFMVKDNARAFRIVAGA 254 (270)
T ss_dssp EEEEEESCHHHHHHHHTTS
T ss_pred EEEEEEcCHHHHHHHHhcC
Confidence 4445678888888888654
No 93
>4h31_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PE5; 1.70A {Vibrio vulnificus} PDB: 3upd_A*
Probab=33.36 E-value=34 Score=30.76 Aligned_cols=16 Identities=19% Similarity=0.482 Sum_probs=13.6
Q ss_pred CchhhhcCCCcEEEEc
Q 022546 41 EQLGKALEGSDVVIIP 56 (295)
Q Consensus 41 ~d~~~al~daDiVvi~ 56 (295)
+|+.+++++||+|...
T Consensus 242 ~d~~eav~~aDvvyt~ 257 (358)
T 4h31_A 242 ENVAEGVQGCDFLYTD 257 (358)
T ss_dssp SCHHHHHTTCSEEEEC
T ss_pred cCHHHHhccCcEEEEE
Confidence 5789999999998853
No 94
>2b0j_A 5,10-methenyltetrahydromethanopterin hydrogenase; rossmann fold, helix bundle, oxidoreductase; 1.75A {Methanocaldococcus jannaschii} SCOP: a.100.1.11 c.2.1.6 PDB: 3f47_A* 3daf_A* 3dag_A* 3f46_A* 3h65_A*
Probab=33.16 E-value=30 Score=30.39 Aligned_cols=60 Identities=27% Similarity=0.422 Sum_probs=34.4
Q ss_pred EEEeeCCCchhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCccchHHHHHHHHH
Q 022546 34 VEGYAGEEQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIANYCPHALVNMISNPVNSTVPIAAEVFK 113 (295)
Q Consensus 34 v~~~~~t~d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~k 113 (295)
++.+ ++| .||.+++|++|+-- ..| .++..|++++++.+.+ +|+ ++|-|-+=+..++..++
T Consensus 129 VkVt--sDD-~EAvk~AEi~Ilft----PfG-------~~t~~Iakkii~~lpE---gAI---I~nTCTipp~~ly~~le 188 (358)
T 2b0j_A 129 LKVT--SDD-REAVEGADIVITWL----PKG-------NKQPDIIKKFADAIPE---GAI---VTHACTIPTTKFAKIFK 188 (358)
T ss_dssp CEEE--SCH-HHHHTTCSEEEECC----TTC-------TTHHHHHHHHGGGSCT---TCE---EEECSSSCHHHHHHHHH
T ss_pred cEee--cch-HHHhcCCCEEEEec----CCC-------CCcHHHHHHHHhhCcC---CCE---EecccCCCHHHHHHHHH
Confidence 4443 356 59999999999842 112 3446777777766643 343 45555544444433333
No 95
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=33.02 E-value=80 Score=26.65 Aligned_cols=40 Identities=13% Similarity=0.150 Sum_probs=24.7
Q ss_pred CeEEEEeCCC-chhHHHhhhCCCCCCeEEEeeCCCchhhhcCCCcEEEEcC
Q 022546 8 SSLSLYDIAN-TPGVAADVSHINSPAQVEGYAGEEQLGKALEGSDVVIIPA 57 (295)
Q Consensus 8 ~ei~L~D~~~-~~~~~~Dl~~~~~~~~v~~~~~t~d~~~al~daDiVvi~~ 57 (295)
-+++++|+++ ......+ . .+.. ++++.+++++||+||++.
T Consensus 25 ~~V~~~dr~~~~~~~~~~---~----g~~~---~~~~~~~~~~aDvvi~~v 65 (287)
T 3pef_A 25 CSVTIWNRSPEKAEELAA---L----GAER---AATPCEVVESCPVTFAML 65 (287)
T ss_dssp CEEEEECSSGGGGHHHHH---T----TCEE---CSSHHHHHHHCSEEEECC
T ss_pred CeEEEEcCCHHHHHHHHH---C----CCee---cCCHHHHHhcCCEEEEEc
Confidence 3788999876 2222221 1 1122 245678899999999975
No 96
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=32.95 E-value=38 Score=33.48 Aligned_cols=46 Identities=20% Similarity=0.380 Sum_probs=28.1
Q ss_pred CchhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCCccc
Q 022546 41 EQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIANYC-PHALVNMISNPVNS 103 (295)
Q Consensus 41 ~d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~-p~a~viv~tNP~d~ 103 (295)
+|+ +++++||+||.+... +..+.+++...+.++. |++++ +||...+
T Consensus 384 ~d~-~~~~~aDlVIeaVpe--------------~~~vk~~v~~~l~~~~~~~~Il--asntStl 430 (725)
T 2wtb_A 384 LDY-ESFRDVDMVIEAVIE--------------NISLKQQIFADLEKYCPQHCIL--ASNTSTI 430 (725)
T ss_dssp SSS-GGGTTCSEEEECCCS--------------CHHHHHHHHHHHHHHSCTTCEE--EECCSSS
T ss_pred CCH-HHHCCCCEEEEcCcC--------------CHHHHHHHHHHHHhhCCCCcEE--EeCCCCC
Confidence 455 789999999997521 1233444555666666 55543 5665543
No 97
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=32.88 E-value=62 Score=27.68 Aligned_cols=58 Identities=19% Similarity=0.157 Sum_probs=35.6
Q ss_pred chhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCC
Q 022546 42 QLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIANYCPHALVNMISNP 100 (295)
Q Consensus 42 d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~viv~tNP 100 (295)
++.++++++|+||-+++..........+.+..|+.-...+++.+.+.+. ..+|.+|..
T Consensus 70 ~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~~v~~SS~ 127 (342)
T 2x4g_A 70 GLERALRGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQARV-PRILYVGSA 127 (342)
T ss_dssp HHHHHTTTCSEEEEC------------CHHHHHHHHHHHHHHHHHHHTC-SCEEEECCG
T ss_pred HHHHHHcCCCEEEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHcCC-CeEEEECCH
Confidence 3457789999999988854322234455778899999999999988753 346666653
No 98
>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2
Probab=32.54 E-value=1.1e+02 Score=25.44 Aligned_cols=55 Identities=11% Similarity=0.022 Sum_probs=40.5
Q ss_pred hhhhcCC-----CcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEecC
Q 022546 43 LGKALEG-----SDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIANYCPHALVNMISN 99 (295)
Q Consensus 43 ~~~al~d-----aDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~viv~tN 99 (295)
+.+++++ +|+||-+++.......+..+.+..|+.-...+++.+.+.+. .+|.+|.
T Consensus 57 ~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~--~~v~~SS 116 (310)
T 1eq2_A 57 LIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI--PFLYASS 116 (310)
T ss_dssp HHHHHTTCCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC--CEEEEEE
T ss_pred HHHHHhccccCCCcEEEECcccccCcccCHHHHHHHHHHHHHHHHHHHHHcCC--eEEEEee
Confidence 4455664 99999998865433345677888999999999999988765 5666654
No 99
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=32.42 E-value=67 Score=27.91 Aligned_cols=55 Identities=15% Similarity=0.051 Sum_probs=41.1
Q ss_pred hhhh-cCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEecC
Q 022546 43 LGKA-LEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIANYCPHALVNMISN 99 (295)
Q Consensus 43 ~~~a-l~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~viv~tN 99 (295)
+.++ ..++|+||-+++............+..|+.-...+++.+++.+.. +|.+|.
T Consensus 83 ~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~--~V~~SS 138 (362)
T 3sxp_A 83 LRRLEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAK--VIYASS 138 (362)
T ss_dssp HHHHTTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCE--EEEEEE
T ss_pred HHHhhccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCc--EEEeCc
Confidence 3344 689999999998654334567778899999999999999887644 565554
No 100
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A*
Probab=32.16 E-value=17 Score=35.95 Aligned_cols=59 Identities=19% Similarity=0.274 Sum_probs=36.2
Q ss_pred hcCCCcEEEEcCCCCCCCCCCHH----H--HHHHHHHHHHHHHHHHHhhCCCeE-EEEecCCccch
Q 022546 46 ALEGSDVVIIPAGVPRKPGMTRD----D--LFNINAGIVKSLCTAIANYCPHAL-VNMISNPVNST 104 (295)
Q Consensus 46 al~daDiVvi~~g~~~~~g~~r~----~--~~~~n~~i~~~i~~~i~~~~p~a~-viv~tNP~d~~ 104 (295)
+.++||+||++.|.+..+|.+|. + +-......++.+++...+.+++.+ |++.++|.++-
T Consensus 441 ~a~~aDvvIv~vg~~~gEg~Dr~~~~~~l~Lp~~q~~LI~~v~~~~~~~~~~vVVVl~~g~P~~l~ 506 (721)
T 2x41_A 441 LAKKNDVAVIVISRISGEGYDRKPVKGDFYLSDDETDLIKTVSREFHEQGKKVIVLLNIGSPVEVV 506 (721)
T ss_dssp HHHHCSEEEEEEECCCBTTCCCCSSBTTTBCCHHHHHHHHHHHHHHHHTTCCEEEEEECSSCCCCT
T ss_pred HHhcCCEEEEEEeccccccccccCCCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCCceEcc
Confidence 44789999998776644454443 2 222333455555544447777766 45579999874
No 101
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=32.00 E-value=1.6e+02 Score=24.61 Aligned_cols=113 Identities=15% Similarity=0.108 Sum_probs=63.3
Q ss_pred chhhhcCCCcEEEEcCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCccchHHHHHH-HHHHhCCC
Q 022546 42 QLGKALEGSDVVIIPAGVPRK--PGMTRDDLFNINAGIVKSLCTAIANYCPHALVNMISNPVNSTVPIAAE-VFKKAGTY 118 (295)
Q Consensus 42 d~~~al~daDiVvi~~g~~~~--~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~-~~k~sg~~ 118 (295)
++.++++++|+||-+++.+.. ........+..|+.-...+++.+.+.+.. .+|.+|.-. +...--.. +-...+ .
T Consensus 56 ~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~iv~~SS~~-vyg~~~~~~~~E~~~-~ 132 (313)
T 3ehe_A 56 DIKDYLKGAEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVS-RIVFTSTST-VYGEAKVIPTPEDYP-T 132 (313)
T ss_dssp CCHHHHTTCSEEEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCC-EEEEECCGG-GGCSCSSSSBCTTSC-C
T ss_pred HHHHHhcCCCEEEECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCC-eEEEeCchH-HhCcCCCCCCCCCCC-C
Confidence 456788999999998885422 22456778889999999999999887643 566666421 00000000 000011 2
Q ss_pred CCCCeeecchhhHHHHHHHHHhhcCCCCccce-EEEeeCC
Q 022546 119 DEKKLFGVTTLDVVRAKTFYAGKVNVPVAEVN-VPVIGGH 157 (295)
Q Consensus 119 ~~~kviG~t~ld~~R~~~~la~~l~v~~~~v~-~~viG~h 157 (295)
++....|.+-....++-..+++.+|++..-++ +.++|..
T Consensus 133 ~~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~ 172 (313)
T 3ehe_A 133 HPISLYGASKLACEALIESYCHTFDMQAWIYRFANVIGRR 172 (313)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHTTCEEEEEECSCEESTT
T ss_pred CCCCHHHHHHHHHHHHHHHHHHhcCCCEEEEeeccccCcC
Confidence 22233333333334445556666776655555 4566654
No 102
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=31.72 E-value=42 Score=28.39 Aligned_cols=69 Identities=10% Similarity=0.147 Sum_probs=38.3
Q ss_pred CeEEEEeCCC-chhHHHhhhCCCCCCeEEEeeCCCchhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 022546 8 SSLSLYDIAN-TPGVAADVSHINSPAQVEGYAGEEQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIA 86 (295)
Q Consensus 8 ~ei~L~D~~~-~~~~~~Dl~~~~~~~~v~~~~~t~d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~i~~~i~ 86 (295)
.+++++|.++ ....+.+ ..... .. +.++.+++++||+||++.... .++++.+.+.
T Consensus 32 ~~V~~~d~~~~~~~~~~~---~g~~~--~~---~~~~~~~~~~aDvVilavp~~----------------~~~~v~~~l~ 87 (290)
T 3b1f_A 32 YKIVGYNRSDRSRDIALE---RGIVD--EA---TADFKVFAALADVIILAVPIK----------------KTIDFIKILA 87 (290)
T ss_dssp SEEEEECSSHHHHHHHHH---TTSCS--EE---ESCTTTTGGGCSEEEECSCHH----------------HHHHHHHHHH
T ss_pred cEEEEEcCCHHHHHHHHH---cCCcc--cc---cCCHHHhhcCCCEEEEcCCHH----------------HHHHHHHHHH
Confidence 4788999865 2112222 11111 11 134567789999999975311 1245555565
Q ss_pred hh--CCCeEEEEecCC
Q 022546 87 NY--CPHALVNMISNP 100 (295)
Q Consensus 87 ~~--~p~a~viv~tNP 100 (295)
.+ .|+.+++.++|-
T Consensus 88 ~~~l~~~~ivi~~~~~ 103 (290)
T 3b1f_A 88 DLDLKEDVIITDAGST 103 (290)
T ss_dssp TSCCCTTCEEECCCSC
T ss_pred hcCCCCCCEEEECCCC
Confidence 54 467777766664
No 103
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=31.65 E-value=50 Score=26.30 Aligned_cols=48 Identities=21% Similarity=0.244 Sum_probs=34.9
Q ss_pred hhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEecC
Q 022546 45 KALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIANYCPHALVNMISN 99 (295)
Q Consensus 45 ~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~viv~tN 99 (295)
+++.++|+||.+++....+.. ...|....+.+++.+++.+ ..++++|.
T Consensus 58 ~~~~~~d~vi~~ag~~~~~~~-----~~~n~~~~~~l~~a~~~~~--~~~v~~SS 105 (224)
T 3h2s_A 58 ADLDSVDAVVDALSVPWGSGR-----GYLHLDFATHLVSLLRNSD--TLAVFILG 105 (224)
T ss_dssp HHHTTCSEEEECCCCCTTSSC-----THHHHHHHHHHHHTCTTCC--CEEEEECC
T ss_pred hhcccCCEEEECCccCCCcch-----hhHHHHHHHHHHHHHHHcC--CcEEEEec
Confidence 678999999999887532222 2458888888888888776 56676653
No 104
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=31.58 E-value=44 Score=26.74 Aligned_cols=53 Identities=11% Similarity=0.192 Sum_probs=36.0
Q ss_pred chhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEecC
Q 022546 42 QLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIANYCPHALVNMISN 99 (295)
Q Consensus 42 d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~viv~tN 99 (295)
++.++++++|+||.+++... +..+.+..|+...+.+++.+.+.+.+ .+|.+|.
T Consensus 60 ~~~~~~~~~d~vi~~a~~~~----~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~Ss 112 (227)
T 3dhn_A 60 EVCEVCKGADAVISAFNPGW----NNPDIYDETIKVYLTIIDGVKKAGVN-RFLMVGG 112 (227)
T ss_dssp HHHHHHTTCSEEEECCCC----------CCSHHHHHHHHHHHHHHHTTCS-EEEEECC
T ss_pred HHHHHhcCCCEEEEeCcCCC----CChhHHHHHHHHHHHHHHHHHHhCCC-EEEEeCC
Confidence 45678999999999887542 12235667888899999999887654 4555553
No 105
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=31.25 E-value=29 Score=28.83 Aligned_cols=69 Identities=12% Similarity=0.216 Sum_probs=37.8
Q ss_pred CeEEEEeCCC--chhHHHhhhCCCCCCeEEEeeCCCchhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 022546 8 SSLSLYDIAN--TPGVAADVSHINSPAQVEGYAGEEQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAI 85 (295)
Q Consensus 8 ~ei~L~D~~~--~~~~~~Dl~~~~~~~~v~~~~~t~d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~i~~~i 85 (295)
.+++++|+++ ++....++ .+.. +.+..+++++||+||++.. + . .++++.+.+
T Consensus 30 ~~V~~~~r~~~~~~~~~~~~-------g~~~---~~~~~e~~~~aDvVilav~-~---~------------~~~~v~~~l 83 (247)
T 3gt0_A 30 NQIICSDLNTANLKNASEKY-------GLTT---TTDNNEVAKNADILILSIK-P---D------------LYASIINEI 83 (247)
T ss_dssp GGEEEECSCHHHHHHHHHHH-------CCEE---CSCHHHHHHHCSEEEECSC-T---T------------THHHHC---
T ss_pred CeEEEEeCCHHHHHHHHHHh-------CCEE---eCChHHHHHhCCEEEEEeC-H---H------------HHHHHHHHH
Confidence 4889999875 22221111 1122 2345788899999999761 2 1 134444556
Q ss_pred HhhC-CCeEEEEecCCcc
Q 022546 86 ANYC-PHALVNMISNPVN 102 (295)
Q Consensus 86 ~~~~-p~a~viv~tNP~d 102 (295)
..+. |+.+++..++-+.
T Consensus 84 ~~~l~~~~~vvs~~~gi~ 101 (247)
T 3gt0_A 84 KEIIKNDAIIVTIAAGKS 101 (247)
T ss_dssp CCSSCTTCEEEECSCCSC
T ss_pred HhhcCCCCEEEEecCCCC
Confidence 5554 5666666666655
No 106
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=30.94 E-value=78 Score=27.04 Aligned_cols=59 Identities=15% Similarity=0.088 Sum_probs=37.2
Q ss_pred chhhhcCCCcEEEEcCCCCCCCCCC-HHHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCC
Q 022546 42 QLGKALEGSDVVIIPAGVPRKPGMT-RDDLFNINAGIVKSLCTAIANYCPHALVNMISNP 100 (295)
Q Consensus 42 d~~~al~daDiVvi~~g~~~~~g~~-r~~~~~~n~~i~~~i~~~i~~~~p~a~viv~tNP 100 (295)
++.++++++|+||-+++.......+ ..+.+..|+.-...+.+.+.+.+.-..+|.+|-.
T Consensus 73 ~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~ 132 (338)
T 2rh8_A 73 SFEAPIAGCDFVFHVATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSA 132 (338)
T ss_dssp SSHHHHTTCSEEEEESSCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCH
T ss_pred HHHHHHcCCCEEEEeCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecH
Confidence 4557889999999987643111111 2336778999999999988876423467777654
No 107
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=30.62 E-value=57 Score=28.94 Aligned_cols=46 Identities=15% Similarity=0.231 Sum_probs=31.9
Q ss_pred CchhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHh----h-CCCeEEEEecCCcc
Q 022546 41 EQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIAN----Y-CPHALVNMISNPVN 102 (295)
Q Consensus 41 ~d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~i~~~i~~----~-~p~a~viv~tNP~d 102 (295)
+|+.+++++||+||++... ..++++.+.+.. + .|+.+++.++|-.+
T Consensus 95 ~~~~ea~~~aDvVilav~~----------------~~~~~vl~~i~~~~~~~l~~~~ivvs~~~Gi~ 145 (375)
T 1yj8_A 95 SDLASVINDADLLIFIVPC----------------QYLESVLASIKESESIKIASHAKAISLTKGFI 145 (375)
T ss_dssp SSTHHHHTTCSEEEECCCH----------------HHHHHHHHHHTC---CCCCTTCEEEECCCSCE
T ss_pred CCHHHHHcCCCEEEEcCCH----------------HHHHHHHHHHhhhhhccCCCCCEEEEeCCccc
Confidence 4556789999999997421 245566667765 4 36788888888644
No 108
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=30.54 E-value=71 Score=27.02 Aligned_cols=112 Identities=15% Similarity=0.108 Sum_probs=60.4
Q ss_pred chhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCccchHHHHHH-HHHHhCCCCC
Q 022546 42 QLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIANYCPHALVNMISNPVNSTVPIAAE-VFKKAGTYDE 120 (295)
Q Consensus 42 d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~-~~k~sg~~~~ 120 (295)
++.++++++|+||-+++..... ...+....|+.-.+.+++.+.+.+.+ .+|.+|. ..+...--.. +-..+. ..+
T Consensus 55 ~~~~~~~~~d~Vih~a~~~~~~--~~~~~~~~n~~~~~~ll~a~~~~~~~-r~v~~SS-~~vyg~~~~~~~~E~~~-~~p 129 (311)
T 3m2p_A 55 DLINQLNDVDAVVHLAATRGSQ--GKISEFHDNEILTQNLYDACYENNIS-NIVYAST-ISAYSDETSLPWNEKEL-PLP 129 (311)
T ss_dssp HHHHHTTTCSEEEECCCCCCSS--SCGGGTHHHHHHHHHHHHHHHHTTCC-EEEEEEE-GGGCCCGGGCSBCTTSC-CCC
T ss_pred HHHHhhcCCCEEEEccccCCCC--ChHHHHHHHHHHHHHHHHHHHHcCCC-EEEEEcc-HHHhCCCCCCCCCCCCC-CCC
Confidence 4567899999999988765322 33446678888899999999887754 3555543 1110000000 000001 112
Q ss_pred CCeeecchhhHHHHHHHHHhhcCCCCccce-EEEeeCCC
Q 022546 121 KKLFGVTTLDVVRAKTFYAGKVNVPVAEVN-VPVIGGHA 158 (295)
Q Consensus 121 ~kviG~t~ld~~R~~~~la~~l~v~~~~v~-~~viG~hg 158 (295)
....|.+-....++-..+++..|++..-++ ..++|...
T Consensus 130 ~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~ 168 (311)
T 3m2p_A 130 DLMYGVSKLACEHIGNIYSRKKGLCIKNLRFAHLYGFNE 168 (311)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHSCCEEEEEEECEEECSCC
T ss_pred CchhHHHHHHHHHHHHHHHHHcCCCEEEEeeCceeCcCC
Confidence 223333333333444455556677666665 46666443
No 109
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=30.35 E-value=89 Score=25.90 Aligned_cols=43 Identities=14% Similarity=0.081 Sum_probs=27.8
Q ss_pred chhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCC
Q 022546 42 QLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIANYC-PHALVNMISNP 100 (295)
Q Consensus 42 d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~-p~a~viv~tNP 100 (295)
++.++++++|+||++.... .++++.+.+..+. |+.+++..++-
T Consensus 61 ~~~~~~~~~Dvvi~av~~~----------------~~~~v~~~l~~~~~~~~ivv~~s~~ 104 (266)
T 3d1l_A 61 DLAEVNPYAKLYIVSLKDS----------------AFAELLQGIVEGKREEALMVHTAGS 104 (266)
T ss_dssp CGGGSCSCCSEEEECCCHH----------------HHHHHHHHHHTTCCTTCEEEECCTT
T ss_pred CHHHHhcCCCEEEEecCHH----------------HHHHHHHHHHhhcCCCcEEEECCCC
Confidence 4567789999999974211 1244555565554 67788888763
No 110
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=30.21 E-value=1.5e+02 Score=24.25 Aligned_cols=54 Identities=19% Similarity=0.156 Sum_probs=39.4
Q ss_pred hhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEecC
Q 022546 43 LGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIANYCPHALVNMISN 99 (295)
Q Consensus 43 ~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~viv~tN 99 (295)
+.++++++|+||-+++.. ........+..|+.-...+++.+.+.+. ..+|.+|.
T Consensus 57 ~~~~~~~~d~vi~~a~~~--~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~iv~~SS 110 (267)
T 3ay3_A 57 VHDLVKDCDGIIHLGGVS--VERPWNDILQANIIGAYNLYEAARNLGK-PRIVFASS 110 (267)
T ss_dssp HHHHHTTCSEEEECCSCC--SCCCHHHHHHHTHHHHHHHHHHHHHTTC-CEEEEEEE
T ss_pred HHHHHcCCCEEEECCcCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCC-CEEEEeCC
Confidence 456788999999998765 2334566778899988999998887653 35666654
No 111
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=30.01 E-value=62 Score=28.75 Aligned_cols=49 Identities=16% Similarity=0.293 Sum_probs=31.8
Q ss_pred CcCeEEEEeCCC--chhHHHhhhCCCCCCeEEEeeCCCchhhhcCCCcEEEEcCC
Q 022546 6 LVSSLSLYDIAN--TPGVAADVSHINSPAQVEGYAGEEQLGKALEGSDVVIIPAG 58 (295)
Q Consensus 6 ~~~ei~L~D~~~--~~~~~~Dl~~~~~~~~v~~~~~t~d~~~al~daDiVvi~~g 58 (295)
-+.++.++|.+. ++..+.++... ....+... .++++++++||+|+++-.
T Consensus 153 ~~~~V~V~~r~~~~a~~la~~~~~~-~g~~~~~~---~~~~eav~~aDiVi~aTp 203 (350)
T 1x7d_A 153 GIEEIVAYDTDPLATAKLIANLKEY-SGLTIRRA---SSVAEAVKGVDIITTVTA 203 (350)
T ss_dssp CCCEEEEECSSHHHHHHHHHHHTTC-TTCEEEEC---SSHHHHHTTCSEEEECCC
T ss_pred CCcEEEEEcCCHHHHHHHHHHHHhc-cCceEEEe---CCHHHHHhcCCEEEEecc
Confidence 367899999876 45555555432 12233332 457789999999999654
No 112
>2hsj_A Putative platelet activating factor; structr genomics, structural genomics, PSI-2; HET: MSE; 1.50A {Streptococcus pneumoniae} SCOP: c.23.10.3
Probab=29.90 E-value=1.6e+02 Score=22.94 Aligned_cols=48 Identities=10% Similarity=0.174 Sum_probs=31.1
Q ss_pred CCcEEEEcCCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCC
Q 022546 49 GSDVVIIPAGVPR-KPGMTRDDLFNINAGIVKSLCTAIANYCPHALVNMISNP 100 (295)
Q Consensus 49 daDiVvi~~g~~~-~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~viv~tNP 100 (295)
+.|+|++..|..- ..+.+. +. -..-+++++..+++.+|++.+++++.|
T Consensus 85 ~pd~vvi~~G~ND~~~~~~~-~~---~~~~l~~~i~~l~~~~p~~~iil~~~~ 133 (214)
T 2hsj_A 85 AVDKIFLLIGTNDIGKDVPV-NE---ALNNLEAIIQSVARDYPLTEIKLLSIL 133 (214)
T ss_dssp CCCEEEEECCHHHHHTTCCH-HH---HHHHHHHHHHHHHHHCTTCEEEEECCC
T ss_pred CCCEEEEEEecCcCCcCCCH-HH---HHHHHHHHHHHHHHhCCCCeEEEEecC
Confidence 5789999776321 112222 22 234577888888888999988888755
No 113
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=29.69 E-value=38 Score=31.30 Aligned_cols=66 Identities=17% Similarity=0.223 Sum_probs=36.2
Q ss_pred CchhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEe-cCCccchHHH
Q 022546 41 EQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIANYC-PHALVNMI-SNPVNSTVPI 107 (295)
Q Consensus 41 ~d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~-p~a~viv~-tNP~d~~t~~ 107 (295)
+|+.+++++||+||++...|......... -.-+...+.+.++.+.++. |+.+|+.. |+|.+..-.+
T Consensus 74 ~~~~e~~~~aDvViiaVptp~~~~~v~~~-~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~g~~~~l 141 (467)
T 2q3e_A 74 TNIDDAIKEADLVFISVNTPTKTYGMGKG-RAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESI 141 (467)
T ss_dssp SCHHHHHHHCSEEEECCCCCBCCSSTTTT-TSBCCHHHHHHHHHHHHTCCSEEEEEECSCCCTTHHHHH
T ss_pred CCHHHHHhcCCEEEEEcCCchhhcccccc-CCCcHHHHHHHHHHHHhhCCCCCEEEECCcCCchHHHHH
Confidence 46678899999999987655432211000 0112234445555565553 55555554 7777764333
No 114
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=29.34 E-value=37 Score=26.72 Aligned_cols=17 Identities=29% Similarity=0.532 Sum_probs=12.9
Q ss_pred hhc-CCCcEEEEcCCCCC
Q 022546 45 KAL-EGSDVVIIPAGVPR 61 (295)
Q Consensus 45 ~al-~daDiVvi~~g~~~ 61 (295)
+++ .++|+||+++|...
T Consensus 61 ~a~~~~~DlVittGG~s~ 78 (164)
T 3pzy_A 61 KAIDDDVDVILTSGGTGI 78 (164)
T ss_dssp HHHHTTCSEEEEESCCSS
T ss_pred HHHhCCCCEEEECCCCCC
Confidence 445 38999999998653
No 115
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=29.31 E-value=1.3e+02 Score=25.97 Aligned_cols=49 Identities=8% Similarity=-0.039 Sum_probs=37.2
Q ss_pred CCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEecC
Q 022546 49 GSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIANYCPHALVNMISN 99 (295)
Q Consensus 49 daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~viv~tN 99 (295)
++|+||-+++.......+..+.+..|+.-...+++.+.+.+. .+|.+|.
T Consensus 115 ~~d~Vih~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~--r~V~~SS 163 (357)
T 2x6t_A 115 DVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI--PFLYASS 163 (357)
T ss_dssp SCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC--CEEEEEE
T ss_pred CCCEEEECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHcCC--eEEEEcc
Confidence 599999998865433345677888999999999999988765 5666654
No 116
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=29.25 E-value=1.1e+02 Score=25.96 Aligned_cols=40 Identities=20% Similarity=0.339 Sum_probs=24.3
Q ss_pred eEEEEeCCCchhHHHhhhCCCCCCeEEEeeCCCchhhhcCCCcEEEEcC
Q 022546 9 SLSLYDIANTPGVAADVSHINSPAQVEGYAGEEQLGKALEGSDVVIIPA 57 (295)
Q Consensus 9 ei~L~D~~~~~~~~~Dl~~~~~~~~v~~~~~t~d~~~al~daDiVvi~~ 57 (295)
+++++|+++. .+..+... . +.. ++++.+++++||+||++.
T Consensus 28 ~V~~~d~~~~--~~~~~~~~--g--~~~---~~~~~~~~~~aDvvi~~v 67 (302)
T 2h78_A 28 LLNVFDLVQS--AVDGLVAA--G--ASA---ARSARDAVQGADVVISML 67 (302)
T ss_dssp EEEEECSSHH--HHHHHHHT--T--CEE---CSSHHHHHTTCSEEEECC
T ss_pred eEEEEcCCHH--HHHHHHHC--C--CeE---cCCHHHHHhCCCeEEEEC
Confidence 7889998651 11222221 1 122 245678899999999975
No 117
>3dc7_A Putative uncharacterized protein LP_3323; NESG LPR109 X-RAY LP_3323, structural genomics, PSI-2, prote structure initiative; 2.12A {Lactobacillus plantarum} SCOP: c.23.10.9
Probab=28.94 E-value=38 Score=27.29 Aligned_cols=51 Identities=24% Similarity=0.253 Sum_probs=31.4
Q ss_pred CCCcEEEEcCCCC-----CCCCCC---HHHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCc
Q 022546 48 EGSDVVIIPAGVP-----RKPGMT---RDDLFNINAGIVKSLCTAIANYCPHALVNMISNPV 101 (295)
Q Consensus 48 ~daDiVvi~~g~~-----~~~g~~---r~~~~~~n~~i~~~i~~~i~~~~p~a~viv~tNP~ 101 (295)
.+.|+|++..|.. ...++. ..+.+. .-++++++.+++..|++.|++++.|.
T Consensus 81 ~~pd~Vii~~G~ND~~~~~~~~~~~~~~~~~f~---~~l~~li~~l~~~~P~~~iil~~p~~ 139 (232)
T 3dc7_A 81 EDADFIAVFGGVNDYGRDQPLGQYGDCDMTTFY---GALMMLLTGLQTNWPTVPKLFISAIH 139 (232)
T ss_dssp TTCSEEEEECCHHHHHTTCCCCCTTCCSTTSHH---HHHHHHHHHHHHHCTTSCEEEEECCC
T ss_pred CCCCEEEEEEeccccccCcCCccccccchHHHH---HHHHHHHHHHHHhCCCCeEEEEeCcc
Confidence 4789999977631 111211 111222 24667788888888999888877664
No 118
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=28.38 E-value=1.4e+02 Score=21.28 Aligned_cols=79 Identities=15% Similarity=0.158 Sum_probs=41.8
Q ss_pred eEEEEeCCC--chhHHHhhhCCCCCCeEEEeeCCCchhhhc----CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHH
Q 022546 9 SLSLYDIAN--TPGVAADVSHINSPAQVEGYAGEEQLGKAL----EGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLC 82 (295)
Q Consensus 9 ei~L~D~~~--~~~~~~Dl~~~~~~~~v~~~~~t~d~~~al----~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~i~ 82 (295)
.|.++|-++ ......-|.... ..+.......+..+.+ ...|+||+-...+ +++..+ ++
T Consensus 5 ~ilivdd~~~~~~~l~~~l~~~g--~~v~~~~~~~~a~~~~~~~~~~~dlvi~d~~l~---~~~g~~-----------~~ 68 (143)
T 3jte_A 5 KILVIDDESTILQNIKFLLEIDG--NEVLTASSSTEGLRIFTENCNSIDVVITDMKMP---KLSGMD-----------IL 68 (143)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTT--CEEEEESSHHHHHHHHHHTTTTCCEEEEESCCS---SSCHHH-----------HH
T ss_pred EEEEEcCCHHHHHHHHHHHHhCC--ceEEEeCCHHHHHHHHHhCCCCCCEEEEeCCCC---CCcHHH-----------HH
Confidence 678888776 333333333322 2444332111111222 3679988855433 455543 33
Q ss_pred HHHHhhCCCeEEEEecCCccc
Q 022546 83 TAIANYCPHALVNMISNPVNS 103 (295)
Q Consensus 83 ~~i~~~~p~a~viv~tNP~d~ 103 (295)
+.+++..|+..+|++|...+.
T Consensus 69 ~~l~~~~~~~~ii~ls~~~~~ 89 (143)
T 3jte_A 69 REIKKITPHMAVIILTGHGDL 89 (143)
T ss_dssp HHHHHHCTTCEEEEEECTTCH
T ss_pred HHHHHhCCCCeEEEEECCCCH
Confidence 445556788878888877664
No 119
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=28.13 E-value=78 Score=27.52 Aligned_cols=109 Identities=18% Similarity=0.174 Sum_probs=54.2
Q ss_pred CeEEEEeCCCchhHHHhhhCCCCCCeEEEeeCCCchhhhc--CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 022546 8 SSLSLYDIANTPGVAADVSHINSPAQVEGYAGEEQLGKAL--EGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAI 85 (295)
Q Consensus 8 ~ei~L~D~~~~~~~~~Dl~~~~~~~~v~~~~~t~d~~~al--~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~i~~~i 85 (295)
-++...|.+........|... ...+. .+. +. +.+ .++|+||...|.+.... .......++++++.++ +.+
T Consensus 29 ~~V~~~D~~~~~~~~~~L~~~--gi~v~--~g~-~~-~~l~~~~~d~vV~Spgi~~~~p-~~~~a~~~gi~v~~~~-e~~ 100 (326)
T 3eag_A 29 FEVSGCDAKMYPPMSTQLEAL--GIDVY--EGF-DA-AQLDEFKADVYVIGNVAKRGMD-VVEAILNLGLPYISGP-QWL 100 (326)
T ss_dssp CEEEEEESSCCTTHHHHHHHT--TCEEE--ESC-CG-GGGGSCCCSEEEECTTCCTTCH-HHHHHHHTTCCEEEHH-HHH
T ss_pred CEEEEEcCCCCcHHHHHHHhC--CCEEE--CCC-CH-HHcCCCCCCEEEECCCcCCCCH-HHHHHHHcCCcEEeHH-HHH
Confidence 356777765421122223322 12333 232 32 445 48999999888763211 1222334455555443 222
Q ss_pred Hhh-CCCeEEEEe--cCCccchHHHHHHHHHHhCCCCCCCeee
Q 022546 86 ANY-CPHALVNMI--SNPVNSTVPIAAEVFKKAGTYDEKKLFG 125 (295)
Q Consensus 86 ~~~-~p~a~viv~--tNP~d~~t~~~~~~~k~sg~~~~~kviG 125 (295)
.++ ..+..+|-+ ||==...+.+++++++..| +++.-++|
T Consensus 101 ~~~~~~~~~~IaVTGTnGKTTTt~ll~~iL~~~g-~~~~~~~g 142 (326)
T 3eag_A 101 SENVLHHHWVLGVAGTHGKTTTASMLAWVLEYAG-LAPGFLIG 142 (326)
T ss_dssp HHHTGGGSEEEEEESSSCHHHHHHHHHHHHHHTT-CCCEEECS
T ss_pred HHHHhcCCCEEEEECCCCHHHHHHHHHHHHHHcC-CCceEEec
Confidence 221 223344545 4544477788888888888 54433344
No 120
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=28.05 E-value=2.4e+02 Score=25.50 Aligned_cols=79 Identities=15% Similarity=0.137 Sum_probs=47.8
Q ss_pred cCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEec-CCccchHHHHHHHHHHhCCCCCCCeee
Q 022546 47 LEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIANYCPHALVNMIS-NPVNSTVPIAAEVFKKAGTYDEKKLFG 125 (295)
Q Consensus 47 l~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~viv~t-NP~d~~t~~~~~~~k~sg~~~~~kviG 125 (295)
+.+||+||++.+.. ..| ..++..+++.+|+..+|+-+ ++.+.- . ++..| ...|+-
T Consensus 66 i~~A~~viv~~~~~-----------~~n----~~i~~~ar~~~p~~~Iiara~~~~~~~-~-----L~~~G---ad~Vi~ 121 (413)
T 3l9w_A 66 AAKAEVLINAIDDP-----------QTN----LQLTEMVKEHFPHLQIIARARDVDHYI-R-----LRQAG---VEKPER 121 (413)
T ss_dssp TTTCSEEEECCSSH-----------HHH----HHHHHHHHHHCTTCEEEEEESSHHHHH-H-----HHHTT---CSSCEE
T ss_pred CCccCEEEECCCCh-----------HHH----HHHHHHHHHhCCCCeEEEEECCHHHHH-H-----HHHCC---CCEEEC
Confidence 78999999975421 233 34566677788997666554 444322 1 34455 456766
Q ss_pred cchhhHHHHHHHHHhhcCCCCccc
Q 022546 126 VTTLDVVRAKTFYAGKVNVPVAEV 149 (295)
Q Consensus 126 ~t~ld~~R~~~~la~~l~v~~~~v 149 (295)
-+..-+.++-..+-..+|+++..+
T Consensus 122 ~~~~~a~~la~~~L~~lg~~~~~~ 145 (413)
T 3l9w_A 122 ETFEGALKTGRLALESLGLGPYEA 145 (413)
T ss_dssp TTHHHHHHHHHHHHHHTTCCHHHH
T ss_pred ccHHHHHHHHHHHHHHcCCCHHHH
Confidence 554445556555666777777666
No 121
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=27.67 E-value=29 Score=30.69 Aligned_cols=47 Identities=13% Similarity=0.013 Sum_probs=26.2
Q ss_pred HHHHHHHHHHhhCCCeEEEEecCCccchHHHHHHHHHH-hCCCCCCCeeec
Q 022546 77 IVKSLCTAIANYCPHALVNMISNPVNSTVPIAAEVFKK-AGTYDEKKLFGV 126 (295)
Q Consensus 77 i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~k~-sg~~~~~kviG~ 126 (295)
-++++...+++.+.+.+|+..| |.+++-.++. -.++ .| +|+++|||+
T Consensus 147 ~~~~l~~~l~~~G~~v~ivSas-~~~~v~~~a~-~~~~~yg-Ip~e~ViG~ 194 (327)
T 4as2_A 147 GQRELYNKLMENGIEVYVISAA-HEELVRMVAA-DPRYGYN-AKPENVIGV 194 (327)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEE-EHHHHHHHHT-CGGGSCC-CCGGGEEEE
T ss_pred HHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHh-hcccccC-CCHHHeEee
Confidence 3566777777767665554443 4555554431 0111 34 777777776
No 122
>1fxw_F Alpha2, platelet-activating factor acetylhydrolase IB beta subunit; alpha beta hydrolase fold; 2.10A {Bos taurus} SCOP: c.23.10.3 PDB: 1vyh_A
Probab=27.18 E-value=2.1e+02 Score=22.77 Aligned_cols=47 Identities=17% Similarity=0.239 Sum_probs=31.4
Q ss_pred CCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCC
Q 022546 49 GSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIANYCPHALVNMISNP 100 (295)
Q Consensus 49 daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~viv~tNP 100 (295)
..|+|++..|..-- |.+.. .+ ..-+++++..+++..|++.|++++-|
T Consensus 94 ~pd~vvi~~G~ND~-~~~~~-~~---~~~l~~~i~~l~~~~p~~~iil~~~~ 140 (229)
T 1fxw_F 94 KPKVIVVWVGTNNH-ENTAE-EV---AGGIEAIVQLINTRQPQAKIIVLGLL 140 (229)
T ss_dssp CCSEEEEECCTTCT-TSCHH-HH---HHHHHHHHHHHHHHCTTCEEEEECCC
T ss_pred CCCEEEEEEecCCC-CCCHH-HH---HHHHHHHHHHHHHHCCCCeEEEEeCC
Confidence 67999997775432 33322 22 34577888888888899888877643
No 123
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=26.74 E-value=1.1e+02 Score=24.26 Aligned_cols=43 Identities=21% Similarity=0.213 Sum_probs=29.8
Q ss_pred chhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEecC
Q 022546 42 QLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIANYCPHALVNMISN 99 (295)
Q Consensus 42 d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~viv~tN 99 (295)
++.++++++|+||.++|.. |.. .+.+++.+++.+. +.+|++|.
T Consensus 66 ~~~~~~~~~d~vv~~ag~~-------------n~~-~~~~~~~~~~~~~-~~iv~iSs 108 (221)
T 3r6d_A 66 XLEQAVTNAEVVFVGAMES-------------GSD-MASIVKALSRXNI-RRVIGVSM 108 (221)
T ss_dssp HHHHHHTTCSEEEESCCCC-------------HHH-HHHHHHHHHHTTC-CEEEEEEE
T ss_pred HHHHHHcCCCEEEEcCCCC-------------Chh-HHHHHHHHHhcCC-CeEEEEee
Confidence 4457889999999988743 334 7788888877654 34555543
No 124
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=26.37 E-value=1.2e+02 Score=25.40 Aligned_cols=42 Identities=24% Similarity=0.336 Sum_probs=23.8
Q ss_pred CeEEEEeCCC-chhHHHhhhCCCCCCeEEEeeCCCchhhhcC-CCcEEEEcC
Q 022546 8 SSLSLYDIAN-TPGVAADVSHINSPAQVEGYAGEEQLGKALE-GSDVVIIPA 57 (295)
Q Consensus 8 ~ei~L~D~~~-~~~~~~Dl~~~~~~~~v~~~~~t~d~~~al~-daDiVvi~~ 57 (295)
.+++++|.++ ....+.+. . ... .. ++|+.++++ +||+||++.
T Consensus 27 ~~V~~~d~~~~~~~~~~~~--g-~~~--~~---~~~~~~~~~~~aDvVilav 70 (281)
T 2g5c_A 27 GKIYGYDINPESISKAVDL--G-IID--EG---TTSIAKVEDFSPDFVMLSS 70 (281)
T ss_dssp SEEEEECSCHHHHHHHHHT--T-SCS--EE---ESCGGGGGGTCCSEEEECS
T ss_pred cEEEEEeCCHHHHHHHHHC--C-Ccc--cc---cCCHHHHhcCCCCEEEEcC
Confidence 4799999875 21222211 1 111 11 134567888 999999975
No 125
>3ueb_A Putative uncharacterized protein; alpha and beta protein (A+B), unknown function; 1.98A {Thermococcus onnurineus}
Probab=25.39 E-value=1.1e+02 Score=21.63 Aligned_cols=37 Identities=24% Similarity=0.232 Sum_probs=26.5
Q ss_pred ceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHHhhhhhcC
Q 022546 256 GADEVLGLGPLSDYEKQGLESLKPELKASIEKGIQFANRS 295 (295)
Q Consensus 256 Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~~~~~~~~~~ 295 (295)
.|.++ .+|.||++|.-.+-+.++..- ++-..+.++||
T Consensus 9 rVihI-GLPeLsEe~lieiGelaQ~~i--I~~iF~~L~rS 45 (110)
T 3ueb_A 9 RVIHI-GLPELSEEQLIEIGELAQETI--IDYVFDHLTRS 45 (110)
T ss_dssp EEEEE-ECTTSCHHHHHHHHHHHHHHH--HHHHHHHSCGG
T ss_pred eEEEe-cCCccCHHHHHHHHHHHHHHH--HHHHHHHhhhh
Confidence 34554 577999999888888877654 66666776665
No 126
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=25.25 E-value=68 Score=27.93 Aligned_cols=44 Identities=30% Similarity=0.334 Sum_probs=29.9
Q ss_pred CchhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEecCCc
Q 022546 41 EQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIANY-CPHALVNMISNPV 101 (295)
Q Consensus 41 ~d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~-~p~a~viv~tNP~ 101 (295)
+|+ +++.++|+||++... ..++++++.+..+ .|+..|+.++|..
T Consensus 63 ~~~-~~~~~~D~Vilavk~----------------~~~~~~~~~l~~~l~~~~~iv~~~nGi 107 (335)
T 3ghy_A 63 HDA-AALGEQDVVIVAVKA----------------PALESVAAGIAPLIGPGTCVVVAMNGV 107 (335)
T ss_dssp SCH-HHHCCCSEEEECCCH----------------HHHHHHHGGGSSSCCTTCEEEECCSSS
T ss_pred CCH-HHcCCCCEEEEeCCc----------------hhHHHHHHHHHhhCCCCCEEEEECCCC
Confidence 454 457999999997521 1244555566554 4788999999995
No 127
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=24.91 E-value=61 Score=27.69 Aligned_cols=57 Identities=14% Similarity=0.038 Sum_probs=40.3
Q ss_pred hhhhcCCCcEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEecC
Q 022546 43 LGKALEGSDVVIIPAGVPRKP--GMTRDDLFNINAGIVKSLCTAIANYCPHALVNMISN 99 (295)
Q Consensus 43 ~~~al~daDiVvi~~g~~~~~--g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~viv~tN 99 (295)
+.+++.++|+||-+++..... ..+..+.+..|+.-...+++.+.+.+..+.+|.+|.
T Consensus 69 ~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS 127 (336)
T 2hun_A 69 VKELVRKVDGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVST 127 (336)
T ss_dssp HHHHHHTCSEEEECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred HHHHhhCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecc
Confidence 345667899999998854210 113356778899999999999998865457777764
No 128
>2e8b_A Probable molybdopterin-guanine dinucleotide biosy protein A; putative protein, molybdenum cofactor, structural G NPPSFA; 1.61A {Aquifex aeolicus}
Probab=24.28 E-value=2.2e+02 Score=22.32 Aligned_cols=50 Identities=4% Similarity=0.042 Sum_probs=34.0
Q ss_pred CcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCc
Q 022546 50 SDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIANYCPHALVNMISNPV 101 (295)
Q Consensus 50 aDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~viv~tNP~ 101 (295)
...||.++|...+-|....-+-..+-+++....+.+.+. .+-++++ +++-
T Consensus 15 ~~~iILA~G~g~Rmg~~K~ll~i~g~pll~~~l~~l~~~-~~~i~vv-~~~~ 64 (201)
T 2e8b_A 15 NTCYVLAGGKSKRFGEDKLLYEIKGKKVIERVYETAKSV-FKEVYIV-AKDR 64 (201)
T ss_dssp CEEEEEEESSCCCCSTTHHHHHHHHHHHHHHHHHHHHTT-CSEEEEE-ESCS
T ss_pred ceEEEECCCCCccCCCCcccceECceEHHHHHHHHHHHh-CCEEEEE-eCcH
Confidence 456788888877777555444446778999999999877 5555544 4443
No 129
>1bb1_B Designed, thermostable heterotrimeric coiled coil; de novo protein design; 1.80A {Synthetic construct} SCOP: k.7.1.1
Probab=23.96 E-value=1e+02 Score=17.07 Aligned_cols=22 Identities=18% Similarity=0.122 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh
Q 022546 268 DYEKQGLESLKPELKASIEKGI 289 (295)
Q Consensus 268 ~~E~~~l~~s~~~l~~~~~~~~ 289 (295)
.+|+..+++-.+.+++++...-
T Consensus 8 keeqaaieeeiqaikeeiaaik 29 (36)
T 1bb1_B 8 KEEQAAIEEEIQAIKEEIAAIK 29 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 5788889999999998876543
No 130
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=23.76 E-value=1.2e+02 Score=26.18 Aligned_cols=66 Identities=9% Similarity=0.132 Sum_probs=38.9
Q ss_pred CchhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEecCCccchHHHHHHHHHHhCCCC
Q 022546 41 EQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIANY-CPHALVNMISNPVNSTVPIAAEVFKKAGTYD 119 (295)
Q Consensus 41 ~d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~-~p~a~viv~tNP~d~~t~~~~~~~k~sg~~~ 119 (295)
.|+.++.+++|+||++.-.. ..+ ++.+.+..+ .|+..|+.+.|-.+..-.+ .+. +|
T Consensus 63 ~~~~~~~~~~DlVilavK~~----~~~------------~~l~~l~~~l~~~t~Iv~~~nGi~~~~~l----~~~---~~ 119 (320)
T 3i83_A 63 RSAAELETKPDCTLLCIKVV----EGA------------DRVGLLRDAVAPDTGIVLISNGIDIEPEV----AAA---FP 119 (320)
T ss_dssp SCGGGCSSCCSEEEECCCCC----TTC------------CHHHHHTTSCCTTCEEEEECSSSSCSHHH----HHH---ST
T ss_pred CCHHHcCCCCCEEEEecCCC----ChH------------HHHHHHHhhcCCCCEEEEeCCCCChHHHH----HHH---CC
Confidence 34445445999999975322 111 122334433 4678899999998765433 233 66
Q ss_pred CCCeeec-chh
Q 022546 120 EKKLFGV-TTL 129 (295)
Q Consensus 120 ~~kviG~-t~l 129 (295)
..+|++- +..
T Consensus 120 ~~~vl~g~~~~ 130 (320)
T 3i83_A 120 DNEVISGLAFI 130 (320)
T ss_dssp TSCEEEEEEEE
T ss_pred CCcEEEEEEEe
Confidence 6778764 544
No 131
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=23.60 E-value=1.9e+02 Score=25.16 Aligned_cols=56 Identities=18% Similarity=-0.059 Sum_probs=40.3
Q ss_pred hhhhcCCCcEEEEcCCCCCCC---CCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEecC
Q 022546 43 LGKALEGSDVVIIPAGVPRKP---GMTRDDLFNINAGIVKSLCTAIANYCPHALVNMISN 99 (295)
Q Consensus 43 ~~~al~daDiVvi~~g~~~~~---g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~viv~tN 99 (295)
+.++++++|+||-+++..... .....+.+..|+.-...+++.+.+.+.. .+|.+|.
T Consensus 87 ~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~-~~V~~SS 145 (379)
T 2c5a_A 87 CLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIK-RFFYASS 145 (379)
T ss_dssp HHHHHTTCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCS-EEEEEEE
T ss_pred HHHHhCCCCEEEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCC-EEEEEee
Confidence 456788999999988754321 2346677788999999999999876543 4555554
No 132
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=23.53 E-value=81 Score=25.38 Aligned_cols=56 Identities=16% Similarity=0.173 Sum_probs=38.2
Q ss_pred chhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEecC
Q 022546 42 QLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIANYCPHALVNMISN 99 (295)
Q Consensus 42 d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~viv~tN 99 (295)
++.++++++|+||.++|.... +....+.+..|..-...+++.+.+.+. +.+|++|.
T Consensus 77 ~~~~~~~~~d~vi~~ag~~~~-~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~iv~~SS 132 (242)
T 2bka_A 77 DYASAFQGHDVGFCCLGTTRG-KAGAEGFVRVDRDYVLKSAELAKAGGC-KHFNLLSS 132 (242)
T ss_dssp GGGGGGSSCSEEEECCCCCHH-HHHHHHHHHHHTHHHHHHHHHHHHTTC-CEEEEECC
T ss_pred HHHHHhcCCCEEEECCCcccc-cCCcccceeeeHHHHHHHHHHHHHCCC-CEEEEEcc
Confidence 456778899999999885421 112345667788888888888877653 45666655
No 133
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=22.63 E-value=1.4e+02 Score=23.35 Aligned_cols=47 Identities=11% Similarity=0.176 Sum_probs=33.1
Q ss_pred hhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEecC
Q 022546 45 KALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIANYCPHALVNMISN 99 (295)
Q Consensus 45 ~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~viv~tN 99 (295)
+++.++|+||.+++.+... ...|....+.+++.+++.+ ...++++|.
T Consensus 57 ~~~~~~d~vi~~ag~~~~~-------~~~~~~~~~~l~~a~~~~~-~~~~v~~SS 103 (221)
T 3ew7_A 57 SDLSDQNVVVDAYGISPDE-------AEKHVTSLDHLISVLNGTV-SPRLLVVGG 103 (221)
T ss_dssp HHHTTCSEEEECCCSSTTT-------TTSHHHHHHHHHHHHCSCC-SSEEEEECC
T ss_pred hhhcCCCEEEECCcCCccc-------cchHHHHHHHHHHHHHhcC-CceEEEEec
Confidence 6899999999999875321 2337777888888887764 345666654
No 134
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=22.53 E-value=2.2e+02 Score=23.27 Aligned_cols=55 Identities=13% Similarity=0.110 Sum_probs=40.6
Q ss_pred chhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEecC
Q 022546 42 QLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIANYCPHALVNMISN 99 (295)
Q Consensus 42 d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~viv~tN 99 (295)
+..+++++.|+||-.+|.. ....-...+..|+.-...+.+.+.+.+. +.||++|.
T Consensus 57 ~~~~~~~~~D~vi~~Ag~~--~~~~~~~~~~~N~~g~~~l~~a~~~~~~-~~iv~~SS 111 (267)
T 3rft_A 57 AVNAMVAGCDGIVHLGGIS--VEKPFEQILQGNIIGLYNLYEAARAHGQ-PRIVFASS 111 (267)
T ss_dssp HHHHHHTTCSEEEECCSCC--SCCCHHHHHHHHTHHHHHHHHHHHHTTC-CEEEEEEE
T ss_pred HHHHHHcCCCEEEECCCCc--CcCCHHHHHHHHHHHHHHHHHHHHHcCC-CEEEEEcc
Confidence 3456788999999998874 2234566788899999999999988764 45666653
No 135
>3r7w_B Gtpase2, GTP-binding protein GTR2; RAG gtpases, GTR1P, GTR2P, MTOR, protein transport; HET: GNP; 2.77A {Saccharomyces cerevisiae} PDB: 4arz_B*
Probab=22.36 E-value=1.5e+02 Score=26.18 Aligned_cols=52 Identities=4% Similarity=0.043 Sum_probs=37.0
Q ss_pred hcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCccchH
Q 022546 46 ALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIANYCPHALVNMISNPVNSTV 105 (295)
Q Consensus 46 al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t 105 (295)
-+++|+.+|++-....+ +......++++.+.+.+++|+..+++++|=+|+..
T Consensus 69 yyr~a~~~IlV~Ditd~--------~~~~~~~l~~~l~~~~~~~~~ipillvgNK~DL~~ 120 (331)
T 3r7w_B 69 LFKSVGALVYVIDSQDE--------YINAITNLAMIIEYAYKVNPSINIEVLIHKVDGLS 120 (331)
T ss_dssp HHTTCSEEEEECCCSSC--------TTHHHHHHHHHHHHHHHHCTTCEEEEECCCCCSSC
T ss_pred hccCCCEEEEEEECCch--------HHHHHHHHHHHHHHHhhcCCCCcEEEEEECcccCc
Confidence 36899999887654421 22334555566677777889999999999999864
No 136
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=22.21 E-value=66 Score=27.53 Aligned_cols=57 Identities=19% Similarity=0.124 Sum_probs=41.3
Q ss_pred hhhhcCC--CcEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEecC
Q 022546 43 LGKALEG--SDVVIIPAGVPRKP--GMTRDDLFNINAGIVKSLCTAIANYCPHALVNMISN 99 (295)
Q Consensus 43 ~~~al~d--aDiVvi~~g~~~~~--g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~viv~tN 99 (295)
+.+++++ +|+||-+++..... ..+....+..|+.-...+++.+.+...++.+|.+|.
T Consensus 65 ~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS 125 (347)
T 1orr_A 65 VTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSST 125 (347)
T ss_dssp HHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred HHHHHhccCCCEEEECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecc
Confidence 4456777 99999998854210 113456778899999999999998876667777765
No 137
>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}
Probab=22.07 E-value=1.2e+02 Score=25.37 Aligned_cols=57 Identities=12% Similarity=0.000 Sum_probs=36.3
Q ss_pred chhhhcCCCcEEEEcCCCCCCCCC-C-HHHHHHHHHHHHHHHHHHHHhhCCCeEEEEecC
Q 022546 42 QLGKALEGSDVVIIPAGVPRKPGM-T-RDDLFNINAGIVKSLCTAIANYCPHALVNMISN 99 (295)
Q Consensus 42 d~~~al~daDiVvi~~g~~~~~g~-~-r~~~~~~n~~i~~~i~~~i~~~~p~a~viv~tN 99 (295)
++.++++++|+||-+++.. .... + ..+.+..|+.-...+++.+.+...-..+|++|-
T Consensus 67 ~~~~~~~~~d~vih~A~~~-~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS 125 (322)
T 2p4h_X 67 SFAAAIEGCVGIFHTASPI-DFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSS 125 (322)
T ss_dssp GGHHHHTTCSEEEECCCCC---------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEE
T ss_pred HHHHHHcCCCEEEEcCCcc-cCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecc
Confidence 4567889999999988532 1111 1 223678899999999998887621235666553
No 138
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=21.65 E-value=2.3e+02 Score=20.38 Aligned_cols=79 Identities=11% Similarity=0.037 Sum_probs=42.3
Q ss_pred CeEEEEeCCC--chhHHHhhhCCCCCCeEEEeeCCCchhhhc-----CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHH
Q 022546 8 SSLSLYDIAN--TPGVAADVSHINSPAQVEGYAGEEQLGKAL-----EGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKS 80 (295)
Q Consensus 8 ~ei~L~D~~~--~~~~~~Dl~~~~~~~~v~~~~~t~d~~~al-----~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~ 80 (295)
-.|.++|-+. ......-|........+.... +..+++ ...|+||+-...+ +++..+
T Consensus 21 ~~iLivdd~~~~~~~l~~~L~~~~~~~~v~~~~---~~~~al~~l~~~~~dlii~D~~l~---~~~g~~----------- 83 (150)
T 4e7p_A 21 MKVLVAEDQSMLRDAMCQLLTLQPDVESVLQAK---NGQEAIQLLEKESVDIAILDVEMP---VKTGLE----------- 83 (150)
T ss_dssp EEEEEECSCHHHHHHHHHHHHTSTTEEEEEEES---SHHHHHHHHTTSCCSEEEECSSCS---SSCHHH-----------
T ss_pred cEEEEEcCCHHHHHHHHHHHHhCCCcEEEEEEC---CHHHHHHHhhccCCCEEEEeCCCC---CCcHHH-----------
Confidence 3688899776 333333344332112333332 223433 3578888854433 455443
Q ss_pred HHHHHHhhCCCeEEEEecCCccc
Q 022546 81 LCTAIANYCPHALVNMISNPVNS 103 (295)
Q Consensus 81 i~~~i~~~~p~a~viv~tNP~d~ 103 (295)
+++.+++..|+..+|++|...+.
T Consensus 84 ~~~~l~~~~~~~~ii~ls~~~~~ 106 (150)
T 4e7p_A 84 VLEWIRSEKLETKVVVVTTFKRA 106 (150)
T ss_dssp HHHHHHHTTCSCEEEEEESCCCH
T ss_pred HHHHHHHhCCCCeEEEEeCCCCH
Confidence 33445556788888888877663
No 139
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=21.64 E-value=93 Score=24.35 Aligned_cols=49 Identities=8% Similarity=0.043 Sum_probs=35.4
Q ss_pred CcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEecC
Q 022546 50 SDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIANYCPHALVNMISN 99 (295)
Q Consensus 50 aDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~viv~tN 99 (295)
+|+||.+++.......+..+....|......+++.+.+.+.. .++.+|.
T Consensus 66 ~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~Ss 114 (215)
T 2a35_A 66 IDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGAR-HYLVVSA 114 (215)
T ss_dssp CSEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTTCC-EEEEECC
T ss_pred hcEEEECeeeccccCCCHHHHHHhhHHHHHHHHHHHHHcCCC-EEEEECC
Confidence 899999988643222456677788999999999998886543 4666654
No 140
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=21.50 E-value=75 Score=29.34 Aligned_cols=44 Identities=11% Similarity=0.083 Sum_probs=29.6
Q ss_pred chhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCcc
Q 022546 42 QLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIANYCPHALVNMISNPVN 102 (295)
Q Consensus 42 d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~viv~tNP~d 102 (295)
++.+++++||+|+.+.+...--+.+ .+....|++++++++++..
T Consensus 259 sL~eal~~ADVVilt~gt~~iI~~e-----------------~l~~MK~gAIVINvgRg~v 302 (436)
T 3h9u_A 259 LVEDVVEEAHIFVTTTGNDDIITSE-----------------HFPRMRDDAIVCNIGHFDT 302 (436)
T ss_dssp CHHHHTTTCSEEEECSSCSCSBCTT-----------------TGGGCCTTEEEEECSSSGG
T ss_pred CHHHHHhhCCEEEECCCCcCccCHH-----------------HHhhcCCCcEEEEeCCCCC
Confidence 4678999999999865533211111 2344568999999998753
No 141
>1bb1_A Designed, thermostable heterotrimeric coiled coil; de novo protein design; 1.80A {Synthetic construct} SCOP: k.7.1.1 PDB: 1bb1_C 1u0i_B
Probab=21.47 E-value=1.2e+02 Score=16.83 Aligned_cols=25 Identities=16% Similarity=0.325 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhh
Q 022546 268 DYEKQGLESLKPELKASIEKGIQFA 292 (295)
Q Consensus 268 ~~E~~~l~~s~~~l~~~~~~~~~~~ 292 (295)
++|+..+++-...+++.+...-+++
T Consensus 8 eyeqaaikeeiaaikdkiaaikeyi 32 (36)
T 1bb1_A 8 EYEQAAIKEEIAAIKDKIAAIKEYI 32 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5788888888888887777665554
No 142
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=21.38 E-value=1e+02 Score=26.65 Aligned_cols=44 Identities=16% Similarity=0.200 Sum_probs=25.2
Q ss_pred eEEEEeCCC-chhHHHhh-hCCCCCCeEEEeeCCCchhhhcCCCcEEEEcC
Q 022546 9 SLSLYDIAN-TPGVAADV-SHINSPAQVEGYAGEEQLGKALEGSDVVIIPA 57 (295)
Q Consensus 9 ei~L~D~~~-~~~~~~Dl-~~~~~~~~v~~~~~t~d~~~al~daDiVvi~~ 57 (295)
+++++|+++ ....+.+. .+... ..++.. +|+. ++++||+||.+.
T Consensus 36 ~V~v~d~~~~~~~~~~~~l~~~~~-~~i~~~---~~~~-~~~~aDlVieav 81 (293)
T 1zej_A 36 EVVLQDVSEKALEAAREQIPEELL-SKIEFT---TTLE-KVKDCDIVMEAV 81 (293)
T ss_dssp EEEEECSCHHHHHHHHHHSCGGGG-GGEEEE---SSCT-TGGGCSEEEECC
T ss_pred EEEEEECCHHHHHHHHHHHHHHHh-CCeEEe---CCHH-HHcCCCEEEEcC
Confidence 799999976 22222222 11111 134432 3554 589999999975
No 143
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=21.06 E-value=2.1e+02 Score=20.63 Aligned_cols=76 Identities=16% Similarity=0.211 Sum_probs=42.9
Q ss_pred CeEEEEeCCC--chhHHHhhhCCCCCCeEEEeeCCCchhhhc-----CC-CcEEEEcCCCCCCCCCCHHHHHHHHHHHHH
Q 022546 8 SSLSLYDIAN--TPGVAADVSHINSPAQVEGYAGEEQLGKAL-----EG-SDVVIIPAGVPRKPGMTRDDLFNINAGIVK 79 (295)
Q Consensus 8 ~ei~L~D~~~--~~~~~~Dl~~~~~~~~v~~~~~t~d~~~al-----~d-aDiVvi~~g~~~~~g~~r~~~~~~n~~i~~ 79 (295)
..|.++|-++ ......-|.. ...+.... +..+++ .. .|+||+-...+ +++..++
T Consensus 5 ~~ILivdd~~~~~~~l~~~L~~---~~~v~~~~---~~~~a~~~l~~~~~~dlvi~D~~l~---~~~g~~~--------- 66 (151)
T 3kcn_A 5 ERILLVDDDYSLLNTLKRNLSF---DFEVTTCE---SGPEALACIKKSDPFSVIMVDMRMP---GMEGTEV--------- 66 (151)
T ss_dssp CEEEEECSCHHHHHHHHHHHTT---TSEEEEES---SHHHHHHHHHHSCCCSEEEEESCCS---SSCHHHH---------
T ss_pred CeEEEEeCCHHHHHHHHHHhcc---CceEEEeC---CHHHHHHHHHcCCCCCEEEEeCCCC---CCcHHHH---------
Confidence 4688999876 3333333433 23555432 223433 23 49988865443 4555433
Q ss_pred HHHHHHHhhCCCeEEEEecCCccc
Q 022546 80 SLCTAIANYCPHALVNMISNPVNS 103 (295)
Q Consensus 80 ~i~~~i~~~~p~a~viv~tNP~d~ 103 (295)
++.+++..|+..+|++|...+.
T Consensus 67 --~~~l~~~~~~~~ii~~s~~~~~ 88 (151)
T 3kcn_A 67 --IQKARLISPNSVYLMLTGNQDL 88 (151)
T ss_dssp --HHHHHHHCSSCEEEEEECGGGH
T ss_pred --HHHHHhcCCCcEEEEEECCCCH
Confidence 3445566788888888877664
No 144
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=21.03 E-value=2.4e+02 Score=21.55 Aligned_cols=52 Identities=17% Similarity=0.222 Sum_probs=34.2
Q ss_pred chhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEecC
Q 022546 42 QLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIANYCPHALVNMISN 99 (295)
Q Consensus 42 d~~~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~viv~tN 99 (295)
++.++++++|+||.+++........ ..|......+++.+.+.+.. .++.+|.
T Consensus 60 ~~~~~~~~~d~vi~~a~~~~~~~~~-----~~n~~~~~~~~~~~~~~~~~-~~v~~Ss 111 (206)
T 1hdo_A 60 DVDKTVAGQDAVIVLLGTRNDLSPT-----TVMSEGARNIVAAMKAHGVD-KVVACTS 111 (206)
T ss_dssp HHHHHHTTCSEEEECCCCTTCCSCC-----CHHHHHHHHHHHHHHHHTCC-EEEEECC
T ss_pred HHHHHHcCCCEEEECccCCCCCCcc-----chHHHHHHHHHHHHHHhCCC-eEEEEee
Confidence 4557789999999988754321111 25667777888888776543 5666654
No 145
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A*
Probab=21.02 E-value=27 Score=34.45 Aligned_cols=59 Identities=20% Similarity=0.200 Sum_probs=34.1
Q ss_pred hhcCCCcEEEEcCCCCCCCCC--------CHHHHHHHHHHHHHHHHHHHHhhCCCeEEEE-ecCCccchH
Q 022546 45 KALEGSDVVIIPAGVPRKPGM--------TRDDLFNINAGIVKSLCTAIANYCPHALVNM-ISNPVNSTV 105 (295)
Q Consensus 45 ~al~daDiVvi~~g~~~~~g~--------~r~~~~~~n~~i~~~i~~~i~~~~p~a~viv-~tNP~d~~t 105 (295)
++.++||++|++.|....+|. +|.++-.-. -=.++++.+.+.+++-++++ -++|+++..
T Consensus 423 ~~A~~aDv~Iv~vg~~~gEg~~~~~g~~gDR~~l~Lp~--~Q~~Li~~v~~~~~~~VVVl~sG~p~~~~~ 490 (713)
T 3zyz_A 423 SAARGKDVAIVFITADSGEGYITVEGNAGDRNNLDPWH--NGNALVQAVAGANSNVIVVVHSVGAIILEQ 490 (713)
T ss_dssp HHHTTCSEEEEEEEECCBCTTCCBTTBCSSCSCSSCST--THHHHHHHHHHHCSCEEEEEEESSCCCCHH
T ss_pred HHhhcCCEEEEEecccCCCCccccccCCCCcccccCCh--hHHHHHHHHHHhCCCeEEEEecCCcccchh
Confidence 346899999987654332332 443221100 01356677777888765554 489997654
No 146
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=21.01 E-value=1.6e+02 Score=27.23 Aligned_cols=56 Identities=20% Similarity=0.182 Sum_probs=37.2
Q ss_pred hhhcCCCcEEEEcCCCCCC---CCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEecC
Q 022546 44 GKALEGSDVVIIPAGVPRK---PGMTRDDLFNINAGIVKSLCTAIANYCPHALVNMISN 99 (295)
Q Consensus 44 ~~al~daDiVvi~~g~~~~---~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~viv~tN 99 (295)
.+++.++|+||-+++.... ...........|+.-...+++.+.+.+.-..+|.+|.
T Consensus 196 ~~~l~~~D~Vih~A~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS 254 (516)
T 3oh8_A 196 SDLLDGADVLVHLAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASA 254 (516)
T ss_dssp TTTTTTCSEEEECCCC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEE
T ss_pred HHhcCCCCEEEECCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCc
Confidence 5778999999998886422 1223566778899999999998544433335665553
No 147
>2w3g_A DOSS, two component sensor histidine kinase DEVS (GAF family protein); redox sensor, heme, hypoxia, GAF domain, transferase; HET: HEM; 1.40A {Mycobacterium tuberculosis} PDB: 2w3d_A* 2w3f_A* 2w3e_A* 2w3h_A* 2y79_A* 2y8h_A* 2vzw_A*
Probab=20.97 E-value=2.3e+02 Score=20.02 Aligned_cols=47 Identities=17% Similarity=0.239 Sum_probs=33.6
Q ss_pred ccEEEEeEEEcCC--ceEEEcc--C-CCCCHHHHHHHHHHHHHHHHHHHHHh
Q 022546 243 LPFFASKVRLGKN--GADEVLG--L-GPLSDYEKQGLESLKPELKASIEKGI 289 (295)
Q Consensus 243 ~~~~s~Pv~ig~~--Gv~~v~~--~-~~L~~~E~~~l~~s~~~l~~~~~~~~ 289 (295)
..++++|.+.+.+ |+..+.. . ..+++++...|+..+..+-..++.+.
T Consensus 96 ~s~l~vPl~~~~~~~Gvl~l~~~~~~~~f~~~~~~~l~~la~~~a~ai~~a~ 147 (153)
T 2w3g_A 96 RTFLGVPVRVRDESFGTLYLTDKTNGQPFSDDDEVLVQALAAAAGIAVANAR 147 (153)
T ss_dssp CCEEEEEEEETTEEEEEEEEEEETTSCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEeeEEECCEEEEEEEEeeCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5688999997433 4433322 1 26999999999999998887777654
No 148
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=20.44 E-value=1.1e+02 Score=26.31 Aligned_cols=59 Identities=8% Similarity=0.106 Sum_probs=37.8
Q ss_pred hhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEecCCccchHHHHHHHHHHhCCCCCCCe
Q 022546 45 KALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIANY-CPHALVNMISNPVNSTVPIAAEVFKKAGTYDEKKL 123 (295)
Q Consensus 45 ~al~daDiVvi~~g~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~-~p~a~viv~tNP~d~~t~~~~~~~k~sg~~~~~kv 123 (295)
+++.++|+||++.-.. . ++++++.++.+ .|+..|+.+.|-.+....+ .+. +|..+|
T Consensus 65 ~~~~~~D~vilavk~~----~------------~~~~l~~l~~~l~~~~~iv~l~nGi~~~~~l----~~~---~~~~~v 121 (312)
T 3hn2_A 65 EEIGPMDLVLVGLKTF----A------------NSRYEELIRPLVEEGTQILTLQNGLGNEEAL----ATL---FGAERI 121 (312)
T ss_dssp HHHCCCSEEEECCCGG----G------------GGGHHHHHGGGCCTTCEEEECCSSSSHHHHH----HHH---TCGGGE
T ss_pred HHcCCCCEEEEecCCC----C------------cHHHHHHHHhhcCCCCEEEEecCCCCcHHHH----HHH---CCCCcE
Confidence 5578999999975321 1 12334445544 4788899999998765443 232 666787
Q ss_pred eec
Q 022546 124 FGV 126 (295)
Q Consensus 124 iG~ 126 (295)
++-
T Consensus 122 ~~~ 124 (312)
T 3hn2_A 122 IGG 124 (312)
T ss_dssp EEE
T ss_pred EEE
Confidence 765
No 149
>3uhf_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich fold, isomerase; HET: DGL; 1.83A {Campylobacter jejuni} PDB: 3uho_A* 3uhp_A
Probab=20.37 E-value=4e+02 Score=22.60 Aligned_cols=53 Identities=9% Similarity=0.061 Sum_probs=32.4
Q ss_pred hhhcCCCcEEEEcCCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCc
Q 022546 44 GKALEGSDVVIIPAGVPRKPGM-TRDDLFNINAGIVKSLCTAIANYCPHALVNMISNPV 101 (295)
Q Consensus 44 ~~al~daDiVvi~~g~~~~~g~-~r~~~~~~n~~i~~~i~~~i~~~~p~a~viv~tNP~ 101 (295)
.+.+-+.|++-+.+.....+|. +..+.. +.+.++++.+.+.+.++++| .+|-.
T Consensus 44 ~~~lP~e~~iy~~D~a~~PYG~ks~e~i~----~~~~~~~~~L~~~g~d~IVI-ACNTa 97 (274)
T 3uhf_A 44 YEARLFDEIIYYGDTARVPYGVKDKDTII----KFCLEALDFFEQFQIDMLII-ACNTA 97 (274)
T ss_dssp HHTTCCSEEEEEECTTTCCCTTSCHHHHH----HHHHHHHHHHTTSCCSEEEE-CCHHH
T ss_pred HHHCCCCCEEEEecCCCCCCCCCCHHHHH----HHHHHHHHHHHHCCCCEEEE-eCCCh
Confidence 3456778888886554445665 444443 44555667778888887555 45543
No 150
>3mmh_A FRMSR, methionine-R-sulfoxide reductase; oxidoreductase; HET: SME MRD; 1.25A {Neisseria meningitidis} SCOP: d.110.2.0
Probab=20.26 E-value=2.3e+02 Score=21.89 Aligned_cols=44 Identities=14% Similarity=0.068 Sum_probs=31.8
Q ss_pred ccEEEEeEEEcCC--ceEEEcc--CCCCCHHHHHHHHHHHHHHHHHHH
Q 022546 243 LPFFASKVRLGKN--GADEVLG--LGPLSDYEKQGLESLKPELKASIE 286 (295)
Q Consensus 243 ~~~~s~Pv~ig~~--Gv~~v~~--~~~L~~~E~~~l~~s~~~l~~~~~ 286 (295)
.-.+++|.+.+.+ ||..+.. ...+++++.+.|+..+..|-..+.
T Consensus 114 ~S~i~vPi~~~g~viGVL~i~s~~~~~F~~~d~~~L~~lA~~la~~i~ 161 (167)
T 3mmh_A 114 RSEIVVPLFSDGRCIGVLDADSEHLAQFDETDALYLGELAKILEKRFE 161 (167)
T ss_dssp CEEEEEEEEETTEEEEEEEEEESSTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeccCCEEEEEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 4678899988544 5554433 236899999999999988876554
No 151
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=20.07 E-value=1.5e+02 Score=24.96 Aligned_cols=40 Identities=5% Similarity=0.056 Sum_probs=24.2
Q ss_pred CeEEEEeCCC-chhHHHhhhCCCCCCeEEEeeCCCchhhhcCCCcEEEEcC
Q 022546 8 SSLSLYDIAN-TPGVAADVSHINSPAQVEGYAGEEQLGKALEGSDVVIIPA 57 (295)
Q Consensus 8 ~ei~L~D~~~-~~~~~~Dl~~~~~~~~v~~~~~t~d~~~al~daDiVvi~~ 57 (295)
-+++++|+++ ......+. .+.. ++++.+++++||+||++.
T Consensus 25 ~~V~~~dr~~~~~~~~~~~-------g~~~---~~~~~~~~~~advvi~~v 65 (287)
T 3pdu_A 25 FDVTVWNRNPAKCAPLVAL-------GARQ---ASSPAEVCAACDITIAML 65 (287)
T ss_dssp CCEEEECSSGGGGHHHHHH-------TCEE---CSCHHHHHHHCSEEEECC
T ss_pred CeEEEEcCCHHHHHHHHHC-------CCee---cCCHHHHHHcCCEEEEEc
Confidence 3688999876 22222221 1122 235678889999999975
Done!