RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= 022546
(295 letters)
>d2cmda2 d.162.1.1 (A:146-312) Malate dehydrogenase {Escherichia
coli [TaxId: 562]}
Length = 167
Score = 155 bits (393), Expect = 6e-48
Identities = 79/169 (46%), Positives = 103/169 (60%), Gaps = 2/169 (1%)
Query: 126 VTTLDVVRAKTFYAGKVNVPVAEVNVPVIGGHAGVTILPLFSQATPKSNNLSDEEIKALT 185
VTTLD++R+ TF A EV VPVIGGH+GVTILPL SQ + +++E+ LT
Sbjct: 1 VTTLDIIRSNTFVAELKGKQPGEVEVPVIGGHSGVTILPLLSQVPGV--SFTEQEVADLT 58
Query: 186 KRTQDGGTEVVEAKAGKGSATLSMAYAGAVFADACLMGLNGVPDIVECTFVQSSVTELPF 245
KR Q+ GTEVVEAKAG GSATLSM A A F + + L G +VEC +V+ F
Sbjct: 59 KRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGEQGVVECAYVEGDGQYARF 118
Query: 246 FASKVRLGKNGADEVLGLGPLSDYEKQGLESLKPELKASIEKGIQFANR 294
F+ + LGKNG +E +G LS +E+ LE + LK I G +F N+
Sbjct: 119 FSQPLLLGKNGVEERKSIGTLSAFEQNALEGMLDTLKKDIALGQEFVNK 167
>d1mlda2 d.162.1.1 (A:145-313) Malate dehydrogenase {Pig (Sus
scrofa) [TaxId: 9823]}
Length = 169
Score = 152 bits (385), Expect = 1e-46
Identities = 86/168 (51%), Positives = 117/168 (69%), Gaps = 1/168 (0%)
Query: 126 VTTLDVVRAKTFYAGKVNVPVAEVNVPVIGGHAGVTILPLFSQATPKSNNLSDEEIKALT 185
VTTLD+VRA F A + A V+VPVIGGHAG TI+PL SQ TPK + +++ LT
Sbjct: 1 VTTLDIVRANAFVAELKGLDPARVSVPVIGGHAGKTIIPLISQCTPK-VDFPQDQLSTLT 59
Query: 186 KRTQDGGTEVVEAKAGKGSATLSMAYAGAVFADACLMGLNGVPDIVECTFVQSSVTELPF 245
R Q+ GTEVV+AKAG GSATLSMAYAGA F + + +NG +VEC+FV+S T+ P+
Sbjct: 60 GRIQEAGTEVVKAKAGAGSATLSMAYAGARFVFSLVDAMNGKEGVVECSFVKSQETDCPY 119
Query: 246 FASKVRLGKNGADEVLGLGPLSDYEKQGLESLKPELKASIEKGIQFAN 293
F++ + LGK G ++ LG+G +S +E++ + PELKASI+KG +F
Sbjct: 120 FSTPLLLGKKGIEKNLGIGKISPFEEKMIAEAIPELKASIKKGEEFVK 167
>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa)
[TaxId: 9823]}
Length = 144
Score = 119 bits (300), Expect = 3e-34
Identities = 83/125 (66%), Positives = 99/125 (79%)
Query: 1 MKLDPLVSSLSLYDIANTPGVAADVSHINSPAQVEGYAGEEQLGKALEGSDVVIIPAGVP 60
+K PLVS L+LYDIA+TPGVAAD+SHI + A V+GY G EQL L+G DVV+IPAGVP
Sbjct: 20 LKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGVP 79
Query: 61 RKPGMTRDDLFNINAGIVKSLCTAIANYCPHALVNMISNPVNSTVPIAAEVFKKAGTYDE 120
RKPGMTRDDLFN NA IV +L A A +CP A++ +ISNPVNST+PI AEVFKK G Y+
Sbjct: 80 RKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISNPVNSTIPITAEVFKKHGVYNP 139
Query: 121 KKLFG 125
K+FG
Sbjct: 140 NKIFG 144
>d1guza2 d.162.1.1 (A:143-305) Malate dehydrogenase {Chlorobium
vibrioforme [TaxId: 1098]}
Length = 163
Score = 111 bits (278), Expect = 8e-31
Identities = 37/162 (22%), Positives = 72/162 (44%), Gaps = 6/162 (3%)
Query: 129 LDVVRAKTFYAGKVNVPVAEVNVPVIGGHAGVTILPLFSQATPK---SNNLSDEEIKALT 185
LD R ++F A ++ V + ++N V+GGH + + S+ L E I L
Sbjct: 4 LDAARFRSFIAMELGVSMQDINACVLGGHGDAMVPVVKYTTVAGIPISDLLPAETIDKLV 63
Query: 186 KRTQDGGTEVVEAKAGKGSATLSMAYAGAVFADACLMGLNGVPDIVECTFVQSSVTELPF 245
+RT++GG E+VE +GSA + A + ++ ++ V Q + + F
Sbjct: 64 ERTRNGGAEIVEH-LKQGSAFYAPASSVVEMVESIVLDRKRVLPCAVGLEGQYGI-DKTF 121
Query: 246 FASKVRLGKNGADEVLGLGPLSDYEKQGLESLKPELKASIEK 287
V+LG+NG +++ + L + L+ + + +
Sbjct: 122 VGVPVKLGRNGVEQIYEI-NLDQADLDLLQKSAKIVDENCKM 162
>d1uxja2 d.162.1.1 (A:144-307) Malate dehydrogenase {Chloroflexus
aurantiacus [TaxId: 1108]}
Length = 164
Score = 109 bits (274), Expect = 3e-30
Identities = 42/162 (25%), Positives = 73/162 (45%), Gaps = 6/162 (3%)
Query: 129 LDVVRAKTFYAGKVNVPVAEVNVPVIGGHAGVTILPLFSQAT---PKSNNLSDEEIKALT 185
LD R +TF A + V V +V ++GGH + P S ++ + + +
Sbjct: 4 LDAARYRTFIAMEAGVSVKDVQAMLMGGHGDEMVPLPRFSTISGIPVSEFIAPDRLAQIV 63
Query: 186 KRTQDGGTEVVEAKAGKGSATLSMAYAGAVFADACLMGLNGVPDIVECTFVQSSVTELPF 245
+RT+ GG E+V GSA + A A A +A L V + Q + ++ F
Sbjct: 64 ERTRKGGGEIVNLL-KTGSAYYAPAAATAQMVEAVLKDKKRVMPVAAYLTGQYGLNDIYF 122
Query: 246 FASKVRLGKNGADEVLGLGPLSDYEKQGLESLKPELKASIEK 287
V LG G +++L L PL++ E L + ++A+++
Sbjct: 123 G-VPVILGAGGVEKILEL-PLNEEEMALLNASAKAVRATLDT 162
>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli
[TaxId: 562]}
Length = 145
Score = 105 bits (264), Expect = 6e-29
Identities = 75/122 (61%), Positives = 93/122 (76%), Gaps = 2/122 (1%)
Query: 5 PLVSSLSLYDIAN-TPGVAADVSHINSPAQVEGYAGEEQLGKALEGSDVVIIPAGVPRKP 63
P S LSLYDIA TPGVA D+SHI + +++G++GE+ ALEG+DVV+I AGV RKP
Sbjct: 25 PSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDAT-PALEGADVVLISAGVRRKP 83
Query: 64 GMTRDDLFNINAGIVKSLCTAIANYCPHALVNMISNPVNSTVPIAAEVFKKAGTYDEKKL 123
GM R DLFN+NAGIVK+L +A CP A + +I+NPVN+TV IAAEV KKAG YD+ KL
Sbjct: 84 GMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITNPVNTTVAIAAEVLKKAGVYDKNKL 143
Query: 124 FG 125
FG
Sbjct: 144 FG 145
>d5mdha2 d.162.1.1 (A:155-333) Malate dehydrogenase {Pig (Sus
scrofa) [TaxId: 9823]}
Length = 179
Score = 106 bits (265), Expect = 1e-28
Identities = 37/182 (20%), Positives = 63/182 (34%), Gaps = 16/182 (8%)
Query: 127 TTLDVVRAKTFYAGKVNVPVAEVNVPVIGGHAGVTILPLFSQATPKSNNLSD-------- 178
T LD RAK A K+ V +V +I G+ T P + A K
Sbjct: 1 TRLDHNRAKAQIALKLGVTSDDVKNVIIWGNHSSTQYPDVNHAKVKLQAKEVGVYEAVKD 60
Query: 179 --EEIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAVFADACLMGLNGVPDIVECTFV 236
Q G V++A+ K S+ +S A A G +
Sbjct: 61 DSWLKGEFITTVQQRGAAVIKAR--KLSSAMSAAKAICDHVRDIWFGTPEGEFVSMGIIS 118
Query: 237 QSS---VTELPFFASKVRLGKNGADEVLGLGPLSDYEKQGLESLKPELKASIEKGIQFAN 293
+ V + ++ V + V GL P++D+ ++ ++ EL E +F +
Sbjct: 119 DGNSYGVPDDLLYSFPVTIKDKTWKIVEGL-PINDFSREKMDLTAKELAEEKETAFEFLS 177
Query: 294 RS 295
+
Sbjct: 178 SA 179
>d1ldma2 d.162.1.1 (A:161-329) Lactate dehydrogenase {Dogfish
(Squalus acanthias) [TaxId: 7797]}
Length = 169
Score = 94.9 bits (235), Expect = 2e-24
Identities = 32/170 (18%), Positives = 63/170 (37%), Gaps = 8/170 (4%)
Query: 127 TTLDVVRAKTFYAGKVNVPVAEVNVPVIGGHAGVTILPLFSQATPKSNNLSD-----EEI 181
LD R + ++ V + VIG H G ++ ++S S L ++
Sbjct: 3 CNLDSARFRYLMGERLGVHSCSCHGWVIGEH-GDSVPSVWSGMNVASIKLHPLDGTNKDK 61
Query: 182 KALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAVFADACLMGLNGVPDIVECTFVQSSVT 241
+ K +D E KG + ++ + A A+ + L V + +
Sbjct: 62 QDWKKLHKDVVDSAYEVIKLKGYTSWAIGLSVADLAETIMKNLCRVHPVSTMVKDFYGIK 121
Query: 242 ELPFFASKVRLGKNGADEVLGLGPLSDYEKQGLESLKPELKASIEKGIQF 291
+ F + L +G ++ + L E+Q L+ L I+K ++F
Sbjct: 122 DNVFLSLPCVLNDHGISNIVKM-KLKPNEEQQLQKSATTLW-DIQKDLKF 169
>d1llda2 d.162.1.1 (A:150-319) Lactate dehydrogenase
{Bifidobacterium longum, strain am101-2 [TaxId: 216816]}
Length = 170
Score = 92.6 bits (229), Expect = 1e-23
Identities = 33/173 (19%), Positives = 68/173 (39%), Gaps = 18/173 (10%)
Query: 127 TTLDVVRAKTFYAGKVNVPVAEVNVPVIGGHAGVTILPLFSQATPKSNNLSD-------- 178
T LD R + A + V V V+ + G H G + +PL+ AT +SD
Sbjct: 1 TNLDSARLRFLIAQQTGVNVKNVHAYIAGEH-GDSEVPLWESATIGGVPMSDWTPLPGHD 59
Query: 179 ----EEIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAVFADACLMGLNGVPDIVECT 234
++ + + + ++ ++ GKG+ ++ +G +A L N + +
Sbjct: 60 PLDADKREEIHQEVKNAAYKI---INGKGATNYAIGMSGVDIIEAVLHDTNRILPVSSML 116
Query: 235 FVQSSVTELPFFASKVRLGKNGADEVLGLGPLSDYEKQGLESLKPELKASIEK 287
++++ L + G + + P+SD E L+ LK + +
Sbjct: 117 KDFHGISDICMS-VPTLLNRQGVNNTINT-PVSDKELAALKRSAETLKETAAQ 167
>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon
Archaeoglobus fulgidus [TaxId: 2234]}
Length = 142
Score = 91.3 bits (226), Expect = 2e-23
Identities = 37/128 (28%), Positives = 63/128 (49%), Gaps = 6/128 (4%)
Query: 1 MKLDPLVSSLSLYDIANTP--GVAADVSHINSPAQVEGYAGEEQLGKALEGSDVVIIPAG 58
L+ V ++L DIA G A D++H + L+GS+++++ AG
Sbjct: 19 CLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSLLKGSEIIVVTAG 78
Query: 59 VPRKPGMTRDDLFNINAGIVKSLCTAIANYCPHALVNMISNPVNSTVPIAAEVFKKAGTY 118
+ RKPGMTR DL + NAGI+K + I P + + +++NP++ I K
Sbjct: 79 LARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNPMDVMTYIM----WKESGK 134
Query: 119 DEKKLFGV 126
++FG+
Sbjct: 135 PRNEVFGM 142
>d1a5za2 d.162.1.1 (A:164-333) Lactate dehydrogenase {Thermotoga
maritima [TaxId: 2336]}
Length = 172
Score = 92.2 bits (228), Expect = 2e-23
Identities = 31/176 (17%), Positives = 55/176 (31%), Gaps = 14/176 (7%)
Query: 127 TTLDVVRAKTFYAGKVNVPVAEVNVPVIGGHAGVTILPLFSQATPKSN---------NLS 177
T LD R +T A V+V VIG H +
Sbjct: 2 TVLDTARLRTLIAQHCGFSPRSVHVYVIGEHGDSEVPVWSGAMIGGIPLQNMCQVCQKCD 61
Query: 178 DEEIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAVFADACLMGLNGVPDIVECTFVQ 237
+ ++ ++T+ E++E K A + + +E
Sbjct: 62 SKILENFAEKTKRAAYEIIERKGATHYAIALAVADIVESIFFDEKRVLTLSVYLEDYLGV 121
Query: 238 SSVTELPFFASKVRLGKNGADEVLGLGPLSDYEKQGLESLKPELKASIEKGIQFAN 293
+ + V LGK+G + +L L L++ E + LK +I + N
Sbjct: 122 KDL----CISVPVTLGKHGVERILEL-NLNEEELEAFRKSASILKNAINEITAEEN 172
>d1llca2 d.162.1.1 (A:165-334) Lactate dehydrogenase {Lactobacillus
casei [TaxId: 1582]}
Length = 172
Score = 91.8 bits (227), Expect = 3e-23
Identities = 33/170 (19%), Positives = 68/170 (40%), Gaps = 10/170 (5%)
Query: 127 TTLDVVRAKTFYAGKVNVPVAEVNVPVIGGHAGVTILPLFSQATPKSNNLSDEEIKALTK 186
T+LD R + A VNV V+ ++G H G T P++S A + E +KA +
Sbjct: 1 TSLDTARFRQSIAEMVNVDARSVHAYIMGEH-GDTEFPVWSHANIGGVTI-AEWVKAHPE 58
Query: 187 RTQDGGTEVVE------AKAGKGSATLSMAYAGAVFADACLMGLNGVPDIVECTFVQSSV 240
+D ++ E + K A A+ + + + + ++
Sbjct: 59 IKEDKLVKMFEDVRDAAYEIIKLKGATFYGIATALARISKAILNDENAVLPLSVYMDGQY 118
Query: 241 TEL-PFFASKVRLGKNGADEVLGLGPLSDYEKQGLESLKPELKASIEKGI 289
+ + + +NG +L + PL+D+E++ ++ +LK +
Sbjct: 119 GINDLYIGTPAVINRNGIQNILEI-PLTDHEEESMQKSASQLKKVLTDAF 167
>d1o6za2 d.162.1.1 (A:163-330) Malate dehydrogenase {Archaeon
Haloarcula marismortui [TaxId: 2238]}
Length = 161
Score = 91.0 bits (225), Expect = 4e-23
Identities = 38/166 (22%), Positives = 65/166 (39%), Gaps = 9/166 (5%)
Query: 124 FGVTTLDVVRAKTFYAGKVNVPVAEVNVPVIGGHAGVTILPLFSQATPKSNN--LSDEEI 181
FG LD R + + + + PV V ++G H G +P+FS+ + + S +E
Sbjct: 1 FG-GRLDSARFRYVLSEEFDAPVQNVEGTILGEH-GDAQVPVFSKVSVDGTDPEFSGDEK 58
Query: 182 KALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAVFADACLMGLNGVPDIVECTFVQSSVT 241
+ L Q+ ++ KG+ A A +A L V +
Sbjct: 59 EQLLGDLQESA---MDVIERKGATEWGPARGVAHMVEAILHDTGEVLPASVKLEGEFGHE 115
Query: 242 ELPFFASKVRLGKNGADEVLGLGPLSDYEKQGLESLKPELKASIEK 287
+ F V LG NG +E++ L DYE+ + +L +K
Sbjct: 116 D-TAFGVPVSLGSNGVEEIVEW-DLDDYEQDLMADAAEKLSDQYDK 159
>d1i0za2 d.162.1.1 (A:161-332) Lactate dehydrogenase {Human (Homo
sapiens), heart isoform (H chain) [TaxId: 9606]}
Length = 172
Score = 90.7 bits (224), Expect = 7e-23
Identities = 28/171 (16%), Positives = 55/171 (32%), Gaps = 16/171 (9%)
Query: 127 TTLDVVRAKTFYAGKVNVPVAEVNVPVIGGHAGVTILPLFSQATPKSNNLSD-------- 178
LD R + A K+ + + + ++G H G + + ++S +L +
Sbjct: 3 CNLDSARFRYLMAEKLGIHPSSCHGWILGEH-GDSSVAVWSGVNVAGVSLQELNPEMGTD 61
Query: 179 ---EEIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAVFADACLMGLNGVPDIVECTF 235
E K + K + EV++ K A ++ L L+ + +
Sbjct: 62 NDSENWKEVHKMVVESAYEVIKLKGYTNWAIGLSVA---DLIESMLKNLSRIHPVSTMVK 118
Query: 236 VQSSVTELPFFASKVRLGKNGADEVLGLGPLSDYEKQGLESLKPELKASIE 286
+ F + L G V+ L D E L+ L +
Sbjct: 119 GMYGIENEVFLSLPCILNARGLTSVINQ-KLKDDEVAQLKKSADTLWDIQK 168
>d1hyha2 d.162.1.1 (A:167-329) L-2-hydroxyisocapronate
dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId:
1583]}
Length = 163
Score = 89.5 bits (221), Expect = 2e-22
Identities = 25/169 (14%), Positives = 59/169 (34%), Gaps = 16/169 (9%)
Query: 127 TTLDVVRAKTFYAGKVNVPVAEVNVPVIGGHAGVTILPLFSQATPKSNNLSD------EE 180
T LD R + ++ V+ +G H G + +S + +
Sbjct: 2 TLLDTARMQRAVGEAFDLDPRSVSGYNLGEH-GNSQFVAWSTVRVMGQPIVTLADAGDID 60
Query: 181 IKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAVFADACLMGLNGVPDIVECTFVQSSV 240
+ A+ + + GG V+ GKG + +A + A A + + +
Sbjct: 61 LAAIEEEARKGGFTVL---NGKGYTSYGVATSAIRIAKAVMADAHAELVVSNRRDDMG-- 115
Query: 241 TELPFFASKVRLGKNGADEVLGLGPLSDYEKQGLESLKPELKASIEKGI 289
+ + +G++G L L+ E++ L + ++ ++ +
Sbjct: 116 ---MYLSYPAIIGRDGVLAETTL-DLTTDEQEKLLQSRDYIQQRFDEIV 160
>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum
vulgare), chloroplast [TaxId: 4558]}
Length = 175
Score = 89.3 bits (221), Expect = 2e-22
Identities = 21/114 (18%), Positives = 36/114 (31%), Gaps = 4/114 (3%)
Query: 1 MKLDPLVSSLSLYDIANTPGVAADVSHINSPAQVEGYAGEE---QLGKALEGSDVVIIPA 57
+ +L L + V+ + + E D ++
Sbjct: 49 VFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGIDPYEVFEDVDWALLIG 108
Query: 58 GVPRKPGMTRDDLFNINAGIVKSLCTAIANYCP-HALVNMISNPVNSTVPIAAE 110
PR PGM R L +IN I A+ + V ++ NP N+ I +
Sbjct: 109 AKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGNPCNTNALICLK 162
>d2ldxa2 d.162.1.1 (A:160-331) Lactate dehydrogenase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 172
Score = 89.1 bits (220), Expect = 2e-22
Identities = 29/169 (17%), Positives = 57/169 (33%), Gaps = 10/169 (5%)
Query: 127 TTLDVVRAKTFYAGKVNVPVAEVNVPVIGGHAGVTILPLFSQATPKSNNLSDEEIKALTK 186
LD R + K+ V + V+G H G + +P++S L T
Sbjct: 3 CNLDSARFRYLIGEKLGVNPTSCHGWVLGEH-GDSSVPIWSGVNVAGVTLKSLNPAIGTD 61
Query: 187 RTQDGGTEVV--------EAKAGKGSATLSMAYAGAVFADACLMGLNGVPDIVECTFVQS 238
+ + V E KG + ++ + A + L L V +
Sbjct: 62 KNKQHWKNVHKQVVEGGYEVLDMKGYTSWAIGLSVTDLARSILKNLKRVHPVTTLVKGFH 121
Query: 239 SVTELPFFASKVRLGKNGADEVLGLGPLSDYEKQGLESLKPELKASIEK 287
+ E F + LG++G + + + ++ E+ L+ L +
Sbjct: 122 GIKEEVFLSIPCVLGESGITDFVKV-NMTAEEEGLLKKSADTLWNMQKN 169
>d1ez4a2 d.162.1.1 (A:163-334) Lactate dehydrogenase {Lactobacillus
pentosus [TaxId: 1589]}
Length = 171
Score = 88.3 bits (218), Expect = 5e-22
Identities = 27/175 (15%), Positives = 59/175 (33%), Gaps = 21/175 (12%)
Query: 127 TTLDVVRAKTFYAGKVNVPVAEVNVPVIGGHAGVTILPLFSQATPKSNNLSD-------- 178
T+LD R + + NV V+ ++G H G + +S AT + + D
Sbjct: 1 TSLDSSRLRVALGKQFNVDPRSVDAYIMGEH-GDSEFAAYSTATIGTRPVRDVAKEQGVS 59
Query: 179 -EEIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAVFADACLMGLNGVPDIVECTFVQ 237
+++ L ++ +++ K + Y + + V
Sbjct: 60 DDDLAKLEDGVRNKAYDIINLKG-------ATFYGIGTALMRISKAILRDENAVLPVGAY 112
Query: 238 SSVT---ELPFFASKVRLGKNGADEVLGLGPLSDYEKQGLESLKPELKASIEKGI 289
+ + +G G +++ PLS E + ++ LK + G+
Sbjct: 113 MDGQYGLNDIYIGTPAIIGGTGLKQIIES-PLSADELKKMQDSAATLKKVLNDGL 166
>d1ldna2 d.162.1.1 (A:163-330) Lactate dehydrogenase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 168
Score = 88.4 bits (218), Expect = 5e-22
Identities = 24/172 (13%), Positives = 53/172 (30%), Gaps = 14/172 (8%)
Query: 127 TTLDVVRAKTFYAGKVNVPVAEVNVPVIGGHAGVTILPLFSQATPKSNN---------LS 177
T LD R + +V V+ +IG H + +
Sbjct: 1 TILDTARFRFLLGEYFSVAPQNVHAYIIGEHGDTELPVWSQAYIGVMPIRKLVESKGEEA 60
Query: 178 DEEIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAVFADACLMGLNGVPDIVECTFVQ 237
++++ + +D +++E K + V ++ + +
Sbjct: 61 QKDLERIFVNVRDAAYQIIEKKGATYYGIAMGLARVTRAILHNENAILTVSAYLDGLYGE 120
Query: 238 SSVTELPFFASKVRLGKNGADEVLGLGPLSDYEKQGLESLKPELKASIEKGI 289
V + + +NG EV+ + L+D EK LK+ + +
Sbjct: 121 RDV----YIGVPAVINRNGIREVIEI-ELNDDEKNRFHHSAATLKSVLARAF 167
>d1y7ta2 d.162.1.1 (A:154-332) Malate dehydrogenase {Thermus
thermophilus [TaxId: 274]}
Length = 173
Score = 87.1 bits (215), Expect = 1e-21
Identities = 29/165 (17%), Positives = 50/165 (30%), Gaps = 6/165 (3%)
Query: 127 TTLDVVRAKTFYAGKVNVPVAEVNVPVIGGHAGVTILPLFSQATPKSNNLSD---EEIKA 183
T LD RAK A K V + + G+ T+ P A + E
Sbjct: 2 TRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHSSTMFPDLFHAEVDGRPALELVDMEWYE 61
Query: 184 LTKRTQDGGTEVVEAKAGKGSATLSMAYAGAVFADACLMGLNGVPDIVECTFV--QSSVT 241
+A S+ S A A +G + + +
Sbjct: 62 KVFIPTVAQRGAAIIQARGASSAASAANAAIEHIRDWALGTPEGDWVSMAVPSQGEYGIP 121
Query: 242 ELPFFASKVRLGKNGADEVLGLGPLSDYEKQGLESLKPELKASIE 286
E ++ V V GL ++++ ++ +E EL +E
Sbjct: 122 EGIVYSFPVTAKDGAYRVVEGL-EINEFARKRMEITAQELLDEME 165
>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium
longum, strain am101-2 [TaxId: 216816]}
Length = 143
Score = 85.8 bits (212), Expect = 2e-21
Identities = 33/127 (25%), Positives = 57/127 (44%), Gaps = 7/127 (5%)
Query: 1 MKLDPLVSSLSLYDIAN--TPGVAADVSHINSPAQVEGYAGEEQLGKALEGSDVVIIPAG 58
+ + L DIA D+ H +S G + + +D+V+I AG
Sbjct: 20 AAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDP-EICRDADMVVITAG 78
Query: 59 VPRKPGMTRDDLFNINAGIVKSLCTAIANYCPHALVNMISNPVNSTVPIAAEVFKKAGTY 118
+KPG +R +L I+K++ + P+A+ +I+NPV+ IA V +K
Sbjct: 79 PRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLITNPVD----IATHVAQKLTGL 134
Query: 119 DEKKLFG 125
E ++FG
Sbjct: 135 PENQIFG 141
>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium
vibrioforme [TaxId: 1098]}
Length = 142
Score = 85.1 bits (210), Expect = 4e-21
Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 6/128 (4%)
Query: 1 MKLDPLVSSLSLYDI--ANTPGVAADVSHINSPAQVEGYAGEEQLGKALEGSDVVIIPAG 58
+ L L L D+ G A D+ + SD+VII AG
Sbjct: 19 LAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYADTANSDIVIITAG 78
Query: 59 VPRKPGMTRDDLFNINAGIVKSLCTAIANYCPHALVNMISNPVNSTVPIAAEVFKKAGTY 118
+PRKPGMTR+DL NAGIVK + I + + ++ ++SNP++ +A
Sbjct: 79 LPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSNPLDIMTHVA----WVRSGL 134
Query: 119 DEKKLFGV 126
++++ G+
Sbjct: 135 PKERVIGM 142
>d1hyea2 d.162.1.1 (A:146-313) MJ0490, lactate/malate dehydrogenase
{Archaeon Methanococcus jannaschii [TaxId: 2190]}
Length = 168
Score = 85.3 bits (210), Expect = 7e-21
Identities = 28/163 (17%), Positives = 54/163 (33%), Gaps = 3/163 (1%)
Query: 127 TTLDVVRAKTFYAGKVNVPVAEVNVPVIGGHAGVTILPLFSQATPKSN--NLSDEEIKAL 184
T LD +R K A V + EV +IG H + L + + + +
Sbjct: 3 THLDSLRFKVAIAKFFGVHIDEVRTRIIGEHGDSMVPLLSATSIGGIPIQKFERFKELPI 62
Query: 185 TKRTQDGGTEVVEAKAGKGSATLSMAYAGAVFADACLMGLNGVPDIVECTFVQSSVTELP 244
+ +D T+ + KG + A A + + + +
Sbjct: 63 DEIIEDVKTKGEQIIRLKGGSEFGPAAAILNVVRCIVNNEKRLLTLSAYVDGEFDGIRDV 122
Query: 245 FFASKVRLGKNGADEVLGLGPLSDYEKQGLESLKPELKASIEK 287
V++G++G +EV+ + L E +K E+
Sbjct: 123 CIGVPVKIGRDGIEEVVSI-ELDKDEIIAFRKSAEIIKKYCEE 164
>d1b8pa2 d.162.1.1 (A:159-329) Malate dehydrogenase {Aquaspirillum
arcticum [TaxId: 87645]}
Length = 171
Score = 84.9 bits (209), Expect = 1e-20
Identities = 29/163 (17%), Positives = 50/163 (30%), Gaps = 6/163 (3%)
Query: 129 LDVVRAKTFYAGKVNVPVAEVNVPVIGGHAGVTILPLFSQATPKSNNLS----DEEIKAL 184
LD RA + A K PV+ + + G+ T+ + A ++ D+
Sbjct: 3 LDHNRALSQIAAKTGKPVSSIEKLFVWGNHSPTMYADYRYAQIDGASVKDMINDDAWNRD 62
Query: 185 TKRTQDGGTEVVEAKAGKGSATLSMAYAGAVFADACLMGLNGVPDIV-ECTFVQSSVTEL 243
T G A S+ S A A ++G G + + + E
Sbjct: 63 TFLPTVGKRGAAIIDARGVSSAASAANAAIDHIHDWVLGTAGKWTTMGIPSDGSYGIPEG 122
Query: 244 PFFASKVRLGKNGADEVLGLGPLSDYEKQGLESLKPELKASIE 286
F V V GL + + ++ + EL
Sbjct: 123 VIFGFPVTTENGEYKIVQGL-SIDAFSQERINVTLNELLEEQN 164
>d1t2da2 d.162.1.1 (A:151-315) Lactate dehydrogenase {Malaria
parasite (Plasmodium falciparum) [TaxId: 5833]}
Length = 165
Score = 84.1 bits (207), Expect = 1e-20
Identities = 39/162 (24%), Positives = 65/162 (40%), Gaps = 13/162 (8%)
Query: 129 LDVVRAKTFYAGKVNVPVAEVNVPVIGGHAGVTILPLFSQATP--------KSNNLSDEE 180
LD R K + + K+NV +VN ++G H +L + +SD E
Sbjct: 3 LDTSRLKYYISQKLNVCPRDVNAHIVGAHGNKMVLLKRYITVGGIPLQEFINNKLISDAE 62
Query: 181 IKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAVFADACLMGLNGVPDIVECTFVQSSV 240
++A+ RT + E+V A A + A L + ++E + S +
Sbjct: 63 LEAIFDRTVNTALEIVNLHASPYVAPAAAIIEMAESYLKDLKKVLICSTLLEGQYGHSDI 122
Query: 241 TELPFFASKVRLGKNGADEVLGLGPLSDYEKQGLESLKPELK 282
F + V LG NG ++V+ L L+ EK + E K
Sbjct: 123 ----FGGTPVVLGANGVEQVIEL-QLNSEEKAKFDEAIAETK 159
>d1y6ja2 d.162.1.1 (A:149-317) Lactate dehydrogenase {Clostridium
thermocellum [TaxId: 1515]}
Length = 169
Score = 84.1 bits (207), Expect = 2e-20
Identities = 33/172 (19%), Positives = 66/172 (38%), Gaps = 17/172 (9%)
Query: 127 TTLDVVRAKTFYAGKVNVPVAEVNVPVIGGHAGVTILPLFSQATPKSNNLSD-------- 178
T LD +R + + K+ V V V+ +IG H G + LPL+S N+++
Sbjct: 1 TVLDSIRFRYLLSEKLGVDVKNVHGYIIGEH-GDSQLPLWSCTHIAGKNINEYIDDPKCN 59
Query: 179 ---EEIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAVFADACLMGLNGVPDIVECTF 235
E+ K + + + G + KG+ +A + + L N + +
Sbjct: 60 FTEEDKKKIAEDVKTAGATI---IKNKGATYYGIAVSINTIVETLLKNQNTIRTVGTVIN 116
Query: 236 VQSSVTELPFFASKVRLGKNGADEVLGLGPLSDYEKQGLESLKPELKASIEK 287
+ + + + G EVL L+ E++ L ++K + +
Sbjct: 117 GMYGIED-VAISLPSIVNSEGVQEVLQF-NLTPEEEEALRFSAEQVKKVLNE 166
>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa)
[TaxId: 9823]}
Length = 154
Score = 83.6 bits (206), Expect = 2e-20
Identities = 28/118 (23%), Positives = 42/118 (35%), Gaps = 4/118 (3%)
Query: 1 MKLDPLVSSLSLYDIANTPGVAADVSHINSPAQVEGYA---GEEQLGKALEGSDVVIIPA 57
+ L L DI GV V + ++ A + DV I+
Sbjct: 28 VFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEEIAFKDLDVAILVG 87
Query: 58 GVPRKPGMTRDDLFNINAGIVKSLCTAIANYCP-HALVNMISNPVNSTVPIAAEVFKK 114
+PR+ GM R DL N I K A+ Y V ++ NP N+ A++
Sbjct: 88 SMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGNPANTNCLTASKSAPS 145
>d7mdha2 d.162.1.1 (A:198-385) Malate dehydrogenase {Sorghum
(Sorghum vulgare), chloroplast [TaxId: 4558]}
Length = 188
Score = 83.2 bits (205), Expect = 6e-20
Identities = 32/166 (19%), Positives = 57/166 (34%), Gaps = 11/166 (6%)
Query: 127 TTLDVVRAKTFYAGKVNVPVAEVNVPVIGGHAGVTILPLFSQATPKSNNLSDEE------ 180
T LD RAK A K V +V+ I G+ T +P F A + +
Sbjct: 1 TRLDENRAKCQLALKAGVFYDKVSNVTIWGNHSTTQVPDFLNAKIDGRPVKEVIKRTKWL 60
Query: 181 IKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAVFADACLMGLNGVPDIVECTFVQSS- 239
+ T Q G +++ S+ S A + A + + + +
Sbjct: 61 EEEFTITVQKRGGALIQKW--GRSSAASTAVSIADAIKSLVTPTPEGDWFSTGVYTTGNP 118
Query: 240 --VTELPFFASKVRLGKNGADEVLGLGPLSDYEKQGLESLKPELKA 283
+ E F+ R +G E+ D+ + ++ + EL A
Sbjct: 119 YGIAEDIVFSMPCRSKGDGDYELATDVSNDDFLWERIKKSEAELLA 164
>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus
aurantiacus [TaxId: 1108]}
Length = 142
Score = 80.9 bits (199), Expect = 1e-19
Identities = 33/126 (26%), Positives = 63/126 (50%), Gaps = 5/126 (3%)
Query: 1 MKLDPLVSSLSLYDIANTP-GVAADVSHINSPAQVEGYAGEEQLGKALEGSDVVIIPAGV 59
+ L + L + P G A D+ + + SDV+++ +G
Sbjct: 20 LAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYADTANSDVIVVTSGA 79
Query: 60 PRKPGMTRDDLFNINAGIVKSLCTAIANYCPHALVNMISNPVNSTVPIAAEVFKKAGTYD 119
PRKPGM+R+DL +NA I ++ + A P+A++ M++NP+++ +AAEV +
Sbjct: 80 PRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVNNPLDAMTYLAAEVSG----FP 135
Query: 120 EKKLFG 125
++++ G
Sbjct: 136 KERVIG 141
>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium
thermocellum [TaxId: 1515]}
Length = 142
Score = 80.8 bits (199), Expect = 2e-19
Identities = 38/128 (29%), Positives = 59/128 (46%), Gaps = 10/128 (7%)
Query: 1 MKLDPLVSSLSLYDIANTP--GVAADVSH-INSPAQVEGYAGEEQLGKALEGSDVVIIPA 57
M L + L L D+ G A D++H + Q+ YAG+ ++ DV+++ A
Sbjct: 20 MALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDY---SDVKDCDVIVVTA 76
Query: 58 GVPRKPGMTRDDLFNINAGIVKSLCTAIANYCPHALVNMISNPVNSTVPIAAEVFKKAGT 117
G RKPG TR DL N I K + I Y H ++ ++SNPV+ + +K
Sbjct: 77 GANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVSNPVDIITYMI----QKWSG 132
Query: 118 YDEKKLFG 125
K+ G
Sbjct: 133 LPVGKVIG 140
>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga
maritima [TaxId: 2336]}
Length = 140
Score = 79.7 bits (196), Expect = 3e-19
Identities = 35/125 (28%), Positives = 58/125 (46%), Gaps = 4/125 (3%)
Query: 1 MKLDPLVSSLSLYDIANTPGVAADVSHINSPAQVEGYAGEEQLGKALEGSDVVIIPAGVP 60
+ + + L D+ + I+ L+GSDVVI+ AGVP
Sbjct: 19 LLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDYADLKGSDVVIVAAGVP 78
Query: 61 RKPGMTRDDLFNINAGIVKSLCTAIANYCPHALVNMISNPVNSTVPIAAEVFKKAGTYDE 120
+KPG TR L NA ++K + ++ Y P ++V +++NPV+ + F K D
Sbjct: 79 QKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVTNPVD----VLTYFFLKESGMDP 134
Query: 121 KKLFG 125
+K+FG
Sbjct: 135 RKVFG 139
>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus
thermophilus [TaxId: 274]}
Length = 154
Score = 79.0 bits (194), Expect = 9e-19
Identities = 27/124 (21%), Positives = 44/124 (35%), Gaps = 5/124 (4%)
Query: 1 MKLDPLVSSLSLYDIAN-TPGVAADVSHINSPAQVEGYAGEEQLGKALEGSDVVIIPAGV 59
K P++ L A + + G + A + +D ++
Sbjct: 31 GKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKVAFKDADYALLVGAA 90
Query: 60 PRKPGMTRDDLFNINAGIVKSLCTAIANYCP-HALVNMISNPVNSTVPIAAEVFKKAGTY 118
PRK GM R DL +N I A+A V ++ NP N+ IA +K A
Sbjct: 91 PRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNALIA---YKNAPGL 147
Query: 119 DEKK 122
+ +
Sbjct: 148 NPRN 151
>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite
(Plasmodium falciparum) [TaxId: 5833]}
Length = 150
Score = 78.6 bits (193), Expect = 1e-18
Identities = 36/127 (28%), Positives = 57/127 (44%), Gaps = 11/127 (8%)
Query: 7 VSSLSLYDIAN--TPGVAADVSHINSPAQVEGYAGEEQLGKALEGSDVVIIPAGVPRKPG 64
+ + L+DI G A D SH N A L G+DVVI+ AG + PG
Sbjct: 27 LGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTYDDLAGADVVIVTAGFTKAPG 86
Query: 65 MT-----RDDLFNINAGIVKSLCTAIANYCPHALVNMISNPVNSTVPIAAEVFKKAGTYD 119
+ RDDL +N I+ + I CP+A + +++NPV+ V + +
Sbjct: 87 KSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVTNPVDVMVQLL----HQHSGVP 142
Query: 120 EKKLFGV 126
+ K+ G+
Sbjct: 143 KNKIIGL 149
>d1pzga2 d.162.1.1 (A:164-334) Lactate dehydrogenase {Toxoplasma
gondii [TaxId: 5811]}
Length = 174
Score = 79.1 bits (194), Expect = 1e-18
Identities = 32/166 (19%), Positives = 67/166 (40%), Gaps = 11/166 (6%)
Query: 129 LDVVRAKTFYAGKVNVPVAEVNVPVIGGHAGVTILPLFSQATP--------KSNNLSDEE 180
LD R + + A ++V +V VIG H + + K +++++
Sbjct: 4 LDSGRFRRYVADALSVSPRDVQATVIGTHGDCMVPLVRYITVNGYPIQKFIKDGVVTEKQ 63
Query: 181 IKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAVFADACLMGLNGVPDIVECTFVQSSV 240
++ + + T+ G E+V G+GSA + A + A + L V + +
Sbjct: 64 LEEIAEHTKVSGGEIVRFL-GQGSAYYAPAASAVAMATSFLNDEKRVIPCSVYCNGEYGL 122
Query: 241 TELPFFASKVRLGKNGADEVLGLGPLSDYEKQGLESLKPELKASIE 286
+ F +G G + V+ L L++ EK+ + ++ A +
Sbjct: 123 KD-MFIGLPAVIGGAGIERVIEL-ELNEEEKKQFQKSVDDVMALNK 166
>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon
Haloarcula marismortui [TaxId: 2238]}
Length = 142
Score = 76.9 bits (189), Expect = 4e-18
Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 12/130 (9%)
Query: 1 MKLDPLVSSLSLYDIAN----TPGVAADVSH-INSPAQVEGYAGEEQLGKALEGSDVVII 55
+ L + + DI + T G AAD +H I + G + GSDVV+I
Sbjct: 20 IALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYE---DTAGSDVVVI 76
Query: 56 PAGVPRKPGMTRDDLFNINAGIVKSLCTAIANYCPHALVNMISNPVNSTVPIAAEVFKKA 115
AG+PR+PG TR DL NA I++ + +++ + + SNPV+ + +A
Sbjct: 77 TAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSNPVD----LLNRHLYEA 132
Query: 116 GTYDEKKLFG 125
G +++ G
Sbjct: 133 GDRSREQVIG 142
>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga
maritima [TaxId: 2336]}
Length = 162
Score = 74.3 bits (182), Expect = 6e-17
Identities = 18/144 (12%), Positives = 37/144 (25%), Gaps = 27/144 (18%)
Query: 2 KLDPLVSSLSLYDIANTP-GVAADVSHINSPAQVEGYAGEEQLGKALEGSDVVIIPAGVP 60
D + + YDI + D + + + A+ + VI
Sbjct: 24 SEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLISDT-FEGAVVDAKYVIFQFRPG 82
Query: 61 RKPGMTRDDLFNINAGIVKSLCTAIAN-------------------YCPHALVNMISNPV 101
G D+ + G++ T + +A + +NP
Sbjct: 83 GLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPIVEEYVDTVRKTSNATIVNFTNPS 142
Query: 102 NSTVPIAAEVFKKAGTYDEKKLFG 125
E + + +K G
Sbjct: 143 G----HITEFVRNY--LEYEKFIG 160
>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii
[TaxId: 5811]}
Length = 154
Score = 72.8 bits (178), Expect = 2e-16
Identities = 34/132 (25%), Positives = 56/132 (42%), Gaps = 11/132 (8%)
Query: 1 MKLDPLVSSLSLYDIANTP-GVAADVSHINSPAQVEG-YAGEEQLGKALEGSDVVIIPAG 58
L L + + P G A D+SH+ S E AL G+D VI+ AG
Sbjct: 26 CALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVIVTAG 85
Query: 59 VPRKPG-----MTRDDLFNINAGIVKSLCTAIANYCPHALVNMISNPVNSTVPIAAEVFK 113
+ + PG +R+DL N+ I++ + I YCP + +++NP++ V + E
Sbjct: 86 LTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVTNPLDCMVKVMCEASG 145
Query: 114 KAGTYDEKKLFG 125
+ G
Sbjct: 146 ----VPTNMICG 153
>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus
pentosus [TaxId: 1589]}
Length = 146
Score = 72.0 bits (176), Expect = 3e-16
Identities = 25/125 (20%), Positives = 50/125 (40%), Gaps = 4/125 (3%)
Query: 1 MKLDPLVSSLSLYDIANTPGVAADVSHINSPAQVEGYAGEEQLGKALEGSDVVIIPAGVP 60
M + + D+ + ++ A + +D+V+I AG P
Sbjct: 24 MAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYSDCKDADLVVITAGAP 83
Query: 61 RKPGMTRDDLFNINAGIVKSLCTAIANYCPHALVNMISNPVNSTVPIAAEVFKKAGTYDE 120
+KPG +R DL N N I+ S+ + + + + +NPV+ I K + +
Sbjct: 84 QKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAANPVD----ILTYATWKFSGFPK 139
Query: 121 KKLFG 125
+++ G
Sbjct: 140 ERVIG 144
>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 159
Score = 70.4 bits (172), Expect = 1e-15
Identities = 30/127 (23%), Positives = 48/127 (37%), Gaps = 7/127 (5%)
Query: 1 MKLDPLVSSLSLYDIANTP--GVAADVSHINSPAQVEGYAGEEQLGKALEGSDVVIIPAG 58
+ L L L+L D G A D+ H S + S +VII AG
Sbjct: 38 ILLKGLADELALVDADTDKLRGEALDLQH-GSLFLSTPKIVFGKDYNVSANSKLVIITAG 96
Query: 59 VPRKPGMTRDDLFNINAGIVKSLCTAIANYCPHALVNMISNPVNSTVPIAAEVFKKAGTY 118
G TR DL N I+K++ + P + +++NPV+ + K +
Sbjct: 97 ARMVSGQTRLDLLQRNVAIMKAIVPGVIQNSPDCKIIVVTNPVDILTYVVW----KISGF 152
Query: 119 DEKKLFG 125
++ G
Sbjct: 153 PVGRVIG 159
>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo
sapiens), heart isoform (H chain) [TaxId: 9606]}
Length = 160
Score = 70.5 bits (172), Expect = 1e-15
Identities = 27/127 (21%), Positives = 52/127 (40%), Gaps = 7/127 (5%)
Query: 1 MKLDPLVSSLSLYDIAN--TPGVAADVSHINSPAQVEGYAGEEQLGKALEGSDVVIIPAG 58
+ L L+L D+ G D+ H + Q + + S +V++ AG
Sbjct: 39 ILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVAD-KDYSVTANSKIVVVTAG 97
Query: 59 VPRKPGMTRDDLFNINAGIVKSLCTAIANYCPHALVNMISNPVNSTVPIAAEVFKKAGTY 118
V ++ G +R +L N + K + I Y P ++ ++SNPV+ + K
Sbjct: 98 VRQQEGESRLNLVQRNVNVFKFIIPQIVKYSPDCIIIVVSNPVDILTYVT----WKLSGL 153
Query: 119 DEKKLFG 125
+ ++ G
Sbjct: 154 PKHRVIG 160
>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 148
Score = 69.7 bits (170), Expect = 2e-15
Identities = 29/127 (22%), Positives = 49/127 (38%), Gaps = 7/127 (5%)
Query: 1 MKLDPLVSSLSLYDIANTP--GVAADVSHINSPAQVEGYAGEEQLGKALEGSDVVIIPAG 58
+ + + L D + G A D +H A +D+V+I AG
Sbjct: 25 LMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGD-YDDCRDADLVVICAG 83
Query: 59 VPRKPGMTRDDLFNINAGIVKSLCTAIANYCPHALVNMISNPVNSTVPIAAEVFKKAGTY 118
+KPG TR DL + N I +S+ ++ L + +NPV+ I K
Sbjct: 84 ANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVATNPVD----ILTYATWKFSGL 139
Query: 119 DEKKLFG 125
+++ G
Sbjct: 140 PHERVIG 146
>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase,
L-HICDH {Lactobacillus confusus [TaxId: 1583]}
Length = 146
Score = 67.8 bits (165), Expect = 1e-14
Identities = 25/130 (19%), Positives = 48/130 (36%), Gaps = 9/130 (6%)
Query: 1 MKLDPLVSSLSLYDIANTPGVAADVSHINSPAQVEGYAGE-EQLGKALEGSDVVIIPAGV 59
+ + D A + ++ A +E + AL +DVVI G
Sbjct: 20 LIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDWAALADADVVISTLGN 79
Query: 60 PR----KPGMTRDDLFNINAGIVKSLCTAIANYCPHALVNMISNPVNSTVPIAAEVFKKA 115
+ P R + +V+S+ T + H ++ +ISNPV+ + +F+
Sbjct: 80 IKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVISNPVD----VITALFQHV 135
Query: 116 GTYDEKKLFG 125
+ K+ G
Sbjct: 136 TGFPAHKVIG 145
>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 169
Score = 65.5 bits (159), Expect = 1e-13
Identities = 21/144 (14%), Positives = 39/144 (27%), Gaps = 31/144 (21%)
Query: 7 VSSLSLYDIANTP--GVAADVSH---INSPAQVEGYAGEEQLGKALEGSDVVIIPAGVPR 61
V L L DI + +AL+G+D V V
Sbjct: 30 VGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLDRRRALDGADFVTTQFRVGG 89
Query: 62 KPGMTRDDLFNINAGIV--------------------KSLCTAIANYCPHALVNMISNPV 101
+D+ + G++ + + CP A + +NP
Sbjct: 90 LEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINFTNPA 149
Query: 102 NSTVPIAAEVFKKAGTYDEKKLFG 125
+ E + ++K+ G
Sbjct: 150 G----MVTEAVLRY--TKQEKVVG 167
>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA
{Bacillus subtilis [TaxId: 1423]}
Length = 167
Score = 64.7 bits (157), Expect = 2e-13
Identities = 22/133 (16%), Positives = 37/133 (27%), Gaps = 25/133 (18%)
Query: 7 VSSLSLYDI----ANTPGVAADVSHINSPAQVEGYAGEEQLGKALEGSDVVIIPAGVPRK 62
+ L LYD + A DV +E A + +A D V+ V +
Sbjct: 32 IRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTDP-EEAFTDVDFVMAHIRVGKY 90
Query: 63 PGMTRDDLFNINAGIV--------------------KSLCTAIANYCPHALVNMISNPVN 102
D+ + G+V + + Y P A + SNP
Sbjct: 91 AMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNYSNPAA 150
Query: 103 STVPIAAEVFKKA 115
+ +
Sbjct: 151 IVAEATRRLRPNS 163
>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase
{Archaeon Methanococcus jannaschii [TaxId: 2190]}
Length = 145
Score = 60.9 bits (147), Expect = 3e-12
Identities = 34/131 (25%), Positives = 56/131 (42%), Gaps = 11/131 (8%)
Query: 1 MKLDPLVSSLSLYDIANTPGVAADVSHINS------PAQVEGYAGEEQLGKALEGSDVVI 54
+ +P + L L ++ + + Y ++ + ++ SDVVI
Sbjct: 20 LAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRIIDESDVVI 79
Query: 55 IPAGVPRKPGMTRDDLFNINAGIVKSLCTAIANYCPHALVNMISNPVNSTVPIAAEVFKK 114
I +GVPRK GM+R DL NA IV IA C + +I+NPV+ A
Sbjct: 80 ITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEICDTKIF-VITNPVDVMTYKAL----V 134
Query: 115 AGTYDEKKLFG 125
++ ++FG
Sbjct: 135 DSKFERNQVFG 145
>d1ojua2 d.162.1.1 (A:164-331) Lactate dehydrogenase {Archaeon
Archaeoglobus fulgidus [TaxId: 2234]}
Length = 152
Score = 60.4 bits (146), Expect = 6e-12
Identities = 34/164 (20%), Positives = 59/164 (35%), Gaps = 19/164 (11%)
Query: 127 TTLDVVRAKTFYAGKVNVPVAEVNVPVIGGHAGVTILPLFSQATPKSNNLSDEEIKALTK 186
LD R K + +IG H G ++ S A + + +A+
Sbjct: 2 NQLDSQRLKERLYNAGARNI--RRAWIIGEH-GDSMFVAKSLADFDG----EVDWEAVEN 54
Query: 187 RTQDGGTEVVEAKAGKGSATLSMAYAGAVFADACLMGLNGVPDI---VECTFVQSSVTEL 243
+ EV++ KG+ A A A + + ++ + +V
Sbjct: 55 DVRFVAAEVIK---RKGATIFGPAVAIYRMVKAVVEDTGEIIPTSMILQGEYGIENV--- 108
Query: 244 PFFASKVRLGKNGADEVLGLGPLSDYEKQGLESLKPELKASIEK 287
+LGKNGA EV + LSD E + L + L+ +E+
Sbjct: 109 -AVGVPAKLGKNGA-EVADI-KLSDEEIEKLRNSAKILRERLEE 149
>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga
maritima [TaxId: 2336]}
Length = 171
Score = 58.2 bits (140), Expect = 4e-11
Identities = 15/136 (11%), Positives = 29/136 (21%), Gaps = 29/136 (21%)
Query: 7 VSSLSLYDIA--NTPGVAADVSHINSPAQVE-GYAGEEQLGKALEGSDVVIIPAGVPRKP 63
S+++L DI + + + L + +D VI A V
Sbjct: 31 GSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTMNLDDVIIDADFVINTAMVGGHT 90
Query: 64 GMTRDDLFNI--------------------------NAGIVKSLCTAIANYCPHALVNMI 97
+ + + I P A
Sbjct: 91 YLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWYLQA 150
Query: 98 SNPVNSTVPIAAEVFK 113
+NP+ +
Sbjct: 151 ANPIFEGTTLVTRTVP 166
>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase
(acylating) {Pseudomonas sp. [TaxId: 306]}
Length = 157
Score = 26.6 bits (58), Expect = 2.6
Identities = 5/18 (27%), Positives = 10/18 (55%)
Query: 94 VNMISNPVNSTVPIAAEV 111
VNM++ N + +A +
Sbjct: 127 VNMVTYAGNLDIMTSAAL 144
>d1qlma_ d.147.1.1 (A:) Methenyltetrahydromethanopterin
cyclohydrolase {Archaeon Methanopyrus kandleri [TaxId:
2320]}
Length = 316
Score = 26.2 bits (58), Expect = 5.2
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 8/45 (17%)
Query: 109 AEVFKKAGTYD----EKKLFG---VTTLDVVRAKTFYAGKVNVPV 146
++F++A YD + +F V D+ KT+ AG++NV V
Sbjct: 266 MKIFEEAD-YDFYKIDPGVFAPARVVVNDLSTGKTYTAGEINVDV 309
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.314 0.132 0.372
Gapped
Lambda K H
0.267 0.0548 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,027,708
Number of extensions: 46860
Number of successful extensions: 243
Number of sequences better than 10.0: 1
Number of HSP's gapped: 195
Number of HSP's successfully gapped: 53
Length of query: 295
Length of database: 2,407,596
Length adjustment: 85
Effective length of query: 210
Effective length of database: 1,240,546
Effective search space: 260514660
Effective search space used: 260514660
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 52 (24.2 bits)