Query         022548
Match_columns 295
No_of_seqs    141 out of 163
Neff          3.2 
Searched_HMMs 29240
Date          Mon Mar 25 07:17:37 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022548.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022548hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 2bez_C E2 glycoprotein; coiled  57.0      42  0.0014   26.1   7.1   41  193-233    30-74  (77)
  2 1qu7_A Methyl-accepting chemot  49.3      62  0.0021   28.1   7.9   48  196-243   175-222 (227)
  3 2d1l_A Metastasis suppressor p  49.0      68  0.0023   29.1   8.4   42  192-233    48-89  (253)
  4 1v9v_A KIAA0561 protein; helix  45.3      86  0.0029   25.9   7.6   46  210-255    44-107 (114)
  5 2ykt_A Brain-specific angiogen  34.3 1.1E+02  0.0038   27.4   7.3   12  222-233    75-86  (253)
  6 1wyy_A E2 glycoprotein; membra  33.9 1.2E+02  0.0042   26.0   7.1   39  194-232    44-86  (149)
  7 1zva_A E2 glycoprotein; membra  32.9      23 0.00079   27.5   2.2   37  195-231     2-42  (77)
  8 4ioe_A Secreted protein ESXB;   30.9 1.4E+02  0.0049   21.1   7.3   31  217-247    52-82  (93)
  9 2nox_A Tryptophan 2,3-dioxygen  30.9 2.1E+02  0.0072   26.3   8.7   37  215-251   214-250 (281)
 10 3odn_A Dally-like protein; alp  28.1 1.7E+02  0.0058   29.3   8.0   29  204-232    69-97  (506)
 11 1t72_A Phosphate transport sys  26.0 2.7E+02  0.0092   22.7   8.2   61  189-249     8-72  (227)
 12 2nyx_A Probable transcriptiona  23.4 2.6E+02  0.0088   21.7   7.0   21  228-248    64-84  (168)
 13 2a3q_A Hypothetical protein; M  22.5 2.3E+02   0.008   23.8   6.9   31  219-249    96-131 (170)
 14 1xly_A SHE2P, SHE2, YKL130C; b  21.7 1.3E+02  0.0043   27.5   5.3   46  195-247     9-57  (234)
 15 1t3j_A Mitofusin 1; coiled coi  21.3 2.2E+02  0.0076   22.6   6.1   54  195-248    28-95  (96)
 16 2d0t_A Indoleamine 2,3-dioxyge  21.2      75  0.0026   30.3   3.9   37  221-257   330-366 (406)
 17 3zbh_A ESXA; unknown function,  20.5 2.3E+02  0.0079   20.0   8.8   31  196-226    12-42  (99)

No 1  
>2bez_C E2 glycoprotein; coiled coil, membrane fusion, severe acute respiratory syndrome, viral protein; 1.6A {Sars coronavirus} SCOP: h.3.3.1 PDB: 1zv8_A 1zvb_A
Probab=57.03  E-value=42  Score=26.10  Aligned_cols=41  Identities=24%  Similarity=0.291  Sum_probs=23.6

Q ss_pred             HHHHHHHHHHHHHH----HHHHHHhhhHHHHHHHHHHHHHHHHHH
Q 022548          193 SALRVMQGVVNFFG----RISILIDQNTQAFHLFMTALLQLFDRS  233 (295)
Q Consensus       193 stFq~IeSIV~AFG----~fAqMLEST~~A~hsSF~AmlslaDr~  233 (295)
                      .+|+-|+.||+.=+    .+..-|..||+|+-++|.-+.+=+|.+
T Consensus        30 ~AL~kiQdVVN~q~~aL~~L~~qL~~NFgAISssi~dIy~RLd~l   74 (77)
T 2bez_C           30 TALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKV   74 (77)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhh
Confidence            34566666666433    334556666666666666655555543


No 2  
>1qu7_A Methyl-accepting chemotaxis protein I; serine, four helical-bundle, signaling protein; 2.60A {Escherichia coli} SCOP: h.4.5.1
Probab=49.28  E-value=62  Score=28.13  Aligned_cols=48  Identities=19%  Similarity=0.130  Sum_probs=30.4

Q ss_pred             HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 022548          196 RVMQGVVNFFGRISILIDQNTQAFHLFMTALLQLFDRSGMLYGELARF  243 (295)
Q Consensus       196 q~IeSIV~AFG~fAqMLEST~~A~hsSF~AmlslaDr~G~L~g~Larf  243 (295)
                      +.++.|...+..|+.+.+.+..+++..-.+.-.|.+....|...+.+|
T Consensus       175 ~~~~~i~~~i~~i~~~~~~~~~~~~~~~~~~~~L~~~a~~L~~~v~~F  222 (227)
T 1qu7_A          175 RGIDQVGLAVAEMDRVTQQNAALVEQSAAAAAALEEQASRLTEAVAVF  222 (227)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            345556666666666666666666665555556666666666666666


No 3  
>2d1l_A Metastasis suppressor protein 1; IRSP53, actin binding, IMD, protein binding; HET: MSE; 1.85A {Mus musculus}
Probab=48.97  E-value=68  Score=29.12  Aligned_cols=42  Identities=10%  Similarity=0.139  Sum_probs=23.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH
Q 022548          192 ISALRVMQGVVNFFGRISILIDQNTQAFHLFMTALLQLFDRS  233 (295)
Q Consensus       192 qstFq~IeSIV~AFG~fAqMLEST~~A~hsSF~AmlslaDr~  233 (295)
                      +++.++....++||..|+.+=..+-.++.-.-.+|+++||+-
T Consensus        48 ~~~~~a~~af~Da~qKvad~A~~s~g~s~elG~~L~~i~~~h   89 (253)
T 2d1l_A           48 RTTVVAAAAFLDAFQKVADMATNTRGGTREIGSALTRMCMRH   89 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTSSTHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHcccCCcchHHHHHHHHHHHHHH
Confidence            344445555566666666554444345566666666666653


No 4  
>1v9v_A KIAA0561 protein; helix bundle, MAST205, microtubule-associated serine/threonine protein kinase, structural genomics; NMR {Homo sapiens} SCOP: a.29.10.1
Probab=45.34  E-value=86  Score=25.91  Aligned_cols=46  Identities=15%  Similarity=0.277  Sum_probs=31.1

Q ss_pred             HHHhhhHHHHHHHHH------HHHHHHHHHHHHHHH------------HHHHHHHHhccccCCC
Q 022548          210 ILIDQNTQAFHLFMT------ALLQLFDRSGMLYGE------------LARFVLRLLGIKTKPK  255 (295)
Q Consensus       210 qMLEST~~A~hsSF~------AmlslaDr~G~L~g~------------LarfvlrlLg~~tk~r  255 (295)
                      |+||.--.+++-|=.      =+..|-|++..|..+            |.++|||||-|+.+|-
T Consensus        44 QiiElARDCL~KSr~~LITsrYF~El~E~LEkLl~ea~erSes~~~~~v~~lvkKlLiIIsRPA  107 (114)
T 1v9v_A           44 QIVELARDCLAKSGENLVTSRYFLEMQEKLERLLQDAHERSDSEEVSFIVQLVRKLLIIISRPA  107 (114)
T ss_dssp             HHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHSSCC
T ss_pred             HHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhhcCchhhhHHHHHHHHHHHHhccChH
Confidence            666666666655432      245577777777543            7889999999877653


No 5  
>2ykt_A Brain-specific angiogenesis inhibitor 1-associate protein 2; signaling protein, NPY motif, binding pocket; 2.11A {Homo sapiens} PDB: 1y2o_A 1wdz_A
Probab=34.32  E-value=1.1e+02  Score=27.44  Aligned_cols=12  Identities=17%  Similarity=0.232  Sum_probs=5.5

Q ss_pred             HHHHHHHHHHHH
Q 022548          222 FMTALLQLFDRS  233 (295)
Q Consensus       222 SF~AmlslaDr~  233 (295)
                      .-.+|.++||+.
T Consensus        75 lG~~L~~i~~~~   86 (253)
T 2ykt_A           75 LGDVLFQMAEVH   86 (253)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            334444555543


No 6  
>1wyy_A E2 glycoprotein; membrane fusion, severe acute respiratory syndrome, viral PR; 2.20A {Sars coronavirus} SCOP: h.3.3.1 PDB: 1wnc_A 2fxp_A
Probab=33.87  E-value=1.2e+02  Score=25.99  Aligned_cols=39  Identities=26%  Similarity=0.302  Sum_probs=21.7

Q ss_pred             HHHHHHHHHHHHH----HHHHHHhhhHHHHHHHHHHHHHHHHH
Q 022548          194 ALRVMQGVVNFFG----RISILIDQNTQAFHLFMTALLQLFDR  232 (295)
Q Consensus       194 tFq~IeSIV~AFG----~fAqMLEST~~A~hsSF~AmlslaDr  232 (295)
                      +|+-|+.||+.=+    .+..-|..||+|+-++|.-+.+=+|.
T Consensus        44 AL~kiQ~VVN~q~~aL~~l~~qL~~nFgAISssi~dIy~rLd~   86 (149)
T 1wyy_A           44 ALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDK   86 (149)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence            4555666665433    33445566666666666555554443


No 7  
>1zva_A E2 glycoprotein; membrane fusion, virus entry, coiled C conformational change, viral protein; 1.50A {Sars coronavirus} SCOP: h.3.3.1 PDB: 1zv8_B
Probab=32.90  E-value=23  Score=27.53  Aligned_cols=37  Identities=19%  Similarity=0.143  Sum_probs=25.8

Q ss_pred             HHHHHHHHHH----HHHHHHHHhhhHHHHHHHHHHHHHHHH
Q 022548          195 LRVMQGVVNF----FGRISILIDQNTQAFHLFMTALLQLFD  231 (295)
Q Consensus       195 Fq~IeSIV~A----FG~fAqMLEST~~A~hsSF~AmlslaD  231 (295)
                      |+-|+.||+.    +..+..-|..||+|+-++|.-+.+=+|
T Consensus         2 L~kiQdVVN~q~~aL~~L~~qL~~NFgAISSsi~dIy~rLd   42 (77)
T 1zva_A            2 LGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDISGGRG   42 (77)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence            4556777764    555567788899999888876665444


No 8  
>4ioe_A Secreted protein ESXB; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE; 1.44A {Bacillus anthracis} PDB: 4iog_A
Probab=30.92  E-value=1.4e+02  Score=21.12  Aligned_cols=31  Identities=10%  Similarity=-0.002  Sum_probs=14.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 022548          217 QAFHLFMTALLQLFDRSGMLYGELARFVLRL  247 (295)
Q Consensus       217 ~A~hsSF~AmlslaDr~G~L~g~Larfvlrl  247 (295)
                      .+|+.-|..+...++++-.+..+|.++|+++
T Consensus        52 ~af~~~~~~~~~~~~~~~~~L~~i~~~L~~~   82 (93)
T 4ioe_A           52 AKFRGEFIQSKQAMQQYIPILEGISTDLKRI   82 (93)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3444433333334444444555555555554


No 9  
>2nox_A Tryptophan 2,3-dioxygenase; helical bundle, heme protein, oxidoreductase; HET: HEM; 2.40A {Cupriavidus metallidurans}
Probab=30.85  E-value=2.1e+02  Score=26.25  Aligned_cols=37  Identities=16%  Similarity=0.047  Sum_probs=31.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 022548          215 NTQAFHLFMTALLQLFDRSGMLYGELARFVLRLLGIK  251 (295)
Q Consensus       215 T~~A~hsSF~AmlslaDr~G~L~g~LarfvlrlLg~~  251 (295)
                      .+.-++....+|+++.|.|-..|-.=.+.|.|+||.|
T Consensus       214 ~~~~~~~L~e~L~d~d~~~~~WR~~H~~~v~R~IG~k  250 (281)
T 2nox_A          214 AHWELYELGEKFVDLEDAFRQWRFRHVTTVERVIGFK  250 (281)
T ss_dssp             GGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            4567788899999999999888887888999999974


No 10 
>3odn_A Dally-like protein; alpha helical bundle, hedgehog signaling, hedgehog VIA CO- immunoprecipitation, membrane protein; 2.40A {Drosophila melanogaster}
Probab=28.12  E-value=1.7e+02  Score=29.34  Aligned_cols=29  Identities=24%  Similarity=0.290  Sum_probs=22.2

Q ss_pred             HHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Q 022548          204 FFGRISILIDQNTQAFHLFMTALLQLFDR  232 (295)
Q Consensus       204 AFG~fAqMLEST~~A~hsSF~AmlslaDr  232 (295)
                      ....+-.+|..++.+|.-+|..+|+.+++
T Consensus        69 ~s~~L~~~l~~~~~~F~e~F~~LL~~Se~   97 (506)
T 3odn_A           69 QISRMSGILGSKATKFKDIFTALLKESRT   97 (506)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            33445678888888888889888887766


No 11 
>1t72_A Phosphate transport system protein PHOU homolog; helix bundle, structural genomics, BSGC structure funded by NIH, protein structure initiative; 2.90A {Aquifex aeolicus} SCOP: a.7.12.1 PDB: 1t8b_A
Probab=26.02  E-value=2.7e+02  Score=22.74  Aligned_cols=61  Identities=15%  Similarity=0.227  Sum_probs=32.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 022548          189 GFWISALRVMQGVVNFFGRISILIDQNTQAFHL----FMTALLQLFDRSGMLYGELARFVLRLLG  249 (295)
Q Consensus       189 ~fwqstFq~IeSIV~AFG~fAqMLEST~~A~hs----SF~AmlslaDr~G~L~g~LarfvlrlLg  249 (295)
                      .|-+..-++.+.|+.....+..||+....|+..    ....++..=|++-.|..+|.+.+.++|.
T Consensus         8 ~~~~~l~~~~~~l~~M~~~v~~~l~~a~~al~~~d~~~a~~v~~~d~~iD~l~~~i~~~~~~~l~   72 (227)
T 1t72_A            8 KLFKELEETKEQVIKMAKLVQEAIDKATEALNKQNVELAEEVIKGDDTIDLLEVDIERRCIRMIA   72 (227)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHTHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence            343333344444444444445555555555521    2233444445577777777777777654


No 12 
>2nyx_A Probable transcriptional regulatory protein, RV14; alpha/beta, structural genomics, PSI-2; 2.30A {Mycobacterium tuberculosis}
Probab=23.37  E-value=2.6e+02  Score=21.71  Aligned_cols=21  Identities=29%  Similarity=0.267  Sum_probs=15.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHh
Q 022548          228 QLFDRSGMLYGELARFVLRLL  248 (295)
Q Consensus       228 slaDr~G~L~g~LarfvlrlL  248 (295)
                      +|+++++.=+..+.|.|++|.
T Consensus        64 eLa~~l~is~~tvs~~l~~Le   84 (168)
T 2nyx_A           64 TLATLLGVQPSATGRMVDRLV   84 (168)
T ss_dssp             HHHHHHTSCHHHHHHHHHHHH
T ss_pred             HHHHHhCCCHHHHHHHHHHHH
Confidence            366666666677888888884


No 13 
>2a3q_A Hypothetical protein; MM.29898, BC004623, 2410015N17RIK, structural genomics, PROT structure initiative, PSI; 2.32A {Mus musculus} SCOP: a.204.1.2 PDB: 2q4p_A
Probab=22.54  E-value=2.3e+02  Score=23.80  Aligned_cols=31  Identities=13%  Similarity=0.056  Sum_probs=21.2

Q ss_pred             HHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHhc
Q 022548          219 FHLFMTALLQLFDRSG-----MLYGELARFVLRLLG  249 (295)
Q Consensus       219 ~hsSF~AmlslaDr~G-----~L~g~LarfvlrlLg  249 (295)
                      +-=.++.+|.||++++     .|+..+.||.+|.-.
T Consensus        96 LGDVL~~lv~LA~~lgIDleeAl~~k~~K~~~Ryp~  131 (170)
T 2a3q_A           96 LSDVLIYLVALAARCHVDLPQAVISKMDTNRQRYPV  131 (170)
T ss_dssp             HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHSCC
T ss_pred             HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhccc
Confidence            3455678888888875     466667777777543


No 14 
>1xly_A SHE2P, SHE2, YKL130C; basic helical hairpin, five helix bundle, dimer, RNA- binding protein, RNA binding protein; 1.95A {Saccharomyces cerevisiae} SCOP: a.232.1.1
Probab=21.66  E-value=1.3e+02  Score=27.52  Aligned_cols=46  Identities=20%  Similarity=0.358  Sum_probs=27.0

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHH
Q 022548          195 LRVMQGVVNFFGRISILIDQNTQAFHLFMTALLQLFDRSGMLYGE---LARFVLRL  247 (295)
Q Consensus       195 Fq~IeSIV~AFG~fAqMLEST~~A~hsSF~AmlslaDr~G~L~g~---Larfvlrl  247 (295)
                      +++++-|+..|   +.-|.++.+++.-+|    .+.-|...||-|   |+||||||
T Consensus         9 ~~~l~e~~~~~---s~YiS~yi~~LNk~I----~~lRrvStLrfER~tLIKyVKKL   57 (234)
T 1xly_A            9 SELVEQILALL---SRYLSSYIHVLNKFI----SHLRRVATLRFERTTLIKFVKKL   57 (234)
T ss_dssp             HHHHHHHHHHH---HHHHHHHHHHHHHHH----HHHTTCGGGHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHH---HHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHH
Confidence            44555554444   446666666655443    334444455554   99999998


No 15 
>1t3j_A Mitofusin 1; coiled coil antiparallel, dimer, membrane protein; 2.50A {Mus musculus} SCOP: h.4.16.1
Probab=21.26  E-value=2.2e+02  Score=22.65  Aligned_cols=54  Identities=22%  Similarity=0.301  Sum_probs=26.5

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHHh
Q 022548          195 LRVMQGVVNFFGRISILIDQNTQAFHLFMTALLQ--------------LFDRSGMLYGELARFVLRLL  248 (295)
Q Consensus       195 Fq~IeSIV~AFG~fAqMLEST~~A~hsSF~Amls--------------laDr~G~L~g~LarfvlrlL  248 (295)
                      -|+-+-+..+|.++-+.+|.+..-+--=|..+-.              |-+++.+|..+|.+|.+..|
T Consensus        28 hQVQqELs~tfarLc~~Vd~t~~eL~~EI~~L~~eI~~LE~iqs~aK~LRnKA~~L~~eLe~F~~~yL   95 (96)
T 1t3j_A           28 HQVQQEMATTFARLCQQVDMTQKHLEEEIARLSKEIDQLEKMQNNSKLLRNKAVQLESELENFSKQFL   95 (96)
T ss_dssp             -------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhc
Confidence            3566777778888877777766555444433322              22224455556666655443


No 16 
>2d0t_A Indoleamine 2,3-dioxygenase; helix bundle, riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: HEM PIM NHE; 2.30A {Homo sapiens} SCOP: a.266.1.2 PDB: 2d0u_A*
Probab=21.16  E-value=75  Score=30.35  Aligned_cols=37  Identities=11%  Similarity=-0.076  Sum_probs=28.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCC
Q 022548          221 LFMTALLQLFDRSGMLYGELARFVLRLLGIKTKPKKV  257 (295)
Q Consensus       221 sSF~AmlslaDr~G~L~g~LarfvlrlLg~~tk~r~~  257 (295)
                      -.-.++.+++|+|..+|..=.++|.|.+++.+|-++.
T Consensus       330 ~L~ea~~~~~~~l~~fR~~Hi~~V~ryI~~~a~~~~~  366 (406)
T 2d0t_A          330 GLREAYDACVKALVSLRSYHLQIVTKYILIPASQQPK  366 (406)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHTC---
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccc
Confidence            4567889999999999999899999999876654433


No 17 
>3zbh_A ESXA; unknown function, type 7 secretion, ESAT6 family proteins, W protein ESS; 1.94A {Geobacillus thermodenitrificans}
Probab=20.53  E-value=2.3e+02  Score=19.99  Aligned_cols=31  Identities=13%  Similarity=0.158  Sum_probs=16.5

Q ss_pred             HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Q 022548          196 RVMQGVVNFFGRISILIDQNTQAFHLFMTAL  226 (295)
Q Consensus       196 q~IeSIV~AFG~fAqMLEST~~A~hsSF~Am  226 (295)
                      ..|+.+...|...+.-|+.....+...+..|
T Consensus        12 ~~l~~~A~~~~~~~~~i~~~l~~L~~~v~~L   42 (99)
T 3zbh_A           12 EELRGVARQYNVESSNVTELIARLDQMSHTL   42 (99)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3455555555555555555555555554444


Done!