Query 022552
Match_columns 295
No_of_seqs 141 out of 1386
Neff 6.5
Searched_HMMs 29240
Date Mon Mar 25 07:20:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022552.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022552hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2nyi_A Unknown protein; protei 99.8 7.9E-19 2.7E-23 153.7 15.5 156 100-284 4-162 (195)
2 1u8s_A Glycine cleavage system 99.8 3.6E-17 1.2E-21 142.1 18.8 155 101-284 6-165 (192)
3 3p96_A Phosphoserine phosphata 98.9 8.4E-08 2.9E-12 91.7 21.1 138 100-263 11-149 (415)
4 2f06_A Conserved hypothetical 98.5 7.3E-06 2.5E-10 67.2 15.8 111 102-262 7-118 (144)
5 1zpv_A ACT domain protein; str 98.2 1.2E-05 4E-10 60.5 10.0 65 101-172 5-69 (91)
6 2nyi_A Unknown protein; protei 98.2 2.2E-06 7.6E-11 74.3 6.3 73 97-173 89-163 (195)
7 1zpv_A ACT domain protein; str 98.1 2.6E-05 8.9E-10 58.6 9.9 47 216-262 5-51 (91)
8 2ko1_A CTR148A, GTP pyrophosph 98.1 2.2E-05 7.4E-10 58.3 9.0 63 216-282 5-67 (88)
9 1u8s_A Glycine cleavage system 98.0 2.3E-05 7.9E-10 67.3 9.7 65 216-285 6-70 (192)
10 2ko1_A CTR148A, GTP pyrophosph 97.8 0.00012 4.1E-09 54.2 9.1 64 101-171 5-68 (88)
11 2re1_A Aspartokinase, alpha an 97.6 0.0012 4.2E-08 55.4 13.4 111 99-248 23-138 (167)
12 2dtj_A Aspartokinase; protein- 97.5 0.0062 2.1E-07 51.6 16.4 111 99-248 13-130 (178)
13 3o1l_A Formyltetrahydrofolate 97.4 0.00067 2.3E-08 62.9 9.8 66 100-171 21-88 (302)
14 3obi_A Formyltetrahydrofolate 97.3 0.00098 3.3E-08 61.3 9.7 66 100-171 5-72 (288)
15 3n0v_A Formyltetrahydrofolate 97.3 0.0012 4E-08 60.8 9.8 64 101-171 8-73 (286)
16 3lou_A Formyltetrahydrofolate 97.3 0.001 3.6E-08 61.2 9.4 39 100-138 9-47 (292)
17 3lou_A Formyltetrahydrofolate 97.2 0.00046 1.6E-08 63.7 6.6 47 215-263 9-55 (292)
18 3n0v_A Formyltetrahydrofolate 97.2 0.00057 1.9E-08 62.8 6.9 47 215-263 7-53 (286)
19 2f1f_A Acetolactate synthase i 97.2 0.0011 3.8E-08 56.1 8.0 65 216-285 3-69 (164)
20 3nrb_A Formyltetrahydrofolate 97.1 0.0015 5.3E-08 60.0 9.2 39 100-138 6-44 (287)
21 2dt9_A Aspartokinase; protein- 97.1 0.017 5.8E-07 48.2 14.9 121 98-262 13-140 (167)
22 3o1l_A Formyltetrahydrofolate 97.1 0.00074 2.5E-08 62.6 6.3 49 213-263 19-67 (302)
23 3nrb_A Formyltetrahydrofolate 97.0 0.00067 2.3E-08 62.4 5.9 47 215-263 6-52 (287)
24 2pc6_A Probable acetolactate s 97.0 0.0024 8.1E-08 54.1 8.7 65 216-285 4-70 (165)
25 2jhe_A Transcription regulator 96.9 0.0033 1.1E-07 51.8 8.8 59 218-283 2-60 (190)
26 3obi_A Formyltetrahydrofolate 96.9 0.0055 1.9E-07 56.3 10.5 46 216-263 6-51 (288)
27 2f1f_A Acetolactate synthase i 96.8 0.0049 1.7E-07 52.1 8.8 63 102-172 4-68 (164)
28 3p96_A Phosphoserine phosphata 96.7 0.0019 6.4E-08 61.4 5.7 40 215-254 11-50 (415)
29 2pc6_A Probable acetolactate s 96.4 0.01 3.5E-07 50.2 8.2 63 102-172 5-69 (165)
30 3s1t_A Aspartokinase; ACT doma 96.4 0.12 4.1E-06 43.9 14.9 110 100-248 15-131 (181)
31 2fgc_A Acetolactate synthase, 96.3 0.01 3.6E-07 51.4 7.5 64 216-284 29-94 (193)
32 2jhe_A Transcription regulator 96.1 0.023 8E-07 46.6 8.9 59 103-171 2-60 (190)
33 1y7p_A Hypothetical protein AF 95.9 0.013 4.3E-07 51.8 6.4 38 216-253 4-41 (223)
34 4go7_X Aspartokinase; transfer 95.9 0.043 1.5E-06 47.7 9.7 155 86-289 21-180 (200)
35 2fgc_A Acetolactate synthase, 95.4 0.038 1.3E-06 47.8 7.3 63 101-171 29-93 (193)
36 3ab4_A Aspartokinase; aspartat 95.1 0.16 5.6E-06 48.5 11.4 110 99-247 262-378 (421)
37 1y7p_A Hypothetical protein AF 95.0 0.044 1.5E-06 48.3 6.5 38 101-138 4-41 (223)
38 2f06_A Conserved hypothetical 94.7 0.091 3.1E-06 42.3 7.5 36 216-251 6-41 (144)
39 1sc6_A PGDH, D-3-phosphoglycer 94.4 0.074 2.5E-06 50.9 7.2 48 215-262 330-377 (404)
40 1ygy_A PGDH, D-3-phosphoglycer 94.0 0.33 1.1E-05 47.8 11.0 62 215-279 453-516 (529)
41 2qmx_A Prephenate dehydratase; 93.5 0.23 7.8E-06 45.4 8.3 54 215-268 199-253 (283)
42 3mwb_A Prephenate dehydratase; 93.5 0.26 8.9E-06 45.6 8.7 67 215-282 200-268 (313)
43 2qmw_A PDT, prephenate dehydra 93.1 0.35 1.2E-05 43.7 8.8 66 215-282 185-254 (267)
44 3luy_A Probable chorismate mut 92.7 0.77 2.6E-05 42.7 10.7 55 215-269 205-262 (329)
45 3c1m_A Probable aspartokinase; 92.3 0.73 2.5E-05 44.7 10.5 117 99-247 316-438 (473)
46 1sc6_A PGDH, D-3-phosphoglycer 92.2 0.51 1.7E-05 45.0 9.0 48 100-147 330-377 (404)
47 3l76_A Aspartokinase; alloster 91.9 1 3.4E-05 45.2 11.2 141 99-289 442-592 (600)
48 3l76_A Aspartokinase; alloster 91.8 8.1 0.00028 38.6 17.6 123 99-250 353-479 (600)
49 3tvi_A Aspartokinase; structur 89.5 1.7 5.7E-05 42.0 9.9 107 100-248 297-409 (446)
50 3k5p_A D-3-phosphoglycerate de 89.1 1.4 4.7E-05 42.3 8.9 76 57-141 308-383 (416)
51 1ygy_A PGDH, D-3-phosphoglycer 87.6 2.3 7.8E-05 41.8 9.6 49 99-147 452-502 (529)
52 1phz_A Protein (phenylalanine 86.7 1 3.5E-05 43.4 6.3 69 214-284 32-101 (429)
53 3k5p_A D-3-phosphoglycerate de 86.4 1.8 6.3E-05 41.4 8.0 48 215-262 342-389 (416)
54 3mtj_A Homoserine dehydrogenas 86.1 0.72 2.4E-05 44.6 5.0 35 215-249 358-392 (444)
55 2qmx_A Prephenate dehydratase; 84.4 3.9 0.00013 37.1 8.8 64 101-171 200-264 (283)
56 2re1_A Aspartokinase, alpha an 83.9 0.8 2.7E-05 37.9 3.6 48 215-262 24-73 (167)
57 2dt9_A Aspartokinase; protein- 83.5 0.95 3.3E-05 37.3 4.0 50 215-264 15-68 (167)
58 2dtj_A Aspartokinase; protein- 82.5 2.7 9.3E-05 35.0 6.5 38 215-252 14-52 (178)
59 2cdq_A Aspartokinase; aspartat 81.1 4.5 0.00016 39.7 8.4 120 100-262 340-466 (510)
60 3luy_A Probable chorismate mut 79.9 18 0.00063 33.4 11.7 53 101-155 206-261 (329)
61 3mwb_A Prephenate dehydratase; 79.7 6.7 0.00023 36.1 8.6 53 100-154 200-254 (313)
62 3mah_A Aspartokinase; aspartat 76.0 2.4 8.3E-05 34.5 4.0 99 100-248 17-121 (157)
63 3s1t_A Aspartokinase; ACT doma 73.9 4.3 0.00015 34.0 5.1 50 215-264 15-68 (181)
64 4go7_X Aspartokinase; transfer 73.3 2.8 9.7E-05 36.1 3.9 49 215-263 34-86 (200)
65 2qmw_A PDT, prephenate dehydra 72.9 16 0.00056 32.7 9.0 50 100-149 185-238 (267)
66 3mtj_A Homoserine dehydrogenas 64.6 16 0.00053 35.2 7.5 50 100-149 358-409 (444)
67 3ab4_A Aspartokinase; aspartat 56.3 25 0.00086 33.1 7.2 49 215-263 263-315 (421)
68 1phz_A Protein (phenylalanine 47.8 31 0.0011 33.0 6.3 51 99-149 32-83 (429)
69 3mah_A Aspartokinase; aspartat 44.3 15 0.00053 29.5 3.2 34 215-248 17-53 (157)
70 4esb_A Transcriptional regulat 37.0 35 0.0012 26.1 4.0 66 226-292 41-109 (115)
71 1rwu_A Hypothetical UPF0250 pr 32.2 1.7E+02 0.0058 22.4 8.6 64 99-170 34-100 (109)
72 3c1m_A Probable aspartokinase; 31.2 45 0.0015 32.0 4.6 48 215-264 317-367 (473)
73 1tdj_A Biosynthetic threonine 31.0 2E+02 0.0068 28.0 9.2 134 101-255 338-471 (514)
74 2j0w_A Lysine-sensitive aspart 28.3 53 0.0018 31.3 4.5 108 99-246 306-419 (449)
75 3ced_A Methionine import ATP-b 28.1 1.8E+02 0.0061 21.4 8.6 54 226-282 33-86 (98)
76 1zhv_A Hypothetical protein AT 27.5 57 0.002 26.0 3.9 31 216-246 62-95 (134)
77 3g12_A Putative lactoylglutath 27.2 1.8E+02 0.0061 21.5 6.7 49 100-156 66-115 (128)
78 2cdq_A Aspartokinase; aspartat 26.4 86 0.0029 30.5 5.7 34 215-248 340-376 (510)
79 1ib8_A Conserved protein SP14. 25.7 2.7E+02 0.0092 22.6 9.5 56 114-174 14-69 (164)
80 3tvi_A Aspartokinase; structur 25.1 56 0.0019 31.3 4.0 46 215-264 297-345 (446)
81 2qsw_A Methionine import ATP-b 23.3 2.2E+02 0.0075 20.7 7.3 41 226-267 36-76 (100)
82 2qrr_A Methionine import ATP-b 22.6 2.3E+02 0.0078 20.7 6.5 40 227-267 37-76 (101)
83 1zvp_A Hypothetical protein VC 21.8 1.4E+02 0.0047 23.7 5.1 32 216-247 71-105 (133)
84 3dhx_A Methionine import ATP-b 21.3 2.5E+02 0.0087 20.7 6.9 50 114-170 37-86 (106)
85 3hhh_A Transcriptional regulat 20.1 67 0.0023 24.6 2.8 64 226-290 45-111 (116)
No 1
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=99.80 E-value=7.9e-19 Score=153.65 Aligned_cols=156 Identities=14% Similarity=0.183 Sum_probs=113.9
Q ss_pred CeEEEEEEeCCCccHHHHHHHHHHHCCceEEEEEEEEcCCeEEEEEEEeecCCCCCCCChHHHHHHHHHHHHhhcccCCC
Q 022552 100 DATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFITRLDTGRKVEDPDLLERIRLTIINNLLKYHPE 179 (295)
Q Consensus 100 ~~t~V~V~~~DrpGLl~~I~~vL~~~glnI~~A~I~T~~~~~~D~F~V~~~~~g~~~~d~~~le~L~~~L~~~L~~~~~~ 179 (295)
..++|+|+|+|||||++.|+++|+++|+||++|++++..+++.-.|.+... +. ....+++.|+..|...+.+...
T Consensus 4 ~~~~ltv~~~DrpGiva~vs~~La~~g~NI~da~q~~~~~~f~m~~~v~~~--~~--~~~~~~~~l~~~L~~~~~~~~~- 78 (195)
T 2nyi_A 4 QSFVVSVAGSDRVGIVHDFSWALKNISANVESSRMACLGGDFAMIVLVSLN--AK--DGKLIQSALESALPGFQISTRR- 78 (195)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEES--SS--SSHHHHHHHHHHSTTCEEEEEE-
T ss_pred eEEEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEeEEECCeEEEEEEEEec--Cc--cchhHHHHHHHHHHHHHHhcCC-
Confidence 357899999999999999999999999999999999999988557777653 21 2234567777776654322100
Q ss_pred chhHhhhccccCccCCcccccccccceEEecCCCCceEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEecC--Ceee
Q 022552 180 SSEQLAMGEAFGIKAPEKKLDVDIATHIHVKEDGPKRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEG--LVAK 257 (295)
Q Consensus 180 ~~~~La~~~~~~~~~~~r~~~~~~~~~V~i~~~~~~~t~IeV~a~DRPGLL~dIt~~L~~~gI~I~~A~I~T~g--~~a~ 257 (295)
. .. .+ . .+ .......++|+|.|+|||||+++|+++|+++|+||..++..|.+ +++.
T Consensus 79 -~-----------~~-~~--~---~~----~~~~~~~~iltv~g~DrpGiva~Vt~~La~~g~nI~~~~~~t~~~~~~~~ 136 (195)
T 2nyi_A 79 -A-----------SS-VA--E---RH----VSPDTREYELYVEGPDSEGIVEAVTAVLAKKGANIVELETETLPAPFAGF 136 (195)
T ss_dssp -C-----------CC-C-------------CCTTEEEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEEECSSTTC
T ss_pred -e-----------EE-EE--e---CC----cCCCCcEEEEEEEeCCCcCHHHHHHHHHHHcCCCEEEceeeecccccCCC
Confidence 0 00 01 0 01 12223589999999999999999999999999999999999998 7889
Q ss_pred eEEEEEe-CCCCCChHHHHHHHHHHHHH
Q 022552 258 DKFHVSY-GGAALNSSLSQVLVNCLRYY 284 (295)
Q Consensus 258 D~F~V~~-~G~~l~~~~~~~L~~~L~~~ 284 (295)
+.|+++- .+.+ .+.. ++|++.|...
T Consensus 137 ~~F~m~~~~~~~-~~~~-~~l~~~l~~~ 162 (195)
T 2nyi_A 137 TLFRMGSRVAFP-FPLY-QEVVTALSRV 162 (195)
T ss_dssp EEEEEEEEEEEE-GGGH-HHHHHHHHHH
T ss_pred CeEEEEEEEEcC-CCcc-HHHHHHHHHH
Confidence 9999975 3322 1224 6677766644
No 2
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=99.76 E-value=3.6e-17 Score=142.12 Aligned_cols=155 Identities=13% Similarity=0.156 Sum_probs=110.1
Q ss_pred eEEEEEEeCCCccHHHHHHHHHHHCCceEEEEEEEEcCCeEEEEEEEeecCCCCCCCChHHHHHHHHHHHHhhcccCCCc
Q 022552 101 ATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFITRLDTGRKVEDPDLLERIRLTIINNLLKYHPES 180 (295)
Q Consensus 101 ~t~V~V~~~DrpGLl~~I~~vL~~~glnI~~A~I~T~~~~~~D~F~V~~~~~g~~~~d~~~le~L~~~L~~~L~~~~~~~ 180 (295)
..+|+|+|+||||++++|+++|+++|+||.++++++..+++.-.|.+..+ ...++.|+..|...+.....
T Consensus 6 ~~~itv~~~DrpGiva~vt~~La~~g~NI~d~~~~~~~~~f~~~~~v~~~--------~~~~~~l~~~L~~~~~~~~~-- 75 (192)
T 1u8s_A 6 HLVITAVGTDRPGICNEVVRLVTQAGCNIIDSRIAMFGKEFTLLMLISGS--------PSNITRVETTLPLLGQQHDL-- 75 (192)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEEC--------HHHHHHHHHHHHHHHHHHTC--
T ss_pred EEEEEEEcCCCCcHHHHHHHHHHHCCCCEEeeeeeecCCceEEEEEEecC--------CCCHHHHHHHHHHHHHhcCC--
Confidence 57899999999999999999999999999999999998888667777542 24678888888775432111
Q ss_pred hhHhhhccccCccCCcccccccccceEEecCCCCceEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEecCC----ee
Q 022552 181 SEQLAMGEAFGIKAPEKKLDVDIATHIHVKEDGPKRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGL----VA 256 (295)
Q Consensus 181 ~~~La~~~~~~~~~~~r~~~~~~~~~V~i~~~~~~~t~IeV~a~DRPGLL~dIt~~L~~~gI~I~~A~I~T~g~----~a 256 (295)
...+ + +. . .++ .......++|+|.|+||||+|++|+++|+++|+||.+++..|.++ +.
T Consensus 76 ~~~~-----~--~~-~------~~~----~~~~~~~~~l~v~~~D~~Gil~~v~~~l~~~~~nI~~~~~~t~~~~~~~~~ 137 (192)
T 1u8s_A 76 ITMM-----K--RT-S------PHD----HQTHAYTVEVYVESDDKLGLTEKFTQFFAQRQIGMASLSAQTISKDKLHSE 137 (192)
T ss_dssp EEEE-----E--EE-C------CCC----CCCCSEEEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEEEC-------
T ss_pred EEEE-----E--eC-C------CCC----CccCCceEEEEEEeCCCccHHHHHHHHHHHcCCcHHHhhhhcccCCccCCC
Confidence 0000 0 00 0 001 112235799999999999999999999999999999999999985 68
Q ss_pred eeEEEEEe-CCCCCChHHHHHHHHHHHHH
Q 022552 257 KDKFHVSY-GGAALNSSLSQVLVNCLRYY 284 (295)
Q Consensus 257 ~D~F~V~~-~G~~l~~~~~~~L~~~L~~~ 284 (295)
.+.|+++- .+.+ .+...++|++.|...
T Consensus 138 ~~~F~~~~~~~~~-~~~~~~~l~~~l~~~ 165 (192)
T 1u8s_A 138 QNQFHIAISARVD-SGCNLMQLQEEFDAL 165 (192)
T ss_dssp -CEEEEEEEEEEC-TTSCHHHHHHHHHHH
T ss_pred CCEEEEEEEEeCC-CCCCHHHHHHHHHHH
Confidence 99999974 2222 111445666666543
No 3
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=98.95 E-value=8.4e-08 Score=91.72 Aligned_cols=138 Identities=9% Similarity=0.054 Sum_probs=92.3
Q ss_pred CeEEEEEEeCCCccHHHHHHHHHHHCCceEEEEEEEEcCCeEEEEEEEeecCCCCCCCChHHHHHHHHHHHHhhcccCCC
Q 022552 100 DATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFITRLDTGRKVEDPDLLERIRLTIINNLLKYHPE 179 (295)
Q Consensus 100 ~~t~V~V~~~DrpGLl~~I~~vL~~~glnI~~A~I~T~~~~~~D~F~V~~~~~g~~~~d~~~le~L~~~L~~~L~~~~~~ 179 (295)
...+|+|.|+||||+.+.|+++|+++|+||.+.+.+..++.+.-...+.-+ .+ ....+.|+..|...-.. .+
T Consensus 11 ~~~~lt~~g~Dr~Giv~~vs~~l~~~~~nI~d~~q~~~~~~f~~~~~~~~~-~~-----~~~~~~l~~~l~~~~~~--~~ 82 (415)
T 3p96_A 11 VSVLITVTGVDQPGVTATLFEVLSRHGVELLNVEQVVIRHRLTLGVLVCCP-AD-----VADGPALRHDVEAAIRK--VG 82 (415)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHTTTTCEEEEEEEEEETTEEEEEEEEEEC-HH-----HHTSHHHHHHHHHHHHH--TT
T ss_pred CeEEEEEEcCCCCCHHHHHHHHHHHCCCCEEEeeeEEECCEeEEEEEEEec-CC-----cCCHHHHHHHHHHHHHH--cC
Confidence 457899999999999999999999999999999999988876433333221 11 01236677777653221 11
Q ss_pred chhHhhhccccCccCCcccccccccceEEecCCCCceEEEEEEeCC-CcchHHHHHHHHHhCCceEEEEEEEecCCeeee
Q 022552 180 SSEQLAMGEAFGIKAPEKKLDVDIATHIHVKEDGPKRSLLYIETAD-RPGLLVEIMKIIADVNVDVESAEIDTEGLVAKD 258 (295)
Q Consensus 180 ~~~~La~~~~~~~~~~~r~~~~~~~~~V~i~~~~~~~t~IeV~a~D-RPGLL~dIt~~L~~~gI~I~~A~I~T~g~~a~D 258 (295)
+...+ .... ..+ ......++++++.+.| +||++.+|+.+|+++|+||...+.-+......-
T Consensus 83 ~~~~~--------~~~~------~~~----~~~~~~~~~~~llg~~~~~~~~~~i~~~l~~~~~Ni~~l~~~~~~~~~~~ 144 (415)
T 3p96_A 83 LDVSI--------ERSD------DVP----IIREPSTHTIFVLGRPITAAAFGAVAREVAALGVNIDLIRGVSDYPVIGL 144 (415)
T ss_dssp CEEEE--------EECS------SSC----SSCCCCSEEEEEEESSCCHHHHHHHHHHHHHTTCEEEEEEEEESSSSEEE
T ss_pred eEEEE--------EECC------ccc----ccCCCCcEEEEEEeCCCCHHHHHHHHHHHHHcCCCccceeeccCCCceEE
Confidence 11000 0000 000 0122358999999999 999999999999999999999888774333333
Q ss_pred EEEEE
Q 022552 259 KFHVS 263 (295)
Q Consensus 259 ~F~V~ 263 (295)
.|++.
T Consensus 145 ~~~v~ 149 (415)
T 3p96_A 145 ELRVS 149 (415)
T ss_dssp EEEEE
T ss_pred EEEee
Confidence 36663
No 4
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=98.47 E-value=7.3e-06 Score=67.17 Aligned_cols=111 Identities=12% Similarity=0.173 Sum_probs=75.2
Q ss_pred EEEEEEeCCCccHHHHHHHHHHHCCceEEEEEEEEcCC-eEEEEEEEeecCCCCCCCChHHHHHHHHHHHHhhcccCCCc
Q 022552 102 TIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGS-VKQTKFFITRLDTGRKVEDPDLLERIRLTIINNLLKYHPES 180 (295)
Q Consensus 102 t~V~V~~~DrpGLl~~I~~vL~~~glnI~~A~I~T~~~-~~~D~F~V~~~~~g~~~~d~~~le~L~~~L~~~L~~~~~~~ 180 (295)
..++|..+|+||.++++++.|++.|+||..-.+....+ ++ -.|.+. ++ ++.++.|++ . + .
T Consensus 7 ~~i~v~v~d~~G~l~~i~~~la~~~inI~~i~~~~~~~~~~-~~~~~~---------d~---~~a~~~L~~-~-G--~-- 67 (144)
T 2f06_A 7 KQLSIFLENKSGRLTEVTEVLAKENINLSALCIAENADFGI-LRGIVS---------DP---DKAYKALKD-N-H--F-- 67 (144)
T ss_dssp EEEEEEECSSSSHHHHHHHHHHHTTCCEEEEEEEECSSCEE-EEEEES---------CH---HHHHHHHHH-T-T--C--
T ss_pred EEEEEEecCCCcHHHHHHHHHHHCCCCEEEEEEEecCCCCE-EEEEeC---------CH---HHHHHHHHH-c-C--C--
Confidence 57889999999999999999999999999887765544 32 123321 12 223333332 1 1 0
Q ss_pred hhHhhhccccCccCCcccccccccceEEecCCCCceEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEecCCeeeeEE
Q 022552 181 SEQLAMGEAFGIKAPEKKLDVDIATHIHVKEDGPKRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKF 260 (295)
Q Consensus 181 ~~~La~~~~~~~~~~~r~~~~~~~~~V~i~~~~~~~t~IeV~a~DRPGLL~dIt~~L~~~gI~I~~A~I~T~g~~a~D~F 260 (295)
. + ....++-+..+|+||.+++|+++|++.||||.+......+.+..-+|
T Consensus 68 ---------------------~----v------~~~svv~v~~~d~pGvla~i~~~L~~~~InI~~~~~~~~~~~~~~~i 116 (144)
T 2f06_A 68 ---------------------A----V------NITDVVGISCPNVPGALAKVLGFLSAEGVFIEYMYSFANNNVANVVI 116 (144)
T ss_dssp ---------------------C----E------EEEEEEEEEEESSTTHHHHHHHHHHHTTCCEEEEEEEEETTEEEEEE
T ss_pred ---------------------e----E------eeeeEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEEEccCCcEEEEE
Confidence 0 0 01246777889999999999999999999998766653344444444
Q ss_pred EE
Q 022552 261 HV 262 (295)
Q Consensus 261 ~V 262 (295)
.+
T Consensus 117 ~~ 118 (144)
T 2f06_A 117 RP 118 (144)
T ss_dssp EE
T ss_pred Ee
Confidence 33
No 5
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7
Probab=98.19 E-value=1.2e-05 Score=60.54 Aligned_cols=65 Identities=11% Similarity=0.111 Sum_probs=50.6
Q ss_pred eEEEEEEeCCCccHHHHHHHHHHHCCceEEEEEEEEcCCeEEEEEEEeecCCCCCCCChHHHHHHHHHHHHh
Q 022552 101 ATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFITRLDTGRKVEDPDLLERIRLTIINN 172 (295)
Q Consensus 101 ~t~V~V~~~DrpGLl~~I~~vL~~~glnI~~A~I~T~~~~~~D~F~V~~~~~g~~~~d~~~le~L~~~L~~~ 172 (295)
...|+|.++||||++++|+++|+++|+||.+....+..+.+.-.+.+.-+ +. ..++.|...|.+.
T Consensus 5 ~~~l~v~~~DrpGila~vt~~la~~~~NI~~i~~~~~~~~~~~~i~v~~~--~~-----~~l~~l~~~L~~~ 69 (91)
T 1zpv_A 5 KAIITVVGKDKSGIVAGVSGKIAELGLNIDDISQTVLDEYFTMMAVVSSD--EK-----QDFTYLRNEFEAF 69 (91)
T ss_dssp EEEEEEEESCCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEES--SC-----CCHHHHHHHHHHH
T ss_pred eEEEEEEECCCCCHHHHHHHHHHHcCCCEEEEEeEEEcCEEEEEEEEEeC--CC-----CCHHHHHHHHHHH
Confidence 46899999999999999999999999999999999887655445555432 21 3457777777763
No 6
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=98.17 E-value=2.2e-06 Score=74.30 Aligned_cols=73 Identities=11% Similarity=0.002 Sum_probs=53.6
Q ss_pred CCCCeEEEEEEeCCCccHHHHHHHHHHHCCceEEEEEEEEcC--CeEEEEEEEeecCCCCCCCChHHHHHHHHHHHHhh
Q 022552 97 SNSDATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEG--SVKQTKFFITRLDTGRKVEDPDLLERIRLTIINNL 173 (295)
Q Consensus 97 ~~~~~t~V~V~~~DrpGLl~~I~~vL~~~glnI~~A~I~T~~--~~~~D~F~V~~~~~g~~~~d~~~le~L~~~L~~~L 173 (295)
.....++|+|.|+|||||++.|+++|+++|+||.+++.++.+ +...+.|++... -+.+ +... +.|+..|....
T Consensus 89 ~~~~~~iltv~g~DrpGiva~Vt~~La~~g~nI~~~~~~t~~~~~~~~~~F~m~~~-~~~~--~~~~-~~l~~~l~~~a 163 (195)
T 2nyi_A 89 PDTREYELYVEGPDSEGIVEAVTAVLAKKGANIVELETETLPAPFAGFTLFRMGSR-VAFP--FPLY-QEVVTALSRVE 163 (195)
T ss_dssp TTEEEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEEECSSTTCEEEEEEEE-EEEE--GGGH-HHHHHHHHHHH
T ss_pred CCCcEEEEEEEeCCCcCHHHHHHHHHHHcCCCEEEceeeecccccCCCCeEEEEEE-EEcC--CCcc-HHHHHHHHHHH
Confidence 344567999999999999999999999999999999999987 323345555442 1111 2234 77888877644
No 7
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7
Probab=98.08 E-value=2.6e-05 Score=58.58 Aligned_cols=47 Identities=11% Similarity=0.208 Sum_probs=39.5
Q ss_pred eEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEecCCeeeeEEEE
Q 022552 216 RSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHV 262 (295)
Q Consensus 216 ~t~IeV~a~DRPGLL~dIt~~L~~~gI~I~~A~I~T~g~~a~D~F~V 262 (295)
.+.|.|.++||||+|++|+.+|+++|+||.+....+.++...-.+.+
T Consensus 5 ~~~l~v~~~DrpGila~vt~~la~~~~NI~~i~~~~~~~~~~~~i~v 51 (91)
T 1zpv_A 5 KAIITVVGKDKSGIVAGVSGKIAELGLNIDDISQTVLDEYFTMMAVV 51 (91)
T ss_dssp EEEEEEEESCCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEE
T ss_pred eEEEEEEECCCCCHHHHHHHHHHHcCCCEEEEEeEEEcCEEEEEEEE
Confidence 57899999999999999999999999999999998876443333334
No 8
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=98.06 E-value=2.2e-05 Score=58.31 Aligned_cols=63 Identities=13% Similarity=0.214 Sum_probs=47.5
Q ss_pred eEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEecCCeeeeEEEEEeCCCCCChHHHHHHHHHHH
Q 022552 216 RSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVSYGGAALNSSLSQVLVNCLR 282 (295)
Q Consensus 216 ~t~IeV~a~DRPGLL~dIt~~L~~~gI~I~~A~I~T~g~~a~D~F~V~~~G~~l~~~~~~~L~~~L~ 282 (295)
.+.|.|.+.||||+|++|+++|++.|+||.++...+.++.+...|.+.-.+ ...++++.+.|.
T Consensus 5 ~~~l~v~~~Dr~G~L~~I~~~la~~~inI~~i~~~~~~~~~~~~i~v~~~~----~~~l~~l~~~L~ 67 (88)
T 2ko1_A 5 LAGIRIVGEDKNGMTNQITGVISKFDTNIRTIVLNAKDGIFTCNLMIFVKN----TDKLTTLMDKLR 67 (88)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHTTSSSCEEEEEEEECSSEEEEEEEEEESS----HHHHHHHHHHHT
T ss_pred EEEEEEEEECCCcHHHHHHHHHHHCCCCeEEEEEEEcCCEEEEEEEEEECC----HHHHHHHHHHHh
Confidence 578999999999999999999999999999999988765555555553221 234555555554
No 9
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=98.02 E-value=2.3e-05 Score=67.29 Aligned_cols=65 Identities=15% Similarity=0.174 Sum_probs=50.4
Q ss_pred eEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEecCCeeeeEEEEEeCCCCCChHHHHHHHHHHHHHc
Q 022552 216 RSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVSYGGAALNSSLSQVLVNCLRYYL 285 (295)
Q Consensus 216 ~t~IeV~a~DRPGLL~dIt~~L~~~gI~I~~A~I~T~g~~a~D~F~V~~~G~~l~~~~~~~L~~~L~~~L 285 (295)
.++|.|.|+|||||+++|+.+|+++|+||..+++.+.++.-.-.|.+... ....++|++.|...+
T Consensus 6 ~~~itv~~~DrpGiva~vt~~La~~g~NI~d~~~~~~~~~f~~~~~v~~~-----~~~~~~l~~~L~~~~ 70 (192)
T 1u8s_A 6 HLVITAVGTDRPGICNEVVRLVTQAGCNIIDSRIAMFGKEFTLLMLISGS-----PSNITRVETTLPLLG 70 (192)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEEC-----HHHHHHHHHHHHHHH
T ss_pred EEEEEEEcCCCCcHHHHHHHHHHHCCCCEEeeeeeecCCceEEEEEEecC-----CCCHHHHHHHHHHHH
Confidence 58899999999999999999999999999999999866554445556432 134566777766543
No 10
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=97.80 E-value=0.00012 Score=54.19 Aligned_cols=64 Identities=9% Similarity=0.119 Sum_probs=47.2
Q ss_pred eEEEEEEeCCCccHHHHHHHHHHHCCceEEEEEEEEcCCeEEEEEEEeecCCCCCCCChHHHHHHHHHHHH
Q 022552 101 ATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFITRLDTGRKVEDPDLLERIRLTIIN 171 (295)
Q Consensus 101 ~t~V~V~~~DrpGLl~~I~~vL~~~glnI~~A~I~T~~~~~~D~F~V~~~~~g~~~~d~~~le~L~~~L~~ 171 (295)
.+.|.|.++||||++++|+++|++.|+||.+..+.+.++.+...|.+.-. +.+.++.+...|++
T Consensus 5 ~~~l~v~~~Dr~G~L~~I~~~la~~~inI~~i~~~~~~~~~~~~i~v~~~-------~~~~l~~l~~~L~~ 68 (88)
T 2ko1_A 5 LAGIRIVGEDKNGMTNQITGVISKFDTNIRTIVLNAKDGIFTCNLMIFVK-------NTDKLTTLMDKLRK 68 (88)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHTTSSSCEEEEEEEECSSEEEEEEEEEES-------SHHHHHHHHHHHTT
T ss_pred EEEEEEEEECCCcHHHHHHHHHHHCCCCeEEEEEEEcCCEEEEEEEEEEC-------CHHHHHHHHHHHhc
Confidence 35788999999999999999999999999999998876633344544331 23555555555543
No 11
>2re1_A Aspartokinase, alpha and beta subunits; structural genomics, protein structure initiative, midwest center for structural genomics; 2.75A {Neisseria meningitidis MC58}
Probab=97.60 E-value=0.0012 Score=55.38 Aligned_cols=111 Identities=11% Similarity=0.135 Sum_probs=72.5
Q ss_pred CCeEEEEEE-eCCCccHHHHHHHHHHHCCceEEEEEEEEcCCeE-EEEEEEeecCCCCCCCChHHHHHHHHHHHHhhccc
Q 022552 99 SDATIVQLS-FGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVK-QTKFFITRLDTGRKVEDPDLLERIRLTIINNLLKY 176 (295)
Q Consensus 99 ~~~t~V~V~-~~DrpGLl~~I~~vL~~~glnI~~A~I~T~~~~~-~D~F~V~~~~~g~~~~d~~~le~L~~~L~~~L~~~ 176 (295)
.+.+.|+|. .+|+||.++++.+.|+++|+||..-......++. .-.|.|... ..++....|++ +..
T Consensus 23 ~~~~~i~v~~~~~~~G~~~~if~~La~~~Invd~i~~s~~~~g~~~isf~v~~~----------~~~~a~~~l~~-~~~- 90 (167)
T 2re1_A 23 KNQARINVRGVPDKPGVAYQILGAVADANIEVDMIIQNVGSEGTTDFSFTVPRG----------DYKQTLEILSE-RQD- 90 (167)
T ss_dssp CCCEEEEEEEEECCTTHHHHHHHHHHTTTCCCCCEEEC----CEEEEEEEECGG----------GHHHHHHHHHH-SST-
T ss_pred CCEEEEEEecCCCCcCHHHHHHHHHHHcCCeEEEEEcCCCCCCeeEEEEEEech----------HHHHHHHHHHH-HHH-
Confidence 355788888 5999999999999999999999876554333332 234655431 12333344444 211
Q ss_pred CCCchhHhhhccccCccCCcccccccccceEEecCCCCceEEEEEEeCC---CcchHHHHHHHHHhCCceEEEEE
Q 022552 177 HPESSEQLAMGEAFGIKAPEKKLDVDIATHIHVKEDGPKRSLLYIETAD---RPGLLVEIMKIIADVNVDVESAE 248 (295)
Q Consensus 177 ~~~~~~~La~~~~~~~~~~~r~~~~~~~~~V~i~~~~~~~t~IeV~a~D---RPGLL~dIt~~L~~~gI~I~~A~ 248 (295)
+. . + ..|.+. .+.+.+.|.+.+ +||+++++.++|++.||||....
T Consensus 91 ~l--~-------------------~---~~i~~~---~~~a~vsvvG~~m~~~~Gv~a~i~~aL~~~~InI~~is 138 (167)
T 2re1_A 91 SI--G-------------------A---ASIDGD---DTVCKVSAVGLGMRSHVGVAAKIFRTLAEEGINIQMIS 138 (167)
T ss_dssp TT--T-------------------C---SEEEEE---SSEEEEEEECSSCTTCCCHHHHHHHHHHHTTCCCCEEE
T ss_pred Hc--C-------------------C---ceEEec---CCEEEEEEECCCcCCCcCHHHHHHHHHHHCCCcEEEEE
Confidence 00 0 0 012222 256888898886 99999999999999999999843
No 12
>2dtj_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; HET: CIT; 1.58A {Corynebacterium glutamicum} PDB: 3aaw_B* 3ab2_B 3ab4_B*
Probab=97.48 E-value=0.0062 Score=51.65 Aligned_cols=111 Identities=20% Similarity=0.255 Sum_probs=72.0
Q ss_pred CCeEEEEE-EeCCCccHHHHHHHHHHHCCceEEEEEEEEcC--C-eEEEEEEEeecCCCCCCCChHHHHHHHHHHHHhhc
Q 022552 99 SDATIVQL-SFGDRLGALIDTMNALKDLGLDVAKGTVNTEG--S-VKQTKFFITRLDTGRKVEDPDLLERIRLTIINNLL 174 (295)
Q Consensus 99 ~~~t~V~V-~~~DrpGLl~~I~~vL~~~glnI~~A~I~T~~--~-~~~D~F~V~~~~~g~~~~d~~~le~L~~~L~~~L~ 174 (295)
.+.+.|+| ..+|+||.+++|...|++.|+||..-...+.. + ...-.|.+.. +..++....|++ +.
T Consensus 13 ~~~~~Itv~~~~~~~G~~a~if~~La~~~InId~i~~s~~~~~~~~~~isf~v~~----------~d~~~a~~~l~~-~~ 81 (178)
T 2dtj_A 13 KSEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVSSVEDGTTDITFTCPR----------SDGRRAMEILKK-LQ 81 (178)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCEEEECCCCTTTCEEEEEEEEEH----------HHHHHHHHHHHT-TT
T ss_pred CCEEEEEEecCCCCccHHHHHHHHHHHcCCCEEEEEcCCCCCCCCceEEEEEEcc----------ccHHHHHHHHHH-HH
Confidence 45677777 46999999999999999999999866554331 2 2221255543 222333444443 21
Q ss_pred ccCCCchhHhhhccccCccCCcccccccccceEEecCCCCceEEEEEEeC---CCcchHHHHHHHHHhCCceEEEEE
Q 022552 175 KYHPESSEQLAMGEAFGIKAPEKKLDVDIATHIHVKEDGPKRSLLYIETA---DRPGLLVEIMKIIADVNVDVESAE 248 (295)
Q Consensus 175 ~~~~~~~~~La~~~~~~~~~~~r~~~~~~~~~V~i~~~~~~~t~IeV~a~---DRPGLL~dIt~~L~~~gI~I~~A~ 248 (295)
. +. + + ..|.+. .+...|.|.|. ++||+++++.++|++.||||....
T Consensus 82 ~-~~------------~---------~---~~v~~~---~~~a~VsvVG~gm~~~~Gv~arif~aLa~~~InI~~is 130 (178)
T 2dtj_A 82 V-QG------------N---------W---TNVLYD---DQVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIELIS 130 (178)
T ss_dssp T-TT------------T---------C---SEEEEE---SCEEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCEEE
T ss_pred H-hc------------C---------C---CeEEEe---CCeEEEEEEcCCcccCccHHHHHHHHHHHCCCCEEEEE
Confidence 1 00 0 0 112222 24577777776 899999999999999999999853
No 13
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=97.40 E-value=0.00067 Score=62.86 Aligned_cols=66 Identities=14% Similarity=0.036 Sum_probs=47.2
Q ss_pred CeEEEEEEeCCCccHHHHHHHHHHHCCceEEEEEEEEcC--CeEEEEEEEeecCCCCCCCChHHHHHHHHHHHH
Q 022552 100 DATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEG--SVKQTKFFITRLDTGRKVEDPDLLERIRLTIIN 171 (295)
Q Consensus 100 ~~t~V~V~~~DrpGLl~~I~~vL~~~glnI~~A~I~T~~--~~~~D~F~V~~~~~g~~~~d~~~le~L~~~L~~ 171 (295)
...+++|.|+||||+.+.|++.|+++|+||.+.+.++.. +.+.-...+..+ .+ . ..++.|+..|..
T Consensus 21 ~~~iLtv~c~DrpGIVa~VS~~La~~g~NI~d~~q~~d~~~g~FfMr~~~~~~-~~-~----~~~~~L~~~l~~ 88 (302)
T 3o1l_A 21 RTFRLVIACPDRVGIVAKVSNFLASHNGWITEASHHSDNLSGWFFMRHEIRAD-TL-P----FDLDGFREAFTP 88 (302)
T ss_dssp CEEEEEEEEECCTTHHHHHHHHHHHTTCCEEEEEEEEETTTTEEEEEEEEEGG-GS-S----SCHHHHHHHHHH
T ss_pred ceEEEEEECCCCCCHHHHHHHHHHHCCCCEEEeeEEecCCCCeEEEEEEEecC-CC-C----CCHHHHHHHHHH
Confidence 456899999999999999999999999999999999763 444322223221 11 1 124667777665
No 14
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=97.30 E-value=0.00098 Score=61.32 Aligned_cols=66 Identities=14% Similarity=0.121 Sum_probs=46.7
Q ss_pred CeEEEEEEeCCCccHHHHHHHHHHHCCceEEEEEEEEcC--CeEEEEEEEeecCCCCCCCChHHHHHHHHHHHH
Q 022552 100 DATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEG--SVKQTKFFITRLDTGRKVEDPDLLERIRLTIIN 171 (295)
Q Consensus 100 ~~t~V~V~~~DrpGLl~~I~~vL~~~glnI~~A~I~T~~--~~~~D~F~V~~~~~g~~~~d~~~le~L~~~L~~ 171 (295)
...+++|.|+||||+.+.+++.|+++|+||.+.+.++.. +.+.-...+.-+ ++ .. .++.|+..|..
T Consensus 5 ~~~iLtv~g~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~-~~-~~----~~~~L~~~f~~ 72 (288)
T 3obi_A 5 HQYVLTLSCPDRAGIVSAVSTFLFENGQNILDAQQYNDTESGHFFMRVVFNAA-AK-VI----PLASLRTGFGV 72 (288)
T ss_dssp CEEEEEEEEECCTTHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEES-SC-CC----CHHHHHHHHHH
T ss_pred CeEEEEEECCCCCCHHHHHHHHHHHCCCcEEeeeeeecCCCCceEEEEEEEcC-CC-CC----CHHHHHHHHHH
Confidence 346899999999999999999999999999999998543 344322223222 11 11 24667777765
No 15
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=97.27 E-value=0.0012 Score=60.77 Aligned_cols=64 Identities=9% Similarity=-0.073 Sum_probs=46.3
Q ss_pred eEEEEEEeCCCccHHHHHHHHHHHCCceEEEEEEEEcC--CeEEEEEEEeecCCCCCCCChHHHHHHHHHHHH
Q 022552 101 ATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEG--SVKQTKFFITRLDTGRKVEDPDLLERIRLTIIN 171 (295)
Q Consensus 101 ~t~V~V~~~DrpGLl~~I~~vL~~~glnI~~A~I~T~~--~~~~D~F~V~~~~~g~~~~d~~~le~L~~~L~~ 171 (295)
..+|+|.|+||||+.+.+++.|+++|+||.+.+.++.. +.+.-...+..+ + . ...+.|+..|..
T Consensus 8 ~~vLtv~c~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~--~-~----~~~~~L~~~f~~ 73 (286)
T 3n0v_A 8 TWILTADCPSMLGTVDVVTRYLFEQRCYVTEHHSFDDRQSGRFFIRVEFRQP--D-D----FDEAGFRAGLAE 73 (286)
T ss_dssp CEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEECC--S-S----CCHHHHHHHHHH
T ss_pred cEEEEEEeCCCCCHHHHHHHHHHHCCCCeeeeeeeccCCCCeeEEEEEEecC--C-C----CCHHHHHHHHHH
Confidence 46899999999999999999999999999999999643 344322222221 1 1 224677777765
No 16
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=97.26 E-value=0.001 Score=61.24 Aligned_cols=39 Identities=18% Similarity=0.137 Sum_probs=35.6
Q ss_pred CeEEEEEEeCCCccHHHHHHHHHHHCCceEEEEEEEEcC
Q 022552 100 DATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEG 138 (295)
Q Consensus 100 ~~t~V~V~~~DrpGLl~~I~~vL~~~glnI~~A~I~T~~ 138 (295)
...+++|.|+||||+.+.|++.|+++|+||.+.+.++..
T Consensus 9 ~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~ 47 (292)
T 3lou_A 9 HQFVLTLSCPSAAGQVAAVVGLLDRHRCYVDELTVFDDD 47 (292)
T ss_dssp CEEEEEEEEESCSCHHHHHHHHHHHTTEEEEEEEEEEET
T ss_pred CcEEEEEEcCCCCCHHHHHHHHHHHCCCCEEeeEEEecC
Confidence 356899999999999999999999999999999999643
No 17
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=97.22 E-value=0.00046 Score=63.67 Aligned_cols=47 Identities=11% Similarity=0.229 Sum_probs=39.3
Q ss_pred ceEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEecCCeeeeEEEEE
Q 022552 215 KRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVS 263 (295)
Q Consensus 215 ~~t~IeV~a~DRPGLL~dIt~~L~~~gI~I~~A~I~T~g~~a~D~F~V~ 263 (295)
..++|+|.|+|||||+++|+++|+++|+||....-.+. ...+.|+++
T Consensus 9 ~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d--~~~g~Ffmr 55 (292)
T 3lou_A 9 HQFVLTLSCPSAAGQVAAVVGLLDRHRCYVDELTVFDD--DLSARFFVR 55 (292)
T ss_dssp CEEEEEEEEESCSCHHHHHHHHHHHTTEEEEEEEEEEE--TTTTEEEEE
T ss_pred CcEEEEEEcCCCCCHHHHHHHHHHHCCCCEEeeEEEec--CCCCceEEE
Confidence 45899999999999999999999999999999887753 334557665
No 18
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=97.19 E-value=0.00057 Score=62.84 Aligned_cols=47 Identities=9% Similarity=0.116 Sum_probs=39.4
Q ss_pred ceEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEecCCeeeeEEEEE
Q 022552 215 KRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVS 263 (295)
Q Consensus 215 ~~t~IeV~a~DRPGLL~dIt~~L~~~gI~I~~A~I~T~g~~a~D~F~V~ 263 (295)
..++|+|.|+|||||++.|+++|+++|+||....-.+. ...+.|+++
T Consensus 7 ~~~vLtv~c~DrpGIVa~Vs~~La~~g~NI~d~~q~~d--~~~g~Ffmr 53 (286)
T 3n0v_A 7 DTWILTADCPSMLGTVDVVTRYLFEQRCYVTEHHSFDD--RQSGRFFIR 53 (286)
T ss_dssp CCEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEE--TTTTEEEEE
T ss_pred CcEEEEEEeCCCCCHHHHHHHHHHHCCCCeeeeeeecc--CCCCeeEEE
Confidence 35899999999999999999999999999999887753 344567765
No 19
>2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6
Probab=97.17 E-value=0.0011 Score=56.10 Aligned_cols=65 Identities=12% Similarity=0.274 Sum_probs=50.3
Q ss_pred eEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEecC--CeeeeEEEEEeCCCCCChHHHHHHHHHHHHHc
Q 022552 216 RSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEG--LVAKDKFHVSYGGAALNSSLSQVLVNCLRYYL 285 (295)
Q Consensus 216 ~t~IeV~a~DRPGLL~dIt~~L~~~gI~I~~A~I~T~g--~~a~D~F~V~~~G~~l~~~~~~~L~~~L~~~L 285 (295)
.+.|.|.+.||||+|++|+.+|+++|+||.++.+.+.. +...=+|.+. |. +..+++|.+.|.+..
T Consensus 3 ~~~IsV~v~NrpGvLarIt~lfs~rg~NI~Sl~v~~t~d~~~sriti~V~--~d---~~~leqI~kqL~Kl~ 69 (164)
T 2f1f_A 3 RRILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLSRMTIQTV--GD---EKVLEQIEKQLHKLV 69 (164)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCCCSEEEEEECSCSSEEEEEEEEE--SC---HHHHHHHHHHHHHST
T ss_pred EEEEEEEEeCCCcHHHHHHHHHHHCCCCeeeceeeecCCCCEEEEEEEEe--cc---HHHHHHHHHHHcCCC
Confidence 36789999999999999999999999999999997533 4455556663 32 457788888877643
No 20
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=97.14 E-value=0.0015 Score=59.97 Aligned_cols=39 Identities=13% Similarity=0.221 Sum_probs=35.6
Q ss_pred CeEEEEEEeCCCccHHHHHHHHHHHCCceEEEEEEEEcC
Q 022552 100 DATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEG 138 (295)
Q Consensus 100 ~~t~V~V~~~DrpGLl~~I~~vL~~~glnI~~A~I~T~~ 138 (295)
...+++|.|+||||+.+.|++.|+++|+||.+.+.++..
T Consensus 6 ~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~ 44 (287)
T 3nrb_A 6 NQYVLSLACQDAPGIVSEVSTFLFNNGANIVEAEQFNDE 44 (287)
T ss_dssp TEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEET
T ss_pred CeEEEEEECCCCCCHHHHHHHHHHHCCCCEEeeeeeecC
Confidence 457899999999999999999999999999999998543
No 21
>2dt9_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; 2.15A {Thermus thermophilus} PDB: 2zho_A
Probab=97.12 E-value=0.017 Score=48.22 Aligned_cols=121 Identities=17% Similarity=0.221 Sum_probs=75.7
Q ss_pred CCCeEEEEEEe-CCCccHHHHHHHHHHHCCceEEEEEEEEcC--CeE-EEEEEEeecCCCCCCCChHHHHHHHHHHHHhh
Q 022552 98 NSDATIVQLSF-GDRLGALIDTMNALKDLGLDVAKGTVNTEG--SVK-QTKFFITRLDTGRKVEDPDLLERIRLTIINNL 173 (295)
Q Consensus 98 ~~~~t~V~V~~-~DrpGLl~~I~~vL~~~glnI~~A~I~T~~--~~~-~D~F~V~~~~~g~~~~d~~~le~L~~~L~~~L 173 (295)
..+.+.|+|.+ +|+||.++++.+.|++.|+||..-...... .+. .-.|.|... ..++....|.+..
T Consensus 13 ~~~~a~Itv~g~~~~~G~~a~if~~La~~~InVd~I~q~~~~~~~g~~~isf~V~~~----------d~~~a~~~L~~~~ 82 (167)
T 2dt9_A 13 DLDHAQIGLIGIPDQPGIAAKVFQALAERGIAVDMIIQGVPGHDPSRQQMAFTVKKD----------FAQEALEALEPVL 82 (167)
T ss_dssp ECSEEEEEEEEEECSTTHHHHHHHHHHHHTCCCSCEEBCCCCSCTTEEEEEEEEEGG----------GHHHHHHHHHHHH
T ss_pred eCCEEEEEEecCCCCCCHHHHHHHHHHHcCCcEEEEEcCCCCCCCCceEEEEEEehH----------HHHHHHHHHHHHH
Confidence 34567777776 899999999999999999999874433221 122 234666431 1122233333311
Q ss_pred cccCCCchhHhhhccccCccCCcccccccccceEEecCCCCceEEEEEEeCC---CcchHHHHHHHHHhCCceEEEEEEE
Q 022552 174 LKYHPESSEQLAMGEAFGIKAPEKKLDVDIATHIHVKEDGPKRSLLYIETAD---RPGLLVEIMKIIADVNVDVESAEID 250 (295)
Q Consensus 174 ~~~~~~~~~~La~~~~~~~~~~~r~~~~~~~~~V~i~~~~~~~t~IeV~a~D---RPGLL~dIt~~L~~~gI~I~~A~I~ 250 (295)
.. + + + .|.+. .+...+.|.|.+ +||.++++.++|++.||||....
T Consensus 83 ~~--------~------~---------~----~v~~~---~~~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~~is-- 130 (167)
T 2dt9_A 83 AE--------I------G---------G----EAILR---PDIAKVSIVGVGLASTPEVPAKMFQAVASTGANIEMIA-- 130 (167)
T ss_dssp HH--------H------C---------C----EEEEE---CSEEEEEEEESSGGGSTHHHHHHHHHHHHTTCCCCEEE--
T ss_pred HH--------h------C---------C----cEEEe---CCEEEEEEECCCcccCcCHHHHHHHHHHHCCCCEEEEE--
Confidence 10 0 0 0 12222 256888888876 99999999999999999995543
Q ss_pred ecCCeeeeEEEE
Q 022552 251 TEGLVAKDKFHV 262 (295)
Q Consensus 251 T~g~~a~D~F~V 262 (295)
|- +. .=.|.|
T Consensus 131 ~S-e~-~is~vv 140 (167)
T 2dt9_A 131 TS-EV-RISVII 140 (167)
T ss_dssp EC-SS-EEEEEE
T ss_pred cc-CC-EEEEEE
Confidence 32 32 444666
No 22
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=97.06 E-value=0.00074 Score=62.57 Aligned_cols=49 Identities=20% Similarity=0.279 Sum_probs=40.4
Q ss_pred CCceEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEecCCeeeeEEEEE
Q 022552 213 GPKRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVS 263 (295)
Q Consensus 213 ~~~~t~IeV~a~DRPGLL~dIt~~L~~~gI~I~~A~I~T~g~~a~D~F~V~ 263 (295)
+...++|+|.|+|||||++.|+.+|+++|+||....-.+. ...+.|+++
T Consensus 19 ~~~~~iLtv~c~DrpGIVa~VS~~La~~g~NI~d~~q~~d--~~~g~FfMr 67 (302)
T 3o1l_A 19 GMRTFRLVIACPDRVGIVAKVSNFLASHNGWITEASHHSD--NLSGWFFMR 67 (302)
T ss_dssp CCCEEEEEEEEECCTTHHHHHHHHHHHTTCCEEEEEEEEE--TTTTEEEEE
T ss_pred ccceEEEEEECCCCCCHHHHHHHHHHHCCCCEEEeeEEec--CCCCeEEEE
Confidence 3456899999999999999999999999999999887654 233467765
No 23
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=97.05 E-value=0.00067 Score=62.37 Aligned_cols=47 Identities=19% Similarity=0.323 Sum_probs=39.4
Q ss_pred ceEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEecCCeeeeEEEEE
Q 022552 215 KRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVS 263 (295)
Q Consensus 215 ~~t~IeV~a~DRPGLL~dIt~~L~~~gI~I~~A~I~T~g~~a~D~F~V~ 263 (295)
..++|+|.|+|||||++.|+.+|+++|+||....-.+ +...+.|+++
T Consensus 6 ~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~--d~~~g~Ffmr 52 (287)
T 3nrb_A 6 NQYVLSLACQDAPGIVSEVSTFLFNNGANIVEAEQFN--DEDSSKFFMR 52 (287)
T ss_dssp TEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEE--ETTTTEEEEE
T ss_pred CeEEEEEECCCCCCHHHHHHHHHHHCCCCEEeeeeee--cCCCCeEEEE
Confidence 4689999999999999999999999999999887754 2344567765
No 24
>2pc6_A Probable acetolactate synthase isozyme III (small; regulatory subunit, structural genomi protein structure initiative; HET: MSE; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: d.58.18.6 d.58.18.6
Probab=97.03 E-value=0.0024 Score=54.15 Aligned_cols=65 Identities=12% Similarity=0.287 Sum_probs=50.3
Q ss_pred eEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEe-c-CCeeeeEEEEEeCCCCCChHHHHHHHHHHHHHc
Q 022552 216 RSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDT-E-GLVAKDKFHVSYGGAALNSSLSQVLVNCLRYYL 285 (295)
Q Consensus 216 ~t~IeV~a~DRPGLL~dIt~~L~~~gI~I~~A~I~T-~-g~~a~D~F~V~~~G~~l~~~~~~~L~~~L~~~L 285 (295)
.+.|.|...|+||+|++|+.+|+++|+||.++.+.+ . .+...=+|.+. |. +..+++|.+.|.+..
T Consensus 4 ~~~IsV~veNrpGvL~rI~~lfs~rg~NI~Sl~v~~t~d~g~sritivV~--~d---~~~leql~kQL~Kl~ 70 (165)
T 2pc6_A 4 RHIISLLMENEAGALSRVAGLFSARGYNIESLSVAPTEDPTLSRMTLVTN--GP---DEIVEQITKQLNKLI 70 (165)
T ss_dssp EEEEEEEEECSTTHHHHHHHHHHHHTCCCCEEEEEECSSTTEEEEEEEEE--EC---HHHHHHHHHHHHHST
T ss_pred EEEEEEEEeCCCcHHHHHHHHHHHCCCcEEEEEEEecCCCCEEEEEEEEe--cc---HHHHHHHHHHhcCCC
Confidence 468899999999999999999999999999999964 4 24455556663 22 457778888877643
No 25
>2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protei nucleotide-binding, transcription regulation, activator; HET: PG4; 2.30A {Escherichia coli}
Probab=96.94 E-value=0.0033 Score=51.82 Aligned_cols=59 Identities=24% Similarity=0.326 Sum_probs=42.9
Q ss_pred EEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEecCCeeeeEEEEEeCCCCCChHHHHHHHHHHHH
Q 022552 218 LLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVSYGGAALNSSLSQVLVNCLRY 283 (295)
Q Consensus 218 ~IeV~a~DRPGLL~dIt~~L~~~gI~I~~A~I~T~g~~a~D~F~V~~~G~~l~~~~~~~L~~~L~~ 283 (295)
.|+|.|.||+|||.+|+++|+++++||..+.+.+.|. +++.-. .........|...+..
T Consensus 2 ~~~v~~~dr~g~l~~i~~~l~~~~~ni~~~~~~~~g~-----i~~~~~--~~~~~~~~~L~~~l~~ 60 (190)
T 2jhe_A 2 RLEVFCEDRLGLTRELLDLLVLRGIDLRGIEIDPIGR-----IYLNFA--ELEFESFSSLMAEIRR 60 (190)
T ss_dssp EEEEEECSCTTHHHHHHHHHHHTTCCEEEEEEETTTE-----EEEEEC--CCCHHHHHHHHHHHHH
T ss_pred EEEEEEecCCcHHHHHHHHHHHcCCCeEEEEEecCCE-----EEEEEE--eCCHHHHHHHHHHHHc
Confidence 4789999999999999999999999999999987632 444322 1223345555555543
No 26
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=96.89 E-value=0.0055 Score=56.26 Aligned_cols=46 Identities=13% Similarity=0.317 Sum_probs=38.2
Q ss_pred eEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEecCCeeeeEEEEE
Q 022552 216 RSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVS 263 (295)
Q Consensus 216 ~t~IeV~a~DRPGLL~dIt~~L~~~gI~I~~A~I~T~g~~a~D~F~V~ 263 (295)
.++|+|.|+|||||++.|+.+|+++|+||....-.+. ...+.|+++
T Consensus 6 ~~iLtv~g~DrpGIVa~Vs~~La~~g~NI~d~~q~~d--~~~g~Ffmr 51 (288)
T 3obi_A 6 QYVLTLSCPDRAGIVSAVSTFLFENGQNILDAQQYND--TESGHFFMR 51 (288)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTEEEEEEEEEEE--TTTTEEEEE
T ss_pred eEEEEEECCCCCCHHHHHHHHHHHCCCcEEeeeeeec--CCCCceEEE
Confidence 5789999999999999999999999999999887642 233456654
No 27
>2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6
Probab=96.82 E-value=0.0049 Score=52.11 Aligned_cols=63 Identities=19% Similarity=0.287 Sum_probs=49.9
Q ss_pred EEEEEEeCCCccHHHHHHHHHHHCCceEEEEEEEEcCC-eE-EEEEEEeecCCCCCCCChHHHHHHHHHHHHh
Q 022552 102 TIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGS-VK-QTKFFITRLDTGRKVEDPDLLERIRLTIINN 172 (295)
Q Consensus 102 t~V~V~~~DrpGLl~~I~~vL~~~glnI~~A~I~T~~~-~~-~D~F~V~~~~~g~~~~d~~~le~L~~~L~~~ 172 (295)
..+.|...|+||+|++++++|++.|+||.+..+....+ +. .-+|.+. + +...+++|...|.+.
T Consensus 4 ~~IsV~v~NrpGvLarIt~lfs~rg~NI~Sl~v~~t~d~~~sriti~V~----~----d~~~leqI~kqL~Kl 68 (164)
T 2f1f_A 4 RILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLSRMTIQTV----G----DEKVLEQIEKQLHKL 68 (164)
T ss_dssp EEEEEEEECCTTHHHHHHHHHHTTTCCCSEEEEEECSCSSEEEEEEEEE----S----CHHHHHHHHHHHHHS
T ss_pred EEEEEEEeCCCcHHHHHHHHHHHCCCCeeeceeeecCCCCEEEEEEEEe----c----cHHHHHHHHHHHcCC
Confidence 57899999999999999999999999999999987764 44 3345553 2 246788888888763
No 28
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=96.67 E-value=0.0019 Score=61.37 Aligned_cols=40 Identities=15% Similarity=0.292 Sum_probs=36.5
Q ss_pred ceEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEecCC
Q 022552 215 KRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGL 254 (295)
Q Consensus 215 ~~t~IeV~a~DRPGLL~dIt~~L~~~gI~I~~A~I~T~g~ 254 (295)
...+|+|.|+|||||++.|+.+|+++|+||....-.+.++
T Consensus 11 ~~~~lt~~g~Dr~Giv~~vs~~l~~~~~nI~d~~q~~~~~ 50 (415)
T 3p96_A 11 VSVLITVTGVDQPGVTATLFEVLSRHGVELLNVEQVVIRH 50 (415)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHTTTTCEEEEEEEEEETT
T ss_pred CeEEEEEEcCCCCCHHHHHHHHHHHCCCCEEEeeeEEECC
Confidence 4689999999999999999999999999999999877654
No 29
>2pc6_A Probable acetolactate synthase isozyme III (small; regulatory subunit, structural genomi protein structure initiative; HET: MSE; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: d.58.18.6 d.58.18.6
Probab=96.44 E-value=0.01 Score=50.22 Aligned_cols=63 Identities=14% Similarity=0.226 Sum_probs=49.6
Q ss_pred EEEEEEeCCCccHHHHHHHHHHHCCceEEEEEEEEcCC-eE-EEEEEEeecCCCCCCCChHHHHHHHHHHHHh
Q 022552 102 TIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGS-VK-QTKFFITRLDTGRKVEDPDLLERIRLTIINN 172 (295)
Q Consensus 102 t~V~V~~~DrpGLl~~I~~vL~~~glnI~~A~I~T~~~-~~-~D~F~V~~~~~g~~~~d~~~le~L~~~L~~~ 172 (295)
..+.|...|+||.|++++++|++.|+||.+..+..+.+ +. .-+|.+.. ++..+++|...|.+.
T Consensus 5 ~~IsV~veNrpGvL~rI~~lfs~rg~NI~Sl~v~~t~d~g~sritivV~~--------d~~~leql~kQL~Kl 69 (165)
T 2pc6_A 5 HIISLLMENEAGALSRVAGLFSARGYNIESLSVAPTEDPTLSRMTLVTNG--------PDEIVEQITKQLNKL 69 (165)
T ss_dssp EEEEEEEECSTTHHHHHHHHHHHHTCCCCEEEEEECSSTTEEEEEEEEEE--------CHHHHHHHHHHHHHS
T ss_pred EEEEEEEeCCCcHHHHHHHHHHHCCCcEEEEEEEecCCCCEEEEEEEEec--------cHHHHHHHHHHhcCC
Confidence 57899999999999999999999999999999987664 44 33455542 146778888887763
No 30
>3s1t_A Aspartokinase; ACT domain, threonine binding, regulatory domain of aspartok transferase; 1.63A {Mycobacterium tuberculosis}
Probab=96.39 E-value=0.12 Score=43.86 Aligned_cols=110 Identities=15% Similarity=0.173 Sum_probs=68.5
Q ss_pred CeEEEEE-EeCCCccHHHHHHHHHHHCCceEEEEEEEEcC--CeE-EEEEEEeecCCCCCCCChHHHHHHHHHHHHhhcc
Q 022552 100 DATIVQL-SFGDRLGALIDTMNALKDLGLDVAKGTVNTEG--SVK-QTKFFITRLDTGRKVEDPDLLERIRLTIINNLLK 175 (295)
Q Consensus 100 ~~t~V~V-~~~DrpGLl~~I~~vL~~~glnI~~A~I~T~~--~~~-~D~F~V~~~~~g~~~~d~~~le~L~~~L~~~L~~ 175 (295)
+.+.|+| ..+|+||.+++|...|++.|+||.--...... .+. --.|.|... + +++....|.+ +..
T Consensus 15 ~~~~Iti~~~~~~~G~~a~If~~La~~~I~vd~I~q~~s~~~~g~~~isftv~~~-------~---~~~a~~~L~~-~~~ 83 (181)
T 3s1t_A 15 SEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCSRD-------V---GPAAVEKLDS-LRN 83 (181)
T ss_dssp SEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCCEEECCCCTTTCEEEEEEEEETT-------T---HHHHHHHHHH-THH
T ss_pred CEEEEEEecCCCCcCHHHHHHHHHHHcCCcEEEEEecCCcccCCccEEEEEEehh-------H---HHHHHHHHHH-HHH
Confidence 4455555 47899999999999999999999754432222 333 234666431 1 1222333333 110
Q ss_pred cCCCchhHhhhccccCccCCcccccccccceEEecCCCCceEEEEEEeC---CCcchHHHHHHHHHhCCceEEEEE
Q 022552 176 YHPESSEQLAMGEAFGIKAPEKKLDVDIATHIHVKEDGPKRSLLYIETA---DRPGLLVEIMKIIADVNVDVESAE 248 (295)
Q Consensus 176 ~~~~~~~~La~~~~~~~~~~~r~~~~~~~~~V~i~~~~~~~t~IeV~a~---DRPGLL~dIt~~L~~~gI~I~~A~ 248 (295)
.+. ...|.+.+ +...+.|.+. ++||+++++.++|++.||||....
T Consensus 84 -------el~------------------~~~v~~~~---~va~VsvVG~gm~~~~Gvaa~~f~aLa~~~InI~~Is 131 (181)
T 3s1t_A 84 -------EIG------------------FSQLLYDD---HIGKVSLIGAGMRSHPGVTATFCEALAAVGVNIELIS 131 (181)
T ss_dssp -------HHC------------------CSEEEEES---CEEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCEEE
T ss_pred -------hcC------------------cceEEEeC---CEEEEEEEecccccCchHHHHHHHHHHHCCCcEEEEE
Confidence 000 00122222 4566776655 899999999999999999998877
No 31
>2fgc_A Acetolactate synthase, small subunit; regulatory subunit, structural genomi protein structure initiative; 2.30A {Thermotoga maritima} SCOP: d.58.18.6 d.58.18.6
Probab=96.26 E-value=0.01 Score=51.38 Aligned_cols=64 Identities=11% Similarity=0.180 Sum_probs=47.6
Q ss_pred eEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEE-ecC-CeeeeEEEEEeCCCCCChHHHHHHHHHHHHH
Q 022552 216 RSLLYIETADRPGLLVEIMKIIADVNVDVESAEID-TEG-LVAKDKFHVSYGGAALNSSLSQVLVNCLRYY 284 (295)
Q Consensus 216 ~t~IeV~a~DRPGLL~dIt~~L~~~gI~I~~A~I~-T~g-~~a~D~F~V~~~G~~l~~~~~~~L~~~L~~~ 284 (295)
.+.|.|...|+||.|++|+.+|+++|+||.+..+. |.. +...=++.|... +...++|++.|.+.
T Consensus 29 ~~~LsVlVeN~pGvLaRItglfsrRG~NI~SLtV~~ted~gisRitIvV~g~-----e~~ieqL~kQL~KL 94 (193)
T 2fgc_A 29 EHLVSMLVHNKPGVMRKVANLFARRGFNISSITVGESETPGLSRLVIMVKGD-----DKTIEQIEKQAYKL 94 (193)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCEEEEEEEEECSSTTEEEEEEEEEEC-----TTHHHHHHHHHTTS
T ss_pred EEEEEEEECCCChHHHHHHHHHHHCCceEEEEEeeccCCCCEEEEEEEEECC-----HHHHHHHHHHhcCc
Confidence 57899999999999999999999999999999986 544 334444555322 33556677766553
No 32
>2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protei nucleotide-binding, transcription regulation, activator; HET: PG4; 2.30A {Escherichia coli}
Probab=96.15 E-value=0.023 Score=46.58 Aligned_cols=59 Identities=14% Similarity=0.172 Sum_probs=44.6
Q ss_pred EEEEEeCCCccHHHHHHHHHHHCCceEEEEEEEEcCCeEEEEEEEeecCCCCCCCChHHHHHHHHHHHH
Q 022552 103 IVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFITRLDTGRKVEDPDLLERIRLTIIN 171 (295)
Q Consensus 103 ~V~V~~~DrpGLl~~I~~vL~~~glnI~~A~I~T~~~~~~D~F~V~~~~~g~~~~d~~~le~L~~~L~~ 171 (295)
.|.|.|.||+|++.+|+.+|+..++||....+.+. +. +++.-+ ..+.+.+..|...|..
T Consensus 2 ~~~v~~~dr~g~l~~i~~~l~~~~~ni~~~~~~~~--g~---i~~~~~-----~~~~~~~~~L~~~l~~ 60 (190)
T 2jhe_A 2 RLEVFCEDRLGLTRELLDLLVLRGIDLRGIEIDPI--GR---IYLNFA-----ELEFESFSSLMAEIRR 60 (190)
T ss_dssp EEEEEECSCTTHHHHHHHHHHHTTCCEEEEEEETT--TE---EEEEEC-----CCCHHHHHHHHHHHHH
T ss_pred EEEEEEecCCcHHHHHHHHHHHcCCCeEEEEEecC--CE---EEEEEE-----eCCHHHHHHHHHHHHc
Confidence 57899999999999999999999999999999666 33 223331 1134666777777766
No 33
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=95.94 E-value=0.013 Score=51.82 Aligned_cols=38 Identities=21% Similarity=0.174 Sum_probs=31.0
Q ss_pred eEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEecC
Q 022552 216 RSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEG 253 (295)
Q Consensus 216 ~t~IeV~a~DRPGLL~dIt~~L~~~gI~I~~A~I~T~g 253 (295)
...|.|.+.||||+|++|+++|+++++||...+..+..
T Consensus 4 ~VtL~I~a~DRpGLLsDIt~vLAe~kiNIltIn~~~~~ 41 (223)
T 1y7p_A 4 LRGLRIIAENKIGVLRDLTTIIAEEGGNITFAQTFLIK 41 (223)
T ss_dssp CEEEEEEEECCTTHHHHHHHHCC----CEEEEEEEECC
T ss_pred eEEEEEEEcCCCCHHHHHHHHHHHcCCCceEEEEEccc
Confidence 46789999999999999999999999999999998853
No 34
>4go7_X Aspartokinase; transferase; 2.00A {Mycobacterium tuberculosis} PDB: 4go5_X
Probab=95.89 E-value=0.043 Score=47.70 Aligned_cols=155 Identities=14% Similarity=0.108 Sum_probs=84.7
Q ss_pred CCCcEE-EEeecCCCCeEEEEEE-eCCCccHHHHHHHHHHHCCceEEEEEEEEc--CCeEE-EEEEEeecCCCCCCCChH
Q 022552 86 IPMPHV-LIDQDSNSDATIVQLS-FGDRLGALIDTMNALKDLGLDVAKGTVNTE--GSVKQ-TKFFITRLDTGRKVEDPD 160 (295)
Q Consensus 86 ~~~p~V-~i~~~~~~~~t~V~V~-~~DrpGLl~~I~~vL~~~glnI~~A~I~T~--~~~~~-D~F~V~~~~~g~~~~d~~ 160 (295)
.++|.| -|.. +.+...|+|. .+|+||..++|.+.|++.|+||---..... .++.. -.|.+...
T Consensus 21 mE~~vVtGIa~--~~~~a~Iti~g~~~~pG~aa~IF~~La~~~InVDmI~Qs~s~~~~~~~~~sftv~~~---------- 88 (200)
T 4go7_X 21 MEDPILTGVAH--DRSEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCSRD---------- 88 (200)
T ss_dssp CCSCEEEEEEE--ECSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCCEECCCCC--CCEEEEEEEEEGG----------
T ss_pred cccCcEEEEEc--cCCEEEEEEecCCCCccHHHHHHHHHHHhCcceEEEeeccccccccceEEEEecchh----------
Confidence 345655 3333 3345677765 699999999999999999999986433222 12333 34555431
Q ss_pred HHHHHHHHHHHhhcccCCCchhHhhhccccCccCCcccccccccceEEecCCCCceEEEEEEeCCCcchHHHHHHHHHhC
Q 022552 161 LLERIRLTIINNLLKYHPESSEQLAMGEAFGIKAPEKKLDVDIATHIHVKEDGPKRSLLYIETADRPGLLVEIMKIIADV 240 (295)
Q Consensus 161 ~le~L~~~L~~~L~~~~~~~~~~La~~~~~~~~~~~r~~~~~~~~~V~i~~~~~~~t~IeV~a~DRPGLL~dIt~~L~~~ 240 (295)
.+++....|.+... .+. ...|.+++.-..-+++=.-...+||+.+++.++|++.
T Consensus 89 d~~~~~~~l~~~~~--------~~~------------------~~~v~~~~~iakVSvVG~GM~~~~GVaak~F~aLa~~ 142 (200)
T 4go7_X 89 VGPAAVEKLDSLRN--------EIG------------------FSQLLYDDHIGKVSLIGAGMRSHPGVTATFCEALAAV 142 (200)
T ss_dssp GHHHHHHHHHTTHH--------HHC------------------CSEEEEECCEEEEEEEEESCTTCHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHh--------hhc------------------eeeEEEecCeeeeeeeccccccCCCcHHHHHHHHHHC
Confidence 12232333332111 110 0012222221122333344668999999999999999
Q ss_pred CceEEEEEEEecCCeeeeEEEEEeCCCCCChHHHHHHHHHHHHHcCCCC
Q 022552 241 NVDVESAEIDTEGLVAKDKFHVSYGGAALNSSLSQVLVNCLRYYLRRPE 289 (295)
Q Consensus 241 gI~I~~A~I~T~g~~a~D~F~V~~~G~~l~~~~~~~L~~~L~~~L~~~~ 289 (295)
||||.... | .+. .=.|.|. ++..++-.++|.++-..+.
T Consensus 143 ~INI~mIs--t-SEi-~IS~vV~-------~~d~~~Av~aLH~~F~L~~ 180 (200)
T 4go7_X 143 GVNIELIS--T-SEI-RISVLCR-------DTELDKAVVALHEAFGLGG 180 (200)
T ss_dssp TCCCCEEE--E-CSS-EEEEEEE-------GGGHHHHHHHHHHHHTC--
T ss_pred CCCEEEEE--c-cCC-EEEEEEe-------HHHHHHHHHHHHHHhCCCC
Confidence 99999875 3 222 2235552 2233444556666644443
No 35
>2fgc_A Acetolactate synthase, small subunit; regulatory subunit, structural genomi protein structure initiative; 2.30A {Thermotoga maritima} SCOP: d.58.18.6 d.58.18.6
Probab=95.40 E-value=0.038 Score=47.83 Aligned_cols=63 Identities=13% Similarity=0.207 Sum_probs=47.5
Q ss_pred eEEEEEEeCCCccHHHHHHHHHHHCCceEEEEEEEEcCC-eEE-EEEEEeecCCCCCCCChHHHHHHHHHHHH
Q 022552 101 ATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGS-VKQ-TKFFITRLDTGRKVEDPDLLERIRLTIIN 171 (295)
Q Consensus 101 ~t~V~V~~~DrpGLl~~I~~vL~~~glnI~~A~I~T~~~-~~~-D~F~V~~~~~g~~~~d~~~le~L~~~L~~ 171 (295)
...+.|...|+||.|++|+++|+..|+||.+-.+..+.+ +.. -++.|.. . +..+++|...|.+
T Consensus 29 ~~~LsVlVeN~pGvLaRItglfsrRG~NI~SLtV~~ted~gisRitIvV~g----~----e~~ieqL~kQL~K 93 (193)
T 2fgc_A 29 EHLVSMLVHNKPGVMRKVANLFARRGFNISSITVGESETPGLSRLVIMVKG----D----DKTIEQIEKQAYK 93 (193)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCEEEEEEEEECSSTTEEEEEEEEEE----C----TTHHHHHHHHHTT
T ss_pred EEEEEEEECCCChHHHHHHHHHHHCCceEEEEEeeccCCCCEEEEEEEEEC----C----HHHHHHHHHHhcC
Confidence 468999999999999999999999999999988875544 443 3455543 1 2456777777665
No 36
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=95.05 E-value=0.16 Score=48.55 Aligned_cols=110 Identities=20% Similarity=0.232 Sum_probs=70.4
Q ss_pred CCeEEEEEE-eCCCccHHHHHHHHHHHCCceEEEEEEEEcC--CeE-EEEEEEeecCCCCCCCChHHHHHHHHHHHHhhc
Q 022552 99 SDATIVQLS-FGDRLGALIDTMNALKDLGLDVAKGTVNTEG--SVK-QTKFFITRLDTGRKVEDPDLLERIRLTIINNLL 174 (295)
Q Consensus 99 ~~~t~V~V~-~~DrpGLl~~I~~vL~~~glnI~~A~I~T~~--~~~-~D~F~V~~~~~g~~~~d~~~le~L~~~L~~~L~ 174 (295)
.+.+.|+|. .+|++|.+++|.+.|+++|+||..-...+.. .+. .-.|.|... +.++ ....|++ +.
T Consensus 262 ~~~~~i~v~~~~~~~g~~~~If~~La~~~I~vd~I~q~~s~~~~g~~~isf~v~~~-------~~~~---a~~~l~~-~~ 330 (421)
T 3ab4_A 262 KSEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVFSVEDGTTDITFTCPRS-------DGRR---AMEILKK-LQ 330 (421)
T ss_dssp CSEEEEEEEEEESSTTHHHHHHHHHHHTTCCCEEEEECCCC--CCEEEEEEEEETT-------THHH---HHHHHHH-HH
T ss_pred CCEEEEEEeccCCcccHHHHHHHHHHHcCCcEEEEEccCccccCCcceEEEEEech-------hHHH---HHHHHHH-HH
Confidence 345677787 6999999999999999999999866543332 232 234656431 1222 2233333 21
Q ss_pred ccCCCchhHhhhccccCccCCcccccccccceEEecCCCCceEEEEEEeC---CCcchHHHHHHHHHhCCceEEEE
Q 022552 175 KYHPESSEQLAMGEAFGIKAPEKKLDVDIATHIHVKEDGPKRSLLYIETA---DRPGLLVEIMKIIADVNVDVESA 247 (295)
Q Consensus 175 ~~~~~~~~~La~~~~~~~~~~~r~~~~~~~~~V~i~~~~~~~t~IeV~a~---DRPGLL~dIt~~L~~~gI~I~~A 247 (295)
. +.. + ..|.+. .+...+.|.+. ++||.++++.++|++.||||...
T Consensus 331 ~-~~~---------------------~---~~v~~~---~~~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~~i 378 (421)
T 3ab4_A 331 V-QGN---------------------W---TNVLYD---DQVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIELI 378 (421)
T ss_dssp T-TTT---------------------C---SEEEEE---CCEEEEEEECGGGTSCTTHHHHHHHHHHHTTCCCCEE
T ss_pred H-HcC---------------------C---ceEEEe---CCeEEEEEEccCcccCccHHHHHHHHHHHCCCCEEEE
Confidence 1 000 0 012222 24577777775 89999999999999999999954
No 37
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=94.97 E-value=0.044 Score=48.31 Aligned_cols=38 Identities=11% Similarity=0.118 Sum_probs=31.5
Q ss_pred eEEEEEEeCCCccHHHHHHHHHHHCCceEEEEEEEEcC
Q 022552 101 ATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEG 138 (295)
Q Consensus 101 ~t~V~V~~~DrpGLl~~I~~vL~~~glnI~~A~I~T~~ 138 (295)
...+.|.+.||+|+|++|+++|++++.||...+..+..
T Consensus 4 ~VtL~I~a~DRpGLLsDIt~vLAe~kiNIltIn~~~~~ 41 (223)
T 1y7p_A 4 LRGLRIIAENKIGVLRDLTTIIAEEGGNITFAQTFLIK 41 (223)
T ss_dssp CEEEEEEEECCTTHHHHHHHHCC----CEEEEEEEECC
T ss_pred eEEEEEEEcCCCCHHHHHHHHHHHcCCCceEEEEEccc
Confidence 35789999999999999999999999999999999976
No 38
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=94.73 E-value=0.091 Score=42.31 Aligned_cols=36 Identities=22% Similarity=0.356 Sum_probs=32.5
Q ss_pred eEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEe
Q 022552 216 RSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDT 251 (295)
Q Consensus 216 ~t~IeV~a~DRPGLL~dIt~~L~~~gI~I~~A~I~T 251 (295)
...|.|..+|+||.|++|+..|++.|+||....+..
T Consensus 6 ~~~i~v~v~d~~G~l~~i~~~la~~~inI~~i~~~~ 41 (144)
T 2f06_A 6 AKQLSIFLENKSGRLTEVTEVLAKENINLSALCIAE 41 (144)
T ss_dssp EEEEEEEECSSSSHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred EEEEEEEecCCCcHHHHHHHHHHHCCCCEEEEEEEe
Confidence 367888899999999999999999999999988764
No 39
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=94.43 E-value=0.074 Score=50.89 Aligned_cols=48 Identities=21% Similarity=0.320 Sum_probs=42.3
Q ss_pred ceEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEecCCeeeeEEEE
Q 022552 215 KRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHV 262 (295)
Q Consensus 215 ~~t~IeV~a~DRPGLL~dIt~~L~~~gI~I~~A~I~T~g~~a~D~F~V 262 (295)
+...|-+.-.|+||.+..|+.+|.++||||......+.|+.+.-++.+
T Consensus 330 ~~~rl~~~h~d~PGvi~~i~~iL~~~~iNIa~m~~~r~g~~A~~vidv 377 (404)
T 1sc6_A 330 GGRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQTSAQMGYVVIDI 377 (404)
T ss_dssp SSEEEEEEEESCTTHHHHHHHHHHHTTCEEEEEEEEECSSEEEEEEEE
T ss_pred CcceEEEEeCCCCCHHHHHHHHHHHcCCCHHHhhccCCCCEEEEEEEc
Confidence 445677888999999999999999999999999999988887777766
No 40
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=93.98 E-value=0.33 Score=47.84 Aligned_cols=62 Identities=19% Similarity=0.337 Sum_probs=47.9
Q ss_pred ceEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEec--CCeeeeEEEEEeCCCCCChHHHHHHHH
Q 022552 215 KRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTE--GLVAKDKFHVSYGGAALNSSLSQVLVN 279 (295)
Q Consensus 215 ~~t~IeV~a~DRPGLL~dIt~~L~~~gI~I~~A~I~T~--g~~a~D~F~V~~~G~~l~~~~~~~L~~ 279 (295)
..+.|.+.-.|+||.+..|+.+|.++||||..+++... |+.+.=++.+ ..+++++.+++|++
T Consensus 453 ~~~~l~v~~~D~PG~I~~v~~~Lg~~~INIa~m~v~r~~~~~~a~~~i~v---d~~~~~~~l~~l~~ 516 (529)
T 1ygy_A 453 QGINLIIHYVDRPGALGKIGTLLGTAGVNIQAAQLSEDAEGPGATILLRL---DQDVPDDVRTAIAA 516 (529)
T ss_dssp CSEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEECSSSSCEEEEEEE---SSCCCHHHHHHHHH
T ss_pred CccEEEEEcCCCCchHHHHHHHHHhcCCCeeeEEEecCCCCCEEEEEEEE---CCCCCHHHHHHHhc
Confidence 46888899999999999999999999999999999764 4445444444 34555666666654
No 41
>2qmx_A Prephenate dehydratase; APC86053, L-Phe inhibition, PDT, CHL tepidum TLS, structural genomics, PSI-2, protein structure initiative; HET: PHE; 2.30A {Chlorobium tepidum tls}
Probab=93.51 E-value=0.23 Score=45.35 Aligned_cols=54 Identities=13% Similarity=0.166 Sum_probs=44.4
Q ss_pred ceEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEecCCe-eeeEEEEEeCCCC
Q 022552 215 KRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLV-AKDKFHVSYGGAA 268 (295)
Q Consensus 215 ~~t~IeV~a~DRPGLL~dIt~~L~~~gI~I~~A~I~T~g~~-a~D~F~V~~~G~~ 268 (295)
+.|.|-+..+|+||-|+++-..|+.+|||+.+.+..-...+ -+=.|||.-+|..
T Consensus 199 ~ktsl~f~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfvD~eg~~ 253 (283)
T 2qmx_A 199 QKTSIVFALPNEQGSLFRALATFALRGIDLTKIESRPSRKKAFEYLFYADFIGHR 253 (283)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTEEEEEEEEESCT
T ss_pred ceEEEEEEcCCCCchHHHHHHHHHHcCCCeeEEEeeEcCCCCcceEEEEEEecCC
Confidence 36777788889999999999999999999999999765544 5667888547765
No 42
>3mwb_A Prephenate dehydratase; L-Phe, PSI, MCSG, structural genomics, midwest center for ST genomics, protein structure initiative, lyase; HET: MSE PHE; 2.00A {Arthrobacter aurescens}
Probab=93.49 E-value=0.26 Score=45.63 Aligned_cols=67 Identities=22% Similarity=0.321 Sum_probs=48.7
Q ss_pred ceEEEEEEeC-CCcchHHHHHHHHHhCCceEEEEEEEecCCe-eeeEEEEEeCCCCCChHHHHHHHHHHH
Q 022552 215 KRSLLYIETA-DRPGLLVEIMKIIADVNVDVESAEIDTEGLV-AKDKFHVSYGGAALNSSLSQVLVNCLR 282 (295)
Q Consensus 215 ~~t~IeV~a~-DRPGLL~dIt~~L~~~gI~I~~A~I~T~g~~-a~D~F~V~~~G~~l~~~~~~~L~~~L~ 282 (295)
+.|.|-+..+ |+||-|+++-..|+.+|||+.+.+..-.... -+=.|||.-+|.. .++..++.-+.|.
T Consensus 200 ~kTSl~f~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfiD~eg~~-~d~~v~~aL~~L~ 268 (313)
T 3mwb_A 200 DKTTVVVPLPEDHPGALMEILDQFASRGVNLSRIESRPTGQYLGHYFFSIDADGHA-TDSRVADALAGLH 268 (313)
T ss_dssp EEEEEEEECSSCCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTSEEEEEEEESCT-TSHHHHHHHHHHH
T ss_pred CeEEEEEEeCCCCCCHHHHHHHHHHHCCccEEEEEEeecCCCCccEEEEEEEeCCC-CcHHHHHHHHHHH
Confidence 4788888886 9999999999999999999999998765444 4556888547765 3443333333343
No 43
>2qmw_A PDT, prephenate dehydratase; APC85812, prephenate dehydratase (PDT), staphylococcus aureu aureus MU50, structural genomics, PSI-2; 2.30A {Staphylococcus aureus subsp} SCOP: c.94.1.1 d.58.18.3
Probab=93.12 E-value=0.35 Score=43.73 Aligned_cols=66 Identities=18% Similarity=0.239 Sum_probs=48.1
Q ss_pred ceEEEEEEe---CCCcchHHHHHHHHHhCCceEEEEEEEecCCe-eeeEEEEEeCCCCCChHHHHHHHHHHH
Q 022552 215 KRSLLYIET---ADRPGLLVEIMKIIADVNVDVESAEIDTEGLV-AKDKFHVSYGGAALNSSLSQVLVNCLR 282 (295)
Q Consensus 215 ~~t~IeV~a---~DRPGLL~dIt~~L~~~gI~I~~A~I~T~g~~-a~D~F~V~~~G~~l~~~~~~~L~~~L~ 282 (295)
+.|.|-+.. .|+||-|+++-..|+.+|||+.+.+..-.... -+=.|||.-+ . +.++..++.-+.|.
T Consensus 185 ~ktsl~f~~~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfiD~e-~-~~d~~v~~aL~~L~ 254 (267)
T 2qmw_A 185 NATSLMFLITPMHDKPGLLASVLNTFALFNINLSWIESRPLKTQLGMYRFFVQAD-S-AITTDIKKVIAILE 254 (267)
T ss_dssp SCSEEEEEEEESSCCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTCEEEEEEES-C-CSCHHHHHHHHHHH
T ss_pred CeEEEEEEcCCCCCCcChHHHHHHHHHHcCCCeeEEEEeecCCCCccEEEEEEEe-c-CCcHHHHHHHHHHH
Confidence 467777777 89999999999999999999999999765544 5567888536 3 34554333334443
No 44
>3luy_A Probable chorismate mutase; structural genomics, APC38059, 3-phenylp PSI-2, protein structure initiative; HET: PPY; 2.00A {Bifidobacterium adolescentis}
Probab=92.72 E-value=0.77 Score=42.73 Aligned_cols=55 Identities=15% Similarity=0.190 Sum_probs=41.4
Q ss_pred ceEEEEEEeC--CCcchHHHHHHHHHhCCceEEEEEEEecCCe-eeeEEEEEeCCCCC
Q 022552 215 KRSLLYIETA--DRPGLLVEIMKIIADVNVDVESAEIDTEGLV-AKDKFHVSYGGAAL 269 (295)
Q Consensus 215 ~~t~IeV~a~--DRPGLL~dIt~~L~~~gI~I~~A~I~T~g~~-a~D~F~V~~~G~~l 269 (295)
+.+.+-+..+ |+||-||++-..|+.+|||+.+.+..-.... -+=.|||.-+|..-
T Consensus 205 ~kts~i~~~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfiD~eg~~~ 262 (329)
T 3luy_A 205 EYESVLTLIPLVTGPGVLANLLDVFRDAGLNMTSFISRPIKGRTGTYSFIVTLDAAPW 262 (329)
T ss_dssp CEEEEEEEECSCCSTTHHHHHHHHHHHTTCCEEEEEEEEETTEEEEEEEEEEESSCTT
T ss_pred CceEEEEEecCCCCCCHHHHHHHHHHHCCcceEEEEeeECCCCCccEEEEEEEeCCcC
Confidence 3344444454 7999999999999999999999999766555 45568875477653
No 45
>3c1m_A Probable aspartokinase; allosteric inhibition, threonine-sensitive, ACT DOMA amino-acid biosynthesis, threonine biosynthesis; HET: ANP; 2.30A {Methanocaldococcus jannaschii} PDB: 3c1n_A 3c20_A 2hmf_A*
Probab=92.31 E-value=0.73 Score=44.75 Aligned_cols=117 Identities=9% Similarity=0.129 Sum_probs=70.6
Q ss_pred CCeEEEEEEe---CCCccHHHHHHHHHHHCCceEEEEEEEEcCCeEEEEEEEeecCCCCCCCChHHHHHHHHHHHHhhcc
Q 022552 99 SDATIVQLSF---GDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFITRLDTGRKVEDPDLLERIRLTIINNLLK 175 (295)
Q Consensus 99 ~~~t~V~V~~---~DrpGLl~~I~~vL~~~glnI~~A~I~T~~~~~~D~F~V~~~~~g~~~~d~~~le~L~~~L~~~L~~ 175 (295)
.+.+.|+|.+ .+++|..+++..+|+++|+||..-...+..... .|.|... ..++....|.+.+..
T Consensus 316 ~~~a~Isv~g~~m~~~~G~~a~if~~La~~~InV~~IsQ~tse~~I--s~~V~~~----------d~~~a~~~L~~~l~~ 383 (473)
T 3c1m_A 316 KNVALINIFGAGMVGVSGTAARIFKALGEEEVNVILISQGSSETNI--SLVVSEE----------DVDKALKALKREFGD 383 (473)
T ss_dssp EEEEEEEEEECSSSCHHHHHHHHHHHHHHTTCCEEEEEECCTTCCE--EEEEEGG----------GHHHHHHHHHHHHCC
T ss_pred CCeEEEEEecCCCCCCcCHHHHHHHHHHHcCCcEEEEEecCCCCEE--EEEEech----------HHHHHHHHHHHHHhh
Confidence 4566788886 688899999999999999999876553332222 3666432 123333444443310
Q ss_pred cCCCchhHhhhccccCccCCcccccccccceEEecCCCCceEEEEEEeC---CCcchHHHHHHHHHhCCceEEEE
Q 022552 176 YHPESSEQLAMGEAFGIKAPEKKLDVDIATHIHVKEDGPKRSLLYIETA---DRPGLLVEIMKIIADVNVDVESA 247 (295)
Q Consensus 176 ~~~~~~~~La~~~~~~~~~~~r~~~~~~~~~V~i~~~~~~~t~IeV~a~---DRPGLL~dIt~~L~~~gI~I~~A 247 (295)
. ... .+. . .... ..|.+. .+...+.|.+. ++||.++++.++|++.||||...
T Consensus 384 --~--~~~-----~~~-----~--~~~~-~~v~~~---~~~a~vsvVG~gm~~~~Gvaak~f~aL~~~~InI~mi 438 (473)
T 3c1m_A 384 --F--GKK-----SFL-----N--NNLI-RDVSVD---KDVCVISVVGAGMRGAKGIAGKIFTAVSESGANIKMI 438 (473)
T ss_dssp -------------CTT-----S--CCCE-EEEEEE---EEEEEEEEECTTTTTCTTHHHHHHHHHHHHTCCCCEE
T ss_pred --h--ccc-----ccc-----c--cccc-ceEEEe---CCcEEEEEEecCCCCChhHHHHHHHHHHHCCCCEEEE
Confidence 0 000 000 0 0000 113322 24577888876 59999999999999999999443
No 46
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=92.19 E-value=0.51 Score=45.04 Aligned_cols=48 Identities=15% Similarity=0.169 Sum_probs=39.9
Q ss_pred CeEEEEEEeCCCccHHHHHHHHHHHCCceEEEEEEEEcCCeEEEEEEE
Q 022552 100 DATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFI 147 (295)
Q Consensus 100 ~~t~V~V~~~DrpGLl~~I~~vL~~~glnI~~A~I~T~~~~~~D~F~V 147 (295)
+...+.+.-.|+||.+..|..+|.++|+||..-.+.+.++..+-++.+
T Consensus 330 ~~~rl~~~h~d~PGvi~~i~~iL~~~~iNIa~m~~~r~g~~A~~vidv 377 (404)
T 1sc6_A 330 GGRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQTSAQMGYVVIDI 377 (404)
T ss_dssp SSEEEEEEEESCTTHHHHHHHHHHHTTCEEEEEEEEECSSEEEEEEEE
T ss_pred CcceEEEEeCCCCCHHHHHHHHHHHcCCCHHHhhccCCCCEEEEEEEc
Confidence 355788999999999999999999999999999999966655444444
No 47
>3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis}
Probab=91.91 E-value=1 Score=45.20 Aligned_cols=141 Identities=15% Similarity=0.145 Sum_probs=84.7
Q ss_pred CCeEEEEEE-eCCCccHHHHHHHHHHHCCceEEEEEEEEcC---Ce--EE-EEEEEeecCCCCCCCChHHHHHHHHHHHH
Q 022552 99 SDATIVQLS-FGDRLGALIDTMNALKDLGLDVAKGTVNTEG---SV--KQ-TKFFITRLDTGRKVEDPDLLERIRLTIIN 171 (295)
Q Consensus 99 ~~~t~V~V~-~~DrpGLl~~I~~vL~~~glnI~~A~I~T~~---~~--~~-D~F~V~~~~~g~~~~d~~~le~L~~~L~~ 171 (295)
.+...|+|. .+|+||..++|.+.|++.|+||.--...... ++ .. -.|.+.. +.+++....|++
T Consensus 442 ~~~a~i~i~~~~~~~g~~~~if~~La~~~I~vDmI~q~~~~~~~~g~~~~~isftv~~----------~d~~~a~~~l~~ 511 (600)
T 3l76_A 442 QDQAQIAIRHVPDRPGMAAQLFTALAEANISVDMIIQSQRCRINQGTPCRDIAFMVAE----------GDSSQAEAILQP 511 (600)
T ss_dssp CSEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCEEEEEEECCCSSSSCEEEEEEEEEH----------HHHHHHHHHHHH
T ss_pred CCEEEEEEecCCCCccHHHHHHHHHHHcCCcEEEEEecccccccCCCccceEEEEEeH----------HHHHHHHHHHHH
Confidence 345666664 6999999999999999999999544333322 13 22 2355543 334444444444
Q ss_pred hhcccCCCchhHhhhccccCccCCcccccccccceEEecCCCCceEEEEEEe---CCCcchHHHHHHHHHhCCceEEEEE
Q 022552 172 NLLKYHPESSEQLAMGEAFGIKAPEKKLDVDIATHIHVKEDGPKRSLLYIET---ADRPGLLVEIMKIIADVNVDVESAE 248 (295)
Q Consensus 172 ~L~~~~~~~~~~La~~~~~~~~~~~r~~~~~~~~~V~i~~~~~~~t~IeV~a---~DRPGLL~dIt~~L~~~gI~I~~A~ 248 (295)
+.. +.+ ..+|.+++ +...|.|.+ ..+||..+++.++|++.||||....
T Consensus 512 -~~~-~~~------------------------~~~v~~~~---~~akVSiVG~GM~~~~Gvaa~~f~aL~~~~Ini~mis 562 (600)
T 3l76_A 512 -LIK-DWL------------------------DAAIVVNK---AIAKVSIVGSGMIGHPGVAAHFFAALAQENINIEMIA 562 (600)
T ss_dssp -HTT-TST------------------------TCEEEEEC---CEEEEEEECGGGTTCTTHHHHHHHHHHTTTCCCCEEE
T ss_pred -HHH-hcC------------------------CceEEEeC---CeEEEEEECcccccCccHHHHHHHHHHHCCCceEEEE
Confidence 211 000 01122222 457777775 5999999999999999999998766
Q ss_pred EEecCCeeeeEEEEEeCCCCCChHHHHHHHHHHHHHcCCCC
Q 022552 249 IDTEGLVAKDKFHVSYGGAALNSSLSQVLVNCLRYYLRRPE 289 (295)
Q Consensus 249 I~T~g~~a~D~F~V~~~G~~l~~~~~~~L~~~L~~~L~~~~ 289 (295)
|-. ..=.+.|. ++..++..++|+++.....
T Consensus 563 --tSE--i~Is~vV~-------~~~~~~Av~alh~~F~l~~ 592 (600)
T 3l76_A 563 --TSE--IKISCVVP-------QDRGVDALKAAHSAFNLAG 592 (600)
T ss_dssp --ECS--SEEEEEEE-------GGGHHHHHHHHHHHTTTTS
T ss_pred --cCC--ceEEEEEe-------HHHHHHHHHHHHHHhCCCC
Confidence 322 22234452 2234455567777765433
No 48
>3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis}
Probab=91.79 E-value=8.1 Score=38.58 Aligned_cols=123 Identities=15% Similarity=0.248 Sum_probs=72.8
Q ss_pred CCeEEEEEEeC---CCccHHHHHHHHHHHCCceEEEEEEEEcCCeEEEEEEEeecCCCCCCCChHHHHHHHHHHHHhhcc
Q 022552 99 SDATIVQLSFG---DRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFITRLDTGRKVEDPDLLERIRLTIINNLLK 175 (295)
Q Consensus 99 ~~~t~V~V~~~---DrpGLl~~I~~vL~~~glnI~~A~I~T~~~~~~D~F~V~~~~~g~~~~d~~~le~L~~~L~~~L~~ 175 (295)
.+...|.|.+. .+||..+++..+|++.|+||..-. +. +.-+ .|.|.. +..++..+.|.+.+..
T Consensus 353 ~~~a~VsvVG~gm~~~~Gv~a~if~aL~~~~Ini~~is--tS-e~~I-s~vI~~----------~d~~~Av~aLh~~f~~ 418 (600)
T 3l76_A 353 KGIAKIAIAGAGMIGRPGIAAKMFKTLADVGVNIEMIS--TS-EVKV-SCVIDQ----------RDADRAIAALSNAFGV 418 (600)
T ss_dssp CSEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCCCEEE--EC-SSEE-EEEEEG----------GGHHHHHHHHHHHTTC
T ss_pred CCeEEEEEECCCcccCccHHHHHHHHHHhCCCcEEEEe--cC-CCEE-EEEEcH----------HHHHHHHHHHHHhhcc
Confidence 45678888876 799999999999999999997654 22 3222 255543 2223444455554432
Q ss_pred cCCCchhHhhhccccCccCCcccccccccceEEecCCCCceEEEEEE-eCCCcchHHHHHHHHHhCCceEEEEEEE
Q 022552 176 YHPESSEQLAMGEAFGIKAPEKKLDVDIATHIHVKEDGPKRSLLYIE-TADRPGLLVEIMKIIADVNVDVESAEID 250 (295)
Q Consensus 176 ~~~~~~~~La~~~~~~~~~~~r~~~~~~~~~V~i~~~~~~~t~IeV~-a~DRPGLL~dIt~~L~~~gI~I~~A~I~ 250 (295)
+... .. ..... ..-+.-+-|..+. +.+.|.|. .+|+||+.++|-..|++.||+|...--+
T Consensus 419 ~~t~----------~~-~~~~~-~~~~~v~Gia~~~---~~a~i~i~~~~~~~g~~~~if~~La~~~I~vDmI~q~ 479 (600)
T 3l76_A 419 TLSP----------PK-NQTDT-SHLPAVRGVALDQ---DQAQIAIRHVPDRPGMAAQLFTALAEANISVDMIIQS 479 (600)
T ss_dssp CBCC----------CC-CCCC----CCSCCEEEEEC---SEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCEEEEE
T ss_pred cCCC----------cc-ccccc-cccCceEEEEeeC---CEEEEEEecCCCCccHHHHHHHHHHHcCCcEEEEEec
Confidence 1000 00 00000 0001112233222 44566654 5899999999999999999999665444
No 49
>3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum}
Probab=89.51 E-value=1.7 Score=42.03 Aligned_cols=107 Identities=13% Similarity=0.191 Sum_probs=67.7
Q ss_pred CeEEEEEEe---CCCccHHHHHHHHHHHCCceEEEEEEEEcCCeEEEEEEEeecCCCCCCCChHHHHHHHHHHHHhhccc
Q 022552 100 DATIVQLSF---GDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFITRLDTGRKVEDPDLLERIRLTIINNLLKY 176 (295)
Q Consensus 100 ~~t~V~V~~---~DrpGLl~~I~~vL~~~glnI~~A~I~T~~~~~~D~F~V~~~~~g~~~~d~~~le~L~~~L~~~L~~~ 176 (295)
+.+.|+|.+ ++.+|.+++|..+|+++|+||..-. +..... .|.|... +-. ...+.+...|...+.
T Consensus 297 ~~~~i~i~~~~~~~~~g~~~~if~~l~~~~i~vd~i~--~~~~~i--s~~V~~~-d~~-----~~~~~~~~el~~~~~-- 364 (446)
T 3tvi_A 297 NFTVIAIEKALLNSEVGFCRKILSILEMYGVSFEHMP--SGVDSV--SLVIEDC-KLD-----GKCDKIIEEIKKQCN-- 364 (446)
T ss_dssp EEEEEEEECTTGGGSTTHHHHHHHHHHTTTCCEEEBC--EETTEE--EEEEEHH-HHT-----TTHHHHHHHHHHHSC--
T ss_pred CEEEEEEEecCCCccHHHHHHHHHHHHHcCCcEEEEe--cCCCEE--EEEEecc-hHH-----HHHHHHHHHHHHhcC--
Confidence 345677875 6899999999999999999997532 222222 3666542 100 112233333332111
Q ss_pred CCCchhHhhhccccCccCCcccccccccceEEecCCCCceEEEEEEeC---CCcchHHHHHHHHHhCCceEEEEE
Q 022552 177 HPESSEQLAMGEAFGIKAPEKKLDVDIATHIHVKEDGPKRSLLYIETA---DRPGLLVEIMKIIADVNVDVESAE 248 (295)
Q Consensus 177 ~~~~~~~La~~~~~~~~~~~r~~~~~~~~~V~i~~~~~~~t~IeV~a~---DRPGLL~dIt~~L~~~gI~I~~A~ 248 (295)
+ ..|.+.+ +...|.|.+. .+||+..++.++|++.||||....
T Consensus 365 -~--------------------------~~v~v~~---~vA~VSvVG~gM~~~~Gvaarif~aLa~~~InI~mIs 409 (446)
T 3tvi_A 365 -P--------------------------DSIEIHP---NMALVATVGTGMAKTKGIANKIFTALSKENVNIRMID 409 (446)
T ss_dssp -C--------------------------SEEEEEE---EEEEEEEECGGGSSCTTHHHHHHHHHHHTTCCEEEEE
T ss_pred -C--------------------------CcEEEeC---CeEEEEEECCCccCChhHHHHHHHHHHHCCCCEEEEE
Confidence 0 0122221 4578888765 589999999999999999998765
No 50
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=89.11 E-value=1.4 Score=42.31 Aligned_cols=76 Identities=17% Similarity=0.203 Sum_probs=53.1
Q ss_pred hhccchhhhccccccCCCCCCCCCcCcCCCCCcEEEEeecCCCCeEEEEEEeCCCccHHHHHHHHHHHCCceEEEEEEEE
Q 022552 57 RKKNILFASVNGTNAVSPTPLKSDQDADYIPMPHVLIDQDSNSDATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNT 136 (295)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~V~i~~~~~~~~t~V~V~~~DrpGLl~~I~~vL~~~glnI~~A~I~T 136 (295)
++-......+.+...++. .....+++.+..| ...+...|.+.-.|.||.+.+|..+|+++|+||..-...|
T Consensus 308 ~~~~~~~~nl~~~l~~g~--~~~~Vn~p~~~~~-------~~~~~~r~~~~h~n~p~~~~~i~~~~~~~~~ni~~~~~~~ 378 (416)
T 3k5p_A 308 RIGTEVTRKLVEYSDVGS--TVGAVNFPQVQLP-------PRPTGTRFMHVHENRPGILNSLMNVFSHHHINIASQFLQT 378 (416)
T ss_dssp HHHHHHHHHHHHHHHHCC--CTTBSSSCCCCCC-------CCSSSEEEEEEECCCTTHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred HHHHHHHHHHHHHHhhCC--CCceeeCCCcCCC-------CCCCceEEEEEecCCccHHHHHHHHHHHcCCCHHHHhccC
Confidence 333444555555554444 2333455444333 1335689999999999999999999999999999888777
Q ss_pred cCCeE
Q 022552 137 EGSVK 141 (295)
Q Consensus 137 ~~~~~ 141 (295)
.++..
T Consensus 379 ~~~~~ 383 (416)
T 3k5p_A 379 DGEVG 383 (416)
T ss_dssp CSSCE
T ss_pred CCceE
Confidence 77765
No 51
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=87.56 E-value=2.3 Score=41.76 Aligned_cols=49 Identities=14% Similarity=0.214 Sum_probs=39.7
Q ss_pred CCeEEEEEEeCCCccHHHHHHHHHHHCCceEEEEEEEEcCC--eEEEEEEE
Q 022552 99 SDATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGS--VKQTKFFI 147 (295)
Q Consensus 99 ~~~t~V~V~~~DrpGLl~~I~~vL~~~glnI~~A~I~T~~~--~~~D~F~V 147 (295)
..+..+.+.-+|+||.+..++..|.++|+||...++..... ..+-.+.+
T Consensus 452 ~~~~~l~v~~~D~PG~I~~v~~~Lg~~~INIa~m~v~r~~~~~~a~~~i~v 502 (529)
T 1ygy_A 452 AQGINLIIHYVDRPGALGKIGTLLGTAGVNIQAAQLSEDAEGPGATILLRL 502 (529)
T ss_dssp SCSEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEECSSSSCEEEEEEE
T ss_pred CCccEEEEEcCCCCchHHHHHHHHHhcCCCeeeEEEecCCCCCEEEEEEEE
Confidence 44668889999999999999999999999999999988643 23433444
No 52
>1phz_A Protein (phenylalanine hydroxylase); aromatic amino acid hydroxylase, phosphorylation, intrasteric regulation, allosteric regulation; 2.20A {Rattus norvegicus} SCOP: d.58.18.3 d.178.1.1 PDB: 2phm_A
Probab=86.74 E-value=1 Score=43.39 Aligned_cols=69 Identities=10% Similarity=0.182 Sum_probs=50.8
Q ss_pred CceEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEecC-CeeeeEEEEEeCCCCCChHHHHHHHHHHHHH
Q 022552 214 PKRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEG-LVAKDKFHVSYGGAALNSSLSQVLVNCLRYY 284 (295)
Q Consensus 214 ~~~t~IeV~a~DRPGLL~dIt~~L~~~gI~I~~A~I~T~g-~~a~D~F~V~~~G~~l~~~~~~~L~~~L~~~ 284 (295)
.+.|.|-+..+|+||-|+++-..|+.+|||+.+.+..-.. ..-+=.|||.-+ ...++..+++.+.|+..
T Consensus 32 ~dKTSLiFsl~n~pGAL~~~L~~Fa~~gINLTkIESRPsk~~~~eY~FfVD~e--h~~d~~v~~AL~eL~~~ 101 (429)
T 1phz_A 32 NGAISLIFSLKEEVGALAKVLRLFEENDINLTHIESRPSRLNKDEYEFFTYLD--KRTKPVLGSIIKSLRND 101 (429)
T ss_dssp SCCEEEEEEEECCTTHHHHHHHHHHTTTCCTTSEEEEECSSCTTEEEEEECBC--GGGHHHHHHHHHHHHHT
T ss_pred CCeEEEEEEeCCCccHHHHHHHHHHHcCCceEEEEeeecCCCCccEEEEEEEe--eCCCHHHHHHHHHHHhh
Confidence 4568888888999999999999999999999999987554 445667888435 33444455555555544
No 53
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=86.44 E-value=1.8 Score=41.42 Aligned_cols=48 Identities=19% Similarity=0.361 Sum_probs=44.0
Q ss_pred ceEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEecCCeeeeEEEE
Q 022552 215 KRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHV 262 (295)
Q Consensus 215 ~~t~IeV~a~DRPGLL~dIt~~L~~~gI~I~~A~I~T~g~~a~D~F~V 262 (295)
..+.|.+.-.|+||.|.+|+.+|+++|+||......|.|+.+.-+..+
T Consensus 342 ~~~r~~~~h~n~p~~~~~i~~~~~~~~~ni~~~~~~~~~~~~y~~~d~ 389 (416)
T 3k5p_A 342 TGTRFMHVHENRPGILNSLMNVFSHHHINIASQFLQTDGEVGYLVMEA 389 (416)
T ss_dssp SSEEEEEEECCCTTHHHHHHHHHHHTTCCEEEEEEEECSSCEEEEEEE
T ss_pred CceEEEEEecCCccHHHHHHHHHHHcCCCHHHHhccCCCceEEEEEEe
Confidence 468999999999999999999999999999999999999988776666
No 54
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=86.13 E-value=0.72 Score=44.65 Aligned_cols=35 Identities=29% Similarity=0.566 Sum_probs=30.9
Q ss_pred ceEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEE
Q 022552 215 KRSLLYIETADRPGLLVEIMKIIADVNVDVESAEI 249 (295)
Q Consensus 215 ~~t~IeV~a~DRPGLL~dIt~~L~~~gI~I~~A~I 249 (295)
..|-+.+...|+||.|.+|+.+|.++||+|.+..=
T Consensus 358 ~~yy~r~~~~d~~gvl~~i~~~~~~~~isi~~~~q 392 (444)
T 3mtj_A 358 TAYYLRLRAFDRPGVLADITRILADSSISIDAMVQ 392 (444)
T ss_dssp EEEEEEEEEC-CCHHHHHHHHHHHHTTCCEEEEEE
T ss_pred eeeEEEEEecCcccHHHHHHHHHHhcCCceeEEee
Confidence 47888999999999999999999999999998754
No 55
>2qmx_A Prephenate dehydratase; APC86053, L-Phe inhibition, PDT, CHL tepidum TLS, structural genomics, PSI-2, protein structure initiative; HET: PHE; 2.30A {Chlorobium tepidum tls}
Probab=84.41 E-value=3.9 Score=37.08 Aligned_cols=64 Identities=17% Similarity=0.315 Sum_probs=46.2
Q ss_pred eEEEEEEeCCCccHHHHHHHHHHHCCceEEEEEEEEcCCeE-EEEEEEeecCCCCCCCChHHHHHHHHHHHH
Q 022552 101 ATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVK-QTKFFITRLDTGRKVEDPDLLERIRLTIIN 171 (295)
Q Consensus 101 ~t~V~V~~~DrpGLl~~I~~vL~~~glnI~~A~I~T~~~~~-~D~F~V~~~~~g~~~~d~~~le~L~~~L~~ 171 (295)
.|.|.+..+|+||-|+++.+.|+.+|+|+..-.-.-.+++. .-.|+|.- +|.. .+ +.++..|.+
T Consensus 200 ktsl~f~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfvD~--eg~~-~d----~~v~~aL~~ 264 (283)
T 2qmx_A 200 KTSIVFALPNEQGSLFRALATFALRGIDLTKIESRPSRKKAFEYLFYADF--IGHR-ED----QNVHNALEN 264 (283)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTEEEEEEEE--ESCT-TS----HHHHHHHHH
T ss_pred eEEEEEEcCCCCchHHHHHHHHHHcCCCeeEEEeeEcCCCCcceEEEEEE--ecCC-Cc----HHHHHHHHH
Confidence 45666667899999999999999999999887777666542 44588876 5653 33 344455544
No 56
>2re1_A Aspartokinase, alpha and beta subunits; structural genomics, protein structure initiative, midwest center for structural genomics; 2.75A {Neisseria meningitidis MC58}
Probab=83.86 E-value=0.8 Score=37.87 Aligned_cols=48 Identities=21% Similarity=0.392 Sum_probs=35.3
Q ss_pred ceEEEEEE-eCCCcchHHHHHHHHHhCCceEEEEEEEec-CCeeeeEEEE
Q 022552 215 KRSLLYIE-TADRPGLLVEIMKIIADVNVDVESAEIDTE-GLVAKDKFHV 262 (295)
Q Consensus 215 ~~t~IeV~-a~DRPGLL~dIt~~L~~~gI~I~~A~I~T~-g~~a~D~F~V 262 (295)
+.+.|.|. ..|+||.+++|.++|+++||+|.....+.. ++...=.|.|
T Consensus 24 ~~~~i~v~~~~~~~G~~~~if~~La~~~Invd~i~~s~~~~g~~~isf~v 73 (167)
T 2re1_A 24 NQARINVRGVPDKPGVAYQILGAVADANIEVDMIIQNVGSEGTTDFSFTV 73 (167)
T ss_dssp CCEEEEEEEEECCTTHHHHHHHHHHTTTCCCCCEEEC----CEEEEEEEE
T ss_pred CEEEEEEecCCCCcCHHHHHHHHHHHcCCeEEEEEcCCCCCCeeEEEEEE
Confidence 45788888 489999999999999999999988765432 2222334666
No 57
>2dt9_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; 2.15A {Thermus thermophilus} PDB: 2zho_A
Probab=83.55 E-value=0.95 Score=37.35 Aligned_cols=50 Identities=14% Similarity=0.240 Sum_probs=36.6
Q ss_pred ceEEEEEEe-CCCcchHHHHHHHHHhCCceEEEEEEEec---CCeeeeEEEEEe
Q 022552 215 KRSLLYIET-ADRPGLLVEIMKIIADVNVDVESAEIDTE---GLVAKDKFHVSY 264 (295)
Q Consensus 215 ~~t~IeV~a-~DRPGLL~dIt~~L~~~gI~I~~A~I~T~---g~~a~D~F~V~~ 264 (295)
+.+.|.|.+ +|+||.+++|.++|++.||+|.....+.. .+...=.|.|..
T Consensus 15 ~~a~Itv~g~~~~~G~~a~if~~La~~~InVd~I~q~~~~~~~g~~~isf~V~~ 68 (167)
T 2dt9_A 15 DHAQIGLIGIPDQPGIAAKVFQALAERGIAVDMIIQGVPGHDPSRQQMAFTVKK 68 (167)
T ss_dssp SEEEEEEEEEECSTTHHHHHHHHHHHHTCCCSCEEBCCCCSCTTEEEEEEEEEG
T ss_pred CEEEEEEecCCCCCCHHHHHHHHHHHcCCcEEEEEcCCCCCCCCceEEEEEEeh
Confidence 457777776 79999999999999999999988654321 123344577743
No 58
>2dtj_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; HET: CIT; 1.58A {Corynebacterium glutamicum} PDB: 3aaw_B* 3ab2_B 3ab4_B*
Probab=82.51 E-value=2.7 Score=35.03 Aligned_cols=38 Identities=13% Similarity=0.388 Sum_probs=32.3
Q ss_pred ceEEEEEE-eCCCcchHHHHHHHHHhCCceEEEEEEEec
Q 022552 215 KRSLLYIE-TADRPGLLVEIMKIIADVNVDVESAEIDTE 252 (295)
Q Consensus 215 ~~t~IeV~-a~DRPGLL~dIt~~L~~~gI~I~~A~I~T~ 252 (295)
+.+.|+|. ..|+||.+++|.+.|++.||+|.....++.
T Consensus 14 ~~~~Itv~~~~~~~G~~a~if~~La~~~InId~i~~s~~ 52 (178)
T 2dtj_A 14 SEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVS 52 (178)
T ss_dssp SEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCEEEECCC
T ss_pred CEEEEEEecCCCCccHHHHHHHHHHHcCCCEEEEEcCCC
Confidence 45777774 689999999999999999999998876654
No 59
>2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, alloste S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10
Probab=81.08 E-value=4.5 Score=39.66 Aligned_cols=120 Identities=14% Similarity=0.214 Sum_probs=72.3
Q ss_pred CeEEEEEEe---CCCccHHHHHHHHHHHCCceEEEEEEEEcCCeEEEEEEEeecCCCCCCC-ChHHHHHHHHHHHHhhcc
Q 022552 100 DATIVQLSF---GDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFITRLDTGRKVE-DPDLLERIRLTIINNLLK 175 (295)
Q Consensus 100 ~~t~V~V~~---~DrpGLl~~I~~vL~~~glnI~~A~I~T~~~~~~D~F~V~~~~~g~~~~-d~~~le~L~~~L~~~L~~ 175 (295)
+.+.|+|.+ .+++|.+++|..+|+++|+||..-. +....+ .|.|... +..... .. +.++. +.+.+..
T Consensus 340 ~~~~I~i~~~~m~~~~g~~~~if~~la~~~I~vd~I~--sse~si--s~~v~~~-~~~~~~~~~---~~l~~-~~~el~~ 410 (510)
T 2cdq_A 340 NVTMLDIASTRMLGQVGFLAKVFSIFEELGISVDVVA--TSEVSI--SLTLDPS-KLWSRELIQ---QELDH-VVEELEK 410 (510)
T ss_dssp EEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCEEEEE--EETTEE--EEEECCG-GGSSSCCCH---HHHHH-HHHHHTT
T ss_pred CeEEEEEEcCCCCCcccHHHHHHHHHHHcCCcEEEEE--eCCCeE--EEEEech-HhhhhhHHH---HHHHH-HHHHhCC
Confidence 567788885 7899999999999999999998762 222222 3666542 111100 01 11111 1111210
Q ss_pred cCCCchhHhhhccccCccCCcccccccccceEEecCCCCceEEEEEEeC--CCcchHHHHHHHHHhCCceEEEEEEEecC
Q 022552 176 YHPESSEQLAMGEAFGIKAPEKKLDVDIATHIHVKEDGPKRSLLYIETA--DRPGLLVEIMKIIADVNVDVESAEIDTEG 253 (295)
Q Consensus 176 ~~~~~~~~La~~~~~~~~~~~r~~~~~~~~~V~i~~~~~~~t~IeV~a~--DRPGLL~dIt~~L~~~gI~I~~A~I~T~g 253 (295)
. ..|.+.+ +...|.|.+. .+||+..++.++|++.||||.... .|
T Consensus 411 --~--------------------------~~v~~~~---~~a~VsiVG~m~~~~Gvaa~~f~aL~~~~InI~mIs---qG 456 (510)
T 2cdq_A 411 --I--------------------------AVVNLLK---GRAIISLIGNVQHSSLILERAFHVLYTKGVNVQMIS---QG 456 (510)
T ss_dssp --T--------------------------SEEEEEE---EEEEEEEEECGGGHHHHHHHHHHHHHHHTCCCSEEE---EC
T ss_pred --C--------------------------CeEEEeC---CcEEEEEEEECCCChhHHHHHHHHHHHCCCCEEEEE---ec
Confidence 0 0122221 4567777776 889999999999999999998763 34
Q ss_pred Ce-eeeEEEE
Q 022552 254 LV-AKDKFHV 262 (295)
Q Consensus 254 ~~-a~D~F~V 262 (295)
.. ..=.|.|
T Consensus 457 sSei~Is~vV 466 (510)
T 2cdq_A 457 ASKVNISFIV 466 (510)
T ss_dssp TTCSEEEEEE
T ss_pred CCcceEEEEE
Confidence 33 2334666
No 60
>3luy_A Probable chorismate mutase; structural genomics, APC38059, 3-phenylp PSI-2, protein structure initiative; HET: PPY; 2.00A {Bifidobacterium adolescentis}
Probab=79.93 E-value=18 Score=33.37 Aligned_cols=53 Identities=15% Similarity=0.171 Sum_probs=39.6
Q ss_pred eEEEEEEeC--CCccHHHHHHHHHHHCCceEEEEEEEEcCCeE-EEEEEEeecCCCCC
Q 022552 101 ATIVQLSFG--DRLGALIDTMNALKDLGLDVAKGTVNTEGSVK-QTKFFITRLDTGRK 155 (295)
Q Consensus 101 ~t~V~V~~~--DrpGLl~~I~~vL~~~glnI~~A~I~T~~~~~-~D~F~V~~~~~g~~ 155 (295)
.+.+.+..+ |+||-|+++.+.|+.+|+|...-.-.-.+++. .-.|+|.- +|..
T Consensus 206 kts~i~~~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfiD~--eg~~ 261 (329)
T 3luy_A 206 YESVLTLIPLVTGPGVLANLLDVFRDAGLNMTSFISRPIKGRTGTYSFIVTL--DAAP 261 (329)
T ss_dssp EEEEEEEECSCCSTTHHHHHHHHHHHTTCCEEEEEEEEETTEEEEEEEEEEE--SSCT
T ss_pred ceEEEEEecCCCCCCHHHHHHHHHHHCCcceEEEEeeECCCCCccEEEEEEE--eCCc
Confidence 344444444 79999999999999999999887777776654 45688876 5763
No 61
>3mwb_A Prephenate dehydratase; L-Phe, PSI, MCSG, structural genomics, midwest center for ST genomics, protein structure initiative, lyase; HET: MSE PHE; 2.00A {Arthrobacter aurescens}
Probab=79.74 E-value=6.7 Score=36.10 Aligned_cols=53 Identities=23% Similarity=0.387 Sum_probs=40.4
Q ss_pred CeEEEEEEeC-CCccHHHHHHHHHHHCCceEEEEEEEEcCCeE-EEEEEEeecCCCC
Q 022552 100 DATIVQLSFG-DRLGALIDTMNALKDLGLDVAKGTVNTEGSVK-QTKFFITRLDTGR 154 (295)
Q Consensus 100 ~~t~V~V~~~-DrpGLl~~I~~vL~~~glnI~~A~I~T~~~~~-~D~F~V~~~~~g~ 154 (295)
..|.|.+..+ |+||-|+++.+.|+.+|+|...-.-.-.+++. .-.|+|.- +|.
T Consensus 200 ~kTSl~f~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfiD~--eg~ 254 (313)
T 3mwb_A 200 DKTTVVVPLPEDHPGALMEILDQFASRGVNLSRIESRPTGQYLGHYFFSIDA--DGH 254 (313)
T ss_dssp EEEEEEEECSSCCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTSEEEEEEE--ESC
T ss_pred CeEEEEEEeCCCCCCHHHHHHHHHHHCCccEEEEEEeecCCCCccEEEEEEE--eCC
Confidence 4567777776 99999999999999999999876666655532 23488876 565
No 62
>3mah_A Aspartokinase; aspartate kinase, structural genomics, MCSG, transferase, PSI-2; 2.31A {Porphyromonas gingivalis}
Probab=76.05 E-value=2.4 Score=34.51 Aligned_cols=99 Identities=13% Similarity=0.072 Sum_probs=59.9
Q ss_pred CeEEEEEEe---CCCccHHHHHHHHHHHCCceEEEEEEEEcCCeEEEEEEEeecCCCCCCCChHHHHHHHHHHHHhhccc
Q 022552 100 DATIVQLSF---GDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFITRLDTGRKVEDPDLLERIRLTIINNLLKY 176 (295)
Q Consensus 100 ~~t~V~V~~---~DrpGLl~~I~~vL~~~glnI~~A~I~T~~~~~~D~F~V~~~~~g~~~~d~~~le~L~~~L~~~L~~~ 176 (295)
+.+.|+|.+ +++||..+++...|+++|+||..-. +..... .|.|.+. +++++ .|++ |..
T Consensus 17 ~va~Iti~~~~m~~~~g~~~~if~~La~~~I~vd~I~--~s~~~I--sf~v~~~---------~~~~~---il~~-l~~- 78 (157)
T 3mah_A 17 GITVIKVKSSNKLLSWHFMRKLFEIFEFYQEPVDMVA--TSEVGV--SLTIDND---------KNLPD---IVRA-LSD- 78 (157)
T ss_dssp EEEEEEEEECTTSCHHHHHHHHHHHHHHTTCCCSCEE--CCSSEE--EEEESCC---------TTHHH---HHHH-HTT-
T ss_pred CEEEEEEEeCCCCCchhHHHHHHHHHHHcCCCEEEEE--ecCCEE--EEEECCh---------HHHHH---HHHH-Hhc-
Confidence 456778774 5789999999999999999996433 222222 3666431 11222 2222 211
Q ss_pred CCCchhHhhhccccCccCCcccccccccceEEecCCCCceEEEEEEeC---CCcchHHHHHHHHHhCCceEEEEE
Q 022552 177 HPESSEQLAMGEAFGIKAPEKKLDVDIATHIHVKEDGPKRSLLYIETA---DRPGLLVEIMKIIADVNVDVESAE 248 (295)
Q Consensus 177 ~~~~~~~La~~~~~~~~~~~r~~~~~~~~~V~i~~~~~~~t~IeV~a~---DRPGLL~dIt~~L~~~gI~I~~A~ 248 (295)
. ..|.+.+ +...+.|.+. ++||+..++..+|+ |++|....
T Consensus 79 -~--------------------------~~v~~~~---~~a~vsvvG~gm~~~~gv~a~~f~aL~--~Ini~~is 121 (157)
T 3mah_A 79 -I--------------------------GDVTVDK---DMVIICIVGDMEWDNVGFEARIINALK--GVPVRMIS 121 (157)
T ss_dssp -T--------------------------EEEEEEE---EEEEEEEEC------CCHHHHHHHTTT--TSCCSEEE
T ss_pred -c--------------------------CeEEEeC---CeEEEEEECCCcccCccHHHHHHHHhC--CCCeEEEe
Confidence 0 0122211 4467777764 68999999999999 89887754
No 63
>3s1t_A Aspartokinase; ACT domain, threonine binding, regulatory domain of aspartok transferase; 1.63A {Mycobacterium tuberculosis}
Probab=73.86 E-value=4.3 Score=34.04 Aligned_cols=50 Identities=18% Similarity=0.302 Sum_probs=35.7
Q ss_pred ceEEEEEE-eCCCcchHHHHHHHHHhCCceEEEEEEE-ec--CCeeeeEEEEEe
Q 022552 215 KRSLLYIE-TADRPGLLVEIMKIIADVNVDVESAEID-TE--GLVAKDKFHVSY 264 (295)
Q Consensus 215 ~~t~IeV~-a~DRPGLL~dIt~~L~~~gI~I~~A~I~-T~--g~~a~D~F~V~~ 264 (295)
+.+.|+|. .+|+||++++|..+|+++||+|....-+ +. .+...-.|.+..
T Consensus 15 ~~~~Iti~~~~~~~G~~a~If~~La~~~I~vd~I~q~~s~~~~g~~~isftv~~ 68 (181)
T 3s1t_A 15 SEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCSR 68 (181)
T ss_dssp SEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCCEEECCCCTTTCEEEEEEEEET
T ss_pred CEEEEEEecCCCCcCHHHHHHHHHHHcCCcEEEEEecCCcccCCccEEEEEEeh
Confidence 34555553 5799999999999999999999876543 22 334455677743
No 64
>4go7_X Aspartokinase; transferase; 2.00A {Mycobacterium tuberculosis} PDB: 4go5_X
Probab=73.33 E-value=2.8 Score=36.08 Aligned_cols=49 Identities=18% Similarity=0.289 Sum_probs=35.9
Q ss_pred ceEEEEEE-eCCCcchHHHHHHHHHhCCceEEEEEEEe--c-CCeeeeEEEEE
Q 022552 215 KRSLLYIE-TADRPGLLVEIMKIIADVNVDVESAEIDT--E-GLVAKDKFHVS 263 (295)
Q Consensus 215 ~~t~IeV~-a~DRPGLL~dIt~~L~~~gI~I~~A~I~T--~-g~~a~D~F~V~ 263 (295)
+.+.|+|. .+|+||++++|-.+|++.||||...--+. . .....-.|.+.
T Consensus 34 ~~a~Iti~g~~~~pG~aa~IF~~La~~~InVDmI~Qs~s~~~~~~~~~sftv~ 86 (200)
T 4go7_X 34 SEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCS 86 (200)
T ss_dssp SEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCCEECCCCC--CCEEEEEEEEE
T ss_pred CEEEEEEecCCCCccHHHHHHHHHHHhCcceEEEeeccccccccceEEEEecc
Confidence 45666665 57999999999999999999998865332 1 23455567774
No 65
>2qmw_A PDT, prephenate dehydratase; APC85812, prephenate dehydratase (PDT), staphylococcus aureu aureus MU50, structural genomics, PSI-2; 2.30A {Staphylococcus aureus subsp} SCOP: c.94.1.1 d.58.18.3
Probab=72.91 E-value=16 Score=32.69 Aligned_cols=50 Identities=16% Similarity=0.245 Sum_probs=38.4
Q ss_pred CeEEEEEEe---CCCccHHHHHHHHHHHCCceEEEEEEEEcCCeE-EEEEEEee
Q 022552 100 DATIVQLSF---GDRLGALIDTMNALKDLGLDVAKGTVNTEGSVK-QTKFFITR 149 (295)
Q Consensus 100 ~~t~V~V~~---~DrpGLl~~I~~vL~~~glnI~~A~I~T~~~~~-~D~F~V~~ 149 (295)
..|.|.+.. +|+||-|+++.+.|+.+|+|+..-.-.-.+++. .-.|+|.-
T Consensus 185 ~ktsl~f~~~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfiD~ 238 (267)
T 2qmw_A 185 NATSLMFLITPMHDKPGLLASVLNTFALFNINLSWIESRPLKTQLGMYRFFVQA 238 (267)
T ss_dssp SCSEEEEEEEESSCCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTCEEEEEEE
T ss_pred CeEEEEEEcCCCCCCcChHHHHHHHHHHcCCCeeEEEEeecCCCCccEEEEEEE
Confidence 345555666 899999999999999999999887777666532 34588865
No 66
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=64.56 E-value=16 Score=35.18 Aligned_cols=50 Identities=20% Similarity=0.218 Sum_probs=35.1
Q ss_pred CeEEEEEEeCCCccHHHHHHHHHHHCCceEEEEEEEEcC--CeEEEEEEEee
Q 022552 100 DATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEG--SVKQTKFFITR 149 (295)
Q Consensus 100 ~~t~V~V~~~DrpGLl~~I~~vL~~~glnI~~A~I~T~~--~~~~D~F~V~~ 149 (295)
...-+.+...|+||.+++|+++|.++|++|.+....... +.......++.
T Consensus 358 ~~yy~r~~~~d~~gvl~~i~~~~~~~~isi~~~~q~~~~~~~~~~~~v~~th 409 (444)
T 3mtj_A 358 TAYYLRLRAFDRPGVLADITRILADSSISIDAMVQKEPAEGEEQVDIILLTH 409 (444)
T ss_dssp EEEEEEEEEC-CCHHHHHHHHHHHHTTCCEEEEEECC------CEEEEEEEC
T ss_pred eeeEEEEEecCcccHHHHHHHHHHhcCCceeEEeecccccCCCCceEEEEec
Confidence 455778889999999999999999999999876553221 12244555665
No 67
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=56.30 E-value=25 Score=33.15 Aligned_cols=49 Identities=12% Similarity=0.275 Sum_probs=37.1
Q ss_pred ceEEEEEE-eCCCcchHHHHHHHHHhCCceEEEEEEEec---CCeeeeEEEEE
Q 022552 215 KRSLLYIE-TADRPGLLVEIMKIIADVNVDVESAEIDTE---GLVAKDKFHVS 263 (295)
Q Consensus 215 ~~t~IeV~-a~DRPGLL~dIt~~L~~~gI~I~~A~I~T~---g~~a~D~F~V~ 263 (295)
+.+.|+|. ..|+||.+++|.+.|+++||+|.....+|. .+...=.|.|.
T Consensus 263 ~~~~i~v~~~~~~~g~~~~If~~La~~~I~vd~I~q~~s~~~~g~~~isf~v~ 315 (421)
T 3ab4_A 263 SEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVFSVEDGTTDITFTCP 315 (421)
T ss_dssp SEEEEEEEEEESSTTHHHHHHHHHHHTTCCCEEEEECCCC--CCEEEEEEEEE
T ss_pred CEEEEEEeccCCcccHHHHHHHHHHHcCCcEEEEEccCccccCCcceEEEEEe
Confidence 45778887 689999999999999999999998865442 22334446664
No 68
>1phz_A Protein (phenylalanine hydroxylase); aromatic amino acid hydroxylase, phosphorylation, intrasteric regulation, allosteric regulation; 2.20A {Rattus norvegicus} SCOP: d.58.18.3 d.178.1.1 PDB: 2phm_A
Probab=47.80 E-value=31 Score=33.05 Aligned_cols=51 Identities=16% Similarity=0.261 Sum_probs=38.1
Q ss_pred CCeEEEEEEeCCCccHHHHHHHHHHHCCceEEEEEEEEcCCeE-EEEEEEee
Q 022552 99 SDATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVK-QTKFFITR 149 (295)
Q Consensus 99 ~~~t~V~V~~~DrpGLl~~I~~vL~~~glnI~~A~I~T~~~~~-~D~F~V~~ 149 (295)
...|.|.+..+|+||-|+++.+.|+.+|+|+..-.-.-.+... .-.|+|.-
T Consensus 32 ~dKTSLiFsl~n~pGAL~~~L~~Fa~~gINLTkIESRPsk~~~~eY~FfVD~ 83 (429)
T 1phz_A 32 NGAISLIFSLKEEVGALAKVLRLFEENDINLTHIESRPSRLNKDEYEFFTYL 83 (429)
T ss_dssp SCCEEEEEEEECCTTHHHHHHHHHHTTTCCTTSEEEEECSSCTTEEEEEECB
T ss_pred CCeEEEEEEeCCCccHHHHHHHHHHHcCCceEEEEeeecCCCCccEEEEEEE
Confidence 3456666777999999999999999999999866655554432 33487854
No 69
>3mah_A Aspartokinase; aspartate kinase, structural genomics, MCSG, transferase, PSI-2; 2.31A {Porphyromonas gingivalis}
Probab=44.30 E-value=15 Score=29.54 Aligned_cols=34 Identities=6% Similarity=0.065 Sum_probs=28.7
Q ss_pred ceEEEEEEe---CCCcchHHHHHHHHHhCCceEEEEE
Q 022552 215 KRSLLYIET---ADRPGLLVEIMKIIADVNVDVESAE 248 (295)
Q Consensus 215 ~~t~IeV~a---~DRPGLL~dIt~~L~~~gI~I~~A~ 248 (295)
+.+.|+|.+ +|+||.+++|-.+|+++||+|....
T Consensus 17 ~va~Iti~~~~m~~~~g~~~~if~~La~~~I~vd~I~ 53 (157)
T 3mah_A 17 GITVIKVKSSNKLLSWHFMRKLFEIFEFYQEPVDMVA 53 (157)
T ss_dssp EEEEEEEEECTTSCHHHHHHHHHHHHHHTTCCCSCEE
T ss_pred CEEEEEEEeCCCCCchhHHHHHHHHHHHcCCCEEEEE
Confidence 457788774 5889999999999999999997665
No 70
>4esb_A Transcriptional regulator, PADR family; DNA binding protein, HTH fold; 2.50A {Bacillus cereus}
Probab=36.99 E-value=35 Score=26.11 Aligned_cols=66 Identities=6% Similarity=-0.008 Sum_probs=44.2
Q ss_pred CcchHHHHHHHHHhCCceEEEEEEEecCCeeeeEEEEEeCCCCCChH---HHHHHHHHHHHHcCCCCCcc
Q 022552 226 RPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVSYGGAALNSS---LSQVLVNCLRYYLRRPETDI 292 (295)
Q Consensus 226 RPGLL~dIt~~L~~~gI~I~~A~I~T~g~~a~D~F~V~~~G~~l~~~---~~~~L~~~L~~~L~~~~~~~ 292 (295)
.+|-||.+-+-|.+.|+=... .....+++..-.|.+++.|...-.. ..+.+.+.+...+....+++
T Consensus 41 s~gtlY~~L~rLe~~GlI~~~-~~~~~~g~~rk~Y~LT~~G~~~l~~~~~~~~~~~~~i~~il~~~~~~~ 109 (115)
T 4esb_A 41 SEGSIYPLLLRMQKEKLIEGT-LKASSLGPKRKYYHITDKGLEQLEEFKQSWGMVSTTVNNLLQGESRWS 109 (115)
T ss_dssp CHHHHHHHHHHHHHTTSEEEE-EEECTTSCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHTTCC----
T ss_pred CcChHHHHHHHHHHCCCeEEE-eeecCCCCCcEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Confidence 389999999999999984333 3333455666667788878765544 45677777778887665553
No 71
>1rwu_A Hypothetical UPF0250 protein YBED; mixed alpha-beta fold, structural genomics, protein structure initiative, PSI; NMR {Escherichia coli} SCOP: d.58.54.1
Probab=32.22 E-value=1.7e+02 Score=22.39 Aligned_cols=64 Identities=6% Similarity=-0.042 Sum_probs=43.1
Q ss_pred CCeEEEEEEeCCCccHHHHHHHHHHHC---CceEEEEEEEEcCCeEEEEEEEeecCCCCCCCChHHHHHHHHHHH
Q 022552 99 SDATIVQLSFGDRLGALIDTMNALKDL---GLDVAKGTVNTEGSVKQTKFFITRLDTGRKVEDPDLLERIRLTII 170 (295)
Q Consensus 99 ~~~t~V~V~~~DrpGLl~~I~~vL~~~---glnI~~A~I~T~~~~~~D~F~V~~~~~g~~~~d~~~le~L~~~L~ 170 (295)
+..+.+.|.+.+.+++...|..++..+ +.++ .-+-+..|.+.- +.|+-. +.+++++..|-+.|.
T Consensus 34 Pc~y~~KvIG~a~~~~~~~V~~vv~~~~p~d~~~-~~r~Ss~GkY~S--vtv~v~-----v~S~eQv~aiY~~L~ 100 (109)
T 1rwu_A 34 PTPFTYKVMGQALPELVDQVVEVVQRHAPGDYTP-TVKPSSKGNYHS--VSITIN-----ATHIEQVETLYEELG 100 (109)
T ss_dssp CCCEEEEEEEECCTTHHHHHHHHHHHHSSSCCCE-EEEESSCSSEEE--EEEEEC-----CSSHHHHHHHHHHHS
T ss_pred CCCceEEEEEECcHHHHHHHHHHHHHhCCCCCCc-eecCCCCCeEEE--EEEEEE-----ECCHHHHHHHHHHHh
Confidence 456889999999999999999999988 7777 345444444443 334331 334566666655543
No 72
>3c1m_A Probable aspartokinase; allosteric inhibition, threonine-sensitive, ACT DOMA amino-acid biosynthesis, threonine biosynthesis; HET: ANP; 2.30A {Methanocaldococcus jannaschii} PDB: 3c1n_A 3c20_A 2hmf_A*
Probab=31.22 E-value=45 Score=31.96 Aligned_cols=48 Identities=19% Similarity=0.153 Sum_probs=36.7
Q ss_pred ceEEEEEEe---CCCcchHHHHHHHHHhCCceEEEEEEEecCCeeeeEEEEEe
Q 022552 215 KRSLLYIET---ADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVSY 264 (295)
Q Consensus 215 ~~t~IeV~a---~DRPGLL~dIt~~L~~~gI~I~~A~I~T~g~~a~D~F~V~~ 264 (295)
+.+.|.|.+ .++||++++|.++|+++||+|....-.|. + ..=.|.|.+
T Consensus 317 ~~a~Isv~g~~m~~~~G~~a~if~~La~~~InV~~IsQ~ts-e-~~Is~~V~~ 367 (473)
T 3c1m_A 317 NVALINIFGAGMVGVSGTAARIFKALGEEEVNVILISQGSS-E-TNISLVVSE 367 (473)
T ss_dssp EEEEEEEEECSSSCHHHHHHHHHHHHHHTTCCEEEEEECCT-T-CCEEEEEEG
T ss_pred CeEEEEEecCCCCCCcCHHHHHHHHHHHcCCcEEEEEecCC-C-CEEEEEEec
Confidence 468888886 68899999999999999999988876442 2 233466643
No 73
>1tdj_A Biosynthetic threonine deaminase; allostery, cooperative, tetramer, regulation, pyridoxal PHOS isoleucine biosynthesis; HET: PLP; 2.80A {Escherichia coli} SCOP: c.79.1.1 d.58.18.2 d.58.18.2
Probab=31.01 E-value=2e+02 Score=27.98 Aligned_cols=134 Identities=12% Similarity=0.141 Sum_probs=74.8
Q ss_pred eEEEEEEeCCCccHHHHHHHHHHHCCceEEEEEEEEcCCeEEEEEEEeecCCCCCCCChHHHHHHHHHHHHhhcccCCCc
Q 022552 101 ATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFITRLDTGRKVEDPDLLERIRLTIINNLLKYHPES 180 (295)
Q Consensus 101 ~t~V~V~~~DrpGLl~~I~~vL~~~glnI~~A~I~T~~~~~~D~F~V~~~~~g~~~~d~~~le~L~~~L~~~L~~~~~~~ 180 (295)
...+.|.-+||||-|.+++.+|. +-||.+-.-.........++..... .+. ++..+.|...|++. + ...
T Consensus 338 ~~~~~v~~p~~pg~l~~~~~~l~--~~~i~~~~~~~~~~~~~~~~~~~e~-~~~----~~~~~~~~~~l~~~--g--~~~ 406 (514)
T 1tdj_A 338 EALLAVTIPEEKGSFLKFCQLLG--GRSVTEFNYRFADAKNACIFVGVRL-SRG----LEERKEILQMLNDG--G--YSV 406 (514)
T ss_dssp EEEEEEECCBSSSCSHHHHHTTS--SSEEEEEEEECCCSSBCEEEEEEEC-SST----HHHHHHHHHHHTSS--S--CEE
T ss_pred cccccccCCCCCchHHHHHHHhC--CCceEEEEeeccCCCeEEEEEEEEe-CCc----HHHHHHHHHHHHhC--C--CCe
Confidence 35678899999999999999987 7888865543222222333443332 121 46667777766542 1 110
Q ss_pred hhHhhhccccCccCCcccccccccceEEecCCCCceEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEecCCe
Q 022552 181 SEQLAMGEAFGIKAPEKKLDVDIATHIHVKEDGPKRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLV 255 (295)
Q Consensus 181 ~~~La~~~~~~~~~~~r~~~~~~~~~V~i~~~~~~~t~IeV~a~DRPGLL~dIt~~L~~~gI~I~~A~I~T~g~~ 255 (295)
..|...+..+.+ ..+ -+..+ .+...+.-+....=+.|||-|.+.-..|.. +-||.-.+-...|..
T Consensus 407 -~~~~~~~~~~~h----~~~-~~g~~---~~~~~~e~~~~~~fpe~~gal~~fl~~~~~-~~~i~~~~yr~~g~~ 471 (514)
T 1tdj_A 407 -VDLSDDEMAKLH----VRY-MVGGR---PSHPLQERLYSFEFPESPGALLRFLNTLGT-YWNISLFHYRSHGTD 471 (514)
T ss_dssp -ETTSSCHHHHHT----GGG-TCCCC---CSSCCCCEEEEEECCCCTTHHHHHHHHHCS-CCCCCEEECBCTTTC
T ss_pred -EECCCCHHHHHH----HHH-hhCCc---CccCCCceEEEEeCCCCCCHHHHHHHhcCC-CceEEEEeecCCCCC
Confidence 011000000000 000 00000 010123467788899999999999999985 567777776666644
No 74
>2j0w_A Lysine-sensitive aspartokinase 3; feedback inhibition, allosteric regulation, ACT domain, transferase, amino acid biosynthesis; HET: ADP; 2.5A {Escherichia coli} SCOP: c.73.1.3 d.58.18.10 d.58.18.10 PDB: 2j0x_A*
Probab=28.27 E-value=53 Score=31.35 Aligned_cols=108 Identities=16% Similarity=0.186 Sum_probs=0.0
Q ss_pred CCeEEEEEEe---CCCccHHHHHHHHHHHCCceEEEEEEEEcCCeEEEEEEEeecCCCCCCCChHHHHHHHHHHHHhhcc
Q 022552 99 SDATIVQLSF---GDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFITRLDTGRKVEDPDLLERIRLTIINNLLK 175 (295)
Q Consensus 99 ~~~t~V~V~~---~DrpGLl~~I~~vL~~~glnI~~A~I~T~~~~~~D~F~V~~~~~g~~~~d~~~le~L~~~L~~~L~~ 175 (295)
.+.+.|+|.+ .+.+|..++|..+|+++|++|..-. +....+. |.|... +...-.....++++...|.. +..
T Consensus 306 ~~~~~i~i~~~~m~~~~g~~~~if~~l~~~~i~vd~i~--ss~~sis--~~v~~~-~~~~~~~~~~~~~~~~el~~-~~~ 379 (449)
T 2j0w_A 306 RNQTLLTLHSLNMLHSRGFLAEVFGILARHNISVDLIT--TSEVSVA--LTLDTT-GSTSTGDTLLTQSLLMELSA-LCR 379 (449)
T ss_dssp EEEEEEEECCCSCSCHHHHHHHHTTTTTTTTCCCSEEE--EETTEEE--EEECCC-CCSSTTCCSSCHHHHHHHHH-HSC
T ss_pred CCEEEEEEEecCCCCccCHHHHHHHHHHHcCCCEEEEE--eCCCeEE--EEEecc-ccchhhHHHHHHHHHHHhcc-CCe
Q ss_pred cCCCchhHhhhccccCccCCcccccccccceEEecCCCCceEEEEEEeC---CCcchHHHHHHHHHhCCceEEE
Q 022552 176 YHPESSEQLAMGEAFGIKAPEKKLDVDIATHIHVKEDGPKRSLLYIETA---DRPGLLVEIMKIIADVNVDVES 246 (295)
Q Consensus 176 ~~~~~~~~La~~~~~~~~~~~r~~~~~~~~~V~i~~~~~~~t~IeV~a~---DRPGLL~dIt~~L~~~gI~I~~ 246 (295)
|.+.+ +...|.|.+. .+||+..++.++|.+.+|...+
T Consensus 380 -------------------------------v~~~~---~~a~vsvVG~gm~~~~gv~~~~f~aL~~ini~mIs 419 (449)
T 2j0w_A 380 -------------------------------VEVEE---GLALVALIGNDLSKACGVGKEVFGVLEPFNIRMIC 419 (449)
T ss_dssp -------------------------------EEEEE---EEEEEEEEESSCTTSSSHHHHHHSSCTTSCCCEEE
T ss_pred -------------------------------EEEeC---CeEEEEEECCCccccccHHHHHHHHHhCCCeEEEE
No 75
>3ced_A Methionine import ATP-binding protein METN 2; ABC transporter, NIL domain, structur genomics, PSI-2, protein structure initiative; 2.15A {Staphylococcus aureus subsp} SCOP: d.58.18.13
Probab=28.09 E-value=1.8e+02 Score=21.36 Aligned_cols=54 Identities=9% Similarity=-0.004 Sum_probs=38.6
Q ss_pred CcchHHHHHHHHHhCCceEEEEEEEecCCeeeeEEEEEeCCCCCChHHHHHHHHHHH
Q 022552 226 RPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVSYGGAALNSSLSQVLVNCLR 282 (295)
Q Consensus 226 RPGLL~dIt~~L~~~gI~I~~A~I~T~g~~a~D~F~V~~~G~~l~~~~~~~L~~~L~ 282 (295)
...+++++++.+ ...+||.++.|...++...-.+.+.=.|. .++..++..+.|+
T Consensus 33 ~~PvIs~l~~~~-~v~vnIL~g~I~~i~~~~~G~L~v~l~G~--~~~~~~~ai~~L~ 86 (98)
T 3ced_A 33 TEPIVSSLSTAY-DIKINILEANIKNTKNGTVGFLVLHIPYI--SSVDFGKFEKELI 86 (98)
T ss_dssp HHHHHHHHHHHH-TCCCEEEEEEEEEETTEEEEEEEEEESCC--CHHHHHHHHHHHH
T ss_pred CchHHHHHHHHH-CCcEEEEEEEeEEeCCEeEEEEEEEEeCC--CHHHHHHHHHHHH
Confidence 356778888877 57899999999999999999888865663 1233444444443
No 76
>1zhv_A Hypothetical protein ATU0741; NESG, ATR8, structural genomics, PSI, protein struc initiative; 1.50A {Agrobacterium tumefaciens str} SCOP: d.58.18.8 d.58.18.8
Probab=27.45 E-value=57 Score=26.02 Aligned_cols=31 Identities=10% Similarity=0.280 Sum_probs=25.7
Q ss_pred eEEEEEEeC---CCcchHHHHHHHHHhCCceEEE
Q 022552 216 RSLLYIETA---DRPGLLVEIMKIIADVNVDVES 246 (295)
Q Consensus 216 ~t~IeV~a~---DRPGLL~dIt~~L~~~gI~I~~ 246 (295)
.-.|+|.+. |-.|+++.|+..|++.||.|..
T Consensus 62 wr~i~v~~~l~~~~vGilA~is~pLA~agIsif~ 95 (134)
T 1zhv_A 62 WSCFKFQGPFAFDETGIVLSVISPLSTNGIGIFV 95 (134)
T ss_dssp EEEEEECSCCCCSSCCHHHHHHHHHHTTTCCCEE
T ss_pred eEEEEEecCCCccHHHHHHHHHHHHHhCCCCeEE
Confidence 456666655 8899999999999999999865
No 77
>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}
Probab=27.22 E-value=1.8e+02 Score=21.47 Aligned_cols=49 Identities=12% Similarity=0.105 Sum_probs=35.0
Q ss_pred CeEEEEEEeCCCccHHHHHHHHHHHCCce-EEEEEEEEcCCeEEEEEEEeecCCCCCC
Q 022552 100 DATIVQLSFGDRLGALIDTMNALKDLGLD-VAKGTVNTEGSVKQTKFFITRLDTGRKV 156 (295)
Q Consensus 100 ~~t~V~V~~~DrpGLl~~I~~vL~~~gln-I~~A~I~T~~~~~~D~F~V~~~~~g~~~ 156 (295)
+++.+.+.+.| +..+...|.++|+. +...- .....+.. |++.|+ +|..+
T Consensus 66 ~~~~l~f~v~d----vd~~~~~l~~~G~~~~~~~p-~~~~~G~~--~~~~DP-dGn~i 115 (128)
T 3g12_A 66 PSLQLGFQITD----LEKTVQELVKIPGAMCILDP-TDMPDGKK--AIVLDP-DGHSI 115 (128)
T ss_dssp CSEEEEEEESC----HHHHHHHHTTSTTCEEEEEE-EECC-CEE--EEEECT-TCCEE
T ss_pred CceEEEEEeCC----HHHHHHHHHHCCCceeccCc-eeCCCccE--EEEECC-CCCEE
Confidence 45678888888 88888999999999 76533 33333444 889997 88754
No 78
>2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, alloste S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10
Probab=26.39 E-value=86 Score=30.50 Aligned_cols=34 Identities=18% Similarity=0.450 Sum_probs=30.6
Q ss_pred ceEEEEEEe---CCCcchHHHHHHHHHhCCceEEEEE
Q 022552 215 KRSLLYIET---ADRPGLLVEIMKIIADVNVDVESAE 248 (295)
Q Consensus 215 ~~t~IeV~a---~DRPGLL~dIt~~L~~~gI~I~~A~ 248 (295)
+.+.|+|.+ .++||++++|-.+|+++||+|....
T Consensus 340 ~~~~I~i~~~~m~~~~g~~~~if~~la~~~I~vd~I~ 376 (510)
T 2cdq_A 340 NVTMLDIASTRMLGQVGFLAKVFSIFEELGISVDVVA 376 (510)
T ss_dssp EEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCEEEEE
T ss_pred CeEEEEEEcCCCCCcccHHHHHHHHHHHcCCcEEEEE
Confidence 468889985 7899999999999999999999884
No 79
>1ib8_A Conserved protein SP14.3; nucleic acid binding protein, ribosomal protein, essential gene, structural genomics; NMR {Streptococcus pneumoniae} SCOP: b.38.2.1 d.52.4.1
Probab=25.67 E-value=2.7e+02 Score=22.60 Aligned_cols=56 Identities=11% Similarity=0.038 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHCCceEEEEEEEEcCCeEEEEEEEeecCCCCCCCChHHHHHHHHHHHHhhc
Q 022552 114 ALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFITRLDTGRKVEDPDLLERIRLTIINNLL 174 (295)
Q Consensus 114 Ll~~I~~vL~~~glnI~~A~I~T~~~~~~D~F~V~~~~~g~~~~d~~~le~L~~~L~~~L~ 174 (295)
+..-+..++.. |+.+++..+...+.+..-..+|... +| + +-+.-+.+...|...|+
T Consensus 14 v~~li~p~~~~-g~eLvdve~~~~g~~~~LrV~ID~~-~g--i-~lddC~~vSr~is~~LD 69 (164)
T 1ib8_A 14 VREVVEPVIEA-PFELVDIEYGKIGSDMILSIFVDKP-EG--I-TLNDTADLTEMISPVLD 69 (164)
T ss_dssp HHHHHHHHHCS-SSEEEEEEEEEETTEEEEEEEEECS-SC--C-CHHHHHHHHHHHGGGTT
T ss_pred HHHHHHHHHcC-CcEEEEEEEEecCCCcEEEEEEECC-CC--C-CHHHHHHHHHHHHHHhc
Confidence 34445566667 9999999998877755433445442 34 3 23667777777777665
No 80
>3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum}
Probab=25.15 E-value=56 Score=31.26 Aligned_cols=46 Identities=17% Similarity=0.276 Sum_probs=34.5
Q ss_pred ceEEEEEEe---CCCcchHHHHHHHHHhCCceEEEEEEEecCCeeeeEEEEEe
Q 022552 215 KRSLLYIET---ADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVSY 264 (295)
Q Consensus 215 ~~t~IeV~a---~DRPGLL~dIt~~L~~~gI~I~~A~I~T~g~~a~D~F~V~~ 264 (295)
+.+.|+|.+ .+.||++++|-.+|+++||+|.... + ++ ..=.|.|..
T Consensus 297 ~~~~i~i~~~~~~~~~g~~~~if~~l~~~~i~vd~i~--~-~~-~~is~~V~~ 345 (446)
T 3tvi_A 297 NFTVIAIEKALLNSEVGFCRKILSILEMYGVSFEHMP--S-GV-DSVSLVIED 345 (446)
T ss_dssp EEEEEEEECTTGGGSTTHHHHHHHHHHTTTCCEEEBC--E-ET-TEEEEEEEH
T ss_pred CEEEEEEEecCCCccHHHHHHHHHHHHHcCCcEEEEe--c-CC-CEEEEEEec
Confidence 467888886 5899999999999999999998753 2 22 223466753
No 81
>2qsw_A Methionine import ATP-binding protein METN 2; ABC transporter, structural genomics, APC87322.1, PSI-2, protein structure initiative; 1.50A {Enterococcus faecalis} SCOP: d.58.18.13
Probab=23.32 E-value=2.2e+02 Score=20.73 Aligned_cols=41 Identities=15% Similarity=0.194 Sum_probs=33.3
Q ss_pred CcchHHHHHHHHHhCCceEEEEEEEecCCeeeeEEEEEeCCC
Q 022552 226 RPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVSYGGA 267 (295)
Q Consensus 226 RPGLL~dIt~~L~~~gI~I~~A~I~T~g~~a~D~F~V~~~G~ 267 (295)
...+++++++.| ...+||.++.|...++...-.+.+.=.|.
T Consensus 36 ~~pvis~l~~~~-~v~vnIl~g~i~~i~~~~~G~L~v~l~G~ 76 (100)
T 2qsw_A 36 KLPIISHIVQEY-QVEVSIIQGNIQQTKQGAVGSLYIQLLGE 76 (100)
T ss_dssp SSCHHHHHHHHH-TCEEEEEEEEEEEETTEEEEEEEEEEESC
T ss_pred CchHHHHHHHHh-CCCEEEEEeeceEcCCeeEEEEEEEEECC
Confidence 356788888887 57899999999999999999888864553
No 82
>2qrr_A Methionine import ATP-binding protein METN; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; 1.71A {Vibrio parahaemolyticus} SCOP: d.58.18.13
Probab=22.59 E-value=2.3e+02 Score=20.67 Aligned_cols=40 Identities=20% Similarity=0.282 Sum_probs=31.5
Q ss_pred cchHHHHHHHHHhCCceEEEEEEEecCCeeeeEEEEEeCCC
Q 022552 227 PGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVSYGGA 267 (295)
Q Consensus 227 PGLL~dIt~~L~~~gI~I~~A~I~T~g~~a~D~F~V~~~G~ 267 (295)
..+++++++.| ...+||.++.|...++...-.+.+.=.|.
T Consensus 37 ~pvis~l~~~~-~v~vnIl~g~i~~i~~~~~G~L~v~l~G~ 76 (101)
T 2qrr_A 37 APLMSQISRKY-NIDVSILSSDLDYAGGVKFGMMVAELFGN 76 (101)
T ss_dssp SCHHHHHHHHS-CCEEEEEEEEEEEETTEEEEEEEEEEESC
T ss_pred chHHHHHHHHh-CCCEEEEEeeeeEcCCeeEEEEEEEEeCC
Confidence 45777777766 46789999999999999999888864553
No 83
>1zvp_A Hypothetical protein VC0802; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 2.20A {Vibrio cholerae} SCOP: d.58.18.9 d.58.18.9
Probab=21.75 E-value=1.4e+02 Score=23.68 Aligned_cols=32 Identities=16% Similarity=0.236 Sum_probs=25.7
Q ss_pred eEEEEEEe---CCCcchHHHHHHHHHhCCceEEEE
Q 022552 216 RSLLYIET---ADRPGLLVEIMKIIADVNVDVESA 247 (295)
Q Consensus 216 ~t~IeV~a---~DRPGLL~dIt~~L~~~gI~I~~A 247 (295)
+..|+|.+ -|-.|+++.|+..|++.||.|...
T Consensus 71 wr~i~l~~~~~l~~vGi~a~is~~LA~agIsif~i 105 (133)
T 1zvp_A 71 FSLITLTVHSSLEAVGLTAAFATKLAEHGISANVI 105 (133)
T ss_dssp EEEEEEECCC--CCSCHHHHHHHHHHHTTCCCEEE
T ss_pred eEEEEEeccCCccHHHHHHHHHHHHHhCCCCcEEE
Confidence 45566654 699999999999999999998653
No 84
>3dhx_A Methionine import ATP-binding protein METN; methionine uptake, regulation, amino-acid transport, ATP-BIN hydrolase, inner membrane, membrane; 2.10A {Escherichia coli} SCOP: d.58.18.13
Probab=21.32 E-value=2.5e+02 Score=20.74 Aligned_cols=50 Identities=12% Similarity=0.137 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHCCceEEEEEEEEcCCeEEEEEEEeecCCCCCCCChHHHHHHHHHHH
Q 022552 114 ALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFITRLDTGRKVEDPDLLERIRLTII 170 (295)
Q Consensus 114 Ll~~I~~vL~~~glnI~~A~I~T~~~~~~D~F~V~~~~~g~~~~d~~~le~L~~~L~ 170 (295)
+++++++.+ ...+||..|.|...++...-.+.|.- .|. ++..++....|+
T Consensus 37 iIs~l~~~~-~v~vnIL~g~I~~i~~~~~G~L~v~l--~G~----~~~~~~ai~~L~ 86 (106)
T 3dhx_A 37 LLSETARRF-NVNNNIISAQMDYAGGVKFGIMLTEM--HGT----QQDTQAAIAWLQ 86 (106)
T ss_dssp HHHHHHHHS-CCEEEEEEEEEEEETTEEEEEEEEEE--ESC----HHHHHHHHHHHH
T ss_pred HHHHHHHHH-CCCEEEEEEEeEEECCeeEEEEEEEE--eCC----HHHHHHHHHHHH
Confidence 777777665 46689999999999998877777765 353 344444444443
No 85
>3hhh_A Transcriptional regulator, PADR family; PF03551, structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 2.70A {Enterococcus faecalis} SCOP: a.4.5.0
Probab=20.09 E-value=67 Score=24.55 Aligned_cols=64 Identities=9% Similarity=0.046 Sum_probs=40.4
Q ss_pred CcchHHHHHHHHHhCCceEEEEEEEecCCeeeeEEEEEeCCCCCChH---HHHHHHHHHHHHcCCCCC
Q 022552 226 RPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVSYGGAALNSS---LSQVLVNCLRYYLRRPET 290 (295)
Q Consensus 226 RPGLL~dIt~~L~~~gI~I~~A~I~T~g~~a~D~F~V~~~G~~l~~~---~~~~L~~~L~~~L~~~~~ 290 (295)
.+|-||.+-+-|.+.|+=-.. .....+++..-.|.+++.|...-.. ..+.+.+.+...+.....
T Consensus 45 s~gtlY~~L~rLe~~GlI~~~-~~~~~~g~~rk~Y~lT~~G~~~l~~~~~~~~~~~~~i~~il~~~~~ 111 (116)
T 3hhh_A 45 VEGTVYTILLRLEKNQWVIAE-KKPSEKGPMRKFYRLTSSGEAELADFWQRWTLLSKQVNKMKKNGGI 111 (116)
T ss_dssp CHHHHHHHHHHHHHTTSEEEE-EEECC--CEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred CccHHHHHHHHHHHCCCEEEE-eeecCCCCCceEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCcCCc
Confidence 389999999999999984433 3333345566667788877655444 345666666666654443
Done!