BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022555
(295 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255552475|ref|XP_002517281.1| cmp-2-keto-3-deoctulosonate (cmp-kdo) cytidyltransferase, putative
[Ricinus communis]
gi|223543544|gb|EEF45074.1| cmp-2-keto-3-deoctulosonate (cmp-kdo) cytidyltransferase, putative
[Ricinus communis]
Length = 294
Score = 526 bits (1355), Expect = e-147, Method: Compositional matrix adjust.
Identities = 247/276 (89%), Positives = 261/276 (94%)
Query: 19 WIVHGIVAGAAIAVAVGARAYLGRSKNFRSRVVGIIPARFASSRFEGKPLVNILGKPMIQ 78
WIVH IVAGAAIAV +GARAYL RS+ FRSRV+GIIPARFASSRF+GKPLV ILGKPMIQ
Sbjct: 18 WIVHSIVAGAAIAVGIGARAYLSRSRKFRSRVIGIIPARFASSRFQGKPLVQILGKPMIQ 77
Query: 79 RTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKY 138
RTWER+KLATTLDH++VATDDEKIAECC+ FGADVIMTSESCRNGTERCNEA+ KLEKKY
Sbjct: 78 RTWERAKLATTLDHIIVATDDEKIAECCRGFGADVIMTSESCRNGTERCNEAIGKLEKKY 137
Query: 139 DIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGY 198
D+VVNIQGDEPLIEPEIIDG+VKALQ APDAVFSTAVTSLKPEDAFDPNRVKCVVDN GY
Sbjct: 138 DVVVNIQGDEPLIEPEIIDGIVKALQEAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNQGY 197
Query: 199 AIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVL 258
AIYFSRGLIPYNKSGK+NPQFPYLLHLGIQSYD+ FLKIYP L PTPLQLEEDLEQLKVL
Sbjct: 198 AIYFSRGLIPYNKSGKINPQFPYLLHLGIQSYDAKFLKIYPELQPTPLQLEEDLEQLKVL 257
Query: 259 ENGYKMKVIKVDHEAHGVDAPEDVEKIESFMRERNL 294
ENGYKMKVIKVDHEAHGVDAPEDVEKIE MRE N+
Sbjct: 258 ENGYKMKVIKVDHEAHGVDAPEDVEKIERLMREHNV 293
>gi|449431840|ref|XP_004133708.1| PREDICTED: 3-deoxy-manno-octulosonate cytidylyltransferase-like
[Cucumis sativus]
Length = 297
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 243/281 (86%), Positives = 263/281 (93%)
Query: 15 STKSWIVHGIVAGAAIAVAVGARAYLGRSKNFRSRVVGIIPARFASSRFEGKPLVNILGK 74
S K+WIVHGIVAG AI A GAR+YLGRSK FRSRVVGIIPARFASSRFEGKPLV ILGK
Sbjct: 17 SAKAWIVHGIVAGIAIGAAFGARSYLGRSKKFRSRVVGIIPARFASSRFEGKPLVEILGK 76
Query: 75 PMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKL 134
PMIQRTWER+K+ATTLD +VVATDD +IA+CC+ FGADV+MTSESCRNGTERCNEALQKL
Sbjct: 77 PMIQRTWERAKMATTLDCVVVATDDARIAQCCKGFGADVVMTSESCRNGTERCNEALQKL 136
Query: 135 EKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVD 194
EKKYDIVVNIQGDEPLIEPEIIDG+VKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVD
Sbjct: 137 EKKYDIVVNIQGDEPLIEPEIIDGIVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVD 196
Query: 195 NHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQ 254
+ GYAIYFSRGLIP+NKSGKVN Q+PYLLHLGIQS+DS FL +YP L TPLQLEEDLEQ
Sbjct: 197 SRGYAIYFSRGLIPFNKSGKVNLQYPYLLHLGIQSFDSKFLSMYPELESTPLQLEEDLEQ 256
Query: 255 LKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFMRERNLS 295
LKVLE+GYKMKVIKV+HEAHGVD PEDV+KIESFM+ERNL+
Sbjct: 257 LKVLEHGYKMKVIKVEHEAHGVDVPEDVDKIESFMKERNLA 297
>gi|255587342|ref|XP_002534236.1| cmp-2-keto-3-deoctulosonate (cmp-kdo) cytidyltransferase, putative
[Ricinus communis]
gi|223525656|gb|EEF28143.1| cmp-2-keto-3-deoctulosonate (cmp-kdo) cytidyltransferase, putative
[Ricinus communis]
Length = 290
Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust.
Identities = 241/276 (87%), Positives = 257/276 (93%)
Query: 19 WIVHGIVAGAAIAVAVGARAYLGRSKNFRSRVVGIIPARFASSRFEGKPLVNILGKPMIQ 78
WIVH IVAGAAIAV VGA AYLGR + FR RV+GIIPARF SSRF+GKPLV+ILGKPMIQ
Sbjct: 14 WIVHSIVAGAAIAVGVGAGAYLGRFRKFRRRVIGIIPARFDSSRFQGKPLVHILGKPMIQ 73
Query: 79 RTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKY 138
RTWER+KLATTLDH++VATD+EKIAECC+ FGADVIMTSESCRNGTERCNEAL KLEKKY
Sbjct: 74 RTWERAKLATTLDHIIVATDNEKIAECCRGFGADVIMTSESCRNGTERCNEALGKLEKKY 133
Query: 139 DIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGY 198
D+VVNIQGDEPLIEP IIDG+VKALQAAP+AVFSTAVTSLKPEDAFDPNRVKCVVDN GY
Sbjct: 134 DVVVNIQGDEPLIEPVIIDGIVKALQAAPNAVFSTAVTSLKPEDAFDPNRVKCVVDNQGY 193
Query: 199 AIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVL 258
AIYFSRGL+PYNKSGKVN QFPYLLHLGIQSYD+ FLKIY L PTPLQLEEDLEQLKVL
Sbjct: 194 AIYFSRGLVPYNKSGKVNAQFPYLLHLGIQSYDAKFLKIYSELQPTPLQLEEDLEQLKVL 253
Query: 259 ENGYKMKVIKVDHEAHGVDAPEDVEKIESFMRERNL 294
ENGYKMKVIKVDHEAHGVD PED+EKIE MRERN+
Sbjct: 254 ENGYKMKVIKVDHEAHGVDTPEDIEKIERLMRERNV 289
>gi|224114948|ref|XP_002316900.1| predicted protein [Populus trichocarpa]
gi|222859965|gb|EEE97512.1| predicted protein [Populus trichocarpa]
Length = 293
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 252/280 (90%), Positives = 268/280 (95%)
Query: 16 TKSWIVHGIVAGAAIAVAVGARAYLGRSKNFRSRVVGIIPARFASSRFEGKPLVNILGKP 75
T+SWIVHGIVAGAAIA A+GA AYL R + FRS+VVGIIPAR+ASSRFEGKPLVNILGKP
Sbjct: 14 TRSWIVHGIVAGAAIAAAIGAGAYLVRYRKFRSQVVGIIPARYASSRFEGKPLVNILGKP 73
Query: 76 MIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE 135
MIQRTWER+KLATTLDH+VVATDDEKIAECC+ FGADV+MTSESCRNGTERCNEALQKL+
Sbjct: 74 MIQRTWERAKLATTLDHIVVATDDEKIAECCRGFGADVVMTSESCRNGTERCNEALQKLD 133
Query: 136 KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDN 195
KKYD+VVNIQGDEPLIEPEIIDG+VK+LQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDN
Sbjct: 134 KKYDVVVNIQGDEPLIEPEIIDGIVKSLQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDN 193
Query: 196 HGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQL 255
GYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYD+ FLKIYP L PTPLQLEEDLEQL
Sbjct: 194 QGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDAKFLKIYPELQPTPLQLEEDLEQL 253
Query: 256 KVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFMRERNLS 295
KVLENGYKMKVIKVDHEAHGVD PEDVEKIE+ MRE+NLS
Sbjct: 254 KVLENGYKMKVIKVDHEAHGVDIPEDVEKIETLMREQNLS 293
>gi|225461429|ref|XP_002284913.1| PREDICTED: 3-deoxy-manno-octulosonate cytidylyltransferase [Vitis
vinifera]
gi|302143017|emb|CBI20312.3| unnamed protein product [Vitis vinifera]
Length = 297
Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust.
Identities = 248/283 (87%), Positives = 267/283 (94%), Gaps = 2/283 (0%)
Query: 15 STKSWIVHGIVAGAAIAVAVGARAYL--GRSKNFRSRVVGIIPARFASSRFEGKPLVNIL 72
+TK+WI+HGI+ GAA+AVA+GA AYL RS FRSRVVGIIPARFASSRF+GKPLV IL
Sbjct: 15 TTKAWIIHGILTGAAVAVALGAHAYLLLRRSGKFRSRVVGIIPARFASSRFQGKPLVQIL 74
Query: 73 GKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQ 132
GKPMIQRTWER+KLATTLDH+VVATDD+KIA+CC+ FGADVIMTSESCRNGTERCNEALQ
Sbjct: 75 GKPMIQRTWERAKLATTLDHVVVATDDDKIADCCRGFGADVIMTSESCRNGTERCNEALQ 134
Query: 133 KLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCV 192
KLEK+YDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPED FDPNRVKC+
Sbjct: 135 KLEKQYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDGFDPNRVKCI 194
Query: 193 VDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDL 252
VDN GYAIYFSRGLIP+NKSG+VN QFPYLLHLGIQSYD+ FL+IYP L PTPLQLEEDL
Sbjct: 195 VDNRGYAIYFSRGLIPFNKSGEVNQQFPYLLHLGIQSYDTKFLRIYPDLPPTPLQLEEDL 254
Query: 253 EQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFMRERNLS 295
EQLKVLENGYKMKVIKVDHEAHGVD PEDV+KIESFMRERNLS
Sbjct: 255 EQLKVLENGYKMKVIKVDHEAHGVDTPEDVDKIESFMRERNLS 297
>gi|30695393|ref|NP_175708.2| 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO
synthetase) [Arabidopsis thaliana]
gi|12324630|gb|AAG52266.1|AC019018_3 putative deoxyoctulonosic acid synthetase; 116195-114393
[Arabidopsis thaliana]
gi|22213935|emb|CAD43603.1| putative CMP-KDO synthetase [Arabidopsis thaliana]
gi|222424524|dbj|BAH20217.1| AT1G53000 [Arabidopsis thaliana]
gi|332194754|gb|AEE32875.1| 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO
synthetase) [Arabidopsis thaliana]
Length = 290
Score = 499 bits (1286), Expect = e-139, Method: Compositional matrix adjust.
Identities = 246/279 (88%), Positives = 261/279 (93%)
Query: 17 KSWIVHGIVAGAAIAVAVGARAYLGRSKNFRSRVVGIIPARFASSRFEGKPLVNILGKPM 76
K+WIV+GI+AG AIA A+GARAYLGRSK FRSRVVGIIPAR+ASSRFEGKPLV ILGKPM
Sbjct: 12 KTWIVNGILAGTAIAAAIGARAYLGRSKKFRSRVVGIIPARYASSRFEGKPLVQILGKPM 71
Query: 77 IQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEK 136
IQRTWERSKLATTLDH+VVATDDE+IAECC+ FGADVIMTSESCRNGTERCNEAL+KLEK
Sbjct: 72 IQRTWERSKLATTLDHIVVATDDERIAECCRGFGADVIMTSESCRNGTERCNEALEKLEK 131
Query: 137 KYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNH 196
KYD+VVNIQGDEPLIEPEIIDGVVKALQ PDAVFSTAVTSLKPED DPNRVKCVVDN
Sbjct: 132 KYDVVVNIQGDEPLIEPEIIDGVVKALQVTPDAVFSTAVTSLKPEDGLDPNRVKCVVDNR 191
Query: 197 GYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLK 256
GYAIYFSRGLIPYNKSGKVNP FPY+LHLGIQS+DS FLK+Y L PTPLQ EEDLEQLK
Sbjct: 192 GYAIYFSRGLIPYNKSGKVNPDFPYMLHLGIQSFDSKFLKVYSELQPTPLQQEEDLEQLK 251
Query: 257 VLENGYKMKVIKVDHEAHGVDAPEDVEKIESFMRERNLS 295
VLENGYKMKVIKVDHEAHGVD P+DVEKIES MRERN+S
Sbjct: 252 VLENGYKMKVIKVDHEAHGVDTPDDVEKIESLMRERNMS 290
>gi|224128153|ref|XP_002329094.1| predicted protein [Populus trichocarpa]
gi|222869763|gb|EEF06894.1| predicted protein [Populus trichocarpa]
Length = 288
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 245/279 (87%), Positives = 263/279 (94%)
Query: 17 KSWIVHGIVAGAAIAVAVGARAYLGRSKNFRSRVVGIIPARFASSRFEGKPLVNILGKPM 76
K WIVH IVAGAAIA A+GA AYLGR + FRSRVVGIIPAR+ASSRFEGKPLVNILGKPM
Sbjct: 10 KFWIVHSIVAGAAIAAAIGAGAYLGRYRKFRSRVVGIIPARYASSRFEGKPLVNILGKPM 69
Query: 77 IQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEK 136
IQRTWER+KLA+TLDH+VVATDDEKIAECC+ FGADVIMTSESCRNGTERCNEALQKL+K
Sbjct: 70 IQRTWERAKLASTLDHIVVATDDEKIAECCRGFGADVIMTSESCRNGTERCNEALQKLDK 129
Query: 137 KYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNH 196
KYD+VVNIQGDEPLIEPEIID +VKALQAAPDAVFSTAVT+LKPEDAFDPNRVKCVVDNH
Sbjct: 130 KYDVVVNIQGDEPLIEPEIIDRIVKALQAAPDAVFSTAVTALKPEDAFDPNRVKCVVDNH 189
Query: 197 GYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLK 256
GYAIYFSRGLIPYNK+GKVN QFPY+LHLGIQSYD+ FLKIYP L TPLQLEEDLEQLK
Sbjct: 190 GYAIYFSRGLIPYNKTGKVNTQFPYMLHLGIQSYDTKFLKIYPELRSTPLQLEEDLEQLK 249
Query: 257 VLENGYKMKVIKVDHEAHGVDAPEDVEKIESFMRERNLS 295
VLENGYKMKVIKVDHEAHGVD PEDVEK+E+ MRE++ S
Sbjct: 250 VLENGYKMKVIKVDHEAHGVDIPEDVEKLETLMREQSFS 288
>gi|356514754|ref|XP_003526068.1| PREDICTED: 3-deoxy-manno-octulosonate cytidylyltransferase-like
[Glycine max]
Length = 305
Score = 496 bits (1278), Expect = e-138, Method: Compositional matrix adjust.
Identities = 250/282 (88%), Positives = 261/282 (92%)
Query: 14 SSTKSWIVHGIVAGAAIAVAVGARAYLGRSKNFRSRVVGIIPARFASSRFEGKPLVNILG 73
++ K+WI+HGIVAG AIA AVGARAY+ R FRSRVVGIIPARFASSRFEGKPLV ILG
Sbjct: 24 NTAKAWIIHGIVAGVAIAAAVGARAYMTRFSKFRSRVVGIIPARFASSRFEGKPLVQILG 83
Query: 74 KPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQK 133
KPMIQRTWER+KLA TLDH+VVATDDEKIA+CC+QFGADVIMTSESCRNGTERCNEALQK
Sbjct: 84 KPMIQRTWERAKLAATLDHVVVATDDEKIADCCRQFGADVIMTSESCRNGTERCNEALQK 143
Query: 134 LEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVV 193
L KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDA DPNRVKCVV
Sbjct: 144 LGKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAHDPNRVKCVV 203
Query: 194 DNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLE 253
DN GYAIYFSRGLIP+NKSGKVN QFPYLLHLGIQSYD+ FL IYP L PTPLQLEEDLE
Sbjct: 204 DNRGYAIYFSRGLIPFNKSGKVNQQFPYLLHLGIQSYDAKFLNIYPNLRPTPLQLEEDLE 263
Query: 254 QLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFMRERNLS 295
QLKVLENGYKMKVIKV HEAHGVD PEDV KIES MRERNLS
Sbjct: 264 QLKVLENGYKMKVIKVHHEAHGVDTPEDVGKIESLMRERNLS 305
>gi|356543296|ref|XP_003540098.1| PREDICTED: 3-deoxy-manno-octulosonate cytidylyltransferase-like
[Glycine max]
Length = 306
Score = 496 bits (1277), Expect = e-138, Method: Compositional matrix adjust.
Identities = 249/281 (88%), Positives = 260/281 (92%)
Query: 15 STKSWIVHGIVAGAAIAVAVGARAYLGRSKNFRSRVVGIIPARFASSRFEGKPLVNILGK 74
+ K+WI+HGIVAG AIA AVGARAY+ R FRSRVVGIIPARFASSRF+GKPLV ILGK
Sbjct: 26 TAKAWIIHGIVAGVAIAAAVGARAYMTRFSKFRSRVVGIIPARFASSRFQGKPLVQILGK 85
Query: 75 PMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKL 134
PMIQRTWER+KLA TLDH+VVATDDEKIA+CC+QFGADVIMTSESCRNGTERCNEALQKL
Sbjct: 86 PMIQRTWERAKLAATLDHIVVATDDEKIADCCRQFGADVIMTSESCRNGTERCNEALQKL 145
Query: 135 EKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVD 194
KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDA DPNRVKCVVD
Sbjct: 146 GKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAHDPNRVKCVVD 205
Query: 195 NHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQ 254
N GYAIYFSRGLIP+NKSG VN QFPYLLHLGIQSYD+ FL IYP L PTPLQLEEDLEQ
Sbjct: 206 NRGYAIYFSRGLIPFNKSGMVNQQFPYLLHLGIQSYDAKFLNIYPDLQPTPLQLEEDLEQ 265
Query: 255 LKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFMRERNLS 295
LKVLENGYKMKVIKVDHEAHGVD PEDV KIES MRERNLS
Sbjct: 266 LKVLENGYKMKVIKVDHEAHGVDTPEDVGKIESLMRERNLS 306
>gi|297853072|ref|XP_002894417.1| cytidylyltransferase family [Arabidopsis lyrata subsp. lyrata]
gi|297340259|gb|EFH70676.1| cytidylyltransferase family [Arabidopsis lyrata subsp. lyrata]
Length = 293
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 246/279 (88%), Positives = 261/279 (93%)
Query: 17 KSWIVHGIVAGAAIAVAVGARAYLGRSKNFRSRVVGIIPARFASSRFEGKPLVNILGKPM 76
K+WIVHGI+AGAAIA A+GA AYLGRS+ FRSRVVGIIPAR+ASSRFEGKPLV ILGKPM
Sbjct: 15 KTWIVHGILAGAAIAAAIGASAYLGRSRKFRSRVVGIIPARYASSRFEGKPLVQILGKPM 74
Query: 77 IQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEK 136
IQRTWERSKLATTLDH+VVATDDE+IAECC+ FGADVIMTSESCRNGTERCNEAL+KL+K
Sbjct: 75 IQRTWERSKLATTLDHIVVATDDERIAECCRGFGADVIMTSESCRNGTERCNEALEKLDK 134
Query: 137 KYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNH 196
KYD+VVNIQGDEPLIEPEIIDGVVKALQ PDAVFSTAVTSLKPED DPNRVKCVVDN
Sbjct: 135 KYDVVVNIQGDEPLIEPEIIDGVVKALQVTPDAVFSTAVTSLKPEDGLDPNRVKCVVDNR 194
Query: 197 GYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLK 256
GYAIYFSRGLIPYNKSGKVNP FPY+LHLGIQS+DS FLK+Y L PTPLQ EEDLEQLK
Sbjct: 195 GYAIYFSRGLIPYNKSGKVNPDFPYMLHLGIQSFDSKFLKVYSELQPTPLQQEEDLEQLK 254
Query: 257 VLENGYKMKVIKVDHEAHGVDAPEDVEKIESFMRERNLS 295
VLENGYKMKVIKVDHEAHGVD P+DVEKIES MRERNLS
Sbjct: 255 VLENGYKMKVIKVDHEAHGVDTPDDVEKIESLMRERNLS 293
>gi|225468421|ref|XP_002263680.1| PREDICTED: 3-deoxy-manno-octulosonate cytidylyltransferase [Vitis
vinifera]
gi|297735989|emb|CBI23963.3| unnamed protein product [Vitis vinifera]
Length = 293
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 240/293 (81%), Positives = 259/293 (88%), Gaps = 1/293 (0%)
Query: 3 SKSICSPSESSSSTKSWIVHGIVAGAAIAVAVGARAYLGRSKNFRSRVVGIIPARFASSR 62
S + S S+ ++T SWI+ GI+AGAA+A A L RS RS+VVGIIPARFASSR
Sbjct: 2 SPRLNSSSDPDATTGSWIIRGILAGAAVAGACALVT-LRRSVKLRSQVVGIIPARFASSR 60
Query: 63 FEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRN 122
FEGKPLV +LGKPMIQRTWER+KLATTLD LVVATDDEKIAECC+ FGADVIMTSESCRN
Sbjct: 61 FEGKPLVPLLGKPMIQRTWERAKLATTLDQLVVATDDEKIAECCRGFGADVIMTSESCRN 120
Query: 123 GTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPED 182
GTERCNEAL+KL K +DIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPED
Sbjct: 121 GTERCNEALKKLRKNFDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPED 180
Query: 183 AFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLH 242
A DPNRVKC+VDN GYAIYFSRGLIPYNKSGKVNP FPY LHLGIQSYD+ FL+IYP L
Sbjct: 181 ASDPNRVKCIVDNRGYAIYFSRGLIPYNKSGKVNPHFPYFLHLGIQSYDAQFLRIYPELS 240
Query: 243 PTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFMRERNLS 295
PTPLQLEEDLEQLKVLENGYKMKVIKVDH+AHGVD PEDVEKIE+ MR +NLS
Sbjct: 241 PTPLQLEEDLEQLKVLENGYKMKVIKVDHDAHGVDTPEDVEKIEALMRAQNLS 293
>gi|192913006|gb|ACF06611.1| 3-deoxy-manno-octulosonate
cytidylyltransferase/nucleotidyltransferase [Elaeis
guineensis]
Length = 295
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 234/279 (83%), Positives = 256/279 (91%)
Query: 17 KSWIVHGIVAGAAIAVAVGARAYLGRSKNFRSRVVGIIPARFASSRFEGKPLVNILGKPM 76
++WIVH +VAGAA+AV A AY + RSRVVGIIPARFASSRFEGKPLV+ILGKPM
Sbjct: 17 RAWIVHALVAGAAVAVGAHAAAYFKWFRKGRSRVVGIIPARFASSRFEGKPLVHILGKPM 76
Query: 77 IQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEK 136
IQRTWER+KLA+TLDH+VVATDDE+IAECC+ FGADVIMTSESCRNGTERCNEAL KL K
Sbjct: 77 IQRTWERAKLASTLDHIVVATDDERIAECCRGFGADVIMTSESCRNGTERCNEALLKLGK 136
Query: 137 KYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNH 196
YDIVVNIQGDEPL+EP+IIDG+V+ALQ APDAVFSTAVTSLKPED DPNRVKCVVDNH
Sbjct: 137 HYDIVVNIQGDEPLLEPDIIDGIVRALQGAPDAVFSTAVTSLKPEDGLDPNRVKCVVDNH 196
Query: 197 GYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLK 256
GYAIYFSRGLIP+NKSGKVNPQFPYLLHLGIQS+DS FL+IYP L PTPLQLEEDLEQLK
Sbjct: 197 GYAIYFSRGLIPFNKSGKVNPQFPYLLHLGIQSFDSKFLRIYPQLPPTPLQLEEDLEQLK 256
Query: 257 VLENGYKMKVIKVDHEAHGVDAPEDVEKIESFMRERNLS 295
VLENGYKMKVIKVDH+AHGVD PEDVEKIE+ MRER++S
Sbjct: 257 VLENGYKMKVIKVDHDAHGVDTPEDVEKIEALMRERSIS 295
>gi|116783700|gb|ABK23054.1| unknown [Picea sitchensis]
Length = 290
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 228/286 (79%), Positives = 249/286 (87%)
Query: 10 SESSSSTKSWIVHGIVAGAAIAVAVGARAYLGRSKNFRSRVVGIIPARFASSRFEGKPLV 69
+ S K WI+HG++AGAA+A A + RS R+RVVGIIPARF S+RFEGKPLV
Sbjct: 5 ASGSGQCKFWILHGLLAGAAVAAATVGFRLVARSNRARNRVVGIIPARFRSTRFEGKPLV 64
Query: 70 NILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNE 129
ILGKPMIQRTWER+ LA TLD +V+ATDDEKIAECC FGADV+MT ESCRNGTERCNE
Sbjct: 65 EILGKPMIQRTWERAMLAATLDKVVIATDDEKIAECCLGFGADVVMTPESCRNGTERCNE 124
Query: 130 ALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRV 189
AL+KL+KKYDIVVNIQGDEPLIEPEIIDGVVKALQ APDAVFSTAVTSL PEDA DPNRV
Sbjct: 125 ALRKLKKKYDIVVNIQGDEPLIEPEIIDGVVKALQGAPDAVFSTAVTSLNPEDALDPNRV 184
Query: 190 KCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLE 249
KCVVD HGYAIYFSRGL+P+NK+GKVNP FPY LHLGIQSYD+ FL IYP LHPTPLQLE
Sbjct: 185 KCVVDKHGYAIYFSRGLVPFNKTGKVNPNFPYHLHLGIQSYDAKFLGIYPQLHPTPLQLE 244
Query: 250 EDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFMRERNLS 295
EDLEQLKVLENGYKMKVIKVDHEAHGVD P D+ KIE+FMRERN+S
Sbjct: 245 EDLEQLKVLENGYKMKVIKVDHEAHGVDVPSDIAKIEAFMRERNIS 290
>gi|242091357|ref|XP_002441511.1| hypothetical protein SORBIDRAFT_09g028380 [Sorghum bicolor]
gi|241946796|gb|EES19941.1| hypothetical protein SORBIDRAFT_09g028380 [Sorghum bicolor]
Length = 296
Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust.
Identities = 222/278 (79%), Positives = 247/278 (88%), Gaps = 1/278 (0%)
Query: 17 KSWIVHGIVAGAAIAVAVGARAYLGRSKNFRSRVVGIIPARFASSRFEGKPLVNILGKPM 76
++W++HG+V GAA A A A Y R FRSR VGIIPARFAS+RFEGKPLV+ILGKPM
Sbjct: 19 RAWVLHGLVLGAAAAAAAAAYLY-RRPSGFRSRAVGIIPARFASTRFEGKPLVHILGKPM 77
Query: 77 IQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEK 136
IQRTWER LA++LDH+VVATDDE+IAECC+ FGADVIMTSESC+NG+ERC EAL+KLEK
Sbjct: 78 IQRTWERVMLASSLDHVVVATDDERIAECCRGFGADVIMTSESCKNGSERCCEALKKLEK 137
Query: 137 KYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNH 196
+YDIVVNIQGDEPLIEPEIIDGVV ALQ APDAVFSTAVTSLKPEDAFD NRVKCVVDN
Sbjct: 138 RYDIVVNIQGDEPLIEPEIIDGVVMALQRAPDAVFSTAVTSLKPEDAFDTNRVKCVVDNQ 197
Query: 197 GYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLK 256
GYAIYFSRGLIP+NKSG VNP++ YLLHLGI +DS FLKIYP L PTPLQ+EEDLEQLK
Sbjct: 198 GYAIYFSRGLIPFNKSGNVNPKYLYLLHLGISGFDSKFLKIYPELPPTPLQMEEDLEQLK 257
Query: 257 VLENGYKMKVIKVDHEAHGVDAPEDVEKIESFMRERNL 294
VLEN Y+MKVIKVDH+AHGVDAPEDVEKIE+ MR RN+
Sbjct: 258 VLENSYRMKVIKVDHDAHGVDAPEDVEKIEALMRARNI 295
>gi|147815280|emb|CAN72248.1| hypothetical protein VITISV_008336 [Vitis vinifera]
Length = 264
Score = 456 bits (1173), Expect = e-126, Method: Compositional matrix adjust.
Identities = 217/243 (89%), Positives = 228/243 (93%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPARFASSRFEGKPLV +LGKPMIQRTWER+KLATTLD LVVATDDEKIAECC+ FGAD
Sbjct: 22 IIPARFASSRFEGKPLVPLLGKPMIQRTWERAKLATTLDQLVVATDDEKIAECCRGFGAD 81
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFS 172
VIMTSESCRNGTERCNEAL+KL K +DIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFS
Sbjct: 82 VIMTSESCRNGTERCNEALKKLRKNFDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFS 141
Query: 173 TAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDS 232
TAVTSLKPEDA DPNRVKC+VDN GYAIYFSRGLIPYNKSGKVNP FPY LHLGIQSYD+
Sbjct: 142 TAVTSLKPEDASDPNRVKCIVDNRGYAIYFSRGLIPYNKSGKVNPHFPYFLHLGIQSYDA 201
Query: 233 NFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFMRER 292
FL+IYP L PTPLQLEEDLEQLKVLENGYKMKVIKVDH+AHGVD PEDVEKIE+ MR +
Sbjct: 202 QFLRIYPELSPTPLQLEEDLEQLKVLENGYKMKVIKVDHDAHGVDTPEDVEKIEALMRAQ 261
Query: 293 NLS 295
NLS
Sbjct: 262 NLS 264
>gi|357132582|ref|XP_003567908.1| PREDICTED: 3-deoxy-manno-octulosonate cytidylyltransferase-like
[Brachypodium distachyon]
Length = 290
Score = 456 bits (1172), Expect = e-126, Method: Compositional matrix adjust.
Identities = 229/292 (78%), Positives = 253/292 (86%), Gaps = 6/292 (2%)
Query: 5 SICSP-SESSSS-TKSWIVHGIVAGAAIAVAVGARAYLGRSKNFRSRVVGIIPARFASSR 62
+IC+P SESS S +++W++HG+ GAA A A R R + FR+ VGIIPAR+ASSR
Sbjct: 2 TICAPASESSGSGSRAWVLHGLALGAAAAAAYLYR----RPRGFRTLAVGIIPARYASSR 57
Query: 63 FEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRN 122
FEGKPL ILGKPMIQRTWER LA++LDH+VVATDDEKIAECC+ FGADVIMTS SC+N
Sbjct: 58 FEGKPLALILGKPMIQRTWERVMLASSLDHVVVATDDEKIAECCRGFGADVIMTSVSCQN 117
Query: 123 GTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPED 182
G+ERC EALQKLEK YDIVVNIQGDEPLIEPEIIDGVV ALQ APDAVFSTAVT+LKPED
Sbjct: 118 GSERCCEALQKLEKCYDIVVNIQGDEPLIEPEIIDGVVMALQRAPDAVFSTAVTALKPED 177
Query: 183 AFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLH 242
AFD NRVKCVVDN GYAIYFSRGLIP+NKSGK NPQFPY LHLGI +DS FLKIYP L
Sbjct: 178 AFDTNRVKCVVDNQGYAIYFSRGLIPFNKSGKANPQFPYHLHLGISCFDSKFLKIYPQLA 237
Query: 243 PTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFMRERNL 294
PTPLQLEEDLEQLKVLENGY+MKVIKVDH+AHGVDAPEDVEKIE+ MR RN+
Sbjct: 238 PTPLQLEEDLEQLKVLENGYRMKVIKVDHDAHGVDAPEDVEKIEALMRARNI 289
>gi|147789206|emb|CAN62581.1| hypothetical protein VITISV_036570 [Vitis vinifera]
Length = 297
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 215/238 (90%), Positives = 228/238 (95%)
Query: 58 FASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTS 117
FASSRF+GKPLV ILGKPMIQRTWER+KLATTLDH+VVATDD+KIA+CC+ FGADVIMTS
Sbjct: 60 FASSRFQGKPLVQILGKPMIQRTWERAKLATTLDHVVVATDDDKIADCCRGFGADVIMTS 119
Query: 118 ESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTS 177
ESCRNGTERCNEALQKLEK+YDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTS
Sbjct: 120 ESCRNGTERCNEALQKLEKQYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTS 179
Query: 178 LKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKI 237
LKPED FDPNRVKC+VDN GYAIYFSRGLIP+NKSG+VN FPYLLHLGIQSYD+ FL+I
Sbjct: 180 LKPEDGFDPNRVKCIVDNRGYAIYFSRGLIPFNKSGEVNQXFPYLLHLGIQSYDTKFLRI 239
Query: 238 YPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFMRERNLS 295
YP L PTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVD PEDV+KIESFMRERNLS
Sbjct: 240 YPDLPPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDTPEDVDKIESFMRERNLS 297
>gi|326522046|dbj|BAK04151.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 293
Score = 449 bits (1154), Expect = e-124, Method: Compositional matrix adjust.
Identities = 229/291 (78%), Positives = 249/291 (85%), Gaps = 3/291 (1%)
Query: 6 IC-SPSESSSST-KSWIVHGIVAGAAIAVAVGARAYLGRSKNFRSRVVGIIPARFASSRF 63
IC +PSESS S ++W+ HG+ GAA A A A Y R + FRS VGIIPAR+ASSRF
Sbjct: 3 ICPAPSESSGSGGRAWVFHGLALGAAAAAAAAAYLYR-RPRGFRSLAVGIIPARYASSRF 61
Query: 64 EGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNG 123
EGKPL ILGKPMIQRTWER LA++LDH+VVATDDEKIAECC+ FGADV+MTS SC+NG
Sbjct: 62 EGKPLALILGKPMIQRTWERVMLASSLDHVVVATDDEKIAECCRGFGADVVMTSVSCQNG 121
Query: 124 TERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDA 183
+ERC EALQKL K YDIVVNIQGDEPLIEPEIIDGVV ALQ APDAVFSTA T+LKPEDA
Sbjct: 122 SERCCEALQKLGKHYDIVVNIQGDEPLIEPEIIDGVVMALQRAPDAVFSTAATALKPEDA 181
Query: 184 FDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHP 243
FD NRVKCVVDN GYAIYFSRGLIP NKSGKVNP FPYLLHLGI +DS FLKIYP L P
Sbjct: 182 FDTNRVKCVVDNQGYAIYFSRGLIPSNKSGKVNPHFPYLLHLGISGFDSKFLKIYPQLTP 241
Query: 244 TPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFMRERNL 294
TPLQLEEDLEQLKVLENGY+MKVIKVDH+AHGVDAPEDVEKIE+ MR RN+
Sbjct: 242 TPLQLEEDLEQLKVLENGYRMKVIKVDHDAHGVDAPEDVEKIEALMRARNI 292
>gi|115465429|ref|NP_001056314.1| Os05g0561500 [Oryza sativa Japonica Group]
gi|51854266|gb|AAU10647.1| putative 3-deoxy-manno-octulosonate cytidylyltransferase [Oryza
sativa Japonica Group]
gi|113579865|dbj|BAF18228.1| Os05g0561500 [Oryza sativa Japonica Group]
gi|215692692|dbj|BAG88112.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632549|gb|EEE64681.1| hypothetical protein OsJ_19536 [Oryza sativa Japonica Group]
Length = 297
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 214/253 (84%), Positives = 228/253 (90%)
Query: 42 RSKNFRSRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEK 101
R FR R VGIIPARFASSRFEGKPL ILGKPMIQRTWER LA++LDH+VVATDDE+
Sbjct: 44 RPGGFRGRAVGIIPARFASSRFEGKPLAPILGKPMIQRTWERVMLASSLDHVVVATDDER 103
Query: 102 IAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVK 161
IAECC+ FGADVIMTSESCRNG+ERC EALQKL K YDIVVNIQGDEPLIEPEIIDGVV
Sbjct: 104 IAECCRGFGADVIMTSESCRNGSERCCEALQKLNKHYDIVVNIQGDEPLIEPEIIDGVVM 163
Query: 162 ALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPY 221
ALQ APDAVFSTAVT+LKPEDA D NRVKCV+DN GYAIYFSRGLIP+NKSGKVNPQFPY
Sbjct: 164 ALQRAPDAVFSTAVTALKPEDASDTNRVKCVLDNQGYAIYFSRGLIPFNKSGKVNPQFPY 223
Query: 222 LLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPED 281
LLHLGI +DS FLKIYP L PTPLQLEEDLEQLKVLENGY+MKVIKVDH+AHGVDAPED
Sbjct: 224 LLHLGIAGFDSKFLKIYPELPPTPLQLEEDLEQLKVLENGYRMKVIKVDHDAHGVDAPED 283
Query: 282 VEKIESFMRERNL 294
VEKIE+ MR RN+
Sbjct: 284 VEKIEALMRARNI 296
>gi|218197263|gb|EEC79690.1| hypothetical protein OsI_20971 [Oryza sativa Indica Group]
Length = 297
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 213/253 (84%), Positives = 227/253 (89%)
Query: 42 RSKNFRSRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEK 101
R FR R VGIIPARFASSRFEGKPL ILGKPMIQRTWER LA++LDH+VVATDDE+
Sbjct: 44 RPGGFRGRAVGIIPARFASSRFEGKPLAPILGKPMIQRTWERVMLASSLDHVVVATDDER 103
Query: 102 IAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVK 161
IAECC+ FGADVIMTSESCRNG+ERC EALQKL K YDIVVNIQGDEPLIEPEIIDGVV
Sbjct: 104 IAECCRGFGADVIMTSESCRNGSERCCEALQKLNKHYDIVVNIQGDEPLIEPEIIDGVVM 163
Query: 162 ALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPY 221
ALQ APDAVFSTAVT+LKPEDA D NRVKCV+DN GYAIYFSRGLIP+NKSGKVNPQFPY
Sbjct: 164 ALQRAPDAVFSTAVTALKPEDASDTNRVKCVLDNQGYAIYFSRGLIPFNKSGKVNPQFPY 223
Query: 222 LLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPED 281
LLHLGI +DS FLKIYP L PTPLQLEEDLEQLKVLENGY+MKVIKVDH+AHGVDAPED
Sbjct: 224 LLHLGIAGFDSKFLKIYPELPPTPLQLEEDLEQLKVLENGYRMKVIKVDHDAHGVDAPED 283
Query: 282 VEKIESFMRERNL 294
VEKIE+ M RN+
Sbjct: 284 VEKIEALMHARNI 296
>gi|162461546|ref|NP_001105657.1| CMP-KDO synthetase1 precursor [Zea mays]
gi|7688435|emb|CAB89846.1| CMP-KDO synthetase [Zea mays]
gi|413948462|gb|AFW81111.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Zea mays]
Length = 298
Score = 442 bits (1138), Expect = e-122, Method: Compositional matrix adjust.
Identities = 219/280 (78%), Positives = 243/280 (86%), Gaps = 1/280 (0%)
Query: 15 STKSWIVHGIVAGAAIAVAVGARAYLGRSKNFRSRVVGIIPARFASSRFEGKPLVNILGK 74
+ W++HG+ GAA A A A Y R FRSR VGIIPARFAS+RFEGKPLV ILGK
Sbjct: 19 GARVWVLHGLALGAAAAAAAVAYLY-RRPTGFRSRAVGIIPARFASTRFEGKPLVPILGK 77
Query: 75 PMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKL 134
PMIQRTWER LA++LDH+VVATDDE+IAECC+ FGADVIMTS SC+NG+ERC EAL+KL
Sbjct: 78 PMIQRTWERVMLASSLDHVVVATDDERIAECCRGFGADVIMTSASCKNGSERCCEALKKL 137
Query: 135 EKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVD 194
+K YDIVVNIQGDEPLIEPEIIDGVV +LQ APDAVFSTAVTSLKPEDAFD NRVKCVVD
Sbjct: 138 DKHYDIVVNIQGDEPLIEPEIIDGVVMSLQRAPDAVFSTAVTSLKPEDAFDTNRVKCVVD 197
Query: 195 NHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQ 254
N GYAIYFSRGLIP+NKSG NP++PYLLHLGI +DS FLKIYP L PTPLQ+EEDLEQ
Sbjct: 198 NLGYAIYFSRGLIPFNKSGNANPKYPYLLHLGIAGFDSKFLKIYPELPPTPLQMEEDLEQ 257
Query: 255 LKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFMRERNL 294
LKVLENGY+MKVIKVDH+AHGVDAPEDVEKIE+ MR RN+
Sbjct: 258 LKVLENGYRMKVIKVDHDAHGVDAPEDVEKIEALMRTRNI 297
>gi|195645974|gb|ACG42455.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Zea mays]
Length = 298
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 218/280 (77%), Positives = 242/280 (86%), Gaps = 1/280 (0%)
Query: 15 STKSWIVHGIVAGAAIAVAVGARAYLGRSKNFRSRVVGIIPARFASSRFEGKPLVNILGK 74
+ W++HG+ GAA A A A Y R FRSR VGIIPARFAS+RFEGKPLV ILGK
Sbjct: 19 GARVWVLHGLALGAAAAAAAVAYLY-RRPTGFRSRAVGIIPARFASTRFEGKPLVPILGK 77
Query: 75 PMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKL 134
PMIQRTWER LA++LDH+VVATDDE+IAECC+ FGADVIMTS SC+NG+ERC EAL+KL
Sbjct: 78 PMIQRTWERVMLASSLDHVVVATDDERIAECCRGFGADVIMTSASCKNGSERCCEALKKL 137
Query: 135 EKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVD 194
+K YDIVVNIQGDEPLIEPEIIDGVV +LQ APDAVFSTAVTSLKPEDAFD NRVKC VD
Sbjct: 138 DKHYDIVVNIQGDEPLIEPEIIDGVVMSLQRAPDAVFSTAVTSLKPEDAFDTNRVKCFVD 197
Query: 195 NHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQ 254
N GYAIYFSRGLIP+NKSG NP++PYLLHLGI +DS FLKIYP L PTPLQ+EEDLEQ
Sbjct: 198 NLGYAIYFSRGLIPFNKSGNANPKYPYLLHLGIAGFDSKFLKIYPELPPTPLQMEEDLEQ 257
Query: 255 LKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFMRERNL 294
LKVLENGY+MKVIKVDH+AHGVDAPEDVEKIE+ MR RN+
Sbjct: 258 LKVLENGYRMKVIKVDHDAHGVDAPEDVEKIEALMRTRNI 297
>gi|7688437|emb|CAB89847.1| CMP-KDO synthetase [Zea mays]
Length = 236
Score = 419 bits (1077), Expect = e-115, Method: Compositional matrix adjust.
Identities = 198/236 (83%), Positives = 217/236 (91%)
Query: 54 IPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADV 113
IPARFAS+RFEGKPLV ILGKPMIQRTWER LA++LDH+VVATDDE+IAECC+ FGADV
Sbjct: 1 IPARFASTRFEGKPLVPILGKPMIQRTWERVMLASSLDHVVVATDDERIAECCRGFGADV 60
Query: 114 IMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFST 173
IMTS SC+NG+ERC EAL+KL+K YDIVVNIQGDEPLIEPEIIDGVV +LQ APDAVFST
Sbjct: 61 IMTSASCKNGSERCCEALKKLDKHYDIVVNIQGDEPLIEPEIIDGVVMSLQRAPDAVFST 120
Query: 174 AVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSN 233
AVTSLKPEDAFD NRVKCVVDN GYAIYFSRGLIP+NKSG NP++PYLLHLGI +DS
Sbjct: 121 AVTSLKPEDAFDTNRVKCVVDNLGYAIYFSRGLIPFNKSGNANPKYPYLLHLGIAGFDSK 180
Query: 234 FLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFM 289
FLKIYP L PTPLQ+EEDLEQLKVLENGY+MKVIKVDH+AHGVDAPEDVEKIE+ M
Sbjct: 181 FLKIYPELPPTPLQMEEDLEQLKVLENGYRMKVIKVDHDAHGVDAPEDVEKIEALM 236
>gi|168066036|ref|XP_001784950.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663497|gb|EDQ50258.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 290
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 194/284 (68%), Positives = 232/284 (81%), Gaps = 1/284 (0%)
Query: 12 SSSSTKSWIVHGIVAGAAIAVAVGARAYLGRSK-NFRSRVVGIIPARFASSRFEGKPLVN 70
SSSS +VH VA AI +A Y R++ R RVVG+IPARF SSRFEGKPLV+
Sbjct: 6 SSSSLAPLLVHAAVAAGAITIAAALNHYWFRARLKARPRVVGVIPARFKSSRFEGKPLVH 65
Query: 71 ILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEA 130
I+GKPMIQRTWE++ T+L +VVATDD++IA+CC+ FGADV+MTSE+C+NGTERCNEA
Sbjct: 66 IMGKPMIQRTWEQAMKCTSLQAIVVATDDDRIADCCRGFGADVVMTSENCQNGTERCNEA 125
Query: 131 LQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVK 190
L+KL KYDIVVNIQGDEPLIEP IIDG+V ALQ PDAV+STAVT LKPEDA DPNRVK
Sbjct: 126 LEKLAAKYDIVVNIQGDEPLIEPAIIDGIVLALQMCPDAVYSTAVTGLKPEDASDPNRVK 185
Query: 191 CVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEE 250
C+VD +GYA+YFSRGL+P NK G NP FPY+LHLG+Q YD+ FLK+Y + P+PLQLEE
Sbjct: 186 CIVDKNGYALYFSRGLLPSNKKGIPNPDFPYMLHLGVQCYDAKFLKVYASMPPSPLQLEE 245
Query: 251 DLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFMRERNL 294
DLEQLKVLENG+K+KVIKVDHEAHGVD P D+ K+E+ MR ++
Sbjct: 246 DLEQLKVLENGFKLKVIKVDHEAHGVDTPGDIAKVEAVMRAHHM 289
>gi|302798715|ref|XP_002981117.1| hypothetical protein SELMODRAFT_113793 [Selaginella moellendorffii]
gi|300151171|gb|EFJ17818.1| hypothetical protein SELMODRAFT_113793 [Selaginella moellendorffii]
Length = 255
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 186/250 (74%), Positives = 222/250 (88%), Gaps = 1/250 (0%)
Query: 47 RSRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECC 106
RSRVVGIIPAR+ASSRF+GKPL ILGKPMIQRTWE+++LA TLD LVVATDDE+I +CC
Sbjct: 6 RSRVVGIIPARYASSRFQGKPLALILGKPMIQRTWEQARLAKTLDALVVATDDERIRQCC 65
Query: 107 QQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKAL-QA 165
++FGA+V+MTSE C NGTERCNEA++KL++K+DIVVNIQGDEPLI+P+IIDGVV AL QA
Sbjct: 66 EEFGAEVVMTSEKCPNGTERCNEAVKKLKRKFDIVVNIQGDEPLIDPDIIDGVVMALKQA 125
Query: 166 APDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHL 225
+PDA+ STAVTSLKP+DA D NRVKC+VD GYAIYFSRGL+P+NK G N +FPYLLHL
Sbjct: 126 SPDAMCSTAVTSLKPQDASDTNRVKCIVDKQGYAIYFSRGLLPFNKKGVANDKFPYLLHL 185
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKI 285
GIQ YD++FL +YP + PT LQLEEDLEQLKV+ENGYK+KVIKVDH+AHGVD+P D+ I
Sbjct: 186 GIQCYDAHFLSMYPLIAPTALQLEEDLEQLKVIENGYKIKVIKVDHDAHGVDSPGDIASI 245
Query: 286 ESFMRERNLS 295
ES MR RN++
Sbjct: 246 ESLMRGRNIA 255
>gi|302801664|ref|XP_002982588.1| hypothetical protein SELMODRAFT_116934 [Selaginella moellendorffii]
gi|300149687|gb|EFJ16341.1| hypothetical protein SELMODRAFT_116934 [Selaginella moellendorffii]
Length = 254
Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust.
Identities = 183/249 (73%), Positives = 221/249 (88%)
Query: 47 RSRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECC 106
RSRVVGIIPAR+ASSRF+GKPL ILGKPMIQRTWE+++LA TLD LVVATDDE+I +CC
Sbjct: 6 RSRVVGIIPARYASSRFQGKPLALILGKPMIQRTWEQARLAKTLDALVVATDDERIRQCC 65
Query: 107 QQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAA 166
++FGA+V+MTSE C NGTERCNEA+++L++K+DIVVNIQGDEPLI+P+IIDGVV AL+A+
Sbjct: 66 EEFGAEVVMTSEKCPNGTERCNEAVKRLKRKFDIVVNIQGDEPLIDPDIIDGVVMALKAS 125
Query: 167 PDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLG 226
PDA+ STAVTSLKP+DA D NRVKC+VD GYAIYFSRGL+P+NK G N +FPYLLHLG
Sbjct: 126 PDAMCSTAVTSLKPQDASDTNRVKCIVDKQGYAIYFSRGLLPFNKKGVANDKFPYLLHLG 185
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIE 286
IQ YD++FL +YP + PT LQLEEDLEQLKV+ENGYK+KVI VDH+AHGVD+P D+ IE
Sbjct: 186 IQCYDAHFLSMYPLIAPTALQLEEDLEQLKVIENGYKIKVINVDHDAHGVDSPGDIASIE 245
Query: 287 SFMRERNLS 295
S MR RN++
Sbjct: 246 SLMRGRNIA 254
>gi|413948463|gb|AFW81112.1| hypothetical protein ZEAMMB73_836886 [Zea mays]
Length = 280
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/251 (77%), Positives = 216/251 (86%), Gaps = 1/251 (0%)
Query: 15 STKSWIVHGIVAGAAIAVAVGARAYLGRSKNFRSRVVGIIPARFASSRFEGKPLVNILGK 74
+ W++HG+ GAA A A A Y R FRSR VGIIPARFAS+RFEGKPLV ILGK
Sbjct: 19 GARVWVLHGLALGAAAAAAAVAYLYR-RPTGFRSRAVGIIPARFASTRFEGKPLVPILGK 77
Query: 75 PMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKL 134
PMIQRTWER LA++LDH+VVATDDE+IAECC+ FGADVIMTS SC+NG+ERC EAL+KL
Sbjct: 78 PMIQRTWERVMLASSLDHVVVATDDERIAECCRGFGADVIMTSASCKNGSERCCEALKKL 137
Query: 135 EKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVD 194
+K YDIVVNIQGDEPLIEPEIIDGVV +LQ APDAVFSTAVTSLKPEDAFD NRVKCVVD
Sbjct: 138 DKHYDIVVNIQGDEPLIEPEIIDGVVMSLQRAPDAVFSTAVTSLKPEDAFDTNRVKCVVD 197
Query: 195 NHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQ 254
N GYAIYFSRGLIP+NKSG NP++PYLLHLGI +DS FLKIYP L PTPLQ+EEDLEQ
Sbjct: 198 NLGYAIYFSRGLIPFNKSGNANPKYPYLLHLGIAGFDSKFLKIYPELPPTPLQMEEDLEQ 257
Query: 255 LKVLENGYKMK 265
LKVLENGY+MK
Sbjct: 258 LKVLENGYRMK 268
>gi|223949725|gb|ACN28946.1| unknown [Zea mays]
Length = 202
Score = 334 bits (857), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 157/190 (82%), Positives = 173/190 (91%)
Query: 76 MIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE 135
MIQRTWER LA++LDH+VVATDDE+IAECC+ FGADVIMTS SC+NG+ERC EAL+KL+
Sbjct: 1 MIQRTWERVMLASSLDHVVVATDDERIAECCRGFGADVIMTSASCKNGSERCCEALKKLD 60
Query: 136 KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDN 195
K YDIVVNIQGDEPLIEPEIIDGVV +LQ APDAVFSTAVTSLKPEDAFD NRVKCVVDN
Sbjct: 61 KHYDIVVNIQGDEPLIEPEIIDGVVMSLQRAPDAVFSTAVTSLKPEDAFDTNRVKCVVDN 120
Query: 196 HGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQL 255
GYAIYFSRGLIP+NKSG NP++PYLLHLGI +DS FLKIYP L PTPLQ+EEDLEQL
Sbjct: 121 LGYAIYFSRGLIPFNKSGNANPKYPYLLHLGIAGFDSKFLKIYPELPPTPLQMEEDLEQL 180
Query: 256 KVLENGYKMK 265
KVLENGY+MK
Sbjct: 181 KVLENGYRMK 190
>gi|307102701|gb|EFN50970.1| hypothetical protein CHLNCDRAFT_33280 [Chlorella variabilis]
Length = 303
Score = 319 bits (817), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 166/293 (56%), Positives = 205/293 (69%), Gaps = 9/293 (3%)
Query: 11 ESSSSTKSWIVHGIVAGAAIAVAVGA---RAYLGRSKNFRSRVVGIIPARFASSRFEGKP 67
E S++ + ++A A AV VG+ L + R RVVG++PAR+ SSRF GKP
Sbjct: 10 EQKSASNQSLGGALLAYALGAVTVGSVMLARALRKKLRRRRRVVGVLPARYQSSRFPGKP 69
Query: 68 LVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERC 127
LV ILGKPMI RT+E++ A TLD +VVATDDE+IAE C+ GA +MT C NGTERC
Sbjct: 70 LVPILGKPMILRTYEQACKAQTLDAVVVATDDERIAEACRAAGAQAVMTHPDCPNGTERC 129
Query: 128 NEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPN 187
EA+ KL K+YDIV+NIQGDEPLIEPE+ID VV+ALQ +PDAV+STA T L +
Sbjct: 130 EEAVSKLSKQYDIVLNIQGDEPLIEPEVIDAVVRALQESPDAVYSTACTPLAHSEVELRQ 189
Query: 188 RVKCVVDNHGYAIYFSRGLIPYNKSGKVNP------QFPYLLHLGIQSYDSNFLKIYPGL 241
RVKC+ D GYAIYFSRG++P NK G+V PYLLHLG+Q YD FL+ Y +
Sbjct: 190 RVKCITDTSGYAIYFSRGVLPSNKDGEVRSYPAPWHDKPYLLHLGLQCYDRAFLRQYCKM 249
Query: 242 HPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFMRERNL 294
TPLQ+ EDLEQLK+LENGY+MKV+ VDH AHGVD PEDV IE+ M ++ L
Sbjct: 250 AATPLQMMEDLEQLKILENGYRMKVVVVDHSAHGVDLPEDVASIEAIMGQQRL 302
>gi|384250170|gb|EIE23650.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Coccomyxa
subellipsoidea C-169]
Length = 284
Score = 315 bits (808), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 159/261 (60%), Positives = 191/261 (73%), Gaps = 6/261 (2%)
Query: 41 GRSKNFRSRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDE 100
G + R RVVG+IPAR+ S RF GKPLV+ILGKPM+ RTWE++ ATTL +VVATDDE
Sbjct: 24 GLLQRKRLRVVGVIPARYQSVRFPGKPLVSILGKPMVVRTWEQASKATTLQKVVVATDDE 83
Query: 101 KIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVV 160
+IA C+ GA+V+MTS C NGT RC+EA+ KL +YDIV+NIQGDEPLIEP+IID V
Sbjct: 84 RIASACRDAGAEVVMTSSECPNGTVRCHEAVTKLLGEYDIVINIQGDEPLIEPQIIDDCV 143
Query: 161 KALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNP--- 217
+ALQ +P +V+STA T L+ E RVKC+VD G+A+YFSRG++P NK G V P
Sbjct: 144 RALQNSPTSVYSTACTPLEHEHVEHRTRVKCIVDCDGHAMYFSRGMLPANKDGVVRPFPA 203
Query: 218 ---QFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAH 274
PYLLHLG+ +D FL Y + PTPL L EDLEQLKVLENGYK+KVI VDH+AH
Sbjct: 204 PFQHQPYLLHLGLACFDRAFLAQYCRMPPTPLMLMEDLEQLKVLENGYKIKVIVVDHKAH 263
Query: 275 GVDAPEDVEKIESFMRERNLS 295
GVD PEDV IE MRE LS
Sbjct: 264 GVDEPEDVAVIEQKMRELGLS 284
>gi|412985110|emb|CCO20135.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bathycoccus
prasinos]
Length = 321
Score = 304 bits (779), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 149/246 (60%), Positives = 189/246 (76%), Gaps = 1/246 (0%)
Query: 47 RSRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECC 106
R++V+G+IPAR+AS+RF GKPLV I GKPMI RT+ ++K A+ LD LVVATDDE+I +
Sbjct: 71 RTKVLGVIPARYASTRFPGKPLVMIAGKPMIVRTYLQAKKASQLDALVVATDDERIRDAI 130
Query: 107 QQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAA 166
+ G DV+MT E+ NGTERC +A + +YDIVVNIQGDEPLIEPEIID VV AL+ A
Sbjct: 131 VKAGGDVVMTDEAIPNGTERCAQAADRTAGEYDIVVNIQGDEPLIEPEIIDEVVLALKNA 190
Query: 167 P-DAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHL 225
P + V+ST VT LK E+ RVKC+ D +GYAIYFSRG++P NK G+V+ F Y LHL
Sbjct: 191 PRECVYSTPVTPLKHEEVKMQGRVKCITDVNGYAIYFSRGMLPNNKKGEVDTSFDYWLHL 250
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKI 285
G+Q YD FLK++P + TP+Q++EDLEQLKV+ENGYK+KVI+V+H AHGVD PEDV I
Sbjct: 251 GLQCYDREFLKLFPIMPATPMQMQEDLEQLKVIENGYKIKVIRVNHCAHGVDEPEDVASI 310
Query: 286 ESFMRE 291
E + E
Sbjct: 311 EKIIAE 316
>gi|297621333|ref|YP_003709470.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Waddlia
chondrophila WSU 86-1044]
gi|297376634|gb|ADI38464.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Waddlia
chondrophila WSU 86-1044]
Length = 245
Score = 234 bits (596), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 122/239 (51%), Positives = 155/239 (64%), Gaps = 1/239 (0%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
R++G+IPAR+ SSRF GKPLV I GK +IQRT+E ++ L + VATDD++I ++
Sbjct: 4 RIIGMIPARYGSSRFPGKPLVEISGKSLIQRTYENAQRCKLLQEIYVATDDDRIFSHVEE 63
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG IMTS +C GTER EA+ K D+++NIQGDEPL+EP +I V + L
Sbjct: 64 FGGKAIMTSSNCPTGTERLAEAIHLNFKNVDMIINIQGDEPLLEPYVIQKVGEILINDQS 123
Query: 169 AVFSTAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
AV STA + E+A + KCV+D HG A+YFSR LIP SGK P Y HLGI
Sbjct: 124 AVMSTAAVKISTEEEALSRSVNKCVIDAHGNALYFSRSLIPGGHSGKWEPDTTYYKHLGI 183
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIE 286
Y +FL Y L TPLQL EDLEQLKVLE+G+K+KV VD + GVD PED+ K+E
Sbjct: 184 YGYRKDFLFHYAELETTPLQLAEDLEQLKVLEHGFKIKVAVVDSHSIGVDTPEDLIKVE 242
>gi|337293557|emb|CCB91546.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Waddlia
chondrophila 2032/99]
Length = 245
Score = 234 bits (596), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 122/239 (51%), Positives = 155/239 (64%), Gaps = 1/239 (0%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
R++G+IPAR+ SSRF GKPLV I GK +IQRT+E ++ L + VATDD++I ++
Sbjct: 4 RIIGMIPARYGSSRFPGKPLVEISGKSLIQRTYENAQRCKLLQEIYVATDDDRIFSHVEE 63
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG IMTS +C GTER EA+ K D+++NIQGDEPL+EP +I V + L
Sbjct: 64 FGGKAIMTSSNCPTGTERLAEAIHLNFKNVDMIINIQGDEPLLEPYVIQKVGEILINDQS 123
Query: 169 AVFSTAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
AV STA + E+A + KCV+D HG A+YFSR LIP SGK P Y HLGI
Sbjct: 124 AVMSTAAVKINTEEEALSRSVNKCVIDAHGNALYFSRSLIPGGHSGKWEPDTTYYKHLGI 183
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIE 286
Y +FL Y L TPLQL EDLEQLKVLE+G+K+KV VD + GVD PED+ K+E
Sbjct: 184 YGYRKDFLFHYAELETTPLQLAEDLEQLKVLEHGFKIKVAVVDSHSIGVDTPEDLIKVE 242
>gi|46446459|ref|YP_007824.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Candidatus
Protochlamydia amoebophila UWE25]
gi|81627240|sp|Q6MD00.1|KDSB_PARUW RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|46400100|emb|CAF23549.1| probable 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO
synthetase) [Candidatus Protochlamydia amoebophila
UWE25]
Length = 259
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 121/248 (48%), Positives = 159/248 (64%), Gaps = 3/248 (1%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+++GIIPAR+ S+RF GKPL +ILGK ++QRT+E S A+ L L+VATDDE+I E +
Sbjct: 9 QIIGIIPARYGSTRFPGKPLASILGKTLLQRTYENSLRASALSDLIVATDDERIFEHVRS 68
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEK--KYDIVVNIQGDEPLIEPEIIDGVVKALQAA 166
F V+MTSE C GT+R E L + +VNIQGDEP + P I+ V+AL
Sbjct: 69 FNGKVVMTSEQCPTGTDRLAEVLSLYPEWMHATAIVNIQGDEPCLNPLTINLAVQALVND 128
Query: 167 PDAVFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHL 225
P ST VT L E+A + + VKCV+D G A+YFSR LIP NK+ Y HL
Sbjct: 129 PQGQVSTIVTPLLDEEEAKNSSIVKCVMDQQGNALYFSRALIPSNKTNSFKNGAIYFRHL 188
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKI 285
G+ Y +F+ Y L TPLQLEEDLEQLKVLE+GY++KV VD GVD PED+ K+
Sbjct: 189 GLYVYRPSFIINYQKLPSTPLQLEEDLEQLKVLEHGYRIKVAIVDQANIGVDTPEDIHKV 248
Query: 286 ESFMRERN 293
E ++ ++N
Sbjct: 249 EEWLCKQN 256
>gi|338175618|ref|YP_004652428.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Parachlamydia
acanthamoebae UV-7]
gi|336479976|emb|CCB86574.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Parachlamydia
acanthamoebae UV-7]
Length = 264
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 116/250 (46%), Positives = 160/250 (64%), Gaps = 3/250 (1%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+V+GIIPAR S R GK L+ I GK +IQRT+E + LD L+VATD + I E Q
Sbjct: 6 QVIGIIPARLKSERLPGKLLIPIAGKTLIQRTYENALRCKLLDDLIVATDSQSILEHVQS 65
Query: 109 FGADVIMTSESCRNGTERCNE--ALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAA 166
FG +TSE+CRNGT+R E L +K V+NIQGDEP +EPE+I V++ LQ+
Sbjct: 66 FGGKAYLTSENCRNGTDRLAEVLTLNPTLQKIPFVINIQGDEPFLEPEVIQKVIEGLQSD 125
Query: 167 PDAVFSTAVTSLKPED-AFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHL 225
+ ST +T ++ E+ A D + VKCV G A+YFSR LIP +K P+ Y H+
Sbjct: 126 KQIMVSTPITPIQTEEEALDSSVVKCVRRQDGDALYFSRALIPSSKKQGYQPETRYYRHI 185
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKI 285
G+ Y ++FL +Y L TPLQL EDLEQLK+LE+GY++K + VD + GVD P D++K+
Sbjct: 186 GVYGYRTDFLLLYTKLPSTPLQLSEDLEQLKILEHGYRIKTVVVDSISIGVDEPADIKKV 245
Query: 286 ESFMRERNLS 295
E + ++N S
Sbjct: 246 EYLLCKQNTS 255
>gi|282889571|ref|ZP_06298112.1| hypothetical protein pah_c002o003 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281500494|gb|EFB42772.1| hypothetical protein pah_c002o003 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 264
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 116/250 (46%), Positives = 159/250 (63%), Gaps = 3/250 (1%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+V+GIIPAR S R GK L+ I GK +IQRT+E + LD L+VATD I E Q
Sbjct: 6 QVIGIIPARLKSERLPGKLLIPIAGKTLIQRTYENALRCKLLDDLIVATDSPSILEHVQS 65
Query: 109 FGADVIMTSESCRNGTERCNE--ALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAA 166
FG +TSE+CRNGT+R E L +K V+NIQGDEP +EPE+I V++ LQ+
Sbjct: 66 FGGKAYLTSENCRNGTDRLAEVLTLNPTLQKIPFVINIQGDEPFLEPEVIQKVIEGLQSD 125
Query: 167 PDAVFSTAVTSLKPED-AFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHL 225
+ ST +T ++ E+ A D + VKCV G A+YFSR LIP +K P+ Y H+
Sbjct: 126 KQIMVSTPITPIQTEEEALDSSVVKCVRRQDGDALYFSRALIPSSKKQGYQPETRYYRHI 185
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKI 285
G+ Y ++FL +Y L TPLQL EDLEQLK+LE+GY++K + VD + GVD P D++K+
Sbjct: 186 GVYGYRTDFLLLYTKLPSTPLQLSEDLEQLKILEHGYRIKTVVVDSISIGVDEPADIKKV 245
Query: 286 ESFMRERNLS 295
E + ++N S
Sbjct: 246 EYLLCKQNTS 255
>gi|295112278|emb|CBL29028.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Synergistetes
bacterium SGP1]
Length = 249
Score = 216 bits (551), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 114/247 (46%), Positives = 155/247 (62%), Gaps = 6/247 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+++G+IPAR+ASSR GKPL +I GKPMIQ +ER+ A L + VATDDE+IA +
Sbjct: 5 KILGVIPARYASSRLPGKPLADICGKPMIQHVYERTMAARRLTSVAVATDDERIASAVRA 64
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG +MTS NGT R EAL+ L D VVN+QGDEPL++P ID V AL P
Sbjct: 65 FGGCAVMTSPDHPNGTSRAEEALRILAPDADAVVNVQGDEPLLDPATIDEVA-ALLDEPG 123
Query: 169 AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQ 228
F+T + D +PN VK V+D +G A+YFSR LIPY ++ P+ P H+G+
Sbjct: 124 VSFATLCRPMADADRDNPNAVKVVMDQNGDALYFSRSLIPYPRN---KPRLPVYCHIGLY 180
Query: 229 SYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKM--KVIKVDHEAHGVDAPEDVEKIE 286
+Y ++FL+ Y L TPL E LEQLK LE+G+++ KV E GVD ED+E++
Sbjct: 181 AYTADFLRHYAVLPMTPLAEAESLEQLKALEHGHRLRVKVTASSAEGVGVDTQEDLERVR 240
Query: 287 SFMRERN 293
+ +RER+
Sbjct: 241 TILRERS 247
>gi|302392916|ref|YP_003828736.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Acetohalobium
arabaticum DSM 5501]
gi|302204993|gb|ADL13671.1| 3-deoxy-D-manno-octulosonatecytidylyltransferase [Acetohalobium
arabaticum DSM 5501]
Length = 248
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 108/244 (44%), Positives = 160/244 (65%), Gaps = 5/244 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+VVGIIPAR+ S+R GKPL++I G+PMIQ ++R+ A D ++VATDDE+I E +
Sbjct: 5 QVVGIIPARYGSTRLPGKPLLDICGEPMIQHVYKRAAEAEVFDRVIVATDDERIKERVEN 64
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG + +MTS + GT+R EA +++E DI+VNIQGDEPLI P +I+ +V L
Sbjct: 65 FGGEAVMTSTEHKTGTDRLAEAARRIEA--DIIVNIQGDEPLISPAMIEELVYPLLVDST 122
Query: 169 AVFSTAVTSLK-PEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
V ST +K E+ +P+ VK V D GYA+YFSR IPY ++ + + +F H+G+
Sbjct: 123 LVMSTLKQEIKDQEEVNNPDLVKVVTDKEGYALYFSRSPIPYLRNQETDSKF--YKHIGL 180
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
+Y +FL + L TPL+ E LEQL+ LENGY++KV++ +H + GVD ED++++ +
Sbjct: 181 YAYQKSFLLKFAKLEATPLEQAESLEQLRALENGYRIKVVETEHASIGVDTEEDLKRVRN 240
Query: 288 FMRE 291
M E
Sbjct: 241 VMEE 244
>gi|315917236|ref|ZP_07913476.1| CMP-2-keto-3-deoxyoctulosonic acid synthetase [Fusobacterium
gonidiaformans ATCC 25563]
gi|317058671|ref|ZP_07923156.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Fusobacterium sp.
3_1_5R]
gi|313684347|gb|EFS21182.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Fusobacterium sp.
3_1_5R]
gi|313691111|gb|EFS27946.1| CMP-2-keto-3-deoxyoctulosonic acid synthetase [Fusobacterium
gonidiaformans ATCC 25563]
Length = 247
Score = 214 bits (544), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 110/247 (44%), Positives = 158/247 (63%), Gaps = 5/247 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +G+IPAR+AS+R EGKPL +I G MI+ + R K T LD ++VATDDE+I ++
Sbjct: 2 KFLGVIPARYASTRLEGKPLKDICGHSMIEWVYRRCK-NTKLDDVIVATDDERIFREVER 60
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG VIMTS NGT R E QK+ YD+++NIQGDEPLIE ++ID +V A Q
Sbjct: 61 FGGKVIMTSTEHSNGTSRIAEVCQKI-TDYDVIINIQGDEPLIEADMIDMIVDAFQQEEL 119
Query: 169 AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQ 228
+ + ED +PN+VK V D + YA+YFSR ++PY + ++ Y H+GI
Sbjct: 120 CMCTLKHKLDSWEDIENPNQVKVVTDKNDYALYFSRSILPYPRKENIDL---YYKHIGIY 176
Query: 229 SYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESF 288
Y NF+ Y + TPL+ E LEQL+VLENGY++KV++ H++ GVD ED+EK+ +
Sbjct: 177 GYTRNFVLEYAAMASTPLESSESLEQLRVLENGYQIKVLETSHQSVGVDTQEDLEKVCKW 236
Query: 289 MRERNLS 295
+ ER ++
Sbjct: 237 IEERGIT 243
>gi|284049015|ref|YP_003399354.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Acidaminococcus
fermentans DSM 20731]
gi|283953236|gb|ADB48039.1| 3-deoxy-D-manno-octulosonatecytidylyltransferase [Acidaminococcus
fermentans DSM 20731]
Length = 248
Score = 214 bits (544), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 105/236 (44%), Positives = 152/236 (64%), Gaps = 3/236 (1%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+V+ +IPAR+ S+R GKPL I GKP+IQR +ER+ LA D ++VATDD++I +C
Sbjct: 2 KVLCVIPARYGSTRLPGKPLALIHGKPVIQRVYERAALARIPDEVLVATDDQRILDCVHS 61
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG +MT+E +GT+R E E D++VN+QGDEP+I P++ID + +A PD
Sbjct: 62 FGGRAVMTAEDHPSGTDRLAEVALNFED-VDVIVNVQGDEPMIPPQVIDDLAQAFAENPD 120
Query: 169 AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQ 228
+T T + PED +PN VK V D +GYA+YFSR LIPY ++ + P+ H+GI
Sbjct: 121 LEMATCKTEMNPEDYQNPNAVKVVTDQNGYALYFSRSLIPYPRNEE--PEVKVWKHIGIY 178
Query: 229 SYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEK 284
+Y +FL + L PTPL+ E LEQL+ LENG K+KV+ D + G+D D+++
Sbjct: 179 AYRRDFLLKFAALLPTPLERVEGLEQLRALENGVKIKVLATDFQGVGIDTQADLDR 234
>gi|312897540|ref|ZP_07756960.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Megasphaera
micronuciformis F0359]
gi|310621392|gb|EFQ04932.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Megasphaera
micronuciformis F0359]
Length = 245
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 111/245 (45%), Positives = 154/245 (62%), Gaps = 3/245 (1%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ + IIP+RFAS+R GKPL+++ GKPMIQR +E++ AT VVATDD +I +
Sbjct: 2 KFICIIPSRFASTRLPGKPLIDLAGKPMIQRVYEQACKATKTSGTVVATDDPRIYDKVMS 61
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG +MT ++ NGT R EA+ + + +V+N+QGDEPLI PE+ID + +A + D
Sbjct: 62 FGGQAVMTDKNHENGTARLAEAVGHYKDAH-VVINVQGDEPLIAPEVIDALCQAFEEDAD 120
Query: 169 AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQ 228
+T T L+PE+ D VK VV+ A+YFSR LIPY + PY H+GI
Sbjct: 121 LQMATVATPLQPEEYDDKGAVKVVVNKRDEAMYFSRSLIPYPRHDYTVQHGPYK-HIGIY 179
Query: 229 SYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKI-ES 287
+Y FL Y + TPL+ E LEQL+VLENGYK+KVIK H G+D PEDV+++ E
Sbjct: 180 AYRRAFLLEYANMEVTPLEATESLEQLRVLENGYKIKVIKTTHTFIGIDTPEDVDRVREY 239
Query: 288 FMRER 292
F +E+
Sbjct: 240 FAKEK 244
>gi|365839242|ref|ZP_09380487.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Anaeroglobus
geminatus F0357]
gi|364565270|gb|EHM43002.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Anaeroglobus
geminatus F0357]
Length = 245
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 111/245 (45%), Positives = 152/245 (62%), Gaps = 2/245 (0%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ V IIP+R+AS+R GKPLV+I GKPMIQR +E++ A + VVATD+ +I +
Sbjct: 2 KFVCIIPSRYASTRLPGKPLVDIAGKPMIQRVYEQANKAEKPEVTVVATDNPRIYDVVTA 61
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG +MT E +NGT+R EA+ D+VVN+QGDEPLI P++ID + +A +A
Sbjct: 62 FGGRAVMTREDHKNGTDRLAEAVGYYADA-DVVVNVQGDEPLISPDVIDALCEAFEADSA 120
Query: 169 AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQ 228
+T L PE+ D + VK V++ G A+YFSR LIPY + PY H+G
Sbjct: 121 LEMATVAVPLAPEEYEDKSAVKVVMNCRGEALYFSRSLIPYPRHDFTKKNRPY-KHIGFY 179
Query: 229 SYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESF 288
+Y +FL Y + P+PL+ E LEQL+VLENGYK+KVIK H GVD PEDV +I +
Sbjct: 180 AYKRDFLLQYAAMAPSPLEEAESLEQLRVLENGYKIKVIKTGHSFIGVDTPEDVVRIREY 239
Query: 289 MRERN 293
+ N
Sbjct: 240 FAKEN 244
>gi|338813624|ref|ZP_08625722.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Acetonema longum
DSM 6540]
gi|337274392|gb|EGO62931.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Acetonema longum
DSM 6540]
Length = 242
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 103/244 (42%), Positives = 153/244 (62%), Gaps = 3/244 (1%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+++ +IPAR+AS+R GKPL +I GKPMI+ +ER LA D ++VATD + + +Q
Sbjct: 2 KILCVIPARYASTRLPGKPLADIAGKPMIRHVYERVSLAKRPDRVLVATDHSLVLQAVEQ 61
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG V++TS + GT+R E +D+V+N+QGDEPLIEP +ID + A PD
Sbjct: 62 FGGQVMLTSPAHPTGTDRLAEVAVSF-PDFDVVINVQGDEPLIEPSVIDNLAAAFDRDPD 120
Query: 169 AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQ 228
+ +T T L + P+ VK V D +GYA+YFSR L+PY ++ N + H+GI
Sbjct: 121 LLMATLKTRLAESEYQVPSVVKVVTDLNGYALYFSRSLVPYPRAASGNTT--WYKHIGIY 178
Query: 229 SYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESF 288
+Y +FL Y TPL+ E LEQL+ LE+GY++KV++ D ++ GVD PED+ K+ +
Sbjct: 179 AYRRDFLLRYASFSATPLEQAESLEQLRALEHGYRIKVLETDFQSVGVDTPEDLAKVNAL 238
Query: 289 MRER 292
+R R
Sbjct: 239 LRAR 242
>gi|340751619|ref|ZP_08688429.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Fusobacterium
mortiferum ATCC 9817]
gi|229420583|gb|EEO35630.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Fusobacterium
mortiferum ATCC 9817]
Length = 246
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 108/247 (43%), Positives = 163/247 (65%), Gaps = 6/247 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +G+IP+R+AS+R EGKPL +I G MI+ ++R+KL+ LD +VVATDDE+I + ++
Sbjct: 2 KFLGVIPSRYASTRLEGKPLKDICGHTMIEWVYKRTKLSN-LDEVVVATDDERIYKEVER 60
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG I+TS+ NGT R E K E YD++VN+QGDEPLIEPE+I+ ++ + +
Sbjct: 61 FGGKAILTSKEHENGTSRIAEVCTKYED-YDVIVNVQGDEPLIEPEMINSIINSFKEDDT 119
Query: 169 AVFSTAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
ST + E+ +PN VK + D GYA+YFSR +IPY + K++ Q Y H+GI
Sbjct: 120 ISMSTLKYKIDTMEEIENPNYVKVITDKKGYALYFSRSVIPYPR--KLDIQ-NYYKHVGI 176
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
Y +F+ Y + PTPL+L E LEQL+ LENGY++KV++ ++ GVD E++EK+
Sbjct: 177 YGYKRDFVVEYAKMEPTPLELSESLEQLRALENGYRIKVMETPYKIIGVDTQEELEKVRE 236
Query: 288 FMRERNL 294
+++E L
Sbjct: 237 YIKENGL 243
>gi|423725183|ref|ZP_17699323.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Parabacteroides
merdae CL09T00C40]
gi|409234811|gb|EKN27635.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Parabacteroides
merdae CL09T00C40]
Length = 261
Score = 211 bits (537), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 113/252 (44%), Positives = 158/252 (62%), Gaps = 11/252 (4%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR+AS+RF GKPL ++ GKPMIQR +E ++ LD + VATDD +I Q
Sbjct: 2 KFIGIIPARYASTRFPGKPLADLAGKPMIQRVYE--QVQNVLDSVCVATDDNRIEAAVQA 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG +VIMTS+ ++GT+RC EA K+ YD+VVNIQGDEP I+PE I+ ++KA
Sbjct: 60 FGGNVIMTSDQHKSGTDRCYEAYCKIGDGYDVVVNIQGDEPFIQPEQIE-ILKACFIDDS 118
Query: 169 AVFSTAVTSLKPED-----AFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP--- 220
+T V +P+D F+ N K V++ A+YFSR +IPY + K P
Sbjct: 119 IQIATLVKPFRPDDDFETTLFNANSPKVVLNKKNEAMYFSRSIIPYMRGRKYTEWLPNHT 178
Query: 221 YLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPE 280
Y H+G+ +Y ++ LK L +PL+L E LEQL+ LENGYK+KV E G+D PE
Sbjct: 179 YYKHIGLYAYRADTLKEITHLPQSPLELAESLEQLRWLENGYKIKVGITQQETIGIDTPE 238
Query: 281 DVEKIESFMRER 292
D+EK +F++ R
Sbjct: 239 DMEKALAFLKNR 250
>gi|154494955|ref|ZP_02033960.1| hypothetical protein PARMER_04001 [Parabacteroides merdae ATCC
43184]
gi|423348311|ref|ZP_17325995.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Parabacteroides
merdae CL03T12C32]
gi|154085505|gb|EDN84550.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Parabacteroides
merdae ATCC 43184]
gi|409214413|gb|EKN07423.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Parabacteroides
merdae CL03T12C32]
Length = 261
Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 113/252 (44%), Positives = 158/252 (62%), Gaps = 11/252 (4%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR+AS+RF GKPL ++ GKPMIQR +E ++ LD + VATDD +I Q
Sbjct: 2 KFIGIIPARYASTRFPGKPLADLAGKPMIQRVYE--QVQNVLDAVCVATDDNRIEAAVQA 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG +VIMTS+ ++GT+RC EA K+ YD+VVNIQGDEP I+PE I+ ++KA
Sbjct: 60 FGGNVIMTSDQHKSGTDRCYEAYCKIGDGYDVVVNIQGDEPFIQPEQIE-ILKACFIDDS 118
Query: 169 AVFSTAVTSLKPED-----AFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP--- 220
+T V +P+D F+ N K V++ A+YFSR +IPY + K P
Sbjct: 119 IQIATLVKPFRPDDDFETTLFNANSPKVVLNKKNEAMYFSRSIIPYMRGRKYTEWLPNHT 178
Query: 221 YLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPE 280
Y H+G+ +Y ++ LK L +PL+L E LEQL+ LENGYK+KV E G+D PE
Sbjct: 179 YYKHIGLYAYRADTLKEITHLPQSPLELAESLEQLRWLENGYKIKVGITQQETIGIDTPE 238
Query: 281 DVEKIESFMRER 292
D+EK +F++ R
Sbjct: 239 DMEKALAFLKNR 250
>gi|227824363|ref|ZP_03989195.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Acidaminococcus
sp. D21]
gi|226904862|gb|EEH90780.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Acidaminococcus
sp. D21]
Length = 259
Score = 210 bits (535), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 105/236 (44%), Positives = 150/236 (63%), Gaps = 3/236 (1%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+V+ +IPAR+AS+R GKPL N+ GKPMIQR +ER+ A D ++VATDDE+I E +
Sbjct: 2 KVLCVIPARYASTRLPGKPLANLAGKPMIQRVYERAAQAKIPDEIIVATDDERIKETVEG 61
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG +MT+ + +GT+R E + K D+++N+QGDEP+I PE+ID + +A +
Sbjct: 62 FGGKAMMTAATHPSGTDRLAEVALSYD-KVDVIINVQGDEPMIPPELIDSLCEAFENNDQ 120
Query: 169 AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQ 228
+TA T + + DPN VK V D GYAIYFSR LIPY + P+F H+GI
Sbjct: 121 LQMATAKTLMDASEYDDPNAVKVVTDQSGYAIYFSRSLIPYPRHK--TPEFKVYKHIGIY 178
Query: 229 SYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEK 284
+Y +FL + L PTPL+ E LEQL+ LE G K+KV+ D + G+D ED+++
Sbjct: 179 AYRRDFLLKFAALLPTPLEQIEGLEQLRALETGAKIKVLTTDFKGIGIDTQEDLDR 234
>gi|254303829|ref|ZP_04971187.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Fusobacterium
nucleatum subsp. polymorphum ATCC 10953]
gi|148324021|gb|EDK89271.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Fusobacterium
nucleatum subsp. polymorphum ATCC 10953]
Length = 245
Score = 210 bits (535), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 109/247 (44%), Positives = 158/247 (63%), Gaps = 6/247 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR++S+R EGKPL I G MI+ ++R+K + LD L+VATDDE+I
Sbjct: 2 KFLGIIPARYSSTRLEGKPLKMIEGHTMIEWVYKRAK-KSNLDALIVATDDERIYNEVTN 60
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG IMTS++ NGT R E +K+ +YDI++NIQGDEPLIE E+I+ +++ + D
Sbjct: 61 FGGQAIMTSKNHTNGTSRIAEVCEKM-TEYDIIINIQGDEPLIEYEMINSLIETFKENKD 119
Query: 169 AVFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+T L E+ +PN VK + D + YAIYFSR +IPY + N Y H+GI
Sbjct: 120 LKMATLKHKLLDKEEIENPNNVKVICDKNDYAIYFSRSVIPYPRK---NENISYFKHIGI 176
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
Y +F+ Y + TPL+ E LEQL+VLENGYK+KV++ H GVD E++E++ +
Sbjct: 177 YGYKRDFVIEYSKMLATPLEETESLEQLRVLENGYKIKVLETTHSLIGVDTQENLEQVIN 236
Query: 288 FMRERNL 294
++RE N+
Sbjct: 237 YIRENNI 243
>gi|298377602|ref|ZP_06987554.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Bacteroides sp.
3_1_19]
gi|298265621|gb|EFI07282.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Bacteroides sp.
3_1_19]
Length = 251
Score = 210 bits (534), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 112/252 (44%), Positives = 157/252 (62%), Gaps = 11/252 (4%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR+AS+RF GKPL ++ GKPMIQR +E+ K LD + VATDD +I +
Sbjct: 3 KFIGIIPARYASTRFPGKPLADMNGKPMIQRVYEQVK--DVLDSVCVATDDIRIENAVKT 60
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG V+MTS+ R+GT+RC EA QK+ + YD++VNIQGDEP I PE I +K A +
Sbjct: 61 FGGQVVMTSDQHRSGTDRCYEAYQKIGEGYDVIVNIQGDEPFIHPEQIQ-TIKTCFADAN 119
Query: 169 AVFSTAVTSLKPED-----AFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP--- 220
+T V + +D F+PN K V++N+ A+YFSR +IPY + K P
Sbjct: 120 TQIATLVKPFRSDDDFESTLFNPNSPKVVLNNNNEAMYFSRSIIPYIRGKKYTEWLPSHT 179
Query: 221 YLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPE 280
+ H+G+ +Y + LK L + L+L E LEQL+ LENGYK+KV + E G+D PE
Sbjct: 180 FYKHIGLYAYRAQVLKEITQLPQSALELAESLEQLRWLENGYKIKVGITEQETIGIDTPE 239
Query: 281 DVEKIESFMRER 292
D+EK +F+ R
Sbjct: 240 DMEKALAFLANR 251
>gi|218262802|ref|ZP_03477160.1| hypothetical protein PRABACTJOHN_02840 [Parabacteroides johnsonii
DSM 18315]
gi|218223134|gb|EEC95784.1| hypothetical protein PRABACTJOHN_02840 [Parabacteroides johnsonii
DSM 18315]
Length = 253
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 111/255 (43%), Positives = 161/255 (63%), Gaps = 11/255 (4%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR+AS+RF GKPL ++ GKPMIQR +E ++ LD + VATDD++I Q
Sbjct: 2 KFIGIIPARYASTRFPGKPLADMAGKPMIQRVYE--QVQNVLDAVCVATDDDRIEAAVQA 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG V+MTS+ ++GT+RC EA K+ YD+VVNIQGDEP I+PE I+ ++KA
Sbjct: 60 FGGHVVMTSDQHKSGTDRCYEAYCKIGDGYDVVVNIQGDEPFIQPEQIE-ILKACFIDDS 118
Query: 169 AVFSTAVTSLKPED-----AFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP--- 220
+T V +P+D F+ N K V++ + A+YFSR +IPY + K P
Sbjct: 119 IQIATLVKPFRPDDDFETTLFNANSPKVVLNKNNEAMYFSRSIIPYMRGRKYTEWLPNHT 178
Query: 221 YLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPE 280
Y H+G+ +Y ++ LK L +PL+L E LEQL+ LENGYK+KV E G+D PE
Sbjct: 179 YYKHIGLYAYRADTLKEITHLPQSPLELTESLEQLRWLENGYKIKVGITQQETIGIDTPE 238
Query: 281 DVEKIESFMRERNLS 295
D+EK +F++ +++
Sbjct: 239 DMEKALAFLKNTSIN 253
>gi|423341879|ref|ZP_17319594.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Parabacteroides
johnsonii CL02T12C29]
gi|409219972|gb|EKN12931.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Parabacteroides
johnsonii CL02T12C29]
Length = 253
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 111/255 (43%), Positives = 161/255 (63%), Gaps = 11/255 (4%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR+AS+RF GKPL ++ GKPMIQR +E ++ LD + VATDD++I Q
Sbjct: 2 KFIGIIPARYASTRFPGKPLADMAGKPMIQRVYE--QVQNVLDAVCVATDDDRIEAAVQA 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG V+MTS+ ++GT+RC EA K+ YD+VVNIQGDEP I+PE I+ ++KA
Sbjct: 60 FGGHVVMTSDQHKSGTDRCYEAYCKIGDGYDVVVNIQGDEPFIQPEQIE-ILKACFIDDS 118
Query: 169 AVFSTAVTSLKPED-----AFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP--- 220
+T V +P+D F+ N K V++ + A+YFSR +IPY + K P
Sbjct: 119 IQIATLVKPFRPDDDFETTLFNANSPKVVLNKNNEAMYFSRSIIPYMRGRKYTEWLPNHT 178
Query: 221 YLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPE 280
Y H+G+ +Y ++ LK L +PL+L E LEQL+ LENGYK+KV E G+D PE
Sbjct: 179 YYKHIGLYAYRADTLKEITHLPQSPLELAESLEQLRWLENGYKIKVGITQQETIGIDTPE 238
Query: 281 DVEKIESFMRERNLS 295
D+EK +F++ +++
Sbjct: 239 DMEKALAFLKNTSIN 253
>gi|352684023|ref|YP_004896007.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Acidaminococcus
intestini RyC-MR95]
gi|350278677|gb|AEQ21867.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Acidaminococcus
intestini RyC-MR95]
Length = 254
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 104/232 (44%), Positives = 147/232 (63%), Gaps = 3/232 (1%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+AS+R GKPL N+ GKPMIQR +ER+ A D ++VATDDE+I E + FG
Sbjct: 1 MIPARYASTRLPGKPLANLAGKPMIQRVYERAAQAKIPDEIIVATDDERIKETVEGFGGK 60
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFS 172
+MT+ + +GT+R E + K D+++N+QGDEP+I PE+ID + +A + +
Sbjct: 61 AMMTAATHPSGTDRLAEVALSYD-KVDVIINVQGDEPMIPPELIDSLCEAFENNDQLQMA 119
Query: 173 TAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDS 232
TA T + + DPN VK V D GYAIYFSR LIPY + P+F H+GI +Y
Sbjct: 120 TAKTLMDASEYDDPNAVKVVTDQSGYAIYFSRSLIPYPRHK--TPEFKVYKHIGIYAYRR 177
Query: 233 NFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEK 284
+FL + L PTPL+ E LEQL+ LE G K+KV+ D + G+D ED+++
Sbjct: 178 DFLLKFAALLPTPLEQIEGLEQLRALETGAKIKVLTTDFKGIGIDTQEDLDR 229
>gi|340759432|ref|ZP_08696003.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Fusobacterium
varium ATCC 27725]
gi|251836663|gb|EES65198.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Fusobacterium
varium ATCC 27725]
Length = 246
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 105/247 (42%), Positives = 161/247 (65%), Gaps = 6/247 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +G+IP+R+AS+R +GKPL +I G M++ + R+ L + LD++V+ATDD++I + +
Sbjct: 2 KFLGVIPSRYASTRLDGKPLKDICGHTMVEWVYRRA-LLSKLDNVVIATDDDRIVKEIEA 60
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG +VIMT + NGT R E +K +YD++VNIQGDEPLIEPE+I+ ++ +
Sbjct: 61 FGGNVIMTRKDHINGTSRIAEVCEKY-SEYDVIVNIQGDEPLIEPEMINSIIDSFLKDKS 119
Query: 169 AVFSTAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
V ST L E+ +PN VK + D + +AIYFSR +IPY +S + Y H+GI
Sbjct: 120 IVMSTLKHKLNTMEEVENPNSVKVITDKNDFAIYFSRSVIPYPRSLDLKN---YYKHIGI 176
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
Y F+ Y + TPL+L E LEQL+VLENGYK+KVI+ ++ GVD ++++K+
Sbjct: 177 YGYKREFVMEYSKMESTPLELSESLEQLRVLENGYKIKVIETPYKIIGVDTQDELDKVRE 236
Query: 288 FMRERNL 294
++RE N+
Sbjct: 237 YIREHNI 243
>gi|348025334|ref|YP_004765138.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Megasphaera
elsdenii DSM 20460]
gi|341821387|emb|CCC72311.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Megasphaera
elsdenii DSM 20460]
Length = 249
Score = 207 bits (528), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 106/247 (42%), Positives = 153/247 (61%), Gaps = 9/247 (3%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ V IIP+R+AS+R GKPL +I GKPM+QR +E++ A+ L +VVA D+ K+ +
Sbjct: 2 KFVCIIPSRYASTRLPGKPLCDIAGKPMVQRVYEQAAKASKLTSVVVAVDNPKVYDTVVT 61
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG +MT E NGT+R EA+ D++VN+QGDEPLI P++ID + +A +A PD
Sbjct: 62 FGGHAVMTREDHANGTDRLAEAVGHFPDA-DVIVNVQGDEPLIAPDVIDDLCRAFEAEPD 120
Query: 169 AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK----SGKVNPQFPYLLH 224
+T L+ ++ DP+ VK V++ A+YFSR LIPY + G + P H
Sbjct: 121 LTMATVAAPLQEDEYDDPSAVKVVLNQKDEAMYFSRSLIPYPRHSFEEGGIQP----YKH 176
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEK 284
+GI +Y +FL Y + TP + E LEQL+VLENGYK+KVIK H+ G+D P+D+E
Sbjct: 177 IGIYAYRRDFLLQYAAMEQTPAEKVESLEQLRVLENGYKIKVIKTHHQFIGIDTPDDLEH 236
Query: 285 IESFMRE 291
I + E
Sbjct: 237 IRRYFAE 243
>gi|422339303|ref|ZP_16420262.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Fusobacterium
nucleatum subsp. polymorphum F0401]
gi|355371157|gb|EHG18515.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Fusobacterium
nucleatum subsp. polymorphum F0401]
Length = 245
Score = 207 bits (528), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 108/247 (43%), Positives = 158/247 (63%), Gaps = 6/247 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR++S+R EGKPL I G MI+ ++R+K + LD L+VATDDE+I
Sbjct: 2 KFLGIIPARYSSTRLEGKPLKMIEGHTMIEWVYKRAK-KSNLDALIVATDDERIYNEVIN 60
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG IMTS++ NGT R E +K+ +YDI++NIQGDEPLIE E+I+ +++ + D
Sbjct: 61 FGGQAIMTSKNHTNGTSRIAEVCEKM-TEYDIIINIQGDEPLIEYEMINSLIETFKENKD 119
Query: 169 AVFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+T L ++ +PN VK + D + YAIYFSR +IPY + N Y H+GI
Sbjct: 120 LKMATLKHKLLDKKEIENPNNVKVICDKNDYAIYFSRSVIPYPRK---NENISYFKHIGI 176
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
Y +F+ Y + TPL+ E LEQL+VLENGYK+KV++ H GVD E++E++ +
Sbjct: 177 YGYKRDFVIEYSKMLATPLEETESLEQLRVLENGYKIKVLETTHSLIGVDTQENLEQVIN 236
Query: 288 FMRERNL 294
++RE N+
Sbjct: 237 YIRENNI 243
>gi|310778871|ref|YP_003967204.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Ilyobacter
polytropus DSM 2926]
gi|309748194|gb|ADO82856.1| 3-deoxy-D-manno-octulosonatecytidylyltransferase [Ilyobacter
polytropus DSM 2926]
Length = 245
Score = 207 bits (528), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 105/247 (42%), Positives = 161/247 (65%), Gaps = 6/247 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +G+IPAR+AS+R EGKPL++I G+PMI+ ++R+ LA++LD +VVATDD++I +
Sbjct: 2 KFLGVIPARYASTRLEGKPLISIEGQPMIEWVYKRT-LASSLDKVVVATDDKRIFDAVIS 60
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG + +MTS NGT R E + E YD+++N+QGDEPLIE +ID +++ + D
Sbjct: 61 FGGEAVMTSPDHTNGTSRIAEVAAEYED-YDVIINVQGDEPLIEGAMIDALIEPFRENHD 119
Query: 169 AVFSTAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
V +T + E+ +PN VK + DN +AIYFSR IPY ++ + Y H+GI
Sbjct: 120 LVMATLKHKIDNYEEVENPNNVKVITDNKDFAIYFSRSPIPYPRTLDMKN---YYKHVGI 176
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
Y +F+ Y + PT L++ E LEQL+V+ENGYK+KV+ ++ GVD ED+ K+E
Sbjct: 177 YGYKRDFVIEYSKMIPTDLEISESLEQLRVIENGYKIKVLDTPYKVIGVDTSEDLAKVEK 236
Query: 288 FMRERNL 294
+R+ N+
Sbjct: 237 IIRDNNI 243
>gi|270285239|ref|ZP_06194633.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
muridarum Nigg]
gi|270289258|ref|ZP_06195560.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
muridarum Weiss]
gi|301336635|ref|ZP_07224837.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
muridarum MopnTet14]
gi|14194887|sp|Q9PKL1.2|KDSB_CHLMU RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
Length = 254
Score = 207 bits (527), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 113/245 (46%), Positives = 157/245 (64%), Gaps = 8/245 (3%)
Query: 48 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQ 107
S+ VGI+PAR+ SSRF GKPL ILGK +IQR++E + + +LD +VVATDD++I +
Sbjct: 7 SKRVGILPARWGSSRFPGKPLAKILGKTLIQRSYENALTSRSLDCVVVATDDQRIFDHVV 66
Query: 108 QFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
+FG +MT ESC NGTER EA+ + + +IVVNIQGDEP + P IIDG+V+ L+ P
Sbjct: 67 EFGGLCVMTCESCANGTERVEEAVSQHFPQAEIVVNIQGDEPCLSPSIIDGLVEMLEGNP 126
Query: 168 DAVFSTAVT-SLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLG 226
+T VT ++ P+ ++VKCV D G A+YFSR +IP N P LH+G
Sbjct: 127 AIDIATPVTETVDPDAILTNHKVKCVFDKTGRALYFSRSVIPNNFKRST----PIYLHIG 182
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHG--VDAPEDVEK 284
+ ++ FL Y + P+ L L EDLEQL+VLE+G + V V A G VD PED+ K
Sbjct: 183 VYAFRRAFLSEYVKIPPSSLSLAEDLEQLRVLESGRSIYV-HVVQNATGPSVDYPEDISK 241
Query: 285 IESFM 289
+E ++
Sbjct: 242 VEQYL 246
>gi|150007177|ref|YP_001301920.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Parabacteroides
distasonis ATCC 8503]
gi|229830639|sp|A6L9D4.1|KDSB_PARD8 RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|149935601|gb|ABR42298.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Parabacteroides
distasonis ATCC 8503]
Length = 251
Score = 207 bits (527), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 111/252 (44%), Positives = 156/252 (61%), Gaps = 11/252 (4%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR+AS+RF GKPL ++ GKPMIQR +E+ K LD + VATDD +I +
Sbjct: 3 KFIGIIPARYASTRFPGKPLADMNGKPMIQRVYEQVK--DVLDSVCVATDDIRIENAVKA 60
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG V+MTS+ R+GT+RC EA QK+ + YD++VNIQGDEP I PE I +K A +
Sbjct: 61 FGGQVVMTSDQHRSGTDRCYEAYQKIGEGYDVIVNIQGDEPFIHPEQIQ-TIKTCFADAN 119
Query: 169 AVFSTAVTSLKPED-----AFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP--- 220
+T V + +D F+PN K V++ + A+YFSR +IPY + K P
Sbjct: 120 TQIATLVKPFRSDDDFESSLFNPNSPKVVLNKNNEAMYFSRSIIPYIRGKKYTEWLPSHT 179
Query: 221 YLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPE 280
+ H+G+ +Y + LK L + L+L E LEQL+ LENGYK+KV + E G+D PE
Sbjct: 180 FYKHIGLYAYRAQVLKEITQLPQSALELAESLEQLRWLENGYKIKVGITEQETIGIDTPE 239
Query: 281 DVEKIESFMRER 292
D+EK +F+ R
Sbjct: 240 DMEKALAFLANR 251
>gi|423331147|ref|ZP_17308931.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Parabacteroides
distasonis CL03T12C09]
gi|409230443|gb|EKN23305.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Parabacteroides
distasonis CL03T12C09]
Length = 250
Score = 207 bits (527), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 111/252 (44%), Positives = 156/252 (61%), Gaps = 11/252 (4%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR+AS+RF GKPL ++ GKPMIQR +E+ K LD + VATDD +I +
Sbjct: 2 KFIGIIPARYASTRFPGKPLADMNGKPMIQRVYEQVK--DVLDSVCVATDDIRIENAVKA 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG V+MTS+ R+GT+RC EA QK+ + YD++VNIQGDEP I PE I +K A +
Sbjct: 60 FGGQVVMTSDQHRSGTDRCYEAYQKIGEGYDVIVNIQGDEPFIHPEQIQ-TIKTCFADAN 118
Query: 169 AVFSTAVTSLKPED-----AFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP--- 220
+T V + +D F+PN K V++ + A+YFSR +IPY + K P
Sbjct: 119 TQIATLVKPFRSDDDFESSLFNPNSPKVVLNKNNEAMYFSRSIIPYIRGKKYTEWLPSHT 178
Query: 221 YLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPE 280
+ H+G+ +Y + LK L + L+L E LEQL+ LENGYK+KV + E G+D PE
Sbjct: 179 FYKHIGLYAYRAQVLKEITQLPQSALELAESLEQLRWLENGYKIKVGITEQETIGIDTPE 238
Query: 281 DVEKIESFMRER 292
D+EK +F+ R
Sbjct: 239 DMEKALAFLANR 250
>gi|255015208|ref|ZP_05287334.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bacteroides sp.
2_1_7]
gi|256840552|ref|ZP_05546060.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Parabacteroides
sp. D13]
gi|301311157|ref|ZP_07217085.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Bacteroides sp.
20_3]
gi|256737824|gb|EEU51150.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Parabacteroides
sp. D13]
gi|300830731|gb|EFK61373.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Bacteroides sp.
20_3]
Length = 251
Score = 207 bits (527), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 111/252 (44%), Positives = 156/252 (61%), Gaps = 11/252 (4%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR+AS+RF GKPL ++ GKPMIQR +E+ K LD + VATDD +I +
Sbjct: 3 KFIGIIPARYASTRFPGKPLADMNGKPMIQRVYEQVK--DVLDSVCVATDDIRIENAVKA 60
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG V+MTS+ R+GT+RC EA QK+ + YD++VNIQGDEP I PE I +K A +
Sbjct: 61 FGGQVVMTSDQHRSGTDRCYEAYQKIGEGYDVIVNIQGDEPFIHPEQIQ-TIKTCFADAN 119
Query: 169 AVFSTAVTSLKPED-----AFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP--- 220
+T V + +D F+PN K V++ + A+YFSR +IPY + K P
Sbjct: 120 TQIATLVKPFRSDDDFESTLFNPNSPKVVLNKNNEAMYFSRSIIPYIRGKKYTEWLPSHT 179
Query: 221 YLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPE 280
+ H+G+ +Y + LK L + L+L E LEQL+ LENGYK+KV + E G+D PE
Sbjct: 180 FYKHIGLYAYRAQVLKEITQLPQSALELAESLEQLRWLENGYKIKVGITEQETIGIDTPE 239
Query: 281 DVEKIESFMRER 292
D+EK +F+ R
Sbjct: 240 DMEKALAFLANR 251
>gi|410104412|ref|ZP_11299325.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Parabacteroides
sp. D25]
gi|423338379|ref|ZP_17316122.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Parabacteroides
distasonis CL09T03C24]
gi|409234221|gb|EKN27051.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Parabacteroides
sp. D25]
gi|409234430|gb|EKN27259.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Parabacteroides
distasonis CL09T03C24]
Length = 250
Score = 207 bits (527), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 111/252 (44%), Positives = 156/252 (61%), Gaps = 11/252 (4%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR+AS+RF GKPL ++ GKPMIQR +E+ K LD + VATDD +I +
Sbjct: 2 KFIGIIPARYASTRFPGKPLADMNGKPMIQRVYEQVK--DVLDSVCVATDDIRIENAVKA 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG V+MTS+ R+GT+RC EA QK+ + YD++VNIQGDEP I PE I +K A +
Sbjct: 60 FGGQVVMTSDQHRSGTDRCYEAYQKIGEGYDVIVNIQGDEPFIHPEQIQ-TIKTCFADAN 118
Query: 169 AVFSTAVTSLKPED-----AFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP--- 220
+T V + +D F+PN K V++ + A+YFSR +IPY + K P
Sbjct: 119 TQIATLVKPFRSDDDFESTLFNPNSPKVVLNKNNEAMYFSRSIIPYIRGKKYTEWLPSHT 178
Query: 221 YLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPE 280
+ H+G+ +Y + LK L + L+L E LEQL+ LENGYK+KV + E G+D PE
Sbjct: 179 FYKHIGLYAYRAQVLKEITQLPQSALELAESLEQLRWLENGYKIKVGITEQETIGIDTPE 238
Query: 281 DVEKIESFMRER 292
D+EK +F+ R
Sbjct: 239 DMEKALAFLANR 250
>gi|374587139|ref|ZP_09660231.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Leptonema illini
DSM 21528]
gi|373876000|gb|EHQ07994.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Leptonema illini
DSM 21528]
Length = 247
Score = 207 bits (527), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 113/248 (45%), Positives = 154/248 (62%), Gaps = 5/248 (2%)
Query: 48 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQ 107
+V+G+IPAR+ S+RF GK L I PMI+ +E +K A LDHLV+ATDDE++ E +
Sbjct: 2 GKVLGVIPARYGSTRFPGKVLAKIGTYPMIRYVYEAAKQAKGLDHLVIATDDERVREAVE 61
Query: 108 QFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
FG + +MTSE ++GT+R E + + K YDI+VNIQGDEP IEPE+IDGV + P
Sbjct: 62 AFGGECLMTSEEHKSGTDRLAE-VAEYYKDYDILVNIQGDEPGIEPELIDGVARMKIENP 120
Query: 168 DAVFSTAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLG 226
D +TA KP ED PNRVK V+ G A+YFSR LIP+ ++ KV+ P LHLG
Sbjct: 121 DWEMTTAARPFKPGEDPLQPNRVKVVMTRSGRALYFSRSLIPFPRN-KVD--RPVYLHLG 177
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIE 286
I +Y +FL + L + L+ E LEQL+ LEN + + V + GVD PED+ I
Sbjct: 178 IYAYQRDFLMRFHTLPASGLEDAESLEQLRALENDHSIGVFITEASLPGVDTPEDLAAIT 237
Query: 287 SFMRERNL 294
+ + L
Sbjct: 238 GIFKSKGL 245
>gi|15835072|ref|NP_296831.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
muridarum Nigg]
gi|7190499|gb|AAF39307.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
muridarum Nigg]
Length = 275
Score = 207 bits (527), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 117/260 (45%), Positives = 161/260 (61%), Gaps = 11/260 (4%)
Query: 36 ARAYLGRSKNF---RSRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDH 92
R YL F S+ VGI+PAR+ SSRF GKPL ILGK +IQR++E + + +LD
Sbjct: 13 GRVYLRGCDVFAFLTSKRVGILPARWGSSRFPGKPLAKILGKTLIQRSYENALTSRSLDC 72
Query: 93 LVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIE 152
+VVATDD++I + +FG +MT ESC NGTER EA+ + + +IVVNIQGDEP +
Sbjct: 73 VVVATDDQRIFDHVVEFGGLCVMTCESCANGTERVEEAVSQHFPQAEIVVNIQGDEPCLS 132
Query: 153 PEIIDGVVKALQAAPDAVFSTAVT-SLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK 211
P IIDG+V+ L+ P +T VT ++ P+ ++VKCV D G A+YFSR +IP N
Sbjct: 133 PSIIDGLVEMLEGNPAIDIATPVTETVDPDAILTNHKVKCVFDKTGRALYFSRSVIPNNF 192
Query: 212 SGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDH 271
P LH+G+ ++ FL Y + P+ L L EDLEQL+VLE+G + V V
Sbjct: 193 KRST----PIYLHIGVYAFRRAFLSEYVKIPPSSLSLAEDLEQLRVLESGRSIYV-HVVQ 247
Query: 272 EAHG--VDAPEDVEKIESFM 289
A G VD PED+ K+E ++
Sbjct: 248 NATGPSVDYPEDISKVEQYL 267
>gi|262381173|ref|ZP_06074311.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Bacteroides sp.
2_1_33B]
gi|262296350|gb|EEY84280.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Bacteroides sp.
2_1_33B]
Length = 251
Score = 207 bits (526), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 110/252 (43%), Positives = 156/252 (61%), Gaps = 11/252 (4%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR+AS+RF GKPL ++ GKPMIQR +E+ K LD + +ATDD +I +
Sbjct: 3 KFIGIIPARYASTRFPGKPLADMNGKPMIQRVYEQVK--DVLDSVCIATDDIRIENAVKA 60
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG V+MTS+ R+GT+RC EA QK+ + YD++VNIQGDEP I PE I +K A +
Sbjct: 61 FGGQVVMTSDQHRSGTDRCYEAYQKIGEGYDVIVNIQGDEPFIHPEQIQ-TIKTCFADAN 119
Query: 169 AVFSTAVTSLKPED-----AFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP--- 220
+T V + +D F+PN K V++ + A+YFSR +IPY + K P
Sbjct: 120 TQIATLVKPFRSDDDFESTLFNPNSPKVVLNKNNEAMYFSRSIIPYIRGKKYTEWLPSHT 179
Query: 221 YLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPE 280
+ H+G+ +Y + LK L + L+L E LEQL+ LENGYK+KV + E G+D PE
Sbjct: 180 FYKHIGLYAYRAQVLKEITQLPQSALELAESLEQLRWLENGYKIKVGITEQETIGIDTPE 239
Query: 281 DVEKIESFMRER 292
D+EK +F+ R
Sbjct: 240 DMEKALAFLANR 251
>gi|19704142|ref|NP_603704.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Fusobacterium
nucleatum subsp. nucleatum ATCC 25586]
gi|22095792|sp|Q8RFA8.1|KDSB_FUSNN RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|19714354|gb|AAL95003.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Fusobacterium
nucleatum subsp. nucleatum ATCC 25586]
Length = 245
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 108/247 (43%), Positives = 157/247 (63%), Gaps = 6/247 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR++S+R EGKPL I G MI+ ++R+K + LD L+VATDDE+I
Sbjct: 2 KFLGIIPARYSSTRLEGKPLKMIEGHTMIEWVYKRAK-KSNLDSLIVATDDERIYNEVIN 60
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG IMTS++ NGT R E +K+ +YD ++NIQGDEPLIE E+I+ +++ + D
Sbjct: 61 FGGQAIMTSKNHTNGTSRIAEVCEKM-TEYDTIINIQGDEPLIEYEMINSLIETFKENKD 119
Query: 169 AVFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+T L E+ +PN VK V D + YAIYFSR +IPY + N Y H+GI
Sbjct: 120 LKMATLKHKLLNKEEIKNPNNVKVVCDKNDYAIYFSRSVIPYPRK---NGNISYFKHIGI 176
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
Y +F+ Y + TPL+ E LEQL+VLENGYK+KV++ H GVD E++E++ +
Sbjct: 177 YGYKRDFVIEYSKMLATPLEEIESLEQLRVLENGYKIKVLETTHSLIGVDTQENLEQVIN 236
Query: 288 FMRERNL 294
+++E N+
Sbjct: 237 YIKENNI 243
>gi|402299181|ref|ZP_10818811.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Bacillus
alcalophilus ATCC 27647]
gi|401725647|gb|EJS98920.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Bacillus
alcalophilus ATCC 27647]
Length = 243
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 112/242 (46%), Positives = 158/242 (65%), Gaps = 7/242 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+VVG+IPAR+ S+RF GKPL I GKPMIQR +E+ + L +VVATD ++I + +
Sbjct: 2 KVVGVIPARYGSTRFPGKPLALINGKPMIQRVYEQVCKSKELAMVVVATDHDQIKKAVED 61
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG IMT + G++R E +K+ D VNIQGDEPLI+ E+ID +++ +A+P+
Sbjct: 62 FGGTAIMTRADHQTGSDRIAEVAKKIAA--DFYVNIQGDEPLIQAELIDALMQTAKASPE 119
Query: 169 AVFSTAVTSLKPE-DAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
AV TA T +K E D +PN VK V + A+YFSR +PYN+SG VN Y HLG+
Sbjct: 120 AVV-TAKTVIKEETDILNPNVVKVVTGENAQALYFSRSAVPYNRSG-VNQ--IYYKHLGL 175
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
Y N LK + L + L+ E LEQL+++ENGY +KVI+ ++EA GVD PED++K+E
Sbjct: 176 YGYPRNVLKRFVQLPASELEKAEVLEQLRLIENGYVIKVIETEYEAIGVDTPEDIKKVEQ 235
Query: 288 FM 289
+
Sbjct: 236 LL 237
>gi|313205476|ref|YP_004044133.1| 3-deoxy-d-mannO-octulosonatecytidylyltransferase [Paludibacter
propionicigenes WB4]
gi|312444792|gb|ADQ81148.1| 3-deoxy-D-manno-octulosonatecytidylyltransferase [Paludibacter
propionicigenes WB4]
Length = 260
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 109/250 (43%), Positives = 160/250 (64%), Gaps = 10/250 (4%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
R VGIIPARFAS+RF GKPLV+I GK MIQR +E +++ L+++ VATDD +I E
Sbjct: 13 RFVGIIPARFASTRFPGKPLVDIGGKTMIQRVYE--QVSKALENVYVATDDNRIFEAVIS 70
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG IMTS+ ++GT+RC EA KL++ +D+VVNIQGDEP I+PE I + A +
Sbjct: 71 FGGKAIMTSDKHKSGTDRCFEAFTKLDEWFDVVVNIQGDEPFIQPEQIIELQNCF-ADTN 129
Query: 169 AVFSTAVTSLKPEDAFD----PNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF---PY 221
+T + +D+ + PN K V++ A+YFSR +IPY + ++ PY
Sbjct: 130 TQIATLAKKVTAKDSIEFITNPNNPKLVINKLNEAMYFSRSVIPYRRGAELEDWISLHPY 189
Query: 222 LLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPED 281
L H+GI +Y ++ L+ L +PL++ E LEQL+ LENGY++KV D E G+D PED
Sbjct: 190 LKHVGIYAYRADVLRELTLLEQSPLEIAESLEQLRWLENGYRIKVGFTDVETVGIDTPED 249
Query: 282 VEKIESFMRE 291
+EK++ +++
Sbjct: 250 LEKVKDLLKD 259
>gi|290968949|ref|ZP_06560484.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Megasphaera
genomosp. type_1 str. 28L]
gi|335049091|ref|ZP_08542102.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Megasphaera sp.
UPII 199-6]
gi|290780905|gb|EFD93498.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Megasphaera
genomosp. type_1 str. 28L]
gi|333764536|gb|EGL41930.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Megasphaera sp.
UPII 199-6]
Length = 245
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 105/239 (43%), Positives = 148/239 (61%), Gaps = 2/239 (0%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
+ IIPAR+AS+R GKPL +I GKPMIQR +E+ + AT + + VVATD K+ + QFG
Sbjct: 4 ICIIPARYASTRLPGKPLADIAGKPMIQRVYEQVRQATLIQNAVVATDSPKVYDTVIQFG 63
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAV 170
+MT E GT+R EA + + +V+N+QGDEPLI PEIID + +A D
Sbjct: 64 GQAVMTREDHATGTDRIAEAAEHFPQA-QVVINVQGDEPLIAPEIIDELCRAFFTYEDLQ 122
Query: 171 FSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSY 230
+T L P++ DP VK V++ A+YFSR LIPY + + PY H+GI +Y
Sbjct: 123 MATVAAPLAPDEYEDPAAVKVVLNCRNEAMYFSRSLIPYPRHAFAAGRGPY-KHIGIYAY 181
Query: 231 DSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFM 289
+FL Y L TP + E LEQL+VLENGY +KVI+ D G+D PED+++++++
Sbjct: 182 KKDFLLQYATLPQTPAEQAESLEQLRVLENGYTIKVIRTDKRFIGIDTPEDLQRVQAYF 240
>gi|373113911|ref|ZP_09528130.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Fusobacterium
necrophorum subsp. funduliforme 1_1_36S]
gi|371653365|gb|EHO18763.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Fusobacterium
necrophorum subsp. funduliforme 1_1_36S]
Length = 247
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 107/247 (43%), Positives = 157/247 (63%), Gaps = 5/247 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +G+IPAR+AS+R EGKPL +I G MI+ + R + T LD ++VATDD++I + +
Sbjct: 2 KFLGVIPARYASTRLEGKPLKDICGHSMIEWVYRRCQ-NTKLDDIIVATDDDRIFKEVEA 60
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG +MTS NGT R E QK+ YD++VNIQGDEPLIE ++ID +++A Q
Sbjct: 61 FGGKAMMTSSKHPNGTSRIAEVCQKM-TDYDVIVNIQGDEPLIEAQMIDMIIEAFQKESL 119
Query: 169 AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQ 228
+ + ED +PN+VK V D YA+YFSR ++PY + K N Y H+GI
Sbjct: 120 CMCTLKHKLQTWEDIENPNQVKVVTDKKDYALYFSRSVLPYPR--KENSAL-YYKHIGIY 176
Query: 229 SYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESF 288
Y F+ Y + PT L+ E LEQL+VLENGYK+KV++ +++ GVD ED+EK+ +
Sbjct: 177 GYTREFVLEYAAMAPTALETSESLEQLRVLENGYKIKVLETPYQSVGVDTQEDLEKVRQW 236
Query: 289 MRERNLS 295
++ER ++
Sbjct: 237 IQERGIT 243
>gi|296328653|ref|ZP_06871170.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Fusobacterium
nucleatum subsp. nucleatum ATCC 23726]
gi|296154252|gb|EFG95053.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Fusobacterium
nucleatum subsp. nucleatum ATCC 23726]
Length = 245
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 108/247 (43%), Positives = 157/247 (63%), Gaps = 6/247 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR++S+R EGKPL I G MI+ ++R+K + LD L+VATDDE+I
Sbjct: 2 KFLGIIPARYSSTRLEGKPLKMIEGHTMIEWVYKRAK-KSNLDSLIVATDDERIYNEVIN 60
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG IMTS++ NGT R E +K+ +YD ++NIQGDEPLIE E+I+ +++ + D
Sbjct: 61 FGGQAIMTSKNHTNGTSRIAEVCEKM-TEYDTIINIQGDEPLIEYEMINSLIETFKENKD 119
Query: 169 AVFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+T L E+ +PN VK V D + YAIYFSR +IPY + N Y H+GI
Sbjct: 120 LKMATLKHKLLDKEEIKNPNNVKIVCDKNDYAIYFSRSVIPYPRK---NGNISYFKHIGI 176
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
Y +F+ Y + TPL+ E LEQL+VLENGYK+KV++ H GVD E++E++ +
Sbjct: 177 YGYKRDFVIEYSKMLATPLEEIESLEQLRVLENGYKIKVLETTHSLIGVDTQENLEQVIN 236
Query: 288 FMRERNL 294
+++E N+
Sbjct: 237 YIKENNI 243
>gi|34762436|ref|ZP_00143436.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Fusobacterium
nucleatum subsp. vincentii ATCC 49256]
gi|237741774|ref|ZP_04572255.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Fusobacterium sp.
4_1_13]
gi|256845102|ref|ZP_05550560.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Fusobacterium
sp. 3_1_36A2]
gi|294785610|ref|ZP_06750898.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Fusobacterium
sp. 3_1_27]
gi|27887904|gb|EAA24972.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Fusobacterium
nucleatum subsp. vincentii ATCC 49256]
gi|229429422|gb|EEO39634.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Fusobacterium sp.
4_1_13]
gi|256718661|gb|EEU32216.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Fusobacterium
sp. 3_1_36A2]
gi|294487324|gb|EFG34686.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Fusobacterium
sp. 3_1_27]
Length = 245
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 108/247 (43%), Positives = 156/247 (63%), Gaps = 6/247 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR++S+R EGKPL I G MI+ ++R+K + LD L+VATDDE+I
Sbjct: 2 KFLGIIPARYSSTRLEGKPLKMIEGHTMIEWVYKRAK-KSNLDALIVATDDERIYNEVIN 60
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG IMTS++ NGT R E +K+ +YD V+NIQGDEPLIE E+I+ ++ + +
Sbjct: 61 FGGQAIMTSKNHANGTSRIAEVCEKM-TEYDTVINIQGDEPLIEYEMINSLIDTFKENSN 119
Query: 169 AVFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+T L E+ +PN VK V D + YAIYFSR +IPY + N Y H+GI
Sbjct: 120 LKMATLKHKLIDKEEIENPNNVKVVCDKNDYAIYFSRSVIPYPRK---NENISYFKHIGI 176
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
Y +F+ Y + TPL+ E LEQL+VLENGYK+KV++ H GVD E++E++ +
Sbjct: 177 YGYKRDFVIDYSKMSATPLEETESLEQLRVLENGYKIKVLETTHSLIGVDTQENLEQVIN 236
Query: 288 FMRERNL 294
+++E N+
Sbjct: 237 YIKENNI 243
>gi|419840937|ref|ZP_14364321.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Fusobacterium
necrophorum subsp. funduliforme ATCC 51357]
gi|386906536|gb|EIJ71263.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Fusobacterium
necrophorum subsp. funduliforme ATCC 51357]
Length = 247
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 106/247 (42%), Positives = 157/247 (63%), Gaps = 5/247 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +G+IPAR+AS+R EGKPL +I G MI+ + R + T LD ++VATDD++I + +
Sbjct: 2 KFLGVIPARYASTRLEGKPLKDICGHSMIEWVYRRCQ-NTKLDDIIVATDDDRIFKEVEA 60
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG +MTS NGT R E QK+ YD++VNIQGDEPLIE ++ID +++A Q
Sbjct: 61 FGGKAMMTSSKHPNGTSRIAEVCQKM-TDYDVIVNIQGDEPLIEAQMIDMIIEAFQKESL 119
Query: 169 AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQ 228
+ + ED +PN+VK V D YA+YFSR ++PY + K N Y H+GI
Sbjct: 120 CMCTLKHKLQTWEDIENPNQVKVVTDKKDYALYFSRSVLPYPR--KENSAL-YYKHIGIY 176
Query: 229 SYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESF 288
Y F+ Y + PT L+ E LEQL+VLENGYK+KV++ +++ GVD ED+E++ +
Sbjct: 177 GYTREFVLEYAAMAPTALETSESLEQLRVLENGYKIKVLETPYQSVGVDTQEDLERVRQW 236
Query: 289 MRERNLS 295
++ER ++
Sbjct: 237 IQERGIT 243
>gi|166154392|ref|YP_001654510.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis 434/Bu]
gi|166155267|ref|YP_001653522.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis L2b/UCH-1/proctitis]
gi|301335651|ref|ZP_07223895.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis L2tet1]
gi|339625837|ref|YP_004717316.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis L2c]
gi|238687438|sp|B0B9T2.1|KDSB_CHLT2 RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|238687460|sp|B0BBG2.1|KDSB_CHLTB RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|557478|gb|AAA80194.1| CMP-2-keto-3-deoxyoctulosonic acid synthetase [Chlamydia
trachomatis]
gi|165930380|emb|CAP03873.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis 434/Bu]
gi|165931255|emb|CAP06827.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis L2b/UCH-1/proctitis]
gi|339460476|gb|AEJ76979.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis L2c]
gi|440525983|emb|CCP51467.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis L2b/8200/07]
gi|440535808|emb|CCP61321.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis L2b/795]
gi|440536699|emb|CCP62213.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis L1/440/LN]
gi|440537590|emb|CCP63104.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis L1/1322/p2]
gi|440538479|emb|CCP63993.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis L1/115]
gi|440539368|emb|CCP64882.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis L1/224]
gi|440540259|emb|CCP65773.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis L2/25667R]
gi|440541148|emb|CCP66662.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis L3/404/LN]
gi|440542036|emb|CCP67550.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis L2b/UCH-2]
gi|440542927|emb|CCP68441.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis L2b/Canada2]
gi|440543818|emb|CCP69332.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis L2b/LST]
gi|440544708|emb|CCP70222.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis L2b/Ams1]
gi|440545598|emb|CCP71112.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis L2b/CV204]
gi|440913860|emb|CCP90277.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis L2b/Ams2]
gi|440914750|emb|CCP91167.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis L2b/Ams3]
gi|440915641|emb|CCP92058.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis L2b/Canada1]
gi|440916536|emb|CCP92953.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis L2b/Ams4]
gi|440917426|emb|CCP93843.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis L2b/Ams5]
Length = 254
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 111/245 (45%), Positives = 154/245 (62%), Gaps = 8/245 (3%)
Query: 48 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQ 107
S+ VGI+P+R+ SSRF GKPL ILGK ++QR++E + + +LD +VVATDD++I +
Sbjct: 7 SKKVGILPSRWGSSRFPGKPLAKILGKTLVQRSYENALSSQSLDCVVVATDDQRIFDHVV 66
Query: 108 QFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
+FG +MTS SC NGTER E + + + +IVVNIQGDEP + P +IDG+V L+ P
Sbjct: 67 EFGGLCVMTSTSCANGTERVEEVVSRHFPQAEIVVNIQGDEPCLSPTVIDGLVSTLENNP 126
Query: 168 DAVFSTAVT-SLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLG 226
A T VT + PE ++VKCV D +G A+YFSR IP+N P LH+G
Sbjct: 127 AADMVTPVTETTDPEAILTDHKVKCVFDKNGKALYFSRSAIPHNFKHPT----PIYLHIG 182
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHG--VDAPEDVEK 284
+ ++ FL Y + P+ L L EDLEQL+VLE G + V V A G VD PED+ K
Sbjct: 183 VYAFRKAFLSEYVKIPPSSLSLAEDLEQLRVLETGRSIYV-HVVQNATGPSVDYPEDITK 241
Query: 285 IESFM 289
+E ++
Sbjct: 242 VEQYL 246
>gi|15604902|ref|NP_219686.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis D/UW-3/CX]
gi|76788904|ref|YP_327990.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis A/HAR-13]
gi|237804528|ref|YP_002888682.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis B/TZ1A828/OT]
gi|255310982|ref|ZP_05353552.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis 6276]
gi|255317283|ref|ZP_05358529.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis 6276s]
gi|255506757|ref|ZP_05382396.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis D(s)2923]
gi|376282186|ref|YP_005156012.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis A2497]
gi|385239692|ref|YP_005807534.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis G/9768]
gi|385240613|ref|YP_005808454.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis G/11222]
gi|385242468|ref|YP_005810307.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis G/9301]
gi|385246078|ref|YP_005814900.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis G/11074]
gi|389857871|ref|YP_006360113.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis F/SW4]
gi|389859623|ref|YP_006361863.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis F/SW5]
gi|123607086|sp|Q3KMI0.1|KDSB_CHLTA RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|288561902|sp|P0CD75.1|KDSB_CHLTR RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|3328587|gb|AAC67774.1| CMP-2-keto-3-deoxyoctulosonic acid synthetase [Chlamydia
trachomatis D/UW-3/CX]
gi|76167434|gb|AAX50442.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis A/HAR-13]
gi|231272828|emb|CAX09737.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis B/TZ1A828/OT]
gi|296435697|gb|ADH17871.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis G/9768]
gi|296436621|gb|ADH18791.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis G/11222]
gi|296437557|gb|ADH19718.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis G/11074]
gi|297140056|gb|ADH96814.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis G/9301]
gi|371908216|emb|CAX08843.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis A2497]
gi|380248943|emb|CCE14234.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis F/SW5]
gi|380249818|emb|CCE13345.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis F/SW4]
gi|438690105|emb|CCP49362.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis A/7249]
gi|438691189|emb|CCP48463.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis A/5291]
gi|438692562|emb|CCP47564.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis A/363]
gi|440525095|emb|CCP50346.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis K/SotonK1]
gi|440526878|emb|CCP52362.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis D/SotonD1]
gi|440527771|emb|CCP53255.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis D/SotonD5]
gi|440528662|emb|CCP54146.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis D/SotonD6]
gi|440531343|emb|CCP56853.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis F/SotonF3]
gi|440532235|emb|CCP57745.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis G/SotonG1]
gi|440533129|emb|CCP58639.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis Ia/SotonIa1]
gi|440534023|emb|CCP59533.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis Ia/SotonIa3]
Length = 254
Score = 204 bits (520), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 111/245 (45%), Positives = 155/245 (63%), Gaps = 8/245 (3%)
Query: 48 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQ 107
S+ VGI+P+R+ SSRF GKPL ILGK ++QR++E + + +LD +VVATDD++I +
Sbjct: 7 SKKVGILPSRWGSSRFPGKPLAKILGKTLVQRSYENALSSQSLDCVVVATDDQRIFDHVV 66
Query: 108 QFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
+FG +MTS SC NGTER E + + + +IVVNIQGDEP + P +IDG+V L+ P
Sbjct: 67 EFGGLCVMTSTSCANGTERVEEVVSRHFPQAEIVVNIQGDEPCLSPTVIDGLVSTLENNP 126
Query: 168 DAVFSTAVT-SLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLG 226
A T+VT + PE ++VKCV D +G A+YFSR IP+N P LH+G
Sbjct: 127 AADMVTSVTETTDPEAILTDHKVKCVFDKNGKALYFSRSAIPHNFKHPT----PIYLHIG 182
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHG--VDAPEDVEK 284
+ ++ FL Y + P+ L L EDLEQL+VLE G + V V A G VD PED+ K
Sbjct: 183 VYAFRKAFLSEYVKIPPSSLSLAEDLEQLRVLEIGRSIYV-HVVQNATGPSVDYPEDITK 241
Query: 285 IESFM 289
+E ++
Sbjct: 242 VEQYL 246
>gi|385243389|ref|YP_005811235.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis D-EC]
gi|385244269|ref|YP_005812113.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis D-LC]
gi|385269848|ref|YP_005813008.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis A2497]
gi|297748312|gb|ADI50858.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis D-EC]
gi|297749192|gb|ADI51870.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis D-LC]
gi|347974988|gb|AEP35009.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis A2497]
Length = 266
Score = 204 bits (520), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 111/245 (45%), Positives = 155/245 (63%), Gaps = 8/245 (3%)
Query: 48 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQ 107
S+ VGI+P+R+ SSRF GKPL ILGK ++QR++E + + +LD +VVATDD++I +
Sbjct: 19 SKKVGILPSRWGSSRFPGKPLAKILGKTLVQRSYENALSSQSLDCVVVATDDQRIFDHVV 78
Query: 108 QFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
+FG +MTS SC NGTER E + + + +IVVNIQGDEP + P +IDG+V L+ P
Sbjct: 79 EFGGLCVMTSTSCANGTERVEEVVSRHFPQAEIVVNIQGDEPCLSPTVIDGLVSTLENNP 138
Query: 168 DAVFSTAVT-SLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLG 226
A T+VT + PE ++VKCV D +G A+YFSR IP+N P LH+G
Sbjct: 139 AADMVTSVTETTDPEAILTDHKVKCVFDKNGKALYFSRSAIPHNFKHPT----PIYLHIG 194
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHG--VDAPEDVEK 284
+ ++ FL Y + P+ L L EDLEQL+VLE G + V V A G VD PED+ K
Sbjct: 195 VYAFRKAFLSEYVKIPPSSLSLAEDLEQLRVLEIGRSIYV-HVVQNATGPSVDYPEDITK 253
Query: 285 IESFM 289
+E ++
Sbjct: 254 VEQYL 258
>gi|237802606|ref|YP_002887800.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis B/Jali20/OT]
gi|231273840|emb|CAX10630.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis B/Jali20/OT]
Length = 254
Score = 204 bits (518), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 110/245 (44%), Positives = 155/245 (63%), Gaps = 8/245 (3%)
Query: 48 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQ 107
S+ VGI+P+R+ SSRF GKPL ILGK ++QR++E + + +LD +VVATDD++I +
Sbjct: 7 SKKVGILPSRWGSSRFPGKPLAKILGKTLVQRSYENALSSQSLDCVVVATDDQRIFDHVV 66
Query: 108 QFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
+FG +MTS SC NGTER E + + + +IVVNIQGDEP + P +IDG+V L+ P
Sbjct: 67 EFGGLCVMTSTSCANGTERVEEVVSRHFPQAEIVVNIQGDEPCLSPTVIDGLVSTLENNP 126
Query: 168 DAVFSTAVT-SLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLG 226
A T+VT + PE ++VKCV D +G A+YFSR IP+N P LH+G
Sbjct: 127 AADMVTSVTETTDPEAILTDHKVKCVFDKNGKALYFSRSAIPHNFKHPT----PIYLHIG 182
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHG--VDAPEDVEK 284
+ ++ FL Y + P+ L L EDLEQL+VLE G + V V A G +D PED+ K
Sbjct: 183 VYAFRKAFLSEYVKIPPSSLSLAEDLEQLRVLEIGRSIYV-HVVQNATGPSIDYPEDITK 241
Query: 285 IESFM 289
+E ++
Sbjct: 242 VEQYL 246
>gi|373497805|ref|ZP_09588323.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Fusobacterium sp.
12_1B]
gi|404366289|ref|ZP_10971674.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Fusobacterium
ulcerans ATCC 49185]
gi|313689140|gb|EFS25975.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Fusobacterium
ulcerans ATCC 49185]
gi|371962588|gb|EHO80180.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Fusobacterium sp.
12_1B]
Length = 246
Score = 204 bits (518), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 103/249 (41%), Positives = 165/249 (66%), Gaps = 10/249 (4%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +G+IP+R+AS+R EGKPL +I G M++ + R+ L + LD++V+ATDDEKI + +
Sbjct: 2 KFLGVIPSRYASTRLEGKPLKDICGHTMVEWVYRRA-LLSKLDNVVIATDDEKIVKEVKS 60
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKAL---QA 165
FG +VIMT + NGT R E + + YD++VNIQGDEPLIEP++I+ ++ + ++
Sbjct: 61 FGGNVIMTRKDHINGTSRIAEVCETYSE-YDVIVNIQGDEPLIEPDMINSIIDSFLEDKS 119
Query: 166 APDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHL 225
P + ++++ E+ +PN VK V D + +AIYFSR +IPY ++ + Y H+
Sbjct: 120 IPMSTLKHKLSTM--EEIENPNSVKVVTDKNDFAIYFSRSVIPYPRNLDLKN---YYKHI 174
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKI 285
GI Y +F+ Y ++ TPL+L E LEQL+VLENGYK+KVI+ ++ GVD E+++K+
Sbjct: 175 GIYGYKRDFVMEYSKMNSTPLELSESLEQLRVLENGYKIKVIETPYKIIGVDTQEELDKV 234
Query: 286 ESFMRERNL 294
++ E N+
Sbjct: 235 RKYITEHNI 243
>gi|148265019|ref|YP_001231725.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Geobacter
uraniireducens Rf4]
gi|189028422|sp|A5G5T4.1|KDSB_GEOUR RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|146398519|gb|ABQ27152.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Geobacter
uraniireducens Rf4]
Length = 251
Score = 204 bits (518), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 108/247 (43%), Positives = 150/247 (60%), Gaps = 13/247 (5%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
++ IIPAR+AS+RFEGK L +I+GKPM+Q +ER+ A+ + ++VATDDE+IA
Sbjct: 2 KITAIIPARYASTRFEGKALADIMGKPMVQHVYERTAKASLVSEVIVATDDERIAAAVHA 61
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG MTS GT+R E +L+ DI+VN+QGDEPLIEP +ID +K L
Sbjct: 62 FGGRAEMTSRVHETGTDRLAEVAARLDS--DIIVNVQGDEPLIEPAMIDEAIKPLAEDSS 119
Query: 169 AVFSTAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNP---------Q 218
+ T T +K D PN VK V D GYA+YFSR +P N K N +
Sbjct: 120 VMMGTLKTRIKTLHDFLSPNVVKVVTDWEGYALYFSRSPLP-NFRDKWNDLKDEAFASRK 178
Query: 219 FPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDA 278
H+G+ Y +FL + + PT L++ E LEQL+VLENGY++KV++ D+E+ GVD
Sbjct: 179 LLCYKHVGLYVYRRDFLLQFAQMSPTYLEMAEKLEQLRVLENGYRIKVVETDYESIGVDT 238
Query: 279 PEDVEKI 285
P D+EK+
Sbjct: 239 PGDLEKV 245
>gi|421525456|ref|ZP_15972066.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Fusobacterium
nucleatum ChDC F128]
gi|402258025|gb|EJU08497.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Fusobacterium
nucleatum ChDC F128]
Length = 245
Score = 204 bits (518), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 107/247 (43%), Positives = 157/247 (63%), Gaps = 6/247 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR++S+R EGKPL I G MI+ ++R+K + LD L+VATDDE+I
Sbjct: 2 KFLGIIPARYSSTRLEGKPLKIIEGHTMIEWVYKRAK-KSNLDALIVATDDERIYNEVIN 60
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG IMTS+ NGT R E +K+ +YD ++NIQGDEPLIE E+I+ +++ + +
Sbjct: 61 FGGQAIMTSKDHTNGTSRIAEVCEKM-TEYDTIINIQGDEPLIEYEMINSLIETFKENKN 119
Query: 169 AVFSTAVTSLK-PEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+T L E+ +PN VK V D + YAIYFSR +IPY + N Y H+GI
Sbjct: 120 LKMATLKHKLSDKEEIENPNNVKVVCDKNDYAIYFSRSVIPYPRK---NEAISYFKHIGI 176
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
+Y +F+ Y + TPL+ E LEQL+VLENGYK+KV++ H GVD E++E++ +
Sbjct: 177 YAYKRDFVIEYSKMIATPLEETESLEQLRVLENGYKIKVLETTHSLIGVDTQENLEQVIN 236
Query: 288 FMRERNL 294
+++E N+
Sbjct: 237 YIKENNI 243
>gi|89898215|ref|YP_515325.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydophila
felis Fe/C-56]
gi|123483483|sp|Q254V8.1|KDSB_CHLFF RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|89331587|dbj|BAE81180.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydophila
felis Fe/C-56]
Length = 254
Score = 204 bits (518), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 103/245 (42%), Positives = 155/245 (63%), Gaps = 5/245 (2%)
Query: 46 FRSRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAEC 105
F S+ VG++PAR+ S RF GKPL NILGK +IQRT+E +TTLD +VVATD+++I +
Sbjct: 6 FASKKVGVLPARWGSVRFTGKPLANILGKSLIQRTYENISQSTTLDKVVVATDNQRIMDH 65
Query: 106 CQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQA 165
FG D +MTS C NGTER EA+ + + +I+VNIQGDEP ++ ++D +V+ L+
Sbjct: 66 VLDFGGDCVMTSPECANGTERTAEAISRYFPEAEIIVNIQGDEPCLQHTVVDTLVRKLEE 125
Query: 166 APD-AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLH 224
+P+ V + A + + +VKCV D +G A+YFSR IP+ + + P LH
Sbjct: 126 SPEIQVVTPAAKTTDSHEILTNQKVKCVFDKNGKALYFSRSPIPH----ILKKETPIYLH 181
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEK 284
+G+ ++ N L Y PT L EDLEQL++LE+G + + V+ ++ VD PED+ K
Sbjct: 182 IGVYAFRRNALFSYIESTPTSLSQAEDLEQLRILEHGGSIHICVVEAKSPSVDYPEDINK 241
Query: 285 IESFM 289
+E ++
Sbjct: 242 VEKYL 246
>gi|255348539|ref|ZP_05380546.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis 70]
gi|255503079|ref|ZP_05381469.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis 70s]
gi|385241545|ref|YP_005809385.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis E/11023]
gi|385245152|ref|YP_005813975.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis E/150]
gi|386262532|ref|YP_005815811.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis Sweden2]
gi|389858747|ref|YP_006360988.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis E/SW3]
gi|289525220|emb|CBJ14696.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis Sweden2]
gi|296434768|gb|ADH16946.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis E/150]
gi|296438488|gb|ADH20641.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis E/11023]
gi|380250696|emb|CCE12456.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis E/SW3]
gi|440529552|emb|CCP55036.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis E/SotonE4]
gi|440530451|emb|CCP55935.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis E/SotonE8]
gi|440534918|emb|CCP60428.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis E/Bour]
Length = 254
Score = 203 bits (517), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 111/245 (45%), Positives = 154/245 (62%), Gaps = 8/245 (3%)
Query: 48 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQ 107
S+ VGI+P+R+ SSRF GKPL ILGK ++QR++E + + +LD +VVATDD++I +
Sbjct: 7 SKKVGILPSRWGSSRFPGKPLAKILGKTLVQRSYENALSSQSLDCVVVATDDQRIFDHVV 66
Query: 108 QFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
+FG +MTS SC NGTER E + + + +IVVNIQGDEP + P +IDG+V L+ P
Sbjct: 67 EFGGLCVMTSTSCANGTERVEEVVSRHFPQAEIVVNIQGDEPCLSPTVIDGLVSTLENNP 126
Query: 168 DAVFSTAVT-SLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLG 226
A T VT + PE ++VKCV D +G A+YFSR IP+N P LH+G
Sbjct: 127 AADMVTPVTETTDPEAILTDHKVKCVFDKNGKALYFSRSAIPHNFKHPT----PIYLHIG 182
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHG--VDAPEDVEK 284
+ ++ FL Y + P+ L L EDLEQL+VLE G + V V A G VD PED+ K
Sbjct: 183 VYAFRKAFLSEYVKIPPSSLSLAEDLEQLRVLEIGRSIYV-HVVQNATGPSVDYPEDITK 241
Query: 285 IESFM 289
+E ++
Sbjct: 242 VEQYL 246
>gi|340754194|ref|ZP_08690957.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Fusobacterium sp.
2_1_31]
gi|422316151|ref|ZP_16397552.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Fusobacterium
periodonticum D10]
gi|229423722|gb|EEO38769.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Fusobacterium sp.
2_1_31]
gi|404591453|gb|EKA93597.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Fusobacterium
periodonticum D10]
Length = 245
Score = 203 bits (517), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 106/247 (42%), Positives = 156/247 (63%), Gaps = 6/247 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR++S+R EGKPL I G MI+ ++R+K + LD L+VATDDE+I
Sbjct: 2 KFLGIIPARYSSTRLEGKPLKLIEGHTMIEWVYKRAK-KSNLDSLIVATDDERIYNEVLN 60
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG IMTS NGT R E +K+ K YD+++NIQGDEPLIE E+I+ +++ + D
Sbjct: 61 FGGQAIMTSTEHTNGTSRIAEVCEKI-KDYDVIINIQGDEPLIEYEMINSLIETFKENKD 119
Query: 169 AVFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+T L + E+ +PN VK + D + YAIYFSR +IPY + Y H+GI
Sbjct: 120 LKMATLKHKLTEKEEIENPNNVKVICDKNDYAIYFSRSVIPYPRKA---DNISYFKHIGI 176
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
Y +F+ Y + T L++ E LEQL+VLENGYK+KV++ H GVD E++E++ +
Sbjct: 177 YGYKRDFVIDYSKMPATALEVAESLEQLRVLENGYKIKVLETTHSLIGVDTQENLEQVIN 236
Query: 288 FMRERNL 294
F+++ N+
Sbjct: 237 FVKKNNI 243
>gi|371778046|ref|ZP_09484368.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Anaerophaga sp.
HS1]
Length = 252
Score = 203 bits (517), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 107/245 (43%), Positives = 157/245 (64%), Gaps = 11/245 (4%)
Query: 50 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQF 109
++GIIPAR+AS+RF GKPL +I GKPMIQR +E++ + L +VVATDDE+I E F
Sbjct: 6 ILGIIPARYASTRFPGKPLADIGGKPMIQRVYEQA--SKVLPQVVVATDDERIMEAVSNF 63
Query: 110 GADVIMTSESCRNGTERCNEALQKLE----KKYDIVVNIQGDEPLIEPEIIDGVVKALQA 165
G +MT++S R+GT+RC EAL K E + Y +VVNIQGDEP I P+ I+ +
Sbjct: 64 GGQGVMTAKSHRSGTDRCQEALNKTEILHNRSYKVVVNIQGDEPFINPKQIEKLTSCFHN 123
Query: 166 APDAVFSTAVTSLKPE-DAFDPNRVKCVVDNHGYAIYFSRGLIPYNK---SGKVNPQFPY 221
A D +T V LK + FDPN+ K V+D + A+YFSR IPY + S K + Y
Sbjct: 124 A-DTEIATLVKPLKNHTELFDPNKPKVVIDKNNNALYFSRSPIPYLRNIQSEKWHLHHNY 182
Query: 222 LLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPED 281
+H+G+ +Y ++ L+ L P+PL++ E LEQL+ +ENGY + + + E+ +D P D
Sbjct: 183 YIHIGLYAYRTDVLREITCLKPSPLEIAESLEQLRWIENGYIITTRQTEFESWSIDTPND 242
Query: 282 VEKIE 286
+E+++
Sbjct: 243 IERLK 247
>gi|410100125|ref|ZP_11295089.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Parabacteroides
goldsteinii CL02T12C30]
gi|409216252|gb|EKN09238.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Parabacteroides
goldsteinii CL02T12C30]
Length = 252
Score = 203 bits (516), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 109/253 (43%), Positives = 157/253 (62%), Gaps = 11/253 (4%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR+AS+RF GKPL ++ G+PMIQR +E+ K LD + VATDD +I +
Sbjct: 2 KFIGIIPARYASTRFPGKPLADMAGRPMIQRVYEQVK--DVLDAVCVATDDSRIEAAVKA 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG +V+MTS+ R+GT+R EA K+ + YD+VVNIQGDEP I PE I+ +KA
Sbjct: 60 FGGNVVMTSDQHRSGTDRVYEAYTKVGQGYDVVVNIQGDEPFIHPEQIE-TLKACFTDVG 118
Query: 169 AVFSTAVTSLKPED-----AFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP--- 220
+T V +P+D F+ N K V++ + A+YFSR +IPY + P
Sbjct: 119 TQIATLVKPFRPDDDFETTLFNANSPKVVLNKNNEAMYFSRSIIPYMRGKNYQEWLPNHT 178
Query: 221 YLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPE 280
Y H+G+ +Y ++ LK L +PL+L E LEQL+ LENGYK+KV E G+D PE
Sbjct: 179 YYKHIGLYAYRADTLKEITHLPQSPLELAESLEQLRWLENGYKIKVGITQQETIGIDTPE 238
Query: 281 DVEKIESFMRERN 293
D+EK +F+ +++
Sbjct: 239 DMEKALAFLSQQH 251
>gi|340755623|ref|ZP_08692297.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Fusobacterium sp.
D12]
gi|421500846|ref|ZP_15947834.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Fusobacterium
necrophorum subsp. funduliforme Fnf 1007]
gi|313686276|gb|EFS23111.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Fusobacterium sp.
D12]
gi|402267009|gb|EJU16414.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Fusobacterium
necrophorum subsp. funduliforme Fnf 1007]
Length = 247
Score = 203 bits (516), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 106/247 (42%), Positives = 157/247 (63%), Gaps = 5/247 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +G+IPAR+AS+R EGKPL +I G MI+ + R + T LD ++VATDD++I + +
Sbjct: 2 KFLGVIPARYASTRLEGKPLKDICGHSMIEWVYRRCQ-NTKLDDIIVATDDDRIFKEVEA 60
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG +MTS NGT R E QK+ YD++VNIQGDEPLIE ++ID +++A Q
Sbjct: 61 FGGKAMMTSSKHPNGTSRIAEVCQKM-TDYDVIVNIQGDEPLIEAQMIDMIIEAFQKESL 119
Query: 169 AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQ 228
+ + ED +PN+VK V D YA+YFSR ++PY + K N Y H+GI
Sbjct: 120 CMCTLKHKLQTWEDIENPNQVKVVTDKKDYALYFSRSVLPYPR--KENSAL-YYKHIGIY 176
Query: 229 SYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESF 288
Y F+ Y + PT L+ E LEQL+VLENGYK+KV++ +++ GVD ED+E++ +
Sbjct: 177 GYTREFVLEYAAMAPTALETSESLEQLRVLENGYKIKVLETPYQSVGVDTQEDLERVCQW 236
Query: 289 MRERNLS 295
++ER ++
Sbjct: 237 IQERGIT 243
>gi|424513118|emb|CCO66702.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bathycoccus
prasinos]
Length = 326
Score = 203 bits (516), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 114/250 (45%), Positives = 157/250 (62%), Gaps = 6/250 (2%)
Query: 42 RSKNFRSRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEK 101
++K + RV+GIIPAR+ S+RF GKPL +I GKPMI T+ + + LD +VATDD +
Sbjct: 50 QNKKKQPRVLGIIPARYGSTRFPGKPLADIAGKPMIWHTYTNACKSRALDLCIVATDDAR 109
Query: 102 IAECCQQFGADVIMTSESCRNGTERCNEALQKLEKK---YDIVVNIQGDEPLIEPEIIDG 158
I + + FG ++T+ C NGTERC E +K KK YD++VNIQGDEP IEPE ID
Sbjct: 110 IKKVVESFGGICVLTNPECVNGTERCLEVYKKCIKKGEEYDVIVNIQGDEPFIEPEHIDL 169
Query: 159 VVKAL-QAAPDAVFSTAVT--SLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKV 215
V + + +A D V + ++ +D N VK VVD + A+YFSR +IP+NKSG
Sbjct: 170 VAQIVCEAEEDDVCMGTLCRPAIDRKDVEGVNNVKVVVDRNMNALYFSRAIIPHNKSGTY 229
Query: 216 NPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHG 275
+P YL LGI SY ++FL Y + + LQ+ EDLEQ KV+E GYK+K+ V+ HG
Sbjct: 230 DPDTKYLRKLGIYSYRADFLPEYVRMPESMLQISEDLEQNKVIEAGYKIKLGWVEDAVHG 289
Query: 276 VDAPEDVEKI 285
VD +E +
Sbjct: 290 VDTVGQLEAL 299
>gi|421056948|ref|ZP_15519865.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pelosinus
fermentans B4]
gi|421069231|ref|ZP_15530403.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pelosinus
fermentans A11]
gi|392438128|gb|EIW15990.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pelosinus
fermentans B4]
gi|392450251|gb|EIW27304.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pelosinus
fermentans A11]
Length = 240
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 101/241 (41%), Positives = 150/241 (62%), Gaps = 4/241 (1%)
Query: 50 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQF 109
+V +IPAR++S+R GKPL +I GKPMIQ +ER+ LA ++VATD + E ++F
Sbjct: 3 IVCVIPARYSSTRLPGKPLADIAGKPMIQHVYERAALAKRPQRVIVATDHPLVLEAVKKF 62
Query: 110 GADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
G +V++TS GT+R E ++ D+++N+QGDEP+IEPE+ID + A PD
Sbjct: 63 GGEVLLTSADHPTGTDRLAEVAEQC-PDVDLIINVQGDEPMIEPEVIDQLASAFDNQPDL 121
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQS 229
+T +T + + P VK + D GYA+YFSR LIP+ +V P H+GI +
Sbjct: 122 NMATLMTQMDTSEYQVPGAVKVITDLQGYALYFSRSLIPF---PRVEVGLPVFKHIGIYA 178
Query: 230 YDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFM 289
Y FL Y L PTPL+ E LEQL+ LE+GY++KVI+ + ++ GVD ED+EK+ +
Sbjct: 179 YRREFLLKYAKLSPTPLEKTESLEQLRALEHGYRIKVIETNFKSIGVDTLEDLEKVNLLL 238
Query: 290 R 290
+
Sbjct: 239 K 239
>gi|320353190|ref|YP_004194529.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Desulfobulbus
propionicus DSM 2032]
gi|320121692|gb|ADW17238.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Desulfobulbus
propionicus DSM 2032]
Length = 253
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 105/245 (42%), Positives = 148/245 (60%), Gaps = 2/245 (0%)
Query: 48 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQ 107
S+++ IIPAR+ S+RFEGKPL I GKPMIQ ER++ T L +VVATDDE+IA +
Sbjct: 6 SKIIAIIPARYQSNRFEGKPLALIAGKPMIQHVVERAQRVTLLSRVVVATDDERIARAVE 65
Query: 108 QFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAA 166
FG +MT GT+R EA + L+ D++VNIQGD+PL PEI++ V + L
Sbjct: 66 AFGGSWVMTRRDHATGTDRLAEAARLLDIADQDVIVNIQGDQPLFSPEIVEQVARPLIDD 125
Query: 167 PDAVFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHL 225
P +T + + +PE+ DPN VK V D HG A+YFSR IP+ + Q Y HL
Sbjct: 126 PSLPMATLIYKIVRPEEITDPNHVKTVFDCHGNALYFSRSPIPFQRDPGDREQPTYYKHL 185
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKI 285
G +Y FL + GL + E LEQL+ LE GY ++V+ DH++ VD P+D+ ++
Sbjct: 186 GFYAYRKGFLVTFVGLPEGQWERFEKLEQLRALEFGYSIRVVLTDHDSVEVDTPKDLLRV 245
Query: 286 ESFMR 290
E ++
Sbjct: 246 EELLQ 250
>gi|392963391|ref|ZP_10328817.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pelosinus
fermentans DSM 17108]
gi|392451215|gb|EIW28209.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pelosinus
fermentans DSM 17108]
Length = 240
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 101/241 (41%), Positives = 150/241 (62%), Gaps = 4/241 (1%)
Query: 50 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQF 109
+V +IPAR++S+R GKPL +I GKPMIQ +ER+ LA ++VATD + E ++F
Sbjct: 3 IVCVIPARYSSTRLPGKPLADIAGKPMIQHVYERAALAKRPQRVIVATDHPLVLEAVKKF 62
Query: 110 GADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
G +V++TS GT+R E ++ D+++N+QGDEP+IEPE+ID + A PD
Sbjct: 63 GGEVLLTSADHPTGTDRLAEVAEQC-PDVDLIINVQGDEPMIEPEVIDQLASAFDNQPDL 121
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQS 229
+T +T + + P VK + D GYA+YFSR LIP+ +V P H+GI +
Sbjct: 122 NMATLMTQMDTSEYQVPGAVKVITDLQGYALYFSRSLIPF---PRVEVGLPVFKHIGIYA 178
Query: 230 YDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFM 289
Y FL Y L PTPL+ E LEQL+ LE+GY++KVI+ + ++ GVD ED+EK+ +
Sbjct: 179 YRREFLLKYAKLAPTPLEKTESLEQLRALEHGYRIKVIETNFKSIGVDTLEDLEKVNLLL 238
Query: 290 R 290
+
Sbjct: 239 K 239
>gi|262065867|ref|ZP_06025479.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Fusobacterium
periodonticum ATCC 33693]
gi|291380454|gb|EFE87972.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Fusobacterium
periodonticum ATCC 33693]
Length = 245
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 106/247 (42%), Positives = 154/247 (62%), Gaps = 6/247 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR++S+R EGKPL I G MI+ ++R+K + LD L+VATDDE+I
Sbjct: 2 KFLGIIPARYSSTRLEGKPLKLIEGHTMIEWVYKRAK-KSNLDSLIVATDDERIYNEVLN 60
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG IMTS NGT R E +K+ K YD+++NIQGDEPLIE E+I+ +++ + D
Sbjct: 61 FGGQAIMTSTEHTNGTSRIAEVCEKI-KDYDVIINIQGDEPLIEYEMINTLIETFKENKD 119
Query: 169 AVFSTAVTSLK-PEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+T L E+ +PN VK + D + YAIYFSR +IPY + Y H+GI
Sbjct: 120 LKMATLKHKLTDKEEIENPNNVKVICDKNDYAIYFSRSVIPYPRKA---DNISYFKHIGI 176
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
Y +F+ Y + T L++ E LEQL+VLENGYK+KV++ H GVD E++E++
Sbjct: 177 YGYKRDFVIDYSKMPATELEIAESLEQLRVLENGYKIKVLETTHSLIGVDTQENLEQVID 236
Query: 288 FMRERNL 294
+++E N+
Sbjct: 237 YIKENNI 243
>gi|327403712|ref|YP_004344550.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Fluviicola
taffensis DSM 16823]
gi|327319220|gb|AEA43712.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Fluviicola
taffensis DSM 16823]
Length = 244
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 102/243 (41%), Positives = 152/243 (62%), Gaps = 2/243 (0%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
R++GIIPAR+ SSRF GKPL+++ GK MIQR E + ++ L L+VATDD++I E +
Sbjct: 2 RILGIIPARYGSSRFPGKPLIDLKGKTMIQRVVEGAAKSSLLTDLIVATDDQRIVEAVES 61
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG V MT GT+RC E ++ L YD+V+NIQGDEPL++ +D +++A
Sbjct: 62 FGGKVQMTDSKHPTGTDRCAEIVRSLADNYDVVINIQGDEPLVDARQLDQLLQAFTNPEV 121
Query: 169 AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ--FPYLLHLG 226
+ + A ++ ED +PNR+K +VD + A+YFSR IP + K P +P+L H+G
Sbjct: 122 QIATLASRKIEMEDILNPNRIKVIVDKNQNALYFSRSPIPNFANAKGEPLEIYPFLRHIG 181
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIE 286
+ +Y S L L T L+ E LEQL+ L NGYK++V++ + E +D PEDVEK+
Sbjct: 182 LYAYRSEVLLQLSELEETHLEKIESLEQLRWLYNGYKIQVVETEIETPNIDTPEDVEKVL 241
Query: 287 SFM 289
+ +
Sbjct: 242 NLL 244
>gi|237744925|ref|ZP_04575406.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Fusobacterium sp.
7_1]
gi|229432154|gb|EEO42366.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Fusobacterium sp.
7_1]
Length = 245
Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 106/247 (42%), Positives = 154/247 (62%), Gaps = 6/247 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR++S+R EGKPL I G MI+ ++R+ + LD L+VATDDE+I
Sbjct: 2 KFLGIIPARYSSTRLEGKPLKMIEGHTMIEWVYKRAN-KSNLDALIVATDDERIYNEVIN 60
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG IMT+++ NGT R E +K+ +D ++NIQGDEPLIE E+I+ +++ + D
Sbjct: 61 FGGQAIMTNKNHTNGTSRIAEVCEKM-TDFDTIINIQGDEPLIEYEMINSLIETFKENKD 119
Query: 169 AVFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+T L E+ +PN VK V D + YAIYFSR +IPY + N Y H+GI
Sbjct: 120 LKMATLKHKLLDKEEIENPNNVKVVCDKNDYAIYFSRSVIPYPRK---NENIAYFKHIGI 176
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
Y +F+ Y + TPL+ E LEQL+VLENGYK+KV++ H GVD E++E++
Sbjct: 177 YGYKRDFVIEYSKMSATPLEETESLEQLRVLENGYKIKVLETTHSLIGVDTQENLEQVIK 236
Query: 288 FMRERNL 294
F+R+ N+
Sbjct: 237 FIRKNNI 243
>gi|358465768|ref|ZP_09175665.1| hypothetical protein HMPREF9093_00124 [Fusobacterium sp. oral taxon
370 str. F0437]
gi|357069719|gb|EHI79600.1| hypothetical protein HMPREF9093_00124 [Fusobacterium sp. oral taxon
370 str. F0437]
Length = 245
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 106/245 (43%), Positives = 153/245 (62%), Gaps = 6/245 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
+GIIPAR++S+R EGKPL I G MI+ ++R+K + LD L+VATDDE+I FG
Sbjct: 4 LGIIPARYSSTRLEGKPLKLIEGHTMIEWVYKRAK-KSNLDSLIVATDDERIYNEVLNFG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAV 170
IMTS NGT R E +K+ K YD+++NIQGDEPLIE E+I+ +++ + D
Sbjct: 63 GQAIMTSTEHTNGTSRIAEVCEKI-KDYDVIINIQGDEPLIEYEMINSLIETFKENKDLK 121
Query: 171 FSTAVTSLK-PEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQS 229
+T L E+ +PN VK + D + YAIYFSR +IPY + Y H+GI
Sbjct: 122 MATLKHKLTDKEEIENPNNVKVICDKNDYAIYFSRSVIPYPRKAN---NISYFKHIGIYG 178
Query: 230 YDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFM 289
Y +F+ Y + T L++ E LEQL+VLENGYK+KV++ H GVD E++E++ F+
Sbjct: 179 YKRDFVIDYSKMPATALEVAESLEQLRVLENGYKIKVLETTHSLIGVDTQENLEQVIDFV 238
Query: 290 RERNL 294
++ N+
Sbjct: 239 KKNNI 243
>gi|294783879|ref|ZP_06749201.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Fusobacterium
sp. 1_1_41FAA]
gi|294479691|gb|EFG27470.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Fusobacterium
sp. 1_1_41FAA]
Length = 245
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 105/247 (42%), Positives = 156/247 (63%), Gaps = 6/247 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR++S+R EGKPL I G MI+ ++R+K + LD L+VATDDE+I
Sbjct: 2 KFLGIIPARYSSTRLEGKPLKLIEGHTMIEWVYKRAK-KSNLDSLIVATDDERIYNEVLN 60
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG IMTS NGT R E +K+ K YD+++NIQGDEPLIE E+I+ +++ + D
Sbjct: 61 FGGQAIMTSTEHTNGTSRIAEVCEKI-KDYDVIINIQGDEPLIEYEMINSLIETFKENKD 119
Query: 169 AVFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+T L + E+ +PN VK + D + YAIYFSR +IPY + Y H+GI
Sbjct: 120 LKMATLKHKLIEKEEIENPNNVKVICDKNDYAIYFSRSVIPYPRKA---DDISYFKHIGI 176
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
Y +F+ Y + T L++ E LEQL+VLENGYK+KV++ H GVD E+++++ +
Sbjct: 177 YGYKRDFVIEYSKMPATALEIAESLEQLRVLENGYKIKVLETTHSLIGVDTQENLDQVIN 236
Query: 288 FMRERNL 294
F+++ N+
Sbjct: 237 FVKKNNI 243
>gi|336417899|ref|ZP_08598182.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Fusobacterium
sp. 11_3_2]
gi|336163164|gb|EGN66098.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Fusobacterium
sp. 11_3_2]
Length = 245
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 106/247 (42%), Positives = 155/247 (62%), Gaps = 6/247 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR++S+R EGKPL I G MI+ ++R+K + LD L+VATDDE+I
Sbjct: 2 KFLGIIPARYSSTRLEGKPLKMIEGHTMIEWVYKRAK-KSNLDALIVATDDERIYNEVIN 60
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG IMT+++ NGT R E +K+ +D ++NIQGDEPLIE +I+ +++ + D
Sbjct: 61 FGGQAIMTNKNHTNGTSRIAEVCEKM-TGFDTIINIQGDEPLIEYGMINSLIETFKENKD 119
Query: 169 AVFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+T L E+ +PN VK V D + YAIYFSR +IPY + N Y H+GI
Sbjct: 120 LKMATLKHKLLDKEEIKNPNNVKVVCDKNDYAIYFSRSVIPYPRK---NENIAYFKHIGI 176
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
Y +F+ Y + TPL+ E LEQL+VLENGYK+KV++ H GVD E++E++ +
Sbjct: 177 YGYKRDFVIEYSKMSATPLEETESLEQLRVLENGYKIKVLETTHSLIGVDTQENLEQVIT 236
Query: 288 FMRERNL 294
F+R+ N+
Sbjct: 237 FIRKNNI 243
>gi|421144981|ref|ZP_15604881.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Fusobacterium
nucleatum subsp. fusiforme ATCC 51190]
gi|395488622|gb|EJG09477.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Fusobacterium
nucleatum subsp. fusiforme ATCC 51190]
Length = 245
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 107/247 (43%), Positives = 155/247 (62%), Gaps = 6/247 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR++S+R EGKPL I MI+ ++R+K + LD L+VATDDE+I
Sbjct: 2 KFLGIIPARYSSTRLEGKPLKMIEEHTMIEWVYKRAK-KSNLDALIVATDDERIYNEVIN 60
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG IMTS++ NGT R E +K+ +YD V+NIQGDEPLIE E+I+ ++ + +
Sbjct: 61 FGGQAIMTSKNHANGTSRIAEVCEKM-TEYDTVINIQGDEPLIEYEMINSLIDTFKENSN 119
Query: 169 AVFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+T L E+ +PN VK V D + YAIYFSR +IPY + N Y H+GI
Sbjct: 120 LKMATLKHKLIDKEEIENPNNVKVVCDKNDYAIYFSRSVIPYPRK---NENISYFKHIGI 176
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
Y +F+ Y + TPL+ E LEQL+VLENGYK+KV++ H GVD E++E++ +
Sbjct: 177 YGYKRDFVIDYSKMSATPLEETESLEQLRVLENGYKIKVLETTHSLIGVDTQENLEQVIN 236
Query: 288 FMRERNL 294
+++E N+
Sbjct: 237 YIKENNI 243
>gi|253701221|ref|YP_003022410.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Geobacter sp. M21]
gi|259494413|sp|C6E0M8.1|KDSB_GEOSM RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|251776071|gb|ACT18652.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Geobacter sp.
M21]
Length = 252
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 104/253 (41%), Positives = 156/253 (61%), Gaps = 11/253 (4%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
++ +IPAR+AS+RFEGK L +I+G+PM+Q +ER+ AT + ++VATDDE+IA +
Sbjct: 2 KITAVIPARYASTRFEGKALADIMGRPMVQHVYERAAKATLVSEVIVATDDERIAAAVRA 61
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG V MTS + GT+R E K++ DIVVN+QGDEPLI+P +ID ++ L P
Sbjct: 62 FGGRVEMTSPTHETGTDRLAEVAAKIDA--DIVVNVQGDEPLIDPAMIDEAIRPLLDDPS 119
Query: 169 AVFSTAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK--------SGKVNPQF 219
+T +K D PN VK V D G +YFSR +P+ + V+ +
Sbjct: 120 IPMATLKCRIKTLHDFLSPNVVKVVSDPTGNVLYFSRSPLPFFRDKWNDLKDDAFVSGKL 179
Query: 220 PYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAP 279
H+G+ Y FL ++ GL PT L+L E LEQL+VLENGY++K+++ + E+ GVD P
Sbjct: 180 LCYKHVGLYVYRREFLPVFAGLKPTYLELAEKLEQLRVLENGYRIKIVETEFESIGVDTP 239
Query: 280 EDVEKIESFMRER 292
D++K+ +++R
Sbjct: 240 ADLDKVLERLKDR 252
>gi|121535896|ref|ZP_01667693.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Thermosinus
carboxydivorans Nor1]
gi|121305515|gb|EAX46460.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Thermosinus
carboxydivorans Nor1]
Length = 245
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 102/243 (41%), Positives = 152/243 (62%), Gaps = 3/243 (1%)
Query: 50 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQF 109
++ +IP R+AS+R GK L I GKPMIQ +ER+ A ++VATD E I + + F
Sbjct: 3 ILCVIPTRYASTRLPGKALAEIAGKPMIQHVYERACRAKRPRAVLVATDHELIYQAVKAF 62
Query: 110 GADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
G V++TS GT+R E + + D++VN+QGDEPLI PE+ID + A APD
Sbjct: 63 GGQVMLTSPDHPTGTDRLAE-VARAYPDVDVIVNVQGDEPLIAPEVIDELAAAFDGAPDL 121
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQS 229
+T +T + E+ P+ VK V D +GYA+YFSR LIP+ + + + H+GI +
Sbjct: 122 AMATLMTEMDEEEYNLPSAVKVVTDLNGYALYFSRSLIPFPRVK--HEAYNVYKHIGIYA 179
Query: 230 YDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFM 289
Y +FL + L PTPL+ E LEQL+ LE+GY++KV+K D ++ GVD PED+E++ + +
Sbjct: 180 YRRDFLLTFAALPPTPLERAESLEQLRALEHGYRIKVLKTDFKSIGVDTPEDLERVRAIV 239
Query: 290 RER 292
+R
Sbjct: 240 EQR 242
>gi|422950840|ref|ZP_16968396.1| 3-deoxy-manno-octulosonate cytidylyltransferase, partial
[Fusobacterium nucleatum subsp. animalis ATCC 51191]
gi|339885734|gb|EGQ75432.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Fusobacterium
nucleatum subsp. animalis ATCC 51191]
Length = 243
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 106/245 (43%), Positives = 154/245 (62%), Gaps = 6/245 (2%)
Query: 47 RSRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECC 106
+ + +GIIPAR++S+R EGKPL I G MI+ ++R+K + LD L+VATDDE+I
Sbjct: 4 KMKFLGIIPARYSSTRLEGKPLKMIEGHTMIEWVYKRAK-KSNLDALIVATDDERIYNEV 62
Query: 107 QQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAA 166
FG IMT+++ NGT R E +K+ +D ++NIQGDEPLIE E+I+ +++ +
Sbjct: 63 INFGGQAIMTNKNHTNGTSRIAEVCEKM-TDFDTIINIQGDEPLIEYEMINSLIETFKEN 121
Query: 167 PDAVFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHL 225
D +T L E+ +PN VK V D + YAIYFSR +IPY + N Y H+
Sbjct: 122 KDLKMATLKHKLLDKEEIENPNNVKVVCDKNDYAIYFSRSVIPYPRK---NENIAYFKHI 178
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKI 285
GI Y +F+ Y + TPL+ E LEQL+VLENGYK+KV++ H GVD E++E++
Sbjct: 179 GIYGYKRDFVIEYSKMSITPLEETESLEQLRVLENGYKIKVLETTHSLIGVDTQENLEQV 238
Query: 286 ESFMR 290
+F+R
Sbjct: 239 ITFIR 243
>gi|421077278|ref|ZP_15538249.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pelosinus
fermentans JBW45]
gi|392524666|gb|EIW47821.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pelosinus
fermentans JBW45]
Length = 240
Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 100/241 (41%), Positives = 150/241 (62%), Gaps = 4/241 (1%)
Query: 50 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQF 109
+V +IPAR++S+R GKPL +I GKPMIQ +ER+ LA ++VATD + E ++F
Sbjct: 3 IVCVIPARYSSTRLPGKPLADIAGKPMIQHVYERAALAKRPQRVIVATDHPLVLEAVKKF 62
Query: 110 GADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
G +V++TS GT+R E ++ D+++N+QGDEP+IEPE+ID + A PD
Sbjct: 63 GGEVLLTSADHPTGTDRLAEVAEQC-PDMDLIINVQGDEPMIEPEVIDQLASAFDNHPDL 121
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQS 229
+T +T + + P VK + D GYA+YFSR LIP+ ++ P H+GI +
Sbjct: 122 NMATLMTKMDTSEYQVPGAVKVITDLQGYALYFSRSLIPF---PRIEIGLPVFKHIGIYA 178
Query: 230 YDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFM 289
Y FL Y L PTPL+ E LEQL+ LE+GY++KVI+ + ++ GVD ED+EK+ +
Sbjct: 179 YRREFLLKYAKLAPTPLEKTESLEQLRALEHGYRIKVIETNFKSIGVDTIEDLEKVNLLL 238
Query: 290 R 290
+
Sbjct: 239 K 239
>gi|325103364|ref|YP_004273018.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pedobacter
saltans DSM 12145]
gi|324972212|gb|ADY51196.1| 3-deoxy-D-manno-octulosonatecytidylyltransferase [Pedobacter
saltans DSM 12145]
Length = 246
Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 108/246 (43%), Positives = 157/246 (63%), Gaps = 8/246 (3%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+++G+IPARFAS+RF GKPLV+I GK MIQR +E+S ATTL+ LVVATDD++I + +
Sbjct: 2 KILGVIPARFASTRFPGKPLVDIAGKTMIQRVYEKSSSATTLNDLVVATDDKRIYDTVKS 61
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
F +VIMTS ++GT+RC E +K+ YD ++NIQGDEPL++P I+ V +A D
Sbjct: 62 FNGNVIMTSSDHQSGTDRCAEIAEKV-TGYDAIINIQGDEPLVDPNQINLVAACFNSA-D 119
Query: 169 AVFSTAVTSLKPEDA-FDPNRVKCVVDNHGYAIYFSRGLIP----YNKSGKVNPQFPYLL 223
+T V +K +D F+ N K ++++ A+YFSR +P Y+K + +
Sbjct: 120 TQLATLVKKIKTQDELFNNNTPKVLLNSKNEALYFSRETVPFLRNYDKKDWL-KHHTFYK 178
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVE 283
H+GI Y N LK L + L++ E LEQL+ LENGY++KV D E +D PED+E
Sbjct: 179 HIGIYGYTVNVLKEISKLSISSLEMAESLEQLRWLENGYRIKVSFTDSETLAIDTPEDLE 238
Query: 284 KIESFM 289
K+ S +
Sbjct: 239 KVLSVI 244
>gi|260494706|ref|ZP_05814836.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Fusobacterium
sp. 3_1_33]
gi|260197868|gb|EEW95385.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Fusobacterium
sp. 3_1_33]
Length = 245
Score = 201 bits (510), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 106/247 (42%), Positives = 155/247 (62%), Gaps = 6/247 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR++S+R EGKPL I G MI+ ++R+K + LD L+VATDDE+I
Sbjct: 2 KFLGIIPARYSSTRLEGKPLKMIEGHTMIEWVYKRAK-KSNLDALIVATDDERIYNEVIN 60
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG IMT+++ NGT R E +K+ +D ++NIQGDEPLIE +I+ +++ + D
Sbjct: 61 FGGQAIMTNKNHTNGTSRIAEVCEKM-TGFDTIINIQGDEPLIEYGMINSLIETFKENKD 119
Query: 169 AVFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+T L E+ +PN VK V D + YAIYFSR +IPY + N Y H+GI
Sbjct: 120 LKMATLKHKLLDKEEIENPNNVKVVCDKNDYAIYFSRSVIPYPRK---NENIAYFKHIGI 176
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
Y +F+ Y + TPL+ E LEQL+VLENGYK+KV++ H GVD E++E++ +
Sbjct: 177 YGYKRDFVIEYSKMSITPLEETESLEQLRVLENGYKIKVLETTHSLIGVDTQENLEQVIT 236
Query: 288 FMRERNL 294
F+R+ N+
Sbjct: 237 FIRKNNI 243
>gi|404493584|ref|YP_006717690.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pelobacter
carbinolicus DSM 2380]
gi|123573916|sp|Q3A370.1|KDSB_PELCD RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|77545625|gb|ABA89187.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pelobacter
carbinolicus DSM 2380]
Length = 250
Score = 201 bits (510), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 106/248 (42%), Positives = 151/248 (60%), Gaps = 9/248 (3%)
Query: 50 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQF 109
+ +IPAR+ASSRF GKPL ILGK MIQR +ER+ A +D +VVATDD +IA+ F
Sbjct: 3 ITAVIPARYASSRFPGKPLARILGKTMIQRVYERTAQAACIDRVVVATDDSRIADVVSGF 62
Query: 110 GADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
G +V MT GT+R E +++ + ++VN+QGDEPLI+P +I+ V L P
Sbjct: 63 GGEVQMTRADHATGTDRLAEVTARIDTQ--LIVNVQGDEPLIDPHMIEAAVAPLSEDPAI 120
Query: 170 VFSTAVTS-LKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK-----SGKVNPQFPYLL 223
T T L ++ DPN VK V D G+A+YFSR IP+ + V+P L
Sbjct: 121 PMGTLKTPLLNWQEYRDPNVVKVVTDRRGFALYFSRAPIPHPRELAVDDSAVSPASMGLF 180
Query: 224 -HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDV 282
H+G+ Y +FL + GL +PL+ E LEQL+ LENGY ++V++ D + GVD PED+
Sbjct: 181 RHIGLYVYRKDFLLTFAGLPESPLERLEKLEQLRALENGYAIRVVETDRVSLGVDTPEDL 240
Query: 283 EKIESFMR 290
++E+ +R
Sbjct: 241 VRVEAHLR 248
>gi|330444559|ref|YP_004377545.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Chlamydophila
pecorum E58]
gi|328807669|gb|AEB41842.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Chlamydophila
pecorum E58]
Length = 260
Score = 201 bits (510), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 105/249 (42%), Positives = 151/249 (60%), Gaps = 9/249 (3%)
Query: 44 KNFRSRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIA 103
+ + + VG++PAR+ SSRF GKPL ILGK +I+R +E + +T+LD +VVAT+D +I
Sbjct: 10 QRIQGKRVGVLPARWGSSRFPGKPLSEILGKSLIRRAYENAASSTSLDAVVVATEDPRIM 69
Query: 104 ECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKAL 163
E FG ++TS C NGTER E ++ + +I+VNIQGDEP + P +ID ++ L
Sbjct: 70 EHVHSFGGCCVLTSPDCLNGTERTAEVAERYLNEAEIIVNIQGDEPCLAPSVIDALIGKL 129
Query: 164 QAAPDA-VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIP--YNKSGKVNPQFP 220
P+A V + S PE+ F +VKCV D G A+YFSR IP Y K P
Sbjct: 130 DECPEANVVTPVAISTDPEEIFTEKKVKCVFDQQGKALYFSRSPIPCVYKKPA------P 183
Query: 221 YLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPE 280
LH+G+ ++ FL Y L PT L EDLEQL++LE+G + V V+ ++ VD PE
Sbjct: 184 RYLHIGVYAFRKEFLFQYVRLLPTALNEAEDLEQLRILESGGHIYVCVVEAKSPSVDYPE 243
Query: 281 DVEKIESFM 289
D+ K+E ++
Sbjct: 244 DITKVEKYI 252
>gi|297568921|ref|YP_003690265.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Desulfurivibrio
alkaliphilus AHT2]
gi|296924836|gb|ADH85646.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Desulfurivibrio
alkaliphilus AHT2]
Length = 253
Score = 201 bits (510), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 104/245 (42%), Positives = 150/245 (61%), Gaps = 3/245 (1%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+VV +IPAR+ S+RFEGKPL I GKPMIQR +ER+K L + VATDD++IA+C +
Sbjct: 10 QVVAVIPARYQSNRFEGKPLALIKGKPMIQRVYERAKAVPMLSRVAVATDDQRIADCVRA 69
Query: 109 FGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
FG + +MT +GT+R EA+ ++ ++D+VVNIQGD+PL +P ++ V L A P
Sbjct: 70 FGGEAVMTRSDHVSGTDRLAEAVTIMDIDEHDVVVNIQGDQPLFDPAVVGQVAGPLLADP 129
Query: 168 DAVFSTAVTS-LKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLG 226
+T + ++PE+ DPN VK V D HG A+YFSR IP+ + Y HLG
Sbjct: 130 ALPMATLIYRIIRPEEINDPNHVKTVFDRHGRALYFSRSPIPHQRDPDGGSP-TYYKHLG 188
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIE 286
+Y FL + GL + E LEQL+ LE GY ++V+ +H++ VD P D+++ E
Sbjct: 189 FYAYRKGFLLTFVGLPEGEWEYFEKLEQLRALEYGYTIQVVLTEHDSVEVDTPADLKRAE 248
Query: 287 SFMRE 291
RE
Sbjct: 249 ELFRE 253
>gi|116625271|ref|YP_827427.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Candidatus
Solibacter usitatus Ellin6076]
gi|122252388|sp|Q01T78.1|KDSB_SOLUE RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|116228433|gb|ABJ87142.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Candidatus
Solibacter usitatus Ellin6076]
Length = 252
Score = 201 bits (510), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 103/243 (42%), Positives = 149/243 (61%), Gaps = 5/243 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+++G+IPARF+S+RF GK L I K M+Q +ER+ LAT L ++ATDDE++ +
Sbjct: 4 KILGVIPARFSSTRFPGKVLAQIANKTMLQHVYERAGLATYLTSTIIATDDERVYTAAKS 63
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FGA V MT +GT+R E + +I+VNIQGDEPLI+P ID V L PD
Sbjct: 64 FGARVRMTRADHLSGTDRVAEVASA--ENAEIIVNIQGDEPLIDPAAIDAAVLPLVHEPD 121
Query: 169 AVFSTAVTSLK-PEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+ T ++ P + DPN VK V D+ G AIYFSR IP+++ + PY H+G+
Sbjct: 122 VLMGTLKKRIEDPREIVDPNVVKVVTDHAGDAIYFSRCPIPFDRDRSADT--PYFKHVGL 179
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
Y +FL Y L PL+ E LEQL+ LENGY+++V++ ++E+ GVD PED+E++
Sbjct: 180 YVYQRDFLLSYSTLPVGPLERSERLEQLRALENGYRIRVVETEYESLGVDTPEDLERVSR 239
Query: 288 FMR 290
+
Sbjct: 240 LFK 242
>gi|389579790|ref|ZP_10169817.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Desulfobacter
postgatei 2ac9]
gi|389401425|gb|EIM63647.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Desulfobacter
postgatei 2ac9]
Length = 242
Score = 200 bits (509), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 99/242 (40%), Positives = 148/242 (61%), Gaps = 4/242 (1%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
+ +IPARF SSR GKPLVNI GKPMIQR +E+S+ ++ + +VATDDE+I + FG
Sbjct: 3 IAVIPARFGSSRLGGKPLVNIAGKPMIQRVFEQSQKSSVVTRTIVATDDERIVNAVKAFG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKL-EKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
D +MTS++CR+GT+R E + L DI++NIQGD+P+ P+ +D +++ P
Sbjct: 63 GDAVMTSDTCRSGTDRVAETAKMLGAAPEDIIINIQGDQPVFNPKSLDDLIRPFDEDPGL 122
Query: 170 VFSTAVTSLK-PEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQ 228
ST +K P + DP VK V + G+A+YFSR IP+ + G+ + Y HLG
Sbjct: 123 AMSTLAYKIKNPREITDPKDVKVVFNRQGFAMYFSRAQIPFPRDGQTD--VDYYKHLGFY 180
Query: 229 SYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESF 288
+Y FL L + E LEQL+VLE G+ +KV +++ +D PED+E++E+
Sbjct: 181 AYTKAFLDQIVTLDTGTCEQVEKLEQLRVLEYGFPIKVAVTQYDSPEIDLPEDIERVEAM 240
Query: 289 MR 290
+R
Sbjct: 241 LR 242
>gi|373488477|ref|ZP_09579141.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Holophaga
foetida DSM 6591]
gi|372005422|gb|EHP06058.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Holophaga
foetida DSM 6591]
Length = 260
Score = 200 bits (508), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 101/259 (38%), Positives = 155/259 (59%), Gaps = 12/259 (4%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
R + ++P+R+ ++RF GKPL I G+PMIQR W+ +K A +D +VVATDDE+I
Sbjct: 2 RTLAVLPSRYKATRFPGKPLAPIAGQPMIQRVWQAAKAAEGVDRVVVATDDERIQAAVLA 61
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG +V+MT + +GT+R AL+ L + +D++VNIQGDEP + PE + +V+ + PD
Sbjct: 62 FGGEVVMTDPALPSGTDRVAAALEALGESFDVIVNIQGDEPAMHPETVGVLVRLMAENPD 121
Query: 169 AVFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ--FPYL--- 222
T E+ F PN VK + ++ G+A+YFSR IPY ++ +V Q P++
Sbjct: 122 LPLGTVACPFSNTEELFSPNIVKVITNDLGHALYFSRSPIPYLRNSQVFEQDFRPWMKPE 181
Query: 223 ------LHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGV 276
HLG+ +Y L+ + L P PL+ E LEQL+ L +G M V + + + GV
Sbjct: 182 QLALYKRHLGLYAYRPEALRAFMKLPPHPLEQAEMLEQLRALAHGMTMGVAQTPYLSLGV 241
Query: 277 DAPEDVEKIESFMRERNLS 295
D PEDV +E+ ++ER L+
Sbjct: 242 DTPEDVPLVEALLKERGLA 260
>gi|336400637|ref|ZP_08581413.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Fusobacterium sp.
21_1A]
gi|336162353|gb|EGN65330.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Fusobacterium sp.
21_1A]
Length = 245
Score = 200 bits (508), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 106/247 (42%), Positives = 154/247 (62%), Gaps = 6/247 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR++S+R EGKPL I G MI+ ++R+K + LD L+VATDDE+I
Sbjct: 2 KFLGIIPARYSSTRLEGKPLKMIEGHTMIEWVYKRAK-KSNLDALIVATDDERIYNEVIN 60
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG IMT+++ NGT R E +K+ +D +VNIQGDEPLIE +I+ +++ + D
Sbjct: 61 FGGQAIMTNKNHANGTSRIAEVCEKM-TDFDTIVNIQGDEPLIEYGMINSLIETFKENKD 119
Query: 169 AVFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+T L E+ +PN VK V D + YAIYFSR +IPY + N Y H+GI
Sbjct: 120 LKMATLKHKLLDKEEIENPNNVKVVCDKNDYAIYFSRSVIPYPRK---NENIAYFKHIGI 176
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
Y +F+ Y + TPL+ E LEQL+VLENGYK+KV++ H GVD E++E++
Sbjct: 177 YGYKRDFVIEYSKMSATPLEETESLEQLRVLENGYKIKVLETTHSLIGVDTQENLEQVIK 236
Query: 288 FMRERNL 294
F+++ N+
Sbjct: 237 FIKKNNI 243
>gi|95928731|ref|ZP_01311477.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Desulfuromonas
acetoxidans DSM 684]
gi|95135076|gb|EAT16729.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Desulfuromonas
acetoxidans DSM 684]
Length = 255
Score = 200 bits (508), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 101/243 (41%), Positives = 152/243 (62%), Gaps = 8/243 (3%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
R+ IIPAR+ASSRF GKPL +ILGKPM+Q +E++ A +D ++VATDD +I E +
Sbjct: 2 RITAIIPARYASSRFPGKPLADILGKPMVQWVYEQTVRAQLVDDVLVATDDVRIVETVEA 61
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG MTS+ GT+R E +L+ D+VVN+QGDEPLI+P +ID + L+
Sbjct: 62 FGGRACMTSDQHETGTDRLAEVAAQLD--CDLVVNVQGDEPLIDPRMIDQAIAPLKEDAT 119
Query: 169 AVFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK-----SGKVNPQFPYL 222
T + S+ + + +PN VK V ++ G A+YFSR IP+++ + + Q
Sbjct: 120 IAMGTLMISIAESREYLNPNVVKVVTNSQGDALYFSRAPIPWSRDYSATAAETFDQIRAF 179
Query: 223 LHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDV 282
H+G+ Y +FL YP L TPL+ E LEQL+ LENGY+++V++ D ++ GVD P+D+
Sbjct: 180 KHVGLYVYRRDFLLAYPTLTATPLEQMEKLEQLRALENGYRIRVVETDLQSQGVDTPQDL 239
Query: 283 EKI 285
++
Sbjct: 240 LRV 242
>gi|374630651|ref|ZP_09703036.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Methanoplanus
limicola DSM 2279]
gi|373908764|gb|EHQ36868.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Methanoplanus
limicola DSM 2279]
Length = 249
Score = 200 bits (508), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 110/247 (44%), Positives = 155/247 (62%), Gaps = 5/247 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
++VGIIPAR SSRF+GKPLV I GKPMI+ + RS ++ TLD L VAT D++I E ++
Sbjct: 2 KIVGIIPARMGSSRFQGKPLVPICGKPMIEHVYRRSAMSLTLDDLYVATCDQEIYETVRE 61
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG IMTS T+R +A++ +E DI+VNIQGDEPLI PE+ID ++ L +
Sbjct: 62 FGGKAIMTSNCHERCTDRIAQAVENIEA--DIIVNIQGDEPLIFPEMIDQALEPLLSDSA 119
Query: 169 AVFSTAVTSLKPEDAF-DPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
V S + + E F DPN VK VVD G+A+YFSR IP K G + F L + I
Sbjct: 120 IVCSNLMADINNEKDFEDPNEVKVVVDLDGFALYFSREPIPSRKKG--SSDFVGLKQVCI 177
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
+ +FL Y L PTPL++ E ++ L+ +E+GYK+K++K +E + VD ED+ +E
Sbjct: 178 IPFRRDFLFKYTKLSPTPLEIIESVDMLRAIEHGYKVKMVKTPYETYSVDTIEDLMHVEE 237
Query: 288 FMRERNL 294
M++ L
Sbjct: 238 IMKDDEL 244
>gi|260424774|ref|ZP_05733246.2| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Dialister
invisus DSM 15470]
gi|260403148|gb|EEW96695.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Dialister
invisus DSM 15470]
Length = 248
Score = 200 bits (508), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 107/246 (43%), Positives = 152/246 (61%), Gaps = 4/246 (1%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
++ IIP+R+AS+R GKPL I GK +++R +ER+ LA D ++VATD + I + +
Sbjct: 7 KIACIIPSRYASTRLPGKPLRMIAGKTLVRRVYERAILAMLPDVVIVATDHKDIEKEVRS 66
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG DV+MTS GT+R E + L YDI+VN+QGDEPLI+P +ID + K L +
Sbjct: 67 FGGDVVMTSADHPTGTDRLAEVAESL-PDYDIIVNVQGDEPLIDPNVIDLLAKTLVERAE 125
Query: 169 AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQ 228
T T LK +D DP+ VK VV+ G A+YFSR LIPY + V P L H+GI
Sbjct: 126 LDMVTVATPLKNDDYEDPSAVKVVVNQKGEALYFSRALIPYPRHDFV---VPALKHVGIY 182
Query: 229 SYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESF 288
+Y FL Y + TPL++ E LEQL+ LE+G+K+ VI V+ E G+D ED++K+ ++
Sbjct: 183 AYRREFLLKYAHMKQTPLEMTESLEQLRALESGHKIGVITVETEDIGIDTEEDLKKVNAY 242
Query: 289 MRERNL 294
L
Sbjct: 243 FERSQL 248
>gi|346225731|ref|ZP_08846873.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Anaerophaga
thermohalophila DSM 12881]
Length = 252
Score = 199 bits (507), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 107/246 (43%), Positives = 159/246 (64%), Gaps = 11/246 (4%)
Query: 50 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQF 109
++GIIPAR+AS+RF GKPL +I GKPMIQR +E++ A T LVVATDD +I E + F
Sbjct: 6 ILGIIPARYASTRFPGKPLADIGGKPMIQRVYEQASKALT--QLVVATDDTRIMEAVKNF 63
Query: 110 GADVIMTSESCRNGTERCNEALQKLE----KKYDIVVNIQGDEPLIEPEIIDGVVKALQA 165
G +MTS+ R+GT+RC EAL K E ++Y +VVNIQGDEP I+P I+ +V
Sbjct: 64 GGVCVMTSDKHRSGTDRCTEALDKTEALNNRQYQVVVNIQGDEPFIDPRQIEKLVMCFYN 123
Query: 166 APDAVFSTAVTSLK-PEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS---GKVNPQFPY 221
A + +T V LK D FDPN+ K V+++ A+YFSR IP+ ++ + + Y
Sbjct: 124 AETEI-ATLVKPLKNNNDLFDPNKPKVVLNSSSQALYFSRSPIPHLRNFPKEEWHQHHNY 182
Query: 222 LLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPED 281
+H+G+ +Y ++ L+ L P PL++ E LEQL+ LENGY + K + E+ +D+P D
Sbjct: 183 YIHIGLYAYRTDVLREITLLKPAPLEIAESLEQLRWLENGYAITTRKTEFESWSIDSPMD 242
Query: 282 VEKIES 287
+++++S
Sbjct: 243 IDELKS 248
>gi|451948759|ref|YP_007469354.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Desulfocapsa
sulfexigens DSM 10523]
gi|451908107|gb|AGF79701.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Desulfocapsa
sulfexigens DSM 10523]
Length = 255
Score = 199 bits (507), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 104/248 (41%), Positives = 156/248 (62%), Gaps = 2/248 (0%)
Query: 44 KNFRSRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIA 103
K R +VV IIPAR+ S+RFEGKPL I GKPMIQ ER+K L +VVATDD++IA
Sbjct: 5 KQHRVKVVAIIPARYHSNRFEGKPLALINGKPMIQHVVERAKSVQLLSRVVVATDDQRIA 64
Query: 104 ECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKA 162
+C FG + ++T ++ +G++R EA + L+ ++D+VVNIQGD+PL + +I+ V
Sbjct: 65 DCVAGFGGEYVITRKNHVSGSDRLAEAAELLDISEHDVVVNIQGDQPLFDAAVIEQVAGP 124
Query: 163 LQAAPDAVFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPY 221
L + P ST + + +PE+ DPN VK V D+ YA+YFSR +P+ ++ + Y
Sbjct: 125 LLSDPSLPMSTLIYKIIRPEEINDPNHVKTVFDHENYALYFSRSPVPFQRNPEEGIVPTY 184
Query: 222 LLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPED 281
HLG +Y FL + L + E LEQL+ LE GY++KVI +H++ VD PED
Sbjct: 185 YKHLGFYAYRKGFLLTFVALPEGEWERFEKLEQLRALEYGYRIKVILTEHDSIEVDTPED 244
Query: 282 VEKIESFM 289
++++E ++
Sbjct: 245 LKRVEEYI 252
>gi|308535252|ref|YP_002138413.2| 3-deoxy-manno-octulosonate cytidylyltransferase [Geobacter
bemidjiensis Bem]
gi|347595661|sp|B5E8N2.2|KDSB_GEOBB RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|308052597|gb|ACH38617.2| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Geobacter
bemidjiensis Bem]
Length = 255
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 101/246 (41%), Positives = 152/246 (61%), Gaps = 11/246 (4%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
++ +IPAR+AS+RFEGK L +I+G+PM+Q +ER+ AT + ++VATDDE+IA +
Sbjct: 6 KITAVIPARYASTRFEGKALADIMGRPMVQHVYERAAKATLVSEVIVATDDERIAAAVRA 65
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG V MTS + GT+R E +++ DI+VN+QGDEPLI+P +ID ++ L P
Sbjct: 66 FGGRVEMTSPTHETGTDRLAEVAARIDA--DIIVNVQGDEPLIDPAMIDEAIRPLLDDPS 123
Query: 169 AVFSTAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK--------SGKVNPQF 219
+T +K D PN VK V D G +YFSR +P+ + V+ +
Sbjct: 124 IPMATLKCRIKTLHDFLSPNVVKVVSDPTGNVLYFSRSPLPFFRDKWNDLKDDAFVSGKL 183
Query: 220 PYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAP 279
H+G+ Y FL ++ GL PT L+L E LEQL+VLENGY++K+++ + E+ GVD P
Sbjct: 184 LCYKHVGLYVYRREFLPVFAGLQPTYLELAEKLEQLRVLENGYRIKIVETEFESIGVDTP 243
Query: 280 EDVEKI 285
D++K+
Sbjct: 244 ADLDKV 249
>gi|187734682|ref|YP_001876794.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Akkermansia
muciniphila ATCC BAA-835]
gi|187424734|gb|ACD04013.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Akkermansia
muciniphila ATCC BAA-835]
Length = 249
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 107/243 (44%), Positives = 150/243 (61%), Gaps = 9/243 (3%)
Query: 50 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQF 109
++G+IP+R+ SSRF GKPL I GKP++Q WER + LD + +ATDD++I + F
Sbjct: 9 IIGLIPSRWGSSRFPGKPLHPIAGKPLVQHVWERVCRCSRLDAIAIATDDQRIFDAAVSF 68
Query: 110 GADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
GA IMTS +G++R EA++ VVNIQGDEPLI+P +ID + +AL + D
Sbjct: 69 GARAIMTSPDHPSGSDRLAEAVRSFPAATH-VVNIQGDEPLIDPALIDRLAEALVS--DE 125
Query: 170 VFSTAVTSL---KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLG 226
S A + ED +PN VK + +G A+YFSR +IPY + +V P L HLG
Sbjct: 126 ALSMATVACPISTREDLDNPNIVKVALARNGDALYFSRSVIPYARHPRVAPP---LRHLG 182
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIE 286
I +Y +FL+ Y PTPL+ E LEQL+ LENG +++VI DH + GVD PE E++E
Sbjct: 183 IYAYRRDFLENYVRWAPTPLEQTESLEQLRALENGARIRVILTDHVSVGVDTPEQAEQVE 242
Query: 287 SFM 289
+
Sbjct: 243 QIL 245
>gi|375087171|ref|ZP_09733555.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Megamonas
funiformis YIT 11815]
gi|374562261|gb|EHR33592.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Megamonas
funiformis YIT 11815]
Length = 245
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 104/245 (42%), Positives = 148/245 (60%), Gaps = 8/245 (3%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+++ +IPAR+AS+R GKPL +I GKPMI R +ER AT ++ A DDE++ E +
Sbjct: 2 KIICVIPARYASTRLPGKPLADIAGKPMIVRVYERVLNATKPAEVIAAVDDERVYEAVVK 61
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
G IMT+++ GT+R E QK D+++N+QGDEPLI+P+IID + + +
Sbjct: 62 AGGKAIMTAKNHPTGTDRLAEVAQKCPDA-DVIINVQGDEPLIDPQIIDDLAQEFLNDEN 120
Query: 169 AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK--SGKVNPQFPYLLHLG 226
+T T +K E+ P VK + D +GYA+YFSR LIPY + +G V H+G
Sbjct: 121 LKMATVKTPMKEEEKAKPGNVKVITDKNGYALYFSRSLIPYPREDTGVV-----VYKHIG 175
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIE 286
I Y +FL Y + PTPL+ E LEQL+ LENGYK+KVI D GVD ED+E++
Sbjct: 176 IYGYRRDFLLQYAKMQPTPLEQTESLEQLRALENGYKIKVIATDKHFVGVDTKEDLEEVN 235
Query: 287 SFMRE 291
+E
Sbjct: 236 KIYQE 240
>gi|116747462|ref|YP_844149.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Syntrophobacter
fumaroxidans MPOB]
gi|166220472|sp|A0LE62.1|KDSB_SYNFM RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|116696526|gb|ABK15714.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Syntrophobacter
fumaroxidans MPOB]
Length = 250
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 113/242 (46%), Positives = 152/242 (62%), Gaps = 9/242 (3%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
R+VGIIPAR+ SSRF GKPLV+ILGKPMI+ +ERS A LD L+VATDD +IA
Sbjct: 2 RIVGIIPARYQSSRFPGKPLVDILGKPMIRHVYERSARAGCLDRLIVATDDARIAAAVAG 61
Query: 109 FGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQA-- 165
FG + ++T +GT+R EA + LE DIVVNIQGDEPL+ +I+ +V+ALQ
Sbjct: 62 FGGEALLTRADHASGTDRLAEAARLLELDGADIVVNIQGDEPLVNHRMIEALVEALQCDR 121
Query: 166 -APDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVN-PQFPYLL 223
P A + SL +D +PN VK V+D A+YFSR IP+ + G + P F L
Sbjct: 122 HCPMATLAFPSESL--QDYNNPNVVKVVLDRGLRALYFSRAPIPFVRDGAADAPAF--LK 177
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVE 283
HLG +Y ++FL+ + L P L+ E LEQL+ LE+GY ++V + GVD PED+E
Sbjct: 178 HLGFYAYSASFLQTFSRLPPGRLEGLEKLEQLRALEHGYGIRVALSPVDTRGVDTPEDLE 237
Query: 284 KI 285
+
Sbjct: 238 AV 239
>gi|218777975|ref|YP_002429293.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase
[Desulfatibacillum alkenivorans AK-01]
gi|226724280|sp|B8FKL0.1|KDSB_DESAA RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|218759359|gb|ACL01825.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase
[Desulfatibacillum alkenivorans AK-01]
Length = 245
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 104/246 (42%), Positives = 153/246 (62%), Gaps = 4/246 (1%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+VV IIPAR+ S+RFE KPL I GKPMIQR +ER+ A+++ + VATDDE+I ++
Sbjct: 2 KVVVIIPARYGSTRFEAKPLALIAGKPMIQRVYERAAAASSVTGVAVATDDERIVSAVEK 61
Query: 109 FGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
FG +MTS++CR+GT+R EA + L DIVVN+QGD+P+ +PE ID V L P
Sbjct: 62 FGGKAVMTSDACRSGTDRVFEAGRTLGLTGSDIVVNVQGDQPVFDPECIDEVTAPLIGDP 121
Query: 168 DAVFST-AVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLG 226
+T A + + DP VK V D G+A+YFSR IP+++ G N +F HLG
Sbjct: 122 GTGMTTLAFAIVNEREMTDPKDVKMVFDQDGWALYFSRATIPHDRDG--NMEFDTYKHLG 179
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIE 286
+ +Y +FL + L L+ E LEQL+ LE G +K + +++ VD PED+ +IE
Sbjct: 180 VYAYTMDFLAEFCSLPEGHLEKIEKLEQLRALEYGLGIKTVVTAYDSPEVDLPEDIARIE 239
Query: 287 SFMRER 292
+ ++++
Sbjct: 240 ALLKDQ 245
>gi|402834304|ref|ZP_10882907.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Selenomonas sp.
CM52]
gi|402278600|gb|EJU27659.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Selenomonas sp.
CM52]
Length = 244
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 104/250 (41%), Positives = 153/250 (61%), Gaps = 10/250 (4%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
R + +IPAR+AS+R GKPL +I GKPMI R ER+ A + ++VATDD++I + +
Sbjct: 2 RTLCVIPARYASTRLPGKPLADICGKPMICRVLERASRAQKPEKVIVATDDQRIYDAVRA 61
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
G++ I+T GT+R E + + D++VN+QGDEPLIEP +ID ++ + +
Sbjct: 62 EGSEAILTRADHPTGTDRLAEVAEAY-PEVDLIVNVQGDEPLIEPSVIDDLIAPFEMDEN 120
Query: 169 AVFSTAVTSLKPEDA---FDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHL 225
+T +T + +DA +PN VK VVD GYA+YFSR L+PY ++ P H+
Sbjct: 121 LPMATVMTRM--DDAAEQLNPNNVKVVVDKLGYALYFSRSLVPYPRAAA----GPVYKHI 174
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKI 285
GI +Y +FL Y L PTPL+ E LEQL+ LENGY ++V++ D GVD PED+ +
Sbjct: 175 GIYAYRRDFLLRYARLEPTPLERAESLEQLRALENGYGIRVLETDCRFVGVDTPEDLALV 234
Query: 286 ESFMRERNLS 295
RE+ L+
Sbjct: 235 NKIYREQGLA 244
>gi|281420130|ref|ZP_06251129.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Prevotella copri
DSM 18205]
gi|281405930|gb|EFB36610.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Prevotella copri
DSM 18205]
Length = 247
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 105/250 (42%), Positives = 155/250 (62%), Gaps = 11/250 (4%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR+AS+RF GKPL + GKP+IQ +E K+A+ L+ VATDDE+I +
Sbjct: 2 KFIGIIPARYASTRFPGKPLAMLDGKPVIQHVYE--KVASCLEAAYVATDDERIFNAVEA 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQ--AA 166
FG +MT + ++GT+R EA++K+ +D++VN+QGDEP ++ ++ + +
Sbjct: 60 FGGKAVMTRKDHKSGTDRIEEAIEKIGGDWDVIVNVQGDEPFVDKSQLETICQCFDDPTT 119
Query: 167 PDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ----FPYL 222
A A TS+ E +PN K VVDN G+A+YFSR +IPY + GK + FPYL
Sbjct: 120 QIATLGKAFTSM--EAVKNPNSPKIVVDNQGFAMYFSRSIIPYVR-GKEEEEWLKSFPYL 176
Query: 223 LHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDV 282
HLGI +Y LK + L++ E LEQL+ L+NGYK+KV D E G+D PED+
Sbjct: 177 KHLGIYAYRKEVLKEVTKQPQSSLEIAESLEQLRWLQNGYKIKVGTTDVETVGIDTPEDL 236
Query: 283 EKIESFMRER 292
++ E F++ R
Sbjct: 237 QRAEDFLKNR 246
>gi|315634135|ref|ZP_07889424.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Aggregatibacter
segnis ATCC 33393]
gi|315477385|gb|EFU68128.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Aggregatibacter
segnis ATCC 33393]
Length = 257
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 110/251 (43%), Positives = 158/251 (62%), Gaps = 11/251 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR+ASSR GKPL +I GKPMIQ +E++K + +++ATD+E++A + FGA+
Sbjct: 7 IIPARYASSRLPGKPLADIAGKPMIQHVFEQAK-QSGASRIIIATDNEQVAAATKNFGAE 65
Query: 113 VIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MT+ES +GTER E ++KL +I+VNIQGDEPLI P I+ V + L P +
Sbjct: 66 VCMTAESHNSGTERLAEVVEKLAIPDNEIIVNIQGDEPLIPPVIVKQVAENLANYPVNMA 125
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS--------GKVNPQFPYLL 223
S AV +PE+ F+PN VK + D GY +YFSR +IP+++ K+ YL
Sbjct: 126 SLAVNIDEPEELFNPNVVKVLTDKDGYVLYFSRAVIPWDRDQFAQMDDVAKLQLNTQYLR 185
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDV 282
H+GI +Y + F+K Y PT L+ E LEQL+VL NG K+ V + + A GVD ED+
Sbjct: 186 HIGIYAYRAGFIKQYVQWQPTALEHIEKLEQLRVLWNGEKIHVELAKEVPAVGVDTTEDL 245
Query: 283 EKIESFMRERN 293
EK+ S + +++
Sbjct: 246 EKVRSILAKKS 256
>gi|345880285|ref|ZP_08831840.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Prevotella oulorum
F0390]
gi|343923639|gb|EGV34325.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Prevotella oulorum
F0390]
Length = 247
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 104/248 (41%), Positives = 156/248 (62%), Gaps = 7/248 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +G+IPAR+AS+RF GKPL + GKP+IQ +E ++A LD VATDDE+I +
Sbjct: 2 KFIGLIPARYASTRFPGKPLALLAGKPVIQHVYE--QVAPVLDAAFVATDDERIYQTVLD 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG IMTS + +GT+R EAL+K+ +++D+V+NIQGDEP I+ E I + + + +
Sbjct: 60 FGGKAIMTSANHPSGTDRIAEALEKVGEEFDVVINIQGDEPFIQKEQITSLCRCFKNSHT 119
Query: 169 AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPY----NKSGKVNPQFPYLLH 224
+ + E +PN K V DN GYA+YFSR +IP+ K+ +N +L H
Sbjct: 120 QIATLGKPFETIEALENPNSPKIVTDNQGYALYFSRSIIPFIRNVEKADWLN-HHTFLKH 178
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEK 284
LGI +Y S+ LK L + L+ E LEQL+ L+NGYK++V+ D E G+D P+D+++
Sbjct: 179 LGIYAYRSHVLKEITQLPMSSLERAESLEQLRWLQNGYKIQVVTTDFETVGIDTPDDLQR 238
Query: 285 IESFMRER 292
E+F+R R
Sbjct: 239 AEAFIRNR 246
>gi|329942937|ref|ZP_08291716.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Chlamydophila
psittaci Cal10]
gi|332287528|ref|YP_004422429.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Chlamydophila
psittaci 6BC]
gi|384450683|ref|YP_005663283.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Chlamydophila
psittaci 6BC]
gi|384451682|ref|YP_005664280.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Chlamydophila
psittaci 01DC11]
gi|384452656|ref|YP_005665253.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Chlamydophila
psittaci 08DC60]
gi|384453632|ref|YP_005666228.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Chlamydophila
psittaci C19/98]
gi|384454611|ref|YP_005667206.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Chlamydophila
psittaci 02DC15]
gi|392376762|ref|YP_004064540.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydophila
psittaci RD1]
gi|406592469|ref|YP_006739649.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Chlamydia
psittaci CP3]
gi|407454139|ref|YP_006733247.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Chlamydia
psittaci 84/55]
gi|407455426|ref|YP_006734317.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Chlamydia
psittaci GR9]
gi|407456829|ref|YP_006735402.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Chlamydia
psittaci VS225]
gi|407458162|ref|YP_006736467.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Chlamydia
psittaci WS/RT/E30]
gi|407460782|ref|YP_006738557.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Chlamydia
psittaci WC]
gi|449071240|ref|YP_007438320.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydophila
psittaci Mat116]
gi|313848105|emb|CBY17104.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydophila
psittaci RD1]
gi|325507179|gb|ADZ18817.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Chlamydophila
psittaci 6BC]
gi|328815197|gb|EGF85186.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Chlamydophila
psittaci Cal10]
gi|328914777|gb|AEB55610.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Chlamydophila
psittaci 6BC]
gi|334692413|gb|AEG85632.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Chlamydophila
psittaci C19/98]
gi|334693392|gb|AEG86610.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Chlamydophila
psittaci 01DC11]
gi|334694368|gb|AEG87585.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Chlamydophila
psittaci 02DC15]
gi|334695345|gb|AEG88561.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Chlamydophila
psittaci 08DC60]
gi|405780898|gb|AFS19648.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Chlamydia
psittaci 84/55]
gi|405781969|gb|AFS20718.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Chlamydia
psittaci GR9]
gi|405784090|gb|AFS22837.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Chlamydia
psittaci VS225]
gi|405785204|gb|AFS23950.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Chlamydia
psittaci WS/RT/E30]
gi|405787521|gb|AFS26265.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Chlamydia
psittaci WC]
gi|405788341|gb|AFS27084.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Chlamydia
psittaci CP3]
gi|449039748|gb|AGE75172.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydophila
psittaci Mat116]
Length = 254
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 103/247 (41%), Positives = 152/247 (61%), Gaps = 5/247 (2%)
Query: 44 KNFRSRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIA 103
+ F S+ VG++PAR+ S RF GKPL ILGK +IQRT+E + TLD +VVATDD++I
Sbjct: 4 QTFISKKVGVLPARWGSVRFPGKPLAMILGKSLIQRTYENIIQSETLDKVVVATDDQRIM 63
Query: 104 ECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKAL 163
+ FG + +MTS C NGTER E + + + +I+VNIQGDEP + ++D +V+ L
Sbjct: 64 DHVIDFGGECVMTSPECANGTERMAETVSRYFPEAEIMVNIQGDEPCLRHTVVDALVRKL 123
Query: 164 QAAPDAVFSTAVT-SLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYL 222
+ P+ T V + P + +VKCV D +G A+YFSR IP+ + + P
Sbjct: 124 EENPEIHMVTPVAQTTDPHEILTNQKVKCVFDKNGKALYFSRSAIPH----ILKKETPIY 179
Query: 223 LHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDV 282
LH+G+ +Y + L Y P+PL EDLEQL+VLE+G + V V+ ++ VD PED+
Sbjct: 180 LHIGVYAYRRSALFSYIASAPSPLSQAEDLEQLRVLEHGGSIHVCVVEAKSPSVDYPEDI 239
Query: 283 EKIESFM 289
K+E ++
Sbjct: 240 NKVEEYL 246
>gi|373455975|ref|ZP_09547790.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Dialister
succinatiphilus YIT 11850]
gi|371934318|gb|EHO62112.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Dialister
succinatiphilus YIT 11850]
Length = 243
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 108/245 (44%), Positives = 150/245 (61%), Gaps = 5/245 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ V IIP+R+AS+R GKPL I G+ ++ R +ER+ LA + ++VATD E I + +
Sbjct: 2 KAVCIIPSRYASTRLPGKPLRMIAGETLVHRVYERALLAKVPEQVIVATDHEDIEKEVKA 61
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG V+MTS + GT+R E K +YDI+VN+QGDEPLI+P++IDG+ K L D
Sbjct: 62 FGGHVVMTSVNHPTGTDRLAEVAAKF-PQYDIIVNVQGDEPLIDPDVIDGLAKDLMDHED 120
Query: 169 AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQ 228
+T T L+ E+ DP+ VK VV+ G A+YFSR LIPY + P L H+GI
Sbjct: 121 LDMATVATPLRKEEYDDPSAVKVVVNRKGEALYFSRSLIPYPRHDFAEPP---LKHVGIY 177
Query: 229 SYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESF 288
+Y +FL Y + TPL+ E LEQL+ LE GYK+ VI V E G+D D++K +
Sbjct: 178 AYRRDFLLAYAKMEQTPLEKTESLEQLRALEMGYKIGVISVKTEDIGIDTEADLKKANEY 237
Query: 289 MRERN 293
ERN
Sbjct: 238 F-ERN 241
>gi|260891366|ref|ZP_05902629.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptotrichia
hofstadii F0254]
gi|260858749|gb|EEX73249.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptotrichia
hofstadii F0254]
Length = 250
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 101/248 (40%), Positives = 153/248 (61%), Gaps = 2/248 (0%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+++G+IPAR+ASSRFEGKPL +I G MI+ ++R+K A +D +VVATDDE+I + ++
Sbjct: 2 KILGVIPARYASSRFEGKPLKDICGHAMIEWVYKRAKNAD-IDEIVVATDDERIFKAVEK 60
Query: 109 FGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
FG +V+MTSE+ +NGT R E + K E K YD ++NIQGDEPLI+ E I+ + +
Sbjct: 61 FGGNVVMTSENHQNGTSRIIEVINKKEYKNYDFIINIQGDEPLIDIESINILANNYRNEK 120
Query: 168 DAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+ + + +PN VK + D + AIYFSR +IPY + + Y H+GI
Sbjct: 121 SEIVTLKQEMKSQNEIENPNHVKVITDFNNNAIYFSRSVIPYERDKNNSQNIKYFKHVGI 180
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
Y + FL L L+ E LEQL+ +ENGYK+KV++ + GVD ED++++
Sbjct: 181 YGYTAKFLNELKNLKEGVLEKIESLEQLRFIENGYKIKVLETKSQVIGVDTQEDLKEVVK 240
Query: 288 FMRERNLS 295
F+ E ++
Sbjct: 241 FITENGIT 248
>gi|406593538|ref|YP_006740717.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Chlamydia
psittaci NJ1]
gi|405789410|gb|AFS28152.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Chlamydia
psittaci NJ1]
Length = 254
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 103/247 (41%), Positives = 151/247 (61%), Gaps = 5/247 (2%)
Query: 44 KNFRSRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIA 103
+ F S+ VG++PAR+ S RF GKPL ILGK +IQRT+E + TLD +VVATDD++I
Sbjct: 4 QTFISKKVGVLPARWGSVRFAGKPLAMILGKSLIQRTYENIIQSETLDKVVVATDDQRIM 63
Query: 104 ECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKAL 163
+ FG + +MTS C NGTER E + + + +I+VNIQGDEP + ++D +V+ L
Sbjct: 64 DHVIDFGGECVMTSPECANGTERMAETVSRYFPEAEIMVNIQGDEPCLRHTVVDALVRKL 123
Query: 164 QAAPDAVFSTAVT-SLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYL 222
+ P+ T V + P + +VKCV D +G A+YFSR IP+ + P
Sbjct: 124 EENPEIHMVTPVAQTTDPHEILTNQKVKCVFDKNGKALYFSRSAIPH----ILKKDTPIY 179
Query: 223 LHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDV 282
LH+G+ +Y + L Y P+PL EDLEQL+VLE+G + V V+ ++ VD PED+
Sbjct: 180 LHIGVYAYRRSALFSYIASAPSPLSQAEDLEQLRVLEHGGSIHVCVVEAKSPSVDYPEDI 239
Query: 283 EKIESFM 289
K+E ++
Sbjct: 240 NKVEEYL 246
>gi|373461987|ref|ZP_09553720.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Prevotella
maculosa OT 289]
gi|371950164|gb|EHO68022.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Prevotella
maculosa OT 289]
Length = 247
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 109/252 (43%), Positives = 157/252 (62%), Gaps = 15/252 (5%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +G+IPAR+AS+RF GKPL + GKP+IQ +E++ A LD + VATDDE+I
Sbjct: 2 KFIGLIPARYASTRFPGKPLALLNGKPVIQHVYEQA--AKVLDAVYVATDDERIYNKVLA 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG +MTS +GT+R EAL+K+ +D+VVNIQGDEP I I+ + +
Sbjct: 60 FGGKAVMTSTEHHSGTDRIEEALEKVGGDFDVVVNIQGDEPFIAQSQIETLCQCFVDK-- 117
Query: 169 AVFSTAVTSL-KP----EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVN---PQFP 220
+T + +L KP E A +PN K VVDN GYA+YFSR +IP+ + + ++P
Sbjct: 118 ---ATQIATLGKPFECIEAAENPNSPKIVVDNRGYALYFSRSIIPFVRGTERQDWLSKYP 174
Query: 221 YLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPE 280
+L HLGI +Y +N LK L + L+L E LEQL+ L+NGY++KV D E G+D P+
Sbjct: 175 FLKHLGIYAYRTNVLKEITKLPQSSLELAESLEQLRWLQNGYRIKVGLTDVETVGIDTPD 234
Query: 281 DVEKIESFMRER 292
D+++ E F+R R
Sbjct: 235 DLQRAEEFIRNR 246
>gi|260886285|ref|ZP_05897548.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Selenomonas
sputigena ATCC 35185]
gi|330839732|ref|YP_004414312.1| 3-deoxy-D-manno-octulosonatecytidylyltransferase [Selenomonas
sputigena ATCC 35185]
gi|260864004|gb|EEX78504.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Selenomonas
sputigena ATCC 35185]
gi|329747496|gb|AEC00853.1| 3-deoxy-D-manno-octulosonatecytidylyltransferase [Selenomonas
sputigena ATCC 35185]
Length = 244
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 104/250 (41%), Positives = 150/250 (60%), Gaps = 10/250 (4%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
R + +IPAR+AS+R GKPL +I GKPMI R ER+ A + ++VATDDE+I + +
Sbjct: 2 RTLCVIPARYASTRLPGKPLADICGKPMICRVLERASRAQKPEKVIVATDDERIYDAVRA 61
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
G + +MT GT+R E + + D++VN+QGDEPLIEP +ID ++ + D
Sbjct: 62 EGGEALMTRADHPTGTDRLAEVAEAY-PEVDLIVNVQGDEPLIEPSVIDELIAPFEM--D 118
Query: 169 AVFSTAVTSLKPEDA---FDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHL 225
A ++ +DA +PN VK +VD GYA+YFSR L+PY ++ P H+
Sbjct: 119 ENLPMATVMVRMDDAAEQLNPNNVKVIVDKLGYALYFSRSLVPYPRAAA----GPVYKHI 174
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKI 285
GI +Y +FL Y L PTPL+ E LEQL+ LENGY ++V++ D GVD PED+ +
Sbjct: 175 GIYAYRRDFLLRYARLEPTPLERAESLEQLRALENGYGIRVLETDCRFVGVDTPEDLALV 234
Query: 286 ESFMRERNLS 295
RE+ L+
Sbjct: 235 NKIYREQGLA 244
>gi|423136331|ref|ZP_17123974.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Fusobacterium
nucleatum subsp. animalis F0419]
gi|371962008|gb|EHO79622.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Fusobacterium
nucleatum subsp. animalis F0419]
Length = 245
Score = 197 bits (501), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 105/247 (42%), Positives = 154/247 (62%), Gaps = 6/247 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR++S+R EGKPL I G MI+ ++R+K + LD L+VATDDE+I
Sbjct: 2 KFLGIIPARYSSTRLEGKPLKMIEGHTMIEWVYKRAK-KSNLDALIVATDDERIYNEVIN 60
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG IMT+++ NGT R E +K+ +D ++NIQGDEPLIE +I+ +++ + D
Sbjct: 61 FGGQAIMTNKNHTNGTSRIAEVCEKM-TGFDTIINIQGDEPLIEYGMINSLIETFKENKD 119
Query: 169 AVFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+T L E+ +PN VK V D + YAIYFSR +IPY + N Y H+GI
Sbjct: 120 LKMATLKHKLLDKEEIENPNNVKVVCDKNDYAIYFSRSVIPYPRK---NENIEYFKHIGI 176
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
Y +F+ Y + TPL+ E LEQL+VLENGYK+KV++ H GVD E++E++ +
Sbjct: 177 YGYKRDFVIEYSKMSITPLEETESLEQLRVLENGYKIKVLETTHSLIGVDTQENLEQVIT 236
Query: 288 FMRERNL 294
F+ + N+
Sbjct: 237 FIIKNNI 243
>gi|375256251|ref|YP_005015418.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Tannerella
forsythia ATCC 43037]
gi|363408166|gb|AEW21852.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Tannerella
forsythia ATCC 43037]
Length = 252
Score = 197 bits (501), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 102/253 (40%), Positives = 165/253 (65%), Gaps = 13/253 (5%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR+AS+RF GKPL ++ G+PMI+R +E ++ T+D L VATDD +I +
Sbjct: 2 KFLGIIPARYASTRFPGKPLADMDGRPMIRRVYE--QVIETVDRLYVATDDARIEAAVKA 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG +V+MTSE+ R+GT+RC+EA K+ +++D+V+NIQGDEP I P+ I+ +K ++P+
Sbjct: 60 FGGEVVMTSEAHRSGTDRCHEACTKVGEEFDVVINIQGDEPFIRPQQIER-LKECFSSPE 118
Query: 169 AVFSTAVTSLKPE-----DAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVN----PQF 219
+T + + F+PN K V++ +G A+YFSR +IPY + GK++ Q
Sbjct: 119 VQIATLAKAFAKDGDFEATLFNPNTPKVVMNKNGDALYFSRSIIPYIR-GKIHTEWLAQH 177
Query: 220 PYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAP 279
+ H+G+ +Y ++ L L + L+ E LEQL+ LENGY+++V + E G+D P
Sbjct: 178 VFYKHIGLYAYRADVLSKIARLPQSSLEQAESLEQLRWLENGYRIRVGITEQETIGIDTP 237
Query: 280 EDVEKIESFMRER 292
+D+E+ +F+R R
Sbjct: 238 DDMERAIAFLRSR 250
>gi|307566373|ref|ZP_07628812.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Prevotella amnii
CRIS 21A-A]
gi|307344950|gb|EFN90348.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Prevotella amnii
CRIS 21A-A]
Length = 245
Score = 197 bits (501), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 153/244 (62%), Gaps = 5/244 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ VGIIPAR+ASSRF GKPL + GK +I+R + + K A L + VATDDE+I + +
Sbjct: 2 KFVGIIPARYASSRFPGKPLAILGGKMVIERVYMQVKEA--LKDVYVATDDERIYKAVKS 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
F +VIMT+ ++GT+R EA+ K+ +KYD+V+NIQGDEP I+ I V+ +
Sbjct: 60 FHGNVIMTNNKHKSGTDRICEAIDKIGEKYDVVINIQGDEPFIQASQIKTVIDCFDDSQT 119
Query: 169 AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVN---PQFPYLLHL 225
+ + K ED +PN K V+DN+ YA+YFSR IP+ + + FP+L H+
Sbjct: 120 QIATLGKRFDKIEDVQNPNSPKIVLDNNNYAMYFSRSPIPFIRGKETKEWLANFPFLKHI 179
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKI 285
G+ +Y + LK L +PL++ E LEQL+ L+NGYK+KV D E G+D PED++K
Sbjct: 180 GLYAYKTEVLKEISKLQQSPLEIAESLEQLRWLQNGYKIKVGITDIETIGIDTPEDLQKA 239
Query: 286 ESFM 289
E F+
Sbjct: 240 EIFL 243
>gi|387131869|ref|YP_006297842.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Prevotella
intermedia 17]
gi|386374717|gb|AFJ07803.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Prevotella
intermedia 17]
Length = 250
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 104/249 (41%), Positives = 154/249 (61%), Gaps = 7/249 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+V+GIIPAR+ASSRF GKPL + GK +IQR E ++ LD + VATDDE+I
Sbjct: 2 KVIGIIPARYASSRFPGKPLAKLGGKYVIQRVVE--QVGAVLDDVYVATDDERIYNTVTS 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
GA +MT ++GT+R EAL+K+ +D+VVNIQGDEP I+ I+ VV A
Sbjct: 60 MGAKAVMTRSDHQSGTDRIAEALEKIGGNFDVVVNIQGDEPFIQKSQIETVVACFNDADT 119
Query: 169 AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ----FPYLLH 224
+ + E+A +PN K ++DN YA+YF+R L PY + GK Q +P+L H
Sbjct: 120 QIATLGKKFATIEEAKNPNSPKIILDNRSYAMYFTRALAPYIR-GKEESQWLNVYPFLKH 178
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEK 284
+G+ +Y + L+ L +PL++ E LEQL+ L+NGYK+KV + E G+D PED+++
Sbjct: 179 IGLYAYRTGVLREVTKLPQSPLEIAEGLEQLRWLQNGYKIKVGLTEVETVGIDTPEDLQR 238
Query: 285 IESFMRERN 293
E F+ +++
Sbjct: 239 AELFLAQQS 247
>gi|222055365|ref|YP_002537727.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Geobacter daltonii
FRC-32]
gi|254807763|sp|B9M9Q4.1|KDSB_GEOSF RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|221564654|gb|ACM20626.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Geobacter
daltonii FRC-32]
Length = 253
Score = 197 bits (500), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 106/254 (41%), Positives = 150/254 (59%), Gaps = 13/254 (5%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
++ IIPAR+AS+RFEGK L I GKPM+Q +ER+ A+ + ++VATDDE+I +
Sbjct: 2 KITAIIPARYASTRFEGKALAQIQGKPMVQHVYERTLKASLVSEVIVATDDERIVAAVRA 61
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG MTS S GT+R E +L+ DI+VN+QGDEPLI+P +ID + L
Sbjct: 62 FGGRAEMTSRSHETGTDRLAEVAARLDS--DIIVNVQGDEPLIDPAMIDEAISPLAEDSS 119
Query: 169 AVFSTAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNP---------Q 218
+ T T +K D PN VK V D GYA+YFSR +P N K N +
Sbjct: 120 LLMGTLKTRIKSLHDFLSPNVVKVVTDWEGYALYFSRSPLP-NFRDKWNDLKDEAFSSRK 178
Query: 219 FPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDA 278
H+G+ Y FL + + PT L++ E LEQL+VLENGY++KV++ D E+ GVD
Sbjct: 179 LLCFKHVGLYVYRREFLLQFAQMSPTYLEMAEKLEQLRVLENGYRIKVVETDFESIGVDT 238
Query: 279 PEDVEKIESFMRER 292
P D++K+ +++R
Sbjct: 239 PGDLDKVLERLKDR 252
>gi|342218598|ref|ZP_08711208.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Megasphaera sp.
UPII 135-E]
gi|341589468|gb|EGS32743.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Megasphaera sp.
UPII 135-E]
Length = 245
Score = 197 bits (500), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 102/239 (42%), Positives = 146/239 (61%), Gaps = 2/239 (0%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
+ IIPAR+ S+R GKPLV+I GK MIQR +E+ A L + VA D ++ + +FG
Sbjct: 4 ICIIPARYGSTRLPGKPLVDIAGKSMIQRVYEQVVKAAALQTVAVAVDTPQVYDTVIRFG 63
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAV 170
IMT + GT+R EA++ + D+VVN+QGDEPLI PEII+ + + P
Sbjct: 64 GKAIMTRQDHVTGTDRLAEAIRHFPEA-DVVVNVQGDEPLIAPEIINSLCRVFDKYPTIQ 122
Query: 171 FSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSY 230
+T T L+ + DP+ VK V++ A+YFSR LIPY + N PY H+GI +Y
Sbjct: 123 MATVATPLQESEYDDPSAVKVVLNKRDEAMYFSRSLIPYPRQAYGNQCQPY-KHVGIYAY 181
Query: 231 DSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFM 289
FL Y + TP + E LEQL+VLENGY +KVIK +H+ GVD PED+++++++
Sbjct: 182 RYRFLLQYAQMAQTPAEKTESLEQLRVLENGYTIKVIKTNHQFIGVDTPEDLQRVQAYF 240
>gi|402302171|ref|ZP_10821291.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Selenomonas sp.
FOBRC9]
gi|400381158|gb|EJP33962.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Selenomonas sp.
FOBRC9]
Length = 244
Score = 197 bits (500), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 104/244 (42%), Positives = 149/244 (61%), Gaps = 7/244 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+V+ IIPAR+AS+R GKPL +I GKPMI R +ER+ A + +VVATDDE+I +
Sbjct: 2 KVLCIIPARYASTRLPGKPLRDIAGKPMIVRVYERALQARLVQDVVVATDDERIRTVVEA 61
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
G +MT GT+R EA ++ YD+++N+QGDEPLIEP +ID +V+ A
Sbjct: 62 HGGHAVMTRADHATGTDRLAEAAARM-TDYDLIINVQGDEPLIEPSVIDALVEPFLADDR 120
Query: 169 AVFSTAVTSLK-PEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+TA T++ E+ +PN VK + D G A+YFSR IPY + P H+GI
Sbjct: 121 LAMATAKTAITDEEEQENPNNVKVITDKSGNALYFSRARIPYARV----PGAKVYKHIGI 176
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKI-E 286
+Y +FL Y + TPL+L E LEQL+ LENGY+++V++ D GVD ED+ + E
Sbjct: 177 YAYRRDFLLAYARMAQTPLELSESLEQLRALENGYRIRVVETDAVFIGVDTEEDLAAVNE 236
Query: 287 SFMR 290
++ R
Sbjct: 237 AYRR 240
>gi|260881398|ref|ZP_05404303.2| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Mitsuokella
multacida DSM 20544]
gi|260848843|gb|EEX68850.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Mitsuokella
multacida DSM 20544]
Length = 250
Score = 197 bits (500), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 103/243 (42%), Positives = 150/243 (61%), Gaps = 6/243 (2%)
Query: 50 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQF 109
V+ +IPAR+AS+R GKPL +I GKPMI R +ER+ A+ + +VATDD +I + Q
Sbjct: 9 VLCVIPARYASTRLPGKPLKDIAGKPMICRVYERAAKASRVAAAIVATDDSRIYDAVLQH 68
Query: 110 GADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
G + +MT + GT+R E +K D+++N+QGDEPLIEP++ID + A D
Sbjct: 69 GGEAVMTRKDHPTGTDRLAEVAEKY-PDVDLIINVQGDEPLIEPKLIDELAAAFDGDADL 127
Query: 170 VFSTAVTSLKPE-DAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQ 228
+T T + E + +PN VK V+D GYA+YFSR L+PY + +P P H+GI
Sbjct: 128 QMATVCTEITDEAEQQNPNNVKVVMDKQGYALYFSRSLMPYPR----HPGTPVYKHIGIY 183
Query: 229 SYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESF 288
+Y +FL Y + TPL+ E LEQL+ LENGY+++VIK + GVD ED+ K+ +
Sbjct: 184 AYKRDFLLAYAKMAETPLEHAESLEQLRALENGYRIRVIKTPYRFVGVDTAEDLAKVNAI 243
Query: 289 MRE 291
R+
Sbjct: 244 YRQ 246
>gi|406594523|ref|YP_006741756.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Chlamydia
psittaci MN]
gi|410858544|ref|YP_006974484.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia psittaci
01DC12]
gi|405782955|gb|AFS21703.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Chlamydia
psittaci MN]
gi|410811439|emb|CCO02090.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia psittaci
01DC12]
Length = 254
Score = 197 bits (500), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 102/247 (41%), Positives = 152/247 (61%), Gaps = 5/247 (2%)
Query: 44 KNFRSRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIA 103
+ F S+ VG++PAR+ S RF GKPL ILGK +IQRT+E + TLD +VVATDD++I
Sbjct: 4 QTFISKKVGVLPARWGSVRFPGKPLAMILGKSLIQRTYENIIQSETLDKVVVATDDQRIM 63
Query: 104 ECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKAL 163
+ FG + +MTS C NGTER E + + + +I+VNIQGDEP + ++D +V+ L
Sbjct: 64 DHVIDFGGECVMTSPECANGTERMAETVSRYFPEAEIMVNIQGDEPCLRHTVVDALVRKL 123
Query: 164 QAAPDAVFSTAVT-SLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYL 222
+ P+ T V + P + +VKCV D +G A+YFSR IP+ + + P
Sbjct: 124 EENPEIHMVTPVAQTTDPHEILTNQKVKCVFDKNGKALYFSRSAIPH----ILKKETPIY 179
Query: 223 LHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDV 282
LH+G+ +Y + L Y P+PL EDLEQL+VLE+G + V V+ ++ VD PED+
Sbjct: 180 LHIGVYAYRRSALFSYIASAPSPLSQAEDLEQLRVLEHGGSIHVCVVEAKSPSVDYPEDI 239
Query: 283 EKIESFM 289
++E ++
Sbjct: 240 NRVEEYL 246
>gi|29840354|ref|NP_829460.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydophila
caviae GPIC]
gi|33301242|sp|Q822T3.1|KDSB_CHLCV RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|29834703|gb|AAP05338.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Chlamydophila
caviae GPIC]
Length = 254
Score = 196 bits (499), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 99/245 (40%), Positives = 152/245 (62%), Gaps = 5/245 (2%)
Query: 46 FRSRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAEC 105
F S+ VG++PAR+ S+RF GKPL +ILGK +I+RT+E + LD ++VATDD++I +
Sbjct: 6 FASKKVGVLPARWGSARFTGKPLASILGKSLIRRTYENINQSIALDKVIVATDDQRIMDH 65
Query: 106 CQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQA 165
FG D ++TS C NGTER E + + + +I+VNIQGDEP ++ ++D +V+ L+
Sbjct: 66 VLDFGGDCVLTSPECANGTERTAETISRYFPEAEIIVNIQGDEPCLQHTVVDALVRKLEE 125
Query: 166 APDAVFSTAVT-SLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLH 224
P+ T V + + +VKCV D +G A+YFSR IP+ + + P LH
Sbjct: 126 FPEIQIVTPVAKTTDSHEILTNQKVKCVFDKNGKALYFSRSPIPH----ILKKETPIYLH 181
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEK 284
+G+ ++ N L Y PTPL EDLEQL++LE+G + V V+ ++ VD PED+ K
Sbjct: 182 IGVYAFRRNALFNYIESSPTPLSQAEDLEQLRILEHGGSIHVCVVEAKSPSVDYPEDINK 241
Query: 285 IESFM 289
+E ++
Sbjct: 242 VEKYL 246
>gi|257126790|ref|YP_003164904.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Leptotrichia
buccalis C-1013-b]
gi|257050729|gb|ACV39913.1| 3-deoxy-D-manno-octulosonatecytidylyltransferase [Leptotrichia
buccalis C-1013-b]
Length = 248
Score = 196 bits (499), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 104/247 (42%), Positives = 155/247 (62%), Gaps = 4/247 (1%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+++G+IPAR+ASSRFEGKPL I G PMI+ ++R+K A +D LVVATDD++I + ++
Sbjct: 2 KILGVIPARYASSRFEGKPLKEIEGHPMIEWVYKRAKNAD-IDELVVATDDKRIFDAVKK 60
Query: 109 FGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
FG +V+MTSE+ NGT R E + K E K YD ++NIQGDEPLI+ E I+ + +
Sbjct: 61 FGGNVVMTSENHENGTSRIIEVINKDEYKNYDFIINIQGDEPLIDIESINILANNYRNEK 120
Query: 168 DAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+ + +D +PN VK + D + AIYFSR +IPY + K + F Y H+GI
Sbjct: 121 SEIVTLKQEMKLQKDIENPNHVKVITDFNNNAIYFSRSVIPYER--KPDKNFKYFKHIGI 178
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
Y + FL L L+ E LEQL+ +ENGYK+KV++ GVD ED++++
Sbjct: 179 YGYTAKFLNELKNLKEGILEKIESLEQLRFIENGYKIKVLETVSNVIGVDTEEDLKEVIE 238
Query: 288 FMRERNL 294
F++++ +
Sbjct: 239 FVKKKGI 245
>gi|188995614|ref|YP_001929866.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Porphyromonas
gingivalis ATCC 33277]
gi|226724318|sp|B2RLM4.1|KDSB_PORG3 RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|188595294|dbj|BAG34269.1| putative 3-deoxy-D-manno-octulosonate cytidylyltransferase
[Porphyromonas gingivalis ATCC 33277]
Length = 254
Score = 196 bits (499), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 105/256 (41%), Positives = 155/256 (60%), Gaps = 14/256 (5%)
Query: 48 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQ 107
+ V+ IIPARFASSRF GKPL ++LGK MIQR ER +A + VVATDDE+I + +
Sbjct: 3 TEVIAIIPARFASSRFPGKPLADMLGKSMIQRVHER--IAGVVPRAVVATDDERIRQAVE 60
Query: 108 QFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
FG +V+MTS C +GTERC EA K+ + IV+N+QGDEP I+ E ID ++ A P
Sbjct: 61 DFGGEVVMTSPECSSGTERCREAFDKVGRGEKIVLNLQGDEPFIQKEQIDLLISAFD-KP 119
Query: 168 DAVFSTAVTSLKPEDAFD----PNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNP-----Q 218
+ +T + +F+ PN K V+D+ GYA+YFSR +IPY + V P +
Sbjct: 120 ETDIATLAEVFSSDASFERLNNPNSPKIVLDHGGYALYFSRSVIPYLRG--VQPDSWCRR 177
Query: 219 FPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDA 278
Y H+GI ++ L+ L + + E LEQL+ LE GY+++V++ G+D
Sbjct: 178 HTYYKHIGIYAFRPTVLRKITSLPQSTAEQAESLEQLRWLEYGYRIRVLQTQQSTIGIDT 237
Query: 279 PEDVEKIESFMRERNL 294
PED++K +++R + +
Sbjct: 238 PEDMDKAIAYLRSQGM 253
>gi|260914319|ref|ZP_05920788.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pasteurella
dagmatis ATCC 43325]
gi|260631420|gb|EEX49602.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pasteurella
dagmatis ATCC 43325]
Length = 261
Score = 196 bits (499), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 114/261 (43%), Positives = 160/261 (61%), Gaps = 16/261 (6%)
Query: 48 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQ 107
++ IIPAR+AS+R GKPL +I GKPMI +E++KL+ +VVATD+ ++A+ +
Sbjct: 2 TKFTVIIPARYASTRLPGKPLADIAGKPMIAHVFEKAKLSGA-SRVVVATDNAEVAKAAE 60
Query: 108 QFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAA 166
FGA+V MTSE +GTER E ++KL + D I+VNIQGDEPLI P I+ V + L
Sbjct: 61 VFGAEVCMTSEKHNSGTERLAEVVEKLAIQDDEIIVNIQGDEPLIPPVIVQQVAENLVKY 120
Query: 167 PDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSG----KVNPQF--- 219
+ S AV PE+ F+PN VK + D GY +YFSR +IP+N+ + NP
Sbjct: 121 QVKMASLAVKITDPEELFNPNAVKVLTDKDGYVLYFSRAVIPWNRDQFANLQANPALHKT 180
Query: 220 -----PYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEA 273
YL H+GI +Y + F+K Y PT L+ E LEQL+VL NG K+ V + +
Sbjct: 181 LELGDHYLRHIGIYAYRAGFIKQYVQWQPTSLEQIESLEQLRVLWNGEKIHVELAKEVPP 240
Query: 274 HGVDAPEDVEKIESFMRERNL 294
GVD PED+EK+ S + ++NL
Sbjct: 241 VGVDTPEDLEKVRSIL-QKNL 260
>gi|224368928|ref|YP_002603089.1| protein KdsB [Desulfobacterium autotrophicum HRM2]
gi|223691645|gb|ACN14928.1| KdsB [Desulfobacterium autotrophicum HRM2]
Length = 244
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 97/240 (40%), Positives = 151/240 (62%), Gaps = 4/240 (1%)
Query: 50 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQF 109
+ IIP+R+AS RF GKPL + GKPMIQR +E++ A ++D ++VATD+E+I + F
Sbjct: 2 TIAIIPSRYASKRFNGKPLALVAGKPMIQRVYEQAIQAGSIDRVMVATDNEQIFDTVTAF 61
Query: 110 GADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
G + IMT R+GT+R A ++L + D +++NIQGD+P+ PE +D +
Sbjct: 62 GGEAIMTQGDLRSGTDRVWNACRQLPLEPDEVIINIQGDQPIFSPECLDQLTAPFDTDKT 121
Query: 169 AVFST-AVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
ST A+ P D DP+ VK ++ G+A+YFSR IP+ + GK Q P+ HLG
Sbjct: 122 LGMSTLAIEITDPRDLTDPSAVKVTLNQKGFALYFSRSQIPFPRDGKS--QIPFYRHLGF 179
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
+Y +FL+++ L +PL+ E LEQL+VLE GY +KV+ +++ VD P+D+++IE+
Sbjct: 180 YAYRKSFLEMFTKLGKSPLEETEKLEQLRVLEYGYDIKVVITTYDSPSVDTPDDIDRIEA 239
>gi|384449505|ref|YP_005662107.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Chlamydophila
pneumoniae LPCoLN]
gi|269303111|gb|ACZ33211.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Chlamydophila
pneumoniae LPCoLN]
Length = 254
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 102/240 (42%), Positives = 149/240 (62%), Gaps = 5/240 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
+G++PAR+ SSR+ GKPL I GK +IQRT+E + ++ LD +VVATDD++I + FG
Sbjct: 11 IGVLPARWNSSRYPGKPLAKIHGKSLIQRTYENASQSSLLDKIVVATDDQRIIDHVTDFG 70
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAV 170
+MTS +C NGTER E K K +I+VNIQGDEP + E++D +V+ L+++P+A
Sbjct: 71 GYAVMTSPTCSNGTERTGEVATKYFPKTEIIVNIQGDEPCLNSEVVDALVQKLRSSPEAE 130
Query: 171 FSTAVT-SLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQS 229
T V + E+ +VKCV D+ G A+YFSR IP+ + P LH+G+ +
Sbjct: 131 LVTPVALTTDREEILTEKKVKCVFDSEGRALYFSRSPIPF----ILKKATPVYLHIGVYA 186
Query: 230 YDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFM 289
+ L Y TPL EDLEQL+ LE+G K+ V VD ++ VD PED+ K+E ++
Sbjct: 187 FKREALFRYLQHSSTPLSDAEDLEQLRFLEHGGKIHVCIVDAKSPSVDYPEDIAKVEQYI 246
>gi|299140541|ref|ZP_07033679.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Prevotella oris
C735]
gi|298577507|gb|EFI49375.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Prevotella oris
C735]
Length = 247
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 108/253 (42%), Positives = 156/253 (61%), Gaps = 15/253 (5%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +G+IPAR+AS+RF GKPL + GKP+IQ +E++ LD + VATDDE+I +
Sbjct: 2 KFIGLIPARYASTRFPGKPLALLAGKPVIQHVYEQA--VKVLDAVYVATDDERIYNKVTE 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG +MTS +GT+R EAL+K+ +D+VVNIQGDEP I I+ + +
Sbjct: 60 FGGKAVMTSTEHHSGTDRIEEALEKVGGDFDVVVNIQGDEPFIAQSQIETLCHCFEDE-- 117
Query: 169 AVFSTAVTSL-KP----EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVN---PQFP 220
+T + +L KP E +PN K VVDN GYA+YFSR +IP+ +S + ++P
Sbjct: 118 ---ATQIATLGKPFECIEAVENPNSPKIVVDNRGYAMYFSRSVIPFVRSVERQEWLKKYP 174
Query: 221 YLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPE 280
+L HLGI +Y + LK L + L+L E LEQL+ LENGY++KV + E G+D PE
Sbjct: 175 FLKHLGIYAYRTEVLKAITRLPQSSLELAESLEQLRWLENGYRIKVGITNVETVGIDTPE 234
Query: 281 DVEKIESFMRERN 293
D+++ E F+R R
Sbjct: 235 DLQRAEDFIRNRQ 247
>gi|301112198|ref|XP_002905178.1| 3-deoxy-manno-octulosonate cytidylyltransferase, putative
[Phytophthora infestans T30-4]
gi|262095508|gb|EEY53560.1| 3-deoxy-manno-octulosonate cytidylyltransferase, putative
[Phytophthora infestans T30-4]
Length = 255
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 103/246 (41%), Positives = 156/246 (63%), Gaps = 8/246 (3%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +G+IPAR S+RF GKPL GK MI+ T+ ++ + L +VVA+D E++ Q
Sbjct: 2 KALGVIPARLGSTRFPGKPLTEFFGKTMIEHTYAAAEGSKLLSKVVVASDSERVLRVIQG 61
Query: 109 FGADVIMTSESCRNGTERCNEALQKLE----KKYDIVVNIQGDEPLIEPEIIDGVVKALQ 164
G D ++T +C GT+R +AL + +YDIVVNIQGDEP + P ID +KAL+
Sbjct: 62 VGGDTVLTG-ACNTGTDRIVQALHLMGSEELNEYDIVVNIQGDEPGVNPRHIDMCIKALR 120
Query: 165 AA-PDAVFSTAVTSLKPE-DAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF-PY 221
A PD+V ST T + E +A + VKCV D + A+YFSR +IP++K+G +P+ Y
Sbjct: 121 GAGPDSVMSTLATPIFDEREARSQDSVKCVADRNSNALYFSRAMIPHSKTGIFSPETTAY 180
Query: 222 LLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPED 281
L H+G+ ++ +FL +P L P+ L+ EDLEQL+VL GY++K+++VD GVD D
Sbjct: 181 LRHVGMYAFRKDFLLEFPTLPPSDLEESEDLEQLRVLSAGYRIKLVQVDSTLPGVDTRAD 240
Query: 282 VEKIES 287
++ ++S
Sbjct: 241 LDALKS 246
>gi|409199065|ref|ZP_11227728.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Marinilabilia
salmonicolor JCM 21150]
Length = 252
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 105/245 (42%), Positives = 158/245 (64%), Gaps = 11/245 (4%)
Query: 50 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQF 109
++GIIPAR+AS+RF GKPL +I G MIQR + ++ + L +VVATDD++I + + F
Sbjct: 6 ILGIIPARYASTRFPGKPLADIGGTSMIQRVYHQT--SQVLSQVVVATDDQRIFDAVKAF 63
Query: 110 GADVIMTSESCRNGTERCNEALQKLEKK----YDIVVNIQGDEPLIEPEIIDGVVKALQA 165
G V+MTSE+ ++GT+RC EAL LE++ + +VVNIQGDEP I+PE I+ +
Sbjct: 64 GGKVVMTSENHQSGTDRCTEALNNLEQETGRSFKVVVNIQGDEPFIQPEQIEKLTSCFHN 123
Query: 166 APDAVFSTAVTSLK-PEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS---GKVNPQFPY 221
A D +T V LK E+ FDPN+ K V++ + A+YFSR IPY ++ + + + Y
Sbjct: 124 A-DTEIATLVKPLKNNEELFDPNKPKVVLNKNAQALYFSRSPIPYFRNVPEKEWHNRHKY 182
Query: 222 LLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPED 281
L+H+G+ +Y ++ L+ L L+ E LEQL+ LENGY + K + E+ VD PED
Sbjct: 183 LIHIGLYAYRTDVLRDITMLEQGALEKAESLEQLRWLENGYVISTRKTEFESWSVDTPED 242
Query: 282 VEKIE 286
+EK++
Sbjct: 243 IEKLK 247
>gi|294102473|ref|YP_003554331.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Aminobacterium
colombiense DSM 12261]
gi|293617453|gb|ADE57607.1| 3-deoxy-D-manno-octulosonatecytidylyltransferase [Aminobacterium
colombiense DSM 12261]
Length = 244
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 104/243 (42%), Positives = 148/243 (60%), Gaps = 9/243 (3%)
Query: 50 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQF 109
++G+IPAR+ S+R GKPL +I GKP+IQ +E++ +++L L+VATDDE+I + Q F
Sbjct: 3 ILGVIPARYGSTRLPGKPLADICGKPLIQHVYEKAS-SSSLGALIVATDDERIIKAVQAF 61
Query: 110 GADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+ ++TSE NGT R E +K+ Y V+NIQGDEPL++P +ID V+ AL D
Sbjct: 62 NGNAVLTSEKHPNGTSRAAEVAEKMNVDY--VINIQGDEPLLDPRMIDEVIHALTENEDV 119
Query: 170 VFSTAVTSLKPEDAF-DPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQ 228
V +T + + + +PN VK V D +A+YFSR IPY + V P H+GI
Sbjct: 120 VSATLCAPILDKASLSNPNVVKVVKDRRDFALYFSRSPIPYMR---VETALPVYEHIGIY 176
Query: 229 SYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIK--VDHEAHGVDAPEDVEKIE 286
Y +FL Y L TPL E LEQLK+LE+GY MKV++ V H VD PED++ +
Sbjct: 177 GYRKDFLMKYVELEATPLSTAESLEQLKILEHGYSMKVVETAVTHRGPSVDTPEDLDAVR 236
Query: 287 SFM 289
+
Sbjct: 237 RII 239
>gi|337286359|ref|YP_004625832.1| 3-deoxy-D-manno-octulosonatecytidylyltransferase
[Thermodesulfatator indicus DSM 15286]
gi|335359187|gb|AEH44868.1| 3-deoxy-D-manno-octulosonatecytidylyltransferase
[Thermodesulfatator indicus DSM 15286]
Length = 244
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 106/243 (43%), Positives = 151/243 (62%), Gaps = 4/243 (1%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
++ G IPAR+ S+R GKPL I G+PMI +ER++L++ L+ +VVATDDE+I + ++
Sbjct: 2 KIYGFIPARYGSTRLPGKPLALIAGRPMIVHVYERARLSSVLEKVVVATDDERIKKVVEE 61
Query: 109 FGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
+ ++TS+ GTER EA + L DIVVNIQ D+PL+EP +I+ +VK L
Sbjct: 62 IEGEALLTSKEHTCGTERIAEAAEILRLAPDDIVVNIQADQPLLEPAVIEELVKPLLLNA 121
Query: 168 DAVFST-AVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLG 226
D +T AV + ED DPNRVK V++ G AIYFSR LIP+ + +P YL H+G
Sbjct: 122 DLPMATVAVPIEREEDKHDPNRVKVVLNKEGQAIYFSRSLIPFYRPPGPSPT--YLRHIG 179
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIE 286
+ +Y FL + L P L+ E LEQL+ LE+GY + V +E VD PED++KIE
Sbjct: 180 LYAYRKEFLDTFVRLSPGELEQAEKLEQLRALEHGYPIAVSVTKYECPEVDTPEDLKKIE 239
Query: 287 SFM 289
+
Sbjct: 240 ELL 242
>gi|300727993|ref|ZP_07061371.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Prevotella
bryantii B14]
gi|299774835|gb|EFI71449.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Prevotella
bryantii B14]
Length = 247
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 102/246 (41%), Positives = 157/246 (63%), Gaps = 7/246 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR+ASSRF GKPL + GKP+IQR +E+ + LD++ VATDD++I +C +
Sbjct: 2 KFIGIIPARYASSRFPGKPLAILGGKPVIQRVYEQ--VNKLLDNVYVATDDQRIYDCVKN 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG V+MT + ++GT+R EA++K+ +D+VVNIQGDEP I+ E I + + + P+
Sbjct: 60 FGGKVVMTKNNHKSGTDRIEEAIEKIGGDWDVVVNIQGDEPFIQKEQILSLCECFK-DPN 118
Query: 169 AVFSTAVTSLKPEDAF-DPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNP---QFPYLLH 224
+T DA +PN K V+DN +A+YFSR +IPY + + N + Y+ H
Sbjct: 119 TQIATLGKPFTTMDAVTNPNSPKIVLDNQNFAMYFSRSIIPYIRGKQTNEWINSYNYIKH 178
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEK 284
LGI +Y + L+ L + L++ E LEQL+ L+NGYK+KV + E G+D P+D+ +
Sbjct: 179 LGIYAYRKDILQEITKLPQSSLEIAESLEQLRWLQNGYKIKVGITEIETVGIDTPDDLVR 238
Query: 285 IESFMR 290
E F++
Sbjct: 239 AEEFLK 244
>gi|34541435|ref|NP_905914.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Porphyromonas
gingivalis W83]
gi|334145885|ref|YP_004508812.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Porphyromonas
gingivalis TDC60]
gi|419970547|ref|ZP_14486033.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Porphyromonas
gingivalis W50]
gi|81572022|sp|Q7MTW6.1|KDSB_PORGI RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|34397752|gb|AAQ66813.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Porphyromonas
gingivalis W83]
gi|333803039|dbj|BAK24246.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Porphyromonas
gingivalis TDC60]
gi|392610493|gb|EIW93271.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Porphyromonas
gingivalis W50]
Length = 254
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 105/256 (41%), Positives = 154/256 (60%), Gaps = 14/256 (5%)
Query: 48 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQ 107
+ V+ IIPARFASSRF GKPL ++LGK MIQR ER + + VVATDDE+I + +
Sbjct: 3 TEVIAIIPARFASSRFPGKPLADMLGKSMIQRVHER--IVGVVPRAVVATDDERIRQAVE 60
Query: 108 QFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
FG +V+MTS C +GTERC EA K+ + IV+N+QGDEP I+ E ID ++ A P
Sbjct: 61 DFGGEVVMTSPECSSGTERCREAFDKVGRGEKIVLNLQGDEPFIQKEQIDLLISAFD-KP 119
Query: 168 DAVFSTAVTSLKPEDAFD----PNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNP-----Q 218
+ +T + +F+ PN K V+D+ GYA+YFSR +IPY + V P +
Sbjct: 120 ETDIATLAEVFSSDVSFERLNNPNSPKIVLDHGGYALYFSRSVIPYLRG--VQPDSWCRR 177
Query: 219 FPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDA 278
Y H+GI ++ L+ L + + E LEQL+ LE GY+++V++ G+D
Sbjct: 178 HTYYKHIGIYAFRPTVLRKITSLPQSTAEQAESLEQLRWLEYGYRIRVLQTQQSTIGIDT 237
Query: 279 PEDVEKIESFMRERNL 294
PED+EK +++R + +
Sbjct: 238 PEDMEKAIAYLRSQGM 253
>gi|409405822|ref|ZP_11254284.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Herbaspirillum
sp. GW103]
gi|386434371|gb|EIJ47196.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Herbaspirillum
sp. GW103]
Length = 426
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 98/243 (40%), Positives = 147/243 (60%), Gaps = 8/243 (3%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
R + +IPARF SSR GKPL +ILGKPMIQ +ER K L +VVATDDE+I
Sbjct: 2 RCIAVIPARFGSSRLPGKPLADILGKPMIQHVYERVKSIDELADVVVATDDERIVAAVSS 61
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG ++TS +GT+R E +Q D+ +N+QGDEPL+ P + +++A+ AP
Sbjct: 62 FGGKALLTSPDHPSGTDRLREVMQ--HHPADLYLNVQGDEPLVNPAHLRSLLQAMLTAPQ 119
Query: 169 AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK--SGKVNPQFPYLLHLG 226
T + +A +PN VK V + G A+YFSR IP+ + +G+ Y H+G
Sbjct: 120 VQAGTLCHPISASEAENPNTVKVVRNRAGDALYFSRARIPFERESTGRTR----YFKHIG 175
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIE 286
+ +Y + L +PGL P+ L+ E LEQL++++ G++++VI+VDH A GVD P +E++
Sbjct: 176 VYAYRAELLAAFPGLPPSELEGAEMLEQLRIMDAGWQIRVIEVDHAAPGVDTPACLERVR 235
Query: 287 SFM 289
+ M
Sbjct: 236 ALM 238
>gi|304382710|ref|ZP_07365202.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Prevotella
marshii DSM 16973]
gi|304336161|gb|EFM02405.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Prevotella
marshii DSM 16973]
Length = 251
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 105/249 (42%), Positives = 156/249 (62%), Gaps = 8/249 (3%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ + IIPAR+ASSRF GKPL + GKP+IQR +E+ K + L+++ VATDDE+I + +
Sbjct: 2 KFLCIIPARYASSRFPGKPLALLGGKPVIQRVYEQVK--SVLENVYVATDDERIYQAVED 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG +MT+ +GT+R EA K+E +YD+++N+QGDEP + P I + + APD
Sbjct: 60 FGGKAVMTAADHLSGTDRIQEAATKIEGEYDVIINVQGDEPFVHPSQIHEICRCFD-APD 118
Query: 169 AVFSTAVTSL-KPEDAFD-PNRVKCVVDNHGYAIYFSRGLIPYNKSG---KVNPQFPYLL 223
+T K A + PN K VVDN GYA+YFSR +IP+ + + +P+L
Sbjct: 119 TQIATLGKPFGKNMWAIENPNSPKLVVDNAGYAMYFSRSVIPFLRGKEWIEWAENYPFLK 178
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVE 283
H+G+ +Y LK L + L+L E LEQL+ L+NGYK+KV + E G+D PED+E
Sbjct: 179 HIGLYAYRKEVLKAITQLPQSSLELAESLEQLRWLQNGYKIKVGITNAETVGIDTPEDLE 238
Query: 284 KIESFMRER 292
+ E F++E+
Sbjct: 239 RAEQFLQEK 247
>gi|323140927|ref|ZP_08075840.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase
[Phascolarctobacterium succinatutens YIT 12067]
gi|322414665|gb|EFY05471.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase
[Phascolarctobacterium succinatutens YIT 12067]
Length = 244
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 103/246 (41%), Positives = 148/246 (60%), Gaps = 5/246 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+V+ +IPAR+AS+R GKPL I GKPMIQ +ER+ A D +VVATD+E + +
Sbjct: 2 KVLCVIPARYASTRLPGKPLSLIAGKPMIQHVYERACQAKLPDEVVVATDNELVKKAVDG 61
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG +MTS +GT+R E D++VN+QGDEP+I PE+ID + + +
Sbjct: 62 FGGKAMMTSPDHPSGTDRLAEVALNY-PDVDVIVNVQGDEPMIPPEVIDRLAECFTGDSE 120
Query: 169 AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ-FPYLLHLGI 227
+T ++ ED +P VK V D +GYA+YFSR L+PY ++ P+ + H+GI
Sbjct: 121 LQMATLKVAMNEEDYNNPAAVKVVTDLNGYALYFSRSLMPYPRN---KPEGYKVYKHVGI 177
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
+Y +FL Y L PTPL+ E LEQL+ LENGYK+KV++ D + GVD PED+ +
Sbjct: 178 YAYRRSFLLKYAALQPTPLERAESLEQLRALENGYKIKVLESDFQGIGVDTPEDLAAVNE 237
Query: 288 FMRERN 293
+ N
Sbjct: 238 LFAKMN 243
>gi|15618159|ref|NP_224444.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydophila
pneumoniae CWL029]
gi|15835770|ref|NP_300294.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydophila
pneumoniae J138]
gi|16752803|ref|NP_445071.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydophila
pneumoniae AR39]
gi|33241576|ref|NP_876517.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydophila
pneumoniae TW-183]
gi|7387819|sp|Q9Z8U9.1|KDSB_CHLPN RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|4376509|gb|AAD18388.1| deoxyoctulonosic Acid Synthetase [Chlamydophila pneumoniae CWL029]
gi|7189441|gb|AAF38351.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydophila
pneumoniae AR39]
gi|8978608|dbj|BAA98445.1| deoxyoctulonosic acid synthetase [Chlamydophila pneumoniae J138]
gi|33236084|gb|AAP98174.1| CMP-2-keto-3-deoxyoctulosonic acid synthetase [Chlamydophila
pneumoniae TW-183]
Length = 254
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 102/240 (42%), Positives = 149/240 (62%), Gaps = 5/240 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
+G++PAR+ SSR+ GKPL I GK +IQRT+E + ++ LD +VVATDD+ I + FG
Sbjct: 11 IGVLPARWNSSRYPGKPLAKIHGKSLIQRTYENASQSSLLDKIVVATDDQHIIDHVTDFG 70
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAV 170
+MTS +C NGTER E +K K +I+VNIQGDEP + E++D +V+ L+++P+A
Sbjct: 71 GYAVMTSPTCSNGTERTGEVARKYFPKAEIIVNIQGDEPCLNSEVVDALVQKLRSSPEAE 130
Query: 171 FSTAVT-SLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQS 229
T V + E+ +VKCV D+ G A+YFSR IP+ + P LH+G+ +
Sbjct: 131 LVTPVALTTDREEILTEKKVKCVFDSEGRALYFSRSPIPF----ILKKATPVYLHIGVYA 186
Query: 230 YDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFM 289
+ L Y TPL EDLEQL+ LE+G K+ V VD ++ VD PED+ K+E ++
Sbjct: 187 FKREALFRYLQHSSTPLSDAEDLEQLRFLEHGGKIHVCIVDAKSPSVDYPEDIAKVEQYI 246
>gi|260912181|ref|ZP_05918735.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Prevotella sp.
oral taxon 472 str. F0295]
gi|260633708|gb|EEX51844.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Prevotella sp.
oral taxon 472 str. F0295]
Length = 250
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 101/247 (40%), Positives = 150/247 (60%), Gaps = 9/247 (3%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR+ SSRF GKPL + GKP+IQR +E ++A LD VATDDE+I
Sbjct: 2 KFIGIIPARYGSSRFPGKPLALLGGKPVIQRVYE--QVAQALDETYVATDDERIYNKVLA 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG +MTS ++GT+R NEA+QK+ YD+VVNIQGDEP ++ ID + +
Sbjct: 60 FGGKAVMTSSDHQSGTDRVNEAVQKIGGDYDVVVNIQGDEPFVQRLQIDAICQCFDTEGV 119
Query: 169 AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ-----FPYLL 223
+ + + ++ +PN K VV+N G+A+YFSR +IP+ + P+ +P+L
Sbjct: 120 QIATLGIPFKTIDEVRNPNSPKIVVNNAGFAMYFSRSVIPFVRG--TEPEQWLGAYPFLK 177
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVE 283
HLGI +Y L+ L + L+ E LEQL+ L+NGY++KV E G+D PED++
Sbjct: 178 HLGIYAYRPEALRAITALQQSSLEKAESLEQLRWLQNGYQVKVGLTQVETVGIDTPEDLQ 237
Query: 284 KIESFMR 290
+ E F++
Sbjct: 238 RAEEFLK 244
>gi|404496135|ref|YP_006720241.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Geobacter
metallireducens GS-15]
gi|418065442|ref|ZP_12702815.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Geobacter
metallireducens RCH3]
gi|123572190|sp|Q39W63.1|KDSB_GEOMG RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|78193744|gb|ABB31511.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Geobacter
metallireducens GS-15]
gi|373562182|gb|EHP88399.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Geobacter
metallireducens RCH3]
Length = 254
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 101/246 (41%), Positives = 146/246 (59%), Gaps = 11/246 (4%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
++ IIPAR+AS+RF GK L I+GKPM+Q +ER+ A + ++VATDDE++AE +
Sbjct: 2 KITAIIPARYASTRFPGKALAEIIGKPMVQHVYERTAKAGLVSEVIVATDDERVAEAVRA 61
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG V MTS + GT+R E +++ DI+VN+QGDEPLIEP +ID + L A
Sbjct: 62 FGGRVEMTSATHETGTDRLAEVAARIDA--DIIVNVQGDEPLIEPAMIDEAIAPLVADAS 119
Query: 169 AVFSTAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIP--------YNKSGKVNPQF 219
T + +K D PN VK V D G A+YFSR +P V +
Sbjct: 120 IRMGTLKSRIKSLHDFLSPNVVKVVTDREGDALYFSRSPLPNFRDKWNDLKDEAFVTGRL 179
Query: 220 PYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAP 279
H+G+ Y +FL + + PTPL+L E LEQL+VLENG++++V++ E+ GVD P
Sbjct: 180 LCYKHVGLYVYRRDFLLAFARMAPTPLELAEKLEQLRVLENGFRIRVVETSFESIGVDTP 239
Query: 280 EDVEKI 285
D++K+
Sbjct: 240 SDLDKV 245
>gi|398340113|ref|ZP_10524816.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Leptospira
kirschneri serovar Bim str. 1051]
gi|418677329|ref|ZP_13238605.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
kirschneri serovar Grippotyphosa str. RM52]
gi|418685355|ref|ZP_13246531.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
kirschneri serovar Grippotyphosa str. Moskva]
gi|418741556|ref|ZP_13297930.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
kirschneri serovar Valbuzzi str. 200702274]
gi|421131873|ref|ZP_15592050.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
kirschneri str. 2008720114]
gi|400322277|gb|EJO70135.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
kirschneri serovar Grippotyphosa str. RM52]
gi|410356809|gb|EKP04115.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
kirschneri str. 2008720114]
gi|410739963|gb|EKQ84685.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
kirschneri serovar Grippotyphosa str. Moskva]
gi|410751004|gb|EKR07983.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
kirschneri serovar Valbuzzi str. 200702274]
Length = 247
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 110/249 (44%), Positives = 148/249 (59%), Gaps = 7/249 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+++G+IPAR+ASSRF GKPL I K MI+ T+ + ++TL LVVATDD +I E Q+
Sbjct: 3 KILGVIPARYASSRFPGKPLAKIGDKTMIEWTYRNASRSSTLSELVVATDDIRICEVVQK 62
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG +MTS +GT+R E + +Y +++NIQGDEP IEPE+IDGV + P+
Sbjct: 63 FGGRCVMTSPDHASGTDRIIEVANQF-SEYSVIINIQGDEPGIEPELIDGVASLKASHPE 121
Query: 169 AVFST-AVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
ST AV L+ A DPNRVK ++D +G AIYFSR LIP + P HLGI
Sbjct: 122 WAMSTAAVPLLEFSHAADPNRVKVIIDRNGKAIYFSRSLIP----SQFKTTVPLYRHLGI 177
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVE-KIE 286
YD +FL Y L + L+ E LEQL+ +E GY + V VD P D+E IE
Sbjct: 178 YGYDRDFLLQYNSLPKSNLEESESLEQLRAIEAGYGIGVYLSKEAGLSVDTPVDLEIVIE 237
Query: 287 SFMRERNLS 295
F + + +S
Sbjct: 238 DFKKRKWIS 246
>gi|357042436|ref|ZP_09104141.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Prevotella
histicola F0411]
gi|355369388|gb|EHG16783.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Prevotella
histicola F0411]
Length = 248
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 105/248 (42%), Positives = 156/248 (62%), Gaps = 9/248 (3%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR+ASSRF GKPL + G+ +I+R ++ ++++ L + VATDDE+I+ Q
Sbjct: 2 KFIGIIPARYASSRFPGKPLAMLGGETVIERVYK--QVSSILTDVYVATDDERISNTVQS 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG +MT ++GT+R EAL K+ YD+V+NIQGDEP I+ I V+ P
Sbjct: 60 FGGKAVMTRSDHKSGTDRICEALDKIGIFYDVVINIQGDEPFIQKSQIKTVMNCFD-DPQ 118
Query: 169 AVFSTAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIP----YNKSGKVNPQFPYLL 223
+T K E A +PN K V+DN+ YA+YFSR +IP Y KS + ++P+L
Sbjct: 119 TQIATLGKHFKSMESAKNPNSPKIVLDNNSYALYFSRSIIPFVRGYEKSEWIE-RYPFLK 177
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVE 283
H+G+ +Y ++ L+ L + L+L E LEQL+ L+NGY++KV D E G+D PED+E
Sbjct: 178 HIGLYAYRTDVLRAISRLPQSSLELAESLEQLRWLQNGYRIKVGLTDVETIGIDTPEDLE 237
Query: 284 KIESFMRE 291
+ E F+RE
Sbjct: 238 RAEIFLRE 245
>gi|401564710|ref|ZP_10805581.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Selenomonas sp.
FOBRC6]
gi|400188533|gb|EJO22691.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Selenomonas sp.
FOBRC6]
Length = 244
Score = 194 bits (493), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 103/247 (41%), Positives = 149/247 (60%), Gaps = 6/247 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+V+ IIPAR+AS+R GKPL +I GKPMI R +ER+ A + +VVATDDE+I ++
Sbjct: 2 KVLCIIPARYASTRLPGKPLRDIAGKPMIVRVYERAVRARLVQDVVVATDDERILVAVEK 61
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
G +MT GT+R E +K+ YD+++N+QGDEPLI+P +ID +V+ A
Sbjct: 62 HGGRAVMTRADHVTGTDRLAEVAEKM-TDYDLIINVQGDEPLIDPAVIDALVEPFLADGS 120
Query: 169 AVFSTAVTSLKPEDAF-DPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+TA T L E+ +PN VK + D G A+YFSR IPY + NP H+GI
Sbjct: 121 LPMATAKTLLTDEEEMANPNNVKVITDQRGNALYFSRARIPYAR----NPGAQVYKHIGI 176
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
+Y +FL Y + TPL+L E LEQL+ LENG+ ++VI+ D GVD ED+ +
Sbjct: 177 YAYRRDFLLAYARMAQTPLELSESLEQLRALENGHTIRVIETDAVFIGVDTEEDLAAVNE 236
Query: 288 FMRERNL 294
+++ +
Sbjct: 237 VYQKQGI 243
>gi|415763858|ref|ZP_11482195.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Aggregatibacter
actinomycetemcomitans D17P-3]
gi|416033887|ref|ZP_11573167.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Aggregatibacter
actinomycetemcomitans serotype a str. H5P1]
gi|416049695|ref|ZP_11576705.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Aggregatibacter
actinomycetemcomitans serotype d str. I63B]
gi|416069823|ref|ZP_11583419.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Aggregatibacter
actinomycetemcomitans serotype f str. D18P1]
gi|429732803|ref|ZP_19267384.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Aggregatibacter
actinomycetemcomitans Y4]
gi|444332141|ref|ZP_21148997.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Aggregatibacter
actinomycetemcomitans serotype a str. A160]
gi|347991304|gb|EGY32788.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Aggregatibacter
actinomycetemcomitans serotype d str. I63B]
gi|347998757|gb|EGY39666.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Aggregatibacter
actinomycetemcomitans serotype a str. H5P1]
gi|347999576|gb|EGY40397.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Aggregatibacter
actinomycetemcomitans serotype f str. D18P1]
gi|348654439|gb|EGY70062.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Aggregatibacter
actinomycetemcomitans D17P-3]
gi|429155345|gb|EKX98027.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Aggregatibacter
actinomycetemcomitans Y4]
gi|443552212|gb|ELT59702.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Aggregatibacter
actinomycetemcomitans serotype a str. A160]
Length = 257
Score = 194 bits (493), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 110/250 (44%), Positives = 156/250 (62%), Gaps = 11/250 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIP R+ASSR GKPL +I GKPMIQ +E++K + D +++ATD+E +A + FGA+
Sbjct: 7 IIPTRYASSRLPGKPLADIAGKPMIQHVFEQAK-QSGADRVIIATDNELVATAARNFGAE 65
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MT+ES +GTER E ++KL D I+VNIQGDEPLI P I+ V + L P +
Sbjct: 66 VCMTAESHHSGTERLAEVVEKLVLPDDEIIVNIQGDEPLIPPVIVKQVAENLAKYPVNMA 125
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK--------SGKVNPQFPYLL 223
S AV E+ F+PN VK + D +GY +YFSR +IP+++ + K+ YL
Sbjct: 126 SLAVKIDDAEELFNPNVVKVLTDKNGYVLYFSRAVIPWDRDQFAQIDDAAKLRLNTEYLR 185
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDV 282
H+GI +Y + F+K Y PT L+ E LEQL+VL +G K+ V + + A GVD ED+
Sbjct: 186 HIGIYAYRARFIKQYVQWQPTALEHIEKLEQLRVLWHGEKIHVELAKEVPAVGVDTAEDL 245
Query: 283 EKIESFMRER 292
EK+ S + E+
Sbjct: 246 EKVRSILSEK 255
>gi|334128975|ref|ZP_08502850.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Centipeda
periodontii DSM 2778]
gi|333385709|gb|EGK56936.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Centipeda
periodontii DSM 2778]
Length = 244
Score = 194 bits (493), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 106/249 (42%), Positives = 150/249 (60%), Gaps = 10/249 (4%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+V+ IIPAR+AS+R GKPL I GKPMI R +ER+ A + +VVATDDE+I ++
Sbjct: 2 KVLCIIPARYASTRLPGKPLREIAGKPMIVRVYERAVKARLVQDVVVATDDERIRAAVEE 61
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
+G +MT GT+R E +K+ YD+++N+QGDEPLI+P +ID +V+ A
Sbjct: 62 YGGRAVMTRADHATGTDRLAEVAEKM-TDYDLIINVQGDEPLIDPAVIDALVEPFLADAT 120
Query: 169 AVFSTAVTSLKPE-DAFDPNRVKCVVDNHGYAIYFSRGLIPY--NKSGKVNPQFPYLLHL 225
+TA T L E + +PN VK + D G A+YFSR IPY N KV H+
Sbjct: 121 LPMATAKTLLTDEVEMANPNNVKVITDLTGDALYFSRACIPYARNTGAKVYK------HI 174
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKI 285
GI +Y +FL Y + TPL+L E LEQL+ LENG++++VI+ D GVD ED+ +
Sbjct: 175 GIYAYRRDFLLDYARMAQTPLELSESLEQLRALENGHRIRVIETDAVFIGVDTEEDLAAV 234
Query: 286 ESFMRERNL 294
R+R +
Sbjct: 235 NEEYRKRGI 243
>gi|281423214|ref|ZP_06254127.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Prevotella oris
F0302]
gi|281402550|gb|EFB33381.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Prevotella oris
F0302]
Length = 247
Score = 194 bits (493), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 107/253 (42%), Positives = 155/253 (61%), Gaps = 15/253 (5%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +G+IPAR+AS+RF GKPL + GKP+IQ +E++ LD + VATDDE+I +
Sbjct: 2 KFIGLIPARYASTRFPGKPLALLAGKPVIQHVYEQA--VKVLDAVYVATDDERIYNKVTE 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG +MTS +GT+R EAL+K+ +D+VVNIQGDEP I I+ + +
Sbjct: 60 FGGKAVMTSTEHHSGTDRIEEALEKVGGDFDVVVNIQGDEPFIAQSQIETLCHCFEDE-- 117
Query: 169 AVFSTAVTSL-KP----EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVN---PQFP 220
+T + +L KP E +PN K VVDN GYA+YFSR +IP+ + + ++P
Sbjct: 118 ---ATQIATLGKPFECIEAVENPNSPKIVVDNRGYAMYFSRSVIPFVRGVERQEWLKKYP 174
Query: 221 YLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPE 280
+L HLGI +Y + LK L + L+L E LEQL+ LENGY++KV + E G+D PE
Sbjct: 175 FLKHLGIYAYRTEVLKAITRLPQSSLELAESLEQLRWLENGYRIKVGITNVETVGIDTPE 234
Query: 281 DVEKIESFMRERN 293
D+++ E F+R R
Sbjct: 235 DLQRAEDFIRNRQ 247
>gi|421105483|ref|ZP_15566064.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
kirschneri str. H2]
gi|410009387|gb|EKO63042.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
kirschneri str. H2]
Length = 248
Score = 194 bits (493), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 111/249 (44%), Positives = 147/249 (59%), Gaps = 7/249 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+++G+IPAR+ SSRF GKPL I K MI+ T+ + ++TL LVVATDD +I E Q+
Sbjct: 4 KILGVIPARYTSSRFPGKPLAKIGDKTMIEWTYRNASRSSTLSELVVATDDIRICEVVQK 63
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG +MTS +GT+R E + +Y I+VNIQGDEP IEPE+IDGV + P+
Sbjct: 64 FGGRCVMTSPDHASGTDRIIEVANQF-SEYSIIVNIQGDEPGIEPELIDGVASLKASHPE 122
Query: 169 AVFST-AVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
ST AV L+ A DPNRVK ++D +G AIYFSR LIP + P HLGI
Sbjct: 123 WAMSTAAVPLLEFSHATDPNRVKVIIDRNGKAIYFSRSLIP----SQFKTTVPLYRHLGI 178
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVE-KIE 286
YD +FL Y L + L+ E LEQL+ +E GY + V VD P D+E IE
Sbjct: 179 YGYDRDFLLQYNSLPKSNLEESESLEQLRAIEAGYGIGVYLSKEAGLSVDTPVDLEIVIE 238
Query: 287 SFMRERNLS 295
F + + +S
Sbjct: 239 DFKKRKWIS 247
>gi|398335744|ref|ZP_10520449.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Leptospira kmetyi
serovar Malaysia str. Bejo-Iso9]
Length = 246
Score = 194 bits (493), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 109/249 (43%), Positives = 147/249 (59%), Gaps = 7/249 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+++G+IPAR+ASSRF GKPL I K MI+ T+ + +TTL LVVATDDE+I + +
Sbjct: 3 KILGVIPARYASSRFPGKPLAKIGDKTMIEWTYRNASRSTTLSELVVATDDERIHDVVLK 62
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG +MTS +GT+R E +K + ++VNIQGDEP IEPE++DGV + P+
Sbjct: 63 FGGKSVMTSADHPSGTDRIIEVAEKF-PDFSVIVNIQGDEPGIEPELVDGVASLKASHPE 121
Query: 169 AVFST-AVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
ST AV L+ DPNRVK ++D +G AIYFSR LIP V P HLGI
Sbjct: 122 WTMSTAAVPILESSHGTDPNRVKVIMDQNGKAIYFSRSLIPSQFKATV----PLYRHLGI 177
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVE-KIE 286
YD +FL Y L + L+ E LEQL+ +E GY + V VD P D+E IE
Sbjct: 178 YGYDRDFLLKYNSLPKSALEESESLEQLRAIEAGYGIGVYLAKEAGLSVDTPGDLEIVIE 237
Query: 287 SFMRERNLS 295
F + + ++
Sbjct: 238 DFKKRKWIT 246
>gi|421091408|ref|ZP_15552179.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
kirschneri str. 200802841]
gi|409999736|gb|EKO50421.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
kirschneri str. 200802841]
Length = 248
Score = 194 bits (493), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 109/249 (43%), Positives = 148/249 (59%), Gaps = 7/249 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+++G+IPAR+ASSRF GKPL I K MI+ T+ + ++TL LVVATDD +I E Q+
Sbjct: 4 KILGVIPARYASSRFPGKPLAKIGDKTMIEWTYRNASRSSTLSELVVATDDIRICEVVQK 63
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG +MTS +GT+R E + +Y +++NIQGDEP IEPE+IDGV + P+
Sbjct: 64 FGGRCVMTSPDHASGTDRIIEVANQF-SEYSVIINIQGDEPGIEPELIDGVASLKASHPE 122
Query: 169 AVFST-AVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
ST AV L+ A DPNRVK ++D +G AIYFSR LIP + P HLGI
Sbjct: 123 WAMSTAAVPLLEFSHAADPNRVKVIIDRNGKAIYFSRSLIP----SQFKTTVPLYRHLGI 178
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVE-KIE 286
YD +FL Y L + L+ E LEQL+ +E GY + + VD P D+E IE
Sbjct: 179 YGYDRDFLLQYNSLPKSNLEESESLEQLRAIEAGYGIGIYLSKEAGLSVDTPVDLEIVIE 238
Query: 287 SFMRERNLS 295
F + + +S
Sbjct: 239 DFKKRKWIS 247
>gi|418697730|ref|ZP_13258716.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
kirschneri str. H1]
gi|409954339|gb|EKO13294.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
kirschneri str. H1]
Length = 247
Score = 194 bits (493), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 111/249 (44%), Positives = 147/249 (59%), Gaps = 7/249 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+++G+IPAR+ SSRF GKPL I K MI+ T+ + ++TL LVVATDD +I E Q+
Sbjct: 3 KILGVIPARYTSSRFPGKPLAKIGDKTMIEWTYRNASRSSTLSELVVATDDIRICEVVQK 62
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG +MTS +GT+R E + +Y I+VNIQGDEP IEPE+IDGV + P+
Sbjct: 63 FGGRCVMTSPDHASGTDRIIEVANQF-SEYSIIVNIQGDEPGIEPELIDGVASLKASHPE 121
Query: 169 AVFST-AVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
ST AV L+ A DPNRVK ++D +G AIYFSR LIP + P HLGI
Sbjct: 122 WAMSTAAVPLLEFSHATDPNRVKVIIDRNGKAIYFSRSLIP----SQFKTTVPLYRHLGI 177
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVE-KIE 286
YD +FL Y L + L+ E LEQL+ +E GY + V VD P D+E IE
Sbjct: 178 YGYDRDFLLQYNSLPKSNLEESESLEQLRAIEAGYGIGVYLSKEAGLSVDTPVDLEIVIE 237
Query: 287 SFMRERNLS 295
F + + +S
Sbjct: 238 DFKKRKWIS 246
>gi|416074930|ref|ZP_11584778.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Aggregatibacter
actinomycetemcomitans serotype b str. SCC1398]
gi|444344110|ref|ZP_21152425.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Aggregatibacter
actinomycetemcomitans serotype b str. SCC4092]
gi|348006545|gb|EGY46954.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Aggregatibacter
actinomycetemcomitans serotype b str. SCC1398]
gi|443544748|gb|ELT54681.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Aggregatibacter
actinomycetemcomitans serotype b str. SCC4092]
Length = 257
Score = 194 bits (492), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 109/250 (43%), Positives = 158/250 (63%), Gaps = 11/250 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR+ASSR GKPL +I GKPMIQ +E++K + D +++ATD+E +A + FGA+
Sbjct: 7 IIPARYASSRLLGKPLADIAGKPMIQHVFEQAK-QSGADRVIIATDNELVATAARNFGAE 65
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MT+++ +GTER E ++KL D I+VNIQGDEPLI P I+ V + L P +
Sbjct: 66 VCMTAKNHNSGTERLAEVVEKLVLPDDEIIVNIQGDEPLIPPVIVKQVAENLAKYPVNMA 125
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK--------SGKVNPQFPYLL 223
S AV ++ F+PN VK + D +GY +YFSR +IP+++ + K+ YL
Sbjct: 126 SLAVKIDDAKELFNPNVVKVLTDKNGYVLYFSRAVIPWDRDQFAQTDDTAKLRLNTEYLR 185
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDV 282
H+GI +Y + F+K Y PT L+ E LEQL+VL +G K+ V + + A GVD PED+
Sbjct: 186 HIGIYAYRAGFIKQYVQWQPTALEHIEKLEQLRVLWHGEKIHVELAKEVPAVGVDTPEDL 245
Query: 283 EKIESFMRER 292
EK+ S + E+
Sbjct: 246 EKVRSILSEK 255
>gi|365967689|ref|YP_004949251.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Aggregatibacter
actinomycetemcomitans ANH9381]
gi|416084673|ref|ZP_11587057.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Aggregatibacter
actinomycetemcomitans serotype b str. I23C]
gi|444348156|ref|ZP_21155881.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Aggregatibacter
actinomycetemcomitans serotype b str. S23A]
gi|348010331|gb|EGY50385.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Aggregatibacter
actinomycetemcomitans serotype b str. I23C]
gi|365746602|gb|AEW77507.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Aggregatibacter
actinomycetemcomitans ANH9381]
gi|443547622|gb|ELT57083.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Aggregatibacter
actinomycetemcomitans serotype b str. S23A]
Length = 257
Score = 194 bits (492), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 109/250 (43%), Positives = 158/250 (63%), Gaps = 11/250 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR+ASSR GKPL +I GKPMIQ +E++K + D +++ATD+E +A + FGA+
Sbjct: 7 IIPARYASSRLPGKPLADIAGKPMIQHVFEQAK-QSGADRVIIATDNELVATAARNFGAE 65
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MT+++ +GTER E ++KL D I+VNIQGDEPLI P I+ V + L P +
Sbjct: 66 VCMTAKNHNSGTERLAEVVEKLVLPDDEIIVNIQGDEPLIPPIIVKQVAENLAKYPVNMA 125
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK--------SGKVNPQFPYLL 223
S AV ++ F+PN VK + D +GY +YFSR +IP+++ + K+ YL
Sbjct: 126 SLAVKIDDAKELFNPNVVKVLTDKNGYVLYFSRAVIPWDRDQFAQTDDTAKLRLNTEYLR 185
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDV 282
H+GI +Y + F+K Y PT L+ E LEQL+VL +G K+ V + + A GVD PED+
Sbjct: 186 HIGIYAYRAGFIKQYVQWQPTALEHIEKLEQLRVLWHGEKIHVELAKEVPAVGVDTPEDL 245
Query: 283 EKIESFMRER 292
EK+ S + E+
Sbjct: 246 EKVRSILSEK 255
>gi|313892349|ref|ZP_07825941.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Dialister
microaerophilus UPII 345-E]
gi|313119208|gb|EFR42408.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Dialister
microaerophilus UPII 345-E]
Length = 242
Score = 194 bits (492), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 102/242 (42%), Positives = 151/242 (62%), Gaps = 5/242 (2%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIP+R+AS+R GKPL I+GK +I+R +E++ A ++D ++VATD + I + + FG
Sbjct: 6 IIPSRYASTRLPGKPLKMIVGKTLIRRVYEQTSKAKSIDDVIVATDSKLIEKEVKGFGGK 65
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFS 172
V++TS+ GT+R E + + YDI+VN+QGDEPLIEPE+ID +V+ + +
Sbjct: 66 VVITSKKHNTGTDRIAEVAKNTD--YDIIVNVQGDEPLIEPELIDNLVREISTNDNLDMV 123
Query: 173 TAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDS 232
TA L+ + DP+ VK V + +G A+YFSR LIPY + P L H+GI +Y
Sbjct: 124 TAAAPLRESEYEDPSCVKVVRNIYGEALYFSRSLIPYPRH---EFSVPPLKHIGIYAYRK 180
Query: 233 NFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFMRER 292
FL Y + T L+ E LEQL++LENGYK+ V+ V GVD ED+EK+ +++ R
Sbjct: 181 EFLLKYANMKQTSLEKTESLEQLRLLENGYKIGVVTVKSYGIGVDTQEDLEKVIEYIKRR 240
Query: 293 NL 294
L
Sbjct: 241 EL 242
>gi|288928268|ref|ZP_06422115.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Prevotella sp.
oral taxon 317 str. F0108]
gi|288331102|gb|EFC69686.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Prevotella sp.
oral taxon 317 str. F0108]
Length = 249
Score = 194 bits (492), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 101/247 (40%), Positives = 149/247 (60%), Gaps = 9/247 (3%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR+ SSRF GKPL + GKP+IQR +E ++A LD VATDDE+I
Sbjct: 2 KFIGIIPARYGSSRFPGKPLAQLGGKPVIQRVYE--QVAQALDETYVATDDERIYNKVLA 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG +MTS ++GT+R NEA+QK+ YD+VVNIQGDEP ++ ID + +
Sbjct: 60 FGGKAVMTSTEHQSGTDRVNEAVQKIGGDYDVVVNIQGDEPFVQRSQIDVICQCFDTEGV 119
Query: 169 AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ-----FPYLL 223
+ + + ++ +PN K VV N G+A+YFSR +IP+ + P+ +P+L
Sbjct: 120 QIATLGIPFKTIDEVRNPNSPKIVVSNGGFAMYFSRSVIPFVRG--TEPEQWLEAYPFLK 177
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVE 283
HLGI +Y L+ L + L+ E LEQL+ L+NGY++KV E G+D PED++
Sbjct: 178 HLGIYAYRPEALRAITALPQSSLEKAESLEQLRWLQNGYQIKVGVTQVETVGIDTPEDLQ 237
Query: 284 KIESFMR 290
+ E F++
Sbjct: 238 RAEEFLK 244
>gi|398344568|ref|ZP_10529271.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Leptospira inadai
serovar Lyme str. 10]
Length = 246
Score = 193 bits (491), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 107/237 (45%), Positives = 142/237 (59%), Gaps = 5/237 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+V+G+IPARF SSRF GKPLVNI PMI T++ S ++ +D LVVATDDE+I
Sbjct: 5 KVLGVIPARFGSSRFPGKPLVNIGDFPMILWTYKNSLKSSLVDELVVATDDERILMIVLD 64
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
G + +MTS +GT+R E + + +VVNIQGDEP IE ++IDGV + D
Sbjct: 65 NGGNAVMTSPDHPSGTDRIREVALRF-PHFGVVVNIQGDEPGIEADLIDGVARLKIDRND 123
Query: 169 AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQ 228
+TA + P + DPNRVK V+D+ G A+YFSR IP V P HLGI
Sbjct: 124 WAMTTAAAPIGPAEITDPNRVKVVMDSKGKALYFSRSPIPSQFKKNV----PAFRHLGIY 179
Query: 229 SYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKI 285
+YD +FL YP L P+PL+ E LEQL+ LE GY + V + A VD P D++ +
Sbjct: 180 AYDRDFLLRYPDLPPSPLEESESLEQLRALEAGYSIGVHIAERAALSVDTPNDLKLV 236
>gi|325109478|ref|YP_004270546.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Planctomyces
brasiliensis DSM 5305]
gi|324969746|gb|ADY60524.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Planctomyces
brasiliensis DSM 5305]
Length = 258
Score = 193 bits (491), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 109/242 (45%), Positives = 143/242 (59%), Gaps = 11/242 (4%)
Query: 50 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQF 109
VVGIIPAR S+R K L+ GKP+IQ T+E + A LD +VVATD +IA+ C+ F
Sbjct: 3 VVGIIPARLQSTRLPNKLLLQETGKPLIQHTFEAVQGAEELDEIVVATDSPEIADVCRGF 62
Query: 110 GADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
GA V MT E C NGTER A++ L+ YD+VVNIQGDEP I+P ID V++LQA D
Sbjct: 63 GATVAMTGE-CANGTERAARAVETLQGSYDLVVNIQGDEPEIDPHGIDLCVRSLQAQTDC 121
Query: 170 VFSTAVTSLKPED-AFDPNRVKCVVDNHGYAIYFSRGLIPYNK---------SGKVNPQF 219
V ST ++ D DP VK V D G A+YFSR IP+++
Sbjct: 122 VMSTLANPIRTADQVIDPACVKVVCDGSGKALYFSRAPIPHSRDKTPADVLSDNTGQESS 181
Query: 220 PYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAP 279
P+L H+G+ +Y FL + L +PL+ E LEQL+VL+ G + V V+H A G+D P
Sbjct: 182 PWLQHIGLYAYRREFLLEFINLPASPLERLEQLEQLRVLQAGRAIHVSVVEHAATGIDTP 241
Query: 280 ED 281
D
Sbjct: 242 SD 243
>gi|422336244|ref|ZP_16417217.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Aggregatibacter
aphrophilus F0387]
gi|353346430|gb|EHB90715.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Aggregatibacter
aphrophilus F0387]
Length = 257
Score = 193 bits (491), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 108/251 (43%), Positives = 157/251 (62%), Gaps = 11/251 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR+ASSR GKPL +I+GKPMIQ +E++K + +++ATD++ +A + FGA+
Sbjct: 7 IIPARYASSRLPGKPLADIVGKPMIQHVFEQAK-QSGATRVIIATDNDLVAAAAKNFGAE 65
Query: 113 VIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MT+ES +GTER E ++KL +I+VNIQGDEPLI P I+ V + L P +
Sbjct: 66 VCMTAESHNSGTERLAEVVEKLAIPDNEIIVNIQGDEPLIPPVIVKQVAENLAKYPVNMA 125
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS--------GKVNPQFPYLL 223
S AV + E+ F+PN VK + D GY +YFSR +IP+++ K+ YL
Sbjct: 126 SLAVNIDEAEELFNPNVVKVLTDKDGYVLYFSRAVIPWDRDQFAQMDDVAKLQLNTQYLR 185
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDV 282
H+GI +Y + F+K Y PT L+ E LEQL+VL NG K+ V + + A GVD ED+
Sbjct: 186 HIGIYAYRAGFIKQYMQWQPTALEHIEKLEQLRVLWNGEKIHVELAKEVPAVGVDTAEDL 245
Query: 283 EKIESFMRERN 293
EK+ S + +++
Sbjct: 246 EKVRSILAKKS 256
>gi|422343375|ref|ZP_16424303.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Selenomonas
noxia F0398]
gi|355378682|gb|EHG25862.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Selenomonas
noxia F0398]
Length = 244
Score = 193 bits (490), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 103/244 (42%), Positives = 147/244 (60%), Gaps = 6/244 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+V+ IIPAR+AS+R GKPL +I GKPM+ R ER+ A + +VVATDD +I ++
Sbjct: 2 KVLCIIPARYASTRLPGKPLRDIAGKPMVVRVCERAARAKLVQDVVVATDDARICAAVEE 61
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
G +MT GT+R E +K+ + YD+++N+QGDEPLI+P +ID +V+ A
Sbjct: 62 HGGRAVMTRADHATGTDRLAEVAEKM-RDYDLIINVQGDEPLIDPGVIDALVEPFLADEK 120
Query: 169 AVFSTAVTSLKPEDAFD-PNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+TA T L E + PN VK +VD G A+YFSR IPY + NP H+GI
Sbjct: 121 LPMATAKTLLTDEAEMENPNNVKVIVDRAGNALYFSRARIPYAR----NPGAKVYKHIGI 176
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
+Y +FL Y + TPL+L E LEQL+ LENG++++VI+ D GVD ED+ +
Sbjct: 177 YAYRRDFLLAYARMAQTPLELSESLEQLRALENGHRIRVIETDAVFIGVDTEEDLAAANA 236
Query: 288 FMRE 291
R+
Sbjct: 237 AYRD 240
>gi|416892974|ref|ZP_11924298.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Aggregatibacter
aphrophilus ATCC 33389]
gi|347814672|gb|EGY31321.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Aggregatibacter
aphrophilus ATCC 33389]
Length = 257
Score = 193 bits (490), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 108/251 (43%), Positives = 157/251 (62%), Gaps = 11/251 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR+ASSR GKPL +I GKPMIQ +E++K + + +++ATD++ +A + FGA+
Sbjct: 7 IIPARYASSRLPGKPLADIAGKPMIQHVFEQAKQSGS-TRVIIATDNDLVAAAAKNFGAE 65
Query: 113 VIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MT+ES +GTER E ++KL +I+VNIQGDEPLI P I+ V + L P +
Sbjct: 66 VCMTAESHNSGTERLAEVVEKLAIPDNEIIVNIQGDEPLIPPVIVKQVAENLSKYPVNMA 125
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS--------GKVNPQFPYLL 223
S AV + E+ F+PN VK + D GY +YFSR +IP+++ K+ YL
Sbjct: 126 SLAVNIDEAEELFNPNVVKVLTDKDGYVLYFSRAVIPWDRDQFAQMDDVAKLQLNTQYLR 185
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDV 282
H+GI +Y + F+K Y PT L+ E LEQL+VL NG K+ V + + A GVD ED+
Sbjct: 186 HIGIYAYRAGFIKQYVQWQPTALEHIEKLEQLRVLWNGEKIHVELAKEVPAVGVDTAEDL 245
Query: 283 EKIESFMRERN 293
EK+ S + +++
Sbjct: 246 EKVRSILAKKS 256
>gi|251792697|ref|YP_003007423.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Aggregatibacter
aphrophilus NJ8700]
gi|247534090|gb|ACS97336.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Aggregatibacter
aphrophilus NJ8700]
Length = 257
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 107/251 (42%), Positives = 157/251 (62%), Gaps = 11/251 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR+AS+R GKPL +I+GKPMIQ +E++K + +++ATD++ +A + FGA+
Sbjct: 7 IIPARYASNRLPGKPLADIVGKPMIQHVFEQAK-QSGATRVIIATDNDLVAAAAKNFGAE 65
Query: 113 VIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MT+ES +GTER E ++KL +I+VNIQGDEPLI P I+ V + L P +
Sbjct: 66 VCMTAESHNSGTERLAEVVEKLAIPDNEIIVNIQGDEPLIPPAIVKQVAENLSKYPVNMA 125
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS--------GKVNPQFPYLL 223
S AV + E+ F+PN VK + D GY +YFSR +IP+++ K+ YL
Sbjct: 126 SLAVNIDEAEELFNPNVVKVLTDKDGYVLYFSRAVIPWDRDQFAQMDDVAKLQLNTQYLR 185
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDV 282
H+GI +Y + F+K Y PT L+ E LEQL+VL NG K+ V + + A GVD ED+
Sbjct: 186 HIGIYAYRAGFIKQYVQWQPTALEHIEKLEQLRVLWNGEKIHVELAKEVPAVGVDTAEDL 245
Query: 283 EKIESFMRERN 293
EK+ S + +++
Sbjct: 246 EKVRSILAKKS 256
>gi|255038792|ref|YP_003089413.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Dyadobacter
fermentans DSM 18053]
gi|254951548|gb|ACT96248.1| 3-deoxy-D-manno-octulosonatecytidylyltransferase [Dyadobacter
fermentans DSM 18053]
Length = 247
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 100/242 (41%), Positives = 151/242 (62%), Gaps = 7/242 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
R++GIIPAR+AS+RF K LV+I GK MIQR +E++ AT LD ++VATDDE+I ++
Sbjct: 2 RILGIIPARYASTRFPAKALVDIGGKSMIQRVYEQASKATQLDQVIVATDDERILYHVRE 61
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG +MTS+ ++GT+RC EAL + E YD V+NIQGDEP I PE ID + L +
Sbjct: 62 FGGQAVMTSQDHQSGTDRCFEALSQTEGTYDYVINIQGDEPFISPEPIDHLASVLNGETE 121
Query: 169 AVFSTAVTSLKPED-AFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF----PYLL 223
+T V + ++ F+ N K V++ +YFSR IPY ++ + +F +
Sbjct: 122 --LATLVKVIDNDEILFNVNVPKAVLNKRNEVMYFSRQTIPYLRNAQSQEEFLKSHVFYK 179
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVE 283
H+GI +Y ++ L L + L+ E LEQL+ LENGY +K + ++HGVD P+D++
Sbjct: 180 HIGIYAYRTDVLAEITKLPVSALEKAEALEQLRWLENGYAIKAVVTSDDSHGVDTPDDLD 239
Query: 284 KI 285
++
Sbjct: 240 RV 241
>gi|320529928|ref|ZP_08031005.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Selenomonas
artemidis F0399]
gi|320137946|gb|EFW29851.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Selenomonas
artemidis F0399]
Length = 244
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 102/244 (41%), Positives = 146/244 (59%), Gaps = 7/244 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+V+ IIPAR+AS+R GKPL +I GKPMI R +ER+ A + +VVATDDE+I +
Sbjct: 2 KVLCIIPARYASTRLPGKPLRDIAGKPMIVRVYERALRARLVQDVVVATDDERIRAAVEA 61
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
G +MT GT+R E ++ YD+++N+QGDEPLIEP +ID +V+ A
Sbjct: 62 HGGRAVMTRADHATGTDRLAEVAARM-TDYDLIINVQGDEPLIEPSVIDALVEPFLADET 120
Query: 169 AVFSTAVTS-LKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+TA T + + +PN VK + D G A+YFSR IPY + P H+GI
Sbjct: 121 LTMATAKTEIMDGAEQENPNNVKVITDKSGNALYFSRARIPYARV----PGAKVYKHIGI 176
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKI-E 286
+Y +FL Y + TPL+L E LEQL+ LENGY+++V++ D GVD ED+ + E
Sbjct: 177 YAYRRDFLLAYARMAQTPLELSESLEQLRALENGYRIRVVETDAVFIGVDTEEDLAAVNE 236
Query: 287 SFMR 290
++ R
Sbjct: 237 AYRR 240
>gi|313677300|ref|YP_004055296.1| 3-deoxy-d-manno-octulosonatecytidylyltransferase [Marivirga
tractuosa DSM 4126]
gi|312943998|gb|ADR23188.1| 3-deoxy-D-manno-octulosonatecytidylyltransferase [Marivirga
tractuosa DSM 4126]
Length = 246
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 104/239 (43%), Positives = 150/239 (62%), Gaps = 6/239 (2%)
Query: 50 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQF 109
++GIIPAR+ S+RF GKPLV+I GK MIQR E+ K ++ L +VVATDD++I E ++
Sbjct: 3 IIGIIPARYGSTRFPGKPLVDIGGKSMIQRVVEQCKKSSALKKVVVATDDDRIFEHVKEL 62
Query: 110 GADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
G +V MTS +NGTERC+EAL+ + YD V+NIQGDEP I+P+ ID + L +
Sbjct: 63 GHEVYMTSPDHKNGTERCHEALKLVNDSYDFVINIQGDEPFIDPKQIDLLASILNRKTE- 121
Query: 170 VFSTAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP---YLLHL 225
+T + ++ ED +PN +K + + G A+YFSR IP+ ++ + H+
Sbjct: 122 -IATLIKNIDDIEDLQNPNVIKALKADSGLALYFSRSPIPHMRNIPTEDWMKSHQHYKHI 180
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEK 284
GI +Y + L L PTPL+L E LEQL+ +ENGY+++ E G+D PEDVEK
Sbjct: 181 GIYAYRVDILAKLVTLSPTPLELAESLEQLRWIENGYRIRTAITPIETVGIDTPEDVEK 239
>gi|429737117|ref|ZP_19270990.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Selenomonas sp.
oral taxon 138 str. F0429]
gi|429153557|gb|EKX96339.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Selenomonas sp.
oral taxon 138 str. F0429]
Length = 244
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 102/247 (41%), Positives = 148/247 (59%), Gaps = 6/247 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+V+ IIPAR+AS+R GKPL +I GKPMI R +ER+ A + +VVATDDE+I ++
Sbjct: 2 KVLCIIPARYASTRLPGKPLRDIAGKPMIVRVYERAVRARLVQDVVVATDDERILAAVEK 61
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
G +MT GT+R E +K+ YD+++N+QGDEPLI+P +ID +V+ A
Sbjct: 62 HGGRAVMTRADHATGTDRLAEVAEKM-TDYDLIINVQGDEPLIDPAVIDALVEPFLADGS 120
Query: 169 AVFSTAVTSLKPEDAF-DPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+TA T L E+ +PN VK + D G A+YFSR IPY + NP H+GI
Sbjct: 121 LPMATAKTLLTDEEEMANPNNVKVITDQRGNALYFSRARIPYAR----NPGAQVYKHIGI 176
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
+Y +FL Y + T L+L E LEQL+ LENG+ ++VI+ D GVD ED+ +
Sbjct: 177 YAYRRDFLLAYARMAQTSLELSESLEQLRALENGHTIRVIETDAVFIGVDTEEDLAAVNE 236
Query: 288 FMRERNL 294
+++ +
Sbjct: 237 VYQKQGI 243
>gi|329121349|ref|ZP_08249975.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Dialister
micraerophilus DSM 19965]
gi|327469758|gb|EGF15224.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Dialister
micraerophilus DSM 19965]
Length = 242
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 102/242 (42%), Positives = 149/242 (61%), Gaps = 5/242 (2%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIP+R+AS+R GKPL I+GK +I+R +E++ A +D ++VATD + I + + FG
Sbjct: 6 IIPSRYASTRLPGKPLKMIVGKTLIRRVYEQTSKAKLIDDVIVATDSKLIEKEVKGFGGK 65
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFS 172
V++TS+ GT+R E + + YDI+VN+QGDEPLIEPE+ID +V+ + D
Sbjct: 66 VVITSKKHNTGTDRIAEVAKNTD--YDIIVNVQGDEPLIEPELIDNLVREISTNDDLDMV 123
Query: 173 TAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDS 232
TA L+ + DP+ VK V + +G A+YFSR LIPY + P L H+GI +Y
Sbjct: 124 TAAAPLRESEYEDPSCVKVVRNIYGEALYFSRSLIPYPRH---EFSVPPLKHIGIYAYRK 180
Query: 233 NFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFMRER 292
FL Y + T L+ E LEQL++LENGYK+ V+ GVD ED+EK+ +++ R
Sbjct: 181 EFLLKYANMKQTSLEKTESLEQLRLLENGYKIGVVTAKSYGIGVDTQEDLEKVIEYIKRR 240
Query: 293 NL 294
L
Sbjct: 241 EL 242
>gi|421100067|ref|ZP_15560706.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
borgpetersenii str. 200901122]
gi|410796882|gb|EKR99002.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
borgpetersenii str. 200901122]
Length = 246
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 109/249 (43%), Positives = 145/249 (58%), Gaps = 7/249 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+++GIIPAR+ASSRF GKPL I K MI+ T++ + +T L LVVATDD +I E +
Sbjct: 3 KILGIIPARYASSRFPGKPLAKIGDKTMIEWTYKNASRSTALSELVVATDDTRIHEVVRG 62
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG + +MT +GT+R E + + +Y +VVNIQGDEP IEPE+IDGV + P+
Sbjct: 63 FGGNSVMTRADHISGTDRIIEVVNRF-SEYSVVVNIQGDEPGIEPELIDGVASLKASHPE 121
Query: 169 AVFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
STA L DPNRVK ++D +G AIYFSR LIP + P HLGI
Sbjct: 122 WEMSTAAVPLIDFSHGEDPNRVKVIIDRNGKAIYFSRSLIP----SQFKKTVPLYRHLGI 177
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVE-KIE 286
YD NFL Y L + L+ E LEQL+ +E GY + V VD P D+E IE
Sbjct: 178 YGYDRNFLLKYNSLPKSNLEESESLEQLRAIEAGYGIGVYLAQEAGLSVDTPADLEIVIE 237
Query: 287 SFMRERNLS 295
F + + ++
Sbjct: 238 DFKKRKWIT 246
>gi|302342095|ref|YP_003806624.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Desulfarculus
baarsii DSM 2075]
gi|301638708|gb|ADK84030.1| 3-deoxy-D-manno-octulosonatecytidylyltransferase [Desulfarculus
baarsii DSM 2075]
Length = 244
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 100/239 (41%), Positives = 147/239 (61%), Gaps = 5/239 (2%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ SSRF GKPLV+I GKPMIQR ER A + + VATDD++IA+ FG
Sbjct: 6 VIPARYGSSRFPGKPLVDIGGKPMIQRVMERVAQAKGVQTVAVATDDQRIAQAVSAFGGR 65
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V++T R G++R A +L D +VVN+QGD+PL+ P++ID + + A D +
Sbjct: 66 VVLTDRPMRTGSDRVAHAAAELGLGPDELVVNVQGDQPLLPPQLIDELSAVMLADADVLM 125
Query: 172 STAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSY 230
+T VT + +PE+ DPN VK V+D G A+YFSR IP+ + G Q + HLG+ +
Sbjct: 126 ATPVTPIRRPEEIADPNHVKAVMDVRGDALYFSRLAIPHPRDGG---QVTFYKHLGVYIF 182
Query: 231 DSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFM 289
FL I+ GL L+ E LEQL+VLE+GYK++ + ++ VD P D +++ + +
Sbjct: 183 RKGFLDIFAGLADGVLEEAEKLEQLRVLEHGYKLRCVISQFDSPEVDRPADAQRVAALL 241
>gi|357058952|ref|ZP_09119798.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Selenomonas
infelix ATCC 43532]
gi|355373298|gb|EHG20619.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Selenomonas
infelix ATCC 43532]
Length = 244
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 106/246 (43%), Positives = 149/246 (60%), Gaps = 11/246 (4%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+V+ IIPAR+AS+R GKPL +I GKPMI R +ER+ A + +VVATDDE+I ++
Sbjct: 2 KVLCIIPARYASTRLPGKPLRDIAGKPMIVRVYERAVRAKLVQDVVVATDDERIRAAVEE 61
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
G +MT GT+R E +K+ YD+++N+QGDEPLI+P +ID +V+
Sbjct: 62 HGGRAVMTRVDHATGTDRLAEVAEKM-TDYDLIINVQGDEPLIDPAVIDALVEPFLVDET 120
Query: 169 AVFSTAVTSLKPEDAF-DPNRVKCVVDNHGYAIYFSRGLIPY--NKSGKVNPQFPYLLHL 225
+TA T L E+ +PN VK + D G A+YFSR IPY N+ KV H+
Sbjct: 121 LPMATAKTLLMDEEEIVNPNNVKVITDLSGNALYFSRARIPYARNEGAKVYK------HI 174
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKI 285
GI +Y +FL Y + TPL+L E LEQL+ LENGY ++VI+ D GVD ED+ +
Sbjct: 175 GIYAYRRDFLLSYARMAQTPLELSESLEQLRALENGYTIRVIETDAVFIGVDTEEDLAAV 234
Query: 286 -ESFMR 290
E ++R
Sbjct: 235 NEEYIR 240
>gi|398349560|ref|ZP_10534263.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Leptospira broomii
str. 5399]
Length = 246
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 106/238 (44%), Positives = 142/238 (59%), Gaps = 5/238 (2%)
Query: 48 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQ 107
S+V+G+IPARF SSRF GKPLVNI PMI T++ S ++ ++ LVVATDDE+I
Sbjct: 4 SKVLGVIPARFGSSRFPGKPLVNIGDFPMILWTYKNSLKSSLVNELVVATDDERILMVVL 63
Query: 108 QFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
G + +MTS +GT+R E + + +VVNIQGDEP IE E+IDGV +
Sbjct: 64 DNGGNAVMTSPDHPSGTDRIREVALRF-PHFGVVVNIQGDEPGIEAELIDGVARLKIDRN 122
Query: 168 DAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
D +TA + P + DPNRVK V+D+ G A+YFSR IP + P HLGI
Sbjct: 123 DWAMTTAAAPMDPVEITDPNRVKVVMDSKGKALYFSRSPIP----SQFKKNVPAFRHLGI 178
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKI 285
+YD +FL YP L +PL+ E LEQL+ LE GY + V + A VD P D++ +
Sbjct: 179 YAYDRDFLLSYPDLPASPLEDSESLEQLRALEAGYSIGVHITERAALSVDTPNDLKLV 236
>gi|62185185|ref|YP_219970.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydophila
abortus S26/3]
gi|81312651|sp|Q5L5S2.1|KDSB_CHLAB RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|62148252|emb|CAH64017.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydophila
abortus S26/3]
Length = 254
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 101/247 (40%), Positives = 150/247 (60%), Gaps = 5/247 (2%)
Query: 44 KNFRSRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIA 103
+ F S+ VG++PAR+ S RF GKPL ILGK +IQRT+E + TLD +VVATDD++I
Sbjct: 4 QTFISKKVGVLPARWGSVRFPGKPLAMILGKSLIQRTYENIIQSETLDKVVVATDDQRIM 63
Query: 104 ECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKAL 163
+ FG +MTS C NGTER E + + + +I+VNIQGDEP + ++D +V+ L
Sbjct: 64 DHVLDFGGACLMTSPECANGTERMAETVSRYFPEAEIMVNIQGDEPCLRHTVVDALVRKL 123
Query: 164 QAAPDAVFSTAVT-SLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYL 222
+ P+ T V + + +VKCV D +G A+YFSR IP+ + + P
Sbjct: 124 EEHPEIQMVTPVAQTTDSHEILTNQKVKCVFDKNGKALYFSRSPIPH----ILKKETPIY 179
Query: 223 LHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDV 282
LH+G+ ++ + L Y P+PL EDLEQL+VLE+G + V V+ ++ VD PED+
Sbjct: 180 LHIGVYAFRRSALFSYIASAPSPLSQAEDLEQLRVLEHGGSIHVCVVEAKSPSVDYPEDI 239
Query: 283 EKIESFM 289
K+E ++
Sbjct: 240 SKVEEYL 246
>gi|158520985|ref|YP_001528855.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Desulfococcus
oleovorans Hxd3]
gi|226724281|sp|A8ZWH0.1|KDSB_DESOH RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|158509811|gb|ABW66778.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Desulfococcus
oleovorans Hxd3]
Length = 248
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 99/243 (40%), Positives = 150/243 (61%), Gaps = 4/243 (1%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
++ IIP+R+ S+RF GKPL I G PMIQR +++ K A + + VATDD +I E +
Sbjct: 2 KIAAIIPSRYGSTRFAGKPLAPIAGIPMIQRVYDQVKQAICVTDIAVATDDRRIVEAVTR 61
Query: 109 FGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
FG + +MTS +CR+GT+R EA +++ DIVVNIQGD+PLI P+ ID + L + P
Sbjct: 62 FGGNALMTSAACRSGTDRAAEAAKQMGLAPEDIVVNIQGDQPLIAPQTIDETLAPLLSDP 121
Query: 168 DAVFSTAVTS-LKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLG 226
D +TA + + ++ +P VK V D G+A+YFSR IP+ + + +F HLG
Sbjct: 122 DLGMTTAAFAIMDKQEITNPKDVKMVFDADGFALYFSRSPIPFARDK--DTRFDTFKHLG 179
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIE 286
I +Y FL I+ L L+ E LEQL+ LE+ +++K + +++ VD PED+ +IE
Sbjct: 180 IYAYTRRFLDIFTQLPNGVLEEIEKLEQLRALEHSHRIKTVVTRYDSPEVDIPEDIPRIE 239
Query: 287 SFM 289
+ M
Sbjct: 240 AMM 242
>gi|282856190|ref|ZP_06265473.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pyramidobacter
piscolens W5455]
gi|282585949|gb|EFB91234.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pyramidobacter
piscolens W5455]
Length = 242
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 110/249 (44%), Positives = 144/249 (57%), Gaps = 14/249 (5%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR+ASSR GKPL ++ GKP+IQ +ER A +L ++VATDDE+I
Sbjct: 2 KTIGIIPARWASSRLPGKPLADLCGKPVIQHVYERCLKARSLAQVIVATDDERIMSAVAA 61
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKAL--QAA 166
FG +MTS NGT R E ++E Y VVNIQGDEPLI+P +ID + L A
Sbjct: 62 FGGRAVMTSSHHSNGTSRVAEVAARVECDY--VVNIQGDEPLIDPRVIDQLAGVLLHADA 119
Query: 167 PDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLL-HL 225
P A S +S E+A DPN VK VVD G A+YFSR +IP+ + G P + H+
Sbjct: 120 PMATLSAPFSS--AEEAADPNNVKVVVDRKGRALYFSRSVIPFARCGT-----PVVYKHI 172
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGV--DAPEDVE 283
GI Y +FL +Y L TPL E LEQL+ LE+GY + V + GV + P D+E
Sbjct: 173 GIYGYRKDFLPVYSRLAETPLAEAESLEQLRALEHGYDIAVAVSAYPDRGVGINTPHDLE 232
Query: 284 KIESFMRER 292
M E+
Sbjct: 233 LARKLMSEK 241
>gi|313894577|ref|ZP_07828140.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Veillonella sp.
oral taxon 158 str. F0412]
gi|313440767|gb|EFR59196.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Veillonella sp.
oral taxon 158 str. F0412]
Length = 243
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 97/239 (40%), Positives = 142/239 (59%), Gaps = 4/239 (1%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ S+R GKPL +I GKPMI+R ++R AT + +VATDD+++ QQFG
Sbjct: 6 VIPARYGSTRLPGKPLADIAGKPMIERVYDRVSQATKTECTIVATDDDRVYSAVQQFGGT 65
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFS 172
V+MT + GT+R E D+V+N+QGDEP+IEP +ID + + P+ +
Sbjct: 66 VMMTDPNHPTGTDRLAEVASHY-TDLDVVINVQGDEPMIEPNLIDDLAHLFEEDPNLQMA 124
Query: 173 TAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDS 232
T T L E+ +P+ VK +++N A+YFSR LIPY + V L H+GI +Y
Sbjct: 125 TVATPLLEEEYDEPSAVKVILNNRNDAMYFSRSLIPYPRHDFVRTP---LKHIGIYAYRR 181
Query: 233 NFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFMRE 291
+FL Y + PT + E LEQL+ LENGY ++VI D GVD PED+ ++ + +
Sbjct: 182 DFLLNYAKMEPTAAEQTESLEQLRALENGYTIRVILTDKRFIGVDTPEDLARVNAIYEQ 240
>gi|407459410|ref|YP_006737513.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Chlamydia
psittaci M56]
gi|405785778|gb|AFS24523.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Chlamydia
psittaci M56]
Length = 254
Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 102/247 (41%), Positives = 151/247 (61%), Gaps = 5/247 (2%)
Query: 44 KNFRSRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIA 103
K F S+ VG++PAR++S RF GKPL ILGK +IQRT+E + TLD +VVATDD++I
Sbjct: 4 KTFISKKVGVLPARWSSVRFPGKPLAMILGKSLIQRTYENIIQSETLDKVVVATDDQRIM 63
Query: 104 ECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKAL 163
+ FG + +MTS C NGTER E + + +I+VNIQGDEP + ++D +V+ L
Sbjct: 64 DHVIDFGGECVMTSPECANGTERMAETVSHYFPEAEIMVNIQGDEPCLCHTVVDALVRKL 123
Query: 164 QAAPDAVFSTAVT-SLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYL 222
+ P+ T V + + +VKCV D +G A+YFSR IP+ + + P
Sbjct: 124 EEYPEIQMVTPVAKTTDSHEILTNQKVKCVFDKNGKALYFSRSPIPH----ILKKETPIY 179
Query: 223 LHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDV 282
LH+G+ ++ + L Y P+PL EDLEQL+VLE+G + V V+ ++ VD PED+
Sbjct: 180 LHIGVYAFRRSALFNYIASAPSPLSQAEDLEQLRVLEHGGSIHVCVVEAKSPSVDYPEDI 239
Query: 283 EKIESFM 289
K+E ++
Sbjct: 240 NKVEEYL 246
>gi|415951273|ref|ZP_11557071.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Herbaspirillum
frisingense GSF30]
gi|407757529|gb|EKF67494.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Herbaspirillum
frisingense GSF30]
Length = 426
Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 97/243 (39%), Positives = 145/243 (59%), Gaps = 8/243 (3%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
R + +IPARF SSR GKPL +ILGKPMIQ +ER K L +VVATDDE+I
Sbjct: 2 RCIAVIPARFGSSRLPGKPLADILGKPMIQHVYERVKTLEELADVVVATDDERIVAAVTA 61
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG ++TS +GT+R E +Q D+ +N+QGDEPL+ P + +++A+ AP
Sbjct: 62 FGGKAVLTSPDHPSGTDRLREVMQ--HHPADLYLNVQGDEPLVNPAHLRSLLQAMLGAPQ 119
Query: 169 AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK--SGKVNPQFPYLLHLG 226
T + +A +PN VK V + G A+YFSR IP+ + +GK Y H+G
Sbjct: 120 VQVGTLCHPISASEAENPNTVKVVRNRAGDALYFSRARIPFERESTGKTR----YFKHIG 175
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIE 286
+ +Y + L +P L + L+ E LEQL++++ G++++VI+VDH A GVD P +E++
Sbjct: 176 VYAYRAELLAAFPELPASELERAEMLEQLRIMDAGWQIRVIEVDHAATGVDTPACLERVR 235
Query: 287 SFM 289
+ M
Sbjct: 236 ALM 238
>gi|94265749|ref|ZP_01289485.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [delta
proteobacterium MLMS-1]
gi|93453724|gb|EAT04102.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [delta
proteobacterium MLMS-1]
Length = 253
Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 98/242 (40%), Positives = 148/242 (61%), Gaps = 5/242 (2%)
Query: 47 RSRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECC 106
+++VV +IPAR+ S+RF GKPL +ILGKPMIQR +ER+ L + VATDD +I +C
Sbjct: 8 QAKVVAVIPARYHSNRFAGKPLADILGKPMIQRVYERAMAVGLLSRVAVATDDRRIVDCV 67
Query: 107 QQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQA 165
Q FG + +MT +GT+R EA+ + ++D+VVNIQGD+PL + +++ V + L
Sbjct: 68 QAFGGEAVMTRADHVSGTDRLAEAVTLMNIDEHDVVVNIQGDQPLFDAAVVEQVARPLLD 127
Query: 166 APDAVFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS-GKVNPQFPYLL 223
P +T + + +P + DPN VK V D G A+YFSR IP+ + G + P Y
Sbjct: 128 DPALPMATLIYRIVRPAEINDPNHVKTVFDRQGRALYFSRSPIPHQRDPGGITPT--YYK 185
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVE 283
HLG +Y FL + GL + E LEQL+ LE GY ++V+ +H++ VD P D++
Sbjct: 186 HLGFYAYRKGFLLTFVGLPEGEWEHFEKLEQLRALEYGYTIQVVLTEHDSVEVDKPADLQ 245
Query: 284 KI 285
++
Sbjct: 246 RV 247
>gi|212693161|ref|ZP_03301289.1| hypothetical protein BACDOR_02668 [Bacteroides dorei DSM 17855]
gi|423238365|ref|ZP_17219481.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bacteroides dorei
CL03T12C01]
gi|212664266|gb|EEB24838.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Bacteroides
dorei DSM 17855]
gi|392648048|gb|EIY41738.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bacteroides dorei
CL03T12C01]
Length = 252
Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 102/251 (40%), Positives = 155/251 (61%), Gaps = 10/251 (3%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR+AS+RF KPL + GKP+IQR +E ++A LD VATDDE+I +
Sbjct: 2 KFIGIIPARYASTRFPAKPLAILGGKPVIQRVYE--QVAGILDEAYVATDDERIESAVKA 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG V+MTS ++GT+RC EA K+ + YD+VVNIQGDEP I+ ++ V + +
Sbjct: 60 FGGKVVMTSVHHKSGTDRCYEAYTKVGQGYDVVVNIQGDEPFIQRSQLEAVKACFEDSAT 119
Query: 169 AVFSTAVTSLKPEDAFDP----NRVKCVVDNHGYAIYFSRGLIPYNKSGKVN---PQFPY 221
+ +T V PED F+ N K VV+ + A+YFSR +IP+ ++ + + Y
Sbjct: 120 QI-ATLVKPFTPEDGFEALENVNSPKVVVNKNMNALYFSRSVIPFQRNAEKEGWLKEHTY 178
Query: 222 LLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPED 281
H+G+ +Y ++ LK L + L+L E LEQL+ LENGY +KV + E G+D P+D
Sbjct: 179 YKHIGLYAYRADVLKEITSLPQSSLELAESLEQLRWLENGYTIKVGISEVETIGIDTPQD 238
Query: 282 VEKIESFMRER 292
+ + E+F+++R
Sbjct: 239 LARAEAFLKQR 249
>gi|408672003|ref|YP_006871751.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Emticicia
oligotrophica DSM 17448]
gi|387853627|gb|AFK01724.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Emticicia
oligotrophica DSM 17448]
Length = 246
Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 107/247 (43%), Positives = 157/247 (63%), Gaps = 8/247 (3%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+++GIIPARFASSRF GKPLV+I GK MIQR +E+++ A +L + VATDD++I +
Sbjct: 2 KILGIIPARFASSRFPGKPLVDIGGKSMIQRVYEQAQKAPSLTSVAVATDDQRIYDHVLG 61
Query: 109 FGADVIMTSESCRNGTERCNEALQKL--EKKYDIVVNIQGDEPLIEPEIIDGVVKALQAA 166
FG +V MTSE+ +GT+RC EA QK K+D V+NIQGDEP I+P II+ + + L +
Sbjct: 62 FGGEVYMTSENHPSGTDRCYEAYQKAGGSSKFDYVINIQGDEPFIDPAIIEQMAELLDSK 121
Query: 167 PDAVFSTAVTSLKPEDA-FDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF---PYL 222
+ +TAV +K + FDPN VK V+ +YFSR +PY + +
Sbjct: 122 TE--IATAVKKIKDYNMLFDPNVVKAVLALGKQCLYFSRQTLPYVRGEAPESWLDHADFY 179
Query: 223 LHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDV 282
H+G+ +Y S+ L+ L P+ L+ E LEQL+ LE+GYK+ ++E+ GVD PED+
Sbjct: 180 KHIGLYAYRSDVLEKIALLQPSKLENTEKLEQLRWLEHGYKIFATITEYESIGVDTPEDL 239
Query: 283 EKIESFM 289
K++ F+
Sbjct: 240 GKLKDFV 246
>gi|416051537|ref|ZP_11577585.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Aggregatibacter
actinomycetemcomitans serotype e str. SC1083]
gi|347992970|gb|EGY34347.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Aggregatibacter
actinomycetemcomitans serotype e str. SC1083]
Length = 257
Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 108/251 (43%), Positives = 155/251 (61%), Gaps = 11/251 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR+ASSR GKPL +I GKPMIQ +E++K + D +++ATD+E +A + FGA+
Sbjct: 7 IIPARYASSRLPGKPLTDIAGKPMIQHVFEQAK-QSGADRIIIATDNELVAAAAENFGAE 65
Query: 113 VIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MT+ES +GTER E ++KL +I+VNIQGDEPLI P I+ V + L P +
Sbjct: 66 VCMTAESHNSGTERLAEVVKKLALPDNEIIVNIQGDEPLIPPIIVKQVAENLAKYPVNMA 125
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS--------GKVNPQFPYLL 223
S AV E+ F+PN VK + D +GY +YFSR +IP+++ + YL
Sbjct: 126 SLAVKINNAEELFNPNVVKVLTDKNGYVLYFSRAVIPWDRDQFAQMSDMATLRLNTEYLR 185
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDV 282
H+GI +Y + F+K Y PT L+ E LEQL+VL +G K+ V + A GVD ED+
Sbjct: 186 HIGIYAYRAGFIKQYVQWQPTALEHIEKLEQLRVLWHGEKIHVELAKAVPAVGVDTIEDL 245
Query: 283 EKIESFMRERN 293
EK+ S + +++
Sbjct: 246 EKVRSILTKKS 256
>gi|398331708|ref|ZP_10516413.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Leptospira
alexanderi serovar Manhao 3 str. L 60]
Length = 246
Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 109/249 (43%), Positives = 146/249 (58%), Gaps = 7/249 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+++G+IPAR+ASSRF GKPL I K MI+ T+ + + TL LVVATDDE+I E Q
Sbjct: 3 KILGVIPARYASSRFPGKPLAKIGDKTMIEWTYFNASRSFTLSELVVATDDERIHEVVQG 62
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG + +MT +GT+R E + + +Y ++VNIQGDEP IEPE+IDGV + P+
Sbjct: 63 FGGNSVMTRADHISGTDRIIEVVNRF-PEYSVIVNIQGDEPGIEPELIDGVASLKASHPE 121
Query: 169 AVFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
STA L DPNRVK ++D +G AIYFSR LIP +V P HLGI
Sbjct: 122 WEMSTAAVPLIDFSHGEDPNRVKVIIDRNGKAIYFSRSLIPSQFKTRV----PLYRHLGI 177
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVE-KIE 286
YD +FL Y L + L+ E LEQL+ +E GY + V VD P D+E IE
Sbjct: 178 YGYDRDFLLKYNSLPKSNLEESESLEQLRAIEAGYGIGVYLAQEAGLSVDTPSDLEIVIE 237
Query: 287 SFMRERNLS 295
F + + ++
Sbjct: 238 DFKKRKWIT 246
>gi|406893964|gb|EKD38887.1| hypothetical protein ACD_75C00571G0001, partial [uncultured
bacterium]
Length = 242
Score = 191 bits (485), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 100/239 (41%), Positives = 145/239 (60%), Gaps = 2/239 (0%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR+ S+RF GKPL I GKPMIQ ER++ L +VVATDD++IA C Q FG +
Sbjct: 1 IIPARYESNRFRGKPLALIAGKPMIQHVVERARAVKMLSRVVVATDDQRIASCVQDFGGE 60
Query: 113 VIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
++T +G++R EA + L+ ++D+VVNIQGD+PL E+++ V + L P
Sbjct: 61 YVITRNDHVSGSDRLAEAAELLKISEHDVVVNIQGDQPLFPAEVVEQVAQPLLDDPALPM 120
Query: 172 STAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSY 230
ST + + +PE+ DPN VK V D YA+YFSR IP+ ++ + + Y HLG +Y
Sbjct: 121 STLIYKIIRPEEINDPNHVKTVFDRDFYALYFSRSPIPFQRNPEETVRPTYYKHLGFYAY 180
Query: 231 DSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFM 289
FL + L + E LEQL+ LE GYK+K+ H++ VD PED+ ++E F+
Sbjct: 181 RKGFLLSFVALPEGEWERFEKLEQLRALEYGYKIKLTITQHDSIEVDTPEDLRRVEQFL 239
>gi|261867898|ref|YP_003255820.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|415768877|ref|ZP_11484031.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Aggregatibacter
actinomycetemcomitans D17P-2]
gi|416107611|ref|ZP_11590578.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Aggregatibacter
actinomycetemcomitans serotype c str. SCC2302]
gi|444346618|ref|ZP_21154582.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Aggregatibacter
actinomycetemcomitans serotype c str. AAS4A]
gi|261413230|gb|ACX82601.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|348005160|gb|EGY45649.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Aggregatibacter
actinomycetemcomitans serotype c str. SCC2302]
gi|348657723|gb|EGY75309.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Aggregatibacter
actinomycetemcomitans D17P-2]
gi|443541436|gb|ELT51863.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Aggregatibacter
actinomycetemcomitans serotype c str. AAS4A]
Length = 257
Score = 191 bits (485), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 107/250 (42%), Positives = 157/250 (62%), Gaps = 11/250 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR+ASSR GKPL +I GKPMI+ +E++K + D +++ATD+E +A + FGA+
Sbjct: 7 IIPARYASSRLPGKPLADIAGKPMIKHVFEQAK-QSGADRVIIATDNELVATAARNFGAE 65
Query: 113 VIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MT+E+ +GTER E ++KL +I+VNIQGDEPLI P I+ V + L P +
Sbjct: 66 VCMTAENHNSGTERLAEVVEKLALPDNEIIVNIQGDEPLIPPVIVKQVAENLAKYPVNMA 125
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK--------SGKVNPQFPYLL 223
S AV E+ F+PN VK + + +GY +YFSR +IP+++ + K+ YL
Sbjct: 126 SLAVKIDDAEELFNPNVVKVLTNKNGYVLYFSRAVIPWDRDQFAQIDDAAKLRLNTEYLR 185
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDV 282
H+GI +Y + F+K Y PT L+ E LEQL+VL +G K+ V + + A GVD ED+
Sbjct: 186 HIGIYAYRAGFIKQYVQWQPTALEHIEKLEQLRVLWHGEKIHVELAKEVPAVGVDTAEDL 245
Query: 283 EKIESFMRER 292
EK+ S + E+
Sbjct: 246 EKVRSILSEK 255
>gi|116329292|ref|YP_799012.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Leptospira
borgpetersenii serovar Hardjo-bovis str. L550]
gi|116330101|ref|YP_799819.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Leptospira
borgpetersenii serovar Hardjo-bovis str. JB197]
gi|122282130|sp|Q04VK9.1|KDSB_LEPBJ RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|122282927|sp|Q04XW6.1|KDSB_LEPBL RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|116122036|gb|ABJ80079.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Leptospira
borgpetersenii serovar Hardjo-bovis str. L550]
gi|116123790|gb|ABJ75061.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Leptospira
borgpetersenii serovar Hardjo-bovis str. JB197]
Length = 246
Score = 191 bits (485), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 109/249 (43%), Positives = 145/249 (58%), Gaps = 7/249 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+++G+IPAR+ASSRF GKPLV I K MI+ T+ + +T L LVVATDD +I E Q
Sbjct: 3 KILGVIPARYASSRFPGKPLVKIGDKTMIEWTYRNASRSTALSELVVATDDTRIHEVVQG 62
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG + +MT +GT+R E + L +Y I++NIQGDEP IEPE+IDGV + P+
Sbjct: 63 FGGNSVMTRADHISGTDRIIE-VANLFSEYSIIINIQGDEPGIEPELIDGVAGLKASHPE 121
Query: 169 AVFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
STA L DPNRVK ++D +G AIYFSR LIP + P HLGI
Sbjct: 122 WKMSTAAVPLIDFSHGEDPNRVKVIIDRNGKAIYFSRSLIP----SQFKQTVPLYRHLGI 177
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVE-KIE 286
YD +FL Y L + L+ E LEQL+ +E GY + V VD P D+E IE
Sbjct: 178 YGYDRDFLLKYNSLPKSNLEESESLEQLRAIEAGYGIGVYLAQEAGLSVDTPADLEVVIE 237
Query: 287 SFMRERNLS 295
F + + ++
Sbjct: 238 DFKKRKWIT 246
>gi|342214604|ref|ZP_08707288.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Veillonella sp.
oral taxon 780 str. F0422]
gi|341591645|gb|EGS34776.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Veillonella sp.
oral taxon 780 str. F0422]
Length = 243
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 98/243 (40%), Positives = 139/243 (57%), Gaps = 4/243 (1%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
R+ IIPAR+ S+R GKPL I KPMIQR +E+ AT ++VATDDE++ E Q
Sbjct: 2 RIACIIPARYGSTRLPGKPLAMIGNKPMIQRVYEQVSKATETHEVIVATDDERVYEAVIQ 61
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG V+MT GT+R E + D+++N+QGDEPLI+ +ID + + +
Sbjct: 62 FGGQVMMTRADHLTGTDRLAE-VASTRTDIDVIINVQGDEPLIDASVIDALARQFKEDST 120
Query: 169 AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQ 228
T L + +P+ VK +V+ G A+YFSR LIP+ + V P L H+G+
Sbjct: 121 LQMGTVGCPLLESEYNEPSAVKVIVNRLGNAMYFSRSLIPHPRHAFV---VPPLKHVGMY 177
Query: 229 SYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESF 288
Y+ FL Y + PTP +L E LEQL+ LENGY ++VI D GVD PED+E++
Sbjct: 178 GYNRQFLLTYAKMEPTPAELTESLEQLRALENGYTIRVITTDQRFVGVDTPEDLERVNEI 237
Query: 289 MRE 291
+
Sbjct: 238 FHQ 240
>gi|451981769|ref|ZP_21930114.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase (modular protein)
[Nitrospina gracilis 3/211]
gi|451760979|emb|CCQ91379.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase (modular protein)
[Nitrospina gracilis 3/211]
Length = 319
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 147/232 (63%), Gaps = 14/232 (6%)
Query: 47 RSRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECC 106
+ RVV +IPAR+AS+RF GKPL + G+PMIQ ER++LA +++ ++VATDDE+I +
Sbjct: 4 KPRVVAVIPARWASTRFPGKPLAPLSGRPMIQWVVERARLAPSINDVIVATDDERIVKAV 63
Query: 107 QQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAA 166
++FG + +MTS +G++R E + K + D+VVN+QGDEPLI PE I+ VV+ L
Sbjct: 64 EEFGGNAVMTSVDHPSGSDRIAEVVSK--RSCDVVVNVQGDEPLIPPEDIEQVVQILIQD 121
Query: 167 PDAVFSTAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVN--------- 216
A +T ++++ ED FDPN VK V G A+YFSR +PY + N
Sbjct: 122 KQAAVATLMSAIDNYEDVFDPNVVKVVTGGDGRALYFSRSPVPYLRDSWQNPSPDRVKDQ 181
Query: 217 --PQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV 266
P+ + H+G+ +Y +FL Y + PTPL+ E LEQL++LENGY +KV
Sbjct: 182 PVPERTWFRHIGLYAYRRDFLLQYTRMAPTPLEQREKLEQLRILENGYCIKV 233
>gi|376298153|ref|YP_005169383.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Desulfovibrio
desulfuricans ND132]
gi|323460715|gb|EGB16580.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Desulfovibrio
desulfuricans ND132]
Length = 246
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 97/239 (40%), Positives = 147/239 (61%), Gaps = 5/239 (2%)
Query: 52 GIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGA 111
GIIPAR+ SSRF GKPLV I GKPM W R+ + + +ATDD +I + Q G
Sbjct: 9 GIIPARYDSSRFPGKPLVEIGGKPMFWHVWSRASACPQMTSVTLATDDARIFDAAQALGV 68
Query: 112 DVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAV 170
V+MT +GT+R EA + L D +VVNIQGDEP +EP ++ +++ + +
Sbjct: 69 PVVMTRRDHSSGTDRVLEAARALSIDSDAVVVNIQGDEPCLEPGMLTELLRPFEDR-RVM 127
Query: 171 FSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSY 230
+T TS+ P++A P+RVK V G A+YFSR L+P+++ GK++ +LLH+G+ +
Sbjct: 128 VTTLATSIGPDEAASPDRVKVVRAKDGRALYFSRSLVPFDRDGKLH---GFLLHIGLYGF 184
Query: 231 DSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFM 289
L+ + L P+PL+ E LEQL++LE+G + V + H HGVD PED+ K+++ +
Sbjct: 185 RMEALERFGSLDPSPLEQREKLEQLRLLEDGIDIYVTETRHACHGVDRPEDLVKVKTIL 243
>gi|332879277|ref|ZP_08446974.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Capnocytophaga
sp. oral taxon 329 str. F0087]
gi|357048030|ref|ZP_09109608.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Paraprevotella
clara YIT 11840]
gi|332682697|gb|EGJ55597.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Capnocytophaga
sp. oral taxon 329 str. F0087]
gi|355529095|gb|EHG98549.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Paraprevotella
clara YIT 11840]
Length = 252
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 104/250 (41%), Positives = 151/250 (60%), Gaps = 10/250 (4%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
+GIIPAR+AS+RF GKPL + GKP+IQR +E +++ +D ++VATDDE+I + + FG
Sbjct: 4 IGIIPARYASTRFPGKPLAMLGGKPVIQRVYE--QVSGVMDDVLVATDDERILKTVEGFG 61
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAV 170
+MT ++GT+RC EA K YD+VVNIQGDEP I+P+ ++ VKA P
Sbjct: 62 GKAVMTRADHKSGTDRCYEAYVLQGKPYDVVVNIQGDEPFIQPQQLEA-VKACFEDPQTE 120
Query: 171 FSTAVTSLKPEDAF----DPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP---YLL 223
+T V P D + + N K VV+ A+YFSR +IPY ++ Y
Sbjct: 121 IATLVKPFTPADGWPALENVNSPKVVVNRRMQALYFSRSIIPYQRNKDKAEWLKGHVYYK 180
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVE 283
H+G+ +Y ++ LK L +PL+L E LEQL+ LENGY +KV + E G+D P D+E
Sbjct: 181 HIGLYAYKADVLKELTSLPQSPLELAESLEQLRWLENGYTIKVGISEIETIGIDTPADLE 240
Query: 284 KIESFMRERN 293
E+F++ R
Sbjct: 241 AAEAFLKNRT 250
>gi|288800192|ref|ZP_06405651.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Prevotella sp.
oral taxon 299 str. F0039]
gi|288333440|gb|EFC71919.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Prevotella sp.
oral taxon 299 str. F0039]
Length = 253
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 102/252 (40%), Positives = 150/252 (59%), Gaps = 11/252 (4%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ + IIPAR+ SSRF GKPL I GK +IQR +E++ ++ L+ + VATDDE+I + +
Sbjct: 2 KFICIIPARYGSSRFPGKPLAVIKGKTVIQRVYEKA--SSVLEDVYVATDDERIFKEVEN 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG +VIMT +GT+R EA+ K+ D+V+NIQGDEP I+P I + +
Sbjct: 60 FGGNVIMTRSDHESGTDRIEEAVSKISVPCDVVINIQGDEPFIDPSQIQTLCNSFNDEQT 119
Query: 169 AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPY------NKSGK---VNPQF 219
+ + +D +PN K V+DN+ YA+YFSR +IP+ NK G+ + F
Sbjct: 120 QIATLGKPFTTTKDVLNPNSPKIVMDNNNYALYFSRNMIPFIKGVDINKLGEDTNITDTF 179
Query: 220 PYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAP 279
PYL H+GI +Y + L L P+ L+ E LEQL+ L+NGYK+KV + E G+D P
Sbjct: 180 PYLKHIGIYAYRRSVLSEITRLEPSSLEKTEGLEQLRWLQNGYKIKVGLTNIETIGIDTP 239
Query: 280 EDVEKIESFMRE 291
ED+ K F+ +
Sbjct: 240 EDLTKATLFLEQ 251
>gi|445120556|ref|ZP_21379318.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Prevotella
nigrescens F0103]
gi|444839286|gb|ELX66362.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Prevotella
nigrescens F0103]
Length = 251
Score = 191 bits (484), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 101/249 (40%), Positives = 154/249 (61%), Gaps = 7/249 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR+ASSRF GKPL + GK +IQR E +++T L+ + +ATDD++I
Sbjct: 2 KAIGIIPARYASSRFPGKPLAVLGGKYVIQRVME--QVSTVLNDVYIATDDKRIYNTVTS 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
GA IMT+ ++GT+R EAL+++ +D+VVNIQGDEP I+ I+ V+
Sbjct: 60 LGAKAIMTNSDHQSGTDRVAEALEEIGGNFDVVVNIQGDEPFIQKSQIETVMACFNDVGT 119
Query: 169 AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ----FPYLLH 224
+ + E+A +PN K ++DN YA+YF+R L PY + GK + +P+L H
Sbjct: 120 QIATLGKPFATIEEAKNPNSPKIILDNRNYAMYFTRALAPYIR-GKEESEWLSAYPFLKH 178
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEK 284
+G+ +Y ++ L L + L+L E LEQL+ L+NG+K+KV D E G+D PED+E+
Sbjct: 179 IGLYAYRTDVLDKITKLPQSSLELAEGLEQLRWLQNGFKIKVGLTDVETVGIDTPEDLER 238
Query: 285 IESFMRERN 293
E F+ E+N
Sbjct: 239 AELFLAEQN 247
>gi|238019684|ref|ZP_04600110.1| hypothetical protein VEIDISOL_01558 [Veillonella dispar ATCC 17748]
gi|237863725|gb|EEP65015.1| hypothetical protein VEIDISOL_01558 [Veillonella dispar ATCC 17748]
Length = 243
Score = 191 bits (484), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 95/239 (39%), Positives = 143/239 (59%), Gaps = 4/239 (1%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ S+R GKPL +I GKPMI+R + R AT + +VATDD+++ Q FG
Sbjct: 6 VIPARYGSTRLPGKPLADIAGKPMIERVYARVSQATKTECTIVATDDDRVYSAVQNFGGA 65
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFS 172
V+MT + GT+R E D+++N+QGDEP+IEP++ID + + + P+ +
Sbjct: 66 VMMTDPNHPTGTDRLAEVASHY-TDLDVIINVQGDEPMIEPKLIDDLAQLFEEDPNLQMA 124
Query: 173 TAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDS 232
T T L ++ +P+ VK +++N A+YFSR LIPY + V L H+GI +Y
Sbjct: 125 TVATPLLEDEYDEPSAVKVILNNRNDAMYFSRSLIPYPRHDFVRAP---LKHIGIYAYRR 181
Query: 233 NFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFMRE 291
+FL Y + PTP + E LEQL+ LENGY ++VI D GVD PED+ ++ + +
Sbjct: 182 DFLLNYAKMEPTPAEQTESLEQLRALENGYTIRVILTDKRFIGVDTPEDLARVNAIYEQ 240
>gi|294828350|ref|NP_713753.2| 3-deoxy-manno-octulosonate cytidylyltransferase [Leptospira
interrogans serovar Lai str. 56601]
gi|386075307|ref|YP_005989627.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Leptospira
interrogans serovar Lai str. IPAV]
gi|417766590|ref|ZP_12414541.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
interrogans serovar Bulgarica str. Mallika]
gi|417776005|ref|ZP_12423849.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
interrogans str. 2002000621]
gi|418666840|ref|ZP_13228259.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
interrogans serovar Pyrogenes str. 2006006960]
gi|418690643|ref|ZP_13251751.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
interrogans str. FPW2026]
gi|418700548|ref|ZP_13261490.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
interrogans serovar Bataviae str. L1111]
gi|418712706|ref|ZP_13273438.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
interrogans str. UI 08452]
gi|421086438|ref|ZP_15547287.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
santarosai str. HAI1594]
gi|421101071|ref|ZP_15561685.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
interrogans serovar Icterohaemorrhagiae str. Verdun LP]
gi|421121280|ref|ZP_15581577.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
interrogans str. Brem 329]
gi|306526221|sp|Q8F0C3.2|KDSB_LEPIN RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|293386202|gb|AAN50771.2| 3-deoxy-manno-octulosonate cytidylyltransferase [Leptospira
interrogans serovar Lai str. 56601]
gi|353459099|gb|AER03644.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Leptospira
interrogans serovar Lai str. IPAV]
gi|400350985|gb|EJP03233.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
interrogans serovar Bulgarica str. Mallika]
gi|400360143|gb|EJP16123.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
interrogans str. FPW2026]
gi|410345714|gb|EKO96784.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
interrogans str. Brem 329]
gi|410368867|gb|EKP24241.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
interrogans serovar Icterohaemorrhagiae str. Verdun LP]
gi|410430937|gb|EKP75299.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
santarosai str. HAI1594]
gi|410574209|gb|EKQ37247.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
interrogans str. 2002000621]
gi|410757621|gb|EKR19232.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
interrogans serovar Pyrogenes str. 2006006960]
gi|410760449|gb|EKR26645.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
interrogans serovar Bataviae str. L1111]
gi|410790784|gb|EKR84473.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
interrogans str. UI 08452]
gi|455791185|gb|EMF43011.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
interrogans serovar Lora str. TE 1992]
gi|456823265|gb|EMF71735.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
interrogans serovar Canicola str. LT1962]
Length = 247
Score = 190 bits (483), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 109/249 (43%), Positives = 145/249 (58%), Gaps = 7/249 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+++G+IPAR+ASSRF GKPL I K MI+ T+ + ++ L LVVATDD +I E Q+
Sbjct: 3 KILGVIPARYASSRFPGKPLAKIGDKTMIEWTYRNASRSSVLSELVVATDDVRIHEVVQK 62
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG +MTS +GT+R E + +Y I+VNIQGDEP IEPE+IDGV + P+
Sbjct: 63 FGGRSVMTSSDHPSGTDRIIEVANQF-SEYSIIVNIQGDEPGIEPELIDGVASLKASHPE 121
Query: 169 AVFST-AVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
ST AV L A D NRVK ++D +G AIYFSR LIP + P HLGI
Sbjct: 122 WAMSTAAVPLLDFSHAIDFNRVKVIIDRNGKAIYFSRSLIP----SQFKTTVPLYRHLGI 177
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVE-KIE 286
YD +FL Y L + L+ E LEQL+ +E GY + + VD P D+E IE
Sbjct: 178 YGYDRDFLLQYNSLPKSNLEESESLEQLRAIEAGYGIGIYLSKEAGLSVDTPADLEIVIE 237
Query: 287 SFMRERNLS 295
F + + +S
Sbjct: 238 DFKKRKWIS 246
>gi|265753554|ref|ZP_06088909.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Bacteroides sp.
3_1_33FAA]
gi|345515482|ref|ZP_08794984.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bacteroides dorei
5_1_36/D4]
gi|229436116|gb|EEO46193.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bacteroides dorei
5_1_36/D4]
gi|263235268|gb|EEZ20792.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Bacteroides sp.
3_1_33FAA]
Length = 252
Score = 190 bits (483), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 102/251 (40%), Positives = 154/251 (61%), Gaps = 10/251 (3%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR+AS+RF KPL + GKP+IQR +E ++A LD VATDDE+I +
Sbjct: 2 KFIGIIPARYASTRFPAKPLAILGGKPVIQRVYE--QVAGILDEAYVATDDERIESAVKA 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG V+MTS ++GT+RC EA K+ + YD+VVNIQGDEP I+ ++ V + +
Sbjct: 60 FGGKVVMTSVHHKSGTDRCYEAYTKVGQGYDVVVNIQGDEPFIQRSQLEAVKACFEDSAT 119
Query: 169 AVFSTAVTSLKPEDAFDP----NRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF---PY 221
+ +T V PED F+ N K VV+ + A+YFSR +IP+ ++ + Y
Sbjct: 120 QI-ATLVKPFTPEDGFEALENVNSPKVVVNKNMNALYFSRSVIPFQRNAEKEGWLKGHTY 178
Query: 222 LLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPED 281
H+G+ +Y ++ LK L + L+L E LEQL+ LENGY +KV + E G+D P+D
Sbjct: 179 YKHIGLYAYRADVLKEITSLPQSSLELAESLEQLRWLENGYTIKVGISEVETIGIDTPQD 238
Query: 282 VEKIESFMRER 292
+ + E+F+++R
Sbjct: 239 LARAEAFLKQR 249
>gi|317502644|ref|ZP_07960764.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Prevotella
salivae DSM 15606]
gi|315666263|gb|EFV05810.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Prevotella
salivae DSM 15606]
Length = 247
Score = 190 bits (483), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 103/249 (41%), Positives = 148/249 (59%), Gaps = 9/249 (3%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +G+IPAR+ SSRF GKPL + GKP+IQ +E++ LD + VATDDE+I
Sbjct: 2 KFIGLIPARYGSSRFPGKPLALLAGKPVIQHVYEQAN--KVLDAVFVATDDERIYNKVLA 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG +MTS +GT+R EA +K+ +D+VVNIQGDEP IE I+ +
Sbjct: 60 FGGKAVMTSTEHHSGTDRIEEAFEKIGGDFDVVVNIQGDEPFIEQSQIETLCHCFDDDHT 119
Query: 169 AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ-----FPYLL 223
+ + E +PN K VVDN GYA+YFSR +IP+ + V+ Q +P+L
Sbjct: 120 QIATLGKPFADIEAVENPNSPKIVVDNRGYAMYFSRSIIPFVRG--VDKQNWLENYPFLK 177
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVE 283
HLGI +Y + L+ L + L+L E LEQL+ L+NGY++KV + E G+D PED++
Sbjct: 178 HLGIYAYRKDILREITKLPQSSLELAESLEQLRWLQNGYRVKVGITNVETVGIDTPEDLQ 237
Query: 284 KIESFMRER 292
+ E F+R R
Sbjct: 238 RAEDFIRNR 246
>gi|45656523|ref|YP_000609.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Leptospira
interrogans serovar Copenhageni str. Fiocruz L1-130]
gi|417763301|ref|ZP_12411280.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
interrogans str. 2002000624]
gi|417784273|ref|ZP_12431981.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
interrogans str. C10069]
gi|418672150|ref|ZP_13233492.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
interrogans str. 2002000623]
gi|418708966|ref|ZP_13269766.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
interrogans serovar Grippotyphosa str. UI 08368]
gi|81568617|sp|Q72UN2.1|KDSB_LEPIC RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|45599758|gb|AAS69246.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Leptospira
interrogans serovar Copenhageni str. Fiocruz L1-130]
gi|409940778|gb|EKN86416.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
interrogans str. 2002000624]
gi|409952533|gb|EKO07044.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
interrogans str. C10069]
gi|410580754|gb|EKQ48573.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
interrogans str. 2002000623]
gi|410770896|gb|EKR46109.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
interrogans serovar Grippotyphosa str. UI 08368]
Length = 248
Score = 190 bits (483), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 109/249 (43%), Positives = 145/249 (58%), Gaps = 7/249 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+++G+IPAR+ASSRF GKPL I K MI+ T+ + ++ L LVVATDD +I E Q+
Sbjct: 4 KILGVIPARYASSRFPGKPLAKIGDKTMIEWTYRNASRSSVLSELVVATDDVRIHEVVQK 63
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG +MTS +GT+R E + +Y I+VNIQGDEP IEPE+IDGV + P+
Sbjct: 64 FGGRSVMTSSDHPSGTDRIIEVANQF-SEYSIIVNIQGDEPGIEPELIDGVASLKASHPE 122
Query: 169 AVFST-AVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
ST AV L A D NRVK ++D +G AIYFSR LIP + P HLGI
Sbjct: 123 WAMSTAAVPLLDFSHAIDFNRVKVIIDRNGKAIYFSRSLIP----SQFKTTVPLYRHLGI 178
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVE-KIE 286
YD +FL Y L + L+ E LEQL+ +E GY + + VD P D+E IE
Sbjct: 179 YGYDRDFLLQYNSLPKSNLEESESLEQLRAIEAGYGIGIYLSKEAGLSVDTPADLEIVIE 238
Query: 287 SFMRERNLS 295
F + + +S
Sbjct: 239 DFKKRKWIS 247
>gi|456863081|gb|EMF81571.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
weilii serovar Topaz str. LT2116]
Length = 246
Score = 190 bits (483), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 109/246 (44%), Positives = 143/246 (58%), Gaps = 7/246 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+++G+IPAR+ASSRF GKPL I K MI+ T+ + ++TL LVVATDDE+I E Q
Sbjct: 3 KILGVIPARYASSRFPGKPLAKIGDKTMIEWTYFNASRSSTLSKLVVATDDERIHEVVQG 62
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG + +MT +GT+R E + +Y +VVNIQGDEP IEPE+IDGV + P+
Sbjct: 63 FGGNSVMTRADHISGTDRIIEVANRF-PEYSVVVNIQGDEPGIEPELIDGVASLKASHPE 121
Query: 169 AVFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
STA L DPNRVK ++D +G AIYFSR LIP + P HLGI
Sbjct: 122 WEMSTAAVPLIDFSHGEDPNRVKVIIDRNGKAIYFSRSLIP----SQFKKTVPLYRHLGI 177
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVE-KIE 286
YD +FL Y L + L+ E LEQL+ +E GY + V VD P D+E IE
Sbjct: 178 YGYDRDFLLKYNSLPKSNLEESESLEQLRAIEAGYGIGVYLAREAGLSVDTPADLEIVIE 237
Query: 287 SFMRER 292
F + +
Sbjct: 238 DFKKRK 243
>gi|417769242|ref|ZP_12417159.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
interrogans serovar Pomona str. Pomona]
gi|418681938|ref|ZP_13243159.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
interrogans serovar Pomona str. Kennewicki LC82-25]
gi|400326305|gb|EJO78573.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
interrogans serovar Pomona str. Kennewicki LC82-25]
gi|409948688|gb|EKN98675.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
interrogans serovar Pomona str. Pomona]
gi|455667538|gb|EMF32848.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
interrogans serovar Pomona str. Fox 32256]
Length = 247
Score = 190 bits (483), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 109/249 (43%), Positives = 145/249 (58%), Gaps = 7/249 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+++G+IPAR+ASSRF GKPL I K MI+ T+ + ++ L LVVATDD +I E Q+
Sbjct: 3 KILGVIPARYASSRFPGKPLAKIGDKTMIEWTYRNASRSSVLSELVVATDDIRIHEVVQK 62
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG +MTS +GT+R E + +Y I+VNIQGDEP IEPE+IDGV + P+
Sbjct: 63 FGGRSVMTSSDHPSGTDRIIEVANQF-SEYSIIVNIQGDEPGIEPELIDGVANLKASHPE 121
Query: 169 AVFST-AVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
ST AV L A D NRVK ++D +G AIYFSR LIP + P HLGI
Sbjct: 122 WAMSTAAVPLLDFSHAIDLNRVKVIIDRNGKAIYFSRSLIP----SQFKTTVPLYRHLGI 177
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVE-KIE 286
YD +FL Y L + L+ E LEQL+ +E GY + + VD P D+E IE
Sbjct: 178 YGYDRDFLLQYNSLPKSNLEESESLEQLRAIEAGYGIGIYLSKEAGLSVDTPADLEIVIE 237
Query: 287 SFMRERNLS 295
F + + +S
Sbjct: 238 DFKKRKWIS 246
>gi|119357871|ref|YP_912515.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlorobium
phaeobacteroides DSM 266]
gi|226724668|sp|A1BI64.1|KDSB_CHLPD RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|119355220|gb|ABL66091.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Chlorobium
phaeobacteroides DSM 266]
Length = 247
Score = 190 bits (483), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 106/247 (42%), Positives = 154/247 (62%), Gaps = 11/247 (4%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ V +IPAR SSR E K L ++ G+P+I RTW ++ + D +VVATD+++IA Q
Sbjct: 2 KAVILIPARLDSSRLEKKMLADLQGEPLIVRTWRQALKSRLADRVVVATDNDEIASVLQA 61
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKAL--QAA 166
+GA+V+MTS R GTER EA + +E DI VN+QGDEPLI PE ID ++ +
Sbjct: 62 YGAEVVMTSPHARCGTERIAEAAKSIEG--DIYVNLQGDEPLISPENIDLALEPFFTETP 119
Query: 167 PDAVFSTAVTSLKPED---AFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLL 223
PD ST V L PED D N VK V+DN GYA+YFSR IPY + +++
Sbjct: 120 PDC--STLVFPLLPEDFRQLEDINTVKVVMDNAGYALYFSRSPIPYQR--QISTSTECYR 175
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVE 283
H+G+ ++ ++ L + L P+ L+L E LEQL++LENGY+++ +K +A GV+ ED+E
Sbjct: 176 HIGLYAFRADVLHAFASLAPSMLELAESLEQLRLLENGYRIRCVKTTRDAPGVNTYEDLE 235
Query: 284 KIESFMR 290
+ +R
Sbjct: 236 LVRQLLR 242
>gi|418465704|ref|ZP_13036637.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Aggregatibacter
actinomycetemcomitans RhAA1]
gi|359755739|gb|EHK89902.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Aggregatibacter
actinomycetemcomitans RhAA1]
Length = 257
Score = 190 bits (482), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 108/250 (43%), Positives = 153/250 (61%), Gaps = 11/250 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR+AS+R GKPL +I GKPMIQ +E++K + D +++ATD+E +A + FGA+
Sbjct: 7 IIPARYASNRLPGKPLADIAGKPMIQHVFEQAK-QSGADRVIIATDNELVAAAAENFGAE 65
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MT+ES +GTER E ++KL D I+VNIQGDEPLI P I+ V + L P +
Sbjct: 66 VCMTAESHNSGTERLAEVVEKLALPDDEIIVNIQGDEPLIPPVIVKQVAENLAKYPVNMA 125
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS--------GKVNPQFPYLL 223
S AV E+ F+PN VK + D +GY +YFSR +IP+++ + YL
Sbjct: 126 SLAVKIDNAEELFNPNVVKVLTDKNGYVLYFSRAVIPWDRDQFAQMDDVATLRLNTEYLR 185
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDV 282
H+GI +Y + F+K Y PT L+ E LEQL+VL +G K+ V + A GVD ED+
Sbjct: 186 HIGIYAYRAGFIKQYVQWQPTALEHIEKLEQLRVLWHGEKIHVELAKAVPAVGVDTAEDL 245
Query: 283 EKIESFMRER 292
EK+ S + +
Sbjct: 246 EKVRSILEAK 255
>gi|282858878|ref|ZP_06268019.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Prevotella bivia
JCVIHMP010]
gi|424899219|ref|ZP_18322765.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Prevotella bivia
DSM 20514]
gi|282588339|gb|EFB93503.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Prevotella bivia
JCVIHMP010]
gi|388593433|gb|EIM33671.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Prevotella bivia
DSM 20514]
Length = 247
Score = 190 bits (482), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 101/249 (40%), Positives = 153/249 (61%), Gaps = 7/249 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR+ASSRF GKPL + GK +I+R + ++ LD + VATDDE+I + +
Sbjct: 2 KFIGIIPARYASSRFPGKPLAILGGKMVIERVYR--QVEQVLDAVYVATDDERIYKAVES 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG +MTS ++GT+R EA+ K+ +D+ +NIQGDEP I+ I+ V+ + P
Sbjct: 60 FGGKALMTSTEHKSGTDRICEAISKIGGNFDVAINIQGDEPFIQTSQIETVMNCF-SDPQ 118
Query: 169 AVFSTAVTSLKPEDAF-DPNRVKCVVDNHGYAIYFSRGLIPY---NKSGKVNPQFPYLLH 224
+T + +A +PN K V+DN+ YA+YFSR +IP+ + K +P+L H
Sbjct: 119 TQIATLGKRFESIEAIQNPNSPKIVLDNNNYAMYFSRSVIPFIRGKEQTKWLDSYPFLKH 178
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEK 284
+G+ +Y + LK L + L+L E LEQL+ L+NGYK+KV E G+D PED++K
Sbjct: 179 IGLYAYRTEVLKEISRLPQSSLELAESLEQLRWLQNGYKIKVGLTASETIGIDTPEDLQK 238
Query: 285 IESFMRERN 293
E F++ RN
Sbjct: 239 AEEFLKSRN 247
>gi|237709901|ref|ZP_04540382.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bacteroides sp.
9_1_42FAA]
gi|229455994|gb|EEO61715.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bacteroides sp.
9_1_42FAA]
Length = 252
Score = 190 bits (482), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 101/251 (40%), Positives = 154/251 (61%), Gaps = 10/251 (3%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR+AS+RF KPL + GKP+IQR +E ++A LD VATDDE+I +
Sbjct: 2 KFIGIIPARYASTRFPAKPLAILGGKPVIQRVYE--QVAGILDEAYVATDDERIESAVKA 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG V+MTS ++GT+RC EA K+ + YD+VVNIQGDEP I+ ++ V + +
Sbjct: 60 FGGKVVMTSVHHKSGTDRCYEAYTKVGQGYDVVVNIQGDEPFIQRSQLEAVKACFEDSAT 119
Query: 169 AVFSTAVTSLKPEDAFDP----NRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF---PY 221
+ +T V PED F+ N K V++ + A+YFSR +IP+ ++ + Y
Sbjct: 120 QI-ATLVKPFTPEDGFEALENVNSPKVVINKNMNALYFSRSVIPFQRNAEKEGWLKGHTY 178
Query: 222 LLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPED 281
H+G+ +Y ++ LK L + L+L E LEQL+ LENGY +KV + E G+D P+D
Sbjct: 179 YKHIGLYAYRADVLKEITSLPQSSLELAESLEQLRWLENGYTIKVGISEVETIGIDTPQD 238
Query: 282 VEKIESFMRER 292
+ + E+F+++R
Sbjct: 239 LARAEAFLKQR 249
>gi|424825229|ref|ZP_18250216.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydophila
abortus LLG]
gi|333410328|gb|EGK69315.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydophila
abortus LLG]
Length = 254
Score = 190 bits (482), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 100/247 (40%), Positives = 149/247 (60%), Gaps = 5/247 (2%)
Query: 44 KNFRSRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIA 103
+ F S+ VG++PAR+ S RF GKPL ILGK +IQRT+E + TLD +VVATDD++I
Sbjct: 4 QTFISKKVGVLPARWGSVRFPGKPLAMILGKSLIQRTYENIIQSETLDKVVVATDDQRIM 63
Query: 104 ECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKAL 163
+ FG +M S C NGTER E + + + +I+VNIQGDEP + ++D +V+ L
Sbjct: 64 DHVLDFGGACVMMSPECANGTERMAETVSRYFPEAEIMVNIQGDEPCLRHTVVDALVRKL 123
Query: 164 QAAPDAVFSTAVT-SLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYL 222
+ P+ T V + + +VKCV D +G A+YFSR IP+ + + P
Sbjct: 124 EEHPEIQMVTPVAQTTDSHEILTNQKVKCVFDKNGKALYFSRSPIPH----ILKKETPIY 179
Query: 223 LHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDV 282
LH+G+ ++ + L Y P+PL EDLEQL+VLE+G + V V+ ++ VD PED+
Sbjct: 180 LHIGVYAFRRSALFSYIASAPSPLSQAEDLEQLRVLEHGGSIHVCVVEAKSPSVDYPEDI 239
Query: 283 EKIESFM 289
K+E ++
Sbjct: 240 SKVEEYL 246
>gi|418706631|ref|ZP_13267474.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
interrogans serovar Hebdomadis str. R499]
gi|418729225|ref|ZP_13287780.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
interrogans str. UI 12758]
gi|421115240|ref|ZP_15575648.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
interrogans serovar Canicola str. Fiocruz LV133]
gi|410013018|gb|EKO71101.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
interrogans serovar Canicola str. Fiocruz LV133]
gi|410763726|gb|EKR34450.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
interrogans serovar Hebdomadis str. R499]
gi|410775976|gb|EKR55965.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
interrogans str. UI 12758]
Length = 247
Score = 189 bits (481), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 109/249 (43%), Positives = 145/249 (58%), Gaps = 7/249 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+++G+IPAR+ASSRF GKPL I K MI+ T+ + ++ L LVVATDD +I E Q+
Sbjct: 3 KILGVIPARYASSRFPGKPLAKIGDKTMIEWTYRNASRSSVLSELVVATDDIRIHEVVQK 62
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG +MTS +GT+R E + +Y I+VNIQGDEP IEPE+IDGV + P+
Sbjct: 63 FGGRSVMTSSDHPSGTDRIIEVANQF-SEYSIIVNIQGDEPGIEPELIDGVANLKASHPE 121
Query: 169 AVFST-AVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
ST AV L A D NRVK ++D +G AIYFSR LIP + P HLGI
Sbjct: 122 WAMSTAAVPLLDFSHAIDLNRVKVIIDRNGKAIYFSRSLIP----SQFKTTVPLYRHLGI 177
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVE-KIE 286
YD +FL Y L + L+ E LEQL+ +E GY + + VD P D+E IE
Sbjct: 178 YGYDRDFLLQYNSLPKSNLEESESLEQLRAIEAGYGIGIYLSKEVGLSVDTPADLEIVIE 237
Query: 287 SFMRERNLS 295
F + + +S
Sbjct: 238 DFKKRKWIS 246
>gi|388566273|ref|ZP_10152728.1| 3-deoxy-manno-octulosonate cytidylyltransferase, partial
[Hydrogenophaga sp. PBC]
gi|388266513|gb|EIK92048.1| 3-deoxy-manno-octulosonate cytidylyltransferase, partial
[Hydrogenophaga sp. PBC]
Length = 264
Score = 189 bits (481), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 142/244 (58%), Gaps = 7/244 (2%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR ASSR KPL +I G PM+ R +R+ L+ VVA DDE+I + C Q G
Sbjct: 20 LIPARLASSRLPDKPLADIAGLPMVVRVAQRAALSGA-TRCVVAADDERILQACAQHGVA 78
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
+ T +G++R EA L D IVVN+QGDEPLIEP +ID V LQA PD
Sbjct: 79 ALATRADHPSGSDRLAEACTALGLADDQIVVNVQGDEPLIEPALIDAVAAELQARPDCAM 138
Query: 172 STAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPY---LLHLGI 227
STA ++ + ED DPN VK V D G A YFSR IP+ + G + P L H+GI
Sbjct: 139 STAAHAIHRREDWLDPNVVKVVTDARGTASYFSRAPIPWWRDGMARDELPSPAPLRHIGI 198
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKIE 286
+Y + FL+ +P L P P + E LEQL+VL +G ++ V + GVD P+D+E++
Sbjct: 199 YAYRAGFLRRFPTLPPAPTERLESLEQLRVLWHGERIAVHLTALAPGPGVDTPQDLERVR 258
Query: 287 SFMR 290
+ +R
Sbjct: 259 ALIR 262
>gi|442318154|ref|YP_007358175.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Myxococcus
stipitatus DSM 14675]
gi|441485796|gb|AGC42491.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Myxococcus
stipitatus DSM 14675]
Length = 247
Score = 189 bits (481), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 100/247 (40%), Positives = 141/247 (57%), Gaps = 4/247 (1%)
Query: 48 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQ 107
SR V +IPAR AS+RF GKPL I G+PM++ W R + A D + VATDDE+I +
Sbjct: 4 SRTVAVIPARHASTRFPGKPLALIAGRPMVEHVWRRCQEAGVFDEICVATDDERIRATVE 63
Query: 108 QFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
FG +MTS C GT+R E + + D+ VN+QGDEPL++PE + + L A P
Sbjct: 64 GFGGRAVMTSPHCATGTDRVAE-VARARTDVDVWVNVQGDEPLVDPEALKALA-GLFADP 121
Query: 168 DAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
T V L+ ++A P+ VK V+ + A+YFSR L+P+ + + P H+G+
Sbjct: 122 TVRMGTLVRPLETDEAESPHVVKAVLALNSDALYFSRSLVPHAREPAA--RVPRWGHIGL 179
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
Y L L PTPL+ E LEQL+ LENG ++ +V VD PEDV K+E+
Sbjct: 180 YGYRREVLLELAELAPTPLEETEKLEQLRALENGIAIRCARVSWRTVAVDIPEDVAKVEA 239
Query: 288 FMRERNL 294
MR++ L
Sbjct: 240 VMRQKGL 246
>gi|456987647|gb|EMG22911.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
interrogans serovar Copenhageni str. LT2050]
Length = 256
Score = 189 bits (481), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 109/248 (43%), Positives = 142/248 (57%), Gaps = 7/248 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+++G+IPAR+ASSRF GKPL I K MI+ T+ + ++ L LVVATDD +I E Q+
Sbjct: 4 KILGVIPARYASSRFPGKPLAKIGDKTMIEWTYRNASRSSVLSELVVATDDVRIHEVVQK 63
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG +MTS +GT+R E + +Y I+VNIQGDEP IEPE+IDGV + P+
Sbjct: 64 FGGRSVMTSSDHPSGTDRIIEVANQF-SEYSIIVNIQGDEPGIEPELIDGVASLKASHPE 122
Query: 169 AVFSTA-VTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
STA V L A D NRVK ++D +G AIYFSR LIP + P HLGI
Sbjct: 123 WAMSTAAVPLLDFSHAIDFNRVKVIIDRNGKAIYFSRSLIP----SQFKTTVPLYRHLGI 178
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVE-KIE 286
YD +FL Y L + L+ E LEQL+ +E GY + + VD P D+E IE
Sbjct: 179 YGYDRDFLLQYNSLPKSNLEESESLEQLRAIEAGYGIGIYLSKEAGLSVDTPADLEIVIE 238
Query: 287 SFMRERNL 294
F E
Sbjct: 239 DFKNENGF 246
>gi|269797605|ref|YP_003311505.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Veillonella
parvula DSM 2008]
gi|294793357|ref|ZP_06758502.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Veillonella sp.
6_1_27]
gi|417000988|ref|ZP_11940982.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Veillonella
parvula ACS-068-V-Sch12]
gi|269094234|gb|ACZ24225.1| 3-deoxy-D-manno-octulosonatecytidylyltransferase [Veillonella
parvula DSM 2008]
gi|294455788|gb|EFG24153.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Veillonella sp.
6_1_27]
gi|333975862|gb|EGL76739.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Veillonella
parvula ACS-068-V-Sch12]
Length = 243
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 97/239 (40%), Positives = 141/239 (58%), Gaps = 4/239 (1%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ S+R GKPL +I GKPMI+R + R AT +VATDD ++ QQFG
Sbjct: 6 VIPARYGSTRLPGKPLADIAGKPMIERVYARVSQATKTVCTIVATDDNRVYSAVQQFGGT 65
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFS 172
V+MT + GT+R E D+V+N+QGDEP+I+P +ID + + + P+ +
Sbjct: 66 VMMTDPNHPTGTDRLAEVASHY-TDLDVVINVQGDEPMIDPNLIDDLARLFEEDPNLQMA 124
Query: 173 TAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDS 232
T T L E+ +P+ VK +++N A+YFSR LIPY + V P L H+GI +Y
Sbjct: 125 TVATPLLEEEYEEPSAVKVILNNRNDAMYFSRSLIPYPRHDFVRPP---LKHIGIYAYRR 181
Query: 233 NFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFMRE 291
FL Y + PTP + E LEQL+ LENGY ++VI + GVD PED+ ++ + +
Sbjct: 182 EFLLNYAKMEPTPAERTESLEQLRALENGYTIRVILTNKRFIGVDTPEDLARVNAIYEQ 240
>gi|373956754|ref|ZP_09616714.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Mucilaginibacter
paludis DSM 18603]
gi|373893354|gb|EHQ29251.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Mucilaginibacter
paludis DSM 18603]
Length = 247
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 99/242 (40%), Positives = 153/242 (63%), Gaps = 8/242 (3%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+++GIIPAR+AS+RF GKPLV+I GK MIQR +E++K TL ++VATDDE+I Q+
Sbjct: 2 KILGIIPARYASTRFPGKPLVDIGGKTMIQRVYEQAKKCATLSEVIVATDDERIFSHVQK 61
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG +MTS++ ++GT+RC E + K +Y++++NIQGDEP I+P+ ID V
Sbjct: 62 FGGVAVMTSDTHQSGTDRCAE-VAKQHPEYEVIINIQGDEPFIDPQQIDKVAGCFTETGT 120
Query: 169 AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ-----FPYLL 223
+ + L E+ ++ + K +++ AIYFSR +P+ + + PQ + Y
Sbjct: 121 QLATLVKKVLTTEELYNFSSPKVILNKQWEAIYFSRSPLPHVRGRE--PQQWLYYYTYYK 178
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVE 283
H+GI Y S+ L+ L + L+ E LEQL+ +ENGY++KV + D E + +D PED+E
Sbjct: 179 HIGIYGYKSDILQQVTLLPVSSLEKAESLEQLRWIENGYRIKVAETDLETYAIDTPEDLE 238
Query: 284 KI 285
KI
Sbjct: 239 KI 240
>gi|282850052|ref|ZP_06259434.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Veillonella
parvula ATCC 17745]
gi|294795176|ref|ZP_06760310.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Veillonella sp.
3_1_44]
gi|282580241|gb|EFB85642.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Veillonella
parvula ATCC 17745]
gi|294453968|gb|EFG22343.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Veillonella sp.
3_1_44]
Length = 243
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 97/239 (40%), Positives = 141/239 (58%), Gaps = 4/239 (1%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ S+R GKPL +I GKPMI+R + R AT +VATDD ++ QQFG
Sbjct: 6 VIPARYGSTRLPGKPLADIAGKPMIERVYARVSQATKTVCTIVATDDNRVYSAVQQFGGT 65
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFS 172
V+MT + GT+R E D+V+N+QGDEP+I+P +ID + + + P+ +
Sbjct: 66 VMMTDPNHPTGTDRLAEVASHY-TDLDVVINVQGDEPMIDPNLIDDLARLFEEDPNLQMA 124
Query: 173 TAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDS 232
T T L E+ +P+ VK +++N A+YFSR LIPY + V P L H+GI +Y
Sbjct: 125 TVATPLLEEEYEEPSAVKVILNNRNDAMYFSRSLIPYPRHDFVRPP---LKHIGIYAYRR 181
Query: 233 NFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFMRE 291
FL Y + PTP + E LEQL+ LENGY ++VI + GVD PED+ ++ + +
Sbjct: 182 EFLLNYAKMEPTPAEQTESLEQLRALENGYTIRVILTNKRFIGVDTPEDLARVNAIYEQ 240
>gi|340354021|ref|ZP_08676815.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Prevotella pallens
ATCC 700821]
gi|339607759|gb|EGQ12686.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Prevotella pallens
ATCC 700821]
Length = 252
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 97/251 (38%), Positives = 157/251 (62%), Gaps = 5/251 (1%)
Query: 46 FRSRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAEC 105
+ + +GIIPAR+ASSRF GKPL + GK ++QR E +++T LD + VATDD++I
Sbjct: 1 MQMKAIGIIPARYASSRFPGKPLAILGGKYVLQRVVE--QVSTVLDDVYVATDDKRIYNT 58
Query: 106 CQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQA 165
GA+ +MTS ++GT+R EAL+++ +D+VVNIQGDEP I+ I+ V+ +
Sbjct: 59 ITSLGANAVMTSTDHQSGTDRIAEALEQIGGNFDVVVNIQGDEPFIQRSQIETVLACFKD 118
Query: 166 APDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVN---PQFPYL 222
+ + E+A +PN K ++DN YA+YF+R L+PY + + + +P+L
Sbjct: 119 VGTQIATLGKPFATIEEAKNPNSPKIIIDNRNYAMYFTRALVPYIREKEESEWIEAYPFL 178
Query: 223 LHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDV 282
H+G+ +Y ++ L L + L+L E LEQL+ L+NG+K+KV + E G+D PED+
Sbjct: 179 KHIGLYAYRTDVLHQITKLPQSSLELAEGLEQLRWLQNGFKIKVGLTNVETVGIDTPEDM 238
Query: 283 EKIESFMRERN 293
++ E F+ E++
Sbjct: 239 QRAEQFLLEQS 249
>gi|400756566|ref|NP_952945.2| 3-deoxy-manno-octulosonate cytidylyltransferase [Geobacter
sulfurreducens PCA]
gi|409912423|ref|YP_006890888.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Geobacter
sulfurreducens KN400]
gi|226724708|sp|Q74BY2.2|KDSB_GEOSL RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|298506011|gb|ADI84734.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Geobacter
sulfurreducens KN400]
gi|399107877|gb|AAR35272.2| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Geobacter
sulfurreducens PCA]
Length = 250
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 100/245 (40%), Positives = 144/245 (58%), Gaps = 11/245 (4%)
Query: 50 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQF 109
+ IIPARFAS+RF GK L +I GKPM+Q +ER+ A + +VVATDD++IA+ + F
Sbjct: 3 ITAIIPARFASTRFPGKALADIAGKPMVQHVYERTARARLVSEVVVATDDDRIAQAVRGF 62
Query: 110 GADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
G V MTS GT+R E ++ +I+VN+QGDEPLIEP +ID + L P
Sbjct: 63 GGRVEMTSRDHETGTDRLAEVASRI--GAEIIVNVQGDEPLIEPAMIDEAIAPLAENPAV 120
Query: 170 VFSTAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS--------GKVNPQFP 220
T + ++ D PN VK V D GYA+YFSR +P+ + + +
Sbjct: 121 RMGTLKSRIRTLHDFLSPNVVKVVTDLEGYALYFSRSPLPFFRDKWNDLKDESFASGRLL 180
Query: 221 YLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPE 280
H+G+ Y +FL + + PT L+L E LEQL+ LENG +++V++ HE+ GVD P
Sbjct: 181 CYKHVGLYVYRRDFLMEFAKMPPTALELAEKLEQLRALENGCRIRVVETAHESIGVDTPN 240
Query: 281 DVEKI 285
D+EK+
Sbjct: 241 DLEKV 245
>gi|392411253|ref|YP_006447860.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Desulfomonile
tiedjei DSM 6799]
gi|390624389|gb|AFM25596.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Desulfomonile
tiedjei DSM 6799]
Length = 251
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 101/245 (41%), Positives = 149/245 (60%), Gaps = 4/245 (1%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+++G IPAR SSRF GKPL +ILGKPMI R ER+ + LD + VAT+ I +
Sbjct: 7 KIIGFIPARAESSRFPGKPLADILGKPMIVRVLERAMTSGILDAVYVATNSHDIVSAVEA 66
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAP 167
G ++TS +G++R EA + L+ + + +VVNIQGD+PL +P +I V L P
Sbjct: 67 SGGKAVLTSNQHPSGSDRIAEAARILQLQDNAVVVNIQGDQPLFDPIMIKEVTAPLVTDP 126
Query: 168 DAVFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLG 226
ST + + + E+ PN VK V+D HG+A+YFSR IPY K + P Y H G
Sbjct: 127 SIPMSTLIYRIVRDEEIHHPNAVKTVMDVHGFALYFSRATIPYYKGSAILPV--YYKHHG 184
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIE 286
I +Y +NFL+++ L T L+ E LEQL+ LE+G+++KV+ D ++ VD PED+E++
Sbjct: 185 IYAYRNNFLQVFANLPQTILEKSERLEQLRALEHGFRIKVVITDMDSIEVDTPEDLERVR 244
Query: 287 SFMRE 291
R+
Sbjct: 245 ETYRK 249
>gi|365118118|ref|ZP_09336918.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Tannerella sp.
6_1_58FAA_CT1]
gi|363651012|gb|EHL90095.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Tannerella sp.
6_1_58FAA_CT1]
Length = 246
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 97/248 (39%), Positives = 153/248 (61%), Gaps = 10/248 (4%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR+AS+RF GKPL ++ GK MIQR +E+ K T LD + VATDD +I +
Sbjct: 2 KFIGIIPARYASTRFPGKPLADMKGKYMIQRVYEQVK--TVLDRVYVATDDRRIFDAVHS 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG V+MTSE+ ++GT+RC EA ++ + D+++NIQGDEP I+ I+ +++ ++
Sbjct: 60 FGGKVVMTSENHKSGTDRCFEAYSRIGEGEDVIINIQGDEPFIQTRQIEAIMECFESEGT 119
Query: 169 AVFSTAVTSLKPEDAFDP----NRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF---PY 221
+ +T V ED FD N K V++N A+YFSR +IPY ++ K + +
Sbjct: 120 QI-ATLVKPFTKEDGFDALFNSNSPKVVLNNRNEALYFSRSIIPYIRNYKYDTWLDHHTF 178
Query: 222 LLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPED 281
H+G+ +Y ++ L L + L++ E LEQL+ L+NGY++KV E G+D PED
Sbjct: 179 YKHIGMYAYRADVLSEITALPQSSLEIAESLEQLRWLQNGYRIKVGITTQETIGIDTPED 238
Query: 282 VEKIESFM 289
+E+ ++
Sbjct: 239 LERALKYL 246
>gi|291515866|emb|CBK65076.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Alistipes shahii
WAL 8301]
Length = 254
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 105/247 (42%), Positives = 149/247 (60%), Gaps = 10/247 (4%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
+ IIPAR+AS+RF GKPL + GKP+IQR +E ++A LD VVATDDE+I + + FG
Sbjct: 4 LAIIPARYASTRFPGKPLARLGGKPVIQRVYE--QVAGVLDDAVVATDDERIRDAVRAFG 61
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAV 170
V MTS R+GT+RC EA K ++YD+VVN+QGDEP I P ++ V + P
Sbjct: 62 GRVEMTSPDHRSGTDRCWEAYCKQGREYDVVVNVQGDEPFIRPSQLEAVKRCFD-DPATD 120
Query: 171 FSTAVTSLKPEDAF----DPNRVKCVVDNHGYAIYFSRGLIPYNKS---GKVNPQFPYLL 223
+T V D +PN K V+D AIYFSR +IPY + + + +
Sbjct: 121 IATLVKPFTKADGLAALENPNSPKVVLDAQSRAIYFSRSVIPYLRGVPREEWLARHTFYK 180
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVE 283
H+G+ ++ ++ L+ L +PL+L E LEQL+ LENGYK+ V + E G+D PED+E
Sbjct: 181 HIGLYAFRADVLRAVTALPQSPLELAESLEQLRWLENGYKIGVGISEVETIGIDTPEDLE 240
Query: 284 KIESFMR 290
K E F++
Sbjct: 241 KAERFLQ 247
>gi|359688617|ref|ZP_09258618.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Leptospira
licerasiae serovar Varillal str. MMD0835]
gi|418749059|ref|ZP_13305351.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
licerasiae str. MMD4847]
gi|418756377|ref|ZP_13312565.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
licerasiae serovar Varillal str. VAR 010]
gi|384116048|gb|EIE02305.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
licerasiae serovar Varillal str. VAR 010]
gi|404276128|gb|EJZ43442.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
licerasiae str. MMD4847]
Length = 247
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 105/248 (42%), Positives = 143/248 (57%), Gaps = 5/248 (2%)
Query: 47 RSRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECC 106
+ +++G+IPAR+ SSRF GKPL I PMI T++ S ++ L +VVATDDE+I +
Sbjct: 3 KPKILGVIPARYGSSRFPGKPLAKIGNLPMIAWTYKNSLKSSLLHDVVVATDDERILKVV 62
Query: 107 QQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAA 166
G +MTS +GT+R E K I++NIQGDEP IE E+IDGV K
Sbjct: 63 LDNGGKAVMTSADHPSGTDRIREVALKYPDS-GIIINIQGDEPGIESELIDGVAKLKLER 121
Query: 167 PDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLG 226
PD STA L+ ++ DPNRVK V+D +G A+YFSR IP + P HLG
Sbjct: 122 PDWAMSTAAVLLEEKEIHDPNRVKVVLDKNGKALYFSRSAIP----SQFKKTVPAYRHLG 177
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIE 286
I YD +FL YP L P+ L+ E LEQL+ +E G+ + V A VD PED+E +
Sbjct: 178 IYGYDRDFLLGYPELPPSALEESESLEQLRAMEAGHSIGVYIASRAALSVDTPEDLELVV 237
Query: 287 SFMRERNL 294
+++ L
Sbjct: 238 EDFKKKGL 245
>gi|456973017|gb|EMG13292.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
interrogans serovar Grippotyphosa str. LT2186]
Length = 274
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 109/248 (43%), Positives = 142/248 (57%), Gaps = 7/248 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+++G+IPAR+ASSRF GKPL I K MI+ T+ + ++ L LVVATDD +I E Q+
Sbjct: 3 KILGVIPARYASSRFPGKPLAKIGDKTMIEWTYRNASRSSVLSELVVATDDVRIHEVVQK 62
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG +MTS +GT+R E + +Y I+VNIQGDEP IEPE+IDGV + P+
Sbjct: 63 FGGRSVMTSSDHPSGTDRIIEVANQF-SEYSIIVNIQGDEPGIEPELIDGVASLKASHPE 121
Query: 169 AVFSTA-VTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
STA V L A D NRVK ++D +G AIYFSR LIP + P HLGI
Sbjct: 122 WAMSTAAVPLLDFSHAIDFNRVKVIIDRNGKAIYFSRSLIP----SQFKTTVPLYRHLGI 177
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVE-KIE 286
YD +FL Y L + L+ E LEQL+ +E GY + + VD P D+E IE
Sbjct: 178 YGYDRDFLLQYNSLPKSNLEESESLEQLRAIEAGYGIGIYLSKEAGLSVDTPADLEIVIE 237
Query: 287 SFMRERNL 294
F E
Sbjct: 238 DFKNENGF 245
>gi|421126677|ref|ZP_15586907.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
interrogans serovar Grippotyphosa str. 2006006986]
gi|421132991|ref|ZP_15593148.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
interrogans serovar Grippotyphosa str. Andaman]
gi|410022818|gb|EKO89586.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
interrogans serovar Grippotyphosa str. Andaman]
gi|410435902|gb|EKP85028.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
interrogans serovar Grippotyphosa str. 2006006986]
Length = 247
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 108/249 (43%), Positives = 145/249 (58%), Gaps = 7/249 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+++G+IPAR+ASSRF GKPL I K MI+ T+ + ++ L LVVATDD +I E Q+
Sbjct: 3 KILGVIPARYASSRFPGKPLAKIGDKTMIEWTYRNASRSSVLSELVVATDDIRIHEVVQK 62
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG +MTS +GT+R E + +Y I+VNIQGDEP IEPE+IDGV + P+
Sbjct: 63 FGGRSVMTSSDHPSGTDRIIEVANQF-SEYSIIVNIQGDEPGIEPELIDGVANLKASHPE 121
Query: 169 AVFST-AVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
ST AV L A D NRVK ++D +G AIYFSR LIP + P HLGI
Sbjct: 122 WAMSTAAVPLLDFSHAIDLNRVKVIIDRNGKAIYFSRSLIP----SQFKTTVPLYRHLGI 177
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKI-E 286
YD +FL Y L + L+ E LEQL+ +E GY + + VD P D+E + E
Sbjct: 178 YGYDRDFLLQYNSLPKSNLEESESLEQLRAIEAGYGIGIYLSKEVGLSVDTPADLEIVTE 237
Query: 287 SFMRERNLS 295
F + + +S
Sbjct: 238 DFKKRKWIS 246
>gi|383810456|ref|ZP_09965950.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Prevotella sp.
oral taxon 306 str. F0472]
gi|383356824|gb|EID34314.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Prevotella sp.
oral taxon 306 str. F0472]
Length = 248
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 101/250 (40%), Positives = 152/250 (60%), Gaps = 7/250 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR++SSRF GKPL + GKP+IQ +ER K + L + VATD+ I +
Sbjct: 2 KFLGIIPARYSSSRFPGKPLAMLGGKPVIQHVYERVK--SVLTDVYVATDNAHIYKVVTD 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG IMT E NGTER +EAL K+E K+D+V+NIQGDEP I+ E I ++ +
Sbjct: 60 FGGKAIMTREEHDNGTERVSEALDKIEGKFDVVINIQGDEPFIQSEQIKILMSSFADEQT 119
Query: 169 AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPY----NKSGKVNPQFPYLLH 224
+ + V +D N K V+DNH A+YFSR +IP+ N++ ++ +P+L H
Sbjct: 120 QIATLGVPLKSMDDVSKSNTPKIVIDNHNNALYFSRSVIPFVRGINQADWLS-HYPFLKH 178
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEK 284
+G+ +Y + L+ L + L+L E LEQL+ L+NGY++KV D E +D P+D+
Sbjct: 179 VGLYAYRTETLREISKLPLSSLELAERLEQLRWLQNGYRIKVCITDIETISIDTPQDLVN 238
Query: 285 IESFMRERNL 294
E ++++ NL
Sbjct: 239 AEEYLKQINL 248
>gi|298481209|ref|ZP_06999403.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Bacteroides sp.
D22]
gi|423213710|ref|ZP_17200239.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bacteroides
xylanisolvens CL03T12C04]
gi|298272783|gb|EFI14350.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Bacteroides sp.
D22]
gi|392693639|gb|EIY86870.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bacteroides
xylanisolvens CL03T12C04]
Length = 250
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 106/254 (41%), Positives = 155/254 (61%), Gaps = 16/254 (6%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR+AS+RF KPL + GK +IQR +E ++A LD VATDDE+I +
Sbjct: 2 KFLGIIPARYASTRFPAKPLAMLGGKTVIQRVYE--QVAGVLDDAYVATDDERIEAAVKA 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG V+MTS ++GT+RC EA K+ +D+VVNIQGDEP I+P +D A++A +
Sbjct: 60 FGGKVVMTSVHHKSGTDRCYEACTKIGGDFDVVVNIQGDEPFIQPSQLD----AVKACFE 115
Query: 169 AVFSTAVTSLKPEDAFDP-------NRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF-- 219
V + T +KP A +P N K VV+ + A+YFSR +IPY ++ +
Sbjct: 116 DVTTQIATLVKPFTADEPFAVLENVNSPKVVVNTNWNALYFSRSIIPYQRNAEKQDWLKG 175
Query: 220 -PYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDA 278
Y H+G+ +Y ++ LK L + L+L E LEQL+ LENGYK+KV + E G+D
Sbjct: 176 HTYYKHIGLYAYRTDVLKEITMLPQSSLELAESLEQLRWLENGYKIKVGISEVETIGIDT 235
Query: 279 PEDVEKIESFMRER 292
P+D+E+ E F++ R
Sbjct: 236 PQDLERAEEFLKNR 249
>gi|59713610|ref|YP_206385.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio fischeri
ES114]
gi|197336956|ref|YP_002158025.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio fischeri
MJ11]
gi|423687744|ref|ZP_17662547.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio fischeri
SR5]
gi|75431318|sp|Q5E0E9.1|KDSB_VIBF1 RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|238689986|sp|B5ETK7.1|KDSB_VIBFM RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|59481858|gb|AAW87497.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio fischeri
ES114]
gi|197314208|gb|ACH63657.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio fischeri
MJ11]
gi|371492932|gb|EHN68536.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio fischeri
SR5]
Length = 249
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 106/243 (43%), Positives = 148/243 (60%), Gaps = 7/243 (2%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR+ S+R GKPL +I GKPMIQ +E++ A D +++ATDD +I + FG D
Sbjct: 6 IIPARYQSTRLPGKPLADICGKPMIQWVYEQASKAGA-DRVIIATDDSRIEAVVKGFGGD 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS + +GTER E ++K D IVVN+QGDEPLI P II V + L + +
Sbjct: 65 VCMTSPNHESGTERLAEVIEKCGISADEIVVNVQGDEPLIPPSIIQQVAQNLSDSVAPMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK----SGKVNPQFPYLLHLGI 227
+ AVT + +D F+PN VK V D GYA+YFSR IP+++ G+ P L H+GI
Sbjct: 125 TLAVTIDEEDDVFNPNAVKVVTDAEGYALYFSRASIPWDRDAFAQGETLTANPLLRHIGI 184
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKIE 286
+Y + F+ Y P+ L+ E LEQL+VL G K+ V + + A GVD PED+EK+
Sbjct: 185 YAYRAGFINTYINWQPSVLEKIECLEQLRVLWYGEKIHVAVAKEAPAAGVDTPEDLEKVR 244
Query: 287 SFM 289
+ +
Sbjct: 245 AIL 247
>gi|160884496|ref|ZP_02065499.1| hypothetical protein BACOVA_02480 [Bacteroides ovatus ATCC 8483]
gi|156110235|gb|EDO11980.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Bacteroides
ovatus ATCC 8483]
Length = 250
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 104/251 (41%), Positives = 151/251 (60%), Gaps = 10/251 (3%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR+AS+RF KPL + GK +IQR +E ++A LD VATDDE+I +
Sbjct: 2 KFLGIIPARYASTRFPAKPLAMLGGKTVIQRVYE--QVAGVLDDAYVATDDERIEAAVKA 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG V+MTS ++GT+RC EA K+ +D+VVNIQGDEP I+P +D V A
Sbjct: 60 FGGKVVMTSVDHKSGTDRCYEACTKIGGDFDVVVNIQGDEPFIQPSQLDAVKACFDDATT 119
Query: 169 AVFSTAVTSLKPEDAF----DPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF---PY 221
+ +T V ++AF + N K VV+ + A+YFSR +IPY ++ + Y
Sbjct: 120 QI-ATLVKPFTADEAFAVLENVNSPKVVVNKNWNALYFSRSIIPYQRNAEKQDWLKGHTY 178
Query: 222 LLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPED 281
H+G+ +Y + LK L + L+L E LEQL+ LENGYK+KV + E G+D P+D
Sbjct: 179 YKHIGLYAYRTEVLKEITMLPQSSLELAESLEQLRWLENGYKIKVGISEVETIGIDTPQD 238
Query: 282 VEKIESFMRER 292
+E+ E F++ R
Sbjct: 239 LERAEEFLKNR 249
>gi|258647363|ref|ZP_05734832.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Prevotella
tannerae ATCC 51259]
gi|260852789|gb|EEX72658.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Prevotella
tannerae ATCC 51259]
Length = 255
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 96/252 (38%), Positives = 154/252 (61%), Gaps = 10/252 (3%)
Query: 47 RSRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECC 106
+ + + IIPAR++S+RF GKPL + GKP+I+R +ER +A ++ + VATDD++I +
Sbjct: 3 KMKAIAIIPARYSSTRFPGKPLALLGGKPIIERVYER--VAQVIEDVYVATDDQRIFDAV 60
Query: 107 QQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAA 166
+ FG +V+MTS + ++GT+RC EA K+ K D+V+NIQGDEP I + +++
Sbjct: 61 EAFGGNVVMTSTAHKSGTDRCCEAFNKIAKTADVVINIQGDEPFIAAPQLQAILQCFD-D 119
Query: 167 PDAVFSTAVTSLKPEDAF----DPNRVKCVVDNHGYAIYFSRGLIPYNKS---GKVNPQF 219
P A +T V + D+F DPN K V+DNH +A+YFSR +IPY ++ +
Sbjct: 120 PSADIATLVQPFQKNDSFVALADPNSPKVVLDNHNFALYFSRSIIPYQRNLPQAEWLTHH 179
Query: 220 PYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAP 279
Y H+GI ++ L+ L + L+ E LEQL+ L+ GY++KV + G+D P
Sbjct: 180 AYYRHVGIYAFRPAVLRALTQLSVSSLESCESLEQLRWLQAGYRIKVAETQISTIGIDTP 239
Query: 280 EDVEKIESFMRE 291
ED+++ E F+ +
Sbjct: 240 EDLKQAEIFLTQ 251
>gi|410939743|ref|ZP_11371569.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
noguchii str. 2006001870]
gi|410785182|gb|EKR74147.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
noguchii str. 2006001870]
Length = 248
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 106/249 (42%), Positives = 145/249 (58%), Gaps = 7/249 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+++G+IPAR+ASSRF GKPL I K MI+ T+ + ++ L LVVATDD +I E +
Sbjct: 4 KILGVIPARYASSRFPGKPLAKIGDKTMIEWTYRNASRSSALSELVVATDDIRIHEVVLK 63
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG IMTS +GT+R E + +Y +++NIQGDEP IEPE++DGV + P+
Sbjct: 64 FGGKSIMTSPDHPSGTDRIIEVANQF-SEYSVIINIQGDEPGIEPELVDGVASLKASHPE 122
Query: 169 AVFST-AVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
ST A+ L A DPNRVK ++D +G AIYFSR LIP + P HLGI
Sbjct: 123 WAMSTAAIPLLDFSHATDPNRVKVIIDRNGKAIYFSRSLIP----SQFKTTVPLYRHLGI 178
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVE-KIE 286
YD +FL Y L + L+ E LEQL+ +E GY + + VD P D+E IE
Sbjct: 179 YGYDRDFLLQYNSLPKSNLEESESLEQLRAIEAGYGIGIYLSKEAGLSVDTPADLEIVIE 238
Query: 287 SFMRERNLS 295
F + + +S
Sbjct: 239 DFKKRKWIS 247
>gi|418723321|ref|ZP_13282160.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
interrogans str. UI 12621]
gi|409963021|gb|EKO26750.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
interrogans str. UI 12621]
Length = 247
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 108/249 (43%), Positives = 145/249 (58%), Gaps = 7/249 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+++G+IPAR+ASSRF GKPL I K MI+ T+ + ++ L LVVATDD +I E Q+
Sbjct: 3 KILGVIPARYASSRFPGKPLAKIGDKTMIEWTYRNASRSSVLSELVVATDDVRIHEVVQK 62
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG ++TS +GT+R E + +Y I+VNIQGDEP IEPE+IDGV + P+
Sbjct: 63 FGGRSVVTSSDHPSGTDRIIEVANQF-SEYSIIVNIQGDEPGIEPELIDGVASLKASHPE 121
Query: 169 AVFST-AVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
ST AV L A D NRVK ++D +G AIYFSR LIP + P HLGI
Sbjct: 122 WAMSTAAVPLLDFSHAIDFNRVKVIIDRNGKAIYFSRSLIP----SQFKTTVPLYRHLGI 177
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVE-KIE 286
YD +FL Y L + L+ E LEQL+ +E GY + + VD P D+E IE
Sbjct: 178 YGYDRDFLLQYNSLPKSNLEESESLEQLRAIEAGYGIGIYLSKEAGLSVDTPADLEIVIE 237
Query: 287 SFMRERNLS 295
F + + +S
Sbjct: 238 DFKKRKWIS 246
>gi|295084077|emb|CBK65600.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Bacteroides
xylanisolvens XB1A]
Length = 250
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 106/254 (41%), Positives = 155/254 (61%), Gaps = 16/254 (6%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR+AS+RF KPL + GK +IQR +E ++A LD VATDDE+I +
Sbjct: 2 KFLGIIPARYASTRFPAKPLAMLGGKTVIQRVYE--QVAGVLDDAYVATDDERIEAAVKA 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG V+MTS ++GT+RC EA K+ +D+VVNIQGDEP I+P +D A++A +
Sbjct: 60 FGGKVVMTSVHHKSGTDRCYEACTKIGGDFDVVVNIQGDEPFIQPSQLD----AVKACFE 115
Query: 169 AVFSTAVTSLKPEDAFDP-------NRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF-- 219
V + T +KP A +P N K VV+ + A+YFSR +IPY ++ +
Sbjct: 116 DVTTQIATLVKPFTADEPFAVLENVNSPKVVVNKNWNALYFSRSIIPYQRNAEKQDWLKG 175
Query: 220 -PYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDA 278
Y H+G+ +Y ++ LK L + L+L E LEQL+ LENGYK+KV + E G+D
Sbjct: 176 HTYYKHIGLYAYRTDVLKEITMLPQSSLELAESLEQLRWLENGYKIKVGISEVETIGIDT 235
Query: 279 PEDVEKIESFMRER 292
P+D+E+ E F++ R
Sbjct: 236 PQDLERAEEFLKNR 249
>gi|330997920|ref|ZP_08321754.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Paraprevotella
xylaniphila YIT 11841]
gi|329569524|gb|EGG51294.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Paraprevotella
xylaniphila YIT 11841]
Length = 252
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 102/250 (40%), Positives = 150/250 (60%), Gaps = 10/250 (4%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
+GIIPAR+AS+RF GKPL + GK +IQR +E +++ +D ++VATDDE+I + + FG
Sbjct: 4 IGIIPARYASTRFPGKPLAMLGGKTVIQRVYE--QVSGAVDDVLVATDDERILKAVEGFG 61
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAV 170
+MT ++GT+RC EA K YD+VVNIQGDEP I+P+ +D +KA P
Sbjct: 62 GKAVMTRADHKSGTDRCYEAYVSQGKPYDVVVNIQGDEPFIQPQQLDA-IKACFEDPQTE 120
Query: 171 FSTAVTSLKPEDAF----DPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP---YLL 223
+T V D + + N K VV+ A+YFSR +IPY ++ Y
Sbjct: 121 IATLVKPFTSADGWGALENVNSPKVVVNRRMQALYFSRSIIPYQRNKDKTEWLKGHVYYK 180
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVE 283
H+G+ +Y ++ LK L +PL+L E LEQL+ LENGY +KV + E G+D P D+E
Sbjct: 181 HIGLYAYKADVLKELTSLPQSPLELAESLEQLRWLENGYTIKVGTSEIETIGIDTPADLE 240
Query: 284 KIESFMRERN 293
E+F++ R+
Sbjct: 241 AAEAFLKNRS 250
>gi|303235532|ref|ZP_07322141.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Prevotella
disiens FB035-09AN]
gi|302484269|gb|EFL47255.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Prevotella
disiens FB035-09AN]
Length = 248
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 99/246 (40%), Positives = 153/246 (62%), Gaps = 5/246 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+V+GIIPAR+ASSRF GKPL + GK +I+ E +++ LD + VATDD++I + +
Sbjct: 2 KVIGIIPARYASSRFPGKPLAKLGGKYVIEHVVE--QVSAVLDDVYVATDDQRIYDTVTR 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
GA +MT ++GT+R EAL+K+ +D+VVNIQGDEP I+ I+ VV+
Sbjct: 60 LGAKAVMTRSDHQSGTDRIAEALEKVGGAFDVVVNIQGDEPFIQKSQIETVVECFNDENT 119
Query: 169 AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ---FPYLLHL 225
+ + E A +PN K ++DN+ YA+YF+R L+PY ++ + +P+L H+
Sbjct: 120 QIATLGKRFASIEAARNPNSPKIILDNNNYALYFTRALVPYVRNVVEDEWLRVYPFLKHI 179
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKI 285
G+ +Y N L+ L + L+ E LEQL+ L+NGYK+KV D E G+D PED+++
Sbjct: 180 GLYAYKPNVLQEITKLPQSSLEKVEGLEQLRWLQNGYKIKVGLTDVETVGIDTPEDLQRA 239
Query: 286 ESFMRE 291
E F++E
Sbjct: 240 EEFLKE 245
>gi|206889456|ref|YP_002247865.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase
[Thermodesulfovibrio yellowstonii DSM 11347]
gi|226724345|sp|B5YGT5.1|KDSB_THEYD RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|206741394|gb|ACI20451.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase
[Thermodesulfovibrio yellowstonii DSM 11347]
Length = 255
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 103/247 (41%), Positives = 153/247 (61%), Gaps = 11/247 (4%)
Query: 50 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQF 109
+ +IPAR+ S+RF GKPL + KP+IQ +ER+K + +D + VATDD +I + F
Sbjct: 3 TICVIPARYGSTRFPGKPLAFLKNKPIIQHVYERAKSSKMIDEVFVATDDSRILHTVESF 62
Query: 110 GADVIMTSESCRNGTERCNEALQK-LEKKYD-----IVVNIQGDEPLIEPEIIDGVVKAL 163
G IMTS +GT+R EA+ K L++ Y+ IV+N+QGDEPLI+ E+ID ++ +
Sbjct: 63 GGKAIMTSSKHPSGTDRIAEAVDKLLQEGYNLQESSIVINLQGDEPLIKKEMIDQLIDLM 122
Query: 164 QAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK----SGKVNPQF 219
+ D++ + A K +D F+PN VK V D +GYA+YFSR IP+++ G F
Sbjct: 123 KNENDSIGTLAKRIEKEDDFFNPNIVKVVFDKNGYALYFSRSPIPFDREKFIKGFSKNNF 182
Query: 220 PYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAP 279
Y H+GI Y+ LK + GL + L+ E LEQL+ LENG K+KV ++++ G+D P
Sbjct: 183 MY-KHIGIYGYNVRILKNFVGLPMSRLEEIESLEQLRALENGIKIKVGLTEYDSFGIDTP 241
Query: 280 EDVEKIE 286
ED+E E
Sbjct: 242 EDLEVAE 248
>gi|262406548|ref|ZP_06083097.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Bacteroides sp.
2_1_22]
gi|294645699|ref|ZP_06723386.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Bacteroides
ovatus SD CC 2a]
gi|345510101|ref|ZP_08789676.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bacteroides sp.
D1]
gi|229445450|gb|EEO51241.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bacteroides sp.
D1]
gi|262355251|gb|EEZ04342.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Bacteroides sp.
2_1_22]
gi|292638978|gb|EFF57309.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Bacteroides
ovatus SD CC 2a]
Length = 250
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 106/254 (41%), Positives = 155/254 (61%), Gaps = 16/254 (6%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR+AS+RF KPL + GK +IQR +E ++A LD VATDDE+I +
Sbjct: 2 KFLGIIPARYASTRFPAKPLAMLGGKTVIQRVYE--QVAGVLDDAYVATDDERIEAAVKA 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG V+MTS ++GT+RC EA K+ +D+VVNIQGDEP I+P +D A++A +
Sbjct: 60 FGGKVVMTSIHHKSGTDRCYEACTKIGGDFDVVVNIQGDEPFIQPSQLD----AVKACFE 115
Query: 169 AVFSTAVTSLKPEDAFDP-------NRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF-- 219
V + T +KP A +P N K VV+ + A+YFSR +IPY ++ +
Sbjct: 116 DVTTQIATLVKPFTADEPFAVLENVNSPKVVVNKNWNALYFSRSIIPYQRNAEKQDWLKG 175
Query: 220 -PYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDA 278
Y H+G+ +Y ++ LK L + L+L E LEQL+ LENGYK+KV + E G+D
Sbjct: 176 HTYYKHIGLYAYRTDVLKEITMLPQSSLELAESLEQLRWLENGYKIKVGISEVETIGIDT 235
Query: 279 PEDVEKIESFMRER 292
P+D+E+ E F++ R
Sbjct: 236 PQDLERAEEFLKNR 249
>gi|68248609|ref|YP_247721.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Haemophilus
influenzae 86-028NP]
gi|145636736|ref|ZP_01792402.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Haemophilus
influenzae PittHH]
gi|386265572|ref|YP_005829064.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase
(CMP-KDOsynthetase) [Haemophilus influenzae R2846]
gi|81336964|sp|Q4QPI6.1|KDSB_HAEI8 RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|68056808|gb|AAX87061.1| 3-deoxy-D-manno-octulosonic acid cytidylyltransferase [Haemophilus
influenzae 86-028NP]
gi|145270034|gb|EDK09971.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Haemophilus
influenzae PittHH]
gi|309972808|gb|ADO96009.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase
(CMP-KDOsynthetase) [Haemophilus influenzae R2846]
Length = 254
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 108/247 (43%), Positives = 152/247 (61%), Gaps = 11/247 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPARFASSR GKPL +I GKPMIQ +E++ L + + +++ATD+E +A+ + FGA+
Sbjct: 6 IIPARFASSRLPGKPLADIAGKPMIQHVFEKA-LQSGANRVIIATDNENVADVAKNFGAE 64
Query: 113 VIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS + +GTER E ++KL +I+VNIQGDEPLI P I+ V L +
Sbjct: 65 VCMTSVNHNSGTERLAEVVEKLAIPDNEIIVNIQGDEPLIPPVIVRQVADNLAKFNVNMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ--------FPYLL 223
S AV E+ F+PN VK + D GY +YFSR +IPY++ +N Q YL
Sbjct: 125 SLAVKIHDAEELFNPNAVKVLTDKDGYVLYFSRSVIPYDRDQFMNLQDVQKVQLADAYLR 184
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDV 282
H+GI +Y + F+K Y PT L+ E LEQL+VL NG ++ V + + A GVD ED+
Sbjct: 185 HIGIYAYRAGFIKQYVQWAPTQLENLEKLEQLRVLYNGERIHVELAKEVPAVGVDTAEDL 244
Query: 283 EKIESFM 289
EK+ + +
Sbjct: 245 EKVRAIL 251
>gi|423296336|ref|ZP_17274421.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bacteroides ovatus
CL03T12C18]
gi|392670059|gb|EIY63544.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bacteroides ovatus
CL03T12C18]
Length = 250
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 103/251 (41%), Positives = 152/251 (60%), Gaps = 10/251 (3%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR+AS+RF KPL + GK +IQR +E ++A LD VATDDE+I +
Sbjct: 2 KFLGIIPARYASTRFPAKPLAMLGGKTVIQRVYE--QVAGVLDDAYVATDDERIEAAVKA 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG V+MTS ++GT+RC EA K+ ++D+VVNIQGDEP I+P +D V +
Sbjct: 60 FGGKVVMTSVHHKSGTDRCYEACTKIGGEFDVVVNIQGDEPFIQPSQLDAVKACFEDVTT 119
Query: 169 AVFSTAVTSLKPEDAF----DPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF---PY 221
+ +T V ++AF + N K VV+ + A+YFSR +IPY ++ + Y
Sbjct: 120 QI-ATLVKPFTADEAFAVLENVNSPKVVVNKNWNALYFSRSIIPYQRNAEKQDWLKGHTY 178
Query: 222 LLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPED 281
H+G+ +Y + LK L + L+L E LEQL+ LENGYK+KV + E G+D P+D
Sbjct: 179 YKHIGLYAYRTEVLKEITMLPQSSLELAESLEQLRWLENGYKIKVGISEVETIGIDTPQD 238
Query: 282 VEKIESFMRER 292
+E+ E F++ R
Sbjct: 239 LERAEEFLKNR 249
>gi|120601318|ref|YP_965718.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Desulfovibrio
vulgaris DP4]
gi|226724283|sp|A1VA25.1|KDSB_DESVV RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|120561547|gb|ABM27291.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Desulfovibrio
vulgaris DP4]
Length = 252
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 99/244 (40%), Positives = 150/244 (61%), Gaps = 3/244 (1%)
Query: 52 GIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGA 111
GIIPAR+ASSRF GKPL +ILG+PM ++R++ D + +ATDD +IA+ G
Sbjct: 9 GIIPARYASSRFPGKPLADILGRPMFWHVYDRARRCAAFDEVALATDDARIADAANVLGV 68
Query: 112 DVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAV 170
+MT+E +GT+R +EA +L D +VVNIQGDEP ++P ++D +V A V
Sbjct: 69 PCVMTAEHHPSGTDRVHEAAMRLGVADDAVVVNIQGDEPALDPRMLDQLVAPFADASVRV 128
Query: 171 FSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLL-HLGIQS 229
+T +L ++A P+RVK VV +G A+YFSR IP+ + G V L H+G+ +
Sbjct: 129 -ATLAMALSAQEAQSPDRVKVVVAANGDALYFSRADIPFVRDGDVGGDTAGRLGHIGLYA 187
Query: 230 YDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFM 289
+ L+ + L P+ L+ E LEQL++LENG ++V+ + HGVD PED++ I + +
Sbjct: 188 FRMEALRRFTQLPPSRLEQTEKLEQLRLLENGIAIRVVPTTYRTHGVDRPEDIDVIINLL 247
Query: 290 RERN 293
RE +
Sbjct: 248 REND 251
>gi|293369791|ref|ZP_06616367.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Bacteroides
ovatus SD CMC 3f]
gi|299145956|ref|ZP_07039024.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Bacteroides sp.
3_1_23]
gi|336413513|ref|ZP_08593865.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bacteroides ovatus
3_8_47FAA]
gi|292635213|gb|EFF53729.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Bacteroides
ovatus SD CMC 3f]
gi|298516447|gb|EFI40328.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Bacteroides sp.
3_1_23]
gi|335938557|gb|EGN00447.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bacteroides ovatus
3_8_47FAA]
Length = 250
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 106/254 (41%), Positives = 153/254 (60%), Gaps = 16/254 (6%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR+AS+RF KPL + GK +IQR +E ++A LD VATDDE+I +
Sbjct: 2 KFLGIIPARYASTRFPAKPLAMLGGKTVIQRVYE--QVAGVLDDAYVATDDERIEAAVKA 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG V+MTS ++GT+RC EA K+ +D+VVNIQGDEP I+P +D A++A D
Sbjct: 60 FGGKVVMTSVHHKSGTDRCYEACTKIGGDFDVVVNIQGDEPFIQPSQLD----AVKACFD 115
Query: 169 AVFSTAVTSLKPEDAFDP-------NRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF-- 219
+ T +KP A +P N K VV+ + A+YFSR +IPY ++ +
Sbjct: 116 DATTQIATLVKPFTADEPFAVLENVNSPKVVVNKNWNALYFSRSIIPYQRNAEKQDWLKG 175
Query: 220 -PYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDA 278
Y H+G+ +Y + LK L + L+L E LEQL+ LENGYK+KV + E G+D
Sbjct: 176 HTYYKHIGLYAYRTEVLKEITMLPQSSLELAESLEQLRWLENGYKIKVGISEVETIGIDT 235
Query: 279 PEDVEKIESFMRER 292
P+D+E+ E F++ R
Sbjct: 236 PQDLERAEEFLKNR 249
>gi|322418944|ref|YP_004198167.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Geobacter sp.
M18]
gi|320125331|gb|ADW12891.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Geobacter sp.
M18]
Length = 251
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 100/247 (40%), Positives = 149/247 (60%), Gaps = 13/247 (5%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
++ +IPAR+AS+RFEGK L +I+G+PM+Q +ER+ A+ + ++VATDDE+IA +
Sbjct: 2 KITAVIPARYASTRFEGKALADIMGRPMVQHVYERASKASLVSEVIVATDDERIAAAVRA 61
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG V MTS GT+R E +L+ DI+VN+QGDEPLI+P +ID + + P
Sbjct: 62 FGGRVEMTSVEHETGTDRLAEVAGRLDA--DIIVNVQGDEPLIDPAMIDQAIAPMLEDPS 119
Query: 169 AVFSTAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNP---------Q 218
+T +K D PN VK V D G +YFSR +P+ + K N +
Sbjct: 120 IPMATLKCRIKTLHDFLSPNVVKVVSDPKGNVLYFSRSPLPFFRD-KWNDLKDEAFCCGK 178
Query: 219 FPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDA 278
H+G+ Y FL ++ L P+ L++ E LEQL+VLENGY++KV++ + E+ GVD
Sbjct: 179 LLCYKHVGLYVYRREFLPVFAALPPSYLEMAEKLEQLRVLENGYRIKVVETECESIGVDT 238
Query: 279 PEDVEKI 285
P D+EK+
Sbjct: 239 PADLEKV 245
>gi|373500812|ref|ZP_09591185.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Prevotella
micans F0438]
gi|371951770|gb|EHO69613.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Prevotella
micans F0438]
Length = 247
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 98/245 (40%), Positives = 152/245 (62%), Gaps = 7/245 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ + IIPAR+ SSRF GKPL + GKP+I+R +++ LD + VATDD +IA+C +
Sbjct: 2 KTIAIIPARYGSSRFPGKPLALLGGKPVIERVVRQAE--KVLDEVYVATDDNRIAQCVES 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG IMT ++GT+R EAL KL D+V+NIQGDEP + ++ ++ + ++
Sbjct: 60 FGGYPIMTRADHQSGTDRVCEALDKLGSDADVVINIQGDEPFVNRSQLETLISSFESPET 119
Query: 169 AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ----FPYLLH 224
+ + T E+A +PN K V+DN GYA+YF+R ++P+ + GK + +P+L H
Sbjct: 120 QIATLGKTFSTIEEAKNPNSPKIVLDNEGYAMYFTRSVVPFIR-GKDESEWLACYPFLKH 178
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEK 284
+G+ +Y S+ L+ L + L+L E LEQL+ L+NGYK+KV E G+D P D+E+
Sbjct: 179 IGLYAYRSDVLRRITRLPQSSLELAESLEQLRWLQNGYKIKVGITHIETVGIDTPADLER 238
Query: 285 IESFM 289
E F+
Sbjct: 239 AEKFL 243
>gi|421110419|ref|ZP_15570915.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
santarosai str. JET]
gi|410804246|gb|EKS10368.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
santarosai str. JET]
Length = 246
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 107/247 (43%), Positives = 143/247 (57%), Gaps = 7/247 (2%)
Query: 48 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQ 107
++++GIIPAR+ASSRF GKPL I K MI+ T+ + +T L LVVATDD +I + Q
Sbjct: 2 AKILGIIPARYASSRFPGKPLAKIGDKTMIEWTYRNASRSTVLSELVVATDDIRIHKVVQ 61
Query: 108 QFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
FG + +MT +GT+R E + +Y ++VNIQGDEP IEPE+IDGV + P
Sbjct: 62 DFGGNSVMTKADHISGTDRIIEVANRF-SEYSVIVNIQGDEPGIEPELIDGVASLKVSHP 120
Query: 168 DAVFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLG 226
+ STA L DPNRVK ++D +G AIYFSR LIP + P HLG
Sbjct: 121 EWEMSTAAVPLFDFSHGEDPNRVKVIIDRNGKAIYFSRSLIP----SQFKKNVPLYRHLG 176
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVE-KI 285
I YD +FL Y L + L+ E LEQL+ +E GY + V VD P+D+E I
Sbjct: 177 IYGYDRDFLLKYDSLPKSNLEESESLEQLRAIEAGYGIGVYLAREAGLSVDTPDDLEIVI 236
Query: 286 ESFMRER 292
E F + +
Sbjct: 237 EDFKKRK 243
>gi|313895419|ref|ZP_07828976.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Selenomonas sp.
oral taxon 137 str. F0430]
gi|312976314|gb|EFR41772.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Selenomonas sp.
oral taxon 137 str. F0430]
Length = 244
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 100/244 (40%), Positives = 143/244 (58%), Gaps = 6/244 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+V+ IIPAR+AS+R GKPL +I GKPMI R +ER+ A + +VVATDDE+I +
Sbjct: 2 KVLCIIPARYASTRLPGKPLRDIAGKPMIVRVYERALRARLVQDVVVATDDERIRAAVEA 61
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
G MT GT+R E ++ YD+++N+QGDEPLIEP +ID +V+ A
Sbjct: 62 HGGRAAMTRADHATGTDRLAEVAARM-TDYDLIINVQGDEPLIEPSVIDALVEPFLADET 120
Query: 169 AVFSTAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+TA T + + +PN VK + D G A+YFSR IPY + P H+GI
Sbjct: 121 LTMATAKTEITDGAEQENPNNVKVITDKSGNALYFSRARIPYARV----PGAKVYKHIGI 176
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
+Y +FL Y + TPL+L E LEQL+ +ENGY+++VI+ + GVD ED+ +
Sbjct: 177 YAYRRDFLLTYARMVQTPLELSESLEQLRAIENGYRIRVIETNAVFIGVDTEEDLIAVNE 236
Query: 288 FMRE 291
R+
Sbjct: 237 VYRK 240
>gi|417846304|ref|ZP_12492312.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Haemophilus
haemolyticus M21639]
gi|341952706|gb|EGT79227.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Haemophilus
haemolyticus M21639]
Length = 254
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 108/247 (43%), Positives = 151/247 (61%), Gaps = 11/247 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPARFASSR GKPL +I GKPMIQ +E++ L + +++ATD+E +A+ + FGA+
Sbjct: 6 IIPARFASSRLPGKPLADIAGKPMIQHVFEKA-LQSGASRVIIATDNENVADVAKSFGAE 64
Query: 113 VIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS + +GTER E ++KL +I+VNIQGDEPLI P I+ V L +
Sbjct: 65 VCMTSVNHNSGTERLAEVVEKLAIPDNEIIVNIQGDEPLIPPVIVRQVADNLAKFNVNMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ--------FPYLL 223
S AV E+ F+PN VK + D GY +YFSR +IPY++ +N Q YL
Sbjct: 125 SLAVKIHDAEELFNPNAVKVLTDKEGYVLYFSRSVIPYDRDQFMNLQDVQKVQLADAYLR 184
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDV 282
H+GI +Y + F+K Y PT L+ E LEQL+VL NG ++ V + + A GVD ED+
Sbjct: 185 HIGIYAYRAGFIKQYVQWAPTQLENLEKLEQLRVLYNGERIHVELAKEVPAVGVDTAEDL 244
Query: 283 EKIESFM 289
EK+ + +
Sbjct: 245 EKVRAIL 251
>gi|417843744|ref|ZP_12489812.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Haemophilus
haemolyticus M21127]
gi|341948657|gb|EGT75277.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Haemophilus
haemolyticus M21127]
Length = 254
Score = 187 bits (476), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 108/247 (43%), Positives = 151/247 (61%), Gaps = 11/247 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPARFASSR GKPL +I GKPMIQ +E++ L + +++ATD+E +A+ + FGA+
Sbjct: 6 IIPARFASSRLPGKPLADIAGKPMIQHVFEKA-LQSGASRVIIATDNENVADVAKSFGAE 64
Query: 113 VIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS + +GTER E ++KL +I+VNIQGDEPLI P I+ V L +
Sbjct: 65 VCMTSVNHNSGTERLAEVVEKLAIPDNEIIVNIQGDEPLIPPVIVRQVADNLAKFNVNMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ--------FPYLL 223
S AV E+ F+PN VK + D GY +YFSR +IPY++ +N Q YL
Sbjct: 125 SLAVKIHDAEELFNPNAVKVLTDKEGYVLYFSRSVIPYDRDQFMNLQDVHKVQLADAYLR 184
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDV 282
H+GI +Y + F+K Y PT L+ E LEQL+VL NG ++ V + + A GVD ED+
Sbjct: 185 HIGIYAYRAGFIKQYVQWAPTQLENLEKLEQLRVLYNGERIHVELAKEVPAVGVDTAEDL 244
Query: 283 EKIESFM 289
EK+ + +
Sbjct: 245 EKVRAIL 251
>gi|422004079|ref|ZP_16351303.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Leptospira
santarosai serovar Shermani str. LT 821]
gi|417257286|gb|EKT86690.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Leptospira
santarosai serovar Shermani str. LT 821]
Length = 246
Score = 187 bits (476), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 107/246 (43%), Positives = 142/246 (57%), Gaps = 7/246 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+++GIIPAR+ASSRF GKPL I K MI+ T+ + +T L LVVATDD +I + Q
Sbjct: 3 KILGIIPARYASSRFPGKPLAKIGDKTMIEWTYRNASRSTVLSELVVATDDIRIHKVVQD 62
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG + +MT +GT+R E + +Y ++VNIQGDEP IEPE+IDGV + P+
Sbjct: 63 FGGNSVMTKADHISGTDRIIEVANRFS-EYSVIVNIQGDEPGIEPELIDGVASLKVSHPE 121
Query: 169 AVFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
STA L DPNRVK ++D +G AIYFSR LIP + P HLGI
Sbjct: 122 WEMSTAAVPLFDFSHGKDPNRVKVIIDRNGKAIYFSRSLIP----SQFKKNVPLYRHLGI 177
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVE-KIE 286
YD +FL Y L + L+ E LEQL+ +E GY + V VD P+D+E IE
Sbjct: 178 YGYDRDFLLKYDSLPKSNLEESESLEQLRAIEAGYGIGVYLAREAGLSVDTPDDLEIVIE 237
Query: 287 SFMRER 292
F + +
Sbjct: 238 DFKKRK 243
>gi|237718644|ref|ZP_04549125.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bacteroides sp.
2_2_4]
gi|229452104|gb|EEO57895.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bacteroides sp.
2_2_4]
Length = 250
Score = 187 bits (476), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 106/254 (41%), Positives = 154/254 (60%), Gaps = 16/254 (6%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR+AS+RF KPL + GK +IQR +E ++A LD VATDDE+I +
Sbjct: 2 KFLGIIPARYASTRFPAKPLAMLGGKTVIQRVYE--QVAGVLDDAYVATDDERIEAAVKA 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG V+MTS ++GT+RC EA K+ +D+VVNIQGDEP I+P +D A++A +
Sbjct: 60 FGGKVVMTSVHHKSGTDRCYEACTKIGGDFDVVVNIQGDEPFIQPSQLD----AVKACFE 115
Query: 169 AVFSTAVTSLKPEDAFDP-------NRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF-- 219
V + T +KP A +P N K VV+ + A+YFSR +IPY ++ +
Sbjct: 116 DVTTQIATLVKPFTADEPFAVLENVNSPKVVVNKNWNALYFSRSIIPYQRNAEKQDWLKG 175
Query: 220 -PYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDA 278
Y H+G+ +Y + LK L + L+L E LEQL+ LENGYK+KV + E G+D
Sbjct: 176 HTYYKHIGLYAYRTEVLKEITMLPQSSLELAESLEQLRWLENGYKIKVGISEVETIGIDT 235
Query: 279 PEDVEKIESFMRER 292
P+D+E+ E F++ R
Sbjct: 236 PQDLERAEDFLKNR 249
>gi|383111440|ref|ZP_09932252.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bacteroides sp.
D2]
gi|423286548|ref|ZP_17265399.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bacteroides ovatus
CL02T12C04]
gi|313696839|gb|EFS33674.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bacteroides sp.
D2]
gi|392675235|gb|EIY68677.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bacteroides ovatus
CL02T12C04]
Length = 250
Score = 187 bits (476), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 106/254 (41%), Positives = 154/254 (60%), Gaps = 16/254 (6%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR+AS+RF KPL + GK +IQR +E ++A LD VATDDE+I +
Sbjct: 2 KFLGIIPARYASTRFPAKPLAMLGGKTVIQRVYE--QVAGVLDDAYVATDDERIEAAVKA 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG V+MTS ++GT+RC EA K+ +D+VVNIQGDEP I+P +D A++A +
Sbjct: 60 FGGKVVMTSVHHKSGTDRCYEACTKIGGDFDVVVNIQGDEPFIQPSQLD----AVKACFE 115
Query: 169 AVFSTAVTSLKPEDAFDP-------NRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF-- 219
V + T +KP A +P N K VV+ + A+YFSR +IPY ++ +
Sbjct: 116 DVTTQIATLVKPFTADEPFAVLENVNSPKVVVNKNWNALYFSRSIIPYQRNAEKQDWLKG 175
Query: 220 -PYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDA 278
Y H+G+ +Y + LK L + L+L E LEQL+ LENGYK+KV + E G+D
Sbjct: 176 HTYYKHIGLYAYRTEVLKEITMLPQSSLELAESLEQLRWLENGYKIKVGISEVETIGIDT 235
Query: 279 PEDVEKIESFMRER 292
P+D+E+ E F++ R
Sbjct: 236 PQDLERAEEFLKNR 249
>gi|395216376|ref|ZP_10401315.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pontibacter sp.
BAB1700]
gi|394455404|gb|EJF09878.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pontibacter sp.
BAB1700]
Length = 245
Score = 187 bits (476), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 99/240 (41%), Positives = 152/240 (63%), Gaps = 6/240 (2%)
Query: 50 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQF 109
++GIIPAR+AS+RF GKPLV+I GK MIQR +E++ ++ L ++VATDD++I + F
Sbjct: 3 ILGIIPARYASTRFPGKPLVDINGKSMIQRVYEQAS-SSGLTDVIVATDDQRILDHVHSF 61
Query: 110 GADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
G ++T+ ++GT+RC EA Q ++ ++ V+NIQGDEP I+PE I+ + P
Sbjct: 62 GGKAVLTAAHHQSGTDRCFEAYQLHDQPFEYVINIQGDEPFIKPEQIELLATCFN-NPQT 120
Query: 170 VFSTAVTSLK-PEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK---SGKVNPQFPYLLHL 225
+T V + PE+ F+ N K V++ HG A+YFSR IPY + + + Q Y H+
Sbjct: 121 QLATLVKKINTPEELFNVNAPKVVINGHGEALYFSRQPIPYCRNVPNDIWHKQHTYYKHI 180
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKI 285
GI Y ++ L+ L P+ L+L E LEQL+ LENG+++ + E G+D PED+EK+
Sbjct: 181 GIYGYRTDILEQITQLPPSSLELAESLEQLRWLENGFRITTAITEFETIGIDTPEDLEKV 240
>gi|340351002|ref|ZP_08673970.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Prevotella
nigrescens ATCC 33563]
gi|339606620|gb|EGQ11587.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Prevotella
nigrescens ATCC 33563]
Length = 251
Score = 187 bits (476), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 100/249 (40%), Positives = 153/249 (61%), Gaps = 7/249 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR+ASSRF GKPL + GK +IQR E +++T L+ + +ATDD++I
Sbjct: 2 KAIGIIPARYASSRFPGKPLAVLGGKYVIQRVME--QVSTVLNDVYIATDDKRIYNTVTS 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
GA IMT+ ++GT+R EAL+++ +D+VVNIQGDEP I+ I+ V+
Sbjct: 60 LGAKAIMTNSDHQSGTDRVAEALEEIGGNFDVVVNIQGDEPFIQKSQIETVMACFNDVGT 119
Query: 169 AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ----FPYLLH 224
+ + E+A +PN K ++DN YA+YF+R L PY + GK + + +L H
Sbjct: 120 QIATLGKPFATIEEAKNPNSPKIILDNRNYAMYFTRALAPYIR-GKEESEWLSAYSFLKH 178
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEK 284
+G+ +Y ++ L L + L+L E LEQL+ L+NG+K+KV D E G+D PED+E+
Sbjct: 179 IGLYAYRTDVLDKITKLPQSSLELAEGLEQLRWLQNGFKIKVGLTDVETVGIDTPEDLER 238
Query: 285 IESFMRERN 293
E F+ E+N
Sbjct: 239 AELFLAEQN 247
>gi|359683319|ref|ZP_09253320.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Leptospira
santarosai str. 2000030832]
gi|418747266|ref|ZP_13303575.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
santarosai str. CBC379]
gi|418754591|ref|ZP_13310814.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
santarosai str. MOR084]
gi|409965030|gb|EKO32904.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
santarosai str. MOR084]
gi|410791818|gb|EKR89764.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
santarosai str. CBC379]
Length = 246
Score = 187 bits (476), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 107/246 (43%), Positives = 142/246 (57%), Gaps = 7/246 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+++GIIPAR+ASSRF GKPL I K MI+ T+ + +T L LVVATDD +I + Q
Sbjct: 3 KILGIIPARYASSRFPGKPLAKIGDKTMIEWTYRNASRSTVLSELVVATDDIRIHKVVQD 62
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG + +MT +GT+R E + +Y ++VNIQGDEP IEPE+IDGV + P+
Sbjct: 63 FGGNSVMTKADHISGTDRIIEVANRF-SEYSVIVNIQGDEPGIEPELIDGVASLKVSHPE 121
Query: 169 AVFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
STA L DPNRVK ++D +G AIYFSR LIP + P HLGI
Sbjct: 122 WEMSTAAVPLFDFSHGEDPNRVKVIIDRNGKAIYFSRSLIP----SQFKKNVPLYRHLGI 177
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVE-KIE 286
YD +FL Y L + L+ E LEQL+ +E GY + V VD P+D+E IE
Sbjct: 178 YGYDRDFLLKYDSLPKSNLEESESLEQLRAIEAGYGIGVYLAREAGLSVDTPDDLEIVIE 237
Query: 287 SFMRER 292
F + +
Sbjct: 238 DFKKRK 243
>gi|153806419|ref|ZP_01959087.1| hypothetical protein BACCAC_00683 [Bacteroides caccae ATCC 43185]
gi|149131096|gb|EDM22302.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Bacteroides
caccae ATCC 43185]
Length = 250
Score = 187 bits (476), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 104/252 (41%), Positives = 153/252 (60%), Gaps = 10/252 (3%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR+AS+RF KPL + GK +IQR +E ++A LD VATDDE+I +
Sbjct: 2 KFLGIIPARYASTRFPAKPLAILGGKTVIQRVYE--QVAGVLDDAYVATDDERIEAAVKA 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG V+MTS ++GT+RC EA K+ +D+VVNIQGDEP I+P ++ VKA P
Sbjct: 60 FGGKVVMTSVDHKSGTDRCYEACTKIGGDFDVVVNIQGDEPFIQPSQLNA-VKACFEDPT 118
Query: 169 AVFSTAVTSLKPEDAF----DPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF---PY 221
+T V ++ F + N K VV+ + A+YFSR +IPY ++ + Y
Sbjct: 119 TQIATLVKPFTADEPFAVLENVNSPKVVVNKNWNALYFSRSIIPYQRNTEKQDWLKGHTY 178
Query: 222 LLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPED 281
H+G+ +Y ++ LK L + L+L E LEQL+ LENGYK+KV + E G+D P+D
Sbjct: 179 YKHIGLYAYRTDVLKEITALPQSSLELAESLEQLRWLENGYKIKVGISEVETIGIDTPQD 238
Query: 282 VEKIESFMRERN 293
+E+ E F++ R+
Sbjct: 239 LERAEEFLKSRS 250
>gi|189424787|ref|YP_001951964.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Geobacter lovleyi
SZ]
gi|238692145|sp|B3EAK6.1|KDSB_GEOLS RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|189421046|gb|ACD95444.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Geobacter
lovleyi SZ]
Length = 252
Score = 187 bits (476), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 98/252 (38%), Positives = 149/252 (59%), Gaps = 11/252 (4%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
++V IIPAR+ S+RF GK L ++ GKPMIQ +E++ A+ + +VATDD +IA+ Q
Sbjct: 2 QIVAIIPARYGSTRFPGKALADLAGKPMIQHVYEQTIRASLVSRAIVATDDRRIADVIHQ 61
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
G + IMTS GT+R E + L+ DI+VN+QGDEPLI+P +I+ ++ P
Sbjct: 62 IGGEAIMTSTDHETGTDRLAEVARGLDA--DIIVNVQGDEPLIDPAMINQAIEPFLGNPG 119
Query: 169 AVFSTAVTSLK-PEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS--------GKVNPQF 219
T + +K D PN VK V DN+GYA+YFSR +P+ + + +
Sbjct: 120 LKMGTLKSRVKCLHDFLSPNVVKVVTDNNGYALYFSRSPLPFFRDKWQDLKDEAFASGRL 179
Query: 220 PYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAP 279
H+G+ Y NFL Y + T L+L E LEQL+ LENG +++V++ + E+ GVD P
Sbjct: 180 LCFKHVGLYVYQRNFLLEYAAMPQTFLELSEKLEQLRALENGIRIRVVETEFESLGVDTP 239
Query: 280 EDVEKIESFMRE 291
+D+ K + M++
Sbjct: 240 DDLNKAKERMKQ 251
>gi|373467560|ref|ZP_09558854.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Haemophilus sp.
oral taxon 851 str. F0397]
gi|371758281|gb|EHO47054.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Haemophilus sp.
oral taxon 851 str. F0397]
Length = 254
Score = 187 bits (475), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 108/247 (43%), Positives = 151/247 (61%), Gaps = 11/247 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPARFASSR GKPL +I GKPMIQ +E++ L + +++ATD+E +A+ + FGA+
Sbjct: 6 IIPARFASSRLPGKPLADIAGKPMIQHVFEKA-LQSGASRVIIATDNENVADVAKSFGAE 64
Query: 113 VIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS + +GTER E ++KL +I+VNIQGDEPLI P I+ V L +
Sbjct: 65 VCMTSVNHNSGTERLAEVVEKLAIPDNEIIVNIQGDEPLIPPVIVRQVADNLAKFNVNMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ--------FPYLL 223
S AV E+ F+PN VK + D GY +YFSR +IPY++ +N Q YL
Sbjct: 125 SLAVKIHDAEELFNPNAVKVLTDKDGYVLYFSRSVIPYDRDQFMNLQDVQKVQLADAYLR 184
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDV 282
H+GI +Y + F+K Y PT L+ E LEQL+VL NG ++ V + + A GVD ED+
Sbjct: 185 HIGIYAYRAGFIKQYVQWAPTQLENLEKLEQLRVLYNGERIHVELAKEVPAVGVDTAEDL 244
Query: 283 EKIESFM 289
EK+ + +
Sbjct: 245 EKVRAIL 251
>gi|333031122|ref|ZP_08459183.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bacteroides
coprosuis DSM 18011]
gi|332741719|gb|EGJ72201.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bacteroides
coprosuis DSM 18011]
Length = 390
Score = 187 bits (475), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 103/256 (40%), Positives = 154/256 (60%), Gaps = 10/256 (3%)
Query: 45 NFRSRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAE 104
N + +GIIPAR+AS+RF KPL + GKP+IQR +E ++++ LD + VATDDE+I +
Sbjct: 134 NNHMKFIGIIPARYASTRFPAKPLAVLGGKPVIQRVYE--QVSSILDDVYVATDDERIEK 191
Query: 105 CCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQ 164
Q FG VIMTS ++GT+RC EA QK+ ++D+++NIQGDEP I+ I+ +
Sbjct: 192 AVQDFGGKVIMTSPDHQSGTDRCFEAYQKVGIEFDVIINIQGDEPFIQKSQIEALKSCFL 251
Query: 165 AAPDAVFSTAVTSLKP-----EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS---GKVN 216
+T V ED +PN K VV A+YFSR +IPY ++ +
Sbjct: 252 EDSKTDIATLVKPFSEQQHTLEDLENPNTPKVVVGLDNSALYFSRSVIPYLRNIPKEEWL 311
Query: 217 PQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGV 276
Q + H+G+ +Y + L+ L TPL+L E LEQL+ LENGY +KV + E G+
Sbjct: 312 SQHTFYKHIGLYAYRAQVLEEVTDLAQTPLELSESLEQLRWLENGYHIKVAETHIETIGI 371
Query: 277 DAPEDVEKIESFMRER 292
D P D+E+ E+F++++
Sbjct: 372 DTPHDLERAEAFLQKQ 387
>gi|311031992|ref|ZP_07710082.1| 3-deoxy-D-manno-octulosonatecytidylyltransferase [Bacillus sp.
m3-13]
Length = 243
Score = 187 bits (475), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 104/241 (43%), Positives = 148/241 (61%), Gaps = 5/241 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+VVG+IPAR+ S+RF GKPL I GKPMIQ +E+ + L+ +VVATD E+I +
Sbjct: 2 KVVGVIPARYGSTRFPGKPLALIHGKPMIQHVYEQVVKSEQLNTVVVATDHEEIKNVVEG 61
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG V+MT G++R E K+E D VNIQGDEPLI PE+ID +V A + +P+
Sbjct: 62 FGGQVVMTRTDHETGSDRMAEVTTKVEG--DFYVNIQGDEPLIRPELIDKLVLAAKESPE 119
Query: 169 AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQ 228
V + ED +PN VK V +N G+A+YFSR +P+N++ K Y HLGI
Sbjct: 120 CVVTAKTPIKNEEDVKNPNVVKVVTNNSGFALYFSRSAVPFNRAKK---DITYYKHLGIY 176
Query: 229 SYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESF 288
Y + + + + L+ E LEQL++LENGY +K+++ +A GVD PED+EK+E
Sbjct: 177 GYPKSVITEFVTWPTSSLEAVEVLEQLRLLENGYSIKLVETAFDAVGVDTPEDIEKVERI 236
Query: 289 M 289
+
Sbjct: 237 L 237
>gi|354605151|ref|ZP_09023140.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Alistipes
indistinctus YIT 12060]
gi|353347730|gb|EHB92006.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Alistipes
indistinctus YIT 12060]
Length = 253
Score = 187 bits (475), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 103/251 (41%), Positives = 152/251 (60%), Gaps = 15/251 (5%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ + +IPAR+AS+RF GKPL +++GKPMIQ +E++ D VATDD +I +
Sbjct: 2 KFLALIPARYASTRFPGKPLADLMGKPMIQHVYEKAH--AVFDACYVATDDPRIEQAVLS 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKK----YDIVVNIQGDEPLIEPEIIDGVVKALQ 164
FG V+MTS +GT+RC EAL ++E++ +D+VVNIQGDEP + E ++ + + +
Sbjct: 60 FGGRVVMTSSEHPSGTDRCREALVEVERETGTAFDVVVNIQGDEPFVSREQLELIQQCFE 119
Query: 165 AAPDAVFSTAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ----- 218
+ + +T V P ED F+PN K VV GYA+YFSR +IPY + V PQ
Sbjct: 120 DSGTDI-ATLVKPFGPQEDVFNPNSPKVVVSAQGYALYFSRSVIPYRRG--VEPQQWQEG 176
Query: 219 FPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDA 278
F YL H+G+ +Y + L L L+ E LEQL+ LENG+K+KV + E+ +D
Sbjct: 177 FKYLKHIGMYAYRTGVLHRITDLPRGVLEQCESLEQLRWLENGFKVKVAETLSESLAIDT 236
Query: 279 PEDVEKIESFM 289
P+D+E +FM
Sbjct: 237 PQDLEAARAFM 247
>gi|441497725|ref|ZP_20979934.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Fulvivirga
imtechensis AK7]
gi|441438503|gb|ELR71838.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Fulvivirga
imtechensis AK7]
Length = 239
Score = 187 bits (475), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 101/240 (42%), Positives = 145/240 (60%), Gaps = 6/240 (2%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ S+RF K L +I GK MIQR +E++ A LD ++VATD E I Q F
Sbjct: 1 MIPARYGSTRFPAKALADIGGKSMIQRVYEQASKARMLDEVIVATDHEAIQSVVQGFAGK 60
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFS 172
V MTS++ ++GT+RC EAL YD V+NIQGDEP I P+ ID + L + +
Sbjct: 61 VCMTSKAHQSGTDRCYEALSLQPGAYDYVINIQGDEPFIAPDQIDLLAGLLDG--ETQLA 118
Query: 173 TAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVN---PQFPYLLHLGIQ 228
T V + E+ F+PN VK + + + AIYFSR +PYN++ N Q Y H+GI
Sbjct: 119 TLVKKIDDEEELFNPNVVKVIFNRYHQAIYFSRATLPYNRNIPQNQWLQQHDYFKHIGIY 178
Query: 229 SYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESF 288
+Y S+ L L + L+ E LEQL+ +ENGY +KV + H++ GVD PED+E++++
Sbjct: 179 AYRSDVLHEITLLEASALEKSESLEQLRWIENGYTIKVAETQHQSIGVDTPEDLERLKNL 238
>gi|436837290|ref|YP_007322506.1| 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO
synthetase) [Fibrella aestuarina BUZ 2]
gi|384068703|emb|CCH01913.1| 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO
synthetase) [Fibrella aestuarina BUZ 2]
Length = 247
Score = 187 bits (475), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 103/245 (42%), Positives = 150/245 (61%), Gaps = 14/245 (5%)
Query: 50 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQF 109
++GIIPAR+ S+RF GK LV+I GK MI+R E+++ AT+L +VVATDDE+I E F
Sbjct: 3 ILGIIPARYGSTRFPGKALVDIHGKSMIRRVVEQARQATSLTDVVVATDDERIREHVAAF 62
Query: 110 GADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
GA V+MTS ++GT+RC E + +++ Y VVNIQGDEP I+PE ID + L +
Sbjct: 63 GATVVMTSPHHQSGTDRCQEVVAQVDGAYQYVVNIQGDEPFIQPEQIDRLTAVLDGTTE- 121
Query: 170 VFSTAVTSLK-PEDAFDPNRVKCVVDNH--GYAIYFSRGLIPYNKSGKVNPQ------FP 220
+T + + P +PN K V+ A+YFSR IPY + PQ
Sbjct: 122 -LATLIKRITDPAVLLNPNSPKVVISAGIVAEALYFSRQPIPYQRD---RPQAEWLQHHT 177
Query: 221 YLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPE 280
Y H+G+ +Y ++ L L P+ L+ E LEQL+ LENG++++V++ + E G+D PE
Sbjct: 178 YFKHIGLYAYRTDVLAQITQLPPSSLERAEALEQLRWLENGFRIRVVETELETVGIDTPE 237
Query: 281 DVEKI 285
D+EKI
Sbjct: 238 DLEKI 242
>gi|419839706|ref|ZP_14363111.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Haemophilus
haemolyticus HK386]
gi|386909129|gb|EIJ73806.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Haemophilus
haemolyticus HK386]
Length = 254
Score = 187 bits (475), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 108/247 (43%), Positives = 150/247 (60%), Gaps = 11/247 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPARFASSR GKPL +I GKPMIQ +E++ L + +++ATD+E +A+ + FGA+
Sbjct: 6 IIPARFASSRLPGKPLADIAGKPMIQHVFEKA-LQSGASRVIIATDNENVADVAKSFGAE 64
Query: 113 VIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS + +GTER E ++KL +I+VNIQGDEPLI P I+ V L +
Sbjct: 65 VCMTSVNHNSGTERLAEVVEKLAIPDNEIIVNIQGDEPLIPPVIVRQVADNLAKFNVNMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS--------GKVNPQFPYLL 223
S AV E+ F+PN VK + D GY +YFSR +IPY++ KV YL
Sbjct: 125 SLAVKIHDAEELFNPNAVKVLTDKEGYVLYFSRSVIPYDRDQFMNLHNVQKVQLADAYLR 184
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDV 282
H+GI +Y + F+K Y PT L+ E LEQL+VL NG ++ V + + A GVD ED+
Sbjct: 185 HIGIYAYRAGFIKQYVQWAPTQLENLEKLEQLRVLYNGERIHVELAKEVPAVGVDTAEDL 244
Query: 283 EKIESFM 289
EK+ + +
Sbjct: 245 EKVRAIL 251
>gi|146293223|ref|YP_001183647.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Shewanella
putrefaciens CN-32]
gi|226724336|sp|A4Y7B5.1|KDSB_SHEPC RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|145564913|gb|ABP75848.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shewanella
putrefaciens CN-32]
Length = 245
Score = 187 bits (475), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 104/241 (43%), Positives = 146/241 (60%), Gaps = 8/241 (3%)
Query: 50 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQF 109
V+ +IPAR+ SSRF GKPL I GKPMIQ +ER+ LA L ++ VATDDE+I + F
Sbjct: 3 VILLIPARYGSSRFPGKPLAPINGKPMIQHVYERASLAKGLTNIYVATDDERIKATVEGF 62
Query: 110 GADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
G V+MTS +GT+R NEA++ L K D+V+N+QGD+PLI+P I+ ++ + P
Sbjct: 63 GGKVVMTSPDAASGTDRINEAIKLLGLKDDDLVINVQGDQPLIDPTAIEQLINLFERQP- 121
Query: 169 AVFSTAVTS---LKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHL 225
F A + D DP +VK V DN+ YA+YFSR IP+ G+ +P HL
Sbjct: 122 GEFEMATLGYEIVNKADIDDPMQVKMVFDNNYYALYFSRSRIPF---GRDTQDYPVFKHL 178
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKI 285
GI +Y S F++ + L L+ E LEQL+ LE+G+K+K+ + VD PED+ K
Sbjct: 179 GIYAYTSKFVQTFAALPLGRLEDLEKLEQLRALEHGHKIKIAISASNSLEVDRPEDIHKC 238
Query: 286 E 286
E
Sbjct: 239 E 239
>gi|282879018|ref|ZP_06287780.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Prevotella
buccalis ATCC 35310]
gi|281298853|gb|EFA91260.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Prevotella
buccalis ATCC 35310]
Length = 250
Score = 187 bits (475), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 103/245 (42%), Positives = 152/245 (62%), Gaps = 7/245 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ GIIPAR+ SSRF GKPL + GK +IQR +E +++ L+ VATDD++I +
Sbjct: 2 KFTGIIPARYGSSRFPGKPLAMLGGKTVIQRVYE--QVSQVLEDAFVATDDQRIFDAVTA 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG +MTS + ++GT+R EA+++L D+V+NIQGDEP I+ + I+ + +
Sbjct: 60 FGGKAVMTSANHQSGTDRIEEAVEQLGLTCDVVLNIQGDEPFIQRQQIETLCHCFDNSKT 119
Query: 169 AVFSTAVTSLKPEDAFD-PNRVKCVVDNHGYAIYFSRGLIPY--NKSG-KVNPQFPYLLH 224
+ +T + + A + PN K VVD GYA+YFSR +IP+ NK G + Q+P+L H
Sbjct: 120 QI-ATLGKRFESQKALENPNSPKIVVDKDGYALYFSRSVIPFIRNKKGDEWMSQYPFLKH 178
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEK 284
LGI +Y LK L + L+L E LEQL+ L+NGY++KV D E G+D PED+E+
Sbjct: 179 LGIYAYRREVLKEITHLPQSSLELAESLEQLRWLQNGYRIKVGLTDIETVGIDTPEDLER 238
Query: 285 IESFM 289
E F+
Sbjct: 239 AERFL 243
>gi|315608202|ref|ZP_07883194.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Prevotella
buccae ATCC 33574]
gi|315250171|gb|EFU30168.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Prevotella
buccae ATCC 33574]
Length = 243
Score = 187 bits (475), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 98/244 (40%), Positives = 150/244 (61%), Gaps = 5/244 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR+AS+RF GKPL + GK +IQR +E+ K LD + VATDD +I +
Sbjct: 2 KFIGIIPARYASTRFPGKPLAMLGGKSVIQRVYEQVK--DVLDDVYVATDDRRIFDMVLS 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
F V+MTS S ++GT+R EA++K+ +D++VN+QGDEP I+ E ++ V + +
Sbjct: 60 FEGKVVMTSSSHQSGTDRIAEAIEKIGGDWDVIVNVQGDEPFIQREQVEAVCRCFEDEST 119
Query: 169 AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVN---PQFPYLLHL 225
+ + E + N K VVDN G+A+YFSR +IP+ ++ + N +FP+L H+
Sbjct: 120 QIATLGKPFATMEAVRNVNSPKIVVDNQGFAMYFSRSVIPFVRNVEENEWIERFPFLKHI 179
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKI 285
G+ +Y LK L + L+ E LEQL+ L+NGYK+KV D E G+D PED+++
Sbjct: 180 GVYAYRKEVLKNITKLPQSSLEKAESLEQLRWLQNGYKIKVGLTDIETVGIDTPEDLKRA 239
Query: 286 ESFM 289
E +
Sbjct: 240 EQLI 243
>gi|417840847|ref|ZP_12486955.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Haemophilus
haemolyticus M19501]
gi|341950658|gb|EGT77245.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Haemophilus
haemolyticus M19501]
Length = 254
Score = 187 bits (475), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 108/247 (43%), Positives = 151/247 (61%), Gaps = 11/247 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPARFASSR GKPL +I GKPMIQ +E++ L + +++ATD+E +A+ + FGA+
Sbjct: 6 IIPARFASSRLPGKPLADIAGKPMIQHVFEKA-LQSGASRVIIATDNENVADVAKSFGAE 64
Query: 113 VIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS + +GTER E ++KL +I+VNIQGDEPLI P I+ V L +
Sbjct: 65 VCMTSVNHNSGTERLAEVVEKLAIPDNEIIVNIQGDEPLIPPIIVRQVADNLAKFNVNMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ--------FPYLL 223
S AV E+ F+PN VK + D GY +YFSR +IPY++ +N Q YL
Sbjct: 125 SLAVKIHDAEELFNPNAVKVLTDKDGYVLYFSRSVIPYDREQFMNLQDVQKVQLADAYLR 184
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDV 282
H+GI +Y + F+K Y PT L+ E LEQL+VL NG ++ V + + A GVD ED+
Sbjct: 185 HIGIYAYRAGFIKQYVQWAPTQLENLEKLEQLRVLYNGERIHVELAKEVPAVGVDTAEDL 244
Query: 283 EKIESFM 289
EK+ + +
Sbjct: 245 EKVRAIL 251
>gi|347756646|ref|YP_004864209.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Candidatus
Chloracidobacterium thermophilum B]
gi|347589163|gb|AEP13692.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Candidatus
Chloracidobacterium thermophilum B]
Length = 250
Score = 187 bits (474), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 94/239 (39%), Positives = 141/239 (58%), Gaps = 3/239 (1%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPAR+ ++R GKPL+++ G+PMIQR + R + ++ ++VATDD +IA+ QFG
Sbjct: 5 VAIIPARYDATRLPGKPLIDLAGQPMIQRVYARVRQVPEIEQVIVATDDPRIADAVVQFG 64
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAV 170
+ MT +GT+R E L+ +I+VN+QGDEPLI PE I + +Q+ PD
Sbjct: 65 GEARMTRADHLSGTDRIAEVAATLDA--EIIVNVQGDEPLIAPETITAALHPVQSEPDLP 122
Query: 171 FSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSY 230
+T L+ DA +P+ VK V D G A+YFSR IPY + + + H G+ Y
Sbjct: 123 LATTCEPLEAADAENPHVVKVVCDAQGNALYFSRAPIPYPRQPDIARTL-WRKHTGLYVY 181
Query: 231 DSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFM 289
L L P PL+L E LEQL+ L +G +++V++ H A GVD P+DV ++ ++
Sbjct: 182 RRRALLHLTALPPAPLELAEGLEQLRALTHGLRIRVVETKHRAIGVDTPDDVVRVRQWL 240
>gi|332296219|ref|YP_004438142.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Thermodesulfobium
narugense DSM 14796]
gi|332179322|gb|AEE15011.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Thermodesulfobium
narugense DSM 14796]
Length = 245
Score = 187 bits (474), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 152/244 (62%), Gaps = 5/244 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+++G+IP+R S+R KPL IL KPMIQ +E + + L +LV+ATD E IA
Sbjct: 3 KILGVIPSRLKSTRLPEKPLRKILNKPMIQWVYEGASKSNLLSNLVIATDSEAIANIATT 62
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FGA +MTS+SCR+GT+R E + K+ YDI+VNIQGDEP++ I++ +++ + +
Sbjct: 63 FGAKTLMTSKSCRSGTDRVAE-VAKMLTDYDIIVNIQGDEPMVNDVIVNALIEPF-SDKE 120
Query: 169 AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQ 228
++ +T++KPE+ DP VK V + A+YFSR IP+++ G ++ HLG
Sbjct: 121 VNMTSLMTTIKPEEESDPAVVKVVCKKNMDALYFSRYSIPFDRDGIGITRYK---HLGFY 177
Query: 229 SYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESF 288
+Y +FL + L PTPL+ E LEQL+VLENG+ +++ + VD ED+ ++E
Sbjct: 178 AYKRDFLLMISSLPPTPLEKAESLEQLRVLENGFSIRMNLIPFSTKSVDTIEDLIEVERI 237
Query: 289 MRER 292
++E+
Sbjct: 238 IKEK 241
>gi|120598699|ref|YP_963273.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Shewanella sp.
W3-18-1]
gi|386313640|ref|YP_006009805.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shewanella
putrefaciens 200]
gi|226724340|sp|A1RJ74.1|KDSB_SHESW RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|120558792|gb|ABM24719.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shewanella sp.
W3-18-1]
gi|319426265|gb|ADV54339.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shewanella
putrefaciens 200]
Length = 245
Score = 187 bits (474), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 104/241 (43%), Positives = 146/241 (60%), Gaps = 8/241 (3%)
Query: 50 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQF 109
V+ +IPAR+ SSRF GKPL I GKPMIQ +ER+ LA L ++ VATDDE+I + F
Sbjct: 3 VILLIPARYGSSRFPGKPLAPINGKPMIQHVYERASLAKGLTNIYVATDDERIKATVEGF 62
Query: 110 GADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
G V+MTS +GT+R NEA++ L K D+V+N+QGD+PLI+P I+ ++ + P
Sbjct: 63 GGKVVMTSPDAASGTDRINEAIKLLGLKDDDLVINVQGDQPLIDPTAIEQLINLFERQP- 121
Query: 169 AVFSTAVTS---LKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHL 225
F A + D DP +VK V DN+ YA+YFSR IP+ G+ +P HL
Sbjct: 122 GEFEMATLGYEIVNKADIDDPMQVKMVFDNNYYALYFSRSRIPF---GRDTQDYPVFKHL 178
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKI 285
GI +Y S F++ + L L+ E LEQL+ LE+G+K+K+ + VD PED+ K
Sbjct: 179 GIYAYTSKFVQTFAALPLGRLEDLEKLEQLRALEHGHKIKIAISASNSLEVDRPEDIHKC 238
Query: 286 E 286
E
Sbjct: 239 E 239
>gi|40890001|pdb|1VIC|A Chain A, Crystal Structure Of Cmp-kdo Synthetase
gi|40890002|pdb|1VIC|B Chain B, Crystal Structure Of Cmp-kdo Synthetase
Length = 262
Score = 187 bits (474), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 108/247 (43%), Positives = 151/247 (61%), Gaps = 11/247 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPARFASSR GKPL +I GKPMIQ +E++ L + +++ATD+E +A+ + FGA+
Sbjct: 6 IIPARFASSRLPGKPLADIKGKPMIQHVFEKA-LQSGASRVIIATDNENVADVAKSFGAE 64
Query: 113 VIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS + +GTER E ++KL +I+VNIQGDEPLI P I+ V L +
Sbjct: 65 VCMTSVNHNSGTERLAEVVEKLAIPDNEIIVNIQGDEPLIPPVIVRQVADNLAKFNVNMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ--------FPYLL 223
S AV E+ F+PN VK + D GY +YFSR +IPY++ +N Q YL
Sbjct: 125 SLAVKIHDAEELFNPNAVKVLTDKDGYVLYFSRSVIPYDRDQFMNLQDVQKVQLSDAYLR 184
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDV 282
H+GI +Y + F+K Y PT L+ E LEQL+VL NG ++ V + + A GVD ED+
Sbjct: 185 HIGIYAYRAGFIKQYVQWAPTQLENLEKLEQLRVLYNGERIHVELAKEVPAVGVDTAEDL 244
Query: 283 EKIESFM 289
EK+ + +
Sbjct: 245 EKVRAIL 251
>gi|410448652|ref|ZP_11302725.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira sp.
Fiocruz LV3954]
gi|410017482|gb|EKO79541.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira sp.
Fiocruz LV3954]
gi|456876474|gb|EMF91565.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
santarosai str. ST188]
Length = 246
Score = 187 bits (474), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 107/246 (43%), Positives = 141/246 (57%), Gaps = 7/246 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+++GIIPAR+ASSRF GKPL I K MI+ T+ + +T L LVVATDD +I + Q
Sbjct: 3 KILGIIPARYASSRFPGKPLAKIGDKTMIEWTYRNASRSTVLSELVVATDDIRIHKVVQD 62
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG + +MT +GT+R E + +Y ++VNIQGDEP IEPE+IDGV + P+
Sbjct: 63 FGGNSVMTKADHISGTDRIIEVANRF-SEYSVIVNIQGDEPGIEPELIDGVASLKVSHPE 121
Query: 169 AVFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
STA L DPNRVK ++D +G AIYFSR LIP + P HLGI
Sbjct: 122 WEMSTAAVPLFDFSHGEDPNRVKVIIDRNGKAIYFSRSLIP----SQFKKNVPLYRHLGI 177
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVE-KIE 286
YD +FL Y L + L+ E LEQL+ +E GY + V VD P D+E IE
Sbjct: 178 YGYDRDFLLKYDSLPKSNLEESESLEQLRAIEAGYGIGVYLAREAGLSVDTPADLEIVIE 237
Query: 287 SFMRER 292
F + +
Sbjct: 238 DFKKRK 243
>gi|16272032|ref|NP_438231.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Haemophilus
influenzae Rd KW20]
gi|260580638|ref|ZP_05848465.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Haemophilus
influenzae RdAW]
gi|1170638|sp|P44490.2|KDSB_HAEIN RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|1573006|gb|AAC21736.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase (kdsB)
[Haemophilus influenzae Rd KW20]
gi|260092700|gb|EEW76636.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Haemophilus
influenzae RdAW]
Length = 254
Score = 187 bits (474), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 108/247 (43%), Positives = 151/247 (61%), Gaps = 11/247 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPARFASSR GKPL +I GKPMIQ +E++ L + +++ATD+E +A+ + FGA+
Sbjct: 6 IIPARFASSRLPGKPLADIKGKPMIQHVFEKA-LQSGASRVIIATDNENVADVAKSFGAE 64
Query: 113 VIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS + +GTER E ++KL +I+VNIQGDEPLI P I+ V L +
Sbjct: 65 VCMTSVNHNSGTERLAEVVEKLAIPDNEIIVNIQGDEPLIPPVIVRQVADNLAKFNVNMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ--------FPYLL 223
S AV E+ F+PN VK + D GY +YFSR +IPY++ +N Q YL
Sbjct: 125 SLAVKIHDAEELFNPNAVKVLTDKDGYVLYFSRSVIPYDRDQFMNLQDVQKVQLSDAYLR 184
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDV 282
H+GI +Y + F+K Y PT L+ E LEQL+VL NG ++ V + + A GVD ED+
Sbjct: 185 HIGIYAYRAGFIKQYVQWAPTQLENLEKLEQLRVLYNGERIHVELAKEVPAVGVDTAEDL 244
Query: 283 EKIESFM 289
EK+ + +
Sbjct: 245 EKVRAIL 251
>gi|345882948|ref|ZP_08834400.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Prevotella sp.
C561]
gi|345044285|gb|EGW48328.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Prevotella sp.
C561]
Length = 246
Score = 186 bits (473), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 151/244 (61%), Gaps = 5/244 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR++SSRF GKPL + GKP+I+ + ++++ ++ + VATDD++I + +
Sbjct: 2 KFIGIIPARYSSSRFPGKPLAILGGKPVIEHVYR--QVSSVMEDVFVATDDQRIYDAVEA 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG IMT ++GT+R EAL+K++ +DIV+NIQGDEP I+ ++ V++
Sbjct: 60 FGGKAIMTRSDHQSGTDRICEALEKVDGSFDIVINIQGDEPFIQKSQLETVMQCFDDPRT 119
Query: 169 AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVN---PQFPYLLHL 225
+ + E +PN K V+DN GYA+YFSR +IP+ + + FPYL H+
Sbjct: 120 QIATLGKPFESMEAVENPNSPKIVLDNDGYALYFSRSVIPFVRGKEREEWLSHFPYLKHI 179
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKI 285
G+ +Y + L+ L + L+L E LEQL+ L+NGYK+KV D E G+D PED+++
Sbjct: 180 GLYAYRTEVLREVSKLPQSTLELAESLEQLRWLQNGYKIKVGLTDVETIGIDTPEDLQRA 239
Query: 286 ESFM 289
E M
Sbjct: 240 EEKM 243
>gi|148827212|ref|YP_001291965.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Haemophilus
influenzae PittGG]
gi|166220466|sp|A5UFM6.1|KDSB_HAEIG RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|148718454|gb|ABQ99581.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Haemophilus
influenzae PittGG]
Length = 254
Score = 186 bits (473), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 109/247 (44%), Positives = 151/247 (61%), Gaps = 11/247 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPARFASSR GKPL +I GKPMIQ +E++ L + + +++ATD+E +A+ + FGA+
Sbjct: 6 IIPARFASSRLPGKPLADIAGKPMIQHVFEKA-LQSGANRVIIATDNENVADVVKNFGAE 64
Query: 113 VIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS + +GTER E ++KL +I+VNIQGDEPLI P I+ V L +
Sbjct: 65 VCMTSVNHNSGTERLAEVVEKLAIPDNEIIVNIQGDEPLIPPVIVRQVADNLAKFNVNMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ--------FPYLL 223
S AV E+ F+PN VK + D GY +YFSR +IPY++ +N Q YL
Sbjct: 125 SLAVKIHDGEELFNPNAVKVLTDKDGYVLYFSRSVIPYDRDQFMNLQDVQKVQLADAYLR 184
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDV 282
H+GI +Y S F+K Y PT L+ E LEQL+VL NG ++ V + + A GVD ED+
Sbjct: 185 HIGIYAYRSGFIKQYMQWAPTQLENLEKLEQLRVLYNGERIHVELAKEVPAVGVDTAEDL 244
Query: 283 EKIESFM 289
EK+ +
Sbjct: 245 EKVRLIL 251
>gi|46581517|ref|YP_012325.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Desulfovibrio
vulgaris str. Hildenborough]
gi|387154722|ref|YP_005703658.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Desulfovibrio
vulgaris RCH1]
gi|81566189|sp|Q726J3.1|KDSB_DESVH RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|46450939|gb|AAS97585.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Desulfovibrio
vulgaris str. Hildenborough]
gi|311235166|gb|ADP88020.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Desulfovibrio
vulgaris RCH1]
Length = 252
Score = 186 bits (473), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 99/244 (40%), Positives = 149/244 (61%), Gaps = 3/244 (1%)
Query: 52 GIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGA 111
GIIPAR+ASSRF GKPL ILG+PM ++R++ D + +ATDD +IA+ G
Sbjct: 9 GIIPARYASSRFPGKPLAEILGRPMFWHVYDRARRCAAFDEVALATDDARIADAANVLGV 68
Query: 112 DVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAV 170
+MT+E +GT+R +EA +L D +VVNIQGDEP ++P ++D +V A V
Sbjct: 69 PCVMTAEHHPSGTDRVHEAAMRLGVPDDAVVVNIQGDEPALDPRMLDQLVAPFADASVRV 128
Query: 171 FSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLL-HLGIQS 229
+T +L ++A P+RVK VV +G A+YFSR IP+ + G V L H+G+ +
Sbjct: 129 -ATLAMALSAQEAQSPDRVKVVVAANGDALYFSRADIPFVRDGDVGGDTAGRLGHIGLYA 187
Query: 230 YDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFM 289
+ L+ + L P+ L+ E LEQL++LENG ++V+ + HGVD PED++ I + +
Sbjct: 188 FRMEALRRFTQLPPSRLEQTEKLEQLRLLENGIAIRVVPTTYRTHGVDRPEDIDVIINLL 247
Query: 290 RERN 293
RE +
Sbjct: 248 REND 251
>gi|336402040|ref|ZP_08582784.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bacteroides sp.
1_1_30]
gi|335947642|gb|EGN09427.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bacteroides sp.
1_1_30]
Length = 250
Score = 186 bits (473), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 105/254 (41%), Positives = 155/254 (61%), Gaps = 16/254 (6%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR+AS+RF KPL + GK +IQR +E ++A L+ VATDDE+I +
Sbjct: 2 KFLGIIPARYASTRFPAKPLAMLGGKTVIQRVYE--QVAGVLNDAYVATDDERIEAAVKA 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG V+MTS ++GT+RC EA K+ +D+VVNIQGDEP I+P +D A++A +
Sbjct: 60 FGGKVVMTSVHHKSGTDRCYEACTKIGGDFDVVVNIQGDEPFIQPSQLD----AVKACFE 115
Query: 169 AVFSTAVTSLKPEDAFDP-------NRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF-- 219
V + T +KP A +P N K VV+ + A+YFSR +IPY ++ +
Sbjct: 116 DVTTQIATLVKPFTADEPFAVLENVNSPKVVVNKNWNALYFSRSIIPYQRNAEKQDWLKG 175
Query: 220 -PYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDA 278
Y H+G+ +Y ++ LK L + L+L E LEQL+ LENGYK+KV + E G+D
Sbjct: 176 HTYYKHIGLYAYRTDVLKEITMLPQSSLELAESLEQLRWLENGYKIKVGISEVETIGIDT 235
Query: 279 PEDVEKIESFMRER 292
P+D+E+ E F++ R
Sbjct: 236 PQDLERAEEFLKNR 249
>gi|85861009|ref|YP_463211.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Syntrophus
aciditrophicus SB]
gi|123517887|sp|Q2LY80.1|KDSB_SYNAS RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|85724100|gb|ABC79043.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Syntrophus
aciditrophicus SB]
Length = 248
Score = 186 bits (473), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 97/243 (39%), Positives = 150/243 (61%), Gaps = 4/243 (1%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
++V IIP+R++SSRF+GKPL ++ GKPMIQ +ER + + + VATDD +I E ++
Sbjct: 3 KIVCIIPSRYSSSRFQGKPLADLCGKPMIQHVYERVLKSELVSYAAVATDDSRIFEAVRK 62
Query: 109 FGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
FG IMT+ R+GT+R EA+ L+ K DIVVN+QGD+P+ EPE I V + L+ P
Sbjct: 63 FGGKAIMTAARHRSGTDRIAEAVNSLDLKDDDIVVNVQGDQPIFEPEQIAEVTRPLREDP 122
Query: 168 DAVFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLG 226
+T + + + E+ PN VK V D + A+YFSR IPY + + +P Y H G
Sbjct: 123 SLPMATLIYRIVREEEITHPNAVKVVFDRNFNALYFSRATIPYVRDDR-HP-IAYYKHHG 180
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIE 286
I +Y FL+ + L ++ E LEQL+ LE GY+++V++ H++ VD PE++ ++
Sbjct: 181 IYAYRRAFLRTFTALEEGTMERLESLEQLRALEFGYRIRVVETLHDSVEVDTPEELARVR 240
Query: 287 SFM 289
+
Sbjct: 241 DIL 243
>gi|423231516|ref|ZP_17217919.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bacteroides dorei
CL02T00C15]
gi|423246103|ref|ZP_17227176.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bacteroides dorei
CL02T12C06]
gi|392627146|gb|EIY21185.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bacteroides dorei
CL02T00C15]
gi|392636735|gb|EIY30615.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bacteroides dorei
CL02T12C06]
Length = 252
Score = 186 bits (473), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 101/251 (40%), Positives = 153/251 (60%), Gaps = 10/251 (3%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR+AS+RF KPL + GKP+IQR +E ++A LD VATDDE+I +
Sbjct: 2 KFIGIIPARYASTRFPAKPLAILGGKPVIQRVYE--QVAGILDEAYVATDDERIESAVKA 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG V+MTS ++GT+RC EA K+ + YD+VVNIQGDEP I+ ++ V + +
Sbjct: 60 FGGKVVMTSVHHKSGTDRCYEAYTKVGQGYDVVVNIQGDEPFIQRSQLEAVKACFEDSAT 119
Query: 169 AVFSTAVTSLKPEDAFDP----NRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF---PY 221
+ +T V PED F+ N K VV+ + A+YFSR +IP+ ++ + Y
Sbjct: 120 QI-ATLVKPFTPEDGFEALENVNSPKVVVNKNMNALYFSRSVIPFQRNAEKEGWLKGHTY 178
Query: 222 LLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPED 281
H+G+ + ++ LK L + L+L E LEQL+ LENGY +KV + E G+D P+D
Sbjct: 179 YKHIGLYACRADVLKEITSLPQSSLELAESLEQLRWLENGYTIKVGISEVETIGIDTPQD 238
Query: 282 VEKIESFMRER 292
+ + E+F+++R
Sbjct: 239 LARAEAFLKQR 249
>gi|427413934|ref|ZP_18904125.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Veillonella
ratti ACS-216-V-Col6b]
gi|425714975|gb|EKU77974.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Veillonella
ratti ACS-216-V-Col6b]
Length = 243
Score = 186 bits (473), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 142/244 (58%), Gaps = 4/244 (1%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
++ +IPAR+AS+R GKPL +I GKPMIQR +E+ A D ++VATDD ++ + Q
Sbjct: 2 KIACVIPARYASTRLPGKPLADIAGKPMIQRVYEQVAKAAVPDEVIVATDDARVFDVVQA 61
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG IMT GT+R E + + D+++N+QGDEPLI P++ID + +
Sbjct: 62 FGGTAIMTKVDHLTGTDRLAE-VAEARPDIDVIINVQGDEPLIAPDLIDSLGALFRTDEA 120
Query: 169 AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQ 228
+T L + +P+ VK + + G A+YFSR LIPY ++ VN L H+GI
Sbjct: 121 LKMATVGAPLNEAEYNEPSAVKVICNLKGQAMYFSRSLIPYPRNAFVNAP---LKHIGIY 177
Query: 229 SYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESF 288
+Y FL + + PTP +L E LEQL+ LENG ++VIK D GVD PED+ +
Sbjct: 178 AYTREFLLEFAKMAPTPAELTESLEQLRALENGVTIQVIKTDARFIGVDTPEDLAAVNEI 237
Query: 289 MRER 292
+++
Sbjct: 238 FKKQ 241
>gi|345429917|ref|YP_004823036.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Haemophilus
parainfluenzae T3T1]
gi|301155979|emb|CBW15449.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Haemophilus
parainfluenzae T3T1]
Length = 254
Score = 186 bits (473), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 107/247 (43%), Positives = 151/247 (61%), Gaps = 11/247 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPARFASSR GKPL +I GKPMIQ +E+++ + +++ATD+E++ + + FGA+
Sbjct: 6 IIPARFASSRLPGKPLADIAGKPMIQHVFEKAQ-QSGASRVIIATDNEQVEKAAKAFGAE 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTSE+ +GTER E + KL D I+VNIQGDEPLI P I+ V + L +
Sbjct: 65 VCMTSEAHNSGTERLAEVVSKLGIADDEIIVNIQGDEPLIPPVIVSQVAENLAKFNVNMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK--------SGKVNPQFPYLL 223
+ AV + E+ F+PN VK V D GY +YFSR +IPY++ + K YL
Sbjct: 125 TLAVKIHEAEELFNPNAVKVVTDKDGYVLYFSRSVIPYDRDQFMQLADTSKAQLADAYLR 184
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDV 282
H+GI +Y + F+K Y PT L+ E LEQL+VL G ++ V + + A GVD ED+
Sbjct: 185 HIGIYAYRAGFIKQYVQWAPTQLENLEKLEQLRVLWYGERIHVELAKEVPAVGVDTAEDL 244
Query: 283 EKIESFM 289
EK+ S +
Sbjct: 245 EKVRSIL 251
>gi|427406256|ref|ZP_18896461.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Selenomonas sp.
F0473]
gi|425709097|gb|EKU72136.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Selenomonas sp.
F0473]
Length = 244
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 99/235 (42%), Positives = 141/235 (60%), Gaps = 6/235 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+V+ IIPAR+AS+R GKPL +I GKPMI R +ER+ A + +VVATDDE+I +
Sbjct: 2 KVLCIIPARYASTRLPGKPLRDIAGKPMIVRVYERAVEARLVRDVVVATDDERIRAAVEA 61
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
G +MT GT+R E ++ YD+VVN+QGDEPLIEP +ID +++ A +
Sbjct: 62 HGGRAVMTRADHATGTDRLAEVAARM-TDYDLVVNVQGDEPLIEPAVIDALIEPFLADEN 120
Query: 169 AVFSTAVTSLK-PEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+T T ++ + +PN VK V D G A+YFSR IPY +S H+GI
Sbjct: 121 LSMATVKTEMRDAAEMENPNNVKVVTDAAGNALYFSRARIPYARSAGAK----VYKHIGI 176
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDV 282
+Y +FL Y + TPL++ E LEQL+ LENG +++V++ D GVD ED+
Sbjct: 177 YAYRRDFLLAYAKMPQTPLEISESLEQLRALENGCRIRVVETDAVFIGVDTEEDL 231
>gi|342904088|ref|ZP_08725890.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Haemophilus
haemolyticus M21621]
gi|342904610|ref|ZP_08726409.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Haemophilus
haemolyticus M21621]
gi|341953031|gb|EGT79545.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Haemophilus
haemolyticus M21621]
gi|341954097|gb|EGT80591.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Haemophilus
haemolyticus M21621]
Length = 254
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 108/247 (43%), Positives = 151/247 (61%), Gaps = 11/247 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPARFASSR GKPL +I GKPMIQ +E++ L + +++ATD+E +A+ + FGA+
Sbjct: 6 IIPARFASSRLPGKPLADIAGKPMIQHVFEKA-LQSGASRVIIATDNENVADVAKSFGAE 64
Query: 113 VIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS + +GTER E ++KL +I+VNIQGDEPLI P I+ V L +
Sbjct: 65 VCMTSVNHNSGTERLAEVVEKLAIPDNEIIVNIQGDEPLIPPIIVRQVADNLAKFNVNMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ--------FPYLL 223
S AV E+ F+PN VK + D GY +YFSR +IPY++ +N Q YL
Sbjct: 125 SLAVKIHDAEELFNPNVVKVLTDKDGYVLYFSRSVIPYDRDQFMNLQDVQKVQLADAYLR 184
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDV 282
H+GI +Y + F+K Y PT L+ E LEQL+VL NG ++ V + + A GVD ED+
Sbjct: 185 HIGIYAYRAGFIKQYVQWVPTQLENLEKLEQLRVLYNGERIHVELAKEVPAVGVDTAEDL 244
Query: 283 EKIESFM 289
EK+ + +
Sbjct: 245 EKVRAIL 251
>gi|408418708|ref|YP_006760122.1| 3-deoxy-manno-octulosonate cytidylyltransferase KdsB [Desulfobacula
toluolica Tol2]
gi|405105921|emb|CCK79418.1| KdsB: 3-deoxy-manno-octulosonate cytidylyltransferase
[Desulfobacula toluolica Tol2]
Length = 241
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 96/240 (40%), Positives = 145/240 (60%), Gaps = 4/240 (1%)
Query: 50 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQF 109
+ +IP+R+ SSRF+GKPL + GK MIQR +E+++ + T+ +VATDDE+I + F
Sbjct: 2 TIAVIPSRYGSSRFKGKPLALVAGKSMIQRVYEQAQKSRTVSKTIVATDDERIFNAVEAF 61
Query: 110 GADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
G +MTSE CR+GT+R + L D I+VNIQGD+P+ P ID ++ PD
Sbjct: 62 GGHAVMTSEDCRSGTDRVAQTAALLNLGPDEIIVNIQGDQPVFNPLTIDELISPFADDPD 121
Query: 169 AVFSTAVTSLKPE-DAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
V ST ++ E + DP VK D +G+A+YFSR IPY + + F HLG
Sbjct: 122 LVMSTLAFKIQDEREITDPKDVKVTFDRNGFALYFSRAQIPYPRDKETPADF--YKHLGF 179
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
+Y +FL L +P + E LEQL+VLE G+++KV+ +++ +D PED+++IE+
Sbjct: 180 YAYKKSFLDKLVTLPTSPCEHIEKLEQLRVLEFGFRIKVVITPYDSPEIDLPEDIKRIEA 239
>gi|152979384|ref|YP_001345013.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Actinobacillus
succinogenes 130Z]
gi|226724248|sp|A6VQ31.1|KDSB_ACTSZ RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|150841107|gb|ABR75078.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Actinobacillus
succinogenes 130Z]
Length = 259
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 108/251 (43%), Positives = 147/251 (58%), Gaps = 15/251 (5%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPARFASSR GKPL +I GKPMI+ WE+++ + +VVATD+E++ QFG +
Sbjct: 7 IIPARFASSRLPGKPLADIAGKPMIRHVWEKARRSGA-SRVVVATDNEQVKNAVLQFGGE 65
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTSE +GTER E ++KL+ D I+VNIQGDEPLI P I+ V L +
Sbjct: 66 VCMTSEKHNSGTERLAEVVEKLDIADDEIIVNIQGDEPLIPPVIVQQVAANLAKYRVNMA 125
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS------------GKVNPQF 219
S AV ++ F+PN VK + D GY +YFSR IP+N+ +
Sbjct: 126 SLAVKIEDVQELFNPNAVKVLTDQAGYVLYFSRAAIPWNRDEFADIAANTKNLDDLRLGD 185
Query: 220 PYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDA 278
YL H+GI +Y + F+K Y PT L+ E LEQL+VL G ++ V + + A GVD
Sbjct: 186 HYLRHIGIYAYRAGFIKRYVQWQPTALEKIESLEQLRVLWYGERIHVELAEEVPAVGVDT 245
Query: 279 PEDVEKIESFM 289
PED+EK+ S +
Sbjct: 246 PEDLEKVRSIL 256
>gi|148825662|ref|YP_001290415.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Haemophilus
influenzae PittEE]
gi|229846978|ref|ZP_04467084.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Haemophilus
influenzae 7P49H1]
gi|166220465|sp|A5UB81.1|KDSB_HAEIE RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|148715822|gb|ABQ98032.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Haemophilus
influenzae PittEE]
gi|229810062|gb|EEP45782.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Haemophilus
influenzae 7P49H1]
Length = 254
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 108/247 (43%), Positives = 150/247 (60%), Gaps = 11/247 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPARFASSR GKPL +I GKPMIQ +E++ L + +++ATD+E +A+ + FGA+
Sbjct: 6 IIPARFASSRLPGKPLADIAGKPMIQHVFEKA-LQSGASRVIIATDNENVADVAKNFGAE 64
Query: 113 VIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS + +GTER E ++KL +I+VNIQGDEPLI P I+ V L +
Sbjct: 65 VCMTSVNHNSGTERLAEVVEKLAIPDNEIIVNIQGDEPLIPPVIVRQVADNLAKFNVNMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF--------PYLL 223
S AV E+ F+PN VK + D GY +YFSR +IPY++ +N Q YL
Sbjct: 125 SLAVKIHDAEELFNPNAVKVLTDKDGYVLYFSRSVIPYDRDQFMNLQNVQKVQLADAYLR 184
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDV 282
H+GI +Y + F+K Y PT L+ E LEQL+VL NG ++ V + + A GVD ED+
Sbjct: 185 HIGIYAYRAGFIKQYVQWAPTQLENLEKLEQLRVLYNGERIHVELAKEVPAVGVDTAEDL 244
Query: 283 EKIESFM 289
EK+ +
Sbjct: 245 EKVRLIL 251
>gi|261210519|ref|ZP_05924812.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio sp. RC341]
gi|260840304|gb|EEX66875.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio sp. RC341]
Length = 252
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 110/249 (44%), Positives = 153/249 (61%), Gaps = 13/249 (5%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ S+R GKPL +I GKPMIQ +E++ A DH+++ATDDE++ + FG
Sbjct: 6 VIPARYQSTRLPGKPLADIGGKPMIQWVYEQAMQAGA-DHVIIATDDERVEQAVHAFGGV 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS ++GTER E ++K+ D IVVN+QGDEPLI P II V L AA A
Sbjct: 65 VCMTSSDHQSGTERLAEVVEKMAIPADHIVVNVQGDEPLIPPTIIRQVADNL-AACSAPM 123
Query: 172 STAVTSLKPE-DAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS--GKVNPQF--PYLLHLG 226
+T +K E + F+PN VK + D +GYA+YFSR IP+++ K + P L H+G
Sbjct: 124 ATLAVEIKDEAEVFNPNAVKVITDKNGYALYFSRATIPWDRDNFAKADKSIAQPLLRHIG 183
Query: 227 IQSYDSNFLKIYPGLHPTPLQLE--EDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVE 283
I +Y + F+ Y LH P QLE E LEQL+VL +G K+ V + ++ GVD PED+E
Sbjct: 184 IYAYRAGFINTY--LHWQPSQLEKIECLEQLRVLWHGEKIHVAVALEAPPAGVDTPEDLE 241
Query: 284 KIESFMRER 292
+ + ER
Sbjct: 242 MVRRIVTER 250
>gi|224539783|ref|ZP_03680322.1| hypothetical protein BACCELL_04692 [Bacteroides cellulosilyticus
DSM 14838]
gi|224518606|gb|EEF87711.1| hypothetical protein BACCELL_04692 [Bacteroides cellulosilyticus
DSM 14838]
Length = 250
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 103/249 (41%), Positives = 150/249 (60%), Gaps = 10/249 (4%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR+AS+RF KPL + GK +IQR +E+ +A LD VATDDE+I E +
Sbjct: 3 KFLGIIPARYASTRFPAKPLAMLGGKTVIQRVYEQ--VAGILDDAYVATDDERIEEAVKA 60
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG V+MTS + ++GT+RC EA K+ +D+VVNIQGDEP I+P ++ VKA
Sbjct: 61 FGGKVVMTSVNHKSGTDRCYEAYTKIGGDFDVVVNIQGDEPFIQPSQLE-TVKACFDDIT 119
Query: 169 AVFSTAVTSLKPEDAFDP----NRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF---PY 221
+T V PE+ F+ N K V++ + A+YFSR +IPY ++ + Y
Sbjct: 120 TQIATLVKPFTPENGFEALENINSPKVVLNKNMNALYFSRSIIPYQRNAEKQDWLKNHTY 179
Query: 222 LLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPED 281
H+G+ +Y + LK L + L+L E LEQL+ LENGY +K + E G+D P+D
Sbjct: 180 YKHIGLYAYRAEVLKEITSLPQSSLELAESLEQLRWLENGYTIKAGITEVETIGIDTPQD 239
Query: 282 VEKIESFMR 290
+EK E F++
Sbjct: 240 LEKAEEFLK 248
>gi|423218554|ref|ZP_17205050.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bacteroides caccae
CL03T12C61]
gi|392628057|gb|EIY22092.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bacteroides caccae
CL03T12C61]
Length = 250
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 103/252 (40%), Positives = 152/252 (60%), Gaps = 10/252 (3%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR+AS+RF KPL + GK +IQR +E ++A LD VATDDE+I +
Sbjct: 2 KFLGIIPARYASTRFPAKPLAILGGKTVIQRVYE--QVAGVLDDAYVATDDERIEAAVKA 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG V+MTS ++GT+RC EA K+ +D+VVNIQGDEP I+P ++ VK P
Sbjct: 60 FGGKVVMTSVDHKSGTDRCYEACTKIGGDFDVVVNIQGDEPFIQPSQLNA-VKVCFEDPT 118
Query: 169 AVFSTAVTSLKPEDAF----DPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF---PY 221
+T V ++ F + N K VV+ + A+YFSR +IPY ++ + Y
Sbjct: 119 TQIATLVKPFTADEPFAVLENVNSPKVVVNKNWNALYFSRSIIPYQRNTEKQDWLKGHTY 178
Query: 222 LLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPED 281
H+G+ +Y ++ LK L + L+L E LEQL+ LENGYK+KV + E G+D P+D
Sbjct: 179 YKHIGLYAYRTDVLKEITALPQSSLELAESLEQLRWLENGYKIKVGISEVETIGIDTPQD 238
Query: 282 VEKIESFMRERN 293
+E+ E F++ R+
Sbjct: 239 LERAEEFLKSRS 250
>gi|387791272|ref|YP_006256337.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Solitalea
canadensis DSM 3403]
gi|379654105|gb|AFD07161.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Solitalea
canadensis DSM 3403]
Length = 241
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 101/242 (41%), Positives = 146/242 (60%), Gaps = 6/242 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIP+R+ S+RF GKPLV I GK MI+R +E+ KL LD +VVATDD++I +
Sbjct: 2 KFLGIIPSRYQSTRFPGKPLVEIKGKSMIRRVYEQCKLCQELDEVVVATDDQRIYDHVIA 61
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG ++TSE NGT RC E + Y++V+NIQGDEP I P+ I ++
Sbjct: 62 FGGKAMLTSEDHLNGTSRCAEVAEAF-PDYEVVINIQGDEPFISPKQISDLIHCFDDKET 120
Query: 169 AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGK----VNPQFPYLLH 224
+ S +PE+ FDP+ K V++ G A++FSR IP+ ++ +N Q Y H
Sbjct: 121 ELASMYKKIKQPEEVFDPHVAKVVMNLKGEALFFSRSPIPFLRNVAEHEWLNKQ-DYYYH 179
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEK 284
+GI Y S L L P+PL+L E LEQL+ LE G+K+K+ + D + +D PED+EK
Sbjct: 180 VGIYGYKSAVLFQLINLDPSPLELSESLEQLRWLEYGFKIKMAETDIDTIAIDTPEDLEK 239
Query: 285 IE 286
I+
Sbjct: 240 IK 241
>gi|145633380|ref|ZP_01789110.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Haemophilus
influenzae 3655]
gi|229845396|ref|ZP_04465527.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Haemophilus
influenzae 6P18H1]
gi|144985943|gb|EDJ92545.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Haemophilus
influenzae 3655]
gi|229811704|gb|EEP47402.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Haemophilus
influenzae 6P18H1]
Length = 254
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 108/247 (43%), Positives = 150/247 (60%), Gaps = 11/247 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPARFASSR GKPL +I GKPMIQ +E++ L + +++ATD+E +A+ + FGA+
Sbjct: 6 IIPARFASSRLPGKPLADIAGKPMIQHVFEKA-LQSGASRVIIATDNENVADVAKNFGAE 64
Query: 113 VIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS + +GTER E ++KL +I+VNIQGDEPLI P I+ V L +
Sbjct: 65 VCMTSVNHNSGTERLAEVVEKLAIPDNEIIVNIQGDEPLIPPVIVRQVADNLAKFNVNMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ--------FPYLL 223
S AV E+ F+PN VK + D GY +YFSR +IPY++ +N Q YL
Sbjct: 125 SLAVKIHDAEELFNPNAVKVLTDKDGYVLYFSRSVIPYDRDQFMNLQDVQKVQLADAYLR 184
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDV 282
H+GI +Y + F+K Y PT L+ E LEQL+VL NG ++ V + + A GVD ED+
Sbjct: 185 HIGIYAYRAGFIKQYVQWAPTQLENLEKLEQLRVLYNGERIHVELAKEVPAVGVDTAEDL 244
Query: 283 EKIESFM 289
EK+ +
Sbjct: 245 EKVRLIL 251
>gi|418720098|ref|ZP_13279296.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
borgpetersenii str. UI 09149]
gi|418735376|ref|ZP_13291787.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
borgpetersenii serovar Castellonis str. 200801910]
gi|421095441|ref|ZP_15556154.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
borgpetersenii str. 200801926]
gi|410362151|gb|EKP13191.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
borgpetersenii str. 200801926]
gi|410743076|gb|EKQ91819.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
borgpetersenii str. UI 09149]
gi|410748997|gb|EKR01890.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
borgpetersenii serovar Castellonis str. 200801910]
gi|456890713|gb|EMG01508.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
borgpetersenii str. 200701203]
Length = 246
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 107/249 (42%), Positives = 143/249 (57%), Gaps = 7/249 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+++G+IPAR+ASSRF GKPL I K MI+ T+ + +T L LVVATDD +I E Q
Sbjct: 3 KILGVIPARYASSRFPGKPLAKIGDKTMIEWTYRNASRSTALSELVVATDDTRIHEVVQG 62
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG + +MT +GT+R E + L +Y I++NIQGDEP IEPE+IDGV + P+
Sbjct: 63 FGGNSVMTRADHISGTDRIIE-VANLFSEYSIIINIQGDEPGIEPELIDGVAGLKASHPE 121
Query: 169 AVFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
STA L DPNRVK ++D + AIYFSR LIP + P HLGI
Sbjct: 122 WEMSTAAVPLIDFSHGEDPNRVKVIIDRNRKAIYFSRSLIP----SQFKQTVPLYRHLGI 177
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVE-KIE 286
YD +FL Y L + L+ E LEQL+ +E GY + V VD P D+E IE
Sbjct: 178 YGYDRDFLLKYNSLPKSNLEESESLEQLRAIEAGYGIGVYLAQEAGLSVDTPADLEVVIE 237
Query: 287 SFMRERNLS 295
F + + ++
Sbjct: 238 DFKKRKWIT 246
>gi|145639653|ref|ZP_01795256.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Haemophilus
influenzae PittII]
gi|145271210|gb|EDK11124.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Haemophilus
influenzae PittII]
gi|309750623|gb|ADO80607.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase
(CMP-KDOsynthetase) [Haemophilus influenzae R2866]
Length = 254
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 108/247 (43%), Positives = 150/247 (60%), Gaps = 11/247 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPARFASSR GKPL +I GKPMIQ +E++ L + +++ATD+E +A+ + FGA+
Sbjct: 6 IIPARFASSRLPGKPLADIAGKPMIQHVFEKA-LQSGASRVIIATDNENVADVAKSFGAE 64
Query: 113 VIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS + +GTER E ++KL +I+VNIQGDEPLI P I+ V L +
Sbjct: 65 VCMTSVNHNSGTERLAEVVEKLAIPDNEIIVNIQGDEPLIPPVIVRQVADNLAKFNVNMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ--------FPYLL 223
S AV E+ F+PN VK + D GY +YFSR +IPY++ +N Q YL
Sbjct: 125 SLAVKIHDAEELFNPNAVKVLTDKDGYVLYFSRSVIPYDRDQFMNLQDVQKVQLSDAYLR 184
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDV 282
H+GI +Y + F+K Y PT L+ E LEQL+VL NG ++ V + + A GVD ED+
Sbjct: 185 HIGIYAYRAGFIKQYVQWAPTQLENLEKLEQLRVLYNGERIHVELAKEVPAVGVDTAEDL 244
Query: 283 EKIESFM 289
EK+ +
Sbjct: 245 EKVRLIL 251
>gi|335044300|ref|ZP_08537325.1| CMP-2-keto-3-deoxyoctulosonic acid synthetase [Methylophaga
aminisulfidivorans MP]
gi|333787546|gb|EGL53430.1| CMP-2-keto-3-deoxyoctulosonic acid synthetase [Methylophaga
aminisulfidivorans MP]
Length = 250
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 102/246 (41%), Positives = 155/246 (63%), Gaps = 8/246 (3%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+AS+R GKPL++I GKPMIQ +ER+ L + D++++ATDDE+IAE F AD
Sbjct: 6 VIPARYASTRLPGKPLLDIAGKPMIQHVYERA-LESDADNVIIATDDERIAEAATAFDAD 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS++ R+GT+R E ++ + K D IV+N+QGDEP + +I+ V L DA
Sbjct: 65 VCMTSDNHRSGTDRLAEVIKLRQFKDDEIVINVQGDEPCLPALLINQVAADLAQHADADM 124
Query: 172 STAVTSLKPE-DAFDPNRVKCVVDNHGYAIYFSRGLIPYNK----SGKVNPQFPYLLHLG 226
++ + + E FDPN VK V+D+ GYA+YFSR IP+ + + + P+ P+ H+G
Sbjct: 125 ASLFSRIHQEKQVFDPNVVKVVMDSQGYALYFSRAPIPWMRDHFHTTPLPPELPHYRHIG 184
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEA-HGVDAPEDVEKI 285
+ Y + FLK Y + P L+ EE LEQL+VL +G ++ + + A HGVD D+ ++
Sbjct: 185 LYGYRAAFLKNYAEMTPCLLETEESLEQLRVLFHGKRIHMSEALISAGHGVDTEADLLEV 244
Query: 286 ESFMRE 291
+ E
Sbjct: 245 RRLLAE 250
>gi|77360599|ref|YP_340174.1| CTP:CMP-3-deoxy-D-manno-octulosonate transferase [Pseudoalteromonas
haloplanktis TAC125]
gi|123588183|sp|Q3IGX8.1|KDSB_PSEHT RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|76875510|emb|CAI86731.1| CTP:CMP-3-deoxy-D-manno-octulosonate transferase [Pseudoalteromonas
haloplanktis TAC125]
Length = 253
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/256 (41%), Positives = 157/256 (61%), Gaps = 20/256 (7%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V +IPAR+ASSR GKPL +I GKPMIQ +E++ L+ +V+ATD +K+ + F
Sbjct: 4 VVVIPARYASSRLPGKPLADICGKPMIQHVYEKACLSGA-SKVVIATDHQKVFDAVSTFT 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQ--AAP 167
+DV+MT E ++GTER E + L+ + IVVN+QGDEPL+ PE + V L AP
Sbjct: 63 SDVLMTREDHQSGTERLAEVVDLLKLDNNTIVVNVQGDEPLLAPENVSQVATLLNESTAP 122
Query: 168 DAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ-----FPYL 222
A S A+ + ED F+PN VK V D + A+YFSR IP+++S + Q P+
Sbjct: 123 MATLSVAIE--EQEDVFNPNAVKVVSDINKNALYFSRASIPFDRSAMMGEQSTLDLTPFQ 180
Query: 223 LHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAH-----GVD 277
H+GI +Y + F+K Y L +PL+ E LEQL+VL +GY +K+ +AH GVD
Sbjct: 181 RHVGIYAYRAGFIKQYIELSVSPLEQLESLEQLRVLYHGYNIKI----EQAHITPQAGVD 236
Query: 278 APEDVEKIESFMRERN 293
PED+ K+ S+++ ++
Sbjct: 237 TPEDLAKVISYLQSKH 252
>gi|150005832|ref|YP_001300576.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bacteroides
vulgatus ATCC 8482]
gi|294776484|ref|ZP_06741959.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Bacteroides
vulgatus PC510]
gi|319641005|ref|ZP_07995712.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bacteroides sp.
3_1_40A]
gi|345519343|ref|ZP_08798767.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bacteroides sp.
4_3_47FAA]
gi|423314700|ref|ZP_17292633.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bacteroides
vulgatus CL09T03C04]
gi|226724252|sp|A6L5J0.1|KDSB_BACV8 RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|149934256|gb|ABR40954.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bacteroides
vulgatus ATCC 8482]
gi|254834781|gb|EET15090.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bacteroides sp.
4_3_47FAA]
gi|294449681|gb|EFG18206.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Bacteroides
vulgatus PC510]
gi|317387383|gb|EFV68255.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bacteroides sp.
3_1_40A]
gi|392681447|gb|EIY74805.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bacteroides
vulgatus CL09T03C04]
Length = 252
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 102/251 (40%), Positives = 152/251 (60%), Gaps = 10/251 (3%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR+AS+RF KPL + GKP+IQR +E +++ LD VATDDE+I +
Sbjct: 2 KFIGIIPARYASTRFPAKPLAVLGGKPVIQRVYE--QVSGILDEAYVATDDERIESAVKA 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG V+MTS ++GT+RC EA K+ + YD+VVNIQGDEP I+ ++ VKA P
Sbjct: 60 FGGKVVMTSVHHKSGTDRCYEAYTKVGRGYDVVVNIQGDEPFIQKSQLEA-VKACFEDPA 118
Query: 169 AVFSTAVTSLKPEDAFDP----NRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF---PY 221
+T V P+D + N K VV + A+YFSR +IP+ ++ + Y
Sbjct: 119 TQIATLVKPFIPDDGLEALENVNSPKVVVGKNMNALYFSRSIIPFQRNVEKEGWLKGHTY 178
Query: 222 LLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPED 281
H+G+ +Y ++ LK L + L+L E LEQL+ LENGY +KV + E G+D P+D
Sbjct: 179 YKHIGLYAYRADVLKEITSLPQSSLELAESLEQLRWLENGYTIKVGISEVETIGIDTPQD 238
Query: 282 VEKIESFMRER 292
+ + E+F+++R
Sbjct: 239 LARAEAFLKQR 249
>gi|145642139|ref|ZP_01797708.1| hypothetical protein CGSHiR3021_11024 [Haemophilus influenzae
R3021]
gi|145273130|gb|EDK13007.1| hypothetical protein CGSHiR3021_11024 [Haemophilus influenzae
22.4-21]
Length = 254
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 108/247 (43%), Positives = 150/247 (60%), Gaps = 11/247 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPARFASSR GKPL +I GKPMIQ +E++ L + +++ATD+E +A+ + FGA+
Sbjct: 6 IIPARFASSRLPGKPLADIAGKPMIQHVFEKA-LQSGSSRVIIATDNENVADVAKSFGAE 64
Query: 113 VIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS + +GTER E ++KL +I+VNIQGDEPLI P I+ V L +
Sbjct: 65 VCMTSVNHNSGTERLAEVVEKLAIPDNEIIVNIQGDEPLIPPVIVRQVADNLAKFNVNMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ--------FPYLL 223
S AV E+ F+PN VK + D GY +YFSR +IPY++ +N Q YL
Sbjct: 125 SLAVKIHDAEELFNPNAVKVLTDKDGYVLYFSRSVIPYDRDQFMNLQDVQKVQLADAYLR 184
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDV 282
H+GI +Y + F+K Y PT L+ E LEQL+VL NG ++ V + + A GVD ED+
Sbjct: 185 HIGIYAYRAGFIKQYVQWAPTQLENLEKLEQLRVLYNGERIHVELAKEVPAVGVDTAEDL 244
Query: 283 EKIESFM 289
EK+ +
Sbjct: 245 EKVRLIL 251
>gi|91776439|ref|YP_546195.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Methylobacillus
flagellatus KT]
gi|122985431|sp|Q1GZI3.1|KDSB_METFK RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|91710426|gb|ABE50354.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Methylobacillus
flagellatus KT]
Length = 257
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/245 (43%), Positives = 147/245 (60%), Gaps = 9/245 (3%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ASSR GKPL++I GKPM+ R ERS LA+ +VVATD E+I E +G D
Sbjct: 6 VIPARYASSRLPGKPLLDIAGKPMVVRVIERS-LASGAAEVVVATDHERIQEAVSSYGYD 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V+MTS +GT+R E +Q+ + D IVVN+QGDEPLI+P +I V L A +A
Sbjct: 65 VMMTSADHASGTDRIAEVVQQRGWEDDTIVVNVQGDEPLIDPRLIGEVAGNLSAHAEASM 124
Query: 172 STAVTSLKPEDA-FDPNRVKCVVDNHGYAIYFSRGLIPYNKSG-----KVNPQFPYLLHL 225
+TA L + +PN VK V+D G+A+YFSR IPY + + P P H+
Sbjct: 125 ATACHVLHDTPSILNPNIVKVVLDQQGHALYFSRAPIPYPRDAFAANQDIPPGMPIYRHI 184
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI +Y + FL+ Y L P+ ++ E LEQL+VL +GYK+ V I A GVD D+
Sbjct: 185 GIYAYRAGFLRAYAALTPSAIEYFESLEQLRVLWHGYKISVEITEKAPASGVDTEADLAY 244
Query: 285 IESFM 289
+ S +
Sbjct: 245 VRSVV 249
>gi|417839787|ref|ZP_12485956.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Haemophilus
haemolyticus M19107]
gi|341951759|gb|EGT78314.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Haemophilus
haemolyticus M19107]
Length = 254
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/247 (43%), Positives = 150/247 (60%), Gaps = 11/247 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPARFASSR GKPL +I GKPMIQ +E++ + +++ATD+E +A+ + FGA+
Sbjct: 6 IIPARFASSRLPGKPLADIAGKPMIQHVFEKA-WQSGASRVIIATDNENVADVAKSFGAE 64
Query: 113 VIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS + +GTER E ++KL +I+VNIQGDEPLI P I+ V L +
Sbjct: 65 VCMTSVNHNSGTERLAEVVEKLAIPDNEIIVNIQGDEPLIPPVIVRQVADNLAKFNVNMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ--------FPYLL 223
S AV E+ F+PN VK + D GY +YFSR +IPY++ +N Q YL
Sbjct: 125 SLAVKIHDAEELFNPNAVKVLTDKDGYVLYFSRSVIPYDRDQFMNLQDVQKVQLADAYLR 184
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDV 282
H+GI +Y + F+K Y PT L+ E LEQL+VL NG ++ V + + A GVD ED+
Sbjct: 185 HIGIYAYRAGFIKQYVQWAPTQLENLEKLEQLRVLYNGERIHVELAKEVPAVGVDTAEDL 244
Query: 283 EKIESFM 289
EK+ + +
Sbjct: 245 EKVRAIL 251
>gi|333376776|ref|ZP_08468512.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Dysgonomonas
mossii DSM 22836]
gi|332885989|gb|EGK06233.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Dysgonomonas
mossii DSM 22836]
Length = 247
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 99/243 (40%), Positives = 145/243 (59%), Gaps = 10/243 (4%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ + IIPAR+AS+RF GKPL ++ GKPMIQR +E+ K A + + VATDD +I + Q
Sbjct: 2 KFIAIIPARYASTRFPGKPLADMGGKPMIQRVYEQVKRA--VHGVWVATDDSRIFQIVQS 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG +MTS R+GT+R EA K+ + +D+V+N+QGDEP I PE I+ + + + D
Sbjct: 60 FGGKAVMTSTEHRSGTDRIQEAYSKIGEDFDVVINVQGDEPFIRPEQIESLKECFDSK-D 118
Query: 169 AVFSTAVTSLKPEDAFD----PNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP---Y 221
+T V K ED FD PN K V++ AIYFSR ++PY + +
Sbjct: 119 VELATLVKPFKKEDGFDVLFNPNSPKVVINKKNEAIYFSRSIVPYIRDAHHTEWLDKHIF 178
Query: 222 LLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPED 281
H+G+ +Y + LK L + L+ E LEQL+ +ENGY+++V D E G+D PED
Sbjct: 179 YKHIGMYAYRVDVLKEITQLPQSSLEKAESLEQLRWIENGYRIRVGYTDVETIGIDTPED 238
Query: 282 VEK 284
+E+
Sbjct: 239 MER 241
>gi|419845945|ref|ZP_14369205.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Haemophilus
parainfluenzae HK2019]
gi|386414726|gb|EIJ29273.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Haemophilus
parainfluenzae HK2019]
Length = 252
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 106/247 (42%), Positives = 151/247 (61%), Gaps = 11/247 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPARFASSR GKPL +I GKPMIQ +E+++ + +++ATD+E++ + + FGA+
Sbjct: 6 IIPARFASSRLPGKPLADIAGKPMIQHVFEKAQ-QSGASRVIIATDNEQVEKAAKAFGAE 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTSE+ +GTER E + KL D I+VNIQGDEPLI P ++ V + L +
Sbjct: 65 VCMTSEAHNSGTERLAEVVSKLGIADDEIIVNIQGDEPLIPPVVVSQVAENLANFNVNMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK--------SGKVNPQFPYLL 223
+ AV + E+ F+PN VK V D GY +YFSR +IPY++ + K YL
Sbjct: 125 TLAVKIHEAEELFNPNAVKVVTDKDGYVLYFSRSVIPYDRDQFMQLEDTSKAQLADTYLR 184
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDV 282
H+GI +Y + F+K Y PT L+ E LEQL+VL G ++ V + + A GVD ED+
Sbjct: 185 HIGIYAYRAGFIKQYVQWAPTQLENLEKLEQLRVLWYGERIHVELAKEVPAVGVDTAEDL 244
Query: 283 EKIESFM 289
EK+ S +
Sbjct: 245 EKVRSIL 251
>gi|85711270|ref|ZP_01042329.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Idiomarina baltica
OS145]
gi|85694771|gb|EAQ32710.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Idiomarina baltica
OS145]
Length = 252
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/244 (43%), Positives = 154/244 (63%), Gaps = 15/244 (6%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR+ SSR GKPL +I GKPMIQ +ER+ L + +++ATDD++IA+ ++FG
Sbjct: 6 IIPARYPSSRLPGKPLADIGGKPMIQHVYERA-LQSGAAEVIIATDDQRIADEVERFGGR 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKAL---QAAPD 168
++TS ++GTER E +++L D +VVN+QGDEP I PEII V L + AP
Sbjct: 65 SMLTSSEHQSGTERLAEVVEQLALSEDQVVVNVQGDEPFIPPEIIRQVADNLANQRVAPM 124
Query: 169 AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS--GKVNPQFP-----Y 221
A AV ++ F+PN VK V D+ GYA+YFSR IPYN+ +N Q P Y
Sbjct: 125 ATL--AVPMATSDEVFNPNAVKVVCDSAGYALYFSRAPIPYNREQFKSLNDQQPEQVDGY 182
Query: 222 LLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIK-VDHEAHGVDAPE 280
+ H+GI +Y ++F+K Y + +PL+ E LEQL+VL +G K+ V + + A G+D PE
Sbjct: 183 MRHIGIYAYRADFIKRYVAWNESPLERIESLEQLRVLWHGEKIHVAEAIMPPAAGIDTPE 242
Query: 281 DVEK 284
D+E+
Sbjct: 243 DLEQ 246
>gi|28897758|ref|NP_797363.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio
parahaemolyticus RIMD 2210633]
gi|153837329|ref|ZP_01989996.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio
parahaemolyticus AQ3810]
gi|260363814|ref|ZP_05776569.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio
parahaemolyticus K5030]
gi|260876926|ref|ZP_05889281.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio
parahaemolyticus AN-5034]
gi|260897932|ref|ZP_05906428.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio
parahaemolyticus Peru-466]
gi|260903467|ref|ZP_05911862.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio
parahaemolyticus AQ4037]
gi|433657235|ref|YP_007274614.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio
parahaemolyticus BB22OP]
gi|31076728|sp|Q87R14.1|KDSB_VIBPA RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|28805971|dbj|BAC59247.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio
parahaemolyticus RIMD 2210633]
gi|149749360|gb|EDM60133.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio
parahaemolyticus AQ3810]
gi|308085470|gb|EFO35165.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio
parahaemolyticus Peru-466]
gi|308093705|gb|EFO43400.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio
parahaemolyticus AN-5034]
gi|308110369|gb|EFO47909.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio
parahaemolyticus AQ4037]
gi|308113900|gb|EFO51440.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio
parahaemolyticus K5030]
gi|432507923|gb|AGB09440.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio
parahaemolyticus BB22OP]
Length = 251
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 105/250 (42%), Positives = 153/250 (61%), Gaps = 15/250 (6%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR++SSR GKPL +I GKPM+Q +E++ A D +++ATDDE+++ +QFG
Sbjct: 6 VIPARYSSSRLPGKPLADIGGKPMVQWVYEQAMQAGA-DDVIIATDDERVSAAVEQFGGK 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS + +GTER E ++K+ D I+VN+QGDEPL+ P II V L AA DA
Sbjct: 65 VCMTSPNHESGTERLAEVVEKMAIPADHIIVNVQGDEPLVPPVIIRQVADNL-AASDAPM 123
Query: 172 STAVTSLKPED-AFDPNRVKCVVDNHGYAIYFSRGLIPYNKS-------GKVNPQFPYLL 223
+T ++ ED F+PN VK V D GYA+YFSR IP+++ VN P +
Sbjct: 124 ATLAVEIESEDEVFNPNAVKVVADERGYAMYFSRATIPWDRDNFAKQDKAIVN---PLMR 180
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDV 282
H+GI +Y + F+ Y P+ L+ E LEQL+VL G K+ V + + A GVD PED+
Sbjct: 181 HIGIYAYRAGFINTYVNWAPSALEQIECLEQLRVLWYGEKIHVAVAKEAPAAGVDTPEDL 240
Query: 283 EKIESFMRER 292
E + + + ++
Sbjct: 241 EAVRAIVAKK 250
>gi|156973828|ref|YP_001444735.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio harveyi
ATCC BAA-1116]
gi|166220473|sp|A7MV12.1|KDSB_VIBHB RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|156525422|gb|ABU70508.1| hypothetical protein VIBHAR_01538 [Vibrio harveyi ATCC BAA-1116]
Length = 252
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 103/246 (41%), Positives = 148/246 (60%), Gaps = 7/246 (2%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ASSR GKPL +I GKPMIQ +E++ A D +++ATDD++++ +QFG
Sbjct: 6 VIPARYASSRLPGKPLADIGGKPMIQWVYEQALQAGAED-VIIATDDKRVSAAAEQFGGK 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS + +GTER E ++K+ D IVVN+QGDEPLI P II V L +
Sbjct: 65 VCMTSPNHESGTERLAEVVEKMAIPADHIVVNVQGDEPLIPPSIIRQVADNLAGCDAPMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ----FPYLLHLGI 227
+ AV E+ F+PN VK V D GYA+YFSR IP+++ P +LH+GI
Sbjct: 125 TLAVEIESEEEVFNPNAVKVVADERGYAMYFSRATIPWDRDNFAKQDKTIANPLMLHIGI 184
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKIE 286
+Y + F+ Y P+ L+ E LEQL+VL G K+ V + + A GVD PED+E +
Sbjct: 185 YAYRAGFINTYVNWQPSALEQIECLEQLRVLWYGEKIHVEVAKEAPAAGVDTPEDLESVR 244
Query: 287 SFMRER 292
+ + ++
Sbjct: 245 AIVAKQ 250
>gi|163802109|ref|ZP_02196005.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio sp. AND4]
gi|159174250|gb|EDP59058.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio sp. AND4]
Length = 251
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 108/247 (43%), Positives = 150/247 (60%), Gaps = 15/247 (6%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ASSR GKPL +I GKPMIQ +E++ A D +++ATDDE+++ +QFG
Sbjct: 6 VIPARYASSRLPGKPLADIGGKPMIQWVYEQALQAGAED-VIIATDDERVSAAAEQFGGK 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS +GTER E ++K+ D IVVN+QGDEPLI P II V L A DA
Sbjct: 65 VCMTSPHHESGTERLAEVVEKMAIPADHIVVNVQGDEPLIPPSIIRQVADNL-AGCDAPM 123
Query: 172 STAVTSLKPE-DAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS-------GKVNPQFPYLL 223
+T ++ E + F+PN VK V D GYA+YFSR IP+++ VN P +
Sbjct: 124 ATLAVEIESELEVFNPNAVKVVTDKRGYAMYFSRATIPWDRDHFSQQDKTIVN---PLMR 180
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDV 282
H+GI +Y + F+ Y P+PL+ E LEQL+VL G + V + + A GVD PED+
Sbjct: 181 HIGIYAYRAGFINTYVNWQPSPLEQIECLEQLRVLWYGENIHVEVAKEAPAAGVDTPEDL 240
Query: 283 EKIESFM 289
E + +F+
Sbjct: 241 ELVRAFV 247
>gi|254360654|ref|ZP_04976803.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Mannheimia
haemolytica PHL213]
gi|261493331|ref|ZP_05989857.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Mannheimia
haemolytica serotype A2 str. BOVINE]
gi|261496596|ref|ZP_05992976.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Mannheimia
haemolytica serotype A2 str. OVINE]
gi|452745808|ref|ZP_21945640.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Mannheimia
haemolytica serotype 6 str. H23]
gi|153091194|gb|EDN73199.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Mannheimia
haemolytica PHL213]
gi|261307799|gb|EEY09122.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Mannheimia
haemolytica serotype A2 str. OVINE]
gi|261310975|gb|EEY12152.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Mannheimia
haemolytica serotype A2 str. BOVINE]
gi|452085947|gb|EME02338.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Mannheimia
haemolytica serotype 6 str. H23]
Length = 251
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 104/250 (41%), Positives = 146/250 (58%), Gaps = 19/250 (7%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR+ASSR KPL++I GKPMIQ WE+++LA +++ATD +I Q FGA+
Sbjct: 6 IIPARYASSRLPRKPLLDIAGKPMIQHVWEKAQLAGA-SRVIIATDHPEIEALAQSFGAE 64
Query: 113 VIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTSE +GTER E ++K++ +I+VNIQGDEPLI P I+ V + L A +
Sbjct: 65 VCMTSEKHNSGTERLAEVIEKMQIADSEIIVNIQGDEPLIPPVIVTQVAQNLDAYQVNMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP----------- 220
+ V E+ F+PN VK V D +G A+YFSR IP+ + FP
Sbjct: 125 TLGVKLATREELFNPNAVKVVADKNGMALYFSRASIPFARDS-----FPDCDDSFVAAQG 179
Query: 221 YLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAH-GVDAP 279
YL H+GI +Y + F+K Y PT L+ E LEQL+ L +G K+ + GVD P
Sbjct: 180 YLRHIGIYAYRAGFVKQYVAWQPTQLEQLESLEQLRALWHGEKIHIEPAKEAPQVGVDTP 239
Query: 280 EDVEKIESFM 289
ED+E++ + +
Sbjct: 240 EDLERVRAIL 249
>gi|452853969|ref|YP_007495653.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Desulfovibrio
piezophilus]
gi|451897623|emb|CCH50502.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Desulfovibrio
piezophilus]
Length = 246
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 98/240 (40%), Positives = 153/240 (63%), Gaps = 7/240 (2%)
Query: 52 GIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGA 111
GIIPAR+ASSRF GKPLV I GKPM +ER+ + + +ATDD++I + Q
Sbjct: 9 GIIPARYASSRFPGKPLVKIHGKPMFWHVYERASRCPQMSSVTLATDDQRIYDAAQGLEV 68
Query: 112 DVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAV 170
V+MTS + ++GT+R EA + L + +VVNIQGDEP +EP+++ +V + D V
Sbjct: 69 PVVMTSATHQSGTDRVLEAARLLALDTESVVVNIQGDEPCLEPDMLSELVCPFSS--DHV 126
Query: 171 -FSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQS 229
+T TS+ E+A P+RVK V +G A+YFSR ++P+++ K++ +LLH+G+ +
Sbjct: 127 RVATLATSVGYEEAVSPDRVKIVRAKNGRALYFSRSMVPFDRDEKIH---GFLLHIGLYA 183
Query: 230 YDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFM 289
+ + L + L P+PL+ E LEQL++LE+G + V + H HGVD+P+D+EK + +
Sbjct: 184 FRMDALARFGELAPSPLERREKLEQLRLLEDGIDIYVTETRHTCHGVDSPQDLEKAKDIL 243
>gi|329123097|ref|ZP_08251667.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Haemophilus
aegyptius ATCC 11116]
gi|327471652|gb|EGF17094.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Haemophilus
aegyptius ATCC 11116]
Length = 254
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 108/247 (43%), Positives = 150/247 (60%), Gaps = 11/247 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPARFASSR GKPL +I GKPMIQ +E++ L + + +++ATD+E +A+ + FGA+
Sbjct: 6 IIPARFASSRLPGKPLADIAGKPMIQHVFEKA-LQSGANRVIIATDNENVADVAKNFGAE 64
Query: 113 VIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS + +GTER E ++KL +I+VNIQGDEPLI P I+ V L +
Sbjct: 65 VCMTSVNHNSGTERLAEVVEKLAIPDNEIIVNIQGDEPLIPPVIVRQVADNLAKFNVNMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ--------FPYLL 223
S AV E+ F+PN VK + D GY +YFSR +IPY++ +N Q YL
Sbjct: 125 SLAVKIHDAEELFNPNAVKVLTDKDGYVLYFSRSVIPYDRDQFMNLQDVQKVQLADAYLR 184
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDV 282
H+GI +Y + F+K Y PT L+ E LEQL+VL NG + V + + A GVD ED+
Sbjct: 185 HIGIYAYRAGFIKQYVQWAPTQLENLEKLEQLRVLYNGEGIHVELAKEVPAVGVDTAEDL 244
Query: 283 EKIESFM 289
EK+ +
Sbjct: 245 EKVRLIL 251
>gi|319896471|ref|YP_004134664.1| 3-deoxy-d-manno-octulosonic acid cytidylyltransferase [Haemophilus
influenzae F3031]
gi|317431973|emb|CBY80321.1| 3-deoxy-D-manno-octulosonic acid cytidylyltransferase [Haemophilus
influenzae F3031]
Length = 254
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 107/247 (43%), Positives = 150/247 (60%), Gaps = 11/247 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPARFASSR GKPL +I GKPMIQ +E++ L + + +++ATD+E +A+ + FGA+
Sbjct: 6 IIPARFASSRLPGKPLADIAGKPMIQHVFEKA-LQSGANRVIIATDNENVADVAKNFGAE 64
Query: 113 VIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS + +GTER E ++KL +I+VNIQGDEPLI P I+ V L +
Sbjct: 65 VCMTSVNHNSGTERLAEVVEKLAIPDNEIIVNIQGDEPLIPPVIVRQVADNLAKFNVNMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ--------FPYLL 223
S AV E+ F+PN VK + D GY +YFSR +IPY++ +N Q YL
Sbjct: 125 SLAVKIHDAEELFNPNAVKVLTDKDGYVLYFSRSVIPYDRDQFMNLQDVQKVQLADAYLR 184
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDV 282
H+GI +Y + F+K Y PT L+ E LEQL+VL NG ++ V + + GVD ED+
Sbjct: 185 HIGIYAYRAGFIKQYVQWAPTQLENLEKLEQLRVLYNGERIHVELAKEVPTVGVDTAEDL 244
Query: 283 EKIESFM 289
EK+ +
Sbjct: 245 EKVRLIL 251
>gi|430746774|ref|YP_007205903.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Singulisphaera
acidiphila DSM 18658]
gi|430018494|gb|AGA30208.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Singulisphaera
acidiphila DSM 18658]
Length = 303
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 99/240 (41%), Positives = 147/240 (61%), Gaps = 5/240 (2%)
Query: 50 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQF 109
+V +IPARFAS+R GKPL++ G+P+IQ E ++ +T LD ++VATDD IAE F
Sbjct: 55 IVAVIPARFASTRLPGKPLLSETGRPLIQHVVEAARRSTRLDRIIVATDDRAIAEAVAAF 114
Query: 110 GADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
G + MT + +GT+R E + L + I+VN+QGDEP I P+ +D V+ L+ P+A
Sbjct: 115 GGECAMTRDDHPSGTDRVAEVAEGLPEA-GIIVNLQGDEPEISPQALDLVIALLENDPEA 173
Query: 170 VFSTAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPY---LLHL 225
+T T ++ ED DP+ VK V G A+YFSR IPY++ G+ + + LHL
Sbjct: 174 SMATLATPIRSEEDYLDPSCVKVVCTATGQALYFSRSPIPYHRDGRPDSASSHPLAYLHL 233
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKI 285
G+ +Y +FL L P+PL+ E LEQL+VLE G+++ V VD + G+D P+D +
Sbjct: 234 GLYAYRRDFLLRLATLPPSPLERIEKLEQLRVLEAGHRIAVGFVDEPSVGIDTPDDYRRF 293
>gi|444426340|ref|ZP_21221759.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio campbellii
CAIM 519 = NBRC 15631]
gi|444240374|gb|ELU51916.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio campbellii
CAIM 519 = NBRC 15631]
Length = 252
Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 103/243 (42%), Positives = 145/243 (59%), Gaps = 7/243 (2%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ASSR GKPL +I GKPMIQ +E++ A D +++ATDDE+++ +QFG
Sbjct: 6 VIPARYASSRLPGKPLADIGGKPMIQWVYEQALQAGAED-VIIATDDERVSAAAEQFGGK 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS + +GTER E ++K+ D IVVN+QGDEPLI P II V L +
Sbjct: 65 VCMTSPNHESGTERLAEVVEKMAIPVDHIVVNVQGDEPLIPPSIIRQVADNLAGCDAPIA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ----FPYLLHLGI 227
+ AV E+ F+PN VK V D GYA+YFSR IP+++ P + H+GI
Sbjct: 125 TLAVEIESEEEVFNPNAVKVVADERGYAMYFSRATIPWDRDNFAKQDKTIANPLMRHIGI 184
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKIE 286
+Y + F+ Y P+ L+ E LEQL+VL G K+ V + + A GVD PED+E +
Sbjct: 185 YAYRAGFINTYVNWQPSALEQIECLEQLRVLWYGEKIHVEVAKEAPAAGVDTPEDLEAVR 244
Query: 287 SFM 289
+ +
Sbjct: 245 AIV 247
>gi|435855067|ref|YP_007316386.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Halobacteroides
halobius DSM 5150]
gi|433671478|gb|AGB42293.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Halobacteroides
halobius DSM 5150]
Length = 241
Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 106/244 (43%), Positives = 147/244 (60%), Gaps = 6/244 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+V+ IIPAR++S+R GKP+ I GK MIQ +ER+ A LD ++VATDD++I + +
Sbjct: 2 KVIAIIPARYSSTRLPGKPIKKIKGKAMIQHVYERTAQAQNLDQVIVATDDQRIYQVVKD 61
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG V MTS + GT+R E LE DI+VN+QGDEPLI PE+ID VK L +
Sbjct: 62 FGGKVEMTSSQHQTGTDRLAEVANDLEA--DIIVNVQGDEPLIAPEMIDQAVKPLLEDNN 119
Query: 169 AVFSTAVTS-LKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
T + E+ +PN VK V D + +A+YFSR IPY Y H+G+
Sbjct: 120 LQMGTLKHPIISAEELENPNLVKVVTDKNDFALYFSRAPIPYPHQEN---DITYYKHIGL 176
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
Y FL Y L TPL+ +E LEQL+ LENGYK+KV+K +H++ GVD +D+EK+
Sbjct: 177 YVYRREFLLNYADLPATPLEQQESLEQLRALENGYKIKVVKTEHQSIGVDTKDDLEKVRK 236
Query: 288 FMRE 291
+ +
Sbjct: 237 IVNQ 240
>gi|424659580|ref|ZP_18096829.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HE-16]
gi|408052135|gb|EKG87194.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HE-16]
Length = 252
Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 105/247 (42%), Positives = 151/247 (61%), Gaps = 9/247 (3%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ S+R GKPL +I GKPMIQ +E++ A D +++ATDDE++ + Q FG
Sbjct: 6 VIPARYQSTRLPGKPLADIGGKPMIQWVYEQAMQAGA-DRVIIATDDERVEQAVQAFGGV 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS + ++GTER E + K+ D IVVN+QGDEPLI P II V L A +
Sbjct: 65 VCMTSPNHQSGTERLAEVVAKMAIPADHIVVNVQGDEPLIPPAIIRQVADNLAACSAPMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYN-----KSGKVNPQFPYLLHLG 226
+ AV +AF+PN VK + D +GYA+YFSR IP++ K+ K Q P L H+G
Sbjct: 125 TLAVEITDEAEAFNPNAVKVITDKNGYALYFSRATIPWDRDNFAKADKAIVQ-PLLRHIG 183
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKI 285
I +Y + F+ Y P+ L+ E LEQL+VL +G K+ V + ++ GVD PED++ +
Sbjct: 184 IYAYRAGFINTYLDWQPSQLEKIECLEQLRVLWHGEKIHVAVALEAPPAGVDTPEDLKVV 243
Query: 286 ESFMRER 292
+ + ER
Sbjct: 244 QRIVAER 250
>gi|422909644|ref|ZP_16944287.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HE-09]
gi|341634629|gb|EGS59382.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HE-09]
Length = 252
Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 105/247 (42%), Positives = 150/247 (60%), Gaps = 9/247 (3%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ S+R GKPL +I GKPMIQ +E++ A D +++ATDDE++ + Q FG
Sbjct: 6 VIPARYQSTRLPGKPLADIGGKPMIQWVYEQAMQAGA-DRVIIATDDERVEQAVQAFGGV 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS + ++GTER E + K+ D IVVN+QGDEPLI P II V L A +
Sbjct: 65 VCMTSPNHQSGTERLAEVVAKMAIPADHIVVNVQGDEPLIPPAIIRQVADNLAACSAPMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYN-----KSGKVNPQFPYLLHLG 226
+ AV + F+PN VK + D +GYA+YFSR IP++ K+ K Q P L H+G
Sbjct: 125 TLAVEITDEAEVFNPNAVKVITDKNGYALYFSRATIPWDRDNFAKADKAIVQ-PLLRHIG 183
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKI 285
I +Y + F+ Y P+ L+ E LEQL+VL +G K+ V + ++ GVD PED+E +
Sbjct: 184 IYAYRAGFINTYLDWQPSQLEKIECLEQLRVLWHGEKIHVAVALEAPPAGVDTPEDLEVV 243
Query: 286 ESFMRER 292
+ + ER
Sbjct: 244 QRIVAER 250
>gi|340345950|ref|ZP_08669080.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Prevotella
dentalis DSM 3688]
gi|433651685|ref|YP_007278064.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Prevotella
dentalis DSM 3688]
gi|339612937|gb|EGQ17733.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Prevotella
dentalis DSM 3688]
gi|433302218|gb|AGB28034.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Prevotella
dentalis DSM 3688]
Length = 249
Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 102/254 (40%), Positives = 154/254 (60%), Gaps = 17/254 (6%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
++ I+PAR+ASSRF GKPL + GKP+I+ +E +++ + VATDDE+I + +
Sbjct: 2 KITAIVPARYASSRFPGKPLALLGGKPVIEHVYE--QVSQVVPETWVATDDERIKDAVET 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG V+MT ++GT+R EA++K+ DI++NIQGDEP ++ I V + + A
Sbjct: 60 FGGKVVMTRRDHQSGTDRIEEAVEKIGSDADIIINIQGDEPFVQASQIRTVCQLFEDA-- 117
Query: 169 AVFSTAVTSL-KPEDAFD----PNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ----F 219
T + +L KP D + PN K V D G+A+YFSR +IP+ + GKV+ + F
Sbjct: 118 ---ETQIATLGKPFDTMEAVDNPNSPKIVTDVRGFALYFSRSVIPFVR-GKVHDEWLEHF 173
Query: 220 PYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAP 279
PYL HLGI +Y L+ L +PL+L E LEQL+ L+ GY++KV E G+D P
Sbjct: 174 PYLKHLGIYAYRREVLREITRLPQSPLELAESLEQLRWLQQGYRIKVGLTHVETIGIDTP 233
Query: 280 EDVEKIESFMRERN 293
D+E+ E+F R++
Sbjct: 234 ADLERAEAFWRKQK 247
>gi|392399453|ref|YP_006436054.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Flexibacter
litoralis DSM 6794]
gi|390530531|gb|AFM06261.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Flexibacter
litoralis DSM 6794]
Length = 248
Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 97/244 (39%), Positives = 152/244 (62%), Gaps = 7/244 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+++ IIPAR+ASSRF K L +I GKPMI+R + ++K A L + +ATD++ + + ++
Sbjct: 2 KIIAIIPARYASSRFPAKVLADINGKPMIERVFNQAKKAAKLSDVFIATDNQIVFDKVKE 61
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKK---YDIVVNIQGDEPLIEPEIIDGVVKALQA 165
F +V+MTS+S +GT+R EA LEKK +D ++NIQGDEP I+P ID + L
Sbjct: 62 FTQNVLMTSDSHISGTDRIAEAALILEKKNIEFDFIINIQGDEPFIQPLQIDSLATILVE 121
Query: 166 APDAVFSTAVTSLK-PEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVN---PQFPY 221
+ +T V+ +K E FD N VK + D + AIYFSR IP+ ++ + N + +
Sbjct: 122 NKNTQLATLVSKIKDSETLFDSNVVKAIFDTNHKAIYFSRNPIPFVRNTEKNNWLSEHTF 181
Query: 222 LLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPED 281
H+G+ +Y L+ L P+ L+L E LEQL+ +ENG+++++ E+ G+D PED
Sbjct: 182 YRHIGMYAYQKQVLQQITKLKPSTLELAESLEQLRWIENGFEIQIAITPFESIGIDTPED 241
Query: 282 VEKI 285
+EKI
Sbjct: 242 LEKI 245
>gi|317487413|ref|ZP_07946201.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Bilophila
wadsworthia 3_1_6]
gi|316921345|gb|EFV42643.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Bilophila
wadsworthia 3_1_6]
Length = 254
Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 101/242 (41%), Positives = 150/242 (61%), Gaps = 6/242 (2%)
Query: 52 GIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGA 111
GIIPAR+ SSRF GKPL +I G+PM + +K A+ L ++V+ATDDE+IAE ++
Sbjct: 9 GIIPARYDSSRFPGKPLADIWGRPMFWHVYAHAKRASVLRNIVLATDDERIAEAALEWEI 68
Query: 112 DVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAV 170
+MT +GT+R EA KL + + ++VNIQGDEP ++P +I+ +V+ V
Sbjct: 69 PCVMTRRDHASGTDRVFEAASKLGVEPHAVIVNIQGDEPALDPAVIEQLVRPFLDGTVQV 128
Query: 171 FSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSY 230
ST T + PE A PN+VK V +G A+YFSR IP+++ G L H+G+ ++
Sbjct: 129 -STLATPISPERAASPNQVKVVTAANGDALYFSRSRIPFDREGG---DGEILGHIGLYAF 184
Query: 231 DSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVD-HEAHGVDAPEDVEKIESFM 289
L+ + L +PL+ E LEQL+ LENG ++V++V+ +EAHGVD PED+E I +
Sbjct: 185 RMGALERFVSLPQSPLEKREKLEQLRFLENGVPIRVVRVEGYEAHGVDTPEDLETIRELL 244
Query: 290 RE 291
E
Sbjct: 245 AE 246
>gi|358638236|dbj|BAL25533.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Azoarcus sp.
KH32C]
Length = 258
Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 102/246 (41%), Positives = 151/246 (61%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+AS+R GKPL +I GKPM+ R E+++ + + VA+DDE++ + + GAD
Sbjct: 7 VIPARYASTRLPGKPLADIGGKPMVVRVLEQARKSGAA-SVWVASDDERVLDAVRVAGAD 65
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V+MT +GT+R E ++ LE D IVVN+QGDEPLI+P++I V +AL A PDA
Sbjct: 66 VLMTRADHPSGTDRLAEVVEALEWSDDAIVVNVQGDEPLIDPDLIRAVAEALAADPDAAI 125
Query: 172 STAVTSLKPE-DAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS------GKVNPQFPYLLH 224
+TA + + F+ N VK V D +A+YFSR IP+ + G V P H
Sbjct: 126 ATAAHLITDAGEFFNANVVKVVCDARAHALYFSRAPIPWPRDAFAADRGSVPEGLPVQRH 185
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKV-DHEAHGVDAPEDVE 283
+GI +Y FL+ Y L P+PL+ E LEQL+ L +GY+++V+ V + A GVD PED+
Sbjct: 186 IGIYAYRVAFLRRYAELAPSPLEGWEALEQLRALWHGYRIRVLSVAEAPAAGVDTPEDLA 245
Query: 284 KIESFM 289
++ +
Sbjct: 246 RVRAVF 251
>gi|429738431|ref|ZP_19272241.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Prevotella
saccharolytica F0055]
gi|429160402|gb|EKY02870.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Prevotella
saccharolytica F0055]
Length = 252
Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 96/249 (38%), Positives = 151/249 (60%), Gaps = 5/249 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ + IIPAR+ SSRF GKPLV + GK +IQR +E ++A LD VATDD +I +
Sbjct: 2 KFISIIPARYGSSRFPGKPLVTLGGKLLIQRVYE--QVAQVLDATYVATDDRRIYDAVIG 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG +MTS + ++GT+R EA+Q+++ D+VVNIQGDEP ++ I + Q+A
Sbjct: 60 FGGQAVMTSPNHQSGTDRIKEAMQQIDGSVDVVVNIQGDEPFVQYRQIKALCACFQSADT 119
Query: 169 AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVN---PQFPYLLHL 225
+ + + E+ +PN K +VDN+ A+YFSR +IP+ + + +P+L HL
Sbjct: 120 QIATLGIPFQTMEEVENPNSPKIIVDNNDNALYFSRSVIPFIRGIEREMWLKAYPFLKHL 179
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKI 285
G +Y + L L + L+ E LEQL+ L+NGYK+KV + + + G+D PED+++
Sbjct: 180 GFYAYRRDVLDEITQLPQSSLEKAESLEQLRWLQNGYKIKVARTEIDTVGIDTPEDLKRA 239
Query: 286 ESFMRERNL 294
E F+ ++L
Sbjct: 240 EVFLANQSL 248
>gi|423225587|ref|ZP_17212054.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bacteroides
cellulosilyticus CL02T12C19]
gi|392632147|gb|EIY26111.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bacteroides
cellulosilyticus CL02T12C19]
Length = 250
Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 102/249 (40%), Positives = 150/249 (60%), Gaps = 10/249 (4%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR+AS+RF KPL + GK +IQR +E+ +A LD VATDDE+I E +
Sbjct: 3 KFLGIIPARYASTRFPAKPLAMLGGKTVIQRVYEQ--VAGILDDAYVATDDERIEEAVKA 60
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG V+MTS + ++GT+RC EA K+ +D+VVNIQGDEP I+P ++ VKA
Sbjct: 61 FGGKVVMTSVNHKSGTDRCYEAYTKIGGDFDVVVNIQGDEPFIQPSQLE-TVKACFDDIT 119
Query: 169 AVFSTAVTSLKPEDAFDP----NRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF---PY 221
+T V PE+ F+ N K V++ + A+YFSR +IPY ++ + Y
Sbjct: 120 TQIATLVKPFTPENGFEALENINSPKVVLNKNMNALYFSRSIIPYQRNAEKQDWLKNHTY 179
Query: 222 LLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPED 281
H+G+ +Y + LK L + L+L E LEQL+ LENGY +K + E G+D P+D
Sbjct: 180 YKHIGLYAYRAEVLKEITSLPQSSLELAESLEQLRWLENGYTIKAGITEVETIGIDTPQD 239
Query: 282 VEKIESFMR 290
++K E F++
Sbjct: 240 LKKAEEFLK 248
>gi|145635243|ref|ZP_01790947.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Haemophilus
influenzae PittAA]
gi|145267522|gb|EDK07522.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Haemophilus
influenzae PittAA]
Length = 254
Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 107/247 (43%), Positives = 150/247 (60%), Gaps = 11/247 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPARFASSR GKPL +I GKPMIQ +E++ L + +++ATD+E +++ + FGA+
Sbjct: 6 IIPARFASSRLPGKPLADIAGKPMIQYVFEKA-LQSGASRVIIATDNENVSDVAKSFGAE 64
Query: 113 VIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS + +GTER E ++KL I+VNIQGDEPLI P I+ V L +
Sbjct: 65 VCMTSVNHNSGTERLAEVVEKLAIPDNQIIVNIQGDEPLIPPVIVRQVADNLAKFNVNMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ--------FPYLL 223
S AV E+ F+PN VK + D GY +YFSR +IPY++ +N Q YL
Sbjct: 125 SLAVKIHDVEELFNPNAVKVLTDKDGYVLYFSRSVIPYDRDQFMNLQDVQKVQLADAYLR 184
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDV 282
H+GI +Y + F+K Y PT L+ E LEQL+VL NG ++ V + + A GVD ED+
Sbjct: 185 HIGIYAYRAGFIKQYVQWAPTQLENLEKLEQLRVLYNGERIHVELAKEVPAVGVDTAEDL 244
Query: 283 EKIESFM 289
EK+ + +
Sbjct: 245 EKVRAIL 251
>gi|443472658|ref|ZP_21062684.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
pseudoalcaligenes KF707]
gi|442903100|gb|ELS28513.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
pseudoalcaligenes KF707]
Length = 254
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 101/246 (41%), Positives = 146/246 (59%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+AS+R GKPL +I GKPM+QR WE+++ + +VVATDD +I E CQ FGA+
Sbjct: 8 VIPARYASTRLPGKPLQDIAGKPMVQRVWEQARRSAA-QRVVVATDDPRIVEACQGFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V++T +GT+R E +L D IVVN+QGDEPL+ P IID V L A P+A
Sbjct: 67 VLLTRADHNSGTDRLAEVASQLGLASDAIVVNVQGDEPLVPPSIIDQVAANLAAHPEAGI 126
Query: 172 STAVTSLKPEDA-FDPNRVKCVVDNHGYAIYFSRGLIPYNKSG------KVNPQFPYLLH 224
+T ++ A F+PN VK V D +G A+ FSR +P+ + ++ PY H
Sbjct: 127 ATLSEPIEDVQALFNPNVVKVVADLNGLALTFSRATLPWARDAFAASPDRLPEGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDAPEDVE 283
+GI +Y + FL + P L+ E LEQL+ L +G ++ V V+ GVD PED+E
Sbjct: 187 IGIYAYRAGFLHDFVAWGPCWLENTESLEQLRALWHGVRIHVADAVEAPPAGVDTPEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|417821220|ref|ZP_12467834.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HE39]
gi|423956381|ref|ZP_17734935.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HE-40]
gi|423985167|ref|ZP_17738484.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HE-46]
gi|340038851|gb|EGQ99825.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HE39]
gi|408657623|gb|EKL28701.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HE-40]
gi|408664398|gb|EKL35235.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HE-46]
Length = 252
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 105/247 (42%), Positives = 151/247 (61%), Gaps = 9/247 (3%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ S+R GKPL +I GKPMIQ +E++ A D +++ATDDE++ + Q FG
Sbjct: 6 VIPARYQSTRLLGKPLADIGGKPMIQWVYEQAMQAGA-DRVIIATDDERVEQAVQAFGGV 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS + ++GTER E + K+ D IVVN+QGDEPLI P II V L A +
Sbjct: 65 VCMTSPNHQSGTERLAEVVAKMAIPADHIVVNVQGDEPLIPPAIIRQVADNLAACSAPMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYN-----KSGKVNPQFPYLLHLG 226
+ AV +AF+PN VK + D +GYA+YFSR IP++ K+ K Q P L H+G
Sbjct: 125 TLAVEITDEAEAFNPNAVKVITDKNGYALYFSRATIPWDRDNFAKADKAIVQ-PLLRHIG 183
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKI 285
I +Y + F+ Y P+ L+ E LEQL+VL +G K+ V + ++ GVD PED++ +
Sbjct: 184 IYAYRAGFINTYLDWQPSQLEKIECLEQLRVLWHGEKIHVAVALEAPPAGVDTPEDLKVV 243
Query: 286 ESFMRER 292
+ + ER
Sbjct: 244 QRIVAER 250
>gi|424047003|ref|ZP_17784564.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HENC-03]
gi|408884640|gb|EKM23376.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HENC-03]
Length = 252
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 103/243 (42%), Positives = 145/243 (59%), Gaps = 7/243 (2%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ASSR GKPL +I GKPMIQ +E++ A D +++ATDDE+++ +QFG
Sbjct: 6 VIPARYASSRLPGKPLADIGGKPMIQWVYEQALQAGAED-VIIATDDERVSAAAEQFGGK 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS + +GTER E ++K+ D IVVN+QGDEPLI P II V L +
Sbjct: 65 VCMTSPNHESGTERLAEVVEKMAIPADHIVVNVQGDEPLIPPSIIRQVADNLAGCDAPMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ----FPYLLHLGI 227
+ AV E+ F+PN VK V D GYA+YFSR IP+++ P + H+GI
Sbjct: 125 TLAVEIESEEEVFNPNAVKVVADERGYAMYFSRATIPWDRDNFAKQDKTVANPLMRHIGI 184
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKIE 286
+Y + F+ Y P+ L+ E LEQL+VL G K+ V + + A GVD PED+E +
Sbjct: 185 YAYRAGFINTYVNWQPSALEQIECLEQLRVLWYGEKIHVEVAKEAPAAGVDTPEDLEAVR 244
Query: 287 SFM 289
+ +
Sbjct: 245 AIV 247
>gi|189465878|ref|ZP_03014663.1| hypothetical protein BACINT_02241 [Bacteroides intestinalis DSM
17393]
gi|189434142|gb|EDV03127.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Bacteroides
intestinalis DSM 17393]
Length = 274
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 102/249 (40%), Positives = 150/249 (60%), Gaps = 10/249 (4%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR+AS+RF KPL + GK +IQR +E ++ LD VATDDE+I E +
Sbjct: 27 KFLGIIPARYASTRFPAKPLAMLGGKTVIQRVYE--QVVGILDDAYVATDDERIEEAVKA 84
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG V+MTS + ++GT+RC EA K+E +D++VNIQGDEP I+P ++ VKA
Sbjct: 85 FGGKVVMTSVNHKSGTDRCYEAYTKIEGDFDVIVNIQGDEPFIQPSQLE-TVKACFDDIA 143
Query: 169 AVFSTAVTSLKPEDAFDP----NRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF---PY 221
+T V PE+ F+ N K V++ + A+YFSR +IPY ++ + Y
Sbjct: 144 TQIATLVKPFTPENGFEALENINSPKVVLNKNMNALYFSRSIIPYQRNVEKQDWLKNHTY 203
Query: 222 LLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPED 281
H+G+ +Y + LK L + L+L E LEQL+ LENGY +K + E G+D P+D
Sbjct: 204 YKHIGLYAYRAEVLKEITSLPQSSLELAESLEQLRWLENGYTIKAGITEVETIGIDTPQD 263
Query: 282 VEKIESFMR 290
+EK E F++
Sbjct: 264 LEKAEEFLK 272
>gi|86146934|ref|ZP_01065252.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio sp. MED222]
gi|218710039|ref|YP_002417660.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio splendidus
LGP32]
gi|85835184|gb|EAQ53324.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio sp. MED222]
gi|218323058|emb|CAV19235.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio splendidus
LGP32]
Length = 248
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 103/245 (42%), Positives = 148/245 (60%), Gaps = 11/245 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ SSR GKPL +I GKPMIQ +E+S A D++++ATDD ++ + + FGA
Sbjct: 6 VIPARYQSSRLPGKPLADIGGKPMIQWVYEQSMKAGA-DNVIIATDDARVEKAAKAFGAT 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKAL--QAAPDA 169
V MTS + +GTER E ++ ++ D I+VN+QGDEPLI P II+ V L AP A
Sbjct: 65 VCMTSPNHESGTERLAEVIEVMKIPDDHIIVNVQGDEPLIPPAIINQVANNLANSTAPMA 124
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVN----PQFPYLLHL 225
+T ++ F+PN VK V D GYA+YFSR IP+++ N + P L H+
Sbjct: 125 TLGVEIT--HADEVFNPNAVKVVTDKDGYALYFSRATIPWDRDAYANNGTAAESPLLRHI 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI +Y + F+ Y P+ L+ E LEQL+VL G K+ V + + A GVD PED+E
Sbjct: 183 GIYAYRAGFINTYINWEPSTLERIECLEQLRVLWYGEKIHVDVAAEAPAAGVDTPEDLEA 242
Query: 285 IESFM 289
+ + +
Sbjct: 243 VRAII 247
>gi|312144458|ref|YP_003995904.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Halanaerobium
hydrogeniformans]
gi|311905109|gb|ADQ15550.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Halanaerobium
hydrogeniformans]
Length = 248
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 98/245 (40%), Positives = 144/245 (58%), Gaps = 3/245 (1%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +IPAR+ SSRF K L I GK M+ R E + + +D ++VATDD++I +
Sbjct: 5 KTAAVIPARYDSSRFPAKALAKIAGKEMVVRVMEAVQKSELIDEVIVATDDQRIKVVVEA 64
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
G +MTS + GT+R EA + +E D++VN+QGDEPLI+ E I +K Q +
Sbjct: 65 NGGRAVMTSSEHQTGTDRIAEAAEGIEA--DLIVNVQGDEPLIKKETIAQAIKPFQEEKN 122
Query: 169 AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQ 228
ST L P+ A +P+ VK VVD YA+YFSR IPY + + + Y H+G+
Sbjct: 123 LKMSTLKRRLDPKKAANPDIVKVVVDQDDYALYFSRSPIPYYRDDEKKAK-EYFQHIGLY 181
Query: 229 SYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESF 288
Y +FL Y + T L+ E LEQL+VLE+G K+KVI+ + + GVD ED+E +E
Sbjct: 182 VYRRDFLLDYSAMSSTTLEKAESLEQLRVLESGVKIKVIETEAKLIGVDRKEDIELVEKE 241
Query: 289 MRERN 293
+++RN
Sbjct: 242 LKKRN 246
>gi|149912946|ref|ZP_01901480.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Roseobacter sp.
AzwK-3b]
gi|149813352|gb|EDM73178.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Roseobacter sp.
AzwK-3b]
Length = 266
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 108/263 (41%), Positives = 154/263 (58%), Gaps = 22/263 (8%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILG-----KPMIQRTWERSKLATTLDHLVVATDDEKIA 103
R + +IPAR+ASSR+ GKPLV + G K +IQR+WE + +VVATDD++I
Sbjct: 2 RALIVIPARYASSRYPGKPLVELTGASGAKKSLIQRSWEAACKVGGNHRVVVATDDDRIR 61
Query: 104 ECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKAL 163
+ + FGA+V MTSE+CRNGTERC EA + L YDIVVN+QGD PL ++ +++AL
Sbjct: 62 QAAEGFGAEVAMTSEACRNGTERCAEAHEVLGGGYDIVVNLQGDAPLTPHWFVEALIEAL 121
Query: 164 QAAPDAVFSTAVTSL--KPEDAFDPNR-------VKCVVDNHGYAIYFSRGLIPY-NKSG 213
+A +T V + + F +R V D G+A+YFS+ +IPY +KS
Sbjct: 122 GNDAEAGMATPVLRCDGRALNGFLEDRRAGRVGGTTAVFDTGGHALYFSKEVIPYTSKSY 181
Query: 214 KVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEA 273
P H+G+ +Y + L YPG PL+ E LEQL+ LENG ++ ++V EA
Sbjct: 182 DDAEATPVFHHVGVYAYRAAALSAYPGWSEGPLEGLEGLEQLRFLENGRAVRCVEV--EA 239
Query: 274 HG-----VDAPEDVEKIESFMRE 291
G ++ PEDV +IE M+E
Sbjct: 240 RGRQFWELNNPEDVPRIERMMKE 262
>gi|220932728|ref|YP_002509636.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Halothermothrix
orenii H 168]
gi|219994038|gb|ACL70641.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Halothermothrix
orenii H 168]
Length = 241
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 103/241 (42%), Positives = 148/241 (61%), Gaps = 7/241 (2%)
Query: 50 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQF 109
V+ +IPARF SSRF GKPL +I GKPMI+ + R L + VATDD++I + F
Sbjct: 3 VIAVIPARFYSSRFPGKPLADIKGKPMIEHVYRRVCRVKGLKEVYVATDDDRIYNTVKDF 62
Query: 110 GADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
G + +MTS++C +GT+R E + L+ DIVVN+QGDEPL+EP +++ +K +
Sbjct: 63 GGNAVMTSKACSSGTDRVAEVVANLD--CDIVVNVQGDEPLLEPLMVEQALKPFAEEKNL 120
Query: 170 VFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQ 228
ST + + P + +PN VK VVD GYA+YFSR IP+ + N Y H+G+
Sbjct: 121 NMSTLMKEIGDPGEVENPNVVKVVVDKDGYALYFSRSPIPHPR----NSGARYYKHIGLY 176
Query: 229 SYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESF 288
Y FL + T L+ E LEQL+VLENGYK+KV++ + ++ GVD PED+ ++E
Sbjct: 177 IYRRKFLMNLTQMEQTELEKVESLEQLRVLENGYKIKVVETEFDSIGVDTPEDIARVEKI 236
Query: 289 M 289
M
Sbjct: 237 M 237
>gi|417781686|ref|ZP_12429434.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
weilii str. 2006001853]
gi|410778166|gb|EKR62796.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
weilii str. 2006001853]
Length = 246
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 106/246 (43%), Positives = 140/246 (56%), Gaps = 7/246 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+++G+IPAR+ASSRF GKPL I K MI+ T+ + +T L LVVATDD +I +
Sbjct: 3 KILGVIPARYASSRFPGKPLAKIGDKTMIEWTYRNASRSTALSELVVATDDTRIHDVVLA 62
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG + +MT +GT+R E + +Y +VVNIQGDEP IEPE+IDGV + P+
Sbjct: 63 FGGNSVMTRADHISGTDRIIEVANRF-PEYSVVVNIQGDEPGIEPELIDGVASLKASHPE 121
Query: 169 AVFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
STA L DPNRVK ++D +G AIYFSR LIP + P HLGI
Sbjct: 122 WEMSTAAVPLIDFSHGEDPNRVKVIIDRNGKAIYFSRSLIP----SQFKRAVPLYRHLGI 177
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVE-KIE 286
YD +FL Y L + L+ E LEQL+ +E GY + V VD P D+E IE
Sbjct: 178 YGYDRDFLLKYNSLPKSNLEESESLEQLRAIEAGYGIGVYLSQEAGLSVDTPADLEIVIE 237
Query: 287 SFMRER 292
F + +
Sbjct: 238 DFKKRK 243
>gi|319775001|ref|YP_004137489.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Haemophilus
influenzae F3047]
gi|317449592|emb|CBY85797.1| 3-deoxy-D-manno-octulosonic acid cytidylyltransferase [Haemophilus
influenzae F3047]
Length = 254
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 107/247 (43%), Positives = 149/247 (60%), Gaps = 11/247 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPARFASSR GKPL +I GKPMIQ +E++ L + +++ATD+E +A+ + FGA+
Sbjct: 6 IIPARFASSRLPGKPLADIAGKPMIQHVFEKA-LQSGASRVIIATDNENVADVAKNFGAE 64
Query: 113 VIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS + +GTER E ++KL +I+VNIQGDEPLI P I+ V L +
Sbjct: 65 VCMTSVNHNSGTERLAEVVEKLAIPDNEIIVNIQGDEPLIPPVIVRQVADNLAKFNVNMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ--------FPYLL 223
S AV E+ F+PN VK + D GY +YFSR +IPY++ +N Q YL
Sbjct: 125 SLAVKIHDAEELFNPNAVKVLTDKDGYVLYFSRSVIPYDRDQFLNLQDVQKVQLADAYLR 184
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDV 282
H+GI +Y + F+K Y PT L+ E LEQL+VL NG ++ V + + GVD ED+
Sbjct: 185 HIGIYAYRAGFIKQYVQWAPTQLENLEKLEQLRVLYNGERIHVELAKEVPTVGVDTAEDL 244
Query: 283 EKIESFM 289
EK+ +
Sbjct: 245 EKVRLIL 251
>gi|325578728|ref|ZP_08148775.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Haemophilus
parainfluenzae ATCC 33392]
gi|325159552|gb|EGC71684.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Haemophilus
parainfluenzae ATCC 33392]
Length = 254
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 106/247 (42%), Positives = 150/247 (60%), Gaps = 11/247 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPARFASSR GKPL +I G PMIQ +E+++ + +++ATD+E++ + + FGA+
Sbjct: 8 IIPARFASSRLPGKPLADIAGNPMIQHVFEKAQ-QSGASRVIIATDNEQVEKAAKAFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTSE+ +GTER E + KL D I+VNIQGDEPLI P I+ V + L +
Sbjct: 67 VCMTSEAHNSGTERLAEVVSKLGIADDEIIVNIQGDEPLIPPVIVSQVAENLAKFNVNMA 126
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK--------SGKVNPQFPYLL 223
+ AV + E+ F+PN VK V D GY +YFSR +IPY++ + K YL
Sbjct: 127 TLAVKIHEAEELFNPNAVKVVTDKDGYVLYFSRSVIPYDRDQFMQLEDTSKAQLANAYLR 186
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDV 282
H+GI +Y + F+K Y PT L+ E LEQL+VL G ++ V + + A GVD ED+
Sbjct: 187 HIGIYAYRAGFIKQYVQWVPTQLENLEKLEQLRVLWYGERIHVELAKEVPAVGVDTAEDL 246
Query: 283 EKIESFM 289
EK+ S +
Sbjct: 247 EKVRSIL 253
>gi|378696128|ref|YP_005178086.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Haemophilus
influenzae 10810]
gi|301168651|emb|CBW28242.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Haemophilus
influenzae 10810]
Length = 254
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 107/243 (44%), Positives = 148/243 (60%), Gaps = 11/243 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPARFASSR GKPL +I GKPMIQ +E++ L + +++ATD+E +A+ + FG +
Sbjct: 6 IIPARFASSRLPGKPLADIAGKPMIQHVFEKA-LQSGASRVIIATDNENVADVAKSFGTE 64
Query: 113 VIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS + +GTER E ++KL +I+VNIQGDEPLI P I+ V L +
Sbjct: 65 VCMTSVNHNSGTERLAEVVEKLAIPDNEIIVNIQGDEPLIPPVIVRQVADNLAKFNVNMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ--------FPYLL 223
S AV E+ F+PN VK + D GY +YFSR +IPY++ +N Q YL
Sbjct: 125 SLAVKIHDAEELFNPNAVKVLTDKDGYVLYFSRSVIPYDRDQFMNLQDVQKVQLADAYLR 184
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDV 282
H+GI +Y + F+K Y PT L+ E LEQL+VL NG ++ V + + A GVD ED+
Sbjct: 185 HIGIYAYRAGFIKQYVQWAPTQLENLEKLEQLRVLYNGERIHVELAKEVPAVGVDTAEDL 244
Query: 283 EKI 285
EK+
Sbjct: 245 EKV 247
>gi|417951798|ref|ZP_12594883.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio splendidus
ATCC 33789]
gi|342803750|gb|EGU39099.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio splendidus
ATCC 33789]
Length = 248
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 102/245 (41%), Positives = 149/245 (60%), Gaps = 11/245 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ SSR GKPL +I GKPM+Q +E+S A D++++ATDD ++ + + FGA
Sbjct: 6 VIPARYQSSRLPGKPLADIGGKPMVQWVYEQSMKAGA-DNVIIATDDARVEKAAKAFGAT 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKAL--QAAPDA 169
V MTS + +GTER E ++ + D I+VN+QGDEPLI P II+ V L AP A
Sbjct: 65 VCMTSPNHESGTERLAEVIEVMNIPDDHIIVNVQGDEPLIPPAIINQVANNLANSTAPMA 124
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVN----PQFPYLLHL 225
++ + ++ F+PN VK V D GYA+YFSR IP+++ N + P L H+
Sbjct: 125 TLGVEISHV--DEVFNPNAVKVVTDKDGYALYFSRATIPWDRDAYANNGTAAESPLLRHI 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI +Y + F+ Y P+ L+ E LEQL+VL G K+ V + V+ A GVD PED+E
Sbjct: 183 GIYAYRAGFINTYINWEPSTLERIECLEQLRVLWYGEKIHVDVAVEAPAAGVDTPEDLEA 242
Query: 285 IESFM 289
+ + +
Sbjct: 243 VRAII 247
>gi|294674006|ref|YP_003574622.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Prevotella
ruminicola 23]
gi|294474053|gb|ADE83442.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Prevotella
ruminicola 23]
Length = 248
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 98/245 (40%), Positives = 148/245 (60%), Gaps = 7/245 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ + IIPAR+AS+R+ GKPL + GK +IQR +E+ K + LD + VATDD++I +
Sbjct: 2 KFMAIIPARYASTRYPGKPLAILGGKSVIQRVYEQVK--SVLDEVYVATDDQRIFDAVTA 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG +MT ++GT+R EA +K+ D+++N+QGDEP I+P I+ ++ L AP+
Sbjct: 60 FGGQAVMTRADHKSGTDRIEEAAEKIGSDADVIINVQGDEPFIQPSQIETLMH-LFDAPE 118
Query: 169 AVFSTAVTSLKPEDAFD-PNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF---PYLLH 224
T + +A + PN K V DN G+A+YFSR +IPY + + N F P+L H
Sbjct: 119 TQIGTLGKLFESIEAIENPNSPKIVTDNRGFALYFSRSVIPYIRGKERNEWFGEYPFLKH 178
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEK 284
LGI +Y L L + L+ E LEQL+ L+NGY+++V D E G+D PED+ +
Sbjct: 179 LGIYAYRREVLAEVTKLPQSSLEKAESLEQLRWLQNGYRIRVGMTDIETVGIDTPEDLTR 238
Query: 285 IESFM 289
E F+
Sbjct: 239 AEEFL 243
>gi|209809506|ref|YP_002265044.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Aliivibrio
salmonicida LFI1238]
gi|238056513|sp|B6ES02.1|KDSB_ALISL RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|208011068|emb|CAQ81486.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Aliivibrio
salmonicida LFI1238]
Length = 249
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 105/243 (43%), Positives = 146/243 (60%), Gaps = 7/243 (2%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR+ S+R GKPL +I GKPMIQ +E++ A D +++ATDD +I + FG D
Sbjct: 6 IIPARYQSTRLPGKPLADICGKPMIQWVYEQASKAGA-DRVIIATDDSRIEAVVKGFGGD 64
Query: 113 VIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS + +GTER E + K +IVVN+QGDEPLI P II V K L + +
Sbjct: 65 VCMTSPNHESGTERLAEVIDKCGIASNEIVVNVQGDEPLIPPSIIRQVAKNLADSIAPMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS----GKVNPQFPYLLHLGI 227
+ AVT + ED F+PN VK V D GYA+YFSR IP+++ G+ P L H+GI
Sbjct: 125 TLAVTIDEEEDVFNPNAVKVVTDAEGYALYFSRAAIPWDRDAFAKGEALTANPLLRHIGI 184
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKIE 286
+Y + F+ Y P+ L+ E LEQL+VL G K+ V + + A GVD ED++K+
Sbjct: 185 YAYRAGFINTYINWQPSVLEKIECLEQLRVLWYGEKIHVAVAKEAPAAGVDTQEDLDKVR 244
Query: 287 SFM 289
+ +
Sbjct: 245 AIL 247
>gi|325276000|ref|ZP_08141824.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas sp.
TJI-51]
gi|324098866|gb|EGB96888.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas sp.
TJI-51]
Length = 254
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 102/246 (41%), Positives = 141/246 (57%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR S+R GKPL+ I GKPM+Q WE+++ + +V+ATDD I E CQ FGA+
Sbjct: 8 VIPARLRSTRLPGKPLLAIAGKPMVQHVWEQAR-KSAASRVVIATDDASIFEACQAFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V+MT +GT+R E +L D IVVN+QGDEPLI P IID V L A P A
Sbjct: 67 VLMTRVDHESGTDRLAEVATQLGLAADAIVVNVQGDEPLIPPVIIDQVAANLAAHPQAAI 126
Query: 172 STAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ------FPYLLH 224
+T + +PE F+PN VK V D HG A+ FSR +P+ + Q PY H
Sbjct: 127 ATLAEQIHEPETVFNPNAVKVVSDKHGLALSFSRAPLPWARDTFAKGQDQLPAGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVE 283
+G+ +Y FL + P L+ E LEQL+ L +G ++ V ++ A GVD PED+E
Sbjct: 187 IGMYAYRVGFLHDFVSWGPCWLEQTEALEQLRALWHGVRIHVEDAIEAPAVGVDTPEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|424036857|ref|ZP_17775786.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HENC-02]
gi|408896182|gb|EKM32341.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HENC-02]
Length = 252
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 104/243 (42%), Positives = 145/243 (59%), Gaps = 7/243 (2%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ASSR GKPL +I GKPMIQ +E++ A D +++ATDDE+++ +QFG
Sbjct: 6 VIPARYASSRLPGKPLADIGGKPMIQWVYEQALQAGAED-VIIATDDERVSVAAEQFGGK 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS + +GTER E ++K+ D IVVN+QGDEPLI P II V L +
Sbjct: 65 VCMTSPNHESGTERLAEVVEKMAIPADHIVVNVQGDEPLIPPSIIRQVADNLAGCDAPMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ----FPYLLHLGI 227
+ AV E+ F+PN VK V D GYA+YFSR IP+++ P + H+GI
Sbjct: 125 TLAVEIESEEEVFNPNAVKVVADERGYAMYFSRATIPWDRDNFAKQDKTIANPLMRHIGI 184
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKIE 286
+Y + F+ Y P+ L+ E LEQL+VL G K+ V + + A GVD PED+E I
Sbjct: 185 YAYRAGFINTYVNWQPSALEQIECLEQLRVLWYGEKIHVEVAKEAPAAGVDTPEDLEAIR 244
Query: 287 SFM 289
+ +
Sbjct: 245 AIV 247
>gi|198277195|ref|ZP_03209726.1| hypothetical protein BACPLE_03404 [Bacteroides plebeius DSM 17135]
gi|198269693|gb|EDY93963.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Bacteroides
plebeius DSM 17135]
Length = 253
Score = 184 bits (466), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 103/252 (40%), Positives = 145/252 (57%), Gaps = 10/252 (3%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR+AS+RF KPL + GKP+IQR +E ++ LD VATDDE+I +
Sbjct: 2 KFIGIIPARYASTRFPAKPLALLGGKPVIQRVYE--QVTGVLDEAYVATDDERIEAAVKA 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG V+MTS ++GT+RC EA K+ YD+VVNIQGDEP I+ ++ V A
Sbjct: 60 FGGKVVMTSVDHKSGTDRCYEAYCKVGSGYDVVVNIQGDEPFIQRSQLEAVKACFDDAST 119
Query: 169 AVFSTAVTSLKPEDAFDP----NRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP---Y 221
+ +T V P D FD N K VV+ A+YFSR +IPY ++ Y
Sbjct: 120 QI-ATLVKPFTPADGFDALENVNSPKVVVNKEMKALYFSRSIIPYQRNRDKKEWLAGHTY 178
Query: 222 LLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPED 281
H+G+ +Y + LK L + L+L E LEQL+ LENGY +KV + E G+D P+D
Sbjct: 179 YKHIGLYAYRAPVLKEITSLPQSSLELAESLEQLRWLENGYSIKVGISEVETIGIDTPQD 238
Query: 282 VEKIESFMRERN 293
+ + E F+R +
Sbjct: 239 LARAEEFLRNQQ 250
>gi|313147034|ref|ZP_07809227.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bacteroides
fragilis 3_1_12]
gi|424663430|ref|ZP_18100467.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bacteroides
fragilis HMW 616]
gi|313135801|gb|EFR53161.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bacteroides
fragilis 3_1_12]
gi|404577120|gb|EKA81858.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bacteroides
fragilis HMW 616]
Length = 252
Score = 184 bits (466), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 106/256 (41%), Positives = 154/256 (60%), Gaps = 16/256 (6%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR+AS+RF KPL + GK +IQR +E+ +A LD VATDDE+I +
Sbjct: 2 KFLGIIPARYASTRFPAKPLAMLGGKTVIQRVYEQ--VAGVLDDAYVATDDERIEAAVKA 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG VIMTS + ++GT+RC EA K+ +D+VVNIQGDEP I+P +KA++A +
Sbjct: 60 FGGKVIMTSVNHKSGTDRCYEACTKIGGDFDVVVNIQGDEPFIQP----SQLKAVKACFE 115
Query: 169 AVFSTAVTSLKPEDAFDP-------NRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF-- 219
V + T +KP A D N K V++ + A+YFSR +IPY ++
Sbjct: 116 DVSTQIATLVKPFPADDELAVLENVNSPKVVLNKNMNALYFSRSVIPYQRNADKKDWLKN 175
Query: 220 -PYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDA 278
Y H+G+ +Y + LK L + L+L E LEQL+ LENGY +KV + E G+D
Sbjct: 176 HTYYKHIGLYAYRTEVLKEITSLPQSSLELAESLEQLRWLENGYTIKVGISEVETIGIDT 235
Query: 279 PEDVEKIESFMRERNL 294
P+D+E+ E F+++ NL
Sbjct: 236 PQDLEEAEKFLQKNNL 251
>gi|419801300|ref|ZP_14326535.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Haemophilus
parainfluenzae HK262]
gi|385193864|gb|EIF41212.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Haemophilus
parainfluenzae HK262]
Length = 252
Score = 184 bits (466), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 106/247 (42%), Positives = 150/247 (60%), Gaps = 11/247 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPARFASSR GKPL +I G PMIQ +E+++ + +++ATD+E++ + + FGA+
Sbjct: 6 IIPARFASSRLPGKPLADIAGNPMIQHVFEKAQ-QSGASRVIIATDNEQVEKAAKAFGAE 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTSE+ +GTER E + KL D I+VNIQGDEPLI P I+ V + L +
Sbjct: 65 VCMTSEAHNSGTERLAEVVSKLGIADDEIIVNIQGDEPLIPPVIVSQVAENLAKFNVNMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK--------SGKVNPQFPYLL 223
+ AV + E+ F+PN VK V D GY +YFSR +IPY++ + K YL
Sbjct: 125 TLAVKIHEAEELFNPNAVKVVTDKDGYVLYFSRSVIPYDRDQFMQLEDTSKAQLANAYLR 184
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDV 282
H+GI +Y + F+K Y PT L+ E LEQL+VL G ++ V + + A GVD ED+
Sbjct: 185 HIGIYAYRAGFIKQYVQWVPTQLENLEKLEQLRVLWYGERIHVELAKEVPAVGVDTAEDL 244
Query: 283 EKIESFM 289
EK+ S +
Sbjct: 245 EKVRSIL 251
>gi|333384059|ref|ZP_08475703.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Dysgonomonas gadei
ATCC BAA-286]
gi|332826940|gb|EGJ99737.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Dysgonomonas gadei
ATCC BAA-286]
Length = 250
Score = 184 bits (466), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 101/254 (39%), Positives = 150/254 (59%), Gaps = 16/254 (6%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ + IIPAR+AS+RF GKPL ++ G PMIQR +E+ K A +D + VATDD +I E +
Sbjct: 2 KFIAIIPARYASTRFPGKPLADMAGMPMIQRVYEQVKKA--IDEVWVATDDPRIFEVVES 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAA-- 166
FG +MTS ++GT+R EA K+ +D+++N+QGDEP I+P G ++AL+
Sbjct: 60 FGGKAVMTSPDHKSGTDRIQEAYAKVGDGFDVIINVQGDEPFIQP----GQIEALKNCFD 115
Query: 167 -PDAVFSTAVTSLKPEDAFD----PNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNP---Q 218
D +T V K ED F+ PN K VV+ AIYFSR ++PY + +
Sbjct: 116 NKDVELATLVKPFKKEDGFEVLFNPNSPKVVVNKKNEAIYFSRSIVPYIRDAHHTEWLDK 175
Query: 219 FPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDA 278
+ H+G+ +Y S+ L L + L+ E LEQL+ +ENGY+++V D E G+D
Sbjct: 176 HTFFKHIGMYAYRSDILNEITRLPQSLLEKAESLEQLRWIENGYRIRVGYTDAETIGIDT 235
Query: 279 PEDVEKIESFMRER 292
PED+EK +F+ R
Sbjct: 236 PEDMEKALAFLGSR 249
>gi|148982460|ref|ZP_01816765.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrionales
bacterium SWAT-3]
gi|145960466|gb|EDK25842.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrionales
bacterium SWAT-3]
Length = 248
Score = 184 bits (466), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 103/245 (42%), Positives = 148/245 (60%), Gaps = 11/245 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ SSR GKPL +I GKPMIQ +E+S A D++++ATDD ++ + + FGA
Sbjct: 6 VIPARYQSSRLPGKPLADIGGKPMIQWVYEQSMKAGA-DNVIIATDDARVEKAAKAFGAT 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKAL--QAAPDA 169
V MTS + +GTER E + + D I+VN+QGDEPLI P II+ V L AP A
Sbjct: 65 VCMTSPNHESGTERLAEVIDVMNIPDDHIIVNVQGDEPLIPPAIINQVANNLANSTAPMA 124
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVN----PQFPYLLHL 225
++ + ++ F+PN VK V D GYA+YFSR IP+++ N + P L H+
Sbjct: 125 TLGVEISHV--DEVFNPNAVKVVTDKDGYALYFSRATIPWDRDAYANNGTAAESPLLRHI 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI +Y + F+ Y P+ L+ E LEQL+VL G K+ V + V+ A GVD PED+E
Sbjct: 183 GIYAYRAGFINTYINWEPSTLERIECLEQLRVLWYGEKIHVDVAVEAPAAGVDTPEDLEA 242
Query: 285 IESFM 289
+ + +
Sbjct: 243 VRAII 247
>gi|345890233|ref|ZP_08841176.1| hypothetical protein HMPREF0178_03950 [Bilophila sp. 4_1_30]
gi|345038709|gb|EGW43101.1| hypothetical protein HMPREF0178_03950 [Bilophila sp. 4_1_30]
Length = 326
Score = 184 bits (466), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 107/273 (39%), Positives = 157/273 (57%), Gaps = 7/273 (2%)
Query: 24 IVAGAAIAVAVGARAYL-GRSKNFRSRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWE 82
+ G G RA G N GIIPAR+ SSRF GKPL +I G+PM +
Sbjct: 52 VYCGKEYCYTCGERALAHGGEMNTSIPCYGIIPARYDSSRFPGKPLADIWGRPMFWHVYA 111
Query: 83 RSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIV 141
+K A+ L ++V+ATDDE+IAE ++ +MT +GT+R EA KL + + ++
Sbjct: 112 HAKRASVLRNIVLATDDERIAEAALEWEIPCVMTRRDHASGTDRVFEAASKLGVEPHAVI 171
Query: 142 VNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 201
VNIQGDEP ++P +I+ +V+ V ST T + PE A PN+VK V +G A+Y
Sbjct: 172 VNIQGDEPALDPAVIEQLVRPFLDGTVQV-STLATPISPERAASPNQVKVVTAANGDALY 230
Query: 202 FSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENG 261
FSR IP+++ G L H+G+ ++ L+ + L +PL+ E LEQL+ LENG
Sbjct: 231 FSRSRIPFDREGGDG---EILGHIGLYAFRMGALERFVSLPQSPLEKREKLEQLRFLENG 287
Query: 262 YKMKVIKVD-HEAHGVDAPEDVEKIESFMRERN 293
++V++V+ +EAHGVD PED+E I + E
Sbjct: 288 VPIRVVRVEGYEAHGVDTPEDLETIRELLAEHT 320
>gi|149192130|ref|ZP_01870352.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio shilonii
AK1]
gi|148834033|gb|EDL51048.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio shilonii
AK1]
Length = 251
Score = 184 bits (466), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 104/247 (42%), Positives = 148/247 (59%), Gaps = 8/247 (3%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR+ SSR GKPL +I GKPMIQ +E+S L + D +++ATDD+++ +QFGA+
Sbjct: 6 IIPARYESSRLPGKPLADIGGKPMIQHVYEKS-LHSGADRVIIATDDQRVELAAKQFGAE 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS S +GTER E + ++ D IVVN+QGDEPLI II V L+++ +
Sbjct: 65 VCMTSPSHESGTERLAEVVASMKIAPDHIVVNVQGDEPLIPACIIKQVANNLESSTAPMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSG-----KVNPQFPYLLHLG 226
+ VT + F+PN VK V D GYA+YFSR IP+++ K P L H+G
Sbjct: 125 TLGVTIENESEVFNPNAVKVVTDEQGYALYFSRATIPWDRDAYAAEPKKRATNPLLRHIG 184
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKV-DHEAHGVDAPEDVEKI 285
I +Y + F+K Y P+ L+ E LEQL+VL G K+ V + GVD PED+E +
Sbjct: 185 IYAYRAGFIKTYVEWEPSALERIECLEQLRVLWYGEKIHVATAQEAPPAGVDTPEDLEHV 244
Query: 286 ESFMRER 292
+ + ++
Sbjct: 245 RAIVAQQ 251
>gi|319789694|ref|YP_004151327.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Thermovibrio
ammonificans HB-1]
gi|317114196|gb|ADU96686.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Thermovibrio
ammonificans HB-1]
Length = 245
Score = 184 bits (466), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 102/243 (41%), Positives = 151/243 (62%), Gaps = 8/243 (3%)
Query: 48 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQ 107
+R+V +IPAR S+R KPL+ + GKP+I +R+KL T D+++VATD ++A +
Sbjct: 2 NRLVVVIPARIGSTRLPRKPLIRLAGKPLIWWVVKRAKLFT--DNVLVATDSVEVARVAK 59
Query: 108 QFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
+ GA MT +GT+R A++ +E ++ V+N+QGDEPL+ PE + V+K L+A
Sbjct: 60 EAGARAAMTPSELPSGTDRVYRAVKGIECRF--VINLQGDEPLVTPEHLKAVLKGLEAG- 116
Query: 168 DAVFSTAVTSLK-PEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLG 226
A FST T + E+ DP++VK V D+ G+A+YFSR IPY + G++ P YL HLG
Sbjct: 117 -ANFSTVATPFRSAEEVKDPSKVKVVTDSSGFALYFSRSPIPYTRDGEIEPG-NYLKHLG 174
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIE 286
I Y L+ + L+ E LEQL++LENG ++KV V+ E HGVD P DVEK+
Sbjct: 175 IYGYTKEALEKFVNWPVGRLEGLEKLEQLRILENGERIKVELVEKELHGVDTPRDVEKVN 234
Query: 287 SFM 289
+
Sbjct: 235 KIL 237
>gi|407071816|ref|ZP_11102654.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio
cyclitrophicus ZF14]
Length = 248
Score = 184 bits (466), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 103/245 (42%), Positives = 148/245 (60%), Gaps = 11/245 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ SSR GKPL +I GKPMIQ +E+S A D++++ATDD ++ + + FGA
Sbjct: 6 VIPARYQSSRLPGKPLADIGGKPMIQWVYEQSMKAGA-DNVIIATDDARVEKAVKAFGAT 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKAL--QAAPDA 169
V MTS + +GTER E ++ + D I+VN+QGDEPLI P II+ V L AP A
Sbjct: 65 VCMTSPNHESGTERLAEVIEVMNIPDDHIIVNVQGDEPLIPPAIINQVANNLANSTAPMA 124
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVN----PQFPYLLHL 225
+T ++ F+PN VK V D GYA+YFSR IP+++ N + P L H+
Sbjct: 125 TLGVEIT--HADEVFNPNAVKVVTDKDGYALYFSRATIPWDRDAYANNGTAAKSPLLRHI 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI +Y + F+ Y P+ L+ E LEQL+VL G K+ V + ++ A GVD PED+E
Sbjct: 183 GIYAYRAGFINTYINWEPSTLERIECLEQLRVLWYGEKIHVDVAMEAPAAGVDTPEDLEA 242
Query: 285 IESFM 289
+ + +
Sbjct: 243 VRAII 247
>gi|260582024|ref|ZP_05849819.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Haemophilus
influenzae NT127]
gi|260094914|gb|EEW78807.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Haemophilus
influenzae NT127]
Length = 254
Score = 184 bits (466), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 107/243 (44%), Positives = 148/243 (60%), Gaps = 11/243 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPARFASSR GKPL +I GK MIQ +E++ L + +++ATD+E +A+ + FGA+
Sbjct: 6 IIPARFASSRLSGKPLADIAGKSMIQHVFEKA-LQSGASRVIIATDNENVADVAKSFGAE 64
Query: 113 VIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS + +GTER E ++KL +I+VNIQGDEPLI P I+ V L +
Sbjct: 65 VCMTSVNHNSGTERLAEVVEKLAIPDNEIIVNIQGDEPLIPPVIVRQVADNLAKFNVNMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ--------FPYLL 223
S AV E+ F+PN VK + D GY +YFSR +IPY++ +N Q YL
Sbjct: 125 SLAVKIHDTEELFNPNAVKVLTDKDGYVLYFSRSVIPYDRDQFMNLQDIQKVQLSDAYLR 184
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDV 282
H+GI +Y + F+K Y PT L+ E LEQL+VL NG ++ V + + A GVD ED+
Sbjct: 185 HIGIYAYRAGFIKQYVQWAPTQLENLEKLEQLRVLYNGERIHVELAKEVPAVGVDTAEDL 244
Query: 283 EKI 285
EK+
Sbjct: 245 EKV 247
>gi|167753115|ref|ZP_02425242.1| hypothetical protein ALIPUT_01386 [Alistipes putredinis DSM 17216]
gi|167659429|gb|EDS03559.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Alistipes
putredinis DSM 17216]
Length = 251
Score = 184 bits (466), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 99/247 (40%), Positives = 144/247 (58%), Gaps = 10/247 (4%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPAR+AS+RF GKPL + GKP+I+R +E ++ L VVATDDE+I ++FG
Sbjct: 4 VAIIPARYASTRFPGKPLAMLGGKPVIRRVYE--QVTGVLPDAVVATDDERILRAVEEFG 61
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAV 170
+MTS R+GT+RC EA KL ++YD V+N+QGDEP I PE + +++ P
Sbjct: 62 GRAVMTSSEHRSGTDRCWEAYGKLGREYDAVINVQGDEPFIRPEQLRAIMRCFD-VPGTD 120
Query: 171 FSTAVTSLKPEDAF----DPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVN---PQFPYLL 223
+T V D +PN K V+D AIYFSR +IPY + + + + +
Sbjct: 121 IATLVRPFAESDGLAALENPNSPKVVLDGESRAIYFSRSVIPYLRGVERSEWLAKHTFYK 180
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVE 283
H+G+ ++ + L L P+ L+ E LEQL+ LENGY++ V D E G+D PED+
Sbjct: 181 HIGMYAFRTKVLAEVTALPPSSLEKAESLEQLRWLENGYRIGVGISDVETIGIDTPEDLA 240
Query: 284 KIESFMR 290
E F++
Sbjct: 241 AAEEFLK 247
>gi|383765513|ref|YP_005444494.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Phycisphaera
mikurensis NBRC 102666]
gi|381385781|dbj|BAM02597.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Phycisphaera
mikurensis NBRC 102666]
Length = 278
Score = 183 bits (465), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 103/258 (39%), Positives = 147/258 (56%), Gaps = 27/258 (10%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
RV+ ++PARFAS+RF GKPL + GKP+I+ ER A ++ +VVATDDE+I E
Sbjct: 7 RVLAVLPARFASTRFPGKPLADDTGKPLIRHVVERVAEARSVHRVVVATDDERIREAVGA 66
Query: 109 FGADVIMTSESCRNGTERCNEALQKLE----KKYDIVVNIQGDEPLIEPEIIDGVVKALQ 164
FGA+ +MT E NGT R EA+ LE + +D+V+N+QGDEP + ID +V L
Sbjct: 67 FGAEAVMTGEHD-NGTSRIAEAVDALEAGGGEPFDVVLNVQGDEPEVPAATIDALVMGLI 125
Query: 165 AAPDAVFSTAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYN------------- 210
A PDA +T + +P ED + N VK V D G+A+YFSR L+P++
Sbjct: 126 ARPDADMATLASVFEPGEDPANTNIVKLVADRRGFAMYFSRSLVPFDRDAERLGRRPGMT 185
Query: 211 ---KSGKVNPQFPY-----LLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGY 262
+ G +P + H G+ +Y FL+ Y L P PL+ E LEQL+VLE+G+
Sbjct: 186 DPARGGGSHPGWTLPGPGPFKHPGLYAYRRAFLRTYASLPPAPLEETEKLEQLRVLEHGH 245
Query: 263 KMKVIKVDHEAHGVDAPE 280
++ V+ G+D PE
Sbjct: 246 RIAVVLAAAPHPGIDTPE 263
>gi|423277321|ref|ZP_17256235.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bacteroides
fragilis HMW 610]
gi|404587070|gb|EKA91620.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bacteroides
fragilis HMW 610]
Length = 252
Score = 183 bits (465), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 106/256 (41%), Positives = 154/256 (60%), Gaps = 16/256 (6%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR+AS+RF KPL + GK +IQR +E+ +A LD VATDDE+I +
Sbjct: 2 KFLGIIPARYASTRFPAKPLAMLGGKTVIQRVYEQ--VAGILDDAYVATDDERIEAAVKA 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG VIMTS + ++GT+RC EA K+ +D+VVNIQGDEP I+P +KA++A +
Sbjct: 60 FGGKVIMTSVNHKSGTDRCYEACTKIGGDFDVVVNIQGDEPFIQP----SQLKAVKACFE 115
Query: 169 AVFSTAVTSLKPEDAFDP-------NRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF-- 219
V + T +KP A D N K V++ + A+YFSR +IPY ++
Sbjct: 116 DVSTQIATLVKPFPADDELAVLENVNSPKVVLNKNMNALYFSRSVIPYQRNADKKDWLKN 175
Query: 220 -PYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDA 278
Y H+G+ +Y + LK L + L+L E LEQL+ LENGY +KV + E G+D
Sbjct: 176 HTYYKHIGLYAYRTEVLKEITSLPQSSLELAESLEQLRWLENGYTIKVGISEVETIGIDT 235
Query: 279 PEDVEKIESFMRERNL 294
P+D+E+ E F+++ NL
Sbjct: 236 PQDLEEAEKFLQKNNL 251
>gi|345893498|ref|ZP_08844295.1| hypothetical protein HMPREF1022_02955 [Desulfovibrio sp.
6_1_46AFAA]
gi|345046119|gb|EGW50012.1| hypothetical protein HMPREF1022_02955 [Desulfovibrio sp.
6_1_46AFAA]
Length = 440
Score = 183 bits (465), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 94/245 (38%), Positives = 148/245 (60%), Gaps = 4/245 (1%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ V +IPAR+AS+R GKPL++I GKP++Q WE A LD +VVATDD +IA+ ++
Sbjct: 2 KAVAVIPARYASTRLPGKPLLDICGKPLLQHVWEIVSRARGLDEVVVATDDARIADAVER 61
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG V MTS C++G++R E L D+ VNIQGDEPL+E I+ +
Sbjct: 62 FGGKVCMTSPECQSGSDRVREVAASLAA--DVYVNIQGDEPLLEASAIERLRDVFTEDAG 119
Query: 169 AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQ 228
+T + + E A P++VK + D+ G A+YFSR +P+ + + +F L H+GI
Sbjct: 120 VQVATLCSRISEEQARSPHQVKVIRDHAGNALYFSRAPLPFVRERGESTEF--LGHVGIY 177
Query: 229 SYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESF 288
+Y ++ L+ + L +PL+ E LEQL+ L+ G ++V++ GVD PED+E++ +
Sbjct: 178 AYRADVLRGFASLPFSPLEQAEKLEQLRFLQAGIAIRVLEAPPMGAGVDTPEDLERVRAV 237
Query: 289 MRERN 293
+RE+
Sbjct: 238 IREKE 242
>gi|56478319|ref|YP_159908.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Aromatoleum
aromaticum EbN1]
gi|81598625|sp|Q5P107.1|KDSB_AZOSE RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|56314362|emb|CAI09007.1| 3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38)
[Aromatoleum aromaticum EbN1]
Length = 258
Score = 183 bits (465), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 102/244 (41%), Positives = 146/244 (59%), Gaps = 10/244 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR ASSR GKPL +I GKPM+ R E+++ A + VATD ++ + + G D
Sbjct: 7 VIPARHASSRLPGKPLADIAGKPMVVRVLEQARRAGAAS-VWVATDHPEVLDAVRAAGGD 65
Query: 113 VIMTSESCRNGTERCNEALQKL-EKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
+MT E +GT+R E + L K DIVVN+QGDEPLIEP++I V +AL P A
Sbjct: 66 ALMTREDHPSGTDRLAEVVDALGWKADDIVVNVQGDEPLIEPKLIAAVAQALADDPVAAI 125
Query: 172 STAVTSLK-PEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSG------KVNPQFPYLLH 224
+TA L + F+PN VK V D H +A+YFSR IP+ + + P L H
Sbjct: 126 ATAAHPLHAAAELFNPNVVKVVCDAHDHALYFSRAPIPWARDAFATARDDIPAGLPVLRH 185
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVD-HEAHGVDAPEDVE 283
+G+ +Y FL+ Y L P+PL+ E LEQL+ L +G++++V+ V A GVD PED+E
Sbjct: 186 VGLYAYRVAFLRCYASLAPSPLEQWEALEQLRALWHGHRIRVMTVAVAPAAGVDTPEDLE 245
Query: 284 KIES 287
++ +
Sbjct: 246 RVRA 249
>gi|302346477|ref|YP_003814775.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Prevotella
melaninogenica ATCC 25845]
gi|302150493|gb|ADK96754.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Prevotella
melaninogenica ATCC 25845]
Length = 246
Score = 183 bits (465), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 95/245 (38%), Positives = 150/245 (61%), Gaps = 5/245 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR++SSRF GKPL + GK +I+ + ++++ ++ + VATDD++I + +
Sbjct: 2 KFIGIIPARYSSSRFPGKPLAILGGKAVIEHVYR--QVSSVMEDVFVATDDQRIYDAVEA 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG IMT ++GT+R EAL K+ +D+V+NIQGDEP I+ ++ V++
Sbjct: 60 FGGKAIMTRSDHQSGTDRICEALDKVGGDFDVVINIQGDEPFIQRSQLETVMQCFDNPRT 119
Query: 169 AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPY---NKSGKVNPQFPYLLHL 225
+ + E +PN K V+DN GYA+YFSR +IP+ +S + FP+L H+
Sbjct: 120 QIATLGKPFESMEAVENPNSPKIVLDNDGYALYFSRSVIPFVRGKESAEWLTHFPFLKHI 179
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKI 285
G+ +Y + L+ L +PL+L E LEQL+ L+NGYK+KV D E G+D PED++
Sbjct: 180 GLYAYRTKVLREVSRLPQSPLELAESLEQLRWLQNGYKIKVGLTDVETIGIDTPEDLQHA 239
Query: 286 ESFMR 290
E +R
Sbjct: 240 EEKLR 244
>gi|373458561|ref|ZP_09550328.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Caldithrix abyssi
DSM 13497]
gi|371720225|gb|EHO41996.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Caldithrix abyssi
DSM 13497]
Length = 251
Score = 183 bits (465), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 102/242 (42%), Positives = 146/242 (60%), Gaps = 7/242 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ V +IPARF SSRF GKPL IL KPMIQ +ER+ AT + ++VATDD +IA+ +
Sbjct: 2 KAVCVIPARFGSSRFPGKPLAKILDKPMIQWVYERASKATLFEKVLVATDDRRIADTVTR 61
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG V +T +GT+R AL + D+VVN+QGDEPLI+PE++D +V + P
Sbjct: 62 FGGAVCLTPSDVPSGTDRV--ALAVKDLDVDVVVNLQGDEPLIQPELLDELVSVFRTHPQ 119
Query: 169 AVFSTAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK----SGKVNPQFPYLL 223
+T + + ED +PN V+ V D +AIYFSR +IPY + + + F Y
Sbjct: 120 VQMATPIKRITDYEDLINPNLVRVVKDKDHFAIYFSRSVIPYLRDVPAQKEWHKNFDYYK 179
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVE 283
H+GI +Y FL L P L+ E LEQL+VLENG+K+ I+ D+ + VD PE++
Sbjct: 180 HVGIYAYRKEFLLKLTALPPGHLEQAEKLEQLRVLENGFKIYTIETDYNSVSVDTPEELN 239
Query: 284 KI 285
++
Sbjct: 240 QL 241
>gi|417320300|ref|ZP_12106846.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio
parahaemolyticus 10329]
gi|328473263|gb|EGF44111.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio
parahaemolyticus 10329]
Length = 251
Score = 183 bits (465), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 104/250 (41%), Positives = 153/250 (61%), Gaps = 15/250 (6%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR++SSR GKPL +I GKPM+Q +E++ A D +++ATDDE+++ +QFG
Sbjct: 6 VIPARYSSSRLPGKPLADIGGKPMVQWVYEQAMQAGA-DDVIIATDDERVSAAVEQFGGK 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS + +GTER E ++K+ D I+VN+QGDEPL+ P II V L AA +A
Sbjct: 65 VCMTSPNHESGTERLAEVVEKMAIPADHIIVNVQGDEPLVPPVIIRQVADNL-AASNAPM 123
Query: 172 STAVTSLKPED-AFDPNRVKCVVDNHGYAIYFSRGLIPYNKS-------GKVNPQFPYLL 223
+T ++ ED F+PN VK V D GYA+YFSR IP+++ VN P +
Sbjct: 124 ATLAVEIESEDEVFNPNAVKVVADERGYAMYFSRATIPWDRDNFAKQDKAIVN---PLMR 180
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDV 282
H+GI +Y + F+ Y P+ L+ E LEQL+VL G K+ V + + A GVD PED+
Sbjct: 181 HIGIYAYRAGFINTYVNWAPSALEQIECLEQLRVLWYGEKIHVAVAKEAPAAGVDTPEDL 240
Query: 283 EKIESFMRER 292
E + + + ++
Sbjct: 241 EAVRAIVAKK 250
>gi|196231280|ref|ZP_03130139.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Chthoniobacter
flavus Ellin428]
gi|196224616|gb|EDY19127.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Chthoniobacter
flavus Ellin428]
Length = 244
Score = 183 bits (465), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 102/242 (42%), Positives = 144/242 (59%), Gaps = 4/242 (1%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+V +IP+R+AS+R KPL I GKP++Q WER A +D ++VATDD +IAE
Sbjct: 3 KVAVVIPSRYASTRLPAKPLHPIAGKPLVQHVWERCARAKGIDKVIVATDDMRIAEAAFA 62
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FGA+V MTS+ R+GT+R E +KL K Y ++N+QGDEPL++P ++ + A+
Sbjct: 63 FGAEVAMTSDKHRSGTDRVAEVAKKL-KGYTHIINVQGDEPLVDPTVVSKLAAAMAKDRK 121
Query: 169 AVFSTAVTSLKPEDAF-DPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
T+ + P+D +PN VK V+D +YFSR LIPY ++ V PQF H GI
Sbjct: 122 IEMITSASIFTPDDDLTNPNMVKVVLDRESNGLYFSRSLIPYVRNDGVRPQF--YRHQGI 179
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
Y + FL + P L+ E LEQL+ LENG K++V+ H A VD PEDV +E
Sbjct: 180 YGYTTKFLLQFVKWKPGILEQAESLEQLRALENGAKIRVVLAKHAAVSVDTPEDVTAVER 239
Query: 288 FM 289
+
Sbjct: 240 IL 241
>gi|94502071|ref|ZP_01308575.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bermanella
marisrubri]
gi|94425782|gb|EAT10786.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Oceanobacter sp.
RED65]
Length = 255
Score = 183 bits (465), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 102/246 (41%), Positives = 146/246 (59%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ SSR GKPL+ + GK MIQ +ER+ L T + ++VATDD++I + + FGA
Sbjct: 7 VIPARYGSSRLPGKPLIKLKGKSMIQHVYERA-LDTGVADIIVATDDDRIKQEAESFGAQ 65
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V+MTS NGTER E +KL+ D IVVN+QGDEPLI +I+ K L DA
Sbjct: 66 VVMTSVDHENGTERIAEVARKLKWGDDEIVVNLQGDEPLIPKSLIEITAKGLMDHSDAGM 125
Query: 172 STAVTSLK-PEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS------GKVNPQFPYLLH 224
++ T L ED FDPN VK V+D+ G A+YFSR IP+++ + P H
Sbjct: 126 ASICTPLSDAEDGFDPNVVKVVLDSRGMAMYFSRAPIPWDRDLYAKSKDALTDAMPVYRH 185
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDH-EAHGVDAPEDVE 283
+G+ Y FL Y + + ++ E LEQL+ L +G K+ + +D HG+D P+DV
Sbjct: 186 IGMYGYRVGFLNQYTQMSSSQIEQVESLEQLRALYHGVKIHMSVIDEPPGHGIDTPDDVA 245
Query: 284 KIESFM 289
++ES +
Sbjct: 246 RVESLL 251
>gi|383755420|ref|YP_005434323.1| putative 3-deoxy-manno-octulosonate cytidylyltransferase
[Selenomonas ruminantium subsp. lactilytica TAM6421]
gi|381367472|dbj|BAL84300.1| putative 3-deoxy-manno-octulosonate cytidylyltransferase
[Selenomonas ruminantium subsp. lactilytica TAM6421]
Length = 242
Score = 183 bits (464), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 94/238 (39%), Positives = 140/238 (58%), Gaps = 6/238 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+V+ +IPAR+AS+R GKPL +I GKPM+ R ++R+ A + +VATDDE+I ++
Sbjct: 2 KVLCVIPARYASTRLPGKPLKDIAGKPMVCRVYDRASQAKLVSDTIVATDDERIVAAVEK 61
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
G +MT + GT+R E D+++N+QGDEPLIEP +ID + + +
Sbjct: 62 SGGKAMMTRKDHPTGTDRLAEVAAAF-PDVDLIINVQGDEPLIEPSLIDELAAVFETDSE 120
Query: 169 AVFSTAVTSLKPEDAFD-PNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+T T + + PN VK V D GYA+YFSR ++PY + N P H+GI
Sbjct: 121 LKMATVKTLMTDRAEIENPNNVKVVTDKEGYALYFSRSVLPYPR----NEGCPVYKHIGI 176
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKI 285
+Y +FL Y + TPL+ E LEQL+ LENGY++KV++ + GVD ED+ K+
Sbjct: 177 YAYKRDFLLQYAKMESTPLEQSESLEQLRALENGYRIKVVETAAKFVGVDTAEDLAKV 234
>gi|168011021|ref|XP_001758202.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690658|gb|EDQ77024.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 167
Score = 183 bits (464), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 98/200 (49%), Positives = 127/200 (63%), Gaps = 33/200 (16%)
Query: 54 IPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADV 113
IPAR+ S RFEG+PLV+I PMIQRTWE++K T+L +VVA DD +IA+ + FGADV
Sbjct: 1 IPARYKSPRFEGEPLVHISDIPMIQRTWEQAKQFTSLKAVVVAIDDGRIADFYRAFGADV 60
Query: 114 IMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFST 173
MTSE+C +GTERCNEAL+KL +YDIVVN+Q V+
Sbjct: 61 -MTSENCLSGTERCNEALEKLAAEYDIVVNVQ------------------------VYQC 95
Query: 174 AVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSN 233
DA N +K +VD G+A+YFSR LIP NK +NP FPY+ HLG+Q +++
Sbjct: 96 --------DASACNWIKNIVDKKGFALYFSRALIPSNKKETLNPVFPYMRHLGMQCHNAE 147
Query: 234 FLKIYPGLHPTPLQLEEDLE 253
FL+ Y + P+ LQLEEDLE
Sbjct: 148 FLRAYASMPPSSLQLEEDLE 167
>gi|359728681|ref|ZP_09267377.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Leptospira weilii
str. 2006001855]
Length = 246
Score = 183 bits (464), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 106/246 (43%), Positives = 140/246 (56%), Gaps = 7/246 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+++G+IPAR+ASSRF GKPL I K MI+ T+ + +T L LVVATDD +I +
Sbjct: 3 KILGVIPARYASSRFPGKPLAKIGDKTMIEWTYRNASRSTALSELVVATDDTRIHDVVLA 62
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG + +MT +GT+R E + +Y +VVNIQGDEP IEPE+IDGV + P+
Sbjct: 63 FGGNSVMTRADHISGTDRIIEVANRF-PEYSVVVNIQGDEPGIEPELIDGVASLKASHPE 121
Query: 169 AVFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
STA L DPNRVK ++D +G AIYFSR LIP + P HLGI
Sbjct: 122 WEMSTAAVPLIDFSHGEDPNRVKVIIDRNGKAIYFSRSLIP----SQFKRVVPLYRHLGI 177
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVE-KIE 286
YD +FL Y L + L+ E LEQL+ +E GY + V VD P D+E IE
Sbjct: 178 YGYDRDFLLKYNSLPKSNLEESESLEQLRAIEAGYGIGVYLSREAGLSVDTPADLEIVIE 237
Query: 287 SFMRER 292
F + +
Sbjct: 238 DFKKRK 243
>gi|350530780|ref|ZP_08909721.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio
rotiferianus DAT722]
Length = 252
Score = 183 bits (464), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 103/243 (42%), Positives = 145/243 (59%), Gaps = 7/243 (2%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ASSR GKPL +I GKPMIQ +E++ A D +++ATDDE+++ +QFG
Sbjct: 6 VIPARYASSRLPGKPLADIGGKPMIQWVYEQALQAGAED-VIIATDDERVSVAVEQFGGK 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS + +GTER E ++K+ D IVVN+QGDEPLI P II V L +
Sbjct: 65 VCMTSPNHESGTERLAEVVEKMAIPADHIVVNVQGDEPLIPPSIIRQVADNLAGCDAPMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ----FPYLLHLGI 227
+ AV E+ F+PN VK V D GYA+YFSR IP+++ P + H+GI
Sbjct: 125 TLAVEIESEEEVFNPNAVKVVADERGYAMYFSRATIPWDRDNFAKQDKTIANPLMRHIGI 184
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKIE 286
+Y + F+ Y P+ L+ E LEQL+VL G K+ V + + A GVD PED+E +
Sbjct: 185 YAYRAGFINTYVNWQPSALEQIECLEQLRVLWYGEKIHVEVAKEAPAAGVDTPEDLEAVR 244
Query: 287 SFM 289
+ +
Sbjct: 245 AIV 247
>gi|417850803|ref|ZP_12496630.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pasteurella
multocida subsp. gallicida str. Anand1_poultry]
gi|338220340|gb|EGP05874.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pasteurella
multocida subsp. gallicida str. Anand1_poultry]
Length = 258
Score = 183 bits (464), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 105/251 (41%), Positives = 152/251 (60%), Gaps = 15/251 (5%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR+AS+R GKPL I GKPMI +E++ + + ++VATD E++A ++FGA+
Sbjct: 7 IIPARYASTRLPGKPLAEIAGKPMIAHVFEKA-MQSGAKRVIVATDHEQVATVARRFGAE 65
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTSE+ ++GTER E ++KL D I+VNIQGDEPLI P I+ V + L +
Sbjct: 66 VCMTSETHQSGTERLAEVVEKLGIAEDEIIVNIQGDEPLIPPAIVRQVAENLAKYQVKMA 125
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS------------GKVNPQF 219
S AV PE+ F+PN VK + D+ GY +YFSR IP+++ G++
Sbjct: 126 SLAVNITDPEELFNPNAVKVLTDHAGYVLYFSRAPIPWHRDQFASLPKEKSTRGQLVLSD 185
Query: 220 PYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDA 278
YL H+GI +Y + F+K Y P+ L+ E+LEQL+VL G K+ V + + GVD
Sbjct: 186 HYLRHIGIYAYRAGFIKQYIQWQPSALEQIENLEQLRVLWYGEKIHVELAREVPPVGVDT 245
Query: 279 PEDVEKIESFM 289
ED+EK+ S +
Sbjct: 246 AEDLEKVRSIL 256
>gi|29346155|ref|NP_809658.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bacteroides
thetaiotaomicron VPI-5482]
gi|298385519|ref|ZP_06995077.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Bacteroides sp.
1_1_14]
gi|383122420|ref|ZP_09943113.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bacteroides sp.
1_1_6]
gi|81587108|sp|Q8A9S0.1|KDSB_BACTN RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|29338050|gb|AAO75852.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bacteroides
thetaiotaomicron VPI-5482]
gi|251842489|gb|EES70569.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bacteroides sp.
1_1_6]
gi|298261660|gb|EFI04526.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Bacteroides sp.
1_1_14]
Length = 250
Score = 183 bits (464), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 102/252 (40%), Positives = 150/252 (59%), Gaps = 10/252 (3%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR+AS+RF KPL + GK +IQR +E ++A LD VATDDE+I +
Sbjct: 2 KFLGIIPARYASTRFPAKPLAMLGGKTVIQRVYE--QVAGILDDAYVATDDERIEAAVKA 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG V+MTS ++GT+RC EA K+ +D+VVNIQGDEP I+P ++ VKA P
Sbjct: 60 FGGKVVMTSIDHKSGTDRCYEACTKIGGDFDVVVNIQGDEPFIQPSQLNA-VKACFEDPT 118
Query: 169 AVFSTAVTSLKPEDAF----DPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF---PY 221
+T V ++ F + N K V++ + A+YFSR +IP+ ++ Y
Sbjct: 119 TQIATLVKPFTADEPFAVLENVNSPKVVLNKNWNALYFSRSIIPFQRNADKEDWLKGHTY 178
Query: 222 LLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPED 281
H+G+ +Y + LK L + L+L E LEQL+ LENGYK+KV D E G+D P+D
Sbjct: 179 YKHIGLYAYRTEVLKEITALPQSSLELAESLEQLRWLENGYKIKVGISDVETIGIDTPQD 238
Query: 282 VEKIESFMRERN 293
++ E F++ R+
Sbjct: 239 LKHAEEFLKNRS 250
>gi|449144378|ref|ZP_21775193.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio mimicus
CAIM 602]
gi|449079879|gb|EMB50798.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio mimicus
CAIM 602]
Length = 251
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 106/248 (42%), Positives = 152/248 (61%), Gaps = 11/248 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ S+R GKPL +I GKPMIQ +E++ A D +++ATDD+++ + Q FG
Sbjct: 6 VIPARYQSTRLPGKPLADIGGKPMIQWVYEQAMQAGA-DRVIIATDDQRVEQAVQAFGGV 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS ++GTER E ++K+ D IVVN+QGDEPLI P II V L A +
Sbjct: 65 VCMTSPDHQSGTERLAEVVEKMAIPADHIVVNVQGDEPLIPPAIIRQVADNLAACSAPMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS--GKVNPQF--PYLLHLGI 227
+ AV + F+PN VK + D +GYA+YFSR IP+++ KV+ P L H+GI
Sbjct: 125 TLAVEIEDEAEVFNPNAVKVITDKNGYALYFSRATIPWDRDNFAKVDKSIAQPLLRHIGI 184
Query: 228 QSYDSNFLKIYPGLHPTPLQLE--EDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
+Y + F+ Y LH P QLE E LEQL+VL +G K+ V + ++ GVD PED+E
Sbjct: 185 YAYRAGFINTY--LHWQPSQLEKIECLEQLRVLWHGEKIHVAVALEAPPAGVDTPEDLEV 242
Query: 285 IESFMRER 292
+ F+ ++
Sbjct: 243 VRQFIAKQ 250
>gi|384424870|ref|YP_005634228.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio cholerae
LMA3984-4]
gi|327484423|gb|AEA78830.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio cholerae
LMA3984-4]
Length = 252
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 105/247 (42%), Positives = 149/247 (60%), Gaps = 9/247 (3%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ S+R GKPL +I GKPMIQ +E++ A D +++ATDDE++ + Q FG
Sbjct: 6 VIPARYQSTRLPGKPLADIGGKPMIQWVYEQAMQAGA-DRVIIATDDERVEQAVQAFGGV 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS + ++GTER E + K+ D IVVN+QGDEPLI P II V L A +
Sbjct: 65 VCMTSPNHQSGTERLAEVVAKMAIPADHIVVNVQGDEPLIPPAIIRQVADNLAACSAPMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYN-----KSGKVNPQFPYLLHLG 226
+ AV + F+PN VK + D +GYA+YFSR IP++ K+ K Q P L H+G
Sbjct: 125 TLAVEIEDKAEVFNPNAVKVITDKNGYALYFSRATIPWDRDNFAKADKAIVQ-PLLRHIG 183
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKI 285
I +Y + F+ Y P+ L+ E LEQL+VL +G K+ V + ++ GVD PED+E +
Sbjct: 184 IYAYRAGFINTYLDWQPSQLEKIECLEQLRVLWHGEKIHVAVALEAPPAGVDTPEDLEVV 243
Query: 286 ESFMRER 292
+ ER
Sbjct: 244 RRIVAER 250
>gi|255532476|ref|YP_003092848.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pedobacter
heparinus DSM 2366]
gi|255345460|gb|ACU04786.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pedobacter
heparinus DSM 2366]
Length = 242
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 100/241 (41%), Positives = 147/241 (60%), Gaps = 6/241 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+V+GIIPAR+AS+RF GKPL+ I GK MIQR +E++ A +L +VVATDDE+IAE
Sbjct: 2 KVLGIIPARYASTRFPGKPLIEIQGKSMIQRVYEQALKAISLTKVVVATDDERIAEAINN 61
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FGA+ +MT + ++GT+RC E Q +DIV+NIQGDEP I P+ ID +V + +
Sbjct: 62 FGAEFVMTRDDHQSGTDRCAEVSQHF-PDFDIVINIQGDEPFINPKQIDLLVSCFEHG-N 119
Query: 169 AVFSTAVTSLKPEDA-FDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF---PYLLH 224
+T + + E+ + N K V+++ AIYFSR IPY ++ + N + H
Sbjct: 120 VKLATLIKEIHTEEELLNTNIPKVVINSRQEAIYFSRHTIPYIRNAEKNKWLDVHQFYKH 179
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEK 284
+GI Y + L L P+ L++ E LEQL+ +ENGY ++ E +D PED++K
Sbjct: 180 IGIYGYTTPTLLEITRLQPSSLEMAESLEQLRWVENGYTIQTRITAIETIAIDTPEDLDK 239
Query: 285 I 285
I
Sbjct: 240 I 240
>gi|229515255|ref|ZP_04404715.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio cholerae
TMA 21]
gi|229347960|gb|EEO12919.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio cholerae
TMA 21]
Length = 252
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 105/247 (42%), Positives = 149/247 (60%), Gaps = 9/247 (3%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ S+R GKPL +I GKPMIQ +E++ A D +++ATDDE++ + Q FG
Sbjct: 6 VIPARYQSTRLPGKPLADIGGKPMIQWVYEQAMQAGA-DRVIIATDDERVEQAVQAFGGV 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS + ++GTER E + K+ D IVVN+QGDEPLI P II V L A +
Sbjct: 65 VCMTSPNHQSGTERLAEVVAKMAIPADHIVVNVQGDEPLIPPAIIRQVADNLAACSAPMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYN-----KSGKVNPQFPYLLHLG 226
+ AV + F+PN VK + D +GYA+YFSR IP++ K+ K Q P L H+G
Sbjct: 125 TLAVEIEDETEVFNPNAVKVITDKNGYALYFSRATIPWDRDNFAKTDKAIVQ-PLLRHIG 183
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKI 285
I +Y + F+ Y P+ L+ E LEQL+VL +G K+ V + ++ GVD PED+E +
Sbjct: 184 IYAYRAGFINTYLDWQPSQLEKIECLEQLRVLWHGEKIHVAVALEAPPAGVDTPEDLEVV 243
Query: 286 ESFMRER 292
+ ER
Sbjct: 244 RRIVAER 250
>gi|383453056|ref|YP_005367045.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Corallococcus
coralloides DSM 2259]
gi|380733163|gb|AFE09165.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Corallococcus
coralloides DSM 2259]
Length = 248
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 98/247 (39%), Positives = 140/247 (56%), Gaps = 8/247 (3%)
Query: 48 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQ 107
SR V +IPAR AS+RF GKPL I G+PMI+ W R + A D + VATDD +I + +
Sbjct: 4 SRTVAVIPARHASTRFPGKPLALIAGRPMIEHVWRRCQEARAFDEVWVATDDTRIRDVVE 63
Query: 108 QFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
FG +MTS +C GT+R E + + ++ VN+QGDEPL++P + + Q
Sbjct: 64 GFGGKAVMTSPTCPTGTDRIAE-VARARPDVEVWVNVQGDEPLVDPAALKVLADLFQDE- 121
Query: 168 DAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPY--LLHL 225
T V L+ E+ +PN VK V+ +G A+YFSR +P+ + +P P HL
Sbjct: 122 SVHMGTLVRPLETEEVDNPNVVKAVLALNGDALYFSRAAVPHAR----DPGTPVRRWAHL 177
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKI 285
G+ Y + L PTPL+ E LEQL+ LENG +++ V+ VD PEDV ++
Sbjct: 178 GLYGYRRDTLLQLASFSPTPLEETEKLEQLRALENGLRIRCASVNWRTVAVDVPEDVARV 237
Query: 286 ESFMRER 292
E+ MRER
Sbjct: 238 EAVMRER 244
>gi|153213057|ref|ZP_01948595.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio cholerae
1587]
gi|229520335|ref|ZP_04409761.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio cholerae TM
11079-80]
gi|229523894|ref|ZP_04413299.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio cholerae
bv. albensis VL426]
gi|229529102|ref|ZP_04418492.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio cholerae
12129(1)]
gi|254226043|ref|ZP_04919642.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio cholerae
V51]
gi|254286768|ref|ZP_04961722.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio cholerae
AM-19226]
gi|419837598|ref|ZP_14361036.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-46B1]
gi|421344043|ref|ZP_15794446.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-43B1]
gi|421354541|ref|ZP_15804873.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HE-45]
gi|423735549|ref|ZP_17708746.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-41B1]
gi|424009890|ref|ZP_17752827.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-44C1]
gi|429886143|ref|ZP_19367709.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio cholerae
PS15]
gi|124116104|gb|EAY34924.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio cholerae
1587]
gi|125621426|gb|EAZ49761.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio cholerae
V51]
gi|150423195|gb|EDN15142.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio cholerae
AM-19226]
gi|229332876|gb|EEN98362.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio cholerae
12129(1)]
gi|229337475|gb|EEO02492.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio cholerae
bv. albensis VL426]
gi|229342701|gb|EEO07693.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio cholerae TM
11079-80]
gi|395940123|gb|EJH50804.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-43B1]
gi|395953666|gb|EJH64279.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HE-45]
gi|408629732|gb|EKL02401.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-41B1]
gi|408856146|gb|EKL95841.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-46B1]
gi|408863685|gb|EKM03159.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-44C1]
gi|429227037|gb|EKY33094.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio cholerae
PS15]
Length = 252
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 105/247 (42%), Positives = 149/247 (60%), Gaps = 9/247 (3%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ S+R GKPL +I GKPMIQ +E++ A D +++ATDDE++ + Q FG
Sbjct: 6 VIPARYQSTRLPGKPLADIGGKPMIQWVYEQAMQAGA-DRVIIATDDERVEQAVQAFGGV 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS + ++GTER E + K+ D IVVN+QGDEPLI P II V L A +
Sbjct: 65 VCMTSPNHQSGTERLAEVVAKMAIPADHIVVNVQGDEPLIPPAIIRQVADNLAACSAPMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYN-----KSGKVNPQFPYLLHLG 226
+ AV + F+PN VK + D +GYA+YFSR IP++ K+ K Q P L H+G
Sbjct: 125 TLAVEIEDEAEVFNPNAVKVITDKNGYALYFSRATIPWDRDNFAKADKAIVQ-PLLRHIG 183
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKI 285
I +Y + F+ Y P+ L+ E LEQL+VL +G K+ V + ++ GVD PED+E +
Sbjct: 184 IYAYRAGFINTYLDWQPSQLEKIECLEQLRVLWHGEKIHVAVALEAPPAGVDTPEDLEVV 243
Query: 286 ESFMRER 292
+ ER
Sbjct: 244 RRIVAER 250
>gi|422307815|ref|ZP_16394970.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
CP1035(8)]
gi|408619019|gb|EKK92066.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
CP1035(8)]
Length = 257
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 105/247 (42%), Positives = 149/247 (60%), Gaps = 9/247 (3%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ S+R GKPL +I GKPMIQ +E++ A D +++ATDDE++ + Q FG
Sbjct: 6 VIPARYQSTRLPGKPLADIGGKPMIQWVYEQAMQAGA-DRVIIATDDERVEQAVQAFGGV 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS + ++GTER E + K+ D IVVN+QGDEPLI P II V L A +
Sbjct: 65 VCMTSLNHQSGTERLAEVVAKMAIPADHIVVNVQGDEPLIPPAIIRQVADNLAACSAPMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYN-----KSGKVNPQFPYLLHLG 226
+ AV + F+PN VK + D +GYA+YFSR IP++ K+ K Q P L H+G
Sbjct: 125 TLAVEIEDEAEVFNPNAVKVITDKNGYALYFSRATIPWDRDNFAKADKAIVQ-PLLRHIG 183
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKI 285
I +Y + F+ Y P+ L+ E LEQL+VL +G K+ V + ++ GVD PED+E +
Sbjct: 184 IYAYRAGFINTYLDWQPSKLEKIECLEQLRVLWHGEKIHVAVALEAPPAGVDTPEDLEVV 243
Query: 286 ESFMRER 292
+ ER
Sbjct: 244 RRIVAER 250
>gi|183179501|ref|ZP_02957712.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio cholerae
MZO-3]
gi|183012912|gb|EDT88212.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio cholerae
MZO-3]
Length = 252
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 105/247 (42%), Positives = 149/247 (60%), Gaps = 9/247 (3%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ S+R GKPL +I GKPMIQ +E++ A D +++ATDDE++ + Q FG
Sbjct: 6 VIPARYQSTRLPGKPLADIGGKPMIQWVYEQAMQAGA-DRVIIATDDERVEQAVQAFGGV 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS + ++GTER E + K+ D IVVN+QGDEPLI P II V L A +
Sbjct: 65 VCMTSPNHQSGTERLAEVVAKMAIPADHIVVNVQGDEPLIPPAIIRQVADNLAACSAPMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYN-----KSGKVNPQFPYLLHLG 226
+ AV + F+PN VK + D +GYA+YFSR IP++ K+ K Q P L H+G
Sbjct: 125 TLAVEIEDETEVFNPNAVKVITDKNGYALYFSRATIPWDRDNFAKADKAIVQ-PLLRHIG 183
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKI 285
I +Y + F+ Y P+ L+ E LEQL+VL +G K+ V + ++ GVD PED+E +
Sbjct: 184 IYAYRAGFINTYLDWQPSQLEKIECLEQLRVLWHGEKIHVAVALEAPPAGVDTPEDLEVV 243
Query: 286 ESFMRER 292
+ ER
Sbjct: 244 RRIVAER 250
>gi|404485058|ref|ZP_11020262.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Barnesiella
intestinihominis YIT 11860]
gi|404340063|gb|EJZ66494.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Barnesiella
intestinihominis YIT 11860]
Length = 246
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 96/250 (38%), Positives = 155/250 (62%), Gaps = 14/250 (5%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR+AS+RF GKPL ++ GK MIQR +E+ + LD++ VATDD++I +
Sbjct: 2 KFIGIIPARYASTRFPGKPLADMKGKYMIQRVYEQVR--KILDNVCVATDDDRIFNAVES 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG +V+MTS R+GT+RC EA +L D+++NIQGDEP I+PE I+ ++ +P
Sbjct: 60 FGGNVVMTSAEHRSGTDRCFEAYNRLGGNEDVIINIQGDEPFIKPEQIESLIACFD-SPQ 118
Query: 169 AVFSTAVTSLKPEDAF----DPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNP-QFP--- 220
+T V + + + +PN K ++++ A+YFSR +IPY ++ ++P Q+P
Sbjct: 119 TQIATLVRPFEATEGYEALANPNSPKVILNDKNEALYFSRSIIPYMRN--ISPEQWPDKH 176
Query: 221 -YLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAP 279
Y H+G+ Y ++ L L + L++ E LEQL+ L+NGY +KV E G+D P
Sbjct: 177 VYYKHIGMYGYRADILSQITRLPQSSLEIAESLEQLRWLQNGYTIKVGITTQETIGIDTP 236
Query: 280 EDVEKIESFM 289
+D++K + +
Sbjct: 237 DDLQKALTLL 246
>gi|153835240|ref|ZP_01987907.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio harveyi
HY01]
gi|148868278|gb|EDL67412.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio harveyi
HY01]
Length = 252
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 102/243 (41%), Positives = 145/243 (59%), Gaps = 7/243 (2%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR++SSR GKPL +I GKPMIQ +E++ A D +++ATDDE+++ +QFG
Sbjct: 6 VIPARYSSSRLPGKPLADIGGKPMIQWVYEQALQAGAED-VIIATDDERVSAAAEQFGGK 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS + +GTER E ++K+ D IVVN+QGDEPLI P II V L +
Sbjct: 65 VCMTSPNHESGTERLAEVVEKMAIPADHIVVNVQGDEPLIPPSIIRQVADNLAGCDAPMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ----FPYLLHLGI 227
+ AV E+ F+PN VK V D GYA+YFSR IP+++ P + H+GI
Sbjct: 125 TLAVEIESEEEVFNPNAVKVVTDERGYAMYFSRATIPWDRDNFAKQDKTIANPLMRHIGI 184
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKIE 286
+Y + F+ Y P+ L+ E LEQL+VL G K+ V + + A GVD PED+E +
Sbjct: 185 YAYRAGFINTYVNWQPSALEQIECLEQLRVLWYGEKIHVEVAKEAPAAGVDTPEDLEAVR 244
Query: 287 SFM 289
+ +
Sbjct: 245 AIV 247
>gi|301063788|ref|ZP_07204289.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [delta
proteobacterium NaphS2]
gi|300442107|gb|EFK06371.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [delta
proteobacterium NaphS2]
Length = 254
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 98/242 (40%), Positives = 145/242 (59%), Gaps = 4/242 (1%)
Query: 50 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQF 109
+ IPAR+ SSRF GKPL I GKPMIQ T+ER+ + L + VATDD++I C + F
Sbjct: 3 IYAFIPARYQSSRFPGKPLAIIAGKPMIQHTYERALACSELSAVYVATDDQRIKACVEGF 62
Query: 110 GADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
G + +MT + +GT+R EA +K+ K D+VVNIQGD+P+ +PE++ +++ L A
Sbjct: 63 GGNALMTRSAHVSGTDRIAEAARKIGVKDRDLVVNIQGDQPVFQPEVVSAMIQPLMADAS 122
Query: 169 AVFSTAVTSLKPE-DAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
T ++ E D +PN VK V DN G+A+YFSR IP+ + +P + HLG
Sbjct: 123 IPMGTLKCRIRDEADITNPNHVKVVTDNRGFALYFSRCPIPFCRDE--SPGQVHFKHLGF 180
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
+ +FL + L L+ E LEQL+ LENGY + V + +++ VD P DV IE+
Sbjct: 181 YCFRMDFLLKFTALAEGTLESLEKLEQLRALENGYHISVAESVYDSIEVDVPADVGAIEA 240
Query: 288 FM 289
++
Sbjct: 241 YL 242
>gi|160890291|ref|ZP_02071294.1| hypothetical protein BACUNI_02732 [Bacteroides uniformis ATCC 8492]
gi|270296868|ref|ZP_06203067.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Bacteroides sp.
D20]
gi|317479156|ref|ZP_07938295.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Bacteroides sp.
4_1_36]
gi|423306765|ref|ZP_17284764.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bacteroides
uniformis CL03T00C23]
gi|423308647|ref|ZP_17286637.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bacteroides
uniformis CL03T12C37]
gi|156860023|gb|EDO53454.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Bacteroides
uniformis ATCC 8492]
gi|270272855|gb|EFA18718.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Bacteroides sp.
D20]
gi|316904686|gb|EFV26501.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Bacteroides sp.
4_1_36]
gi|392678139|gb|EIY71548.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bacteroides
uniformis CL03T00C23]
gi|392686752|gb|EIY80053.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bacteroides
uniformis CL03T12C37]
Length = 251
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 101/253 (39%), Positives = 147/253 (58%), Gaps = 10/253 (3%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR+AS+RF KPL + GK +IQR +E ++A LD VATDDE+I +
Sbjct: 2 KFLGIIPARYASTRFPAKPLAVLGGKTVIQRVYE--QVAGILDDAYVATDDERIEAAVKA 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG V+MTS ++GT+RC EA K+ ++D+VVNIQGDEP I+P + VKA P
Sbjct: 60 FGGKVVMTSTEHKSGTDRCQEACTKIGGQFDVVVNIQGDEPFIQPSQLQA-VKACFDDPA 118
Query: 169 AVFSTAVTSLKPEDAFDP----NRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF---PY 221
+T V ++ F+ N K V++ + A+YFSR +IPY ++ Y
Sbjct: 119 TQIATLVKPFTVDNGFEALENVNSPKVVLNKNRNALYFSRSIIPYQRNAAKEDWLENHTY 178
Query: 222 LLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPED 281
H+G+ +Y LK L + L++ E LEQL+ LENGY +K D E G+D P+D
Sbjct: 179 YKHIGLYAYRVEVLKEITALPQSSLEIAESLEQLRWLENGYTIKAGITDVETIGIDTPQD 238
Query: 282 VEKIESFMRERNL 294
+E+ E F++ L
Sbjct: 239 LERAEEFLKSHGL 251
>gi|444918130|ref|ZP_21238209.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Cystobacter fuscus
DSM 2262]
gi|444710244|gb|ELW51231.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Cystobacter fuscus
DSM 2262]
Length = 246
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 95/242 (39%), Positives = 139/242 (57%), Gaps = 2/242 (0%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
R V +IPAR+AS+RF GKPL +I G+PMI+ W R + A ++VATDD +I E +
Sbjct: 5 RPVAVIPARYASTRFPGKPLASIAGRPMIEHVWRRCQEALVFGEVLVATDDVRIQEAVEG 64
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG +MTS C GT+R E + + D+ VN+QGDEPL++P+ + V+ L A P
Sbjct: 65 FGGTAVMTSPECATGTDRVAE-VARTRADVDVWVNVQGDEPLVDPDTLR-VLAGLFADPA 122
Query: 169 AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQ 228
T V L+ + P+ VK V+ +G A+YFSR L+P+ + + HLG+
Sbjct: 123 VEMGTLVRPLEAAEQASPHVVKAVLALNGDALYFSRALLPFVREPGEAGAVRHWAHLGLY 182
Query: 229 SYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESF 288
Y L GL PTPL+ E LEQL+ LE+G +++ +V VD P DV ++E+
Sbjct: 183 GYRRATLLRLAGLSPTPLEGAEKLEQLRALEHGVRIRCGQVAGHTVAVDVPGDVARVEAV 242
Query: 289 MR 290
+R
Sbjct: 243 LR 244
>gi|404405408|ref|ZP_10996992.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Alistipes sp.
JC136]
Length = 248
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 101/248 (40%), Positives = 148/248 (59%), Gaps = 10/248 (4%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ + IIPAR+AS+RF GKPL + GKP+I+R +E ++A LD VVATDDE+I + +
Sbjct: 2 KFIAIIPARYASTRFPGKPLAMLGGKPVIERVYE--QVAGVLDDAVVATDDERIYDAVRA 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG V MTS R+GT+RC EA +L +YD+VVN+QGDEP I+ ++ V + P
Sbjct: 60 FGGRVEMTSPDHRSGTDRCREAYDRLGAEYDVVVNVQGDEPFIQASQLETVKRCFD-DPA 118
Query: 169 AVFSTAVTSLKPEDAF----DPNRVKCVVDNHGYAIYFSRGLIPYNKS---GKVNPQFPY 221
+T V D +PN K V+D AIYFSR +IPY + + + +
Sbjct: 119 TDIATLVKPFTEADGLAALENPNSPKVVLDAQSRAIYFSRSVIPYLRGVPREEWLARHTF 178
Query: 222 LLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPED 281
H+G+ ++ ++ L+ L + L+ E LEQL+ LENGYK+ V + E G+D PED
Sbjct: 179 YKHIGLYAFRADVLRAVTALPQSTLEKAESLEQLRWLENGYKIGVGISEVETIGIDTPED 238
Query: 282 VEKIESFM 289
+EK E+F+
Sbjct: 239 LEKAEAFL 246
>gi|395225443|ref|ZP_10403966.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Thiovulum sp.
ES]
gi|394446378|gb|EJF07207.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Thiovulum sp.
ES]
Length = 238
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 93/237 (39%), Positives = 145/237 (61%), Gaps = 6/237 (2%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR SSR K L++I GK +IQR +E+ K + ++VATD +++A+ + FG +
Sbjct: 6 IIPARLQSSRLPRKVLLDICGKSLIQRVYEKVKESKKAQRIIVATDSDEVAKVVENFGGE 65
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFS 172
V MTS+ ++GT+R E Q L+ D VVN+QGDEPLI P++ID +++ + +F
Sbjct: 66 VFMTSDQHKSGTDRVAEVTQNLD--VDFVVNVQGDEPLISPDLIDKIIEMFENDKSVLFG 123
Query: 173 TAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDS 232
TA + E+A D + VK V D IYFSR IP+++ G Y H+GI Y
Sbjct: 124 TAKHKISEEEANDSHIVKVVTDVEENGIYFSRSRIPFHRDGG----HEYFQHIGIYGYKK 179
Query: 233 NFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFM 289
FL+I+ L L+ E LEQL+ +ENG+K++V++ ++++ GVD D+EK++ +
Sbjct: 180 EFLEIFTKLPHGKLEDMEKLEQLRAIENGFKIRVVETEYKSIGVDTEADLEKVKRII 236
>gi|392551475|ref|ZP_10298612.1| CTP:CMP-3-deoxy-D-manno-octulosonate transferase [Pseudoalteromonas
spongiae UST010723-006]
Length = 251
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 109/250 (43%), Positives = 152/250 (60%), Gaps = 15/250 (6%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPAR+ASSR KPL +I GKPM+Q +E++ LA+ ++VATD +I ++F
Sbjct: 4 VVIIPARYASSRLPAKPLADIQGKPMVQHVYEKA-LASGAKRVIVATDHIEIEAAVKRFN 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKAL--QAAP 167
+V+MT E +GTER E + KL D IVVN+QGDEPLI P+ I V L +AP
Sbjct: 63 GEVLMTREDHESGTERLAEVVTKLNLPDDTIVVNVQGDEPLIPPKNIAQVASLLASDSAP 122
Query: 168 DAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNP-------QFP 220
A S A+ + E+A +PN VK V DNH A+YFSR IPY+++ + F
Sbjct: 123 MATLSVAIDDI--EEALNPNAVKVVADNHNNALYFSRATIPYDRNRFLGKDEISEIGDF- 179
Query: 221 YLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAP 279
Y H+GI +Y + F+K Y L +PL+ E LEQL+VL +G K+KV ++ GVD P
Sbjct: 180 YQRHIGIYAYRAGFIKEYITLDVSPLEQIESLEQLRVLYHGKKIKVQTAIESPQPGVDTP 239
Query: 280 EDVEKIESFM 289
ED+ K+ +F+
Sbjct: 240 EDLAKVNAFL 249
>gi|332283943|ref|YP_004415854.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pusillimonas sp.
T7-7]
gi|330427896|gb|AEC19230.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pusillimonas sp.
T7-7]
Length = 254
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/253 (42%), Positives = 144/253 (56%), Gaps = 14/253 (5%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
+ +IPAR AS+R GKPL++I GKPM+ RT E++ + +VVATDD I Q G
Sbjct: 4 IAVIPARAASTRLPGKPLLDICGKPMVVRTAEQAA-QSQASRVVVATDDNHIQAAVQAHG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
D I+T GT+R E +L D IVVN+QGDEPLI+P I+ V + L PDA
Sbjct: 63 FDAILTRADHPTGTDRLAEVALQLGLAPDSIVVNVQGDEPLIDPVQINTVAQLLAQTPDA 122
Query: 170 VFSTAVTSLKPEDA---FDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVN------PQFP 220
+T T++ DA F+PN VK V A+YFSR IP+ ++ + P
Sbjct: 123 AIATCATTIT--DAATLFNPNAVKVVCTLGQRALYFSRAPIPWARNALADGSQILAPGLS 180
Query: 221 YLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAP 279
L H+G+ +Y S+FLK YPGL PL+ E LEQL+ LENGY + V I H A GVD
Sbjct: 181 ALHHIGLYAYRSDFLKAYPGLPVGPLESFESLEQLRALENGYSIAVHIAAAHPAAGVDTQ 240
Query: 280 EDVEKIESFMRER 292
ED+++I R
Sbjct: 241 EDLDRIREIFTNR 253
>gi|258626804|ref|ZP_05721611.1| 3-deoxy-manno-octulosonate cytidylyltransferase synthetase [Vibrio
mimicus VM603]
gi|258580851|gb|EEW05793.1| 3-deoxy-manno-octulosonate cytidylyltransferase synthetase [Vibrio
mimicus VM603]
Length = 251
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 106/248 (42%), Positives = 152/248 (61%), Gaps = 11/248 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ S+R GKPL +I GKPMIQ +E++ A D +++ATDD+++ + Q FG
Sbjct: 6 VIPARYQSTRLPGKPLADIGGKPMIQWVYEQAMQAGA-DRVIIATDDQRVEQAVQAFGGV 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS ++GTER E ++K+ D IVVN+QGDEPLI P II V L A +
Sbjct: 65 VCMTSPDHQSGTERLAEVVEKMAIPADHIVVNVQGDEPLIPPVIIRQVADNLAACSAPMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS--GKVNPQF--PYLLHLGI 227
+ AV + F+PN VK + D +GYA+YFSR IP+++ KV+ P L H+GI
Sbjct: 125 TLAVEIEDEAEVFNPNAVKVITDKNGYALYFSRATIPWDRDNFAKVDKSIAQPLLRHIGI 184
Query: 228 QSYDSNFLKIYPGLHPTPLQLE--EDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
+Y + F+ Y LH P QLE E LEQL+VL +G K+ V + ++ GVD PED+E
Sbjct: 185 YAYRAGFINTY--LHWQPSQLEKIECLEQLRVLWHGEKIHVAVALEAPPAGVDTPEDLEV 242
Query: 285 IESFMRER 292
+ F+ ++
Sbjct: 243 VRQFIAKQ 250
>gi|239815620|ref|YP_002944530.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Variovorax
paradoxus S110]
gi|259494420|sp|C5CKW0.1|KDSB_VARPS RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|239802197|gb|ACS19264.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Variovorax
paradoxus S110]
Length = 257
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 100/248 (40%), Positives = 145/248 (58%), Gaps = 13/248 (5%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
++PAR AS+R KPL +I G PM+ R R+ + +VVA DD I E C + G +
Sbjct: 6 LVPARLASTRLPNKPLADIAGLPMVVRVARRASQSGAA-RVVVAGDDAAIVEACARHGVE 64
Query: 113 VIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
I+T + +G++R EA ++L DI+VN+QGDEPLI+P +ID V AL A P+A
Sbjct: 65 AILTRQDHPSGSDRLAEACEQLGLDGSDIIVNVQGDEPLIDPALIDAVASALAAHPEAAM 124
Query: 172 STAVTSLKPEDAF-DPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLL------- 223
STA + D F +PN VK V+D G A+YFSR IP+ + G N P +L
Sbjct: 125 STAAHEIDSLDDFLNPNVVKAVLDAQGNALYFSRAPIPWWRDGSANGAPPSVLPAPAPLR 184
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEA--HGVDAPED 281
H+GI Y + F++ +P L P P++ E LEQL+ L +G+++ V V H A GVD P D
Sbjct: 185 HIGIYGYRAGFVRSFPSLAPAPVEATEALEQLRALWHGHRIAV-HVSHVAPGPGVDTPAD 243
Query: 282 VEKIESFM 289
+E++ +
Sbjct: 244 LERVRAVF 251
>gi|145630643|ref|ZP_01786422.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Haemophilus
influenzae R3021]
gi|144983769|gb|EDJ91219.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Haemophilus
influenzae R3021]
Length = 254
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/247 (43%), Positives = 149/247 (60%), Gaps = 11/247 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPARFASSR GKPL +I GKPMIQ +E++ L + +++ATD+E +A+ + FGA+
Sbjct: 6 IIPARFASSRLPGKPLADIAGKPMIQHVFEKA-LQSGASRVIIATDNENVADVAKSFGAE 64
Query: 113 VIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS + +GTER E ++KL +I+VNIQGDEPLI P I+ V L +
Sbjct: 65 VCMTSVNHNSGTERLAEVVEKLAIPDNEIIVNIQGDEPLIPPVIVRQVADNLAKFNVNMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ--------FPYLL 223
S AV E+ F+ N VK + D GY +YFSR +IPY++ +N Q YL
Sbjct: 125 SLAVKIHDAEELFNRNAVKVLTDKDGYVLYFSRSVIPYDRDQFMNLQDVQKVQLADAYLR 184
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDV 282
H+GI +Y + F+K Y PT L+ E LEQL+VL NG ++ V + + A GVD ED+
Sbjct: 185 HIGIYAYRAGFIKQYVQWAPTQLENLEKLEQLRVLYNGERIHVELAKEVPAVGVDTAEDL 244
Query: 283 EKIESFM 289
EK+ +
Sbjct: 245 EKVRLIL 251
>gi|422923180|ref|ZP_16956339.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
BJG-01]
gi|341644353|gb|EGS68575.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
BJG-01]
Length = 257
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 105/247 (42%), Positives = 149/247 (60%), Gaps = 9/247 (3%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ S+R GKPL +I GKPMIQ +E++ A D +++ATDDE++ + Q FG
Sbjct: 6 VIPARYQSTRLPGKPLADIGGKPMIQWVYEQAMQAGA-DRVIIATDDERVEQAVQAFGGV 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS + ++GTER E + K+ D IVVN+QGDEPLI P II V L A +
Sbjct: 65 VCMTSPNHQSGTERLAEVVAKMVIPADHIVVNVQGDEPLIPPAIIRQVADNLAACSAPMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYN-----KSGKVNPQFPYLLHLG 226
+ AV + F+PN VK + D +GYA+YFSR IP++ K+ K Q P L H+G
Sbjct: 125 TLAVEIEDEAEVFNPNAVKVITDKNGYALYFSRATIPWDRDNFAKADKAIVQ-PLLRHIG 183
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKI 285
I +Y + F+ Y P+ L+ E LEQL+VL +G K+ V + ++ GVD PED+E +
Sbjct: 184 IYAYRAGFINTYLDWQPSQLEKIECLEQLRVLWHGEKIHVAVALEAPPAGVDTPEDLEVV 243
Query: 286 ESFMRER 292
+ ER
Sbjct: 244 RRIVAER 250
>gi|15641877|ref|NP_231509.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio cholerae O1
biovar El Tor str. N16961]
gi|121587320|ref|ZP_01677092.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio cholerae
2740-80]
gi|121727120|ref|ZP_01680294.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio cholerae
V52]
gi|147673188|ref|YP_001217409.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio cholerae
O395]
gi|153818855|ref|ZP_01971522.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio cholerae
NCTC 8457]
gi|153823099|ref|ZP_01975766.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio cholerae
B33]
gi|227082005|ref|YP_002810556.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio cholerae
M66-2]
gi|227118323|ref|YP_002820219.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio cholerae
O395]
gi|229508028|ref|ZP_04397533.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio cholerae BX
330286]
gi|229511733|ref|ZP_04401212.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio cholerae
B33]
gi|229518871|ref|ZP_04408314.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio cholerae
RC9]
gi|229607575|ref|YP_002878223.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio cholerae
MJ-1236]
gi|254848962|ref|ZP_05238312.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio cholerae
MO10]
gi|255745365|ref|ZP_05419314.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio cholera
CIRS 101]
gi|262153532|ref|ZP_06028661.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio cholerae
INDRE 91/1]
gi|262167432|ref|ZP_06035139.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio cholerae
RC27]
gi|297579394|ref|ZP_06941322.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
RC385]
gi|298498085|ref|ZP_07007892.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
MAK 757]
gi|360035759|ref|YP_004937522.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio cholerae O1
str. 2010EL-1786]
gi|379741711|ref|YP_005333680.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio cholerae
IEC224]
gi|417813919|ref|ZP_12460572.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-49A2]
gi|417817656|ref|ZP_12464285.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HCUF01]
gi|418334894|ref|ZP_12943808.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-06A1]
gi|418338512|ref|ZP_12947406.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-23A1]
gi|418346429|ref|ZP_12951191.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-28A1]
gi|418350191|ref|ZP_12954922.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-43A1]
gi|418356258|ref|ZP_12958977.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-61A1]
gi|419826855|ref|ZP_14350354.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
CP1033(6)]
gi|421318503|ref|ZP_15769071.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
CP1032(5)]
gi|421321647|ref|ZP_15772200.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
CP1038(11)]
gi|421325445|ref|ZP_15775969.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
CP1041(14)]
gi|421329107|ref|ZP_15779617.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
CP1042(15)]
gi|421333014|ref|ZP_15783491.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
CP1046(19)]
gi|421336603|ref|ZP_15787064.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
CP1048(21)]
gi|421340034|ref|ZP_15790466.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-20A2]
gi|421348308|ref|ZP_15798685.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-46A1]
gi|421351609|ref|ZP_15801974.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HE-25]
gi|422896982|ref|ZP_16934432.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-40A1]
gi|422903184|ref|ZP_16938160.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-48A1]
gi|422907067|ref|ZP_16941871.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-70A1]
gi|422913914|ref|ZP_16948420.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HFU-02]
gi|422926120|ref|ZP_16959134.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-38A1]
gi|423145439|ref|ZP_17133033.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-19A1]
gi|423150115|ref|ZP_17137429.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-21A1]
gi|423153935|ref|ZP_17141116.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-22A1]
gi|423157019|ref|ZP_17144112.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-32A1]
gi|423160589|ref|ZP_17147529.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-33A2]
gi|423165409|ref|ZP_17152138.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-48B2]
gi|423731426|ref|ZP_17704729.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-17A1]
gi|423768149|ref|ZP_17712851.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-50A2]
gi|423895317|ref|ZP_17727064.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-62A1]
gi|423930755|ref|ZP_17731458.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-77A1]
gi|424002870|ref|ZP_17745945.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-17A2]
gi|424006659|ref|ZP_17749629.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-37A1]
gi|424024640|ref|ZP_17764291.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-62B1]
gi|424027525|ref|ZP_17767128.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-69A1]
gi|424586797|ref|ZP_18026376.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
CP1030(3)]
gi|424595444|ref|ZP_18034765.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
CP1040(13)]
gi|424599361|ref|ZP_18038542.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio Cholerae
CP1044(17)]
gi|424610875|ref|ZP_18049714.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-39A1]
gi|424617667|ref|ZP_18056339.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-42A1]
gi|424645411|ref|ZP_18083147.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-56A2]
gi|424656999|ref|ZP_18094284.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-81A2]
gi|440710078|ref|ZP_20890729.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio cholerae
4260B]
gi|443504237|ref|ZP_21071195.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-64A1]
gi|443508135|ref|ZP_21074898.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-65A1]
gi|443511977|ref|ZP_21078615.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-67A1]
gi|443515535|ref|ZP_21082046.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-68A1]
gi|443519329|ref|ZP_21085725.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-71A1]
gi|443524219|ref|ZP_21090432.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-72A2]
gi|443531817|ref|ZP_21097831.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-7A1]
gi|443535614|ref|ZP_21101492.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-80A1]
gi|443539161|ref|ZP_21105015.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-81A1]
gi|449055695|ref|ZP_21734363.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio cholerae O1
str. Inaba G4222]
gi|22095807|sp|Q9KQX2.1|KDSB_VIBCH RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|172047653|sp|A5F726.1|KDSB_VIBC3 RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|254807770|sp|C3LNH9.1|KDSB_VIBCM RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|307568402|pdb|3OAM|A Chain A, Crystal Structure Of Cytidylyltransferase From Vibrio
Cholerae
gi|307568403|pdb|3OAM|B Chain B, Crystal Structure Of Cytidylyltransferase From Vibrio
Cholerae
gi|307568404|pdb|3OAM|C Chain C, Crystal Structure Of Cytidylyltransferase From Vibrio
Cholerae
gi|307568405|pdb|3OAM|D Chain D, Crystal Structure Of Cytidylyltransferase From Vibrio
Cholerae
gi|9656406|gb|AAF95023.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio cholerae O1
biovar El Tor str. N16961]
gi|121548480|gb|EAX58538.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio cholerae
2740-80]
gi|121630498|gb|EAX62890.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio cholerae
V52]
gi|126510583|gb|EAZ73177.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio cholerae
NCTC 8457]
gi|126519390|gb|EAZ76613.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio cholerae
B33]
gi|146315071|gb|ABQ19610.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio cholerae
O395]
gi|227009893|gb|ACP06105.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio cholerae
M66-2]
gi|227013773|gb|ACP09983.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio cholerae
O395]
gi|229343560|gb|EEO08535.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio cholerae
RC9]
gi|229351698|gb|EEO16639.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio cholerae
B33]
gi|229355533|gb|EEO20454.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio cholerae BX
330286]
gi|229370230|gb|ACQ60653.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio cholerae
MJ-1236]
gi|254844667|gb|EET23081.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio cholerae
MO10]
gi|255737195|gb|EET92591.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio cholera
CIRS 101]
gi|262024129|gb|EEY42823.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio cholerae
RC27]
gi|262030659|gb|EEY49294.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio cholerae
INDRE 91/1]
gi|297536988|gb|EFH75821.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
RC385]
gi|297542418|gb|EFH78468.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
MAK 757]
gi|340036405|gb|EGQ97381.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-49A2]
gi|340037379|gb|EGQ98354.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HCUF01]
gi|341621274|gb|EGS47020.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-70A1]
gi|341621418|gb|EGS47163.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-48A1]
gi|341622343|gb|EGS48006.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-40A1]
gi|341637575|gb|EGS62253.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HFU-02]
gi|341646326|gb|EGS70440.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-38A1]
gi|356417603|gb|EHH71218.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-06A1]
gi|356418475|gb|EHH72072.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-21A1]
gi|356423049|gb|EHH76510.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-19A1]
gi|356428495|gb|EHH81721.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-22A1]
gi|356430154|gb|EHH83363.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-23A1]
gi|356433508|gb|EHH86697.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-28A1]
gi|356439676|gb|EHH92641.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-32A1]
gi|356444687|gb|EHH97496.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-43A1]
gi|356445686|gb|EHH98488.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-33A2]
gi|356450930|gb|EHI03635.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-48B2]
gi|356452756|gb|EHI05435.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-61A1]
gi|356646913|gb|AET26968.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio cholerae O1
str. 2010EL-1786]
gi|378795221|gb|AFC58692.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio cholerae
IEC224]
gi|395916761|gb|EJH27591.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
CP1032(5)]
gi|395917283|gb|EJH28111.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
CP1041(14)]
gi|395918641|gb|EJH29465.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
CP1038(11)]
gi|395927641|gb|EJH38404.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
CP1042(15)]
gi|395928416|gb|EJH39169.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
CP1046(19)]
gi|395931702|gb|EJH42446.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
CP1048(21)]
gi|395939317|gb|EJH49999.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-20A2]
gi|395942887|gb|EJH53563.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-46A1]
gi|395952054|gb|EJH62668.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HE-25]
gi|395959004|gb|EJH69455.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-56A2]
gi|395962583|gb|EJH72879.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-42A1]
gi|395973718|gb|EJH83272.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
CP1030(3)]
gi|408007324|gb|EKG45407.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-39A1]
gi|408032337|gb|EKG68923.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
CP1040(13)]
gi|408041861|gb|EKG77949.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio Cholerae
CP1044(17)]
gi|408053877|gb|EKG88876.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-81A2]
gi|408607645|gb|EKK81048.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
CP1033(6)]
gi|408624048|gb|EKK97000.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-17A1]
gi|408633851|gb|EKL06143.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-50A2]
gi|408654187|gb|EKL25329.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-77A1]
gi|408655117|gb|EKL26242.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-62A1]
gi|408845267|gb|EKL85383.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-37A1]
gi|408846040|gb|EKL86152.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-17A2]
gi|408870080|gb|EKM09360.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-62B1]
gi|408878828|gb|EKM17821.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-69A1]
gi|439974301|gb|ELP50478.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio cholerae
4260B]
gi|443431182|gb|ELS73734.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-64A1]
gi|443435077|gb|ELS81221.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-65A1]
gi|443438960|gb|ELS88675.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-67A1]
gi|443442945|gb|ELS96247.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-68A1]
gi|443446747|gb|ELT03403.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-71A1]
gi|443449553|gb|ELT09844.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-72A2]
gi|443457207|gb|ELT24604.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-7A1]
gi|443461154|gb|ELT32227.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-80A1]
gi|443465261|gb|ELT39921.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-81A1]
gi|448264734|gb|EMB01971.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio cholerae O1
str. Inaba G4222]
Length = 252
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 105/247 (42%), Positives = 148/247 (59%), Gaps = 9/247 (3%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ S+R GKPL +I GKPMIQ +E++ A D +++ATDDE++ + Q FG
Sbjct: 6 VIPARYQSTRLPGKPLADIGGKPMIQWVYEQAMQAGA-DRVIIATDDERVEQAVQAFGGV 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS + ++GTER E + K+ D IVVN+QGDEPLI P II V L A +
Sbjct: 65 VCMTSPNHQSGTERLAEVVAKMAIPADHIVVNVQGDEPLIPPAIIRQVADNLAACSAPMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYN-----KSGKVNPQFPYLLHLG 226
+ AV + F+PN VK + D GYA+YFSR IP++ K+ K Q P L H+G
Sbjct: 125 TLAVEIEDEAEVFNPNAVKVITDKSGYALYFSRATIPWDRDNFAKADKAIVQ-PLLRHIG 183
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKI 285
I +Y + F+ Y P+ L+ E LEQL+VL +G K+ V + ++ GVD PED+E +
Sbjct: 184 IYAYRAGFINTYLDWQPSQLEKIECLEQLRVLWHGEKIHVAVALEAPPAGVDTPEDLEVV 243
Query: 286 ESFMRER 292
+ ER
Sbjct: 244 RRIVAER 250
>gi|149199438|ref|ZP_01876474.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Lentisphaera
araneosa HTCC2155]
gi|149137516|gb|EDM25933.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Lentisphaera
araneosa HTCC2155]
Length = 245
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/245 (40%), Positives = 151/245 (61%), Gaps = 6/245 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V +IPAR+ S+RF GKPL I GKPMIQ T+E++ A+ +D ++VATDDEKI C + FG
Sbjct: 4 VAVIPARYGSTRFPGKPLALIAGKPMIQWTYEKAA-ASKVDRVIVATDDEKIFACVKNFG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAV 170
+V+MT GT+R EA+++++ D+++N+QGDEPL+ E+ID +V ++ +P
Sbjct: 63 GEVVMTRSDHPTGTDRIAEAVKEID--CDLIINLQGDEPLLPTEVIDELVDRMKNSPQVN 120
Query: 171 FSTAVT--SLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQ 228
T S E+ +PN VK V+D A+YFSR +P++++ Y LH GI
Sbjct: 121 MGTVAVRKSFDSEEYTNPNNVKVVLDKQQQALYFSRCSMPFSRNQPEEGDSIY-LHWGIY 179
Query: 229 SYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESF 288
+Y L + L+ E LEQL+VLE+G K+ V D E+ GVD PEDV K+E
Sbjct: 180 AYRRQLLFDFITWPQGSLEKIESLEQLRVLEHGEKILVAISDRESVGVDTPEDVAKVEQL 239
Query: 289 MRERN 293
+++++
Sbjct: 240 LKDQS 244
>gi|325281135|ref|YP_004253677.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Odoribacter
splanchnicus DSM 20712]
gi|324312944|gb|ADY33497.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Odoribacter
splanchnicus DSM 20712]
Length = 257
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/242 (41%), Positives = 144/242 (59%), Gaps = 9/242 (3%)
Query: 50 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQF 109
V+ +IPAR+AS+RF GKPL I GKPMIQ E+++L + VATDD++I + F
Sbjct: 3 VLILIPARYASTRFPGKPLAEIGGKPMIQHVVEKAQLVS--QDAFVATDDQRIYDRVVGF 60
Query: 110 GADVIMTSESCRNGTERCNEALQKL----EKKYDIVVNIQGDEPLIEPEIIDGVVKALQA 165
G V+MTS ++GT+RC EA + + K YD+VVNIQGDEP I+P+ + ++ +
Sbjct: 61 GGKVVMTSADHKSGTDRCCEAYRHIVADYRKTYDVVVNIQGDEPFIQPDQVRALIACFED 120
Query: 166 APDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPY---NKSGKVNPQFPYL 222
+ + A D FDPN+VK V + A+YFSR IPY + G+ + P+
Sbjct: 121 PRIQIATLAKQFDTNADIFDPNKVKVVCSSLQTALYFSRSAIPYCRGKEQGEWSAVIPFY 180
Query: 223 LHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDV 282
H+G+ +Y L+ L L+ E LEQL+ LENGYK+ V DHE+ G+D PED+
Sbjct: 181 KHVGMYAYRPEVLREITALPQGKLEKAESLEQLRWLENGYKIAVRFTDHESVGIDTPEDL 240
Query: 283 EK 284
E+
Sbjct: 241 ER 242
>gi|262039362|ref|ZP_06012675.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptotrichia
goodfellowii F0264]
gi|261746624|gb|EEY34150.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptotrichia
goodfellowii F0264]
Length = 247
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/248 (39%), Positives = 149/248 (60%), Gaps = 4/248 (1%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+++G+IPAR+AS+RFEGKPL I G PMI+ ++R++ + +D LVVATDDE+I +
Sbjct: 2 KILGVIPARYASTRFEGKPLKEINGSPMIEWVYKRAE-NSGIDKLVVATDDERIFNAVKS 60
Query: 109 FGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
FG + +MTS NGT R E + E +D V+NIQGDEPLI+ + I+ + +
Sbjct: 61 FGGNAVMTSTEHENGTSRIIEVINNPEYNDFDFVINIQGDEPLIDIKSINMIADNFRQKK 120
Query: 168 DAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+ + + E+ +PN VK + D + AIYFSR +IPY ++ F Y H+GI
Sbjct: 121 SEIVTLKKEFKEKEEIKNPNIVKVITDFNDNAIYFSRSVIPYERNEV--KDFKYYKHIGI 178
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
Y S FL L L+ E LEQL+ +ENG+K+KV++ E GVD ED++++
Sbjct: 179 YGYTSKFLNELKNLKNGVLEKIESLEQLRFIENGHKIKVLETTSEVIGVDTEEDLKEVIE 238
Query: 288 FMRERNLS 295
++ + N++
Sbjct: 239 YINKNNIT 246
>gi|255692560|ref|ZP_05416235.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Bacteroides
finegoldii DSM 17565]
gi|260621706|gb|EEX44577.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Bacteroides
finegoldii DSM 17565]
Length = 250
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 101/251 (40%), Positives = 151/251 (60%), Gaps = 10/251 (3%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR+AS+RF KPL + GK +IQR +E ++A LD VATDDE+I + +
Sbjct: 2 KFLGIIPARYASTRFPAKPLAILGGKTVIQRVYE--QVAGILDDAYVATDDERIEKAVKA 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG V+MTS ++GT+RC EA K+ +D+VVNIQGDEP I+P ++ VKA P
Sbjct: 60 FGGKVVMTSVHHKSGTDRCYEACVKIGGDFDVVVNIQGDEPFIQPSQLNA-VKACFEDPT 118
Query: 169 AVFSTAVTSLKPEDAF----DPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF---PY 221
+T V ++ F + N K VV+ + A+YFSR +IPY ++ + Y
Sbjct: 119 TQIATLVKPFTADEPFAVLENVNSPKVVVNANWNALYFSRSIIPYQRNAEKKDWLKGHTY 178
Query: 222 LLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPED 281
H+G+ +Y + L+ L + L++ E LEQL+ LENGYK+KV + E G+D P+D
Sbjct: 179 YKHIGLYAYRTEVLREITALPQSSLEIAESLEQLRWLENGYKIKVGISEVETIGIDTPQD 238
Query: 282 VEKIESFMRER 292
+ + E F++ R
Sbjct: 239 LARAEEFLKNR 249
>gi|27365421|ref|NP_760949.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio vulnificus
CMCP6]
gi|29611741|sp|Q8DAU9.1|KDSB_VIBVU RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|27361568|gb|AAO10476.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio
vulnificus CMCP6]
Length = 251
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 104/249 (41%), Positives = 150/249 (60%), Gaps = 11/249 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ S+R GKPL +I GKPM+Q +E++ A D +++ATDD+++A+ FG
Sbjct: 6 VIPARYQSTRLPGKPLADIAGKPMVQWVYEQAIQAGAQD-VIIATDDQRVADAVAVFGGK 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQA--APDA 169
V MTS + +GTER E +Q + D IVVN+QGDEPLI P II V + L A AP A
Sbjct: 65 VCMTSPNHESGTERLAEVVQLMGIADDHIVVNVQGDEPLIPPSIIRQVAENLAASSAPMA 124
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS----GKVNPQFPYLLHL 225
A+TS E+ F+PN VK V D GYA+YFSR IP+++ G+V + + H+
Sbjct: 125 TLGVAITS--EEEVFNPNAVKVVTDKEGYALYFSRATIPWDRDAFARGEVLTEHSLMRHI 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI +Y + F+ Y P+ L+ E LEQL+VL G K+ V + + GVD PED+E
Sbjct: 183 GIYAYRAGFINTYVNWQPSSLEKIECLEQLRVLWYGEKIHVELAKEAPPAGVDTPEDLEL 242
Query: 285 IESFMRERN 293
+ + ++
Sbjct: 243 VRELIAAKS 251
>gi|423300069|ref|ZP_17278094.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bacteroides
finegoldii CL09T03C10]
gi|408473878|gb|EKJ92400.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bacteroides
finegoldii CL09T03C10]
Length = 250
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 101/251 (40%), Positives = 150/251 (59%), Gaps = 10/251 (3%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR+AS+RF KPL + GK +IQR +E ++A LD VATDDE+I E +
Sbjct: 2 KFLGIIPARYASTRFPAKPLAILGGKTVIQRVYE--QVAGILDDAYVATDDERIEEAVKA 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG V+MTS ++GT+RC EA K+ +D+VVNIQGDEP I+P ++ VK P
Sbjct: 60 FGGKVVMTSVHHKSGTDRCYEACVKIGGDFDVVVNIQGDEPFIQPSQLNA-VKTCFEDPT 118
Query: 169 AVFSTAVTSLKPEDAF----DPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF---PY 221
+T V ++ F + N K VV+ + A+YFSR +IPY ++ + Y
Sbjct: 119 TQIATLVKPFTADEPFAVLENVNSPKVVVNANWNALYFSRSIIPYQRNAEKKDWLKGHTY 178
Query: 222 LLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPED 281
H+G+ +Y + L+ L + L++ E LEQL+ LENGYK+KV + E G+D P+D
Sbjct: 179 YKHIGLYAYRTEVLREITALPQSSLEIAESLEQLRWLENGYKIKVGISEVETIGIDTPQD 238
Query: 282 VEKIESFMRER 292
+ + E F++ R
Sbjct: 239 LARAEEFLKNR 249
>gi|282880742|ref|ZP_06289443.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Prevotella
timonensis CRIS 5C-B1]
gi|281305404|gb|EFA97463.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Prevotella
timonensis CRIS 5C-B1]
Length = 248
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 94/244 (38%), Positives = 150/244 (61%), Gaps = 5/244 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR++S+RF GKPL + KP+IQ +E +++ L VATDD++I +
Sbjct: 2 KFIGIIPARYSSTRFPGKPLALLNHKPVIQHVYE--QVSAVLHETYVATDDQRIYDTVLS 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG +MTS++ ++GT+R EA++ L+ D+++NIQGDEP I+ E I + + A
Sbjct: 60 FGGKAVMTSKNHQSGTDRIQEAVEILQPTCDVILNIQGDEPFIQKEQIASLCQCFDDANT 119
Query: 169 AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNP---QFPYLLHL 225
+ + + +PN K V++N GYA+YFSR +IP+ ++ K QFP+L HL
Sbjct: 120 QIATLGKPFENQKAVENPNSPKIVLNNQGYAMYFSRSVIPFIRNKKDEQWFVQFPFLKHL 179
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKI 285
G+ +Y LK L + L+L E LEQL+ L+NGY++KV + + G+D PED+++
Sbjct: 180 GVYAYRKEVLKQITQLPQSSLELAESLEQLRWLQNGYRIKVAITNIDTIGIDTPEDLQRA 239
Query: 286 ESFM 289
E F+
Sbjct: 240 ERFL 243
>gi|419830344|ref|ZP_14353829.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-1A2]
gi|422917724|ref|ZP_16952042.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-02A1]
gi|423822630|ref|ZP_17716640.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-55C2]
gi|423856021|ref|ZP_17720445.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-59A1]
gi|423882895|ref|ZP_17724032.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-60A1]
gi|423998154|ref|ZP_17741406.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-02C1]
gi|424017048|ref|ZP_17756877.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-55B2]
gi|424019972|ref|ZP_17759758.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-59B1]
gi|424633868|ref|ZP_18071968.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-52A1]
gi|424640860|ref|ZP_18078743.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-56A1]
gi|424648927|ref|ZP_18086590.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-57A1]
gi|443527847|ref|ZP_21093896.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-78A1]
gi|341636606|gb|EGS61300.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-02A1]
gi|408018400|gb|EKG55853.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-52A1]
gi|408023578|gb|EKG60739.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-56A1]
gi|408032983|gb|EKG69548.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-57A1]
gi|408620117|gb|EKK93129.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-1A2]
gi|408634606|gb|EKL06841.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-55C2]
gi|408640924|gb|EKL12706.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-59A1]
gi|408641019|gb|EKL12800.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-60A1]
gi|408852509|gb|EKL92331.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-02C1]
gi|408859741|gb|EKL99395.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-55B2]
gi|408867066|gb|EKM06428.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-59B1]
gi|443453719|gb|ELT17537.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-78A1]
Length = 252
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 104/247 (42%), Positives = 150/247 (60%), Gaps = 9/247 (3%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ S+R GKPL +I GKPMIQ +E++ A D +++ATDDE++ + Q FG
Sbjct: 6 VIPARYQSTRLPGKPLADIGGKPMIQWVYEQAMQAGA-DRVIIATDDERVEQAVQAFGGV 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS + ++GTER E + K+ D IVVN+QGDEPLI P II V L A +
Sbjct: 65 VCMTSPNHQSGTERLAEVVAKMAIPADHIVVNVQGDEPLIPPAIIRQVADNLAACSAPMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYN-----KSGKVNPQFPYLLHLG 226
+ AV + F+PN VK + D +GYA+YFSR IP++ K+ K Q P L H+G
Sbjct: 125 TLAVEIEDEAEVFNPNAVKVITDKNGYALYFSRATIPWDRDNFAKADKAIVQ-PLLRHIG 183
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKI 285
I +Y + F+ Y P+ L+ E LEQL+VL +G K+ V + ++ GVD PED++ +
Sbjct: 184 IYAYRAGFINTYLDWQPSQLEKIECLEQLRVLWHGEKIHVAVALEAPPAGVDTPEDLKVV 243
Query: 286 ESFMRER 292
+ + ER
Sbjct: 244 QRIVAER 250
>gi|262171158|ref|ZP_06038836.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio mimicus
MB-451]
gi|261892234|gb|EEY38220.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio mimicus
MB-451]
Length = 251
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 107/248 (43%), Positives = 152/248 (61%), Gaps = 11/248 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ S+R GKPL +I GKPMIQ +E++ A D ++VATDD+++ + Q FG
Sbjct: 6 VIPARYQSTRLPGKPLADIGGKPMIQWVYEQAMQAGA-DRVIVATDDKRVEQAVQAFGGV 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS ++GTER E ++K+ D IVVN+QGDEPLI P II V L A +
Sbjct: 65 VCMTSPDHQSGTERLAEVVEKMAIPADHIVVNVQGDEPLIPPVIIRQVADNLAACSAPMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS--GKVNPQF--PYLLHLGI 227
+ AV + F+PN VK + D +GYA+YFSR IP+++ KV+ P L H+GI
Sbjct: 125 TLAVEIEDEAEVFNPNAVKVITDKNGYALYFSRATIPWDRDNFAKVDRSIAQPLLRHIGI 184
Query: 228 QSYDSNFLKIYPGLHPTPLQLE--EDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
+Y + F+ Y LH P QLE E LEQL+VL +G K+ V + ++ GVD PED+E
Sbjct: 185 YAYRAGFINTY--LHWQPSQLEKIECLEQLRVLWHGEKIHVAVALEAPPAGVDTPEDLEV 242
Query: 285 IESFMRER 292
+ F+ ++
Sbjct: 243 VRQFIAKQ 250
>gi|386833989|ref|YP_006239304.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pasteurella
multocida subsp. multocida str. 3480]
gi|385200690|gb|AFI45545.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pasteurella
multocida subsp. multocida str. 3480]
Length = 258
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/251 (42%), Positives = 149/251 (59%), Gaps = 15/251 (5%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR+AS+R GKPL I GKPMI +E++ + + ++VATD E++A + FGA+
Sbjct: 7 IIPARYASTRLPGKPLAEIAGKPMIAHVFEKA-MQSGAKRVIVATDHEQVATVARGFGAE 65
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTSE+ ++GTER E ++KL D I+VNIQGDEPLI P I+ V + L +
Sbjct: 66 VCMTSETHQSGTERLAEVVEKLGIAEDEIIVNIQGDEPLIPPAIVRQVAENLAKYQVKMA 125
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPY------------NKSGKVNPQF 219
S AV PE+ F+PN VK + D+ GY +YFSR IP+ N G++
Sbjct: 126 SLAVNITDPEELFNPNAVKVLTDHAGYVLYFSRAPIPWHRDQFASLQKEKNTRGQLVLSD 185
Query: 220 PYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDA 278
YL H+GI +Y + F+K Y P+ L+ E LEQL+VL G K+ V + + GVD
Sbjct: 186 HYLRHIGIYAYRAGFIKQYIQWQPSALEQIESLEQLRVLWYGEKIHVELAREVPPVGVDT 245
Query: 279 PEDVEKIESFM 289
ED+EK+ S +
Sbjct: 246 AEDLEKVRSIL 256
>gi|386013327|ref|YP_005931604.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas
putida BIRD-1]
gi|313500033|gb|ADR61399.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas
putida BIRD-1]
Length = 428
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 93/241 (38%), Positives = 144/241 (59%), Gaps = 5/241 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
RV +IPAR+ S+R GKPL +I GKPM+Q +ER+ + + +++ATDDE++A+ QQ
Sbjct: 7 RVAIVIPARYGSTRLPGKPLADIAGKPMVQHVYERALQVKSAEQVIIATDDERVAKAVQQ 66
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG +MTS +GT+R E ++++E DI +N+QGDEPL+ PE I+ +V + A
Sbjct: 67 FGGQYVMTSPDHPSGTDRLAEVMRQVEA--DIYINLQGDEPLVRPEDIETLVSGMLADNS 124
Query: 169 AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQ 228
T + ++A +PN VK V+ +G A+YFSR IP+ + + YL H+G+
Sbjct: 125 VSVGTLCHHINAQEARNPNTVKVVLAANGNALYFSRSSIPFPRESEAA---TYLKHVGVY 181
Query: 229 SYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESF 288
+Y N L Y L ++ E LEQL++L GY ++ V+ GVD PE +E++ S
Sbjct: 182 AYRRNVLAEYASLAQPMIENAEKLEQLRLLAAGYCIRAYHVEPTGPGVDTPECLEQVRSI 241
Query: 289 M 289
M
Sbjct: 242 M 242
>gi|258621377|ref|ZP_05716411.1| 3-deoxy-manno-octulosonate cytidylyltransferase synthetase [Vibrio
mimicus VM573]
gi|424807079|ref|ZP_18232487.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio mimicus
SX-4]
gi|258586765|gb|EEW11480.1| 3-deoxy-manno-octulosonate cytidylyltransferase synthetase [Vibrio
mimicus VM573]
gi|342325021|gb|EGU20801.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio mimicus
SX-4]
Length = 251
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 105/249 (42%), Positives = 152/249 (61%), Gaps = 11/249 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ S+R GKPL +I GKPMIQ +E++ A D +++ATDD+++ + Q FG
Sbjct: 6 VIPARYQSTRLPGKPLADIGGKPMIQWVYEQAMQAGA-DRVIIATDDQRVEQAVQAFGGV 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS ++GTER E ++K+ D IVVN+QGDEPLI P II V L A +
Sbjct: 65 VCMTSPDHQSGTERLAEVVEKMAIPADHIVVNVQGDEPLIPPAIIRQVADNLAACSAPMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS--GKVNPQF--PYLLHLGI 227
+ AV + F+PN VK + D +GYA+YFSR IP+++ K + P L H+GI
Sbjct: 125 TLAVEIEDEAEVFNPNAVKVITDKNGYALYFSRATIPWDRDNFAKADKSITQPLLRHIGI 184
Query: 228 QSYDSNFLKIYPGLHPTPLQLE--EDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
+Y + F+ Y LH P QLE E LEQL+VL +G K+ V + ++ GVD PED+E
Sbjct: 185 YAYRAGFINTY--LHWQPSQLEKIECLEQLRVLWHGEKIHVAVALEAPPAGVDTPEDLEV 242
Query: 285 IESFMRERN 293
+ F+ +++
Sbjct: 243 VRQFIAKQH 251
>gi|153825210|ref|ZP_01977877.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio cholerae
MZO-2]
gi|149741189|gb|EDM55240.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio cholerae
MZO-2]
Length = 251
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 104/244 (42%), Positives = 148/244 (60%), Gaps = 9/244 (3%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ S+R GKPL +I GKPMIQ +E++ A D +++ATDDE++ + Q FG
Sbjct: 6 VIPARYQSTRLPGKPLADIGGKPMIQWVYEQAMQAGA-DRVIIATDDERVEQAVQAFGGV 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS + ++GTER E + K+ D IVVN+QGDEPLI P II V L A +
Sbjct: 65 VCMTSPNHQSGTERLAEVVAKMAIPADHIVVNVQGDEPLIPPAIIRQVADNLAACSAPMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYN-----KSGKVNPQFPYLLHLG 226
+ AV + F+PN VK + D +GYA+YFSR IP++ K+ K Q P L H+G
Sbjct: 125 TLAVEIEDEAEVFNPNAVKVITDKNGYALYFSRATIPWDRDNFAKADKAIVQ-PLLRHIG 183
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKI 285
I +Y + F+ Y P+ L+ E LEQL+VL +G K+ V + ++ GVD PED+E +
Sbjct: 184 IYAYRAGFINTYLDWQPSQLEKIECLEQLRVLWHGEKIHVAVALEAPPAGVDTPEDLEVV 243
Query: 286 ESFM 289
F+
Sbjct: 244 RQFI 247
>gi|113970189|ref|YP_733982.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Shewanella sp.
MR-4]
gi|114047622|ref|YP_738172.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Shewanella sp.
MR-7]
gi|117920351|ref|YP_869543.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Shewanella sp.
ANA-3]
gi|122943854|sp|Q0HJ42.1|KDSB_SHESM RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|122944648|sp|Q0HUU0.1|KDSB_SHESR RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|226724338|sp|A0KWG8.1|KDSB_SHESA RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|113884873|gb|ABI38925.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shewanella sp.
MR-4]
gi|113889064|gb|ABI43115.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shewanella sp.
MR-7]
gi|117612683|gb|ABK48137.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shewanella sp.
ANA-3]
Length = 245
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 102/241 (42%), Positives = 143/241 (59%), Gaps = 8/241 (3%)
Query: 50 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQF 109
V +IPAR+ SSRF GKPL I GKPMIQ +ER+ LA L ++ VATDDE+I + F
Sbjct: 3 VTLLIPARYGSSRFPGKPLAPINGKPMIQHVYERASLAKGLTNIYVATDDERIKSAVEGF 62
Query: 110 GADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
G V+MTS +GT+R N+A+ +L K D+V+N+QGD+PLI+P I+ V+ + P
Sbjct: 63 GGKVVMTSPDAASGTDRINDAINQLGLKDDDLVINLQGDQPLIDPTSIEQVISLFERHP- 121
Query: 169 AVFSTAVTS---LKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHL 225
F A + + DP VK V DN YA+YFSR IP+ + K +P HL
Sbjct: 122 GEFEMATLGYEIVNKAELDDPMHVKMVFDNDYYALYFSRARIPFGRDTK---DYPVYKHL 178
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKI 285
G+ +Y F++ + L L+ E LEQL+ LE+G+K+KV ++ VD PED+ K
Sbjct: 179 GVYAYTRRFVQAFAALPLGRLEDLEKLEQLRALEHGHKIKVAISAFDSIEVDTPEDIRKC 238
Query: 286 E 286
E
Sbjct: 239 E 239
>gi|37680537|ref|NP_935146.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio vulnificus
YJ016]
gi|320155806|ref|YP_004188185.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio vulnificus
MO6-24/O]
gi|56749079|sp|Q7MJ10.1|KDSB_VIBVY RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|37199285|dbj|BAC95117.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio vulnificus
YJ016]
gi|319931118|gb|ADV85982.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio vulnificus
MO6-24/O]
Length = 251
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 104/249 (41%), Positives = 150/249 (60%), Gaps = 11/249 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ S+R GKPL +I GKPM+Q +E++ A D +++ATDD+++A+ FG
Sbjct: 6 VIPARYQSTRLPGKPLADIAGKPMVQWVYEQAIQAGAQD-VIIATDDQRVADAVAVFGGK 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQA--APDA 169
V MTS + +GTER E +Q + D IVVN+QGDEPLI P II V + L A AP A
Sbjct: 65 VCMTSPNHESGTERLAEVVQLMGIADDHIVVNVQGDEPLIPPSIIRQVAENLAASSAPMA 124
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS----GKVNPQFPYLLHL 225
A+TS E+ F+PN VK V D GYA+YFSR IP+++ G+V + + H+
Sbjct: 125 TLGVAITS--EEEVFNPNAVKVVTDKEGYALYFSRATIPWDRDAFARGEVLTEHSLMRHI 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI +Y + F+ Y P+ L+ E LEQL+VL G K+ V + + GVD PED+E
Sbjct: 183 GIYAYRAGFINTYVNWQPSSLEKIECLEQLRVLWYGEKIHVELAKEAPPAGVDTPEDLEL 242
Query: 285 IESFMRERN 293
+ + ++
Sbjct: 243 VRKIIAAKS 251
>gi|388602007|ref|ZP_10160403.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio campbellii
DS40M4]
Length = 252
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 102/243 (41%), Positives = 144/243 (59%), Gaps = 7/243 (2%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ASSR GKPL +I GKPMIQ +E++ A D +++ATDDE+++ + FG
Sbjct: 6 VIPARYASSRLPGKPLADIGGKPMIQWVYEQALQAGAED-VIIATDDERVSAVAEHFGGK 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS + +GTER E ++K+ D IVVN+QGDEPLI P II V L +
Sbjct: 65 VCMTSPNHESGTERLAEVVEKMAIPADHIVVNVQGDEPLIPPSIIRQVADNLAGCDAPMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ----FPYLLHLGI 227
+ AV E+ F+PN VK V D GYA+YFSR IP+++ P + H+GI
Sbjct: 125 TLAVEIESEEEVFNPNAVKVVADERGYAMYFSRATIPWDRDNFAKQDKTIANPLMRHIGI 184
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKIE 286
+Y + F+ Y P+ L+ E LEQL+VL G K+ V + + A GVD PED+E +
Sbjct: 185 YAYRAGFINTYVNWQPSALEQIECLEQLRVLWYGEKIHVEVAKEAPAAGVDTPEDLEAVR 244
Query: 287 SFM 289
+ +
Sbjct: 245 AIV 247
>gi|323345485|ref|ZP_08085708.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Prevotella
oralis ATCC 33269]
gi|323093599|gb|EFZ36177.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Prevotella
oralis ATCC 33269]
Length = 247
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 95/246 (38%), Positives = 150/246 (60%), Gaps = 5/246 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR++S+RF GKPL + KP+IQ +ER+ + L++ VATDDE+I +C
Sbjct: 2 KFIGIIPARYSSTRFPGKPLALLGNKPIIQHVYERA--VSALENAYVATDDERIYDCVAS 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG V+MT + ++GT+R EA+ K+ K+D+VVNIQGDEP + I+ +
Sbjct: 60 FGGKVVMTRKDHQSGTDRIAEAIGKIGGKWDVVVNIQGDEPFVRKTQIEVLCHCFDDPTT 119
Query: 169 AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK---SGKVNPQFPYLLHL 225
+ + ++ + N K V+DN+GYA+YFSR +IP+ + +G+ +P+L HL
Sbjct: 120 QIATLGKYFSTMKEVENINSPKIVLDNNGYAMYFSRSIIPFIRGIDAGEWLTFYPFLKHL 179
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKI 285
GI +Y L L + L+ E LEQL+ L+NGYK+KV D E G+D P+D+++
Sbjct: 180 GIYAYKKEVLDEITKLPQSTLEKAESLEQLRWLQNGYKIKVGITDIETVGIDTPDDLKRA 239
Query: 286 ESFMRE 291
F+++
Sbjct: 240 SLFLKQ 245
>gi|224025834|ref|ZP_03644200.1| hypothetical protein BACCOPRO_02576 [Bacteroides coprophilus DSM
18228]
gi|224019070|gb|EEF77068.1| hypothetical protein BACCOPRO_02576 [Bacteroides coprophilus DSM
18228]
Length = 253
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 103/250 (41%), Positives = 147/250 (58%), Gaps = 10/250 (4%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR+AS+RF KPL + GKP+IQR +E ++A LD + VATDDE+I +
Sbjct: 2 KFIGIIPARYASTRFPAKPLALLGGKPVIQRVYE--QVAGVLDEVWVATDDERIEAVVKD 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG V+MTS ++GT+RC EA K+ D++VNIQGDEP I ++ +KA
Sbjct: 60 FGGQVVMTSVHHKSGTDRCYEAYCKVNSSCDVIVNIQGDEPFIHRSQLEA-IKACFDDDA 118
Query: 169 AVFSTAVTSLKPEDAFDP----NRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP---Y 221
+T V P D F+ N K VV+ A+YFSR +IPY ++ Y
Sbjct: 119 TQIATLVKPFVPGDGFEALENVNSPKVVVNRQMQALYFSRSIIPYQRNRDKKEWLAGHTY 178
Query: 222 LLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPED 281
H+G+ +Y + LK L + L+L E LEQL+ LENGY +KV + E G+D P+D
Sbjct: 179 YKHIGLYAYRAAVLKEITALPQSSLELAESLEQLRWLENGYTIKVGISEVETIGIDTPQD 238
Query: 282 VEKIESFMRE 291
+E+ E+F+RE
Sbjct: 239 LERAEAFLRE 248
>gi|170719185|ref|YP_001784328.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Haemophilus somnus
2336]
gi|238688014|sp|B0UT79.1|KDSB_HAES2 RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|168827314|gb|ACA32685.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Haemophilus
somnus 2336]
Length = 256
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 105/249 (42%), Positives = 146/249 (58%), Gaps = 13/249 (5%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR+ASSR GKPL +I GKPMIQ WE+++ + +VVATD E++A + F +
Sbjct: 6 IIPARYASSRLPGKPLADIAGKPMIQHVWEKAQ-QSGATRVVVATDYEEVARAVRGFDGE 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS +GTER E ++KL D I+VNIQGDEPLI P I+ V + LQ +
Sbjct: 65 VCMTSSQHNSGTERLAEVIEKLAVPDDEIIVNIQGDEPLIPPVIVSQVAQNLQKYQVNMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS----------GKVNPQFPY 221
+ AV E+ F+PN VK + D GY +YFSR +IP+++ ++ Y
Sbjct: 125 TLAVKIEDVEELFNPNVVKVLTDKDGYVLYFSRAVIPWDRDQFVQLGKADLSQLQLHQHY 184
Query: 222 LLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPE 280
H+GI +Y + F+K Y PT L+ E LEQL+VL NG ++ V + A GVD E
Sbjct: 185 FRHIGIYAYRAGFIKQYVQWQPTTLEQIERLEQLRVLWNGERIHVELAKQAPAVGVDTVE 244
Query: 281 DVEKIESFM 289
D+EK+ S +
Sbjct: 245 DLEKVRSIL 253
>gi|401680374|ref|ZP_10812294.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Veillonella sp.
ACP1]
gi|400218699|gb|EJO49574.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Veillonella sp.
ACP1]
Length = 243
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 96/240 (40%), Positives = 142/240 (59%), Gaps = 5/240 (2%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPARF S+R GKPL +I GKPMIQR +ER A ++VATDD+++ + + FG
Sbjct: 6 VIPARFGSTRLPGKPLADIAGKPMIQRVYERVTQAKKPQVVIVATDDQRVYDAVKSFGGT 65
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFS 172
V+MT + GT+R E Q+ D+++N+QGDEP+I+ +ID + + + +
Sbjct: 66 VVMTDANHPTGTDRLAEVAQQY-TDLDVIINVQGDEPMIDAHLIDQLGELFEDDAHLQMA 124
Query: 173 TAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDS 232
T T L E+ +P+ VK +++ A+YFSR LIPY + VN L H+GI +Y
Sbjct: 125 TVATPLLKEEYDEPSAVKVILNKRNDAMYFSRSLIPYPRHDFVNAP---LKHIGIYAYRR 181
Query: 233 NFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKI-ESFMRE 291
FL Y + PT + E LEQL+ LENG+ ++VI D GVD PED+ ++ E F +E
Sbjct: 182 QFLLDYAKMEPTAAEQTESLEQLRALENGFSIRVITTDKRFVGVDTPEDLARVNEIFEQE 241
>gi|262191315|ref|ZP_06049508.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio cholerae CT
5369-93]
gi|262032811|gb|EEY51356.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio cholerae CT
5369-93]
Length = 252
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 105/247 (42%), Positives = 148/247 (59%), Gaps = 9/247 (3%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ S+R GKPL +I GKPMIQ +E++ A D +++ATDDE++ + Q FG
Sbjct: 6 VIPARYQSTRLPGKPLADIGGKPMIQWVYEQAMQAGA-DRVIIATDDERVEQAVQAFGGV 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS + ++GTER E + K+ D IVVN+QGDEPLI P II V L A +
Sbjct: 65 VCMTSPNHQSGTERLAEVVAKMVIPADHIVVNVQGDEPLIPPAIIRQVADNLAACSAPMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYN-----KSGKVNPQFPYLLHLG 226
+ AV + F+PN VK + D GYA+YFSR IP++ K+ K Q P L H+G
Sbjct: 125 TLAVEIEDEAEVFNPNAVKVITDKSGYALYFSRATIPWDRDNFAKADKAIVQ-PLLRHIG 183
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKI 285
I +Y + F+ Y P+ L+ E LEQL+VL +G K+ V + ++ GVD PED+E +
Sbjct: 184 IYAYRAGFINTYLDWQPSQLEKIECLEQLRVLWHGEKIHVAVALEAPPAGVDTPEDLEVV 243
Query: 286 ESFMRER 292
+ ER
Sbjct: 244 RRIVAER 250
>gi|303230171|ref|ZP_07316939.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Veillonella
atypica ACS-134-V-Col7a]
gi|429760312|ref|ZP_19292792.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Veillonella
atypica KON]
gi|302515097|gb|EFL57071.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Veillonella
atypica ACS-134-V-Col7a]
gi|429177646|gb|EKY18954.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Veillonella
atypica KON]
Length = 243
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 96/240 (40%), Positives = 142/240 (59%), Gaps = 5/240 (2%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPARF S+R GKPL +I GKPMIQR +ER A ++VATDD+++ + + FG
Sbjct: 6 VIPARFGSTRLPGKPLADIAGKPMIQRVYERVTQAKRPQVVIVATDDQRVYDAVKSFGGT 65
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFS 172
V+MT + GT+R E Q+ D+++N+QGDEP+I+ +ID + + + +
Sbjct: 66 VVMTDANHPTGTDRLAEVAQQY-TDLDVIINVQGDEPMIDAHLIDQLGELFEDDAHLQMA 124
Query: 173 TAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDS 232
T T L E+ +P+ VK +++ A+YFSR LIPY + VN L H+GI +Y
Sbjct: 125 TVATPLLKEEYDEPSAVKVILNKRNDAMYFSRSLIPYPRHDFVNAP---LKHIGIYAYRR 181
Query: 233 NFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKI-ESFMRE 291
FL Y + PT + E LEQL+ LENG+ ++VI D GVD PED+ ++ E F +E
Sbjct: 182 QFLLDYAKMEPTAAEQTESLEQLRALENGFSIRVITTDKRFVGVDTPEDLARVNEIFEQE 241
>gi|262165987|ref|ZP_06033724.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio mimicus
VM223]
gi|262025703|gb|EEY44371.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio mimicus
VM223]
Length = 251
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 105/249 (42%), Positives = 153/249 (61%), Gaps = 11/249 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ S+R GKPL +I GKPMIQ +E++ A D +++ATDD+++ + Q FG
Sbjct: 6 VIPARYQSTRLPGKPLADIGGKPMIQWVYEQAMQAGA-DRVIIATDDQRVEQAVQAFGGV 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS ++GTER E ++K+ D IVVN+QGDEPLI P II V L A +
Sbjct: 65 VCMTSPDHQSGTERLAEVVEKMAIPADHIVVNVQGDEPLIPPVIIRQVADNLAACSAPMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS--GKVNPQF--PYLLHLGI 227
+ AV + F+PN VK + D +GYA+YFSR IP+++ KV+ P L H+GI
Sbjct: 125 TLAVEIEDEAEVFNPNAVKVITDKNGYALYFSRATIPWDRDNFAKVDKSIAQPLLRHIGI 184
Query: 228 QSYDSNFLKIYPGLHPTPLQLE--EDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
+Y + F+ Y LH P QLE E LEQL+VL +G K+ V + ++ GVD PED++
Sbjct: 185 YAYRAGFINTY--LHWQPSQLEKIECLEQLRVLWHGEKIHVAVALEAPPAGVDTPEDLQV 242
Query: 285 IESFMRERN 293
+ F+ +++
Sbjct: 243 VRQFIAKQH 251
>gi|343494811|ref|ZP_08733039.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio
nigripulchritudo ATCC 27043]
gi|342824765|gb|EGU59299.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio
nigripulchritudo ATCC 27043]
Length = 249
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 101/244 (41%), Positives = 152/244 (62%), Gaps = 9/244 (3%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ S+R GKPL +I GKPMI+ ++++ + D +++ATDDE++ ++FGA
Sbjct: 6 VIPARYQSTRLPGKPLADIAGKPMIEWVYQQA-IQAGADQVIIATDDERVKNAAERFGAQ 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS +GTER E ++K++ D +VVN+QGDEPLI P II V + L+ + DA
Sbjct: 65 VCMTSNKHESGTERLAEVVEKMQIPADHVVVNVQGDEPLIPPSIITQVAENLKMS-DAPM 123
Query: 172 STAVTSLKPE-DAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS--GKVNPQF--PYLLHLG 226
+T ++ E + F+PN VK V D +GYA+YFSR IP+++ K +P P H+G
Sbjct: 124 ATLSVEIEDESEVFNPNAVKVVTDQNGYALYFSRASIPWDRDDFSKESPSIRQPLQRHIG 183
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKI 285
I +Y + F+K Y P+ L+ E LEQL+VL G K+ V + + A GVD PED+E +
Sbjct: 184 IYAYRAGFIKTYVEWEPSALERIECLEQLRVLWYGEKIHVAVAKETPAAGVDTPEDLEVV 243
Query: 286 ESFM 289
+
Sbjct: 244 RKLL 247
>gi|254476519|ref|ZP_05089905.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Ruegeria sp.
R11]
gi|214030762|gb|EEB71597.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Ruegeria sp.
R11]
Length = 266
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 104/261 (39%), Positives = 149/261 (57%), Gaps = 20/261 (7%)
Query: 50 VVGIIPARFASSRFEGKPLVNILGK-----PMIQRTWERSKLATTLDHLVVATDDEKIAE 104
V+ +IPAR+AS+R+ GKPLV++ G +I+R+W + T +D +VVATDD++I
Sbjct: 3 VLIVIPARYASTRYPGKPLVSLTGADGDSLTLIERSWRAAMAVTGVDRVVVATDDDRIRT 62
Query: 105 CCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQ 164
+ FGA+V+MTSESC NGTERC EAL L YDIVVN+QGD PL ++ +V L+
Sbjct: 63 AAEGFGAEVVMTSESCANGTERCAEALANLGGGYDIVVNLQGDAPLTPHWFVEDLVNGLR 122
Query: 165 AAPDAVFSTAV---------TSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS--G 213
APD +T V + L A V A+YFS+ ++P+ + G
Sbjct: 123 GAPDKGLATPVLRCEGAMLNSLLADRKAGRVGGTTAVFGRDNNALYFSKEVVPFTSATYG 182
Query: 214 KVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVD--- 270
P P H+G+ +Y + L YPG PL+ E LEQL+ LENG K+ ++V+
Sbjct: 183 DDEPT-PVFHHVGVYAYRPDALAAYPGWPVGPLETLEGLEQLRFLENGRKILCVEVEAKG 241
Query: 271 HEAHGVDAPEDVEKIESFMRE 291
E ++ PEDV IE+ MR+
Sbjct: 242 REFWELNNPEDVPVIEAMMRK 262
>gi|88860179|ref|ZP_01134818.1| CTP:CMP-3-deoxy-D-manno-octulosonate transferase [Pseudoalteromonas
tunicata D2]
gi|88818173|gb|EAR27989.1| CTP:CMP-3-deoxy-D-manno-octulosonate transferase [Pseudoalteromonas
tunicata D2]
Length = 253
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 107/252 (42%), Positives = 154/252 (61%), Gaps = 15/252 (5%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPAR+AS+R KPL +I GKPMIQ +E++ + + ++V+ATD + + E CQ+F
Sbjct: 4 VVIIPARYASTRLPAKPLADIAGKPMIQHVFEKA-MQSGATNVVIATDHQAVFEACQKFT 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKAL--QAAP 167
V+MT +S +GTER E ++ L IVVN+QGDEPL+ PE + V + L AP
Sbjct: 63 TQVLMTKDSHESGTERLAEVVELLNLSDETIVVNVQGDEPLLAPENVSQVAQLLAQSTAP 122
Query: 168 DAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP------Y 221
A S A+ S+ E+A +PN VK V D A+YFSR IPY++ +N + Y
Sbjct: 123 MATLSVAIDSV--EEALNPNAVKVVSDKFANALYFSRATIPYDRERFLNKEVVEEIGDFY 180
Query: 222 LLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV--IKVDHEAHGVDAP 279
H+GI +Y + F+K Y L P+PL+ E LEQL+VL +G +KV KV EA GVD
Sbjct: 181 QRHVGIYAYRAGFIKEYIQLSPSPLEKIEALEQLRVLYHGRSIKVEQAKVVPEA-GVDTI 239
Query: 280 EDVEKIESFMRE 291
ED+E++ + ++
Sbjct: 240 EDLERVRAVFKQ 251
>gi|427382597|ref|ZP_18879317.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bacteroides
oleiciplenus YIT 12058]
gi|425729842|gb|EKU92693.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bacteroides
oleiciplenus YIT 12058]
Length = 250
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 101/249 (40%), Positives = 149/249 (59%), Gaps = 10/249 (4%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR+AS+RF KPL + GK +IQR +E+ +A L+ VATDDE+I +
Sbjct: 3 KFLGIIPARYASTRFPAKPLAMLDGKTVIQRVYEQ--VAGVLNDAYVATDDERIEAVVKA 60
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG V+MTS + ++GT+RC EA K+ +DIVVNIQGDEP I+P ++ VKA
Sbjct: 61 FGGKVVMTSVNHKSGTDRCYEAYTKIGGDFDIVVNIQGDEPFIQPSQLEA-VKACFDDVT 119
Query: 169 AVFSTAVTSLKPEDAFDP----NRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF---PY 221
+T V P++ F+ N K V++ + A+YFSR +IPY ++ + Y
Sbjct: 120 TQIATLVKPFMPDNGFEALENINSPKVVLNKNMNALYFSRSIIPYQRNAEKQDWLKNHTY 179
Query: 222 LLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPED 281
H+G+ +Y + LK L + L+L E LEQL+ LENGY +K + E G+D P+D
Sbjct: 180 YKHIGLYAYRAGVLKEITSLPQSSLELAESLEQLRWLENGYTIKAGVTEVETIGIDTPQD 239
Query: 282 VEKIESFMR 290
+EK E F++
Sbjct: 240 LEKAEEFLK 248
>gi|289624524|ref|ZP_06457478.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
syringae pv. aesculi str. NCPPB 3681]
gi|289649336|ref|ZP_06480679.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
syringae pv. aesculi str. 2250]
gi|422584466|ref|ZP_16659574.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
syringae pv. aesculi str. 0893_23]
gi|330869281|gb|EGH03990.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
syringae pv. aesculi str. 0893_23]
Length = 254
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 100/246 (40%), Positives = 144/246 (58%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ SSRF GKPL I GKPM+Q WE++ ++ + +V+ATDD +I E CQ FGA+
Sbjct: 8 VIPARYGSSRFPGKPLKTIAGKPMVQLVWEQA-CKSSAERVVIATDDARIVEACQAFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V++T E +GT+R E +L D IVVN+QGDEP+I P +ID V L A P+A
Sbjct: 67 VLLTREDHNSGTDRLAEVAAQLGLAADAIVVNVQGDEPMIPPAVIDQVASNLAAHPEAGM 126
Query: 172 STAVTSLKPEDA-FDPNRVKCVVDNHGYAIYFSRGLIPYNKSG------KVNPQFPYLLH 224
ST + A F+PN VK D +G A+ FSR +P+ + ++ PY H
Sbjct: 127 STLAEPIDDVAALFNPNIVKVATDINGLALTFSRAPLPWARDALTANRDELPAGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDAPEDVE 283
+GI +Y + FL + P L+ E LEQL+ L NG ++ V ++ GVD PED+E
Sbjct: 187 IGIYAYRAGFLHDFVSWGPCWLENTESLEQLRALWNGVRIHVADALEAPPGGVDTPEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|237800336|ref|ZP_04588797.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
syringae pv. oryzae str. 1_6]
gi|331023193|gb|EGI03250.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
syringae pv. oryzae str. 1_6]
Length = 254
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 99/246 (40%), Positives = 145/246 (58%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ SSRF GKPL I GKPM+Q WE+++ ++ + +VVATDD +I E C+ FGA+
Sbjct: 8 VIPARYGSSRFPGKPLQTIAGKPMVQLVWEQAR-KSSAERVVVATDDARIVEACRAFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V++T E +GT+R E +L D IVVN+QGDEP+I P +ID V L A P+A
Sbjct: 67 VLLTREDHNSGTDRLAEVATQLGLAADAIVVNVQGDEPMIPPAVIDQVAANLAAHPEAGM 126
Query: 172 STAVTSLKPEDA-FDPNRVKCVVDNHGYAIYFSRGLIPYNKSG------KVNPQFPYLLH 224
+T + A F+PN VK D +G A+ FSR +P+ + ++ PY H
Sbjct: 127 ATLAEPIDDVAALFNPNIVKVSTDINGLALTFSRAPLPWARDALASDKDRLPAGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDAPEDVE 283
+GI +Y + FL + P L+ E LEQL+ L NG ++ V ++ GVD PED+E
Sbjct: 187 IGIYAYRAGFLHDFVSWGPCWLENTESLEQLRALWNGVRIHVADALEAPPGGVDTPEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|374298519|ref|YP_005050158.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Desulfovibrio
africanus str. Walvis Bay]
gi|332551455|gb|EGJ48499.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Desulfovibrio
africanus str. Walvis Bay]
Length = 253
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 100/247 (40%), Positives = 147/247 (59%), Gaps = 13/247 (5%)
Query: 52 GIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGA 111
GIIPAR+ASSRF GKPL ILG+PM+ R++L L +V+ATDDE+IA+ C +
Sbjct: 8 GIIPARYASSRFPGKPLAPILGRPMLWHVHTRARLCPELARVVLATDDERIAQACAELDI 67
Query: 112 DVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAV 170
+MTS S +GT+R EA L + +VVNIQGDEP +EP ++ +V AP
Sbjct: 68 PAVMTSGSHESGTDRVLEAATILGVPDEAVVVNIQGDEPALEPAMLSALV-----APFVD 122
Query: 171 FSTAVTSL----KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLG 226
+ VT+L E A PN+VK + G A+YFSR IP+ + N Q Y H+G
Sbjct: 123 ETVRVTTLAKEISAERAASPNQVKVAIAKDGRALYFSRATIPFPRD---NAQATYFGHIG 179
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIE 286
+ ++ L+ + L P+PL+ E LEQL++LE G ++V+ ++ GVD+PED+++ E
Sbjct: 180 LYAFRMETLRRFAELGPSPLECREKLEQLRLLEAGIPIRVVLTTFDSCGVDSPEDIQRAE 239
Query: 287 SFMRERN 293
+ E+
Sbjct: 240 RILTEKT 246
>gi|71735773|ref|YP_273873.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
syringae pv. phaseolicola 1448A]
gi|257487564|ref|ZP_05641605.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
syringae pv. tabaci str. ATCC 11528]
gi|416015322|ref|ZP_11562935.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
syringae pv. glycinea str. B076]
gi|416028273|ref|ZP_11571329.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
syringae pv. glycinea str. race 4]
gi|422404565|ref|ZP_16481617.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
syringae pv. glycinea str. race 4]
gi|422595276|ref|ZP_16669564.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
syringae pv. lachrymans str. M301315]
gi|422607846|ref|ZP_16679840.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
syringae pv. mori str. 301020]
gi|422683285|ref|ZP_16741546.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
syringae pv. tabaci str. ATCC 11528]
gi|123637343|sp|Q48L52.1|KDSB_PSE14 RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|71556326|gb|AAZ35537.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas
syringae pv. phaseolicola 1448A]
gi|320325300|gb|EFW81367.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
syringae pv. glycinea str. B076]
gi|320327715|gb|EFW83723.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
syringae pv. glycinea str. race 4]
gi|330877778|gb|EGH11927.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
syringae pv. glycinea str. race 4]
gi|330891482|gb|EGH24143.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
syringae pv. mori str. 301020]
gi|330985581|gb|EGH83684.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
syringae pv. lachrymans str. M301315]
gi|331012620|gb|EGH92676.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
syringae pv. tabaci str. ATCC 11528]
Length = 254
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 100/246 (40%), Positives = 144/246 (58%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ SSRF GKPL I GKPM+Q WE++ ++ + +V+ATDD +I E CQ FGA+
Sbjct: 8 VIPARYGSSRFPGKPLKTIAGKPMVQLVWEQA-CKSSAERVVIATDDARIVEACQAFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V++T E +GT+R E +L D IVVN+QGDEP+I P +ID V L A P+A
Sbjct: 67 VLLTREDHNSGTDRLAEVAAQLGLAADAIVVNVQGDEPMIPPAVIDQVASNLAAHPEAGM 126
Query: 172 STAVTSLKPEDA-FDPNRVKCVVDNHGYAIYFSRGLIPYNKSG------KVNPQFPYLLH 224
ST + A F+PN VK D +G A+ FSR +P+ + ++ PY H
Sbjct: 127 STLAEPIDDVAALFNPNIVKVATDINGLALTFSRAPLPWARDALAANRDELPAGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDAPEDVE 283
+GI +Y + FL + P L+ E LEQL+ L NG ++ V ++ GVD PED+E
Sbjct: 187 IGIYAYRAGFLHDFVSWGPCWLENTESLEQLRALWNGVRIHVADALEAPPGGVDTPEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|153830804|ref|ZP_01983471.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio cholerae
623-39]
gi|148873711|gb|EDL71846.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio cholerae
623-39]
Length = 252
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 107/248 (43%), Positives = 152/248 (61%), Gaps = 11/248 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ S+R GKPL +I GKPMIQ +E++ A D +++ATDDE++ + Q FG
Sbjct: 6 VIPARYQSTRLPGKPLADIGGKPMIQWVYEQAMQAGA-DRVIIATDDERVEQAVQAFGGV 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS + ++GTER E + K+ D IVVN+QGDEPLI P II V L AA A
Sbjct: 65 VCMTSPNHQSGTERLAEVVAKMAIPADHIVVNVQGDEPLIPPAIIRQVADNL-AACSAPM 123
Query: 172 STAVTSLKPE-DAFDPNRVKCVVDNHGYAIYFSRGLIPYN-----KSGKVNPQFPYLLHL 225
+T ++ E + F+PN VK + D +GYA+YFSR IP++ K+ K Q P L H+
Sbjct: 124 ATLTVEIEDEAEVFNPNAVKVITDKNGYALYFSRATIPWDRDNFAKADKAIVQ-PLLRHI 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI +Y + F+ Y P+ L+ E LEQL+VL +G K+ V + ++ GVD PED+E
Sbjct: 183 GIYAYRAGFINTYLDWQPSQLEKIECLEQLRVLWHGEKIHVAVALEAPPAGVDTPEDLEV 242
Query: 285 IESFMRER 292
+ + ER
Sbjct: 243 VRRIVAER 250
>gi|417825095|ref|ZP_12471683.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HE48]
gi|340046580|gb|EGR07510.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HE48]
Length = 252
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 105/247 (42%), Positives = 149/247 (60%), Gaps = 9/247 (3%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ S+R GKPL +I GKPMIQ +E++ A D +++ATDDE++ + Q FG
Sbjct: 6 VIPARYQSTRLPGKPLADIGGKPMIQWVYEQAMQAGA-DRVIIATDDERVEQAVQAFGGV 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS + ++GTER E + K+ D IVVN+QGDEPLI P II V L A +
Sbjct: 65 VCMTSPNHQSGTERLAEVVAKMVIPADHIVVNVQGDEPLIPPAIIRQVADNLAACNAPMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYN-----KSGKVNPQFPYLLHLG 226
+ AV + F+PN VK + D +GYA+YFSR IP++ K+ K Q P L H+G
Sbjct: 125 TLAVEIEDEAEVFNPNAVKVITDKNGYALYFSRATIPWDRDNFAKADKAIVQ-PLLRHIG 183
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKI 285
I +Y + F+ Y P+ L+ E LEQL+VL +G K+ V + ++ GVD PED+E +
Sbjct: 184 IYAYRAGFINTYLDWQPSQLEKIECLEQLRVLWHGEKIHVAVALEAPPAGVDTPEDLEVV 243
Query: 286 ESFMRER 292
+ ER
Sbjct: 244 RRIVAER 250
>gi|357419398|ref|YP_004932390.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Thermovirga
lienii DSM 17291]
gi|355396864|gb|AER66293.1| 3-deoxy-D-manno-octulosonatecytidylyltransferase [Thermovirga
lienii DSM 17291]
Length = 247
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 98/244 (40%), Positives = 149/244 (61%), Gaps = 6/244 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
R + +IPAR+ S+R GKPLV I G P++ R ++K + LD ++VATDDE+IAE ++
Sbjct: 2 RTLAVIPARYHSTRLPGKPLVEIAGIPLVIRVLRQAKRCSLLDRVIVATDDERIAEVVRK 61
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
+V+MT +G +R ++ +E D+V+NIQ D+PL+ P++I +V+AL D
Sbjct: 62 DKGEVMMTPPDLPSGGDRVAWVVKCVEDA-DVVLNIQVDDPLVGPKMIGSLVEALAQDED 120
Query: 169 AVFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+ AV + KPE+ DPN VK V D + A+YFSR +IPY + + Y H+G
Sbjct: 121 CDLAVAVKEIEKPEEVEDPNIVKVVFDQYFKALYFSRSVIPYPRVKGAS----YYKHIGP 176
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
+Y FL + PTPL+ E LE L+VLE G K+K + V+ + +D PEDVE++E+
Sbjct: 177 YAYRRPFLLEFASWEPTPLERSESLEMLRVLERGRKIKCVPVESDTIEIDTPEDVERLEA 236
Query: 288 FMRE 291
+ RE
Sbjct: 237 YFRE 240
>gi|167032488|ref|YP_001667719.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas putida
GB-1]
gi|189028710|sp|B0KF43.1|KDSB_PSEPG RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|166858976|gb|ABY97383.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas
putida GB-1]
Length = 254
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 102/246 (41%), Positives = 145/246 (58%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR S+R GKPL+ I GKPM+Q WE+++ + +V+ATDD I E CQ FGA+
Sbjct: 8 VIPARLRSTRLPGKPLLPIAGKPMVQHVWEQARRSGA-SRVVIATDDASILEACQAFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V+MT +GT+R E + L D IVVN+QGDEPLI P IID V L A P+A
Sbjct: 67 VLMTRADHESGTDRLAEVVAHLGLPADAIVVNVQGDEPLIPPVIIDQVAANLAAHPEAGI 126
Query: 172 STAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSG-----KVNPQ-FPYLLH 224
+T + +PE F+PN VK V D +G A+ FSR +P+ + V P+ PY H
Sbjct: 127 ATLAEPIHEPETVFNPNAVKVVSDKNGLALTFSRAPLPWARDAFAKDRNVLPEGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVE 283
+G+ +Y FL+ + P L+ E LEQL+ L +G ++ V ++ A GVD PED+E
Sbjct: 187 IGMYAYRVGFLQDFVSWGPCWLEQTEALEQLRALWHGVRIHVEDAIEAPAVGVDTPEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|288925836|ref|ZP_06419767.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Prevotella
buccae D17]
gi|288337491|gb|EFC75846.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Prevotella
buccae D17]
Length = 243
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 148/244 (60%), Gaps = 5/244 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR+AS+RF GKPL + GK +IQR +E+ K LD + VATDD +I +
Sbjct: 2 KFIGIIPARYASTRFPGKPLAMLGGKSVIQRVYEQVK--DVLDDVYVATDDRRIFDMVLS 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
F V+MTS S ++GT+R EA++K+ +D++VN+QGDEP I+ ++ V +
Sbjct: 60 FEGKVVMTSSSHQSGTDRIAEAIEKIGGDWDVIVNVQGDEPFIQRAQVETVCHCFEDEST 119
Query: 169 AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVN---PQFPYLLHL 225
+ + E + N K VVDN G+A+YFSR +IP+ ++ + N +FP+L H+
Sbjct: 120 QIATLGKPFATMEAVRNVNSPKIVVDNQGFAMYFSRSVIPFVRNVEENEWIERFPFLKHI 179
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKI 285
G+ +Y L+ L + L+ E LEQL+ L+NGYK+KV D E G+D PED+++
Sbjct: 180 GVYAYRKEVLENITKLPQSSLEKAESLEQLRWLQNGYKIKVGLTDIETVGIDTPEDLKRA 239
Query: 286 ESFM 289
E +
Sbjct: 240 EQLI 243
>gi|375131426|ref|YP_004993526.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio furnissii
NCTC 11218]
gi|315180600|gb|ADT87514.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio furnissii
NCTC 11218]
Length = 247
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 98/242 (40%), Positives = 145/242 (59%), Gaps = 6/242 (2%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ S+R GKPL +I GKPM+Q +E++ A D ++VATDD ++ + FG
Sbjct: 6 VIPARYQSTRLPGKPLADIAGKPMVQWVYEQAMQAGA-DRVIVATDDARVEQAVNAFGGT 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS ++GTER E ++++ + D I+VN+QGDEPLI P II V L A+ +
Sbjct: 65 VCMTSPDHQSGTERLAEVVKRMSIEDDHIIVNVQGDEPLIPPSIIRQVADNLAASQAPMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF---PYLLHLGIQ 228
+ AV E+ F+PN VK V D GYA+YFSR IP+++ N + P + H+GI
Sbjct: 125 TLAVEISDAEEVFNPNAVKVVTDKDGYALYFSRASIPWDRDNFANDKTIVQPLMRHIGIY 184
Query: 229 SYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKIES 287
+Y + F+ Y P+ L+ E LEQL+VL G K+ V + ++ GVD PED+E +
Sbjct: 185 AYRAGFINTYIHWQPSQLEKIESLEQLRVLWYGEKIHVAVALEAPPAGVDTPEDLEAVRR 244
Query: 288 FM 289
+
Sbjct: 245 IV 246
>gi|329959954|ref|ZP_08298470.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Bacteroides
fluxus YIT 12057]
gi|328533195|gb|EGF59962.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Bacteroides
fluxus YIT 12057]
Length = 254
Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 101/253 (39%), Positives = 153/253 (60%), Gaps = 16/253 (6%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR+AS+RF KPL + GK +IQR +E ++A LD VATDDE+I +
Sbjct: 2 KFLGIIPARYASTRFPAKPLAMLGGKTVIQRVYE--QVAGVLDDAYVATDDERIEAAVKA 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG V+MTS + ++GT+RC EA K+ +++VVNIQGDEP I+P + +A++A D
Sbjct: 60 FGGKVVMTSVNHKSGTDRCYEAYTKIGGAFEVVVNIQGDEPFIQPSQL----QAIKACFD 115
Query: 169 AVFSTAVTSLKP---EDAF----DPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF-- 219
+ T +KP ++ F + N K V++ + A+YFSR +IPY ++ +
Sbjct: 116 DSTTQIATLVKPFAADNGFEVLENANSPKVVLNRNMNALYFSRSVIPYQRNAEKKDWLKN 175
Query: 220 -PYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDA 278
Y H+G+ +Y LK L +PL+L E LEQL+ LENGY +K + E G+D
Sbjct: 176 HTYYKHIGLYAYRVEVLKEITSLPQSPLELAESLEQLRWLENGYTIKAGITEVETIGIDT 235
Query: 279 PEDVEKIESFMRE 291
P+D+E+ E F++E
Sbjct: 236 PQDLERAEMFLKE 248
>gi|378774569|ref|YP_005176812.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pasteurella
multocida 36950]
gi|383310540|ref|YP_005363350.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pasteurella
multocida subsp. multocida str. HN06]
gi|425065722|ref|ZP_18468842.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pasteurella
multocida subsp. gallicida P1059]
gi|356597117|gb|AET15843.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pasteurella
multocida 36950]
gi|380871812|gb|AFF24179.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pasteurella
multocida subsp. multocida str. HN06]
gi|404384098|gb|EJZ80543.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pasteurella
multocida subsp. gallicida P1059]
Length = 258
Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 105/251 (41%), Positives = 150/251 (59%), Gaps = 15/251 (5%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR+AS+R GKPL I GKPMI +E++ + + ++VATD E++A + FGA+
Sbjct: 7 IIPARYASTRLPGKPLAEIAGKPMIAHVFEKA-MQSGAKRVIVATDHEQVATVARGFGAE 65
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTSE+ ++GTER E ++KL D I+VNIQGDEPLI P I+ V + L +
Sbjct: 66 VCMTSETHQSGTERLAEVVEKLGIAEDEIIVNIQGDEPLIPPAIVRQVAENLAKYQVKMA 125
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS------------GKVNPQF 219
S AV PE+ F+PN VK + D+ GY +YFSR IP+++ G++
Sbjct: 126 SLAVNITDPEELFNPNAVKVLTDHAGYVLYFSRAPIPWHRDQFASLPKEKSTRGQLVLSD 185
Query: 220 PYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDA 278
YL H+GI +Y + F+K Y P+ L+ E LEQL+VL G K+ V + + GVD
Sbjct: 186 HYLRHIGIYAYRAGFIKQYIQWQPSALEQIESLEQLRVLWYGEKIHVELAREVPPVGVDT 245
Query: 279 PEDVEKIESFM 289
ED+EK+ S +
Sbjct: 246 AEDLEKVRSIL 256
>gi|336311512|ref|ZP_08566475.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Shewanella sp.
HN-41]
gi|335865005|gb|EGM70065.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Shewanella sp.
HN-41]
Length = 245
Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 101/241 (41%), Positives = 143/241 (59%), Gaps = 8/241 (3%)
Query: 50 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQF 109
V +IPAR+ SSRF GKPL I GKPMIQ +ER+ LA L ++ VATDDE+I + F
Sbjct: 3 VTLLIPARYGSSRFPGKPLAPINGKPMIQHVYERASLAKGLTNIYVATDDERIKSAVESF 62
Query: 110 GADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
G V+MTS +GT+R N+A+ +L K D+V+N+QGD+PLI+P I+ V+ + P
Sbjct: 63 GGKVVMTSPEAASGTDRINDAITQLGLKDDDLVINLQGDQPLIDPTSIEQVISLFERHP- 121
Query: 169 AVFSTAVTS---LKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHL 225
F A + + DP VK V DN YA+YFSR IP+ + K +P HL
Sbjct: 122 GEFEMATLGYEIVNKAELDDPMHVKMVFDNDYYALYFSRARIPFGRDTK---DYPVYKHL 178
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKI 285
G+ +Y F++ + L L+ E LEQL+ LE+G+++KV ++ VD PED+ K
Sbjct: 179 GVYAYTRRFVQAFAALPLGRLEDLEKLEQLRALEHGHRIKVAISAFDSIEVDTPEDIRKC 238
Query: 286 E 286
E
Sbjct: 239 E 239
>gi|167762970|ref|ZP_02435097.1| hypothetical protein BACSTE_01334 [Bacteroides stercoris ATCC
43183]
gi|167699310|gb|EDS15889.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Bacteroides
stercoris ATCC 43183]
Length = 252
Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 102/252 (40%), Positives = 149/252 (59%), Gaps = 10/252 (3%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR+AS+RF KPL + GK +IQR +E ++A LD VATDDE+I +
Sbjct: 2 KFLGIIPARYASTRFPAKPLALLGGKTVIQRVYE--QVAGVLDDAYVATDDERIEAAVKA 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG V+MTS ++GT+RC EA K+ + +D+VVNIQGDEP I+P ++ VKA P
Sbjct: 60 FGGKVVMTSVHHKSGTDRCYEACTKVGEGFDVVVNIQGDEPFIQPPQLE-TVKACFDDPS 118
Query: 169 AVFSTAVTSLKPEDAFDP----NRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF---PY 221
+T V ++ F+ N K V++ + A+YFSR +IPY ++ + Y
Sbjct: 119 TQIATLVKPFTADNGFEALENVNSPKVVLNKNMNALYFSRSIIPYQRNAEKWEWLKNHTY 178
Query: 222 LLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPED 281
H+G+ +Y LK L + L+L E LEQL+ LENGY +K + E G+D P+D
Sbjct: 179 YKHIGLYAYRVEVLKEITSLPQSSLELAESLEQLRWLENGYTIKAGITEVETIGIDTPQD 238
Query: 282 VEKIESFMRERN 293
+E E F++ RN
Sbjct: 239 LEHAERFLQARN 250
>gi|242278454|ref|YP_002990583.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Desulfovibrio
salexigens DSM 2638]
gi|242121348|gb|ACS79044.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Desulfovibrio
salexigens DSM 2638]
Length = 247
Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 102/244 (41%), Positives = 144/244 (59%), Gaps = 9/244 (3%)
Query: 52 GIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGA 111
GIIPAR+ SSRF GKPL +I GKPM W R+ +D +V+ATD E I E ++ G
Sbjct: 9 GIIPARYDSSRFPGKPLADICGKPMFWHVWNRASKCPEMDKVVLATDSEIIMEAAEKHGV 68
Query: 112 DVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAV 170
+MT +GT+R EA +KL+ D +VVNIQGDEP +EP +I +V A D V
Sbjct: 69 PAVMTRSDHTSGTDRVLEAARKLDLPSDSVVVNIQGDEPCLEPAMISELVSPF--AKDGV 126
Query: 171 FSTAVTS-LKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQS 229
T + S + ++A P+RVK + G A+YFSR IP++ G + YLLH+G+
Sbjct: 127 RVTTLASPISADEAQSPDRVKVALAKDGRALYFSRSPIPFSHQGDGD----YLLHIGLYG 182
Query: 230 YDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEK-IESF 288
+ L+ + G +PL+ E LEQL++LENG + V +H HGVD PED++ I+
Sbjct: 183 FRMEALETFAGTDVSPLEKRERLEQLRLLENGIPIHVTITEHSCHGVDRPEDLDTAIKIL 242
Query: 289 MRER 292
RE+
Sbjct: 243 EREK 246
>gi|419834023|ref|ZP_14357478.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-61A2]
gi|408648845|gb|EKL20162.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HC-61A2]
Length = 247
Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 104/247 (42%), Positives = 150/247 (60%), Gaps = 9/247 (3%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ S+R GKPL +I GKPMIQ +E++ A D +++ATDDE++ + Q FG
Sbjct: 1 MIPARYQSTRLPGKPLADIGGKPMIQWVYEQAMQAGA-DRVIIATDDERVEQAVQAFGGV 59
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS + ++GTER E + K+ D IVVN+QGDEPLI P II V L A +
Sbjct: 60 VCMTSPNHQSGTERLAEVVAKMAIPADHIVVNVQGDEPLIPPAIIRQVADNLAACSAPMA 119
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYN-----KSGKVNPQFPYLLHLG 226
+ AV + F+PN VK + D +GYA+YFSR IP++ K+ K Q P L H+G
Sbjct: 120 TLAVEIEDEAEVFNPNAVKVITDKNGYALYFSRATIPWDRDNFAKADKAIVQ-PLLRHIG 178
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKI 285
I +Y + F+ Y P+ L+ E LEQL+VL +G K+ V + ++ GVD PED++ +
Sbjct: 179 IYAYRAGFINTYLDWQPSQLEKIECLEQLRVLWHGEKIHVAVALEAPPAGVDTPEDLKVV 238
Query: 286 ESFMRER 292
+ + ER
Sbjct: 239 QRIVAER 245
>gi|317153982|ref|YP_004122030.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Desulfovibrio
aespoeensis Aspo-2]
gi|316944233|gb|ADU63284.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Desulfovibrio
aespoeensis Aspo-2]
Length = 246
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 95/239 (39%), Positives = 144/239 (60%), Gaps = 5/239 (2%)
Query: 52 GIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGA 111
GIIPAR+ SSRF GKPLV I G+PM R+ L + +ATDD +I + ++
Sbjct: 9 GIIPARYESSRFPGKPLVEIKGRPMFWHVHNRASRCPQLGSVTLATDDARIFDAARRLDV 68
Query: 112 DVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAV 170
V+MT ++GT+R EA Q L D +VVNIQGDEP +EPE++ ++ + +P
Sbjct: 69 PVVMTGSHHQSGTDRVLEAAQLLGIAPDAVVVNIQGDEPCLEPEMLTELLTPFR-SPGVR 127
Query: 171 FSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSY 230
+T T + P+ A P+RVK V +G A+YFSR ++PY++ YLLH+G+ ++
Sbjct: 128 VATLATPIGPDKAGSPDRVKVVRARNGRALYFSRAVVPYDRDAAPG---GYLLHIGLYAF 184
Query: 231 DSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFM 289
L+ + L P+PL+L E LEQL++LE+G + V + H HGVD P+D+E ++ +
Sbjct: 185 RMEALRRFGQLEPSPLELREKLEQLRLLEDGMDIYVTETRHACHGVDRPDDLEIVKHIL 243
>gi|113460803|ref|YP_718870.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Haemophilus somnus
129PT]
gi|123327236|sp|Q0I2X5.1|KDSB_HAES1 RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|112822846|gb|ABI24935.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Haemophilus somnus
129PT]
Length = 256
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 104/249 (41%), Positives = 146/249 (58%), Gaps = 13/249 (5%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR+ASSR GKPL +I GKPMIQ WE+++ + +VVATD E++A + F +
Sbjct: 6 IIPARYASSRLPGKPLADIAGKPMIQHVWEKAQ-QSGATRVVVATDYEEVARAVRGFDGE 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS +GTER E ++KL D I+VNIQGDEPL+ P I+ V + LQ +
Sbjct: 65 VCMTSSQHNSGTERLAEVIEKLAIPDDEIIVNIQGDEPLVPPVIVSQVAQNLQKYQVNMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS----------GKVNPQFPY 221
+ AV E+ F+PN VK + D GY +YFSR +IP+++ ++ Y
Sbjct: 125 TLAVKIEDVEELFNPNVVKVLTDKDGYVLYFSRAVIPWDRDQFVQLGKADLSQLQLHQHY 184
Query: 222 LLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPE 280
H+GI +Y + F+K Y PT L+ E LEQL+VL NG ++ V + A GVD E
Sbjct: 185 FRHIGIYAYRAGFIKQYVQWQPTTLEQIERLEQLRVLWNGERIHVELAKQAPAVGVDTVE 244
Query: 281 DVEKIESFM 289
D+EK+ S +
Sbjct: 245 DLEKVRSIL 253
>gi|34498799|ref|NP_903014.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chromobacterium
violaceum ATCC 12472]
gi|81654799|sp|Q7NSS6.1|KDSB_CHRVO RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|34104651|gb|AAQ61008.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chromobacterium
violaceum ATCC 12472]
Length = 251
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 101/245 (41%), Positives = 136/245 (55%), Gaps = 9/245 (3%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR ASSR GKPL +I GKPM+ R E++ + +VVATD I C G +
Sbjct: 7 VIPARMASSRLPGKPLADIAGKPMVVRVAEQAA-KSRAARVVVATDHADILAACAAHGVE 65
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
++T E +GT+R E KL D +VVN+QGDEPLI+PE+I+ + + L A V
Sbjct: 66 AVLTREDHASGTDRLAEVAAKLALPDDALVVNVQGDEPLIQPELINRLAELLAGADAPVA 125
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ------FPYLLHL 225
+ A D F+PN VK +D HG A+YFSR IPY + + P H+
Sbjct: 126 TLAHALHDAADHFNPNVVKVALDKHGRALYFSRAPIPYARDAYAADRSALPAGLPVYRHI 185
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHE-AHGVDAPEDVEK 284
G+ Y + FL Y GL P PL+ E LEQL+VL +GY + V D A GVD PED+E+
Sbjct: 186 GMYGYRAGFLAAYAGLEPGPLEQYEALEQLRVLWHGYGIAVALADEAPAAGVDTPEDLER 245
Query: 285 IESFM 289
+
Sbjct: 246 VRRLF 250
>gi|336398236|ref|ZP_08579036.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Prevotella
multisaccharivorax DSM 17128]
gi|336067972|gb|EGN56606.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Prevotella
multisaccharivorax DSM 17128]
Length = 249
Score = 181 bits (458), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 96/248 (38%), Positives = 150/248 (60%), Gaps = 15/248 (6%)
Query: 50 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQF 109
++ IIPARFAS+RF GKPL + GKP+I+ +E +++ L + VATD+ +I + F
Sbjct: 3 IIAIIPARFASTRFPGKPLAMLAGKPVIEHVYE--QVSQVLSEVWVATDNSRIYDAVIAF 60
Query: 110 GADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
G +MT ++GT+R EA +K+ K D++VN+QGDEP I+P I+ +
Sbjct: 61 GGKAVMTRADHKSGTDRIEEAAEKINSKADVIVNVQGDEPFIQPSQIETLCGLFDNP--- 117
Query: 170 VFSTAVTSL-KPEDAFDP----NRVKCVVDNHGYAIYFSRGLIPYNKSGKVN---PQFPY 221
+T + +L KP D+ D N K V DN+G+A+YFSR +IP+ + + + QFP+
Sbjct: 118 --TTQIATLGKPFDSMDAVRNSNSPKIVTDNNGFALYFSRSVIPFVRGKEPDTWLTQFPF 175
Query: 222 LLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPED 281
L HLGI +Y L+ L + L+ E LEQL+ L+NGY+++V + E G+D PED
Sbjct: 176 LKHLGIYAYRREVLREVTSLPMSTLEKAESLEQLRWLQNGYRIRVGITNVETVGIDTPED 235
Query: 282 VEKIESFM 289
+++ E F+
Sbjct: 236 LKRAEEFL 243
>gi|390443920|ref|ZP_10231705.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Nitritalea
halalkaliphila LW7]
gi|389665693|gb|EIM77157.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Nitritalea
halalkaliphila LW7]
Length = 242
Score = 181 bits (458), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 94/232 (40%), Positives = 136/232 (58%), Gaps = 2/232 (0%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR SSR K L ++ GKP+IQR ++ AT +D + +A D E++ C+ F +
Sbjct: 6 VIPARLQSSRLPEKVLADLGGKPLIQRVYDACLRATEVDEVWIACDHERVEAVCRTFTSH 65
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFS 172
VI TSE +GT+R EA + L+ Y ++N+QGDEP I+ ID V AL+ + + S
Sbjct: 66 VIRTSEQHESGTDRIAEAARGLQADY--IINVQGDEPFIDAATIDAVAVALREGQENMVS 123
Query: 173 TAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDS 232
P DPN VK V DN GYA+YFSR IP+ + GK + H+G+ Y S
Sbjct: 124 VYALGEDPTGLEDPNTVKVVTDNAGYALYFSRAPIPFPRDGKAAEGPLFQKHIGLYGYAS 183
Query: 233 NFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEK 284
FL+ + GL L+ E LEQL+ L +GYK+K+++V H G+D ED+E+
Sbjct: 184 AFLQTFAGLPAAHLEQTEKLEQLRALAHGYKIKMLEVSHPEKGIDTLEDLEQ 235
>gi|260592470|ref|ZP_05857928.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Prevotella
veroralis F0319]
gi|260535516|gb|EEX18133.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Prevotella
veroralis F0319]
Length = 283
Score = 181 bits (458), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 95/248 (38%), Positives = 147/248 (59%), Gaps = 5/248 (2%)
Query: 47 RSRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECC 106
R + +GIIPAR++SSRF GKPL + GKP+IQ +ER+K L + VATDDE+I
Sbjct: 35 RMKFLGIIPARYSSSRFPGKPLAQLGGKPVIQHVYERAK--QVLTDVYVATDDERIYNIV 92
Query: 107 QQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAA 166
FG +MT + ++GTER EAL K+E K+D+V+NIQGDEP I+ E I ++
Sbjct: 93 TAFGGKAVMTQANHQSGTERACEALDKIEGKFDVVINIQGDEPFIQTEQIRMIMSYFDDE 152
Query: 167 PDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK---SGKVNPQFPYLL 223
+ + + +D + N K V+D + A+YFSR IP+ + +P+L
Sbjct: 153 QTQIATLGIPLKSMQDVRNVNSPKIVLDINNNALYFSRSAIPFIRGIEQADWIGHYPFLK 212
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVE 283
H+G+ +Y L L P+ L+L E LEQL+ L+NGY++KV + E +D P+D+E
Sbjct: 213 HIGLYAYRVETLHEISKLPPSSLELAERLEQLRWLQNGYRIKVCITNIETVSIDTPQDLE 272
Query: 284 KIESFMRE 291
+ + ++++
Sbjct: 273 RAKEYLKQ 280
>gi|24374022|ref|NP_718065.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase KdsB [Shewanella
oneidensis MR-1]
gi|81589203|sp|Q8EEA9.1|KDSB_SHEON RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|24348489|gb|AAN55509.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase KdsB [Shewanella
oneidensis MR-1]
Length = 245
Score = 181 bits (458), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 102/241 (42%), Positives = 142/241 (58%), Gaps = 8/241 (3%)
Query: 50 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQF 109
V +IPAR+ SSRF GKPL I GKPMIQ +ER+ LA L ++ VATDDE+I + F
Sbjct: 3 VTLLIPARYGSSRFPGKPLAPINGKPMIQHVYERASLAKGLTNIYVATDDERIKSAVEGF 62
Query: 110 GADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
G V+MTS +GT+R N+A+ +L K D+V+N+QGD+PLI+P I+ V+ + P
Sbjct: 63 GGKVVMTSPDAASGTDRINDAINQLGLKDDDLVINLQGDQPLIDPTSIEQVISLFERHP- 121
Query: 169 AVFSTAVTS---LKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHL 225
F A + + DP VK V DN YA+YFSR IP+ + K +P HL
Sbjct: 122 GEFEMATLGYEIVNKAELDDPMHVKMVFDNDYYALYFSRARIPFGRDTK---DYPVYKHL 178
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKI 285
G+ +Y F++ + L L+ E LEQL+ LE G+K+KV ++ VD PED+ K
Sbjct: 179 GVYAYTRRFVQAFAALPLGRLEDLEKLEQLRALEYGHKIKVAISAFDSIEVDTPEDIRKC 238
Query: 286 E 286
E
Sbjct: 239 E 239
>gi|298159216|gb|EFI00274.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
savastanoi pv. savastanoi NCPPB 3335]
Length = 254
Score = 181 bits (458), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 100/246 (40%), Positives = 144/246 (58%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ SSRF GKPL I GKPM+Q WE++ ++ + +V+ATDD +I E CQ FGA+
Sbjct: 8 VIPARYGSSRFPGKPLKTIAGKPMVQLVWEQA-CKSSAERVVIATDDARIVEACQAFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V++T E +GT+R E +L D IVVN+QGDEP+I P +ID V L A P+A
Sbjct: 67 VLLTREDHNSGTDRLAEVAAQLGLAADAIVVNVQGDEPMIPPAVIDQVASNLAAHPEAGM 126
Query: 172 STAVTSLKPEDA-FDPNRVKCVVDNHGYAIYFSRGLIPYNKSG------KVNPQFPYLLH 224
ST + A F+PN VK D +G A+ FSR +P+ + ++ PY H
Sbjct: 127 STLAEPIDDVVALFNPNIVKVATDINGLALTFSRAPLPWARDALTANRDELPAGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDAPEDVE 283
+GI +Y + FL + P L+ E LEQL+ L NG ++ V ++ GVD PED+E
Sbjct: 187 IGIYAYRAGFLHDFVSWGPCWLENTESLEQLRALWNGVRIHVADALEAPPGGVDTPEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|329954962|ref|ZP_08295979.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Bacteroides
clarus YIT 12056]
gi|328527066|gb|EGF54077.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Bacteroides
clarus YIT 12056]
Length = 252
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 101/253 (39%), Positives = 149/253 (58%), Gaps = 10/253 (3%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR+AS+RF KPL + GK +IQR +E ++A LD VATDDE+I +
Sbjct: 2 KFLGIIPARYASTRFPAKPLALLGGKTVIQRVYE--QVAGVLDDAYVATDDERIEAAVKA 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG V+MTS ++GT+RC EA K+ +D+VVNIQGDEP I+P ++ VKA P
Sbjct: 60 FGGKVVMTSVHHKSGTDRCYEACTKVGDGFDVVVNIQGDEPFIQPSQLE-TVKACFDDPS 118
Query: 169 AVFSTAVTSLKPEDAFDP----NRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF---PY 221
+T V ++ F+ N K V++ + A+YFSR +IPY ++ + Y
Sbjct: 119 TQIATLVKPFTADNGFEALENVNSPKVVLNKNMNALYFSRSIIPYQRNAEKREWLKNHTY 178
Query: 222 LLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPED 281
H+G+ +Y LK L + L+L E LEQL+ LENGY +K + E G+D P+D
Sbjct: 179 YKHIGLYAYRVEVLKEITSLPQSSLELAESLEQLRWLENGYTIKAGITEVETIGIDTPQD 238
Query: 282 VEKIESFMRERNL 294
+E E F++ +N+
Sbjct: 239 LEHAERFLQAQNV 251
>gi|260768904|ref|ZP_05877838.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio furnissii
CIP 102972]
gi|260616934|gb|EEX42119.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio furnissii
CIP 102972]
Length = 247
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 98/242 (40%), Positives = 145/242 (59%), Gaps = 6/242 (2%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ S+R GKPL +I GKPM+Q +E++ A D ++VATDD ++ + FG
Sbjct: 6 VIPARYQSTRLPGKPLADIAGKPMVQWVYEQAMQAGA-DRVIVATDDARVEQAVNAFGGT 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS ++GTER E ++++ + D I+VN+QGDEPLI P II V L A+ +
Sbjct: 65 VCMTSPDHQSGTERLAEVVKRMGIEDDHIIVNVQGDEPLIPPSIIRQVADNLAASQAPMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF---PYLLHLGIQ 228
+ AV E+ F+PN VK V D GYA+YFSR IP+++ N + P + H+GI
Sbjct: 125 TLAVEISDAEEVFNPNAVKVVTDKDGYALYFSRASIPWDRDNFANDKTIVQPLMRHIGIY 184
Query: 229 SYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKIES 287
+Y + F+ Y P+ L+ E LEQL+VL G K+ V + ++ GVD PED+E +
Sbjct: 185 AYRAGFINTYIHWQPSQLEKIESLEQLRVLWYGEKIHVAVALEAPPAGVDTPEDLEAVRR 244
Query: 288 FM 289
+
Sbjct: 245 IV 246
>gi|15602723|ref|NP_245795.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pasteurella
multocida subsp. multocida str. Pm70]
gi|13431621|sp|P57883.1|KDSB_PASMU RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|12721168|gb|AAK02942.1| KdsB [Pasteurella multocida subsp. multocida str. Pm70]
Length = 258
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 105/251 (41%), Positives = 150/251 (59%), Gaps = 15/251 (5%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR+AS+R GKPL I GKPMI +E++ + + ++VATD E++A + FGA+
Sbjct: 7 IIPARYASTRLPGKPLAEIAGKPMIAHVFEKA-MQSGAKRVIVATDHEQVATVARGFGAE 65
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTSE+ ++GTER E ++KL D I+VNIQGDEPLI P I+ V + L +
Sbjct: 66 VCMTSETHQSGTERLAEVVEKLGIAEDEIIVNIQGDEPLIPPAIVRQVAENLAKYQVKMA 125
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS------------GKVNPQF 219
S AV PE+ F+PN VK + D+ GY +YFSR IP+++ G++
Sbjct: 126 SLAVNITDPEELFNPNAVKVLTDHAGYVLYFSRAPIPWHRDQFASLPKEKSTRGQLVLSD 185
Query: 220 PYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDA 278
YL H+GI +Y + F+K Y P+ L+ E LEQL+VL G K+ V + + GVD
Sbjct: 186 HYLRHIGIYAYRAGFIKQYIQWQPSVLEQIESLEQLRVLWYGEKIHVELAREVPPVGVDT 245
Query: 279 PEDVEKIESFM 289
ED+EK+ S +
Sbjct: 246 AEDLEKVRSIL 256
>gi|66044881|ref|YP_234722.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
syringae pv. syringae B728a]
gi|422619788|ref|ZP_16688475.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
syringae pv. japonica str. M301072]
gi|422632640|ref|ZP_16697805.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
syringae pv. pisi str. 1704B]
gi|422676161|ref|ZP_16735495.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
syringae pv. aceris str. M302273]
gi|424066711|ref|ZP_17804174.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas
syringae pv. avellanae str. ISPaVe013]
gi|440741935|ref|ZP_20921266.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
syringae BRIP39023]
gi|443644836|ref|ZP_21128686.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
syringae pv. syringae B64]
gi|75502758|sp|Q4ZVY8.1|KDSB_PSEU2 RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|63255588|gb|AAY36684.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas
syringae pv. syringae B728a]
gi|330900155|gb|EGH31574.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
syringae pv. japonica str. M301072]
gi|330942720|gb|EGH45262.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
syringae pv. pisi str. 1704B]
gi|330973869|gb|EGH73935.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
syringae pv. aceris str. M302273]
gi|408002000|gb|EKG42270.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas
syringae pv. avellanae str. ISPaVe013]
gi|440378272|gb|ELQ14897.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
syringae BRIP39023]
gi|443284853|gb|ELS43858.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
syringae pv. syringae B64]
Length = 254
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 99/246 (40%), Positives = 144/246 (58%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ SSRF GKPL I GKPM+Q WE++ ++ + +V+ATDD +I E CQ FGA+
Sbjct: 8 VIPARYGSSRFPGKPLKTIAGKPMVQLVWEQA-CKSSAERVVIATDDARIVEACQAFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V++T + +GT+R E +L D IVVN+QGDEP+I P +ID V L A P+A
Sbjct: 67 VLLTRDDHNSGTDRLAEVAAQLGLAADAIVVNVQGDEPMIPPAVIDQVASNLAAHPEAGM 126
Query: 172 STAVTSLKPEDA-FDPNRVKCVVDNHGYAIYFSRGLIPYNKSG------KVNPQFPYLLH 224
ST + A F+PN VK D +G A+ FSR +P+ + ++ PY H
Sbjct: 127 STLAEPIDDVAALFNPNIVKVATDINGLALTFSRAPLPWARDALAANRDQLPAGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDAPEDVE 283
+GI +Y + FL + P L+ E LEQL+ L NG ++ V ++ GVD PED+E
Sbjct: 187 IGIYAYRAGFLHDFVSWGPCWLENTESLEQLRALWNGVRIHVADALEAPPGGVDTPEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|238893974|ref|YP_002918708.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae subsp. pneumoniae NTUH-K2044]
gi|238546290|dbj|BAH62641.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae subsp. pneumoniae NTUH-K2044]
Length = 248
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 103/246 (41%), Positives = 147/246 (59%), Gaps = 7/246 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPARFAS+R GKPL +I GKPMI ER++ + D ++VATD E +A + G
Sbjct: 4 VVIIPARFASTRLPGKPLQDINGKPMIVHVLERAR-ESGADRIIVATDHEDVARAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D I+VNIQGDEP+I P I+ V + L A+
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCAFSDDTIIVNIQGDEPMIPPAIVRQVAENLAASSSG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK----SGKVNPQFPYLLHL 225
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ + L H+
Sbjct: 123 MATLAVPIHDAEEAFNPNAVKVVMDAEGYALYFSRATIPWDRDRFAQSRETIGDSLLRHI 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI Y + F++ Y P+PL+ E LEQL+VL G K+ V + + GVD PED+E+
Sbjct: 183 GIYGYRAGFIRRYVSWAPSPLEQIEMLEQLRVLWYGEKIHVAVAAEVPGTGVDTPEDLER 242
Query: 285 IESFMR 290
+ + +R
Sbjct: 243 VRAELR 248
>gi|91793488|ref|YP_563139.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Shewanella
denitrificans OS217]
gi|123060858|sp|Q12MB0.1|KDSB_SHEDO RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|91715490|gb|ABE55416.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shewanella
denitrificans OS217]
Length = 245
Score = 180 bits (457), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 102/242 (42%), Positives = 143/242 (59%), Gaps = 8/242 (3%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+V +IPARF SSRF GKPL I GKPMIQ +ER+ LA LD + VATDD++I + +
Sbjct: 2 KVTLLIPARFGSSRFPGKPLAPINGKPMIQHVYERASLAKGLDAIYVATDDDRIKDAVEA 61
Query: 109 FGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
FG V+MTS + +GT+R N+A+++L D+V+N+QGD+PLI+P I+ +V + P
Sbjct: 62 FGGKVVMTSAAAASGTDRINDAIEQLGLSDDDLVINLQGDQPLIDPISIEQIVSLFERHP 121
Query: 168 DAVFSTAVTSLKPEDAF---DPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLH 224
F A + D DP VK V DN A+YFSR IP+ G+ +P H
Sbjct: 122 -GEFEMATLGFEITDKSELDDPMHVKMVFDNDFNALYFSRARIPF---GRDTNDYPVYKH 177
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEK 284
LG+ +Y F+ + L L+ E LEQL+ LE G+K+KV ++ VD PED+ K
Sbjct: 178 LGVYAYTKRFVNAFAKLPLGKLEDLEKLEQLRALEYGHKIKVAISAFDSPEVDTPEDIRK 237
Query: 285 IE 286
E
Sbjct: 238 CE 239
>gi|289671952|ref|ZP_06492842.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
syringae pv. syringae FF5]
Length = 254
Score = 180 bits (457), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 99/246 (40%), Positives = 144/246 (58%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ SSRF GKPL I GKPM+Q WE++ ++ + +V+ATDD +I E CQ FGA+
Sbjct: 8 VIPARYGSSRFPGKPLKTIAGKPMVQLVWEQA-CKSSAERVVIATDDARIVEACQAFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V++T + +GT+R E +L D IVVN+QGDEP+I P +ID V L A P+A
Sbjct: 67 VLLTRDDHNSGTDRLAEVAAQLGLATDAIVVNVQGDEPMIPPAVIDQVASNLAAHPEAGM 126
Query: 172 STAVTSLKPEDA-FDPNRVKCVVDNHGYAIYFSRGLIPYNKSG------KVNPQFPYLLH 224
ST + A F+PN VK D +G A+ FSR +P+ + ++ PY H
Sbjct: 127 STLAEPIDDVAALFNPNIVKVATDINGLALTFSRAPLPWARDALAANRDQLPAGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDAPEDVE 283
+GI +Y + FL + P L+ E LEQL+ L NG ++ V ++ GVD PED+E
Sbjct: 187 IGIYAYRAGFLHDFVSWGPCWLENTESLEQLRALWNGVRIHVADALEAPPGGVDTPEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|288802473|ref|ZP_06407912.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Prevotella
melaninogenica D18]
gi|288335001|gb|EFC73437.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Prevotella
melaninogenica D18]
Length = 246
Score = 180 bits (457), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 94/245 (38%), Positives = 149/245 (60%), Gaps = 5/245 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR++SSRF GKPL + GK +I+ + ++++ ++ + VATDD++I + +
Sbjct: 2 KFIGIIPARYSSSRFPGKPLAILGGKAVIEHVYR--QVSSVMEDVFVATDDQRIYDAVEA 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG IMT ++GT+R EAL K+ +D+V+NIQGDEP I+ ++ V++
Sbjct: 60 FGGKAIMTRSDHQSGTDRICEALDKVGGDFDVVINIQGDEPFIQRSQLETVMQCFDDPRT 119
Query: 169 AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPY---NKSGKVNPQFPYLLHL 225
+ + E +PN K V+DN GYA+YFSR +IP+ +S + FP+L H+
Sbjct: 120 QIATLGKPFESMEAVENPNSPKIVLDNDGYALYFSRSVIPFVRGKESAEWLTHFPFLKHI 179
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKI 285
G+ +Y + L+ L + L+L E LEQL+ L+NGYK+KV D E G+D PED++
Sbjct: 180 GLYAYRTEVLREVSRLPQSSLELAESLEQLRWLQNGYKIKVGLTDIETIGIDTPEDLQNA 239
Query: 286 ESFMR 290
E +R
Sbjct: 240 EEKLR 244
>gi|424033154|ref|ZP_17772570.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HENC-01]
gi|408875233|gb|EKM14387.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio cholerae
HENC-01]
Length = 252
Score = 180 bits (457), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 104/244 (42%), Positives = 146/244 (59%), Gaps = 9/244 (3%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ASSR GKPL +I GKPMIQ +E++ A D +++ATDDE+++ +QFG
Sbjct: 6 VIPARYASSRLPGKPLADIGGKPMIQWVYEQALQAGAED-VIIATDDERVSVAAEQFGGK 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS + +GTER E ++K+ D I+VN+QGDEPLI P II V L +
Sbjct: 65 VCMTSPNHESGTERLAEVVEKMAIPADHILVNVQGDEPLIPPSIIRQVADNLAGCDAPMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ----FPYLLHLGI 227
+ AV E+ F+PN VK V D GYA+YFSR IP+++ P + H+GI
Sbjct: 125 TLAVEIESEEEVFNPNAVKVVADERGYAMYFSRATIPWDRDNFAKQDNTIANPLMRHIGI 184
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEA--HGVDAPEDVEKI 285
+Y + F+ Y P+ L+ E LEQL+VL G K+ V +V EA GVD PED+E +
Sbjct: 185 YAYRAGFINTYVNWQPSALEQIECLEQLRVLWYGEKIHV-EVAKEAPVAGVDTPEDLEAV 243
Query: 286 ESFM 289
+ +
Sbjct: 244 RAIV 247
>gi|330014002|ref|ZP_08307838.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Klebsiella sp.
MS 92-3]
gi|386034129|ref|YP_005954042.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae KCTC 2242]
gi|424829924|ref|ZP_18254652.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae subsp. pneumoniae Ecl8]
gi|328533295|gb|EGF60046.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Klebsiella sp.
MS 92-3]
gi|339761257|gb|AEJ97477.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae KCTC 2242]
gi|414707349|emb|CCN29053.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae subsp. pneumoniae Ecl8]
Length = 248
Score = 180 bits (457), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 103/246 (41%), Positives = 147/246 (59%), Gaps = 7/246 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPARFAS+R GKPL +I GKPMI ER++ + D ++VATD E +A + G
Sbjct: 4 VVIIPARFASTRLPGKPLQDINGKPMIVHVLERAR-ESGADRIIVATDHEDVARAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D I+VNIQGDEP+I P I+ V + L A+
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCAFSDDTIIVNIQGDEPMIPPAIVRQVAENLAASSSG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP----YLLHL 225
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ + L H+
Sbjct: 123 MATLAVPIHDAEEAFNPNAVKVVMDAEGYALYFSRATIPWDRDRFAQTRETIGDSLLRHI 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI Y + F++ Y P+PL+ E LEQL+VL G K+ V + + GVD PED+E+
Sbjct: 183 GIYGYRAGFIRRYVSWAPSPLEQIEMLEQLRVLWYGEKIHVAVAAEVPGTGVDTPEDLER 242
Query: 285 IESFMR 290
+ + +R
Sbjct: 243 VRAELR 248
>gi|424934212|ref|ZP_18352584.1| 3-deoxy-manno-octulosonate cytidylyltransferase
(CMP-2-keto-3-deoxyoctulosonic acid synthase)
[Klebsiella pneumoniae subsp. pneumoniae KpQ3]
gi|449050091|ref|ZP_21731593.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae hvKP1]
gi|407808399|gb|EKF79650.1| 3-deoxy-manno-octulosonate cytidylyltransferase
(CMP-2-keto-3-deoxyoctulosonic acid synthase)
[Klebsiella pneumoniae subsp. pneumoniae KpQ3]
gi|448876654|gb|EMB11638.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae hvKP1]
Length = 248
Score = 180 bits (457), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 103/246 (41%), Positives = 147/246 (59%), Gaps = 7/246 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPARFAS+R GKPL +I GKPMI ER++ + D ++VATD E +A + G
Sbjct: 4 VVIIPARFASTRLPGKPLQDINGKPMIVHVLERAR-ESGADRIIVATDHEDVARAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D I+VNIQGDEP+I P I+ V + L A+
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCAFSDDTIIVNIQGDEPMIPPAIVRQVAENLAASSSG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP----YLLHL 225
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ + L H+
Sbjct: 123 MATLAVPIHDAEEAFNPNAVKVVMDAKGYALYFSRATIPWDRDRFAQTRETIGDSLLRHI 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI Y + F++ Y P+PL+ E LEQL+VL G K+ V + + GVD PED+E+
Sbjct: 183 GIYGYRAGFIRRYVSWAPSPLEQIEMLEQLRVLWYGEKIHVAVAAEVPGTGVDTPEDLER 242
Query: 285 IESFMR 290
+ + +R
Sbjct: 243 VRAELR 248
>gi|152969502|ref|YP_001334611.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae subsp. pneumoniae MGH 78578]
gi|262040983|ref|ZP_06014205.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae subsp. rhinoscleromatis ATCC 13884]
gi|365139379|ref|ZP_09345787.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella sp.
4_1_44FAA]
gi|419971904|ref|ZP_14487334.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae subsp. pneumoniae KPNIH1]
gi|419978710|ref|ZP_14494005.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae subsp. pneumoniae KPNIH2]
gi|419985483|ref|ZP_14500623.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae subsp. pneumoniae KPNIH4]
gi|419989565|ref|ZP_14504540.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae subsp. pneumoniae KPNIH5]
gi|419995015|ref|ZP_14509823.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae subsp. pneumoniae KPNIH6]
gi|420003486|ref|ZP_14518131.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae subsp. pneumoniae KPNIH7]
gi|420009136|ref|ZP_14523621.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae subsp. pneumoniae KPNIH8]
gi|420016871|ref|ZP_14531157.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae subsp. pneumoniae KPNIH9]
gi|420019067|ref|ZP_14533262.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae subsp. pneumoniae KPNIH10]
gi|420025109|ref|ZP_14539119.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae subsp. pneumoniae KPNIH11]
gi|420032219|ref|ZP_14546035.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae subsp. pneumoniae KPNIH12]
gi|420039566|ref|ZP_14553198.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae subsp. pneumoniae KPNIH14]
gi|420043640|ref|ZP_14557126.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae subsp. pneumoniae KPNIH16]
gi|420050022|ref|ZP_14563325.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae subsp. pneumoniae KPNIH17]
gi|420062150|ref|ZP_14575128.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae subsp. pneumoniae KPNIH19]
gi|420068144|ref|ZP_14580928.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae subsp. pneumoniae KPNIH20]
gi|420073975|ref|ZP_14586593.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae subsp. pneumoniae KPNIH21]
gi|420077580|ref|ZP_14590044.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae subsp. pneumoniae KPNIH22]
gi|420082152|ref|ZP_14594453.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae subsp. pneumoniae KPNIH23]
gi|425077401|ref|ZP_18480504.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae subsp. pneumoniae WGLW1]
gi|425080758|ref|ZP_18483855.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae subsp. pneumoniae WGLW2]
gi|425088034|ref|ZP_18491127.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae subsp. pneumoniae WGLW3]
gi|425090820|ref|ZP_18493905.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae subsp. pneumoniae WGLW5]
gi|428933592|ref|ZP_19007141.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae JHCK1]
gi|428941948|ref|ZP_19014971.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae VA360]
gi|166220467|sp|A6T710.1|KDSB_KLEP7 RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|150954351|gb|ABR76381.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae subsp. pneumoniae MGH 78578]
gi|259041677|gb|EEW42726.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae subsp. rhinoscleromatis ATCC 13884]
gi|363654348|gb|EHL93258.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella sp.
4_1_44FAA]
gi|397351153|gb|EJJ44238.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae subsp. pneumoniae KPNIH2]
gi|397351297|gb|EJJ44381.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae subsp. pneumoniae KPNIH4]
gi|397352842|gb|EJJ45920.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae subsp. pneumoniae KPNIH1]
gi|397368788|gb|EJJ61393.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae subsp. pneumoniae KPNIH6]
gi|397369064|gb|EJJ61666.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae subsp. pneumoniae KPNIH5]
gi|397369306|gb|EJJ61907.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae subsp. pneumoniae KPNIH7]
gi|397374351|gb|EJJ66693.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae subsp. pneumoniae KPNIH9]
gi|397381916|gb|EJJ74081.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae subsp. pneumoniae KPNIH8]
gi|397389728|gb|EJJ81661.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae subsp. pneumoniae KPNIH10]
gi|397397666|gb|EJJ89338.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae subsp. pneumoniae KPNIH11]
gi|397397986|gb|EJJ89652.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae subsp. pneumoniae KPNIH12]
gi|397403011|gb|EJJ94604.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae subsp. pneumoniae KPNIH14]
gi|397411949|gb|EJK03193.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae subsp. pneumoniae KPNIH17]
gi|397413446|gb|EJK04659.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae subsp. pneumoniae KPNIH16]
gi|397426931|gb|EJK17726.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae subsp. pneumoniae KPNIH20]
gi|397428877|gb|EJK19605.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae subsp. pneumoniae KPNIH19]
gi|397437070|gb|EJK27646.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae subsp. pneumoniae KPNIH21]
gi|397445769|gb|EJK36002.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae subsp. pneumoniae KPNIH22]
gi|397452514|gb|EJK42583.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae subsp. pneumoniae KPNIH23]
gi|405593110|gb|EKB66562.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae subsp. pneumoniae WGLW1]
gi|405602166|gb|EKB75308.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae subsp. pneumoniae WGLW3]
gi|405605529|gb|EKB78559.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae subsp. pneumoniae WGLW2]
gi|405613556|gb|EKB86287.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae subsp. pneumoniae WGLW5]
gi|426299603|gb|EKV61932.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae VA360]
gi|426304963|gb|EKV67095.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae JHCK1]
Length = 248
Score = 180 bits (457), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 103/246 (41%), Positives = 147/246 (59%), Gaps = 7/246 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPARFAS+R GKPL +I GKPMI ER++ + D ++VATD E +A + G
Sbjct: 4 VVIIPARFASTRLPGKPLQDINGKPMIVHVLERAR-ESGADRIIVATDHEDVARAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D I+VNIQGDEP+I P I+ V + L A+
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCAFSDDTIIVNIQGDEPMIPPAIVRQVAENLAASSSG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK----SGKVNPQFPYLLHL 225
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ + L H+
Sbjct: 123 MATLAVPIHDAEEAFNPNAVKVVMDAKGYALYFSRATIPWDRDRFAQSRETIGDSLLRHI 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI Y + F++ Y P+PL+ E LEQL+VL G K+ V + + GVD PED+E+
Sbjct: 183 GIYGYRAGFIRRYVSWAPSPLEQIEMLEQLRVLWYGEKIHVAVAAEVPGTGVDTPEDLER 242
Query: 285 IESFMR 290
+ + +R
Sbjct: 243 VRAELR 248
>gi|400756108|ref|YP_006564476.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Phaeobacter
gallaeciensis 2.10]
gi|398655261|gb|AFO89231.1| 3-deoxy-manno-octulosonate cytidylyltransferase KdsB [Phaeobacter
gallaeciensis 2.10]
Length = 266
Score = 180 bits (457), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 101/260 (38%), Positives = 148/260 (56%), Gaps = 18/260 (6%)
Query: 50 VVGIIPARFASSRFEGKPLVNILG-----KPMIQRTWERSKLATTLDHLVVATDDEKIAE 104
V+ +IPAR+AS+R+ GKPLV + G + +I+R+W + +D +VVATDDE+I
Sbjct: 3 VLIVIPARYASTRYPGKPLVALTGASGESQTLIERSWRAAMAVNGVDRVVVATDDERIRG 62
Query: 105 CCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQ 164
FGA+V+MTSESC NGTERC EAL LE YDIVVN+QGD PL ++ ++ L+
Sbjct: 63 AATGFGAEVVMTSESCGNGTERCAEALATLEGGYDIVVNLQGDAPLTPHWFVEDLISGLR 122
Query: 165 AAPDAVFSTAV---------TSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSG-K 214
APD +T V + L A V A+YFS+ ++P+ + +
Sbjct: 123 DAPDKGLATPVLRCDGATLNSLLADRKAGRVGGTTAVFGRDNNALYFSKEVVPFTSTAYE 182
Query: 215 VNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVD---H 271
+ P H+G+ +Y + L YPG PL+ E LEQL+ LENG K+ ++V+
Sbjct: 183 ADQDTPVFHHVGVYAYRPDALSAYPGWPVGPLETLEGLEQLRFLENGRKILCVEVEARGR 242
Query: 272 EAHGVDAPEDVEKIESFMRE 291
E ++ PEDV IE+ M++
Sbjct: 243 EFWELNNPEDVPLIEAMMKK 262
>gi|402781539|ref|YP_006637085.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae subsp. pneumoniae 1084]
gi|402542416|gb|AFQ66565.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae subsp. pneumoniae 1084]
Length = 245
Score = 180 bits (457), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 102/244 (41%), Positives = 146/244 (59%), Gaps = 7/244 (2%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPARFAS+R GKPL +I GKPMI ER++ + D ++VATD E +A + G +
Sbjct: 3 IIPARFASTRLPGKPLQDINGKPMIVHVLERAR-ESGADRIIVATDHEDVARAVEAAGGE 61
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MT ++GTER E ++K D I+VNIQGDEP+I P I+ V + L A+ +
Sbjct: 62 VCMTRADHQSGTERLAEVVEKCAFSDDTIIVNIQGDEPMIPPAIVRQVAENLAASSSGMA 121
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK----SGKVNPQFPYLLHLGI 227
+ AV E+AF+PN VK V+D GYA+YFSR IP+++ + L H+GI
Sbjct: 122 TLAVPIHDAEEAFNPNAVKVVMDAEGYALYFSRATIPWDRDRFAQSRETIGDSLLRHIGI 181
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKIE 286
Y + F++ Y P+PL+ E LEQL+VL G K+ V + + GVD PED+E++
Sbjct: 182 YGYRAGFIRRYVSWAPSPLEQIEMLEQLRVLWYGEKIHVAVAAEVPGTGVDTPEDLERVR 241
Query: 287 SFMR 290
+ +R
Sbjct: 242 AELR 245
>gi|339486462|ref|YP_004700990.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas putida
S16]
gi|338837305|gb|AEJ12110.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas putida
S16]
Length = 254
Score = 180 bits (457), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 102/246 (41%), Positives = 145/246 (58%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR S+R GKPL+ I GKPM+Q WE+++ + +V+ATDD I E CQ FGA+
Sbjct: 8 VIPARLRSTRLPGKPLLLIAGKPMVQHVWEQAR-KSGAGRVVIATDDASILEACQAFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V+MT +GT+R E + L D IVVN+QGDEPLI P IID V L A P+A
Sbjct: 67 VLMTRADHESGTDRLAEVVAHLGLPADAIVVNVQGDEPLIPPVIIDQVAANLAAHPEAGI 126
Query: 172 STAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSG-----KVNPQ-FPYLLH 224
ST + +PE F+PN VK V D +G A+ FSR +P+ + + P+ PY H
Sbjct: 127 STLAEPIHEPETVFNPNAVKVVSDKNGLALAFSRAPLPWARDAFAKDRNLLPEGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVE 283
+G+ +Y FL+ + P L+ E LEQL+ L +G ++ V ++ A GVD PED+E
Sbjct: 187 IGMYAYRVGFLQDFVSWGPCWLEQTEALEQLRALWHGVRIHVEDAIEAPAVGVDTPEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|91225260|ref|ZP_01260428.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio
alginolyticus 12G01]
gi|91189899|gb|EAS76171.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio
alginolyticus 12G01]
Length = 251
Score = 180 bits (457), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 101/246 (41%), Positives = 145/246 (58%), Gaps = 7/246 (2%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IP+R+ASSR GKPL +I GKPM+Q +E++ A D ++VATDDE++A+ FG
Sbjct: 6 VIPSRYASSRLPGKPLADIGGKPMVQWVYEQALQAGAED-VIVATDDERVAKAVSSFGGK 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS +GTER E ++K+ D I+VN+QGDEPLI P II V L +
Sbjct: 65 VCMTSPHHESGTERLAEVVEKMAIPSDHIIVNVQGDEPLIPPSIIRQVADNLSGCEAPMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ----FPYLLHLGI 227
+ AV E+ F+PN VK V D GYA+YFSR IP+++ P + H+GI
Sbjct: 125 TLAVEIDSEEEVFNPNAVKVVADEQGYALYFSRATIPWDRDNFAKQDKTIANPLMRHIGI 184
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKIE 286
+Y + F+ Y P+ L+ E LEQL+VL G K+ V + + A GVD PED+E +
Sbjct: 185 YAYRAGFINTYVNWAPSALEQIECLEQLRVLWYGEKIHVAVAKEAPAAGVDTPEDLEAVR 244
Query: 287 SFMRER 292
+ + ++
Sbjct: 245 AIVAKQ 250
>gi|440719692|ref|ZP_20900116.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
syringae BRIP34876]
gi|440728806|ref|ZP_20909008.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
syringae BRIP34881]
gi|440360589|gb|ELP97852.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
syringae BRIP34881]
gi|440367338|gb|ELQ04403.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
syringae BRIP34876]
Length = 254
Score = 180 bits (457), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 99/246 (40%), Positives = 144/246 (58%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ SSRF GKPL I GKPM+Q WE++ ++ + +V+ATDD +I E CQ FGA+
Sbjct: 8 VIPARYGSSRFPGKPLKTIAGKPMVQLVWEQA-CKSSAERVVIATDDARIVEACQAFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V++T + +GT+R E +L D IVVN+QGDEP+I P +ID V L A P+A
Sbjct: 67 VLLTRDDHNSGTDRLAEVAAQLGLAADAIVVNVQGDEPMIPPAVIDQVASNLAAHPEAGM 126
Query: 172 STAVTSLKPEDA-FDPNRVKCVVDNHGYAIYFSRGLIPYNKSG------KVNPQFPYLLH 224
ST + A F+PN VK D +G A+ FSR +P+ + ++ PY H
Sbjct: 127 STLAEPIDHVAALFNPNIVKVATDINGLALTFSRAPLPWARDALAANRDQLPAGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDAPEDVE 283
+GI +Y + FL + P L+ E LEQL+ L NG ++ V ++ GVD PED+E
Sbjct: 187 IGIYAYRAGFLHDFVSWGPCWLENTESLEQLRALWNGVRIHVADALEAPPGGVDTPEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|114776258|ref|ZP_01451303.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Mariprofundus
ferrooxydans PV-1]
gi|114553088|gb|EAU55486.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Mariprofundus
ferrooxydans PV-1]
Length = 239
Score = 180 bits (457), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 98/237 (41%), Positives = 141/237 (59%), Gaps = 8/237 (3%)
Query: 54 IPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADV 113
IPAR S+RF GKPL + G+PMI+ E+++ A L + VATDD +IA+ + GA V
Sbjct: 7 IPARMGSTRFPGKPLAQLAGRPMIEHVIEKAQ-AADLGPVFVATDDRRIADAARATGAMV 65
Query: 114 IMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFST 173
MTS +G++R EA+++++ D+V+N+QGDEPLI+P I VV+ A P +T
Sbjct: 66 CMTSPDHASGSDRLAEAVREID--CDVVINVQGDEPLIDPAAIRAVVEPFTADPYLPMAT 123
Query: 174 AVTSLK-PEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDS 232
L+ P+D FD N VK + + G A+YFSR IP+ +SG N + H+G+ +Y
Sbjct: 124 LAHPLRNPDDLFDANVVKLITNAKGRAMYFSRAAIPFPRSGSPN----AMQHVGLYAYRR 179
Query: 233 NFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFM 289
FL IYP L P + E LEQL+VL +GY + V D GVD P D+ + E +
Sbjct: 180 EFLLIYPTLSPCEAEQTEQLEQLRVLHHGYDIAVTVGDFHCIGVDTPADLARAEKLL 236
>gi|126174588|ref|YP_001050737.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Shewanella baltica
OS155]
gi|217973160|ref|YP_002357911.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Shewanella baltica
OS223]
gi|373949701|ref|ZP_09609662.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Shewanella baltica
OS183]
gi|386324467|ref|YP_006020584.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Shewanella baltica
BA175]
gi|386341343|ref|YP_006037709.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Shewanella baltica
OS117]
gi|418025387|ref|ZP_12664366.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Shewanella baltica
OS625]
gi|226724330|sp|A3D555.1|KDSB_SHEB5 RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|254807768|sp|B8E9F5.1|KDSB_SHEB2 RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|125997793|gb|ABN61868.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shewanella
baltica OS155]
gi|217498295|gb|ACK46488.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shewanella
baltica OS223]
gi|333818612|gb|AEG11278.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Shewanella baltica
BA175]
gi|334863744|gb|AEH14215.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Shewanella baltica
OS117]
gi|353535371|gb|EHC04934.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Shewanella baltica
OS625]
gi|373886301|gb|EHQ15193.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Shewanella baltica
OS183]
Length = 245
Score = 180 bits (457), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 100/241 (41%), Positives = 143/241 (59%), Gaps = 8/241 (3%)
Query: 50 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQF 109
V +IPAR+ SSRF GKPL I GKPMIQ +ER+ LA L ++ VATDD++I + F
Sbjct: 3 VTLLIPARYGSSRFPGKPLAPINGKPMIQHVYERASLAKGLTNIYVATDDDRIKAAVEGF 62
Query: 110 GADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
G V+MTS +GT+R N+A+ +L K D+V+N+QGD+PLI+P I+ V+ + P
Sbjct: 63 GGKVVMTSPEAASGTDRINDAINQLGLKDDDLVINLQGDQPLIDPTSIEQVISLFERHP- 121
Query: 169 AVFSTAVTSLK---PEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHL 225
F A + + DP VK V DN+ YA+YFSR IP+ G+ +P HL
Sbjct: 122 GEFEMATLGFEIVNKAELDDPMHVKMVFDNNNYALYFSRSRIPF---GRDTQDYPVYKHL 178
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKI 285
G+ +Y F++ + L L+ E LEQL+ LE G+K+K+ ++ VD PED+ K
Sbjct: 179 GVYAYTRKFVQAFAALPLGRLEDLEKLEQLRALEYGHKIKIAISAFDSIEVDTPEDIRKC 238
Query: 286 E 286
E
Sbjct: 239 E 239
>gi|387770775|ref|ZP_10126950.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pasteurella
bettyae CCUG 2042]
gi|386903525|gb|EIJ68335.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pasteurella
bettyae CCUG 2042]
Length = 257
Score = 180 bits (457), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 106/251 (42%), Positives = 151/251 (60%), Gaps = 15/251 (5%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPARFASSR GKPL +I G+PMI E++KL+ ++VATD+E + + +QFG +
Sbjct: 7 IIPARFASSRLPGKPLADIAGRPMIIHVLEKAKLSGA-SRVIVATDNEDVKKVVEQFGGE 65
Query: 113 VIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTSE +GTER E + KL +I+VNIQGDEPLI P I+ V + L +
Sbjct: 66 VCMTSEKHNSGTERLAEVVDKLNISDNEIIVNIQGDEPLIPPVIVSQVAENLCKFNVNMA 125
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK-------SGKVN-PQFP--- 220
+ V + E+ F+PN VK + D GY +YFSR +IP+++ SG++ Q
Sbjct: 126 TLGVKIHESEELFNPNAVKVLTDKDGYVLYFSRAVIPWDRDQFAKLQSGQIGLAQLKLSD 185
Query: 221 -YLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDA 278
YL H+GI +Y + F+K Y P+ L+ E LEQL+VL G K+ V + + A GVD
Sbjct: 186 HYLRHIGIYAYRAGFIKQYVQWQPSALEQIESLEQLRVLWYGEKIHVELAKEVPAVGVDT 245
Query: 279 PEDVEKIESFM 289
PED+EK+ + +
Sbjct: 246 PEDLEKVRAIL 256
>gi|399521349|ref|ZP_10762089.1| 3-deoxy-D-manno-octulosonatecytidylyltransferase [Pseudomonas
pseudoalcaligenes CECT 5344]
gi|399110587|emb|CCH38648.1| 3-deoxy-D-manno-octulosonatecytidylyltransferase [Pseudomonas
pseudoalcaligenes CECT 5344]
Length = 254
Score = 180 bits (456), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 107/251 (42%), Positives = 146/251 (58%), Gaps = 20/251 (7%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+AS+R GKPL +I GKPM+Q WE++K ++ +V+ATDD +I E CQ FGA+
Sbjct: 8 VIPARYASTRLPGKPLQDIAGKPMVQHVWEQAK-KSSAQRVVIATDDARIVEACQAFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V++T E +GT+R E +L D IVVN+QGDEPLI P IID V L A P A
Sbjct: 67 VLLTREDHNSGTDRLAEVATQLGLPADAIVVNVQGDEPLIPPVIIDQVAANLAANPQAGI 126
Query: 172 STA------VTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSG-----KVNPQ-F 219
+T VTSL F+PN VK V D G A+ FSR + + + V PQ
Sbjct: 127 ATLAEPIEDVTSL-----FNPNVVKVVADKSGLALTFSRAPLAWARDAFAKCRDVLPQGV 181
Query: 220 PYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDA 278
PY H+GI +Y + FL + P L+ E LEQL+ L NG ++ V ++ A GVD
Sbjct: 182 PYRRHIGIYAYRAGFLHDFVAWGPCWLEDTECLEQLRALYNGVRIHVADALEAPAAGVDT 241
Query: 279 PEDVEKIESFM 289
ED+E++ +
Sbjct: 242 AEDLERVRHLL 252
>gi|153000883|ref|YP_001366564.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Shewanella baltica
OS185]
gi|226724331|sp|A6WNW2.1|KDSB_SHEB8 RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|151365501|gb|ABS08501.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shewanella
baltica OS185]
Length = 245
Score = 180 bits (456), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 100/241 (41%), Positives = 143/241 (59%), Gaps = 8/241 (3%)
Query: 50 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQF 109
V +IPAR+ SSRF GKPL I GKPMIQ +ER+ LA L ++ VATDD++I + F
Sbjct: 3 VTLLIPARYGSSRFPGKPLAPINGKPMIQHVYERASLAKGLTNIYVATDDDRIKAAVEGF 62
Query: 110 GADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
G V+MTS +GT+R N+A+ +L K D+V+N+QGD+PLI+P I+ V+ + P
Sbjct: 63 GGKVVMTSPEAASGTDRINDAINQLGLKDDDLVINLQGDQPLIDPTSIEQVISLFERHP- 121
Query: 169 AVFSTAVTSLK---PEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHL 225
F A + + DP VK V DN+ YA+YFSR IP+ G+ +P HL
Sbjct: 122 GEFEMATLGFEIVNKTELDDPMHVKMVFDNNNYALYFSRSRIPF---GRDTQDYPVYKHL 178
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKI 285
G+ +Y F++ + L L+ E LEQL+ LE G+K+K+ ++ VD PED+ K
Sbjct: 179 GVYAYTRKFVQAFAALPLGRLEDLEKLEQLRALEYGHKIKIAISAFDSIEVDTPEDIRKC 238
Query: 286 E 286
E
Sbjct: 239 E 239
>gi|160875590|ref|YP_001554906.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Shewanella baltica
OS195]
gi|378708790|ref|YP_005273684.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shewanella
baltica OS678]
gi|226724332|sp|A9L3N6.1|KDSB_SHEB9 RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|160861112|gb|ABX49646.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shewanella
baltica OS195]
gi|315267779|gb|ADT94632.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shewanella
baltica OS678]
Length = 245
Score = 180 bits (456), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 100/241 (41%), Positives = 143/241 (59%), Gaps = 8/241 (3%)
Query: 50 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQF 109
V +IPAR+ SSRF GKPL I GKPMIQ +ER+ LA L ++ VATDD++I + F
Sbjct: 3 VTLLIPARYGSSRFPGKPLAPINGKPMIQHVYERASLAKGLTNIYVATDDDRIKAAVEGF 62
Query: 110 GADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
G V+MTS +GT+R N+A+ +L K D+V+N+QGD+PLI+P I+ V+ + P
Sbjct: 63 GGKVVMTSPDAASGTDRINDAINQLGLKDDDLVINLQGDQPLIDPTSIEQVISLFERHP- 121
Query: 169 AVFSTAVTSLK---PEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHL 225
F A + + DP VK V DN+ YA+YFSR IP+ G+ +P HL
Sbjct: 122 GEFEMATLGFEIVNKAELDDPMHVKMVFDNNNYALYFSRSRIPF---GRDTQDYPVYKHL 178
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKI 285
G+ +Y F++ + L L+ E LEQL+ LE G+K+K+ ++ VD PED+ K
Sbjct: 179 GVYAYTRKFVQAFAALPLGRLEDLEKLEQLRALEYGHKIKIAISAFDSIEVDTPEDIRKC 238
Query: 286 E 286
E
Sbjct: 239 E 239
>gi|40889895|pdb|1VH3|A Chain A, Crystal Structure Of Cmp-kdo Synthetase
gi|40889896|pdb|1VH3|B Chain B, Crystal Structure Of Cmp-kdo Synthetase
gi|40889897|pdb|1VH3|C Chain C, Crystal Structure Of Cmp-kdo Synthetase
Length = 262
Score = 180 bits (456), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 106/247 (42%), Positives = 147/247 (59%), Gaps = 11/247 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPARFASSR GKPL +I GKP IQ +E++ L + +++ATD+E +A+ + FGA+
Sbjct: 6 IIPARFASSRLPGKPLADIKGKPXIQHVFEKA-LQSGASRVIIATDNENVADVAKSFGAE 64
Query: 113 VIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V TS + +GTER E ++KL +I+VNIQGDEPLI P I+ V L
Sbjct: 65 VCXTSVNHNSGTERLAEVVEKLAIPDNEIIVNIQGDEPLIPPVIVRQVADNLAKFNVNXA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS--------GKVNPQFPYLL 223
S AV E+ F+PN VK + D GY +YFSR +IPY++ KV YL
Sbjct: 125 SLAVKIHDAEELFNPNAVKVLTDKDGYVLYFSRSVIPYDRDQFXNLQDVQKVQLSDAYLR 184
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDV 282
H+GI +Y + F+K Y PT L+ E LEQL+VL NG ++ V + + A GVD ED+
Sbjct: 185 HIGIYAYRAGFIKQYVQWAPTQLENLEKLEQLRVLYNGERIHVELAKEVPAVGVDTAEDL 244
Query: 283 EKIESFM 289
EK+ + +
Sbjct: 245 EKVRAIL 251
>gi|217035411|pdb|3DUV|A Chain A, Crystal Structure Of 3-Deoxy-Manno-Octulosonate
Cytidylyltransferase From Haemophilus Influenzae
Complexed With The Substrate 3-Deoxy-Manno-Octulosonate
In The- Configuration
gi|217035412|pdb|3DUV|B Chain B, Crystal Structure Of 3-Deoxy-Manno-Octulosonate
Cytidylyltransferase From Haemophilus Influenzae
Complexed With The Substrate 3-Deoxy-Manno-Octulosonate
In The- Configuration
Length = 262
Score = 180 bits (456), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 106/247 (42%), Positives = 147/247 (59%), Gaps = 11/247 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPARFASSR GKPL +I GKP IQ +E++ L + +++ATD+E +A+ + FGA+
Sbjct: 6 IIPARFASSRLPGKPLADIKGKPXIQHVFEKA-LQSGASRVIIATDNENVADVAKSFGAE 64
Query: 113 VIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V TS + +GTER E ++KL +I+VNIQGDEPLI P I+ V L
Sbjct: 65 VCXTSVNHNSGTERLAEVVEKLAIPDNEIIVNIQGDEPLIPPVIVRQVADNLAKFNVNXA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS--------GKVNPQFPYLL 223
S AV E+ F+PN VK + D GY +YFSR +IPY++ KV YL
Sbjct: 125 SLAVKIHDAEELFNPNAVKVLTDKDGYVLYFSRSVIPYDRDQFXNLQDVQKVQLSDAYLR 184
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDV 282
H+GI +Y + F+K Y PT L+ E LEQL+VL NG ++ V + + A GVD ED+
Sbjct: 185 HIGIYAYRAGFIKQYVQWAPTQLENLEKLEQLRVLYNGERIHVELAKEVPAVGVDTAEDL 244
Query: 283 EKIESFM 289
EK+ + +
Sbjct: 245 EKVRAIL 251
>gi|85058976|ref|YP_454678.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Sodalis
glossinidius str. 'morsitans']
gi|123519657|sp|Q2NUA2.1|KDSB_SODGM RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|84779496|dbj|BAE74273.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Sodalis
glossinidius str. 'morsitans']
Length = 251
Score = 180 bits (456), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 100/247 (40%), Positives = 149/247 (60%), Gaps = 7/247 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
+ IIPARFASSR GKPL +I GKPM+ R ER++ A+ D ++VATD + + E ++ G
Sbjct: 4 IAIIPARFASSRLPGKPLADINGKPMVVRVMERAQ-ASGADRVIVATDHQGVVEAVERAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V +T ++GTER E + + + D I+VN+QGDEPLI P+II V L A
Sbjct: 63 GEVYLTRPDHQSGTERLQEVIDRYDFPDDRIIVNVQGDEPLIPPQIILQVADNLAGAEAG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSG----KVNPQFPYLLHL 225
+ + AV E+AF+PN VK VVD GYA+YFSR IP+++ G + + L H+
Sbjct: 123 MATLAVPITTAEEAFNPNAVKVVVDARGYALYFSRATIPWDREGFARSREHLSHSLLRHI 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI +Y ++F++ Y +PL+ E LEQL+VL G K+ V + GVD PE++ +
Sbjct: 183 GIYAYRADFIRRYVSWSASPLEKIEILEQLRVLWYGEKIHVAVSSVAPGMGVDTPEELAQ 242
Query: 285 IESFMRE 291
+ ++
Sbjct: 243 VRLLQQQ 249
>gi|378977984|ref|YP_005226125.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae subsp. pneumoniae HS11286]
gi|421909070|ref|ZP_16338892.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae subsp. pneumoniae ST258-K26BO]
gi|421916424|ref|ZP_16346000.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae subsp. pneumoniae ST258-K28BO]
gi|428150902|ref|ZP_18998658.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae subsp. pneumoniae ST512-K30BO]
gi|364517395|gb|AEW60523.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae subsp. pneumoniae HS11286]
gi|410116914|emb|CCM81517.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae subsp. pneumoniae ST258-K26BO]
gi|410121217|emb|CCM88625.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae subsp. pneumoniae ST258-K28BO]
gi|427539171|emb|CCM94796.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae subsp. pneumoniae ST512-K30BO]
Length = 245
Score = 180 bits (456), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 102/244 (41%), Positives = 146/244 (59%), Gaps = 7/244 (2%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPARFAS+R GKPL +I GKPMI ER++ + D ++VATD E +A + G +
Sbjct: 3 IIPARFASTRLPGKPLQDINGKPMIVHVLERAR-ESGADRIIVATDHEDVARAVEAAGGE 61
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MT ++GTER E ++K D I+VNIQGDEP+I P I+ V + L A+ +
Sbjct: 62 VCMTRADHQSGTERLAEVVEKCAFSDDTIIVNIQGDEPMIPPAIVRQVAENLAASSSGMA 121
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK----SGKVNPQFPYLLHLGI 227
+ AV E+AF+PN VK V+D GYA+YFSR IP+++ + L H+GI
Sbjct: 122 TLAVPIHDAEEAFNPNAVKVVMDAKGYALYFSRATIPWDRDRFAQSRETIGDSLLRHIGI 181
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKIE 286
Y + F++ Y P+PL+ E LEQL+VL G K+ V + + GVD PED+E++
Sbjct: 182 YGYRAGFIRRYVSWAPSPLEQIEMLEQLRVLWYGEKIHVAVAAEVPGTGVDTPEDLERVR 241
Query: 287 SFMR 290
+ +R
Sbjct: 242 AELR 245
>gi|325856875|ref|ZP_08172373.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Prevotella
denticola CRIS 18C-A]
gi|325483248|gb|EGC86225.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Prevotella
denticola CRIS 18C-A]
Length = 246
Score = 180 bits (456), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 96/240 (40%), Positives = 147/240 (61%), Gaps = 7/240 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
+GIIPAR+ASSRF GKPL + GK +I+ + ++++ L + VATDD +I FG
Sbjct: 4 IGIIPARYASSRFPGKPLAILGGKTVIEHVYR--QVSSVLTDVYVATDDPRIQNAVAAFG 61
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAV 170
+MT ++GT+R EAL K+ +D+V+NIQGDEP I+ I+ V++ + +
Sbjct: 62 GKSVMTRPDHKSGTDRICEALDKIGGSFDVVINIQGDEPFIQKSQIETVMQCFDDSRTQI 121
Query: 171 FSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ----FPYLLHLG 226
+ E A +PN K V+DN+GYA+YFSR +IP+ + GK + +P+L H+G
Sbjct: 122 ATLGKPFETIEAAQNPNSPKIVLDNNGYALYFSRSVIPFVR-GKATSEWLSTYPFLKHIG 180
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIE 286
+ +Y + L+ L + L+L E LEQL+ L+NGYK+KV D E G+D PED+++ E
Sbjct: 181 LYAYRTEVLREVSRLPQSSLELAESLEQLRWLQNGYKIKVGLTDVETIGIDTPEDLQRAE 240
>gi|424071360|ref|ZP_17808786.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas
syringae pv. avellanae str. ISPaVe037]
gi|407998969|gb|EKG39363.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas
syringae pv. avellanae str. ISPaVe037]
Length = 254
Score = 180 bits (456), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 98/246 (39%), Positives = 144/246 (58%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
++PAR+ SSRF GKPL I GKPM+Q WE++ ++ + +V+ATDD +I E CQ FGA+
Sbjct: 8 VVPARYGSSRFPGKPLKTIAGKPMVQLVWEQA-CKSSAERVVIATDDARIVEACQAFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V++T + +GT+R E +L D IVVN+QGDEP+I P +ID V L A P+A
Sbjct: 67 VLLTRDDHNSGTDRLAEVAAQLGLAADAIVVNVQGDEPMIPPAVIDQVASNLAAHPEAGM 126
Query: 172 STAVTSLKPEDA-FDPNRVKCVVDNHGYAIYFSRGLIPYNKSG------KVNPQFPYLLH 224
ST + A F+PN VK D +G A+ FSR +P+ + ++ PY H
Sbjct: 127 STLAEPIDDVAALFNPNIVKVATDINGLALTFSRAPLPWARDALAANRDQLPAGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDAPEDVE 283
+GI +Y + FL + P L+ E LEQL+ L NG ++ V ++ GVD PED+E
Sbjct: 187 IGIYAYRAGFLHDFVSWGPCWLENTESLEQLRALWNGVRIHVADALEAPPGGVDTPEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|197124687|ref|YP_002136638.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Anaeromyxobacter
sp. K]
gi|238689893|sp|B4UIT7.1|KDSB_ANASK RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|196174536|gb|ACG75509.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Anaeromyxobacter
sp. K]
Length = 242
Score = 180 bits (456), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 96/234 (41%), Positives = 141/234 (60%), Gaps = 11/234 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR+ +SRF GKPL ++ GKP+I ER+K A +D + VATDD++IA + G +
Sbjct: 7 IIPARYGASRFPGKPLADLAGKPLIAHVVERAKRARGVDVVAVATDDDRIARAVRDAGGE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFS 172
I+T + GT+R EA +KL + +IVVN+QGDEPLIEPE I+ V+ A++
Sbjct: 67 AILTGPAA-TGTDRVAEAARKLAPRPEIVVNLQGDEPLIEPEAIEAVIGAMEGG-----V 120
Query: 173 TAVTSLKPEDAFDPNR---VKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQS 229
T +P A + R VK V G A+YFSR IP+ ++G +P H+GI +
Sbjct: 121 RMATLARPLAAGELERTQVVKVVTRASGDALYFSRAPIPHRRAGGESPL--ARAHVGIYA 178
Query: 230 YDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVE 283
+ + FL+ + L P L+ EE LEQL+ LE+GY ++V + G+D P+D+E
Sbjct: 179 FTAAFLETFTALAPGRLEGEEALEQLRALEHGYDIRVADTGYRGFGIDTPDDLE 232
>gi|323492529|ref|ZP_08097677.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio
brasiliensis LMG 20546]
gi|323313316|gb|EGA66432.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio
brasiliensis LMG 20546]
Length = 250
Score = 180 bits (456), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 102/246 (41%), Positives = 144/246 (58%), Gaps = 7/246 (2%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ S+R GKPL +I GKPMIQ E++ L D +++ATDDE++ + + FG +
Sbjct: 6 VIPARYQSTRLPGKPLADIGGKPMIQWVHEQA-LQAGADKVIIATDDERVEQVVKSFGGE 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS +GTER E ++K+ D I+VN+QGDEPLI P II V L + +
Sbjct: 65 VCMTSPDHESGTERLAEVVEKMAIPDDHIIVNVQGDEPLIPPSIIAQVADNLANSQAPMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ----FPYLLHLGI 227
+ AV + F+PN VK V D GYA+YFSR IP+++ Q P + H+GI
Sbjct: 125 TLAVEIDHEAEVFNPNAVKVVTDKDGYAMYFSRATIPWDRDNFAGQQQTVAQPLMRHIGI 184
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKIE 286
+Y + F+ Y PT L+ E LEQL+VL G K+ V + + A GVD PED+E +
Sbjct: 185 YAYRAGFINTYINWQPTTLEKIECLEQLRVLWYGEKIHVEVAKEAPAAGVDTPEDLEVVR 244
Query: 287 SFMRER 292
S + R
Sbjct: 245 SIIANR 250
>gi|416065153|ref|ZP_11581829.1| LOW QUALITY PROTEIN: 3-deoxy-D-manno-octulosonate
cytidylyltransferase [Aggregatibacter
actinomycetemcomitans serotype e str. SCC393]
gi|347995359|gb|EGY36545.1| LOW QUALITY PROTEIN: 3-deoxy-D-manno-octulosonate
cytidylyltransferase [Aggregatibacter
actinomycetemcomitans serotype e str. SCC393]
Length = 227
Score = 180 bits (456), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 99/220 (45%), Positives = 138/220 (62%), Gaps = 10/220 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIP R+ASSR GKPL +I GKPMIQ +E++K + D +++ATD+E +A + FGA+
Sbjct: 7 IIPTRYASSRLPGKPLADIAGKPMIQHVFEQAK-QSGADRVIIATDNELVATAARNFGAE 65
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MT+ES +GTER E ++KL D I+VNIQGDEPLI P I+ V + L P +
Sbjct: 66 VCMTAESHHSGTERLAEVVEKLVLPDDEIIVNIQGDEPLIPPVIVKQVAENLAKYPVNMA 125
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK--------SGKVNPQFPYLL 223
S AV E+ F+PN VK + D +GY +YFSR +IP+++ + K+ YL
Sbjct: 126 SLAVKIDDAEELFNPNVVKVLTDKNGYVLYFSRAVIPWDRDQFAQIDDAAKLRLNTEYLR 185
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYK 263
H+GI +Y + F+K Y PT L+ E LEQL+VL +G K
Sbjct: 186 HIGIYAYRARFIKQYVQWQPTALEHIEKLEQLRVLWHGEK 225
>gi|343504418|ref|ZP_08742136.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio
ichthyoenteri ATCC 700023]
gi|342811927|gb|EGU46952.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio
ichthyoenteri ATCC 700023]
Length = 251
Score = 180 bits (456), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 98/245 (40%), Positives = 146/245 (59%), Gaps = 6/245 (2%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPARF S+R GKPL +I GKPM+Q +E++ + D +++ATDDE++ + + FGA
Sbjct: 6 VIPARFQSTRLPGKPLADIGGKPMVQWVYEQA-IQAGADQVIIATDDERVEQAAKAFGAQ 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS + +GTER E ++ + D I+VN+QGDEPLI P II V + L + +
Sbjct: 65 VCMTSPNHESGTERLAEVVELMGIADDHIIVNVQGDEPLIPPSIIAQVAENLANSQAPMS 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF---PYLLHLGIQ 228
+ AV + F+PN VK + D GYA+YFSR IP+++ N + P L H+GI
Sbjct: 125 TLAVEISDEAEVFNPNAVKVLTDKDGYAMYFSRATIPWDRDNFANNKTIAQPLLRHIGIY 184
Query: 229 SYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKIES 287
+Y + F+ Y P+ L+ E LEQL+VL G K+ V + + A GVD PED++ +
Sbjct: 185 AYRAGFINTYINWQPSALEKVECLEQLRVLWYGEKIHVAVAKEAPAAGVDTPEDLQAVRD 244
Query: 288 FMRER 292
+ R
Sbjct: 245 IIASR 249
>gi|425063547|ref|ZP_18466672.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pasteurella
multocida subsp. gallicida X73]
gi|404382662|gb|EJZ79120.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pasteurella
multocida subsp. gallicida X73]
Length = 258
Score = 180 bits (456), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 105/251 (41%), Positives = 150/251 (59%), Gaps = 15/251 (5%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR+AS+R GKPL I GKPMI +E++ + + ++VATD E++A + FGA+
Sbjct: 7 IIPARYASTRLPGKPLAEIAGKPMIAHVFEKA-MQSGAKRVIVATDHEQVATVARGFGAE 65
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTSE+ ++GTER E ++KL D I+VNIQGDEPLI P I+ V + L +
Sbjct: 66 VCMTSETHQSGTERLAEVVEKLGIAEDEIIVNIQGDEPLIPPAIVRQVAENLAKYQVKMA 125
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS------------GKVNPQF 219
S AV PE+ F+PN VK + D+ GY +YFSR IP+++ G++
Sbjct: 126 SLAVNITDPEELFNPNAVKVLTDHAGYVLYFSRAPIPWHRDQFASLPKEKSTRGQLVLCD 185
Query: 220 PYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDA 278
YL H+GI +Y + F+K Y P+ L+ E LEQL+VL G K+ V + + GVD
Sbjct: 186 HYLRHIGIYAYRAGFIKQYIQWQPSALEQIESLEQLRVLWYGEKIHVELAREVPPVGVDT 245
Query: 279 PEDVEKIESFM 289
ED+EK+ S +
Sbjct: 246 AEDLEKVRSIL 256
>gi|421504528|ref|ZP_15951469.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
mendocina DLHK]
gi|400344486|gb|EJO92855.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
mendocina DLHK]
Length = 254
Score = 179 bits (455), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 104/246 (42%), Positives = 145/246 (58%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+AS+R GKPL +I GKPM+Q WE+++ ++ +VVATDD +I E C+ FGA+
Sbjct: 8 VIPARYASTRLPGKPLQDIAGKPMVQHVWEQAR-KSSASRVVVATDDARIVEACKAFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V++T E +GT+R E +L D IVVN+QGDEPLI P IID V L A P A
Sbjct: 67 VLLTREDHNSGTDRLAEVATQLGLAADAIVVNVQGDEPLIPPSIIDQVAANLAANPQAGI 126
Query: 172 STAVTSLKPEDA-FDPNRVKCVVDNHGYAIYFSRGLI-----PYNKSGKVNPQ-FPYLLH 224
+T ++ A F+PN VK V D G A+ FSR + + KS V P PY H
Sbjct: 127 ATLAEPIEDVTALFNPNVVKVVADKSGLALTFSRAPLAWARDAFAKSRDVLPAGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDAPEDVE 283
+GI +Y + FL + P L+ E LEQL+ L NG ++ V ++ A GVD ED+E
Sbjct: 187 IGIYAYRAGFLHDFVAWGPCWLEDTECLEQLRALYNGVRIHVADALEAPAAGVDTAEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|220919407|ref|YP_002494711.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Anaeromyxobacter
dehalogenans 2CP-1]
gi|254807758|sp|B8JBN7.1|KDSB_ANAD2 RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|219957261|gb|ACL67645.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Anaeromyxobacter
dehalogenans 2CP-1]
Length = 242
Score = 179 bits (455), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 96/234 (41%), Positives = 141/234 (60%), Gaps = 11/234 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR+ +SRF GKPL ++ GKP+I ER++ A +D + VATDD++IA + G
Sbjct: 7 IIPARYGASRFPGKPLADLAGKPLIAHVVERAQRARGVDVVAVATDDDRIARAARDAGGQ 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFS 172
I+T + GT+R EA +KL + +IVVN+QGDEPLIEPE I+ V+ A++A
Sbjct: 67 AILTGPAA-TGTDRVAEAARKLAPRPEIVVNLQGDEPLIEPEAIEAVIGAMEAG-----V 120
Query: 173 TAVTSLKPEDAFDPNR---VKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQS 229
T +P A + R VK V G A+YFSR IP+ ++G +P H+GI +
Sbjct: 121 RMATLARPLAAGELERTQVVKVVTRASGDALYFSRAPIPHRRAGGESPL--ARAHVGIYA 178
Query: 230 YDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVE 283
+ + FL+ + L P L+ EE LEQL+ LE+GY ++V + G+D P+D+E
Sbjct: 179 FTAAFLETFTALAPGRLEGEEALEQLRALEHGYDIRVADTGYRGFGIDTPDDLE 232
>gi|334366477|ref|ZP_08515407.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Alistipes sp.
HGB5]
gi|313157287|gb|EFR56712.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Alistipes sp.
HGB5]
Length = 251
Score = 179 bits (455), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 99/248 (39%), Positives = 144/248 (58%), Gaps = 10/248 (4%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ + IIPAR+AS+RF GKPL + G+P+IQR +E ++A LD VVATDDE+I +
Sbjct: 2 KFIAIIPARYASTRFPGKPLAMLGGRPVIQRVYE--QVAGVLDDAVVATDDERIYDTVLA 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG MTS ++GT+RC EA K K YD+VVN+QGDEP + ++ V + P
Sbjct: 60 FGGRAEMTSPDHKSGTDRCWEAYLKQGKTYDVVVNVQGDEPFVRASQLEAVKRCFD-DPA 118
Query: 169 AVFSTAVTSLKPEDAFD----PNRVKCVVDNHGYAIYFSRGLIPYNKSGKVN---PQFPY 221
+T V D + PN K V+D A+YFSR +IPY + + + + +
Sbjct: 119 TDIATLVRPFAATDGLEALENPNSPKVVLDAQSRALYFSRSVIPYLRGVERSEWLARHTF 178
Query: 222 LLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPED 281
H+G+ ++ + L+ L + L+ E LEQL+ LENGYK+ V D E G+D PED
Sbjct: 179 YKHIGLYAFRTEVLRAVTALPQSALEKAESLEQLRWLENGYKIGVGVTDAETIGIDTPED 238
Query: 282 VEKIESFM 289
+EK E+F+
Sbjct: 239 LEKAEAFL 246
>gi|304437448|ref|ZP_07397406.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Selenomonas sp.
oral taxon 149 str. 67H29BP]
gi|304369498|gb|EFM23165.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Selenomonas sp.
oral taxon 149 str. 67H29BP]
Length = 244
Score = 179 bits (455), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 100/249 (40%), Positives = 144/249 (57%), Gaps = 10/249 (4%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+V+ IIPAR+AS+R GKPL +I GKPMI R +ER+ A + +VVATDDE+I ++
Sbjct: 2 KVLCIIPARYASTRLPGKPLRDIAGKPMIVRVYERAVRAQRVHEVVVATDDERIRAAVEE 61
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
G +MT GT+R E + D+++N+QGDEPLI+P +ID +V +
Sbjct: 62 HGGHAVMTRADHATGTDRLAEVAAQ-RPDCDLIINVQGDEPLIDPAVIDALVAPFEHDDA 120
Query: 169 AVFSTAVTSLK-PEDAFDPNRVKCVVDNHGYAIYFSRGLIPY--NKSGKVNPQFPYLLHL 225
+ +TA T + + +PN VK V D G A+YFSR IPY N KV H+
Sbjct: 121 LMMATAKTEITDAAEMENPNNVKVVTDRTGNALYFSRARIPYARNMGAKVYK------HI 174
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKI 285
GI +Y +FL Y + T L+ E LEQL+ LENGY+++V++ D GVD ED+ +
Sbjct: 175 GIYAYRRDFLLAYAKMVQTELECSESLEQLRALENGYRIRVVETDAVFIGVDTEEDLAAV 234
Query: 286 ESFMRERNL 294
+ + R L
Sbjct: 235 NAEYQRRGL 243
>gi|300716089|ref|YP_003740892.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Erwinia billingiae
Eb661]
gi|299061925|emb|CAX59041.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Erwinia billingiae
Eb661]
Length = 248
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 101/246 (41%), Positives = 149/246 (60%), Gaps = 7/246 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPARFAS+R GKPLV+I GKPM+ ER+ L + D ++VATD+E++A + G
Sbjct: 4 VAIIPARFASTRLPGKPLVDIQGKPMVVHVMERA-LESGADRVIVATDNEQVARAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT +GTER E + + + D I+VN+QGDEP+I P II V + L +
Sbjct: 63 GEVCMTRADHHSGTERLAEVIDRYQFADDTIIVNVQGDEPMIPPVIIRQVAENLAKSEAG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK----SGKVNPQFPYLLHL 225
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ + + +L H+
Sbjct: 123 MATLAVPIETAEEAFNPNAVKVVMDAKGYALYFSRATIPWDRERFAASREEIGDTFLRHI 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI Y + F++ Y P+PL+ E LEQL+VL G K+ V + + GVD PED+ +
Sbjct: 183 GIYGYRAGFIRRYVSWEPSPLEHIELLEQLRVLWYGEKIHVAVAKAIPSVGVDTPEDLAR 242
Query: 285 IESFMR 290
+ + M+
Sbjct: 243 VRAAMQ 248
>gi|421263592|ref|ZP_15714624.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pasteurella
multocida subsp. multocida str. P52VAC]
gi|401689349|gb|EJS84808.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pasteurella
multocida subsp. multocida str. P52VAC]
Length = 258
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 105/251 (41%), Positives = 150/251 (59%), Gaps = 15/251 (5%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR+AS+R GKPL I GKPMI +E++ + + ++VATD E++A + FGA+
Sbjct: 7 IIPARYASTRLPGKPLAEIAGKPMIAHVFEKA-MQSGAKRVIVATDHEQVATVARGFGAE 65
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTSE+ ++GTER E ++KL D I+VNIQGDEPLI P I+ V + L +
Sbjct: 66 VCMTSETHQSGTERLAEVVEKLGIAEDEIIVNIQGDEPLIPPAIVRQVAENLAKYEVKMA 125
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS------------GKVNPQF 219
S AV PE+ F+PN VK + D+ GY +YFSR IP+++ G++
Sbjct: 126 SLAVNITDPEELFNPNAVKVLTDHAGYVLYFSRAPIPWHRDQFASLPKEKSTRGQLVLCD 185
Query: 220 PYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDA 278
YL H+GI +Y + F+K Y P+ L+ E LEQL+VL G K+ V + + GVD
Sbjct: 186 HYLRHIGIYAYRAGFIKQYIQWQPSALEQIESLEQLRVLWYGEKIHVELAREVPPVGVDT 245
Query: 279 PEDVEKIESFM 289
ED+EK+ S +
Sbjct: 246 AEDLEKVRSIL 256
>gi|290510660|ref|ZP_06550030.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Klebsiella sp.
1_1_55]
gi|289777376|gb|EFD85374.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Klebsiella sp.
1_1_55]
Length = 248
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 102/246 (41%), Positives = 148/246 (60%), Gaps = 7/246 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPARFAS+R GKPL +I GKPMI ER++ A+ D ++VATD +A + G
Sbjct: 4 VVIIPARFASTRLPGKPLQDINGKPMIVHVLERAR-ASGADRIIVATDHPDVASAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D I+VNIQGDEP+I P I+ V + L ++
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCAFSDDTIIVNIQGDEPMIPPAIVRQVAENLASSSSG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP----YLLHL 225
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ + + L H+
Sbjct: 123 MATLAVPIHDAEEAFNPNAVKVVMDAQGYALYFSRATIPWDRDRFAHSRETIGDSLLRHI 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI Y + F++ Y P+PL+ E LEQL+VL G K+ V + + GVD PED+E+
Sbjct: 183 GIYGYRAGFIRRYVSWAPSPLEQIEMLEQLRVLWYGEKIHVAVAAEVPGTGVDTPEDLER 242
Query: 285 IESFMR 290
+ + +R
Sbjct: 243 VRAELR 248
>gi|238927533|ref|ZP_04659293.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Selenomonas
flueggei ATCC 43531]
gi|238884815|gb|EEQ48453.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Selenomonas
flueggei ATCC 43531]
Length = 248
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 98/247 (39%), Positives = 142/247 (57%), Gaps = 6/247 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+V+ IIPAR+AS+R GKPL +I GKPMI R +ER+ A + +VVATDDE+I ++
Sbjct: 2 KVLCIIPARYASTRLPGKPLRDIAGKPMIVRVYERAVQAQRVHEVVVATDDERIRAAVEE 61
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
G +MT GT+R E + D+++N+QGDEPLI+P +ID +V +
Sbjct: 62 HGGHAVMTRADHATGTDRLAEVAAQ-RPDCDLIINVQGDEPLIDPAVIDALVAPFEHDDA 120
Query: 169 AVFSTAVTSLK-PEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+ +TA T + + +PN VK V D G A+YFSR IPY + N H+GI
Sbjct: 121 LMMATAKTEITDAAEMENPNNVKVVTDRTGNALYFSRARIPYAR----NVGAKVYKHIGI 176
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
+Y +FL Y + T L+ E LEQL+ LENGY++ V++ D GVD ED+ + +
Sbjct: 177 YAYRRDFLLTYAKMQQTELECSESLEQLRALENGYRIHVVETDAVFIGVDTEEDLAAVNA 236
Query: 288 FMRERNL 294
R + L
Sbjct: 237 EYRRQGL 243
>gi|315126705|ref|YP_004068708.1| CTP:CMP-3-deoxy-D-manno-octulosonate transferase [Pseudoalteromonas
sp. SM9913]
gi|315015219|gb|ADT68557.1| CTP:CMP-3-deoxy-D-manno-octulosonate transferase [Pseudoalteromonas
sp. SM9913]
Length = 254
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/251 (41%), Positives = 154/251 (61%), Gaps = 12/251 (4%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V +IPAR+AS+R GKPL +I GKPMIQ +E++ L+ +V+ATD +K+ + + F
Sbjct: 4 VVVIPARYASTRLPGKPLADICGKPMIQHVYEKACLSGA-SKVVIATDHQKVFDAAKHFT 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKAL--QAAP 167
DV+MT E ++GTER E + L D IVVN+QGDEPL+ P+ + V L AP
Sbjct: 63 NDVLMTREDHQSGTERLAEVVDLLNLSEDTIVVNVQGDEPLLSPDNVSQVATLLAQSTAP 122
Query: 168 DAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLL---- 223
A S A+ + ++ F+PN VK V D + A+YFSR IP+++S + Q P L
Sbjct: 123 MATLSVAIE--ERDEVFNPNAVKVVSDINKNALYFSRASIPFDRSAMMAEQQPLNLAPFQ 180
Query: 224 -HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAH-GVDAPED 281
H+GI +Y + F+K Y L +PL++ E LEQL+VL +GY +K+ + H GVD PED
Sbjct: 181 RHVGIYAYRAGFIKQYIQLSVSPLEVLESLEQLRVLYHGYAIKIEQTLVTPHAGVDTPED 240
Query: 282 VEKIESFMRER 292
+ K+ + ++ +
Sbjct: 241 LAKVVAHIQSK 251
>gi|399994564|ref|YP_006574804.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Phaeobacter
gallaeciensis DSM 17395 = CIP 105210]
gi|398659119|gb|AFO93085.1| 3-deoxy-manno-octulosonate cytidylyltransferase KdsB [Phaeobacter
gallaeciensis DSM 17395 = CIP 105210]
Length = 266
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 101/258 (39%), Positives = 146/258 (56%), Gaps = 18/258 (6%)
Query: 50 VVGIIPARFASSRFEGKPLVNILG-----KPMIQRTWERSKLATTLDHLVVATDDEKIAE 104
V+ +IPAR+AS+R+ GKPLV + G + +I+R+W + +D +VVATDDE+I
Sbjct: 3 VLIVIPARYASTRYPGKPLVALTGASGESQTLIERSWRAAMAVNGVDRVVVATDDERIRG 62
Query: 105 CCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQ 164
FGA+V+MTSESC NGTERC EAL LE YDIVVN+QGD PL ++ ++ L+
Sbjct: 63 AATGFGAEVVMTSESCGNGTERCAEALATLEGGYDIVVNLQGDAPLTPHWFVEDLISGLR 122
Query: 165 AAPDAVFSTAV---------TSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSG-K 214
APD +T V + L A V A+YFS+ ++P+ + +
Sbjct: 123 DAPDKGLATPVLRCDGATLNSLLADRKAGRVGGTTAVFGRDNNALYFSKEVVPFTSTAYE 182
Query: 215 VNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVD---H 271
+ P H+G+ +Y + L YPG PL+ E LEQL+ LENG K+ ++V+
Sbjct: 183 ADQDTPVFHHVGVYAYRPDALSAYPGWPVGPLETLEGLEQLRFLENGRKILCVEVEARGR 242
Query: 272 EAHGVDAPEDVEKIESFM 289
E ++ PEDV IE+ M
Sbjct: 243 EFWELNNPEDVPLIEAMM 260
>gi|325269735|ref|ZP_08136346.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Prevotella
multiformis DSM 16608]
gi|324987936|gb|EGC19908.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Prevotella
multiformis DSM 16608]
Length = 277
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 94/241 (39%), Positives = 146/241 (60%), Gaps = 5/241 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR+ SSRF GKPL + GK +I+ + ++++ L+ + VATDD +I + Q
Sbjct: 33 KFIGIIPARYGSSRFPGKPLAMLGGKKVIEHVYR--QVSSVLEDVYVATDDPRIHDAVQA 90
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG +MT ++GT+R EAL K+ +++VVNIQGDEP I+ I+ V+
Sbjct: 91 FGGKAVMTRSDHKSGTDRICEALDKIGGDFEVVVNIQGDEPFIQKSQIETVMCCFDDPRT 150
Query: 169 AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVN---PQFPYLLHL 225
+ + E A +PN K V+DN GYA+YFSR +IP+ + + + +P+L H+
Sbjct: 151 QIATLGKPFETFEAARNPNSPKIVLDNDGYALYFSRSVIPFVRGKETSEWLSSYPFLKHI 210
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKI 285
G+ +Y + L+ L + L+L E LEQL+ L+NGYK+KV D E G+D PED+++
Sbjct: 211 GLYAYRTEVLREVSSLPQSSLELAESLEQLRWLQNGYKIKVGLTDVETIGIDTPEDLQRA 270
Query: 286 E 286
E
Sbjct: 271 E 271
>gi|303230947|ref|ZP_07317690.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Veillonella
atypica ACS-049-V-Sch6]
gi|302514329|gb|EFL56328.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Veillonella
atypica ACS-049-V-Sch6]
Length = 243
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/230 (40%), Positives = 136/230 (59%), Gaps = 4/230 (1%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPARF S+R GKPL +I GKPMIQR +ER A ++VATDD+++ + + FG
Sbjct: 6 VIPARFGSTRLPGKPLADIAGKPMIQRVYERVTQAKKPQVVIVATDDQRVYDAVKSFGGT 65
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFS 172
V+MT + GT+R E Q+ D+++N+QGDEP+I+ +ID + + + +
Sbjct: 66 VVMTDANHPTGTDRLAEVAQQY-TDLDVIINVQGDEPMIDAHLIDQLGELFEDDAHLQMA 124
Query: 173 TAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDS 232
T T L E+ +P+ VK +++ A+YFSR LIPY + VN L H+GI +Y
Sbjct: 125 TVATPLLKEEYDEPSAVKVILNKRNDAMYFSRSLIPYPRHDFVNAP---LKHIGIYAYRR 181
Query: 233 NFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDV 282
FL Y + PT + E LEQL+ LENG+ ++VI D GVD PED+
Sbjct: 182 QFLLDYAKMEPTAAEQTESLEQLRALENGFSIRVITTDKRFVGVDTPEDL 231
>gi|337755509|ref|YP_004648020.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Francisella sp.
TX077308]
gi|336447114|gb|AEI36420.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Francisella sp.
TX077308]
Length = 250
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 105/246 (42%), Positives = 144/246 (58%), Gaps = 13/246 (5%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR S+R GK L +I GKPMIQR +E+ + +++ATD E+I E ++FGA
Sbjct: 7 VIPARLKSTRLPGKMLADIAGKPMIQRVYEKVA-KSKFKSIIIATDSEEIKEVAEKFGAK 65
Query: 113 VIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
VI+T + +GT+R EA+ KL DIVVN+QGDEPLI E I+ + L P AV
Sbjct: 66 VILTGDDHESGTDRIAEAVTKLGFADEDIVVNVQGDEPLIPIENIEQAAQLLIEKPQAVV 125
Query: 172 STAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP---YLLHLGI 227
ST + +P D ++PN VK V D + YA+YFSR IP+ + N Q + H+GI
Sbjct: 126 STLCERITEPGDIYNPNNVKVVFDKNNYALYFSRASIPFERGFSENHQVSVSEFFRHIGI 185
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAH----GVDAPEDVE 283
+Y FLK Y L +P++ E LEQL+VL NGYK I V+ A GVD +D+E
Sbjct: 186 YTYRVGFLKHYAELEISPIEKYEALEQLRVLYNGYK---IAVEQSAKPTPAGVDTLQDLE 242
Query: 284 KIESFM 289
K+
Sbjct: 243 KVRKLF 248
>gi|254229013|ref|ZP_04922434.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio sp. Ex25]
gi|262394755|ref|YP_003286609.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio sp. Ex25]
gi|451970241|ref|ZP_21923468.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio
alginolyticus E0666]
gi|151938481|gb|EDN57318.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio sp. Ex25]
gi|262338349|gb|ACY52144.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio sp. Ex25]
gi|451933755|gb|EMD81422.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio
alginolyticus E0666]
Length = 251
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 102/247 (41%), Positives = 148/247 (59%), Gaps = 9/247 (3%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IP+R+ASSR GKPL +I GKPM+Q +E++ A D ++VATDDE++A+ FG
Sbjct: 6 VIPSRYASSRLPGKPLADIGGKPMVQWVYEQALQAGAED-VIVATDDERVADAVSSFGGK 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS + +GTER E ++K+ D I+VN+QGDEPLI P II V L +
Sbjct: 65 VCMTSPNHESGTERLAEVVEKMAIPADHIIVNVQGDEPLIPPSIIRQVADNLSGCDAPMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYN-----KSGKVNPQFPYLLHLG 226
+ AV E+ F+PN VK V + GYA+YFSR IP++ K K+ P + H+G
Sbjct: 125 TLAVEIDSEEEVFNPNAVKVVANEQGYAMYFSRATIPWDRDNFAKQDKIIAN-PLMRHIG 183
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKI 285
I +Y + F+ Y P+ L+ E LEQL+VL G K+ V + + A GVD PED+E +
Sbjct: 184 IYAYRAGFINTYVNWAPSALEQIECLEQLRVLWYGEKIHVAVAKEAPAAGVDTPEDLEAV 243
Query: 286 ESFMRER 292
+ + ++
Sbjct: 244 RAIVAKQ 250
>gi|183219624|ref|YP_001837620.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
gi|189909763|ref|YP_001961318.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Ames)']
gi|226724296|sp|B0SA58.1|KDSB_LEPBA RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|226724297|sp|B0SK97.1|KDSB_LEPBP RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|167774439|gb|ABZ92740.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Ames)']
gi|167778046|gb|ABZ96344.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
Length = 246
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 104/247 (42%), Positives = 144/247 (58%), Gaps = 6/247 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+++G+IPARFAS+RF GKPL I KPMIQ T+ + L+ + LVVATDD++I +
Sbjct: 4 QILGVIPARFASTRFPGKPLALIGTKPMIQWTYHHASLSKSFHRLVVATDDKRIHDVVLG 63
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG + ++TS GT+R E + Y I+VNIQGDEP +E +IDGVV +
Sbjct: 64 FGGESVLTSPDHPTGTDRIIEVAETY-PNYGIIVNIQGDEPGMEASLIDGVVGLKTKHRN 122
Query: 169 AVFST-AVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+T AV ED DPN+VK V DN G A YFSR IP + G+ Y HLGI
Sbjct: 123 WEMTTAAVPFTSAEDPKDPNKVKVVFDNKGRANYFSRSPIPASFKGEAK----YHRHLGI 178
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
+Y+ +FL Y L P+ + E LEQL+ L+NG + V D GVD+P D+E + +
Sbjct: 179 YAYERDFLMNYNQLPPSDWETVESLEQLRALQNGSTIGVYLSDKANLGVDSPADLEVVIT 238
Query: 288 FMRERNL 294
+++ L
Sbjct: 239 EFKKKGL 245
>gi|296121968|ref|YP_003629746.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Planctomyces
limnophilus DSM 3776]
gi|296014308|gb|ADG67547.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Planctomyces
limnophilus DSM 3776]
Length = 251
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 99/250 (39%), Positives = 142/250 (56%), Gaps = 6/250 (2%)
Query: 46 FRSRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAEC 105
++ G+IPAR AS+R GK L+N GKP++Q WER D L++ATD +I+E
Sbjct: 1 MHQKICGVIPARLASTRLPGKMLLNQTGKPLLQHVWERVAATELFDELIIATDSTEISEV 60
Query: 106 CQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQA 165
Q FGA V MT E +GT+R E L++ +++IVVN+QGDEP I+ I V+++L A
Sbjct: 61 AQAFGAHVEMTGEHA-SGTDRVAEVLRRRADQFEIVVNVQGDEPEIDRGHISKVIESLLA 119
Query: 166 APDAVFSTAVTSLKPEDAFDPNR-VKCVVDNHGYAIYFSRGLIPYNKSG----KVNPQFP 220
P A ST L+ ++ VK V D G A+YFSR +IP + G + P
Sbjct: 120 VPKAQMSTLAAPLRRWESIAATSCVKVVTDATGRALYFSRSVIPCPRDGFDESMLVGHSP 179
Query: 221 YLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPE 280
+ LH+GI + ++FL +PL+ E LEQL+ LE G ++V VDH + G+D PE
Sbjct: 180 WRLHVGIYGFRTDFLLQLTTWPQSPLEKLEKLEQLRALEAGVHIQVADVDHPSVGIDTPE 239
Query: 281 DVEKIESFMR 290
D + MR
Sbjct: 240 DYAQFVERMR 249
>gi|422640283|ref|ZP_16703710.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
syringae Cit 7]
gi|330952674|gb|EGH52934.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
syringae Cit 7]
Length = 254
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 99/246 (40%), Positives = 144/246 (58%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ SSRF GKPL I GKPM+Q WE++ ++ + +VVATDD +I E CQ FGA+
Sbjct: 8 VIPARYGSSRFPGKPLKTIAGKPMVQLVWEQA-CKSSAERVVVATDDARIVEACQAFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V++T + +GT+R E +L D IVVN+QGDEP+I P +I+ V L A P+A
Sbjct: 67 VLLTRDDHNSGTDRLAEVAAQLGLAADAIVVNVQGDEPMIPPAVINQVASNLAAHPEAGM 126
Query: 172 STAVTSLKPEDA-FDPNRVKCVVDNHGYAIYFSRGLIPYNKSG------KVNPQFPYLLH 224
ST + A F+PN VK D +G A+ FSR +P+ + ++ PY H
Sbjct: 127 STLAEPIDDVAALFNPNIVKVATDINGLALTFSRAPLPWARDALAANRDQLPAGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDAPEDVE 283
+GI +Y + FL + P L+ E LEQL+ L NG ++ V ++ GVD PED+E
Sbjct: 187 IGIYAYRAGFLHDFVSWGPCWLENTESLEQLRALWNGVRIHVADALEAPPGGVDTPEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|380695536|ref|ZP_09860395.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bacteroides faecis
MAJ27]
Length = 250
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 99/255 (38%), Positives = 149/255 (58%), Gaps = 16/255 (6%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR+AS+RF KPL + GK +IQR +E ++ LD VATDDE+I +
Sbjct: 2 KFLGIIPARYASTRFPAKPLAMLGGKTVIQRVYE--QVTGVLDDAYVATDDERIEAAVKA 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG V+MTS ++GT+RC EA K+ +D++VNIQGDEP I+P ++ V + +
Sbjct: 60 FGGKVVMTSVDHKSGTDRCYEACTKIGGDFDVIVNIQGDEPFIQPSQLNAVKACFEDSTT 119
Query: 169 AVFSTAVTSLKPEDAFDP-------NRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF-- 219
+ T +KP A +P N K VV+ + A+YFSR +IPY ++
Sbjct: 120 QI----ATLVKPFTADEPFAVLENVNSPKVVVNKNWNALYFSRSIIPYQRNADREDWLKG 175
Query: 220 -PYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDA 278
Y H+G+ +Y + L+ L + L+L E LEQL+ LENGYK+KV + E G+D
Sbjct: 176 HTYYKHIGLYAYRTEVLREITALPQSSLELAESLEQLRWLENGYKIKVGISEVETIGIDT 235
Query: 279 PEDVEKIESFMRERN 293
P+D++ E F++ R+
Sbjct: 236 PQDLKHAEEFLKNRS 250
>gi|445495553|ref|ZP_21462597.1| 3-deoxy-manno-octulosonate cytidylyltransferase KdsB
[Janthinobacterium sp. HH01]
gi|444791714|gb|ELX13261.1| 3-deoxy-manno-octulosonate cytidylyltransferase KdsB
[Janthinobacterium sp. HH01]
Length = 252
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/250 (41%), Positives = 147/250 (58%), Gaps = 12/250 (4%)
Query: 48 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQ 107
S + IIPAR AS+R KPL ++ GKPM+ R ER++LA ++VATD E I C+
Sbjct: 5 SPFIAIIPARLASTRLPNKPLADLGGKPMVVRVAERAQLAGAA-RVIVATDHEDIRAACE 63
Query: 108 QFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAA 166
Q G +V MT +GT+R E + L D +VVN+QGDEPLI+PE++ AL+ +
Sbjct: 64 QHGVEVCMTRADHPSGTDRIAEVARALNLPADAVVVNLQGDEPLIDPELLQAA--ALRIS 121
Query: 167 PDAVFSTAVTSLK-PEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ------F 219
+ ST L DAF+PN VK V+D G A+YFSR IP+++ + +
Sbjct: 122 AEVPMSTCAHPLHDAADAFNPNVVKVVLDKTGRALYFSRATIPWHRDAFAQSKDALPAGY 181
Query: 220 PYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHE-AHGVDA 278
L H+G+ +Y ++FL+ YP L +PL+ E LEQL+VL +GY + V D A GVD
Sbjct: 182 VPLRHIGLYAYRNDFLQAYPALEVSPLEAIEALEQLRVLWHGYPIAVHVTDSAPAAGVDT 241
Query: 279 PEDVEKIESF 288
PED+ ++ F
Sbjct: 242 PEDLARVRQF 251
>gi|423094239|ref|ZP_17082035.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas
fluorescens Q2-87]
gi|397887898|gb|EJL04381.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas
fluorescens Q2-87]
Length = 254
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 102/246 (41%), Positives = 147/246 (59%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IP+RFAS+R GKPL+ I GKPMIQ WE++ ++ +VVATDD +I E C+ FGA+
Sbjct: 8 VIPSRFASTRLPGKPLLVIAGKPMIQHVWEQAS-KSSAQRVVVATDDARIVEACKGFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V++T E +GT+R E KL D IVVN+QGDEPLI P +ID V L A +A
Sbjct: 67 VVLTREDHNSGTDRLAEVAAKLGLAPDAIVVNVQGDEPLIPPSVIDQVAANLAAHTEARM 126
Query: 172 STAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK-----SGKVNPQ-FPYLLH 224
+T ++ + F+PN VK V D +G A+ FSR +P+ + S V P+ PY H
Sbjct: 127 ATLAEPIEDVQTLFNPNVVKVVSDLNGLALTFSRATLPWARDAFAQSRDVMPEGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDAPEDVE 283
+GI +Y + FL+ + P L+ E LEQL+ L +G ++ V + GVD PED+E
Sbjct: 187 IGIYAYRAGFLQDFVAWGPCWLENTESLEQLRALWHGVRIHVADALIAPPTGVDTPEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|262404223|ref|ZP_06080778.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio sp. RC586]
gi|262349255|gb|EEY98393.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio sp. RC586]
Length = 251
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 98/247 (39%), Positives = 150/247 (60%), Gaps = 7/247 (2%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ S+R GKPL +I GKPM+Q +E++ A D +++ATDD+++ + FG
Sbjct: 6 VIPARYQSTRLPGKPLADIGGKPMVQWVYEQAMQAGA-DRVIIATDDQRVEQAVHVFGGM 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS ++GTER E ++K+ + IVVN+QGDEPLI P II V L A +
Sbjct: 65 VCMTSPDHQSGTERLAEVVEKMAIPAEHIVVNVQGDEPLIPPAIIRQVADNLAACSAPMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS--GKVNPQF--PYLLHLGI 227
+ AV + F+PN VK + D +GYA+YFSR IP+++ K + P L H+GI
Sbjct: 125 TLAVEIEDEAEVFNPNAVKVITDKNGYALYFSRATIPWDRDNFAKADKSIAQPLLRHIGI 184
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKIE 286
+Y + F+ Y P+PL+ E LEQL+VL +G K+ V + ++ GVD P+D+E +
Sbjct: 185 YAYRAGFINTYLHWQPSPLEKIECLEQLRVLWHGEKIHVAVALEAPPAGVDTPDDLEVVR 244
Query: 287 SFMRERN 293
F+ +++
Sbjct: 245 KFVAQQH 251
>gi|262275606|ref|ZP_06053415.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Grimontia hollisae
CIP 101886]
gi|262219414|gb|EEY70730.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Grimontia hollisae
CIP 101886]
Length = 250
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/248 (41%), Positives = 153/248 (61%), Gaps = 9/248 (3%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
R +IPAR+ASSR KPLV+I GKPMIQ +E++ + + + +++ATDD++I +
Sbjct: 2 RFTVVIPARYASSRLPAKPLVDIGGKPMIQWVYEQA-IKSGAERVIIATDDQRIVDAANA 60
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAP 167
FG +V MT E ++GTER E ++K + D I+VN+QGDEPLI P +I V + L A
Sbjct: 61 FGGEVCMTREDHQSGTERLAEVVEKYGLEADEIIVNVQGDEPLIPPSVIRQVAENL-ARS 119
Query: 168 DAVFSTAVTSLKPED-AFDPNRVKCVVDNHGYAIYFSRGLIPYNKS--GKVNPQFPYLL- 223
DA ST ++ +D F+PN VK V D GYA+YFSR IP+++ KV + L
Sbjct: 120 DAPMSTLAVNIDHQDEVFNPNAVKVVTDKDGYALYFSRATIPWDRDNFAKVPAEIHQNLK 179
Query: 224 -HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPED 281
H+GI Y + F+K Y P+P++ E LEQL+VL G K+ V + V+ GVD PED
Sbjct: 180 RHIGIYGYRAGFIKTYINWAPSPIEHIECLEQLRVLWYGEKIHVDVAVEAPPPGVDTPED 239
Query: 282 VEKIESFM 289
++ + ++
Sbjct: 240 LDVVRKWV 247
>gi|393788031|ref|ZP_10376162.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bacteroides nordii
CL02T12C05]
gi|392656244|gb|EIY49883.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bacteroides nordii
CL02T12C05]
Length = 250
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 99/251 (39%), Positives = 147/251 (58%), Gaps = 10/251 (3%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR+AS+RF KPL + GK +IQR +E ++A LD VATDD +I +
Sbjct: 2 KFIGIIPARYASTRFPAKPLAILGGKTVIQRVYE--QVAGILDDAYVATDDVRIEAAVKA 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG V+MTS ++GT+RC EA K+ +D+VVNIQGDEP I+P + + + A
Sbjct: 60 FGGKVVMTSVEHKSGTDRCYEAATKIGGNFDVVVNIQGDEPFIQPSQLQAIKACFEDATT 119
Query: 169 AVFSTAVTSLKPEDAF----DPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF---PY 221
+ +T V DAF + N K VV+ + A+YFSR +IPY + + + Y
Sbjct: 120 QI-ATLVKPFDTNDAFETLENANSPKVVVNKNWNALYFSRSVIPYLRGVEKSEWLQNHTY 178
Query: 222 LLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPED 281
H+G+ +Y + LK L + L+L E LEQL+ LENGY +KV + E G+D P+D
Sbjct: 179 YKHIGLYAYRTEILKEITSLPQSSLELAESLEQLRWLENGYTIKVGVSEVETIGIDTPQD 238
Query: 282 VEKIESFMRER 292
+ + E F++ +
Sbjct: 239 LARAEEFLKNK 249
>gi|104780772|ref|YP_607270.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
entomophila L48]
gi|166220468|sp|Q1ICZ9.1|KDSB_PSEE4 RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|95109759|emb|CAK14464.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
entomophila L48]
Length = 254
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 98/246 (39%), Positives = 143/246 (58%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR S+R GKPL+ I GKPM+Q WE+++ + +V+ATDD I E C+ FGA+
Sbjct: 8 VIPARLRSTRLPGKPLLPIAGKPMVQHVWEQARRSGA-SRVVIATDDASIVEACRAFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V++T +GT+R E +L D IVVN+QGDEPLI P IID V L P+A
Sbjct: 67 VLLTRADHESGTDRLAEVAAQLGLAPDAIVVNVQGDEPLIPPVIIDQVAANLADHPEAGI 126
Query: 172 STAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSG------KVNPQFPYLLH 224
+T + +PE F+PN VK V D HG A+ FSR +P+ + ++ PY H
Sbjct: 127 ATLAEPIHEPETIFNPNAVKVVSDKHGLALTFSRAPLPWARDAFAKDRSQLPVGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDAPEDVE 283
+G+ +Y FL+ + P L+ E LEQL+ L +G ++ V ++ A GVD PED+E
Sbjct: 187 IGMYAYRVGFLQDFVAWGPCWLEQTESLEQLRALWHGVRIHVADAIEAPAVGVDTPEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|328953204|ref|YP_004370538.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Desulfobacca
acetoxidans DSM 11109]
gi|328453528|gb|AEB09357.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Desulfobacca
acetoxidans DSM 11109]
Length = 246
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 97/247 (39%), Positives = 144/247 (58%), Gaps = 4/247 (1%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
++V IIPAR+ SSRF GKPL I GKPMIQ +E++ L + VATDD++I C
Sbjct: 2 QIVAIIPARYDSSRFPGKPLALIAGKPMIQWVYEQAGQVPDLSEIYVATDDDRIGRCVHS 61
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAP 167
FG I+TS++ +G++R EA + + + +VVNIQGD+P+ P +I V+ L P
Sbjct: 62 FGGKYILTSKNHLSGSDRLAEAAEIIGLSQEALVVNIQGDQPVFPPSLITQVIAPLLQEP 121
Query: 168 DAVFSTAVTSLK-PEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLG 226
+ +T + L P A +PN VK V D+ +A+YFSR IP+ + + Y H+G
Sbjct: 122 ETDMATPIRQLSDPAAAVNPNIVKVVFDHRNFALYFSRSPIPHYRDDTQDAV--YYKHIG 179
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIE 286
I Y FL+ + L P + E LEQL+ LE+G+ +KV+K E VD PED+ ++E
Sbjct: 180 IYVYRHEFLQRFVQLPPGIWETAEKLEQLRALEHGHPIKVVKTTGETLEVDVPEDLARVE 239
Query: 287 SFMRERN 293
++ R
Sbjct: 240 DYLNRRG 246
>gi|53729232|ref|ZP_00133756.2| COG1212: CMP-2-keto-3-deoxyoctulosonic acid synthetase
[Actinobacillus pleuropneumoniae serovar 1 str. 4074]
gi|126209041|ref|YP_001054266.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
gi|226724089|sp|A3N2M5.1|KDSB2_ACTP2 RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase 2;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase 2; Short=CKS 2; Short=CMP-KDO synthase 2
gi|126097833|gb|ABN74661.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
Length = 252
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/248 (41%), Positives = 148/248 (59%), Gaps = 9/248 (3%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR+AS+R KPL++ILGKPMIQ WER+K A +++ATD +IAE +FG +
Sbjct: 6 IIPARYASTRLPRKPLLDILGKPMIQHVWERAKQAGG-HRVIIATDHSEIAEVVTRFGGE 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V +TS+ +GTER E + K+ D I+VN+QGDEPLI P II V + L +
Sbjct: 65 VCLTSDKHSSGTERLAEVVSKMNISDDEIIVNVQGDEPLIPPCIIKQVAENLDNHQVNMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK------SGKVNPQFPYLLHL 225
+ AV + ++ F+PN VK + D +G A+YFSR IP+ + S Q YL H+
Sbjct: 125 TLAVKLTQRDELFNPNVVKVLSDKNGMALYFSRAAIPFARDNFPDCSDDFVTQNQYLRHI 184
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI +Y + F+K Y PT L+ E LEQL+ L NG K+ + I ++ GVD ED+E+
Sbjct: 185 GIYAYRAGFIKQYVQWQPTALEQLESLEQLRALWNGEKIHLDIALETPEVGVDTQEDLER 244
Query: 285 IESFMRER 292
+ + +
Sbjct: 245 VRLILSNK 252
>gi|149378077|ref|ZP_01895799.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Marinobacter
algicola DG893]
gi|149357646|gb|EDM46146.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Marinobacter
algicola DG893]
Length = 265
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 106/255 (41%), Positives = 144/255 (56%), Gaps = 15/255 (5%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+AS+R GKPL ++ GKPMI+ +ER+ + +V+ATDDE+I C FGA+
Sbjct: 6 VIPARYASTRLPGKPLADLAGKPMIEHVYERA-CESQAGRVVIATDDERIESACAAFGAE 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V+MTS +GT+R E +KL D VVN+QGDEPLI PE+ID V L+A PDAV
Sbjct: 65 VVMTSADHASGTDRLEEVARKLGFGPDNRVVNVQGDEPLIPPELIDQVAANLEAHPDAVI 124
Query: 172 STAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK-----SGKVNP--QFP--- 220
+T + F+PN VK V DN G A YFSR IP+ + SG P
Sbjct: 125 ATLCERIPDVTSVFNPNVVKVVFDNRGMAHYFSRAPIPWARDTWQGSGDTGAARSLPEGC 184
Query: 221 -YLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKV-DHEAHGVDA 278
Y H+GI Y + L+ + P P ++ E LEQL+ L NG ++ V + GVD
Sbjct: 185 DYYRHIGIYGYRVSLLRNFVTWAPAPTEITESLEQLRALYNGARIHVEEACRMPPAGVDT 244
Query: 279 PEDVEKIESFMRERN 293
ED+E++ M R
Sbjct: 245 AEDLERLRQIMMTRQ 259
>gi|393783929|ref|ZP_10372098.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bacteroides
salyersiae CL02T12C01]
gi|392667588|gb|EIY61095.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bacteroides
salyersiae CL02T12C01]
Length = 250
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/253 (40%), Positives = 152/253 (60%), Gaps = 18/253 (7%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR+AS+RF KPL + GK +IQR +E ++A LD VATDDE+I +
Sbjct: 2 KFLGIIPARYASTRFPAKPLAMLGGKTVIQRVYE--QVAGVLDDAYVATDDERIEAAVKA 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG V+MTS ++GT+RC EA+ K+ + +D++VNIQGDEP I+P + A++A D
Sbjct: 60 FGGKVVMTSVHHKSGTDRCYEAMVKIGQGFDVIVNIQGDEPFIQPSQL----HAIKACFD 115
Query: 169 AVFSTAVTSLKPEDAFDP-------NRVKCVVDNHGYAIYFSRGLIPY----NKSGKVNP 217
+ T +KP A P N K VV + A+YFSR +IPY +KS +
Sbjct: 116 DAATQIATLVKPFSADTPLEALENANSPKVVVSANWNALYFSRSVIPYLRGVDKSEWLR- 174
Query: 218 QFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVD 277
+ + H+G+ +Y + LK L + L+L E LEQL+ LENGY +KV + E G+D
Sbjct: 175 RHTFYKHIGLYAYRAEVLKEITSLPQSSLELAESLEQLRWLENGYTIKVGISEVETIGID 234
Query: 278 APEDVEKIESFMR 290
PED+ + E+F++
Sbjct: 235 TPEDLARAEAFLK 247
>gi|348686289|gb|EGZ26104.1| hypothetical protein PHYSODRAFT_258613 [Phytophthora sojae]
Length = 255
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 99/246 (40%), Positives = 154/246 (62%), Gaps = 8/246 (3%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +G+IPAR S+RF GKPL GK MI+ T+ + + L +VVA+D E++ +
Sbjct: 2 KALGVIPARLGSTRFPGKPLAEFFGKTMIEHTYAAAAGSKLLSKVVVASDSERVLNVVRG 61
Query: 109 FGADVIMTSESCRNGTERCNEALQKLE----KKYDIVVNIQGDEPLIEPEIIDGVVKALQ 164
G + + +C GT+R +AL ++ +YDIVVNIQGDEP + P ID +KAL+
Sbjct: 62 VGG-GTVLTGACNTGTDRIVQALHLMDPEELSEYDIVVNIQGDEPGVNPRHIDQCIKALR 120
Query: 165 AA-PDAVFSTAVTSLKPE-DAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP-Y 221
A PD+V ST T + E +A + VKCV D + A+YFSR +IP++KSG+ +P+ Y
Sbjct: 121 GAGPDSVMSTLATPIFDEREARSRDVVKCVADRNSNALYFSRAMIPHSKSGEFSPETTSY 180
Query: 222 LLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPED 281
L H+G+ ++ + L +P L P+ L+ EDLEQL+VL GY++++++VD GVD D
Sbjct: 181 LRHVGMYAFRKDCLLEFPSLPPSDLEESEDLEQLRVLSAGYRIQLVQVDSTLPGVDTRAD 240
Query: 282 VEKIES 287
+E +++
Sbjct: 241 LEDLKA 246
>gi|331651938|ref|ZP_08352957.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
M718]
gi|331050216|gb|EGI22274.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
M718]
Length = 248
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 106/247 (42%), Positives = 146/247 (59%), Gaps = 9/247 (3%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPAR+AS+R GKPLV+I GKPMI ER++ + D ++VATD E +A + G
Sbjct: 4 VVIIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGADRIIVATDHEDVARAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D ++VN+QGDEP+I II V L
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS----GKVNPQFPYLLHL 225
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ G +L HL
Sbjct: 123 MATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAKGLETVGDNFLRHL 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHE--AHGVDAPEDVE 283
GI Y + F++ Y P+PL+ E LEQL+VL G K+ V V HE GVD PED+E
Sbjct: 183 GIYGYRAGFIRRYVTWQPSPLEHIEMLEQLRVLWYGEKIHV-AVAHEVPGTGVDTPEDLE 241
Query: 284 KIESFMR 290
++ + MR
Sbjct: 242 RVRAEMR 248
>gi|302187289|ref|ZP_07263962.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
syringae pv. syringae 642]
Length = 254
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 98/246 (39%), Positives = 143/246 (58%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ S RF GKPL I GKPM+Q WE++ ++ + +V+ATDD +I E CQ FGA+
Sbjct: 8 VIPARYGSRRFPGKPLKTIAGKPMVQLVWEQA-CKSSAERVVIATDDARIVEACQAFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V++T + +GT+R E +L D IVVN+QGDEP+I P +ID V L A P+A
Sbjct: 67 VLLTRDDHNSGTDRLAEVAAQLGLAADAIVVNVQGDEPMIPPAVIDQVASNLAAHPEAGM 126
Query: 172 STAVTSLKPEDA-FDPNRVKCVVDNHGYAIYFSRGLIPYNKSG------KVNPQFPYLLH 224
ST + A F+PN VK D +G A+ FSR +P+ + ++ PY H
Sbjct: 127 STLAEPIDDVAALFNPNIVKVATDINGLALTFSRAPLPWARDALAANRDQLPAGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDAPEDVE 283
+GI +Y + FL + P L+ E LEQL+ L NG ++ V ++ GVD PED+E
Sbjct: 187 IGIYAYRAGFLHDFVSWGPCWLENTESLEQLRALWNGVRIHVADALEAPPGGVDTPEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|409422869|ref|ZP_11259947.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas sp.
HYS]
Length = 254
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/246 (41%), Positives = 146/246 (59%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR S+R GKPL+ I GKPMIQ WE++ ++ +V+ATDD I + C+ FGA+
Sbjct: 8 VIPARLRSTRLPGKPLLTIAGKPMIQHVWEQA-CKSSASRVVIATDDAGIFKACEAFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V+MT E +GT+R E KL D IVVN+QGDEPLI P IID V L A P+A
Sbjct: 67 VLMTREDHDSGTDRLAEVAAKLGLTADAIVVNVQGDEPLIPPVIIDQVAANLAAHPEAGI 126
Query: 172 STAVTSLKPEDA-FDPNRVKCVVDNHGYAIYFSRGLIPYNK-----SGKVNPQ-FPYLLH 224
+T + +A F+PN VK V D +G A+ FSR +P+ + S + PQ PY H
Sbjct: 127 ATLAEPISDIEALFNPNAVKVVSDCNGLALTFSRAPLPWARDAFAHSREQMPQDVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDAPEDVE 283
+G+ +Y + FL+ + P L+ E LEQL+ L +G ++ V +D GVD PED+E
Sbjct: 187 IGMYAYRAGFLQDFVAWGPCWLERTEALEQLRALWHGVRIHVADAIDAPPVGVDTPEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|326800903|ref|YP_004318722.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Sphingobacterium
sp. 21]
gi|326551667|gb|ADZ80052.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Sphingobacterium
sp. 21]
Length = 244
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 94/242 (38%), Positives = 146/242 (60%), Gaps = 4/242 (1%)
Query: 50 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQF 109
++GIIPAR+AS+RF GKPL++I GK MI+R +E++ A++L +VVATDDE+IA Q F
Sbjct: 3 IIGIIPARYASTRFPGKPLIDINGKSMIRRVYEQALKASSLKRVVVATDDERIAHHVQNF 62
Query: 110 GADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
G +VI+T+ S ++GT+RC E + K E +DI +NIQGDEP I+P ID + +
Sbjct: 63 GGNVILTASSHQSGTDRCAEVIAK-ENSFDIAINIQGDEPYIDPAQIDLLASCFEDKETQ 121
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK---SGKVNPQFPYLLHLG 226
+ + E+ F+ N K +++ AIYFSR +P+ + + K + H+G
Sbjct: 122 IATLVKEIRDHEELFNNNSPKVLLNMDREAIYFSRATLPFLRGVPTEKWLDHHKFYKHIG 181
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIE 286
I Y LK+ L + L+ E LEQL+ +ENGY++K + E +D P+D+ K++
Sbjct: 182 IYGYRCEILKLLTALPISSLEKAESLEQLRWIENGYRIKTAETLVETVAIDEPKDLHKVK 241
Query: 287 SF 288
Sbjct: 242 QL 243
>gi|148549018|ref|YP_001269120.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas putida
F1]
gi|395444683|ref|YP_006384936.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas putida
ND6]
gi|397693973|ref|YP_006531854.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas putida
DOT-T1E]
gi|421522321|ref|ZP_15968963.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas putida
LS46]
gi|148513076|gb|ABQ79936.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas
putida F1]
gi|388558680|gb|AFK67821.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas putida
ND6]
gi|397330703|gb|AFO47062.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas putida
DOT-T1E]
gi|402753940|gb|EJX14432.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas putida
LS46]
Length = 254
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 102/246 (41%), Positives = 144/246 (58%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR S+R GKPL+ I GKPM+Q WE+++ + +V+ATDD I E CQ FGA+
Sbjct: 8 VIPARLRSTRLPGKPLLLIAGKPMVQHVWEQAR-KSGASRVVIATDDTSILEACQAFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V+MT +GT+R E L D IVVN+QGDEPLI P IID V L A P+A
Sbjct: 67 VLMTRADHESGTDRLAEVAAYLGLPADAIVVNVQGDEPLIPPVIIDQVAANLAAHPEAGI 126
Query: 172 STAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPY-----NKSGKVNPQ-FPYLLH 224
+T + +PE F+PN VK V D +G A+ FSR +P+ K+ V P+ PY H
Sbjct: 127 ATLAEPIHEPETVFNPNAVKVVSDKNGLALTFSRAPLPWARDTFAKARDVLPEGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVE 283
+G+ +Y FL + P L+ E LEQL+ L +G ++ + ++ A GVD PED+E
Sbjct: 187 IGMYAYRVGFLHDFVSWGPCWLEQAEALEQLRALWHGVRIHIEDAIEAPAVGVDTPEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|387887005|ref|YP_006317304.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Francisella
noatunensis subsp. orientalis str. Toba 04]
gi|386871821|gb|AFJ43828.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Francisella
noatunensis subsp. orientalis str. Toba 04]
Length = 250
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 106/246 (43%), Positives = 144/246 (58%), Gaps = 13/246 (5%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR S+R GK L +I GKPMIQR +E+ + +++ATD E+I E + FGA
Sbjct: 7 VIPARLKSTRLPGKMLADIAGKPMIQRVYEQVA-KSKFKSIIIATDLEEIKEVAENFGAK 65
Query: 113 VIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
VI+T E +GT+R EA+ KL DIVVN+QGDEPLI E I+ + L P+AV
Sbjct: 66 VILTREDHESGTDRIAEAVTKLGFADEDIVVNVQGDEPLIPIENIEQAAQLLIEKPEAVV 125
Query: 172 STAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP---YLLHLGI 227
ST + + ED ++PN VK V D + YA+YFSR IP+ + N Q + H+GI
Sbjct: 126 STLCERITEAEDIYNPNNVKVVFDKNNYALYFSRASIPFERGFSENHQVSISEFFRHIGI 185
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAH----GVDAPEDVE 283
+Y FLK Y L +P++ E LEQL+VL NGYK I V+ A GVD +D+E
Sbjct: 186 YTYRVGFLKHYAELAISPIEKYEALEQLRVLYNGYK---IAVEQSAKPTPVGVDTLQDLE 242
Query: 284 KIESFM 289
K+
Sbjct: 243 KVRKLF 248
>gi|26988632|ref|NP_744057.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas putida
KT2440]
gi|32363184|sp|Q88LM7.1|KDSB_PSEPK RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|24983412|gb|AAN67521.1|AE016380_9 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas
putida KT2440]
Length = 254
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 102/246 (41%), Positives = 144/246 (58%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR S+R GKPL+ I GKPM+Q WE+++ + +V+ATDD I E CQ FGA+
Sbjct: 8 VIPARLRSTRLPGKPLLLIAGKPMVQHVWEQAR-KSGASRVVIATDDTSILEACQAFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V+MT +GT+R E L D IVVN+QGDEPLI P IID V L A P+A
Sbjct: 67 VMMTRADHESGTDRLAEVAAYLGLPADAIVVNVQGDEPLIPPVIIDQVAANLAAHPEAGI 126
Query: 172 STAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPY-----NKSGKVNPQ-FPYLLH 224
+T + +PE F+PN VK V D +G A+ FSR +P+ K+ V P+ PY H
Sbjct: 127 ATLAEPIHEPETVFNPNAVKVVSDKNGLALTFSRAPLPWARDTFAKARDVLPEGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVE 283
+G+ +Y FL + P L+ E LEQL+ L +G ++ + ++ A GVD PED+E
Sbjct: 187 IGMYAYRVGFLHDFVSWGPCWLEQAEALEQLRALWHGVRIHIEDAIEAPAVGVDTPEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|387128792|ref|YP_006297397.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Methylophaga sp.
JAM1]
gi|386275854|gb|AFI85752.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Methylophaga sp.
JAM1]
Length = 254
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 105/251 (41%), Positives = 148/251 (58%), Gaps = 14/251 (5%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPARFASSR GKPL I GKPMIQ +ER+ LA+ +++ATDD++IAE + FGAD
Sbjct: 6 IIPARFASSRLPGKPLRQIAGKPMIQHVYERA-LASDASEVIIATDDQRIAEVAKSFGAD 64
Query: 113 VIMTSESCRNGTERCNEALQ-KLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V +T +GT+R E Q + D+VVN+QGDEP + +I+ V L +A
Sbjct: 65 VCLTRNDHVSGTDRLAEVAQLRAFHGDDLVVNVQGDEPCLPAVLINQVAADLAHHREAAI 124
Query: 172 STAVTSLK-PEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ--------FPYL 222
+T + LK E FDPN VK +VD GYA+YFSR IP+ + N Q P+L
Sbjct: 125 TTLYSPLKDAEQVFDPNIVKVIVDAKGYAMYFSRAPIPWLREHFSNKQASDIDNITMPHL 184
Query: 223 LHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI--KVDHEAHGVDAPE 280
H+G+ +Y ++FL Y L P P + E LEQL+ L +G ++ + +VD HGVD +
Sbjct: 185 KHVGMYAYRADFLHRYHELPPAPPEQFESLEQLRALYHGNRIHLTEAQVD-PGHGVDTEQ 243
Query: 281 DVEKIESFMRE 291
D+ +E+ +
Sbjct: 244 DLLAVEALFSQ 254
>gi|422649109|ref|ZP_16712221.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
syringae pv. maculicola str. ES4326]
gi|330962635|gb|EGH62895.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
syringae pv. maculicola str. ES4326]
Length = 254
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 99/246 (40%), Positives = 144/246 (58%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ SSRF GKPL I GKPM+Q WE+++ ++ + +V+ATDD +I E CQ FGA+
Sbjct: 8 VIPARYGSSRFPGKPLKLIAGKPMVQLVWEQAR-KSSAERVVIATDDVRIVEACQAFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V++T + +GT+R E +L D IVVN+QGDEP+I P +ID V L A P+A
Sbjct: 67 VLLTRDDHNSGTDRLAEVATQLGLAADAIVVNVQGDEPMIPPAVIDQVASNLAAHPEAGI 126
Query: 172 STAVTSLKPEDA-FDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ------FPYLLH 224
ST + A F+PN VK D +G A+ FSR +P+ + + PY H
Sbjct: 127 STLAEPIDDVAALFNPNVVKVSTDINGLALTFSRAPLPWARDALARSKDELPAGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDAPEDVE 283
+GI +Y + FL + P L+ E LEQL+ L NG ++ V ++ GVD PED+E
Sbjct: 187 IGIYAYRAGFLHDFVCWGPCWLENTESLEQLRALWNGVRIHVADALEAPPGGVDTPEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|149277797|ref|ZP_01883937.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pedobacter sp.
BAL39]
gi|149231485|gb|EDM36864.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pedobacter sp.
BAL39]
Length = 243
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 98/240 (40%), Positives = 143/240 (59%), Gaps = 4/240 (1%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+V+G+IPAR+ASSRF GKPL++I GK MIQR +E++ AT +D +VVATDD++IA QQ
Sbjct: 2 KVLGVIPARYASSRFPGKPLIDIDGKVMIQRVYEQAMKATAIDQVVVATDDDRIAAAVQQ 61
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG I+T ++GT+RC E KL +D+++NIQGDEP I+PE I+ +V
Sbjct: 62 FGGSCILTGMQHQSGTDRCAEVASKL-PGFDVIINIQGDEPFIDPEQINLLVSCFDLETV 120
Query: 169 AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVN---PQFPYLLHL 225
+ + E+ F+ N K VV+ A+YFSR IP+ +S + Q Y H+
Sbjct: 121 QLATLIKEIHTEEELFNLNIPKVVVNKRMEAMYFSRQTIPFLRSSLQDAWLAQHQYYKHI 180
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKI 285
GI Y ++ L + + L+ E LEQL+ +ENGY ++ E +D PED+ KI
Sbjct: 181 GIYGYKASTLTELTKIPVSALEQAESLEQLRWIENGYTIQTKVTSIETIAIDTPEDLLKI 240
>gi|390947655|ref|YP_006411415.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Alistipes
finegoldii DSM 17242]
gi|390424224|gb|AFL78730.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Alistipes
finegoldii DSM 17242]
Length = 251
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 98/248 (39%), Positives = 143/248 (57%), Gaps = 10/248 (4%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ + IIPAR+ S+RF GKPL + G+P+IQR +E ++A LD VVATDDE+I +
Sbjct: 2 KFIAIIPARYGSTRFPGKPLAMLGGRPVIQRVYE--QVAGVLDDAVVATDDERIYDTVLA 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG MTS ++GT+RC EA K K YD+VVN+QGDEP + ++ V + P
Sbjct: 60 FGGRAEMTSPDHKSGTDRCWEAYLKQGKTYDVVVNVQGDEPFVRASQLEAVKRCFD-DPA 118
Query: 169 AVFSTAVTSLKPEDAFD----PNRVKCVVDNHGYAIYFSRGLIPYNKSGKVN---PQFPY 221
+T V D + PN K V+D A+YFSR +IPY + + + + +
Sbjct: 119 TDIATLVRPFAATDGLEALENPNSPKVVLDAQSRALYFSRSVIPYLRGVERSEWLARHTF 178
Query: 222 LLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPED 281
H+G+ ++ + L+ L + L+ E LEQL+ LENGYK+ V D E G+D PED
Sbjct: 179 YKHIGLYAFRTEVLRAVTALPQSALEKAESLEQLRWLENGYKIGVGVTDAETIGIDTPED 238
Query: 282 VEKIESFM 289
+EK E+F+
Sbjct: 239 LEKAEAFL 246
>gi|392541411|ref|ZP_10288548.1| CTP:CMP-3-deoxy-D-manno-octulosonate transferase [Pseudoalteromonas
piscicida JCM 20779]
Length = 253
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 101/248 (40%), Positives = 151/248 (60%), Gaps = 11/248 (4%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V +IPAR+ASSR GKPL +I GKPMIQR +E++ + + + +ATD + E Q F
Sbjct: 4 VVVIPARYASSRLPGKPLADIGGKPMIQRVYEQA-IQSGAAAVYIATDHSAVFEAAQHFT 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V+MT E ++GTER E +++LE + +VVN+QGDEPL+EP+ I V AL DA
Sbjct: 63 DNVLMTREDHQSGTERLAEVVEQLELNEQTLVVNVQGDEPLLEPDNI-AQVAALLHHSDA 121
Query: 170 VFSTAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVN------PQFPYL 222
+T ++ E+ +PN VK V D A+YFSR IP+ + + P +
Sbjct: 122 PMATLCVDVEDVEEVLNPNAVKVVSDIQDNALYFSRSSIPFQRDSMLTLDKNSIPVSHFK 181
Query: 223 LHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAH-GVDAPED 281
H+GI +Y + F++ Y L +PL+++E LEQL+VL +GYK+KV K H GVD PED
Sbjct: 182 RHVGIYAYRAGFIQTYLSLSVSPLEVQESLEQLRVLYHGYKIKVAKAAKPVHAGVDTPED 241
Query: 282 VEKIESFM 289
+ +++ +
Sbjct: 242 LARVQEIL 249
>gi|377576305|ref|ZP_09805289.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia
hermannii NBRC 105704]
gi|377542337|dbj|GAB50454.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia
hermannii NBRC 105704]
Length = 248
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 104/247 (42%), Positives = 147/247 (59%), Gaps = 9/247 (3%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPARFAS+R GKPLV+I GKPMI ER+ L + D ++VATD +++A+ + G
Sbjct: 4 VTIIPARFASTRLPGKPLVDINGKPMIVHVLERA-LESGADRVIVATDAQEVADAVRAVG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT +GTER E ++K+ D I+VN+QGDEP+I P II V + L
Sbjct: 63 GEVCMTRADHESGTERLAEVVEKMAFPDDTIIVNVQGDEPMIPPAIIRQVAENLAQRDVG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP----YLLHL 225
+ + AV E+AF+PN VK V D GYA+YFSR IP+++ +L H+
Sbjct: 123 MATLAVPVHSAEEAFNPNAVKVVTDKEGYALYFSRAAIPWDRDRFAQSHDDIADYFLRHI 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHE--AHGVDAPEDVE 283
GI Y + F++ Y P+ L+ E LEQL+VL +G K+ V V HE GVD P D+E
Sbjct: 183 GIYGYRAGFIRRYVTWAPSELEHIEKLEQLRVLWHGEKIHV-AVAHEVPGTGVDTPADLE 241
Query: 284 KIESFMR 290
++ + +R
Sbjct: 242 RVRAELR 248
>gi|422653205|ref|ZP_16715976.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
syringae pv. actinidiae str. M302091]
gi|330966259|gb|EGH66519.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
syringae pv. actinidiae str. M302091]
Length = 254
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 97/246 (39%), Positives = 144/246 (58%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ SSRF GKPL I GKPM+Q WE+++ ++ + +V+ATDD +I E C+ FGA+
Sbjct: 8 VIPARYGSSRFPGKPLKTIAGKPMVQLVWEQAR-KSSAERVVIATDDARIVEACRAFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V++T E +GT+R E +L D IVVN+QGDEP+I P +ID V L P+A
Sbjct: 67 VLLTREDHNSGTDRLAEVATQLGLAADAIVVNVQGDEPMIPPAVIDQVAANLAKHPEAGM 126
Query: 172 STAVTSLKPEDA-FDPNRVKCVVDNHGYAIYFSRGLIPYNKSG------KVNPQFPYLLH 224
+T + A F+PN VK D +G A+ FSR +P+ + ++ PY H
Sbjct: 127 ATLAEPIDDVAALFNPNIVKVSTDINGLALTFSRAPLPWARDALARSKDELPADVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDAPEDVE 283
+GI +Y + FL + P L+ E LEQL+ L NG ++ V ++ GVD PED+E
Sbjct: 187 IGIYAYRAGFLHDFVSWGPCWLENTESLEQLRALWNGVRIHVADALEAPPGGVDTPEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|89092887|ref|ZP_01165839.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Neptuniibacter
caesariensis]
gi|89082912|gb|EAR62132.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Oceanospirillum
sp. MED92]
Length = 255
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 104/253 (41%), Positives = 146/253 (57%), Gaps = 16/253 (6%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPARFAS+RF GKPL + GKPMIQ +ER+ + + ++VATDD++IA + FGA+
Sbjct: 6 IIPARFASTRFPGKPLAELQGKPMIQHVYERA-CESEAERIMVATDDDRIAAVAKGFGAE 64
Query: 113 VIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS +GT+R + + L DIVVN+QGDEPL+ II+ V L A DA
Sbjct: 65 VCMTSPDHPSGTDRLQQVVSDLGFYADDIVVNVQGDEPLVPARIINQVAHNLMAETDASI 124
Query: 172 ST---AVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPY--------NKSGKVNPQFP 220
ST +T L E +PN VK V D G A+YFSR IPY +SG + +
Sbjct: 125 STLSEPITDL--ESLLNPNVVKVVTDTRGMALYFSRAPIPYPRNDFAESTQSGAMPEGYS 182
Query: 221 YLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHE-AHGVDAP 279
+ H+GI +Y L + P P++ E LEQL+ + NG ++ V + D + GVD P
Sbjct: 183 WQRHIGIYAYRVKLLNDFVKWSPAPIEETECLEQLRAMWNGARIHVAEADEQPPAGVDTP 242
Query: 280 EDVEKIESFMRER 292
ED+E+++ + R
Sbjct: 243 EDLERLQKLLASR 255
>gi|82777559|ref|YP_403908.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Shigella
dysenteriae Sd197]
gi|309787789|ref|ZP_07682399.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shigella
dysenteriae 1617]
gi|123562147|sp|Q32E38.1|KDSB_SHIDS RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|81241707|gb|ABB62417.1| CTP:CMP-3-deoxy-D-manno-octulosonate transferase [Shigella
dysenteriae Sd197]
gi|308924188|gb|EFP69685.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shigella
dysenteriae 1617]
Length = 248
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 106/247 (42%), Positives = 145/247 (58%), Gaps = 9/247 (3%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPAR+AS+R GKPLV+I GKPMI ER++ + D ++VATD E +A + G
Sbjct: 4 VVIIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGADRIIVATDHEDVARAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D ++VN+QGDEP+I II V L
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS----GKVNPQFPYLLHL 225
+ + AV E+AF+PN VK V+D GYA+YFSR IP+ + G +L HL
Sbjct: 123 MATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATIPWERDRFAKGLETVGDNFLRHL 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHE--AHGVDAPEDVE 283
GI Y + F++ Y P+PL+ E LEQL+VL G K+ V V HE GVD PED+E
Sbjct: 183 GIYGYRAGFIRRYVTWQPSPLEHIEMLEQLRVLWYGEKIHV-AVAHEVPGTGVDTPEDLE 241
Query: 284 KIESFMR 290
++ + MR
Sbjct: 242 RVRAEMR 248
>gi|422299573|ref|ZP_16387135.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas
avellanae BPIC 631]
gi|407988483|gb|EKG31010.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas
avellanae BPIC 631]
Length = 254
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 97/246 (39%), Positives = 144/246 (58%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ SSRF GKPL I GKPM+Q WE+++ ++ + +V+ATDD +I E C+ FGA+
Sbjct: 8 VIPARYGSSRFPGKPLKTIAGKPMVQLVWEQAR-KSSAERVVIATDDARIVEACRAFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V++T E +GT+R E +L D IVVN+QGDEP+I P +ID V L P+A
Sbjct: 67 VLLTREDHNSGTDRLAEVATQLGLAADAIVVNVQGDEPMIPPAVIDQVAANLAEHPEAGM 126
Query: 172 STAVTSLKPEDA-FDPNRVKCVVDNHGYAIYFSRGLIPYNKSG------KVNPQFPYLLH 224
+T + A F+PN VK D +G A+ FSR +P+ + ++ PY H
Sbjct: 127 ATLAEPIDDVAALFNPNIVKVSTDINGLALTFSRAPLPWARDALARSKDELPADVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDAPEDVE 283
+GI +Y + FL + P L+ E LEQL+ L NG ++ V ++ GVD PED+E
Sbjct: 187 IGIYAYRAGFLHDFVSWGPCWLENTESLEQLRALWNGVRIHVADALEAPPGGVDTPEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|319793944|ref|YP_004155584.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Variovorax
paradoxus EPS]
gi|315596407|gb|ADU37473.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Variovorax
paradoxus EPS]
Length = 261
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 99/252 (39%), Positives = 143/252 (56%), Gaps = 13/252 (5%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
R ++PAR AS+R KPL +I G PM+ R +R+ + +VVA DD I C+
Sbjct: 6 RFTVLVPARLASTRLPNKPLADIAGLPMVVRVAQRAS-QSGASRVVVAGDDASIVSACKA 64
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAP 167
G + I+T + +GT+R EA ++L D IVVN+QGDEPLI+PE+ID V AL P
Sbjct: 65 HGVEAILTRQDHPSGTDRLAEACEQLGLDGDEIVVNVQGDEPLIDPELIDAVAAALALHP 124
Query: 168 DAVFSTAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLL--- 223
+A STA + D +PN VK V+D G A+YFSR IP+ + G P L
Sbjct: 125 EAAMSTAAHEIDSISDFMNPNVVKAVLDAQGNALYFSRAPIPWWRDGSAGGAAPTALPLP 184
Query: 224 ----HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEA--HGVD 277
H+GI Y + F++ +P L P P++ E LEQL+ L +G+++ V V H A G+D
Sbjct: 185 APLRHIGIYGYRAGFVRKFPSLPPAPVEATEALEQLRALWHGHRIAV-HVSHVAPGPGID 243
Query: 278 APEDVEKIESFM 289
PED+ ++ +
Sbjct: 244 TPEDLARVRAVF 255
>gi|52208929|emb|CAH34868.1| putative 3-deoxy-manno-octulosonate cytidylyltransferase
[Burkholderia pseudomallei K96243]
Length = 278
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 96/276 (34%), Positives = 154/276 (55%), Gaps = 21/276 (7%)
Query: 37 RAYLGRSKNFRSR-------VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATT 89
RA+ S R+R V ++PAR AS+R KPL ++ GKPM+ R ER++ A
Sbjct: 2 RAHFSNSFALRARPMTSPLPFVAVVPARLASTRLPNKPLADLGGKPMVVRVAERAREAGA 61
Query: 90 LDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDE 148
++VA+D +++ + ++ G D ++T +GT+R E KL D IVVN+QGDE
Sbjct: 62 -QQVLVASDAQRVLDAVREHGFDAVLTRADHPSGTDRLAEVAAKLGFDDDTIVVNVQGDE 120
Query: 149 PLIEPEIIDGVVKALQAAPDAVFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLI 207
PLI+P+++ V L A P +TA + + + F+PN VK V+D HG A+YFSR I
Sbjct: 121 PLIDPQLVRDVASHLAAHPSCAIATAAHPIHEAHEVFNPNYVKVVLDAHGVALYFSRAPI 180
Query: 208 PYNKSGKV----------NPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKV 257
P+++ + P P H+G+ +Y + FL+ YP L P++ E LEQL+
Sbjct: 181 PWSRDAYLPHWPNVAAMPAPTCPVYRHIGLYAYRARFLRTYPTLAQAPIEAAEQLEQLRA 240
Query: 258 LENGYKMKVIKVDHEAH-GVDAPEDVEKIESFMRER 292
+ +G ++ V +H G+D P D+E++++ R R
Sbjct: 241 MWHGERIAVRVTEHAPEAGIDTPADLERVQALFRSR 276
>gi|84394636|ref|ZP_00993330.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio splendidus
12B01]
gi|84374739|gb|EAP91692.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio splendidus
12B01]
Length = 248
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 102/245 (41%), Positives = 147/245 (60%), Gaps = 11/245 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ SSR GKPL +I GKPMIQ +E+S A D++++ATDD ++ + + FGA
Sbjct: 6 VIPARYQSSRLPGKPLADIGGKPMIQWVYEQSMKAGA-DNVIIATDDARVEKAAKAFGAT 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKAL--QAAPDA 169
V MTS + +GTER E ++ ++ D I+VN+QGDEPLI P II+ V L AP A
Sbjct: 65 VCMTSPNHESGTERLAEVIEVMKIPDDHIIVNVQGDEPLIPPAIINQVANNLANSTAPMA 124
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVN----PQFPYLLHL 225
+T ++ F+PN VK V D GYA+YFSR IP+++ N + P L H+
Sbjct: 125 TLGVEIT--HADEVFNPNAVKVVTDKDGYALYFSRATIPWDRDAYANNGTAAESPLLRHI 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMK-VIKVDHEAHGVDAPEDVEK 284
GI +Y + F+ Y P+ L+ E LEQL+VL G K+ + + A GVD PED+E
Sbjct: 183 GIYAYRAGFINTYINWEPSTLERIECLEQLRVLWYGEKIHVAVAEEAPAAGVDTPEDLEA 242
Query: 285 IESFM 289
+ + +
Sbjct: 243 VRAII 247
>gi|336323236|ref|YP_004603203.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Flexistipes
sinusarabici DSM 4947]
gi|336106817|gb|AEI14635.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Flexistipes
sinusarabici DSM 4947]
Length = 242
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 97/244 (39%), Positives = 151/244 (61%), Gaps = 8/244 (3%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQF-GA 111
IIPAR+ SSR GKPLV I G PMI R L + D ++VATDD KI E C++ G
Sbjct: 5 IIPARYNSSRLPGKPLVKIGGIPMIARVANNC-LKSVADRVIVATDDIKIMEICEKIDGL 63
Query: 112 DVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
+V ++ + +GT+R ++ + L + DI+VN+QGDEP + ++I+ ++ +L+ +
Sbjct: 64 EVTLSDKEYFSGTDRISDVAKYLRE--DIIVNVQGDEPFLSYKLINDLINSLKDNDNIYM 121
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYD 231
S+A ++ +A DP VK VD GYA+YFSR IP+ ++ V Y H+GI +
Sbjct: 122 SSAYVNMNETEADDPGNVKVAVDREGYALYFSRAKIPFGRNKNV---AQYKKHIGIYGFK 178
Query: 232 SNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFMRE 291
+FL Y + TPL+ E+LEQL+ LENGY++K+I+ D+++ +D +DV+K E + E
Sbjct: 179 RHFLLKYAEMDRTPLEKTEELEQLRALENGYRIKMIESDNDSLSIDTYDDVKKAEKIL-E 237
Query: 292 RNLS 295
R +S
Sbjct: 238 RGVS 241
>gi|76579230|gb|ABA48705.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Burkholderia
pseudomallei 1710b]
Length = 314
Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 96/276 (34%), Positives = 154/276 (55%), Gaps = 21/276 (7%)
Query: 37 RAYLGRSKNFRSR-------VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATT 89
RA+ S R+R V ++PAR AS+R KPL ++ GKPM+ R ER++ A
Sbjct: 38 RAHFSNSFALRARPMTSPLPFVAVVPARLASTRLPNKPLADLGGKPMVVRVAERAREAGA 97
Query: 90 LDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDE 148
++VA+D +++ + ++ G D ++T +GT+R E KL D IVVN+QGDE
Sbjct: 98 -QQVLVASDAQRVLDAVREHGFDAVLTRADHPSGTDRLAEVAAKLGFDDDTIVVNVQGDE 156
Query: 149 PLIEPEIIDGVVKALQAAPDAVFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLI 207
PLI+P+++ V L A P +TA + + + F+PN VK V+D HG A+YFSR I
Sbjct: 157 PLIDPQLVRDVASHLAAHPSCAIATAAHPIHEAHEVFNPNYVKVVLDAHGVALYFSRAPI 216
Query: 208 PYNKSGKV----------NPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKV 257
P+++ + P P H+G+ +Y + FL+ YP L P++ E LEQL+
Sbjct: 217 PWSRDAYLPHWPNVAAMPAPTCPVYRHIGLYAYRARFLRTYPTLAQAPIEAAEQLEQLRA 276
Query: 258 LENGYKMKVIKVDHEAH-GVDAPEDVEKIESFMRER 292
+ +G ++ V +H G+D P D+E++++ R R
Sbjct: 277 MWHGERIAVRVTEHAPEAGIDTPADLERVQALFRSR 312
>gi|386013239|ref|YP_005931516.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas putida
BIRD-1]
gi|313499945|gb|ADR61311.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas putida
BIRD-1]
Length = 254
Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 102/246 (41%), Positives = 143/246 (58%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR S+R GKPL+ I GKPM+Q WE+++ + +V+ATDD I E CQ FGA+
Sbjct: 8 VIPARLRSTRLPGKPLLLIAGKPMVQHVWEQAR-KSGASRVVIATDDTSILEACQAFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V+MT +GT+R E L D IVVN+QGDEPLI P IID V L A P+A
Sbjct: 67 VLMTRADHESGTDRLAEVAAYLGLPADAIVVNVQGDEPLIPPVIIDQVAANLAAHPEAGI 126
Query: 172 STAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPY-----NKSGKVNP-QFPYLLH 224
+T + +PE F+PN VK V D +G A+ FSR +P+ K+ V P PY H
Sbjct: 127 ATLAEPIHEPETVFNPNAVKVVSDKNGLALTFSRAPLPWARDTFAKARNVLPVGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVE 283
+G+ +Y FL + P L+ E LEQL+ L +G ++ + ++ A GVD PED+E
Sbjct: 187 IGMYAYRVGFLHDFVSWGPCWLEQAEALEQLRALWHGVRIHIEDAIEAPAVGVDTPEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|398973227|ref|ZP_10684229.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas sp.
GM25]
gi|398143201|gb|EJM32080.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas sp.
GM25]
Length = 254
Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 102/246 (41%), Positives = 148/246 (60%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IP+R+AS+R GKPL++I GKPMIQ WE++ ++ +VVATDD +I E C+ FGA+
Sbjct: 8 VIPSRYASTRLPGKPLLDIAGKPMIQHVWEQAS-KSSASRVVVATDDARIVEACKAFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V++T E +GT+R E KL + D IVVN+QGDEPLI P +ID V L A +A
Sbjct: 67 VVLTREDHNSGTDRLAEVAAKLGLEPDAIVVNVQGDEPLIPPSVIDQVAANLAAHTEARM 126
Query: 172 STAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPY-----NKSGKVNPQ-FPYLLH 224
+T ++ E F+PN VK V D +G A+ FSR +P+ KS V P+ PY H
Sbjct: 127 ATLAEPIEDVETLFNPNVVKVVSDLNGLALTFSRATLPWARDAFAKSRDVLPEGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDAPEDVE 283
+GI +Y + FL+ + P L+ E LEQL+ L +G ++ V + GVD ED+E
Sbjct: 187 IGIYAYRAGFLQDFVSWGPCWLENTESLEQLRALWHGVRIHVADALIAPPTGVDTAEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRCLL 252
>gi|221134266|ref|ZP_03560571.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Glaciecola sp.
HTCC2999]
Length = 258
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 106/249 (42%), Positives = 145/249 (58%), Gaps = 17/249 (6%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPARF S+RF GKPL +I GKPMIQ ERS +A D + VATDD +I FGA+
Sbjct: 6 IIPARFGSTRFPGKPLADIHGKPMIQHVVERS-MAAQADAVYVATDDVRIESVVNDFGAN 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
VIMTS ++GTER E + L + I+VN+QGDEP I +II V + L P+AV
Sbjct: 65 VIMTSPDHQSGTERLAEVVDILNASDETIIVNVQGDEPHIPVDIIRQVAQNLAQHPEAVM 124
Query: 172 STAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK-----SGKVNP-------- 217
+T ++ P + +PN VK V+D HG A+YFSR +PY + + P
Sbjct: 125 ATLACAITTPAELMNPNAVKVVMDKHGMAMYFSRAPLPYVRDEFMAGTETKPVSDIHSPL 184
Query: 218 QFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIK-VDHEAHGV 276
+ H+GI +Y + F+K Y L P+ L+ E LEQL+VL +GYK+ V + + G+
Sbjct: 185 THSHYRHIGIYAYRAGFIKEYMTLTPSDLEQIESLEQLRVLYHGYKIHVAEALSTPPPGI 244
Query: 277 DAPEDVEKI 285
D PED+ I
Sbjct: 245 DTPEDLANI 253
>gi|422833120|ref|ZP_16881187.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
E101]
gi|371607870|gb|EHN96433.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
E101]
Length = 248
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 105/247 (42%), Positives = 146/247 (59%), Gaps = 9/247 (3%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPAR+AS+R GKPLV+I GKPMI ER++ + + ++VATD E +A + G
Sbjct: 4 VVIIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGAERIIVATDHEDVARAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D ++VN+QGDEP+I II V L
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS----GKVNPQFPYLLHL 225
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ G +L HL
Sbjct: 123 MATLAVPIYNAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAKGLETVGDNFLRHL 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHE--AHGVDAPEDVE 283
GI Y + F++ Y P+PL+ E LEQL+VL G K+ V V HE GVD PED+E
Sbjct: 183 GIYGYRAGFIRRYVTWQPSPLEHIEMLEQLRVLWYGEKIHV-AVAHEVPGTGVDTPEDLE 241
Query: 284 KIESFMR 290
++ + MR
Sbjct: 242 RVRAEMR 248
>gi|330811009|ref|YP_004355471.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|423698569|ref|ZP_17673059.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas
fluorescens Q8r1-96]
gi|327379117|gb|AEA70467.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|388004868|gb|EIK66135.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas
fluorescens Q8r1-96]
Length = 254
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 101/246 (41%), Positives = 147/246 (59%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IP+RFAS+R GKPL++I GKPMIQ WE++ ++ +VVATDD +I E C+ FGA+
Sbjct: 8 VIPSRFASTRLPGKPLLSIAGKPMIQHVWEQA-CKSSAQRVVVATDDARIVEACKGFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V++T E +GT+R E KL D IVVN+QGDEPLI P +ID V L A +A
Sbjct: 67 VVLTREDHNSGTDRLAEVAAKLGLAADAIVVNVQGDEPLIPPSVIDQVAANLAAHTEARM 126
Query: 172 STAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK-----SGKVNPQ-FPYLLH 224
+T ++ + F+PN VK V D +G A+ FSR +P+ + S V P+ PY H
Sbjct: 127 ATLAEPIEDVQTLFNPNVVKVVSDLNGLALTFSRATLPWARDAFAQSRDVMPEGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDAPEDVE 283
+GI +Y + FL+ + P L+ E LEQL+ L +G ++ V + GVD ED+E
Sbjct: 187 IGIYAYRAGFLQDFVAWGPCWLENTESLEQLRALWHGVRIHVADALIAPPTGVDTAEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|343502189|ref|ZP_08740048.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio tubiashii
ATCC 19109]
gi|418478972|ref|ZP_13048065.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio tubiashii
NCIMB 1337 = ATCC 19106]
gi|342815314|gb|EGU50236.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio tubiashii
ATCC 19109]
gi|384573522|gb|EIF04016.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio tubiashii
NCIMB 1337 = ATCC 19106]
Length = 250
Score = 177 bits (449), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 100/247 (40%), Positives = 148/247 (59%), Gaps = 9/247 (3%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ S+R GKPL +I GKPMIQ +E++ + D ++VATDD ++ + + FG
Sbjct: 6 VIPARYQSTRLPGKPLADICGKPMIQWVYEQA-IQAGADKVIVATDDSRVEQAIEAFGGQ 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS + +GTER E ++K+ D I+VN+QGDEPLI P II V + L + +
Sbjct: 65 VCMTSPNHESGTERLAEVVEKMAIPDDHIIVNVQGDEPLIPPSIITQVAENLANSQAPMS 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK-----SGKVNPQFPYLLHLG 226
+ AV + F+PN VK + D GYA+YFSR IP+++ K+ Q P + H+G
Sbjct: 125 TLAVEISDEAEVFNPNAVKVLTDKDGYAMYFSRATIPWDRDSFADDAKIIKQ-PLMRHIG 183
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKI 285
I +Y + F+ Y PT L+ E LEQL+VL G K+ V + + A GVD PED+E +
Sbjct: 184 IYAYRAGFINTYINWEPTALEKIECLEQLRVLWYGEKIHVEVAKEAPAAGVDTPEDLEVV 243
Query: 286 ESFMRER 292
S + ++
Sbjct: 244 RSIIAKQ 250
>gi|260772495|ref|ZP_05881411.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio
metschnikovii CIP 69.14]
gi|260611634|gb|EEX36837.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio
metschnikovii CIP 69.14]
Length = 248
Score = 177 bits (449), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 98/243 (40%), Positives = 147/243 (60%), Gaps = 7/243 (2%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR+ S+R GKPL +I GKPMIQ +E+++ A + ++VATDD ++ + FG
Sbjct: 6 IIPARYQSTRLPGKPLADIGGKPMIQWVYEQAQQAGA-ERVIVATDDSRVEQAVLSFGGS 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS ++GTER E + + D I+VN+QGDEPLI P II V + L ++ +
Sbjct: 65 VCMTSTEHQSGTERLAEVIALMGIDDDHIIVNVQGDEPLIPPVIIRQVAENLASSQAPMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKV-NPQF---PYLLHLGI 227
+ AV P++ F+PN VK V D HGYA+YFSR IP+++ + P+ P + H+GI
Sbjct: 125 TLAVEIDDPQEVFNPNAVKVVTDQHGYALYFSRATIPWDRDNFILEPKAITQPLMRHIGI 184
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKIE 286
+Y + F+ Y P+ L+ E+LEQL+VL G K+ V + ++ GVD PED+ +
Sbjct: 185 YAYRAGFINTYIHWSPSVLEKIENLEQLRVLWYGEKIHVAVALEAPPAGVDTPEDLAAVR 244
Query: 287 SFM 289
+
Sbjct: 245 KLI 247
>gi|431801440|ref|YP_007228343.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas putida
HB3267]
gi|430792205|gb|AGA72400.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas putida
HB3267]
Length = 254
Score = 177 bits (449), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 99/246 (40%), Positives = 145/246 (58%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR S+R GKPL++I GKPM+Q WE+++ + +V+ATDD I E C+ FGA+
Sbjct: 8 VIPARLRSTRLPGKPLLSIAGKPMVQHVWEQAR-KSGASRVVIATDDASIVEACKAFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V++T +GT+R E L D IVVN+QGDEPLI P IID V L A P+A
Sbjct: 67 VLLTRADHESGTDRLAEVAVHLGLSADAIVVNVQGDEPLIPPVIIDQVAANLAAHPEAGI 126
Query: 172 STAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSG-----KVNPQ-FPYLLH 224
+T + +PE F+PN VK V D +G A+ FSR +P+ + + P+ PY H
Sbjct: 127 ATLAEPIHEPETVFNPNAVKVVSDKNGLALTFSRAPLPWARDAFAKDRNLLPEGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVE 283
+G+ +Y FL+ + P L+ E LEQL+ L +G ++ V ++ A GVD PED+E
Sbjct: 187 IGMYAYRVGFLQDFVSWGPCWLEQTEALEQLRALWHGVRIHVEDAIEAPAVGVDTPEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|260655086|ref|ZP_05860574.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Jonquetella
anthropi E3_33 E1]
gi|424844931|ref|ZP_18269542.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Jonquetella
anthropi DSM 22815]
gi|260630197|gb|EEX48391.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Jonquetella
anthropi E3_33 E1]
gi|363986369|gb|EHM13199.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Jonquetella
anthropi DSM 22815]
Length = 241
Score = 177 bits (449), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 101/249 (40%), Positives = 151/249 (60%), Gaps = 15/249 (6%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+++ +IPAR+ S+R GKPL+++ GKP+IQ +ER A++L +VVATDDE+I + +
Sbjct: 3 KLLCVIPARWGSTRLPGKPLLDLNGKPVIQHVYERCLQASSLSRVVVATDDERIVKAVKS 62
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG + ++TS NGT R EA + + V+N+QGDEP IEP +ID + + + + D
Sbjct: 63 FGGEAVITSPDHPNGTCRVAEAARGTDCAA--VLNVQGDEPTIEPRLIDLLAETIITS-D 119
Query: 169 AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYN--KSGKVNPQFPYLLHLG 226
A +T ++ + DPN VK V+D A+YFSR IPY K+G + L HLG
Sbjct: 120 APMATLAVPIRDGELEDPNVVKVVLDRRSCALYFSRSPIPYQRVKAGVL------LHHLG 173
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAH---GVDAPEDVE 283
+ +Y ++FL +Y L PTPL E LEQL+ LE+GY++ V VD A G+D ED+E
Sbjct: 174 LYAYKTDFLPVYAALEPTPLSEAESLEQLRALEHGYQIAV-AVDTLAGPTIGIDVLEDLE 232
Query: 284 KIESFMRER 292
+ + R
Sbjct: 233 RARQLLNSR 241
>gi|63192009|gb|AAY34906.1| CMP-KDO synthetase, partial [Prunus armeniaca]
Length = 90
Score = 177 bits (449), Expect = 5e-42, Method: Composition-based stats.
Identities = 82/90 (91%), Positives = 88/90 (97%)
Query: 71 ILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEA 130
ILGKPMIQRTWER+KLATTLDH+VVATDDEKI ECC+ FGADVIMTSESCRNGTERC+EA
Sbjct: 1 ILGKPMIQRTWERAKLATTLDHVVVATDDEKIRECCRSFGADVIMTSESCRNGTERCSEA 60
Query: 131 LQKLEKKYDIVVNIQGDEPLIEPEIIDGVV 160
+QKLEKKYDIVVNIQGDEPLIEPEIIDG+V
Sbjct: 61 IQKLEKKYDIVVNIQGDEPLIEPEIIDGIV 90
>gi|269120967|ref|YP_003309144.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Sebaldella
termitidis ATCC 33386]
gi|268614845|gb|ACZ09213.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Sebaldella
termitidis ATCC 33386]
Length = 247
Score = 177 bits (449), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 100/253 (39%), Positives = 148/253 (58%), Gaps = 14/253 (5%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+++G+IPAR+ASSRF GKPL I GKPMI+ ++RS + + LD +VVATDD++I +
Sbjct: 2 KILGVIPARYASSRFNGKPLELICGKPMIEWVYKRS-IKSELDDVVVATDDKRIFDTVAD 60
Query: 109 FGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
FG +MT + NGT R E + E K ++ ++NIQGDEP+I+PE I+ +V +
Sbjct: 61 FGGKAVMTRDDHVNGTSRIQEVIGFDEYKDFEFIINIQGDEPIIDPESINILVNKYKTE- 119
Query: 168 DAVFSTAVTSLKPE-----DAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYL 222
+ +LK E D +PN VK + D A+YFSR LIPY ++ + F Y
Sbjct: 120 ----KAEIITLKEEIKCSLDKENPNVVKVITDFSDNALYFSRSLIPYMRNA--DDDFIYY 173
Query: 223 LHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDV 282
H+GI Y S L + L+ E LEQL+ LEN YK+KV + GVD ED+
Sbjct: 174 RHVGIYGYTSKVLNNMDNMKDGVLEHIESLEQLRFLENDYKIKVYETKSTVKGVDTKEDL 233
Query: 283 EKIESFMRERNLS 295
++E +++ N++
Sbjct: 234 LEVEEIIKKNNIT 246
>gi|421749305|ref|ZP_16186763.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Cupriavidus
necator HPC(L)]
gi|409771849|gb|EKN54029.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Cupriavidus
necator HPC(L)]
Length = 269
Score = 177 bits (449), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 99/255 (38%), Positives = 139/255 (54%), Gaps = 17/255 (6%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR AS+R KPL +I GKPMI R ER+ A++ +VVATD + + C + G +
Sbjct: 9 VIPARLASTRLPNKPLADIAGKPMIVRVAERAH-ASSARRIVVATDADTVRAACAEHGIE 67
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
++T GT+R E L D IVVN+QGDEPLI P +ID V L A PD
Sbjct: 68 AVLTRADHATGTDRLAEVATLLSLDDDAIVVNVQGDEPLIAPALIDAVAGHLAAHPDCAI 127
Query: 172 STAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVN-------------P 217
+TA L + F+PN VK V D+ G A+YFSR IP+ + P
Sbjct: 128 ATAAHPLHEIGEVFNPNVVKVVCDSAGRALYFSRAPIPWARDAWSGVPSAPAANAQVPLP 187
Query: 218 QFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHE-AHGV 276
P L H+G+ +Y + FL+ +P L PL+ E LEQL+ + +G ++ V+ D A GV
Sbjct: 188 DMPVLRHIGLYAYRAGFLRRFPALPVAPLEQTEALEQLRAMWHGERIAVLATDAAPAPGV 247
Query: 277 DAPEDVEKIESFMRE 291
D P D+E++ + E
Sbjct: 248 DTPADLERVRALWSE 262
>gi|114568914|ref|YP_755594.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Maricaulis maris
MCS10]
gi|122316829|sp|Q0AST1.1|KDSB_MARMM RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|114339376|gb|ABI64656.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Maricaulis maris
MCS10]
Length = 259
Score = 177 bits (449), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 99/252 (39%), Positives = 143/252 (56%), Gaps = 14/252 (5%)
Query: 50 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQF 109
V+ +IPAR+ S+RF GKPL I G+ MI+R W + +D +VVATDD++I +
Sbjct: 3 VLAVIPARYGSTRFPGKPLAMIAGQMMIERVWRIAAAVPGVDRVVVATDDQRIMDAVAAA 62
Query: 110 GADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
G + +MT CRNGTER +A+++L DIV+N+QGD PLI P +I GV + L+A P
Sbjct: 63 GGEAVMTDPDCRNGTERALDAVKRLNSDADIVINVQGDAPLIPPWVIGGVAETLRADPSL 122
Query: 170 VFSTAVTSLKPE--------DAFDPNRVKCVVDNHGY-AIYFSRGLIPYNKSGKVNPQFP 220
+T +L PE A VV N A+YFS+ +IP+ + K + P
Sbjct: 123 QMATPAIALPPETEARMRADKANGSASGTTVVFNKAMDAMYFSKNVIPFRR--KPDEGAP 180
Query: 221 YLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHE---AHGVD 277
H+G+ Y + L+ L PTP +L E LEQL+ LENG ++V+ D+ A VD
Sbjct: 181 TYQHIGLYGYRRDTLEGLVALEPTPFELTESLEQLRALENGIPIRVVLTDYRGRSAWSVD 240
Query: 278 APEDVEKIESFM 289
APED ++E +
Sbjct: 241 APEDAVRVEGII 252
>gi|327314547|ref|YP_004329984.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Prevotella
denticola F0289]
gi|326944644|gb|AEA20529.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Prevotella
denticola F0289]
Length = 305
Score = 177 bits (449), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 95/240 (39%), Positives = 146/240 (60%), Gaps = 7/240 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
+GIIPAR+ SSRF GKPL + GK +I+ + ++++ L + VATDD +I FG
Sbjct: 63 IGIIPARYGSSRFPGKPLAMLGGKTVIEHVYR--QVSSVLTDVYVATDDPRIHNAVAAFG 120
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAV 170
+MT ++GT+R EAL K+ +D+V+NIQGDEP I+ I+ V++ + +
Sbjct: 121 GKSVMTRPDHKSGTDRICEALDKIGGSFDVVINIQGDEPFIQKSQIETVMQCFDDSRTQI 180
Query: 171 FSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ----FPYLLHLG 226
+ E A +PN K V+DN+GYA+YFSR +IP+ + GK + +P+L H+G
Sbjct: 181 ATLGKPFETIEAAQNPNSPKIVLDNNGYALYFSRSVIPFVR-GKATSEWLSTYPFLKHIG 239
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIE 286
+ +Y + L+ L + L+L E LEQL+ L+NGYK+KV D E G+D PED+++ E
Sbjct: 240 LYAYRTEVLREVSRLPQSSLELAESLEQLRWLQNGYKIKVGLTDVETIGIDTPEDLQRAE 299
>gi|146306647|ref|YP_001187112.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
mendocina ymp]
gi|229830642|sp|A4XSR4.1|KDSB_PSEMY RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|145574848|gb|ABP84380.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas
mendocina ymp]
Length = 254
Score = 177 bits (449), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 103/246 (41%), Positives = 144/246 (58%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+AS+R GKPL +I GKPM+Q WE++K ++ +VVATDD +I E C+ FGA+
Sbjct: 8 VIPARYASTRLPGKPLQDIAGKPMVQHVWEQAK-KSSASRVVVATDDARIVEACKVFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V++T E +GT+R E +L D IVVN+QGDEPL+ P IID V L P A
Sbjct: 67 VLLTREDHNSGTDRLAEVATQLGLPADAIVVNVQGDEPLVPPSIIDQVAANLATNPQAGI 126
Query: 172 STAVTSLKPEDA-FDPNRVKCVVDNHGYAIYFSRGLI-----PYNKSGKVNPQ-FPYLLH 224
+T ++ A F+PN VK V D G A+ FSR + + KS V P PY H
Sbjct: 127 ATLAEPIEDVTALFNPNVVKVVADKSGLALTFSRAPLAWARDAFAKSRDVLPAGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDAPEDVE 283
+GI +Y + FL + P L+ E LEQL+ L NG ++ V ++ A GVD ED+E
Sbjct: 187 IGIYAYRAGFLHDFVAWGPCWLEDTECLEQLRALYNGVRIHVADALEAPAAGVDTAEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|372269835|ref|ZP_09505883.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Marinobacterium
stanieri S30]
Length = 257
Score = 177 bits (449), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 102/249 (40%), Positives = 147/249 (59%), Gaps = 11/249 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR+ASSRF GKPL ++ GKPM+Q +ER+ + + +VVATDD++IA+ + FGA+
Sbjct: 6 IIPARYASSRFPGKPLADLNGKPMLQHVYERACESEAV-RVVVATDDQRIADVARGFGAE 64
Query: 113 VIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS +GT+R E +Q L DIVVN+QGDEP++ P II+ V L A P+A
Sbjct: 65 VCMTSSDHPSGTDRLQEVVQALGYYSDDIVVNVQGDEPMVPPRIINQVAHNLMAMPEAGI 124
Query: 172 STAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK-------SGKVNPQFPYLL 223
+T ++ E +PN VK V D G A+YFSR +P+ + + ++ F +
Sbjct: 125 ATLSEPIETVESLMNPNVVKVVTDTRGMAMYFSRAPMPWPRDAFMQGVTDEMPEGFDWQR 184
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDH-EAHGVDAPEDV 282
H+G+ +Y L + P PL+L E LEQL+ L NG + V D GVD PED+
Sbjct: 185 HIGLYAYRVKMLNDFVRWSPAPLELTECLEQLRALWNGVGIHVAVADEIPPAGVDTPEDL 244
Query: 283 EKIESFMRE 291
+I + M +
Sbjct: 245 ARIAAIMAQ 253
>gi|343516535|ref|ZP_08753570.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio sp. N418]
gi|342796120|gb|EGU31815.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio sp. N418]
Length = 249
Score = 177 bits (449), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 98/245 (40%), Positives = 144/245 (58%), Gaps = 6/245 (2%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ S+R GKPL +I GKPM+Q +E++ A D +++ATDDE++ + + FGA
Sbjct: 6 VIPARYQSTRLPGKPLADIGGKPMVQWVYEQAVQAGA-DQVIIATDDERVEQAAKAFGAQ 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS + +GTER E ++ + D I+VN+QGDEPLI P II V L + +
Sbjct: 65 VCMTSPNHESGTERLAEVVKLMGIADDHIIVNVQGDEPLIPPSIITQVADNLANSQAPMS 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF---PYLLHLGIQ 228
+ AV + F+PN VK + D GYA+YFSR IP+++ N P L H+GI
Sbjct: 125 TLAVEISDEAEVFNPNAVKVLTDKDGYAMYFSRATIPWDRDNFANNNTIAQPLLRHIGIY 184
Query: 229 SYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKIES 287
+Y + F+ Y P+ L+ E LEQL+VL G K+ V + + A GVD PED++ +
Sbjct: 185 AYRAGFINTYINWQPSALEKIECLEQLRVLWYGEKIHVAVAKEAPAAGVDTPEDLQAVRD 244
Query: 288 FMRER 292
+ R
Sbjct: 245 IIANR 249
>gi|240948351|ref|ZP_04752737.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Actinobacillus
minor NM305]
gi|240297390|gb|EER47931.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Actinobacillus
minor NM305]
Length = 252
Score = 177 bits (449), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 101/250 (40%), Positives = 146/250 (58%), Gaps = 19/250 (7%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR+ASSR KPL +I+GKPMIQ WE+++ A + +++ATD +I +QFGA+
Sbjct: 6 IIPARYASSRLPRKPLADIVGKPMIQHVWEKAQQAGA-NRVIIATDHPEIESVARQFGAE 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS+ +GTER E ++K++ D I+VNIQGDEPLI P I++ V + L +
Sbjct: 65 VCMTSDKHNSGTERLAEVVEKMQIADDEIIVNIQGDEPLIPPSIVEQVARNLAENQVNMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP----------- 220
+ AV E+ F+PN VK + D +G A+YFSR IP+ + FP
Sbjct: 125 TLAVKLTTREELFNPNVVKTLNDKNGMALYFSRAPIPFGRDN-----FPHCDDAFVQQQN 179
Query: 221 YLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAH-GVDAP 279
YL H+GI +Y ++F+K Y PT L+ E LEQL+ L G K+ + GVD
Sbjct: 180 YLRHIGIYAYRASFIKQYVAWQPTALEQLESLEQLRALWYGEKIHLALAKEAPQVGVDTL 239
Query: 280 EDVEKIESFM 289
ED+E++ +
Sbjct: 240 EDLERVRQIL 249
>gi|397657074|ref|YP_006497776.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella oxytoca
E718]
gi|394345581|gb|AFN31702.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella oxytoca
E718]
Length = 245
Score = 177 bits (449), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 102/246 (41%), Positives = 146/246 (59%), Gaps = 11/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPARFAS+R GKPL +I GKPMI ER++ + + ++VATD +A + G +
Sbjct: 3 IIPARFASTRLPGKPLQDINGKPMIVHVLERAR-ESGAERIIVATDHPDVARAVEAAGGE 61
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MT E ++GTER E ++K D I+VNIQGDEP+I P I+ V + L A+ +
Sbjct: 62 VCMTREDHQSGTERLAEVVEKCAFSDDTIIVNIQGDEPMIPPAIVRQVAENLAASTSGMA 121
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS------GKVNPQFPYLLHL 225
+ AV E+AF+PN VK V+D GYA+YFSR IP+++ G + L H+
Sbjct: 122 TLAVPIHDAEEAFNPNAVKVVMDAEGYALYFSRATIPWDRDRFAKSRGSIGDSL--LRHI 179
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVD-HEAHGVDAPEDVEK 284
GI Y + F++ Y P+PL+ E LEQL+VL G K+ V + GVD PED+E+
Sbjct: 180 GIYGYRAGFIRRYVSWAPSPLEQIEMLEQLRVLWYGEKIHVAVAEVVPGTGVDTPEDLER 239
Query: 285 IESFMR 290
+ + +R
Sbjct: 240 VRAELR 245
>gi|422590959|ref|ZP_16665609.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
syringae pv. morsprunorum str. M302280]
gi|330878262|gb|EGH12411.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
syringae pv. morsprunorum str. M302280]
Length = 254
Score = 177 bits (449), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 97/246 (39%), Positives = 144/246 (58%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ SSRF GKPL I GKPM+Q WE+++ ++ + +V+ATDD +I E C+ FGA+
Sbjct: 8 VIPARYGSSRFPGKPLKTIAGKPMVQLVWEQAR-KSSAERVVIATDDARIVEACRAFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V++T E +GT+R E +L D IVVN+QGDEP+I P +ID V L P+A
Sbjct: 67 VLLTREDHNSGTDRLAEVATQLGLAADAIVVNVQGDEPMIPPAVIDQVAANLAEHPEAGM 126
Query: 172 STAVTSLKPEDA-FDPNRVKCVVDNHGYAIYFSRGLIPYNKSG------KVNPQFPYLLH 224
+T + A F+PN VK D +G A+ FSR +P+ + ++ PY H
Sbjct: 127 ATLAEPIDDVVALFNPNIVKVSTDINGLALTFSRAPLPWARDALARSKDELPADVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDAPEDVE 283
+GI +Y + FL + P L+ E LEQL+ L NG ++ V ++ GVD PED+E
Sbjct: 187 IGIYAYRAGFLHDFVSWGPCWLENTESLEQLRALWNGVRIHVADALEAPPGGVDTPEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|206575785|ref|YP_002239434.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae 342]
gi|288936284|ref|YP_003440343.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Klebsiella
variicola At-22]
gi|238056512|sp|B5XY79.1|KDSB_KLEP3 RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|206564843|gb|ACI06619.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Klebsiella
pneumoniae 342]
gi|288890993|gb|ADC59311.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Klebsiella
variicola At-22]
Length = 248
Score = 177 bits (449), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 101/246 (41%), Positives = 147/246 (59%), Gaps = 7/246 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPARFAS+R GKPL +I GKPMI ER++ + D ++VATD +A + G
Sbjct: 4 VVIIPARFASTRLPGKPLQDINGKPMIVHVLERAR-ESGADRIIVATDHPDVASAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D I+VNIQGDEP+I P I+ V + L ++
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCAFSDDTIIVNIQGDEPMIPPAIVRQVAENLASSSSG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP----YLLHL 225
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ + + L H+
Sbjct: 123 MATLAVPIHDAEEAFNPNAVKVVMDAQGYALYFSRATIPWDRDRFAHSRETIGDSLLRHI 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI Y + F++ Y P+PL+ E LEQL+VL G K+ V + + GVD PED+E+
Sbjct: 183 GIYGYRAGFIRRYVSWAPSPLEQIEMLEQLRVLWYGEKIHVAVAAEVPGTGVDTPEDLER 242
Query: 285 IESFMR 290
+ + +R
Sbjct: 243 VRAELR 248
>gi|444377751|ref|ZP_21176959.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Enterovibrio sp.
AK16]
gi|443678122|gb|ELT84795.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Enterovibrio sp.
AK16]
Length = 250
Score = 177 bits (449), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 97/243 (39%), Positives = 147/243 (60%), Gaps = 7/243 (2%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ASSR KPLV+I GKPMIQ +E++ + + D +++ATDD++I + FG +
Sbjct: 6 VIPARYASSRLPAKPLVDIGGKPMIQWVYEQA-MKSGADKVIIATDDQRIVDAANAFGGE 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MT E ++GTER E ++K D I+VN+QGDEPLI P +I V + L + +
Sbjct: 65 VCMTREDHQSGTERLAEVVEKYNLAADEIIVNVQGDEPLIPPSVIRQVAENLARSEAPMS 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS--GKVNPQFPYLL--HLGI 227
+ A+ ++ F+PN VK V D GYA+YFSR IP+++ K + + L H+GI
Sbjct: 125 TLAINIDHVDEVFNPNAVKVVTDKDGYALYFSRATIPWDRDNFAKAPAEIHHNLKRHIGI 184
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKIE 286
Y + F+ Y P+P++ E LEQL+VL G K+ V + ++ GVD PED+E +
Sbjct: 185 YGYRAGFINTYINWEPSPIEHIECLEQLRVLWYGEKIHVDVAIEAPPAGVDTPEDLEVVR 244
Query: 287 SFM 289
+
Sbjct: 245 KLI 247
>gi|375264942|ref|YP_005022385.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio sp. EJY3]
gi|369842428|gb|AEX23572.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio sp. EJY3]
Length = 252
Score = 177 bits (449), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 101/244 (41%), Positives = 147/244 (60%), Gaps = 9/244 (3%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR++SSR GKPL +I GKPM+Q +E++ A D +++ATDDE+++ +QFG
Sbjct: 6 VIPARYSSSRLPGKPLADIGGKPMVQWVYEQAMQAGAED-VIIATDDERVSSAVEQFGGK 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS + +GTER E ++K+ D I+VN+QGDEPLI P II V L AA DA
Sbjct: 65 VCMTSPNHESGTERLAEVVEKMAIPADHIIVNVQGDEPLIPPSIIRQVADNL-AACDAPM 123
Query: 172 STAVTSLKPED-AFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ----FPYLLHLG 226
+T + ED F+PN VK V D+ GYA+YFSR IP+++ P + H+G
Sbjct: 124 ATLAVEIDSEDEVFNPNAVKVVADSRGYAMYFSRATIPWDRDNFAKQDKTIANPLMRHIG 183
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKI 285
I +Y + F+ Y P+ L+ E LEQL+VL G K+ V + + A GVD D++ +
Sbjct: 184 IYAYRAGFINTYINWAPSALEQIECLEQLRVLWYGEKIHVAVAKEAPAAGVDTQADLDAV 243
Query: 286 ESFM 289
+ +
Sbjct: 244 RAIV 247
>gi|284037684|ref|YP_003387614.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Spirosoma
linguale DSM 74]
gi|283816977|gb|ADB38815.1| 3-deoxy-D-manno-octulosonatecytidylyltransferase [Spirosoma
linguale DSM 74]
Length = 252
Score = 177 bits (449), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 96/246 (39%), Positives = 144/246 (58%), Gaps = 11/246 (4%)
Query: 50 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQF 109
++GIIPAR+ SSRF GKPL +I GK MIQR E++ A +L +VVATDD++IAE ++
Sbjct: 2 IIGIIPARYGSSRFPGKPLADIRGKSMIQRVLEQANQAESLAKVVVATDDDRIAEAVRRL 61
Query: 110 GADVIMTSESCRNGTERCNEALQKL-------EKKYDIVVNIQGDEPLIEPEIIDGVVKA 162
G + +MT +GT+RC EA +L D V+NIQGDEP ++P ID +
Sbjct: 62 GYEAVMTRVDHPSGTDRCWEAYDRLVADGVIVGNSTDYVLNIQGDEPFLDPAQIDELAAI 121
Query: 163 LQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPY---NKSGKVNPQF 219
L + + A E DP K V+++ A+YFSR +PY + + + +
Sbjct: 122 LDGSVELATQMATVD-SAEMLHDPKEAKIVINSQNEALYFSRSAVPYLWGVEPDQWHAKH 180
Query: 220 PYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAP 279
Y H+G+ +Y + L+ L P+PL+ E LEQL+ LE GY++K++ + + VD+P
Sbjct: 181 AYHRHVGLYAYRVDVLERLTQLPPSPLERAESLEQLRWLEAGYRIKLVPTNFQTPSVDSP 240
Query: 280 EDVEKI 285
ED+EKI
Sbjct: 241 EDIEKI 246
>gi|441502364|ref|ZP_20984375.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Photobacterium sp.
AK15]
gi|441430111|gb|ELR67562.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Photobacterium sp.
AK15]
Length = 248
Score = 177 bits (448), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 106/244 (43%), Positives = 148/244 (60%), Gaps = 9/244 (3%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR+ SSR GKPL +I GKPMIQ +E++ A + ++VATDD++IA+ + FG +
Sbjct: 6 IIPARYQSSRLPGKPLADIGGKPMIQWVYEQASKAGA-EQVIVATDDQRIADAVKSFGGE 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MT + +GTER E ++K + D IVVN+QGDEPLI II V L A DA
Sbjct: 65 VCMTRDDHESGTERLAEVVEKYQLADDQIVVNVQGDEPLIPDTIIRQVADNL-AHNDAPM 123
Query: 172 ST-AVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVN-PQ---FPYLLHLG 226
+T AV ++ F+PN VK V D +GYA+YFSR IP+++ PQ + H+G
Sbjct: 124 ATLAVEIDHADEVFNPNAVKVVTDKNGYALYFSRASIPWDRDNFAKRPQEIHHNLMRHIG 183
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKI 285
I +Y + F+ Y P+ L+ E LEQL+VL G K+ V + +D GVD PED+EK+
Sbjct: 184 IYAYRAGFINTYINWEPSALEKIEALEQLRVLWYGEKIHVEVAIDAPPAGVDTPEDLEKV 243
Query: 286 ESFM 289
+
Sbjct: 244 RELI 247
>gi|307257654|ref|ZP_07539413.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|306863829|gb|EFM95753.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
Length = 252
Score = 177 bits (448), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 103/248 (41%), Positives = 147/248 (59%), Gaps = 9/248 (3%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR+AS R KPL++ILGKPMIQ WER+K A +++ATD +IAE +FG +
Sbjct: 6 IIPARYASIRLPRKPLLDILGKPMIQHVWERAKQAGG-HRVIIATDHSEIAEVVTRFGGE 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V +TS+ +GTER E + K+ D I+VN+QGDEPLI P II V + L +
Sbjct: 65 VCLTSDKHSSGTERLAEVVSKMNISDDEIIVNVQGDEPLIPPCIIKQVAENLDNHQVNMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK------SGKVNPQFPYLLHL 225
+ AV + ++ F+PN VK + D +G A+YFSR IP+ + S Q YL H+
Sbjct: 125 TLAVKLTQRDELFNPNVVKVLSDKNGMALYFSRAAIPFARDNFPDCSDDFVTQNQYLRHI 184
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI +Y + F+K Y PT L+ E LEQL+ L NG K+ + I ++ GVD ED+E+
Sbjct: 185 GIYAYRAGFIKQYVQWQPTALEQLESLEQLRALWNGEKIHLDIALETPEVGVDTQEDLER 244
Query: 285 IESFMRER 292
+ + +
Sbjct: 245 VRLILSNK 252
>gi|86160591|ref|YP_467376.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Anaeromyxobacter
dehalogenans 2CP-C]
gi|123497267|sp|Q2IH80.1|KDSB_ANADE RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|85777102|gb|ABC83939.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Anaeromyxobacter
dehalogenans 2CP-C]
Length = 242
Score = 177 bits (448), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 93/231 (40%), Positives = 139/231 (60%), Gaps = 5/231 (2%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR+ ++RF GKPL ++ GKP+I ER++ A +D + VATDD++I + G +
Sbjct: 7 IIPARYGATRFPGKPLADLAGKPLIAHVVERAQRARGVDVVAVATDDDRIVRAVRAAGGE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFS 172
I+T + GT+R EA +KL + +IVVN+QGDEPLIEPE I+ V+ A+ A A +
Sbjct: 67 AILTGPAA-TGTDRVAEAARKLAPRPEIVVNLQGDEPLIEPEAIEAVIGAM--AGGARMA 123
Query: 173 TAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDS 232
T L + VK V G A+YFSR IP+ ++G +P H+GI ++ +
Sbjct: 124 TLARPLAEGELERTQVVKVVTRASGDALYFSRAPIPHRRAGGESPL--ARAHVGIYAFTA 181
Query: 233 NFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVE 283
FL+ + L P L+ EE LEQL+ LE+GY ++V + G+D P+D+E
Sbjct: 182 EFLETFTALAPGRLEGEEALEQLRALEHGYDIRVADTGYRGFGIDTPDDLE 232
>gi|157158835|ref|YP_001462136.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
E24377A]
gi|193070758|ref|ZP_03051693.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
E110019]
gi|209918168|ref|YP_002292252.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
SE11]
gi|218553505|ref|YP_002386418.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
IAI1]
gi|218694391|ref|YP_002402058.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
55989]
gi|293433215|ref|ZP_06661643.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
B088]
gi|300816978|ref|ZP_07097197.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 107-1]
gi|300823658|ref|ZP_07103785.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 119-7]
gi|307311695|ref|ZP_07591335.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
W]
gi|331667295|ref|ZP_08368160.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
TA271]
gi|331676706|ref|ZP_08377402.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
H591]
gi|378713676|ref|YP_005278569.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
KO11FL]
gi|386608286|ref|YP_006123772.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
W]
gi|386702110|ref|YP_006165947.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KO11FL]
gi|386708729|ref|YP_006172450.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
W]
gi|407468391|ref|YP_006785167.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. 2009EL-2071]
gi|407482877|ref|YP_006780026.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. 2011C-3493]
gi|410483429|ref|YP_006770975.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. 2009EL-2050]
gi|415875827|ref|ZP_11542477.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 79-10]
gi|417130761|ref|ZP_11976032.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
5.0588]
gi|417144930|ref|ZP_11986736.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
1.2264]
gi|417152904|ref|ZP_11991695.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
96.0497]
gi|417225366|ref|ZP_12028657.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
96.154]
gi|417241324|ref|ZP_12037270.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
9.0111]
gi|417580186|ref|ZP_12231003.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
STEC_B2F1]
gi|417601300|ref|ZP_12251880.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
STEC_94C]
gi|417607145|ref|ZP_12257664.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
STEC_DG131-3]
gi|417666126|ref|ZP_12315684.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
STEC_O31]
gi|417804298|ref|ZP_12451329.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. LB226692]
gi|417832051|ref|ZP_12478571.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. 01-09591]
gi|417864205|ref|ZP_12509252.1| hypothetical protein C22711_1138 [Escherichia coli O104:H4 str.
C227-11]
gi|418043062|ref|ZP_12681237.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
W26]
gi|418943116|ref|ZP_13496338.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O157:H43 str. T22]
gi|419344546|ref|ZP_13885928.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC13A]
gi|419348984|ref|ZP_13890337.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC13B]
gi|419354077|ref|ZP_13895353.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC13C]
gi|419359370|ref|ZP_13900595.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC13D]
gi|419364306|ref|ZP_13905483.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC13E]
gi|419374681|ref|ZP_13915729.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC14B]
gi|419379977|ref|ZP_13920944.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC14C]
gi|419385324|ref|ZP_13926212.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC14D]
gi|419804120|ref|ZP_14329283.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
AI27]
gi|419864957|ref|ZP_14387352.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O103:H25 str. CVM9340]
gi|419952021|ref|ZP_14468198.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
CUMT8]
gi|422352942|ref|ZP_16433710.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 117-3]
gi|422763010|ref|ZP_16816766.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
E1167]
gi|422775260|ref|ZP_16828916.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
H120]
gi|422991652|ref|ZP_16982423.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. C227-11]
gi|422993594|ref|ZP_16984358.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. C236-11]
gi|422998805|ref|ZP_16989561.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. 09-7901]
gi|423007266|ref|ZP_16998009.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. 04-8351]
gi|423008912|ref|ZP_16999650.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. 11-3677]
gi|423023100|ref|ZP_17013803.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. 11-4404]
gi|423028252|ref|ZP_17018945.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. 11-4522]
gi|423034086|ref|ZP_17024770.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. 11-4623]
gi|423036952|ref|ZP_17027626.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. 11-4632 C1]
gi|423042071|ref|ZP_17032738.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. 11-4632 C2]
gi|423048761|ref|ZP_17039418.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. 11-4632 C3]
gi|423052343|ref|ZP_17041151.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. 11-4632 C4]
gi|423059309|ref|ZP_17048105.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. 11-4632 C5]
gi|423708839|ref|ZP_17683217.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
B799]
gi|425421513|ref|ZP_18802720.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
0.1288]
gi|429723143|ref|ZP_19258032.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. Ec11-9450]
gi|429775317|ref|ZP_19307315.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. 11-02030]
gi|429780506|ref|ZP_19312455.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. 11-02033-1]
gi|429784557|ref|ZP_19316466.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. 11-02092]
gi|429789894|ref|ZP_19321766.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. 11-02093]
gi|429796124|ref|ZP_19327947.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. 11-02281]
gi|429802049|ref|ZP_19333824.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. 11-02318]
gi|429805681|ref|ZP_19337425.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. 11-02913]
gi|429811277|ref|ZP_19342976.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. 11-03439]
gi|429816628|ref|ZP_19348284.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. 11-04080]
gi|429821838|ref|ZP_19353449.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. 11-03943]
gi|429907505|ref|ZP_19373473.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. Ec11-9990]
gi|429911707|ref|ZP_19377663.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. Ec11-9941]
gi|429917541|ref|ZP_19383481.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. Ec11-4984]
gi|429922579|ref|ZP_19388500.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. Ec11-5604]
gi|429923432|ref|ZP_19389348.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. Ec11-4986]
gi|429932327|ref|ZP_19398221.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. Ec11-4987]
gi|429933929|ref|ZP_19399819.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. Ec11-4988]
gi|429939588|ref|ZP_19405462.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. Ec11-5603]
gi|429947230|ref|ZP_19413085.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. Ec11-6006]
gi|429949862|ref|ZP_19415710.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. Ec12-0465]
gi|429958140|ref|ZP_19423969.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. Ec12-0466]
gi|432376029|ref|ZP_19619037.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE12]
gi|432480294|ref|ZP_19722255.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE210]
gi|432673917|ref|ZP_19909404.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE142]
gi|432805044|ref|ZP_20038985.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE91]
gi|432830894|ref|ZP_20064476.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE135]
gi|432833999|ref|ZP_20067541.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE136]
gi|432933483|ref|ZP_20133151.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE184]
gi|432967015|ref|ZP_20155931.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE203]
gi|433091247|ref|ZP_20277541.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE138]
gi|433192911|ref|ZP_20376922.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE90]
gi|166987637|sp|A7ZK07.1|KDSB_ECO24 RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|226724285|sp|B7M847.1|KDSB_ECO8A RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|238056515|sp|B6I8Z0.1|KDSB_ECOSE RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|254807762|sp|B7LE16.1|KDSB_ECO55 RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|157080865|gb|ABV20573.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
E24377A]
gi|192955951|gb|EDV86419.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
E110019]
gi|209911427|dbj|BAG76501.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
SE11]
gi|218351123|emb|CAU96827.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
55989]
gi|218360273|emb|CAQ97823.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
IAI1]
gi|291324034|gb|EFE63456.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
B088]
gi|300523858|gb|EFK44927.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 119-7]
gi|300530330|gb|EFK51392.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 107-1]
gi|306908250|gb|EFN38749.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
W]
gi|315060203|gb|ADT74530.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
W]
gi|323379237|gb|ADX51505.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
KO11FL]
gi|323947293|gb|EGB43301.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
H120]
gi|324019073|gb|EGB88292.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 117-3]
gi|324117217|gb|EGC11125.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
E1167]
gi|331065651|gb|EGI37544.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
TA271]
gi|331075395|gb|EGI46693.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
H591]
gi|340735341|gb|EGR64399.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. 01-09591]
gi|340741162|gb|EGR75312.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. LB226692]
gi|341917494|gb|EGT67110.1| hypothetical protein C22711_1138 [Escherichia coli O104:H4 str.
C227-11]
gi|342929149|gb|EGU97871.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 79-10]
gi|345342531|gb|EGW74925.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
STEC_B2F1]
gi|345352697|gb|EGW84941.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
STEC_94C]
gi|345363736|gb|EGW95877.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
STEC_DG131-3]
gi|354856654|gb|EHF17112.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. 04-8351]
gi|354857901|gb|EHF18354.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. C227-11]
gi|354864669|gb|EHF25098.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. C236-11]
gi|354874982|gb|EHF35348.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. 09-7901]
gi|354878942|gb|EHF39289.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. 11-4404]
gi|354882734|gb|EHF43056.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. 11-3677]
gi|354884356|gb|EHF44669.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. 11-4522]
gi|354887413|gb|EHF47688.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. 11-4623]
gi|354900608|gb|EHF60742.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. 11-4632 C1]
gi|354903753|gb|EHF63853.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. 11-4632 C2]
gi|354906116|gb|EHF66198.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. 11-4632 C3]
gi|354917033|gb|EHF77003.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. 11-4632 C5]
gi|354921094|gb|EHF81019.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. 11-4632 C4]
gi|375321580|gb|EHS67403.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O157:H43 str. T22]
gi|378188974|gb|EHX49568.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC13A]
gi|378204646|gb|EHX65062.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC13B]
gi|378206470|gb|EHX66873.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC13C]
gi|378206829|gb|EHX67231.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC13D]
gi|378217629|gb|EHX77906.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC13E]
gi|378224049|gb|EHX84257.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC14B]
gi|378230872|gb|EHX90984.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC14C]
gi|378234773|gb|EHX94849.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC14D]
gi|383393637|gb|AFH18595.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KO11FL]
gi|383404421|gb|AFH10664.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
W]
gi|383474028|gb|EID66032.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
W26]
gi|384472915|gb|EIE56963.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
AI27]
gi|385707560|gb|EIG44591.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
B799]
gi|386153869|gb|EIH05150.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
5.0588]
gi|386164813|gb|EIH26599.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
1.2264]
gi|386169628|gb|EIH36136.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
96.0497]
gi|386200414|gb|EIH99405.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
96.154]
gi|386212005|gb|EII22454.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
9.0111]
gi|388338648|gb|EIL05096.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O103:H25 str. CVM9340]
gi|388413171|gb|EIL73181.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
CUMT8]
gi|397786230|gb|EJK97070.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
STEC_O31]
gi|406778591|gb|AFS58015.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. 2009EL-2050]
gi|407055174|gb|AFS75225.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. 2011C-3493]
gi|407064426|gb|AFS85473.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. 2009EL-2071]
gi|408347177|gb|EKJ61411.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
0.1288]
gi|429350052|gb|EKY86787.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. 11-02030]
gi|429350764|gb|EKY87489.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. 11-02033-1]
gi|429351142|gb|EKY87863.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. 11-02092]
gi|429365420|gb|EKZ02033.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. 11-02093]
gi|429366371|gb|EKZ02974.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. 11-02281]
gi|429368934|gb|EKZ05517.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. 11-02318]
gi|429381341|gb|EKZ17828.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. 11-02913]
gi|429382309|gb|EKZ18774.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. 11-03439]
gi|429383357|gb|EKZ19817.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. 11-03943]
gi|429395575|gb|EKZ31941.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. 11-04080]
gi|429396789|gb|EKZ33137.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. Ec11-9450]
gi|429397667|gb|EKZ34013.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. Ec11-9990]
gi|429409395|gb|EKZ45625.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. Ec11-4984]
gi|429417855|gb|EKZ54002.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. Ec11-4987]
gi|429421524|gb|EKZ57645.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. Ec11-4988]
gi|429423264|gb|EKZ59372.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. Ec11-4986]
gi|429427266|gb|EKZ63351.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. Ec11-5603]
gi|429434148|gb|EKZ70177.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. Ec11-5604]
gi|429438135|gb|EKZ74129.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. Ec12-0465]
gi|429443491|gb|EKZ79443.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. Ec11-6006]
gi|429449594|gb|EKZ85493.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. Ec12-0466]
gi|429455169|gb|EKZ91026.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O104:H4 str. Ec11-9941]
gi|430900657|gb|ELC22675.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE12]
gi|431009241|gb|ELD23861.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE210]
gi|431217038|gb|ELF14628.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE142]
gi|431356656|gb|ELG43346.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE91]
gi|431379240|gb|ELG64174.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE135]
gi|431386880|gb|ELG70833.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE136]
gi|431455125|gb|ELH35481.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE184]
gi|431472987|gb|ELH52821.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE203]
gi|431613211|gb|ELI82411.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE138]
gi|431719794|gb|ELJ83844.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE90]
Length = 248
Score = 177 bits (448), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 103/246 (41%), Positives = 145/246 (58%), Gaps = 7/246 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPAR+AS+R GKPLV+I GKPMI ER++ + D ++VATD E +A + G
Sbjct: 4 VVIIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGADRIIVATDHEDVARAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D ++VN+QGDEP+I II V L
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS----GKVNPQFPYLLHL 225
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ G +L HL
Sbjct: 123 MATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAEGLETVGDNFLRHL 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI Y + F++ Y P+PL+ E LEQL+VL G K+ V + + GVD PED+E+
Sbjct: 183 GIYGYRAGFIRRYVNWQPSPLEHIEMLEQLRVLWYGEKIHVAVAQEVPGTGVDTPEDLER 242
Query: 285 IESFMR 290
+ + MR
Sbjct: 243 VRAEMR 248
>gi|15800779|ref|NP_286793.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O157:H7 str. EDL933]
gi|15830255|ref|NP_309028.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O157:H7 str. Sakai]
gi|168751181|ref|ZP_02776203.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
O157:H7 str. EC4113]
gi|168757010|ref|ZP_02782017.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
O157:H7 str. EC4401]
gi|168762945|ref|ZP_02787952.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
O157:H7 str. EC4501]
gi|168769913|ref|ZP_02794920.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
O157:H7 str. EC4486]
gi|168776229|ref|ZP_02801236.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
O157:H7 str. EC4196]
gi|168784115|ref|ZP_02809122.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
O157:H7 str. EC4076]
gi|168787347|ref|ZP_02812354.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
O157:H7 str. EC869]
gi|168801397|ref|ZP_02826404.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
O157:H7 str. EC508]
gi|195940075|ref|ZP_03085457.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O157:H7 str. EC4024]
gi|208808851|ref|ZP_03251188.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
O157:H7 str. EC4206]
gi|208815377|ref|ZP_03256556.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
O157:H7 str. EC4045]
gi|208822571|ref|ZP_03262890.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
O157:H7 str. EC4042]
gi|209399180|ref|YP_002269590.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O157:H7 str. EC4115]
gi|217325627|ref|ZP_03441711.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
O157:H7 str. TW14588]
gi|254792117|ref|YP_003076954.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O157:H7 str. TW14359]
gi|261227421|ref|ZP_05941702.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O157:H7 str. FRIK2000]
gi|261256156|ref|ZP_05948689.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O157:H7 str. FRIK966]
gi|291281919|ref|YP_003498737.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O55:H7 str. CB9615]
gi|293414198|ref|ZP_06656847.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
B185]
gi|387506029|ref|YP_006158285.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O55:H7 str. RM12579]
gi|387881530|ref|YP_006311832.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
Xuzhou21]
gi|416309421|ref|ZP_11655793.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O157:H7 str. 1044]
gi|416317300|ref|ZP_11660341.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O157:H7 str. EC1212]
gi|416332059|ref|ZP_11670138.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O157:H7 str. 1125]
gi|416782025|ref|ZP_11877494.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O157:H7 str. G5101]
gi|416793257|ref|ZP_11882418.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O157:H- str. 493-89]
gi|416804523|ref|ZP_11887278.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O157:H- str. H 2687]
gi|416815646|ref|ZP_11891984.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O55:H7 str. 3256-97]
gi|416825381|ref|ZP_11896569.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O55:H7 str. USDA 5905]
gi|416836225|ref|ZP_11901840.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O157:H7 str. LSU-61]
gi|417627852|ref|ZP_12278099.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
STEC_MHI813]
gi|419044128|ref|ZP_13591099.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC3A]
gi|419049572|ref|ZP_13596488.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC3B]
gi|419055653|ref|ZP_13602506.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC3C]
gi|419061224|ref|ZP_13608003.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC3D]
gi|419067498|ref|ZP_13613911.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC3E]
gi|419074038|ref|ZP_13619606.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC3F]
gi|419079334|ref|ZP_13624816.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC4A]
gi|419084973|ref|ZP_13630382.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC4B]
gi|419091079|ref|ZP_13636396.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC4C]
gi|419096874|ref|ZP_13642116.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC4D]
gi|419102711|ref|ZP_13647876.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC4E]
gi|419108215|ref|ZP_13653321.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC4F]
gi|419113843|ref|ZP_13658873.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC5A]
gi|419119478|ref|ZP_13664456.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC5B]
gi|419125280|ref|ZP_13670176.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC5C]
gi|419130727|ref|ZP_13675574.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC5D]
gi|419135456|ref|ZP_13680262.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC5E]
gi|420268132|ref|ZP_14770536.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
PA22]
gi|420274018|ref|ZP_14776349.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
PA40]
gi|420279101|ref|ZP_14781366.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
TW06591]
gi|420285392|ref|ZP_14787607.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
TW10246]
gi|420291133|ref|ZP_14793296.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
TW11039]
gi|420296925|ref|ZP_14799017.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
TW09109]
gi|420302719|ref|ZP_14804745.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
TW10119]
gi|420308370|ref|ZP_14810341.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
EC1738]
gi|420313949|ref|ZP_14815854.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
EC1734]
gi|421813009|ref|ZP_16248733.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
8.0416]
gi|421817280|ref|ZP_16252834.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
10.0821]
gi|421822685|ref|ZP_16258121.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
FRIK920]
gi|421829421|ref|ZP_16264748.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
PA7]
gi|423665445|ref|ZP_17640583.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
PA31]
gi|424075871|ref|ZP_17813209.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
FDA505]
gi|424082219|ref|ZP_17819070.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
FDA517]
gi|424088866|ref|ZP_17825111.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
FRIK1996]
gi|424095070|ref|ZP_17830813.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
FRIK1985]
gi|424101513|ref|ZP_17836655.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
FRIK1990]
gi|424116427|ref|ZP_17850291.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
PA3]
gi|424120325|ref|ZP_17854016.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
PA5]
gi|424132660|ref|ZP_17865451.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
PA10]
gi|424145644|ref|ZP_17877403.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
PA15]
gi|424151780|ref|ZP_17883024.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
PA24]
gi|424190268|ref|ZP_17888461.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
PA25]
gi|424271838|ref|ZP_17894369.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
PA28]
gi|424425931|ref|ZP_17900096.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
PA32]
gi|424460525|ref|ZP_17911431.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
PA39]
gi|424466977|ref|ZP_17917155.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
PA41]
gi|424473536|ref|ZP_17923196.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
PA42]
gi|424479467|ref|ZP_17928706.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
TW07945]
gi|424485541|ref|ZP_17934394.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
TW09098]
gi|424491741|ref|ZP_17940067.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
TW09195]
gi|424498756|ref|ZP_17946018.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
EC4203]
gi|424507315|ref|ZP_17953745.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
EC4196]
gi|424511251|ref|ZP_17957458.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
TW14313]
gi|424518776|ref|ZP_17963200.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
TW14301]
gi|424524637|ref|ZP_17968650.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
EC4421]
gi|424530842|ref|ZP_17974457.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
EC4422]
gi|424536816|ref|ZP_17980066.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
EC4013]
gi|424542750|ref|ZP_17985544.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
EC4402]
gi|424549056|ref|ZP_17991244.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
EC4439]
gi|424555301|ref|ZP_17997013.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
EC4436]
gi|424561656|ref|ZP_18002936.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
EC4437]
gi|424573881|ref|ZP_18014290.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
EC1845]
gi|424579827|ref|ZP_18019748.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
EC1863]
gi|425096501|ref|ZP_18499513.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
3.4870]
gi|425102646|ref|ZP_18505284.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
5.2239]
gi|425108447|ref|ZP_18510685.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
6.0172]
gi|425126608|ref|ZP_18527804.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
8.0586]
gi|425130311|ref|ZP_18531400.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
8.2524]
gi|425136677|ref|ZP_18537391.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
10.0833]
gi|425142516|ref|ZP_18542803.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
10.0869]
gi|425148866|ref|ZP_18548743.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
88.0221]
gi|425154469|ref|ZP_18554011.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
PA34]
gi|425160917|ref|ZP_18560088.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
FDA506]
gi|425166445|ref|ZP_18565246.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
FDA507]
gi|425172731|ref|ZP_18571120.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
FDA504]
gi|425178621|ref|ZP_18576662.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
FRIK1999]
gi|425191586|ref|ZP_18588701.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
NE1487]
gi|425197867|ref|ZP_18594508.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
NE037]
gi|425204544|ref|ZP_18600664.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
FRIK2001]
gi|425210252|ref|ZP_18605978.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
PA4]
gi|425216306|ref|ZP_18611611.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
PA23]
gi|425222887|ref|ZP_18617729.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
PA49]
gi|425229112|ref|ZP_18623495.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
PA45]
gi|425235417|ref|ZP_18629371.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
TT12B]
gi|425241434|ref|ZP_18635062.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MA6]
gi|425247541|ref|ZP_18640736.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
5905]
gi|425253297|ref|ZP_18646155.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
CB7326]
gi|425259551|ref|ZP_18651910.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
EC96038]
gi|425265757|ref|ZP_18657658.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
5412]
gi|425293139|ref|ZP_18683703.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
PA38]
gi|425309867|ref|ZP_18699321.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
EC1735]
gi|425315792|ref|ZP_18704854.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
EC1736]
gi|425321860|ref|ZP_18710516.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
EC1737]
gi|425328051|ref|ZP_18716255.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
EC1846]
gi|425334236|ref|ZP_18721936.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
EC1847]
gi|425340648|ref|ZP_18727873.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
EC1848]
gi|425352748|ref|ZP_18739112.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
EC1850]
gi|425358737|ref|ZP_18744694.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
EC1856]
gi|425364856|ref|ZP_18750379.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
EC1862]
gi|425371299|ref|ZP_18756245.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
EC1864]
gi|425384090|ref|ZP_18767953.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
EC1866]
gi|425390783|ref|ZP_18774222.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
EC1868]
gi|425396899|ref|ZP_18779928.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
EC1869]
gi|425402886|ref|ZP_18785477.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
EC1870]
gi|425409438|ref|ZP_18791575.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
NE098]
gi|425415707|ref|ZP_18797327.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
FRIK523]
gi|425426840|ref|ZP_18807879.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
0.1304]
gi|428951671|ref|ZP_19023776.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
88.1042]
gi|428957532|ref|ZP_19029198.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
89.0511]
gi|428963874|ref|ZP_19035035.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
90.0091]
gi|428970004|ref|ZP_19040617.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
90.0039]
gi|428976433|ref|ZP_19046586.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
90.2281]
gi|428982057|ref|ZP_19051774.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
93.0055]
gi|428988462|ref|ZP_19057729.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
93.0056]
gi|428994264|ref|ZP_19063155.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
94.0618]
gi|429000405|ref|ZP_19068889.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
95.0183]
gi|429006592|ref|ZP_19074476.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
95.1288]
gi|429012921|ref|ZP_19080156.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
95.0943]
gi|429019044|ref|ZP_19085809.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
96.0428]
gi|429024842|ref|ZP_19091231.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
96.0427]
gi|429033360|ref|ZP_19098902.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
96.0939]
gi|429039461|ref|ZP_19104594.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
96.0932]
gi|429043294|ref|ZP_19108273.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
96.0107]
gi|429049026|ref|ZP_19113677.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
97.0003]
gi|429054418|ref|ZP_19118885.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
97.1742]
gi|429060066|ref|ZP_19124196.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
97.0007]
gi|429065592|ref|ZP_19129431.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
99.0672]
gi|429072092|ref|ZP_19135438.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
99.0678]
gi|429077420|ref|ZP_19140627.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
99.0713]
gi|429824663|ref|ZP_19356133.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
96.0109]
gi|429831024|ref|ZP_19361833.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
97.0010]
gi|432453691|ref|ZP_19695928.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE193]
gi|432749399|ref|ZP_19984011.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE29]
gi|432946224|ref|ZP_20141853.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE196]
gi|433032422|ref|ZP_20220194.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE112]
gi|433042428|ref|ZP_20229948.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE117]
gi|444923369|ref|ZP_21243046.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
09BKT078844]
gi|444929658|ref|ZP_21248797.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
99.0814]
gi|444936745|ref|ZP_21255540.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
99.0815]
gi|444946105|ref|ZP_21264514.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
99.0839]
gi|444957160|ref|ZP_21275144.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
99.1753]
gi|444962443|ref|ZP_21280177.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
99.1775]
gi|444968169|ref|ZP_21285635.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
99.1793]
gi|444973667|ref|ZP_21290934.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
99.1805]
gi|444979343|ref|ZP_21296327.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
ATCC 700728]
gi|444984504|ref|ZP_21301363.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
PA11]
gi|444989751|ref|ZP_21306481.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
PA19]
gi|444996752|ref|ZP_21313263.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
PA13]
gi|445000629|ref|ZP_21317082.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
PA2]
gi|445006067|ref|ZP_21322397.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
PA47]
gi|445011179|ref|ZP_21327363.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
PA48]
gi|445018717|ref|ZP_21334693.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
PA8]
gi|445022447|ref|ZP_21338361.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
7.1982]
gi|445027716|ref|ZP_21343481.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
99.1781]
gi|445033208|ref|ZP_21348819.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
99.1762]
gi|445038895|ref|ZP_21354356.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
PA35]
gi|445044200|ref|ZP_21359526.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
3.4880]
gi|445049694|ref|ZP_21364846.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
95.0083]
gi|445055353|ref|ZP_21370292.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
99.0670]
gi|452967498|ref|ZP_21965725.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O157:H7 str. EC4009]
gi|22095796|sp|Q8XDG6.3|KDSB_ECO57 RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|238056514|sp|B5YT52.1|KDSB_ECO5E RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|12514087|gb|AAG55403.1|AE005281_6 CTP:CMP-3-deoxy-D-manno-octulosonate transferase [Escherichia coli
O157:H7 str. EDL933]
gi|13360460|dbj|BAB34424.1| CTP:CMP-3-deoxy-D-manno-octulosonate transferase [Escherichia coli
O157:H7 str. Sakai]
gi|187768346|gb|EDU32190.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
O157:H7 str. EC4196]
gi|188014719|gb|EDU52841.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
O157:H7 str. EC4113]
gi|188998658|gb|EDU67644.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
O157:H7 str. EC4076]
gi|189355899|gb|EDU74318.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
O157:H7 str. EC4401]
gi|189361176|gb|EDU79595.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
O157:H7 str. EC4486]
gi|189366823|gb|EDU85239.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
O157:H7 str. EC4501]
gi|189372629|gb|EDU91045.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
O157:H7 str. EC869]
gi|189376445|gb|EDU94861.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
O157:H7 str. EC508]
gi|208728652|gb|EDZ78253.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
O157:H7 str. EC4206]
gi|208732025|gb|EDZ80713.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
O157:H7 str. EC4045]
gi|208738056|gb|EDZ85739.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
O157:H7 str. EC4042]
gi|209160580|gb|ACI38013.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
O157:H7 str. EC4115]
gi|209774808|gb|ACI85716.1| CTP:CMP-3-deoxy-D-manno-octulosonate transferase [Escherichia coli]
gi|209774810|gb|ACI85717.1| CTP:CMP-3-deoxy-D-manno-octulosonate transferase [Escherichia coli]
gi|209774812|gb|ACI85718.1| CTP:CMP-3-deoxy-D-manno-octulosonate transferase [Escherichia coli]
gi|209774814|gb|ACI85719.1| CTP:CMP-3-deoxy-D-manno-octulosonate transferase [Escherichia coli]
gi|209774816|gb|ACI85720.1| CTP:CMP-3-deoxy-D-manno-octulosonate transferase [Escherichia coli]
gi|217321848|gb|EEC30272.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
O157:H7 str. TW14588]
gi|254591517|gb|ACT70878.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O157:H7 str. TW14359]
gi|290761792|gb|ADD55753.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O55:H7 str. CB9615]
gi|291434256|gb|EFF07229.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
B185]
gi|320192596|gb|EFW67237.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O157:H7 str. EC1212]
gi|320637786|gb|EFX07578.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O157:H7 str. G5101]
gi|320642911|gb|EFX12112.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O157:H- str. 493-89]
gi|320648368|gb|EFX17023.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O157:H- str. H 2687]
gi|320653684|gb|EFX21758.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O55:H7 str. 3256-97 TW 07815]
gi|320659829|gb|EFX27385.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O55:H7 str. USDA 5905]
gi|320664298|gb|EFX31449.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O157:H7 str. LSU-61]
gi|326338187|gb|EGD62016.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O157:H7 str. 1125]
gi|326346164|gb|EGD69902.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O157:H7 str. 1044]
gi|345378156|gb|EGX10087.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
STEC_MHI813]
gi|374358023|gb|AEZ39730.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O55:H7 str. RM12579]
gi|377899747|gb|EHU64093.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC3A]
gi|377901634|gb|EHU65950.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC3B]
gi|377913245|gb|EHU77389.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC3C]
gi|377917310|gb|EHU81375.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC3D]
gi|377918934|gb|EHU82978.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC3E]
gi|377931014|gb|EHU94884.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC3F]
gi|377933441|gb|EHU97286.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC4A]
gi|377938345|gb|EHV02113.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC4B]
gi|377949238|gb|EHV12878.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC4C]
gi|377950312|gb|EHV13940.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC4D]
gi|377953879|gb|EHV17443.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC4E]
gi|377964543|gb|EHV27978.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC5A]
gi|377965357|gb|EHV28777.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC4F]
gi|377971121|gb|EHV34478.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC5B]
gi|377978075|gb|EHV41355.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC5C]
gi|377979298|gb|EHV42575.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC5D]
gi|377986605|gb|EHV49795.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC5E]
gi|386794988|gb|AFJ28022.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
Xuzhou21]
gi|390649744|gb|EIN28224.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
FRIK1996]
gi|390651825|gb|EIN30095.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
FDA517]
gi|390652140|gb|EIN30375.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
FDA505]
gi|390671699|gb|EIN48083.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
FRIK1990]
gi|390672253|gb|EIN48563.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
FRIK1985]
gi|390677859|gb|EIN53859.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
PA3]
gi|390691247|gb|EIN66005.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
PA5]
gi|390707419|gb|EIN80769.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
PA10]
gi|390709213|gb|EIN82330.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
PA15]
gi|390719439|gb|EIN92164.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
PA22]
gi|390732402|gb|EIO04088.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
PA24]
gi|390732490|gb|EIO04175.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
PA25]
gi|390735323|gb|EIO06717.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
PA28]
gi|390750769|gb|EIO20760.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
PA31]
gi|390751184|gb|EIO21112.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
PA32]
gi|390761775|gb|EIO31051.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
PA40]
gi|390775165|gb|EIO43239.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
PA41]
gi|390776882|gb|EIO44761.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
PA42]
gi|390780677|gb|EIO48375.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
PA39]
gi|390784811|gb|EIO52367.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
TW06591]
gi|390794255|gb|EIO61554.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
TW10246]
gi|390801164|gb|EIO68230.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
TW11039]
gi|390808118|gb|EIO74964.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
TW07945]
gi|390811163|gb|EIO77887.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
TW09109]
gi|390818544|gb|EIO84913.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
TW10119]
gi|390821399|gb|EIO87589.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
TW09098]
gi|390831678|gb|EIO97046.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
EC4196]
gi|390836349|gb|EIP00902.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
EC4203]
gi|390839225|gb|EIP03362.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
TW09195]
gi|390854875|gb|EIP17652.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
TW14301]
gi|390857267|gb|EIP19715.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
TW14313]
gi|390857817|gb|EIP20243.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
EC4421]
gi|390870645|gb|EIP32146.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
EC4422]
gi|390875088|gb|EIP36170.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
EC4013]
gi|390884610|gb|EIP44901.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
EC4402]
gi|390887118|gb|EIP47113.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
EC4439]
gi|390892705|gb|EIP52276.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
EC4436]
gi|390903273|gb|EIP62328.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
EC1738]
gi|390908573|gb|EIP67396.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
EC4437]
gi|390911443|gb|EIP70148.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
EC1734]
gi|390924241|gb|EIP82043.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
EC1863]
gi|390925649|gb|EIP83283.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
EC1845]
gi|408071748|gb|EKH06083.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
PA7]
gi|408075301|gb|EKH09537.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
FRIK920]
gi|408085520|gb|EKH19144.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
PA34]
gi|408089358|gb|EKH22689.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
FDA506]
gi|408094152|gb|EKH27197.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
FDA507]
gi|408101189|gb|EKH33658.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
FDA504]
gi|408109156|gb|EKH41087.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
FRIK1999]
gi|408120680|gb|EKH51655.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
NE1487]
gi|408128916|gb|EKH59165.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
NE037]
gi|408131140|gb|EKH61201.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
FRIK2001]
gi|408140159|gb|EKH69694.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
PA4]
gi|408149573|gb|EKH78251.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
PA23]
gi|408151310|gb|EKH79818.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
PA49]
gi|408156578|gb|EKH84780.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
PA45]
gi|408166289|gb|EKH93907.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
TT12B]
gi|408170783|gb|EKH97938.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MA6]
gi|408172995|gb|EKI00048.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
5905]
gi|408186042|gb|EKI12156.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
CB7326]
gi|408190040|gb|EKI15716.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
5412]
gi|408190586|gb|EKI16231.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
EC96038]
gi|408231553|gb|EKI54820.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
PA38]
gi|408237520|gb|EKI60375.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
EC1735]
gi|408248332|gb|EKI70387.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
EC1736]
gi|408251987|gb|EKI73696.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
EC1737]
gi|408258195|gb|EKI79478.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
EC1846]
gi|408267137|gb|EKI87606.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
EC1847]
gi|408268813|gb|EKI89142.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
EC1848]
gi|408284188|gb|EKJ03317.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
EC1850]
gi|408286762|gb|EKJ05681.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
EC1856]
gi|408299209|gb|EKJ17038.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
EC1862]
gi|408299683|gb|EKJ17454.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
EC1864]
gi|408315361|gb|EKJ31680.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
EC1868]
gi|408316045|gb|EKJ32343.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
EC1866]
gi|408330586|gb|EKJ45849.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
EC1869]
gi|408335217|gb|EKJ50068.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
NE098]
gi|408337121|gb|EKJ51867.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
EC1870]
gi|408349800|gb|EKJ63722.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
FRIK523]
gi|408352728|gb|EKJ66272.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
0.1304]
gi|408557642|gb|EKK34074.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
5.2239]
gi|408557861|gb|EKK34283.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
3.4870]
gi|408558565|gb|EKK34929.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
6.0172]
gi|408570133|gb|EKK46113.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
8.0586]
gi|408588701|gb|EKK63273.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
8.2524]
gi|408589705|gb|EKK64207.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
10.0833]
gi|408601315|gb|EKK75118.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
8.0416]
gi|408603520|gb|EKK77161.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
10.0869]
gi|408606774|gb|EKK80200.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
88.0221]
gi|408616219|gb|EKK89378.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
10.0821]
gi|427213415|gb|EKV82824.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
88.1042]
gi|427215274|gb|EKV84460.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
89.0511]
gi|427232788|gb|EKW00594.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
90.2281]
gi|427233137|gb|EKW00923.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
90.0039]
gi|427234760|gb|EKW02437.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
90.0091]
gi|427250516|gb|EKW17187.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
93.0056]
gi|427251941|gb|EKW18463.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
93.0055]
gi|427253376|gb|EKW19818.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
94.0618]
gi|427269297|gb|EKW34263.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
95.0183]
gi|427269436|gb|EKW34397.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
95.0943]
gi|427273592|gb|EKW38271.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
95.1288]
gi|427283322|gb|EKW47530.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
96.0939]
gi|427285702|gb|EKW49641.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
96.0428]
gi|427291014|gb|EKW54464.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
96.0427]
gi|427292086|gb|EKW55442.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
96.0932]
gi|427304149|gb|EKW66819.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
97.0003]
gi|427309289|gb|EKW71611.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
96.0107]
gi|427320277|gb|EKW82051.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
97.1742]
gi|427321152|gb|EKW82855.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
97.0007]
gi|427333074|gb|EKW94188.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
99.0713]
gi|427333523|gb|EKW94628.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
99.0678]
gi|427336240|gb|EKW97219.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
99.0672]
gi|429259422|gb|EKY43119.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
96.0109]
gi|429261285|gb|EKY44735.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
97.0010]
gi|430973830|gb|ELC90775.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE193]
gi|431298689|gb|ELF88313.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE29]
gi|431461599|gb|ELH41866.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE196]
gi|431558537|gb|ELI32155.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE112]
gi|431559207|gb|ELI32778.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE117]
gi|444541793|gb|ELV21237.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
99.0814]
gi|444547723|gb|ELV26280.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
99.0815]
gi|444549357|gb|ELV27607.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
09BKT078844]
gi|444563979|gb|ELV40948.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
99.0839]
gi|444580866|gb|ELV56752.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
99.1753]
gi|444584059|gb|ELV59730.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
99.1775]
gi|444585364|gb|ELV60942.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
99.1793]
gi|444598519|gb|ELV73438.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
ATCC 700728]
gi|444599050|gb|ELV73949.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
PA11]
gi|444606645|gb|ELV81252.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
99.1805]
gi|444607308|gb|ELV81886.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
PA13]
gi|444613046|gb|ELV87310.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
PA19]
gi|444621598|gb|ELV95573.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
PA2]
gi|444630113|gb|ELW03778.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
PA8]
gi|444631320|gb|ELW04924.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
PA48]
gi|444631583|gb|ELW05181.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
PA47]
gi|444646730|gb|ELW19732.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
7.1982]
gi|444648798|gb|ELW21712.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
99.1781]
gi|444652216|gb|ELW24984.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
99.1762]
gi|444661585|gb|ELW33881.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
PA35]
gi|444665781|gb|ELW37880.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
3.4880]
gi|444671764|gb|ELW43546.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
95.0083]
gi|444673891|gb|ELW45487.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
99.0670]
Length = 248
Score = 177 bits (448), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 105/247 (42%), Positives = 146/247 (59%), Gaps = 9/247 (3%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPAR+AS+R GKPLV+I GKPMI ER++ + + ++VATD E +A + G
Sbjct: 4 VVIIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGAERIIVATDHEDVARAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D ++VN+QGDEP+I II V L
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS----GKVNPQFPYLLHL 225
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ G +L HL
Sbjct: 123 MATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAKGLETVGDNFLRHL 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHE--AHGVDAPEDVE 283
GI Y + F++ Y P+PL+ E LEQL+VL G K+ V V HE GVD PED+E
Sbjct: 183 GIYGYRAGFIRRYVTWQPSPLEHIEMLEQLRVLWYGEKIHV-AVAHEVPGTGVDTPEDLE 241
Query: 284 KIESFMR 290
++ + MR
Sbjct: 242 RVRAEMR 248
>gi|300949719|ref|ZP_07163698.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 116-1]
gi|300955434|ref|ZP_07167808.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 175-1]
gi|417289969|ref|ZP_12077252.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
B41]
gi|417617378|ref|ZP_12267808.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
G58-1]
gi|419940904|ref|ZP_14457621.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
75]
gi|422770151|ref|ZP_16823842.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
E482]
gi|432736418|ref|ZP_19971189.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE42]
gi|300317657|gb|EFJ67441.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 175-1]
gi|300450900|gb|EFK14520.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 116-1]
gi|323942834|gb|EGB38999.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
E482]
gi|345380550|gb|EGX12449.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
G58-1]
gi|386256007|gb|EIJ05695.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
B41]
gi|388401969|gb|EIL62570.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
75]
gi|431285958|gb|ELF76793.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE42]
Length = 248
Score = 177 bits (448), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 103/246 (41%), Positives = 146/246 (59%), Gaps = 7/246 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPAR+AS+R GKPLV+I GKPMI ER++ + + ++VATD E +A + G
Sbjct: 4 VVIIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGAERIIVATDHEDVARAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MTS ++GTER E ++K D ++VN+QGDEP+I II V L
Sbjct: 63 GEVCMTSADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS----GKVNPQFPYLLHL 225
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ G +L HL
Sbjct: 123 MATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAEGLETVGDNFLRHL 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI Y + F++ Y P+PL+ E LEQL+VL G K+ V + + GVD PED+E+
Sbjct: 183 GIYGYRAGFIRRYVNWQPSPLEHIEMLEQLRVLWYGEKIHVAVAQEVPGTGVDTPEDLER 242
Query: 285 IESFMR 290
+ + MR
Sbjct: 243 VRAEMR 248
>gi|398988275|ref|ZP_10692322.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas sp.
GM24]
gi|399011000|ref|ZP_10713333.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas sp.
GM16]
gi|398118338|gb|EJM08069.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas sp.
GM16]
gi|398149773|gb|EJM38408.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas sp.
GM24]
Length = 254
Score = 177 bits (448), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 102/246 (41%), Positives = 148/246 (60%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IP+RFAS+R GKPL++I GKPMIQ WE++ ++ +VVATDD +I E C+ FGA+
Sbjct: 8 VIPSRFASTRLPGKPLLDIAGKPMIQHVWEQAS-KSSASRVVVATDDARIVEACKAFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V++T E +GT+R E KL + D IVVN+QGDEPLI P +ID V L A +A
Sbjct: 67 VVLTREDHNSGTDRLAEVAAKLGLEPDAIVVNVQGDEPLIPPSVIDQVAANLAAHTEARM 126
Query: 172 STAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPY-----NKSGKVNPQ-FPYLLH 224
+T ++ E F+PN VK V D +G A+ FSR +P+ KS + P+ PY H
Sbjct: 127 ATLAEPIEDVETLFNPNVVKVVSDINGLALTFSRATLPWARDAFAKSREQLPEGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDAPEDVE 283
+GI +Y + FL+ + P L+ E LEQL+ L +G ++ V + GVD ED+E
Sbjct: 187 IGIYAYRAGFLQDFVNWGPCWLENTESLEQLRALWHGVRIHVADALIAPPTGVDTVEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|352107061|ref|ZP_08961748.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Halomonas sp.
HAL1]
gi|350597406|gb|EHA13547.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Halomonas sp.
HAL1]
Length = 428
Score = 177 bits (448), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 91/241 (37%), Positives = 145/241 (60%), Gaps = 4/241 (1%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
RV IIPAR+ SSR GKPL ++LGKPM+Q +E+++ + +VVATDD++I +
Sbjct: 6 RVALIIPARYGSSRLPGKPLADLLGKPMVQWVYEKAQQVPSASTVVVATDDQRIVDAVHA 65
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG +V++TS +GT+R E ++++ K DI +N+QGDEPL+ P+ ++ + + + A +
Sbjct: 66 FGGNVVLTSPDHPSGTDRLVEVMEQV--KADIYINLQGDEPLVRPDDVEQLAQGMLADNN 123
Query: 169 AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQ 228
T ++ E+A +PN VK V+ G A+YFSR IPY + +P F H+G+
Sbjct: 124 VDVGTLYHAIDDEEAQNPNVVKVVLGQKGNALYFSRSPIPYPREVNKHPGFKK--HVGVY 181
Query: 229 SYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESF 288
+Y L+ Y L P+ L+ E LEQL++L G ++ +V GVD PE +EK+
Sbjct: 182 AYRKRILEQYASLPPSALEQTEQLEQLRLLSAGLRISAFEVKPTGPGVDTPECLEKVRDI 241
Query: 289 M 289
+
Sbjct: 242 L 242
>gi|432390949|ref|ZP_19633807.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE21]
gi|430921567|gb|ELC42391.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE21]
Length = 248
Score = 177 bits (448), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 103/246 (41%), Positives = 145/246 (58%), Gaps = 7/246 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPAR+AS+R GKPLV+I GKPMI ER++ + + ++VATD E +A + G
Sbjct: 4 VVIIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGAERIIVATDHEDVARAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D ++VN+QGDEP+I II V L
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS----GKVNPQFPYLLHL 225
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ G +L HL
Sbjct: 123 MATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAKGLETVGDNFLRHL 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI Y + F++ Y P+PL+ E LEQL+VL G K+ V + D GVD PED+E+
Sbjct: 183 GIYGYRAGFIRRYVNWQPSPLEHIEMLEQLRVLWYGEKIHVAVAQDVPGTGVDTPEDLER 242
Query: 285 IESFMR 290
+ + MR
Sbjct: 243 VRAEMR 248
>gi|422970822|ref|ZP_16974334.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
TA124]
gi|371599565|gb|EHN88349.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
TA124]
Length = 248
Score = 177 bits (448), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 103/246 (41%), Positives = 145/246 (58%), Gaps = 7/246 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPAR+AS+R GKPLV+I GKPMI ER++ + D ++VATD E +A + G
Sbjct: 4 VVIIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGADRIIVATDHEDVARAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D ++VN+QGDEP+I II V L
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS----GKVNPQFPYLLHL 225
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ G +L HL
Sbjct: 123 MATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAKGLETVGDNFLRHL 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI Y + F++ Y P+PL+ E LEQL+VL G K+ V + + GVD PED+E+
Sbjct: 183 GIYGYRAGFIRRYVNWQPSPLEHIEMLEQLRVLWYGEKIHVAVAQEVPGTGVDTPEDLER 242
Query: 285 IESFMR 290
+ + MR
Sbjct: 243 VRAEMR 248
>gi|254877161|ref|ZP_05249871.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Francisella
philomiragia subsp. philomiragia ATCC 25015]
gi|254843182|gb|EET21596.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Francisella
philomiragia subsp. philomiragia ATCC 25015]
Length = 250
Score = 177 bits (448), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 103/246 (41%), Positives = 144/246 (58%), Gaps = 13/246 (5%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR S+R GK L +I GKPMIQR +E+ + +++ATD ++I E + FGA
Sbjct: 7 VIPARLKSTRLPGKMLADIAGKPMIQRVYEQVA-KSKFKSIIIATDSQEIKEVAENFGAK 65
Query: 113 VIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
VI+T + +GT+R EA+ KL DIVVN+QGDEPLI E I+ + L P+AV
Sbjct: 66 VILTRDDHESGTDRIAEAVTKLGFADEDIVVNVQGDEPLIPVENIEQAAQLLIEKPEAVV 125
Query: 172 STAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP---YLLHLGI 227
ST + + ED ++PN VK V D + YA+YFSR IP+ + N Q + H+GI
Sbjct: 126 STLCERITEAEDIYNPNNVKVVFDKNNYALYFSRASIPFERGFSENHQVSISEFFRHIGI 185
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAH----GVDAPEDVE 283
+Y FLK Y L +P++ E LEQL+VL NGYK I ++ A GVD +D+E
Sbjct: 186 YTYRVGFLKHYAELAISPIEKYEALEQLRVLYNGYK---IAIEQSAKPTPAGVDTLQDLE 242
Query: 284 KIESFM 289
K+
Sbjct: 243 KVRKLF 248
>gi|338708585|ref|YP_004662786.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Zymomonas
mobilis subsp. pomaceae ATCC 29192]
gi|336295389|gb|AEI38496.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Zymomonas
mobilis subsp. pomaceae ATCC 29192]
Length = 266
Score = 177 bits (448), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 97/260 (37%), Positives = 151/260 (58%), Gaps = 18/260 (6%)
Query: 53 IIPARFASSRFEGKPLVNILG-----KPMIQRTWERSKLATTLDHLVVATDDEKIAECCQ 107
IIPARFAS+R+ GKPLV + G KP+I R+WE + +D +VVATDDE+IAE +
Sbjct: 6 IIPARFASTRYPGKPLVPLTGIEGEQKPLIIRSWEAACSVEGVDRVVVATDDERIAEVVR 65
Query: 108 QFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
+ G + +MT SCRNGTERC AL +L +D+++N QGD PL I++ +++ ++++P
Sbjct: 66 KAGGEALMTPSSCRNGTERCAAALDQLGDDFDLIINFQGDAPLTPAFIVEKLIQIMKSSP 125
Query: 168 DAVFSTAVTSLKPE---DAFDPNR------VKCVVDNHGYAIYFSRGLIPY-NKSGKVNP 217
+ +T + P FD + V + G A+YFS+ +IP+ +K+ + +P
Sbjct: 126 EYGIATPAVTTSPAVRFQLFDDQQHGLVGGTTVVCNAKGEALYFSKSVIPHLSKTNRTDP 185
Query: 218 QFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI---KVDHEAH 274
P LH+G+ +Y L+ Y P+ L+L E LEQL+ L+ G +KV K D E
Sbjct: 186 VLPIYLHIGLYAYRPQALRSYASWQPSSLELIEGLEQLRFLDAGVAVKVSVINKPDLELW 245
Query: 275 GVDAPEDVEKIESFMRERNL 294
++ P D IE+ + R +
Sbjct: 246 ELNNPVDRNLIEATLMARGI 265
>gi|430806826|ref|ZP_19433941.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Cupriavidus sp.
HMR-1]
gi|429500890|gb|EKZ99243.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Cupriavidus sp.
HMR-1]
Length = 269
Score = 177 bits (448), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 100/252 (39%), Positives = 145/252 (57%), Gaps = 17/252 (6%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR AS+R KPL +I G PMI R ER+ A++ VVATD +++A+ C G +
Sbjct: 9 VIPARLASTRLPNKPLADIGGHPMIVRVAERAH-ASSAQRTVVATDSQEVAQACAAHGVE 67
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
++T ++GT+R +E +L D IVVN+QGDEPLIEP +ID V L A PD
Sbjct: 68 AVLTRADHQSGTDRLSEVAAQLGLADDAIVVNVQGDEPLIEPTLIDEVALHLAAHPDCAI 127
Query: 172 STAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK------------SGKVN-P 217
+TA L + F+PN VK V DN G A+YFSR IP+ + + +V P
Sbjct: 128 ATAAHPLDDVAEVFNPNVVKVVCDNAGRALYFSRAPIPWARDAWSAVPAQPAATAQVPLP 187
Query: 218 QFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGV 276
P L H+GI +Y + FL+ +P L P++ E LEQL+ + +G ++ V + A GV
Sbjct: 188 AMPVLRHIGIYAYRAGFLRRFPTLAVAPVEQTEALEQLRAMWHGERIGVMVTAAAPAPGV 247
Query: 277 DAPEDVEKIESF 288
D P D+E++ +
Sbjct: 248 DTPADLERVRAL 259
>gi|170720699|ref|YP_001748387.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas putida
W619]
gi|229830643|sp|B1J508.1|KDSB_PSEPW RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|169758702|gb|ACA72018.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas
putida W619]
Length = 254
Score = 177 bits (448), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 100/246 (40%), Positives = 142/246 (57%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR S+R GKPL+ I GKPM+Q WE+++ + +V+ATDD I E CQ FGA+
Sbjct: 8 VIPARLRSTRLPGKPLLLIAGKPMVQHVWEQAR-KSGAGRVVIATDDASIVEACQAFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V+MT +GT+R E +L D IVVN+QGDEPLI P IID V L A P+A
Sbjct: 67 VLMTRADHESGTDRLAEVAAQLGLPADAIVVNVQGDEPLIPPVIIDQVAANLAAHPEAGI 126
Query: 172 STAVTSLK-PEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVN-----PQ-FPYLLH 224
+T + PE F+PN VK V D +G A+ FSR +P+ + PQ PY H
Sbjct: 127 ATLAEPIHDPETVFNPNAVKVVSDKNGLALSFSRAPLPWARDAFAKDRNQLPQGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDAPEDVE 283
+G+ +Y FL+ + P L+ E LEQL+ L +G ++ V ++ A GVD +D+E
Sbjct: 187 IGMYAYRVGFLQDFVSWGPCWLEQTEALEQLRALWHGVRIHVADAIEAPAVGVDTAQDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|359786672|ref|ZP_09289790.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Halomonas sp.
GFAJ-1]
gi|359296016|gb|EHK60271.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Halomonas sp.
GFAJ-1]
Length = 428
Score = 177 bits (448), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 90/242 (37%), Positives = 146/242 (60%), Gaps = 4/242 (1%)
Query: 48 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQ 107
+RV +IPARF SSR GKPL ++LGKPM+Q +E+++ + +VVATDD++I +
Sbjct: 5 NRVALVIPARFGSSRLPGKPLADLLGKPMVQWVFEKAQQVPSAHTVVVATDDQRIVDAVN 64
Query: 108 QFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
FG V++TS+ +GT+R E + +++ DI +N+QGDEPL+ P ++ + + + P
Sbjct: 65 AFGGKVVLTSKDHPSGTDRLVEVMGQVDA--DIYINLQGDEPLVRPSDVEQLAQGMLVDP 122
Query: 168 DAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
T +++ E+A +PN VK V+ G A+YFSR IPY + G +P F H+G+
Sbjct: 123 TVDVGTLYHAIEDEEAQNPNAVKVVLGQAGNALYFSRSPIPYPREGDKHPGFKK--HVGV 180
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
+Y L+ Y L + L+ E LEQL++L G +++ +V GVD PE +EK+ +
Sbjct: 181 YAYRKRILEQYAQLPASALEQTEQLEQLRLLAAGLRIRAFEVAPTGPGVDTPECLEKVRA 240
Query: 288 FM 289
+
Sbjct: 241 IL 242
>gi|398906835|ref|ZP_10653643.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas sp.
GM50]
gi|398172458|gb|EJM60322.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas sp.
GM50]
Length = 254
Score = 177 bits (448), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 102/246 (41%), Positives = 147/246 (59%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IP+R+AS+R GKPL+ I GKPMIQ WE++ ++ +VVATDD +I E C+ FGA+
Sbjct: 8 VIPSRYASTRLPGKPLLLIAGKPMIQHVWEQAS-KSSAQRVVVATDDARIIEACKSFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V++T E +GT+R E KL D IVVN+QGDEPLI P +ID V L A +A
Sbjct: 67 VVLTREDHNSGTDRLAEVAAKLGLAPDAIVVNVQGDEPLIPPSVIDQVAANLAAHTEARM 126
Query: 172 STAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPY-----NKSGKVNPQ-FPYLLH 224
+T ++ E F+PN VK V D +G A+ FSR +P+ KS + P+ PY H
Sbjct: 127 ATLAEPIEDVETLFNPNVVKVVSDLNGLALTFSRATLPWARDAFAKSREQLPEGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDAPEDVE 283
+GI +Y + FL+ + P L+ E LEQL+ L +G ++ V + GVD PED+E
Sbjct: 187 IGIYAYRAGFLQDFVTWGPCWLENTESLEQLRALWHGVRIHVADALIAPPTGVDTPEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|410092616|ref|ZP_11289138.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
viridiflava UASWS0038]
gi|409760045|gb|EKN45213.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
viridiflava UASWS0038]
Length = 254
Score = 176 bits (447), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 100/246 (40%), Positives = 144/246 (58%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ SSRF GKPL I GKPM+Q WE+++ ++ +VVATDD +I E CQ FGA+
Sbjct: 8 VIPARYGSSRFPGKPLKVIAGKPMVQLVWEQAR-KSSAQRVVVATDDVRIFEACQAFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V+MT + +GT+R E +L D IVVN+QGDEP+I P +ID V L A P+A
Sbjct: 67 VLMTRDDHNSGTDRLAEVATQLGLAADAIVVNVQGDEPMIPPAVIDQVASNLAAHPEAGI 126
Query: 172 STAVTSLKPEDA-FDPNRVKCVVDNHGYAIYFSRGLIPYNKSG------KVNPQFPYLLH 224
ST + A F+PN VK D +G A+ FSR +P+ + ++ P H
Sbjct: 127 STLAEPIDDVAALFNPNVVKVSSDINGLALTFSRAPLPWARDALAANRDELPAGVPLRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDAPEDVE 283
+GI +Y + FL + P L+ E+LEQL+ L NG ++ V ++ GVD PED+E
Sbjct: 187 IGIYAYRAGFLHDFVSWGPCMLENTENLEQLRALWNGVRIHVADALEAPPAGVDTPEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|167628088|ref|YP_001678588.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Francisella
philomiragia subsp. philomiragia ATCC 25017]
gi|226724289|sp|B0U168.1|KDSB_FRAP2 RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|167598089|gb|ABZ88087.1| 3-deoxy-D-manno-octulosonate cytidyltransferase [Francisella
philomiragia subsp. philomiragia ATCC 25017]
Length = 250
Score = 176 bits (447), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 103/246 (41%), Positives = 144/246 (58%), Gaps = 13/246 (5%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR S+R GK L +I GKPMIQR +E+ + +++ATD ++I E + FGA
Sbjct: 7 VIPARLKSTRLPGKMLADIAGKPMIQRVYEQVA-KSKFKSIIIATDSQEIKEVAENFGAK 65
Query: 113 VIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
VI+T + +GT+R EA+ KL DIVVN+QGDEPLI E I+ + L P+AV
Sbjct: 66 VILTRDDHESGTDRIAEAVTKLGFADEDIVVNVQGDEPLIPVENIEQAAQLLIEKPEAVV 125
Query: 172 STAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP---YLLHLGI 227
ST + + ED ++PN VK V D + YA+YFSR IP+ + N Q + H+GI
Sbjct: 126 STLCERITEAEDIYNPNNVKVVFDKNNYALYFSRASIPFERGFSENHQVSISEFFRHIGI 185
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAH----GVDAPEDVE 283
+Y FLK Y L +P++ E LEQL+VL NGYK I ++ A GVD +D+E
Sbjct: 186 YTYRVGFLKHYAELAISPIEKYEALEQLRVLYNGYK---IAIEQSAKPTPAGVDTLQDLE 242
Query: 284 KIESFM 289
K+
Sbjct: 243 KVRKLF 248
>gi|392545536|ref|ZP_10292673.1| CTP:CMP-3-deoxy-D-manno-octulosonate transferase [Pseudoalteromonas
rubra ATCC 29570]
Length = 254
Score = 176 bits (447), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 99/248 (39%), Positives = 151/248 (60%), Gaps = 14/248 (5%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+AS+R GKPL +I GKPMIQ +E+++ + + +ATD+ ++ E Q F +
Sbjct: 6 VIPARYASTRLPGKPLADICGKPMIQHVYEQAQ-KSGAKAVYIATDNAQVCERAQAFTEN 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKAL---QAAPD 168
V+MT E ++GTER E +++L D +VVN+QGDEPL+ PE I V L Q AP
Sbjct: 65 VLMTREDHQSGTERLAEVVEQLGLADDTLVVNVQGDEPLLAPENITQVATLLHEAQEAPM 124
Query: 169 AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVN------PQFPYL 222
A S VT + ++ +PN VK V D H A+YFSR IP+ + + P +
Sbjct: 125 ATLSVDVTDV--QEVLNPNAVKVVQDAHHNALYFSRASIPFQRDSMMTLDESKVPLAHFQ 182
Query: 223 LHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAH-GVDAPED 281
H+GI +Y + F+K Y L +PL+ +E LEQL+VL +GY++K+ K + GVD PED
Sbjct: 183 RHVGIYAYRAGFIKTYLALPVSPLEGQESLEQLRVLYHGYRIKIAKACRPVYAGVDTPED 242
Query: 282 VEKIESFM 289
++++ ++
Sbjct: 243 LKRVVEYL 250
>gi|226943596|ref|YP_002798669.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Azotobacter
vinelandii DJ]
gi|226718523|gb|ACO77694.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Azotobacter
vinelandii DJ]
Length = 254
Score = 176 bits (447), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 97/246 (39%), Positives = 142/246 (57%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ASSR GKPL +I GKPMIQ WE+++ + +VVATDD +I CQ FGA+
Sbjct: 8 VIPARYASSRLPGKPLQDIAGKPMIQHVWEQARRSGA-QRVVVATDDARIEAACQSFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
++T +GT+R E +L D +VVN+QGDEPLI P +ID V + L A P+A
Sbjct: 67 ALLTRVEHNSGTDRLAEVAGRLSLADDAVVVNVQGDEPLIPPALIDQVAENLAAHPEAAI 126
Query: 172 STAVTSLKPEDA-FDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ------FPYLLH 224
+T + +A F+PN VK D HG A+ FSR +P+ + + PY H
Sbjct: 127 ATLAEPIDSAEALFNPNVVKVASDIHGLALTFSRAPLPWARDAFAGSRECLPAGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDAPEDVE 283
+GI +Y + FL+ + P L+ E LEQL+ L +G ++ V ++ GVD ED+E
Sbjct: 187 IGIYAYRAGFLRDFVAWGPCWLESVESLEQLRALWHGARIHVADALEAPQAGVDTQEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|226192872|ref|ZP_03788485.1| conserved hypothetical protein [Burkholderia pseudomallei Pakistan
9]
gi|225935122|gb|EEH31096.1| conserved hypothetical protein [Burkholderia pseudomallei Pakistan
9]
Length = 390
Score = 176 bits (447), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 96/276 (34%), Positives = 154/276 (55%), Gaps = 21/276 (7%)
Query: 37 RAYLGRSKNFRSR-------VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATT 89
RA+ S R+R V ++PAR AS+R KPL ++ GKPM+ R ER++ A
Sbjct: 114 RAHFSNSFALRARPMTSPLPFVAVVPARLASTRLPNKPLADLGGKPMVVRVAERAREAGA 173
Query: 90 LDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDE 148
++VA+D +++ + ++ G D ++T +GT+R E KL D IVVN+QGDE
Sbjct: 174 -QQVLVASDAQRVLDAVREHGFDAVLTRADHPSGTDRLAEVAAKLGFDDDTIVVNVQGDE 232
Query: 149 PLIEPEIIDGVVKALQAAPDAVFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLI 207
PLI+P+++ V L A P +TA + + + F+PN VK V+D HG A+YFSR I
Sbjct: 233 PLIDPQLVRDVASHLAAHPSCAIATAAHPIHEAHEVFNPNYVKVVLDAHGVALYFSRAPI 292
Query: 208 PYNKSGKV----------NPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKV 257
P+++ + P P H+G+ +Y + FL+ YP L P++ E LEQL+
Sbjct: 293 PWSRDAYLPHWPNVAAMPAPTCPVYRHIGLYAYRARFLRTYPTLAQAPIEAAEQLEQLRA 352
Query: 258 LENGYKMKVIKVDHEAH-GVDAPEDVEKIESFMRER 292
+ +G ++ V +H G+D P D+E++++ R R
Sbjct: 353 MWHGERIAVRVTEHAPEAGIDTPADLERVQALFRSR 388
>gi|428945538|ref|ZP_19018150.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
88.1467]
gi|427215529|gb|EKV84708.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
88.1467]
Length = 245
Score = 176 bits (447), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 104/245 (42%), Positives = 145/245 (59%), Gaps = 9/245 (3%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR+AS+R GKPLV+I GKPMI ER++ + + ++VATD E +A + G +
Sbjct: 3 IIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGAERIIVATDHEDVARAVEAAGGE 61
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MT ++GTER E ++K D ++VN+QGDEP+I II V L +
Sbjct: 62 VCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVGMA 121
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS----GKVNPQFPYLLHLGI 227
+ AV E+AF+PN VK V+D GYA+YFSR IP+++ G +L HLGI
Sbjct: 122 TLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAKGLETVGDNFLRHLGI 181
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHE--AHGVDAPEDVEKI 285
Y + F++ Y P+PL+ E LEQL+VL G K+ V V HE GVD PED+E++
Sbjct: 182 YGYRAGFIRRYVTWQPSPLEHIEMLEQLRVLWYGEKIHV-AVAHEVPGTGVDTPEDLERV 240
Query: 286 ESFMR 290
+ MR
Sbjct: 241 RAEMR 245
>gi|343510213|ref|ZP_08747465.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio scophthalmi
LMG 19158]
gi|342802926|gb|EGU38312.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio scophthalmi
LMG 19158]
Length = 249
Score = 176 bits (447), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 98/245 (40%), Positives = 144/245 (58%), Gaps = 6/245 (2%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ S+R GKPL +I GKPM+Q +E++ A D +++ATDDE++ + + FGA
Sbjct: 6 VIPARYQSTRLPGKPLADIGGKPMVQWVYEQAVQAGA-DQVIIATDDERVEQAAKAFGAQ 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS + +GTER E ++ + D I+VN+QGDEPLI P II V L + +
Sbjct: 65 VCMTSPNHESGTERLAEVVKLMGIADDHIIVNVQGDEPLIPPSIITQVADNLANSQAPMS 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF---PYLLHLGIQ 228
+ AV + F+PN VK + D GYA+YFSR IP+++ N P L H+GI
Sbjct: 125 TLAVEISDEAEVFNPNAVKVLTDKDGYAMYFSRATIPWDRDNFANNNTIAQPLLRHIGIY 184
Query: 229 SYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKIES 287
+Y + F+ Y P+ L+ E LEQL+VL G K+ V + + A GVD PED++ +
Sbjct: 185 AYRAGFINTYINWQPSVLEKIECLEQLRVLWYGEKIHVAVAKEAPAAGVDTPEDLQAVRD 244
Query: 288 FMRER 292
+ R
Sbjct: 245 IIANR 249
>gi|417267677|ref|ZP_12055038.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
3.3884]
gi|386230035|gb|EII57390.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
3.3884]
Length = 248
Score = 176 bits (447), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 103/246 (41%), Positives = 145/246 (58%), Gaps = 7/246 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPAR+AS+R GKPLV+I GKPMI ER++ + D ++VATD E +A + G
Sbjct: 4 VVIIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGADRIIVATDHEDVARAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D ++VN+QGDEP+I II V L
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS----GKVNPQFPYLLHL 225
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ G +L HL
Sbjct: 123 MATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAEGLETVGDNFLRHL 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI Y + F++ Y P+PL+ E LEQL+VL G K+ V + + GVD PED+E+
Sbjct: 183 GIYGYRAGFIRRYINWQPSPLEHIEMLEQLRVLWYGEKIHVAVAQEVPGTGVDTPEDLER 242
Query: 285 IESFMR 290
+ + MR
Sbjct: 243 VRAEMR 248
>gi|300921044|ref|ZP_07137431.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 115-1]
gi|432533145|ref|ZP_19770136.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE234]
gi|300412035|gb|EFJ95345.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 115-1]
gi|431062866|gb|ELD72126.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE234]
Length = 248
Score = 176 bits (447), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 105/247 (42%), Positives = 145/247 (58%), Gaps = 9/247 (3%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPAR+AS+R GKPLV+I GKPMI ER++ + D ++VATD E +A + G
Sbjct: 4 VVIIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGADRIIVATDHEDVARAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D ++VN+QGDEP+I II V L
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS----GKVNPQFPYLLHL 225
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ G +L HL
Sbjct: 123 MATLAVPIRNAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAEGLETVGDNFLRHL 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHE--AHGVDAPEDVE 283
GI Y + F++ Y +PL+ E LEQL+VL G K+ V V HE GVD PED+E
Sbjct: 183 GIYGYRAGFIRRYVNWQASPLEHIEMLEQLRVLWYGEKIHV-AVAHEVPGTGVDTPEDLE 241
Query: 284 KIESFMR 290
++ + MR
Sbjct: 242 RVRAEMR 248
>gi|432860718|ref|ZP_20085802.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE146]
gi|431406727|gb|ELG89946.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE146]
Length = 248
Score = 176 bits (447), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 103/246 (41%), Positives = 145/246 (58%), Gaps = 7/246 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPAR+AS+R GKPLV+I GKPMI ER++ + D ++VATD E +A + G
Sbjct: 4 VVIIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGADRIIVATDHEDVARAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D ++VN+QGDEP+I II V L
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS----GKVNPQFPYLLHL 225
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ G +L HL
Sbjct: 123 MATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAKGLETVGDNFLRHL 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI Y + F++ Y P+PL+ E LEQL+VL G K+ V + + GVD PED+E+
Sbjct: 183 GIYGYRAGFIRRYVTWQPSPLEHIEMLEQLRVLWYGEKIHVAVAQEVPGTGVDTPEDLER 242
Query: 285 IESFMR 290
+ + MR
Sbjct: 243 VRAEMR 248
>gi|422780083|ref|ZP_16832868.1| cytidylyltransferase [Escherichia coli TW10509]
gi|323978980|gb|EGB74060.1| cytidylyltransferase [Escherichia coli TW10509]
Length = 246
Score = 176 bits (447), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 91/242 (37%), Positives = 146/242 (60%), Gaps = 5/242 (2%)
Query: 48 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQ 107
S+ V +IPAR+ SSR GKPL++I+GKPMIQ +ER+ L + + VATDD+++ + Q
Sbjct: 2 SKAVIVIPARYGSSRLPGKPLLDIVGKPMIQHVYERALLVAGVAEVWVATDDQRVEKAVQ 61
Query: 108 QFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
FG IMT +GT+R E + K+E DI +N+QGDEP+I P ++ +++ ++ P
Sbjct: 62 AFGGKAIMTRNDHESGTDRLVEVMHKVEA--DIYINLQGDEPMIRPRDVETLLQGMRDDP 119
Query: 168 DAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+T ++ E+A +P+ VK VV+ A+YFSR IPY ++ + + YL H+GI
Sbjct: 120 ALPVATLCHAISAEEAAEPSTVKVVVNTRQDALYFSRSPIPYPRNAE---KARYLKHVGI 176
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
+Y + L+ Y L + L+ E LEQL+++ G ++ +V GVD P +EK+ +
Sbjct: 177 YAYRRDVLQNYSQLPESMLEQAESLEQLRLMSAGINIRTFEVAATGPGVDTPACLEKVRA 236
Query: 288 FM 289
M
Sbjct: 237 LM 238
>gi|330502584|ref|YP_004379453.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
mendocina NK-01]
gi|328916870|gb|AEB57701.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
mendocina NK-01]
Length = 254
Score = 176 bits (447), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 102/246 (41%), Positives = 146/246 (59%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+AS+R GKPL +I GKPM+Q WE++K ++ +V+ATDD +I + CQ FGA+
Sbjct: 8 VIPARYASTRLPGKPLQDIAGKPMVQHVWEQAK-KSSASRVVIATDDARIVDACQAFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V++T E +GT+R E +L + IVVN+QGDEPLI P IID V L A P A
Sbjct: 67 VLLTREDHNSGTDRLAEVASQLGLPAEAIVVNVQGDEPLIPPAIIDQVAANLAANPQAGI 126
Query: 172 STAVTSLKPEDA-FDPNRVKCVVDNHGYAIYFSRGLI-----PYNKSGKVNPQ-FPYLLH 224
+T ++ A F+PN VK V D +G A+ FSR + + K+ V PQ PY H
Sbjct: 127 ATLAEPIEDVTALFNPNVVKVVADKNGLALTFSRAPLAWARDAFAKNRDVLPQGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDAPEDVE 283
+GI +Y + FL + L+ E LEQL+ L NG ++ V ++ A GVD ED+E
Sbjct: 187 IGIYAYRAGFLHDFVAWGACWLEDTECLEQLRALYNGVRIHVADALEAPAAGVDTAEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|398881190|ref|ZP_10636201.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas sp.
GM67]
gi|398190385|gb|EJM77614.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas sp.
GM67]
Length = 254
Score = 176 bits (447), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 103/246 (41%), Positives = 145/246 (58%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IP+R+AS+R GKPL+ I GKPMIQ WE++ ++ + +VVATDD +I E C FGAD
Sbjct: 8 VIPSRYASTRLPGKPLLLIAGKPMIQHVWEQA-CKSSAERVVVATDDARIVEACIAFGAD 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V++T E +GT+R E KL D IVVN+QGDEPLI P +ID V L A +A
Sbjct: 67 VVLTREDHNSGTDRLAEVAAKLGLASDAIVVNVQGDEPLIPPSVIDQVAANLAAHTEARM 126
Query: 172 STAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPY-----NKSGKVNPQ-FPYLLH 224
+T ++ E F+PN VK V D +G A+ FSR +P+ KS V P+ PY H
Sbjct: 127 ATLAEPIEDVETLFNPNVVKVVSDLNGLALTFSRATLPWARDAFAKSRDVLPEGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDAPEDVE 283
+GI +Y + FL + P L+ E LEQL+ L +G ++ V + GVD ED+E
Sbjct: 187 IGIYAYRAGFLHDFVSWGPCWLENTESLEQLRALWHGVRIHVADALIAPPTGVDTAEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|77460394|ref|YP_349901.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
fluorescens Pf0-1]
gi|123603672|sp|Q3K8J4.1|KDSB_PSEPF RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|77384397|gb|ABA75910.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
fluorescens Pf0-1]
Length = 254
Score = 176 bits (447), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 101/246 (41%), Positives = 147/246 (59%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IP+R+AS+R GKPL++I GKPMIQ WE++ ++ +VVATDD +I E C+ FGA+
Sbjct: 8 VIPSRYASTRLPGKPLLDIAGKPMIQHVWEQAS-KSSASRVVVATDDARIVEACKAFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V++T E +GT+R E KL + D IVVN+QGDEPLI P +ID V L A +A
Sbjct: 67 VVLTREDHNSGTDRLAEVAAKLGLEPDAIVVNVQGDEPLIPPSVIDQVAANLAAHTEARM 126
Query: 172 STAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIP-----YNKSGKVNPQ-FPYLLH 224
+T ++ E F+PN VK V D +G A+ FSR +P + K V P+ PY H
Sbjct: 127 ATLAEPIEDVETLFNPNVVKVVSDLNGLALTFSRATLPLARDAFAKRRDVLPEGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDAPEDVE 283
+GI +Y + FL+ + P L+ E LEQL+ L +G ++ V + GVD ED+E
Sbjct: 187 IGIYAYRAGFLQDFVSWGPCWLENTESLEQLRALWHGVRIHVADALIAPPTGVDTAEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|423202035|ref|ZP_17188614.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Aeromonas veronii
AER39]
gi|404615646|gb|EKB12608.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Aeromonas veronii
AER39]
Length = 249
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/245 (41%), Positives = 146/245 (59%), Gaps = 7/245 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V +IPAR+AS+R GKPL +I GKPM+Q E++ L + D ++VATDDE++ + Q G
Sbjct: 4 VVVIPARYASTRLPGKPLADIHGKPMVQHVVEKA-LQSGADRVIVATDDERVQQALQSTG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MTS ++GTER E + D I+VN+QGDEPLI P II V L AA
Sbjct: 63 VEVCMTSPDHQSGTERLAEVCRHYGFAADTIIVNVQGDEPLIPPAIIRQVADNLAAATAP 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP----YLLHL 225
+ + +V E+AF+PN VK V D GYA+YFSR IP+++ N Y H+
Sbjct: 123 MATLSVPIQDAEEAFNPNAVKVVTDKDGYALYFSRASIPWDRDRFANSHEQIGDHYQRHI 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIK-VDHEAHGVDAPEDVEK 284
GI +Y + F++ Y P+ L+ E LEQL+VL G K+ V + ++ GVD D+EK
Sbjct: 183 GIYAYRAGFIQRYVDWAPSVLEQVEALEQLRVLWYGEKIHVAQALEAPPVGVDTQADLEK 242
Query: 285 IESFM 289
+ +F+
Sbjct: 243 VRAFL 247
>gi|424924329|ref|ZP_18347690.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas
fluorescens R124]
gi|404305489|gb|EJZ59451.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas
fluorescens R124]
Length = 254
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 98/246 (39%), Positives = 146/246 (59%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IP+R+AS+R GKPL++I GKPMIQ WE++ ++ +VVATDD +I E C+ FGA+
Sbjct: 8 VIPSRYASTRLPGKPLLDIAGKPMIQHVWEQAS-KSSASRVVVATDDARIVEACKAFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V++T E +GT+R E KL + D IVVN+QGDEPLI P +ID V L A +A
Sbjct: 67 VVLTREDHNSGTDRLAEVAAKLGLEPDAIVVNVQGDEPLIPPSVIDQVAANLAAHTEARM 126
Query: 172 STAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSG------KVNPQFPYLLH 224
+T ++ E F+PN VK V D +G A+ FSR +P+ + ++ PY H
Sbjct: 127 ATLAEPIEDVETLFNPNVVKVVSDLNGLALTFSRATLPWARDAFAKNREQLPEGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDAPEDVE 283
+GI +Y + FL+ + P L+ E LEQL+ L +G ++ V + GVD ED+E
Sbjct: 187 IGIYAYRAGFLQDFVSWGPCWLENTESLEQLRALWHGVRIHVADALIAPPTGVDTAEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|410643457|ref|ZP_11353953.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Glaciecola
chathamensis S18K6]
gi|410136867|dbj|GAC12140.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Glaciecola
chathamensis S18K6]
Length = 253
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/242 (42%), Positives = 147/242 (60%), Gaps = 10/242 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR+ASSRF GKPLV I GKPM+Q ++R+ + + +++VATDD +IA+ FG
Sbjct: 6 IIPARYASSRFPGKPLVEINGKPMVQHVYQRA-IESGASNVIVATDDARIAKVVSDFGGR 64
Query: 113 VIMTSESCRNGTERCNEALQKLEK-KYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
MT +GTER E ++ + +IVVN+QGDEP I E I V + L A
Sbjct: 65 YCMTGAHHESGTERLAEVVEMQDMLAQEIVVNVQGDEPFIPAENIQQVAENLHHHQQAEM 124
Query: 172 ST-AVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF------PYLLH 224
+T AV + E+AF+PN VK V+D GYA+YF+R IPY+++ ++ YL H
Sbjct: 125 ATLAVKIVDVEEAFNPNAVKVVLDKQGYAMYFTRATIPYDRARFLDEDIIDEIGDYYLRH 184
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVE 283
+GI +Y + F+K Y + P+ L+ E LEQL+VL +G K+ V I G+D PED++
Sbjct: 185 VGIYAYRAGFIKQYVNMSPSGLEQIESLEQLRVLWHGEKIHVDIARKTPPAGIDTPEDLK 244
Query: 284 KI 285
+I
Sbjct: 245 RI 246
>gi|398847233|ref|ZP_10604162.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas sp.
GM84]
gi|398251787|gb|EJN37015.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas sp.
GM84]
Length = 254
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 98/246 (39%), Positives = 140/246 (56%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR S+R GKPL I GKPM+Q WE+++ + +V+ATDD I E CQ FG +
Sbjct: 8 VIPARLRSTRLPGKPLQLIAGKPMVQHVWEQAR-KSGASRVVIATDDASIVEACQAFGGE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V+MT +GT+R E L D IVVN+QGDEPLI P IID V L A P+A
Sbjct: 67 VLMTRADHESGTDRLAEVAAHLGLPADAIVVNVQGDEPLIPPVIIDQVAANLAAHPEAGI 126
Query: 172 STAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSG------KVNPQFPYLLH 224
+T + +PE F+PN VK + D G A+ FSR +P+ + ++ PY H
Sbjct: 127 ATLAEPIHEPETVFNPNAVKVISDKQGLALSFSRAPLPWARDAFAKDRSQLPEGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVE 283
+G+ +Y FL+ + P L+ E LEQL+ L +G ++ V ++ A GVD PED+E
Sbjct: 187 IGMYAYRVGFLQDFVSWGPCWLEQTEALEQLRALWHGVRIHVEDAIEAPAVGVDTPEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|375260000|ref|YP_005019170.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella oxytoca
KCTC 1686]
gi|365909478|gb|AEX04931.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella oxytoca
KCTC 1686]
Length = 248
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/246 (41%), Positives = 147/246 (59%), Gaps = 7/246 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPARFAS+R GKPL +I GKPMI ER++ + + ++VATD +A + G
Sbjct: 4 VVIIPARFASTRLPGKPLQDINGKPMIVHVLERAR-ESGAERIIVATDHPDVARAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT E ++GTER E ++K D I+VNIQGDEP+I P I+ V + L A+
Sbjct: 63 GEVCMTREDHQSGTERLAEVVEKCAFSDDTIIVNIQGDEPMIPPAIVRQVAENLAASTSG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS----GKVNPQFPYLLHL 225
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ + + L H+
Sbjct: 123 MATLAVPIHDAEEAFNPNAVKVVMDAEGYALYFSRATIPWDRDRFAKSRESIGDSLLRHI 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVD-HEAHGVDAPEDVEK 284
GI Y + F++ Y P+PL+ E LEQL+VL G K+ V + GVD PED+E+
Sbjct: 183 GIYGYRAGFIRRYVSWAPSPLEQIEMLEQLRVLWYGEKIHVAVAEVVPGTGVDTPEDLER 242
Query: 285 IESFMR 290
+ + +R
Sbjct: 243 VRAELR 248
>gi|261880494|ref|ZP_06006921.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Prevotella
bergensis DSM 17361]
gi|270332833|gb|EFA43619.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Prevotella
bergensis DSM 17361]
Length = 250
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 95/245 (38%), Positives = 147/245 (60%), Gaps = 9/245 (3%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
+ IIPAR++S+RF GKPL + KP+IQ +E K++ + VATDDE+I ++FG
Sbjct: 4 IAIIPARYSSTRFPGKPLALLAAKPVIQHVYE--KVSQIISETWVATDDERIFNKVKEFG 61
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAV 170
+MT + ++GT+R EA+ ++ +I++NIQGDEP ++ I+ + K + PD
Sbjct: 62 GKAVMTRANHQSGTDRIQEAVSHIKTDAEIIINIQGDEPFVQHSQINTLCKLFED-PDTQ 120
Query: 171 FSTAVTSLKPEDAFD-PNRVKCVVDNHGYAIYFSRGLIPY----NKSGKVNPQFPYLLHL 225
T +A + PN K ++DNH +A+YFSR IP+ K +N FP+L H+
Sbjct: 121 IGTIGKVFSDIEAVENPNSPKVIIDNHQFAMYFSRSPIPFIRGVEKKEWIN-HFPFLKHI 179
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKI 285
GI +Y N L+ L + L++ E LEQL+ L+NGYK+KV D E G+D P ++EK
Sbjct: 180 GIYAYRKNVLEKITQLPQSSLEIAESLEQLRWLQNGYKIKVGFTDVETIGIDTPAELEKA 239
Query: 286 ESFMR 290
E ++R
Sbjct: 240 EQYLR 244
>gi|149174743|ref|ZP_01853368.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Planctomyces maris
DSM 8797]
gi|148846437|gb|EDL60775.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Planctomyces maris
DSM 8797]
Length = 250
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 104/239 (43%), Positives = 138/239 (57%), Gaps = 10/239 (4%)
Query: 50 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQF 109
V G+IPAR S+R GK L+N GK +IQ TWE + + LD L+VATD +I EC F
Sbjct: 3 VCGVIPARLHSTRLPGKLLLNETGKSLIQHTWEAAAGSERLDRLIVATDSLEILECVHGF 62
Query: 110 GADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
G +T E NGT+R E ++ DI+VNIQGDEP I P ID +V L +P A
Sbjct: 63 GGKACLTGEH-PNGTDRIAEVAKQELFDADILVNIQGDEPEISPVFIDQLVDVLIQSPTA 121
Query: 170 VFSTAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF------PYL 222
+T T ++ E DP+ K V G A+YFSR IPY + +P+F P+L
Sbjct: 122 DMATLATPIRELEQLQDPSCTKVVCRTDGSAMYFSRLPIPYTRDQ--SPEFLLPDQSPWL 179
Query: 223 LHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPED 281
LHLGI +Y FL + PTPL+ E LEQL+ LE+G ++V +V H + G+D PED
Sbjct: 180 LHLGIYAYRRPFLLNLTQIPPTPLEQLEKLEQLRALESGATIQVAQVTHPSVGIDTPED 238
>gi|167718404|ref|ZP_02401640.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Burkholderia
pseudomallei DM98]
gi|167737452|ref|ZP_02410226.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Burkholderia
pseudomallei 14]
gi|167844604|ref|ZP_02470112.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Burkholderia
pseudomallei B7210]
gi|167893137|ref|ZP_02480539.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Burkholderia
pseudomallei 7894]
gi|167917860|ref|ZP_02504951.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Burkholderia
pseudomallei BCC215]
gi|254196966|ref|ZP_04903390.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Burkholderia
pseudomallei S13]
gi|403517580|ref|YP_006651713.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Burkholderia
pseudomallei BPC006]
gi|169653709|gb|EDS86402.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Burkholderia
pseudomallei S13]
gi|403073223|gb|AFR14803.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Burkholderia
pseudomallei BPC006]
Length = 263
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 91/255 (35%), Positives = 147/255 (57%), Gaps = 14/255 (5%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V ++PAR AS+R KPL ++ GKPM+ R ER++ A ++VA+D +++ + ++ G
Sbjct: 8 VAVVPARLASTRLPNKPLADLGGKPMVVRVAERAREAGA-QQVLVASDAQRVLDAVREHG 66
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
D ++T +GT+R E KL D IVVN+QGDEPLI+P+++ V L A P
Sbjct: 67 FDAVLTRADHPSGTDRLAEVAAKLGFDDDTIVVNVQGDEPLIDPQLVRDVASHLAAHPSC 126
Query: 170 VFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKV----------NPQ 218
+TA + + + F+PN VK V+D HG A+YFSR IP+++ + P
Sbjct: 127 AIATAAHPIHEAHEVFNPNYVKVVLDAHGVALYFSRAPIPWSRDAYLPHWPNVAAMPAPT 186
Query: 219 FPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAH-GVD 277
P H+G+ +Y + FL+ YP L P++ E LEQL+ + +G ++ V +H G+D
Sbjct: 187 CPVYRHIGLYAYRARFLRTYPALAQAPIEAAEQLEQLRAMWHGERIAVRVTEHAPEAGID 246
Query: 278 APEDVEKIESFMRER 292
P D+E++++ R R
Sbjct: 247 TPADLERVQALFRSR 261
>gi|260776185|ref|ZP_05885080.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio
coralliilyticus ATCC BAA-450]
gi|260607408|gb|EEX33673.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio
coralliilyticus ATCC BAA-450]
Length = 250
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 103/245 (42%), Positives = 145/245 (59%), Gaps = 11/245 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ S+R GKPL +I GKPMIQ +E+S L + +VVATDD ++ Q FG
Sbjct: 6 VIPARYESTRLPGKPLADIGGKPMIQWVYEQS-LQAGAEKVVVATDDARVESAVQAFGGV 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS +GTER E ++ + D ++VN+QGDEPLI P II V L ++ +
Sbjct: 65 VCMTSSEHESGTERLAEVVKVMNIPDDHVIVNVQGDEPLIPPAIITQVASNLASSQAPMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK-----SGKVNPQFPYLLHLG 226
+ AV ++ F+PN VK + D GYA+YFSR IP+++ GKV Q P + H+G
Sbjct: 125 TLAVEISHEDEVFNPNAVKVLTDKDGYAMYFSRATIPWDRDNFANGGKVIAQ-PLMRHIG 183
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEA--HGVDAPEDVEK 284
I +Y + F+ Y PT L+ E LEQL+VL G K+ V +V +A GVD PED+E
Sbjct: 184 IYAYRAGFINTYINWEPTALEKIESLEQLRVLWYGEKIHV-EVAKQAPPAGVDTPEDLEV 242
Query: 285 IESFM 289
+ +
Sbjct: 243 VRKLI 247
>gi|237747410|ref|ZP_04577890.1| CTP:CMP-3-deoxy-D-manno-octulosonate transferase [Oxalobacter
formigenes HOxBLS]
gi|229378761|gb|EEO28852.1| CTP:CMP-3-deoxy-D-manno-octulosonate transferase [Oxalobacter
formigenes HOxBLS]
Length = 254
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 101/246 (41%), Positives = 149/246 (60%), Gaps = 12/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR AS+R KPL +I GKPMI R ER++ + D +VVATDD+ I + C FG
Sbjct: 6 VIPARLASTRLPEKPLADIQGKPMIVRVAERARRSGARD-VVVATDDQSIVDACAVFGIP 64
Query: 113 VIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
+MT + +GT+R E +K++ +D VVN+QGDEPLI+PE+I A + +
Sbjct: 65 ALMTRKDHPSGTDRIAEVAEKMDWAPFDTVVNVQGDEPLIDPELI--AATASLVSEEVPM 122
Query: 172 STAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSG-----KVNPQ-FPYLLH 224
+TA + +PED F+PN VK V+D G A+YFSR +P+ + G K P+ F L H
Sbjct: 123 ATAAHRMERPEDIFNPNYVKVVLDRLGRALYFSRAPVPWYRDGYARDEKAFPESFMALRH 182
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVE 283
+G+ ++ ++FLK Y L +P++ E LEQL+VL +GY + V I + GVD D+E
Sbjct: 183 VGLYAFRNDFLKTYSSLEVSPIEQVESLEQLRVLWHGYSIAVHITEEIPEAGVDTAADLE 242
Query: 284 KIESFM 289
++ F
Sbjct: 243 RVRHFF 248
>gi|311107326|ref|YP_003980179.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Achromobacter
xylosoxidans A8]
gi|310762015|gb|ADP17464.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Achromobacter
xylosoxidans A8]
Length = 254
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 101/246 (41%), Positives = 144/246 (58%), Gaps = 10/246 (4%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
+ +IPAR AS+R KPL +I GKPM+ RT ER+ L+ + VATDD ++ + Q G
Sbjct: 4 IALIPARTASTRLPDKPLADIAGKPMVVRTAERAALSGAA-RVYVATDDLRVQQAVQAHG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+MT GT+R EA+++L D IVVN+QGDEPLIEPE+ID V LQA+P+A
Sbjct: 63 LQALMTRADHPTGTDRLAEAVEQLGLPDDAIVVNVQGDEPLIEPELIDAVAAKLQASPEA 122
Query: 170 VFSTAVTSLKPEDA-FDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ------FPYL 222
+T L DA F+PN VK V A+YFSR IP+ + + + P
Sbjct: 123 DIATCACPLADADALFNPNVVKLVCAADDRALYFSRAPIPWARDALASGERILAEGLPAW 182
Query: 223 LHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDH-EAHGVDAPED 281
H+G+ +Y +FL+ YP L L+ E LEQL+ +E+G+ + V + H A GVD P D
Sbjct: 183 HHIGLYAYRVSFLRRYPRLPQGALERFESLEQLRAMEHGHVIVVHRASHPPAAGVDTPAD 242
Query: 282 VEKIES 287
+E++ +
Sbjct: 243 LERVRA 248
>gi|421727793|ref|ZP_16166951.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella oxytoca
M5al]
gi|410371276|gb|EKP25999.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella oxytoca
M5al]
Length = 248
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/246 (41%), Positives = 146/246 (59%), Gaps = 7/246 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPARFAS+R GKPL +I GKPMI ER++ + + ++VATD +A + G
Sbjct: 4 VVIIPARFASTRLPGKPLQDINGKPMIVHVLERAR-ESGAERIIVATDHPDVAHAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT E ++GTER E ++K D I+VNIQGDEP+I P I+ V + L A+
Sbjct: 63 GEVCMTREDHQSGTERLAEVVEKCAFSDDTIIVNIQGDEPMIPPAIVRQVAENLAASTSG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP----YLLHL 225
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ + L H+
Sbjct: 123 MATLAVPIHDAEEAFNPNAVKVVMDAEGYALYFSRATIPWDRDRFAKSREAVGDSLLRHI 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVD-HEAHGVDAPEDVEK 284
GI Y + F++ Y P+PL+ E LEQL+VL G K+ V + GVD PED+E+
Sbjct: 183 GIYGYRAGFIRRYVSWAPSPLEQIEMLEQLRVLWYGEKIHVAVAEVVPGTGVDTPEDLER 242
Query: 285 IESFMR 290
+ + +R
Sbjct: 243 VRAELR 248
>gi|218130991|ref|ZP_03459795.1| hypothetical protein BACEGG_02593 [Bacteroides eggerthii DSM 20697]
gi|217986863|gb|EEC53195.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Bacteroides
eggerthii DSM 20697]
Length = 252
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 99/251 (39%), Positives = 147/251 (58%), Gaps = 10/251 (3%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR+AS+RF KPL + GK +IQR +E ++A LD VATDD +I +
Sbjct: 2 KFLGIIPARYASTRFPAKPLALLGGKAVIQRVYE--QVAGVLDDAYVATDDVRIEAAVKA 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG V+MTS ++GT+RC EA K+ +D++VNIQGDEP I+P ++ VKA P
Sbjct: 60 FGGKVVMTSVHHKSGTDRCYEACTKVGDGFDVIVNIQGDEPFIQPSQLE-TVKACFNDPA 118
Query: 169 AVFSTAVTSLKPEDAFDP----NRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP---Y 221
+T V ++ F+ N K V++ + A+YFSR +IPY ++ + Y
Sbjct: 119 TQIATLVKPFTADNGFETLENVNSPKVVLNKNMNALYFSRSIIPYQRNAEKCEWLKNHIY 178
Query: 222 LLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPED 281
H+G+ +Y LK L + L+L E LEQL+ LENGY +K + E G+D P+D
Sbjct: 179 YKHIGLYAYRLEVLKEITALPQSSLELAESLEQLRWLENGYTIKAGITEVETIGIDTPQD 238
Query: 282 VEKIESFMRER 292
+E+ E F+ +R
Sbjct: 239 LERAERFLLDR 249
>gi|323496033|ref|ZP_08101096.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio sinaloensis
DSM 21326]
gi|323318924|gb|EGA71872.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio sinaloensis
DSM 21326]
Length = 251
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/243 (41%), Positives = 143/243 (58%), Gaps = 7/243 (2%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR+ SSR GKPL +I GKPMIQ +E+++ A D ++VATDD ++ + +FG
Sbjct: 6 IIPARYQSSRLPGKPLADIAGKPMIQWVYEQAQQAGA-DQVIVATDDVRVEQVVTEFGGQ 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS +GTER E ++ + D I+VN+QGDEPLI P II V L + +
Sbjct: 65 VCMTSPDHESGTERLAEVVKLMNIAEDHIIVNVQGDEPLIPPAIIRQVADNLANSRAPMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKV--NPQF--PYLLHLGI 227
+ AV + F+PN VK + D GYA+YFSR IP+++ N + P + H+GI
Sbjct: 125 TLAVEIADESEVFNPNAVKVLTDKDGYAMYFSRATIPWDRDNFALENKKIAQPLMRHIGI 184
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKIE 286
+Y + F+ Y PT L+ E LEQL+VL G K+ V + + A GVD PED+E +
Sbjct: 185 YAYRAGFINTYINWEPTALERIECLEQLRVLWYGEKIHVEVAKESPAAGVDTPEDLEAVR 244
Query: 287 SFM 289
+ +
Sbjct: 245 ALV 247
>gi|423107613|ref|ZP_17095308.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella oxytoca
10-5243]
gi|423113556|ref|ZP_17101247.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella oxytoca
10-5245]
gi|376387825|gb|EHT00528.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella oxytoca
10-5243]
gi|376388242|gb|EHT00942.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella oxytoca
10-5245]
Length = 248
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/246 (41%), Positives = 146/246 (59%), Gaps = 7/246 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPARFAS+R GKPL +I GKPMI ER++ + + ++VATD +A + G
Sbjct: 4 VVIIPARFASTRLPGKPLQDINGKPMIVHVLERAR-ESGAERIIVATDHADVARAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT E ++GTER E ++K D I+VNIQGDEP+I P I+ V + L A+
Sbjct: 63 GEVCMTREDHQSGTERLAEVVEKCAFSDDTIIVNIQGDEPMIPPAIVRQVAENLAASTSG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP----YLLHL 225
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ + L H+
Sbjct: 123 MATLAVPIHDAEEAFNPNAVKVVMDAAGYALYFSRATIPWDRDRFAKSREAIGDSLLRHI 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVD-HEAHGVDAPEDVEK 284
GI Y + F++ Y P+PL+ E LEQL+VL G K+ V + GVD PED+E+
Sbjct: 183 GIYGYRAGFIRRYVSWAPSPLEQIEMLEQLRVLWYGEKIHVAVAEVVPGTGVDTPEDLER 242
Query: 285 IESFMR 290
+ + +R
Sbjct: 243 VRAELR 248
>gi|298528063|ref|ZP_07015467.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase
[Desulfonatronospira thiodismutans ASO3-1]
gi|298511715|gb|EFI35617.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase
[Desulfonatronospira thiodismutans ASO3-1]
Length = 252
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 90/243 (37%), Positives = 145/243 (59%), Gaps = 5/243 (2%)
Query: 52 GIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGA 111
GIIPAR++S+RF GKPL +ILGKPM ++++ L + +ATDDE+I + +
Sbjct: 13 GIIPARYSSTRFPGKPLADILGKPMFWHVYQQAVQCRLLHRVYLATDDERIYQAAGELRV 72
Query: 112 DVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAV 170
+MTS +GT+R EA ++L + +VVNIQGDEP +EP+I+D +++ +A
Sbjct: 73 PALMTSPEHHSGTDRIMEAARQLGLARQSVVVNIQGDEPALEPKILDQLLEPFVSATGVC 132
Query: 171 FSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSY 230
+T + ++A PN VK V+ G A+YFSR IP++ G + P+L H+G+ +Y
Sbjct: 133 VTTPARRIDFQEAQSPNTVKVVISQRGRALYFSRSPIPWSHDG----EGPFLGHIGLYAY 188
Query: 231 DSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFMR 290
+ L+ + + + L+ E LEQL++LE G + V+ + HGVD PED+ + ++
Sbjct: 189 RYDILEKFQQMEQSFLEQTEKLEQLRLLEAGIPIDVVVTRYACHGVDVPEDISRTVQLLQ 248
Query: 291 ERN 293
ER
Sbjct: 249 ERQ 251
>gi|390959575|ref|YP_006423332.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Terriglobus
roseus DSM 18391]
gi|390414493|gb|AFL89997.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Terriglobus
roseus DSM 18391]
Length = 252
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/247 (39%), Positives = 142/247 (57%), Gaps = 7/247 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
+G+IPAR AS+R GK L +LG+PM+Q E + LD +VVATD E++A+ C+ G
Sbjct: 5 LGVIPARLASTRLPGKVLRPLLGRPMLQWVVEAALRCPQLDAVVVATDSEQVADLCKING 64
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAV 170
MT +GT+R L+++ DI VNIQGDEPL++PE ID +++ P
Sbjct: 65 WLCQMTDADLPSGTDRMRAV--ALQREADIYVNIQGDEPLLKPEHIDALLRPFARGPQVE 122
Query: 171 FSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKV-----NPQFPYLLHL 225
+T T PE+ +PN VK V G A+YFSR IPY++ + N + Y HL
Sbjct: 123 CTTVKTVCAPENITNPNAVKVVNATDGRALYFSRATIPYDRDANLAGDLANGKATYWKHL 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKI 285
G+ +Y L + L +PL+ E LEQL++LENG + V VD + GVD D+ ++
Sbjct: 183 GLYAYRRPALLRFGTLEASPLEQTERLEQLRLLENGLALYVEAVDFDTVGVDTEADIPRV 242
Query: 286 ESFMRER 292
E+ +R+R
Sbjct: 243 EALLRKR 249
>gi|432717972|ref|ZP_19952956.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE9]
gi|431265075|gb|ELF56772.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE9]
Length = 248
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/246 (41%), Positives = 146/246 (59%), Gaps = 7/246 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPAR+AS+R GKPLV+I GKPMI ER++ + + ++VATD E +A + G
Sbjct: 4 VVIIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGAERIIVATDHEDVARAVEATG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D ++VN+QGDEP+I II V L
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS----GKVNPQFPYLLHL 225
+ + AV E+AF+PN VK V+D+ GYA+YFSR IP+++ G +L HL
Sbjct: 123 MATLAVPIHNAEEAFNPNAVKVVLDSEGYALYFSRATIPWDRDRFAKGLETVGDNFLRHL 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI Y + F++ Y P+PL+ E LEQL+VL G K+ V + + GVD PED+E+
Sbjct: 183 GIYGYRAGFIRRYVNWQPSPLEHIEMLEQLRVLWYGEKIHVAVAQEVPGTGVDTPEDLER 242
Query: 285 IESFMR 290
+ + MR
Sbjct: 243 VRAEMR 248
>gi|28870996|ref|NP_793615.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas
syringae pv. tomato str. DC3000]
gi|213969770|ref|ZP_03397905.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas
syringae pv. tomato T1]
gi|301382846|ref|ZP_07231264.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
syringae pv. tomato Max13]
gi|302062848|ref|ZP_07254389.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
syringae pv. tomato K40]
gi|302131675|ref|ZP_07257665.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
syringae pv. tomato NCPPB 1108]
gi|422660564|ref|ZP_16722974.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
syringae pv. lachrymans str. M302278]
gi|32699540|sp|Q87YF7.1|KDSB_PSESM RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|28854245|gb|AAO57310.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas
syringae pv. tomato str. DC3000]
gi|213925578|gb|EEB59138.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas
syringae pv. tomato T1]
gi|331019167|gb|EGH99223.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
syringae pv. lachrymans str. M302278]
Length = 254
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 96/246 (39%), Positives = 144/246 (58%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ SSRF GKPL I GKPM+Q WE+++ ++ + +V+ATDD +I E C+ FGA+
Sbjct: 8 VIPARYGSSRFPGKPLKTIAGKPMVQLVWEQAR-KSSAERVVIATDDARIVEACRAFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V++T + +GT+R E +L + IVVN+QGDEPLI P +ID V L P+A
Sbjct: 67 VLLTRDDHNSGTDRLAEVATQLGLAANAIVVNVQGDEPLIPPAVIDQVAANLAKHPEAGM 126
Query: 172 STAVTSLKPEDA-FDPNRVKCVVDNHGYAIYFSRGLIPYNKSG------KVNPQFPYLLH 224
+T + A F+PN VK D +G A+ FSR +P+ + ++ PY H
Sbjct: 127 ATLAEPIDDVAALFNPNIVKVSTDINGLALTFSRAPLPWARDALARSKDELPADVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDAPEDVE 283
+GI +Y + FL + P L+ E LEQL+ L NG ++ V ++ GVD PED+E
Sbjct: 187 IGIYAYRAGFLHDFVSWGPCWLENTESLEQLRALWNGVRIHVADALEAPPGGVDTPEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|422664804|ref|ZP_16724677.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
syringae pv. aptata str. DSM 50252]
gi|330975223|gb|EGH75289.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
syringae pv. aptata str. DSM 50252]
Length = 254
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/246 (39%), Positives = 142/246 (57%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ SRF GKPL I GKPM+Q WE++ ++ + + +ATDD +I E CQ FGA+
Sbjct: 8 VIPARYGPSRFPGKPLKTIAGKPMVQLVWEQA-CKSSAERVGIATDDARIVEACQAFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V++T + +GT+R E +L D IVVN+QGDEP+I P +ID V L A P+A
Sbjct: 67 VLLTRDDHNSGTDRLAEVAAQLGLAADAIVVNVQGDEPMIPPAVIDQVASNLAAHPEAGM 126
Query: 172 STAVTSLKPEDA-FDPNRVKCVVDNHGYAIYFSRGLIPYNKSG------KVNPQFPYLLH 224
ST + A F+PN VK D +G A+ FSR +P+ + ++ PY H
Sbjct: 127 STLAEPIDDVAALFNPNIVKVATDINGLALTFSRAPLPWARDALAANRDQLPAGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDAPEDVE 283
+GI +Y + FL + P L+ E LEQL+ L NG ++ V ++ GVD PED+E
Sbjct: 187 IGIYAYRAGFLHDFVSWGPCWLENTESLEQLRALWNGVRIHVADALEAPPGGVDTPEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|108763311|ref|YP_629360.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Myxococcus
xanthus DK 1622]
gi|123374798|sp|Q1DDB3.1|KDSB_MYXXD RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|108467191|gb|ABF92376.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Myxococcus
xanthus DK 1622]
Length = 246
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 101/248 (40%), Positives = 138/248 (55%), Gaps = 10/248 (4%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
R V +IPAR AS+RF GKPL I G+ MI+ W R + A D + VATDD++I +
Sbjct: 5 RTVAVIPARHASTRFPGKPLAIIAGRTMIEHVWRRCQEAQAFDEVWVATDDDRIRAAVEG 64
Query: 109 FGADVIMTSESCRNGTERCNE-ALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
FG +MTS +C GT+R E AL + DI VN+QGDEPL++P + + Q A
Sbjct: 65 FGGKAVMTSPACATGTDRVAEVALGR--PDIDIWVNVQGDEPLVDPATLQRLAGLFQDA- 121
Query: 168 DAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPY--LLHL 225
T V L+ ++A P+ VK V+ +G A+YFSR L+P+ + P P H+
Sbjct: 122 SVRMGTLVRPLEADEAASPHVVKAVLALNGDALYFSRSLVPHVR----EPGTPVQRWGHI 177
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKI 285
G+ Y L L PTPL+ E LEQL+ LE+G ++ KV VD P DVEK+
Sbjct: 178 GLYGYRREVLLSLAKLAPTPLEDAEKLEQLRALEHGIPIRCAKVTSHTVAVDLPGDVEKV 237
Query: 286 ESFMRERN 293
E+ MR R
Sbjct: 238 EALMRARG 245
>gi|223042131|ref|ZP_03612302.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Actinobacillus
minor 202]
gi|223017070|gb|EEF15511.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Actinobacillus
minor 202]
Length = 251
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 101/250 (40%), Positives = 145/250 (58%), Gaps = 19/250 (7%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR+ASSR KPL +I+GKPMIQ WE+++ A + +++ATD +I +QFGA+
Sbjct: 6 IIPARYASSRLPRKPLADIVGKPMIQHVWEKAQQAGA-NRVIIATDHPEIESVARQFGAE 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS+ +GTER E ++K++ D I+VNIQGDEPLI P I++ V + L +
Sbjct: 65 VCMTSDKHNSGTERLAEVVEKMQIADDEIIVNIQGDEPLIPPSIVEQVARNLAENQVNMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP----------- 220
+ AV E+ F+PN VK + D +G A+YFSR IP+ + FP
Sbjct: 125 TLAVKLTTREELFNPNVVKTLNDKNGMALYFSRAPIPFGRDD-----FPHCDDAFVQQQN 179
Query: 221 YLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAH-GVDAP 279
YL H+GI +Y + F+K Y PT L+ E LEQL+ L G K+ + GVD
Sbjct: 180 YLRHIGIYAYRARFIKQYVAWQPTALEQLESLEQLRALWYGEKIHLALAKEAPQVGVDTL 239
Query: 280 EDVEKIESFM 289
ED+E++ +
Sbjct: 240 EDLERVRQIL 249
>gi|336249520|ref|YP_004593230.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Enterobacter
aerogenes KCTC 2190]
gi|444352319|ref|YP_007388463.1| 3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38)
[Enterobacter aerogenes EA1509E]
gi|334735576|gb|AEG97951.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Enterobacter
aerogenes KCTC 2190]
gi|443903149|emb|CCG30923.1| 3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38)
[Enterobacter aerogenes EA1509E]
Length = 248
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 103/246 (41%), Positives = 147/246 (59%), Gaps = 7/246 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPARFAS+R GKPL +I GKPMI ER++ + D ++VATD E +A + G
Sbjct: 4 VVIIPARFASTRLPGKPLQDINGKPMIVHVLERAR-ESGADRIIVATDHEDVARAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D I+VNIQGDEP+I I+ V + L A+
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCAFSDDTIIVNIQGDEPMIPSAIVRQVAENLAASTSG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS--GKVNPQF--PYLLHL 225
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ K + L H+
Sbjct: 123 MATLAVPIHDAEEAFNPNAVKVVMDADGYALYFSRATIPWDRDRFAKSREEIGDSLLRHI 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVD-HEAHGVDAPEDVEK 284
GI +Y + F++ Y P+PL+ E LEQL+VL G K+ V + GVD PED+E+
Sbjct: 183 GIYAYRAGFIRRYVSWAPSPLEQIEMLEQLRVLWYGEKIHVAVAEVVPGTGVDTPEDLER 242
Query: 285 IESFMR 290
+ + +R
Sbjct: 243 VRAELR 248
>gi|394987769|ref|ZP_10380608.1| hypothetical protein SCD_00169 [Sulfuricella denitrificans skB26]
gi|393792988|dbj|GAB70247.1| hypothetical protein SCD_00169 [Sulfuricella denitrificans skB26]
Length = 251
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/246 (41%), Positives = 145/246 (58%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPARFAS+R GKPL++I G+PM+ ER+ L + D + VATD + IA+ + G
Sbjct: 6 VIPARFASTRLPGKPLLDIGGRPMVLHVVERA-LESGADEVWVATDHQGIADVVRACGHQ 64
Query: 113 VIMTSESCRNGTERCNE-ALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS +GT+R E A Q+ +IVVN+QGDEPLIEP +I V + L P+A
Sbjct: 65 VCMTSSDHPSGTDRIAEVASQRGWGDDEIVVNVQGDEPLIEPSLIREVAQHLYDHPEAAI 124
Query: 172 STAVTSLK-PEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSG------KVNPQFPYLLH 224
STA ++ D F+PN VK V D G+A+YFSR IP+ + P P H
Sbjct: 125 STASHAIHDSSDLFNPNIVKVVTDRDGHALYFSRAPIPWGRDAFAVAPENFPPGLPAYRH 184
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHE-AHGVDAPEDVE 283
+GI +Y ++FLKIY L P ++ E LEQL+ L +GY++ V V+ GVD ED++
Sbjct: 185 IGIYAYRTSFLKIYKQLQPAAIEQFEALEQLRALWHGYRIGVAVVEQAPVAGVDTEEDLQ 244
Query: 284 KIESFM 289
++ +
Sbjct: 245 RVRRLL 250
>gi|423128367|ref|ZP_17116046.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella oxytoca
10-5250]
gi|376393723|gb|EHT06379.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella oxytoca
10-5250]
Length = 248
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/246 (41%), Positives = 146/246 (59%), Gaps = 7/246 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPARFAS+R GKPL +I GKPMI ER++ + + ++VATD +A + G
Sbjct: 4 VVIIPARFASTRLPGKPLQDINGKPMIVHVLERAR-ESGAERIIVATDHPDVARAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT E ++GTER E ++K D I+VNIQGDEP+I P I+ V + L A+
Sbjct: 63 GEVCMTREDHQSGTERLAEVVEKCAFSDDTIIVNIQGDEPMIPPAIVRQVAENLAASTSG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS----GKVNPQFPYLLHL 225
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ + L H+
Sbjct: 123 MATLAVPIHDAEEAFNPNAVKVVMDAEGYALYFSRATIPWDRDRFAKSRETIGDSLLRHI 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI Y + F++ Y P+PL+ E LEQL+VL G K+ V + GVD PED+E+
Sbjct: 183 GIYGYRAGFIRRYVSWTPSPLEQIEMLEQLRVLWYGEKIHVAVAKVVPGTGVDTPEDLER 242
Query: 285 IESFMR 290
+ + +R
Sbjct: 243 VRAELR 248
>gi|91212357|ref|YP_542343.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
UTI89]
gi|117625249|ref|YP_854332.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
APEC O1]
gi|218560019|ref|YP_002392932.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
S88]
gi|237706310|ref|ZP_04536791.1| 3-deoxy-manno-octulosonate cytidylyltransferase KpsU [Escherichia
sp. 3_2_53FAA]
gi|301326835|ref|ZP_07220135.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 78-1]
gi|386600971|ref|YP_006102477.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
IHE3034]
gi|386602970|ref|YP_006109270.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
UM146]
gi|417086588|ref|ZP_11953737.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
cloneA_i1]
gi|419945961|ref|ZP_14462380.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
HM605]
gi|422357489|ref|ZP_16438156.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 110-3]
gi|422749951|ref|ZP_16803862.1| cytidylyltransferase [Escherichia coli H252]
gi|422754113|ref|ZP_16807939.1| cytidylyltransferase [Escherichia coli H263]
gi|422840964|ref|ZP_16888934.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
H397]
gi|432359350|ref|ZP_19602565.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE4]
gi|432364200|ref|ZP_19607357.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE5]
gi|432575149|ref|ZP_19811623.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE55]
gi|432589334|ref|ZP_19825687.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE58]
gi|432599202|ref|ZP_19835473.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE62]
gi|432755884|ref|ZP_19990429.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE22]
gi|432779964|ref|ZP_20014185.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE59]
gi|432788956|ref|ZP_20023084.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE65]
gi|432822393|ref|ZP_20056082.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE118]
gi|432823847|ref|ZP_20057517.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE123]
gi|433006487|ref|ZP_20194911.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE227]
gi|433009151|ref|ZP_20197564.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE229]
gi|433155050|ref|ZP_20339984.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE176]
gi|433164942|ref|ZP_20349673.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE179]
gi|433169917|ref|ZP_20354540.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE180]
gi|70608397|gb|AAZ04469.1| CMP-KDO synthetase [Escherichia coli]
gi|91073931|gb|ABE08812.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
UTI89]
gi|115514373|gb|ABJ02448.1| 3-deoxy-manno-octulosonate cytidylyltransferase KpsU [Escherichia
coli APEC O1]
gi|218366788|emb|CAR04556.1| 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO
synthetase) [Escherichia coli S88]
gi|226899350|gb|EEH85609.1| 3-deoxy-manno-octulosonate cytidylyltransferase KpsU [Escherichia
sp. 3_2_53FAA]
gi|294490908|gb|ADE89664.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
IHE3034]
gi|300846510|gb|EFK74270.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 78-1]
gi|307625454|gb|ADN69758.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
UM146]
gi|315288734|gb|EFU48132.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 110-3]
gi|323951534|gb|EGB47409.1| cytidylyltransferase [Escherichia coli H252]
gi|323957569|gb|EGB53284.1| cytidylyltransferase [Escherichia coli H263]
gi|355350455|gb|EHF99654.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
cloneA_i1]
gi|371605460|gb|EHN94074.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
H397]
gi|388413790|gb|EIL73773.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
HM605]
gi|430874935|gb|ELB98486.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE4]
gi|430883962|gb|ELC06933.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE5]
gi|431105732|gb|ELE10066.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE55]
gi|431118692|gb|ELE21711.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE58]
gi|431129072|gb|ELE31248.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE62]
gi|431300159|gb|ELF89712.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE22]
gi|431325207|gb|ELG12595.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE59]
gi|431335956|gb|ELG23085.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE65]
gi|431366182|gb|ELG52680.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE118]
gi|431378372|gb|ELG63363.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE123]
gi|431511179|gb|ELH89311.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE227]
gi|431522183|gb|ELH99418.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE229]
gi|431671582|gb|ELJ37860.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE176]
gi|431684704|gb|ELJ50309.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE179]
gi|431686193|gb|ELJ51759.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE180]
Length = 246
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/242 (37%), Positives = 145/242 (59%), Gaps = 5/242 (2%)
Query: 48 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQ 107
S+ V +IPAR+ SSR GKPL++I+GKPMIQ +ER+ + + VATDD+++ + Q
Sbjct: 2 SKAVIVIPARYGSSRLPGKPLLDIVGKPMIQHVYERALQVAGVAEVWVATDDQRVEKAVQ 61
Query: 108 QFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
FG IMT +GT+R E + K+E DI +N+QGDEP+I P +D +++ ++ P
Sbjct: 62 AFGGKAIMTRNDHESGTDRLVEVMHKVEA--DIYINLQGDEPMIRPRDVDTLLQGMRDDP 119
Query: 168 DAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+T ++ E+A +P+ VK VV+ H A+YFSR IPY ++ + + YL H+GI
Sbjct: 120 ALPVATLCHAISAEEATEPSTVKVVVNTHQDALYFSRSPIPYPRNAE---KARYLKHVGI 176
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
+Y + L+ Y L + + E LEQL+++ G ++ +V GVD P +EK+ +
Sbjct: 177 YAYRRDVLQNYSQLPESMPEQAESLEQLRLMSAGINIRTFEVAATGPGVDTPACLEKVRA 236
Query: 288 FM 289
M
Sbjct: 237 LM 238
>gi|109898103|ref|YP_661358.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase
[Pseudoalteromonas atlantica T6c]
gi|123171341|sp|Q15UY4.1|KDSB_PSEA6 RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|109700384|gb|ABG40304.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase
[Pseudoalteromonas atlantica T6c]
Length = 254
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 101/242 (41%), Positives = 147/242 (60%), Gaps = 10/242 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR+AS+RF GKPLV I GKPM+Q ++R+ + + +++VATDD +IA+ FG
Sbjct: 6 IIPARYASTRFPGKPLVEINGKPMVQHVYDRA-IESGASNVIVATDDARIAKAVSDFGGK 64
Query: 113 VIMTSESCRNGTERCNEALQKLEK-KYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
MT +GTER E ++ + +IVVN+QGDEP I E I V + L A
Sbjct: 65 YCMTGAHHESGTERLAEVVEMQDMLSQEIVVNVQGDEPFIPAENIQQVAENLHHHQQAEM 124
Query: 172 ST-AVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF------PYLLH 224
+T AV + E+AF+PN VK V+D GYA+YF+R IPY+++ ++ YL H
Sbjct: 125 ATLAVKIVDVEEAFNPNAVKVVLDKQGYAMYFTRATIPYDRARFLDEDIIDEIGDYYLRH 184
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVE 283
+GI +Y + F+K Y + P+ L+ E LEQL+VL +G K+ V I G+D PED++
Sbjct: 185 VGIYAYRAGFIKQYVNMSPSGLEQIESLEQLRVLWHGEKIHVDIARKTPPAGIDTPEDLK 244
Query: 284 KI 285
+I
Sbjct: 245 RI 246
>gi|110639226|ref|YP_679435.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Cytophaga
hutchinsonii ATCC 33406]
gi|123354369|sp|Q11R71.1|KDSB_CYTH3 RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|110281907|gb|ABG60093.1| 3-deoxy-manno-octulosonate cytidylyltransferase
(CMP-3-deoxy-D-manno-octulosonate transferase)
[Cytophaga hutchinsonii ATCC 33406]
Length = 250
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/243 (39%), Positives = 142/243 (58%), Gaps = 11/243 (4%)
Query: 50 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQF 109
+V IIPAR+AS+RF GKPL+ I GK MIQ +++ + + ++VATDD++I +F
Sbjct: 7 IVAIIPARYASTRFPGKPLIQINGKTMIQCVYDQVRSTPEITEVLVATDDDRIEAEVLRF 66
Query: 110 GADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
G V+ T +GT+RC EA QKL K +D ++N+QGDEP I+PE I + L PD
Sbjct: 67 GGKVVRTLPEHPSGTDRCFEAYQKLNKPFDFIINVQGDEPFIQPEQIRTLAGIL--TPDV 124
Query: 170 VFSTAVTSLKPEDA-FDPNRVKCVVDNHGYAIYFSRGLIPY------NKSGKVNPQFPYL 222
+T + ++ E+ F+PN K +V+ +G AIYFSR IPY K N F
Sbjct: 125 ELATLIKKIEDEETLFNPNTPKVLVNANGEAIYFSRQTIPYLRQHADKKDWLANHTF--F 182
Query: 223 LHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDV 282
H+G+ +Y + L L P+ L+L E LEQL+ LE+GY + E G+D PED+
Sbjct: 183 KHIGMYAYRPDILAQITQLKPSALELAESLEQLRWLESGYSIHTAVTTIETVGIDTPEDL 242
Query: 283 EKI 285
++
Sbjct: 243 LRV 245
>gi|402842526|ref|ZP_10890938.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Klebsiella sp.
OBRC7]
gi|402279468|gb|EJU28253.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Klebsiella sp.
OBRC7]
Length = 245
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 101/244 (41%), Positives = 145/244 (59%), Gaps = 7/244 (2%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPARFAS+R GKPL +I GKPMI ER++ + + ++VATD +A + G +
Sbjct: 3 IIPARFASTRLPGKPLQDINGKPMIVHVLERAR-ESGAERIIVATDHPDVARAVEAAGGE 61
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MT E ++GTER E ++K D I+VNIQGDEP+I P I+ V + L A+ +
Sbjct: 62 VCMTREDHQSGTERLAEVVEKCAFSDDTIIVNIQGDEPMIPPAIVRQVAENLAASTSGMA 121
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP----YLLHLGI 227
+ AV E+AF+PN VK V+D GYA+YFSR IP+++ + L H+GI
Sbjct: 122 TLAVPIHDAEEAFNPNAVKVVMDAEGYALYFSRATIPWDRDRFAKSREAIGDSLLRHIGI 181
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVD-HEAHGVDAPEDVEKIE 286
Y + F++ Y P+PL+ E LEQL+VL G K+ V + GVD PED+E++
Sbjct: 182 YGYRAGFIRRYVSWAPSPLEQIEMLEQLRVLWYGEKIHVAVAEVVPGTGVDTPEDLERVR 241
Query: 287 SFMR 290
+ +R
Sbjct: 242 AELR 245
>gi|301023040|ref|ZP_07186849.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 69-1]
gi|419918045|ref|ZP_14436262.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KD2]
gi|432601455|ref|ZP_19837702.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE66]
gi|432849375|ref|ZP_20080597.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE144]
gi|300397246|gb|EFJ80784.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 69-1]
gi|388392551|gb|EIL53968.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KD2]
gi|431142389|gb|ELE44137.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE66]
gi|431401375|gb|ELG84719.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE144]
Length = 248
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/246 (41%), Positives = 145/246 (58%), Gaps = 7/246 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPAR+AS+R GKPLV+I GKPMI ER++ + + ++VATD E +A + G
Sbjct: 4 VVIIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGAERIIVATDHEDVARAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D ++VN+QGDEP+I II V L
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCAFSEDTVIVNVQGDEPMIPATIIRQVADNLAQRQVG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS----GKVNPQFPYLLHL 225
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ G +L HL
Sbjct: 123 MATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAKGLETVGDNFLRHL 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI Y + F++ Y P+PL+ E LEQL+VL G K+ V + + GVD PED+E+
Sbjct: 183 GIYGYRAGFIRRYVNWQPSPLEHIEMLEQLRVLWYGEKIHVAVAQEVPGTGVDTPEDLER 242
Query: 285 IESFMR 290
+ + MR
Sbjct: 243 VRAEMR 248
>gi|288572974|ref|ZP_06391331.1| 3-deoxy-D-manno-octulosonatecytidylyltransferase [Dethiosulfovibrio
peptidovorans DSM 11002]
gi|288568715|gb|EFC90272.1| 3-deoxy-D-manno-octulosonatecytidylyltransferase [Dethiosulfovibrio
peptidovorans DSM 11002]
Length = 242
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/234 (41%), Positives = 137/234 (58%), Gaps = 7/234 (2%)
Query: 50 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQF 109
+V +IPAR+ SSR GKPL ++ GKP+IQ +ER+ A + ++VATDDE+IA+ + F
Sbjct: 3 IVAVIPARYGSSRLPGKPLCDLGGKPVIQHVYERTMSAGRISRVMVATDDERIAQAVRSF 62
Query: 110 GADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
G + +MTS + NGT R EA++ + D VVN+QGDEP ++P ++D V L P+
Sbjct: 63 GGEAVMTSHNHPNGTCRVAEAIKGV--SCDGVVNVQGDEPFMDPALVDQVALCLCENPEI 120
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQS 229
+ L+ E+ +PNRVK VVD A+YFSR IPY + HLGI
Sbjct: 121 PMVSLRYPLEKEEIDNPNRVKVVVDQTDRALYFSRSPIPYRRVHGAT----VYGHLGIYG 176
Query: 230 YDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDV 282
Y +FL Y L PTPL E LEQL+ +E+GY + V + A G+D D+
Sbjct: 177 YRRDFLDRYISLEPTPLSESESLEQLRAIEHGYDIMVPVARGRHAPGIDTDSDL 230
>gi|121998034|ref|YP_001002821.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Halorhodospira
halophila SL1]
gi|226724294|sp|A1WWF7.1|KDSB_HALHL RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|121589439|gb|ABM62019.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Halorhodospira
halophila SL1]
Length = 257
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 94/243 (38%), Positives = 147/243 (60%), Gaps = 12/243 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ +SR GKPL ++LG+P++Q + R+ + + +VVATDD +I C+ FGA+
Sbjct: 9 VIPARYGASRLPGKPLADLLGEPVVQHVYRRA-VESGAARVVVATDDARIESACRDFGAE 67
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V++T+ GT+R E + +L + IVVN+QGDEPL+ PE++ V + L PDA
Sbjct: 68 VLLTAPDHPTGTDRIAEVVDRLALVDEAIVVNLQGDEPLMPPELVALVAERLDTDPDAAI 127
Query: 172 STAVTSLKPEDA-FDPNRVKCVVDNHGYAIYFSRGLIPYNKS-------GKVNPQFPYLL 223
+T T + D F+P+ VK V D+ +A+YFSR +P+++ G V +L
Sbjct: 128 ATLATPVTAADELFEPSVVKVVRDHRDHALYFSRAPVPWDRDRFDGIDDGAVAAGG-WLR 186
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHE-AHGVDAPEDV 282
HLG+ +Y + FL+ +PGL P P + E LEQL+ L +G+ ++V D GVD P D+
Sbjct: 187 HLGLYAYRAAFLRRFPGLEPAPPERLESLEQLRALWHGFAIQVAATDQRPGPGVDTPADL 246
Query: 283 EKI 285
E +
Sbjct: 247 EAV 249
>gi|418294225|ref|ZP_12906121.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
stutzeri ATCC 14405 = CCUG 16156]
gi|379065604|gb|EHY78347.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
stutzeri ATCC 14405 = CCUG 16156]
Length = 254
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/246 (40%), Positives = 144/246 (58%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+AS+R GKPL +I GKPMIQ WE++ + +VVATDD +I E C+ FGA
Sbjct: 8 VIPARYASTRLPGKPLRDIAGKPMIQHVWEQAS-KSAAQRVVVATDDPRIVEACKAFGAQ 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V++T +GT+R E ++L D IVVN+QGDEPLI P +ID V L A P+A
Sbjct: 67 VVLTRADHNSGTDRLAEVAEQLGLSDDAIVVNVQGDEPLIPPAVIDQVAANLAAHPEAAM 126
Query: 172 STAVTSLKPEDA-FDPNRVKCVVDNHGYAIYFSRGLIPYNKS------GKVNPQFPYLLH 224
+T L A F+PN VK + D +G A+ FSR +P+ + ++ + PY H
Sbjct: 127 ATLAEPLADVQALFNPNVVKVLSDINGLALTFSRAPLPWARDSFAADRSQLPARVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDAPEDVE 283
+GI +Y + FL + P L+ E LEQL+ L +G ++ V V+ GVD ED+E
Sbjct: 187 IGIYAYRAGFLANFVSWGPCWLEDTECLEQLRALWHGQRIHVADAVEAPPAGVDTVEDLE 246
Query: 284 KIESFM 289
++ + +
Sbjct: 247 RVRALL 252
>gi|254491529|ref|ZP_05104708.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Methylophaga
thiooxidans DMS010]
gi|224463007|gb|EEF79277.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Methylophaga
thiooxydans DMS010]
Length = 251
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/247 (40%), Positives = 147/247 (59%), Gaps = 9/247 (3%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ASSR GKPL++I GKPMIQ +ER+ + D +++ATDDE+I + FGAD
Sbjct: 6 VIPARYASSRLPGKPLLDIAGKPMIQHVYERAS-ESDADSVIIATDDERIEQVASHFGAD 64
Query: 113 VIMTSESCRNGTERCNE-ALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MT+ R+GT+R E A + DIV+N+QGDEP + +I+ V L P A
Sbjct: 65 VCMTAADHRSGTDRLAEVATLRGFADDDIVINVQGDEPCLPALLINQVAADLAEYPQADM 124
Query: 172 STAVTSLKPE-DAFDPNRVKCVVDNHGYAIYFSRGLIP-----YNKSGKVNPQFPYLLHL 225
++ + +K + FDPN VK V+D GYA+YFSR IP +++ + + P+ H+
Sbjct: 125 ASLFSRIKQQKQVFDPNVVKVVMDAQGYALYFSRAPIPWMRDHFDQDKPLPEELPHYRHI 184
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEA-HGVDAPEDVEK 284
G+ Y ++FLK Y + P L+ EE LEQL+ L +G K+ + + A HGVD D+ +
Sbjct: 185 GLYGYRASFLKSYADMTPCFLETEESLEQLRTLFHGNKIHMSEALISAGHGVDTEADLIE 244
Query: 285 IESFMRE 291
+ E
Sbjct: 245 VRQVFAE 251
>gi|330445707|ref|ZP_08309359.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
gi|328489898|dbj|GAA03856.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
Length = 248
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 100/244 (40%), Positives = 148/244 (60%), Gaps = 9/244 (3%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ S+R GKPL +I GKPM+Q +E++ + + D ++VATDD++I + + FG +
Sbjct: 6 VIPARYQSTRLPGKPLADIAGKPMVQWVYEQA-MKSGADQVIVATDDQRIVDVVKGFGGE 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V +T +GTER E +++ + D IVVN+QGDEPLI II V + A DA
Sbjct: 65 VCLTRADHESGTERLAEVVEQYQLADDHIVVNVQGDEPLIPETIIRQVADNI-AHKDAPM 123
Query: 172 STAVTSLKPED-AFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVN-PQFPY---LLHLG 226
+T + D F+PN VK V D GYA+YFSR IP+++ P+ + L H+G
Sbjct: 124 ATLAVEIDHHDEVFNPNAVKVVTDKDGYALYFSRASIPWDRDNFAKEPRIVHHNLLRHIG 183
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKI 285
I +Y + F+K Y P+ L+ E LEQL+VL G K+ V + +D A GVD PED+EK+
Sbjct: 184 IYAYRAGFIKTYINWEPSALEQIESLEQLRVLWYGEKIHVDVAIDAPAPGVDTPEDLEKV 243
Query: 286 ESFM 289
+ +
Sbjct: 244 RAIV 247
>gi|297537858|ref|YP_003673627.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Methylotenera
versatilis 301]
gi|297257205|gb|ADI29050.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Methylotenera
versatilis 301]
Length = 255
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/246 (41%), Positives = 147/246 (59%), Gaps = 9/246 (3%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+AS+R GKPL++I GKPM+ ER+K ++ +VVATDD +I + Q+G
Sbjct: 11 VIPARYASTRLPGKPLLDIAGKPMVVWVAERAK-SSGAKEIVVATDDLRIVDEVNQYGHQ 69
Query: 113 VIMTSESCRNGTERCNE-ALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V+MT +GT+R E AL + I+VN+QGDEPLIE +I V L P++V
Sbjct: 70 VMMTRADHVSGTDRIAEVALAQQWSDDAIIVNVQGDEPLIEASLIVEVANTLSNHPESVM 129
Query: 172 STAVTSLKPE-DAFDPNRVKCVVDNHGYAIYFSRGLIPYNK-----SGKVNPQFPYLLHL 225
+TA ++ + D +PN VK V+D A+YFSR IPY + + + P H+
Sbjct: 130 ATACHAIHSKADFLNPNIVKVVLDAQSNALYFSRAPIPYPRDAFATNSDLPDNMPVYRHI 189
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI +Y + FLK Y + P+ L+ E LEQL+VL +GYK+ V I + A GVD ED++
Sbjct: 190 GIYAYRAKFLKQYATIQPSALEQIESLEQLRVLHHGYKISVSISQNAPAAGVDTQEDLDY 249
Query: 285 IESFMR 290
+ S MR
Sbjct: 250 VRSVMR 255
>gi|332306132|ref|YP_004433983.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Glaciecola sp.
4H-3-7+YE-5]
gi|410645095|ref|ZP_11355563.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Glaciecola
agarilytica NO2]
gi|332173461|gb|AEE22715.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Glaciecola sp.
4H-3-7+YE-5]
gi|410135328|dbj|GAC03962.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Glaciecola
agarilytica NO2]
Length = 253
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/242 (42%), Positives = 147/242 (60%), Gaps = 10/242 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR+ASSRF GKPLV I GKPM+Q ++R+ + + +++VATDD +IA+ FG
Sbjct: 6 IIPARYASSRFPGKPLVEINGKPMVQHVYQRA-IESGASNVIVATDDARIAKVVSDFGGR 64
Query: 113 VIMTSESCRNGTERCNEALQKLEK-KYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
MT +GTER E ++ + +IVVN+QGDEP I E I V + L A
Sbjct: 65 YCMTGAHHESGTERLAEVVEMQDMLAQEIVVNVQGDEPFIPAENIQQVAENLYHHQQAEM 124
Query: 172 ST-AVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF------PYLLH 224
+T AV + E+AF+PN VK V+D GYA+YF+R IPY+++ ++ YL H
Sbjct: 125 ATLAVKIVDVEEAFNPNAVKVVLDKQGYAMYFTRATIPYDRARFLDEDIIDEIGDYYLRH 184
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVE 283
+GI +Y + F+K Y + P+ L+ E LEQL+VL +G K+ V I G+D PED++
Sbjct: 185 VGIYAYRAGFIKQYVNMSPSGLEQIESLEQLRVLWHGEKIHVDIARKTPPAGIDTPEDLK 244
Query: 284 KI 285
+I
Sbjct: 245 RI 246
>gi|167624240|ref|YP_001674534.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Shewanella
halifaxensis HAW-EB4]
gi|226724333|sp|B0TVJ0.1|KDSB_SHEHH RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|167354262|gb|ABZ76875.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shewanella
halifaxensis HAW-EB4]
Length = 245
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 101/242 (41%), Positives = 142/242 (58%), Gaps = 8/242 (3%)
Query: 50 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQF 109
V +IPAR+ SSRF GKPL I GKPMIQ +ER+ LA L + VATDDE+I + F
Sbjct: 3 VTLLIPARYGSSRFPGKPLAPINGKPMIQHVYERAALAKGLKDIYVATDDERIKNAVEGF 62
Query: 110 GADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
G V+MT +GT+R ++A+ +L D+V+N+QGD+PLI+P I+ +V + P
Sbjct: 63 GGKVVMTGADAASGTDRIDDAITQLGLADDDLVINLQGDQPLIDPISIEQLVSLCERHP- 121
Query: 169 AVFSTAVTSLKPEDAF---DPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHL 225
F A ++ D DPN VK V DN+ A+YFSR IP+ G+ + +P HL
Sbjct: 122 GEFDMATLGVEIRDEAQINDPNHVKMVFDNNFNALYFSRATIPF---GRESSDYPVYKHL 178
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKI 285
GI +Y F++ + L L+ E LEQL+ LE GYK+KV ++ VD PED+
Sbjct: 179 GIYAYTRKFIQTFAKLPLGRLEDLEKLEQLRALEYGYKIKVAISAFDSPEVDTPEDIRIC 238
Query: 286 ES 287
E+
Sbjct: 239 EA 240
>gi|293409295|ref|ZP_06652871.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
B354]
gi|331682425|ref|ZP_08383044.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
H299]
gi|450187221|ref|ZP_21889742.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
SEPT362]
gi|291469763|gb|EFF12247.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
B354]
gi|331080056|gb|EGI51235.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
H299]
gi|449323829|gb|EMD13776.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
SEPT362]
Length = 248
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/246 (41%), Positives = 145/246 (58%), Gaps = 7/246 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPAR+AS+R GKPLV+I GKPMI ER++ + + ++VATD E +A + G
Sbjct: 4 VVIIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGAERIIVATDHENVARAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D ++VN+QGDEP+I II V L
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS----GKVNPQFPYLLHL 225
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ G +L HL
Sbjct: 123 MATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAKGLETVGDNFLRHL 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI Y + F++ Y P+PL+ E LEQL+VL G K+ V + + GVD PED+E+
Sbjct: 183 GIYGYRAGFIRRYVNWQPSPLEHIEMLEQLRVLWYGEKIHVAVAQEVPGTGVDTPEDLER 242
Query: 285 IESFMR 290
+ + MR
Sbjct: 243 VRAEMR 248
>gi|423102265|ref|ZP_17089967.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella oxytoca
10-5242]
gi|376389848|gb|EHT02537.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella oxytoca
10-5242]
Length = 248
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/246 (41%), Positives = 146/246 (59%), Gaps = 7/246 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPARFAS+R GKPL +I GKPMI ER++ + + ++VATD +A + G
Sbjct: 4 VVIIPARFASTRLPGKPLQDINGKPMIVHVLERAR-ESGAERIIVATDHPDVARAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT E ++GTER E ++K D I+VNIQGDEP+I P I+ V + L A+
Sbjct: 63 GEVCMTREDHQSGTERLAEVVEKCAFSDDTIIVNIQGDEPMIPPAIVRQVAENLAASTSG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP----YLLHL 225
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ + L H+
Sbjct: 123 MATLAVPIHDAEEAFNPNAVKVVMDAEGYALYFSRATIPWDRDRFAKSREAIGDSLLRHI 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVD-HEAHGVDAPEDVEK 284
GI Y + F++ Y P+PL+ E LEQL+VL G K+ V + GVD PED+E+
Sbjct: 183 GIYGYRAGFIRRYVSWAPSPLEQIEMLEQLRVLWYGEKIHVAVAEVVPGIGVDTPEDLER 242
Query: 285 IESFMR 290
+ + +R
Sbjct: 243 VRAELR 248
>gi|397687636|ref|YP_006524955.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
stutzeri DSM 10701]
gi|395809192|gb|AFN78597.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
stutzeri DSM 10701]
Length = 254
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 100/246 (40%), Positives = 141/246 (57%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ASSR GKPL +I GKPMI+ WE++ + +VVATDD +I E C+ FGA+
Sbjct: 8 VIPARYASSRLPGKPLQDIAGKPMIRHVWEQA-CKSAAQRVVVATDDSRILEACKAFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V++T +GT+R E L D IVVN+QGDEP+I P +ID V L A P+A
Sbjct: 67 VLLTRPDHESGTDRLAEVAATLGLPVDAIVVNVQGDEPMIPPAVIDQVAANLAAHPEAAI 126
Query: 172 STAVTSLKPEDA-FDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ------FPYLLH 224
+T L A F+PN VK + D G A+ FSR +P+ + G N + PY H
Sbjct: 127 ATLAEPLADAQALFNPNVVKVLSDIDGLALTFSRAPLPWARDGFANDRNQLPAGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDAPEDVE 283
+GI +Y + FL + P L+ E LEQL+ L +G ++ V V+ GVD ED+E
Sbjct: 187 IGIYAYRAGFLADFVAWGPCWLEGTECLEQLRALWHGKRIHVADAVEAPPTGVDTAEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|266618804|pdb|3K8D|A Chain A, Crystal Structure Of E. Coli Lipopolysaccharide Specific
Cmp-Kdo Synthetase In Complex With Ctp And 2-Deoxy-Kdo
gi|266618805|pdb|3K8D|B Chain B, Crystal Structure Of E. Coli Lipopolysaccharide Specific
Cmp-Kdo Synthetase In Complex With Ctp And 2-Deoxy-Kdo
gi|266618806|pdb|3K8D|C Chain C, Crystal Structure Of E. Coli Lipopolysaccharide Specific
Cmp-Kdo Synthetase In Complex With Ctp And 2-Deoxy-Kdo
gi|266618807|pdb|3K8D|D Chain D, Crystal Structure Of E. Coli Lipopolysaccharide Specific
Cmp-Kdo Synthetase In Complex With Ctp And 2-Deoxy-Kdo
gi|266618808|pdb|3K8E|C Chain C, Crystal Structure Of E. Coli Lipopolysaccharide Specific
Cmp-Kdo Synthetase
gi|266618809|pdb|3K8E|D Chain D, Crystal Structure Of E. Coli Lipopolysaccharide Specific
Cmp-Kdo Synthetase
gi|266618810|pdb|3K8E|A Chain A, Crystal Structure Of E. Coli Lipopolysaccharide Specific
Cmp-Kdo Synthetase
gi|266618811|pdb|3K8E|B Chain B, Crystal Structure Of E. Coli Lipopolysaccharide Specific
Cmp-Kdo Synthetase
Length = 264
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/246 (41%), Positives = 145/246 (58%), Gaps = 7/246 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPAR+AS+R GKPLV+I GKPMI ER++ + + ++VATD E +A + G
Sbjct: 20 VVIIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGAERIIVATDHEDVARAVEAAG 78
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D ++VN+QGDEP+I II V L
Sbjct: 79 GEVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVG 138
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS----GKVNPQFPYLLHL 225
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ G +L HL
Sbjct: 139 MATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAEGLETVGDNFLRHL 198
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI Y + F++ Y P+PL+ E LEQL+VL G K+ V + + GVD PED+E+
Sbjct: 199 GIYGYRAGFIRRYVNWQPSPLEHIEMLEQLRVLWYGEKIHVAVAQEVPGTGVDTPEDLER 258
Query: 285 IESFMR 290
+ + MR
Sbjct: 259 VRAEMR 264
>gi|261253307|ref|ZP_05945880.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio orientalis
CIP 102891 = ATCC 33934]
gi|417954691|ref|ZP_12597722.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio orientalis
CIP 102891 = ATCC 33934]
gi|260936698|gb|EEX92687.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio orientalis
CIP 102891 = ATCC 33934]
gi|342814662|gb|EGU49597.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio orientalis
CIP 102891 = ATCC 33934]
Length = 250
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 100/247 (40%), Positives = 145/247 (58%), Gaps = 9/247 (3%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ S+R GKPL +I GKPMI+ +E++ + D ++VATDD ++ + + FG
Sbjct: 6 VIPARYQSTRLPGKPLADIGGKPMIEWVYEQA-IQAGADQVIVATDDNRVEQAVKAFGGQ 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS +GTER E ++++ D I+VN+QGDEPLI P II V L ++ +
Sbjct: 65 VCMTSPDHESGTERLAEVVEEMAIADDHIIVNVQGDEPLIPPSIITQVADNLASSQAPMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYN-----KSGKVNPQFPYLLHLG 226
+ AV + F+PN VK + D GYA+YFSR IP++ K K Q P + H+G
Sbjct: 125 TLAVEISDEAEVFNPNAVKVLTDKDGYAMYFSRATIPWDRDNFAKQDKTIAQ-PLMRHIG 183
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKI 285
I +Y + F+ Y PT L+ E LEQL+VL G K+ V + A GVD PED+E +
Sbjct: 184 IYAYRAGFINTYINWEPTALEKIECLEQLRVLWYGEKIHVEVAKQAPAAGVDTPEDLEVV 243
Query: 286 ESFMRER 292
S + +R
Sbjct: 244 RSIIAKR 250
>gi|145629079|ref|ZP_01784878.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Haemophilus
influenzae 22.1-21]
gi|144978582|gb|EDJ88305.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Haemophilus
influenzae 22.1-21]
Length = 248
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 100/223 (44%), Positives = 137/223 (61%), Gaps = 10/223 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPARFASSR GKPL +I GKPMIQ +E++ L + +++ATD+E +A+ + FGA+
Sbjct: 6 IIPARFASSRLPGKPLADIEGKPMIQHVFEKA-LQSGASRVIIATDNENVADVAKSFGAE 64
Query: 113 VIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS + +GTER E ++KL +I+VNIQGDEPLI P I+ V L +
Sbjct: 65 VCMTSVNHNSGTERLAEVVEKLAIPDNEIIVNIQGDEPLIPPVIVRQVADNLAKFNVNMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ--------FPYLL 223
S AV E+ F+PN VK + D GY +YFSR +IPY++ +N Q YL
Sbjct: 125 SLAVKIHDAEELFNPNAVKVLTDKDGYVLYFSRSVIPYDRDQFMNLQDVQKVQLSDAYLR 184
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV 266
H+GI +Y + F+K Y PT L+ E LEQL+VL NG ++ V
Sbjct: 185 HIGIYAYRAGFIKQYVQWAPTQLENLEKLEQLRVLYNGERIHV 227
>gi|398854372|ref|ZP_10610939.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas sp.
GM80]
gi|398236183|gb|EJN21977.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas sp.
GM80]
Length = 254
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 101/246 (41%), Positives = 148/246 (60%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IP+R+AS+R GKPL++I GKPMIQ WE++ ++ +VVATDD +I E C+ FGA+
Sbjct: 8 VIPSRYASTRLPGKPLLDIAGKPMIQHVWEQAS-KSSATRVVVATDDARIVEACKGFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V++T E +GT+R E KL + D IVVN+QGDEPLI P +ID V L A +A
Sbjct: 67 VVLTREDHNSGTDRLAEVAAKLGLEPDAIVVNVQGDEPLIPPTVIDQVAANLAAHTEARM 126
Query: 172 STAVTSLKPEDA-FDPNRVKCVVDNHGYAIYFSRGLIPY-----NKSGKVNPQ-FPYLLH 224
+T ++ D F+PN VK V D +G A+ FSR +P+ KS + P+ PY H
Sbjct: 127 ATLAEPIEDVDTLFNPNVVKVVSDLNGLALTFSRATLPWARDAFAKSREQLPEGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDAPEDVE 283
+GI +Y + FL+ + P L+ E LEQL+ L +G ++ V + GVD ED+E
Sbjct: 187 IGIYAYRAGFLQDFVSWGPCWLENTESLEQLRALWHGVRIHVADALIAPPTGVDTVEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|258405196|ref|YP_003197938.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Desulfohalobium
retbaense DSM 5692]
gi|257797423|gb|ACV68360.1| 3-deoxy-D-manno-octulosonatecytidylyltransferase [Desulfohalobium
retbaense DSM 5692]
Length = 244
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/244 (39%), Positives = 142/244 (58%), Gaps = 6/244 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
R +GIIPAR+ASSRF GKPL +LG+PM + R+ L +V+ATDDE+I Q
Sbjct: 4 RCIGIIPARYASSRFPGKPLAPVLGRPMFWHVYTRACRCPELSQVVLATDDERIVHSAQN 63
Query: 109 FGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
G V+MT +G++R EA + L + DI+VNIQGDEP ++P ++ VV+ +
Sbjct: 64 EGVPVVMTRSDHPSGSDRVLEAAEHLGLDEEDILVNIQGDEPALDPSMLSDVVRPFTQSA 123
Query: 168 DAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
V T V ++ +A DPN VK V G A+YFSR IPY + YL H+G+
Sbjct: 124 VRV-GTLVRAIAETEARDPNVVKAVTAPDGRALYFSRAPIPYPRDNVPA----YLGHVGL 178
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
+Y LK + L P+ L+ +E LEQL+ LE G + ++ HGVD P+D++++E
Sbjct: 179 YAYRLLSLKHFSSLGPSALEQKEHLEQLRFLEAGIPIHTVQTACRCHGVDCPDDIKRVER 238
Query: 288 FMRE 291
++E
Sbjct: 239 ILKE 242
>gi|53725859|ref|YP_103838.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Burkholderia
mallei ATCC 23344]
gi|67642111|ref|ZP_00440872.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Burkholderia
mallei GB8 horse 4]
gi|121598377|ref|YP_991919.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Burkholderia
mallei SAVP1]
gi|124386379|ref|YP_001027034.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Burkholderia
mallei NCTC 10229]
gi|126439597|ref|YP_001057976.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Burkholderia
pseudomallei 668]
gi|126448297|ref|YP_001081683.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Burkholderia
mallei NCTC 10247]
gi|126453920|ref|YP_001065209.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Burkholderia
pseudomallei 1106a]
gi|134279928|ref|ZP_01766640.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Burkholderia
pseudomallei 305]
gi|161723207|ref|YP_107501.2| 3-deoxy-manno-octulosonate cytidylyltransferase [Burkholderia
pseudomallei K96243]
gi|162210078|ref|YP_332493.2| 3-deoxy-manno-octulosonate cytidylyltransferase [Burkholderia
pseudomallei 1710b]
gi|167003880|ref|ZP_02269659.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Burkholderia
mallei PRL-20]
gi|167814571|ref|ZP_02446251.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Burkholderia
pseudomallei 91]
gi|167823043|ref|ZP_02454514.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Burkholderia
pseudomallei 9]
gi|167901595|ref|ZP_02488800.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Burkholderia
pseudomallei NCTC 13177]
gi|167909835|ref|ZP_02496926.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Burkholderia
pseudomallei 112]
gi|217419627|ref|ZP_03451133.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Burkholderia
pseudomallei 576]
gi|237811124|ref|YP_002895575.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Burkholderia
pseudomallei MSHR346]
gi|242315736|ref|ZP_04814752.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Burkholderia
pseudomallei 1106b]
gi|254175523|ref|ZP_04882183.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Burkholderia
mallei ATCC 10399]
gi|254181536|ref|ZP_04888133.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Burkholderia
pseudomallei 1655]
gi|254187494|ref|ZP_04894006.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Burkholderia
pseudomallei Pasteur 52237]
gi|254207880|ref|ZP_04914230.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Burkholderia
mallei JHU]
gi|254261255|ref|ZP_04952309.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Burkholderia
pseudomallei 1710a]
gi|254296386|ref|ZP_04963843.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Burkholderia
pseudomallei 406e]
gi|254298210|ref|ZP_04965662.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Burkholderia
pseudomallei 406e]
gi|254356223|ref|ZP_04972499.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Burkholderia
mallei 2002721280]
gi|386862710|ref|YP_006275659.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Burkholderia
pseudomallei 1026b]
gi|418390189|ref|ZP_12967983.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Burkholderia
pseudomallei 354a]
gi|418539150|ref|ZP_13104750.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Burkholderia
pseudomallei 1026a]
gi|418541788|ref|ZP_13107253.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Burkholderia
pseudomallei 1258a]
gi|418548116|ref|ZP_13113239.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Burkholderia
pseudomallei 1258b]
gi|418554232|ref|ZP_13119024.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Burkholderia
pseudomallei 354e]
gi|81604374|sp|Q62HI2.1|KDSB_BURMA RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|226724259|sp|A3MN47.1|KDSB_BURM7 RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|226724260|sp|A2S515.1|KDSB_BURM9 RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|226724261|sp|A1V116.1|KDSB_BURMS RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|226724262|sp|A3NS88.1|KDSB_BURP0 RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|226724266|sp|A3N6K5.1|KDSB_BURP6 RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|226724270|sp|Q63WL5.2|KDSB_BURPS RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|226724273|sp|Q3JVB0.2|KDSB_BURP1 RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|52429282|gb|AAU49875.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Burkholderia
mallei ATCC 23344]
gi|121227187|gb|ABM49705.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Burkholderia
mallei SAVP1]
gi|124294399|gb|ABN03668.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Burkholderia
mallei NCTC 10229]
gi|126219090|gb|ABN82596.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Burkholderia
pseudomallei 668]
gi|126227562|gb|ABN91102.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Burkholderia
pseudomallei 1106a]
gi|126241167|gb|ABO04260.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Burkholderia
mallei NCTC 10247]
gi|134249128|gb|EBA49210.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Burkholderia
pseudomallei 305]
gi|147751774|gb|EDK58841.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Burkholderia
mallei JHU]
gi|148025220|gb|EDK83374.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Burkholderia
mallei 2002721280]
gi|157806227|gb|EDO83397.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Burkholderia
pseudomallei 406e]
gi|157808255|gb|EDO85425.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Burkholderia
pseudomallei 406e]
gi|157935174|gb|EDO90844.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Burkholderia
pseudomallei Pasteur 52237]
gi|160696567|gb|EDP86537.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Burkholderia
mallei ATCC 10399]
gi|184212074|gb|EDU09117.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Burkholderia
pseudomallei 1655]
gi|217396931|gb|EEC36947.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Burkholderia
pseudomallei 576]
gi|237505932|gb|ACQ98250.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Burkholderia
pseudomallei MSHR346]
gi|238523191|gb|EEP86631.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Burkholderia
mallei GB8 horse 4]
gi|242138975|gb|EES25377.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Burkholderia
pseudomallei 1106b]
gi|243060673|gb|EES42859.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Burkholderia
mallei PRL-20]
gi|254219944|gb|EET09328.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Burkholderia
pseudomallei 1710a]
gi|385346418|gb|EIF53102.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Burkholderia
pseudomallei 1026a]
gi|385356968|gb|EIF63048.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Burkholderia
pseudomallei 1258a]
gi|385358576|gb|EIF64570.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Burkholderia
pseudomallei 1258b]
gi|385370531|gb|EIF75774.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Burkholderia
pseudomallei 354e]
gi|385375596|gb|EIF80355.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Burkholderia
pseudomallei 354a]
gi|385659838|gb|AFI67261.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Burkholderia
pseudomallei 1026b]
Length = 263
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/255 (35%), Positives = 147/255 (57%), Gaps = 14/255 (5%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V ++PAR AS+R KPL ++ GKPM+ R ER++ A ++VA+D +++ + ++ G
Sbjct: 8 VAVVPARLASTRLPNKPLADLGGKPMVVRVAERAREAGA-QQVLVASDAQRVLDAVREHG 66
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
D ++T +GT+R E KL D IVVN+QGDEPLI+P+++ V L A P
Sbjct: 67 FDAVLTRADHPSGTDRLAEVAAKLGFDDDTIVVNVQGDEPLIDPQLVRDVASHLAAHPSC 126
Query: 170 VFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKV----------NPQ 218
+TA + + + F+PN VK V+D HG A+YFSR IP+++ + P
Sbjct: 127 AIATAAHPIHEAHEVFNPNYVKVVLDAHGVALYFSRAPIPWSRDAYLPHWPNVAAMPAPT 186
Query: 219 FPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAH-GVD 277
P H+G+ +Y + FL+ YP L P++ E LEQL+ + +G ++ V +H G+D
Sbjct: 187 CPVYRHIGLYAYRARFLRTYPTLAQAPIEAAEQLEQLRAMWHGERIAVRVTEHAPEAGID 246
Query: 278 APEDVEKIESFMRER 292
P D+E++++ R R
Sbjct: 247 TPADLERVQALFRSR 261
>gi|432880654|ref|ZP_20097189.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE154]
gi|431412882|gb|ELG95681.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE154]
Length = 248
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 104/247 (42%), Positives = 146/247 (59%), Gaps = 9/247 (3%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPAR+AS+R GKPLV+I GKPMI ER++ + + ++VATD E +A + G
Sbjct: 4 VVIIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGAERIIVATDHEDVARAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D ++VN+QGDEP+I II V L
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS----GKVNPQFPYLLHL 225
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ G +L HL
Sbjct: 123 MATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAKGIETVGDNFLRHL 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHE--AHGVDAPEDVE 283
GI Y + F++ Y P+PL+ E LEQL+VL G K+ V V HE GVD PED++
Sbjct: 183 GIYGYRAGFIRRYVTWQPSPLEHIEMLEQLRVLWYGEKIHV-AVAHEVPGTGVDTPEDLK 241
Query: 284 KIESFMR 290
++ + MR
Sbjct: 242 RVRAEMR 248
>gi|410616783|ref|ZP_11327768.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Glaciecola polaris
LMG 21857]
gi|410163624|dbj|GAC31906.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Glaciecola polaris
LMG 21857]
Length = 254
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/243 (42%), Positives = 148/243 (60%), Gaps = 12/243 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR+ASSRF GKPLV I GKPM+Q ++R+ + + +++VATDD +IA+ FG
Sbjct: 6 IIPARYASSRFPGKPLVEINGKPMVQHVYQRA-IESGASNVIVATDDARIAKVVSDFGGQ 64
Query: 113 VIMTSESCRNGTERCNEA--LQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAV 170
MT +GTER E +Q + + +IVVN+QGDEP I E I V + L A
Sbjct: 65 YCMTGAHHESGTERLAEVVDMQNMLAQ-EIVVNVQGDEPFIPAENIQQVAENLHHHQQAE 123
Query: 171 FST-AVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF------PYLL 223
+T AV + E+AF+PN VK V+D GYA+YF+R IPY+++ ++ YL
Sbjct: 124 MATLAVKIVDVEEAFNPNAVKVVLDKQGYAMYFTRATIPYDRARFLDEDSIDEIGDYYLR 183
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDV 282
H+GI +Y + F+K Y + P+ L+ E LEQL+VL +G K+ V I G+D PED+
Sbjct: 184 HVGIYAYRAGFIKQYVNMSPSGLEQIESLEQLRVLWHGEKIHVDIARKTPPAGIDTPEDL 243
Query: 283 EKI 285
++I
Sbjct: 244 KRI 246
>gi|237808976|ref|YP_002893416.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Tolumonas
auensis DSM 9187]
gi|259494419|sp|C4L8W0.1|KDSB_TOLAT RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|237501237|gb|ACQ93830.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Tolumonas
auensis DSM 9187]
Length = 254
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/247 (41%), Positives = 143/247 (57%), Gaps = 11/247 (4%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V +IPAR+ SSR GKPL +I GKPMI ER+K A ++VA DDE++A G
Sbjct: 4 VVVIPARYQSSRLPGKPLADIHGKPMIAWVVERAKQAGA-SQVIVAVDDERVAAAVSALG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKAL--QAAP 167
DV MT ++GTER E +K D I+VN+QGDEPLI P II V L +AP
Sbjct: 63 VDVCMTGSHHQSGTERLAEVCEKYAFAPDTIIVNVQGDEPLIPPAIITQVADNLANTSAP 122
Query: 168 DAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNP----QFPYLL 223
A + A+ + F+PN VK V+D GYA+YFSR IP+++ G + +L
Sbjct: 123 MATLAVAIED--EHELFNPNAVKVVMDKQGYALYFSRATIPWDRDGFAQQPKQWRHTFLR 180
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDV 282
H+GI +Y + F++ Y +PL+ E LEQL+VL + K+ V + ++ GVD ED+
Sbjct: 181 HIGIYAYRAGFIRQYVSWPVSPLEQIESLEQLRVLWHSEKIHVAVAAENPPAGVDTAEDL 240
Query: 283 EKIESFM 289
EK+ F+
Sbjct: 241 EKVRRFL 247
>gi|433197523|ref|ZP_20381444.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE94]
gi|431724597|gb|ELJ88514.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE94]
Length = 248
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/246 (41%), Positives = 145/246 (58%), Gaps = 7/246 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPAR+AS+R GKPLV+I GKPMI ER++ + + ++VATD E +A + G
Sbjct: 4 VVIIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGAERIIVATDHEDVARAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D ++VN+QGDEP+I II V L
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLTQRQVG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS----GKVNPQFPYLLHL 225
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ G +L HL
Sbjct: 123 MATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAKGLETVGDNFLRHL 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI Y + F++ Y P+PL+ E LEQL+VL G K+ V + + GVD PED+E+
Sbjct: 183 GIYGYRAGFIRRYVNWQPSPLEHIEMLEQLRVLWYGEKIHVAVAQEVPGTGVDTPEDLER 242
Query: 285 IESFMR 290
+ + MR
Sbjct: 243 VRAEMR 248
>gi|398856927|ref|ZP_10612638.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas sp.
GM79]
gi|398241996|gb|EJN27627.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas sp.
GM79]
Length = 254
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/246 (41%), Positives = 146/246 (59%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IP+R+AS+R GKPL+ I GKPMIQ WE++ ++ +VVATDD +I E C+ FGAD
Sbjct: 8 VIPSRYASTRLPGKPLLLIAGKPMIQHVWEQAS-KSSAQQVVVATDDARIVEACKSFGAD 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V++T E +GT+R E KL D IVVN+QGDEPLI P +ID V L A +A
Sbjct: 67 VVLTREDHNSGTDRLAEVAAKLGLAPDAIVVNVQGDEPLIPPSVIDQVAANLAAHTEARM 126
Query: 172 STAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPY-----NKSGKVNPQ-FPYLLH 224
+T ++ E F+PN VK V D +G A+ FSR +P+ KS + P+ PY H
Sbjct: 127 ATLAEPIEDVETLFNPNVVKVVSDLNGLALTFSRATLPWARDAFAKSREQLPEGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDAPEDVE 283
+GI +Y + FL+ + P L+ E LEQL+ L +G ++ V + GVD ED+E
Sbjct: 187 IGIYAYRAGFLQDFVTWGPCWLENTESLEQLRALWHGVRIHVADALIAPPTGVDTIEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|440288266|ref|YP_007341031.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase
[Enterobacteriaceae bacterium strain FGI 57]
gi|440047788|gb|AGB78846.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase
[Enterobacteriaceae bacterium strain FGI 57]
Length = 248
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/246 (41%), Positives = 147/246 (59%), Gaps = 7/246 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPARFAS+R GKPL +I GKPMI ER++ + D ++VATD +A+ + G
Sbjct: 4 VVIIPARFASTRLPGKPLQDINGKPMIVHVLERAR-ESGADRIIVATDHPDVAKAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D IVVN+QGDEP+I II V + L A+
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCGFSDDTIVVNVQGDEPMIPAVIIRQVAENLAASKAG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS----GKVNPQFPYLLHL 225
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ + L H+
Sbjct: 123 MATLAVPIDNAEEAFNPNAVKVVMDKEGYALYFSRATIPWDRDHFAKSRETVGDSLLRHI 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI Y + F++ Y G P+PL+ E LEQL+VL G K+ V + + GVD PED+E+
Sbjct: 183 GIYGYRAGFIRRYVGWAPSPLEQIEMLEQLRVLWYGEKIHVAVAEEVPGTGVDTPEDLER 242
Query: 285 IESFMR 290
+ + M+
Sbjct: 243 VRAEMK 248
>gi|422790383|ref|ZP_16843088.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
TA007]
gi|323973207|gb|EGB68399.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
TA007]
Length = 248
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/249 (42%), Positives = 146/249 (58%), Gaps = 13/249 (5%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPAR+AS+R GKPLV+I GKPMI ER++ + + ++VATD E +A + G
Sbjct: 4 VVIIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGAERIIVATDHEDVARAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D ++VN+QGDEP+I II V L
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSG------KVNPQFPYLL 223
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ V F L
Sbjct: 123 MATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAKDLETVGDNF--LR 180
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAH--GVDAPED 281
HLGI Y + F++ Y P+PL+ E LEQL+VL G K+ V V HE GVD PED
Sbjct: 181 HLGIYGYRAGFIRRYVTWQPSPLEHIEMLEQLRVLWYGEKIHV-AVAHEVPGIGVDTPED 239
Query: 282 VEKIESFMR 290
+E++ + MR
Sbjct: 240 LERVRAEMR 248
>gi|170681729|ref|YP_001744252.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
SMS-3-5]
gi|218700563|ref|YP_002408192.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
IAI39]
gi|218704345|ref|YP_002411864.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
UMN026]
gi|222155644|ref|YP_002555783.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
LF82]
gi|293404223|ref|ZP_06648217.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
FVEC1412]
gi|298380003|ref|ZP_06989608.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
FVEC1302]
gi|300901652|ref|ZP_07119712.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 198-1]
gi|306812629|ref|ZP_07446822.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
NC101]
gi|331656989|ref|ZP_08357951.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
TA206]
gi|331662331|ref|ZP_08363254.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
TA143]
gi|386623324|ref|YP_006143052.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O7:K1 str. CE10]
gi|387606469|ref|YP_006095325.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
042]
gi|387616177|ref|YP_006119199.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O83:H1 str. NRG 857C]
gi|415837018|ref|ZP_11519268.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
RN587/1]
gi|417283076|ref|ZP_12070374.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
3003]
gi|417585857|ref|ZP_12236630.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
STEC_C165-02]
gi|419936134|ref|ZP_14453161.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
576-1]
gi|422332260|ref|ZP_16413274.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
4_1_47FAA]
gi|422372018|ref|ZP_16452386.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 16-3]
gi|422828808|ref|ZP_16876978.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
B093]
gi|425276859|ref|ZP_18668184.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
ARS4.2123]
gi|432352882|ref|ZP_19596165.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE2]
gi|432380548|ref|ZP_19623500.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE15]
gi|432386416|ref|ZP_19629312.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE16]
gi|432401115|ref|ZP_19643869.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE26]
gi|432425172|ref|ZP_19667687.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE181]
gi|432440298|ref|ZP_19682647.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE189]
gi|432445405|ref|ZP_19687711.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE191]
gi|432459944|ref|ZP_19702100.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE204]
gi|432475034|ref|ZP_19717040.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE208]
gi|432488566|ref|ZP_19730450.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE213]
gi|432513160|ref|ZP_19750395.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE224]
gi|432521614|ref|ZP_19758769.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE228]
gi|432536979|ref|ZP_19773896.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE235]
gi|432542302|ref|ZP_19779158.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE236]
gi|432547772|ref|ZP_19784559.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE237]
gi|432610591|ref|ZP_19846762.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE72]
gi|432615786|ref|ZP_19851912.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE75]
gi|432621056|ref|ZP_19857097.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE76]
gi|432630540|ref|ZP_19866484.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE80]
gi|432640142|ref|ZP_19875981.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE83]
gi|432645348|ref|ZP_19881147.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE86]
gi|432655186|ref|ZP_19890897.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE93]
gi|432665211|ref|ZP_19900795.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE116]
gi|432698272|ref|ZP_19933438.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE169]
gi|432744890|ref|ZP_19979589.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE43]
gi|432769768|ref|ZP_20004120.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE50]
gi|432774117|ref|ZP_20008401.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE54]
gi|432792137|ref|ZP_20026226.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE78]
gi|432798100|ref|ZP_20032124.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE79]
gi|432814567|ref|ZP_20048357.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE115]
gi|432838583|ref|ZP_20072072.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE140]
gi|432874092|ref|ZP_20093229.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE147]
gi|432885409|ref|ZP_20099930.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE158]
gi|432897845|ref|ZP_20108676.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE192]
gi|432903554|ref|ZP_20112970.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE194]
gi|432911484|ref|ZP_20117759.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE190]
gi|432943001|ref|ZP_20140125.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE183]
gi|432960495|ref|ZP_20150615.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE202]
gi|432971080|ref|ZP_20159955.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE207]
gi|432984548|ref|ZP_20173284.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE215]
gi|433013136|ref|ZP_20201510.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE104]
gi|433017895|ref|ZP_20206155.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE105]
gi|433022773|ref|ZP_20210785.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE106]
gi|433027943|ref|ZP_20215812.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE109]
gi|433037960|ref|ZP_20225572.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE113]
gi|433052297|ref|ZP_20239521.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE122]
gi|433062166|ref|ZP_20249120.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE125]
gi|433067177|ref|ZP_20254000.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE128]
gi|433081845|ref|ZP_20268319.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE133]
gi|433100429|ref|ZP_20286536.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE145]
gi|433143542|ref|ZP_20328706.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE168]
gi|433157907|ref|ZP_20342770.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE177]
gi|433177462|ref|ZP_20361909.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE82]
gi|433187705|ref|ZP_20371822.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE88]
gi|433202464|ref|ZP_20386261.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE95]
gi|433322238|ref|ZP_20399722.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
J96]
gi|170519447|gb|ACB17625.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
SMS-3-5]
gi|218370549|emb|CAR18356.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
IAI39]
gi|218431442|emb|CAR12320.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
UMN026]
gi|222032649|emb|CAP75388.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
LF82]
gi|284920769|emb|CBG33832.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
042]
gi|291428809|gb|EFF01834.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
FVEC1412]
gi|298279701|gb|EFI21209.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
FVEC1302]
gi|300354945|gb|EFJ70815.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 198-1]
gi|305853392|gb|EFM53831.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
NC101]
gi|312945438|gb|ADR26265.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O83:H1 str. NRG 857C]
gi|315296225|gb|EFU55532.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 16-3]
gi|323190738|gb|EFZ76007.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
RN587/1]
gi|331055237|gb|EGI27246.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
TA206]
gi|331060753|gb|EGI32717.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
TA143]
gi|345339013|gb|EGW71439.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
STEC_C165-02]
gi|349737062|gb|AEQ11768.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O7:K1 str. CE10]
gi|371612369|gb|EHO00881.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
B093]
gi|373246809|gb|EHP66259.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
4_1_47FAA]
gi|386244281|gb|EII86013.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
3003]
gi|388401892|gb|EIL62501.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
576-1]
gi|408205951|gb|EKI30774.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
ARS4.2123]
gi|430877356|gb|ELC00807.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE2]
gi|430909337|gb|ELC30722.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE16]
gi|430910603|gb|ELC31910.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE15]
gi|430927713|gb|ELC48276.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE26]
gi|430958406|gb|ELC77000.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE181]
gi|430968363|gb|ELC85589.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE189]
gi|430975247|gb|ELC92149.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE191]
gi|430990602|gb|ELD07023.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE204]
gi|431008068|gb|ELD22875.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE208]
gi|431022764|gb|ELD36024.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE213]
gi|431043757|gb|ELD54038.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE228]
gi|431044199|gb|ELD54479.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE224]
gi|431072556|gb|ELD80307.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE235]
gi|431076556|gb|ELD84051.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE236]
gi|431083708|gb|ELD89880.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE237]
gi|431150932|gb|ELE51974.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE72]
gi|431156435|gb|ELE57108.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE75]
gi|431161522|gb|ELE61993.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE76]
gi|431173575|gb|ELE73651.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE80]
gi|431182579|gb|ELE82396.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE86]
gi|431184002|gb|ELE83768.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE83]
gi|431193797|gb|ELE93071.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE93]
gi|431202846|gb|ELF01523.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE116]
gi|431246412|gb|ELF40678.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE169]
gi|431294366|gb|ELF84546.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE43]
gi|431317225|gb|ELG05005.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE50]
gi|431319462|gb|ELG07132.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE54]
gi|431341239|gb|ELG28252.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE78]
gi|431344251|gb|ELG31189.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE79]
gi|431366790|gb|ELG53287.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE115]
gi|431391049|gb|ELG74697.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE140]
gi|431404078|gb|ELG87336.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE147]
gi|431418455|gb|ELH00850.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE158]
gi|431428572|gb|ELH10513.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE192]
gi|431435341|gb|ELH16952.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE194]
gi|431443191|gb|ELH24268.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE190]
gi|431452396|gb|ELH32841.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE183]
gi|431477702|gb|ELH57464.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE202]
gi|431485336|gb|ELH64998.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE207]
gi|431504553|gb|ELH83178.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE215]
gi|431534267|gb|ELI10751.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE104]
gi|431535868|gb|ELI12204.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE105]
gi|431539510|gb|ELI15261.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE106]
gi|431544939|gb|ELI19749.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE109]
gi|431554130|gb|ELI28012.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE113]
gi|431574734|gb|ELI47497.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE122]
gi|431586792|gb|ELI58178.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE125]
gi|431589702|gb|ELI60915.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE128]
gi|431605680|gb|ELI75069.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE133]
gi|431621886|gb|ELI90676.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE145]
gi|431664900|gb|ELJ31628.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE168]
gi|431680911|gb|ELJ46724.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE177]
gi|431708705|gb|ELJ73213.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE88]
gi|431708978|gb|ELJ73479.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE82]
gi|431725104|gb|ELJ89015.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE95]
gi|432349167|gb|ELL43597.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
J96]
Length = 248
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/246 (41%), Positives = 145/246 (58%), Gaps = 7/246 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPAR+AS+R GKPLV+I GKPMI ER++ + + ++VATD E +A + G
Sbjct: 4 VVIIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGAERIIVATDHEDVARAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D ++VN+QGDEP+I II V L
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS----GKVNPQFPYLLHL 225
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ G +L HL
Sbjct: 123 MATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAKGLETVGDNFLRHL 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI Y + F++ Y P+PL+ E LEQL+VL G K+ V + + GVD PED+E+
Sbjct: 183 GIYGYRAGFIRRYVNWQPSPLEHIEMLEQLRVLWYGEKIHVAVAQEVPGTGVDTPEDLER 242
Query: 285 IESFMR 290
+ + MR
Sbjct: 243 VRAEMR 248
>gi|227537203|ref|ZP_03967252.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Sphingobacterium
spiritivorum ATCC 33300]
gi|227242918|gb|EEI92933.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Sphingobacterium
spiritivorum ATCC 33300]
Length = 246
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/249 (41%), Positives = 147/249 (59%), Gaps = 11/249 (4%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR+ASSRF GKPLV+I GK MIQR +E+ K L +VVATDD +I E +
Sbjct: 2 KTIGIIPARYASSRFPGKPLVDIAGKSMIQRVYEQVKQTPGLHEVVVATDDTRIEEHVRS 61
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
F +V++TSE+ +GT+RC E + K+ +DI VNIQGDEP I P I+ ++ +
Sbjct: 62 FAGNVVLTSETHESGTDRCAEVISKV-SGFDIAVNIQGDEPFINPLQIELLISCFKNEHT 120
Query: 169 AVFSTAVTSLKPE-DAFDPNRVKCVVDNHGYAIYFSRGLIPY-----NKSGKVNPQFPYL 222
+ +T V + E + + N K V G AIYFSR IP+ K+ + QF
Sbjct: 121 QI-ATLVKEIHTEAELLNVNIPKVVRSVSGEAIYFSRQTIPFIRNTEQKNWLTSHQF--Y 177
Query: 223 LHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDV 282
H+GI Y +N L+ L + L+ E LEQL+ +ENGY+++ HE VD PED+
Sbjct: 178 KHIGIYGYRANILQELTKLPVSILEKAESLEQLRWVENGYRIQTAVTTHETIAVDTPEDL 237
Query: 283 EKI-ESFMR 290
E I +++ R
Sbjct: 238 EHIMQTYFR 246
>gi|254480768|ref|ZP_05094015.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [marine gamma
proteobacterium HTCC2148]
gi|214039351|gb|EEB80011.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [marine gamma
proteobacterium HTCC2148]
Length = 254
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 101/251 (40%), Positives = 139/251 (55%), Gaps = 13/251 (5%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ SSR GKPL++I GKPMIQR WE++ A +V+ATDD++I E FGA
Sbjct: 6 VIPARYGSSRLPGKPLLDIAGKPMIQRVWEQAHGAGA-SEVVIATDDKRIEEVAHGFGAQ 64
Query: 113 VIMTSESCRNGTERCNE-ALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MT S +GT+R E A Q+ IVVN+QGDEPLI P ++ V L A P A
Sbjct: 65 VCMTDPSHSSGTDRLQEVAAQRGWNDQQIVVNVQGDEPLIPPALVGQVATNLGANPSAAI 124
Query: 172 ST---AVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSG-----KVNPQFPYLL 223
+T +T L + + N VK V D+ G A+YFSR +IP+ + P +
Sbjct: 125 ATLSEPITDLN--ELTNSNAVKVVTDSQGMALYFSRAVIPWPREAFGLNQAAMPAGSWFR 182
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDV 282
H+GI +Y FL Y P++ E LEQL+ L NG ++ V + + GVD ED+
Sbjct: 183 HIGIYAYRVGFLHRYVTWASAPMEQLEQLEQLRALYNGERIHVDLASETVPGGVDTAEDL 242
Query: 283 EKIESFMRERN 293
+ + M RN
Sbjct: 243 QAVRRLMENRN 253
>gi|16128885|ref|NP_415438.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
str. K-12 substr. MG1655]
gi|157160439|ref|YP_001457757.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
HS]
gi|170020680|ref|YP_001725634.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
ATCC 8739]
gi|170080576|ref|YP_001729896.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
str. K-12 substr. DH10B]
gi|188494310|ref|ZP_03001580.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
53638]
gi|194438747|ref|ZP_03070834.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
101-1]
gi|238900176|ref|YP_002925972.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
BW2952]
gi|251784460|ref|YP_002998764.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
BL21(DE3)]
gi|253774053|ref|YP_003036884.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254161032|ref|YP_003044140.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli B
str. REL606]
gi|254287840|ref|YP_003053588.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
BL21(DE3)]
gi|297516350|ref|ZP_06934736.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
OP50]
gi|300929613|ref|ZP_07145075.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 187-1]
gi|301022412|ref|ZP_07186295.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 196-1]
gi|301643438|ref|ZP_07243486.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 146-1]
gi|312971046|ref|ZP_07785225.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
1827-70]
gi|331641444|ref|ZP_08342579.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
H736]
gi|386280034|ref|ZP_10057704.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia sp.
4_1_40B]
gi|386596247|ref|YP_006092647.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DH1]
gi|386613191|ref|YP_006132857.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
UMNK88]
gi|386704098|ref|YP_006167945.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
P12b]
gi|387611458|ref|YP_006114574.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
ETEC H10407]
gi|387620643|ref|YP_006128270.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
DH1]
gi|388477002|ref|YP_489190.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
str. K-12 substr. W3110]
gi|404374242|ref|ZP_10979461.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia sp.
1_1_43]
gi|415773286|ref|ZP_11485918.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
3431]
gi|416280197|ref|ZP_11645219.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Shigella boydii
ATCC 9905]
gi|417261610|ref|ZP_12049098.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
2.3916]
gi|417274608|ref|ZP_12061948.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
2.4168]
gi|417276418|ref|ZP_12063748.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
3.2303]
gi|417612016|ref|ZP_12262488.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
STEC_EH250]
gi|417633553|ref|ZP_12283772.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
STEC_S1191]
gi|417689056|ref|ZP_12338293.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shigella boydii
5216-82]
gi|417943910|ref|ZP_12587156.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
XH140A]
gi|417975241|ref|ZP_12616041.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
XH001]
gi|418301855|ref|ZP_12913649.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
UMNF18]
gi|418958745|ref|ZP_13510655.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
J53]
gi|419141442|ref|ZP_13686196.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC6A]
gi|419147270|ref|ZP_13691960.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC6B]
gi|419152841|ref|ZP_13697424.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC6C]
gi|419158260|ref|ZP_13702777.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC6D]
gi|419163229|ref|ZP_13707704.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC6E]
gi|419174643|ref|ZP_13718494.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC7B]
gi|419809428|ref|ZP_14334313.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O32:H37 str. P4]
gi|421775859|ref|ZP_16212466.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
AD30]
gi|422765491|ref|ZP_16819218.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
E1520]
gi|422785510|ref|ZP_16838249.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
H489]
gi|422819946|ref|ZP_16868156.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
M919]
gi|423701765|ref|ZP_17676224.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
H730]
gi|425114281|ref|ZP_18516102.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
8.0566]
gi|425118990|ref|ZP_18520711.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
8.0569]
gi|425271709|ref|ZP_18663202.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
TW15901]
gi|425282334|ref|ZP_18673437.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
TW00353]
gi|425305778|ref|ZP_18695489.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
N1]
gi|432415907|ref|ZP_19658531.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE44]
gi|432484611|ref|ZP_19726531.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE212]
gi|432562917|ref|ZP_19799537.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE51]
gi|432579615|ref|ZP_19816046.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE56]
gi|432626523|ref|ZP_19862504.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE77]
gi|432636191|ref|ZP_19872073.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE81]
gi|432660145|ref|ZP_19895795.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE111]
gi|432669863|ref|ZP_19905403.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE119]
gi|432684755|ref|ZP_19920064.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE156]
gi|432690842|ref|ZP_19926081.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE161]
gi|432703489|ref|ZP_19938608.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE171]
gi|432954217|ref|ZP_20146336.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE197]
gi|433047056|ref|ZP_20234464.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE120]
gi|433172748|ref|ZP_20357300.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE232]
gi|442595302|ref|ZP_21013151.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O10:K5(L):H4 str. ATCC 23506]
gi|442599791|ref|ZP_21017496.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O5:K4(L):H4 str. ATCC 23502]
gi|450241053|ref|ZP_21899499.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
S17]
gi|125329|sp|P04951.2|KDSB_ECOLI RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|166987638|sp|A7ZYM0.1|KDSB_ECOHS RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|189028421|sp|B1IW13.1|KDSB_ECOLC RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|229470187|sp|B1X8M2.1|KDSB_ECODH RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|259494410|sp|C4ZQ44.1|KDSB_ECOBW RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|146554|gb|AAA83877.1| CMP-KDO synthetase [Escherichia coli]
gi|1651444|dbj|BAA35664.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
str. K12 substr. W3110]
gi|1787147|gb|AAC74004.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
str. K-12 substr. MG1655]
gi|73671346|gb|AAZ80083.1| KdsB [Escherichia coli LW1655F+]
gi|157066119|gb|ABV05374.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
HS]
gi|169755608|gb|ACA78307.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
ATCC 8739]
gi|169888411|gb|ACB02118.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
str. K-12 substr. DH10B]
gi|188489509|gb|EDU64612.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
53638]
gi|194422379|gb|EDX38379.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
101-1]
gi|238859814|gb|ACR61812.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
BW2952]
gi|242376733|emb|CAQ31446.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
BL21(DE3)]
gi|253325097|gb|ACT29699.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253972933|gb|ACT38604.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli B
str. REL606]
gi|253977147|gb|ACT42817.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
BL21(DE3)]
gi|260449936|gb|ACX40358.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DH1]
gi|299881253|gb|EFI89464.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 196-1]
gi|300462450|gb|EFK25943.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 187-1]
gi|301078152|gb|EFK92958.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 146-1]
gi|309701194|emb|CBJ00494.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
ETEC H10407]
gi|310336807|gb|EFQ01974.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
1827-70]
gi|315135566|dbj|BAJ42725.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
DH1]
gi|315619112|gb|EFU99692.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
3431]
gi|320182015|gb|EFW56920.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Shigella boydii
ATCC 9905]
gi|323938024|gb|EGB34286.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
E1520]
gi|323962910|gb|EGB58484.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
H489]
gi|331038242|gb|EGI10462.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
H736]
gi|332092554|gb|EGI97627.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shigella boydii
5216-82]
gi|332342360|gb|AEE55694.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase KdsB [Escherichia
coli UMNK88]
gi|339413953|gb|AEJ55625.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
UMNF18]
gi|342364396|gb|EGU28497.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
XH140A]
gi|344195232|gb|EGV49302.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
XH001]
gi|345365365|gb|EGW97474.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
STEC_EH250]
gi|345390267|gb|EGX20066.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
STEC_S1191]
gi|359331609|dbj|BAL38056.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
str. K-12 substr. MDS42]
gi|377999057|gb|EHV62144.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC6A]
gi|377999926|gb|EHV63001.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC6B]
gi|378002191|gb|EHV65244.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC6C]
gi|378012349|gb|EHV75281.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC6D]
gi|378015449|gb|EHV78344.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC6E]
gi|378036497|gb|EHV99040.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC7B]
gi|383102266|gb|AFG39775.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
P12b]
gi|384378486|gb|EIE36367.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
J53]
gi|385157609|gb|EIF19600.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O32:H37 str. P4]
gi|385536561|gb|EIF83454.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
M919]
gi|385711753|gb|EIG48710.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
H730]
gi|386122838|gb|EIG71445.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia sp.
4_1_40B]
gi|386224737|gb|EII47072.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
2.3916]
gi|386233036|gb|EII65021.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
2.4168]
gi|386240888|gb|EII77808.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
3.2303]
gi|404292300|gb|EJZ49129.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia sp.
1_1_43]
gi|408196402|gb|EKI21683.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
TW15901]
gi|408205146|gb|EKI30046.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
TW00353]
gi|408228671|gb|EKI52198.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
N1]
gi|408458963|gb|EKJ82747.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
AD30]
gi|408571993|gb|EKK47920.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
8.0566]
gi|408572608|gb|EKK48494.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
8.0569]
gi|430942452|gb|ELC62585.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE44]
gi|431017762|gb|ELD31217.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE212]
gi|431097478|gb|ELE02806.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE51]
gi|431107605|gb|ELE11770.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE56]
gi|431164471|gb|ELE64862.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE77]
gi|431173085|gb|ELE73166.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE81]
gi|431202017|gb|ELF00713.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE111]
gi|431212393|gb|ELF10320.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE119]
gi|431223890|gb|ELF21134.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE156]
gi|431229228|gb|ELF25880.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE161]
gi|431246054|gb|ELF40332.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE171]
gi|431469515|gb|ELH49444.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE197]
gi|431570415|gb|ELI43327.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE120]
gi|431695461|gb|ELJ60768.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE232]
gi|441604539|emb|CCP98285.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O10:K5(L):H4 str. ATCC 23506]
gi|441651284|emb|CCQ02986.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O5:K4(L):H4 str. ATCC 23502]
gi|449324025|gb|EMD13966.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
S17]
Length = 248
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/246 (41%), Positives = 145/246 (58%), Gaps = 7/246 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPAR+AS+R GKPLV+I GKPMI ER++ + + ++VATD E +A + G
Sbjct: 4 VVIIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGAERIIVATDHEDVARAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D ++VN+QGDEP+I II V L
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS----GKVNPQFPYLLHL 225
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ G +L HL
Sbjct: 123 MATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAEGLETVGDNFLRHL 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI Y + F++ Y P+PL+ E LEQL+VL G K+ V + + GVD PED+E+
Sbjct: 183 GIYGYRAGFIRRYVNWQPSPLEHIEMLEQLRVLWYGEKIHVAVAQEVPGTGVDTPEDLER 242
Query: 285 IESFMR 290
+ + MR
Sbjct: 243 VRAEMR 248
>gi|347541091|ref|YP_004848517.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase
[Pseudogulbenkiania sp. NH8B]
gi|345644270|dbj|BAK78103.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase
[Pseudogulbenkiania sp. NH8B]
Length = 258
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 100/251 (39%), Positives = 139/251 (55%), Gaps = 13/251 (5%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
++PAR ASSR GKPL +I GKPM+ R E++ + ++VATD I C G
Sbjct: 8 VVPARMASSRLPGKPLADIAGKPMVVRVAEQAARSAA-RAVIVATDHPDIVTACTAHGVR 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGV--VKALQAAPDA 169
+MT +GT+R E L D I+VN+QGDEPLI+P +ID + + A P A
Sbjct: 67 AVMTRADHASGTDRLAEVAATLSLGADEIIVNVQGDEPLIDPALIDRLAGLMAESGVPMA 126
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSG---KVN---PQFPYLL 223
+ + D F+PN VK V+D G A+YFSR IPY + VN P+ P L
Sbjct: 127 TLAHPIHCAA--DVFNPNVVKVVLDRTGRALYFSRAPIPYARDAFAQDVNVLPPELPVLR 184
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKV-DHEAHGVDAPEDV 282
H+G+ +Y + FL Y L P PL+ E LEQL+VL +GY + V V D GVD P+D+
Sbjct: 185 HIGMYAYQAGFLSTYTSLTPAPLETFEALEQLRVLWHGYPIMVATVADAPPAGVDTPDDL 244
Query: 283 EKIESFMRERN 293
E++ + R+
Sbjct: 245 ERVRALFATRS 255
>gi|385331802|ref|YP_005885753.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Marinobacter
adhaerens HP15]
gi|311694952|gb|ADP97825.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Marinobacter
adhaerens HP15]
Length = 264
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/256 (39%), Positives = 146/256 (57%), Gaps = 16/256 (6%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ASSR GKPL +I GKPMIQ ER+ + D +VVATDD++I C+ FGA+
Sbjct: 6 VIPARYASSRLPGKPLADIAGKPMIQHVCERAA-ESRADRVVVATDDDRIRTACEGFGAE 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V+MTS + +GT+R E + L D VVN+QGDEPLI PE+I+ V L+ P+
Sbjct: 65 VVMTSPNHASGTDRLEEVARVLGFGPDHRVVNVQGDEPLIPPELINQVADNLEFYPEVAI 124
Query: 172 STAVTSLK-PEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS--------GKVNPQFP-- 220
+T + PE F+PN VK V D+ G A YFSR IP+ + ++ P
Sbjct: 125 ATLCERIHDPEHVFNPNVVKVVFDHRGIAHYFSRAPIPWARDQWQEGTPLTGLDAALPDN 184
Query: 221 --YLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVD 277
Y H+GI Y ++ L + P P +L E LEQL+ L NG ++ V + + GVD
Sbjct: 185 VGYFRHIGIYGYRASVLAEFVSWAPAPTELTESLEQLRALYNGARIHVDVAAVNPPGGVD 244
Query: 278 APEDVEKIESFMRERN 293
D+ ++ ++ +RN
Sbjct: 245 TDADLHRVRGWLEKRN 260
>gi|254439320|ref|ZP_05052814.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Octadecabacter
antarcticus 307]
gi|198254766|gb|EDY79080.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Octadecabacter
antarcticus 307]
Length = 266
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 110/268 (41%), Positives = 151/268 (56%), Gaps = 26/268 (9%)
Query: 50 VVGIIPARFASSRFEGKPLVNILG-----KPMIQRTWERSKLATTLDHLVVATDDEKIAE 104
V+ IIPAR+AS+R+ GKPLV + G K +I+R+W ++ T +D +VVATDD++I
Sbjct: 3 VLVIIPARYASTRYPGKPLVELRGATGESKSLIRRSWAAAQGVTGVDRVVVATDDDRIKS 62
Query: 105 CCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQ 164
+ FGA+V+MTS C+NGTERC EAL KL YDIVVN+QGD PL I+ +V L
Sbjct: 63 AAEAFGAEVVMTSTDCQNGTERCAEALDKLGGGYDIVVNLQGDAPLTPAWFIEDLVAGLS 122
Query: 165 AAPDAVFSTAVTSLKPE------DAFDPNRVKCVVDNHGY---AIYFSRGLIPYNKSGKV 215
A P A +T V D RV G A++FS+ +IPY +G+V
Sbjct: 123 AHPVAEVATPVLRCDGRALNGLLDDRRQGRVGGTTAVFGADHNALFFSKEVIPY--TGQV 180
Query: 216 ---NPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHE 272
+ P H+G+ +Y + L YP PL+ E LEQL+ LE G M ++V E
Sbjct: 181 FDDADETPVFHHVGVYAYRPSALAAYPRWASGPLEHLEGLEQLRFLERGAHMLCVEV--E 238
Query: 273 AHG-----VDAPEDVEKIESFMRERNLS 295
A G ++ P+DV KIE + E NLS
Sbjct: 239 ARGRQFWELNNPQDVPKIEKMLAEMNLS 266
>gi|52424990|ref|YP_088127.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Mannheimia
succiniciproducens MBEL55E]
gi|81609567|sp|Q65U18.1|KDSB_MANSM RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|52307042|gb|AAU37542.1| KdsB protein [Mannheimia succiniciproducens MBEL55E]
Length = 259
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 106/251 (42%), Positives = 149/251 (59%), Gaps = 15/251 (5%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPARFASSR GKPL +I GKPMI E+++L+ +VVATD+E++ + +QFG +
Sbjct: 7 IIPARFASSRLPGKPLADIAGKPMIIHVLEKARLSGA-TRVVVATDNEEVKQAVEQFGGE 65
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS +GTER E ++ L D I+VNIQGDEPLI P I+ V + L +
Sbjct: 66 VCMTSAKHNSGTERLAEVVETLNIPDDEIIVNIQGDEPLIPPVIVSQVAENLCKFKVNMA 125
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK-------SGKVNPQF----- 219
S AV + + F+PN VK + D GY +YFSR IP+N+ SG++ +
Sbjct: 126 SLAVKIHESAELFNPNAVKVLTDKDGYVLYFSRAPIPWNRDAFARLNSGELKQEELDLAD 185
Query: 220 PYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDA 278
YL H+GI +Y + F+K Y P+ L+ E LEQL+VL G K+ V + + A GVD
Sbjct: 186 HYLRHIGIYAYRAGFIKQYVQWEPSALEQIESLEQLRVLWYGEKIHVELAKEIPAVGVDT 245
Query: 279 PEDVEKIESFM 289
ED+EK+ + +
Sbjct: 246 AEDLEKVRAIL 256
>gi|118580036|ref|YP_901286.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pelobacter
propionicus DSM 2379]
gi|229830640|sp|A1APF8.1|KDSB_PELPD RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|118502746|gb|ABK99228.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pelobacter
propionicus DSM 2379]
Length = 255
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 100/254 (39%), Positives = 142/254 (55%), Gaps = 19/254 (7%)
Query: 50 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQF 109
+ +IPARFAS RF GK L I GKPMIQ +ER+ A+ +D +++ATDDE+I + F
Sbjct: 3 ITAVIPARFASVRFPGKALAIIDGKPMIQHVYERTARASLVDSVIIATDDERIQQAVSVF 62
Query: 110 GADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
G MT GT+R E L DI+VN+QGDEPLI PE+ID ++ L P
Sbjct: 63 GGVCRMTRNDHETGTDRLAEVAGTLSA--DIIVNVQGDEPLIAPEMIDQAIRPLLDDPSL 120
Query: 170 VFSTAVTSLK-PEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK------------SGKVN 216
+T + ++ D PN VK V D G A+YFSR +P+ + SGK+
Sbjct: 121 RMATLKSRIRCLHDFLSPNVVKVVTDRDGNALYFSRSPLPFFRDKWQDLKDESFASGKL- 179
Query: 217 PQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGV 276
Y H+G+ Y +FL + + PT L+ E LEQL+ LENG +++V++ + E+ GV
Sbjct: 180 --LCY-KHVGLYVYRRDFLVEFAAMAPTFLETSEKLEQLRALENGARIRVVETEFESIGV 236
Query: 277 DAPEDVEKIESFMR 290
D P+D+ K R
Sbjct: 237 DTPDDLVKARERFR 250
>gi|436841656|ref|YP_007326034.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Desulfovibrio
hydrothermalis AM13 = DSM 14728]
gi|432170562|emb|CCO23933.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Desulfovibrio
hydrothermalis AM13 = DSM 14728]
Length = 247
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 95/243 (39%), Positives = 142/243 (58%), Gaps = 7/243 (2%)
Query: 52 GIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGA 111
GIIPAR+ SSRF GKPL +I GKPM W R+ +D +V+ATD I E ++ G
Sbjct: 9 GIIPARYDSSRFPGKPLADICGKPMFWHVWNRASKCPEMDKVVLATDSSIIMEAAEKHGV 68
Query: 112 DVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAV 170
+MT+++ +GT+R EA +KL D +VVNIQGDEP + PE++ ++ A +
Sbjct: 69 PAVMTADTHTSGTDRVLEAARKLGLPSDSVVVNIQGDEPCLAPEMLSELISPF-ADGNVR 127
Query: 171 FSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSY 230
+T + + +A P+RVK + A+YFSR IP++ G + YLLH+G+ +
Sbjct: 128 VTTLASPISAAEAVSPDRVKVALAKDSRALYFSRSPIPFSHQGDGD----YLLHIGLYGF 183
Query: 231 DSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEK-IESFM 289
L+ + GL +PL+ E LEQL++LEN + V +H HGVD PED++ I+
Sbjct: 184 RMEALETFAGLPVSPLEKRERLEQLRLLENQISIHVTITEHSCHGVDRPEDLDTAIKILE 243
Query: 290 RER 292
RE+
Sbjct: 244 REK 246
>gi|70729164|ref|YP_258900.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
protegens Pf-5]
gi|123656971|sp|Q4KFT3.1|KDSB_PSEF5 RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|68343463|gb|AAY91069.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas
protegens Pf-5]
Length = 254
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 97/246 (39%), Positives = 145/246 (58%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+AS+R GKPL I GKPMIQ WE+++ ++ + +VVATDD++I E CQ FGA+
Sbjct: 8 VIPARYASTRLPGKPLQLIAGKPMIQWVWEQAR-KSSAERVVVATDDQRIVEACQGFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
++T E +GT+R E +L D IVVN+QGDEPLI P +ID V L A +A
Sbjct: 67 ALLTREDHNSGTDRLAEVAAQLGLAADAIVVNVQGDEPLIPPSVIDQVAANLAAHTEARM 126
Query: 172 STAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSG------KVNPQFPYLLH 224
+T ++ + F+PN VK V D +G A+ FSR +P+ + ++ PY H
Sbjct: 127 ATLAEPIEDVQTLFNPNVVKVVSDLNGLALTFSRATLPWARDAFAQSREQLPEGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDAPEDVE 283
+GI +Y + FL + P L+ E LEQL+ L +G ++ V ++ GVD ED+E
Sbjct: 187 IGIYAYRAGFLHDFVSWGPCWLENTESLEQLRALWHGVRIHVADALEAPPTGVDTAEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|408792376|ref|ZP_11203986.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
meyeri serovar Hardjo str. Went 5]
gi|408463786|gb|EKJ87511.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Leptospira
meyeri serovar Hardjo str. Went 5]
Length = 246
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 101/247 (40%), Positives = 140/247 (56%), Gaps = 6/247 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+++G+IPARFAS+RF GKPL I KPMIQ T+ + L+ ++ LVVATDD +I +
Sbjct: 4 QILGVIPARFASTRFPGKPLALIGTKPMIQWTYHHASLSKSIHRLVVATDDRRIHDTVIS 63
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG + + TS GT+R E +K Y I+VNIQGDEP +EP +I+GV+ +
Sbjct: 64 FGGESVFTSPDHPTGTDRIIEVAEKF-PNYGIIVNIQGDEPGMEPNLIEGVLALKTKHRN 122
Query: 169 AVFSTAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+TA ED DPN+VK V D + A YFSR IP + G+ Y HLGI
Sbjct: 123 WEMTTAAVPFTASEDPKDPNKVKVVFDRNARANYFSRSPIPASFKGEAT----YHRHLGI 178
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
+Y+ FL Y L + + E LEQL+ L+NG + V D GVD+P D+E +
Sbjct: 179 YAYEREFLMKYNHLPASDWETVESLEQLRALQNGSTIGVYLSDKANLGVDSPADLEVVIR 238
Query: 288 FMRERNL 294
+E+ L
Sbjct: 239 DFKEKGL 245
>gi|378952070|ref|YP_005209558.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
fluorescens F113]
gi|359762084|gb|AEV64163.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
fluorescens F113]
Length = 254
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 100/246 (40%), Positives = 145/246 (58%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IP+RFAS+R GKPL++I GKPMIQ WE++ ++ +VVATDD +I E C+ FGA+
Sbjct: 8 VIPSRFASTRLPGKPLLSIAGKPMIQHVWEQA-CKSSAQRVVVATDDVRIVEACKGFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V++T E +GT+R E KL D IVVN+QGDEPLI P +ID V L A +A
Sbjct: 67 VVLTREDHNSGTDRLAEVAAKLGLAADAIVVNVQGDEPLIPPSVIDQVAANLAAHTEARM 126
Query: 172 STAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSG-----KVNPQ-FPYLLH 224
+T + + F+PN VK V D +G A+ FSR +P+ + V P+ PY H
Sbjct: 127 ATLAEPIGDVQTLFNPNVVKVVSDLNGLALTFSRATLPWARDAFAQGRDVMPEGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDAPEDVE 283
+GI +Y + FL+ + P L+ E LEQL+ L +G ++ V + GVD ED+E
Sbjct: 187 IGIYAYRAGFLQDFVAWGPCWLENTEALEQLRALWHGVRIHVADALIAPPTGVDTAEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|119774775|ref|YP_927515.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Shewanella
amazonensis SB2B]
gi|226724329|sp|A1S639.1|KDSB_SHEAM RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|119767275|gb|ABL99845.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Shewanella
amazonensis SB2B]
Length = 245
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 98/245 (40%), Positives = 144/245 (58%), Gaps = 8/245 (3%)
Query: 50 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQF 109
V +IPAR+ SSRF GKPL I GKPMIQ +ER+ LA L+ + VATDDE+I + + F
Sbjct: 3 VTLLIPARYGSSRFPGKPLAPINGKPMIQHVYERAALAKGLNAIYVATDDERIKDAVESF 62
Query: 110 GADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
G V+MT +GT+R +A+ +L D+V+N+QGD+PLI+P I+ +V+ + P
Sbjct: 63 GGKVVMTGADAASGTDRIEDAITQLGLADDDLVINLQGDQPLIDPISIEQIVELFRRHP- 121
Query: 169 AVFSTAVTSLKPEDAF---DPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHL 225
F A + D DP VK V DN YA+YFSR IP+ G+ ++P HL
Sbjct: 122 GEFEMATLGYQISDKAELDDPKHVKMVFDNDMYALYFSRACIPF---GRDVSEYPVYKHL 178
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKI 285
G+ +Y F+ + L L+ E LEQL+ LE G+++KV ++ VD PED+ +
Sbjct: 179 GVYAYTRRFVHTFNSLPLGRLEDLEKLEQLRALEYGHRIKVAISAFDSPEVDTPEDIRRC 238
Query: 286 ESFMR 290
E+ ++
Sbjct: 239 ENRLK 243
>gi|336123856|ref|YP_004565904.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio anguillarum
775]
gi|335341579|gb|AEH32862.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio anguillarum
775]
Length = 250
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 100/247 (40%), Positives = 144/247 (58%), Gaps = 9/247 (3%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ S+R GKPL +I GKPMIQ +E++ L + + +V+ATDD ++ FG +
Sbjct: 6 VIPARYQSTRLPGKPLADIGGKPMIQWVYEQA-LQSGAEQVVIATDDARVEAAVHAFGGN 64
Query: 113 VIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS +GTER E ++ + + I+VN+QGDEPLI P II V L + +
Sbjct: 65 VCMTSSHHESGTERLAEVVKLMGIADHHIIVNVQGDEPLIPPSIIKQVANNLANSSAPMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK----SGKVNPQFPYLLHLGI 227
+ AV + F+PN VK V D GYA+YFSR IP+++ +G P L H+GI
Sbjct: 125 TLAVEITDQAEVFNPNAVKVVTDQEGYALYFSRATIPWDRDNFATGGQTVIQPLLRHIGI 184
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEA--HGVDAPEDVEKI 285
+Y + F+ Y P+ L+ E LEQL+VL G K+ V V EA GVD PED+E +
Sbjct: 185 YAYRAGFINTYINWQPSVLEKIECLEQLRVLWYGEKIHV-AVAKEAPPAGVDTPEDLELV 243
Query: 286 ESFMRER 292
+ + +R
Sbjct: 244 RAIVSQR 250
>gi|451947970|ref|YP_007468565.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Desulfocapsa
sulfexigens DSM 10523]
gi|451907318|gb|AGF78912.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Desulfocapsa
sulfexigens DSM 10523]
Length = 242
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 97/238 (40%), Positives = 144/238 (60%), Gaps = 4/238 (1%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+V+ IIPARF S RF GK L +ILGK MIQR +E+ + + +D + VATD + I ++
Sbjct: 2 KVIAIIPARFESKRFPGKALTDILGKTMIQRVYEQVQKSPLIDSVYVATDSDAIRTSIEE 61
Query: 109 FGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
VIMTS C +GT+R EA + L K D+V+NIQGD+P ++PE ++ +V+A P
Sbjct: 62 IDGRVIMTSAQCSSGTDRVAEAARSLHLKPDDVVINIQGDQPFLKPECLNDLVRAFTKTP 121
Query: 168 DAVFSTAVTSLK-PEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLG 226
T L E+ +PN VK + D + +AIYFSR IP+N+ + Y H+G
Sbjct: 122 ALTMGTLAHELTNEEEINNPNNVKVIFDRNSFAIYFSRAKIPFNRDNTDDTL--YYKHIG 179
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEK 284
I +Y + FL+ + L + L+ E LEQL+ +E GYK++V +H++ VD P D+EK
Sbjct: 180 IYAYSNLFLQEFTDLPYSSLENIEKLEQLRAIEAGYKIQVTVTEHDSPSVDDPTDIEK 237
>gi|194431392|ref|ZP_03063684.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shigella
dysenteriae 1012]
gi|417672776|ref|ZP_12322236.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shigella
dysenteriae 155-74]
gi|420347783|ref|ZP_14849178.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shigella boydii
965-58]
gi|194420217|gb|EDX36294.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shigella
dysenteriae 1012]
gi|332091379|gb|EGI96466.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shigella
dysenteriae 155-74]
gi|391270326|gb|EIQ29218.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shigella boydii
965-58]
Length = 248
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 102/246 (41%), Positives = 145/246 (58%), Gaps = 7/246 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPAR+AS+R GKPLV+I GKPMI ER++ + + ++VATD E +A + G
Sbjct: 4 VVIIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGAERIIVATDHEDVARAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D ++VN+QGDEP+I II V L
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS----GKVNPQFPYLLHL 225
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ G +L HL
Sbjct: 123 MATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAEGLETVGDNFLRHL 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI Y + F++ Y P+PL+ E LEQL+VL G K+ V + + GVD PED+E+
Sbjct: 183 GIYGYRAGFIRRYVNWQPSPLEHIEMLEQLRVLWFGEKIHVAVAQEVPGTGVDTPEDLER 242
Query: 285 IESFMR 290
+ + MR
Sbjct: 243 VRAEMR 248
>gi|331648728|ref|ZP_08349816.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
M605]
gi|417663533|ref|ZP_12313113.1| CMP-Kdo synthetase, KpsU [Escherichia coli AA86]
gi|330909006|gb|EGH37520.1| CMP-Kdo synthetase, KpsU [Escherichia coli AA86]
gi|331042475|gb|EGI14617.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
M605]
Length = 246
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 90/242 (37%), Positives = 144/242 (59%), Gaps = 5/242 (2%)
Query: 48 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQ 107
S+ V +IPAR+ SSR GKPL++I+GKPMIQ +ER+ + + VATDD ++ + Q
Sbjct: 2 SKAVIVIPARYGSSRLPGKPLLDIVGKPMIQHVYERALQVAGVAEVWVATDDPRVEQAVQ 61
Query: 108 QFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
FG IMT +GT+R E + +E DI +N+QGDEP+I P ++ +++ ++ P
Sbjct: 62 AFGGKAIMTRNDHESGTDRLVEVMHTVEA--DIYINLQGDEPMIRPRDVETLLQGMRDDP 119
Query: 168 DAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+T ++ E+A +P+ VK VV+ A+YFSR IPY ++ + + YL H+GI
Sbjct: 120 ALPVATLCHAISAEEATEPSTVKVVVNTRQDALYFSRSPIPYPRNAE---KARYLKHVGI 176
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
+Y + L+ Y L TPL E+LEQL+++ G ++ ++ GVD P +EK+ +
Sbjct: 177 YAYRRDVLQNYSQLPKTPLSQIEELEQLRLMNAGINIRTFEIAATGPGVDTPACLEKVRA 236
Query: 288 FM 289
M
Sbjct: 237 LM 238
>gi|37525578|ref|NP_928922.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Photorhabdus
luminescens subsp. laumondii TTO1]
gi|81572585|sp|Q7N6C2.1|KDSB_PHOLL RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|36785006|emb|CAE13927.1| 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO
synthetase) (CMP-2-keto-3-deoxyoctulosonic acid
synthetase) (CKS) [Photorhabdus luminescens subsp.
laumondii TTO1]
Length = 249
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 101/245 (41%), Positives = 142/245 (57%), Gaps = 7/245 (2%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPARFAS+R GKPL +I GKPMI R ER+K + ++VATD+ + + G +
Sbjct: 5 IIPARFASTRLPGKPLADIHGKPMIVRVMERAKRSGA-GRVIVATDNHDVVDAVVAAGGE 63
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
+T+E+ +GTER E + K + D I+VN+QGDEPLI EII V + L +
Sbjct: 64 ACLTNENHHSGTERLAEVINKYQFSDDEIIVNVQGDEPLIPEEIIKQVAENLAGCKAGMA 123
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP----YLLHLGI 227
+ AV E+AF+PN VK V+D GYA+YFSR IP+ + + + +L H+GI
Sbjct: 124 TLAVQIHDAEEAFNPNAVKVVMDKQGYALYFSRATIPWERGRFIQSRETIGDNFLRHIGI 183
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKIE 286
+Y + F++ Y P+PL+ E LEQL+VL G K+ V I + GVD PED+ I
Sbjct: 184 YAYRAGFIRRYVQWEPSPLEQIEMLEQLRVLWYGEKIHVGIALKAPGVGVDTPEDLAAIR 243
Query: 287 SFMRE 291
E
Sbjct: 244 KVFTE 248
>gi|56460616|ref|YP_155897.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Idiomarina
loihiensis L2TR]
gi|81599891|sp|Q5QU39.1|KDSB_IDILO RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|56179626|gb|AAV82348.1| CMP-2-keto-3-deoxyoctulosonic acid synthetase [Idiomarina
loihiensis L2TR]
Length = 253
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 101/244 (41%), Positives = 148/244 (60%), Gaps = 16/244 (6%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ SSR GKPL +I GKPMIQ ER++ A+ ++VATDD +I E +FG
Sbjct: 6 VIPARYGSSRLPGKPLADIAGKPMIQHVVERAE-ASGAAEVIVATDDMRIKEGVDKFGGR 64
Query: 113 VIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKAL---QAAPD 168
V+MTS +GTER E +++L + ++VVN+QGDEP I PEII V L + AP
Sbjct: 65 VMMTSSEHSSGTERLAEVIEQLALAENEVVVNVQGDEPFIPPEIIRQVADNLANQRQAPM 124
Query: 169 AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPY-------NKSGKVNPQFPY 221
A + +T ED F+PN VK V D GYA+YFSR IP+ +++ V + Y
Sbjct: 125 ATLAVPITDA--EDIFNPNTVKVVTDAAGYALYFSRAAIPWDREHFSADRATNVVTEH-Y 181
Query: 222 LLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIK-VDHEAHGVDAPE 280
H+GI +Y + F++ Y P+P++ E LEQL+VL +G ++ V + + A G+D E
Sbjct: 182 HRHIGIYAYRAGFVRRYIEWEPSPIEQLESLEQLRVLWHGERIHVAEAILAPATGIDTEE 241
Query: 281 DVEK 284
D+++
Sbjct: 242 DLQR 245
>gi|398885307|ref|ZP_10640223.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas sp.
GM60]
gi|398192683|gb|EJM79820.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas sp.
GM60]
Length = 254
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 102/246 (41%), Positives = 145/246 (58%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IP+R+AS+R GKPL+ I GKPMIQ WE++ ++ + +VVATDD +I E C FGAD
Sbjct: 8 VIPSRYASTRLPGKPLLLIAGKPMIQHVWEQA-CKSSAERVVVATDDARIVEACIAFGAD 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V++T E +GT+R E KL D IVVN+QGDEPLI P +ID V L A +A
Sbjct: 67 VVLTREDHNSGTDRLAEVAAKLGLASDAIVVNVQGDEPLIPPSVIDQVAANLAAHTEARM 126
Query: 172 STAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPY-----NKSGKVNPQ-FPYLLH 224
+T ++ E F+PN VK V D +G A+ FSR +P+ K+ V P+ PY H
Sbjct: 127 ATLAEPIEDVETLFNPNVVKVVSDLNGLALTFSRATLPWARDAFAKTRDVLPEGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDAPEDVE 283
+GI +Y + FL + P L+ E LEQL+ L +G ++ V + GVD ED+E
Sbjct: 187 IGIYAYRAGFLHDFVSWGPCWLENTESLEQLRALWHGVRIHVADALIAPPTGVDTVEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|224826276|ref|ZP_03699378.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase
[Pseudogulbenkiania ferrooxidans 2002]
gi|224601377|gb|EEG07558.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase
[Pseudogulbenkiania ferrooxidans 2002]
Length = 258
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 99/251 (39%), Positives = 140/251 (55%), Gaps = 13/251 (5%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
++PAR ASSR GKPL +I GKPM+ R E++ + ++VATD I C + G
Sbjct: 8 VVPARMASSRLPGKPLADIAGKPMVVRVAEQAARSAA-RAVIVATDHPDIVAACAEHGVR 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGV--VKALQAAPDA 169
+MT +GT+R E L D I+VN+QGDEPLI+P +ID + + A P A
Sbjct: 67 AVMTRADHASGTDRLAEVAATLSLAADEIIVNVQGDEPLIDPALIDRLAGLMAESGVPMA 126
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSG---KVN---PQFPYLL 223
+ + D F+P+ VK V+D G A+YFSR IPY + VN P+ P L
Sbjct: 127 TLAHPIHCAA--DVFNPSVVKVVLDRTGRALYFSRAPIPYARDAFAQDVNVLPPELPVLR 184
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKV-DHEAHGVDAPEDV 282
H+G+ +Y + FL Y L P PL+ E LEQL+VL +GY + V V D GVD P+D+
Sbjct: 185 HIGMYAYQAGFLSTYTSLTPAPLETFEALEQLRVLWHGYPIMVATVADAPPAGVDTPDDL 244
Query: 283 EKIESFMRERN 293
E++ + R+
Sbjct: 245 ERVRALFAARS 255
>gi|387608670|ref|YP_006097526.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
042]
gi|419919865|ref|ZP_14438005.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KD2]
gi|284922970|emb|CBG36062.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
042]
gi|388386571|gb|EIL48213.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KD2]
Length = 246
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 91/242 (37%), Positives = 145/242 (59%), Gaps = 5/242 (2%)
Query: 48 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQ 107
S+ V +IPAR+ SSR GKPL++I+GKPMIQ +ER+ + + VATDD+++ + Q
Sbjct: 2 SKAVIVIPARYGSSRLPGKPLLDIVGKPMIQHVYERALQVAGVAEVWVATDDQRVEKAVQ 61
Query: 108 QFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
FG IMT +GT+R E + K+E DI +N+QGDEP+I P ++ +++ ++ P
Sbjct: 62 AFGGKAIMTRNDHESGTDRLVEVMHKVEA--DIYINLQGDEPMIRPRDVETLLQGMRDDP 119
Query: 168 DAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+T ++ E+A +P+ VK VV+ A+YFSR IPY ++ + + YL H+GI
Sbjct: 120 ALPVATLCHAISAEEATEPSTVKVVVNTRQDALYFSRSPIPYPRNAE---KARYLKHVGI 176
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
+Y + L+ Y L T L E+LEQL+++ G ++ +V GVD P +EK+ +
Sbjct: 177 YAYRRDVLQNYSQLPRTALSQIEELEQLRLMNAGINIRTFEVAATGPGVDTPACLEKVRA 236
Query: 288 FM 289
M
Sbjct: 237 LM 238
>gi|242239633|ref|YP_002987814.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Dickeya dadantii
Ech703]
gi|242131690|gb|ACS85992.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Dickeya dadantii
Ech703]
Length = 250
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 100/247 (40%), Positives = 146/247 (59%), Gaps = 7/247 (2%)
Query: 52 GIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGA 111
IIPARFAS+R GKPL +I GKPM+ ER++ + ++VATD +A+ Q G
Sbjct: 5 AIIPARFASTRLPGKPLADINGKPMVVHVMERAR-ESGASRVIVATDHPDVAQAIAQVGG 63
Query: 112 DVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAV 170
+V +TS +GTER E +++ D I+VN+QGDEP+I P I+ V + L A+ +
Sbjct: 64 EVCLTSPDHASGTERLAEVIERYAFADDEIIVNVQGDEPMIPPSIVRQVAENLAASRAGM 123
Query: 171 FSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSG-KVNPQF---PYLLHLG 226
+ AV E+AF+PN VK V D GYA+YFSR IP+ + VN +L H+G
Sbjct: 124 ATLAVPITTSEEAFNPNAVKVVTDAEGYALYFSRATIPWERDRFAVNRDTIGDHFLRHIG 183
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKI 285
I +Y + F++ Y G P+ L+ E LEQL+VL G K+ V + + + GVD PED+ ++
Sbjct: 184 IYAYRAGFIRRYVGWAPSQLEKIEMLEQLRVLWYGEKIHVAVAQEVPSVGVDTPEDLARV 243
Query: 286 ESFMRER 292
+ M R
Sbjct: 244 RAAMTRR 250
>gi|260432002|ref|ZP_05785973.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Silicibacter
lacuscaerulensis ITI-1157]
gi|260415830|gb|EEX09089.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Silicibacter
lacuscaerulensis ITI-1157]
Length = 266
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 107/261 (40%), Positives = 148/261 (56%), Gaps = 22/261 (8%)
Query: 54 IPARFASSRFEGKPLVNILG---KPM--IQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
IPAR+AS+R+ GKPLV + G KPM I+R+W + + +D +VVATDD++I +
Sbjct: 7 IPARYASTRYPGKPLVPLTGATGKPMTLIERSWRAAMSVSGVDRVVVATDDDRIRAAAEG 66
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FGA+V+MTSESC NGTERC EA +L Y+IVVN+QGD PL I+ +V L+AAP+
Sbjct: 67 FGAEVVMTSESCANGTERCAEAHDRLGGGYEIVVNLQGDAPLTPHWFIEDLVNGLRAAPE 126
Query: 169 AVFSTAVTSLKPE--DAFDPNR-------VKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ- 218
A +T V E + +R V A+YFS+ +IP+
Sbjct: 127 AGVATPVLRCDGEALNGLLNDRRNGRVGGTTAVFATDHSALYFSKEVIPFTAETYAGSDP 186
Query: 219 FPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHG--- 275
P H+G+ +Y + L YPG PL+ E LEQL+ +ENG KV+ V+ EA G
Sbjct: 187 TPVFHHVGVYAYRPDALAAYPGWPVGPLERLEGLEQLRFMENG--RKVLCVEVEAKGRQF 244
Query: 276 --VDAPEDVEKIESFMRERNL 294
++ P+DV KIES M L
Sbjct: 245 WELNNPQDVAKIESMMAAMGL 265
>gi|148549115|ref|YP_001269217.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas
putida F1]
gi|148513173|gb|ABQ80033.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas
putida F1]
Length = 428
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 92/251 (36%), Positives = 143/251 (56%), Gaps = 5/251 (1%)
Query: 45 NFRSRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAE 104
N R+ +IPARF S+R GKPL +I GKPM+Q +ER+ +V+ATDDE++A
Sbjct: 3 NSEQRIAIVIPARFGSTRLPGKPLADIAGKPMVQHVYERALQVKNAQCVVIATDDERVAN 62
Query: 105 CCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQ 164
+ FG + +MTS +GT+R E + +++ DI +N+QGDEPL+ P I+ + +
Sbjct: 63 AVRDFGGEYVMTSPDHPSGTDRLAEVMAQVDA--DIYINLQGDEPLVRPGDIETLATGML 120
Query: 165 AAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLH 224
A D T + E+A +PN VK V+ +G A+YFSR IPY + + YL H
Sbjct: 121 ADHDVSVGTLCHLIDTEEAVNPNTVKVVLAENGNALYFSRSPIPYPRDSQTA---TYLKH 177
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEK 284
+G+ +Y L Y L ++ E LEQL++L GY ++ +V+ GVD PE +EK
Sbjct: 178 VGVYAYRRAVLSEYSRLPQPMIEHTEKLEQLRLLAAGYSIRAYRVEPTGPGVDTPECLEK 237
Query: 285 IESFMRERNLS 295
+ + + + L+
Sbjct: 238 VRALIAGQPLT 248
>gi|433199672|ref|ZP_20383562.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE94]
gi|431718884|gb|ELJ82953.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE94]
Length = 246
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 91/242 (37%), Positives = 145/242 (59%), Gaps = 5/242 (2%)
Query: 48 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQ 107
S+ V +IPAR+ SSR GKPL++I+GKPMIQ +ER+ + + VATDD+++ + Q
Sbjct: 2 SKAVIVIPARYGSSRLPGKPLLDIVGKPMIQHVYERALQVAGVAEVWVATDDQRVEKAVQ 61
Query: 108 QFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
FG IMT +GT+R E + K+E DI +N+QGDEP+I P ++ +++ ++ P
Sbjct: 62 AFGGKAIMTRNDHESGTDRLVEVMHKVEA--DIYINLQGDEPMIRPRDVETLLQGMRDDP 119
Query: 168 DAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+T ++ E+A +P+ VK VV+ A+YFSR IPY ++ + + YL H+GI
Sbjct: 120 ALPVATLCHAISAEEAAEPSTVKVVVNTRQDALYFSRSPIPYPRNAE---KARYLKHVGI 176
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
+Y + L+ Y L T L E+LEQL+++ G ++ +V GVD P +EK+ +
Sbjct: 177 YAYRRDVLQNYSQLPRTALSQIEELEQLRLMNAGINIRTFEVAATGPGVDTPACLEKVRA 236
Query: 288 FM 289
M
Sbjct: 237 LM 238
>gi|300902923|ref|ZP_07120868.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 84-1]
gi|301302473|ref|ZP_07208604.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 124-1]
gi|415860929|ref|ZP_11534644.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 85-1]
gi|417638251|ref|ZP_12288416.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
TX1999]
gi|419168906|ref|ZP_13713300.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC7A]
gi|419179889|ref|ZP_13723512.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC7C]
gi|419185448|ref|ZP_13728970.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC7D]
gi|419190643|ref|ZP_13734110.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC7E]
gi|420384547|ref|ZP_14883931.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
EPECa12]
gi|425287450|ref|ZP_18678373.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
3006]
gi|427808656|ref|ZP_18975721.1| CTP:CMP-3-deoxy-D-manno-octulosonate transferase [Escherichia coli]
gi|432530252|ref|ZP_19767292.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE233]
gi|433129271|ref|ZP_20314737.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE163]
gi|433134095|ref|ZP_20319466.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE166]
gi|443617033|ref|YP_007380889.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
APEC O78]
gi|300405065|gb|EFJ88603.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 84-1]
gi|300842312|gb|EFK70072.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 124-1]
gi|315257959|gb|EFU37927.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 85-1]
gi|345394748|gb|EGX24502.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
TX1999]
gi|378018124|gb|EHV80991.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC7A]
gi|378027074|gb|EHV89706.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC7C]
gi|378032866|gb|EHV95447.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC7D]
gi|378041880|gb|EHW04338.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC7E]
gi|391308905|gb|EIQ66592.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
EPECa12]
gi|408217737|gb|EKI41976.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
3006]
gi|412968835|emb|CCJ43461.1| CTP:CMP-3-deoxy-D-manno-octulosonate transferase [Escherichia coli]
gi|431056626|gb|ELD66127.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE233]
gi|431650554|gb|ELJ17872.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE163]
gi|431661196|gb|ELJ28012.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE166]
gi|443421541|gb|AGC86445.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
APEC O78]
Length = 248
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 104/247 (42%), Positives = 145/247 (58%), Gaps = 9/247 (3%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPAR+AS+R GKPLV+I GKPMI ER++ + + ++VATD E +A + G
Sbjct: 4 VVIIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGAERIIVATDHEDVARAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D ++VN+QGDEP+I II V L
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK----SGKVNPQFPYLLHL 225
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ G +L HL
Sbjct: 123 MATLAVPIRNAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAEGLETVGDNFLRHL 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHE--AHGVDAPEDVE 283
GI Y + F++ Y +PL+ E LEQL+VL G K+ V V HE GVD PED+E
Sbjct: 183 GIYGYRAGFIRRYVNWQASPLEHIEMLEQLRVLWYGEKIHV-AVAHEVPGTGVDTPEDLE 241
Query: 284 KIESFMR 290
++ + MR
Sbjct: 242 RVRAEMR 248
>gi|317476301|ref|ZP_07935551.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Bacteroides
eggerthii 1_2_48FAA]
gi|316907575|gb|EFV29279.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Bacteroides
eggerthii 1_2_48FAA]
Length = 252
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 99/251 (39%), Positives = 147/251 (58%), Gaps = 10/251 (3%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR+AS+RF KPL + GK +IQR +E ++A LD VATDD +I +
Sbjct: 2 KFLGIIPARYASTRFPAKPLALLGGKAVIQRVYE--QVAGVLDDAYVATDDVRIEAAVKA 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG V+MTS ++GT+RC EA K+ +D++VNIQGDEP I+P ++ VKA P
Sbjct: 60 FGGKVVMTSVHHKSGTDRCYEACTKVGDGFDVIVNIQGDEPFIQPSQLE-TVKACFNDPA 118
Query: 169 AVFSTAVTSLKPEDAFDP----NRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP---Y 221
+T V ++ F+ N K V++ + A+YFSR +IPY ++ + Y
Sbjct: 119 TQIATLVKPFTADNGFETLENVNSPKVVLNKNMNALYFSRSIIPYQRNVEKCEWLKNHIY 178
Query: 222 LLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPED 281
H+G+ +Y LK L + L+L E LEQL+ LENGY +K + E G+D P+D
Sbjct: 179 YKHIGLYAYRLEVLKEITALPQSSLELAESLEQLRWLENGYTIKAGITEVETIGIDTPQD 238
Query: 282 VEKIESFMRER 292
+E+ E F+ +R
Sbjct: 239 LERAERFLLDR 249
>gi|218691239|ref|YP_002399451.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
ED1a]
gi|300993043|ref|ZP_07180151.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 200-1]
gi|331659226|ref|ZP_08360168.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
TA206]
gi|422370610|ref|ZP_16451003.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 16-3]
gi|432423362|ref|ZP_19665901.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE178]
gi|432433168|ref|ZP_19675593.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE187]
gi|432472291|ref|ZP_19714329.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE206]
gi|432845998|ref|ZP_20078679.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE141]
gi|432900179|ref|ZP_20110601.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE192]
gi|433029866|ref|ZP_20217718.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE109]
gi|433079128|ref|ZP_20265649.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE131]
gi|433209054|ref|ZP_20392724.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE97]
gi|218428803|emb|CAR09747.2| 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO
synthetase) [Escherichia coli ED1a]
gi|300305167|gb|EFJ59687.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 200-1]
gi|315297681|gb|EFU56958.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 16-3]
gi|331053808|gb|EGI25837.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
TA206]
gi|430942671|gb|ELC62802.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE178]
gi|430951350|gb|ELC70570.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE187]
gi|430996075|gb|ELD12361.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE206]
gi|431393508|gb|ELG77072.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE141]
gi|431423952|gb|ELH06049.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE192]
gi|431541548|gb|ELI16987.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE109]
gi|431594774|gb|ELI65050.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE131]
gi|431728839|gb|ELJ92483.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE97]
Length = 246
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 90/242 (37%), Positives = 145/242 (59%), Gaps = 5/242 (2%)
Query: 48 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQ 107
S+ V +IPAR+ SSR GKPL++I+GKPMIQ +ER+ + + VATDD+++ + Q
Sbjct: 2 SKAVIVIPARYGSSRLPGKPLLDIVGKPMIQHVYERALQVAGVAEVWVATDDQRVEKAVQ 61
Query: 108 QFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
FG IMT +GT+R E + K+E DI +N+QGDEP+I P ++ +++ ++ P
Sbjct: 62 AFGGKAIMTRNDHESGTDRLVEVMHKVEA--DIYINLQGDEPMIRPRDVETLLQGMRDDP 119
Query: 168 DAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+T ++ E+A +P+ VK VV+ H A+YFSR IPY ++ + + YL H+GI
Sbjct: 120 ALPVATLCHAISAEEATEPSTVKVVVNTHQDALYFSRSPIPYPRNAE---KARYLKHVGI 176
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
+Y + L+ Y L + + E LEQL+++ G ++ +V GVD P +EK+ +
Sbjct: 177 YAYRRDVLQNYSQLPESMQEQAESLEQLRLMSAGINIRTFEVAATGPGVDTPACLEKVRA 236
Query: 288 FM 289
M
Sbjct: 237 LM 238
>gi|355641287|ref|ZP_09052172.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas sp.
2_1_26]
gi|354830885|gb|EHF14917.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas sp.
2_1_26]
Length = 254
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 97/246 (39%), Positives = 139/246 (56%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+AS+R GKPL +I G+PMIQR W +++ + +VVATDDE+I CQ FGA+
Sbjct: 8 VIPARYASTRLPGKPLQDIAGQPMIQRVWNQAR-KSAASRVVVATDDERILAACQGFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
++T +GT+R E +L D IVVN+QGDEPLI P +ID V L A P+A
Sbjct: 67 ALLTRAEHNSGTDRLEEVASRLGLASDAIVVNVQGDEPLIPPALIDQVAANLAAHPEAAI 126
Query: 172 STAVTSLKPEDA-FDPNRVKCVVDNHGYAIYFSRGLIPYNKSG------KVNPQFPYLLH 224
+T + A F+PN VK D G A+ FSR +P+ + ++ PY H
Sbjct: 127 ATLAEPIHEVSALFNPNVVKVATDIDGLALTFSRAPLPWARDAFARDRDRLPEGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKV-DHEAHGVDAPEDVE 283
+GI +Y FL + P L+ E LEQL+ L +G ++ V + GVD PED+E
Sbjct: 187 IGIYAYRVGFLADFVAWGPCWLENAESLEQLRALWHGVRIHVADARETMLPGVDTPEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRVL 252
>gi|90579514|ref|ZP_01235323.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Photobacterium
angustum S14]
gi|90439088|gb|EAS64270.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Photobacterium
angustum S14]
Length = 248
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 101/244 (41%), Positives = 146/244 (59%), Gaps = 9/244 (3%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR+ S+R GKPL +I GKPM+Q +E++ + + D ++VATDD++I + + FG +
Sbjct: 6 IIPARYQSTRLPGKPLADIAGKPMVQWVYEQA-MKSGADQVIVATDDQRIVDVVKGFGGE 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V +T +GTER E ++K + D IVVN+QGDEPLI II V + A DA
Sbjct: 65 VCLTRTDHESGTERLAEVVEKYQLSDDHIVVNVQGDEPLIPETIIRQVADNI-AHKDAPM 123
Query: 172 STAVTSLKPED-AFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKV-NPQFPY---LLHLG 226
+T + D F+PN VK V D GYA+YFSR IP+++ P+ + L H+G
Sbjct: 124 ATLAVEIDHHDEVFNPNAVKVVTDKDGYALYFSRASIPWDRDNFAKQPRIVHHNLLRHIG 183
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKI 285
I +Y + F+K Y P+ L+ E LEQL+VL G K+ V + +D GVD PED+EK+
Sbjct: 184 IYAYRAGFIKTYINCEPSALEQIESLEQLRVLWYGEKIHVDVAIDAPPAGVDTPEDLEKV 243
Query: 286 ESFM 289
+
Sbjct: 244 RQIV 247
>gi|89256692|ref|YP_514054.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Francisella
tularensis subsp. holarctica LVS]
gi|254368000|ref|ZP_04984020.1| 3-deoxy-D-manno-octulosonate cytidyltransferase [Francisella
tularensis subsp. holarctica 257]
gi|422939025|ref|YP_007012172.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Francisella
tularensis subsp. holarctica FSC200]
gi|122500491|sp|Q2A2J8.1|KDSB_FRATH RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|89144523|emb|CAJ79838.1| 3-deoxy-D-manno-octulosonate cytidyltransferase [Francisella
tularensis subsp. holarctica LVS]
gi|134253810|gb|EBA52904.1| 3-deoxy-D-manno-octulosonate cytidyltransferase [Francisella
tularensis subsp. holarctica 257]
gi|407294176|gb|AFT93082.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Francisella
tularensis subsp. holarctica FSC200]
Length = 250
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 101/246 (41%), Positives = 143/246 (58%), Gaps = 13/246 (5%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR S+R K L +I GKPMIQR +E+ + D +++ATD +KI + + FGA
Sbjct: 7 VIPARLKSTRLPNKMLADIAGKPMIQRVYEQVT-KSKFDSIIIATDSQKIKDIAESFGAK 65
Query: 113 VIMTSESCRNGTERCNEALQKLEKKY-DIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V++T + ++GT+R EA+ KL Y DIVVN+QGDEPLI E I+ + L +AV
Sbjct: 66 VVLTRDDHQSGTDRIAEAVTKLGFAYEDIVVNVQGDEPLIPIENIEQAAQLLIDKSEAVV 125
Query: 172 STAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF---PYLLHLGI 227
ST + ED ++PN VK V D + YA+YFSR IP+ + Q + H+GI
Sbjct: 126 STLCEKITDVEDIYNPNNVKVVFDKNNYALYFSRASIPFERGFSEKEQINISEFFRHIGI 185
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAH----GVDAPEDVE 283
+Y FLK Y L +P++ E LEQL+VL NGYK I ++ A GVD +D+E
Sbjct: 186 YAYRVAFLKHYAELTVSPIEKYEALEQLRVLYNGYK---IAIEQSAKSTPAGVDTLQDLE 242
Query: 284 KIESFM 289
K+
Sbjct: 243 KVRKLF 248
>gi|421522428|ref|ZP_15969069.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas
putida LS46]
gi|402753528|gb|EJX14021.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas
putida LS46]
Length = 428
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 91/241 (37%), Positives = 141/241 (58%), Gaps = 5/241 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
R+V +IPAR+ S+R GKPLV+I GKPM+Q +ER+ T+ ++VATDDE++ + +
Sbjct: 7 RIVIVIPARYGSTRLPGKPLVDIGGKPMVQHVYERALNVTSAQKVIVATDDERVQQAVLK 66
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG + ++TS ++GT+R E + ++ DI +N+QGDEPL+ PE ID + + +
Sbjct: 67 FGGECLLTSPDHQSGTDRLTEVMNYVDA--DIYINLQGDEPLVRPEDIDILTTGMISDSS 124
Query: 169 AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQ 228
T + +A P+ VK V+ N+G A+YFSR IPY + P YL H+G+
Sbjct: 125 VSIGTLCHYIDAHEANSPHTVKLVLANNGNALYFSRSPIPYARD---YPSASYLKHIGVY 181
Query: 229 SYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESF 288
+Y L Y L ++ E LEQL++L GY ++ V + GVD PE +EK+ S
Sbjct: 182 AYRREVLANYAKLPQPIIEQSEKLEQLRLLAAGYVIRAYTVSPTSPGVDTPECLEKVRSL 241
Query: 289 M 289
+
Sbjct: 242 I 242
>gi|167561814|ref|ZP_02354730.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Burkholderia
oklahomensis EO147]
gi|167569038|ref|ZP_02361912.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Burkholderia
oklahomensis C6786]
Length = 263
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 91/255 (35%), Positives = 147/255 (57%), Gaps = 14/255 (5%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V ++PAR AS+R KPL ++ GKPM+ R ER++ A ++VA+D + + + ++ G
Sbjct: 8 VAVVPARLASTRLPNKPLADLGGKPMVVRVAERAREAGA-QQVLVASDAQSVLDAVREHG 66
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
D ++T +GT+R E KL D IVVN+QGDEPLI+P+++ V L A P
Sbjct: 67 FDAVLTRADHPSGTDRLAEVAAKLGFGDDTIVVNVQGDEPLIDPQLVRDVASHLAAHPSC 126
Query: 170 VFSTAVTSLK-PEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKV----------NPQ 218
+TA L +D F+PN VK V+D +G A+YFSR IP+++ + P
Sbjct: 127 AIATAAHPLHDAQDVFNPNYVKVVLDANGVALYFSRAPIPWSRDAYLPHWPNVAAMPAPT 186
Query: 219 FPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAH-GVD 277
P H+G+ +Y + FL+ YP L P++ E LEQL+ + +G ++ V+ +H G+D
Sbjct: 187 CPVYRHIGLYAYRARFLRTYPTLAQAPIEAAEQLEQLRAMWHGERIAVLVTEHAPEAGID 246
Query: 278 APEDVEKIESFMRER 292
P D+E++++ + R
Sbjct: 247 TPADLERVQALFQSR 261
>gi|410626784|ref|ZP_11337536.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Glaciecola
mesophila KMM 241]
gi|410153704|dbj|GAC24305.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Glaciecola
mesophila KMM 241]
Length = 254
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 100/242 (41%), Positives = 147/242 (60%), Gaps = 10/242 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR+AS+RF GKPLV I GKPM+Q ++R+ + + +++VATDD +IA+ FG
Sbjct: 6 IIPARYASTRFPGKPLVEINGKPMVQHVYQRA-IESGASNVIVATDDARIAKAVSDFGGK 64
Query: 113 VIMTSESCRNGTERCNEALQKLEK-KYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
MT +GTER E ++ + +IVVN+QGDEP I E I V + L A
Sbjct: 65 YCMTGAHHESGTERLAEVVEMQDMLSQEIVVNVQGDEPFIPAENIQQVAENLHHHQQAEM 124
Query: 172 ST-AVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF------PYLLH 224
+T AV + E+AF+PN VK V+D GYA+YF+R IPY+++ ++ YL H
Sbjct: 125 ATLAVKIVDVEEAFNPNAVKVVLDKQGYAMYFTRATIPYDRARFLDEDIIDEIGDYYLRH 184
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVE 283
+GI +Y + F+K Y + P+ L+ E LEQL+VL +G K+ V I G+D P+D++
Sbjct: 185 VGIYAYRAGFIKQYVNMSPSGLEQIESLEQLRVLWHGEKIHVDIARKTPPAGIDTPDDLK 244
Query: 284 KI 285
+I
Sbjct: 245 RI 246
>gi|328684724|gb|AEB33792.1| CMP-2-keto-3-deoxyoctulosonic acid synthetase [Actinobacillus
pleuropneumoniae serovar 10]
Length = 252
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 102/248 (41%), Positives = 146/248 (58%), Gaps = 9/248 (3%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR+AS R KPL++ILGKPMIQ WER+K A +++ATD +IAE +FG +
Sbjct: 6 IIPARYASIRLPRKPLLDILGKPMIQHVWERAKQAGG-HRVIIATDHSEIAEVVTRFGGE 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V +TS+ +GTER E + K+ D I+VN+QGDE LI P II V + L +
Sbjct: 65 VCLTSDKHSSGTERLAEVVSKMNISDDEIIVNVQGDESLIPPCIIKQVAENLDNHQVNMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK------SGKVNPQFPYLLHL 225
+ AV + ++ F+PN VK + D +G A+YFSR IP+ + S Q YL H+
Sbjct: 125 TLAVKLTQRDELFNPNVVKVLSDKNGMALYFSRAAIPFARDNFPDCSDDFVTQNQYLRHI 184
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI +Y + F+K Y PT L+ E LEQL+ L NG K+ + I ++ GVD ED+E+
Sbjct: 185 GIYAYRAGFIKQYVQWQPTALEQLESLEQLRALWNGEKIHLDIALETPEVGVDTQEDLER 244
Query: 285 IESFMRER 292
+ + +
Sbjct: 245 VRLILSNK 252
>gi|146311094|ref|YP_001176168.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Enterobacter sp.
638]
gi|166987639|sp|A4W8T7.1|KDSB_ENT38 RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|145317970|gb|ABP60117.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Enterobacter sp.
638]
Length = 248
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 102/243 (41%), Positives = 144/243 (59%), Gaps = 7/243 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPARFAS+R GKPLV+I GKPMI ER++ + D ++VATD E +A + G
Sbjct: 4 VVIIPARFASTRLPGKPLVDINGKPMIVHVLERAR-ESGADRVIVATDHEDVARAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D ++VN+QGDEP+I II V + L
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCGFSDDTVIVNVQGDEPMIPAAIIRQVAENLAQRQVG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF----PYLLHL 225
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ Q +L HL
Sbjct: 123 MATLAVPIHHAEEAFNPNAVKVVMDAEGYALYFSRAAIPWDRDRFAASQEVIGDTFLRHL 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI Y + F++ Y P+PL+ E LEQL+VL G K+ V + + GVD PED+E+
Sbjct: 183 GIYGYRAGFIRRYVTWAPSPLEHIEMLEQLRVLWYGEKIHVAVAQEVPGTGVDTPEDLER 242
Query: 285 IES 287
+ +
Sbjct: 243 VRA 245
>gi|409199832|ref|ZP_11228035.1| CTP:CMP-3-deoxy-D-manno-octulosonate transferase [Pseudoalteromonas
flavipulchra JG1]
Length = 253
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 100/248 (40%), Positives = 151/248 (60%), Gaps = 11/248 (4%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V +IPAR+ASSR GKPL +I GKPMIQR +E++ + + + +ATD + E Q F
Sbjct: 4 VVVIPARYASSRLPGKPLADIGGKPMIQRVYEQA-IQSGAAAVYIATDHSAVFEAAQGFT 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V+MT E ++GTER E +++L + +VVN+QGDEPL+EP+ I V AL DA
Sbjct: 63 DNVLMTREDHQSGTERLAEVVEQLGLNEQTLVVNVQGDEPLLEPDNI-AQVAALLHHSDA 121
Query: 170 VFSTAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVN------PQFPYL 222
+T ++ E+ +PN VK V D A+YFSR IP+ ++ + P +
Sbjct: 122 PMATLCVDVEDVEEVLNPNAVKVVSDIQDNALYFSRSSIPFQRNSMLTLDKNSIPVSHFK 181
Query: 223 LHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAH-GVDAPED 281
H+GI +Y + F++ Y L +PL+++E LEQL+VL +GYK+KV K H GVD PED
Sbjct: 182 RHVGIYAYRAGFIQTYLSLSVSPLEVQESLEQLRVLYHGYKIKVAKAVKPVHAGVDTPED 241
Query: 282 VEKIESFM 289
+ +++ +
Sbjct: 242 LARVQEIL 249
>gi|359459094|ref|ZP_09247657.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Acaryochloris sp.
CCMEE 5410]
Length = 245
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 143/244 (58%), Gaps = 7/244 (2%)
Query: 50 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQF 109
++ +IPAR+ S RF GKPLV + +PM+Q +E +K VVATD +KIA+C + F
Sbjct: 3 ILAVIPARYQSQRFPGKPLVMLDERPMVQWVYEAAKSCDFFQDAVVATDSDKIADCVKGF 62
Query: 110 GADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
G V+MT + GT+R E + D+VVN+QGD+P + PE ++ +V+ +
Sbjct: 63 GGKVVMTRDDHLTGTDRVAE-VAGFYDDMDVVVNVQGDQPFVTPEALEQLVRPYREGERP 121
Query: 170 VFSTAVTSLK-PEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS-GKVNPQFPYLLHLGI 227
+T L ED PN VK + D +G+A+YFSR IPY ++ GKV P HLG+
Sbjct: 122 EMTTLGCPLDMEEDYASPNAVKVLCDRNGHALYFSRSPIPYFRNQGKV----PVYHHLGL 177
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
++ +FL Y L PTP + E LEQL+VLE GY +KV + A ++ PED+ K +
Sbjct: 178 YAFRHDFLMQYSQLEPTPFETCEGLEQLRVLEYGYAIKVCQTQKAAIEINTPEDLVKAQL 237
Query: 288 FMRE 291
F+++
Sbjct: 238 FIQQ 241
>gi|15598175|ref|NP_251669.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
aeruginosa PAO1]
gi|386058048|ref|YP_005974570.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
aeruginosa M18]
gi|416866450|ref|ZP_11915914.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
aeruginosa 138244]
gi|418586454|ref|ZP_13150496.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
aeruginosa MPAO1/P1]
gi|418591009|ref|ZP_13154913.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
aeruginosa MPAO1/P2]
gi|421517508|ref|ZP_15964182.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
aeruginosa PAO579]
gi|25453080|sp|Q9HZM5.1|KDSB_PSEAE RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|9949078|gb|AAG06367.1|AE004723_11 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
aeruginosa PAO1]
gi|334834033|gb|EGM13038.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
aeruginosa 138244]
gi|347304354|gb|AEO74468.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
aeruginosa M18]
gi|375043197|gb|EHS35828.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
aeruginosa MPAO1/P1]
gi|375050250|gb|EHS42733.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
aeruginosa MPAO1/P2]
gi|404346990|gb|EJZ73339.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
aeruginosa PAO579]
gi|453043711|gb|EME91439.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
aeruginosa PA21_ST175]
Length = 254
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 97/246 (39%), Positives = 139/246 (56%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+AS+R GKPL +I G+PMIQR W +++ + +VVATDDE+I CQ FGA+
Sbjct: 8 VIPARYASTRLPGKPLQDIAGQPMIQRVWNQAR-KSAASRVVVATDDERILAACQGFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
++T +GT+R E +L D IVVN+QGDEPLI P +ID V L A P+A
Sbjct: 67 ALLTRAEHNSGTDRLEEVASRLGLASDAIVVNVQGDEPLIPPALIDQVAANLAAHPEAAI 126
Query: 172 STAVTSLKPEDA-FDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ------FPYLLH 224
+T + A F+PN VK D G A+ FSR +P+ + + PY H
Sbjct: 127 ATLAEPIHEVSALFNPNVVKVATDIDGLALTFSRAPLPWARDAFARDRDSLPEGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKV-DHEAHGVDAPEDVE 283
+GI +Y FL + P L+ E LEQL+ L +G ++ V ++ GVD PED+E
Sbjct: 187 IGIYAYRVGFLADFVAWGPCWLENAESLEQLRALWHGVRIHVADARENMLPGVDTPEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRVL 252
>gi|419925670|ref|ZP_14443502.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
541-15]
gi|388385799|gb|EIL47466.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
541-15]
Length = 248
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 102/246 (41%), Positives = 144/246 (58%), Gaps = 7/246 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPAR+AS+R GKPLV+I GKPMI ER++ + D ++VATD E +A + G
Sbjct: 4 VVIIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGADRIIVATDHEDVARAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D ++VN+QGDEP+I II V L
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS----GKVNPQFPYLLHL 225
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ G +L HL
Sbjct: 123 MATLAVPIRNAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAEGLETVGDNFLRHL 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI Y + F++ Y +PL+ E LEQL+VL G K+ V + + GVD PED+E+
Sbjct: 183 GIYGYRAGFIRRYVNWQASPLEHIEMLEQLRVLWYGEKIHVAVAQEVPGTGVDTPEDLER 242
Query: 285 IESFMR 290
+ + MR
Sbjct: 243 VRAEMR 248
>gi|398896892|ref|ZP_10647846.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas sp.
GM55]
gi|398177652|gb|EJM65323.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas sp.
GM55]
Length = 254
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 99/246 (40%), Positives = 145/246 (58%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IP+R+AS+R GKPL+ I GKPMIQ WE++ ++ + +VVATDD +IAE C FGA+
Sbjct: 8 VIPSRYASTRLPGKPLLLIAGKPMIQHVWEQAS-KSSAERVVVATDDARIAEVCNGFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V++T E +GT+R E KL D IVVN+QGDEPLI P +ID V L A +A
Sbjct: 67 VVLTREDHNSGTDRLAEVAMKLGLAADAIVVNVQGDEPLIPPSVIDQVAANLAAHTEARM 126
Query: 172 STAVTSLKPEDA-FDPNRVKCVVDNHGYAIYFSRGLIPYNKSG------KVNPQFPYLLH 224
+T ++ D F+PN VK V D +G A+ FSR +P+ + ++ PY H
Sbjct: 127 ATLAEPIEDVDTLFNPNVVKVVSDLNGLALTFSRSTLPWARDAFAVSREQLPEGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDAPEDVE 283
+GI +Y + FL+ + P L+ E LEQL+ L +G ++ V + GVD ED+E
Sbjct: 187 IGIYAYRAGFLQDFVSWGPCWLENTECLEQLRALWHGVRIHVADALIAPPAGVDTVEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|56552385|ref|YP_163224.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Zymomonas mobilis
subsp. mobilis ZM4]
gi|56543959|gb|AAV90113.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Zymomonas
mobilis subsp. mobilis ZM4]
Length = 266
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 94/260 (36%), Positives = 149/260 (57%), Gaps = 18/260 (6%)
Query: 53 IIPARFASSRFEGKPLVNILG-----KPMIQRTWERSKLATTLDHLVVATDDEKIAECCQ 107
+IPARFAS+R+ GKPLV + G KP+I R+W + +D +VVATDD++IA+ Q
Sbjct: 6 VIPARFASTRYPGKPLVPLAGADGDKKPLIIRSWMAASSVRGVDRVVVATDDQRIADVVQ 65
Query: 108 QFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
+ G D +MT SCRNGTERC L +L YD+++N QGD PL I++ ++ ++ +P
Sbjct: 66 KAGGDALMTPTSCRNGTERCAAVLDQLGDDYDLIINFQGDAPLTPAFIVEKLIDIMKDSP 125
Query: 168 DAVFSTAVTSLKPE---DAFDPNR------VKCVVDNHGYAIYFSRGLIPY-NKSGKVNP 217
+ +T + P FD + V + G A+YFS+ +IP+ +K+ + +P
Sbjct: 126 EYGIATPAVTTSPTVRFQLFDDQKQGLVGGTTVVRNKKGEALYFSKSVIPHLSKADRADP 185
Query: 218 QFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDH---EAH 274
P LH+G+ +Y + L+ Y P+ L+L E LEQL+ L+ G +KV +D E
Sbjct: 186 DLPVFLHIGLYAYRPDTLRQYASRAPSKLELIEGLEQLRFLDEGIAVKVPLIDKPDLELW 245
Query: 275 GVDAPEDVEKIESFMRERNL 294
++ P D + IE+ + R +
Sbjct: 246 ELNNPVDRDLIEATLMARGI 265
>gi|288940750|ref|YP_003442990.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Allochromatium
vinosum DSM 180]
gi|288896122|gb|ADC61958.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Allochromatium
vinosum DSM 180]
Length = 255
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 93/246 (37%), Positives = 148/246 (60%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ S+R GKPL++I GKPMIQR ER++ A+ +VVATDD +I E C++ G
Sbjct: 8 VIPARYGSTRLPGKPLLDIAGKPMIQRVVERAR-ASGAGEVVVATDDRRIREACEKLGIA 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
MT+ S R+G++R E +++ D IVVN+QGDEP + P +I+ V +L A +
Sbjct: 67 TEMTASSHRSGSDRVAEVIERRGWNDDTIVVNLQGDEPCMPPALINQVASSLAARNEIGL 126
Query: 172 STAVTSLKPEDA-FDPNRVKCVVDNHGYAIYFSRGLIPYNKS------GKVNPQFPYLLH 224
+T + FDP+ VK V+D G+A+YFSR IP+++ ++ +L H
Sbjct: 127 ATLAHPIDDSATLFDPHVVKVVIDTAGFALYFSRAPIPWHRDEFLGDKARLPKSVAFLRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVE 283
+G+ +Y + FLK + L P PL++ E LEQL+ L +G + V + + GVD P+D+
Sbjct: 187 IGLYAYRAAFLKRFVTLEPAPLEIAESLEQLRALWHGAPIHVGLAAETPGPGVDTPDDLA 246
Query: 284 KIESFM 289
++ ++
Sbjct: 247 RVVRYL 252
>gi|114562934|ref|YP_750447.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Shewanella
frigidimarina NCIMB 400]
gi|122299935|sp|Q083F6.1|KDSB_SHEFN RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|114334227|gb|ABI71609.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shewanella
frigidimarina NCIMB 400]
Length = 245
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 99/242 (40%), Positives = 140/242 (57%), Gaps = 8/242 (3%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+V +IPAR+ SSRF GKPL I GKPMIQ +ER+ LA LD + VATDD++I + +
Sbjct: 2 KVTLLIPARYGSSRFPGKPLAPINGKPMIQHVYERASLAKGLDSIYVATDDDRIKDAVES 61
Query: 109 FGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
FG V+MTS +GT+R N+A+ L D+V+N+QGD+PLI+P I+ ++ + P
Sbjct: 62 FGGKVVMTSPDAASGTDRINDAIALLGLNDDDLVINLQGDQPLIDPISIEQIISLFERHP 121
Query: 168 DAVFSTAVTSLKPEDAF---DPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLH 224
F A + D DP VK V DN A+YFSR IP+ G+ +P H
Sbjct: 122 -GEFEMATLGFEIVDKRELDDPMHVKMVFDNDHNALYFSRSRIPF---GRDTNDYPVYKH 177
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEK 284
LG+ +Y F+ + L L+ E LEQL+ LE G+K+K+ ++ VD PED+ K
Sbjct: 178 LGVYAYTKRFVNAFAKLPLGRLEDLEKLEQLRALEYGHKIKIAISAFDSPEVDTPEDIRK 237
Query: 285 IE 286
E
Sbjct: 238 CE 239
>gi|399010293|ref|ZP_10712669.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas sp.
GM17]
gi|398107563|gb|EJL97561.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas sp.
GM17]
Length = 254
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 101/246 (41%), Positives = 143/246 (58%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPARFAS+R GKPL I GKPMIQ WE++ + +VVATDD +I E CQ FGA+
Sbjct: 8 VIPARFASTRLPGKPLQMIAGKPMIQHVWEQA-CKSAAQRVVVATDDARIVEACQGFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
++T E +GT+R E +L D IVVN+QGDEPLI P +ID V L A +A
Sbjct: 67 AVLTREDHNSGTDRLAEVASQLGLAADAIVVNVQGDEPLIPPAVIDQVAANLAAHTEASM 126
Query: 172 STAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPY-----NKSGKVNPQ-FPYLLH 224
+T ++ E F+PN VK V D +G A+ FSR +P+ K+ + P+ PY H
Sbjct: 127 ATLAEPIEDVETLFNPNVVKVVSDINGLALTFSRATLPWARDAFAKNRDLLPEGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDAPEDVE 283
+GI +Y + FL + P L+ E LEQL+ L +G ++ V ++ GVD ED+E
Sbjct: 187 IGIYAYRAGFLHDFVSWGPCWLENTESLEQLRALWHGVRIHVADALEAPPGGVDTAEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|157375561|ref|YP_001474161.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Shewanella
sediminis HAW-EB3]
gi|226724339|sp|A8FW10.1|KDSB_SHESH RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|157317935|gb|ABV37033.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shewanella
sediminis HAW-EB3]
Length = 245
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 100/242 (41%), Positives = 141/242 (58%), Gaps = 8/242 (3%)
Query: 50 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQF 109
V +IPAR+ SSRF GKPL I GKPMIQ +ER+ LA L + VATDD++I + + F
Sbjct: 3 VTLLIPARYGSSRFPGKPLAPINGKPMIQHVYERASLAKGLTAIYVATDDDRIKDAVEGF 62
Query: 110 GADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
G V+MTS +GT+R +A+ +L K D+VVN+QGD+PLI+P I+ ++ + P
Sbjct: 63 GGKVVMTSPDAASGTDRIEDAITQLGLKDDDLVVNLQGDQPLIDPISIEQIISLFERHP- 121
Query: 169 AVFSTAVTSLKPEDAF---DPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHL 225
F A + + DP VK V DN A+YFSR IP+ G+ +P HL
Sbjct: 122 GEFGMATLGFEITEKCELDDPKHVKMVFDNEFNALYFSRARIPF---GRDTNDYPVYKHL 178
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKI 285
G+ +Y +F+ + L L+ E LEQL+ LE+GYK+KV ++ VD PED+
Sbjct: 179 GVYAYTRSFISTFAKLPLGRLEDLEKLEQLRALEHGYKIKVAISAFDSPEVDTPEDIRVC 238
Query: 286 ES 287
ES
Sbjct: 239 ES 240
>gi|269102444|ref|ZP_06155141.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Photobacterium
damselae subsp. damselae CIP 102761]
gi|268162342|gb|EEZ40838.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Photobacterium
damselae subsp. damselae CIP 102761]
Length = 248
Score = 174 bits (440), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 103/244 (42%), Positives = 146/244 (59%), Gaps = 9/244 (3%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR+ S+R GKPL +I GKPM+Q +E++ + D ++VATDD+++ + Q FG +
Sbjct: 6 IIPARYQSTRLPGKPLADIGGKPMVQWVYEQA-CKSGADKVIVATDDQRVFDAVQAFGGE 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MT ++GTER E ++K D IVVN+QGDEPLI II V L A +A
Sbjct: 65 VCMTRSDHQSGTERLAEVVEKYNLADDHIVVNVQGDEPLIPDTIIRQVADNL-AHKNAPM 123
Query: 172 STAVTSLKPED-AFDPNRVKCVVDNHGYAIYFSRGLIPYNKS--GKVNPQFPY--LLHLG 226
+T + ED F+PN VK V D GYA+YFSR IP+++ + Q + L H+G
Sbjct: 124 ATLAVEIDHEDEVFNPNAVKVVTDKDGYAMYFSRASIPWDRDHFAQQPAQIHHNLLRHIG 183
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKI 285
I +Y + F+ Y PT L+ E LEQL+VL G K+ V + +D GVD PED+EK+
Sbjct: 184 IYAYRAGFINTYINWQPTALEQIEALEQLRVLWYGEKIHVDVAIDAPPAGVDTPEDLEKV 243
Query: 286 ESFM 289
+ +
Sbjct: 244 RALI 247
>gi|300937737|ref|ZP_07152538.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 21-1]
gi|432679410|ref|ZP_19914804.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE143]
gi|300457244|gb|EFK20737.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 21-1]
gi|431223602|gb|ELF20848.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE143]
Length = 248
Score = 174 bits (440), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 104/248 (41%), Positives = 145/248 (58%), Gaps = 11/248 (4%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPAR+AS+R GKPLV+I GKPMI ER++ + + ++VATD E +A + G
Sbjct: 4 VVIIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGAERIIVATDHEDVARAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D ++VN+QGDEP+I II V L
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSG------KVNPQFPYLL 223
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ V F L
Sbjct: 123 MATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAKDLETVGDNF--LR 180
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDV 282
HLGI Y + F++ Y P+PL+ E LEQL+VL G K+ V + + GVD PED+
Sbjct: 181 HLGIYGYRAGFIRRYVTWQPSPLEHIEMLEQLRVLWYGEKIHVAVAQEVPGTGVDTPEDL 240
Query: 283 EKIESFMR 290
E+I + MR
Sbjct: 241 ERIRAEMR 248
>gi|191166989|ref|ZP_03028812.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
B7A]
gi|300925404|ref|ZP_07141289.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 182-1]
gi|301326632|ref|ZP_07219962.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 78-1]
gi|309795097|ref|ZP_07689517.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 145-7]
gi|415827559|ref|ZP_11514400.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
OK1357]
gi|417595935|ref|ZP_12246594.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
3030-1]
gi|419369233|ref|ZP_13910359.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC14A]
gi|419390375|ref|ZP_13931209.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC15A]
gi|419395534|ref|ZP_13936316.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC15B]
gi|419400890|ref|ZP_13941621.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC15C]
gi|419406101|ref|ZP_13946800.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC15D]
gi|419411568|ref|ZP_13952236.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC15E]
gi|422958910|ref|ZP_16970841.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
H494]
gi|432764240|ref|ZP_19998688.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE48]
gi|450212792|ref|ZP_21894645.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O08]
gi|190902983|gb|EDV62709.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
B7A]
gi|300418474|gb|EFK01785.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 182-1]
gi|300846677|gb|EFK74437.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 78-1]
gi|308121401|gb|EFO58663.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 145-7]
gi|323185376|gb|EFZ70740.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
OK1357]
gi|345358681|gb|EGW90864.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
3030-1]
gi|371595862|gb|EHN84708.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
H494]
gi|378220908|gb|EHX81159.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC14A]
gi|378242678|gb|EHY02630.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC15A]
gi|378250146|gb|EHY10054.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC15B]
gi|378251195|gb|EHY11096.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC15C]
gi|378256942|gb|EHY16787.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC15D]
gi|378260788|gb|EHY20588.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC15E]
gi|431312819|gb|ELG00808.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE48]
gi|449321398|gb|EMD11411.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O08]
Length = 248
Score = 174 bits (440), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 102/246 (41%), Positives = 144/246 (58%), Gaps = 7/246 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPAR+AS+R GKPLV+I GKPMI ER++ + D ++VATD E +A + G
Sbjct: 4 VVIIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGADRIIVATDHEDVARAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D ++VN+QGDEP+I II V L
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS----GKVNPQFPYLLHL 225
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ G +L HL
Sbjct: 123 MATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAEGLETVGDNFLRHL 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI Y + F++ Y +PL+ E LEQL+VL G K+ V + + GVD PED+E+
Sbjct: 183 GIYGYRAGFIRRYVNWQASPLEHIEMLEQLRVLWYGEKIHVAVAQEVPGTGVDTPEDLER 242
Query: 285 IESFMR 290
+ + MR
Sbjct: 243 VRAEMR 248
>gi|417137299|ref|ZP_11981089.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
97.0259]
gi|417307386|ref|ZP_12094255.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
PCN033]
gi|338771018|gb|EGP25769.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
PCN033]
gi|386158863|gb|EIH15196.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
97.0259]
Length = 248
Score = 174 bits (440), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 102/246 (41%), Positives = 144/246 (58%), Gaps = 7/246 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPAR+AS+R GKPLV+I GKPMI ER++ + ++VATD E +A + G
Sbjct: 4 VVIIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGAGRIIVATDHEDVARAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D ++VN+QGDEP+I II V L
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS----GKVNPQFPYLLHL 225
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ G +L HL
Sbjct: 123 MATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAKGLETVGDNFLRHL 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI Y + F++ Y P+PL+ E LEQL+VL G K+ V + + GVD PED+E+
Sbjct: 183 GIYGYRAGFIRRYVNWQPSPLEHIEMLEQLRVLWYGEKIHVAVAQEVPGTGVDTPEDLER 242
Query: 285 IESFMR 290
+ + MR
Sbjct: 243 VRAEMR 248
>gi|145219219|ref|YP_001129928.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlorobium
phaeovibrioides DSM 265]
gi|226724320|sp|A4SD67.1|KDSB_PROVI RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|145205383|gb|ABP36426.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Chlorobium
phaeovibrioides DSM 265]
Length = 247
Score = 174 bits (440), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 96/250 (38%), Positives = 150/250 (60%), Gaps = 7/250 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ V +IPAR SSR E K L ++ G+P+I RTW ++ +T + +VVATD IA ++
Sbjct: 2 KAVILIPARLESSRLERKMLADLEGEPLIVRTWRQAMRSTLAERVVVATDSRDIASVLEE 61
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
GA+V+MTS S GTER EA + +E D+ VN+QGDEPLI P+ ID V+ AA
Sbjct: 62 RGAEVVMTSPSASCGTERIAEAARNIEG--DVFVNLQGDEPLISPDTIDLVLSPFFAADP 119
Query: 169 AVFSTAVTSLKP---EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHL 225
ST V +L+P E DP+ VK ++D G A+YFSR +P+ ++ P + H+
Sbjct: 120 PDCSTLVFALRPDEREQIEDPHIVKALLDRKGNALYFSRSPVPFMRNN--TPSLVFYRHV 177
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKI 285
G+ ++ + L+ + L + L+ E LEQL++LENG+ ++ + + GV+ ED+E +
Sbjct: 178 GMYAFGRDVLQQFAALPVSMLEAAESLEQLRLLENGFSIRCVITTLDQPGVNTAEDLELV 237
Query: 286 ESFMRERNLS 295
S +R+ + S
Sbjct: 238 RSILRKESRS 247
>gi|78188298|ref|YP_378636.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlorobium
chlorochromatii CaD3]
gi|123580413|sp|Q3ATT2.1|KDSB_CHLCH RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|78170497|gb|ABB27593.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Chlorobium
chlorochromatii CaD3]
Length = 248
Score = 174 bits (440), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 95/244 (38%), Positives = 146/244 (59%), Gaps = 7/244 (2%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR S+R K L +I G+P+I RTW ++ +VVATD KIAE +GA+
Sbjct: 6 IIPARLGSTRLPEKMLADIEGEPLIVRTWRQAMQCCRASRVVVATDSVKIAEVLTTYGAE 65
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFS 172
V+MTS R G+ER EA ++ D+VVN+QGDEPLI E ID ++ + S
Sbjct: 66 VVMTSPEARCGSERIAEAARQF--ACDVVVNLQGDEPLISHETIDLALEPFFSPNPPDCS 123
Query: 173 TAVTSLKPED---AFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQS 229
T V L+P+D DPN+VK V++ GYA+YFSR IP+ ++ + Q H+G+ +
Sbjct: 124 TLVFPLQPDDWAQLHDPNQVKVVLNREGYALYFSRSPIPFQRNQLTSTQ--CYRHVGLYA 181
Query: 230 YDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFM 289
+ + L+ + L PT L+ E LEQL++LE+GY+++ + + GV+ ED+E + +
Sbjct: 182 FKAEVLQCFAALPPTMLEEAESLEQLRLLEHGYRIRCMVTHDDQPGVNTAEDLELVRTLF 241
Query: 290 RERN 293
++R+
Sbjct: 242 KQRH 245
>gi|119897763|ref|YP_932976.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Azoarcus sp. BH72]
gi|226724251|sp|A1K5I4.1|KDSB_AZOSB RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|119670176|emb|CAL94089.1| probable 3-deoxy-manno-octulosonate cytidylyltransferase [Azoarcus
sp. BH72]
Length = 257
Score = 174 bits (440), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 100/248 (40%), Positives = 140/248 (56%), Gaps = 12/248 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPARFASSR GKPL +I GKPMI R ER + A + + VATD + + E + G
Sbjct: 7 VIPARFASSRLPGKPLADIAGKPMIVRVLERVQDAGAAE-VWVATDHDGVREAVEAAGGK 65
Query: 113 VIMTSESCRNGTERCNEALQKL-EKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V+MT +GT+R E L + DIVVN+QGDEPLI+P II V L A +A
Sbjct: 66 VVMTRADHPSGTDRLAEVACALGWQDEDIVVNVQGDEPLIDPAIITAVAAELAADGEAAI 125
Query: 172 STAVTSLKPED-AFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNP--------QFPYL 222
+TA + D F+PN VK V D A+YFSR IP+ + P P L
Sbjct: 126 ATAAHPIHDADEVFNPNVVKVVCDARQRALYFSRAPIPWARDAWAQPGERAVLPAGLPVL 185
Query: 223 LHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHE-AHGVDAPED 281
H+G+ +Y +FL+ Y L P P++ E LEQL+ + +GY+++V+ + A GVD ED
Sbjct: 186 RHVGLYAYRVSFLRRYTALAPAPIEQWEALEQLRAMWHGYRIRVLGLQAAPAAGVDTVED 245
Query: 282 VEKIESFM 289
+E++ +
Sbjct: 246 LERVRAVF 253
>gi|300923600|ref|ZP_07139629.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 182-1]
gi|417149542|ref|ZP_11989633.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
1.2264]
gi|417244645|ref|ZP_12038588.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
9.0111]
gi|417614466|ref|ZP_12264922.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
STEC_EH250]
gi|432477292|ref|ZP_19719283.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE208]
gi|432490741|ref|ZP_19732605.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE213]
gi|432840767|ref|ZP_20074227.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE140]
gi|433204666|ref|ZP_20388422.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE95]
gi|300420117|gb|EFK03428.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 182-1]
gi|345360967|gb|EGW93132.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
STEC_EH250]
gi|386161763|gb|EIH23566.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
1.2264]
gi|386210860|gb|EII21331.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
9.0111]
gi|431002931|gb|ELD18423.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE208]
gi|431018789|gb|ELD32219.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE213]
gi|431387397|gb|ELG71221.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE140]
gi|431718103|gb|ELJ82184.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE95]
Length = 246
Score = 174 bits (440), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 90/242 (37%), Positives = 145/242 (59%), Gaps = 5/242 (2%)
Query: 48 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQ 107
S+ V +IPAR+ SSR GKPL++I+GKPMIQ +ER+ + + VATDD+++ + Q
Sbjct: 2 SKAVIVIPARYGSSRLPGKPLLDIVGKPMIQHVYERALQVAGVAEVWVATDDQRVEKAVQ 61
Query: 108 QFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
FG IMT +GT+R E + K+E DI +N+QGDEP+I P ++ +++ ++ P
Sbjct: 62 AFGGKAIMTRNDHESGTDRLVEVMHKVEA--DIYINLQGDEPMIRPRDVETLLQGMRDDP 119
Query: 168 DAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+T ++ E+A +P+ VK VV+ H A+YFSR IPY ++ + + YL H+GI
Sbjct: 120 ALPVATLCHAISAEEAAEPSTVKVVVNTHQDALYFSRSPIPYPRNAE---KARYLKHVGI 176
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
+Y + L+ Y L + + E LEQL+++ G ++ +V GVD P +EK+ +
Sbjct: 177 YAYRRDVLQNYSQLPESMPEQAESLEQLRLMSAGINIRTFEVAATGPGVDTPACLEKVRA 236
Query: 288 FM 289
M
Sbjct: 237 LM 238
>gi|301047602|ref|ZP_07194670.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 185-1]
gi|417143442|ref|ZP_11985670.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
97.0259]
gi|432437706|ref|ZP_19680091.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE188]
gi|432525224|ref|ZP_19762344.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE230]
gi|432570177|ref|ZP_19806684.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE53]
gi|432594147|ref|ZP_19830460.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE60]
gi|433213845|ref|ZP_20397432.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE99]
gi|300300512|gb|EFJ56897.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 185-1]
gi|386154563|gb|EIH10924.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
97.0259]
gi|430961366|gb|ELC79381.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE188]
gi|431049634|gb|ELD59517.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE230]
gi|431098071|gb|ELE03394.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE53]
gi|431126549|gb|ELE28896.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE60]
gi|431733244|gb|ELJ96684.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE99]
Length = 246
Score = 174 bits (440), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 90/242 (37%), Positives = 145/242 (59%), Gaps = 5/242 (2%)
Query: 48 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQ 107
S+ V +IPAR+ SSR GKPL++I+GKPMIQ +ER+ + + VATDD+++ + Q
Sbjct: 2 SKAVIVIPARYGSSRLPGKPLLDIVGKPMIQHVYERALQVAGVAEVWVATDDQRVEKAVQ 61
Query: 108 QFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
FG IMT +GT+R E + K+E DI +N+QGDEP+I P ++ +++ ++ P
Sbjct: 62 AFGGKAIMTRNDHESGTDRLVEVMHKVEA--DIYINLQGDEPMIRPRDVETLLQGMRDDP 119
Query: 168 DAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+T ++ E+A +P+ VK VV+ H A+YFSR IPY ++ + + YL H+GI
Sbjct: 120 ALPVATLCHAISAEEATEPSTVKVVVNTHQDALYFSRSPIPYPRNAE---KARYLKHVGI 176
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
+Y + L+ Y L + + E LEQL+++ G ++ +V GVD P +EK+ +
Sbjct: 177 YAYRRDVLQNYSQLPESMPEQAESLEQLRLMNAGINIRTFEVAATGPGVDTPACLEKVRA 236
Query: 288 FM 289
M
Sbjct: 237 LM 238
>gi|152987929|ref|YP_001347554.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
aeruginosa PA7]
gi|229830641|sp|A6V3B9.1|KDSB_PSEA7 RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|150963087|gb|ABR85112.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas
aeruginosa PA7]
Length = 254
Score = 174 bits (440), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 96/246 (39%), Positives = 140/246 (56%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+AS+R GKPL +I G+PMIQR W +++ + +V+ATDDE+I CQ FGA+
Sbjct: 8 VIPARYASTRLPGKPLQDIAGQPMIQRVWNQAR-KSAASRVVIATDDERILAACQGFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V++T +GT+R E +L D IVVN+QGDEPLI P +ID V L A P++
Sbjct: 67 VLLTRADHNSGTDRLEEVASRLGLAADAIVVNVQGDEPLIPPALIDQVAANLAAHPESAI 126
Query: 172 STAVTSLKPEDA-FDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ------FPYLLH 224
+T + A F+PN VK D +G A+ FSR +P+ + + PY H
Sbjct: 127 ATLAEPIHDVAALFNPNVVKVATDVNGLALTFSRAPLPWARDAFAGDRDSLPDGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKV-DHEAHGVDAPEDVE 283
+GI +Y FL + P L+ E LEQL+ L +G ++ V + GVD PED+E
Sbjct: 187 IGIYAYRVGFLADFVAWGPCWLENTESLEQLRALWHGVRIHVADARETMLPGVDTPEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRVL 252
>gi|422782244|ref|ZP_16835029.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
TW10509]
gi|323976695|gb|EGB71783.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
TW10509]
Length = 248
Score = 174 bits (440), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 103/248 (41%), Positives = 145/248 (58%), Gaps = 11/248 (4%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPAR+AS+R GKPLV+I GKPMI ER++ + + ++VATD E +A + G
Sbjct: 4 VVIIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGAERIIVATDHEDVARAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D ++VN+QGDEP+I II V L
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSG------KVNPQFPYLL 223
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ V F L
Sbjct: 123 MATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAKDLETVGDNF--LR 180
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDV 282
HLGI Y + F++ Y P+PL+ E LEQL+VL G K+ V + + GVD PED+
Sbjct: 181 HLGIYGYRAGFIRRYVNWQPSPLEHIEMLEQLRVLWYGEKIHVAVAQEVPGTGVDTPEDL 240
Query: 283 EKIESFMR 290
E++ + MR
Sbjct: 241 ERVRAEMR 248
>gi|107102528|ref|ZP_01366446.1| hypothetical protein PaerPA_01003592 [Pseudomonas aeruginosa PACS2]
gi|218890822|ref|YP_002439686.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
aeruginosa LESB58]
gi|254235953|ref|ZP_04929276.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
aeruginosa C3719]
gi|254241686|ref|ZP_04935008.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
aeruginosa 2192]
gi|296388528|ref|ZP_06878003.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
aeruginosa PAb1]
gi|313108221|ref|ZP_07794300.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
aeruginosa 39016]
gi|386067010|ref|YP_005982314.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
aeruginosa NCGM2.S1]
gi|392983294|ref|YP_006481881.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
aeruginosa DK2]
gi|416884484|ref|ZP_11922362.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
aeruginosa 152504]
gi|419756450|ref|ZP_14282800.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
aeruginosa PADK2_CF510]
gi|420139195|ref|ZP_14647052.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
aeruginosa CIG1]
gi|421153579|ref|ZP_15613120.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
aeruginosa ATCC 14886]
gi|421159710|ref|ZP_15618823.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
aeruginosa ATCC 25324]
gi|421179860|ref|ZP_15637434.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
aeruginosa E2]
gi|424942347|ref|ZP_18358110.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
aeruginosa NCMG1179]
gi|226724321|sp|B7V149.1|KDSB_PSEA8 RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|126167884|gb|EAZ53395.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
aeruginosa C3719]
gi|126195064|gb|EAZ59127.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
aeruginosa 2192]
gi|218771045|emb|CAW26810.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
aeruginosa LESB58]
gi|310880802|gb|EFQ39396.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
aeruginosa 39016]
gi|334834107|gb|EGM13103.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
aeruginosa 152504]
gi|346058793|dbj|GAA18676.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
aeruginosa NCMG1179]
gi|348035569|dbj|BAK90929.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
aeruginosa NCGM2.S1]
gi|384397181|gb|EIE43594.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
aeruginosa PADK2_CF510]
gi|392318799|gb|AFM64179.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
aeruginosa DK2]
gi|403248065|gb|EJY61664.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
aeruginosa CIG1]
gi|404523421|gb|EKA33844.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
aeruginosa ATCC 14886]
gi|404546438|gb|EKA55492.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
aeruginosa E2]
gi|404546467|gb|EKA55520.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
aeruginosa ATCC 25324]
Length = 254
Score = 174 bits (440), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 97/246 (39%), Positives = 138/246 (56%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+AS+R GKPL +I G+PMIQR W +++ + +VVATDDE+I CQ FGA+
Sbjct: 8 VIPARYASTRLPGKPLQDIAGQPMIQRVWNQAR-KSAASRVVVATDDERILAACQGFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
++T +GT+R E +L D IVVN+QGDEPLI P +ID V L A P+A
Sbjct: 67 ALLTRAEHNSGTDRLEEVASRLGLASDAIVVNVQGDEPLIPPALIDQVAANLAAHPEAAI 126
Query: 172 STAVTSLKPEDA-FDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ------FPYLLH 224
+T + A F+PN VK D G A+ FSR +P+ + + PY H
Sbjct: 127 ATLAEPIHEVSALFNPNVVKVATDIDGLALTFSRAPLPWARDAFARDRDSLPEGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKV-DHEAHGVDAPEDVE 283
+GI +Y FL + P L+ E LEQL+ L +G ++ V + GVD PED+E
Sbjct: 187 IGIYAYRVGFLADFVAWGPCWLENAESLEQLRALWHGVRIHVADARETMLPGVDTPEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRVL 252
>gi|42522383|ref|NP_967763.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bdellovibrio
bacteriovorus HD100]
gi|81618177|sp|Q6MPP1.1|KDSB_BDEBA RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|39574915|emb|CAE78756.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Bdellovibrio
bacteriovorus HD100]
Length = 247
Score = 174 bits (440), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 95/248 (38%), Positives = 144/248 (58%), Gaps = 4/248 (1%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
++VG+IPARF S+RF GKPLVN+ G+P+IQ T E +K + L ++VATD E I +
Sbjct: 2 KIVGVIPARFGSTRFPGKPLVNLKGRPLIQWTVEGAKKSKLLSEVIVATDHEGIKAAAEA 61
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
G V+MT G++R N A++ + D+VVNIQGDEPL+ E+ID + + P
Sbjct: 62 VGVKVVMTDSDLPTGSDRINAAIKDV--ACDVVVNIQGDEPLVTGELIDRLAQVFVDDPK 119
Query: 169 AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK--SGKVNPQFPYLLHLG 226
+T + E+ N VK VV+ A+YFSR +PY++ + + L H+G
Sbjct: 120 MDMATLAHPISAEELQSMNSVKVVVNCRDEALYFSRYPMPYSRMSAQEAGSMDGCLKHIG 179
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIE 286
+ +Y NFLK + P ++ E LEQL+ L G K+KVI+V + GVD PED+ ++E
Sbjct: 180 MYAYSRNFLKQFCEAPPALIEKAESLEQLRALYLGAKIKVIRVKEASVGVDTPEDLARLE 239
Query: 287 SFMRERNL 294
+ + +
Sbjct: 240 KLLSSQGM 247
>gi|332282177|ref|ZP_08394590.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Shigella sp. D9]
gi|332104529|gb|EGJ07875.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Shigella sp. D9]
Length = 248
Score = 173 bits (439), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 101/244 (41%), Positives = 143/244 (58%), Gaps = 7/244 (2%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR+AS+R GKPLV+I GKPMI ER++ + D ++VATD E +A + G +
Sbjct: 6 IIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGADRIIVATDHEDVARAVEAAGGE 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MT ++GTER E ++K D ++VN+QGDEP+I II V L +
Sbjct: 65 VCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVGMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS----GKVNPQFPYLLHLGI 227
+ AV E+AF+PN VK V+D GYA+YFSR IP+++ G +L HLGI
Sbjct: 125 TLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAEGLETVGDNFLRHLGI 184
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKIE 286
Y + F++ Y +PL+ E LEQL+VL G K+ V + + GVD PED+E++
Sbjct: 185 YGYRAGFIRRYVNWQASPLEHIEMLEQLRVLWYGEKIHVAVAQEVPGTGVDTPEDLERVR 244
Query: 287 SFMR 290
+ MR
Sbjct: 245 AEMR 248
>gi|170726533|ref|YP_001760559.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Shewanella woodyi
ATCC 51908]
gi|226724341|sp|B1KDR7.1|KDSB_SHEWM RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|169811880|gb|ACA86464.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shewanella
woodyi ATCC 51908]
Length = 245
Score = 173 bits (439), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 100/242 (41%), Positives = 143/242 (59%), Gaps = 8/242 (3%)
Query: 50 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQF 109
V +IPAR+ SSRF GKPL I GKPMIQ +ER+ LA L + VATDD++I E + F
Sbjct: 3 VTLLIPARYGSSRFPGKPLAPINGKPMIQHVYERASLAKGLTAIYVATDDDRIKEAVEAF 62
Query: 110 GADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
G V+MT +GT+R +A+ +L K D++VN+QGD+PLI+P I+ V+ + P
Sbjct: 63 GGKVVMTDPQAASGTDRIEDAITQLGLKDDDLIVNLQGDQPLIDPISIEQVITLFERHP- 121
Query: 169 AVFSTAVTSLKPEDAF---DPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHL 225
FS A ++ + DP VK V DN+ A+YFSR IP+ G+ +P HL
Sbjct: 122 GEFSMATLGVEITEKAELDDPKHVKMVFDNNFNALYFSRARIPF---GRDTNDYPVYKHL 178
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKI 285
GI +Y +F+ + L L+ E LEQL+ LE+G+K+KV ++ VD PED+
Sbjct: 179 GIYAYTRSFISTFAKLPLGRLEDLEKLEQLRALEHGHKIKVAISAFDSPEVDTPEDIRIC 238
Query: 286 ES 287
E+
Sbjct: 239 EA 240
>gi|359299704|ref|ZP_09185543.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Haemophilus
[parainfluenzae] CCUG 13788]
gi|402306829|ref|ZP_10825864.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Haemophilus
sputorum HK 2154]
gi|400373852|gb|EJP26777.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Haemophilus
sputorum HK 2154]
Length = 251
Score = 173 bits (439), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 98/245 (40%), Positives = 145/245 (59%), Gaps = 9/245 (3%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR+ASSR KPL++I GKPMIQ WE+++ A + +++ATD +I FGA+
Sbjct: 6 IIPARYASSRLPRKPLLDIAGKPMIQHVWEKAQQAGA-NRVIIATDHPEIEAVAHAFGAE 64
Query: 113 VIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS + +GTER E ++K+ +I+VN+QGDEPLI P I+ V + L +
Sbjct: 65 VCMTSTAHNSGTERLAEVIEKMAIANNEIIVNVQGDEPLIPPVIVAQVAENLDKYQVNMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS--GKVNPQF----PYLLHL 225
+ AV E+ F+PN VK + D HG+A+YFSR IP+ + + F YL H+
Sbjct: 125 TLAVKLNTKEELFNPNAVKTLTDQHGFALYFSRAPIPFARDHFADCDDAFVASQNYLRHI 184
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI +Y + F+K Y PT L+ E LEQL+ L G K+ + + + GVD ED+E+
Sbjct: 185 GIYAYRAGFVKQYVAWQPTTLEQLESLEQLRALWYGEKIHLELAKEVPQVGVDTAEDLER 244
Query: 285 IESFM 289
+ + +
Sbjct: 245 VRAIL 249
>gi|375011561|ref|YP_004988549.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Owenweeksia
hongkongensis DSM 17368]
gi|359347485|gb|AEV31904.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Owenweeksia
hongkongensis DSM 17368]
Length = 252
Score = 173 bits (439), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 100/255 (39%), Positives = 147/255 (57%), Gaps = 13/255 (5%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+++GIIP+RF SSR EGKPL +I GKPMIQ +ER++ A T +VVATDDE+I +
Sbjct: 2 KILGIIPSRFGSSRLEGKPLADINGKPMIQWVYERAQEALT--DVVVATDDERIMAAVAK 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDI----VVNIQGDEPLIEPEIIDGVVKAL- 163
FG +MT +GT RC EA + + +I ++NIQGDEPL+EPE++ +
Sbjct: 60 FGGKTVMTGVHHNSGTNRCLEAFEIYNAENNINPEVIINIQGDEPLLEPELLQALASCFD 119
Query: 164 -QAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF--- 219
++ A ++AVTS ED + V +D + A+YFSR IP+ + K
Sbjct: 120 DKSVEMATLASAVTS--NEDLLGDSTVFLTMDKNQDALYFSRSPIPHARGVKKEEWLNHH 177
Query: 220 PYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAP 279
Y H+G+ ++ LK + + + L+ E LEQL+ LE+G K++V K DH VD P
Sbjct: 178 KYWRHIGLYAFTPAALKHFAEMPGSSLEQAEALEQLRWLEDGKKLRVAKTDHSGISVDTP 237
Query: 280 EDVEKIESFMRERNL 294
D+EK+ + E NL
Sbjct: 238 ADLEKVRRIVAEGNL 252
>gi|387771903|ref|ZP_10128060.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Haemophilus
parahaemolyticus HK385]
gi|386908288|gb|EIJ72986.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Haemophilus
parahaemolyticus HK385]
Length = 250
Score = 173 bits (439), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 104/246 (42%), Positives = 144/246 (58%), Gaps = 11/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR+ASSR KPL +I GKPMIQ WE+++ A + +++ATD E+I + + FGA+
Sbjct: 6 IIPARYASSRLPRKPLADIAGKPMIQHVWEKAQQAGA-NRVIIATDHEEIEQVAKTFGAE 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS +GTER E ++K+ D I+VN+QGDEPLI P II V + L +
Sbjct: 65 VCMTSTEHNSGTERLAEVIEKMAIADDEIIVNVQGDEPLIPPVIIQQVAQNLAENQVNMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS--GKVNPQF----PYLLHL 225
+ AV E+ F+PN VK V D G A+YFSR IP+ + N F PYL H+
Sbjct: 125 TLAVKLETKEELFNPNCVKVVTDQKGMALYFSRAAIPFARDHFADCNDAFIASQPYLRHI 184
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAH--GVDAPEDVE 283
GI +Y + F+ Y T L+ E LEQL+ L G K+ V ++ EA GVD ED+E
Sbjct: 185 GIYAYRAKFVNQYIRWQSTVLEKLESLEQLRALWYGEKIHV-ELAKEAPQVGVDTLEDLE 243
Query: 284 KIESFM 289
++ +
Sbjct: 244 RVRQIL 249
>gi|423119526|ref|ZP_17107210.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella oxytoca
10-5246]
gi|376398180|gb|EHT10807.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Klebsiella oxytoca
10-5246]
Length = 248
Score = 173 bits (439), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 102/246 (41%), Positives = 144/246 (58%), Gaps = 7/246 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPARFAS+R GKPL +I GKPMI ER++ + D ++VATD + +A + G
Sbjct: 4 VVIIPARFASTRLPGKPLQDINGKPMIVHVLERAR-ESGADRIIVATDHDDVARAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D I+VNIQGDEP+I P I+ V L A
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCGFSDDTIIVNIQGDEPMIPPAIVRQVADNLAANACG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK----SGKVNPQFPYLLHL 225
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ + L H+
Sbjct: 123 MATLAVPIHDAEEAFNPNAVKVVMDAQGYALYFSRATIPWDRDRFAQSRETIGDTLLRHI 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVD-HEAHGVDAPEDVEK 284
GI Y + F++ Y P+PL+ E LEQL+VL G K+ V + GVD PED+E+
Sbjct: 183 GIYGYRAGFIRRYVSWSPSPLEQIEMLEQLRVLWYGEKIHVAVAEVVPGTGVDTPEDLER 242
Query: 285 IESFMR 290
+ + +R
Sbjct: 243 VRAELR 248
>gi|331646183|ref|ZP_08347286.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
M605]
gi|386618521|ref|YP_006138101.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
NA114]
gi|387828892|ref|YP_003348829.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
SE15]
gi|416335051|ref|ZP_11671762.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
WV_060327]
gi|416896500|ref|ZP_11926347.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
STEC_7v]
gi|417118903|ref|ZP_11969421.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
1.2741]
gi|417661480|ref|ZP_12311061.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
AA86]
gi|422800282|ref|ZP_16848780.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
M863]
gi|432368975|ref|ZP_19612076.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE10]
gi|432396798|ref|ZP_19639583.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE25]
gi|432405730|ref|ZP_19648450.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE28]
gi|432421033|ref|ZP_19663588.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE178]
gi|432464879|ref|ZP_19706984.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE205]
gi|432499179|ref|ZP_19740951.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE216]
gi|432557999|ref|ZP_19794687.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE49]
gi|432582973|ref|ZP_19819383.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE57]
gi|432693666|ref|ZP_19928877.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE162]
gi|432709783|ref|ZP_19944848.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE6]
gi|432722425|ref|ZP_19957348.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE17]
gi|432727013|ref|ZP_19961894.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE18]
gi|432740699|ref|ZP_19975420.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE23]
gi|432893650|ref|ZP_20105662.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE165]
gi|432918136|ref|ZP_20122541.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE173]
gi|432925426|ref|ZP_20127455.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE175]
gi|432980387|ref|ZP_20169165.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE211]
gi|432990012|ref|ZP_20178678.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE217]
gi|433071965|ref|ZP_20258658.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE129]
gi|433095810|ref|ZP_20282020.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE139]
gi|433105031|ref|ZP_20291047.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE148]
gi|433110237|ref|ZP_20296109.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE150]
gi|433119465|ref|ZP_20305170.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE157]
gi|433182452|ref|ZP_20366746.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE85]
gi|281178049|dbj|BAI54379.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
SE15]
gi|320196588|gb|EFW71211.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
WV_060327]
gi|323967165|gb|EGB62589.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
M863]
gi|327253708|gb|EGE65337.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
STEC_7v]
gi|330910698|gb|EGH39208.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
AA86]
gi|331044935|gb|EGI17062.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
M605]
gi|333969022|gb|AEG35827.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
NA114]
gi|386138437|gb|EIG79597.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
1.2741]
gi|430888187|gb|ELC10910.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE10]
gi|430917118|gb|ELC38166.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE25]
gi|430931884|gb|ELC52318.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE28]
gi|430946650|gb|ELC66573.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE178]
gi|430996436|gb|ELD12720.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE205]
gi|431031188|gb|ELD44086.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE216]
gi|431093505|gb|ELD99170.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE49]
gi|431119989|gb|ELE22988.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE57]
gi|431236332|gb|ELF31545.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE162]
gi|431251485|gb|ELF45502.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE6]
gi|431267502|gb|ELF59019.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE17]
gi|431274801|gb|ELF65846.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE18]
gi|431285290|gb|ELF76126.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE23]
gi|431424630|gb|ELH06726.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE165]
gi|431446317|gb|ELH27066.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE173]
gi|431448147|gb|ELH28865.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE175]
gi|431493282|gb|ELH72876.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE211]
gi|431496887|gb|ELH76465.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE217]
gi|431591828|gb|ELI62737.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE129]
gi|431618762|gb|ELI87696.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE139]
gi|431630207|gb|ELI98545.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE150]
gi|431633076|gb|ELJ01358.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE148]
gi|431647784|gb|ELJ15189.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE157]
gi|431710880|gb|ELJ75245.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE85]
Length = 248
Score = 173 bits (439), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 103/248 (41%), Positives = 145/248 (58%), Gaps = 11/248 (4%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPAR+AS+R GKPLV+I GKPMI ER++ + + ++VATD E +A + G
Sbjct: 4 VVIIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGAERIIVATDHEDVARAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D ++VN+QGDEP+I II V L
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSG------KVNPQFPYLL 223
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ V F L
Sbjct: 123 MATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAKDLETVGDNF--LR 180
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDV 282
HLGI Y + F++ Y P+PL+ E LEQL+VL G K+ V + + GVD PED+
Sbjct: 181 HLGIYGYRAGFIRRYVTWQPSPLEHIEMLEQLRVLWYGEKIHVAVAQEVPGTGVDTPEDL 240
Query: 283 EKIESFMR 290
E++ + MR
Sbjct: 241 ERVRAEMR 248
>gi|218962060|ref|YP_001741835.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Candidatus
Cloacamonas acidaminovorans]
gi|167730717|emb|CAO81629.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Candidatus
Cloacamonas acidaminovorans str. Evry]
Length = 253
Score = 173 bits (439), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 88/246 (35%), Positives = 144/246 (58%), Gaps = 3/246 (1%)
Query: 44 KNFRSRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIA 103
K + ++ +IPAR+ S+RF GKPL + GKP+IQ +ER+ + + + VATD+ I
Sbjct: 8 KGSQMNIIALIPARYNSTRFPGKPLALLKGKPIIQYVYERAANSGLFNTVCVATDNISIL 67
Query: 104 ECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKAL 163
E + FG ++T ES +G++R EALQ + ++V N+QGDEPLIE E + ++ A
Sbjct: 68 ETVKSFGGKAVLTKESHPSGSDRIAEALQYFPQA-ELVFNVQGDEPLIEKEPLQKLISAF 126
Query: 164 QAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLL 223
+ + S E ++PN VK V D YA+YFSR +IP+ + +++ Y
Sbjct: 127 EDRKVQMASLMTVIEDREMIYNPNIVKVVTDTQNYALYFSRSVIPFQRDSQID--LKYYR 184
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVE 283
H+G+ +Y L + L P+ L+ E LEQL+ LENG +K+++ ++ G+D P+D++
Sbjct: 185 HIGVYAYSPECLHRFVYLSPSILERTEKLEQLRALENGIPIKMVETSYQGIGIDTPQDLK 244
Query: 284 KIESFM 289
IE +
Sbjct: 245 TIEKLL 250
>gi|116050981|ref|YP_790194.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
aeruginosa UCBPP-PA14]
gi|421166873|ref|ZP_15625094.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
aeruginosa ATCC 700888]
gi|421173823|ref|ZP_15631560.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
aeruginosa CI27]
gi|122260110|sp|Q02PE2.1|KDSB_PSEAB RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|115586202|gb|ABJ12217.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
aeruginosa UCBPP-PA14]
gi|404535347|gb|EKA45048.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
aeruginosa CI27]
gi|404536571|gb|EKA46208.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
aeruginosa ATCC 700888]
Length = 254
Score = 173 bits (439), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 97/246 (39%), Positives = 138/246 (56%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+AS+R GKPL +I G+PMIQR W +++ + +VVATDDE+I CQ FGA+
Sbjct: 8 VIPARYASTRLPGKPLQDIAGQPMIQRVWNQAR-KSAASRVVVATDDERILAACQGFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
++T +GT+R E +L D IVVN+QGDEPLI P +ID V L A P+A
Sbjct: 67 ALLTRAEHNSGTDRLEEVASRLGLASDAIVVNVQGDEPLIPPALIDQVAANLAAHPEAAI 126
Query: 172 STAVTSLKPEDA-FDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ------FPYLLH 224
+T + A F+PN VK D G A+ FSR +P+ + + PY H
Sbjct: 127 ATLAEPIHEVSALFNPNVVKVATDIDGLALTFSRAPLPWARDAFARDRDSLPEGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKV-DHEAHGVDAPEDVE 283
+GI +Y FL + P L+ E LEQL+ L +G ++ V + GVD PED+E
Sbjct: 187 IGIYAYRVGFLADFVAWGPCWLENAESLEQLRALWHGVRIHVADARETMLPGVDTPEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRVL 252
>gi|386286635|ref|ZP_10063823.1| 3-deoxy-manno-octulosonate cytidylyltransferase [gamma
proteobacterium BDW918]
gi|385280432|gb|EIF44356.1| 3-deoxy-manno-octulosonate cytidylyltransferase [gamma
proteobacterium BDW918]
Length = 254
Score = 173 bits (439), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 100/247 (40%), Positives = 144/247 (58%), Gaps = 12/247 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPARFASSR GKPL++I GKPMIQ WER+ + + +V+AT+D+++ + CQ FGA+
Sbjct: 6 IIPARFASSRLPGKPLLDIAGKPMIQHVWERA-VDSDASRVVIATEDQRVFDACQGFGAE 64
Query: 113 VIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
VIMT + +GT+R E + KL+ +IVVN+QGDEPLI I V + L A P A
Sbjct: 65 VIMTLATHESGTDRLQEVVSKLQLSDEEIVVNVQGDEPLIPKAAIAQVAENLAAKPSAGI 124
Query: 172 STAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF------PYLLH 224
+T ++ E F+PN VK V D GYA+YFSR +P+ + + P+L H
Sbjct: 125 ATLGEAINDIEVVFNPNAVKAVADRQGYALYFSRAPMPWCRDDWAGEELSLPDNAPFLRH 184
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIK--VDHEAHGVDAPEDV 282
+GI +Y FL + L+ E LEQL+ +ENG ++ + VD GVD D+
Sbjct: 185 IGIYAYRVGFLHEFVRWPMGVLESFEKLEQLRAMENGVRIHIATACVDIPG-GVDTEADL 243
Query: 283 EKIESFM 289
+ + +
Sbjct: 244 QNVRKIL 250
>gi|402698985|ref|ZP_10846964.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas fragi
A22]
Length = 254
Score = 173 bits (439), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 98/246 (39%), Positives = 144/246 (58%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IP+RFAS+R GKPL+ I GKPM+Q WE++ ++ +VVATDD +I E C+ FGA+
Sbjct: 8 VIPSRFASTRLPGKPLLTIAGKPMVQHVWEQA-CKSSAQRVVVATDDARIVEACKGFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V++T +GT+R E +L D IVVN+QGDEPLI P++ID V L A +A
Sbjct: 67 VLLTRADHESGTDRLAEVATQLGLASDAIVVNVQGDEPLIPPQLIDQVAINLAAHSEASM 126
Query: 172 STAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSG------KVNPQFPYLLH 224
+T + E F+PN VK V D +G A+ FSR +P+ + ++ PY H
Sbjct: 127 ATLAEPITDVETLFNPNVVKVVSDINGLALTFSRATLPWARDDFASHPEQLPAGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKV-DHEAHGVDAPEDVE 283
+GI +Y + FL + P L+ E LEQL+ L +G ++ V V + A GVD ED+E
Sbjct: 187 IGIYAYRAGFLHDFVSWGPCWLENTERLEQLRALWHGVRIHVADVLESPAAGVDTIEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|398968994|ref|ZP_10682641.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas sp.
GM30]
gi|398142901|gb|EJM31788.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas sp.
GM30]
Length = 254
Score = 173 bits (439), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 101/246 (41%), Positives = 146/246 (59%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IP+R+AS+R GKPL+ I GKPMIQ WE++ ++ +VVATDD +I E C+ FGA+
Sbjct: 8 VIPSRYASTRLPGKPLLEIAGKPMIQHVWEQAS-KSSASRVVVATDDVRIVEACKVFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V++T E +GT+R E KL D IVVN+QGDEPLI P +ID V L A +A
Sbjct: 67 VVLTREDHNSGTDRLAEVAAKLGLAPDAIVVNVQGDEPLIPPSVIDQVAANLAAHTEARM 126
Query: 172 STAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPY-----NKSGKVNPQ-FPYLLH 224
+T ++ E F+PN VK V D +G A+ FSR +P+ KS + P+ PY H
Sbjct: 127 ATLAEPIEDVETLFNPNVVKVVSDLNGLALTFSRATLPWARDAFAKSREQLPEGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDAPEDVE 283
+GI +Y + FL+ + P L+ E LEQL+ L +G ++ V + GVD ED+E
Sbjct: 187 IGIYAYRAGFLQDFVSWGPCWLENTESLEQLRALWHGVRIHVADALIAPPTGVDTVEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|410630662|ref|ZP_11341349.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Glaciecola arctica
BSs20135]
gi|410149628|dbj|GAC18216.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Glaciecola arctica
BSs20135]
Length = 252
Score = 173 bits (439), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 106/247 (42%), Positives = 146/247 (59%), Gaps = 20/247 (8%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR+ASSRF GKPLV I GKPM+Q +ER+ + + +++VATDD +IA+ FG
Sbjct: 6 IIPARYASSRFPGKPLVEIQGKPMVQHVYERA-IESGASNILVATDDVRIAKAVDDFGGK 64
Query: 113 VIMTSESCRNGTERCNEA--LQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAV 170
MT +GTER E LQ + +++VVN+QGDEP I E I V + L A
Sbjct: 65 YCMTGAHHESGTERLAEVVDLQNM-LSHELVVNVQGDEPFIPAENILQVAENLHNHQQAE 123
Query: 171 FST-AVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP------YLL 223
+T AV EDAF+PN VK V+D GYA+YFSR IPY+++ ++ Y
Sbjct: 124 MATLAVRITDVEDAFNPNTVKVVMDKQGYAMYFSRSPIPYDRARFLDSDTIDEIGDFYFR 183
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAH-----GVDA 278
H+GI +Y + F+K Y + P+ L+ E LEQL+VL +G K+ V EA G+D
Sbjct: 184 HIGIYAYRAGFIKQYVNMSPSGLEQIESLEQLRVLWHGEKIHV----EEARVAPPIGIDT 239
Query: 279 PEDVEKI 285
PED+ K+
Sbjct: 240 PEDLAKL 246
>gi|254448067|ref|ZP_05061531.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [gamma
proteobacterium HTCC5015]
gi|198262493|gb|EDY86774.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [gamma
proteobacterium HTCC5015]
Length = 265
Score = 173 bits (439), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 105/242 (43%), Positives = 143/242 (59%), Gaps = 7/242 (2%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+AS+RF GKPL +I GKPM+Q WER + +++ATDD++IAE + FGAD
Sbjct: 24 VIPARYASNRFPGKPLEDICGKPMLQHVWERG-CESGAAEVLIATDDDRIAEVAKGFGAD 82
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS S +G++R E K D IVVN+QGDEPL +++ V L DA
Sbjct: 83 VEMTSSSHESGSDRIAEVTTKRGWDDDAIVVNLQGDEPLTPSQLLTQVATDLDLHRDADM 142
Query: 172 STAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPY--NKSGKVNPQFPYLLHLGIQ 228
+T + ED DPN VK V DN GYA+YFSR IPY ++ + P++ L H+GI
Sbjct: 143 TTLCAKIDNYEDLDDPNIVKVVHDNRGYALYFSRASIPYIRDRDPEEPPRYA-LRHIGIY 201
Query: 229 SYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIK-VDHEAHGVDAPEDVEKIES 287
Y + FLK Y + L+ E LEQL+ L +G K+ V V GVD PED+E++
Sbjct: 202 GYRAEFLKRYTSMSMGRLEEIECLEQLRALRHGAKIFVAHAVASPGPGVDVPEDLERVSK 261
Query: 288 FM 289
+
Sbjct: 262 LL 263
>gi|392964853|ref|ZP_10330273.1| 3-deoxy-D-manno-octulosonatecytidylyltransferase [Fibrisoma limi
BUZ 3]
gi|387846236|emb|CCH52319.1| 3-deoxy-D-manno-octulosonatecytidylyltransferase [Fibrisoma limi
BUZ 3]
Length = 253
Score = 173 bits (438), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 97/250 (38%), Positives = 143/250 (57%), Gaps = 20/250 (8%)
Query: 50 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQF 109
++GIIP+R+AS+RF GKPL +I GKPMIQR E+++ H++VATDD++IA ++
Sbjct: 2 IIGIIPSRYASTRFPGKPLADIDGKPMIQRVLEQARQVKAFAHVLVATDDDRIANVVREA 61
Query: 110 GADVIMTSESCRNGTERCNEALQKL-------EKKYDIVVNIQGDEPLIEPEIIDGVVKA 162
G +MT +GT+RC EA +L + ++NIQGDEP I P ID +
Sbjct: 62 GGVAVMTRSDHPSGTDRCWEAYSRLVTDGTVSASPSNYIINIQGDEPYINPAQIDELAAV 121
Query: 163 LQAAPDAVFSTAVTSLKPEDAFD----PNRVKCVVDNHGYAIYFSRGLIPY----NKSGK 214
L D A T + P D+ + PN VK V G A+YFSR IPY +
Sbjct: 122 L----DGTVELA-TQMSPVDSAEVLHSPNEVKITVSGRGEALYFSRQPIPYLRGVDDMSV 176
Query: 215 VNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAH 274
+ + Y H+G+ +Y ++ L+ L P+ L+ E LEQL+ LE GY++K++ +++
Sbjct: 177 WHERHAYHRHIGLYAYRADILEQITQLPPSSLEKAESLEQLRWLEAGYRIKLVPTRYQSQ 236
Query: 275 GVDAPEDVEK 284
VDAP DVEK
Sbjct: 237 SVDAPADVEK 246
>gi|94309478|ref|YP_582688.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Cupriavidus
metallidurans CH34]
gi|93353330|gb|ABF07419.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Cupriavidus
metallidurans CH34]
Length = 269
Score = 173 bits (438), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 99/252 (39%), Positives = 144/252 (57%), Gaps = 17/252 (6%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR AS+R KPL +I G PMI R ER+ A++ VVATD +++A+ C G +
Sbjct: 9 VIPARLASTRLPNKPLADIGGHPMIVRVAERAH-ASSAQRTVVATDSQEVAQACAAHGVE 67
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
++T ++GT+R +E +L D IVVN+QGDEPLIEP +ID V L A D
Sbjct: 68 AVLTRADHQSGTDRLSEVAAQLGLADDAIVVNVQGDEPLIEPTLIDEVALHLAAHTDCAI 127
Query: 172 STAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK------------SGKVN-P 217
+TA L + F+PN VK V DN G A+YFSR IP+ + + +V P
Sbjct: 128 ATAAHPLDDVAEVFNPNVVKVVCDNAGRALYFSRAPIPWARDAWSAVPAQPAATAQVPLP 187
Query: 218 QFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGV 276
P L H+GI +Y + FL+ +P L P++ E LEQL+ + +G ++ V + A GV
Sbjct: 188 AMPVLRHIGIYAYRAGFLRRFPTLAVAPVEQTEALEQLRAMWHGERIGVMVTAAAPAPGV 247
Query: 277 DAPEDVEKIESF 288
D P D+E++ +
Sbjct: 248 DTPADLERVRAL 259
>gi|374386867|ref|ZP_09644364.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Odoribacter
laneus YIT 12061]
gi|373223428|gb|EHP45778.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Odoribacter
laneus YIT 12061]
Length = 249
Score = 173 bits (438), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 99/243 (40%), Positives = 138/243 (56%), Gaps = 9/243 (3%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+++ IIPAR+AS+RF GKPL I GKP+IQ E++ A + VATDD++I
Sbjct: 2 KLLIIIPARYASTRFPGKPLAEIGGKPVIQHVVEKA--AKVSSDVFVATDDDRIYRKVMA 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKL----EKKYDIVVNIQGDEPLIEPEIIDGVVKALQ 164
FG +MT+ + R+GT+RC EA K+ + YD+V+NIQGDEP I PE I + +
Sbjct: 60 FGGRAVMTAVAHRSGTDRCFEAYCKIVSERDLSYDVVINIQGDEPFILPEQIRALANCFE 119
Query: 165 AAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF---PY 221
+ + A D FDPN+VK V G A+YFSR IPY + + F +
Sbjct: 120 DPEIQIATLAKQFDNNTDIFDPNKVKVVFSGDGKALYFSRSPIPYCRGVETQDWFAETAF 179
Query: 222 LLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPED 281
H+G+ +Y LK L P L+ E LEQL+ LENGY + V +HE+ G+D P D
Sbjct: 180 YKHVGMYAYRPEVLKEITALLPGRLEKAESLEQLRWLENGYHIAVKITEHESIGIDTPAD 239
Query: 282 VEK 284
+EK
Sbjct: 240 LEK 242
>gi|89075810|ref|ZP_01162194.1| putative 3-deoxy-manno-octulosonate cytidylyltransferase
[Photobacterium sp. SKA34]
gi|89048431|gb|EAR54007.1| putative 3-deoxy-manno-octulosonate cytidylyltransferase
[Photobacterium sp. SKA34]
Length = 248
Score = 173 bits (438), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 100/244 (40%), Positives = 145/244 (59%), Gaps = 9/244 (3%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR+ S+R GKPL +I GKPM+Q +E++ + + D ++VATDD++I + + FG +
Sbjct: 6 IIPARYQSTRLPGKPLADIAGKPMVQWVYEKA-MKSGADQVIVATDDQRIVDVVKGFGGE 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V +T +GTER E ++K + D IVVN+QGDEPLI II V + A DA
Sbjct: 65 VCLTRTDHESGTERLAEVVEKYQLSDDHIVVNVQGDEPLIPDTIIRQVADNI-AHKDAPM 123
Query: 172 STAVTSLKPED-AFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKV-NPQFPY---LLHLG 226
+T + D F+PN VK V D GYA+YFSR IP+++ P+ + L H+G
Sbjct: 124 ATLAVEIDHYDEVFNPNAVKVVTDKDGYALYFSRAAIPWDRDNFAKQPRIVHHNLLRHIG 183
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKI 285
I +Y + F+K Y P+ L+ E LEQL+VL G K+ V + +D GVD PED+E +
Sbjct: 184 IYAYRAGFIKTYINWEPSALEQIESLEQLRVLWYGEKIHVDVAIDAPPAGVDTPEDLETV 243
Query: 286 ESFM 289
+
Sbjct: 244 RQIV 247
>gi|392421835|ref|YP_006458439.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
stutzeri CCUG 29243]
gi|390984023|gb|AFM34016.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
stutzeri CCUG 29243]
Length = 254
Score = 173 bits (438), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 99/246 (40%), Positives = 140/246 (56%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+AS+R GKPL +I GKPM+Q WE++ +T V+ATDD +I + C FGA
Sbjct: 8 VIPARYASTRLPGKPLQDIAGKPMVQHVWEQAS-KSTAQRAVIATDDSRIVDACSAFGAQ 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V++T +GT+R E ++L D IVVN+QGDEPLI P +ID V L A P+A
Sbjct: 67 VVLTRPDHNSGTDRLAEVCEQLGLPSDAIVVNVQGDEPLIPPAVIDQVAANLAAHPEAAI 126
Query: 172 STAVTSLKPEDA-FDPNRVKCVVDNHGYAIYFSRGLIPYNKSG-----KVNP-QFPYLLH 224
+T L A F+PN VK + D +G A+ FSR +P+ + V P PY H
Sbjct: 127 ATLAEPLSDVQALFNPNVVKVLSDTNGLALTFSRAPLPWARDAFAADRSVLPVGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDAPEDVE 283
+GI +Y + FL + P L+ E LEQL+ L +G ++ V V GVD ED+E
Sbjct: 187 IGIYAYRAGFLADFVSWGPCWLEDTECLEQLRALWHGQRIHVADAVQAPPAGVDTAEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|358447653|ref|ZP_09158170.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Marinobacter
manganoxydans MnI7-9]
gi|357228156|gb|EHJ06604.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Marinobacter
manganoxydans MnI7-9]
Length = 264
Score = 173 bits (438), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 101/256 (39%), Positives = 146/256 (57%), Gaps = 16/256 (6%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ASSR GKPL +I GKPMIQ ER+ + D +VVATDD++I C+ FGA+
Sbjct: 6 VIPARYASSRLPGKPLADIAGKPMIQHVCERAA-ESRADRVVVATDDDRIRTACEGFGAE 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V+MTS + +GT+R E + L D VVN+QGDEPLI PE+I+ V L+ P+
Sbjct: 65 VVMTSLNHASGTDRLEEVARVLGFGPDHRVVNVQGDEPLIPPELINQVADNLEFYPEVAI 124
Query: 172 STAVTSLK-PEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS--------GKVNPQFP-- 220
+T + PE F+PN VK V D+ G A YFSR IP+ + ++ P
Sbjct: 125 ATLCERIHDPEHVFNPNVVKVVFDHRGIAHYFSRAPIPWARDQWQEGTPLTGLDAALPDN 184
Query: 221 --YLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVD 277
Y H+GI Y ++ L + P P ++ E LEQL+ L NG ++ V + + GVD
Sbjct: 185 VGYFRHIGIYGYRASVLAEFVSWAPAPTEVTESLEQLRALYNGARIHVDVAAVNPPGGVD 244
Query: 278 APEDVEKIESFMRERN 293
D+ ++ ++ +RN
Sbjct: 245 TDADLHRVRGWLEKRN 260
>gi|429121362|ref|ZP_19181998.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Cronobacter
sakazakii 680]
gi|426324206|emb|CCK12735.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Cronobacter
sakazakii 680]
Length = 248
Score = 173 bits (438), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 100/246 (40%), Positives = 147/246 (59%), Gaps = 7/246 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPAR+AS+R GKPLV+I GKPMI ER++ + ++VATD +A + G
Sbjct: 4 VVIIPARYASTRLPGKPLVDINGKPMIIHVLERAR-ESGAARIIVATDHPDVARAIEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D ++VN+QGDEP+I P II V + L +A
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCGFADDTVIVNVQGDEPMIPPAIIRQVAENLASAQAG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP----YLLHL 225
+ + AV ++AF+PN VK V+D GYA+YFSR IP+++ + +L H+
Sbjct: 123 MATLAVPVHDAQEAFNPNAVKVVMDAQGYALYFSRATIPWDRDRFAQSRDTIGDSFLRHI 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI Y + F++ Y +PL+ E LEQL+VL +G K+ V + V GVD PED+E+
Sbjct: 183 GIYGYRAGFIRRYVTWPASPLEQIEMLEQLRVLWHGEKIHVAVAVVVPGTGVDTPEDLER 242
Query: 285 IESFMR 290
+ + MR
Sbjct: 243 VRAEMR 248
>gi|410636841|ref|ZP_11347432.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Glaciecola
lipolytica E3]
gi|410143647|dbj|GAC14637.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Glaciecola
lipolytica E3]
Length = 254
Score = 173 bits (438), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 103/242 (42%), Positives = 144/242 (59%), Gaps = 10/242 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR+AS+RF GKPLV I GKPM+Q +ER+ L ++VATDD +IA+ FG +
Sbjct: 6 IIPARYASTRFPGKPLVEISGKPMVQHVYERA-LEAGATRVIVATDDARIAKTVTDFGGN 64
Query: 113 VIMTSESCRNGTERCNEALQ-KLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
MT+ +GTER E + + +++VVN+QGDEP I I V + L DA
Sbjct: 65 YCMTAAHHESGTERLAEVVDVEGLLAHELVVNVQGDEPFIPAANIRQVAENLFQYKDAEM 124
Query: 172 ST-AVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP------YLLH 224
+T V EDAF+PN VK V D GYA+YFSR IPY++S ++ YL H
Sbjct: 125 ATLGVRISDVEDAFNPNVVKVVTDKMGYALYFSRSAIPYDRSRFMDADSIDEIGDFYLRH 184
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHE-AHGVDAPEDVE 283
+GI +Y + F+K Y + P+ L+ E LEQL+VL +G ++ V + G+D PED+E
Sbjct: 185 IGIYAYRAGFIKQYVNMAPSGLEQIESLEQLRVLWHGERIHVDEAQKAPPTGIDTPEDLE 244
Query: 284 KI 285
K+
Sbjct: 245 KL 246
>gi|419699774|ref|ZP_14227386.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
SCI-07]
gi|422378894|ref|ZP_16459097.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 57-2]
gi|432731631|ref|ZP_19966467.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE45]
gi|432758709|ref|ZP_19993209.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE46]
gi|324009861|gb|EGB79080.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 57-2]
gi|380348880|gb|EIA37156.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
SCI-07]
gi|431277886|gb|ELF68890.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE45]
gi|431310648|gb|ELF98829.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE46]
Length = 248
Score = 173 bits (438), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 102/248 (41%), Positives = 146/248 (58%), Gaps = 11/248 (4%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPAR+AS+R GKPLV+I GKPMI ER++ + + ++VATD E +A + G
Sbjct: 4 VVIIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGAERIIVATDHEDVARAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D ++VN+QGDEP+I II V L
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSG------KVNPQFPYLL 223
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ V F L
Sbjct: 123 MATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAKDLETVGDNF--LR 180
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDV 282
HLGI Y + F++ Y P+PL+ E LEQL+VL G K+ V + ++ GVD PED+
Sbjct: 181 HLGIYGYRAGFIRRYVTWQPSPLEHIEMLEQLRVLWYGEKIHVAVALEVPGTGVDTPEDL 240
Query: 283 EKIESFMR 290
+++ + MR
Sbjct: 241 KRVRAEMR 248
>gi|365539647|ref|ZP_09364822.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio ordalii
ATCC 33509]
Length = 250
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 101/247 (40%), Positives = 144/247 (58%), Gaps = 9/247 (3%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ S+R GKPL +I GKPMIQ +E++ L + + +V+ATDD ++ FG +
Sbjct: 6 VIPARYQSTRLPGKPLADIGGKPMIQWVYEQA-LQSGAEQVVIATDDARVEAAVHAFGGN 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS +GTER E ++ + D I+VN+QGDEPLI P II V L + +
Sbjct: 65 VCMTSSHHESGTERLAEVVKLMGIADDHIIVNVQGDEPLIPPIIIKQVANNLANSSAPMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK----SGKVNPQFPYLLHLGI 227
+ AV + F+PN VK V D GYA+YFSR IP+++ +G P L H+GI
Sbjct: 125 TLAVEITDQAEVFNPNAVKVVTDQEGYALYFSRATIPWDRDHFAAGGQTVIQPVLRHIGI 184
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEA--HGVDAPEDVEKI 285
+Y + F+ Y P+ L+ E LEQL+VL G K+ V V EA GVD PED+E +
Sbjct: 185 YAYRAGFINTYINWQPSVLEKIECLEQLRVLWYGEKIHV-AVAKEAPPAGVDTPEDLELV 243
Query: 286 ESFMRER 292
+ + +R
Sbjct: 244 RAIVSQR 250
>gi|337288627|ref|YP_004628099.1| 3-deoxy-manno-octulosonate cytidylyltransferase
[Thermodesulfobacterium sp. OPB45]
gi|334902365|gb|AEH23171.1| 3-deoxy-manno-octulosonate cytidylyltransferase
[Thermodesulfobacterium geofontis OPF15]
Length = 245
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 103/245 (42%), Positives = 142/245 (57%), Gaps = 5/245 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
R V IIPAR+ S+RF GKPL + GK +I+ +ER+ LA+ ++ + VATDDE+I
Sbjct: 2 RKVIIIPARYGSTRFPGKPLALLWGKTIIRHVYERA-LASEIEEIYVATDDERIFNEVIS 60
Query: 109 FGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
FG I+TS+ GTER EA+ L + D+++N+Q D+PL E ++K L +
Sbjct: 61 FGGKAILTSKEHTCGTERVAEAVNILGLDEEDLIINLQADQPLFPSEYFSLLIKPLLFSS 120
Query: 168 DAVFSTAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLG 226
D ST T +K +D +PNRVK V+D G A+YFSR IPY P YL H+G
Sbjct: 121 DIHMSTLATPIKNLKDLENPNRVKVVLDKEGRALYFSRSSIPYFVPSGKEPL--YLKHIG 178
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIE 286
+ +Y FL + L P L+ E LEQL+ LE GYK+ V V E VD PED+E I+
Sbjct: 179 VYAYTKGFLDKFISLPPGDLEASEKLEQLRALEYGYKIAVTVVPKEVPEVDTPEDLEYIK 238
Query: 287 SFMRE 291
+ E
Sbjct: 239 TLKEE 243
>gi|189461389|ref|ZP_03010174.1| hypothetical protein BACCOP_02044 [Bacteroides coprocola DSM 17136]
gi|189431918|gb|EDV00903.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Bacteroides
coprocola DSM 17136]
Length = 253
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 99/250 (39%), Positives = 145/250 (58%), Gaps = 10/250 (4%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR+AS+RF KPL + GK +IQR +E +++ LD VA DDE+I +
Sbjct: 2 KFIGIIPARYASTRFPAKPLAMLGGKTVIQRVYE--QVSGILDEAYVAIDDERIESAVKA 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG V+MTS + ++GT+RC EA K+ YD++VNIQGDEP I+ ++ VKA
Sbjct: 60 FGGKVVMTSVNHKSGTDRCYEAYCKVGSGYDVIVNIQGDEPFIQRSQLEA-VKACFNDES 118
Query: 169 AVFSTAVTSLKPEDAFDP----NRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF---PY 221
+T V +D F+ N K VVD + A+YFSR +IPY ++ + Y
Sbjct: 119 TQIATLVKPFTVDDGFEALENVNSPKVVVDKNMNALYFSRSIIPYQRNKEKAEWLQGHTY 178
Query: 222 LLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPED 281
H+G+ +Y + LK L + L+ E LEQL+ LENGY +KV + E G+D P+D
Sbjct: 179 YKHIGLYAYRAAVLKEITALPQSSLEQAESLEQLRWLENGYTIKVGISEVETIGIDTPQD 238
Query: 282 VEKIESFMRE 291
+ + E F+ E
Sbjct: 239 LARAEKFLLE 248
>gi|300722542|ref|YP_003711832.1| CTP:CMP-3-deoxy-D-manno-octulosonate transferase [Xenorhabdus
nematophila ATCC 19061]
gi|297629049|emb|CBJ89634.1| CTP:CMP-3-deoxy-D-manno-octulosonate transferase [Xenorhabdus
nematophila ATCC 19061]
Length = 249
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 102/245 (41%), Positives = 145/245 (59%), Gaps = 7/245 (2%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPARFAS+R GKPL +I GKPMI R ER+ + + + ++VATD++ + + G +
Sbjct: 5 IIPARFASTRLPGKPLADIHGKPMIVRVMERA-VRSGANRVIVATDNQNVFDAVIAAGGE 63
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTSE+ +GTER E + K + D I+VN+QGDEPLI +II V L + +
Sbjct: 64 VCMTSENHHSGTERLAEVIDKYQFSDDEIIVNVQGDEPLIPEQIIKQVADNLAGSDAGMA 123
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF----PYLLHLGI 227
+ AV E+AF+PN VK V+D GYA+YFSR IP+ + + + +L H+GI
Sbjct: 124 TLAVQIQDAEEAFNPNAVKVVMDAKGYALYFSRAPIPWERDRFMQSKEMIGDNFLRHIGI 183
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIK-VDHEAHGVDAPEDVEKIE 286
+Y + F++ Y P PL+ E LEQL+VL G K+ V K + GVD PED+E +
Sbjct: 184 YAYRAGFIRRYVKWAPGPLENIEMLEQLRVLWYGEKIHVAKALQAPGAGVDTPEDLEVVR 243
Query: 287 SFMRE 291
E
Sbjct: 244 KVFVE 248
>gi|158335349|ref|YP_001516521.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Acaryochloris
marina MBIC11017]
gi|229830635|sp|B0BZZ7.1|KDSB_ACAM1 RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|158305590|gb|ABW27207.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Acaryochloris
marina MBIC11017]
Length = 245
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 93/243 (38%), Positives = 141/243 (58%), Gaps = 5/243 (2%)
Query: 50 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQF 109
++ +IPAR+ S RF GKPLV + +PM+Q +E +K VVATD +KIA+C + F
Sbjct: 3 ILAVIPARYQSQRFPGKPLVMLDERPMVQWVYEAAKSCDFFQDAVVATDSDKIADCVKGF 62
Query: 110 GADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
G V+MT + GT+R E + D+VVN+QGD+P + PE ++ +V+ +
Sbjct: 63 GGKVVMTRDDHLTGTDRVAE-VAGFYDDMDVVVNVQGDQPFVTPEALEQLVRPYREGERP 121
Query: 170 VFSTAVTSLK-PEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQ 228
+T L ED PN VK + D +G+A+YFSR IPY ++ P + HLG+
Sbjct: 122 EMTTLGCPLDMDEDYASPNAVKVLCDRNGHALYFSRSPIPYFRTQGTVPVY---HHLGLY 178
Query: 229 SYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESF 288
++ +FL Y L PTP + E LEQL+VLE GY +KV + A ++ PED+ K + F
Sbjct: 179 AFRHDFLMQYSQLEPTPFETCEGLEQLRVLEYGYAIKVCQTQKAAIEINTPEDLVKAQLF 238
Query: 289 MRE 291
+++
Sbjct: 239 IQQ 241
>gi|399004305|ref|ZP_10706935.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas sp.
GM18]
gi|398119865|gb|EJM09539.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas sp.
GM18]
Length = 254
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 101/246 (41%), Positives = 146/246 (59%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IP+R+AS+R GKPL+ I GKPMIQ WE++ ++ +VVATDD +I E C+ FGA+
Sbjct: 8 VIPSRYASTRLPGKPLLLIAGKPMIQHAWEQAS-KSSAQRVVVATDDARIVEACKGFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V++T E +GT+R E KL D IVVN+QGDEPLI P +ID V L A +A
Sbjct: 67 VVLTREDHNSGTDRLAEVAAKLGLAPDAIVVNVQGDEPLIPPSVIDQVAANLAAHTEARM 126
Query: 172 STAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPY-----NKSGKVNPQ-FPYLLH 224
+T ++ E F+PN VK V D +G A+ FSR +P+ KS + P+ PY H
Sbjct: 127 ATLAEPIEDVETLFNPNVVKVVSDLNGLALTFSRATLPWARDAFAKSREQLPEGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDAPEDVE 283
+GI +Y + FL+ + P L+ E LEQL+ L +G ++ V + GVD ED+E
Sbjct: 187 IGIYAYRAGFLQDFVTWGPCWLENTESLEQLRALWHGVRIHVADALIAPPTGVDTVEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|345870207|ref|ZP_08822161.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Thiorhodococcus
drewsii AZ1]
gi|343922149|gb|EGV32854.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Thiorhodococcus
drewsii AZ1]
Length = 255
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 96/246 (39%), Positives = 149/246 (60%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ S+R GKPLV+I GKPMIQ ER+ L + D +VVATDD++IA+ C G
Sbjct: 8 VIPARYGSTRLPGKPLVDIKGKPMIQHVVERA-LDSAADEIVVATDDQRIADVCVPLGVR 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V++T + R+GT+R E + + E D IVVN+QGDEP + ++D V L +
Sbjct: 67 VVLTEVAHRSGTDRVAEVITRCEWSDDTIVVNLQGDEPCMPVALLDQVAHNLASLDKTGM 126
Query: 172 STAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYN------KSGKVNPQFPYLLH 224
+T ++ + FDP+ VK V + G+A+YFSR IP++ K + +L H
Sbjct: 127 ATLAYPIRDGAELFDPHLVKVVTNVAGFALYFSRAPIPWHRDEFLGKHAALPSSVGFLRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVE 283
+G+ +Y + FLK Y L P+PL+L E LEQL+VL +G ++ V + V+ GVD +D+
Sbjct: 187 IGLYAYRAAFLKRYIHLDPSPLELAESLEQLRVLWHGERIHVGLAVEEPGPGVDTSDDLA 246
Query: 284 KIESFM 289
++ +++
Sbjct: 247 RVAAYL 252
>gi|365969802|ref|YP_004951363.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Enterobacter
cloacae EcWSU1]
gi|365748715|gb|AEW72942.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Enterobacter
cloacae EcWSU1]
Length = 248
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 101/246 (41%), Positives = 146/246 (59%), Gaps = 7/246 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPAR+AS+R GKPLV+I GKPMI ER++ + + ++VATD +A + G
Sbjct: 4 VVIIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGAERVIVATDHPDVARAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D ++VN+QGDEP+I II V + L
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCGFSDDTVIVNVQGDEPMIPAVIIRQVAENLAQRQVG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS----GKVNPQFPYLLHL 225
+ + AV L E+AF+PN VK V+D GYA+YFSR IP+++ K +L HL
Sbjct: 123 MATLAVPVLHAEEAFNPNAVKVVMDAEGYALYFSRATIPWDRDRFAVSKETIGDSFLRHL 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI Y + F++ Y P+PL+ E LEQL+VL G K+ V + + GVD PED+E+
Sbjct: 183 GIYGYRAGFIRRYVTWAPSPLEHIEMLEQLRVLWYGEKIHVAVAQEVPGTGVDTPEDLER 242
Query: 285 IESFMR 290
+ + +R
Sbjct: 243 VRAELR 248
>gi|398841808|ref|ZP_10599016.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas sp.
GM102]
gi|398107465|gb|EJL97464.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas sp.
GM102]
Length = 254
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 101/246 (41%), Positives = 145/246 (58%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IP+R+AS+R GKPL+ I GKPMIQ WE++ ++ +VVATDD +I E C+ FGAD
Sbjct: 8 VIPSRYASTRLPGKPLLLIAGKPMIQHVWEQAS-KSSAQRVVVATDDARIVEACKSFGAD 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V++T E +GT+R E KL D IVVN+QGDEPLI P +ID V L +A
Sbjct: 67 VVLTREDHNSGTDRLAEVAAKLGLAPDAIVVNVQGDEPLIPPSVIDQVAANLAVHTEARM 126
Query: 172 STAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPY-----NKSGKVNPQ-FPYLLH 224
+T ++ E F+PN VK V D +G A+ FSR +P+ KS + P+ PY H
Sbjct: 127 ATLAEPIEDVETLFNPNVVKVVSDLNGLALTFSRATLPWARDAFAKSREQLPEGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDAPEDVE 283
+GI +Y + FL+ + P L+ E LEQL+ L +G ++ V + GVD ED+E
Sbjct: 187 IGIYAYRAGFLQDFVTWGPCWLENTEALEQLRALWHGVRIHVADALIAPPTGVDTIEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|260753936|ref|YP_003226829.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Zymomonas mobilis
subsp. mobilis NCIMB 11163]
gi|258553299|gb|ACV76245.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Zymomonas
mobilis subsp. mobilis NCIMB 11163]
Length = 266
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 93/260 (35%), Positives = 149/260 (57%), Gaps = 18/260 (6%)
Query: 53 IIPARFASSRFEGKPLVNILG-----KPMIQRTWERSKLATTLDHLVVATDDEKIAECCQ 107
+IPARFAS+R+ GKPLV + G KP+I R+W + +D +VVATDD++IA+ Q
Sbjct: 6 VIPARFASTRYPGKPLVPLAGADGDKKPLIIRSWMAASTVRGVDRVVVATDDQRIADVVQ 65
Query: 108 QFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
+ G + +MT SCRNGTERC L +L YD+++N QGD PL I++ ++ ++ +P
Sbjct: 66 KAGGEALMTPTSCRNGTERCAAVLDQLGDDYDLIINFQGDAPLTPAFIVEKLIDIMKDSP 125
Query: 168 DAVFSTAVTSLKPE---DAFDPNR------VKCVVDNHGYAIYFSRGLIPY-NKSGKVNP 217
+ +T + P FD + V + G A+YFS+ +IP+ +K+ + +P
Sbjct: 126 EYGIATPAVTTSPTVRFQLFDDQKQGLVGGTTVVRNKKGEALYFSKSVIPHLSKADRADP 185
Query: 218 QFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDH---EAH 274
P LH+G+ +Y + L+ Y P+ L+L E LEQL+ L+ G +KV +D E
Sbjct: 186 DLPVFLHIGLYAYRPDTLRQYASRAPSKLELIEGLEQLRFLDEGIAVKVPLIDKPDLELW 245
Query: 275 GVDAPEDVEKIESFMRERNL 294
++ P D + IE+ + R +
Sbjct: 246 ELNNPVDRDLIEATLMARGI 265
>gi|330830189|ref|YP_004393141.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Aeromonas
veronii B565]
gi|328805325|gb|AEB50524.1| 3-deoxy-manno-octulosonate cytidylyltransferase synthetase
[Aeromonas veronii B565]
Length = 249
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 102/245 (41%), Positives = 147/245 (60%), Gaps = 7/245 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V +IPAR+AS+R GKPL +I GKPM+Q E++ L + D ++VATDDE++ + G
Sbjct: 4 VVVIPARYASTRLPGKPLADIHGKPMVQHVVEKA-LQSGADRVIVATDDERVQQALLSTG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MTS ++GTER E + D I+VN+QGDEPLI P II V L AA
Sbjct: 63 VEVCMTSPDHQSGTERLAEVCRHYGFAADTIIVNVQGDEPLIPPAIIRQVADNLAAATAP 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS--GKVNPQF--PYLLHL 225
+ + +V E+AF+PN VK V D GYA+YFSR IP+++ K + Q Y H+
Sbjct: 123 MATLSVPIKDAEEAFNPNAVKVVTDEDGYALYFSRASIPWDRDRFAKSHEQIGDHYQRHI 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIK-VDHEAHGVDAPEDVEK 284
GI +Y + F++ Y P+ L+ E LEQL+VL G K+ V + ++ GVD D+EK
Sbjct: 183 GIYAYRAGFIQRYVDWAPSVLEQIEALEQLRVLWYGEKIHVAQALEAPPVGVDTQADLEK 242
Query: 285 IESFM 289
+ +F+
Sbjct: 243 VRAFL 247
>gi|331672454|ref|ZP_08373244.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
TA280]
gi|331070360|gb|EGI41725.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
TA280]
Length = 248
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 101/246 (41%), Positives = 144/246 (58%), Gaps = 7/246 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPAR+AS+R GKPLV+I GKPMI ER++ + + ++VATD E +A + G
Sbjct: 4 VVIIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGAERIIVATDHEDVARAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D ++VN+QGDEP+I II V L
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS----GKVNPQFPYLLHL 225
+ + AV E+A +PN VK V+D GYA+YFSR IP+++ G +L HL
Sbjct: 123 MATLAVPIHNAEEALNPNAVKVVLDAEGYALYFSRATIPWDRDRFAKGLETVGDNFLRHL 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI Y + F++ Y P+PL+ E LEQL+VL G K+ V + + GVD PED+E+
Sbjct: 183 GIYGYRAGFIRRYVNWQPSPLEHIEMLEQLRVLWYGEKIHVAVAQEVPGTGVDTPEDLER 242
Query: 285 IESFMR 290
+ + MR
Sbjct: 243 VRAEMR 248
>gi|83719573|ref|YP_441296.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Burkholderia
thailandensis E264]
gi|167580073|ref|ZP_02372947.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Burkholderia
thailandensis TXDOH]
gi|167618139|ref|ZP_02386770.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Burkholderia
thailandensis Bt4]
gi|257140034|ref|ZP_05588296.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Burkholderia
thailandensis E264]
gi|123537876|sp|Q2T0K3.1|KDSB_BURTA RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|83653398|gb|ABC37461.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Burkholderia
thailandensis E264]
Length = 263
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 90/255 (35%), Positives = 147/255 (57%), Gaps = 14/255 (5%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V ++PAR AS+R KPL ++ GKPM+ R ER++ A ++VA+D + + + ++ G
Sbjct: 8 VAVVPARLASTRLPNKPLADLGGKPMVVRVAERAREAGA-QQVLVASDAQSVLDAVREHG 66
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
D ++T +GT+R E KL D IVVN+QGDEPLI+P+++ V L A P
Sbjct: 67 FDAVLTRADHPSGTDRLAEVAAKLGFSDDTIVVNVQGDEPLIDPQLVCDVASHLAAHPSC 126
Query: 170 VFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKV----------NPQ 218
+TA + + + F+PN VK V+D +G A+YFSR IP+++ + P
Sbjct: 127 AIATAAHPIHEAHEVFNPNYVKVVLDANGVALYFSRAPIPWSRDAYLPHWPNIAAMPAPT 186
Query: 219 FPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAH-GVD 277
P H+G+ +Y + FL+ YP L P++ E LEQL+ + +G ++ V+ +H G+D
Sbjct: 187 CPVYRHIGLYAYRARFLRTYPTLAQAPIEAAEQLEQLRAMWHGERIAVLVTEHAPEAGID 246
Query: 278 APEDVEKIESFMRER 292
P D+E++++ R R
Sbjct: 247 TPADLERVQALFRSR 261
>gi|363582129|ref|ZP_09314939.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Flavobacteriaceae
bacterium HQM9]
Length = 239
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 136/229 (59%), Gaps = 4/229 (1%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR SSR K L+++ GK +IQR +E+ A +D + +A D+ ++ E C F +
Sbjct: 6 VIPARLKSSRLANKLLLDLGGKSIIQRVYEQCLKAKNIDAIYIAVDENELKEHCSLFCNN 65
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFS 172
VIMT + ++GT+R EA+ ++ D V+N+QGDEP I+P +I+ + L + + + S
Sbjct: 66 VIMTDTNHQSGTDRIAEAISNID--CDAVINVQGDEPFIDPNLIETIANCLDS--EEMVS 121
Query: 173 TAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDS 232
K +D +PN VK + D + AIYFSR IP+N+ G + Y HLGI Y
Sbjct: 122 AKCKLEKLDDIKNPNNVKVITDCNSKAIYFSRAAIPFNRDGVDVEKIDYFKHLGIYGYSK 181
Query: 233 NFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPED 281
FL Y + PT L++ E LEQL+V+ENG+ + +++ H A G+D ED
Sbjct: 182 KFLIKYAQMKPTRLEITEKLEQLRVIENGFSIHMVQTTHNAIGIDTLED 230
>gi|215486043|ref|YP_002328474.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O127:H6 str. E2348/69]
gi|254807761|sp|B7UN04.1|KDSB_ECO27 RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|215264115|emb|CAS08459.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O127:H6 str. E2348/69]
Length = 248
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 101/246 (41%), Positives = 145/246 (58%), Gaps = 7/246 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPAR+AS+R GKPLV+I GKPMI ER++ + + ++VATD E +A + G
Sbjct: 4 VVIIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGAERIIVATDHEDVARAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D ++VN+QGDEP+I II V L
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP----YLLHL 225
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ V +L HL
Sbjct: 123 MATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFVKDLETVGDNFLRHL 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI Y + F++ Y P+PL+ E LEQL+VL G K+ V + + GVD PED+++
Sbjct: 183 GIYGYRAGFIRRYVTWQPSPLEHIEMLEQLRVLWYGEKIHVAVAQEVPGTGVDTPEDLKR 242
Query: 285 IESFMR 290
+ + MR
Sbjct: 243 VRAEMR 248
>gi|170769212|ref|ZP_02903665.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia
albertii TW07627]
gi|170121864|gb|EDS90795.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia
albertii TW07627]
Length = 248
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 101/246 (41%), Positives = 144/246 (58%), Gaps = 7/246 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPAR++S+R GKPLV+I GK MI ER++ + + ++VATD E +A + G
Sbjct: 4 VVIIPARYSSTRLPGKPLVDINGKSMIVHVLERAR-ESGAERIIVATDHEDVARAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D I+VN+QGDEP+I II V L
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCAFSDDTIIVNVQGDEPMIPATIIRQVADNLAQRQVG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP----YLLHL 225
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ Q +L HL
Sbjct: 123 MATLAVPIHSAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAKSQQTVGDYFLRHL 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI Y + F++ Y P+PL+ E LEQL+VL G K+ V + + GVD PED+E+
Sbjct: 183 GIYGYRAGFIRRYVNWQPSPLEHIEMLEQLRVLWYGEKIHVAVAQEVPGTGVDTPEDLER 242
Query: 285 IESFMR 290
+ + MR
Sbjct: 243 VRAEMR 248
>gi|432890325|ref|ZP_20103257.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE165]
gi|431431450|gb|ELH13225.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE165]
Length = 246
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 90/242 (37%), Positives = 144/242 (59%), Gaps = 5/242 (2%)
Query: 48 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQ 107
S+ V +IPAR+ SSR GKPL++I+GKPMIQ +ER+ + + VATDD+++ + Q
Sbjct: 2 SKAVIVIPARYGSSRLPGKPLLDIVGKPMIQHVYERALQVAGVAEVWVATDDQRVEKAVQ 61
Query: 108 QFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
FG IMT +GT+R E + K+E DI +N+QGDEP+I P ++ +++ ++ P
Sbjct: 62 AFGGKAIMTRNDHESGTDRLVEVMHKVEA--DIYINLQGDEPMIRPRDVETLLQGMRDDP 119
Query: 168 DAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+T + E+A +P+ VK VV+ H A+YFSR IPY ++ + + YL H+GI
Sbjct: 120 ALPVATLCHVISAEEAAEPSTVKVVVNTHQDALYFSRSPIPYPRNAE---KARYLKHVGI 176
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
+Y + L+ Y L + + E LEQL+++ G ++ +V GVD P +EK+ +
Sbjct: 177 YAYRRDVLQNYSQLPESMPEQAESLEQLRLMSAGINIRTFEVAATGPGVDTPACLEKVRA 236
Query: 288 FM 289
M
Sbjct: 237 LM 238
>gi|358410427|gb|AEU09866.1| putative 3-deoxy-manno-octulosonate cytidylyltransferase
[Photobacterium damselae subsp. piscicida]
Length = 248
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 103/244 (42%), Positives = 146/244 (59%), Gaps = 9/244 (3%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR+ S+R GKPL +I GKPM+Q +E++ + D ++VATDD+++ + Q FG +
Sbjct: 6 IIPARYQSTRLPGKPLADIGGKPMVQWVYEQA-CKSGADKVIVATDDQRVFDAVQAFGGE 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MT ++GTER E ++K D IVVN+QGDEPLI II V L A +A
Sbjct: 65 VCMTRSDHQSGTERLAEVVEKYNLADDHIVVNVQGDEPLIPDTIIRQVADNL-AHKNAPM 123
Query: 172 STAVTSLKPED-AFDPNRVKCVVDNHGYAIYFSRGLIPYNKS--GKVNPQFPY--LLHLG 226
+T + ED F+PN VK V D GYA+YFSR IP+++ + Q + L H+G
Sbjct: 124 ATLAVEIDHEDEVFNPNAVKVVTDKDGYAMYFSRVSIPWDRDHFAQQPAQIHHNLLRHIG 183
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKI 285
I +Y + F+ Y PT L+ E LEQL+VL G K+ V + +D GVD PED+EK+
Sbjct: 184 IYAYRAGFINTYINWQPTALEQIEALEQLRVLWYGEKIHVDVAIDAPPAGVDTPEDLEKV 243
Query: 286 ESFM 289
+ +
Sbjct: 244 RALI 247
>gi|291287215|ref|YP_003504031.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Denitrovibrio
acetiphilus DSM 12809]
gi|290884375|gb|ADD68075.1| 3-deoxy-D-manno-octulosonatecytidylyltransferase [Denitrovibrio
acetiphilus DSM 12809]
Length = 241
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 97/239 (40%), Positives = 138/239 (57%), Gaps = 8/239 (3%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQF-GA 111
+IPAR AS+R GKPL I PMI R ER A D +VVATD ++I + C+ G
Sbjct: 5 VIPARHASTRLPGKPLRKIKDVPMILRVAERCMQAKA-DRVVVATDSQEILKVCETMDGL 63
Query: 112 DVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
+ M+S ++GT+R A+ DI++N+QGDEP I+P +I+ ++ LQ PD +
Sbjct: 64 ESTMSSPDIQSGTDRV--AVVAKFAMDDIIINVQGDEPFIDPALINMLIDDLQKNPDVMM 121
Query: 172 STAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSY 230
+TA ED DPN VK V D GYA+YFSR IP+N+ N Q Y H+GI Y
Sbjct: 122 NTAACRFDAGEDIADPNSVKVVTDKDGYALYFSRAAIPFNRD---NAQTDYYRHIGIYGY 178
Query: 231 DSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFM 289
+L + + P+ L+ E LEQL+ LENG ++KV+ +++ VD ED+ K E +
Sbjct: 179 RKEWLMQFASMEPSSLEKAEKLEQLRALENGVRIKVLNTEYKPVSVDTEEDLLKAEEII 237
>gi|398941156|ref|ZP_10669689.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas sp.
GM41(2012)]
gi|398161975|gb|EJM50188.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas sp.
GM41(2012)]
Length = 254
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 101/246 (41%), Positives = 145/246 (58%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IP+R+AS+R GKPL+ I GKPMIQ WE++ ++ +VVATDD +I E C+ FGA+
Sbjct: 8 VIPSRYASTRLPGKPLLLIAGKPMIQHVWEQAS-KSSAQRVVVATDDARIVEACKGFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V++T E +GT+R E KL D IVVN+QGDEPLI P +ID V L A +A
Sbjct: 67 VVLTREDHNSGTDRLAEVAAKLGLAPDAIVVNVQGDEPLIPPSVIDQVAANLAAHTEARM 126
Query: 172 STAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPY-----NKSGKVNPQ-FPYLLH 224
+T ++ E F+PN VK V D +G A+ FSR +P+ KS + P+ PY H
Sbjct: 127 ATLAEPIEDVETLFNPNVVKVVSDLNGLALTFSRATLPWARDAFAKSREQLPEGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDAPEDVE 283
+GI +Y + FL + P L+ E LEQL+ L +G ++ V + GVD ED+E
Sbjct: 187 IGIYAYRAGFLHDFVSWGPCWLENTESLEQLRALWHGVRIHVADALIAPPTGVDTVEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|425898385|ref|ZP_18874976.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas
chlororaphis subsp. aureofaciens 30-84]
gi|397891283|gb|EJL07761.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas
chlororaphis subsp. aureofaciens 30-84]
Length = 254
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 100/246 (40%), Positives = 143/246 (58%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPARFAS+R GKPL I GKPMIQ WE++ + +VVATDD +I E CQ FGA+
Sbjct: 8 VIPARFASTRLPGKPLHLIAGKPMIQHVWEQA-CKSAAQRVVVATDDARIVEACQGFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
++T E +GT+R E +L D IVVN+QGDEPLI P +ID V L A +A
Sbjct: 67 AVLTREDHNSGTDRLAEVASQLGLAADAIVVNVQGDEPLIPPAVIDQVAANLAAHTEASM 126
Query: 172 STAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPY-----NKSGKVNPQ-FPYLLH 224
+T ++ E F+PN VK V D +G A+ FSR +P+ K+ + P+ PY H
Sbjct: 127 ATLAEPIEDVETLFNPNVVKVVSDINGLALTFSRATLPWARDAFAKNRDLLPEGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDAPEDVE 283
+GI +Y + FL + P L+ E LEQL+ L +G ++ V ++ G+D ED+E
Sbjct: 187 IGIYAYRAGFLHDFVNWGPCWLENTESLEQLRALWHGVRIHVADALEAPPGGIDTAEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|254508518|ref|ZP_05120636.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio
parahaemolyticus 16]
gi|219548543|gb|EED25550.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Vibrio
parahaemolyticus 16]
Length = 250
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 97/246 (39%), Positives = 143/246 (58%), Gaps = 7/246 (2%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ S+R GKPL +I GKPMIQ +E++ + +++++ATDD+++ Q FG
Sbjct: 6 VIPARYQSTRLPGKPLADIGGKPMIQWVYEQA-IQAGAENVIIATDDKRVESAVQGFGGQ 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS + +GTER E ++ + D IVVN+QGDEPLI P II V L +
Sbjct: 65 VCMTSPNHESGTERLAEVVELMAIPDDHIVVNVQGDEPLIPPSIIRQVADNLANCSAPMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNP----QFPYLLHLGI 227
+ AV + F+PN VK + D GYA+YFSR IP+++ N + P + H+GI
Sbjct: 125 TLAVEIEDEAEVFNPNAVKVLTDKDGYAMYFSRATIPWDRDSFANENKEIKQPLMRHIGI 184
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKIE 286
+Y + F+ Y PT L+ E LEQL+VL G K+ V + + A GVD PED++ +
Sbjct: 185 YAYRAGFINTYINWQPTALEKIECLEQLRVLWYGEKIHVEVAKESPAAGVDTPEDLQVVR 244
Query: 287 SFMRER 292
+ R
Sbjct: 245 ELIARR 250
>gi|226724337|sp|B8CMP6.1|KDSB_SHEPW RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|212556982|gb|ACJ29436.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shewanella
piezotolerans WP3]
Length = 245
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 98/242 (40%), Positives = 142/242 (58%), Gaps = 8/242 (3%)
Query: 50 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQF 109
V +IPAR+ SSRF GKPL I GKPMIQ +ER+ LA L + VATDD++I + + F
Sbjct: 3 VTLLIPARYGSSRFPGKPLAPINGKPMIQHVYERASLAKGLTDIYVATDDDRIKDAVEGF 62
Query: 110 GADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
G V+MTS +GT+R +A+ +L + D+VVN+QGD+PLI+P I+ ++ + P
Sbjct: 63 GGKVVMTSAEAASGTDRIEDAITQLGLAEDDLVVNLQGDQPLIDPISIEQIISLFERHP- 121
Query: 169 AVFSTAVTSLK---PEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHL 225
F A + E+ DP VK V DN A+YFSR IP+ G+ +P HL
Sbjct: 122 GEFGMATLGFQITEEEELNDPKHVKLVFDNEFNALYFSRARIPF---GRDTDDYPVYKHL 178
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKI 285
G+ +Y F++ + L L+ E LEQL+ LE+G+K+KV ++ VD PED+
Sbjct: 179 GVYAYTRKFVQTFAKLPLGRLEDLEKLEQLRALEHGHKIKVAISAFDSPEVDTPEDIRIC 238
Query: 286 ES 287
E+
Sbjct: 239 EA 240
>gi|307253841|ref|ZP_07535694.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|307258297|ref|ZP_07540039.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|307260539|ref|ZP_07542232.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|306863201|gb|EFM95142.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|306867636|gb|EFM99482.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|306869768|gb|EFN01552.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
Length = 260
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 102/259 (39%), Positives = 146/259 (56%), Gaps = 13/259 (5%)
Query: 39 YLGRSKNFRSRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATD 98
Y G NF IIPAR+ASSR KPL++I GKPMIQ WE+++ A +++ATD
Sbjct: 6 YKGNCMNF----TVIIPARYASSRLPRKPLLDIAGKPMIQHVWEKAQQAGA-TRVIIATD 60
Query: 99 DEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIID 157
+I + FGA+V MTS+ +GTER E ++K++ D I+VN+QGDEPLI P I+
Sbjct: 61 HPEIEATAKAFGAEVCMTSDQHNSGTERLAEVIEKMQIADDEIIVNVQGDEPLIPPVIVS 120
Query: 158 GVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS--GKV 215
V + L + + AV E+ F+PN VK + D +G A+YFSR IP+ +
Sbjct: 121 QVAENLDRCQVNMATLAVKLTTKEELFNPNAVKALADKNGMALYFSRAPIPFARDHFADC 180
Query: 216 NPQF----PYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDH 271
+ F YL H+GI +Y + F+K Y PT L+ E LEQL+ L G K+ +
Sbjct: 181 DDAFVASQNYLRHIGIYAYRAGFVKQYVAWQPTQLEQLESLEQLRALWYGEKIHIELAKQ 240
Query: 272 EAH-GVDAPEDVEKIESFM 289
GVD ED+E++ +
Sbjct: 241 APQVGVDTQEDLERVRRIL 259
>gi|366158433|ref|ZP_09458295.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia sp.
TW09308]
Length = 248
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 102/248 (41%), Positives = 144/248 (58%), Gaps = 11/248 (4%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPAR+AS+R GKPLV+I GKPMI ER++ + D ++VATD + +A + G
Sbjct: 4 VVIIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGADRIIVATDHDDVARVVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D ++VN+QGDEP+I II V L
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQREVG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSG------KVNPQFPYLL 223
+ + AV E+ F+PN VK V+D GYA+YFSR IP+++ V F L
Sbjct: 123 MATLAVPIHNAEEVFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAKSLETVGDNF--LR 180
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDV 282
HLGI Y + F++ Y P+PL+ E LEQL+VL G K+ V + + GVD PED+
Sbjct: 181 HLGIYGYRAGFIRRYVNWQPSPLEHIEMLEQLRVLWYGEKIHVAVAREVPGTGVDTPEDL 240
Query: 283 EKIESFMR 290
E++ + MR
Sbjct: 241 ERVRAEMR 248
>gi|432371673|ref|ZP_19614724.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE11]
gi|430898816|gb|ELC20947.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE11]
Length = 248
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 102/248 (41%), Positives = 144/248 (58%), Gaps = 11/248 (4%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPAR+AS+R GKPLV+I GKPMI ER++ + D ++VATD + +A + G
Sbjct: 4 VVIIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGADRIIVATDHDDVARVVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D ++VN+QGDEP+I II V L
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQREVG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSG------KVNPQFPYLL 223
+ + AV E+ F+PN VK V+D GYA+YFSR IP+++ V F L
Sbjct: 123 MATLAVPIHNAEEVFNPNAVKVVLDAEGYALYFSRATIPWDRDHFAKSLETVGDNF--LR 180
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDV 282
HLGI Y + F++ Y P+PL+ E LEQL+VL G K+ V + + GVD PED+
Sbjct: 181 HLGIYGYRAGFIRRYVNWQPSPLEHIEMLEQLRVLWYGEKIHVAVAREVPGTGVDTPEDL 240
Query: 283 EKIESFMR 290
E++ + MR
Sbjct: 241 ERVRAEMR 248
>gi|149910077|ref|ZP_01898724.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Moritella sp.
PE36]
gi|149806802|gb|EDM66764.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Moritella sp.
PE36]
Length = 257
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 106/240 (44%), Positives = 143/240 (59%), Gaps = 13/240 (5%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIP+R+ SSR GKPLV+I GK MIQR E++ L + +VVATDDE+I + G +
Sbjct: 6 IIPSRYQSSRLPGKPLVDICGKTMIQRVAEQA-LQSGASRVVVATDDERIEQAVTALGYE 64
Query: 113 VIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKAL---QAAPD 168
V MTS + +GTER E KL DI+VN+QGDEPLI P II+ V L A
Sbjct: 65 VCMTSPTHNSGTERLAEVCSKLGFNDDDIIVNVQGDEPLIPPRIIEQVATNLGKQSEARM 124
Query: 169 AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP-----YLL 223
A S A+T + E+ F+PN VK V D GYA+YFSR IPY++ ++ Y
Sbjct: 125 ATLSVAITDV--EEVFNPNAVKVVTDKQGYALYFSRAPIPYHRDNFMHEPVTEIKPVYQR 182
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIK-VDHEAHGVDAPEDV 282
H+GI +Y + F++ Y T L+ E LEQL+VL +G K+ V + ++ A GVD PED+
Sbjct: 183 HIGIYAYRAGFIRDYVQWAETELEQIESLEQLRVLWHGEKIHVEEALEAPAAGVDTPEDL 242
>gi|397677448|ref|YP_006518986.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Zymomonas
mobilis subsp. mobilis ATCC 29191]
gi|395398137|gb|AFN57464.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Zymomonas
mobilis subsp. mobilis ATCC 29191]
Length = 266
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 93/260 (35%), Positives = 149/260 (57%), Gaps = 18/260 (6%)
Query: 53 IIPARFASSRFEGKPLVNILG-----KPMIQRTWERSKLATTLDHLVVATDDEKIAECCQ 107
+IPARFAS+R+ GKPLV + G KP+I R+W + +D +VVATDD++IA+ Q
Sbjct: 6 VIPARFASTRYPGKPLVPLAGADGDKKPLIIRSWMAASSVRGVDRVVVATDDQRIADVVQ 65
Query: 108 QFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
+ G + +MT SCRNGTERC L +L YD+++N QGD PL I++ ++ ++ +P
Sbjct: 66 KAGGEALMTPTSCRNGTERCAAVLDQLGDDYDLIINFQGDAPLTPAFIVEKLIDIMKDSP 125
Query: 168 DAVFSTAVTSLKPE---DAFDPNR------VKCVVDNHGYAIYFSRGLIPY-NKSGKVNP 217
+ +T + P FD + V + G A+YFS+ +IP+ +K+ + +P
Sbjct: 126 EYGIATPAVTTSPTVRFQLFDDQKQGLVGGTTVVRNKKGDALYFSKSVIPHLSKADRADP 185
Query: 218 QFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDH---EAH 274
P LH+G+ +Y + L+ Y P+ L+L E LEQL+ L+ G +KV +D E
Sbjct: 186 DLPVFLHIGLYAYRPDTLRQYASRSPSKLELIEGLEQLRFLDEGIAVKVPLIDKPDLELW 245
Query: 275 GVDAPEDVEKIESFMRERNL 294
++ P D + IE+ + R +
Sbjct: 246 ELNNPVDRDLIEATLMARGI 265
>gi|384412531|ref|YP_005621896.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Zymomonas
mobilis subsp. mobilis ATCC 10988]
gi|335932905|gb|AEH63445.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Zymomonas
mobilis subsp. mobilis ATCC 10988]
Length = 266
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 93/260 (35%), Positives = 149/260 (57%), Gaps = 18/260 (6%)
Query: 53 IIPARFASSRFEGKPLVNILG-----KPMIQRTWERSKLATTLDHLVVATDDEKIAECCQ 107
+IPARFAS+R+ GKPLV + G KP+I R+W + +D +VVATDD++IA+ Q
Sbjct: 6 VIPARFASTRYPGKPLVPLAGADGDKKPLIIRSWMAASSVRGVDRVVVATDDQRIADVVQ 65
Query: 108 QFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
+ G + +MT SCRNGTERC L +L YD+++N QGD PL I++ ++ ++ +P
Sbjct: 66 KAGGEALMTPTSCRNGTERCAAVLDQLGDDYDLIINFQGDAPLTPAFIVEKLIDIMKDSP 125
Query: 168 DAVFSTAVTSLKPE---DAFDPNR------VKCVVDNHGYAIYFSRGLIPY-NKSGKVNP 217
+ +T + P FD + V + G A+YFS+ +IP+ +K+ + +P
Sbjct: 126 EYGIATPAVTTSPTVRFQLFDDQKQGLVGGTTVVRNKKGEALYFSKSVIPHLSKADRADP 185
Query: 218 QFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDH---EAH 274
P LH+G+ +Y + L+ Y P+ L+L E LEQL+ L+ G +KV +D E
Sbjct: 186 DLPVFLHIGLYAYRPDTLRQYASRAPSKLELIEGLEQLRFLDEGIAVKVPLIDKPDLELW 245
Query: 275 GVDAPEDVEKIESFMRERNL 294
++ P D + IE+ + R +
Sbjct: 246 ELNNPVDRDLIEATLMARGI 265
>gi|311280168|ref|YP_003942399.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Enterobacter
cloacae SCF1]
gi|308749363|gb|ADO49115.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Enterobacter
cloacae SCF1]
Length = 248
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/246 (40%), Positives = 145/246 (58%), Gaps = 7/246 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPAR+AS+R GKPL +I GKPMI ER++ + ++VATD + +A + G
Sbjct: 4 VVIIPARYASTRLPGKPLQDINGKPMIVHVLERAR-ESGAARIIVATDHDDVARAVEAVG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D ++VN+QGDEP+I P II V + L A+
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCGFSDDTLIVNVQGDEPMIPPVIIRQVAENLAASKSG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP----YLLHL 225
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ + L H+
Sbjct: 123 MATLAVPIHDAEEAFNPNAVKVVMDAQGYALYFSRATIPWDRDRFAQSREAIGDTLLRHI 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI Y + F++ Y G P+PL+ E LEQL+VL G K+ V + GVD PED+ +
Sbjct: 183 GIYGYRAGFIRRYVGWAPSPLEQIEMLEQLRVLWYGEKIHVAVARQVPGTGVDTPEDLAR 242
Query: 285 IESFMR 290
+ + +R
Sbjct: 243 VRAELR 248
>gi|167835692|ref|ZP_02462575.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Burkholderia
thailandensis MSMB43]
gi|424902397|ref|ZP_18325913.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Burkholderia
thailandensis MSMB43]
gi|390932772|gb|EIP90172.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Burkholderia
thailandensis MSMB43]
Length = 263
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 90/255 (35%), Positives = 147/255 (57%), Gaps = 14/255 (5%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V ++PAR AS+R KPL ++ GKPM+ R ER++ A ++VA+D + + + ++ G
Sbjct: 8 VAVVPARLASTRLPNKPLADLGGKPMVVRVAERAREAGA-QQVLVASDAQSVLDAVREHG 66
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
D ++T +GT+R E KL D IVVN+QGDEPLI+P+++ V L A P
Sbjct: 67 FDAVLTRADHPSGTDRLAEVAAKLGFGDDTIVVNVQGDEPLIDPQLVCDVASHLAAHPSC 126
Query: 170 VFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKV----------NPQ 218
+TA + + + F+PN VK V+D +G A+YFSR IP+++ + P
Sbjct: 127 AIATAAHPIHEAHEVFNPNYVKVVLDANGVALYFSRAPIPWSRDAYLPHWPNVAAMPAPT 186
Query: 219 FPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAH-GVD 277
P H+G+ +Y + FL+ YP L P++ E LEQL+ + +G ++ V+ +H G+D
Sbjct: 187 CPVYRHIGLYAYRARFLRTYPTLAQAPIEAAEQLEQLRAMWHGERIAVLVTEHAPEAGID 246
Query: 278 APEDVEKIESFMRER 292
P D+E++++ R R
Sbjct: 247 TPADLERVQALFRSR 261
>gi|46143310|ref|ZP_00135509.2| COG1212: CMP-2-keto-3-deoxyoctulosonic acid synthetase
[Actinobacillus pleuropneumoniae serovar 1 str. 4074]
Length = 260
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 102/259 (39%), Positives = 146/259 (56%), Gaps = 13/259 (5%)
Query: 39 YLGRSKNFRSRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATD 98
Y G NF IIPAR+ASSR KPL++I GKPMIQ WE+++ A +++ATD
Sbjct: 6 YKGNVMNFTV----IIPARYASSRLPRKPLLDIAGKPMIQHVWEKAQQAGA-TRVIIATD 60
Query: 99 DEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIID 157
+I + FGA+V MTS+ +GTER E ++K++ D I+VN+QGDEPLI P I+
Sbjct: 61 HPEIEATAKAFGAEVCMTSDQHNSGTERLAEVIEKMQIADDEIIVNVQGDEPLIPPVIVS 120
Query: 158 GVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS--GKV 215
V + L + + AV E+ F+PN VK + D +G A+YFSR IP+ +
Sbjct: 121 QVAENLDRCQVNMATLAVQLTTKEELFNPNAVKALADKNGMALYFSRAPIPFARDHFADC 180
Query: 216 NPQF----PYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDH 271
+ F YL H+GI +Y + F+K Y PT L+ E LEQL+ L G K+ +
Sbjct: 181 DDAFVASQNYLRHIGIYAYRAGFVKQYVAWQPTQLEQLESLEQLRALWYGEKIHIELAKQ 240
Query: 272 EAH-GVDAPEDVEKIESFM 289
GVD ED+E++ +
Sbjct: 241 APQVGVDTQEDLERVRRIL 259
>gi|300772964|ref|ZP_07082833.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Sphingobacterium
spiritivorum ATCC 33861]
gi|300759135|gb|EFK55962.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Sphingobacterium
spiritivorum ATCC 33861]
Length = 246
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 97/247 (39%), Positives = 146/247 (59%), Gaps = 7/247 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+++GIIPAR+ASSRF GKPL++I GK MIQR +E+ K L +VVATDD +I E +
Sbjct: 2 KIIGIIPARYASSRFPGKPLIDIAGKSMIQRVYEQVKQTPGLHEVVVATDDIRIEEHVRS 61
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
F +V+MTS++ +GT+RC E + K+ +DI +NIQGDEP I P I+ ++ +
Sbjct: 62 FAGNVVMTSDTHESGTDRCAEVISKV-SGFDIAINIQGDEPFINPLQIELLISCFENERT 120
Query: 169 AVFSTAVTSLKPE-DAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP---YLLH 224
+ +T V + E + + N K V G AIYFSR IP+ ++ + + H
Sbjct: 121 QI-ATLVKEIHTEAELLNVNIPKVVRSASGEAIYFSRQTIPFIRNTEQKNWLTAHQFYKH 179
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEK 284
+GI Y N L+ L + L+ E LEQL+ +ENGY+++ HE VD P+D+E
Sbjct: 180 IGIYGYRKNILQELTKLPVSILEKAESLEQLRWVENGYRIQTAVTTHETIAVDTPQDLEH 239
Query: 285 I-ESFMR 290
I +++ R
Sbjct: 240 IMQTYFR 246
>gi|149204255|ref|ZP_01881222.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Roseovarius sp.
TM1035]
gi|149142140|gb|EDM30187.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Roseovarius sp.
TM1035]
Length = 266
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 148/264 (56%), Gaps = 18/264 (6%)
Query: 50 VVGIIPARFASSRFEGKPLVNILG-----KPMIQRTWERSKLATTLDHLVVATDDEKIAE 104
VV +IPAR+AS+R+ GKPLV + G K +IQR+WE + +D +VVATDD++I
Sbjct: 3 VVIVIPARYASTRYPGKPLVALTGATGEAKSLIQRSWEAASQVQGVDRVVVATDDDRIRA 62
Query: 105 CCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQ 164
+ FGA+V+MTSESC NGTERC EAL L YDI+VN+QGD PL ++ ++ L+
Sbjct: 63 ASEAFGAEVVMTSESCGNGTERCAEALDVLGGGYDIIVNLQGDAPLTPHWFVEDLIAGLR 122
Query: 165 AAPDAVFSTAVTSL--KPEDAFDPNRVK-------CVVDNHGYAIYFSRGLIPYN-KSGK 214
A A +T V + + F +R V + A+YFS+ +IPY + +
Sbjct: 123 ADTGAEVATPVLRCDGRALNGFLDDRANGRVGGTTAVFEEGARALYFSKEVIPYTPRRYE 182
Query: 215 VNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAH 274
P H+G+ +Y L+ Y PL+ E LEQL+ LE G + ++V +
Sbjct: 183 AEEATPVFHHVGVYAYRPQALRDYATWPMGPLEQLEGLEQLRFLERGRAVLCVEVAAQGR 242
Query: 275 G---VDAPEDVEKIESFMRERNLS 295
++ PEDV +IE+ MRE ++
Sbjct: 243 QFWELNNPEDVPRIEAMMREMGMA 266
>gi|78358686|ref|YP_390135.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Desulfovibrio
alaskensis G20]
gi|123551178|sp|Q30V56.1|KDSB_DESDG RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|78221091|gb|ABB40440.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Desulfovibrio
alaskensis G20]
Length = 249
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 92/241 (38%), Positives = 137/241 (56%), Gaps = 3/241 (1%)
Query: 52 GIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGA 111
GIIPAR+ SSRF GKPL +I G+PM W R+ L L +V+ATDD +IAE
Sbjct: 8 GIIPARYDSSRFPGKPLADIQGRPMFWHVWHRASLCPQLQQVVLATDDGRIAEAAHALDV 67
Query: 112 DVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAV 170
+MT +GT+R EA L+ D +VVNIQGDEP +EP ++ +V+
Sbjct: 68 PYVMTRSDHPSGTDRVFEAATLLQLDEDAVVVNIQGDEPALEPRMLSELVRPFAEDAAVQ 127
Query: 171 FSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSY 230
+T ++ P+ A P+ VK V G A+YFSR IPY + G+ P + H+G+ ++
Sbjct: 128 VTTLARAISPQQAACPDVVKVVCTAGGDALYFSRAAIPYCRDGQSGA--PCMGHVGLYAF 185
Query: 231 DSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFMR 290
L+ + L + L+ E LEQL++LEN ++V++ + HGVD P D++ I + +R
Sbjct: 186 RYQALRRFTQLEQSVLERTEKLEQLRLLENNIPIRVVETAYRTHGVDRPGDIDVIINMIR 245
Query: 291 E 291
E
Sbjct: 246 E 246
>gi|163752193|ref|ZP_02159396.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Shewanella
benthica KT99]
gi|161327922|gb|EDP99099.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Shewanella
benthica KT99]
Length = 245
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 100/243 (41%), Positives = 139/243 (57%), Gaps = 10/243 (4%)
Query: 50 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQF 109
V +IPAR+ SSRF GKPL I GKPMIQ ER+ LA L + VATDD +I + + F
Sbjct: 3 VTLLIPARYGSSRFPGKPLAPINGKPMIQHVVERASLAKGLTSIYVATDDVRIKDAVEAF 62
Query: 110 GADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
G VIMTS +GT+R +A+ +L K D++VN+QGD+PLI+P I+ ++ + P
Sbjct: 63 GGQVIMTSPEAASGTDRIEDAITQLGLKDDDLIVNLQGDQPLIDPISIEQIISLFKRHPG 122
Query: 169 ----AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLH 224
A +T D DP VK V DN YA+YFSR IP+ + K +P H
Sbjct: 123 EFGMATLGFEITEKHELD--DPKHVKMVFDNDFYALYFSRARIPFGRDTK---DYPVYKH 177
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEK 284
LGI +Y F+ + L L+ E LEQL+ LE+G+++KV ++ VD PED+
Sbjct: 178 LGIYAYTRKFVSTFAKLPLGRLEDLEKLEQLRALEHGHRIKVAISAFDSPEVDTPEDIRI 237
Query: 285 IES 287
E+
Sbjct: 238 CEA 240
>gi|389685043|ref|ZP_10176367.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas
chlororaphis O6]
gi|388550696|gb|EIM13965.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas
chlororaphis O6]
Length = 254
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/246 (41%), Positives = 142/246 (57%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPARFAS+R GKPL I GKPMIQ WE++ + +VVATDD +I E CQ FGA+
Sbjct: 8 VIPARFASTRLPGKPLQLIAGKPMIQHVWEQA-CKSAAQRVVVATDDVRIVEACQGFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
++T E +GT+R E +L D IVVN+QGDEPLI P +ID V L A +A
Sbjct: 67 AVLTREDHNSGTDRLAEVASQLGLAADAIVVNVQGDEPLIPPAVIDQVAANLAAHTEASM 126
Query: 172 STAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPY-----NKSGKVNPQ-FPYLLH 224
+T ++ E F+PN VK V D +G A+ FSR +P+ K+ + P+ PY H
Sbjct: 127 ATLAEPIEDVETLFNPNVVKVVSDINGLALTFSRATLPWARDAFAKNRDLLPEGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDAPEDVE 283
+GI +Y + FL + P L+ E LEQL+ L +G ++ V + GVD ED+E
Sbjct: 187 IGIYAYRAGFLHDFVNWGPCWLENTESLEQLRALWHGVRIHVADALQAPPGGVDTAEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|344337676|ref|ZP_08768610.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Thiocapsa marina
5811]
gi|343802629|gb|EGV20569.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Thiocapsa marina
5811]
Length = 261
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/243 (39%), Positives = 140/243 (57%), Gaps = 10/243 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ S+R GKPL++I GKPMIQ ER++ + + ++VATDD +IA+ C FGAD
Sbjct: 16 VIPARYGSTRLPGKPLLSIAGKPMIQHVVERARESRAAE-ILVATDDRRIADVCHGFGAD 74
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V+MT R+G+ER +E + D +VVN+QGDEP + ++D V L D
Sbjct: 75 VVMTGSEHRSGSERISEVIGLRGWGDDVVVVNLQGDEPAMPAALLDQVASDLAGIADLGM 134
Query: 172 STAVTSLKPED-AFDPNRVKCVVDNHGYAIYFSRGLIPYNKS------GKVNPQFPYLLH 224
ST + FDP+ VK V D GYA+YFSR +P+++ ++ +L H
Sbjct: 135 STLAAPISDRAILFDPHVVKVVTDAKGYALYFSRAPMPWHRDEFLADRAELPTSVAFLRH 194
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVE 283
+G+ +Y FLK Y P+PL++ E LEQL+VL +G ++ V + GVD D+
Sbjct: 195 IGLYAYRVGFLKRYLAWAPSPLEVAESLEQLRVLWHGERIHVAVAASEPGPGVDTAADLA 254
Query: 284 KIE 286
K E
Sbjct: 255 KAE 257
>gi|392376064|ref|YP_003207897.1| CTP:CMP-3-deoxy-D-manno-octulosonate transferase [Candidatus
Methylomirabilis oxyfera]
gi|258593757|emb|CBE70098.1| CTP:CMP-3-deoxy-D-manno-octulosonate transferase [Candidatus
Methylomirabilis oxyfera]
Length = 253
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/243 (39%), Positives = 141/243 (58%), Gaps = 4/243 (1%)
Query: 50 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQF 109
+VG+IPAR AS+R GK L I G+PM+ + R+ LD LVVATD +++ + C
Sbjct: 9 IVGVIPARLASTRLPGKVLRPICGRPMLYHVFARASRCGLLDDLVVATDSKEVYDYCVGN 68
Query: 110 GADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
V MTS +GT+R +E +Q L DI VNIQGDEP+I P ++ ++++ P
Sbjct: 69 RMKVRMTSSCHASGTDRIHEVMQTLSA--DIYVNIQGDEPMIRPAHLEVLLQSFLKDPSV 126
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQS 229
T T + E+A +PN VK V D G A+YFSR IPYN+ + Y HLGI +
Sbjct: 127 QVGTVKTLITAEEAHNPNCVKVVTDLDGRALYFSRHAIPYNRDRIA--EIGYFKHLGIYA 184
Query: 230 YDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFM 289
Y L+ + L P+ L+ E LEQL+ LE+G + V++ ++ GVD ED+ ++E +
Sbjct: 185 YTGPALQRFHQLLPSLLEQTEKLEQLRFLEHGIPISVVETPYDTIGVDTEEDLARVERYF 244
Query: 290 RER 292
+ER
Sbjct: 245 QER 247
>gi|74311475|ref|YP_309894.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Shigella sonnei
Ss046]
gi|82544657|ref|YP_408604.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Shigella boydii
Sb227]
gi|187734186|ref|YP_001880885.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Shigella boydii
CDC 3083-94]
gi|260854209|ref|YP_003228100.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O26:H11 str. 11368]
gi|260867090|ref|YP_003233492.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O111:H- str. 11128]
gi|383177563|ref|YP_005455568.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Shigella sonnei
53G]
gi|414575195|ref|ZP_11432401.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shigella sonnei
3233-85]
gi|415809500|ref|ZP_11502270.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
LT-68]
gi|415824676|ref|ZP_11512910.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
OK1180]
gi|415850418|ref|ZP_11527293.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shigella sonnei
53G]
gi|416275254|ref|ZP_11643909.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Shigella
dysenteriae CDC 74-1112]
gi|416291779|ref|ZP_11650014.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Shigella flexneri
CDC 796-83]
gi|416340517|ref|ZP_11675470.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
EC4100B]
gi|417120624|ref|ZP_11970182.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
97.0246]
gi|417161523|ref|ZP_11997759.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
99.0741]
gi|417193475|ref|ZP_12015322.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
4.0522]
gi|417209602|ref|ZP_12020886.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
JB1-95]
gi|417229515|ref|ZP_12031101.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
5.0959]
gi|417294972|ref|ZP_12082228.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
900105 (10e)]
gi|417590641|ref|ZP_12241356.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
2534-86]
gi|417682808|ref|ZP_12332161.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shigella boydii
3594-74]
gi|417711680|ref|ZP_12360679.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shigella
flexneri K-272]
gi|417716415|ref|ZP_12365344.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shigella
flexneri K-227]
gi|417827012|ref|ZP_12473583.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shigella
flexneri J1713]
gi|418263433|ref|ZP_12884402.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shigella sonnei
str. Moseley]
gi|419196041|ref|ZP_13739445.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC8A]
gi|419202004|ref|ZP_13745226.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC8B]
gi|419208072|ref|ZP_13751195.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC8C]
gi|419214617|ref|ZP_13757639.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC8D]
gi|419220219|ref|ZP_13763171.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC8E]
gi|419225709|ref|ZP_13768592.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC9A]
gi|419231649|ref|ZP_13774437.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC9B]
gi|419236895|ref|ZP_13779638.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC9C]
gi|419242425|ref|ZP_13785072.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC9D]
gi|419247946|ref|ZP_13790553.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC9E]
gi|419253683|ref|ZP_13796222.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC10A]
gi|419259815|ref|ZP_13802257.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC10B]
gi|419265556|ref|ZP_13807937.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC10C]
gi|419271426|ref|ZP_13813750.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC10D]
gi|419282908|ref|ZP_13825119.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC10F]
gi|419873436|ref|ZP_14395427.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O111:H11 str. CVM9534]
gi|419886063|ref|ZP_14406716.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O111:H11 str. CVM9545]
gi|419889496|ref|ZP_14409892.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O111:H8 str. CVM9570]
gi|419894670|ref|ZP_14414566.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O111:H8 str. CVM9574]
gi|419899721|ref|ZP_14419213.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O26:H11 str. CVM9942]
gi|419911159|ref|ZP_14429657.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O26:H11 str. CVM10026]
gi|419928609|ref|ZP_14446317.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
541-1]
gi|420088695|ref|ZP_14600555.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O111:H8 str. CVM9602]
gi|420098131|ref|ZP_14609412.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O111:H8 str. CVM9634]
gi|420105609|ref|ZP_14616079.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O111:H11 str. CVM9455]
gi|420107366|ref|ZP_14617710.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O111:H11 str. CVM9553]
gi|420117591|ref|ZP_14626946.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O26:H11 str. CVM10021]
gi|420124140|ref|ZP_14633010.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O26:H11 str. CVM10030]
gi|420129712|ref|ZP_14638238.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O26:H11 str. CVM10224]
gi|420133145|ref|ZP_14641415.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O26:H11 str. CVM9952]
gi|420319460|ref|ZP_14821307.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shigella
flexneri 2850-71]
gi|420335148|ref|ZP_14836764.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shigella
flexneri K-315]
gi|420351690|ref|ZP_14852874.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shigella boydii
4444-74]
gi|420357690|ref|ZP_14858696.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shigella sonnei
3226-85]
gi|420362650|ref|ZP_14863565.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shigella sonnei
4822-66]
gi|420380964|ref|ZP_14880419.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shigella
dysenteriae 225-75]
gi|421683174|ref|ZP_16122970.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shigella
flexneri 1485-80]
gi|424749589|ref|ZP_18177686.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O26:H11 str. CFSAN001629]
gi|424755950|ref|ZP_18183794.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O111:H11 str. CFSAN001630]
gi|424769351|ref|ZP_18196578.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O111:H8 str. CFSAN001632]
gi|425377829|ref|ZP_18762195.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
EC1865]
gi|432813023|ref|ZP_20046868.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE101]
gi|123559222|sp|Q31YT2.1|KDSB_SHIBS RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|123617585|sp|Q3Z3K3.1|KDSB_SHISS RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|238691687|sp|B2TUG1.1|KDSB_SHIB3 RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|73854952|gb|AAZ87659.1| CTP:CMP-3-deoxy-D-manno-octulosonate transferase [Shigella sonnei
Ss046]
gi|81246068|gb|ABB66776.1| CTP:CMP-3-deoxy-D-manno-octulosonate transferase [Shigella boydii
Sb227]
gi|187431178|gb|ACD10452.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shigella boydii
CDC 3083-94]
gi|257752858|dbj|BAI24360.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O26:H11 str. 11368]
gi|257763446|dbj|BAI34941.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O111:H- str. 11128]
gi|320173259|gb|EFW48468.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Shigella
dysenteriae CDC 74-1112]
gi|320187454|gb|EFW62144.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Shigella flexneri
CDC 796-83]
gi|320202314|gb|EFW76885.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
EC4100B]
gi|323165389|gb|EFZ51176.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shigella sonnei
53G]
gi|323174981|gb|EFZ60596.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
LT-68]
gi|323175459|gb|EFZ61054.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
OK1180]
gi|332093492|gb|EGI98550.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shigella boydii
3594-74]
gi|333008902|gb|EGK28362.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shigella
flexneri K-272]
gi|333020212|gb|EGK39482.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shigella
flexneri K-227]
gi|335576456|gb|EGM62707.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shigella
flexneri J1713]
gi|345344587|gb|EGW76954.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
2534-86]
gi|378051849|gb|EHW14164.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC8A]
gi|378055648|gb|EHW17909.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC8B]
gi|378061246|gb|EHW23432.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC8C]
gi|378066870|gb|EHW28998.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC8D]
gi|378071453|gb|EHW33523.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC8E]
gi|378080078|gb|EHW42044.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC9A]
gi|378081367|gb|EHW43322.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC9B]
gi|378087758|gb|EHW49614.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC9C]
gi|378093776|gb|EHW55580.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC9D]
gi|378100111|gb|EHW61808.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC9E]
gi|378105223|gb|EHW66870.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC10A]
gi|378113711|gb|EHW75274.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC10B]
gi|378117135|gb|EHW78651.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC10C]
gi|378120957|gb|EHW82419.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC10D]
gi|378138110|gb|EHW99371.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC10F]
gi|386149279|gb|EIG95711.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
97.0246]
gi|386174059|gb|EIH46060.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
99.0741]
gi|386190656|gb|EIH79404.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
4.0522]
gi|386196227|gb|EIH90453.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
JB1-95]
gi|386206005|gb|EII10511.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
5.0959]
gi|386261335|gb|EIJ16800.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
900105 (10e)]
gi|388347155|gb|EIL12843.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O111:H11 str. CVM9545]
gi|388352803|gb|EIL17891.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O111:H11 str. CVM9534]
gi|388357535|gb|EIL22098.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O111:H8 str. CVM9570]
gi|388363507|gb|EIL27436.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O111:H8 str. CVM9574]
gi|388370048|gb|EIL33602.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O26:H11 str. CVM10026]
gi|388379342|gb|EIL42011.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O26:H11 str. CVM9942]
gi|388405200|gb|EIL65634.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
541-1]
gi|391253001|gb|EIQ12189.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shigella
flexneri 2850-71]
gi|391266642|gb|EIQ25591.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shigella
flexneri K-315]
gi|391287278|gb|EIQ45809.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shigella sonnei
3226-85]
gi|391287417|gb|EIQ45947.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shigella boydii
4444-74]
gi|391288144|gb|EIQ46653.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shigella sonnei
3233-85]
gi|391295943|gb|EIQ54065.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shigella sonnei
4822-66]
gi|391300999|gb|EIQ58902.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shigella
dysenteriae 225-75]
gi|394382019|gb|EJE59672.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O26:H11 str. CVM10224]
gi|394382310|gb|EJE59957.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O111:H8 str. CVM9634]
gi|394389485|gb|EJE66627.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O111:H8 str. CVM9602]
gi|394395894|gb|EJE72287.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O111:H11 str. CVM9455]
gi|394401821|gb|EJE77590.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O26:H11 str. CVM10021]
gi|394413042|gb|EJE87127.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O111:H11 str. CVM9553]
gi|394415781|gb|EJE89625.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O26:H11 str. CVM10030]
gi|394426797|gb|EJE99590.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O26:H11 str. CVM9952]
gi|397902560|gb|EJL18873.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shigella sonnei
str. Moseley]
gi|404339028|gb|EJZ65468.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shigella
flexneri 1485-80]
gi|408308799|gb|EKJ26032.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
EC1865]
gi|421942241|gb|EKT99595.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O26:H11 str. CFSAN001629]
gi|421944000|gb|EKU01262.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O111:H8 str. CFSAN001632]
gi|421950002|gb|EKU06907.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O111:H11 str. CFSAN001630]
gi|431356229|gb|ELG42920.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE101]
Length = 248
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/246 (41%), Positives = 144/246 (58%), Gaps = 7/246 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPAR+AS+R GKPLV+I GKPMI ER++ + + ++VATD E +A + G
Sbjct: 4 VVIIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGAERIIVATDHEDVARAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D ++VN+QGDEP+I II V L
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK----SGKVNPQFPYLLHL 225
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ G +L HL
Sbjct: 123 MATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAEGLETVGDNFLRHL 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI Y + F++ Y +PL+ E LEQL+VL G K+ V + + GVD PED+E+
Sbjct: 183 GIYGYRAGFIRRYVNWQASPLEHIEMLEQLRVLWYGEKIHVAVAQEVPGTGVDTPEDLER 242
Query: 285 IESFMR 290
+ + MR
Sbjct: 243 VRAEMR 248
>gi|378579126|ref|ZP_09827795.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pantoea stewartii
subsp. stewartii DC283]
gi|377818170|gb|EHU01257.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pantoea stewartii
subsp. stewartii DC283]
Length = 249
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 97/245 (39%), Positives = 144/245 (58%), Gaps = 7/245 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
+ IIPAR+AS+R GKPLV+I GKPM+ ER++ + ++VATD ++A + G
Sbjct: 4 IAIIPARYASTRLPGKPLVDIHGKPMVVHVMERAR-ESGASRVIVATDHPEVARAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT +GTER E ++K + D I+VN+QGDEP+I +I+ V L A
Sbjct: 63 GEVCMTRADHHSGTERLAEVIEKFQFADDQIIVNVQGDEPMIPADIVHQVATNLAQADAG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS--GKVNPQF--PYLLHL 225
+ + AV+ E+AF+PN VK V+D GYA+YFSR IP+++ + Q L H+
Sbjct: 123 MATLAVSITDAEEAFNPNAVKVVMDARGYALYFSRATIPWDRERYAQSREQIGDTLLRHI 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI +Y + F++ Y P PL+ E LEQL+VL G K+ V + GVD PED+ +
Sbjct: 183 GIYAYRAGFIRRYISWEPCPLEQIELLEQLRVLWYGEKIHVAVAKTIPGVGVDTPEDLTR 242
Query: 285 IESFM 289
+ + M
Sbjct: 243 VRAAM 247
>gi|451812142|ref|YP_007448596.1| 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO
synthetase) [Candidatus Kinetoplastibacterium galatii
TCC219]
gi|451778044|gb|AGF48992.1| 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO
synthetase) [Candidatus Kinetoplastibacterium galatii
TCC219]
Length = 267
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/245 (41%), Positives = 153/245 (62%), Gaps = 6/245 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
+ IIPAR +S+R GKPL +I G PMI R ++S L+ + + VATD ++I + ++G
Sbjct: 20 IVIIPARMSSTRLPGKPLKDICGLPMIVRVAQQSSLSKARE-IYVATDSQQIYDTVNKYG 78
Query: 111 ADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
I+TS++ ++GT+R +E+++ L+ K +I+VN+QGDEPLIEPEII+ V K L+ + A
Sbjct: 79 FKSIITSQNHQSGTDRLSESVKALKLKNKEIIVNVQGDEPLIEPEIINSVAKKLKNSSSA 138
Query: 170 VFSTAVTSLKPE-DAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQ 228
ST + E D + N VK V D A+YFSR IP+ + +++ + Y H+GI
Sbjct: 139 NISTCAFKINDEKDMLNKNIVKVVCDLSNNALYFSRSGIPW-INRELDNTYGY-RHIGIY 196
Query: 229 SYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAH-GVDAPEDVEKIES 287
+Y +FLK YP + L+ E LEQL+ LENGYK+ V V+ E + GVD ED+EK+
Sbjct: 197 AYKVSFLKKYPFMKKGKLERLESLEQLRALENGYKVTVDIVNREIYSGVDTLEDLEKVRD 256
Query: 288 FMRER 292
+
Sbjct: 257 IFSRK 261
>gi|398870350|ref|ZP_10625690.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas sp.
GM74]
gi|398208760|gb|EJM95464.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas sp.
GM74]
Length = 254
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/248 (40%), Positives = 147/248 (59%), Gaps = 14/248 (5%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IP+R+AS+R GKP++ I GKPMIQ WE++ ++ + +VVATDD +I E C+ FGA+
Sbjct: 8 VIPSRYASTRLPGKPMLLIAGKPMIQHVWEQAS-KSSAERVVVATDDARIVEACKGFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V++T E +GT+R E KL D IVVN+QGDEPLI P +ID V L A +A
Sbjct: 67 VVLTREDHNSGTDRLAEVAMKLGLAPDAIVVNVQGDEPLIPPSVIDQVAANLSAHTEARM 126
Query: 172 STAVTSLKPEDA---FDPNRVKCVVDNHGYAIYFSRGLIPYNKSG-KVNPQ-----FPYL 222
+T + EDA F+PN VK V D +G A+ FSR +P+ + VN + PY
Sbjct: 127 ATLAEPI--EDAQTLFNPNVVKVVSDLNGLALTFSRSTLPWARDAFAVNLEQLPEGVPYR 184
Query: 223 LHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDAPED 281
H+GI +Y + FL+ + P L+ E LEQL+ L +G ++ V + GVD ED
Sbjct: 185 RHIGIYAYRAGFLQDFVSWGPCWLENTECLEQLRALWHGVRIHVADALIAPPAGVDTAED 244
Query: 282 VEKIESFM 289
+E++ +
Sbjct: 245 LERVRRLL 252
>gi|419911771|ref|ZP_14430240.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KD1]
gi|388393081|gb|EIL54475.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KD1]
Length = 248
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 102/248 (41%), Positives = 145/248 (58%), Gaps = 11/248 (4%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPAR+AS+R GKPLV+I GKPMI ER++ + + ++VATD E +A + G
Sbjct: 4 VVIIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGAERIIVATDHEDVARAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D ++VN+QGDEP+I II V L
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSG------KVNPQFPYLL 223
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ V F L
Sbjct: 123 MATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAKDLESVGDNF--LR 180
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDV 282
HLGI Y + F++ Y P+PL+ E LEQL+VL G K+ V + + GVD PED+
Sbjct: 181 HLGIYGYRAGFIRRYVTWQPSPLEHIEMLEQLRVLWYGEKIHVAVAQEVPGTGVDTPEDL 240
Query: 283 EKIESFMR 290
+++ + MR
Sbjct: 241 KRVRAEMR 248
>gi|156934592|ref|YP_001438508.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Cronobacter
sakazakii ATCC BAA-894]
gi|389841523|ref|YP_006343607.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Cronobacter
sakazakii ES15]
gi|417789707|ref|ZP_12437328.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Cronobacter
sakazakii E899]
gi|449308779|ref|YP_007441135.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Cronobacter
sakazakii SP291]
gi|166220464|sp|A7MEV1.1|KDSB_ENTS8 RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|156532846|gb|ABU77672.1| hypothetical protein ESA_02426 [Cronobacter sakazakii ATCC BAA-894]
gi|333956215|gb|EGL73897.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Cronobacter
sakazakii E899]
gi|387851999|gb|AFK00097.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Cronobacter
sakazakii ES15]
gi|449098812|gb|AGE86846.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Cronobacter
sakazakii SP291]
Length = 248
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/246 (40%), Positives = 146/246 (59%), Gaps = 7/246 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPAR+AS+R GKPLV+I GKPMI ER++ + ++VATD +A + G
Sbjct: 4 VVIIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGAARIIVATDHPDVARAIEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D ++VN+QGDEP+I P II V + L +A
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCGFADDTVIVNVQGDEPMIPPAIIRQVAENLASAQAG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP----YLLHL 225
+ + AV ++AF+PN VK V+D GYA+YFSR IP+++ + +L H+
Sbjct: 123 MATLAVPVHDAQEAFNPNAVKVVMDAQGYALYFSRATIPWDRDRFAQSRDTIGDSFLRHI 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI Y + F++ Y +PL+ E LEQL+VL +G K+ V + GVD PED+E+
Sbjct: 183 GIYGYRAGFIRRYVTWPASPLEQIEMLEQLRVLWHGEKIHVAVAAVVPGTGVDTPEDLER 242
Query: 285 IESFMR 290
+ + MR
Sbjct: 243 VRAEMR 248
>gi|110670989|ref|YP_667546.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Francisella
tularensis subsp. tularensis FSC198]
gi|254371145|ref|ZP_04987147.1| 3-deoxy-D-manno-octulosonate cytidyltransferase [Francisella
tularensis subsp. tularensis FSC033]
gi|254875367|ref|ZP_05248077.1| kdsB, 3-deoxy-D-manno-octulosonate cytidyltransferase [Francisella
tularensis subsp. tularensis MA00-2987]
gi|255961464|ref|YP_170414.2| 3-deoxy-manno-octulosonate cytidylyltransferase [Francisella
tularensis subsp. tularensis SCHU S4]
gi|379717747|ref|YP_005306083.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Francisella
tularensis subsp. tularensis TIGB03]
gi|379726351|ref|YP_005318537.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Francisella
tularensis subsp. tularensis TI0902]
gi|385795196|ref|YP_005831602.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Francisella
tularensis subsp. tularensis NE061598]
gi|421756132|ref|ZP_16193059.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Francisella
tularensis subsp. tularensis 80700075]
gi|123169278|sp|Q14GD1.1|KDSB_FRAT1 RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|281185470|sp|Q5NEX8.2|KDSB_FRATT RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|110321322|emb|CAL09494.1| 3-deoxy-D-manno-octulosonate cytidyltransferase [Francisella
tularensis subsp. tularensis FSC198]
gi|151569385|gb|EDN35039.1| 3-deoxy-D-manno-octulosonate cytidyltransferase [Francisella
tularensis subsp. tularensis FSC033]
gi|240248243|emb|CAG46111.2| 3-deoxy-D-manno-octulosonate cytidyltransferase [Francisella
tularensis subsp. tularensis SCHU S4]
gi|254841366|gb|EET19802.1| kdsB, 3-deoxy-D-manno-octulosonate cytidyltransferase [Francisella
tularensis subsp. tularensis MA00-2987]
gi|282159731|gb|ADA79122.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Francisella
tularensis subsp. tularensis NE061598]
gi|377827800|gb|AFB81048.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Francisella
tularensis subsp. tularensis TI0902]
gi|377829424|gb|AFB79503.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Francisella
tularensis subsp. tularensis TIGB03]
gi|409085710|gb|EKM85843.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Francisella
tularensis subsp. tularensis 80700075]
Length = 250
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/246 (41%), Positives = 142/246 (57%), Gaps = 13/246 (5%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR S+R K L +I GKPMIQR +E+ + D +++ATD +KI + + FGA
Sbjct: 7 VIPARLKSTRLPNKMLADIAGKPMIQRVYEQVT-KSKFDSIIIATDSQKIKDIAKSFGAK 65
Query: 113 VIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V++T + ++GT+R EA+ KL DIVVN+QGDEPLI E I+ + L +AV
Sbjct: 66 VVLTRDDHQSGTDRIAEAVTKLGFADEDIVVNVQGDEPLIPIENIEQAAQLLIDKSEAVV 125
Query: 172 STAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF---PYLLHLGI 227
ST + ED ++PN VK V D + YA+YFSR IP+ + Q + H+GI
Sbjct: 126 STLCEKITDVEDIYNPNNVKVVFDKNNYALYFSRASIPFERGFSEKEQINISEFFRHIGI 185
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAH----GVDAPEDVE 283
+Y FLK Y L +P++ E LEQLKVL NGYK I ++ A GVD +D+E
Sbjct: 186 YAYRVAFLKHYAELTVSPIEKYEALEQLKVLYNGYK---IAIEQSAKSTPAGVDTLQDLE 242
Query: 284 KIESFM 289
K+
Sbjct: 243 KVRKLF 248
>gi|193064686|ref|ZP_03045765.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
E22]
gi|194428392|ref|ZP_03060933.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
B171]
gi|260843167|ref|YP_003220945.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O103:H2 str. 12009]
gi|415803314|ref|ZP_11500423.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
E128010]
gi|417171181|ref|ZP_12001710.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
3.2608]
gi|417180200|ref|ZP_12007908.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
93.0624]
gi|417251189|ref|ZP_12042954.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
4.0967]
gi|417622342|ref|ZP_12272662.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
STEC_H.1.8]
gi|419288501|ref|ZP_13830610.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC11A]
gi|419293808|ref|ZP_13835863.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC11B]
gi|419299219|ref|ZP_13841232.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC11C]
gi|419305510|ref|ZP_13847420.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC11D]
gi|419310548|ref|ZP_13852419.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC11E]
gi|419315835|ref|ZP_13857659.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC12A]
gi|419321783|ref|ZP_13863515.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC12B]
gi|419327914|ref|ZP_13869542.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC12C]
gi|419333436|ref|ZP_13874991.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC12D]
gi|419338753|ref|ZP_13880238.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC12E]
gi|419873156|ref|ZP_14395160.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O103:H2 str. CVM9450]
gi|420390391|ref|ZP_14889658.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
EPEC C342-62]
gi|192927743|gb|EDV82358.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
E22]
gi|194413607|gb|EDX29888.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
B171]
gi|257758314|dbj|BAI29811.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O103:H2 str. 12009]
gi|323159545|gb|EFZ45525.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
E128010]
gi|345384508|gb|EGX14370.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
STEC_H.1.8]
gi|378134886|gb|EHW96200.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC11A]
gi|378145307|gb|EHX06473.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC11B]
gi|378151989|gb|EHX13091.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC11D]
gi|378155173|gb|EHX16233.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC11C]
gi|378160263|gb|EHX21260.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC11E]
gi|378173218|gb|EHX34062.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC12B]
gi|378173927|gb|EHX34760.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC12A]
gi|378175373|gb|EHX36191.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC12C]
gi|378188672|gb|EHX49268.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC12D]
gi|378193276|gb|EHX53817.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC12E]
gi|386181105|gb|EIH58575.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
3.2608]
gi|386185555|gb|EIH68281.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
93.0624]
gi|386218038|gb|EII34521.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
4.0967]
gi|388332457|gb|EIK99128.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O103:H2 str. CVM9450]
gi|391314254|gb|EIQ71810.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
EPEC C342-62]
Length = 248
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 102/248 (41%), Positives = 144/248 (58%), Gaps = 11/248 (4%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPAR+AS+R GKPLV+I GKPMI ER++ + + ++VATD E +A + G
Sbjct: 4 VVIIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGAERIIVATDHEDVARAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D ++VN+QGDEP+I II V L
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSG------KVNPQFPYLL 223
+ + A E+AF+PN VK V+D GYA+YFSR IP+++ V F L
Sbjct: 123 MATLAAPIHNAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAKDLETVGDNF--LR 180
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDV 282
HLGI Y + F++ Y P+PL+ E LEQL+VL G K+ V + + GVD PED+
Sbjct: 181 HLGIYGYRAGFIRRYVTWQPSPLEHIEMLEQLRVLWYGEKIHVAVAQEVPGTGVDTPEDL 240
Query: 283 EKIESFMR 290
E++ + MR
Sbjct: 241 ERVRAEMR 248
>gi|410085404|ref|ZP_11282123.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Morganella
morganii SC01]
gi|409768113|gb|EKN52177.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Morganella
morganii SC01]
Length = 249
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/246 (40%), Positives = 142/246 (57%), Gaps = 7/246 (2%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR+AS+R GKPL +I GKPMI R E++KL+ ++VATD + + + G +
Sbjct: 5 IIPARYASTRLPGKPLADICGKPMIVRVMEQAKLSGAA-RVIVATDTQAVFDAVIAEGGE 63
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
MT E ++GTER E + D I+VN+QGDEPLI II V + L A+ +
Sbjct: 64 ACMTREDHQSGTERLAEVIDHYRFADDEIIVNVQGDEPLIPDSIIAQVAENLAASEAGMA 123
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP----YLLHLGI 227
+ AV EDAF+PN VK V+D GYA+YFSR IP+++ ++ + +L H+GI
Sbjct: 124 TLAVKITSAEDAFNPNAVKVVMDKQGYALYFSRATIPWDRERFMHSRDSTGDNFLRHIGI 183
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHE-AHGVDAPEDVEKIE 286
+Y + F++ Y +PL+ E LEQL+VL G K+ V + GVD PED+E +
Sbjct: 184 YAYRAGFIRRYIQWETSPLEKIEMLEQLRVLWYGEKIHVAEASEAPGTGVDTPEDLETVR 243
Query: 287 SFMRER 292
R
Sbjct: 244 RLFAAR 249
>gi|386021352|ref|YP_005939376.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
stutzeri DSM 4166]
gi|327481324|gb|AEA84634.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
stutzeri DSM 4166]
Length = 254
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/246 (38%), Positives = 144/246 (58%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+AS+R GKPL +I GKPMI+ WE+++ + +V+ATDD++I + C FGA+
Sbjct: 8 VIPARYASTRLPGKPLQDIAGKPMIRHVWEQAR-KSAAQRVVIATDDQRIVDACTAFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V++T +GT+R E ++L D IVVN+QGDEP+I P +ID V L P+A
Sbjct: 67 VVLTRAEHNSGTDRLAEVAEQLGLPGDAIVVNVQGDEPMIPPAVIDQVAANLADHPEAAI 126
Query: 172 STAVTSLKPEDA-FDPNRVKCVVDNHGYAIYFSRGLIPYNKS------GKVNPQFPYLLH 224
+T L A F+PN VK + D +G A+ FSR +P+ + ++ P PY H
Sbjct: 127 ATLAEPLADAQALFNPNVVKVLSDINGLALTFSRAPLPWARDSFAVDRSQLPPGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDAPEDVE 283
+GI +Y + FL + P L+ E LEQL+ L +G ++ V V+ GVD ED++
Sbjct: 187 IGIYAYRAGFLADFVSWGPCWLEDTECLEQLRALWHGRRIHVADAVEAPPAGVDTAEDLD 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|91210019|ref|YP_540005.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
UTI89]
gi|110641115|ref|YP_668845.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
536]
gi|191172078|ref|ZP_03033622.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
F11]
gi|218557823|ref|YP_002390736.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
S88]
gi|218688761|ref|YP_002396973.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
ED1a]
gi|237707094|ref|ZP_04537575.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia sp.
3_2_53FAA]
gi|300983096|ref|ZP_07176440.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 200-1]
gi|312969016|ref|ZP_07783223.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
2362-75]
gi|386598696|ref|YP_006100202.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
IHE3034]
gi|386605171|ref|YP_006111471.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
UM146]
gi|417083419|ref|ZP_11951514.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
cloneA_i1]
gi|417288759|ref|ZP_12076044.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
TW07793]
gi|417754819|ref|ZP_12402910.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC2B]
gi|418995800|ref|ZP_13543407.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC1A]
gi|419001184|ref|ZP_13548735.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC1B]
gi|419006674|ref|ZP_13554127.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC1C]
gi|419012519|ref|ZP_13559882.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC1D]
gi|419017517|ref|ZP_13564836.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC1E]
gi|419023110|ref|ZP_13570351.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC2A]
gi|419027978|ref|ZP_13575170.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC2C]
gi|419033690|ref|ZP_13580786.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC2D]
gi|419038786|ref|ZP_13585839.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC2E]
gi|419945109|ref|ZP_14461564.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
HM605]
gi|422358652|ref|ZP_16439303.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 110-3]
gi|422375736|ref|ZP_16455999.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 60-1]
gi|422753540|ref|ZP_16807367.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
H263]
gi|422839399|ref|ZP_16887371.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
H397]
gi|432361677|ref|ZP_19604861.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE5]
gi|432470282|ref|ZP_19712334.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE206]
gi|432552918|ref|ZP_19789647.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE47]
gi|432572899|ref|ZP_19809389.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE55]
gi|432587186|ref|ZP_19823553.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE58]
gi|432596800|ref|ZP_19833081.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE62]
gi|432712572|ref|ZP_19947621.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE8]
gi|432753673|ref|ZP_19988239.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE22]
gi|432777813|ref|ZP_20012063.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE59]
gi|432786602|ref|ZP_20020766.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE65]
gi|432820178|ref|ZP_20053891.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE118]
gi|432826409|ref|ZP_20060064.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE123]
gi|433004386|ref|ZP_20192824.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE227]
gi|433077074|ref|ZP_20263635.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE131]
gi|433153013|ref|ZP_20337978.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE176]
gi|433167767|ref|ZP_20352432.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE180]
gi|91071593|gb|ABE06474.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
UTI89]
gi|110342707|gb|ABG68944.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
536]
gi|190907605|gb|EDV67200.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
F11]
gi|218364592|emb|CAR02278.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
S88]
gi|218426325|emb|CAR07150.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
ED1a]
gi|226898304|gb|EEH84563.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia sp.
3_2_53FAA]
gi|294492267|gb|ADE91023.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
IHE3034]
gi|300307000|gb|EFJ61520.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 200-1]
gi|307627655|gb|ADN71959.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
UM146]
gi|312286418|gb|EFR14331.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
2362-75]
gi|315287555|gb|EFU46961.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 110-3]
gi|323958223|gb|EGB53932.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
H263]
gi|324012945|gb|EGB82164.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 60-1]
gi|355352835|gb|EHG02009.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
cloneA_i1]
gi|371609931|gb|EHN98464.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
H397]
gi|377847790|gb|EHU12787.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC1A]
gi|377849750|gb|EHU14719.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC1C]
gi|377852532|gb|EHU17451.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC1B]
gi|377861837|gb|EHU26653.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC1D]
gi|377865973|gb|EHU30763.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC1E]
gi|377868120|gb|EHU32869.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC2A]
gi|377878262|gb|EHU42850.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC2B]
gi|377882867|gb|EHU47398.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC2D]
gi|377884105|gb|EHU48622.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC2C]
gi|377897247|gb|EHU61630.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
DEC2E]
gi|386247551|gb|EII93724.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
TW07793]
gi|388416599|gb|EIL76481.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
HM605]
gi|430889567|gb|ELC12228.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE5]
gi|430999460|gb|ELD15542.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE206]
gi|431085635|gb|ELD91739.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE47]
gi|431110107|gb|ELE14034.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE55]
gi|431122896|gb|ELE25648.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE58]
gi|431132585|gb|ELE34584.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE62]
gi|431258705|gb|ELF51468.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE8]
gi|431304909|gb|ELF93433.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE22]
gi|431330002|gb|ELG17287.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE59]
gi|431340648|gb|ELG27669.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE65]
gi|431370434|gb|ELG56235.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE118]
gi|431374193|gb|ELG59788.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE123]
gi|431517707|gb|ELH95229.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE227]
gi|431600034|gb|ELI69711.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE131]
gi|431677686|gb|ELJ43760.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE176]
gi|431692738|gb|ELJ58162.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE180]
Length = 248
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 102/248 (41%), Positives = 145/248 (58%), Gaps = 11/248 (4%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPAR+AS+R GKPLV+I GKPMI ER++ + + ++VATD E +A + G
Sbjct: 4 VVIIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGAERIIVATDHEDVARAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D ++VN+QGDEP+I II V L
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSG------KVNPQFPYLL 223
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ V F L
Sbjct: 123 MATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAKDLETVGDNF--LR 180
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDV 282
HLGI Y + F++ Y P+PL+ E LEQL+VL G K+ V + + GVD PED+
Sbjct: 181 HLGIYGYRAGFIRRYVTWQPSPLEHIEMLEQLRVLWYGEKIHVAVAQEVPGTGVDTPEDL 240
Query: 283 EKIESFMR 290
+++ + MR
Sbjct: 241 KRVRAEMR 248
>gi|398995358|ref|ZP_10698243.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas sp.
GM21]
gi|398130154|gb|EJM19502.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas sp.
GM21]
Length = 254
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 98/246 (39%), Positives = 142/246 (57%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IP+R+AS+R GKPL+ I GKPMIQ WE++ ++ +VVATDD +I E C FGA+
Sbjct: 8 VIPSRYASTRLPGKPLLLIAGKPMIQHVWEQAS-KSSAQRVVVATDDARIVEACNGFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V++T E +GT+R E KL D IVVN+QGDEPLI P +ID V L A +A
Sbjct: 67 VVLTREDHNSGTDRLAEVATKLGLAPDAIVVNVQGDEPLIPPSVIDQVAANLAAHTEARM 126
Query: 172 STAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSG------KVNPQFPYLLH 224
+T ++ E F+PN VK V D +G A+ FSR +P+ + ++ PY H
Sbjct: 127 ATLAEPIEDVETLFNPNVVKVVSDLNGLALTFSRATLPWARDAFAQSREQLPEGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDAPEDVE 283
+GI +Y + FL + P L+ E LEQL+ L +G ++ V + GVD ED+E
Sbjct: 187 IGIYAYRAGFLHDFVSWGPCWLENTESLEQLRALWHGVRIHVADALIAPPTGVDTVEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|307256106|ref|ZP_07537893.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|306865287|gb|EFM97183.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
Length = 260
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/259 (38%), Positives = 146/259 (56%), Gaps = 13/259 (5%)
Query: 39 YLGRSKNFRSRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATD 98
Y G NF IIPAR+ASSR KPL++I GKPMIQ WE+++ A +++ATD
Sbjct: 6 YKGNCMNF----TVIIPARYASSRLPRKPLLDIAGKPMIQHVWEKAQQAGA-TRVIIATD 60
Query: 99 DEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIID 157
+I + FGA+V MTS+ +GTER E ++K++ +I+VN+QGDEPLI P I+
Sbjct: 61 HPEIEATAKAFGAEVCMTSDQHNSGTERLAEVIEKMQIADNEIIVNVQGDEPLIPPVIVS 120
Query: 158 GVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS--GKV 215
V + L + + AV E+ F+PN VK + D +G A+YFSR IP+ +
Sbjct: 121 QVAENLDRCQVNMATLAVKLTTKEELFNPNAVKALADKNGMALYFSRAPIPFARDHFADC 180
Query: 216 NPQF----PYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDH 271
+ F YL H+GI +Y + F+K Y PT L+ E LEQL+ L G K+ +
Sbjct: 181 DDAFVASQNYLRHIGIYAYRAGFVKQYVAWQPTQLEQLESLEQLRALWYGEKIHIELAKQ 240
Query: 272 EAH-GVDAPEDVEKIESFM 289
GVD ED+E++ +
Sbjct: 241 APQVGVDTQEDLERVRRIL 259
>gi|117623136|ref|YP_852049.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
APEC O1]
gi|422748031|ref|ZP_16801944.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
H252]
gi|433011641|ref|ZP_20200045.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE229]
gi|433162756|ref|ZP_20347515.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE179]
gi|115512260|gb|ABJ00335.1| KdsB [Escherichia coli APEC O1]
gi|323953374|gb|EGB49240.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
H252]
gi|431518256|gb|ELH95776.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE229]
gi|431691426|gb|ELJ56886.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE179]
Length = 248
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 102/248 (41%), Positives = 145/248 (58%), Gaps = 11/248 (4%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPAR+AS+R GKPLV+I GKPMI ER++ + + ++VATD E +A + G
Sbjct: 4 VVIIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGAERIIVATDHEDVARAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D ++VN+QGDEP+I II V L
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSG------KVNPQFPYLL 223
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ V F L
Sbjct: 123 MATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAKDLETVGDNF--LR 180
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDV 282
HLGI Y + F++ Y P+PL+ E LEQL+VL G K+ V + + GVD PED+
Sbjct: 181 HLGIYGYRAGFIRRYVTWQPSPLEHIEILEQLRVLWYGEKIHVAVAQEVPGTGVDTPEDL 240
Query: 283 EKIESFMR 290
+++ + MR
Sbjct: 241 KRVRAEMR 248
>gi|54309549|ref|YP_130569.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Photobacterium
profundum SS9]
gi|81615131|sp|Q6LPK9.1|KDSB_PHOPR RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|46913985|emb|CAG20767.1| putative 3-deoxy-manno-octulosonate cytidylyltransferase
[Photobacterium profundum SS9]
Length = 248
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 100/244 (40%), Positives = 145/244 (59%), Gaps = 9/244 (3%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ S+R GKPL +I GKPM+Q +E++ A D ++VATDD++I + + FG +
Sbjct: 6 VIPARYQSTRLPGKPLADIGGKPMVQWVYEQASKAGA-DLVIVATDDQRIVDAVKAFGGE 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V +T + +GTER E ++K + D IVVN+QGDEPLI II V L A +A
Sbjct: 65 VCLTRDDHESGTERLAEVVEKYQLADDHIVVNVQGDEPLIPDTIIRQVADNL-ANNNAPM 123
Query: 172 STAVTSLKPED-AFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNP----QFPYLLHLG 226
+T + ED F+PN VK V+D GYA+YFSR IP+++ L H+G
Sbjct: 124 ATLGVEIDHEDEVFNPNAVKVVLDKDGYAMYFSRASIPWDRDNYAKSPKEIHHNLLRHVG 183
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKI 285
I +Y + F+ Y P+ L+ E LEQL+VL G K+ V + +D GVD PED+EK+
Sbjct: 184 IYAYRAGFINTYINWEPSALEKVEALEQLRVLWYGEKIHVAVAIDAPPAGVDTPEDLEKV 243
Query: 286 ESFM 289
+ +
Sbjct: 244 RALI 247
>gi|395009113|ref|ZP_10392680.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Acidovorax sp.
CF316]
gi|394312798|gb|EJE49908.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Acidovorax sp.
CF316]
Length = 264
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 97/251 (38%), Positives = 141/251 (56%), Gaps = 15/251 (5%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR ASSR KPL +I G PM+ R +R+ L+ +VVA DD ++ CQ G
Sbjct: 14 VIPARMASSRLPDKPLADIAGLPMVVRVAQRAALSGAA-RVVVAADDARVLHACQAHGVP 72
Query: 113 VIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
I+T +G++R EA ++L DIVVN+QGDEPL++ +ID V L A P+A
Sbjct: 73 AILTRTDHASGSDRLAEACEQLGLAGDDIVVNVQGDEPLMDASLIDAVAALLPARPEASM 132
Query: 172 STAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK-----------SGKVNPQF 219
TA ++ D +PN VK V+D G A YFSR IP+ + +G V F
Sbjct: 133 GTAAHTIHTLADYENPNVVKVVLDARGLAHYFSRAPIPWARDHAGTAWWESATGAVPAGF 192
Query: 220 PYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHE-AHGVDA 278
L H+GI SY + FL+ +P L P ++ E LEQL+ L +G+++ V D GVD
Sbjct: 193 APLRHIGIYSYRAGFLRAFPTLSQAPTEVMEALEQLRALWHGHRIAVHVTDTAPGPGVDT 252
Query: 279 PEDVEKIESFM 289
P+D+E++ + +
Sbjct: 253 PQDLERVRALL 263
>gi|392532573|ref|ZP_10279710.1| CTP:CMP-3-deoxy-D-manno-octulosonate transferase [Pseudoalteromonas
arctica A 37-1-2]
Length = 253
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 105/253 (41%), Positives = 158/253 (62%), Gaps = 12/253 (4%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V +IPARFAS+R GKPL +I GKPM+Q +E++ L+ +V+ATD +K+ + F
Sbjct: 4 VVVIPARFASTRLPGKPLADICGKPMVQHVYEKACLSGA-SKVVIATDHQKVFDAVSLFT 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKAL--QAAP 167
+DV+MT E ++GTER E + L+ D IVVN+QGDEPL+ PE + V L AP
Sbjct: 63 SDVVMTREDHQSGTERLAEVVDLLDLDSDTIVVNVQGDEPLLAPENVSQVAALLSDSTAP 122
Query: 168 DAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ-----FPYL 222
A S A+ + ++ F+PN VK V D + A+YFSR IP+++S +N P+
Sbjct: 123 MATLSVAIE--ERDEVFNPNAVKVVSDINKNALYFSRASIPFDRSTMMNDSSALNLAPFQ 180
Query: 223 LHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAH-GVDAPED 281
H+GI +Y + F+K Y L +PL+L E LEQL+VL +GYK+K+ + H GVD P+D
Sbjct: 181 RHVGIYAYRAGFIKQYIELSVSPLELLESLEQLRVLYHGYKIKIEQAQIAPHAGVDTPDD 240
Query: 282 VEKIESFMRERNL 294
+ K+ + ++ +N+
Sbjct: 241 LAKVIAHIKSKNV 253
>gi|398928240|ref|ZP_10663349.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas sp.
GM48]
gi|398168659|gb|EJM56665.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas sp.
GM48]
Length = 254
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 100/246 (40%), Positives = 146/246 (59%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IP+R+AS+R GKPL+ I GKPMIQ WE++ ++ + +VVATDD +I E C+ FGA+
Sbjct: 8 VIPSRYASTRLPGKPLLLIAGKPMIQHVWEQAS-KSSAERVVVATDDARIIEACKGFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V++T E +GT+R E KL D IVVN+QGDEPLI P +ID V L A +A
Sbjct: 67 VVLTREDHNSGTDRLAEVAMKLGLAPDAIVVNVQGDEPLIPPSVIDQVAANLAAHTEARM 126
Query: 172 STAVTSLKPEDA-FDPNRVKCVVDNHGYAIYFSRGLIPYNKSG-KVNPQ-----FPYLLH 224
+T ++ D F+PN VK V D +G A+ FSR +P+ + VN + PY H
Sbjct: 127 ATLAEPIEDVDTLFNPNVVKVVSDLNGLALTFSRSTLPWARDAFAVNREQLPEGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDAPEDVE 283
+GI +Y + FL+ + P L+ E LEQL+ L +G ++ V + GVD ED+E
Sbjct: 187 IGIYAYRAGFLQDFVSWGPCWLENTECLEQLRALWHGVRIHVADALVALPAGVDTIEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|422806026|ref|ZP_16854458.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia
fergusonii B253]
gi|324113751|gb|EGC07726.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia
fergusonii B253]
Length = 248
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 100/246 (40%), Positives = 144/246 (58%), Gaps = 7/246 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPARFAS+R GKPL++I GKPMI ER++ + + ++VATD E +A + G
Sbjct: 4 VVIIPARFASTRLPGKPLLDINGKPMIVHVLERAR-ESGAERIIVATDHEDVARAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D ++VN+QGDEP+I II V + L
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCGFSDDTVIVNVQGDEPMIPAVIIRQVAENLAQRQVG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS----GKVNPQFPYLLHL 225
+ + A E+AF+PN VK V+D+ GYA+YFSR IP+++ G +L HL
Sbjct: 123 MATLAAPVHSAEEAFNPNVVKVVIDSEGYALYFSRATIPWDRDRFAKGLETVGDNFLRHL 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDH-EAHGVDAPEDVEK 284
GI Y + F++ Y P+PL+ E LEQL+VL G K+ V + GVD ED+E+
Sbjct: 183 GIYGYRAGFIRRYVNWQPSPLEHIEMLEQLRVLWYGEKIHVAVAEQVPGTGVDTAEDLER 242
Query: 285 IESFMR 290
+ + MR
Sbjct: 243 VRAEMR 248
>gi|187929878|ref|YP_001900365.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Ralstonia
pickettii 12J]
gi|226724323|sp|B2UB84.1|KDSB_RALPJ RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|187726768|gb|ACD27933.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Ralstonia
pickettii 12J]
Length = 268
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 97/256 (37%), Positives = 142/256 (55%), Gaps = 16/256 (6%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
+ +IPAR AS+R KPL +I GKPM+ R ER+ ++ +VVATD +A+ C Q
Sbjct: 7 IAVIPARLASTRLPNKPLADIDGKPMVVRVAERAHQSSAA-RVVVATDAASVADACMQHH 65
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+ ++T +GT+R E L D IVVN+QGDEPLI P +ID V L+ PD
Sbjct: 66 VEAVLTRADHASGTDRLAEVATVLGLPDDAIVVNVQGDEPLIAPTLIDNVAAHLRDHPDC 125
Query: 170 VFSTAVTSLK-PEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK--------SGKVN---- 216
+TA + P D F+PN VK V+D A+ FSR +P+ + +G V
Sbjct: 126 AIATAAHPIHDPADVFNPNVVKVVLDAADRALLFSRAPLPWARDTWTPAVMAGSVAERPL 185
Query: 217 PQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHE-AHG 275
P P L H+GI +Y + FL+ +P L P++ E LEQL+ + +G ++ V+ D A G
Sbjct: 186 PAMPVLRHIGIYAYRAGFLRRFPQLAAAPIEQTEQLEQLRAMWHGERIAVLTTDDAPAAG 245
Query: 276 VDAPEDVEKIESFMRE 291
VD PED+ ++ + E
Sbjct: 246 VDTPEDLTRVRAAWAE 261
>gi|451985383|ref|ZP_21933605.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
aeruginosa 18A]
gi|451757000|emb|CCQ86128.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
aeruginosa 18A]
Length = 254
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 96/246 (39%), Positives = 137/246 (55%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+AS+R GKPL +I G+PMIQR W +++ + +VVATDDE+I CQ FGA+
Sbjct: 8 VIPARYASTRLPGKPLQDIAGQPMIQRVWNQAR-KSAASRVVVATDDERILAACQGFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
++T +GT+R E +L D IVVN+QGDEPLI P +ID V L P+A
Sbjct: 67 ALLTRAEHNSGTDRLEEVASRLGLASDAIVVNVQGDEPLIPPALIDQVAANLAVHPEAAI 126
Query: 172 STAVTSLKPEDA-FDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ------FPYLLH 224
+T + A F+PN VK D G A+ FSR +P+ + + PY H
Sbjct: 127 ATLAEPIHEVSALFNPNVVKVATDIDGLALTFSRAPLPWARDAFARDRDSLPEGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKV-DHEAHGVDAPEDVE 283
+GI +Y FL + P L+ E LEQL+ L +G ++ V + GVD PED+E
Sbjct: 187 IGIYAYRVGFLADFVAWGPCWLENAESLEQLRALWHGVRIHVADARETMLPGVDTPEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRVL 252
>gi|359443595|ref|ZP_09233431.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudoalteromonas
sp. BSi20429]
gi|358034641|dbj|GAA69680.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudoalteromonas
sp. BSi20429]
Length = 253
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 105/253 (41%), Positives = 159/253 (62%), Gaps = 12/253 (4%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V +IPARFAS+R GKPL +I GKPM+Q +E++ L+ +V+ATD +K+ + + F
Sbjct: 4 VVVIPARFASTRLPGKPLADICGKPMVQHVYEKACLSGA-SKVVIATDHQKVFDAVRLFT 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKAL--QAAP 167
+DV+MT E ++GTER E + LE + IVVN+QGDEPL+ PE + V L AP
Sbjct: 63 SDVVMTREDHQSGTERLAEVVDLLELDSNTIVVNVQGDEPLLAPENVSQVAALLSDSTAP 122
Query: 168 DAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ-----FPYL 222
A S A+ + ++ F+PN VK V D + A+YFSR IP+++S +N P+
Sbjct: 123 MATLSVAIE--ERDEVFNPNAVKVVSDINKNALYFSRASIPFDRSTMMNDSSALNLAPFQ 180
Query: 223 LHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAH-GVDAPED 281
H+GI +Y + F+K Y L +PL+L E LEQL+VL +GYK+K+ + H GVD P+D
Sbjct: 181 RHVGIYAYRAGFIKQYIELSVSPLELLESLEQLRVLYHGYKIKIEQAQIAPHAGVDTPDD 240
Query: 282 VEKIESFMRERNL 294
+ K+ + ++ +N+
Sbjct: 241 LAKVIAHIKSKNV 253
>gi|99079855|ref|YP_612009.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Ruegeria sp.
TM1040]
gi|99036135|gb|ABF62747.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Ruegeria sp.
TM1040]
Length = 266
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 101/261 (38%), Positives = 147/261 (56%), Gaps = 20/261 (7%)
Query: 50 VVGIIPARFASSRFEGKPLVNILG-----KPMIQRTWERSKLATTLDHLVVATDDEKIAE 104
V+ +IPAR+AS+RF GKPL + G + +I+R+W + +D +VVATDD++I
Sbjct: 3 VLIVIPARYASTRFPGKPLAELTGATGKTRSLIERSWRAACAVNGVDRVVVATDDDRIKA 62
Query: 105 CCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQ 164
+ FGA+V+MTSE+C NGTERC EA L Y++VVN+QGD PL P I+ ++ LQ
Sbjct: 63 ASETFGAEVVMTSETCANGTERCAEAHAALGGGYEVVVNLQGDAPLTPPWFIEDLINGLQ 122
Query: 165 AAPDAVFSTAV---------TSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKV 215
AA +T V + L+ A V A+YFS+ +IP+ +SG+
Sbjct: 123 AAEGMGLATPVLRCDGATLNSLLEDRRAGRVGGTTAVFGADHSALYFSKEVIPF-QSGRY 181
Query: 216 NPQ--FPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVD--- 270
+ P H+G+ +Y + L YP PL+ E LEQL+ LENG K+ ++VD
Sbjct: 182 SDAECTPVFHHVGVYAYRPDALLAYPTWPVGPLETLEGLEQLRFLENGRKILCVEVDARG 241
Query: 271 HEAHGVDAPEDVEKIESFMRE 291
E ++ PED KIE MR+
Sbjct: 242 REFWELNNPEDRPKIEEMMRK 262
>gi|307247064|ref|ZP_07529117.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|307251607|ref|ZP_07533513.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|307262668|ref|ZP_07544297.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
gi|306856433|gb|EFM88583.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|306860918|gb|EFM92925.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|306871996|gb|EFN03711.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
Length = 260
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 101/259 (38%), Positives = 146/259 (56%), Gaps = 13/259 (5%)
Query: 39 YLGRSKNFRSRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATD 98
Y G NF IIPAR+ASSR KPL++I GKPMIQ WE+++ A +++ATD
Sbjct: 6 YKGNVMNFTV----IIPARYASSRLPRKPLLDIAGKPMIQHVWEKAQQAGA-TRVIIATD 60
Query: 99 DEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIID 157
+I + FGA+V MTS+ +GTER E ++K++ +I+VN+QGDEPLI P I+
Sbjct: 61 HPEIEATAKAFGAEVCMTSDQHNSGTERLAEVIEKMQIADNEIIVNVQGDEPLIPPVIVS 120
Query: 158 GVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS--GKV 215
V + L + + AV E+ F+PN VK + D +G A+YFSR IP+ +
Sbjct: 121 QVAENLDRCQVNMATLAVKLTTKEELFNPNAVKALADKNGMALYFSRAPIPFARDHFADC 180
Query: 216 NPQF----PYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDH 271
+ F YL H+GI +Y + F+K Y PT L+ E LEQL+ L G K+ +
Sbjct: 181 DDAFVASQNYLRHIGIYAYRAGFVKQYVAWQPTQLEQLESLEQLRALWYGEKIHIELAKQ 240
Query: 272 EAH-GVDAPEDVEKIESFM 289
GVD ED+E++ +
Sbjct: 241 APQVGVDTQEDLERVRRIL 259
>gi|90413114|ref|ZP_01221111.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Photobacterium
profundum 3TCK]
gi|90325957|gb|EAS42403.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Photobacterium
profundum 3TCK]
Length = 248
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 100/244 (40%), Positives = 144/244 (59%), Gaps = 9/244 (3%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ S+R GKPL +I GKPM+Q +E++ A D ++VATDD++I + + FG +
Sbjct: 6 VIPARYQSTRLPGKPLADIGGKPMVQWVYEQASKAGA-DLVIVATDDQRIVDAVKAFGGE 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V +T +GTER E ++K + D IVVN+QGDEPLI II V L A +A
Sbjct: 65 VCLTRNDHESGTERLAEVVEKYQLADDHIVVNVQGDEPLIPDTIIRQVADNL-ANNNAPM 123
Query: 172 STAVTSLKPED-AFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNP----QFPYLLHLG 226
+T + ED F+PN VK V+D GYA+YFSR IP+++ L H+G
Sbjct: 124 ATLGVEIDHEDEVFNPNAVKVVLDKDGYAMYFSRASIPWDRDNYAKSPKEIHHNLLRHIG 183
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKI 285
I +Y + F+ Y P+ L+ E LEQL+VL G K+ V + +D GVD PED+EK+
Sbjct: 184 IYAYRAGFINTYINWEPSALEKVEALEQLRVLWYGEKIHVAVAIDAPPAGVDTPEDLEKV 243
Query: 286 ESFM 289
+ +
Sbjct: 244 RALI 247
>gi|431926822|ref|YP_007239856.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas
stutzeri RCH2]
gi|431825109|gb|AGA86226.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas
stutzeri RCH2]
Length = 254
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 97/246 (39%), Positives = 141/246 (57%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+AS+R GKPL +I GKPMI+ WE++ + +VVATDD +I E C FGA
Sbjct: 8 VIPARYASTRLPGKPLQDIAGKPMIRHVWEQAS-KSGAQRVVVATDDSRIVEACSAFGAQ 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V++T +GT+R E ++L D IVVN+QGDEPLI P +ID V L A P+A
Sbjct: 67 VVLTRADHNSGTDRLAEVAEQLGLPGDAIVVNVQGDEPLIPPAVIDQVAANLAAHPEAAI 126
Query: 172 STAVTSLKPEDA-FDPNRVKCVVDNHGYAIYFSRGLIPYNKS------GKVNPQFPYLLH 224
+T L A F+PN VK + D G A+ FSR +P+ + ++ PY H
Sbjct: 127 ATLAEPLTDAQALFNPNVVKVLSDVDGLALTFSRAPLPWARDSFAADRSQLPEGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDAPEDVE 283
+GI +Y ++FL + P L+ E LEQL+ L +G ++ V ++ GVD ED+E
Sbjct: 187 IGIYAYRASFLADFVSWGPCWLEDTECLEQLRALWHGRRIHVADAIEAPPAGVDTAEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|417706593|ref|ZP_12355646.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shigella
flexneri VA-6]
gi|420330240|ref|ZP_14831931.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shigella
flexneri K-1770]
gi|333006361|gb|EGK25869.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shigella
flexneri VA-6]
gi|391257237|gb|EIQ16356.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shigella
flexneri K-1770]
Length = 248
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 101/246 (41%), Positives = 144/246 (58%), Gaps = 7/246 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPAR+AS+R GKPLV+I GKPMI ER++ + + ++VATD E +A + G
Sbjct: 4 VVIIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGAERIIVATDHEDVARAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D ++VN+QGDEP+I II V L
Sbjct: 63 GEVCMTRADHQSGTERLVEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK----SGKVNPQFPYLLHL 225
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ G +L HL
Sbjct: 123 MATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAEGLETVGDNFLRHL 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI Y + F++ Y +PL+ E LEQL+VL G K+ V + + GVD PED+E+
Sbjct: 183 GIYGYRAGFIRRYVNWQASPLEHIEMLEQLRVLWYGEKIHVAVAQEVPGTGVDTPEDLER 242
Query: 285 IESFMR 290
+ + MR
Sbjct: 243 VRAEMR 248
>gi|339494692|ref|YP_004714985.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
stutzeri ATCC 17588 = LMG 11199]
gi|338802064|gb|AEJ05896.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
stutzeri ATCC 17588 = LMG 11199]
Length = 254
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 94/246 (38%), Positives = 144/246 (58%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+AS+R GKPL +I GKPMI+ WE+++ + +V+ATDD++I + C FGA+
Sbjct: 8 VIPARYASTRLPGKPLQDIAGKPMIRHVWEQAR-KSAAQRVVIATDDQRIVDACTAFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V++T +GT+R E ++L D IVVN+QGDEP+I P +ID V L P+A
Sbjct: 67 VVLTRAEHNSGTDRLAEVAEQLGLPGDAIVVNVQGDEPMIPPAVIDQVAANLADHPEAAI 126
Query: 172 STAVTSLKPEDA-FDPNRVKCVVDNHGYAIYFSRGLIPYNKS------GKVNPQFPYLLH 224
+T L A F+PN VK + D +G A+ FSR +P+ + ++ P PY H
Sbjct: 127 ATLAEPLADAQALFNPNVVKVLSDINGLALTFSRAPLPWARDSFAVDRSQLPPGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDAPEDVE 283
+GI +Y + FL + P L+ E LEQL+ L +G ++ V V+ GVD ED++
Sbjct: 187 IGIYAYRAEFLADFVSWGPCWLEDTECLEQLRALWHGRRIHVADAVETPPAGVDTAEDLD 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|307244887|ref|ZP_07526985.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|306854209|gb|EFM86416.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
Length = 260
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 102/259 (39%), Positives = 146/259 (56%), Gaps = 13/259 (5%)
Query: 39 YLGRSKNFRSRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATD 98
Y G NF IIPAR+ASSR KPL++I GKPMIQ WE+++ A +++ATD
Sbjct: 6 YKGNCMNFTV----IIPARYASSRLPRKPLLDIAGKPMIQHVWEKAQQAGA-TRVIIATD 60
Query: 99 DEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIID 157
+I + FGA+V MTS+ +GTER E ++K++ D I+VN+QGDEPLI P I+
Sbjct: 61 HPEIEATAKAFGAEVCMTSDQHNSGTERLAEVIEKMQIADDEIIVNVQGDEPLIPPVIVS 120
Query: 158 GVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS--GKV 215
V + L + + AV E+ F+PN VK + D +G A+YFSR IP+ +
Sbjct: 121 QVAENLDRCQVNMATLAVKLTTKEELFNPNAVKALADKNGMALYFSRAPIPFARDHFADC 180
Query: 216 NPQF----PYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDH 271
+ F YL H+GI +Y + F+K Y PT L+ E LEQL+ L G K+ +
Sbjct: 181 DDAFVASQNYLRHIGIYAYCAGFVKQYVAWQPTQLEQLESLEQLRALWYGEKIHIELAKQ 240
Query: 272 EAH-GVDAPEDVEKIESFM 289
GVD ED+E++ +
Sbjct: 241 APQVGVDTQEDLERVRRIL 259
>gi|119478438|ref|ZP_01618423.1| 3-deoxy-manno-octulosonate cytidylyltransferase [marine gamma
proteobacterium HTCC2143]
gi|119448524|gb|EAW29771.1| 3-deoxy-manno-octulosonate cytidylyltransferase [marine gamma
proteobacterium HTCC2143]
Length = 250
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 98/248 (39%), Positives = 145/248 (58%), Gaps = 14/248 (5%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPARFAS+R GKPL++I GKPMIQR +E++ + + +V+ATDD++IA + FGA+
Sbjct: 6 VIPARFASTRLPGKPLLDIAGKPMIQRVYEQA-CKSRAERIVIATDDDRIASVVRAFGAE 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS S +GT+R E + +L D IVVN+QGDEPLI P +I+ V L +A
Sbjct: 65 VSMTSSSHESGTDRLQEVVTQLSFSPDHIVVNVQGDEPLIPPAVINQVAAVLSEHAEAAI 124
Query: 172 STAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS--GKVNPQFP----YLLH 224
+T V + E FDPN VK + G A+YFSR IP+++ P P + H
Sbjct: 125 ATLVEPINDVETIFDPNAVKVTMTAQGRALYFSRAPIPWSRDHFSDKAPSLPTDVVFYRH 184
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI---KVDHEAHGVDAPED 281
+GI +Y + FL + P+ L++ E LEQL+ LE G M +I ++ G+D +D
Sbjct: 185 IGIYAYKTEFLHRFVQWSPSRLEVTEKLEQLRALEQG--MTIIADAACEYIPAGIDTEKD 242
Query: 282 VEKIESFM 289
+ + +
Sbjct: 243 LNAVRALF 250
>gi|432720090|ref|ZP_19955055.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE9]
gi|431260913|gb|ELF53004.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE9]
Length = 246
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 89/242 (36%), Positives = 144/242 (59%), Gaps = 5/242 (2%)
Query: 48 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQ 107
S+ V +IPAR+ SSR GKPL++I+GKPMIQ +ER+ + + VATDD+++ + Q
Sbjct: 2 SKAVIVIPARYGSSRLPGKPLLDIVGKPMIQHVYERALQVAGVAEVWVATDDQRVEKAVQ 61
Query: 108 QFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
FG IMT +GT+R E + K+E DI +N+QGDEP+I P ++ +++ ++ P
Sbjct: 62 AFGGKAIMTRNDHESGTDRLVEVMHKVEA--DIYINLQGDEPMIRPRDVETLLQGMRDDP 119
Query: 168 DAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+T ++ E+A +P+ VK VV+ A+YFSR IPY ++ + + YL H+GI
Sbjct: 120 ALPVATLCHAISAEEATEPSTVKVVVNTRQDALYFSRSPIPYPRNAE---KARYLKHVGI 176
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
+Y + L+ Y L + + E LEQL+++ G ++ +V GVD P +EK+ +
Sbjct: 177 YAYRRDVLQNYSQLPESMQEQAESLEQLRLMSAGINIRTFEVAATGPGVDTPACLEKVRA 236
Query: 288 FM 289
M
Sbjct: 237 LM 238
>gi|307249286|ref|ZP_07531281.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
gi|306858685|gb|EFM90746.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
Length = 260
Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 101/259 (38%), Positives = 146/259 (56%), Gaps = 13/259 (5%)
Query: 39 YLGRSKNFRSRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATD 98
Y G NF IIPAR+ASSR KPL++I GKPMIQ WE+++ A +++ATD
Sbjct: 6 YKGNVMNF----TVIIPARYASSRLPRKPLLDIAGKPMIQHVWEKAQQAGA-TRVIIATD 60
Query: 99 DEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIID 157
+I + FGA+V MTS+ +GTER E ++K++ +I+VN+QGDEPLI P I+
Sbjct: 61 HPEIEATTKAFGAEVCMTSDQHNSGTERLAEVIEKMQIADNEIIVNVQGDEPLIPPVIVS 120
Query: 158 GVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS--GKV 215
V + L + + AV E+ F+PN VK + D +G A+YFSR IP+ +
Sbjct: 121 QVAENLDRCQVNMATLAVKLTTKEELFNPNAVKALADKNGMALYFSRAPIPFARDHFADC 180
Query: 216 NPQF----PYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDH 271
+ F YL H+GI +Y + F+K Y PT L+ E LEQL+ L G K+ +
Sbjct: 181 DDAFVASQNYLRHIGIYAYRAGFVKQYVAWQPTQLEQLESLEQLRALWYGEKIHIELAKQ 240
Query: 272 EAH-GVDAPEDVEKIESFM 289
GVD ED+E++ +
Sbjct: 241 APQVGVDTQEDLERVRRIL 259
>gi|83859819|ref|ZP_00953339.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Oceanicaulis sp.
HTCC2633]
gi|83852178|gb|EAP90032.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Oceanicaulis sp.
HTCC2633]
Length = 258
Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 94/247 (38%), Positives = 139/247 (56%), Gaps = 17/247 (6%)
Query: 50 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQF 109
V+ +IPAR+ S+RF GKPL I G PM++R + A ++D ++VATDD +I + F
Sbjct: 3 VIAVIPARYGSTRFPGKPLHEIAGVPMVERVRRLAAAAPSIDRVIVATDDARILAAVEGF 62
Query: 110 GADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
G + +MT ESCRNGTER EA++ K D++VN+QGD PL P ++D A++A P
Sbjct: 63 GGEAVMTPESCRNGTERAFEAVKDFAKPDDVIVNLQGDAPLTPPWVVDAAAAAMKADPAL 122
Query: 170 VFSTAVTSLKPEDAFDP----------NRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF 219
+T +L EDA D V D A+YFS+ +IP+ + N
Sbjct: 123 KLATPAVALS-EDALDKLSEAKRRGEVGGTTVVFDKAMNALYFSKAIIPFKRE---NTGL 178
Query: 220 PYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEA---HGV 276
P H+G+ +Y + L L P+PL+L E LEQL+ LENG ++V+ ++ + V
Sbjct: 179 PIYKHIGLYAYRFDTLSELVKLDPSPLELTESLEQLRALENGIPIRVVLTEYRGRTPYSV 238
Query: 277 DAPEDVE 283
D+P D E
Sbjct: 239 DSPRDAE 245
>gi|422014942|ref|ZP_16361550.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Providencia
burhodogranariea DSM 19968]
gi|414100465|gb|EKT62083.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Providencia
burhodogranariea DSM 19968]
Length = 247
Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 99/239 (41%), Positives = 141/239 (58%), Gaps = 7/239 (2%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR+AS+R GKPL +I GKPM+ R E++ L + ++VATD+ +A + G +
Sbjct: 5 IIPARYASTRLPGKPLADIHGKPMVVRVMEQA-LKSGASRVIVATDNRNVAAAVIEAGGE 63
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
MT + ++GTER E + D I+VN+QGDEPLI PEII V + LQ + +
Sbjct: 64 ACMTDPNHQSGTERLAEVIDTYGFSDDEIIVNVQGDEPLIPPEIISQVARNLQNSKAQMG 123
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP----YLLHLGI 227
+ AV ++AF+PN VK V DN GYA+YFSR IP+++ Q +L H+GI
Sbjct: 124 TLAVPIHDAQEAFNPNAVKVVTDNEGYALYFSRATIPWDRDKFALSQETIGDHFLRHIGI 183
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHE-AHGVDAPEDVEKI 285
+Y S F++ Y +PL+ E LEQL+VL G K+ V + GVD PED+E +
Sbjct: 184 YAYRSGFIRRYITWEASPLEKIEMLEQLRVLWYGEKIHVAVAEKTPGAGVDTPEDLEAV 242
>gi|432591966|ref|ZP_19828293.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE60]
gi|431131882|gb|ELE33898.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE60]
Length = 248
Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 102/248 (41%), Positives = 145/248 (58%), Gaps = 11/248 (4%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPAR+AS+R GKPLV+I GKPMI ER++ + + ++VATD E +A + G
Sbjct: 4 VVIIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGAERIIVATDHEDVARAVEVAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D ++VN+QGDEP+I II V L
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSG------KVNPQFPYLL 223
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ V F L
Sbjct: 123 MATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAKDLETVGDNF--LR 180
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDV 282
HLGI Y + F++ Y P+PL+ E LEQL+VL G K+ V + + GVD PED+
Sbjct: 181 HLGIYGYRAGFIRRYVTWQPSPLEHIEMLEQLRVLWYGKKIHVAVAQEVPGTGVDTPEDL 240
Query: 283 EKIESFMR 290
+++ + MR
Sbjct: 241 KRVRAEMR 248
>gi|296103080|ref|YP_003613226.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Enterobacter
cloacae subsp. cloacae ATCC 13047]
gi|295057539|gb|ADF62277.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Enterobacter
cloacae subsp. cloacae ATCC 13047]
Length = 248
Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 100/246 (40%), Positives = 144/246 (58%), Gaps = 7/246 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPAR+AS+R GKPLV+I GKPMI ER++ + D ++VATD +A + G
Sbjct: 4 VVIIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGADRIIVATDHPDVARAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D ++VN+QGDEP+I II V + L
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEPMIPAAIIRQVAENLAQRQVG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS----GKVNPQFPYLLHL 225
+ + AV E+AF+PN VK V D GYA+YFSR IP+++ K +L H+
Sbjct: 123 MATLAVPIHHAEEAFNPNAVKVVTDAEGYALYFSRATIPWDRDRFAVSKETIGDTFLRHI 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI Y + F++ Y P+PL+ E LEQL+VL G K+ V + + GVD PED+E+
Sbjct: 183 GIYGYRAGFIRRYVTWTPSPLEHIEMLEQLRVLWYGEKIHVAVAEEVPGTGVDTPEDLER 242
Query: 285 IESFMR 290
+ + +R
Sbjct: 243 VRAELR 248
>gi|312795271|ref|YP_004028193.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Burkholderia
rhizoxinica HKI 454]
gi|312167046|emb|CBW74049.1| 3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38)
[Burkholderia rhizoxinica HKI 454]
Length = 290
Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 93/264 (35%), Positives = 146/264 (55%), Gaps = 25/264 (9%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
++PAR AS+R GKPL ++ GKPM+ E+++ A+ +++ATD E + CQ G +
Sbjct: 29 VVPARLASTRLPGKPLADLAGKPMVVHVAEQAR-ASGASRVLIATDAEVVLNACQAHGIE 87
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
++T GT+R E +Q D +VVN+QGDEPLIEP +I GV L A PD
Sbjct: 88 ALLTRTDHPTGTDRLAEVVQACRLPDDALVVNVQGDEPLIEPRLIAGVAAHLAANPDCAI 147
Query: 172 STAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF-------PYL- 222
+TA + +P F+PN VK V+D G A+YFSR IP+++ PQ+ P +
Sbjct: 148 ATAAHPITEPAQVFNPNIVKVVLDARGIALYFSRAPIPWSRDAY-QPQWSPEGGAAPVVD 206
Query: 223 ------------LHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVD 270
H+G+ +Y + FL+ YP L P+++ E LEQL+ + +G ++ V+
Sbjct: 207 IARLPASSTTVHRHIGLYAYRAGFLRRYPNLSQAPIEIAEALEQLRAMWHGERIAVLLTP 266
Query: 271 HE-AHGVDAPEDVEKIESFMRERN 293
H GVD P D+ ++ + + +R
Sbjct: 267 HAPPPGVDTPADLARVRAILAQRG 290
>gi|290473868|ref|YP_003466742.1| CTP:CMP-3-deoxy-D-manno-octulosonate transferase [Xenorhabdus
bovienii SS-2004]
gi|289173175|emb|CBJ79948.1| CTP:CMP-3-deoxy-D-manno-octulosonate transferase [Xenorhabdus
bovienii SS-2004]
Length = 249
Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 99/245 (40%), Positives = 142/245 (57%), Gaps = 7/245 (2%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPARFAS+R GKPL +I GKPMI R ER+ + + + ++VATD++ + + G +
Sbjct: 5 IIPARFASTRLPGKPLADIHGKPMIVRVMERA-IRSGANRVIVATDNQAVFDAVTAAGGE 63
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
MTS +GTER E + + + D I+VN+QGDEPLI +II V L + +
Sbjct: 64 ACMTSAHHHSGTERLAEVIDQYQFSDDEIIVNVQGDEPLIPEQIIKQVADNLAESDAGMA 123
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK----SGKVNPQFPYLLHLGI 227
+ AV E+AF+PN VK V+D GYA+YFSR IP+ + K +L H+G+
Sbjct: 124 TLAVQIQDAEEAFNPNTVKVVMDAQGYALYFSRATIPWERDRFMQSKETVGDNFLRHIGL 183
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIK-VDHEAHGVDAPEDVEKIE 286
+Y + F++ Y P+PL+ E LEQL+VL G K+ V K + GVD PED+E +
Sbjct: 184 YAYRAGFIRRYVQWAPSPLESIEMLEQLRVLWYGEKIHVAKALQAPGAGVDTPEDLEAVR 243
Query: 287 SFMRE 291
E
Sbjct: 244 KTFAE 248
>gi|450221956|ref|ZP_21896671.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O08]
gi|449315596|gb|EMD05737.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O08]
Length = 246
Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 89/242 (36%), Positives = 144/242 (59%), Gaps = 5/242 (2%)
Query: 48 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQ 107
S+ V +IPAR+ SSR GKPL++I+GKPMIQ +ER+ + + VATDD+++ + Q
Sbjct: 2 SKAVIVIPARYGSSRLPGKPLLDIVGKPMIQHVYERALQVAGVAEVWVATDDQRVEKAVQ 61
Query: 108 QFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
FG IMT +GT+R E + K+E DI +N+QGDEP+I P ++ +++ ++ P
Sbjct: 62 AFGGKAIMTRNDHESGTDRLVEVMHKVEA--DIYINLQGDEPMIRPRDVETLLQGMRDDP 119
Query: 168 DAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+T ++ E+A +P+ VK VV+ A+YFSR IPY ++ + + YL H+GI
Sbjct: 120 ALPVATLCHAISAEEAAEPSTVKVVVNTRQDALYFSRSPIPYPRNAE---KARYLKHVGI 176
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
+Y + L+ Y L + + E LEQL+++ G ++ +V GVD P +EK+ +
Sbjct: 177 YAYRRDVLQNYSQLPESMQEQAESLEQLRLMSAGINIRTFEVAATGPGVDTPACLEKVRA 236
Query: 288 FM 289
M
Sbjct: 237 LM 238
>gi|432994644|ref|ZP_20183258.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE218]
gi|433114799|ref|ZP_20300612.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE153]
gi|431508857|gb|ELH87128.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE218]
gi|431636233|gb|ELJ04391.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE153]
Length = 248
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 102/248 (41%), Positives = 145/248 (58%), Gaps = 11/248 (4%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPAR+AS+R GKPLV+I GKPMI ER++ + + ++VATD E +A + G
Sbjct: 4 VVIIPARYASTRLPGKPLVDINGKPMILHVLERAR-ESGAERIIVATDHEDVARAVEVAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D ++VN+QGDEP+I II V L
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSG------KVNPQFPYLL 223
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ V F L
Sbjct: 123 MATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAKDLETVGDNF--LR 180
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDV 282
HLGI Y + F++ Y P+PL+ E LEQL+VL G K+ V + + GVD PED+
Sbjct: 181 HLGIYGYRAGFIRRYVTWQPSPLEHIEMLEQLRVLWYGEKIHVAVAQEVPGTGVDTPEDL 240
Query: 283 EKIESFMR 290
+++ + MR
Sbjct: 241 KRVRAEMR 248
>gi|26246944|ref|NP_752984.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
CFT073]
gi|227884117|ref|ZP_04001922.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
83972]
gi|300978423|ref|ZP_07174271.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 45-1]
gi|301047821|ref|ZP_07194873.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 185-1]
gi|386628457|ref|YP_006148177.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
str. 'clone D i2']
gi|386633377|ref|YP_006153096.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
str. 'clone D i14']
gi|386638265|ref|YP_006105063.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
ABU 83972]
gi|422366093|ref|ZP_16446568.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 153-1]
gi|432410915|ref|ZP_19653596.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE39]
gi|432430963|ref|ZP_19673406.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE187]
gi|432435492|ref|ZP_19677891.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE188]
gi|432455778|ref|ZP_19697977.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE201]
gi|432494716|ref|ZP_19736532.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE214]
gi|432503555|ref|ZP_19745290.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE220]
gi|432523001|ref|ZP_19760138.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE230]
gi|432567929|ref|ZP_19804451.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE53]
gi|432606733|ref|ZP_19842926.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE67]
gi|432650375|ref|ZP_19886135.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE87]
gi|432782799|ref|ZP_20016983.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE63]
gi|432801239|ref|ZP_20035223.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE84]
gi|432843289|ref|ZP_20076554.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE141]
gi|432977572|ref|ZP_20166395.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE209]
gi|432999062|ref|ZP_20187600.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE223]
gi|433057207|ref|ZP_20244289.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE124]
gi|433086524|ref|ZP_20272918.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE137]
gi|433124462|ref|ZP_20310047.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE160]
gi|433138522|ref|ZP_20323804.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE167]
gi|433148305|ref|ZP_20333368.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE174]
gi|433207032|ref|ZP_20390727.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE97]
gi|433211784|ref|ZP_20395395.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE99]
gi|442606468|ref|ZP_21021268.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
Nissle 1917]
gi|29336709|sp|Q8FJA9.3|KDSB_ECOL6 RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|26107344|gb|AAN79527.1|AE016758_131 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
CFT073]
gi|227838869|gb|EEJ49335.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
83972]
gi|300300313|gb|EFJ56698.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 185-1]
gi|300409665|gb|EFJ93203.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 45-1]
gi|307552757|gb|ADN45532.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
ABU 83972]
gi|315291216|gb|EFU50576.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 153-1]
gi|355419356|gb|AER83553.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
str. 'clone D i2']
gi|355424276|gb|AER88472.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
str. 'clone D i14']
gi|430937413|gb|ELC57668.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE39]
gi|430955403|gb|ELC74186.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE187]
gi|430965820|gb|ELC83229.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE188]
gi|430984505|gb|ELD01128.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE201]
gi|431027321|gb|ELD40384.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE214]
gi|431041601|gb|ELD52101.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE220]
gi|431054311|gb|ELD63892.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE230]
gi|431102070|gb|ELE06975.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE53]
gi|431140185|gb|ELE41962.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE67]
gi|431192931|gb|ELE92275.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE87]
gi|431331198|gb|ELG18461.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE63]
gi|431350185|gb|ELG37003.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE84]
gi|431396755|gb|ELG80222.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE141]
gi|431481083|gb|ELH60797.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE209]
gi|431513402|gb|ELH91485.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE223]
gi|431573327|gb|ELI46132.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE124]
gi|431608901|gb|ELI78238.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE137]
gi|431648917|gb|ELJ16284.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE160]
gi|431664004|gb|ELJ30746.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE167]
gi|431676031|gb|ELJ42155.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE174]
gi|431732248|gb|ELJ95704.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE97]
gi|431735729|gb|ELJ99075.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE99]
gi|441712544|emb|CCQ07245.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
Nissle 1917]
Length = 248
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 102/248 (41%), Positives = 145/248 (58%), Gaps = 11/248 (4%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPAR+AS+R GKPLV+I GKPMI ER++ + + ++VATD E +A + G
Sbjct: 4 VVIIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGAERIIVATDHEDVARAVEVAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D ++VN+QGDEP+I II V L
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSG------KVNPQFPYLL 223
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ V F L
Sbjct: 123 MATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAKDLETVGDNF--LR 180
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDV 282
HLGI Y + F++ Y P+PL+ E LEQL+VL G K+ V + + GVD PED+
Sbjct: 181 HLGIYGYRAGFIRRYVTWQPSPLEHIEMLEQLRVLWYGEKIHVAVAQEVPGTGVDTPEDL 240
Query: 283 EKIESFMR 290
+++ + MR
Sbjct: 241 KRVRAEMR 248
>gi|115315100|ref|YP_763823.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Francisella
tularensis subsp. holarctica OSU18]
gi|134301679|ref|YP_001121647.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Francisella
tularensis subsp. tularensis WY96-3418]
gi|156502852|ref|YP_001428917.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Francisella
tularensis subsp. holarctica FTNF002-00]
gi|290954362|ref|ZP_06558983.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Francisella
tularensis subsp. holarctica URFT1]
gi|421751449|ref|ZP_16188495.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Francisella
tularensis subsp. tularensis AS_713]
gi|421753300|ref|ZP_16190298.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Francisella
tularensis subsp. tularensis 831]
gi|421757030|ref|ZP_16193918.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Francisella
tularensis subsp. tularensis 80700103]
gi|421758891|ref|ZP_16195730.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Francisella
tularensis subsp. tularensis 70102010]
gi|423051063|ref|YP_007009497.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Francisella
tularensis subsp. holarctica F92]
gi|424674210|ref|ZP_18111133.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Francisella
tularensis subsp. tularensis 70001275]
gi|122324897|sp|Q0BL48.1|KDSB_FRATO RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|226724292|sp|A4IX75.1|KDSB_FRATW RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|226724313|sp|A7NDA8.1|KDSB_FRATF RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|115129999|gb|ABI83186.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Francisella
tularensis subsp. holarctica OSU18]
gi|134049456|gb|ABO46527.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Francisella
tularensis subsp. tularensis WY96-3418]
gi|156253455|gb|ABU61961.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Francisella
tularensis subsp. holarctica FTNF002-00]
gi|409087563|gb|EKM87655.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Francisella
tularensis subsp. tularensis 831]
gi|409087598|gb|EKM87688.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Francisella
tularensis subsp. tularensis AS_713]
gi|409091587|gb|EKM91580.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Francisella
tularensis subsp. tularensis 70102010]
gi|409092943|gb|EKM92904.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Francisella
tularensis subsp. tularensis 80700103]
gi|417435147|gb|EKT90067.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Francisella
tularensis subsp. tularensis 70001275]
gi|421951785|gb|AFX71034.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Francisella
tularensis subsp. holarctica F92]
Length = 250
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 100/246 (40%), Positives = 142/246 (57%), Gaps = 13/246 (5%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR S+R K L +I GKPMIQR +E+ + D +++ATD +KI + + FGA
Sbjct: 7 VIPARLKSTRLPNKMLADIAGKPMIQRVYEQVT-KSKFDSIIIATDSQKIKDIAESFGAK 65
Query: 113 VIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V++T + ++GT+R EA+ KL DIVVN+QGDEPLI E I+ + L +AV
Sbjct: 66 VVLTRDDHQSGTDRIAEAVTKLGFADEDIVVNVQGDEPLIPIENIEQAAQLLIDKSEAVV 125
Query: 172 STAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF---PYLLHLGI 227
ST + ED ++PN VK V D + YA+YFSR IP+ + Q + H+GI
Sbjct: 126 STLCEKITDVEDIYNPNNVKVVFDKNNYALYFSRASIPFERGFSEKEQINISEFFRHIGI 185
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAH----GVDAPEDVE 283
+Y FLK Y L +P++ E LEQL+VL NGYK I ++ A GVD +D+E
Sbjct: 186 YAYRVAFLKHYAELTVSPIEKYEALEQLRVLYNGYK---IAIEQSAKSTPAGVDTLQDLE 242
Query: 284 KIESFM 289
K+
Sbjct: 243 KVRKLF 248
>gi|254509958|ref|ZP_05122025.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Rhodobacteraceae
bacterium KLH11]
gi|221533669|gb|EEE36657.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Rhodobacteraceae
bacterium KLH11]
Length = 266
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 101/261 (38%), Positives = 142/261 (54%), Gaps = 22/261 (8%)
Query: 54 IPARFASSRFEGKPLVNILGK-----PMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
IPAR+ASSR+ GKPLV + G +I+R+W + + +D +VVATDD++I E +
Sbjct: 7 IPARYASSRYPGKPLVPLTGANGTSMTLIERSWRAAISVSGVDRVVVATDDDRIREAAEG 66
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FGA+V+MTS+SCRNGTERC E L Y+IVVN+QGD PL I+ ++ L+ APD
Sbjct: 67 FGAEVVMTSDSCRNGTERCAETHAALGGGYEIVVNLQGDAPLTPHWFIEDLISGLRDAPD 126
Query: 169 AVFSTAVTS---------LKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ- 218
A +T V L V N A+YFS+ +IP+ +
Sbjct: 127 AGIATPVLRCDGAALNGLLNDRKHGRVGGTTAVFGNDHSALYFSKEVIPFTSENYADADP 186
Query: 219 FPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHG--- 275
P H+G+ +Y + L YP PL+ E LEQL+ +ENG K+ ++V EA G
Sbjct: 187 TPVFHHVGVYAYRPDALAAYPNWPTGPLETLEGLEQLRFMENGRKVLCVEV--EAKGRQF 244
Query: 276 --VDAPEDVEKIESFMRERNL 294
++ P+DV KIE M L
Sbjct: 245 WELNNPQDVAKIEEMMAAMGL 265
>gi|402702421|ref|ZP_10850400.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas
fragi A22]
Length = 428
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 95/241 (39%), Positives = 140/241 (58%), Gaps = 5/241 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
RV +IPAR+ S+R GKPL +I GKPM+Q +ER+ D +VVATDDE++A+ +
Sbjct: 7 RVAIVIPARYGSTRLPGKPLADICGKPMVQHVYERALQVAHADVVVVATDDERVAQAVEA 66
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG IMTS +GT+R E + K++ DI +N+QGDEPL+ P ID + + A
Sbjct: 67 FGGQYIMTSADHPSGTDRLAEVMAKVDA--DIYINLQGDEPLVRPADIDALATGMLADAQ 124
Query: 169 AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQ 228
T + +A +PN VK V+ ++G A+YFSR IPY + G+ + YL H+G+
Sbjct: 125 VKVGTLCHVIDAHEAANPNTVKVVLAHNGNALYFSRSPIPYPRDGE---EASYLKHVGVY 181
Query: 229 SYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESF 288
Y + L Y GL L+ E LEQL++L G ++ V+ GVD PE +E++ +
Sbjct: 182 GYRRDVLADYTGLPQAMLENAEKLEQLRLLAAGVCIRAYVVEPTGPGVDTPECLEQVRAL 241
Query: 289 M 289
M
Sbjct: 242 M 242
>gi|388548077|ref|ZP_10151332.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas sp.
M47T1]
gi|388273793|gb|EIK93400.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas sp.
M47T1]
Length = 254
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 100/248 (40%), Positives = 146/248 (58%), Gaps = 14/248 (5%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPARF+S+R GKPL I GKPM+Q WE++ ++ + +VVATDD++I + CQ FGA
Sbjct: 8 VIPARFSSTRLPGKPLQMIAGKPMVQHVWEQA-CKSSAERVVVATDDQRIVDACQAFGAQ 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V++T +GT+R E Q L D IVVN+QGDEPLI P +ID V L A +A
Sbjct: 67 VLLTRADHESGTDRLAEVAQALGLPADAIVVNVQGDEPLIPPAVIDQVAANLAAHAEAGM 126
Query: 172 STAVTSLKPEDA---FDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ------FPYL 222
+T + ED F+PN VK V D +G A+ FSR +P+ + + P+
Sbjct: 127 ATLAEPI--EDVASLFNPNVVKVVSDFNGLALTFSRATLPWARDQFAQDRDALPAGVPFR 184
Query: 223 LHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDAPED 281
H+GI +Y + FL+ + G P L+ E LEQL+ L +G ++ V V+ GVD PED
Sbjct: 185 RHIGIYAYRAGFLQAFVGWGPCWLEETERLEQLRALWHGVRIHVADAVEAPPAGVDTPED 244
Query: 282 VEKIESFM 289
+E+++ +
Sbjct: 245 LERVKRLL 252
>gi|118595152|ref|ZP_01552499.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Methylophilales
bacterium HTCC2181]
gi|118440930|gb|EAV47557.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Methylophilales
bacterium HTCC2181]
Length = 247
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 98/242 (40%), Positives = 149/242 (61%), Gaps = 8/242 (3%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IP+R+ S+R GKPL+ I G PM+ +++L+ D ++VATDDE+I C +QFG
Sbjct: 6 VIPSRYNSTRLAGKPLIEIAGLPMVIHVARKARLSGA-DEVIVATDDERIFNCVEQFGFK 64
Query: 113 VIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
I+T +GT+R NE L + I++N+QGDEPLI+P +I+ V + + + +
Sbjct: 65 AIITDPEHSSGTDRINEVLNHTDWNDETIIINLQGDEPLIDPLLINKVAHGM-SELEVDY 123
Query: 172 STAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK-SGKVNPQFPYLLHLGIQS 229
+TA +S + ED + N VK V+ YA+YFSR +IPY++ SG+ + L H+GI
Sbjct: 124 ATAASSFERTEDFANVNNVKVVLGRDDYALYFSRSMIPYDRVSGEDSIAQGALQHIGIYG 183
Query: 230 YDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAH--GVDAPEDVEKIES 287
Y + FL+ + GL + L+ E LEQL+ LEN K+KV K D AH GVD ED++KI+
Sbjct: 184 YTAKFLRFFCGLPKSNLERIEGLEQLRALENHQKIKVFKYDG-AHSIGVDTQEDLDKIKK 242
Query: 288 FM 289
+
Sbjct: 243 IL 244
>gi|401763034|ref|YP_006578041.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Enterobacter
cloacae subsp. cloacae ENHKU01]
gi|400174568|gb|AFP69417.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Enterobacter
cloacae subsp. cloacae ENHKU01]
Length = 248
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 101/246 (41%), Positives = 145/246 (58%), Gaps = 7/246 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPAR+AS+R GKPLV+I GKPMI ER++ + D ++VATD +A + G
Sbjct: 4 VVIIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGADRVIVATDHPDVARAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D ++VN+QGDEP+I II V + L
Sbjct: 63 GEVCMTRVDHQSGTERLAEVVEKCGFSDDTVIVNVQGDEPMIPAVIIRQVAENLAQRQVG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS----GKVNPQFPYLLHL 225
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ K +L HL
Sbjct: 123 MATLAVPVHHAEEAFNPNAVKVVMDAEGYALYFSRATIPWDRDRFALSKETIGDSFLRHL 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI Y + F++ Y P+PL+ E LEQL+VL G K+ V + + GVD PED+E+
Sbjct: 183 GIYGYRAGFIRRYVTWAPSPLEHIEMLEQLRVLWYGEKIHVAVAKEVPGTGVDTPEDLER 242
Query: 285 IESFMR 290
+ + +R
Sbjct: 243 VRAELR 248
>gi|126207573|ref|YP_001052798.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
gi|226723579|sp|A3MYF7.1|KDSB1_ACTP2 RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase 1;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase 1; Short=CKS 1; Short=CMP-KDO synthase 1
gi|126096365|gb|ABN73193.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
Length = 250
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 98/245 (40%), Positives = 142/245 (57%), Gaps = 9/245 (3%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR+ASSR KPL++I GKPMIQ WE+++ A +++ATD +I + FGA+
Sbjct: 6 IIPARYASSRLPRKPLLDIAGKPMIQHVWEKAQQAGA-TRVIIATDHPEIEATAKAFGAE 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS+ +GTER E ++K++ D I+VN+QGDEPLI P I+ V + L +
Sbjct: 65 VCMTSDQHNSGTERLAEVIEKMQIADDEIIVNVQGDEPLIPPVIVSQVAENLDRCQVNMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS--GKVNPQF----PYLLHL 225
+ AV E+ F+PN VK + D +G A+YFSR IP+ + + F YL H+
Sbjct: 125 TLAVKLTTKEELFNPNAVKALADKNGMALYFSRAPIPFARDHFADCDDAFVASQNYLRHI 184
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAH-GVDAPEDVEK 284
GI +Y + F+K Y PT L+ E LEQL+ L G K+ + GVD ED+E+
Sbjct: 185 GIYAYRAGFVKQYVAWQPTQLEQLESLEQLRALWYGEKIHIELAKQAPQVGVDTQEDLER 244
Query: 285 IESFM 289
+ +
Sbjct: 245 VRRIL 249
>gi|395225661|ref|ZP_10404178.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Thiovulum sp.
ES]
gi|394446139|gb|EJF06983.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Thiovulum sp.
ES]
Length = 254
Score = 171 bits (432), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 93/249 (37%), Positives = 148/249 (59%), Gaps = 8/249 (3%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
+ IIPAR SSRF GKP+ ILG PMI + RSK++ +L + +AT D+ I + G
Sbjct: 4 IAIIPARMGSSRFPGKPMAEILGMPMIGHCYFRSKMSQSLSEVYIATPDKVIFDYATSIG 63
Query: 111 ADVIMTSESCRNGTERCNEALQKLEK----KYDIVVNIQGDEPLIEPEIIDGVVKALQAA 166
A +MTS+ ++RC EA+ K+E+ + DI+V +QGDEPL PE+ID ++ +
Sbjct: 64 AKAVMTSDKHERASDRCAEAMLKIEEETGNRVDIMVLVQGDEPLTFPEMIDQAIEPV-VK 122
Query: 167 PDAVFSTAVTSLKPEDAF-DPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHL 225
+A + V +L+ + F DPN VK V+D + A+YFSR IP K G ++ P +
Sbjct: 123 NEAKITNLVANLETVEEFEDPNEVKVVMDKNNNALYFSREPIPSRKKGVLD--VPMKKQV 180
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKI 285
+ Y+ +FL Y + PTPL++ E ++ +++LENG K+K++ + VD PED+ ++
Sbjct: 181 CVIPYERDFLIEYNEMTPTPLEIVESVDMMRILENGQKVKMVDTEFITKAVDTPEDLVRV 240
Query: 286 ESFMRERNL 294
M++ L
Sbjct: 241 VKMMKDDKL 249
>gi|386388705|ref|ZP_10073560.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Haemophilus
paraphrohaemolyticus HK411]
gi|385697349|gb|EIG27779.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Haemophilus
paraphrohaemolyticus HK411]
Length = 252
Score = 171 bits (432), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 101/246 (41%), Positives = 147/246 (59%), Gaps = 11/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR+ASSR KPL +I+GKPMIQ W++++ A + +++ATD E+I + + FGA+
Sbjct: 6 IIPARYASSRLPRKPLADIVGKPMIQHVWKKAQQAGA-NRVIIATDHEEIEKVAKAFGAE 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS +GTER +E ++K+ D ++VN+QGDEPLI II V + L +
Sbjct: 65 VCMTSTEHNSGTERLSEVIEKMAIADDEVIVNVQGDEPLIPSVIIQQVAQNLAENQVNMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS--GKVNPQF----PYLLHL 225
+ AV E+ F+PN VK V D G A+YFSR IP+ + + F PYL H+
Sbjct: 125 TLAVKLETKEELFNPNCVKVVTDQKGMALYFSRATIPFARDHFADCDDAFVASQPYLRHI 184
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAH--GVDAPEDVE 283
GI +Y + F+ Y PT L+ E LEQL+ L G K+ V ++ EA GVD ED+E
Sbjct: 185 GIYAYRAKFVNQYIRWQPTVLEKLESLEQLRALWYGEKIHV-ELAKEAPQVGVDTLEDLE 243
Query: 284 KIESFM 289
++ + +
Sbjct: 244 RVRAIL 249
>gi|222157660|ref|YP_002557799.1| 3-deoxy-manno-octulosonatecytidylyltransferase(EC 27738)
[Escherichia coli LF82]
gi|300935342|ref|ZP_07150345.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 21-1]
gi|306816715|ref|ZP_07450847.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
NC101]
gi|387618242|ref|YP_006121264.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O83:H1 str. NRG 857C]
gi|387830827|ref|YP_003350764.1| 3-deoxy-manno-octulosonate cytidylyltransferase KpsU [Escherichia
coli SE15]
gi|419701780|ref|ZP_14229379.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
SCI-07]
gi|422383318|ref|ZP_16463470.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 57-2]
gi|432354986|ref|ZP_19598255.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE2]
gi|432382674|ref|ZP_19625613.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE15]
gi|432388707|ref|ZP_19631587.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE16]
gi|432398898|ref|ZP_19641673.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE25]
gi|432427620|ref|ZP_19670106.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE181]
gi|432515343|ref|ZP_19752559.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE224]
gi|432539335|ref|ZP_19776231.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE235]
gi|432612955|ref|ZP_19849113.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE72]
gi|432642547|ref|ZP_19878375.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE83]
gi|432647623|ref|ZP_19883409.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE86]
gi|432657186|ref|ZP_19892883.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE93]
gi|432667542|ref|ZP_19903117.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE116]
gi|432700469|ref|ZP_19935614.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE169]
gi|432724418|ref|ZP_19959332.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE17]
gi|432728998|ref|ZP_19963873.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE18]
gi|432733709|ref|ZP_19968534.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE45]
gi|432742688|ref|ZP_19977403.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE23]
gi|432746931|ref|ZP_19981593.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE43]
gi|432760795|ref|ZP_19995285.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE46]
gi|432906595|ref|ZP_20115134.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE194]
gi|432939572|ref|ZP_20137675.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE183]
gi|432973225|ref|ZP_20162071.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE207]
gi|432986798|ref|ZP_20175511.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE215]
gi|432992051|ref|ZP_20180710.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE217]
gi|433039943|ref|ZP_20227538.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE113]
gi|433053546|ref|ZP_20240730.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE122]
gi|433083867|ref|ZP_20270318.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE133]
gi|433102527|ref|ZP_20288602.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE145]
gi|433112182|ref|ZP_20298038.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE150]
gi|433145539|ref|ZP_20330675.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE168]
gi|433178704|ref|ZP_20363107.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE82]
gi|433189728|ref|ZP_20373819.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE88]
gi|222034665|emb|CAP77407.1| 3-deoxy-manno-octulosonatecytidylyltransferase(EC 27738)
[Escherichia coli LF82]
gi|281179984|dbj|BAI56314.1| 3-deoxy-manno-octulosonate cytidylyltransferase KpsU [Escherichia
coli SE15]
gi|300459434|gb|EFK22927.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 21-1]
gi|305850280|gb|EFM50739.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
NC101]
gi|312947503|gb|ADR28330.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O83:H1 str. NRG 857C]
gi|324005459|gb|EGB74678.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 57-2]
gi|380347242|gb|EIA35531.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
SCI-07]
gi|430873894|gb|ELB97460.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE2]
gi|430904177|gb|ELC25886.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE16]
gi|430905734|gb|ELC27342.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE15]
gi|430913503|gb|ELC34624.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE25]
gi|430953166|gb|ELC72076.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE181]
gi|431038950|gb|ELD49836.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE224]
gi|431067748|gb|ELD76264.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE235]
gi|431147138|gb|ELE48561.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE72]
gi|431178970|gb|ELE78877.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE86]
gi|431180079|gb|ELE79970.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE83]
gi|431188643|gb|ELE88084.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE93]
gi|431198934|gb|ELE97715.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE116]
gi|431240949|gb|ELF35396.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE169]
gi|431263352|gb|ELF55338.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE17]
gi|431271594|gb|ELF62713.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE18]
gi|431272617|gb|ELF63716.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE45]
gi|431281846|gb|ELF72744.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE23]
gi|431290043|gb|ELF80768.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE43]
gi|431306102|gb|ELF94415.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE46]
gi|431429043|gb|ELH10973.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE194]
gi|431461242|gb|ELH41510.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE183]
gi|431479651|gb|ELH59384.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE207]
gi|431492320|gb|ELH71921.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE217]
gi|431496054|gb|ELH75638.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE215]
gi|431549754|gb|ELI23829.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE113]
gi|431571132|gb|ELI44038.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE122]
gi|431599359|gb|ELI69065.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE133]
gi|431617328|gb|ELI86344.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE145]
gi|431626052|gb|ELI94604.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE150]
gi|431659370|gb|ELJ26264.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE168]
gi|431702488|gb|ELJ67287.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE82]
gi|431703616|gb|ELJ68302.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE88]
Length = 246
Score = 171 bits (432), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 89/242 (36%), Positives = 144/242 (59%), Gaps = 5/242 (2%)
Query: 48 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQ 107
S+ V +IPAR+ SSR GKPL++I+GKPMIQ +ER+ + + VATDD+++ + Q
Sbjct: 2 SKAVIVIPARYGSSRLPGKPLLDIVGKPMIQHVYERALQVAGVAEVWVATDDQRVEKAVQ 61
Query: 108 QFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
FG IMT +GT+R E + K+E DI +N+QGDEP+I P ++ +++ ++ P
Sbjct: 62 AFGGKAIMTRNDHESGTDRLVEVMHKVEA--DIYINLQGDEPMIRPRDVETLLQGMRDDP 119
Query: 168 DAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+T ++ E+A +P+ VK VV+ A+YFSR IPY ++ + + YL H+GI
Sbjct: 120 ALPVATLCHAISAEEATEPSTVKVVVNTRQDALYFSRSPIPYPRNAE---KARYLKHVGI 176
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
+Y + L+ Y L + + E LEQL+++ G ++ +V GVD P +EK+ +
Sbjct: 177 YAYRRDVLQNYSQLPESMPEQAESLEQLRLMSAGINIRTFEVAATGPGVDTPACLEKVRA 236
Query: 288 FM 289
M
Sbjct: 237 LM 238
>gi|218548434|ref|YP_002382225.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia
fergusonii ATCC 35469]
gi|424815836|ref|ZP_18240987.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia
fergusonii ECD227]
gi|226724286|sp|B7LN80.1|KDSB_ESCF3 RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|218355975|emb|CAQ88591.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia
fergusonii ATCC 35469]
gi|325496856|gb|EGC94715.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia
fergusonii ECD227]
Length = 248
Score = 171 bits (432), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 100/246 (40%), Positives = 144/246 (58%), Gaps = 7/246 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPARFAS+R GKPL++I GKPMI ER++ + + ++VATD E +A + G
Sbjct: 4 VVIIPARFASTRLPGKPLLDINGKPMIVHVLERAR-ESGAERIIVATDHEDVARAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D ++VN+QGDEP+I II V + L
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCGFSDDTVIVNVQGDEPMIPAVIIRQVAENLAQRQVG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS----GKVNPQFPYLLHL 225
+ + A E+AF+PN VK V+D+ GYA+YFSR IP+++ G +L HL
Sbjct: 123 MATLAAPVHSAEEAFNPNVVKVVLDSEGYALYFSRATIPWDRDRFAKGLETVGDNFLRHL 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDH-EAHGVDAPEDVEK 284
GI Y + F++ Y P+PL+ E LEQL+VL G K+ V + GVD ED+E+
Sbjct: 183 GIYGYRAGFIRRYVNWQPSPLEHIEMLEQLRVLWYGEKIHVAVAEQVPGTGVDTAEDLER 242
Query: 285 IESFMR 290
+ + MR
Sbjct: 243 VRAEMR 248
>gi|118497279|ref|YP_898329.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Francisella
novicida U112]
gi|194323582|ref|ZP_03057359.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Francisella
novicida FTE]
gi|208779072|ref|ZP_03246418.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Francisella
novicida FTG]
gi|254372652|ref|ZP_04988141.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Francisella
tularensis subsp. novicida GA99-3549]
gi|254374113|ref|ZP_04989595.1| hypothetical protein FTDG_00275 [Francisella novicida GA99-3548]
gi|385792622|ref|YP_005825598.1| hypothetical protein [Francisella cf. novicida Fx1]
gi|226724291|sp|A0Q5R0.1|KDSB_FRATN RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|118423185|gb|ABK89575.1| 3-deoxy-D-manno-octulosonate cytidyltransferase [Francisella
novicida U112]
gi|151570379|gb|EDN36033.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Francisella
novicida GA99-3549]
gi|151571833|gb|EDN37487.1| hypothetical protein FTDG_00275 [Francisella novicida GA99-3548]
gi|194322437|gb|EDX19918.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Francisella
tularensis subsp. novicida FTE]
gi|208744872|gb|EDZ91170.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Francisella
novicida FTG]
gi|328676768|gb|AEB27638.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Francisella cf.
novicida Fx1]
Length = 250
Score = 171 bits (432), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 100/242 (41%), Positives = 142/242 (58%), Gaps = 13/242 (5%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR S+R K L +I GKPMIQR +E+ + D +++ATD +KI + + FGA
Sbjct: 7 VIPARLKSTRLPNKMLADIAGKPMIQRVYEQVA-KSKFDSIIIATDSQKIKDIAESFGAK 65
Query: 113 VIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V++T + ++GT+R EA+ KL DIVVN+QGDEPLI E I+ + L +AV
Sbjct: 66 VVLTRDDHQSGTDRIAEAVTKLGFADEDIVVNVQGDEPLIPIENIEQAAQLLIDKSEAVV 125
Query: 172 STAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF---PYLLHLGI 227
ST + ED ++PN VK V D + YA+YFSR IP+ + Q + H+GI
Sbjct: 126 STLCEKITDVEDIYNPNNVKVVFDKNNYALYFSRASIPFERGFSEKEQINISEFFRHIGI 185
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAH----GVDAPEDVE 283
+Y FLK Y L +P++ E LEQL+VL NGYK I ++ A GVD +D+E
Sbjct: 186 YAYRVAFLKHYAELTVSPIEKYEALEQLRVLYNGYK---IAIEQSAKSTPAGVDTLQDLE 242
Query: 284 KI 285
K+
Sbjct: 243 KV 244
>gi|366159958|ref|ZP_09459820.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia sp.
TW09308]
gi|422791727|ref|ZP_16844429.1| cytidylyltransferase [Escherichia coli TA007]
gi|323971783|gb|EGB67009.1| cytidylyltransferase [Escherichia coli TA007]
Length = 246
Score = 171 bits (432), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 89/242 (36%), Positives = 143/242 (59%), Gaps = 5/242 (2%)
Query: 48 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQ 107
S+ V +IPAR+ SSR GKPL++I+GKPMIQ +ER+ + + VATDD ++ + Q
Sbjct: 2 SKAVIVIPARYGSSRLPGKPLLDIVGKPMIQHVYERALQVAGVAEVWVATDDPRVEQAVQ 61
Query: 108 QFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
FG IMT +GT+R E + +E DI +N+QGDEP+I P ++ +++ ++ P
Sbjct: 62 AFGGKAIMTRNDHESGTDRLVEVMHTVEA--DIYINLQGDEPMIRPRDVETLLQGMRDDP 119
Query: 168 DAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+T ++ E+A +P+ VK VV+ A+YFSR IPY ++ + + YL H+GI
Sbjct: 120 ALPVATLCHAISAEEATEPSTVKVVVNTRQDALYFSRSPIPYPRNAE---KARYLKHVGI 176
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
+Y + L+ Y L + L+ E LEQL+++ G ++ +V GVD P +EK+ +
Sbjct: 177 YAYRRDVLQNYSQLPESMLEQAESLEQLRLMNAGINIRTFEVAATGPGVDTPACLEKVRT 236
Query: 288 FM 289
M
Sbjct: 237 LM 238
>gi|432870417|ref|ZP_20090874.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE147]
gi|431409387|gb|ELG92562.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE147]
Length = 246
Score = 171 bits (432), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 89/242 (36%), Positives = 144/242 (59%), Gaps = 5/242 (2%)
Query: 48 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQ 107
S+ V +IPAR+ SSR GKPL++I+GKPMIQ +ER+ + + VATDD+++ + Q
Sbjct: 2 SKAVIVIPARYGSSRLPGKPLLDIVGKPMIQHVYERALQVAGVAEVWVATDDQRVEKAVQ 61
Query: 108 QFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
FG IMT +GT+R E + K+E DI +N+QGDEP+I P ++ +++ ++ P
Sbjct: 62 AFGGKAIMTRNDHESGTDRLVEVMHKVEA--DIYINLQGDEPMIRPRDVETLLQGMRDDP 119
Query: 168 DAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+T ++ E+A +P+ VK VV+ A+YFSR IPY ++ + + YL H+GI
Sbjct: 120 ALPVATLCHAISAEEAAEPSTVKVVVNTRQDALYFSRSPIPYPRNAE---KARYLKHVGI 176
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
+Y + L+ Y L + + E LEQL+++ G ++ +V GVD P +EK+ +
Sbjct: 177 YAYRRDVLQNYSQLPESMPEQAESLEQLRLMSAGINIRTFEVAATGPGVDTPACLEKVRA 236
Query: 288 FM 289
M
Sbjct: 237 LM 238
>gi|24112326|ref|NP_706836.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Shigella flexneri
2a str. 301]
gi|30062452|ref|NP_836623.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Shigella flexneri
2a str. 2457T]
gi|110804926|ref|YP_688446.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Shigella flexneri
5 str. 8401]
gi|384542492|ref|YP_005726554.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Shigella flexneri
2002017]
gi|415854009|ref|ZP_11529899.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shigella
flexneri 2a str. 2457T]
gi|417701036|ref|ZP_12350169.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shigella
flexneri K-218]
gi|417722226|ref|ZP_12371059.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shigella
flexneri K-304]
gi|417727411|ref|ZP_12376147.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shigella
flexneri K-671]
gi|417732567|ref|ZP_12381233.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shigella
flexneri 2747-71]
gi|417737834|ref|ZP_12386433.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shigella
flexneri 4343-70]
gi|417742474|ref|ZP_12391020.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shigella
flexneri 2930-71]
gi|418254497|ref|ZP_12879288.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shigella
flexneri 6603-63]
gi|420340651|ref|ZP_14842166.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shigella
flexneri K-404]
gi|420371068|ref|ZP_14871526.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shigella
flexneri 1235-66]
gi|424837383|ref|ZP_18262020.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Shigella flexneri
5a str. M90T]
gi|81723581|sp|Q83LN8.1|KDSB_SHIFL RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|123342123|sp|Q0SWZ7.1|KDSB_SHIF8 RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|24051187|gb|AAN42543.1| CTP:CMP-3-deoxy-D-manno-octulosonate transferase [Shigella flexneri
2a str. 301]
gi|30040698|gb|AAP16429.1| CTP:CMP-3-deoxy-D-manno-octulosonate transferase [Shigella flexneri
2a str. 2457T]
gi|110614474|gb|ABF03141.1| CTP:CMP-3-deoxy-D-manno-octulosonate transferase [Shigella flexneri
5 str. 8401]
gi|281600277|gb|ADA73261.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Shigella flexneri
2002017]
gi|313650841|gb|EFS15242.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shigella
flexneri 2a str. 2457T]
gi|332759005|gb|EGJ89315.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shigella
flexneri 4343-70]
gi|332760081|gb|EGJ90379.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shigella
flexneri 2747-71]
gi|332762689|gb|EGJ92952.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shigella
flexneri K-671]
gi|332767867|gb|EGJ98057.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shigella
flexneri 2930-71]
gi|333007071|gb|EGK26566.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shigella
flexneri K-218]
gi|333020099|gb|EGK39370.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shigella
flexneri K-304]
gi|383466435|gb|EID61456.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Shigella flexneri
5a str. M90T]
gi|391272226|gb|EIQ31081.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shigella
flexneri K-404]
gi|391319621|gb|EIQ76611.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shigella
flexneri 1235-66]
gi|397900131|gb|EJL16497.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Shigella
flexneri 6603-63]
Length = 248
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 100/246 (40%), Positives = 144/246 (58%), Gaps = 7/246 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPAR+AS+R GKPLV+I GKPMI ER++ + + ++VATD + +A + G
Sbjct: 4 VVIIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGAERIIVATDHDDVARAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D ++VN+QGDEP+I II V L
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS----GKVNPQFPYLLHL 225
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ G +L HL
Sbjct: 123 MATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAEGLETVGDNFLRHL 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI Y + F++ Y +PL+ E LEQL+VL G K+ V + + GVD PED+E+
Sbjct: 183 GIYGYRAGFIRRYVNWQASPLEHIEMLEQLRVLWYGEKIHVAVAQEVPGTGVDTPEDLER 242
Query: 285 IESFMR 290
+ + MR
Sbjct: 243 VRAEMR 248
>gi|401675421|ref|ZP_10807414.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Enterobacter sp.
SST3]
gi|400217399|gb|EJO48292.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Enterobacter sp.
SST3]
Length = 248
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 100/246 (40%), Positives = 145/246 (58%), Gaps = 7/246 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPAR+AS+R GKPLV+I GKPMI ER++ + D ++VATD +A + G
Sbjct: 4 VVIIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGADRVIVATDHPDVARAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D ++VN+QGDEP+I II V + L
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCGFSDDTVIVNVQGDEPMIPAVIIRQVAENLAQRQVG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS----GKVNPQFPYLLHL 225
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ K +L H+
Sbjct: 123 MATLAVPIHHAEEAFNPNAVKVVMDAEGYALYFSRATIPWDRDRFALSKETIGDTFLRHI 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI Y + F++ Y P+PL+ E LEQL+VL G K+ V + + GVD PED+E+
Sbjct: 183 GIYGYRAGFIRRYVAWAPSPLEHIEMLEQLRVLWYGEKIHVAVAEEVPGTGVDTPEDLER 242
Query: 285 IESFMR 290
+ + +R
Sbjct: 243 VRAELR 248
>gi|294140698|ref|YP_003556676.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Shewanella
violacea DSS12]
gi|293327167|dbj|BAJ01898.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Shewanella
violacea DSS12]
Length = 245
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 100/243 (41%), Positives = 139/243 (57%), Gaps = 10/243 (4%)
Query: 50 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQF 109
V +IPAR+ SSRF GKPL I GKPMIQ ER+ LA L + VATDD +I + + F
Sbjct: 3 VTLLIPARYGSSRFPGKPLAPINGKPMIQHVVERASLAKGLTSIYVATDDVRIKDAVEAF 62
Query: 110 GADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
G V+MTS +GT+R +A+ +L K D++VN+QGD+PLI+P I+ ++ + P
Sbjct: 63 GGQVVMTSPEAASGTDRIEDAITQLGLKDDDLIVNLQGDQPLIDPISIEQIISLFERHPG 122
Query: 169 ----AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLH 224
A +T D DP VK V DN A+YFSR IP+ G+ ++P H
Sbjct: 123 EFGMATLGFEITEKSELD--DPKHVKMVFDNDFNALYFSRARIPF---GRDTNEYPVYKH 177
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEK 284
LGI +Y F+ + L L+ E LEQL+ LE+GYK+KV ++ VD PED+
Sbjct: 178 LGIYAYTRKFVSTFAKLPLGRLEDLEKLEQLRALEHGYKIKVAISAFDSPEVDTPEDIRI 237
Query: 285 IES 287
E+
Sbjct: 238 CEA 240
>gi|331664560|ref|ZP_08365466.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
TA143]
gi|432608985|ref|ZP_19845167.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE67]
gi|432854102|ref|ZP_20082647.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE144]
gi|331058491|gb|EGI30472.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
TA143]
gi|431136085|gb|ELE37954.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE67]
gi|431398517|gb|ELG81937.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE144]
Length = 246
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 89/242 (36%), Positives = 144/242 (59%), Gaps = 5/242 (2%)
Query: 48 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQ 107
S+ V +IPAR+ SSR GKPL++I+GKPMIQ +ER+ + + VATDD+++ + Q
Sbjct: 2 SKAVIVIPARYGSSRLPGKPLLDIVGKPMIQHVYERALQVAGVAEVWVATDDQRVEKAVQ 61
Query: 108 QFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
FG IMT +GT+R E + K+E DI +N+QGDEP+I P ++ +++ ++ P
Sbjct: 62 AFGGKAIMTRNDHESGTDRLVEVMHKVEA--DIYINLQGDEPMIRPRDVETLLQGMRDDP 119
Query: 168 DAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+T ++ E+A +P+ VK VV+ H A+YFSR IPY ++ + + YL H+GI
Sbjct: 120 ALPVATLCHAISAEEATEPSTVKVVVNTHQDALYFSRSPIPYPRNAE---KARYLKHVGI 176
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
+Y + L+ Y L + + E LEQL+++ ++ +V GVD P +EK+ +
Sbjct: 177 YAYRRDVLQNYSQLPESMPEQAESLEQLRLMSARINIRTFEVAATGPGVDTPACLEKVRA 236
Query: 288 FM 289
M
Sbjct: 237 LM 238
>gi|423207268|ref|ZP_17193824.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Aeromonas veronii
AMC34]
gi|404620335|gb|EKB17232.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Aeromonas veronii
AMC34]
Length = 248
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 101/245 (41%), Positives = 146/245 (59%), Gaps = 7/245 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V +IPAR+AS+R GKPL +I GKPM+Q E++ L + D ++VATDD ++ + G
Sbjct: 4 VVVIPARYASTRLPGKPLADIHGKPMVQHVVEKA-LQSGADRVIVATDDARVQQALLTTG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MTS ++GTER E + D I+VN+QGDEPLI P II V L AA
Sbjct: 63 VEVCMTSPDHQSGTERLAEVCRHYGFAADTIIVNVQGDEPLIPPAIIRQVADNLAAATAP 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS--GKVNPQF--PYLLHL 225
+ + +V E+AF+PN VK V D GYA+YFSR IP+++ K + Q Y H+
Sbjct: 123 MATLSVPIKDAEEAFNPNAVKVVTDKDGYALYFSRASIPWDRDRFAKSHEQIGDHYQRHI 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIK-VDHEAHGVDAPEDVEK 284
GI +Y + F++ Y P+ L+ E LEQL+VL G K+ V + ++ GVD D+EK
Sbjct: 183 GIYAYRAGFIQRYVDWAPSVLEQVEALEQLRVLWYGEKIHVAQALEAPPVGVDTQADLEK 242
Query: 285 IESFM 289
+ +F+
Sbjct: 243 VRAFL 247
>gi|397167785|ref|ZP_10491225.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Enterobacter
radicincitans DSM 16656]
gi|396090603|gb|EJI88173.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Enterobacter
radicincitans DSM 16656]
Length = 248
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 99/251 (39%), Positives = 146/251 (58%), Gaps = 17/251 (6%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPAR+AS+R GKPLV+I GKPM+ ER++ + D ++VATD+E++ Q G
Sbjct: 4 VVIIPARYASTRLPGKPLVDINGKPMVVHVLERAR-ESGADRIIVATDNEEVMRAVQAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D ++VN+QGDEP+I P II V + L
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCGFSDDTVIVNVQGDEPMIPPAIIRQVAENLSIRNVG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP--------- 220
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ +F
Sbjct: 123 MATLAVPIHSAEEAFNPNAVKVVMDAEGYALYFSRATIPWDRD-----RFALSCETIGDT 177
Query: 221 YLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAP 279
+L H+GI Y + F++ Y +PL+ E LEQL+VL G K+ V + GVD P
Sbjct: 178 FLRHIGIYGYRAGFIRRYVSWQTSPLEQIEMLEQLRVLWYGEKIHVAVASVVPGTGVDTP 237
Query: 280 EDVEKIESFMR 290
+D+E++ +R
Sbjct: 238 DDLERVRQALR 248
>gi|89067377|ref|ZP_01154890.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Oceanicola
granulosus HTCC2516]
gi|89046946|gb|EAR53000.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Oceanicola
granulosus HTCC2516]
Length = 266
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 106/265 (40%), Positives = 147/265 (55%), Gaps = 26/265 (9%)
Query: 53 IIPARFASSRFEGKPLVNILG-----KPMIQRTWERSKLATTLD-HLVVATDDEKIAECC 106
+IPAR+ S R+ GKPLV + G + +I+R+W R+ L D +VVATDD +IA+
Sbjct: 6 VIPARYPSQRYPGKPLVPLTGATGESRTLIERSW-RAALEVGGDARVVVATDDGRIADAA 64
Query: 107 QQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAA 166
FGA+V+MTS+ CRNGTERC EAL L YDIVVN+QGD PL P ++ +V L A
Sbjct: 65 TGFGAEVVMTSDRCRNGTERCAEALDALGGGYDIVVNLQGDAPLTPPWFVEALVADLSAH 124
Query: 167 PDAVFSTAVTSL--KPEDAFDPNR-------VKCVVDNHGYAIYFSRGLIPYNKS--GKV 215
P A +T V + + F +R V A+YFS+ +IPY G
Sbjct: 125 PVAEVATPVLRCDGRALNGFLEDRRAGRVGGTTAVFGIDRNALYFSKEVIPYTSRDYGAA 184
Query: 216 NPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHG 275
P P H+G+ +Y + L YP P PL+ E LEQL+ LE G + ++V EA G
Sbjct: 185 EPT-PVFHHVGVYAYRPSALAAYPRWEPGPLERLEGLEQLRFLERGIHLTCVEV--EARG 241
Query: 276 -----VDAPEDVEKIESFMRERNLS 295
++ PEDV +IE+ + E L+
Sbjct: 242 RPFWELNNPEDVPRIEAMLTEAGLA 266
>gi|381150952|ref|ZP_09862821.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Methylomicrobium
album BG8]
gi|380882924|gb|EIC28801.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Methylomicrobium
album BG8]
Length = 256
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 93/246 (37%), Positives = 145/246 (58%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ S+R GKPL+ I G+PMI ER++ A D +VVATDD++I + + G +
Sbjct: 8 VIPARYGSTRLPGKPLLPIAGRPMIAHVCERAREAGA-DEIVVATDDDRICQAVRALGIE 66
Query: 113 VIMTSESCRNGTERCNEAL-QKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
+MT ++GTER E + Q+ +I+VN+QGDEPLI+P + L A
Sbjct: 67 AVMTRADHQSGTERIAEVVEQRGWAGGEIIVNLQGDEPLIDPAYLRETAAVLAGQRQAGI 126
Query: 172 STAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSG------KVNPQFPYLLH 224
+T + E+ F+PN VK V++ HG+A+YFSR IP+++ G ++ + PY H
Sbjct: 127 ATLAAEIHDGEEIFNPNAVKVVLNRHGHALYFSRAPIPWDRDGFAEGRKLLSGRMPYYRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDH-EAHGVDAPEDVE 283
+G+ +Y +FL+ Y G + L+ E LEQL++L G + V VD GVD ED++
Sbjct: 187 IGMYAYTVDFLRRYCGWEASDLEKTESLEQLRILWQGEAIAVKVVDKVPPAGVDTFEDLQ 246
Query: 284 KIESFM 289
++E F+
Sbjct: 247 RVEEFL 252
>gi|194334665|ref|YP_002016525.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Prosthecochloris
aestuarii DSM 271]
gi|238693308|sp|B4S4I2.1|KDSB_PROA2 RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|194312483|gb|ACF46878.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Prosthecochloris
aestuarii DSM 271]
Length = 249
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 98/248 (39%), Positives = 147/248 (59%), Gaps = 11/248 (4%)
Query: 50 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQF 109
+V +IPAR SSR K L +I G P+I RTW++++ ++ +V+ATD E+IA +
Sbjct: 6 IVILIPARLNSSRLPNKMLADIEGAPLIVRTWQQAQQSSLTRQVVIATDSEEIAGVMKAC 65
Query: 110 GADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKAL--QAAP 167
GADV+MTS R GTER EA + ++ D+ VN+QGDEPLI+P ID V+K + P
Sbjct: 66 GADVVMTSPDARCGTERIAEAAENIDA--DVFVNLQGDEPLIDPGNIDLVIKPFLQENPP 123
Query: 168 DAVFSTAVTSLKPED---AFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLH 224
D ST V L ED DPN VK V+D+ A+YFSR +PY + + H
Sbjct: 124 DC--STLVYRLLAEDYAALHDPNIVKVVMDSQSNALYFSRSPLPYQRETYAATRC--FRH 179
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEK 284
+GI ++ + L+++ P+ L+ E LEQL+++ENGY ++ ++ D + GV+ ED+E
Sbjct: 180 IGIYAFRAGVLRMFSEHGPSMLEEAESLEQLRLVENGYSIRCVETDVDMPGVNTHEDLEL 239
Query: 285 IESFMRER 292
+ R R
Sbjct: 240 VRRLYRSR 247
>gi|432373541|ref|ZP_19616576.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE11]
gi|430894582|gb|ELC16870.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE11]
Length = 246
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 89/242 (36%), Positives = 143/242 (59%), Gaps = 5/242 (2%)
Query: 48 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQ 107
S+ V +IPAR+ SSR GKPL++I+GKPMIQ +ER+ + + VATDD ++ + Q
Sbjct: 2 SKAVIVIPARYGSSRLPGKPLLDIVGKPMIQHVYERALQVAGVAEVWVATDDPRVEQAVQ 61
Query: 108 QFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
FG IMT +GT+R E + +E DI +N+QGDEP+I P ++ +++ ++ P
Sbjct: 62 AFGGKAIMTRTDHESGTDRLVEVMHTVEA--DIYINLQGDEPMIRPRDVETLLQGMRDDP 119
Query: 168 DAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+T ++ E+A +P+ VK VV+ A+YFSR IPY ++ + + YL H+GI
Sbjct: 120 ALPVATLCHAISAEEATEPSTVKVVVNTRQDALYFSRSPIPYPRNAE---KARYLKHVGI 176
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
+Y + L+ Y L + L+ E LEQL+++ G ++ +V GVD P +EK+ +
Sbjct: 177 YAYRRDVLQNYSQLPESMLEQAESLEQLRLMNAGINIRTFEVAATGPGVDTPACLEKVRA 236
Query: 288 FM 289
M
Sbjct: 237 LM 238
>gi|254514448|ref|ZP_05126509.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [gamma
proteobacterium NOR5-3]
gi|219676691|gb|EED33056.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [gamma
proteobacterium NOR5-3]
Length = 273
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 105/256 (41%), Positives = 146/256 (57%), Gaps = 18/256 (7%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V +IPAR+AS+R GKPL I GK M+Q +ER+K A +VVATDD +IA C FG
Sbjct: 4 VVVIPARYASTRLPGKPLSMIAGKTMLQHVFERAKTAGA-SRVVVATDDSRIASACAGFG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKAL---QAA 166
A+ +MTS +GT+R E +++L D IVVN+QGDEP+I +ID V L Q A
Sbjct: 63 AEALMTSPDHASGTDRLAEVVEQLMLSDDQIVVNVQGDEPMIPAAVIDQVAYNLAREQTA 122
Query: 167 PDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVN----PQFPYL 222
A A+TS+ E DPN VK V D G A+YFSR IP+ + + P Y
Sbjct: 123 SIATLCEAITSV--EVLRDPNAVKVVFDEKGKALYFSRASIPWPRDHSWDSTDMPGGLYY 180
Query: 223 LHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAH----GVDA 278
H+G+ +Y + FL+ Y P PL+L E LEQL+ L YK + I V+ G+D
Sbjct: 181 RHIGLYAYRAAFLRRYTQWQPAPLELCESLEQLRAL---YKGEGIHVEQACEAVPGGIDT 237
Query: 279 PEDVEKIESFMRERNL 294
ED++++ + E ++
Sbjct: 238 AEDLQRVRAQFGESSI 253
>gi|62258335|gb|AAX77783.1| unknown protein [synthetic construct]
Length = 285
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 101/246 (41%), Positives = 142/246 (57%), Gaps = 13/246 (5%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR S+R K L +I GKPMIQR +E+ + D +++ATD +KI + + FGA
Sbjct: 33 VIPARLKSTRLPNKMLADIAGKPMIQRVYEQVT-KSKFDSIIIATDSQKIKDIAKSFGAK 91
Query: 113 VIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V++T + ++GT+R EA+ KL DIVVN+QGDEPLI E I+ + L +AV
Sbjct: 92 VVLTRDDHQSGTDRIAEAVSKLGFADEDIVVNVQGDEPLIPIENIEQAAQLLIDKSEAVV 151
Query: 172 STAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF---PYLLHLGI 227
ST + ED ++PN VK V D + YA+YFSR IP+ + Q + H+GI
Sbjct: 152 STLCEKITDVEDIYNPNNVKVVFDKNNYALYFSRASIPFERGFSEKEQINISEFFRHIGI 211
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAH----GVDAPEDVE 283
+Y FLK Y L +P++ E LEQLKVL NGYK I ++ A GVD +D+E
Sbjct: 212 YAYRVAFLKHYAELTVSPIEKYEALEQLKVLYNGYK---IAIEQSAKSTPAGVDTLQDLE 268
Query: 284 KIESFM 289
K+
Sbjct: 269 KVRKLF 274
>gi|299530069|ref|ZP_07043496.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Comamonas
testosteroni S44]
gi|298722049|gb|EFI62979.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Comamonas
testosteroni S44]
Length = 258
Score = 170 bits (431), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 101/252 (40%), Positives = 141/252 (55%), Gaps = 16/252 (6%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR +S+R GKPL +I G PM+ R +R+ LA T VVA DDE I C + G
Sbjct: 6 LIPARLSSTRLPGKPLADIAGLPMVVRVAQRAALAGTA-RCVVAADDESIVAACARHGVQ 64
Query: 113 VIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
I+T + +G++R EA +L D+VVN+QGDEPLI+P++I+ V + L A P+A
Sbjct: 65 AILTRKDHPSGSDRLAEACAQLGLSGDDVVVNVQGDEPLIDPKLIEAVAQLLLARPEASM 124
Query: 172 STAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS-------GKVNPQ----- 218
TA + D +PN VK V D G A YFSR IP + P+
Sbjct: 125 GTAAHPIDSLTDYRNPNVVKVVCDAKGLASYFSRAPIPCARDHGDEAWWQTAAPRAGHTG 184
Query: 219 FPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVD 277
F L H+GI SY + FL+ +P L P P + E LEQL+ L +G+++ V I D GVD
Sbjct: 185 FTPLRHIGIYSYKAGFLREFPQLAPAPTEAMEQLEQLRALWHGHRIAVHITPDAPGAGVD 244
Query: 278 APEDVEKIESFM 289
PED+E++ +
Sbjct: 245 TPEDLERVRAVF 256
>gi|170680703|ref|YP_001745205.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
SMS-3-5]
gi|170518421|gb|ACB16599.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase KpsU [Escherichia
coli SMS-3-5]
Length = 246
Score = 170 bits (431), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 90/242 (37%), Positives = 143/242 (59%), Gaps = 5/242 (2%)
Query: 48 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQ 107
S+ V +IPAR+ SSR GKPL++I+GKPMIQ +ER+ + + VATDD ++ + Q
Sbjct: 2 SKAVIVIPARYGSSRLPGKPLLDIVGKPMIQHVYERALQVAGVAEVWVATDDPRVEKAVQ 61
Query: 108 QFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
FG IMT +GT+R E + K+E DI +N+QGDEP+I P ++ +++ ++
Sbjct: 62 AFGGKAIMTRNDHESGTDRLVEVMHKVEA--DIYINLQGDEPMIRPRDVETLLQGMRDDT 119
Query: 168 DAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+T ++ E+A +P+ VK VV+ A+YFSR IPY ++ + + YL H+GI
Sbjct: 120 ALPVATLCHAISAEEATEPSTVKVVVNTRQDALYFSRSPIPYPRNAE---KARYLKHVGI 176
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
+Y + L+ Y L T L E+LEQL+++ G ++ +V GVD P +EK+ +
Sbjct: 177 YAYRRDVLQNYSQLPRTALSQIEELEQLRLMNAGINIRTFEVTATGPGVDTPACLEKVRA 236
Query: 288 FM 289
M
Sbjct: 237 LM 238
>gi|220934548|ref|YP_002513447.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Thioalkalivibrio
sulfidophilus HL-EbGr7]
gi|254807769|sp|B8GR40.1|KDSB_THISH RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|219995858|gb|ACL72460.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Thioalkalivibrio
sulfidophilus HL-EbGr7]
Length = 250
Score = 170 bits (431), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 97/244 (39%), Positives = 144/244 (59%), Gaps = 8/244 (3%)
Query: 54 IPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADV 113
IPAR+AS+R GKPL+ + GKPMIQ ER+ LA + +V+ATDD +I++ + FGA V
Sbjct: 7 IPARYASTRLPGKPLLMLGGKPMIQHVHERA-LACGAEEVVIATDDTRISDVAEGFGARV 65
Query: 114 IMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFS 172
++T +G++R E +L + DIVVN+QGDEPL P+I+ V +AL+ DA +
Sbjct: 66 VLTDAHHESGSDRIAEVATELGWRDDDIVVNLQGDEPLTPPDILHQVAEALERHTDAAMA 125
Query: 173 TAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYL----LHLGI 227
T T ++ E DPN VK V D YA+YFSR IP++++ + L H+G+
Sbjct: 126 TLCTPIETVEQMLDPNVVKVVRDAADYALYFSRAPIPWDRNVGRDVTHRSLEGCHRHIGL 185
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKIE 286
+Y FLK + + P L+L E LEQL+ L G +++ + GVD DVE++E
Sbjct: 186 YAYRVGFLKAFAAMSPCALELTERLEQLRALHAGARIQCPVASQVPGQGVDVSSDVERVE 245
Query: 287 SFMR 290
+R
Sbjct: 246 KLLR 249
>gi|408481340|ref|ZP_11187559.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas sp.
R81]
Length = 254
Score = 170 bits (431), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 99/246 (40%), Positives = 146/246 (59%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IP+R+AS+R GKPL I KPMIQR WE++ ++ + +VVATDD +I E C+ FGA+
Sbjct: 8 VIPSRYASTRLPGKPLQLIGDKPMIQRVWEQA-CKSSAERVVVATDDPRIIEACKGFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
++T E +GT+R E +L D IVVN+QGDEPLI P +ID V L A +A
Sbjct: 67 AVLTREDHNSGTDRLAEVATQLGLAPDAIVVNVQGDEPLIPPSVIDQVAANLAAHGEARM 126
Query: 172 STAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSG-----KVNPQ-FPYLLH 224
+T ++ E F+PN VK V D +G A+ FSR ++P+ + V P+ PY H
Sbjct: 127 ATLAEPIEDIETLFNPNVVKVVSDINGLALTFSRSVLPWARDAFAKKPDVLPEGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVE 283
+GI +Y + FL + P L+ E LEQL+ L +G ++ V ++ GVD PED+E
Sbjct: 187 IGIYAYRAGFLHDFVSWGPCWLENTESLEQLRALWHGVRIHVGDALEAPPAGVDTPEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|404396917|ref|ZP_10988711.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Ralstonia sp.
5_2_56FAA]
gi|348617109|gb|EGY66590.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Ralstonia sp.
5_2_56FAA]
Length = 268
Score = 170 bits (431), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 95/256 (37%), Positives = 141/256 (55%), Gaps = 16/256 (6%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
+ +IPAR AS+R KPL +I GKPM+ R ER+ ++ +VVATD +A+ C Q
Sbjct: 7 IAVIPARLASTRLPNKPLADIDGKPMVVRVAERTHQSSAA-RVVVATDAASVADACMQHH 65
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+ ++T +GT+R E L D IVVN+QGDEPLI P +ID V L+ PD
Sbjct: 66 VEAVLTRADHASGTDRLAEVATVLGLPDDAIVVNVQGDEPLIAPTLIDNVAAHLRDHPDC 125
Query: 170 VFSTAVTSLK-PEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK------------SGKVN 216
+TA + P D F+PN VK V+D A+ FSR +P+ + + +
Sbjct: 126 AIATAAHPIHDPADVFNPNVVKVVLDAADRALLFSRAPLPWARDTWTPAVMAQPVAERPL 185
Query: 217 PQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHE-AHG 275
P P L H+GI +Y + FL+ +P L P++ E LEQL+ + +G ++ V+ D A G
Sbjct: 186 PAMPVLRHIGIYAYRAGFLRRFPQLAAAPIEQTEQLEQLRAMWHGERIAVLTTDDAPAAG 245
Query: 276 VDAPEDVEKIESFMRE 291
VD PED+ ++ + E
Sbjct: 246 VDTPEDLARVRAAWAE 261
>gi|165975542|ref|YP_001651135.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|190149354|ref|YP_001967879.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|303250219|ref|ZP_07336420.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|303251908|ref|ZP_07338079.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|238687513|sp|B0BRZ1.1|KDSB_ACTPJ RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|238692369|sp|B3GZS5.1|KDSB_ACTP7 RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|165875643|gb|ABY68691.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|189914485|gb|ACE60737.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|302649338|gb|EFL79523.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|302650930|gb|EFL81085.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
Length = 250
Score = 170 bits (431), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 97/245 (39%), Positives = 142/245 (57%), Gaps = 9/245 (3%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR+ASSR KPL++I GKPMIQ WE+++ A +++ATD +I + FGA+
Sbjct: 6 IIPARYASSRLPRKPLLDIAGKPMIQHVWEKAQQAGA-TRVIIATDHPEIEATAKAFGAE 64
Query: 113 VIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS+ +GTER E ++K++ +I+VN+QGDEPLI P I+ V + L +
Sbjct: 65 VCMTSDQHNSGTERLAEVIEKMQIADNEIIVNVQGDEPLIPPVIVSQVAENLDRCQVNMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS--GKVNPQF----PYLLHL 225
+ AV E+ F+PN VK + D +G A+YFSR IP+ + + F YL H+
Sbjct: 125 TLAVKLTTKEELFNPNAVKALADKNGMALYFSRAPIPFARDHFADCDDAFVASQNYLRHI 184
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAH-GVDAPEDVEK 284
GI +Y + F+K Y PT L+ E LEQL+ L G K+ + GVD ED+E+
Sbjct: 185 GIYAYRAGFVKQYVAWQPTQLEQLESLEQLRALWYGEKIHIELAKQAPQVGVDTQEDLER 244
Query: 285 IESFM 289
+ +
Sbjct: 245 VRRIL 249
>gi|406676578|ref|ZP_11083764.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Aeromonas veronii
AMC35]
gi|423209143|ref|ZP_17195697.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Aeromonas veronii
AER397]
gi|404618988|gb|EKB15908.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Aeromonas veronii
AER397]
gi|404626801|gb|EKB23611.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Aeromonas veronii
AMC35]
Length = 254
Score = 170 bits (431), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 101/245 (41%), Positives = 146/245 (59%), Gaps = 7/245 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V +IPAR+AS+R GKPL +I GKPM+Q E++ L + D ++VATDD ++ + G
Sbjct: 4 VVVIPARYASTRLPGKPLADIHGKPMVQHVVEKA-LQSGADRVIVATDDARVQQALLTTG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MTS ++GTER E + D I+VN+QGDEPLI P II V L AA
Sbjct: 63 VEVCMTSPDHQSGTERLAEVCRHYGFAADTIIVNVQGDEPLIPPAIIRQVADNLAAATAP 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS--GKVNPQF--PYLLHL 225
+ + +V E+AF+PN VK V D GYA+YFSR IP+++ K + Q Y H+
Sbjct: 123 MATLSVPIKDAEEAFNPNAVKVVTDKDGYALYFSRASIPWDRDRFAKSHEQIGDHYQRHI 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIK-VDHEAHGVDAPEDVEK 284
GI +Y + F++ Y P+ L+ E LEQL+VL G K+ V + ++ GVD D+EK
Sbjct: 183 GIYAYRAGFIQRYVDWAPSVLEQVEALEQLRVLWYGEKIHVAQALEAPPVGVDTQADLEK 242
Query: 285 IESFM 289
+ +F+
Sbjct: 243 VRAFL 247
>gi|126738434|ref|ZP_01754139.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Roseobacter sp.
SK209-2-6]
gi|126720233|gb|EBA16939.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Roseobacter sp.
SK209-2-6]
Length = 266
Score = 170 bits (431), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 101/258 (39%), Positives = 144/258 (55%), Gaps = 18/258 (6%)
Query: 50 VVGIIPARFASSRFEGKPLVNILG-----KPMIQRTWERSKLATTLDHLVVATDDEKIAE 104
V+ +IPAR+ASSR+ GKPL + G + +I+R+W + +D +VVATDD++I E
Sbjct: 3 VLLVIPARYASSRYPGKPLAELTGATGEKRTLIERSWRAACKVQGIDRVVVATDDDRIKE 62
Query: 105 CCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQ 164
+ FGA+V+MTSESC NGTERC EA Q L YDIVVN+QGD PL I+ +V AL+
Sbjct: 63 AAEAFGAEVVMTSESCGNGTERCAEAHQVLGGGYDIVVNLQGDAPLTPHWFIEDLVSALR 122
Query: 165 AAPDAVFSTAV---------TSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPY-NKSGK 214
AP+ +T V + L V G A+YFS+ +IP+ ++
Sbjct: 123 EAPEMGLATPVLQCDGAALNSLLTDRKEGRVGGTTAVFGTGGRALYFSKEVIPFCSERFA 182
Query: 215 VNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKV---DH 271
+ P H+G+ +Y + L Y PL+ E LEQL+ LENG + ++V
Sbjct: 183 DDASTPVFHHVGVYAYRPDALAAYSDWEVGPLEQLEGLEQLRFLENGRNVLCVEVAAQGR 242
Query: 272 EAHGVDAPEDVEKIESFM 289
E ++ PEDV KIE+ M
Sbjct: 243 EFWELNNPEDVGKIEAMM 260
>gi|432816731|ref|ZP_20050492.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE115]
gi|432835914|ref|ZP_20069448.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE136]
gi|432888261|ref|ZP_20102013.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE158]
gi|431361732|gb|ELG48311.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE115]
gi|431383969|gb|ELG68092.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE136]
gi|431414716|gb|ELG97267.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE158]
Length = 246
Score = 170 bits (431), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 89/242 (36%), Positives = 143/242 (59%), Gaps = 5/242 (2%)
Query: 48 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQ 107
S+ V +IPAR+ SSR GKPL++I+GKPMIQ +ER+ + + VATDD ++ + Q
Sbjct: 2 SKAVIVIPARYGSSRLPGKPLLDIVGKPMIQHVYERALQVAGVAEVWVATDDPRVEQAVQ 61
Query: 108 QFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
FG IMT +GT+R E + K+E DI +N+QGDEP+I P ++ +++ ++ P
Sbjct: 62 AFGGKAIMTRNDHESGTDRLVEVMHKVEA--DIYINLQGDEPMIRPRDVETLLQGMRDDP 119
Query: 168 DAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+T ++ E+A +P+ VK VV+ A+YFSR IPY ++ + + YL H+GI
Sbjct: 120 ALPVATLCHAISAEEAAEPSTVKVVVNTRQDALYFSRSPIPYPRNAE---KARYLKHVGI 176
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
+Y + L+ Y L + + E LEQL+++ G ++ +V GVD P +EK+ +
Sbjct: 177 YAYRRDVLQNYSQLPESMQEQAESLEQLRLMSAGINIRTFEVAATGPGVDTPACLEKVRA 236
Query: 288 FM 289
M
Sbjct: 237 LM 238
>gi|432560234|ref|ZP_19796891.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE49]
gi|431089392|gb|ELD95210.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE49]
Length = 246
Score = 170 bits (431), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 89/242 (36%), Positives = 143/242 (59%), Gaps = 5/242 (2%)
Query: 48 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQ 107
S+ V +IPAR+ SSR GKPL++I+GKPMIQ +ER+ + + VATDD ++ + Q
Sbjct: 2 SKAVIVIPARYGSSRLPGKPLLDIVGKPMIQHVYERALQVAGVAEVWVATDDPRVEQAVQ 61
Query: 108 QFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
FG IMT +GT+R E + K+E DI +N+QGDEP+I P ++ +++ ++ P
Sbjct: 62 AFGGKAIMTRNDHESGTDRLVEVMHKVEA--DIYINLQGDEPMIRPRDVETLLQGMRDDP 119
Query: 168 DAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+T ++ E+A +P+ VK VV+ A+YFSR IPY ++ + + YL H+GI
Sbjct: 120 ALPVATLCHAISAEEATEPSTVKVVVNTRQDALYFSRSPIPYPRNAE---KARYLKHVGI 176
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
+Y + L+ Y L + + E LEQL+++ G ++ +V GVD P +EK+ +
Sbjct: 177 YAYRRDVLQNYSQLPESMQEQAESLEQLRLMSAGINIRTFEVAATGPGVDTPACLEKVRA 236
Query: 288 FM 289
M
Sbjct: 237 LM 238
>gi|407692939|ref|YP_006817728.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Actinobacillus
suis H91-0380]
gi|407388996|gb|AFU19489.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Actinobacillus
suis H91-0380]
Length = 250
Score = 170 bits (431), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 98/245 (40%), Positives = 141/245 (57%), Gaps = 9/245 (3%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR+ASSR KPL++I GKPMIQ WE+++ A +++ATD +I + FGA+
Sbjct: 6 IIPARYASSRLPRKPLLDIAGKPMIQHVWEKAQQAGA-TRVIIATDHPEIEATAKAFGAE 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS+ +GTER E ++K+ D I+VN+QGDEPLI P I+ V + L +
Sbjct: 65 VCMTSDQHNSGTERLAEVIEKMRIADDEIIVNVQGDEPLIPPVIVSQVAENLDRCQVNMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS--GKVNPQF----PYLLHL 225
+ AV E+ F+PN VK + D +G A+YFSR IP+ + + F YL H+
Sbjct: 125 TLAVKLTTKEELFNPNAVKALADKNGMALYFSRAPIPFARDHFADCDDAFVASQNYLRHI 184
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAH-GVDAPEDVEK 284
GI +Y + F+K Y PT L+ E LEQL+ L G K+ + GVD ED+E+
Sbjct: 185 GIYAYRAGFVKQYVAWQPTQLEQLESLEQLRALWYGEKIHIELAKQAPQVGVDTQEDLER 244
Query: 285 IESFM 289
+ +
Sbjct: 245 VRRIL 249
>gi|359800503|ref|ZP_09303044.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Achromobacter
arsenitoxydans SY8]
gi|359361486|gb|EHK63242.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Achromobacter
arsenitoxydans SY8]
Length = 254
Score = 170 bits (431), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 99/245 (40%), Positives = 139/245 (56%), Gaps = 10/245 (4%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
+ IIPAR AS+R KPL +I GKPM+ RT +R+ + L +ATDD ++ + Q G
Sbjct: 4 IAIIPARTASTRLPDKPLADIAGKPMVVRTADRAA-QSGASRLYIATDDARVQQAVQAHG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+MT GT+R EA++ L D IVVN+QGDEPLIEPE+ID V LQA P A
Sbjct: 63 LHALMTRADHPTGTDRLAEAVELLSLPDDAIVVNVQGDEPLIEPELIDAVAAKLQACPQA 122
Query: 170 VFSTAVTSLKPEDA-FDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ------FPYL 222
+T + L A F+PN VK V A+YFSR IP+ + + P L
Sbjct: 123 DIATCASPLADAQALFNPNVVKVVCAADDRALYFSRAPIPWARDALAGGERVLADGLPAL 182
Query: 223 LHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDH-EAHGVDAPED 281
H+G+ +Y ++FL+ YP L L+ E LEQL+ +E+G+ + V + A GVD P D
Sbjct: 183 HHIGLYAYRASFLRRYPTLPQGVLERFESLEQLRAMEHGHTIVVHRASTPPAAGVDTPAD 242
Query: 282 VEKIE 286
+E++
Sbjct: 243 LERVR 247
>gi|315637296|ref|ZP_07892515.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Arcobacter
butzleri JV22]
gi|315478460|gb|EFU69174.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Arcobacter
butzleri JV22]
Length = 243
Score = 170 bits (430), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 97/246 (39%), Positives = 145/246 (58%), Gaps = 11/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR SSRF K +V+ILG PM+ +T +K + LD +V+ATD ++ + Q+G D
Sbjct: 3 IIPARLNSSRFANKIMVDILGLPMVIKT---AKQVSNLDKVVIATDSLEVIDLASQYGFD 59
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
++TS S +GT+R NEA L D I+VN+Q DEP IEPE++ V+ ++ D+
Sbjct: 60 AVLTSTSHNSGTDRINEAANILNLSEDEIIVNVQADEPFIEPEVVQAVINRVKQIKDSNE 119
Query: 172 STAVTS----LKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+TS + E A DPN VK ++D AIYFSR IPY++ + Y HLGI
Sbjct: 120 DIMITSCFKEITSELADDPNHVKVILDELSNAIYFSRAKIPYHRDHHKDAS--YFGHLGI 177
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEK-IE 286
+ L + L+P+ L+ E LEQL+ ++NG K+ ++KV ++ G+D ED+ + I+
Sbjct: 178 YGFTKKSLNDFCKLNPSKLENIEKLEQLRAIDNGKKIAMVKVTSKSFGIDTQEDLNRAIK 237
Query: 287 SFMRER 292
F ER
Sbjct: 238 LFSNER 243
>gi|194436818|ref|ZP_03068918.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase KpsU [Escherichia
coli 101-1]
gi|194424300|gb|EDX40287.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase KpsU [Escherichia
coli 101-1]
Length = 246
Score = 170 bits (430), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 88/242 (36%), Positives = 144/242 (59%), Gaps = 5/242 (2%)
Query: 48 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQ 107
S+ V +IPAR+ SSR GKPL++I+GKPMIQ +ER+ + + VATDD+++ + Q
Sbjct: 2 SKAVIVIPARYGSSRLPGKPLLDIVGKPMIQHVYERALQVAGVAEVWVATDDQRVEKAVQ 61
Query: 108 QFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
FG IMT +GT+R E + K+E DI +N+QGDEP+I P ++ +++ ++ P
Sbjct: 62 AFGGKAIMTRNDHESGTDRLVEVMHKVEA--DIYINLQGDEPMIRPRDVETLLQGMRDDP 119
Query: 168 DAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+T ++ E+A +P+ VK VV+ A+YFSR IPY ++ + + YL H+GI
Sbjct: 120 ALPVATLCHAISAEEAAEPSTVKVVVNTRQDALYFSRSPIPYPRNAE---KARYLKHVGI 176
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
+Y + L+ Y L + + E LEQL+++ G ++ ++ GVD P +EK+ +
Sbjct: 177 YAYRRDVLQNYSQLPESMPEQAESLEQLRLMNAGINIRTFEIAATGPGVDTPACLEKVRA 236
Query: 288 FM 289
M
Sbjct: 237 LM 238
>gi|406980749|gb|EKE02312.1| hypothetical protein ACD_20C00400G0012 [uncultured bacterium]
Length = 249
Score = 170 bits (430), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 91/246 (36%), Positives = 144/246 (58%), Gaps = 5/246 (2%)
Query: 48 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQ 107
+++ IIPAR+ S+R GKPL+ + KP+IQ +E++ ++ + ++VATDDE I E
Sbjct: 4 NKIAIIIPARYGSTRLPGKPLIKVNDKPIIQWVYEKASMSKLANEVIVATDDENIYEAVN 63
Query: 108 QFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
FG V MTS ++G++R E + K +IVVN+QGDEPLI+P ID + L
Sbjct: 64 AFGGKVEMTSSHHQSGSDRIGEII-KNNPDMEIVVNVQGDEPLIDPNSIDRAINGLLDDN 122
Query: 168 DAVFSTAVTSLKPEDA-FDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLG 226
A +T + + +D +PN VK V+DN +A+YFSR +PY ++ Y H+G
Sbjct: 123 KADIATLIRGIDEKDEILNPNIVKVVLDNSNFALYFSRSPVPYERT---TGHAKYYAHIG 179
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIE 286
+ +Y L L + L+ E LEQL+ L+NG K+K ++VD++ G+D ED+ K
Sbjct: 180 LYAYRRESLLKMIELPQSDLEKAESLEQLRALQNGMKIKALQVDYKPIGIDTEEDLIKFR 239
Query: 287 SFMRER 292
++ E+
Sbjct: 240 EYLEEK 245
>gi|452747537|ref|ZP_21947332.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
stutzeri NF13]
gi|452008653|gb|EME00891.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
stutzeri NF13]
Length = 254
Score = 170 bits (430), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 97/246 (39%), Positives = 140/246 (56%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+AS+R GKPL +I GKPMIQ WE++ +T +V+ATDD +I E C FGA
Sbjct: 8 VIPARYASTRLPGKPLQDIAGKPMIQHVWEQAS-KSTAQRVVIATDDSRIVEACAAFGAQ 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V++T +GT+R E ++L D IVVN+QGDEPLI P +ID V L A +
Sbjct: 67 VVLTRPDHNSGTDRLAEVCEQLGLPSDAIVVNVQGDEPLIPPAVIDQVAANLAAHSEVAI 126
Query: 172 STAVTSLKPEDA-FDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ------FPYLLH 224
+T L A F+PN VK + D +G A+ FSR +P+ + + + PY H
Sbjct: 127 ATLAEPLADAQALFNPNVVKVLSDINGLALTFSRAPLPWARDAFASDRSALPVGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDAPEDVE 283
+GI +Y ++FL + P L+ E LEQL+ L +G ++ V V GVD ED+E
Sbjct: 187 IGIYAYRASFLADFVSWGPCWLEDTECLEQLRALWHGQRIHVADAVQAPPAGVDTVEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|422332425|ref|ZP_16413438.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
4_1_47FAA]
gi|373246457|gb|EHP65910.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
4_1_47FAA]
Length = 246
Score = 170 bits (430), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 89/242 (36%), Positives = 144/242 (59%), Gaps = 5/242 (2%)
Query: 48 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQ 107
S+ V +IPAR+ SSR GKPL++I+GKPMIQ +ER+ + + VATDD+++ + Q
Sbjct: 2 SKAVIVIPARYGSSRLPGKPLLDIVGKPMIQHVYERALQVAGVAEVWVATDDQRVEKAVQ 61
Query: 108 QFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
FG IMT +GT+R E + K+E DI +N+QGDEP+I P ++ +++ ++ P
Sbjct: 62 AFGGKAIMTRNDHESGTDRLVEVMYKVEA--DIYINLQGDEPMIRPRDVETLLQGMRDDP 119
Query: 168 DAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+T ++ E+A +P+ VK VV+ A+YFSR IPY ++ + + YL H+GI
Sbjct: 120 ALPVATLCHAISAEEATEPSTVKVVVNTRQDALYFSRSPIPYPRNAE---KARYLKHVGI 176
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
+Y + L+ Y L + + E LEQL+++ G ++ +V GVD P +EK+ +
Sbjct: 177 YAYRRDVLQNYSQLPESMPEQAESLEQLRLMNAGINIRTFEVAATGPGVDTPACLEKVRA 236
Query: 288 FM 289
M
Sbjct: 237 LM 238
>gi|354722808|ref|ZP_09037023.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Enterobacter mori
LMG 25706]
Length = 248
Score = 170 bits (430), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 99/243 (40%), Positives = 144/243 (59%), Gaps = 7/243 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPAR+AS+R GKPLV+I GKPMI ER++ + D ++VATD +A+ + G
Sbjct: 4 VVIIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGADRVIVATDHSDVAQAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D ++VN+QGDEP+I II V + L
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCGFSDDTVIVNVQGDEPMIPAVIIRQVAENLAQRQVG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS----GKVNPQFPYLLHL 225
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ K +L H+
Sbjct: 123 MATLAVPIHHAEEAFNPNAVKVVMDAEGYALYFSRATIPWDRDRFAVSKETIGDSFLRHI 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI Y + F++ Y P+PL+ E LEQL+VL G K+ V + + GVD PED+E+
Sbjct: 183 GIYGYRAGFIRRYVNWAPSPLEHIEMLEQLRVLWYGEKIHVAVAKEVPGTGVDTPEDLER 242
Query: 285 IES 287
+ +
Sbjct: 243 VRA 245
>gi|398869367|ref|ZP_10624741.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas sp.
GM78]
gi|398230624|gb|EJN16640.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas sp.
GM78]
Length = 254
Score = 170 bits (430), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 102/246 (41%), Positives = 145/246 (58%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+AS+R GKPL+ I GKPMIQ WE++ ++ +VVATDD +IA+ C+ FGA+
Sbjct: 8 VIPARYASTRLPGKPLLLIAGKPMIQHVWEQA-CKSSAQRVVVATDDARIAQACEGFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V+MT E +GT+R E KL D IVVN+QGDEPLI P +ID V L A +A
Sbjct: 67 VVMTREDHNSGTDRLAEVATKLGLAPDAIVVNVQGDEPLIPPSVIDQVAVNLAAHTEARM 126
Query: 172 STAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPY-----NKSGKVNPQ-FPYLLH 224
+T ++ E F+ N VK V D +G A+ FSR +P+ KS + P+ PY H
Sbjct: 127 ATLAEPIEDLESLFNTNVVKVVSDLNGLALTFSRATLPWARDTFAKSLEQMPEGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDAPEDVE 283
+GI +Y + FL + P L+ E LEQL+ L +G ++ V + GVD ED+E
Sbjct: 187 IGIYAYRAGFLHDFVSWGPCWLENTECLEQLRALWHGVRIHVADALIAPPAGVDTVEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|256822590|ref|YP_003146553.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Kangiella
koreensis DSM 16069]
gi|256796129|gb|ACV26785.1| 3-deoxy-D-manno-octulosonatecytidylyltransferase [Kangiella
koreensis DSM 16069]
Length = 256
Score = 170 bits (430), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 107/259 (41%), Positives = 147/259 (56%), Gaps = 13/259 (5%)
Query: 45 NFRSRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAE 104
+F+ +V +IPAR+AS+R GKPL I GKPMIQ +ER+ +A +VVATDDE++ E
Sbjct: 2 HFKDFIV-VIPARYASTRLPGKPLAMIGGKPMIQHVYERALMADA-KQVVVATDDERVEE 59
Query: 105 CCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKAL 163
+ FG DV MT E +G++R E +KL K + IVVN+QGDEP I PE I V + L
Sbjct: 60 AVKLFGGDVCMTREDHVSGSDRLAEVCEKLLLKPEMIVVNVQGDEPFISPENIRQVAENL 119
Query: 164 Q---AAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSG----KVN 216
A P A ST +T + + F+ N VK V D G A+YFSR IP+ + +V
Sbjct: 120 HQHTAFPMATLSTPIT--ESGEVFNSNVVKVVADEQGKALYFSRAPIPWQRGAFEEQRVQ 177
Query: 217 PQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHE-AHG 275
H+GI +Y + FL Y + P ++ E LEQL+VL +GY + V + G
Sbjct: 178 DIEHCQRHIGIYAYRAGFLAEYVKMSPAMIERMESLEQLRVLAHGYSIHVEQASEAPGLG 237
Query: 276 VDAPEDVEKIESFMRERNL 294
VD D+E E F R+ L
Sbjct: 238 VDTQADLEAAEQFYRKHRL 256
>gi|253990292|ref|YP_003041648.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Photorhabdus
asymbiotica]
gi|253781742|emb|CAQ84905.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Photorhabdus
asymbiotica]
Length = 249
Score = 170 bits (430), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 98/245 (40%), Positives = 140/245 (57%), Gaps = 7/245 (2%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPARFAS+R GKPL +I GKPMI R ER+ + + ++VATD+ + G +
Sbjct: 5 IIPARFASTRLPGKPLADIHGKPMIVRVMERA-MRSGAKRVIVATDNHDVVAAVIAAGGE 63
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
+T+E+ +GTER E + K + D I+VN+QGDEPLI EII V + L +
Sbjct: 64 ACLTNENHHSGTERLAEVIDKYQFADDEIIVNVQGDEPLIPEEIIKQVAENLAGCDAGMA 123
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP----YLLHLGI 227
+ AV E+AF+PN VK V+D GYA+YFSR IP+ + + + +L H+GI
Sbjct: 124 TLAVQIHHAEEAFNPNAVKVVMDKQGYALYFSRATIPWERDRFIRSRETIGDNFLRHIGI 183
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKIE 286
+Y + F++ Y P+PL+ E LEQL+VL G K+ V + GVD PED+ +
Sbjct: 184 YAYRAGFIRRYVQWEPSPLEQIEMLEQLRVLWYGEKIHVATALQAPGAGVDTPEDLAAVR 243
Query: 287 SFMRE 291
E
Sbjct: 244 KAFTE 248
>gi|432357252|ref|ZP_19600496.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE4]
gi|430879118|gb|ELC02475.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE4]
Length = 248
Score = 170 bits (430), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 101/248 (40%), Positives = 144/248 (58%), Gaps = 11/248 (4%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPAR+AS+R GKPLV+I G PMI ER++ + + ++VATD E +A + G
Sbjct: 4 VVIIPARYASTRLPGKPLVDINGNPMIVHVLERAR-ESGAERIIVATDHEDVARAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D ++VN+QGDEP+I II V L
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSG------KVNPQFPYLL 223
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ V F L
Sbjct: 123 MATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAKDLETVGDNF--LR 180
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDV 282
HLGI Y + F++ Y P+PL+ E LEQL+VL G K+ V + + GVD PED+
Sbjct: 181 HLGIYGYRAGFIRRYVTWQPSPLEHIEMLEQLRVLWYGEKIHVAVAQEVPGTGVDTPEDL 240
Query: 283 EKIESFMR 290
+++ + MR
Sbjct: 241 KRVRAEMR 248
>gi|253996024|ref|YP_003048088.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Methylotenera
mobilis JLW8]
gi|253982703|gb|ACT47561.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Methylotenera
mobilis JLW8]
Length = 261
Score = 170 bits (430), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 98/246 (39%), Positives = 149/246 (60%), Gaps = 11/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR++S+R GKPL++I GKPM+ ER+K ++ ++VATDDE++A +Q G
Sbjct: 17 VIPARYSSTRLPGKPLLDIAGKPMVVWVAERAK-SSGAKQVIVATDDERVATAVRQHGHA 75
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD--IVVNIQGDEPLIEPEIIDGVVKALQAAPDAV 170
+MT +GT+R E + +E D IVVN+QGDEPLI+ ++I V L A+ AV
Sbjct: 76 AVMTDAHHVSGTDRIAE-VAAIEGWRDDAIVVNVQGDEPLIDAKLIIEVATTLAASSHAV 134
Query: 171 FSTAVTSLKPEDAF-DPNRVKCVVDNHGYAIYFSRGLIP-----YNKSGKVNPQFPYLLH 224
+TA ++ + F +PN VK V D +G+A+YFSR IP Y+ + ++ P H
Sbjct: 135 MATACHTITEKADFTNPNVVKVVTDVNGHAMYFSRAPIPFPRDTYSSANELVSGIPAYRH 194
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVE 283
+GI +Y ++FLK Y L P ++ E LEQL+VL GYK+ V + + A GVD D+
Sbjct: 195 IGIYAYRASFLKQYASLAPAAIEQFECLEQLRVLYQGYKIAVSVSENAPAAGVDTESDLA 254
Query: 284 KIESFM 289
++ + M
Sbjct: 255 RVRALM 260
>gi|254369552|ref|ZP_04985563.1| hypothetical protein FTAG_01438 [Francisella tularensis subsp.
holarctica FSC022]
gi|157122506|gb|EDO66641.1| hypothetical protein FTAG_01438 [Francisella tularensis subsp.
holarctica FSC022]
Length = 250
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/246 (40%), Positives = 142/246 (57%), Gaps = 13/246 (5%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR S+R K L +I GKPMIQR +E+ + D +++ATD +KI + + FGA
Sbjct: 7 VIPARLKSTRLPNKMLADIAGKPMIQRVYEQVT-KSKFDSIIIATDSQKIKDIAESFGAK 65
Query: 113 VIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V++T + ++GT+R EA+ KL DIVVN+QGDEPLI E I+ + L +AV
Sbjct: 66 VVLTRDDHQSGTDRIAEAVTKLGFADEDIVVNVQGDEPLIPIENIEQAEQLLIDKSEAVV 125
Query: 172 STAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF---PYLLHLGI 227
ST + ED ++PN VK V D + YA+YFSR IP+ + Q + H+GI
Sbjct: 126 STLCEKITDVEDIYNPNNVKVVFDKNNYALYFSRASIPFERGFSEKEQINISEFFRHIGI 185
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAH----GVDAPEDVE 283
+Y FLK Y L +P++ E LEQL+VL NGYK I ++ A GVD +D+E
Sbjct: 186 YAYRVAFLKHYAELTVSPIEKYEALEQLRVLYNGYK---IAIEQSAKSTPAGVDTLQDLE 242
Query: 284 KIESFM 289
K+
Sbjct: 243 KVRKLF 248
>gi|153007156|ref|YP_001381481.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Anaeromyxobacter
sp. Fw109-5]
gi|229830636|sp|A7HIF1.1|KDSB_ANADF RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|152030729|gb|ABS28497.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Anaeromyxobacter
sp. Fw109-5]
Length = 244
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 97/241 (40%), Positives = 149/241 (61%), Gaps = 5/241 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
RV IIPARF + RF GKPL ++ G+P+I +R++ A +D + VATDD +IA +
Sbjct: 3 RVAVIIPARFGAQRFPGKPLADLAGQPLIAHVVDRARRARGVDAVAVATDDARIAAAAEA 62
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
GA I+T + GT+R EA +KL D+VVN+QGDEPLIEPE I+ +V+A++ +
Sbjct: 63 AGAAAILTGPAS-TGTDRVAEAARKLMPSPDVVVNLQGDEPLIEPEAIETLVRAMEGGVE 121
Query: 169 AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQ 228
+T L+PE+ VK V D HG A+YFSR IP+ ++G V+ H+GI
Sbjct: 122 --MATLARPLEPEELERTQVVKVVTDRHGDALYFSRAPIPHRRAGGVSAL--ARAHVGIY 177
Query: 229 SYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESF 288
++ + FL+ + L P L+ EE LEQL+ LE+G++++V + G+D PED+++ +
Sbjct: 178 AFTAAFLQEFAALPPGRLEAEESLEQLRALEHGHRIRVADTAYRGFGIDTPEDLDRARAL 237
Query: 289 M 289
+
Sbjct: 238 L 238
>gi|313683515|ref|YP_004061253.1| 3-deoxy-d-manno-octulosonatecytidylyltransferase [Sulfuricurvum
kujiense DSM 16994]
gi|313156375|gb|ADR35053.1| 3-deoxy-D-manno-octulosonatecytidylyltransferase [Sulfuricurvum
kujiense DSM 16994]
Length = 258
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 91/250 (36%), Positives = 144/250 (57%), Gaps = 7/250 (2%)
Query: 50 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQF 109
++ IIPAR SSRF GKP+ +I G PMI ++R K++ LD + VAT D+ I +
Sbjct: 3 IISIIPARMGSSRFPGKPMADICGMPMIGHVYKRVKMSKRLDEVYVATCDQVIFDYITSI 62
Query: 110 GADVIMTSESCRNGTERCNEALQKLE----KKYDIVVNIQGDEPLIEPEIIDGVVKALQA 165
G +MTS+ ++RC EA+ K+E +K DI+V +QGDEPL P++ID ++ +
Sbjct: 63 GGKAVMTSDCHERCSDRCAEAMLKIEATSGEKCDIMVMVQGDEPLTFPQMIDEAIEPMIQ 122
Query: 166 APDAVFSTAVTSLKPEDAFD-PNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLH 224
V + V L+ +AF+ PN VK V+D G+A+YFSR IP K G ++ P
Sbjct: 123 DNSLVITNLVADLESIEAFENPNEVKVVMDKQGFALYFSREPIPSRKKGVLD--VPMKKQ 180
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEK 284
+ + + +FL Y + PTPL++ E ++ +++LEN K+K+I + VD ED+
Sbjct: 181 VCVIPFTRDFLLEYNAMEPTPLEIIESVDMMRILENAQKVKMIPTQYVTKAVDTQEDLNT 240
Query: 285 IESFMRERNL 294
+ + M + L
Sbjct: 241 VNAMMSQDPL 250
>gi|426410947|ref|YP_007031046.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas sp.
UW4]
gi|426269164|gb|AFY21241.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas sp.
UW4]
Length = 254
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 101/246 (41%), Positives = 145/246 (58%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IP+R+AS+R GKPL+ I GKPMIQ WE++ ++ +VVATDD +I E C FGA+
Sbjct: 8 VIPSRYASTRLPGKPLLLIAGKPMIQHVWEQAS-KSSAGRVVVATDDARIVEACNGFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V++T E +GT+R E KL D IVVN+QGDEPLI P +ID V L A +A
Sbjct: 67 VVLTREDHNSGTDRLAEVAMKLGLAPDAIVVNVQGDEPLIPPSVIDQVAANLAAHAEARM 126
Query: 172 STAVTSLKPEDA-FDPNRVKCVVDNHGYAIYFSRGLIPYNKSG-KVNPQ-----FPYLLH 224
+T ++ D F+PN VK V D +G A+ FSR +P+ + VNP+ PY H
Sbjct: 127 ATLAEPIEDADTLFNPNVVKVVSDLNGLALTFSRSTLPWARDAFAVNPEQLPEGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDAPEDVE 283
+GI +Y + FL+ + P L+ E LEQL+ L +G ++ V + GVD ED+E
Sbjct: 187 IGIYAYRAGFLQDFVNWGPCWLENTECLEQLRALWHGVRIHVADALIAPPAGVDTAEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|386625755|ref|YP_006145483.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O7:K1 str. CE10]
gi|423702453|ref|ZP_17676885.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
H730]
gi|433121512|ref|ZP_20307175.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE157]
gi|349739491|gb|AEQ14197.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
O7:K1 str. CE10]
gi|385709945|gb|EIG46937.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
H730]
gi|431640283|gb|ELJ08043.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE157]
Length = 246
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 89/242 (36%), Positives = 143/242 (59%), Gaps = 5/242 (2%)
Query: 48 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQ 107
S+ V +IPAR+ SSR GKPL++I+GKPMIQ +ER+ + + VATDD ++ + Q
Sbjct: 2 SKAVIVIPARYGSSRLPGKPLLDIVGKPMIQHVYERALQVAGVAEVWVATDDPRVEKAVQ 61
Query: 108 QFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
FG IMT +GT+R E + K+E DI +N+QGDEP+I P ++ +++ ++ P
Sbjct: 62 AFGGKAIMTRNDHESGTDRLVEVMHKVEA--DIYINLQGDEPMIRPRDVETLLQGMRDDP 119
Query: 168 DAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+T ++ E+A +P+ VK VV+ A+YFSR IPY ++ + + YL H+GI
Sbjct: 120 ALPVATLCHAISAEEATEPSTVKVVVNTRQDALYFSRSPIPYPRNAE---KARYLKHVGI 176
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
+Y + L+ Y L + + E LEQL+++ G ++ +V GVD P +EK+ +
Sbjct: 177 YAYRRDVLQNYSQLPESMPEQAESLEQLRLMSAGINIRTFEVAATGPGVDTPACLEKVRT 236
Query: 288 FM 289
M
Sbjct: 237 LM 238
>gi|218701717|ref|YP_002409346.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
IAI39]
gi|218371703|emb|CAR19553.1| 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO
synthetase) [Escherichia coli IAI39]
Length = 246
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 89/242 (36%), Positives = 143/242 (59%), Gaps = 5/242 (2%)
Query: 48 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQ 107
S+ V +IPAR+ SSR GKPL++I+GKPMIQ +ER+ + + VATDD ++ + Q
Sbjct: 2 SKAVIVIPARYGSSRLPGKPLLDIVGKPMIQHVYERALQVAGVAEVWVATDDPRVEKAVQ 61
Query: 108 QFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
FG IMT +GT+R E + K+E DI +N+QGDEP+I P ++ +++ ++ P
Sbjct: 62 AFGGKAIMTRNDHESGTDRLVEGMHKVEA--DIYINLQGDEPMIRPRDVETLLQGMRDDP 119
Query: 168 DAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+T ++ E+A +P+ VK VV+ A+YFSR IPY ++ + + YL H+GI
Sbjct: 120 ALPVATLCHAISAEEATEPSTVKVVVNTRQDALYFSRSPIPYPRNAE---KARYLKHVGI 176
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
+Y + L+ Y L + + E LEQL+++ G ++ +V GVD P +EK+ +
Sbjct: 177 YAYRRDVLQNYSQLPESMPEQAESLEQLRLMSAGINIRTFEVAATGPGVDTPACLEKVRT 236
Query: 288 FM 289
M
Sbjct: 237 LM 238
>gi|110643177|ref|YP_670907.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
536]
gi|47155014|emb|CAE85213.1| KpsU protein [Escherichia coli]
gi|110344769|gb|ABG71006.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
536]
Length = 246
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 88/242 (36%), Positives = 143/242 (59%), Gaps = 5/242 (2%)
Query: 48 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQ 107
S+ V +IPAR+ SSR GKPL++I+GKPMIQ +ER+ + + VATDD ++ + Q
Sbjct: 2 SKAVIVIPARYGSSRLPGKPLLDIVGKPMIQHVYERALQVAGVAEVWVATDDPRVEQAVQ 61
Query: 108 QFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
FG IMT +GT+R E + K+E DI +N+QGDEP+I P ++ +++ ++ P
Sbjct: 62 AFGGKAIMTRNDHESGTDRLVEVMHKVEA--DIYINLQGDEPMIRPRDVETLLQGMRDDP 119
Query: 168 DAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+T ++ E+A +P+ VK V++ A+YFSR IPY ++ + + YL H+GI
Sbjct: 120 ALPVATLCHAISAEEATEPSTVKVVINTRQDALYFSRSPIPYPRNAE---KARYLKHVGI 176
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
+Y + L+ Y L + + E LEQL+++ G ++ +V GVD P +EK+ +
Sbjct: 177 YAYRRDVLQNYSQLPESMQEQAESLEQLRLMSAGINIRTFEVAATGPGVDTPACLEKVRA 236
Query: 288 FM 289
M
Sbjct: 237 LM 238
>gi|429094814|ref|ZP_19157331.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Cronobacter
dublinensis 1210]
gi|426740091|emb|CCJ83444.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Cronobacter
dublinensis 1210]
Length = 245
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 97/244 (39%), Positives = 144/244 (59%), Gaps = 7/244 (2%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR+AS+R GKPLV+I GKPMI ER++ + + ++VATD +A + G +
Sbjct: 3 IIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGAERIIVATDHPDVARAIEAAGGE 61
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MT ++GTER E ++K D ++VN+QGDEP+I P II V + L + +
Sbjct: 62 VCMTRADHQSGTERLAEVVEKCGFADDTVIVNVQGDEPMIPPAIIRQVAENLAGSQAGMA 121
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP----YLLHLGI 227
+ AV +AF+PN VK V+D GYA+YFSR IP+++ + +L H+GI
Sbjct: 122 TLAVPVHDAHEAFNPNAVKVVMDAQGYALYFSRATIPWDRDRFAQSRDTIGDSFLRHIGI 181
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVD-HEAHGVDAPEDVEKIE 286
Y + F++ Y +PL+ E LEQL+VL +G K+ V + GVD PED+E++
Sbjct: 182 YGYRAGFIRRYVTWPASPLEQIEMLEQLRVLWHGEKIHVAVAEVVPGTGVDTPEDLERVR 241
Query: 287 SFMR 290
+ MR
Sbjct: 242 AEMR 245
>gi|350545727|ref|ZP_08915186.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Candidatus
Burkholderia kirkii UZHbot1]
gi|350526490|emb|CCD40319.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Candidatus
Burkholderia kirkii UZHbot1]
Length = 263
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 97/257 (37%), Positives = 147/257 (57%), Gaps = 21/257 (8%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
+ +IPAR AS+R KPL +I GKPM+ R ER++ + ++VATD +++ E + G
Sbjct: 6 IAVIPARLASTRLPNKPLADIGGKPMVMRVAERAR-ESGASQVLVATDSDRVVEAVRDHG 64
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V+MT GT+R E +L D IVVN+QGDEPLI+P+++ L A P+
Sbjct: 65 IEVLMTRSDHPTGTDRLAEVATRLGWDDDAIVVNVQGDEPLIDPKLVRDAAAHLAAYPEC 124
Query: 170 VFSTAVTSLK-PEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS------------GKVN 216
+TA + P D F+PN VK V+D A+YFSR IP+ + GK+
Sbjct: 125 AIATAAHPIHDPADVFNPNVVKVVLDAKSVALYFSRAPIPWTRDLWQPHWPDIAALGKL- 183
Query: 217 PQFP--YLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEA- 273
P P L H+G+ +Y + FL+ +P L P++ E LEQL+ L +G ++ V +V H+A
Sbjct: 184 PSVPGNVLRHIGLYAYRAKFLRDFPNLAQAPIEAAEALEQLRALWHGERIAV-RVTHDAP 242
Query: 274 -HGVDAPEDVEKIESFM 289
GVD P D+E+++S
Sbjct: 243 PPGVDTPADLERVQSLF 259
>gi|261339252|ref|ZP_05967110.1| hypothetical protein ENTCAN_05488 [Enterobacter cancerogenus ATCC
35316]
gi|288319109|gb|EFC58047.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Enterobacter
cancerogenus ATCC 35316]
Length = 248
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 101/246 (41%), Positives = 145/246 (58%), Gaps = 7/246 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPAR+AS+R GKPLV+I GKPMI ER++ + + ++VATD +A + G
Sbjct: 4 VVIIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGAERVIVATDHPDVARAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D ++VN+QGDEP+I II V + L
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCGFSDDTVIVNVQGDEPMIPAVIIRQVAENLAQREVG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS----GKVNPQFPYLLHL 225
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ K +L HL
Sbjct: 123 MATLAVPIHHVEEAFNPNAVKVVMDAEGYALYFSRATIPWDRDRFAVSKEAIGDTFLRHL 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI Y + F++ Y P+PL+ E LEQL+VL G K+ V + + GVD PED+E+
Sbjct: 183 GIYGYRAGFIRRYVTWAPSPLEHIEMLEQLRVLWYGEKIHVAVAQEVPGTGVDTPEDLER 242
Query: 285 IESFMR 290
+ + MR
Sbjct: 243 VRAEMR 248
>gi|115375221|ref|ZP_01462487.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Stigmatella
aurantiaca DW4/3-1]
gi|310818940|ref|YP_003951298.1| 3-deoxy-d-manno-octulosonate cytidylyltransferase [Stigmatella
aurantiaca DW4/3-1]
gi|115367783|gb|EAU66752.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Stigmatella
aurantiaca DW4/3-1]
gi|309392012|gb|ADO69471.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Stigmatella
aurantiaca DW4/3-1]
Length = 250
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 92/246 (37%), Positives = 135/246 (54%), Gaps = 2/246 (0%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
R +IPAR AS+RF GKPL I GK M++ W R + A ++VAT+D +I E +
Sbjct: 5 RTAAVIPARHASTRFPGKPLARIAGKTMVEHVWRRCQEAQVFSEVLVATEDVRIQEEVTR 64
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG +MTS +C GT+R E + + D+ VN+QGDEPL++PE + V+ L P
Sbjct: 65 FGGVAVMTSPTCPTGTDRVAE-VARGRSGVDVWVNVQGDEPLLDPEALK-VLAGLFQDPA 122
Query: 169 AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQ 228
T V L+ + P+ VK V+ +G A+YFSR +P+ + H+G+
Sbjct: 123 VRMGTLVRPLEAAEVPSPHVVKAVLALNGDALYFSRAALPFIREAGHEGSVRRWAHIGLY 182
Query: 229 SYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESF 288
Y L L PTPL+ E LEQL+ LE+G +++ +V + VD PEDV ++E
Sbjct: 183 GYRHETLLELATLPPTPLEEAEKLEQLRALEHGLRIRCGQVHGKTVAVDVPEDVARVEEV 242
Query: 289 MRERNL 294
+R R L
Sbjct: 243 LRTRGL 248
>gi|191171806|ref|ZP_03033352.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase KpsU [Escherichia
coli F11]
gi|386282066|ref|ZP_10059720.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia sp.
4_1_40B]
gi|422376843|ref|ZP_16457092.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 60-1]
gi|432418465|ref|ZP_19661061.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE44]
gi|432555012|ref|ZP_19791731.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE47]
gi|432681677|ref|ZP_19917038.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE143]
gi|432714789|ref|ZP_19949817.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE8]
gi|190907841|gb|EDV67434.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase KpsU [Escherichia
coli F11]
gi|324011890|gb|EGB81109.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 60-1]
gi|386120753|gb|EIG69376.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia sp.
4_1_40B]
gi|430937743|gb|ELC57997.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE44]
gi|431082363|gb|ELD88677.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE47]
gi|431218461|gb|ELF15933.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE143]
gi|431253647|gb|ELF47125.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE8]
Length = 246
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 89/242 (36%), Positives = 143/242 (59%), Gaps = 5/242 (2%)
Query: 48 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQ 107
S+ V +IPAR+ SSR GKPL++I+GKPMIQ +ER+ + + VATDD ++ + Q
Sbjct: 2 SKAVIVIPARYGSSRLPGKPLLDIVGKPMIQHVYERALQVAGVAEVWVATDDPRVEKAVQ 61
Query: 108 QFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
FG IMT +GT+R E + K+E DI +N+QGDEP+I P ++ +++ ++ P
Sbjct: 62 AFGGKAIMTRNDHESGTDRLVEVMHKVEA--DIYINLQGDEPMIRPRDVETLLQGMRDDP 119
Query: 168 DAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+T ++ E+A +P+ VK VV+ A+YFSR IPY ++ + + YL H+GI
Sbjct: 120 ALPVATLCHAISAEEATEPSTVKVVVNTRQDALYFSRSPIPYPRNAE---KARYLKHVGI 176
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
+Y + L+ Y L + + E LEQL+++ G ++ +V GVD P +EK+ +
Sbjct: 177 YAYRRDVLQNYSQLPESMPEQAESLEQLRLMSAGINIRTFEVAATGPGVDTPACLEKVRA 236
Query: 288 FM 289
M
Sbjct: 237 LM 238
>gi|159046115|ref|YP_001534909.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Dinoroseobacter
shibae DFL 12]
gi|157913875|gb|ABV95308.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Dinoroseobacter
shibae DFL 12]
Length = 266
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 97/258 (37%), Positives = 145/258 (56%), Gaps = 18/258 (6%)
Query: 50 VVGIIPARFASSRFEGKPLVNILG-----KPMIQRTWERSKLATTLDHLVVATDDEKIAE 104
V+ +IPAR+ S R+ GKPLV + G + +I+R+W+ + A +D +VVATDD++I
Sbjct: 3 VLVVIPARYPSVRYPGKPLVELRGATGVARSLIRRSWDAAMAAEGVDRVVVATDDDRIRS 62
Query: 105 CCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQ 164
+ FGA+ +MTS++CRNGTERC EAL L +IVVN+QGD PL + +V L+
Sbjct: 63 HAEGFGAEAVMTSDTCRNGTERCAEALTALGISPEIVVNLQGDAPLTPAWFVSDLVAGLR 122
Query: 165 AAPDAVFSTAVTS---------LKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK-SGK 214
AAPDA +T V L+ A V D +A+YFS+ +IP+ S
Sbjct: 123 AAPDAALATPVLRCDGAALAGFLEDRRAGRVGGTTAVFDRDNHALYFSKEVIPFTSDSYA 182
Query: 215 VNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAH 274
+ P H+G+ +Y + L Y PL+ E LEQL+ LENG K+ ++V+
Sbjct: 183 PDAPTPVFHHVGLYAYRPDALVAYGTWPVGPLETLEGLEQLRFLENGRKVLCVEVEGRGR 242
Query: 275 G---VDAPEDVEKIESFM 289
++ PEDV +IE+ +
Sbjct: 243 AFWELNNPEDVPRIEAML 260
>gi|442611087|ref|ZP_21025793.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudoalteromonas
luteoviolacea B = ATCC 29581]
gi|441747015|emb|CCQ11855.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudoalteromonas
luteoviolacea B = ATCC 29581]
Length = 251
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 102/249 (40%), Positives = 151/249 (60%), Gaps = 9/249 (3%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V +IPARFAS+R GKPL NI+GKPM+Q +E +K + + +ATD E++ E + F
Sbjct: 4 VVVIPARFASTRLPGKPLANIVGKPMVQHVYEAAK-QSGAKAVYIATDHERVYEAAKTFT 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
V+MT +S ++GTER E ++ L D I+VN+QGDEPL+ E + V K L +
Sbjct: 63 DHVLMTRDSHQSGTERLAEVVELLSLHDDTIIVNVQGDEPLLASENVTQVAKLLHESDAP 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ------FPYLL 223
+ + +V L E+ F+PN VK V D A+YFSR IP+ + +N +
Sbjct: 123 MATLSVDILDVEEVFNPNAVKVVADAKRNALYFSRASIPFQRDSMLNLDKAKINLSAFSR 182
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAH-GVDAPEDV 282
H+GI +Y + F+K Y L +PL+L E LEQL+VL +GY +KV K H GVD PED+
Sbjct: 183 HVGIYAYRAGFIKQYLALPVSPLELLESLEQLRVLYHGYAIKVAKAQFPVHAGVDTPEDL 242
Query: 283 EKIESFMRE 291
E++ +F+++
Sbjct: 243 ERVIAFLQQ 251
>gi|319902266|ref|YP_004161994.1| 3-deoxy-D-manno-octulosonatecytidylyltransferase [Bacteroides
helcogenes P 36-108]
gi|319417297|gb|ADV44408.1| 3-deoxy-D-manno-octulosonatecytidylyltransferase [Bacteroides
helcogenes P 36-108]
Length = 252
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/255 (38%), Positives = 151/255 (59%), Gaps = 16/255 (6%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +GIIPAR+AS+RF KPL + GK +IQR +E +++ LD VATDDE+I +
Sbjct: 2 KFLGIIPARYASTRFPAKPLAVLGGKTVIQRVYE--QVSGILDDAYVATDDERIEAAVKA 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG V+MTS + ++GT+RC EA K+ ++D+V+NIQGDEP I ++A+ A D
Sbjct: 60 FGGKVVMTSINHKSGTDRCYEAYLKIGGRFDVVLNIQGDEPFIRF----SQLQAIMACFD 115
Query: 169 AVFSTAVTSLKPEDA---FD----PNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP- 220
+ T +KP +A FD N K V++ + A+YFSR +IPY ++ +
Sbjct: 116 DPATDIATLVKPFEAGADFDVLENMNSPKVVLNKNMNALYFSRSIIPYQRNAEKRDWLKN 175
Query: 221 --YLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDA 278
Y H+G+ +Y L+ L + L+L E LEQL+ LENGY +K + E G+D
Sbjct: 176 HVYYKHIGLYAYRVEVLREITSLPQSSLELAESLEQLRWLENGYTIKAGITEVETIGIDT 235
Query: 279 PEDVEKIESFMRERN 293
P+D+E+ E F++ ++
Sbjct: 236 PQDLERAEIFLKSQS 250
>gi|407784795|ref|ZP_11131944.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Celeribacter
baekdonensis B30]
gi|407204497|gb|EKE74478.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Celeribacter
baekdonensis B30]
Length = 266
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/266 (37%), Positives = 154/266 (57%), Gaps = 22/266 (8%)
Query: 50 VVGIIPARFASSRFEGKPLVNILG-----KPMIQRTWERSKLATTLDHLVVATDDEKIAE 104
V+ +IPAR+AS+R+ GKPLV + G K +I+R+W+ + + +D +VVATDD++I
Sbjct: 3 VLIVIPARYASTRYPGKPLVELTGATGEAKSLIRRSWDAAIAVSGVDRVVVATDDDRIRT 62
Query: 105 CCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQ 164
+ FGA+V+MTSE+C NGTERC EAL+ L YDIVVN+QGD PL ++ +V L+
Sbjct: 63 AAEAFGAEVVMTSEACANGTERCAEALENLGGGYDIVVNLQGDAPLTPAWFVEDLVAGLR 122
Query: 165 AAPDAVFSTAVTSL--KPEDAFDPNR-------VKCVVDNHGYAIYFSRGLIPY-NKSGK 214
A P A +T V + + F +R V + +YFS+ +IPY +K+
Sbjct: 123 AHPTAEVATPVLRCDGRALNGFLEDRRAGRVGGTTAVFGSDHKGLYFSKEVIPYTSKTYA 182
Query: 215 VNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAH 274
+ + P H+G+ +Y + L YP PL+ E LEQL+ LE + V+ V+ E+
Sbjct: 183 DDEETPVFHHVGVYAYRPSALAAYPKWPTGPLESLEGLEQLRFLEQ--ERPVLCVEVESR 240
Query: 275 G-----VDAPEDVEKIESFMRERNLS 295
G ++ PEDV ++E+ + E S
Sbjct: 241 GRQFWELNNPEDVPRLEAMLSEMGAS 266
>gi|345298595|ref|YP_004827953.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Enterobacter
asburiae LF7a]
gi|345092532|gb|AEN64168.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Enterobacter
asburiae LF7a]
Length = 248
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/246 (40%), Positives = 146/246 (59%), Gaps = 7/246 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPAR+AS+R GKPLV+I GKPMI +R++ + D ++VATD +A + G
Sbjct: 4 VVIIPARYASTRLPGKPLVDINGKPMIVHVLDRAR-ESGADRVIVATDHPDVARAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D ++VN+QGDEP+I II V + L
Sbjct: 63 GEVCMTRVDHQSGTERLAEVVEKCGFSDDTVIVNVQGDEPMIPAVIIRQVAENLAQRKVG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK----SGKVNPQFPYLLHL 225
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ + K +L HL
Sbjct: 123 MATLAVPIHHAEEAFNPNAVKVVMDAEGYALYFSRATIPWDRDRFAASKEAIGDTFLRHL 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI Y + F++ Y P+PL+ E LEQL+VL G K+ V + + GVD PED+E+
Sbjct: 183 GIYGYRAGFIRRYVTWAPSPLEHIEMLEQLRVLWYGEKIHVAVAQEVPGTGVDTPEDLER 242
Query: 285 IESFMR 290
+ + +R
Sbjct: 243 VRAELR 248
>gi|410614545|ref|ZP_11325588.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Glaciecola
psychrophila 170]
gi|410165869|dbj|GAC39477.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Glaciecola
psychrophila 170]
Length = 251
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 102/247 (41%), Positives = 146/247 (59%), Gaps = 20/247 (8%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR+AS+RF GKPLV I GKPM+Q +ER++ + +++VATDD +IA+ FG
Sbjct: 6 IIPARYASTRFPGKPLVEIQGKPMVQHVYERAQ-ESGASNILVATDDVRIAKVVDDFGGK 64
Query: 113 VIMTSESCRNGTERCNEA--LQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAV 170
MT +GTER E LQ + +++VVN+QGDEP I E I V + L A
Sbjct: 65 YCMTGAHHESGTERLAEVVDLQNM-LSHELVVNVQGDEPFIPAENILQVAENLHNHQQAE 123
Query: 171 FST-AVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP------YLL 223
+T AV E+AF+PN VK V+D GYA+YFSR IPY+++ ++ Y
Sbjct: 124 MATLAVKITDVEEAFNPNTVKVVMDKQGYAMYFSRSTIPYDRARFLDSDSIDEIGDFYFR 183
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAH-----GVDA 278
H+GI +Y + F+K Y + P+ ++ E LEQL+VL +G K+ V EA G+D
Sbjct: 184 HIGIYAYRAGFIKQYVNMSPSGIEQIESLEQLRVLWHGEKIHV----QEARVTPPIGIDT 239
Query: 279 PEDVEKI 285
PED+ ++
Sbjct: 240 PEDLARL 246
>gi|402846696|ref|ZP_10895005.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Porphyromonas
sp. oral taxon 279 str. F0450]
gi|402267388|gb|EJU16783.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Porphyromonas
sp. oral taxon 279 str. F0450]
Length = 244
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 102/247 (41%), Positives = 152/247 (61%), Gaps = 16/247 (6%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
R++ IIPAR+AS+RF GKPLV+I GKPMI R ER+ LA D +VVATDD++I +
Sbjct: 2 RILTIIPARYASTRFPGKPLVDIGGKPMIIRVVERA-LAVCSD-VVVATDDKRIFTTVTE 59
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQ---- 164
G +MTS ++GTERC EA Q L + D+++N+QGDEP I E I ++ A
Sbjct: 60 QGYRAVMTSPDHQSGTERCLEAYQLLAEPADVLINLQGDEPFIADEQIRLLISAFDDPSV 119
Query: 165 --AAPDAVFSTAVTSLKPEDAFDPNRVKCV-VDNHGYAIYFSRGLIPYNKSGKVNP---Q 218
A F + T+ E+ +PN VK V + GYA+YFSR +IPY +S + P +
Sbjct: 120 DLATLAQPFPSTATN---EELANPNAVKLVRSTSTGYALYFSRSVIPYLRSVE-RPWAKE 175
Query: 219 FPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDA 278
+L H+G+ ++ ++ L L +PL+ E LEQL+ LE G +++V+ D E+ G+D
Sbjct: 176 HTFLKHIGLYAFRTHVLPTIQSLPASPLEESERLEQLRWLEAGLRIRVMLSDQESIGIDT 235
Query: 279 PEDVEKI 285
PED++++
Sbjct: 236 PEDLKRL 242
>gi|432408023|ref|ZP_19650727.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE28]
gi|430928024|gb|ELC48575.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE28]
Length = 246
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 89/242 (36%), Positives = 143/242 (59%), Gaps = 5/242 (2%)
Query: 48 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQ 107
S+ V +IPAR+ SSR GKPL++I+GKPMIQ +ER+ + + VATDD ++ + Q
Sbjct: 2 SKAVIVIPARYGSSRLPGKPLLDIVGKPMIQHVYERALQVAGVAEVWVATDDPRVEKAVQ 61
Query: 108 QFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
FG IMT +GT+R E + K+E DI +N+QGDEP+I P ++ +++ ++ P
Sbjct: 62 AFGGKAIMTRNDHESGTDRLVEVMHKVEA--DIYINLQGDEPMIRPRDVETLLQGMRDDP 119
Query: 168 DAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+T ++ E+A +P+ VK VV+ A+YFSR IPY ++ + + YL H+GI
Sbjct: 120 ALPVATLCHAITAEEATEPSTVKVVVNTRQDALYFSRSPIPYPRNAE---KARYLKHVGI 176
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
+Y + L+ Y L + + E LEQL+++ G ++ +V GVD P +EK+ +
Sbjct: 177 YAYRRDVLQNYSQLPESMPEQAESLEQLRLMNAGINIRTFEVAATGPGVDTPACLEKVRA 236
Query: 288 FM 289
M
Sbjct: 237 LM 238
>gi|88705101|ref|ZP_01102813.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Congregibacter
litoralis KT71]
gi|88700796|gb|EAQ97903.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Congregibacter
litoralis KT71]
Length = 258
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/247 (39%), Positives = 137/247 (55%), Gaps = 14/247 (5%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+AS+R GKPL +I GK M+Q WER+ + +V+ATDDE+I C FGA
Sbjct: 6 VIPARYASTRLPGKPLSDIAGKSMLQHVWERAG-TSAASEVVIATDDERIEAACADFGAR 64
Query: 113 VIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
+MT +GT+R E +++L + IVVN+QGDEPLI +ID V LQ P A
Sbjct: 65 CLMTRADHASGTDRLAEVVEQLGLTEKHIVVNVQGDEPLIPSAVIDQVAGNLQRNPSASM 124
Query: 172 STAVTSLKPEDAF-DPNRVKCVVDNHGYAIYFSRGLIPYNK----SGKVNPQFPYLLHLG 226
+T + D N VK V D +G A+YFSR IP+ + S P+ + H+G
Sbjct: 125 ATLCEVITDATVLRDTNAVKVVFDENGRALYFSRATIPWPRDHEGSDGEMPEGQWHRHIG 184
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAH----GVDAPEDV 282
I +Y + FLK Y P PL+L E LEQL+ L YK + I V+ G+D P D+
Sbjct: 185 IYAYRAGFLKRYSQWQPAPLELTESLEQLRAL---YKGESIHVEPACAAVPGGIDTPADL 241
Query: 283 EKIESFM 289
+++
Sbjct: 242 DRVRGLF 248
>gi|429095528|ref|ZP_19157634.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Cronobacter
dublinensis 582]
gi|426281868|emb|CCJ83747.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Cronobacter
dublinensis 582]
Length = 245
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 97/244 (39%), Positives = 144/244 (59%), Gaps = 7/244 (2%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR+AS+R GKPLV+I GKPMI ER++ + + ++VATD +A + G +
Sbjct: 3 IIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGAERIIVATDHPDVARAIEAAGGE 61
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MT ++GTER E ++K D ++VN+QGDEP+I P II V + L + +
Sbjct: 62 VCMTRADHQSGTERLAEVVEKCGFADDTVIVNVQGDEPMIPPAIIRQVAENLAGSQAGMA 121
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP----YLLHLGI 227
+ AV +AF+PN VK V+D GYA+YFSR IP+++ + +L H+GI
Sbjct: 122 TLAVPIHDAHEAFNPNAVKVVMDAQGYALYFSRATIPWDRDRFAQSRDTIGDSFLRHIGI 181
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVD-HEAHGVDAPEDVEKIE 286
Y + F++ Y +PL+ E LEQL+VL +G K+ V + GVD PED+E++
Sbjct: 182 YGYRAGFIRRYVTWPASPLEQIEMLEQLRVLWHGEKIHVAVAEVVPGTGVDTPEDLERVR 241
Query: 287 SFMR 290
+ MR
Sbjct: 242 AEMR 245
>gi|426402768|ref|YP_007021739.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bdellovibrio
bacteriovorus str. Tiberius]
gi|425859436|gb|AFY00472.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bdellovibrio
bacteriovorus str. Tiberius]
Length = 247
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 92/248 (37%), Positives = 143/248 (57%), Gaps = 4/248 (1%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
++VG+IPARF S+RF GKPLVN+ G+P+IQ T E ++ + L ++VATD E I +
Sbjct: 2 KIVGVIPARFGSTRFPGKPLVNLKGRPLIQWTVEGARKSKLLSEVIVATDHEGIKAAAEA 61
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
G V+MT G++R N A++ + D+VVNIQGDEPL+ E+ID + + P
Sbjct: 62 VGVKVVMTDSDLPTGSDRINAAIKDI--ACDVVVNIQGDEPLVTGELIDRLAQVFVDDPK 119
Query: 169 AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK--SGKVNPQFPYLLHLG 226
+T + E+ N VK V + A+YFSR +PY++ + + L H+G
Sbjct: 120 IDMATLAHPISAEELQSMNSVKVVTNCRDEALYFSRYPMPYSRLSAQEAGTMDGCLKHIG 179
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIE 286
+ +Y +FLK + P ++ E LEQL+ L G K+KVI+V + GVD PED+ ++E
Sbjct: 180 MYAYSRSFLKQFCEAPPALIEKAESLEQLRALYLGAKIKVIRVKEASVGVDTPEDLARLE 239
Query: 287 SFMRERNL 294
+ + +
Sbjct: 240 KLLSSQGM 247
>gi|313673398|ref|YP_004051509.1| 3-deoxy-d-manno-octulosonatecytidylyltransferase [Calditerrivibrio
nitroreducens DSM 19672]
gi|312940154|gb|ADR19346.1| 3-deoxy-D-manno-octulosonatecytidylyltransferase [Calditerrivibrio
nitroreducens DSM 19672]
Length = 243
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 95/240 (39%), Positives = 146/240 (60%), Gaps = 7/240 (2%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQF-GA 111
+IPAR+AS+R EGKPL I G PMI + K + + ++V TDD +I + C++ G
Sbjct: 6 VIPARYASTRLEGKPLKEIAGIPMIVWVAQNCK-KSKANRVIVVTDDTRILDECKKIDGI 64
Query: 112 DVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
+V M+ + +GT+R + + L+ DI++N+QGDEP I+ ++ID ++ L+++ DAV
Sbjct: 65 EVTMSDPNLPSGTDRVAKVARFLDD--DIIINVQGDEPFIDYKVIDMLIDDLKSS-DAVM 121
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYD 231
+TA + A +PN VK V D GYA+YFSR IPY + + Q + H+GI Y
Sbjct: 122 NTACVKIDETTAQNPNVVKVVFDKTGYALYFSRSPIPYYRDK--DEQKFFYKHIGIYGYR 179
Query: 232 SNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFMRE 291
+FLK++ L P+ + E LEQL+ L+NGYK+KVI+ D+ VD ED+ K + E
Sbjct: 180 RSFLKVFNSLEPSVHESIEKLEQLRALDNGYKIKVIETDYNGISVDTEEDLIKANKYAME 239
>gi|359435566|ref|ZP_09225761.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudoalteromonas
sp. BSi20652]
gi|357917791|dbj|GAA62010.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudoalteromonas
sp. BSi20652]
Length = 253
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 104/253 (41%), Positives = 157/253 (62%), Gaps = 12/253 (4%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V +IPARFAS+R GKPL +I GKPM+Q +E++ L+ +V+ATD +K+ + F
Sbjct: 4 VVVIPARFASTRLPGKPLADICGKPMVQHVYEKACLSGA-SKVVIATDHQKVFDAVSLFT 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKAL--QAAP 167
DV+MT E ++GTER E + L+ + IVVN+QGDEPL+ PE + V L AP
Sbjct: 63 RDVVMTREDHKSGTERLAEVVDLLDLDSNTIVVNVQGDEPLLAPENVSQVAALLSDSTAP 122
Query: 168 DAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ-----FPYL 222
A S A+ + ++ F+PN VK V D + A+YFSR IP+++S +N P+
Sbjct: 123 MATLSVAIE--ERDEVFNPNAVKVVSDINKNALYFSRASIPFDRSTMMNDSSALNLAPFQ 180
Query: 223 LHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAH-GVDAPED 281
H+GI +Y + F+K Y L +PL+L E LEQL+VL +GYK+K+ + H GVD P+D
Sbjct: 181 RHVGIYAYRAGFIKQYIELSVSPLELLESLEQLRVLYHGYKIKIEQAQIAPHAGVDTPDD 240
Query: 282 VEKIESFMRERNL 294
+ K+ + ++ +N+
Sbjct: 241 LAKVIAHIKSKNV 253
>gi|308186264|ref|YP_003930395.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pantoea vagans
C9-1]
gi|308056774|gb|ADO08946.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pantoea vagans
C9-1]
Length = 249
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 94/245 (38%), Positives = 147/245 (60%), Gaps = 7/245 (2%)
Query: 52 GIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGA 111
IIPAR+AS+R GKPL++I GKPM+ ER++ + ++VATD +A+ + G
Sbjct: 5 AIIPARYASTRLPGKPLLDIHGKPMVVHVMERAR-ESGASRVIVATDHPDVAQAVEAAGG 63
Query: 112 DVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAV 170
+V MT ++GTER E ++K + D I+VN+QGDEP+I EI+ V L + +
Sbjct: 64 EVCMTRADHQSGTERLAEVIEKYQFADDEIIVNVQGDEPMIPAEIVRQVATNLAGSAAGM 123
Query: 171 FSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK----SGKVNPQFPYLLHLG 226
+ AV E+AF+PN VK V+D +GYA+YFSR IP+++ + + L H+G
Sbjct: 124 ATLAVPITDVEEAFNPNAVKVVMDANGYALYFSRATIPWDRERYAASREQIGDTLLRHIG 183
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKI 285
I +Y + F++ Y P PL+ E LEQL+VL G K+ V + + GVD P+D++++
Sbjct: 184 IYAYRAGFIRRYVAWAPCPLEQIELLEQLRVLWYGEKIHVAVAKTIPSVGVDTPDDLQRV 243
Query: 286 ESFMR 290
+ M+
Sbjct: 244 RAAMQ 248
>gi|189347517|ref|YP_001944046.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlorobium
limicola DSM 245]
gi|226724665|sp|B3EG58.1|KDSB_CHLL2 RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|189341664|gb|ACD91067.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Chlorobium
limicola DSM 245]
Length = 247
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 95/243 (39%), Positives = 144/243 (59%), Gaps = 7/243 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V +IPAR SSR K L ++ G+P+I RTW ++ L+ +VVATD +IA + +G
Sbjct: 4 VILIPARLDSSRLPKKMLADLDGEPLIVRTWRQALLSNHAVRVVVATDSPEIAGALEAYG 63
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAV 170
A+V+MTS R GTER EA + ++ D+ +N+QGDEPLI+P ID ++ A
Sbjct: 64 AEVMMTSPHARCGTERIAEAARSIDA--DVFLNLQGDEPLIDPRNIDLCLEPFLADNPPD 121
Query: 171 FSTAVTSLKPED---AFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
ST V L PED DPN VK V+D +G A+YFSR +P+ + QF H+G+
Sbjct: 122 CSTLVYPLLPEDFQQIDDPNVVKVVLDRNGNALYFSRSPVPFQREVYAATQF--YRHIGL 179
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
++ + L+ Y L P+ L+ E LEQL++LENG+ ++ + + GV+ PED++ +
Sbjct: 180 YAFSAEVLQHYASLPPSMLEKAESLEQLRLLENGFSIRCVTTTVDHPGVNTPEDLDLVRR 239
Query: 288 FMR 290
+R
Sbjct: 240 MLR 242
>gi|294636898|ref|ZP_06715226.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Edwardsiella
tarda ATCC 23685]
gi|451967163|ref|ZP_21920409.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Edwardsiella tarda
NBRC 105688]
gi|291089889|gb|EFE22450.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Edwardsiella
tarda ATCC 23685]
gi|451314095|dbj|GAC65771.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Edwardsiella tarda
NBRC 105688]
Length = 250
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/245 (38%), Positives = 146/245 (59%), Gaps = 7/245 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
+ IIP+R+AS+R GKPL +I GKPM+ R E+++ A+ ++VATD ++ + Q G
Sbjct: 4 IAIIPSRYASTRLPGKPLADIAGKPMVVRVMEQAR-ASGAHRVIVATDHPEVQQAVLQAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT +GTER E +++ DI+VN+QGDEPLI P II V + L +
Sbjct: 63 GEVCMTRADHHSGTERLAEVVERCGFADDDIIVNVQGDEPLIPPAIIRQVAETLARSEAG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF----PYLLHL 225
+ + AV + +AF+PN VK V D+ GYA+YFSR IP+++ Q +L H+
Sbjct: 123 MATLAVPIHEAAEAFNPNAVKVVRDHQGYALYFSRAPIPWDRERFAASQAQIGESFLRHI 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI +Y + F++ Y P+ L+ E LEQL+VL +G K+ V + + GVD PED+ +
Sbjct: 183 GIYAYRAGFIRRYVTWAPSELEQIEMLEQLRVLWHGEKIHVDVALQVPGPGVDTPEDLAR 242
Query: 285 IESFM 289
+ + +
Sbjct: 243 VRAIV 247
>gi|337279837|ref|YP_004619309.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Ramlibacter
tataouinensis TTB310]
gi|334730914|gb|AEG93290.1| Candidate 3-deoxy-manno-octulosonate cytidylyltransferase
[Ramlibacter tataouinensis TTB310]
Length = 254
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/245 (39%), Positives = 139/245 (56%), Gaps = 9/245 (3%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR AS+R KPL +I G+PM+ R ER++ + +VVA D IA+ C+ G +
Sbjct: 6 LIPARLASTRLPDKPLADIAGRPMVVRVAERAQRSGA-SRVVVAADSPAIAQACRAHGIE 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
+MT +G++R EA Q+L D VVN+QGDEPLI+P +ID V L P+A
Sbjct: 65 AVMTRPDHPSGSDRLAEACQQLGLAEDSTVVNVQGDEPLIDPALIDAVAALLAQRPEAAM 124
Query: 172 STAVTSLKPEDAF-DPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVN-----PQFPYLLHL 225
STA ++ F +PN VK V D G A+YFSR I + + G PQ L H+
Sbjct: 125 STAAHAIDAVADFGNPNVVKVVTDARGLALYFSRAPIAWWRDGFAAGIEQLPQPRPLRHI 184
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHE-AHGVDAPEDVEK 284
GI Y + FL+ +P L P++ E LEQL+ L +G+++ V H GVD PED+++
Sbjct: 185 GIYGYRAGFLQAFPRLPQAPIEQLEALEQLRALWHGHRIAVHLSAHAPGPGVDTPEDLQR 244
Query: 285 IESFM 289
+ +
Sbjct: 245 VRALF 249
>gi|398950767|ref|ZP_10673796.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas sp.
GM33]
gi|398157510|gb|EJM45896.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas sp.
GM33]
Length = 254
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/246 (41%), Positives = 145/246 (58%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IP+R+AS+R GKPL+ I GKPMIQ WE++ ++ +VVATDD +I E C FGA+
Sbjct: 8 VIPSRYASTRLPGKPLLLIAGKPMIQHVWEQAS-KSSAGRVVVATDDARIVEACNGFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V++T E +GT+R E KL D IVVN+QGDEPLI P +ID V L A +A
Sbjct: 67 VVLTREDHNSGTDRLAEVAMKLGLAPDAIVVNVQGDEPLIPPSVIDQVAANLAAHAEARM 126
Query: 172 STAVTSLKPEDA-FDPNRVKCVVDNHGYAIYFSRGLIPYNKSG-KVNPQ-----FPYLLH 224
+T ++ D F+PN VK V D +G A+ FSR +P+ + VNP+ PY H
Sbjct: 127 ATLAEPIEDADTLFNPNVVKVVSDLNGLALTFSRSTLPWARDAFAVNPEQLPEGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDAPEDVE 283
+GI +Y + FL+ + P L+ E LEQL+ L +G ++ V + GVD ED+E
Sbjct: 187 IGIYAYRAGFLQDFVNWGPCWLENTECLEQLRALWHGVRIHVADALIAPPAGVDTVEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|283784744|ref|YP_003364609.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Citrobacter
rodentium ICC168]
gi|282948198|emb|CBG87765.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Citrobacter
rodentium ICC168]
Length = 248
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/248 (40%), Positives = 146/248 (58%), Gaps = 11/248 (4%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPAR+AS+R GKPL++I GKPMI ER++ + + ++VATD E++A + G
Sbjct: 4 VVIIPARYASTRLPGKPLLDINGKPMIVHVLERAR-ESGAERIIVATDHEEVARAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D ++VN+QGDEP+I II V + L
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCGFSDDTVIVNVQGDEPMIPAVIIRQVAENLAQRQVG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSG------KVNPQFPYLL 223
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ V F L
Sbjct: 123 MATLAVPIHGAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAKSLETVGDTF--LR 180
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDV 282
HLGI Y + F++ Y P+PL+ E LEQL+VL G K+ V + + GVD ED+
Sbjct: 181 HLGIYGYRAGFIRRYVNWQPSPLENIEMLEQLRVLWYGEKIHVAVAKEVPGTGVDTAEDL 240
Query: 283 EKIESFMR 290
E++ + MR
Sbjct: 241 ERVRAEMR 248
>gi|402495729|ref|ZP_10842451.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Aquimarina
agarilytica ZC1]
Length = 239
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/232 (37%), Positives = 135/232 (58%), Gaps = 4/232 (1%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR SSR K L+++ GK +IQR +E+ AT +D + +A DD+K+ C F +
Sbjct: 6 VIPARLKSSRLPNKLLLDLGGKSIIQRVYEQCIKATNIDAVYIAVDDQKLVTHCSLFTNN 65
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFS 172
VI+TS+ ++GT+R EA+ + D ++N+QGDEP I+P++I+G+ AL
Sbjct: 66 VILTSKDHQSGTDRIAEAVTNIN--CDAIINVQGDEPFIDPKLIEGIADALNNTEMVSAK 123
Query: 173 TAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDS 232
+ +L + DPN VK + D + AIYFSR +IP+N+ Y HLGI Y
Sbjct: 124 CKLDNL--HEIEDPNNVKVITDKNSKAIYFSRSVIPFNRDQIDLQNISYYKHLGIYGYSK 181
Query: 233 NFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEK 284
FL + + PT L+ E LEQL+V+ENG+ + ++ +H G+D D +K
Sbjct: 182 KFLIEFSNMKPTLLESTEKLEQLRVIENGHSIHMVHSEHNGIGIDTLHDYQK 233
>gi|429335478|ref|ZP_19216105.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas putida
CSV86]
gi|428759824|gb|EKX82111.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas putida
CSV86]
Length = 254
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/246 (39%), Positives = 141/246 (57%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR S+R KPL+ I GKPMIQ WE+++ ++ +V+ATDD I E C+ FGA+
Sbjct: 8 VIPARLRSTRLPNKPLLAIAGKPMIQHVWEQAR-KSSAARVVIATDDASIVEACKAFGAE 66
Query: 113 VIMTSESCRNGTERCNEA-LQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V++T +GT+R E IVVN+QGDEPLI P IID V L A P+A
Sbjct: 67 VLLTRADHESGTDRLAEVAAALDLPADAIVVNVQGDEPLIPPSIIDQVAANLAAHPEAGI 126
Query: 172 STAVTSLKPEDA-FDPNRVKCVVDNHGYAIYFSRGLIPYNKSG------KVNPQFPYLLH 224
ST L+ +A F+PN VK V D +G A+ FSR +P+ + ++ PY H
Sbjct: 127 STLGEPLESVEALFNPNVVKVVADCNGLALTFSRAPLPWARDALARDRQQLPAGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDAPEDVE 283
+G+ +Y + FL+ + G P L+ E LEQL+ L +G ++ V ++ GVD ED+E
Sbjct: 187 IGMYAYRAGFLQDFVGWGPCWLEQTEALEQLRALWHGVRIHVADALEAPPVGVDTAEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|381405092|ref|ZP_09929776.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pantoea sp. Sc1]
gi|380738291|gb|EIB99354.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pantoea sp. Sc1]
Length = 249
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/245 (38%), Positives = 145/245 (59%), Gaps = 7/245 (2%)
Query: 52 GIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGA 111
IIPAR+AS+R GKPL++I GKPM+ ER++ + ++VATD +A+ + G
Sbjct: 5 AIIPARYASTRLPGKPLLDIHGKPMVVHVMERAR-ESGASRVIVATDHPDVAQAVEAAGG 63
Query: 112 DVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAV 170
+V MT ++GTER E ++K + D I+VN+QGDEP+I EI+ V L + +
Sbjct: 64 EVCMTRADHQSGTERLAEVIEKYQFADDEIIVNVQGDEPMIPAEIVRQVANNLAGSAAGM 123
Query: 171 FSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK----SGKVNPQFPYLLHLG 226
+ AV E+AF+PN VK V+D GYA+YFSR IP+++ + + L H+G
Sbjct: 124 ATLAVPITDAEEAFNPNAVKVVMDAQGYALYFSRATIPWDRERYAASRDQIGDTLLRHIG 183
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKI 285
I +Y + F++ Y P PL+ E LEQL+VL G K+ V + + GVD P+D++++
Sbjct: 184 IYAYRAGFIRRYVAWAPCPLEQIELLEQLRVLWYGEKIHVAVAQTIPSVGVDTPDDLQRV 243
Query: 286 ESFMR 290
M+
Sbjct: 244 REAMQ 248
>gi|344940773|ref|ZP_08780061.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Methylobacter
tundripaludum SV96]
gi|344261965|gb|EGW22236.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Methylobacter
tundripaludum SV96]
Length = 256
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 98/247 (39%), Positives = 142/247 (57%), Gaps = 10/247 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ S+R GKPL+ I GKPMI ER++ A D ++VATDDE+I + G
Sbjct: 8 VIPARYGSTRLPGKPLLKIAGKPMIAHVCERAQEADA-DEIIVATDDERIFQAVTDLGIK 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
+MT ++GTER E + D I+VN+QGDEPLI P I V AL A
Sbjct: 67 AVMTRADHQSGTERIAEVARLCGWAGDEIIVNLQGDEPLIPPAYIRDVAAALAGQKQAGI 126
Query: 172 STAVTSLK-PEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK------SGKVNPQFPYLLH 224
+T + PE+ F+PN VK V+++ GYA+YFSR IP+ + G + + P+L H
Sbjct: 127 ATLAAKITDPEEIFNPNAVKVVLNHAGYALYFSRAPIPWERDAFTRSGGLPSGKLPHLRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHE-AHGVDAPEDVE 283
+G+ +Y +FL Y + L+ E LEQL++L +G ++V VD A GVD ED+
Sbjct: 187 IGMYAYTVDFLNRYCLWDASTLESVESLEQLRILWHGEAIRVEIVDQTPAAGVDTQEDLL 246
Query: 284 KIESFMR 290
++E +R
Sbjct: 247 RVEQVLR 253
>gi|387824217|ref|YP_005823688.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Francisella cf.
novicida 3523]
gi|328675816|gb|AEB28491.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Francisella cf.
novicida 3523]
Length = 250
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/246 (40%), Positives = 139/246 (56%), Gaps = 13/246 (5%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR S+R K L +I G+PMIQR +E+ + D +++ATD ++I + FGA
Sbjct: 7 VIPARLKSTRLPNKMLADIAGQPMIQRVYEQVA-KSKFDSIIIATDSQQIKNVAESFGAK 65
Query: 113 VIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V++T +GT+R EA+ KL DI+VN+QGDEPLI E I+ + L P+AV
Sbjct: 66 VVLTKTDHESGTDRIAEAVTKLGFADEDIIVNVQGDEPLIPVENIEQAAQLLIDKPEAVV 125
Query: 172 STAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF---PYLLHLGI 227
ST + ED ++PN VK V D YA+YFSR IP+ + Q + H+GI
Sbjct: 126 STLCEKITDIEDIYNPNNVKVVFDKDNYALYFSRAPIPFERGFSDKQQVNISEFFRHIGI 185
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAH----GVDAPEDVE 283
+Y FLK Y L +P++ E LEQL+VL NGYK I VD A G+D +D+E
Sbjct: 186 YTYRVAFLKYYAELTVSPIEKYEALEQLRVLYNGYK---IAVDQAAKPTPAGIDTLQDLE 242
Query: 284 KIESFM 289
K+
Sbjct: 243 KVRRLF 248
>gi|291616914|ref|YP_003519656.1| KdsB [Pantoea ananatis LMG 20103]
gi|378767878|ref|YP_005196348.1| 3-deoxy-manno-octulosonatecytidylyltransferase [Pantoea ananatis
LMG 5342]
gi|386015278|ref|YP_005933559.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pantoea ananatis
AJ13355]
gi|386079980|ref|YP_005993505.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pantoea ananatis
PA13]
gi|291151944|gb|ADD76528.1| KdsB [Pantoea ananatis LMG 20103]
gi|327393341|dbj|BAK10763.1| 3-deoxy-manno-octulosonate cytidylyltransferase KdsB [Pantoea
ananatis AJ13355]
gi|354989161|gb|AER33285.1| 3-deoxy-manno-octulosonate cytidylyltransferase KdsB [Pantoea
ananatis PA13]
gi|365187361|emb|CCF10311.1| 3-deoxy-manno-octulosonatecytidylyltransferase [Pantoea ananatis
LMG 5342]
Length = 249
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/246 (39%), Positives = 142/246 (57%), Gaps = 7/246 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
+ IIPAR+AS+R GKPLV+I GKPM+ ER++ + ++VATD +A + G
Sbjct: 4 IAIIPARYASTRLPGKPLVDIHGKPMVVHVMERAR-ESGASRVIVATDHPDVASAVEASG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT +GTER E ++K + D I+VN+QGDEP+I EI+ V L +
Sbjct: 63 GEVCMTRADHHSGTERLAEVIEKYQFADDQIIVNVQGDEPMIPAEIVHQVANNLAQSEAG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ----FPYLLHL 225
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ + L H+
Sbjct: 123 MATLAVPITDAEEAFNPNAVKVVMDAKGYALYFSRATIPWDRERYAESRDRIGDTLLRHI 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI +Y + F++ Y P PL+ E LEQL+VL G K+ V + GVD PED+ +
Sbjct: 183 GIYAYRAGFIRRYIDWAPCPLEQIELLEQLRVLWYGEKIHVAVAKTVPGVGVDTPEDLIR 242
Query: 285 IESFMR 290
+ + MR
Sbjct: 243 VRAAMR 248
>gi|417309469|ref|ZP_12096302.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
PCN033]
gi|338768906|gb|EGP23693.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
PCN033]
Length = 246
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/242 (36%), Positives = 144/242 (59%), Gaps = 5/242 (2%)
Query: 48 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQ 107
S+ V +IPAR+ SSR GKPL++I+GKPMIQ +ER+ + + VATDD+++ + Q
Sbjct: 2 SKAVIVIPARYGSSRLPGKPLLDIVGKPMIQHVYERALQVAGVAEVWVATDDQRVEKAVQ 61
Query: 108 QFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
FG IMT +GT+R E + K+E DI +N+QGDEP+I P ++ +++ ++ P
Sbjct: 62 AFGGKAIMTRNDHESGTDRLVEVMYKVEA--DIYINLQGDEPMIRPRDVETLLQGMRDDP 119
Query: 168 DAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+T ++ E+A +P+ VK VV+ A+YFSR IPY ++ + + YL H+GI
Sbjct: 120 ALPVATLCHAISAEEATEPSTVKVVVNTRQDALYFSRSPIPYPRNAE---KARYLKHVGI 176
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
+Y + L+ Y L + + E LEQL+++ G ++ +V GVD P +EK+ +
Sbjct: 177 YAYRRDVLQNYSQLPESMPEQAELLEQLRLMSAGINIRTFEVAATGPGVDTPACLEKVRA 236
Query: 288 FM 289
M
Sbjct: 237 LM 238
>gi|346994862|ref|ZP_08862934.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Ruegeria sp. TW15]
Length = 266
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/261 (38%), Positives = 145/261 (55%), Gaps = 22/261 (8%)
Query: 54 IPARFASSRFEGKPLVNILG-----KPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
IPAR+AS+R+ GKPLV + G +I+R+W + +D +VVATDD++I E +
Sbjct: 7 IPARYASTRYPGKPLVPLTGVNGTAMTLIERSWRAAISVAGVDRVVVATDDDRIREVSEG 66
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FGA+VIMTS++CRNGTERC EA L Y+IVVN+QGD PL ++ ++ L+ AP+
Sbjct: 67 FGAEVIMTSDTCRNGTERCAEAHTALGSGYEIVVNLQGDAPLTPHWFVEDLISGLRDAPE 126
Query: 169 AVFST--------AVTSLKPEDAFDP-NRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ- 218
A +T A+ L + D V N A+YFS+ +IP+ N
Sbjct: 127 AGVATPVLRCDGDALNGLLNDRKHDHVGGTTAVFGNDHSALYFSKEVIPFTSETYANDDP 186
Query: 219 FPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHG--- 275
P H+G+ +Y + L YP PL+ E LEQL+ +ENG K+ ++V EA G
Sbjct: 187 TPVFHHVGVYAYRPDALADYPSWPTGPLETMEGLEQLRFMENGRKVLCVEV--EAKGRQF 244
Query: 276 --VDAPEDVEKIESFMRERNL 294
++ P+DV KIE M L
Sbjct: 245 WELNNPQDVAKIEEMMAAMGL 265
>gi|421616806|ref|ZP_16057808.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
stutzeri KOS6]
gi|421617294|ref|ZP_16058288.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
stutzeri KOS6]
gi|409780792|gb|EKN60409.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
stutzeri KOS6]
gi|409781287|gb|EKN60889.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
stutzeri KOS6]
Length = 254
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/246 (39%), Positives = 140/246 (56%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+AS+R GKPL +I GKPMI+ WE++ + +VVATDD +I + C FGA+
Sbjct: 8 VIPARYASTRLPGKPLQDIAGKPMIRHVWEQAG-KSAAQRVVVATDDPRIVDACSAFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V++T +GT+R E ++L D IVVN+QGDEPLI P +ID V L A P+A
Sbjct: 67 VVLTRPEHNSGTDRLAEVAERLGLAADAIVVNVQGDEPLIPPAVIDQVAANLAAHPEASI 126
Query: 172 STAVTSLKPEDA-FDPNRVKCVVDNHGYAIYFSRGLIPYNKS------GKVNPQFPYLLH 224
+T L A F+PN VK + D G A+ FSR +P+ + ++ PY H
Sbjct: 127 ATLAEPLADVQALFNPNVVKVLSDIDGLALTFSRAPLPWARDSFAADRSQLPAGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDAPEDVE 283
+GI +Y + FL + P L+ E LEQL+ L +G ++ V + GVD ED+E
Sbjct: 187 IGIYAYRAGFLADFVSWGPCWLEDTECLEQLRALWHGRRIHVADALQAPPAGVDTAEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|260597316|ref|YP_003209887.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Cronobacter
turicensis z3032]
gi|260216493|emb|CBA29657.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Cronobacter
turicensis z3032]
Length = 248
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/246 (39%), Positives = 145/246 (58%), Gaps = 7/246 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPAR+AS+R GKPLV+I GKPMI ER++ + ++VATD +A + G
Sbjct: 4 VVIIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGAARIIVATDHPDVARAIEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D ++VN+QGDEP+I P II V + L +
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCGFDDDTVIVNVQGDEPMIPPAIIRQVAENLAGSQAG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP----YLLHL 225
+ + AV ++AF+PN VK V+D GYA+YFSR IP+++ + +L H+
Sbjct: 123 MATLAVPVHDAQEAFNPNAVKVVMDAQGYALYFSRATIPWDRDRFAQSRDTIGDSFLRHI 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI Y + F++ Y +PL+ E LEQL+VL +G K+ V + GVD P+D+E+
Sbjct: 183 GIYGYRAGFIRRYVTWPASPLEQIEMLEQLRVLWHGEKIHVAVAAVVPGTGVDTPDDLER 242
Query: 285 IESFMR 290
+ + MR
Sbjct: 243 VRAEMR 248
>gi|187931504|ref|YP_001891488.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Francisella
tularensis subsp. mediasiatica FSC147]
gi|226724290|sp|B2SG51.1|KDSB_FRATM RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|187712413|gb|ACD30710.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Francisella
tularensis subsp. mediasiatica FSC147]
Length = 250
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/246 (40%), Positives = 141/246 (57%), Gaps = 13/246 (5%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR S+R K L +I GKPMIQR +E+ + D +++ATD +KI + + F A
Sbjct: 7 VIPARLKSTRLPNKMLADIAGKPMIQRVYEQVT-KSKFDSIIIATDSQKIKDIAESFDAK 65
Query: 113 VIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V++T + ++GT+R EA+ KL DIVVN+QGDEPLI E I+ + L +AV
Sbjct: 66 VVLTRDDHQSGTDRIAEAVTKLGFADEDIVVNVQGDEPLIPIENIERAAQLLIDKSEAVV 125
Query: 172 STAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF---PYLLHLGI 227
ST + ED ++PN VK V D + YA+YFSR IP+ + Q + H+GI
Sbjct: 126 STLCEKITDVEDIYNPNNVKVVFDKNNYALYFSRASIPFERGFSEKEQINISEFFRHIGI 185
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAH----GVDAPEDVE 283
+Y FLK Y L +P++ E LEQL+VL NGYK I ++ A GVD +D+E
Sbjct: 186 YAYRVAFLKHYAELTVSPIEKYEALEQLRVLYNGYK---IAIEQSAKSTLAGVDTLQDLE 242
Query: 284 KIESFM 289
K+
Sbjct: 243 KVRKLF 248
>gi|310817111|ref|YP_003965075.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Ketogulonicigenium
vulgare Y25]
gi|385234692|ref|YP_005796034.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase
[Ketogulonicigenium vulgare WSH-001]
gi|308755846|gb|ADO43775.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Ketogulonicigenium
vulgare Y25]
gi|343463603|gb|AEM42038.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase
[Ketogulonicigenium vulgare WSH-001]
Length = 266
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 104/268 (38%), Positives = 155/268 (57%), Gaps = 26/268 (9%)
Query: 50 VVGIIPARFASSRFEGKPLVNILG-----KPMIQRTWERSKLATTLDHLVVATDDEKIAE 104
V+ +IPARFAS+R+ GKPLV + G K +I+R+W + A+ +D +VVATDD +I
Sbjct: 3 VLVVIPARFASTRYPGKPLVALKGADGTAKTLIERSWLAAMSASGVDRVVVATDDARIKA 62
Query: 105 CCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQ 164
+ FGA+V+MT+ +CRNGTERC EAL L +YDIVVN+QGD PL ++ +V L+
Sbjct: 63 AAEGFGAEVVMTATTCRNGTERCAEALDVLAAQYDIVVNLQGDAPLTPAWFVEELVAQLR 122
Query: 165 AAPDAVFSTAVTSLKPEDA----FDPNR-------VKCVVDNHGYAIYFSRGLIPY-NKS 212
AAP+ F A L+ A F +R V A+YFS+ +IPY K+
Sbjct: 123 AAPE--FDVATPVLRTHGAALNGFLEDRRAGRVGGTTVVFAADKRALYFSKEVIPYRGKT 180
Query: 213 GKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHE 272
+ + P H+G+ +Y L+ Y P+ L+ E LEQL+ L+ G + V+ V+ E
Sbjct: 181 YADDDETPVFHHVGVYAYRPAALQRYIAAAPSALEDLEGLEQLRFLDIG--VPVLCVEVE 238
Query: 273 AHG-----VDAPEDVEKIESFMRERNLS 295
A G ++ PEDV +IE+ + + L+
Sbjct: 239 ARGRAFWELNNPEDVPRIETMLFQMGLN 266
>gi|189500986|ref|YP_001960456.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlorobium
phaeobacteroides BS1]
gi|226724667|sp|B3EMY6.1|KDSB_CHLPB RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|189496427|gb|ACE04975.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Chlorobium
phaeobacteroides BS1]
Length = 248
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/245 (38%), Positives = 147/245 (60%), Gaps = 7/245 (2%)
Query: 50 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQF 109
+V +IPAR S+R + K L +I G+P+I RT + + A D +VVATD +IAE ++
Sbjct: 3 IVIVIPARLDSTRLQRKMLADIEGEPLIVRTCQNAMRAECTDRVVVATDSPEIAEVLRKV 62
Query: 110 GADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V+MTS R G+ER EA + LE D+ +N+QGDEPLI+P ID V
Sbjct: 63 HVEVVMTSRHARCGSERIAEAAESLEG--DLFINLQGDEPLIDPATIDLVAAPYLRGERP 120
Query: 170 VFSTAVTSL-KPEDAF--DPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLG 226
+T V + E A DP+ VK V+D++GYA+YFSR IP + ++ F H+G
Sbjct: 121 DCTTLVFPVPAAETALIDDPHIVKAVIDSNGYALYFSRSPIPCRRGANLSTTF--YRHIG 178
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIE 286
I ++ L+ + GL P+ L+ EE LEQL++LENG++++ ++ ++ GV+ PE++E +
Sbjct: 179 IYAFQREVLQKFAGLEPSMLEKEESLEQLRLLENGFRIQCVETTVDSPGVNTPEELEFVR 238
Query: 287 SFMRE 291
RE
Sbjct: 239 RIFRE 243
>gi|348029465|ref|YP_004872151.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Glaciecola
nitratireducens FR1064]
gi|347946808|gb|AEP30158.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Glaciecola
nitratireducens FR1064]
Length = 251
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/253 (39%), Positives = 140/253 (55%), Gaps = 18/253 (7%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ + +IPAR+ S+RF GKPL I GKPMIQ ER+ + ++VATDDE+IA +
Sbjct: 2 KFIVVIPARYGSTRFPGKPLALIKGKPMIQHVVERA-IEAGAQKVIVATDDERIANVVSE 60
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQ--- 164
FGADV MT +GT R E L L D IVVN+QGDEP I I V + L
Sbjct: 61 FGADVCMTRNDHESGTTRIAEVLATLAYPDDTIVVNVQGDEPFIPAINIQQVAQNLHDNS 120
Query: 165 AAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP---- 220
P A ++ + ED F+PN VK V ++H +A+YFSR +P+++ N
Sbjct: 121 QIPMATLGYPISDI--EDIFNPNVVKVVTNSHKHAMYFSRAAMPFDRDEFSNKSVDNICM 178
Query: 221 ------YLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHE-A 273
YL H+GI Y + F+K Y + T L+ E LEQL+VL +G+ + V H
Sbjct: 179 DDLSSVYLRHIGIYGYRAGFVKQYENMSATQLERTESLEQLRVLWHGHVIHVDVAKHAPP 238
Query: 274 HGVDAPEDVEKIE 286
HGVD PED+++ +
Sbjct: 239 HGVDTPEDLQRFQ 251
>gi|163745053|ref|ZP_02152413.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Oceanibulbus
indolifex HEL-45]
gi|161381871|gb|EDQ06280.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Oceanibulbus
indolifex HEL-45]
Length = 266
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 100/263 (38%), Positives = 145/263 (55%), Gaps = 18/263 (6%)
Query: 50 VVGIIPARFASSRFEGKPLVNILG-----KPMIQRTWERSKLATTLDHLVVATDDEKIAE 104
V+ +IPAR+AS+R+ GKPLV + G + +I+R+W + + +D +VVATDD +I E
Sbjct: 3 VLIVIPARYASTRYPGKPLVALTGASGKKQTLIERSWRAACAVSGVDRVVVATDDARIRE 62
Query: 105 CCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQ 164
+ FGA+V+MTSE+C NGTERC EA L YDIVVN+QGD PL ++G+V+ L+
Sbjct: 63 AAEGFGAEVVMTSEACANGTERCAEAHAALGGGYDIVVNLQGDAPLTPHWFVEGLVQGLK 122
Query: 165 AAPDAVFSTAV---------TSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPY-NKSGK 214
DA +T V + L A V A+YFS+ ++PY K+
Sbjct: 123 DKSDAEIATPVLRCDGATLNSLLGDRKAGRVGGTTAVFGADNQALYFSKEVVPYTGKTYG 182
Query: 215 VNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVD---H 271
P H+G+ +Y L YP PL+ E LEQL+ LENG + +V+
Sbjct: 183 DTDATPVFHHVGVYAYRPEALAEYPSWPVGPLEQLEGLEQLRFLENGRSVLCAEVEAKGR 242
Query: 272 EAHGVDAPEDVEKIESFMRERNL 294
E ++ PEDV K+E+ M + L
Sbjct: 243 EFWELNNPEDVPKLEAMMAKMGL 265
>gi|404400405|ref|ZP_10991989.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
fuscovaginae UPB0736]
Length = 254
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 98/247 (39%), Positives = 146/247 (59%), Gaps = 12/247 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPARF+S+R KPL I GKPMIQ TWE+++ ++ +VVATDD +I CQ FGA+
Sbjct: 8 VIPARFSSTRLPAKPLQLIAGKPMIQHTWEQAR-KSSAQRVVVATDDPRIVAACQAFGAE 66
Query: 113 VIMTSESCRNGTERCNE--ALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAV 170
V++T E +GT+R E +L LE + IVVN+QGDEPLI P +ID V L A +A
Sbjct: 67 VLLTREDHESGTDRLAEVASLLGLEPEA-IVVNVQGDEPLIPPVVIDQVAANLAAHTEAR 125
Query: 171 FSTAVTSLKPEDA-FDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ------FPYLL 223
+T ++ +A F+PN VK V D +G A+ FSR +P+ + + PY
Sbjct: 126 MATLAEPIEELEALFNPNVVKVVSDVNGLALTFSRATLPWARDDFAKDREHLPEGVPYRR 185
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDAPEDV 282
H+GI +Y + FL+ + P L+ E LEQL+ L +G ++ V ++ GVD +D+
Sbjct: 186 HIGIYAYRAGFLQDFVNWGPCWLETTERLEQLRALWHGVRIHVADALEAPPTGVDTQQDL 245
Query: 283 EKIESFM 289
E++ +
Sbjct: 246 ERVRRLL 252
>gi|429103813|ref|ZP_19165787.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Cronobacter
turicensis 564]
gi|426290462|emb|CCJ91900.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Cronobacter
turicensis 564]
Length = 245
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 144/244 (59%), Gaps = 7/244 (2%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR+AS+R GKPLV+I GKPMI ER++ + ++VATD +A + G +
Sbjct: 3 IIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGAARIIVATDHPDVARAIEAAGGE 61
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MT ++GTER E ++K D ++VN+QGDEP+I P II V + L + +
Sbjct: 62 VCMTRADHQSGTERLAEVVEKCGFDDDTVIVNVQGDEPMIPPAIIRQVAENLAGSQAGMA 121
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP----YLLHLGI 227
+ AV ++AF+PN VK V+D GYA+YFSR IP+++ + +L H+GI
Sbjct: 122 TLAVPVHDAQEAFNPNAVKVVMDAQGYALYFSRATIPWDRDRFAQSRDTIGDSFLRHIGI 181
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKIE 286
Y + F++ Y +PL+ E LEQL+VL +G K+ V + GVD P+D+E++
Sbjct: 182 YGYRAGFIRRYVTWPASPLEQIEMLEQLRVLWHGEKIHVAVAAVVPGTGVDTPDDLERVR 241
Query: 287 SFMR 290
+ MR
Sbjct: 242 AEMR 245
>gi|421498831|ref|ZP_15945910.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Aeromonas media
WS]
gi|407182161|gb|EKE56139.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Aeromonas media
WS]
Length = 249
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 100/245 (40%), Positives = 146/245 (59%), Gaps = 7/245 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V +IPAR+AS+R GKPL +I GKPM+Q E++ L + D ++VATDDE + + + G
Sbjct: 4 VVVIPARYASTRLPGKPLADIHGKPMVQHVVEKA-LQSGADRVIVATDDELVRQALRATG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MTS ++GTER E + D I+VN+QGDEPLI P II V L AA
Sbjct: 63 VEVCMTSPDHQSGTERLAEVCRHYGFAADTIIVNVQGDEPLIPPVIIRQVADNLAAATAP 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS--GKVNPQF--PYLLHL 225
+ + +V E+AF+PN VK V D GYA+YFSR IP+++ K + Q Y H+
Sbjct: 123 MATLSVPIKDAEEAFNPNAVKVVTDKDGYALYFSRASIPWDRDRFAKSHEQIGNHYQRHI 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIK-VDHEAHGVDAPEDVEK 284
GI +Y + F++ Y P+ L+ E LEQL+VL G K+ V + ++ GVD D++K
Sbjct: 183 GIYAYRAGFIQRYVDWAPSALEQVEALEQLRVLWYGEKIHVAQALEAPPVGVDTQTDLDK 242
Query: 285 IESFM 289
+ + +
Sbjct: 243 VRALL 247
>gi|292493391|ref|YP_003528830.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Nitrosococcus
halophilus Nc4]
gi|291581986|gb|ADE16443.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Nitrosococcus
halophilus Nc4]
Length = 257
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/250 (38%), Positives = 147/250 (58%), Gaps = 10/250 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR+ SSR GKPL+++ GKPM+ E+++ + + ++VATDD +I + +G
Sbjct: 6 IIPARYGSSRLPGKPLLDLAGKPMLLHVVEKAQ-ESGAEEILVATDDRRIEAIVKGWGIQ 64
Query: 113 VIMTSESCRNGTERCNEAL-QKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDA-V 170
V MTS +GTER E + Q+ ++VN+QGDEPL+ P +I K L+ P+A V
Sbjct: 65 VCMTSTEHSSGTERLAEVVAQQDYSNQTLIVNVQGDEPLLPPSLIAQAAKDLELHPEADV 124
Query: 171 FSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS-----GKVNP-QFPYLLH 224
+ +V E+ F+PN VK V D GYA+YFSR IP+ + ++ P +PY H
Sbjct: 125 ATLSVNIANREELFNPNIVKVVRDAQGYALYFSRAPIPWAREDFAAENRIWPTSWPYYRH 184
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDH-EAHGVDAPEDVE 283
LG+ +Y + FL+ YP L P PL+ E LEQL+VL +G ++ V D GVD D+E
Sbjct: 185 LGLYTYRAGFLRSYPQLPPCPLEQAERLEQLRVLYHGGRIHVAVADVIPPPGVDTQADLE 244
Query: 284 KIESFMRERN 293
+ + +++
Sbjct: 245 QARQLLAQKD 254
>gi|117618893|ref|YP_857280.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Aeromonas
hydrophila subsp. hydrophila ATCC 7966]
gi|166220462|sp|A0KLX9.1|KDSB_AERHH RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|117560300|gb|ABK37248.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Aeromonas
hydrophila subsp. hydrophila ATCC 7966]
Length = 253
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 101/249 (40%), Positives = 147/249 (59%), Gaps = 11/249 (4%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKI----AECC 106
V +IPAR+AS+R GKPL +I GKPM+Q E++ L + D ++VATDDE++ A C
Sbjct: 4 VVVIPARYASTRLPGKPLADIHGKPMVQHVVEKA-LQSGADRVIVATDDERVQQALAACA 62
Query: 107 QQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQA 165
Q G +V MTS+ ++GTER E + D IVVN+QGDEPLI P II V L A
Sbjct: 63 GQAGFEVCMTSKDHQSGTERLAEVCRHYGFAADTIVVNVQGDEPLIPPVIIRQVADNLAA 122
Query: 166 APDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK----SGKVNPQFPY 221
A + + +V E+ F+PN VK V D GYA+YFSR IP+++ + + Y
Sbjct: 123 ATAPMATLSVPIQDAEEVFNPNAVKVVTDQEGYALYFSRASIPWDRDRFAASREQIGDHY 182
Query: 222 LLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIK-VDHEAHGVDAPE 280
H+GI +Y + F++ Y P+ L+ E LEQL+VL G K+ V + ++ GVD
Sbjct: 183 QRHIGIYAYRAGFIQRYVDWAPSALEQIEALEQLRVLWYGEKIHVAQALEAPPVGVDTQA 242
Query: 281 DVEKIESFM 289
D++K+ + +
Sbjct: 243 DLDKVRALL 251
>gi|432776040|ref|ZP_20010304.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE54]
gi|431316560|gb|ELG04365.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE54]
Length = 246
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 88/242 (36%), Positives = 142/242 (58%), Gaps = 5/242 (2%)
Query: 48 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQ 107
S+ V +IPAR+ SSR GKPL++I+GKPMIQ +ER+ + + VATDD ++ + Q
Sbjct: 2 SKAVIVIPARYGSSRLPGKPLLDIVGKPMIQHVYERALQVAGVAEVWVATDDPRVEQAVQ 61
Query: 108 QFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
FG IMT +GT+R E + +E DI +N+QGDEP+I P ++ +++ ++ P
Sbjct: 62 AFGGKAIMTRNDHESGTDRLVEVMHTVEA--DIYINLQGDEPMIRPRDVETLLQGMRDDP 119
Query: 168 DAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+T ++ E+A +P+ VK VV+ A+YFSR IPY ++ + + YL H+GI
Sbjct: 120 ALPVATLCHTITAEEATEPSTVKVVVNTRQDALYFSRSPIPYPRNAE---KARYLKHVGI 176
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
+Y + L+ Y L + + E LEQL+++ G ++ +V GVD P +EK+ +
Sbjct: 177 YAYRRDVLQNYSQLPESMQEQAESLEQLRLMNAGINIRTFEVAATGPGVDTPACLEKVRA 236
Query: 288 FM 289
M
Sbjct: 237 LM 238
>gi|422959724|ref|ZP_16971359.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
H494]
gi|371594725|gb|EHN83585.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
H494]
Length = 246
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 89/242 (36%), Positives = 143/242 (59%), Gaps = 5/242 (2%)
Query: 48 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQ 107
S+ V +IPAR+ SSR GKPL++I+GKPMIQ +ER+ + + VATDD+ + + Q
Sbjct: 2 SKAVIVIPARYGSSRLPGKPLLDIVGKPMIQHVYERALQVAGVAEVWVATDDQCVEKAVQ 61
Query: 108 QFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
FG IMT +GT+R E + K+E DI +N+QGDEP+I P ++ +++ ++ P
Sbjct: 62 AFGGKAIMTRNDHESGTDRLVEVMHKVEA--DIYINLQGDEPMIRPRDVETLLQGMRDDP 119
Query: 168 DAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+T ++ E+A +P+ VK VV+ A+YFSR IPY ++ + + YL H+GI
Sbjct: 120 ALPVATLCHAISAEEAAEPSTVKVVVNTRQDALYFSRSPIPYPRNAE---KARYLKHVGI 176
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
+Y + L+ Y L + + E LEQL+++ G ++ +V GVD P +EK+ +
Sbjct: 177 YAYRRDVLQNYSQLPESMPEQAESLEQLRLMSAGINIRTFEVAATGPGVDTPACLEKVRA 236
Query: 288 FM 289
M
Sbjct: 237 LM 238
>gi|94987431|ref|YP_595364.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Lawsonia
intracellularis PHE/MN1-00]
gi|442556279|ref|YP_007366104.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Lawsonia
intracellularis N343]
gi|226724312|sp|Q1MPN4.1|KDSB_LAWIP RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|94731680|emb|CAJ55043.1| CMP-2-keto-3-deoxyoctulosonic acid synthetase [Lawsonia
intracellularis PHE/MN1-00]
gi|441493726|gb|AGC50420.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Lawsonia
intracellularis N343]
Length = 254
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 94/242 (38%), Positives = 143/242 (59%), Gaps = 4/242 (1%)
Query: 52 GIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGA 111
GIIPAR+ SSR GKPL++I GKPM ++ + + +V+ATD E+IAE Q
Sbjct: 10 GIIPARYGSSRLPGKPLIDIWGKPMFWYVYQNAVESNIFRSVVLATDSEEIAESAHQLSI 69
Query: 112 DVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAV 170
+MTS +GT+R EA K+ + D +VVNIQGDEPL++PE I +V+ V
Sbjct: 70 PYVMTSVEHISGTDRVYEAAIKMNIEPDSVVVNIQGDEPLVKPEAIQQLVEPFIDVSIQV 129
Query: 171 FSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSY 230
+T T + A P++VK VV ++G A+YFSR IPY + + YL H+G+ ++
Sbjct: 130 -TTLSTRITANQAMLPHQVKVVVSSNGDALYFSRAAIPYLRDNDTDGY--YLGHIGLYAF 186
Query: 231 DSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFMR 290
+ L + L P+ L+ E LEQL++LEN ++V+ +H + GVD ED+E ++ +
Sbjct: 187 RMHTLDKFVHLPPSQLEQFEKLEQLRLLENNIPIRVVNTNHTSQGVDTVEDLEIVQGLLA 246
Query: 291 ER 292
+R
Sbjct: 247 QR 248
>gi|421560222|ref|ZP_16006081.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Neisseria
meningitidis NM2657]
gi|254669576|emb|CBA03570.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Neisseria
meningitidis alpha153]
gi|402340395|gb|EJU75595.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Neisseria
meningitidis NM2657]
Length = 348
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 94/241 (39%), Positives = 140/241 (58%), Gaps = 6/241 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ V ++PAR+AS+R GKPL +I GKPMIQ +ER+ +D ++VA DD ++AE +
Sbjct: 7 KTVIVVPARYASTRLPGKPLADICGKPMIQHVYERACKVPYIDDVIVAVDDRRVAEVVES 66
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG VIMTS +GT+R E + K DI +NIQGDEPLI E I + + ++
Sbjct: 67 FGGKVIMTSTQHDSGTDRLVEVMGKYAA--DIYINIQGDEPLIRSEDIALLAQGMKDEQI 124
Query: 169 AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQ 228
+V T +L +A +PN VK V+ +G A+YFSR IPY + + Y H+G+
Sbjct: 125 SV-GTLCHALPASEATNPNTVKVVLSANGNALYFSRSPIPYPRDKE---HAYYFKHIGVY 180
Query: 229 SYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESF 288
+Y L Y L ++L E LEQL++L+ G ++V +V GVD PE +E++ +
Sbjct: 181 AYRKETLAKYSNLKQPDIELSEKLEQLRLLDAGIDIRVFEVPETGPGVDTPECLERVRAI 240
Query: 289 M 289
M
Sbjct: 241 M 241
>gi|421484458|ref|ZP_15932027.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Achromobacter
piechaudii HLE]
gi|400197377|gb|EJO30344.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Achromobacter
piechaudii HLE]
Length = 254
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 99/244 (40%), Positives = 139/244 (56%), Gaps = 10/244 (4%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
+ +IPAR AS+R KPL +I GKPM+ RT ER+ L+ L +ATDD ++ G
Sbjct: 4 IALIPARTASTRLPDKPLADIAGKPMVVRTAERAALSGA-SQLYIATDDVRVQAAADAHG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+MT GT+R EA+++L D IVVN+QGDEPLIEPE+ID V LQA P+A
Sbjct: 63 LTALMTRGDHPTGTDRLAEAVEQLGLPDDAIVVNVQGDEPLIEPELIDAVAAKLQAHPEA 122
Query: 170 VFSTAVTSLKPEDA-FDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ------FPYL 222
+T L DA F+PN VK V G A+YFSR IP+ + + P
Sbjct: 123 DIATCACPLADADALFNPNVVKLVCAVDGRALYFSRAPIPWARDALAAGERVLADGLPAW 182
Query: 223 LHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDH-EAHGVDAPED 281
H+G+ +Y +FL+ +P L L+ E LEQL+ +E+G+ + V + A GVD P D
Sbjct: 183 HHIGLYAYRVSFLRRFPTLPQGVLERFESLEQLRAMEHGHHIVVHRASSPPAAGVDTPAD 242
Query: 282 VEKI 285
+E++
Sbjct: 243 LERV 246
>gi|167855995|ref|ZP_02478741.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Haemophilus
parasuis 29755]
gi|167852877|gb|EDS24145.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Haemophilus
parasuis 29755]
Length = 255
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 97/245 (39%), Positives = 142/245 (57%), Gaps = 9/245 (3%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR+AS+R KPL++I GKPMIQ WE+++ A ++VATD +I + +FG +
Sbjct: 6 IIPARYASTRLPRKPLLDIAGKPMIQHVWEKAQQAGA-TRVIVATDHPEIEQVVTRFGGE 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V +TS+ +GTER E ++K+ D I+VNIQGDEPLI P I+ V + L +
Sbjct: 65 VCLTSDKHNSGTERLAEVIEKMAIADDEIIVNIQGDEPLIPPVIVAQVAENLDKHQVNMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK------SGKVNPQFPYLLHL 225
+ AV E+ F+PN VK + D +G A+YFSR IP+ + Q YL H+
Sbjct: 125 TLAVKLTTREELFNPNVVKTLTDKNGMALYFSRATIPFGRDYFPQCDDTFVQQQNYLRHI 184
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI +Y + F+K Y PT L+ E LEQL+ L G K+ + + + GVD ED+E+
Sbjct: 185 GIYAYRAGFVKQYVAWEPTALEQLESLEQLRALWYGEKIHLDLAKEAPQVGVDTAEDLER 244
Query: 285 IESFM 289
+ +
Sbjct: 245 VRQIL 249
>gi|251789906|ref|YP_003004627.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Dickeya zeae
Ech1591]
gi|247538527|gb|ACT07148.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Dickeya zeae
Ech1591]
Length = 250
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 97/244 (39%), Positives = 143/244 (58%), Gaps = 7/244 (2%)
Query: 52 GIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGA 111
IIPAR+AS+R GKPL +I GKPM+ ER++ + +VVATD+ +A +Q G
Sbjct: 5 AIIPARYASTRLPGKPLADIHGKPMVIHVMERAR-ESGAGRVVVATDNADVARAVEQAGG 63
Query: 112 DVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAV 170
+V +TS + +GTER E + + D I+VN+QGDEPLI P II V + L + +
Sbjct: 64 EVCLTSPNHNSGTERLAEVIDRYGFTDDEIIVNVQGDEPLIPPVIIRQVAENLAGSRAGM 123
Query: 171 FSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP----YLLHLG 226
+ AV E+ F+PN VK V D GYA+YFSR IP+ + + +L H+G
Sbjct: 124 ATLAVPITTCEEVFNPNAVKVVTDAEGYALYFSRATIPWERDRFAESRDSIGDHFLRHIG 183
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKI 285
I +Y + F++ Y G P+ L+ E LEQL+VL G K+ V + + + GVD PED+ ++
Sbjct: 184 IYAYRAGFIRRYVGWAPSQLEKIEMLEQLRVLWYGEKIHVAVAKEVPSVGVDTPEDLARV 243
Query: 286 ESFM 289
+ M
Sbjct: 244 RAAM 247
>gi|421556054|ref|ZP_16001971.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Neisseria
meningitidis 80179]
gi|421566541|ref|ZP_16012285.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Neisseria
meningitidis NM3001]
gi|38145968|emb|CAE11288.1| Cap29eG protein [Neisseria meningitidis]
gi|402337907|gb|EJU73146.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Neisseria
meningitidis 80179]
gi|402345145|gb|EJU80269.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Neisseria
meningitidis NM3001]
Length = 429
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 94/241 (39%), Positives = 140/241 (58%), Gaps = 6/241 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ V ++PAR+AS+R GKPL +I GKPMIQ +ER+ +D ++VA DD ++AE +
Sbjct: 7 KTVIVVPARYASTRLPGKPLADICGKPMIQHVYERACKVPYIDDVIVAVDDRRVAEVVES 66
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG VIMTS +GT+R E + K DI +NIQGDEPLI E I + + ++
Sbjct: 67 FGGKVIMTSTQHDSGTDRLVEVMGKYAA--DIYINIQGDEPLIRSEDIALLAQGMKDEQI 124
Query: 169 AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQ 228
+V T +L +A +PN VK V+ +G A+YFSR IPY + + Y H+G+
Sbjct: 125 SV-GTLCHALPASEATNPNTVKVVLSANGNALYFSRSPIPYPRDKE---HAYYFKHIGVY 180
Query: 229 SYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESF 288
+Y L Y L ++L E LEQL++L+ G ++V +V GVD PE +E++ +
Sbjct: 181 AYRKETLAKYSNLKQPDIELSEKLEQLRLLDAGIDIRVFEVPETGPGVDTPECLERVRAI 240
Query: 289 M 289
M
Sbjct: 241 M 241
>gi|409398221|ref|ZP_11249042.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas sp.
Chol1]
gi|409117354|gb|EKM93788.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas sp.
Chol1]
Length = 254
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 99/248 (39%), Positives = 141/248 (56%), Gaps = 14/248 (5%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ASSR GKPL +I GKPMIQ WE++ + +VVATDDE+I C FGA+
Sbjct: 8 VIPARYASSRLPGKPLQDIAGKPMIQHVWEQASRSAA-QRVVVATDDERILSACGAFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
++T +GT+R E L + IVVN+QGDEPLI P +ID V L A P+A
Sbjct: 67 AVLTRVEHNSGTDRLAEVADLLGLDAEAIVVNVQGDEPLIPPAVIDQVAANLAAHPEAAI 126
Query: 172 STAVTSLKPEDA---FDPNRVKCVVDNHGYAIYFSRGLIPYNKSG-----KVNPQ-FPYL 222
+T + DA F+PN VK + D +G A+ FSR +P+ + + PQ PY
Sbjct: 127 ATLAEPIT--DAATLFNPNAVKVLADVNGLALAFSRAPLPWARDAFAQNREALPQGVPYR 184
Query: 223 LHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDAPED 281
H+GI +Y + FL + P L+ E LEQL+ L +G ++ V ++ GVD ED
Sbjct: 185 RHIGIYAYRAGFLANFVAWGPCWLENTECLEQLRALWHGQRIHVADAIEAPPAGVDTLED 244
Query: 282 VEKIESFM 289
+E++ +
Sbjct: 245 LERVRRLL 252
>gi|78486478|ref|YP_392403.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Thiomicrospira
crunogena XCL-2]
gi|123554897|sp|Q31DP4.1|KDSB2_THICR RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase 2;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase 2; Short=CKS 2; Short=CMP-KDO synthase 2
gi|78364764|gb|ABB42729.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Thiomicrospira
crunogena XCL-2]
Length = 248
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 94/242 (38%), Positives = 145/242 (59%), Gaps = 8/242 (3%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IPAR+ SSR GKPL I GKPMIQ +ER AT ++ + VATDD++I E ++FG +
Sbjct: 6 FIPARYGSSRLPGKPLKLINGKPMIQHVFERISKATGIEAVYVATDDDRIKEVVEKFGGN 65
Query: 113 VIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP-DAV 170
V+MT +GT+R +A Q L+ K+ D++VN+QGD+PL+ I+ V+ +AA D
Sbjct: 66 VVMTPPEAESGTDRIAQAAQALDLKEDDLIVNVQGDQPLVNQGSIEAVIAPFKAADYDGS 125
Query: 171 FSTAVTSLK---PEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
F + S K + P VK V D +G+A+YFSR IP+ + + + HLG+
Sbjct: 126 FEMSTLSFKIVNEAEITSPKDVKLVTDVNGFALYFSRATIPHGRDYWDHDSYK---HLGV 182
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
+Y F+ ++ L L+ E LEQL+ LE G+K+KV++ + ++ VD P D+E +E+
Sbjct: 183 YAYTKRFVDLFNTLPMGHLEDIEKLEQLRALEYGHKIKVVESEWDSPEVDLPGDIEMMEA 242
Query: 288 FM 289
+
Sbjct: 243 LL 244
>gi|110677774|ref|YP_680781.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Roseobacter
denitrificans OCh 114]
gi|109453890|gb|ABG30095.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Roseobacter
denitrificans OCh 114]
Length = 266
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 101/261 (38%), Positives = 140/261 (53%), Gaps = 22/261 (8%)
Query: 54 IPARFASSRFEGKPLVNILGKP-----MIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
IPAR+ASSR+ GKPLV + G +I+R+W + + +D +VVATDD +I + Q
Sbjct: 7 IPARYASSRYPGKPLVGLRGASGQTLSLIERSWRAAMEVSGIDRVVVATDDTRIQDAAQA 66
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FGA+V+MTS C NGTERC E L YDIVVN+QGD PL I+ +V L AP
Sbjct: 67 FGAEVVMTSPYCANGTERCAEVHAALGGGYDIVVNLQGDAPLTPAWFIEDLVAGLLNAPT 126
Query: 169 AVFSTAVTS---------LKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPY-NKSGKVNPQ 218
A +T V L A V +A+YFS+ +IP+ ++ + Q
Sbjct: 127 AEIATPVLRCDGETLQGLLNDRKAGRVGGTTAVFAQDNHALYFSKEVIPFTSRDYSEDAQ 186
Query: 219 FPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHG--- 275
P H+G+ +Y L YPG PL+ E LEQL+ +ENG V+ V+ EA G
Sbjct: 187 TPVFHHVGVYAYRPAALAAYPGWQVGPLEQLEGLEQLRFMENG--RSVLCVEVEAKGRQF 244
Query: 276 --VDAPEDVEKIESFMRERNL 294
++ PEDV ++E+ M L
Sbjct: 245 WELNNPEDVPRLEAMMAAMGL 265
>gi|283833791|ref|ZP_06353532.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Citrobacter
youngae ATCC 29220]
gi|291070456|gb|EFE08565.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Citrobacter
youngae ATCC 29220]
Length = 248
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 99/248 (39%), Positives = 145/248 (58%), Gaps = 11/248 (4%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPAR+AS+R GKPL++I G+PMI ER++ + + ++VATD E +A + G
Sbjct: 4 VVIIPARYASTRLPGKPLLDINGRPMIVHVLERAR-ESGAERIIVATDHEDVARAVEAVG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D ++VN+QGDEP+I II V + L
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCGFSDDTVIVNVQGDEPMIPAVIIRQVAENLAQRQVG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSG------KVNPQFPYLL 223
+ + A E+AF+PN VK V+D+ GYA+YFSR IP+++ V F L
Sbjct: 123 MATLAAPIHSAEEAFNPNAVKVVLDSEGYALYFSRATIPWDRDRFAKSLETVGDTF--LR 180
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDV 282
HLGI Y + F++ Y P+PL+ E LEQL+VL G K+ V + + GVD ED+
Sbjct: 181 HLGIYGYRAGFIRRYVNWQPSPLEHIEMLEQLRVLWYGEKIHVAVAKEVPGTGVDTAEDL 240
Query: 283 EKIESFMR 290
E++ + MR
Sbjct: 241 ERVRAEMR 248
>gi|395796681|ref|ZP_10475976.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas sp.
Ag1]
gi|395339245|gb|EJF71091.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas sp.
Ag1]
Length = 254
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 99/246 (40%), Positives = 143/246 (58%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IP+R+AS+R GKPL I KPMIQ WE++ ++ + +VVATDD +I E C+ FGA+
Sbjct: 8 VIPSRYASTRLPGKPLQLIGNKPMIQLVWEQA-CKSSAERVVVATDDPRIIEACKGFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
++T E +GT+R E KL D IVVN+QGDEPLI P +ID V L A +A
Sbjct: 67 AVLTREDHNSGTDRLAEVATKLGLAADAIVVNVQGDEPLIPPSVIDQVAANLAAHGEARM 126
Query: 172 STAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSG-----KVNPQ-FPYLLH 224
+T ++ E F+PN VK V D +G A+ FSR +P+ + V P PY H
Sbjct: 127 ATLAEPIEDIETLFNPNVVKVVSDINGLALTFSRSTLPWARDAFAKQPDVLPAGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVE 283
+GI +Y + FL + P L+ E LEQL+ L +G ++ V ++ GVD PED+E
Sbjct: 187 IGIYAYRAGFLHDFVSWGPCWLENTESLEQLRALWHGVRIHVGDALEAPPAGVDTPEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|194337425|ref|YP_002019219.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pelodictyon
phaeoclathratiforme BU-1]
gi|226724314|sp|B4SES6.1|KDSB_PELPB RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|194309902|gb|ACF44602.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pelodictyon
phaeoclathratiforme BU-1]
Length = 247
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 94/247 (38%), Positives = 151/247 (61%), Gaps = 11/247 (4%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ V +IPAR SSR + K L ++ G+P+I RTW ++ + + +VVATD +IA
Sbjct: 2 KAVILIPARLDSSRLDRKMLADLEGEPLIVRTWRQALKSRLAEKVVVATDSREIAAVLDA 61
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKAL--QAA 166
GA+V+MTS + GTER EA + +E D+ VN+QGDEPLI PE ID ++ +
Sbjct: 62 CGAEVVMTSPTASCGTERIAEAARHIEG--DVFVNLQGDEPLISPENIDLALEPFFSENP 119
Query: 167 PDAVFSTAVTSLKPEDAF---DPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLL 223
PD ST V L+P+D DP++VK V+D G+A+YFSR IP+ ++ + P
Sbjct: 120 PDC--STLVLPLRPDDHVQIEDPHQVKVVMDAKGFALYFSRSAIPFQRN--MRPTTIVYR 175
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVE 283
H+G+ ++ ++ L+ + L P+ L+ E LEQL++LENG++++ + + GV+ ED+E
Sbjct: 176 HIGLYAFSADVLQKFASLPPSMLEEAESLEQLRLLENGFRIQCVTTLVDNPGVNTVEDLE 235
Query: 284 KIESFMR 290
++ +R
Sbjct: 236 QVRRIIR 242
>gi|442600064|ref|ZP_21017762.1| CMP-Kdo synthetase, KpsU [Escherichia coli O5:K4(L):H4 str. ATCC
23502]
gi|441651084|emb|CCQ03252.1| CMP-Kdo synthetase, KpsU [Escherichia coli O5:K4(L):H4 str. ATCC
23502]
Length = 246
Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 88/242 (36%), Positives = 142/242 (58%), Gaps = 5/242 (2%)
Query: 48 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQ 107
S+ V +IPAR+ SSR GKPL++I+GKPMIQ +ER+ + + VATDD ++ + Q
Sbjct: 2 SKAVIVIPARYGSSRLPGKPLLDIVGKPMIQHVYERALQVAGVAEVWVATDDPRVEQAVQ 61
Query: 108 QFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
FG IMT +GT+R E + K+E DI +N+QGDEP+I P ++ +++ ++ P
Sbjct: 62 AFGGKAIMTRNDHESGTDRLVEVMHKVEA--DIYINLQGDEPMIRPRDVETLLQGMRDDP 119
Query: 168 DAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+T ++ +A +P+ VK VV+ A+YFSR IPY ++ + + YL H+GI
Sbjct: 120 ALPVATLCHAISAAEAAEPSTVKVVVNTRQDALYFSRSPIPYPRNAE---KARYLKHVGI 176
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
+Y + L+ Y L + + E LEQL+++ G ++ +V GVD P +EK+ +
Sbjct: 177 YAYRRDVLQNYSQLPESMPEQAESLEQLRLMSAGINIRTFEVAATGPGVDTPACLEKVRA 236
Query: 288 FM 289
M
Sbjct: 237 LM 238
>gi|254449702|ref|ZP_05063139.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Octadecabacter
arcticus 238]
gi|198264108|gb|EDY88378.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Octadecabacter
arcticus 238]
Length = 266
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 101/263 (38%), Positives = 145/263 (55%), Gaps = 22/263 (8%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILG-----KPMIQRTWERSKLATTLDHLVVATDDEKIA 103
+V+ +IPAR+AS+R+ GKPLV + G + +IQR+W+ ++ T +D + VATDD++I
Sbjct: 2 KVLVVIPARYASTRYPGKPLVELRGATGEARSLIQRSWDAAQGVTGVDRVAVATDDDRIK 61
Query: 104 ECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKAL 163
+ FGA+V+MTS C+NGTERC EAL KL YDIVVN+QGD PL I+ +V L
Sbjct: 62 SAAEAFGAEVVMTSADCQNGTERCAEALDKLGGGYDIVVNLQGDAPLTPAWFIEDLVAGL 121
Query: 164 QAAPDAVFSTAVTS---------LKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPY-NKSG 213
A P A +T V L V A++FS+ +IPY +
Sbjct: 122 SAHPVAEVATPVLRCDGRALNGLLNDRRQGRVGGTTAVFGADHNALFFSKEVIPYTGQEF 181
Query: 214 KVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEA 273
+ P H+G+ +Y + L YP PL+ E LEQL+ LE G M ++V EA
Sbjct: 182 DDADETPVFHHVGVYAYRPSALAAYPRWASGPLEHLEGLEQLRFLERGAHMLCVEV--EA 239
Query: 274 HG-----VDAPEDVEKIESFMRE 291
G ++ P+DV KIE+ + E
Sbjct: 240 RGRQFWELNNPQDVPKIEAMLAE 262
>gi|398846323|ref|ZP_10603313.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas sp.
GM84]
gi|398252687|gb|EJN37854.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas sp.
GM84]
Length = 428
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 88/241 (36%), Positives = 136/241 (56%), Gaps = 5/241 (2%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
RV +IPAR+ S+R GKPL +I GKPM+Q +ER+ +V+ATDDE++AE +
Sbjct: 7 RVAIVIPARYGSTRLPGKPLADIAGKPMVQHVYERALQVANAQVVVIATDDERVAEAVRG 66
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG +MTS +GT+R E + +++ DI +N+QGDEPL+ P I+ + + A
Sbjct: 67 FGGACVMTSPDHPSGTDRLAEVMAQVDA--DIYINLQGDEPLVRPADIEALAAGMLADAS 124
Query: 169 AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQ 228
T + +A +PN VK V+ +G A+YFSR IPY + + YL H+G+
Sbjct: 125 VNVGTLCHPIDAHEAGNPNTVKVVLAGNGNALYFSRSPIPYPRDSEAA---TYLKHVGVY 181
Query: 229 SYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESF 288
+Y L Y L ++ E LEQL+++ GY ++ V+ GVD PE +E++ +
Sbjct: 182 AYRREVLAEYANLPQPMMEHAEKLEQLRLMAAGYCIRAYVVEPTGPGVDTPECLEQVRAL 241
Query: 289 M 289
M
Sbjct: 242 M 242
>gi|359452186|ref|ZP_09241541.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudoalteromonas
sp. BSi20495]
gi|358050780|dbj|GAA77790.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudoalteromonas
sp. BSi20495]
Length = 253
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 103/253 (40%), Positives = 158/253 (62%), Gaps = 12/253 (4%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V +IPARFAS+R GKPL +I GKPM+Q +E++ L+ ++VATD +K+ + F
Sbjct: 4 VVVIPARFASTRLPGKPLADICGKPMVQHVYEKACLSGA-SKVIVATDHQKVFDAVSLFT 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKAL--QAAP 167
+DV+MT E ++GTER E + L+ D IVVN+QGDEPL+ PE + V L AP
Sbjct: 63 SDVVMTREDHQSGTERLAEVVDLLKLDNDTIVVNVQGDEPLLAPENVSQVAALLSDSTAP 122
Query: 168 DAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF-----PYL 222
A S A+ + ++ F+PN VK V D + A+YFSR IP++++ ++ P+
Sbjct: 123 MATLSVAIE--ERDEVFNPNAVKVVSDINKNALYFSRASIPFDRNTMMDDSTALNLSPFQ 180
Query: 223 LHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAH-GVDAPED 281
H+GI +Y + F+K Y L +PL+L E LEQL+VL +GYK+K+ + H GVD P+D
Sbjct: 181 RHVGIYAYRAGFIKQYIELSVSPLELLESLEQLRVLYHGYKIKIEQAQIAPHAGVDTPDD 240
Query: 282 VEKIESFMRERNL 294
+ K+ + ++ +N+
Sbjct: 241 LAKVIAHIKSKNV 253
>gi|254459329|ref|ZP_05072750.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Sulfurimonas
gotlandica GD1]
gi|373866594|ref|ZP_09602992.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Sulfurimonas
gotlandica GD1]
gi|207083942|gb|EDZ61233.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Sulfurimonas
gotlandica GD1]
gi|372468695|gb|EHP28899.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Sulfurimonas
gotlandica GD1]
Length = 238
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 94/243 (38%), Positives = 144/243 (59%), Gaps = 13/243 (5%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR AS+RF K L +I G PM+ RT +R + LD +VVA DDE I + C++ G +
Sbjct: 3 IIPARLASTRFPKKVLADIGGLPMVVRTAKRVE---HLDRVVVAADDESIIKICREHGIE 59
Query: 113 VIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDA-- 169
++TS + ++GT+R NE L +I++N+Q DEP IE E+++ ++ L++ +
Sbjct: 60 AMLTSTTHKSGTDRINECATILNVSDEEIIINVQADEPFIETEVVESLILKLKSLQEKNE 119
Query: 170 --VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+ + ++ E A DPN VK V+D+ AIYFSR LIPYN+SG+ Y H+GI
Sbjct: 120 KFIMGSCYNAINAESAKDPNLVKVVLDDEDNAIYFSRSLIPYNRSGRAT----YFGHIGI 175
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEK-IE 286
+ LK + L P++ E LEQL+ + + K+ +IKV G+D PED+ + IE
Sbjct: 176 YGFSKKSLKEFCNLSDAPIEDIEGLEQLRAIYHQKKITMIKVASTGFGIDTPEDLARAIE 235
Query: 287 SFM 289
F+
Sbjct: 236 IFL 238
>gi|218706568|ref|YP_002414087.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
UMN026]
gi|227887645|ref|ZP_04005450.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
83972]
gi|293406561|ref|ZP_06650487.1| CMP-Kdo synthetase [Escherichia coli FVEC1412]
gi|298382301|ref|ZP_06991898.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
FVEC1302]
gi|300900272|ref|ZP_07118451.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 198-1]
gi|300973540|ref|ZP_07172254.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 45-1]
gi|301019375|ref|ZP_07183557.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 196-1]
gi|386620564|ref|YP_006140144.1| 3-deoxy-manno-octulosonate cytidyltransferase [Escherichia coli
NA114]
gi|386630810|ref|YP_006150530.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
str. 'clone D i2']
gi|386635730|ref|YP_006155449.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
str. 'clone D i14']
gi|386640544|ref|YP_006107342.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase KpsU [Escherichia
coli ABU 83972]
gi|404376352|ref|ZP_10981513.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia sp.
1_1_43]
gi|419934871|ref|ZP_14451963.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
576-1]
gi|422365993|ref|ZP_16446469.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 153-1]
gi|432393542|ref|ZP_19636366.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE21]
gi|432403338|ref|ZP_19646083.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE26]
gi|432413173|ref|ZP_19655828.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE39]
gi|432458073|ref|ZP_19700250.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE201]
gi|432462298|ref|ZP_19704434.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE204]
gi|432467255|ref|ZP_19709334.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE205]
gi|432497067|ref|ZP_19738860.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE214]
gi|432544697|ref|ZP_19781533.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE236]
gi|432550180|ref|ZP_19786940.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE237]
gi|432565304|ref|ZP_19801869.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE51]
gi|432581866|ref|ZP_19818280.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE57]
gi|432623277|ref|ZP_19859297.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE76]
gi|432632835|ref|ZP_19868756.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE80]
gi|432767324|ref|ZP_20001718.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE50]
gi|432784919|ref|ZP_20019097.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE63]
gi|432963410|ref|ZP_20152829.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE202]
gi|432975153|ref|ZP_20163988.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE209]
gi|432996713|ref|ZP_20185296.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE218]
gi|433049387|ref|ZP_20236725.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE120]
gi|433058491|ref|ZP_20245541.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE124]
gi|433064405|ref|ZP_20251317.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE125]
gi|433068338|ref|ZP_20255131.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE128]
gi|433074182|ref|ZP_20260826.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE129]
gi|433087676|ref|ZP_20274049.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE137]
gi|433116828|ref|ZP_20302614.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE153]
gi|433184655|ref|ZP_20368894.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE85]
gi|442592953|ref|ZP_21010910.1| CMP-Kdo synthetase, KpsU [Escherichia coli O10:K5(L):H4 str. ATCC
23506]
gi|442605137|ref|ZP_21019969.1| CMP-Kdo synthetase, KpsU [Escherichia coli Nissle 1917]
gi|1170717|sp|P42216.3|KPSU5_ECOLX RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|397407|emb|CAA52657.1| CMP-KDO synthetase [Escherichia coli]
gi|913366|gb|AAB33584.1| CMP-Kdo-synthetase [Escherichia coli]
gi|47600695|emb|CAE55817.1| 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO
synthetase) KpsU [Escherichia coli Nissle 1917]
gi|218433665|emb|CAR14580.1| 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO
synthetase) [Escherichia coli UMN026]
gi|226839743|gb|EEH71764.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia sp.
1_1_43]
gi|227835041|gb|EEJ45507.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
83972]
gi|291426567|gb|EFE99599.1| CMP-Kdo synthetase [Escherichia coli FVEC1412]
gi|298277441|gb|EFI18957.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
FVEC1302]
gi|299882248|gb|EFI90459.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 196-1]
gi|300356162|gb|EFJ72032.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 198-1]
gi|300410756|gb|EFJ94294.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 45-1]
gi|307555036|gb|ADN47811.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase KpsU [Escherichia
coli ABU 83972]
gi|315291288|gb|EFU50648.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 153-1]
gi|333971065|gb|AEG37870.1| 3-deoxy-manno-octulosonate cytidyltransferase [Escherichia coli
NA114]
gi|355421709|gb|AER85906.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
str. 'clone D i2']
gi|355426629|gb|AER90825.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
str. 'clone D i14']
gi|388406140|gb|EIL66549.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
576-1]
gi|430915221|gb|ELC36300.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE21]
gi|430923724|gb|ELC44457.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE26]
gi|430933698|gb|ELC54089.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE39]
gi|430980285|gb|ELC97045.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE201]
gi|430986937|gb|ELD03500.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE204]
gi|430991741|gb|ELD08140.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE205]
gi|431021629|gb|ELD34950.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE214]
gi|431072852|gb|ELD80594.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE236]
gi|431077792|gb|ELD84851.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE237]
gi|431091163|gb|ELD96908.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE51]
gi|431122148|gb|ELE25017.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE57]
gi|431157359|gb|ELE58001.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE76]
gi|431167964|gb|ELE68218.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE80]
gi|431322488|gb|ELG10073.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE50]
gi|431328076|gb|ELG15396.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE63]
gi|431471985|gb|ELH51877.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE202]
gi|431487219|gb|ELH66864.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE209]
gi|431503508|gb|ELH82243.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE218]
gi|431562776|gb|ELI36019.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE120]
gi|431569661|gb|ELI42602.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE124]
gi|431579433|gb|ELI52016.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE125]
gi|431584423|gb|ELI56404.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE128]
gi|431585088|gb|ELI57046.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE129]
gi|431604995|gb|ELI74395.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE137]
gi|431632027|gb|ELJ00330.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE153]
gi|431703843|gb|ELJ68527.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE85]
gi|441607343|emb|CCP96351.1| CMP-Kdo synthetase, KpsU [Escherichia coli O10:K5(L):H4 str. ATCC
23506]
gi|441713619|emb|CCQ05946.1| CMP-Kdo synthetase, KpsU [Escherichia coli Nissle 1917]
gi|1095248|prf||2108294A CMP-deoxymannooctulosonate synthetase
Length = 246
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 88/242 (36%), Positives = 142/242 (58%), Gaps = 5/242 (2%)
Query: 48 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQ 107
S+ V +IPAR+ SSR GKPL++I+GKPMIQ +ER+ + + VATDD ++ + Q
Sbjct: 2 SKAVIVIPARYGSSRLPGKPLLDIVGKPMIQHVYERALQVAGVAEVWVATDDPRVEQAVQ 61
Query: 108 QFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
FG IMT +GT+R E + K+E DI +N+QGDEP+I P ++ +++ ++ P
Sbjct: 62 AFGGKAIMTRNDHESGTDRLVEVMHKVEA--DIYINLQGDEPMIRPRDVETLLQGMRDDP 119
Query: 168 DAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+T ++ +A +P+ VK VV+ A+YFSR IPY ++ + + YL H+GI
Sbjct: 120 ALPVATLCHAISAAEAAEPSTVKVVVNTRQDALYFSRSPIPYPRNAE---KARYLKHVGI 176
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
+Y + L+ Y L + + E LEQL+++ G ++ +V GVD P +EK+ +
Sbjct: 177 YAYRRDVLQNYSQLPESMPEQAESLEQLRLMNAGINIRTFEVAATGPGVDTPACLEKVRA 236
Query: 288 FM 289
M
Sbjct: 237 LM 238
>gi|15826304|pdb|1H6J|A Chain A, The Three-Dimensional Structure Of Capsule-Specific
Cmp:2-Keto-3-Deoxy-Manno-Octonic Acid Synthetase From
Escherichia Coli
gi|15826305|pdb|1H6J|B Chain B, The Three-Dimensional Structure Of Capsule-Specific
Cmp:2-Keto-3-Deoxy-Manno-Octonic Acid Synthetase From
Escherichia Coli
gi|15988390|pdb|1H7E|A Chain A, The Structure Of Cmp:2-Keto-3-Deoxy-Manno-Octonic Acid
Synthetase And Of Its Complexes With Substrates And
Substrate Analogues, Apo-Enzyme
gi|15988391|pdb|1H7E|B Chain B, The Structure Of Cmp:2-Keto-3-Deoxy-Manno-Octonic Acid
Synthetase And Of Its Complexes With Substrates And
Substrate Analogues, Apo-Enzyme
gi|15988392|pdb|1H7F|A Chain A, The Structure Of Cmp:2-Keto-3-Deoxy-Manno-Octonic Acid
Synthetase And Of Its Complexes With Substrates And
Substrate Analogues, Cmp Complex
gi|15988393|pdb|1H7F|B Chain B, The Structure Of Cmp:2-Keto-3-Deoxy-Manno-Octonic Acid
Synthetase And Of Its Complexes With Substrates And
Substrate Analogues, Cmp Complex
gi|15988394|pdb|1H7G|A Chain A, The Structure Of Cmp:2-Keto-3-Deoxy-Manno-Octonic Acid
Synthetase And Of Its Complexes With Substrates And
Substrate Analogues, Ctp Mg2+ Complex
gi|15988395|pdb|1H7G|B Chain B, The Structure Of Cmp:2-Keto-3-Deoxy-Manno-Octonic Acid
Synthetase And Of Its Complexes With Substrates And
Substrate Analogues, Ctp Mg2+ Complex
gi|15988396|pdb|1H7H|A Chain A, The Structure Of Cmp:2-Keto-3-Deoxy-Manno-Octonic Acid
Synthetase And Of Its Complexes With Substrates And
Substrate Analogues, Cdp Complex
gi|15988397|pdb|1H7H|B Chain B, The Structure Of Cmp:2-Keto-3-Deoxy-Manno-Octonic Acid
Synthetase And Of Its Complexes With Substrates And
Substrate Analogues, Cdp Complex
gi|15988398|pdb|1H7T|A Chain A, The Structure Of Cmp:2-Keto-3-Deoxy-Manno-Octonic Acid
Synthetase And Of Its Complexes With Substrates And
Substrate Analogues, Here Complex With Cmp-Neuac,
Cmp-Neuac Complex
gi|15988399|pdb|1H7T|B Chain B, The Structure Of Cmp:2-Keto-3-Deoxy-Manno-Octonic Acid
Synthetase And Of Its Complexes With Substrates And
Substrate Analogues, Here Complex With Cmp-Neuac,
Cmp-Neuac Complex
gi|20149865|pdb|1GQ9|A Chain A, The Structure Of Cmp:2-Keto-3-Deoxy-Manno-Octonic Acid
Synthetase Complexed With Ctp At 100k
gi|20149866|pdb|1GQ9|B Chain B, The Structure Of Cmp:2-Keto-3-Deoxy-Manno-Octonic Acid
Synthetase Complexed With Ctp At 100k
gi|20149867|pdb|1GQC|A Chain A, The Structure Of Cmp:2-Keto-3-Deoxy-Manno-Octonic Acid
Synthetase Complexed With Cmp-Kdo At 100k
gi|20149868|pdb|1GQC|B Chain B, The Structure Of Cmp:2-Keto-3-Deoxy-Manno-Octonic Acid
Synthetase Complexed With Cmp-Kdo At 100k
Length = 245
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 88/242 (36%), Positives = 142/242 (58%), Gaps = 5/242 (2%)
Query: 48 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQ 107
S+ V +IPAR+ SSR GKPL++I+GKPMIQ +ER+ + + VATDD ++ + Q
Sbjct: 1 SKAVIVIPARYGSSRLPGKPLLDIVGKPMIQHVYERALQVAGVAEVWVATDDPRVEQAVQ 60
Query: 108 QFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
FG IMT +GT+R E + K+E DI +N+QGDEP+I P ++ +++ ++ P
Sbjct: 61 AFGGKAIMTRNDHESGTDRLVEVMHKVEA--DIYINLQGDEPMIRPRDVETLLQGMRDDP 118
Query: 168 DAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+T ++ +A +P+ VK VV+ A+YFSR IPY ++ + + YL H+GI
Sbjct: 119 ALPVATLCHAISAAEAAEPSTVKVVVNTRQDALYFSRSPIPYPRNAE---KARYLKHVGI 175
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
+Y + L+ Y L + + E LEQL+++ G ++ +V GVD P +EK+ +
Sbjct: 176 YAYRRDVLQNYSQLPESMPEQAESLEQLRLMNAGINIRTFEVAATGPGVDTPACLEKVRA 235
Query: 288 FM 289
M
Sbjct: 236 LM 237
>gi|432794176|ref|ZP_20028258.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE78]
gi|432795677|ref|ZP_20029737.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE79]
gi|431338246|gb|ELG25333.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE78]
gi|431350743|gb|ELG37554.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE79]
Length = 246
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 88/242 (36%), Positives = 143/242 (59%), Gaps = 5/242 (2%)
Query: 48 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQ 107
S+ V +IPAR+ SSR GKPL++I+GK MIQ +ER+ + + VATDD+++ + Q
Sbjct: 2 SKAVIVIPARYGSSRLPGKPLLDIVGKSMIQHVYERALQVAGVAEVWVATDDQRVEKAVQ 61
Query: 108 QFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
FG IMT +GT+R E + K+E DI +N+QGDEP+I P ++ +++ ++ P
Sbjct: 62 AFGGKAIMTRNDHESGTDRLVEVMHKVEA--DIYINLQGDEPMIRPRDVETLLQGMRDDP 119
Query: 168 DAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+T ++ E+A +P+ VK VV+ A+YFSR IPY ++ + + YL H+GI
Sbjct: 120 ALPVATLCHAISAEEAAEPSTVKVVVNTRQDALYFSRSPIPYPRNAE---KARYLKHVGI 176
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
+Y + L+ Y L + + E LEQL+++ G ++ +V GVD P +EK+ +
Sbjct: 177 YAYRRDVLQNYSQLPESMPEQAESLEQLRLMSAGINIRTFEVAATGPGVDTPACLEKVRA 236
Query: 288 FM 289
M
Sbjct: 237 LM 238
>gi|421492380|ref|ZP_15939741.1| KDSB [Morganella morganii subsp. morganii KT]
gi|455738693|ref|YP_007504959.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Morganella
morganii subsp. morganii KT]
gi|400193536|gb|EJO26671.1| KDSB [Morganella morganii subsp. morganii KT]
gi|455420256|gb|AGG30586.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Morganella
morganii subsp. morganii KT]
Length = 249
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 97/246 (39%), Positives = 141/246 (57%), Gaps = 7/246 (2%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR+AS+R GKPL +I GKPMI R E++K + ++VATD + + + G +
Sbjct: 5 IIPARYASTRLPGKPLADICGKPMIVRVMEQAKRSGAA-RVIVATDTQAVFDAVIAEGGE 63
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
MT E ++GTER E + D I+VN+QGDEPLI II V + L A+ +
Sbjct: 64 ACMTREDHQSGTERLAEVIDHYRFADDEIIVNVQGDEPLIPDSIIAQVAENLAASEAGMA 123
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP----YLLHLGI 227
+ AV E+AF+PN VK V+D GYA+YFSR IP+++ ++ + +L H+GI
Sbjct: 124 TLAVKITSAEEAFNPNAVKVVMDKQGYALYFSRATIPWDRERFMHSRDSAGDNFLRHIGI 183
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHE-AHGVDAPEDVEKIE 286
+Y + F++ Y +PL+ E LEQL+VL G K+ V + GVD PED+E +
Sbjct: 184 YAYRAGFIRRYIQWETSPLEKIEMLEQLRVLWYGEKIHVAEASEAPGTGVDTPEDLETVR 243
Query: 287 SFMRER 292
R
Sbjct: 244 RLFAAR 249
>gi|372276220|ref|ZP_09512256.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pantoea sp.
SL1_M5]
gi|390433359|ref|ZP_10221897.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pantoea
agglomerans IG1]
Length = 249
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 94/245 (38%), Positives = 146/245 (59%), Gaps = 7/245 (2%)
Query: 52 GIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGA 111
IIPAR+AS+R GKPL++I GKPM+ ER++ + ++VATD +A+ + G
Sbjct: 5 AIIPARYASTRLPGKPLLDIHGKPMVVHVMERAR-ESGASRVIVATDHPDVAQAVEAAGG 63
Query: 112 DVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAV 170
+V MT ++GTER E ++K + D I+VN+QGDEP+I EI+ V L + +
Sbjct: 64 EVCMTRADHQSGTERLAEVIEKYQFADDEIIVNVQGDEPMIPAEIVRQVATNLAGSAAGM 123
Query: 171 FSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK----SGKVNPQFPYLLHLG 226
+ AV E+AF+PN VK V+D +GYA+YFSR IP+++ + + L H+G
Sbjct: 124 ATLAVPITDVEEAFNPNAVKVVMDVNGYALYFSRATIPWDRERYAASREQIGDTLLRHIG 183
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKI 285
I +Y + F++ Y P PL+ E LEQL+VL G K+ V + + GVD P+D++++
Sbjct: 184 IYAYRAGFIRRYVAWAPCPLEQIELLEQLRVLWYGEKIHVAVAKTIPSVGVDTPDDLQRV 243
Query: 286 ESFMR 290
M+
Sbjct: 244 RDAMQ 248
>gi|300931825|ref|ZP_07147122.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 187-1]
gi|300460248|gb|EFK23741.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
MS 187-1]
Length = 246
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 88/242 (36%), Positives = 142/242 (58%), Gaps = 5/242 (2%)
Query: 48 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQ 107
S+ V +IPAR+ SSR GKPL++I+GKPMIQ +ER+ + + VATDD ++ + Q
Sbjct: 2 SKAVIVIPARYGSSRLPGKPLLDIVGKPMIQHVYERALQVAGVAEVWVATDDPRVEKAVQ 61
Query: 108 QFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
FG IMT +GT+R E + +E DI +N+QGDEP+I P ++ +++ ++ P
Sbjct: 62 AFGGKAIMTRNDHESGTDRLVEVMHTVEA--DIYINLQGDEPMIRPRDVETLLQGMRDDP 119
Query: 168 DAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+T ++ E+A +P+ VK VV+ A+YFSR IPY ++ + + YL H+GI
Sbjct: 120 ALPVATLCHAISAEEAAEPSTVKVVVNTRQDALYFSRSPIPYPRNAE---KARYLKHVGI 176
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
+Y + L+ Y L + + E LEQL+++ G ++ +V GVD P +EK+ +
Sbjct: 177 YAYRRDVLQNYSQLPESMPEQAESLEQLRLMSAGINIRTFEVAATGPGVDTPACLEKVRA 236
Query: 288 FM 289
M
Sbjct: 237 LM 238
>gi|414069405|ref|ZP_11405399.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudoalteromonas
sp. Bsw20308]
gi|410808208|gb|EKS14180.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudoalteromonas
sp. Bsw20308]
Length = 253
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 103/253 (40%), Positives = 158/253 (62%), Gaps = 12/253 (4%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V +IPARFAS+R GKPL +I GKPM+Q +E++ L+ ++VATD +K+ + F
Sbjct: 4 VVVIPARFASTRLPGKPLADICGKPMVQHVYEKACLSGA-SKVIVATDHQKVFDAVSLFT 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKAL--QAAP 167
+DV+MT E ++GTER E + L+ D IVVN+QGDEPL+ PE + V L AP
Sbjct: 63 SDVVMTREDHQSGTERLAEVVDLLKLDNDTIVVNVQGDEPLLAPENVSQVAALLSDSTAP 122
Query: 168 DAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF-----PYL 222
A S A+ + ++ F+PN VK V D + A+YFSR IP++++ ++ P+
Sbjct: 123 MATLSVAIE--ERDEVFNPNAVKVVSDINKNALYFSRASIPFDRNTMMDGSTALNLSPFQ 180
Query: 223 LHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAH-GVDAPED 281
H+GI +Y + F+K Y L +PL+L E LEQL+VL +GYK+K+ + H GVD P+D
Sbjct: 181 RHVGIYAYRAGFIKQYIELSVSPLELLESLEQLRVLYHGYKIKIEQAQIAPHAGVDTPDD 240
Query: 282 VEKIESFMRERNL 294
+ K+ + ++ +N+
Sbjct: 241 LAKVIAHIKSKNV 253
>gi|336450561|ref|ZP_08621008.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Idiomarina sp.
A28L]
gi|336282384|gb|EGN75616.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Idiomarina sp.
A28L]
Length = 250
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 100/243 (41%), Positives = 144/243 (59%), Gaps = 13/243 (5%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ S+R GKPL +I GKPMIQ +ER+ L + ++VATDD++I + ++FG
Sbjct: 6 VIPARYDSTRLPGKPLADIHGKPMIQHVYERA-LNSGAAEVIVATDDDRIMKVVKEFGGR 64
Query: 113 VIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V+ TS ++GTER E + +L +VVN+QGDEP I PEII V + L + A
Sbjct: 65 VMRTSVEHQSGTERLAEVVDRLALSDEQVVVNVQGDEPFIPPEIICQVAENLASQRHAPM 124
Query: 172 ST-AVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP--------YL 222
+T AV E+ F+PN VK V D YA+YFSR IP+++ + N Y
Sbjct: 125 ATLAVPLTGSEELFNPNVVKVVSDAKNYALYFSRAAIPWDRE-RFNQNRDQVELLGNLYR 183
Query: 223 LHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHE-AHGVDAPED 281
H+GI +Y + F+ Y P+PL+L E LEQL+VL G ++ V + E G+D PED
Sbjct: 184 RHIGIYAYRAGFVARYAEWEPSPLELVESLEQLRVLWYGERIHVAEAIIEPPGGIDTPED 243
Query: 282 VEK 284
+E+
Sbjct: 244 LER 246
>gi|427804074|ref|ZP_18971141.1| CTP:CMP-3-deoxy-D-manno-octulosonate transferase [Escherichia coli
chi7122]
gi|412962256|emb|CCK46170.1| CTP:CMP-3-deoxy-D-manno-octulosonate transferase [Escherichia coli
chi7122]
Length = 247
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 103/247 (41%), Positives = 143/247 (57%), Gaps = 10/247 (4%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPAR+AS+R GKPLV+I GKPMI ER++ + + ++VATD E +A + G
Sbjct: 4 VVIIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGAERIIVATDHEDVARAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT + TER E ++K D ++VN+QGDEP+I II V L
Sbjct: 63 GEVCMT-RADHQSTERLAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVG 121
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK----SGKVNPQFPYLLHL 225
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ G +L HL
Sbjct: 122 MATLAVPIRNAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAEGLETVGDNFLRHL 181
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHE--AHGVDAPEDVE 283
GI Y + F++ Y +PL+ E LEQL+VL G K+ V V HE GVD PED+E
Sbjct: 182 GIYGYRAGFIRRYVNWQASPLEHIEMLEQLRVLWYGEKIHV-AVAHEVPGTGVDTPEDLE 240
Query: 284 KIESFMR 290
++ + MR
Sbjct: 241 RVRAEMR 247
>gi|94314653|ref|YP_587862.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Cupriavidus
metallidurans CH34]
gi|93358505|gb|ABF12593.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Cupriavidus
metallidurans CH34]
Length = 247
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 91/241 (37%), Positives = 141/241 (58%), Gaps = 7/241 (2%)
Query: 50 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQF 109
VV +IPAR+ S+R GKPL++I GKPMIQ +ER++L ++ +VVATDD +I F
Sbjct: 9 VVIVIPARYGSTRLPGKPLLDIAGKPMIQHVYERARLVRGVNAVVVATDDSRIESAVLAF 68
Query: 110 GADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
G +MTS ++GT+R E ++ + D+ +N+QGDEPL+ P I+ + + A P +
Sbjct: 69 GGSCLMTSAGHQSGTDRLCEVMRMVHA--DLYINLQGDEPLVRPTDIELLANLMIADPTS 126
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQS 229
T E+A D N VK V+ N G A+YFSR LIPY + G Y H G+ +
Sbjct: 127 DVGTLCHEFSLEEARDENAVKVVMSNEGDALYFSRSLIPYPRDGAFA---RYYKHSGVYA 183
Query: 230 YDSNFLKIYPGLHPTPL-QLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESF 288
+ L++Y G P P+ + E LEQL++L G+++++ V GVD P +E++ +
Sbjct: 184 FRRRVLEVY-GSMPQPMAEQAERLEQLRLLAAGFRIRMQVVPPIGTGVDTPACLERVRAI 242
Query: 289 M 289
+
Sbjct: 243 L 243
>gi|432707293|ref|ZP_19942370.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE6]
gi|431255721|gb|ELF48799.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE6]
Length = 246
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 88/242 (36%), Positives = 142/242 (58%), Gaps = 5/242 (2%)
Query: 48 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQ 107
S+ V +IPAR+ SSR GKPL++I+GKPMIQ +ER+ + + VATDD ++ + Q
Sbjct: 2 SKAVIVIPARYGSSRLPGKPLLDIVGKPMIQHVYERALQVAGVAEVWVATDDPRVEQAVQ 61
Query: 108 QFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
FG IMT +GT+R E + K+E DI +N+QGDEP+I P ++ +++ ++ P
Sbjct: 62 AFGGKAIMTRNDHESGTDRLVEVMHKVEA--DIYINLQGDEPMIRPRDVETLLQGIRDDP 119
Query: 168 DAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+T ++ +A +P+ VK VV+ A+YFSR IPY ++ + + YL H+GI
Sbjct: 120 ALPVATLCHAISAAEAAEPSTVKVVVNTRQDALYFSRSPIPYPRNAE---KARYLKHVGI 176
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
+Y + L+ Y L + + E LEQL+++ G ++ +V GVD P +EK+ +
Sbjct: 177 YAYRRDVLQNYSQLPESMPEQAESLEQLRLMNAGINIRTFEVAATGPGVDTPACLEKVRA 236
Query: 288 FM 289
M
Sbjct: 237 LM 238
>gi|386744756|ref|YP_006217935.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Providencia
stuartii MRSN 2154]
gi|384481449|gb|AFH95244.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Providencia
stuartii MRSN 2154]
Length = 247
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 98/239 (41%), Positives = 140/239 (58%), Gaps = 7/239 (2%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR+AS+R GKPL +I GKPM+ R E++ + + +VVATD +A Q G +
Sbjct: 5 IIPARYASTRLPGKPLADIHGKPMVVRVMEQA-IKSGASRVVVATDHPDVANAVIQAGGE 63
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
MT + ++GTER E + D I+VN+QGDEPLI PEII V + LQ + +
Sbjct: 64 ACMTDPNHQSGTERLAEVIDTYGFADDEIIVNVQGDEPLIPPEIISQVARNLQGSQAQMG 123
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP----YLLHLGI 227
+ AV ++AF+PN VK V D+ GYA+YFSR IP+++ Q +L H+GI
Sbjct: 124 TLAVPIHDAQEAFNPNAVKVVTDHEGYALYFSRATIPWDRDKFAVSQNAIGDHFLRHIGI 183
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHE-AHGVDAPEDVEKI 285
+Y + F++ Y +PL+ E LEQL+VL G K+ V + GVD PED+E +
Sbjct: 184 YAYRAGFIRRYIKWEASPLEKIEMLEQLRVLWYGEKIHVAVAEKAPGAGVDTPEDLELV 242
>gi|440757661|ref|ZP_20936844.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pantoea
agglomerans 299R]
gi|436428650|gb|ELP26304.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pantoea
agglomerans 299R]
Length = 249
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 94/245 (38%), Positives = 146/245 (59%), Gaps = 7/245 (2%)
Query: 52 GIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGA 111
IIPAR+AS+R GKPL++I GKPM+ ER++ + ++VATD +A+ + G
Sbjct: 5 AIIPARYASTRLPGKPLLDIHGKPMVVHVMERAR-ESGASRVIVATDHPDVAKAVEAAGG 63
Query: 112 DVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAV 170
+V MT ++GTER E ++K + D I+VN+QGDEP+I EI+ V L + +
Sbjct: 64 EVCMTRADHQSGTERLAEVIEKYQFADDEIIVNVQGDEPMIPAEIVRQVATNLAGSAAGM 123
Query: 171 FSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK----SGKVNPQFPYLLHLG 226
+ AV E+AF+PN VK V+D +GYA+YFSR IP+++ + + L H+G
Sbjct: 124 ATLAVPITDAEEAFNPNAVKVVMDVNGYALYFSRATIPWDRERYAASREQIGDTLLRHIG 183
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKI 285
I +Y + F++ Y P PL+ E LEQL+VL G K+ V + + GVD P+D++++
Sbjct: 184 IYAYRAGFIRRYVAWAPCPLEQIELLEQLRVLWYGEKIHVAVAKTIPSVGVDTPDDLQRV 243
Query: 286 ESFMR 290
M+
Sbjct: 244 RIAMQ 248
>gi|237749561|ref|ZP_04580041.1| CTP:CMP-3-deoxy-D-manno-octulosonate transferase [Oxalobacter
formigenes OXCC13]
gi|229380923|gb|EEO31014.1| CTP:CMP-3-deoxy-D-manno-octulosonate transferase [Oxalobacter
formigenes OXCC13]
Length = 250
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 93/242 (38%), Positives = 144/242 (59%), Gaps = 12/242 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR AS+R KPL +I GKPM+ R E++ LA D ++VATDD+ I + C++
Sbjct: 8 VIPARLASTRLPNKPLADIGGKPMVVRVAEKAALAGAKD-IIVATDDQSIVDACEKQAVK 66
Query: 113 VIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
++T + +GT+R E K+ D+VVN+QGDEPLI+PE+I A + +
Sbjct: 67 AVLTRKDHVSGTDRIAEVSAKMNWSATDVVVNVQGDEPLIDPELISAT--AALVSENVPM 124
Query: 172 STAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ------FPYLLH 224
+TA + +P++ F+PN VK V+D A+YFSR IP+ + G P F L H
Sbjct: 125 ATAAHRMEQPDEIFNPNFVKVVLDRFNKALYFSRAAIPWYRDGYSKPDKTFPNPFNALRH 184
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVE 283
+G+ ++ ++FL+ Y L +P++ E LEQL+VL +GY + V + GVD PED+E
Sbjct: 185 IGLYAFRNDFLQTYSSLSISPIEQIESLEQLRVLWHGYPIAVHVTEKIPEAGVDTPEDLE 244
Query: 284 KI 285
++
Sbjct: 245 RV 246
>gi|229591205|ref|YP_002873324.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
fluorescens SBW25]
gi|259494415|sp|C3JY27.1|KDSB_PSEFS RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|229363071|emb|CAY50056.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
fluorescens SBW25]
Length = 254
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 99/246 (40%), Positives = 143/246 (58%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IP+R+AS+R GKPL I KPMIQ WE++ ++ + +VVATDD +I E CQ FGA+
Sbjct: 8 VIPSRYASTRLPGKPLQLIGDKPMIQLVWEQA-CKSSAERVVVATDDPRIIEACQGFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
++T E +GT+R E KL D IVVN+QGDEPLI P +ID V L A +A
Sbjct: 67 AVLTREDHNSGTDRLAEVATKLGLAPDAIVVNVQGDEPLIPPSVIDQVAANLAAHGEARM 126
Query: 172 STAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSG-----KVNPQ-FPYLLH 224
+T ++ F+PN VK V D +G A+ FSR +P+ + V P+ PY H
Sbjct: 127 ATLAEPIEDIATLFNPNVVKVVSDINGLALTFSRSTLPWARDAFAKQPDVLPEGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVE 283
+GI +Y + FL + P L+ E LEQL+ L +G ++ V ++ GVD PED+E
Sbjct: 187 IGIYAYRAGFLHDFVSWGPCWLENTESLEQLRALWHGVRIHVGDALEAPPAGVDTPEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|271500777|ref|YP_003333802.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Dickeya dadantii
Ech586]
gi|270344332|gb|ACZ77097.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Dickeya dadantii
Ech586]
Length = 250
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 98/244 (40%), Positives = 140/244 (57%), Gaps = 7/244 (2%)
Query: 52 GIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGA 111
IIPAR+AS+R GKPL +I GKPM+ ER++ + +VVATD +A + G
Sbjct: 5 AIIPARYASTRLPGKPLADIHGKPMVIHVMERAR-ESGASRVVVATDHADVARAIELAGG 63
Query: 112 DVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAV 170
+V +TS +GTER E + + D I+VN+QGDEPLI P II V L + +
Sbjct: 64 EVCLTSPDHNSGTERLAEVIDRYGFADDEIIVNVQGDEPLIPPVIIRQVADNLAGSRAGM 123
Query: 171 FSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP----YLLHLG 226
+ AV E+AF+PN VK V D GYA+YFSR IP+ + Q +L H+G
Sbjct: 124 ATLAVPITTCEEAFNPNAVKVVTDAEGYALYFSRATIPWERDRFAESQETIGDHFLRHIG 183
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKI 285
I +Y + F++ Y G P+ L+ E LEQL+VL G K+ V + + + GVD PED+ ++
Sbjct: 184 IYAYRAGFIRRYVGWAPSQLEKIEMLEQLRVLWYGEKIHVAVAKEVPSVGVDTPEDLARV 243
Query: 286 ESFM 289
+ M
Sbjct: 244 RAVM 247
>gi|295096381|emb|CBK85471.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Enterobacter
cloacae subsp. cloacae NCTC 9394]
Length = 248
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 99/246 (40%), Positives = 141/246 (57%), Gaps = 7/246 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPAR+AS+R GKPLV+I GKPMI ER++ + ++VATD +A + G
Sbjct: 4 VVIIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGAGRVIVATDHPDVARAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K ++VN+QGDEP+I II V L
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCGFSDETVIVNVQGDEPMIPAAIIRQVADNLAQRQVG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK----SGKVNPQFPYLLHL 225
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ K +L H+
Sbjct: 123 MATLAVPIHHAEEAFNPNAVKVVMDAEGYALYFSRATIPWDRDRFAQSKETIGETFLRHI 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI Y + F++ Y P+PL+ E LEQL+VL G K+ V + + GVD PED+E+
Sbjct: 183 GIYGYRAGFIRRYVAWAPSPLEHIEMLEQLRVLWYGEKIHVAVAQEIPGTGVDTPEDLER 242
Query: 285 IESFMR 290
+ MR
Sbjct: 243 VRVEMR 248
>gi|384155899|ref|YP_005538714.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Arcobacter
butzleri ED-1]
gi|345469453|dbj|BAK70904.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Arcobacter
butzleri ED-1]
Length = 243
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 95/246 (38%), Positives = 145/246 (58%), Gaps = 11/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR SSRF K +V+ILG PM+ +T +K + LD +V+ATD ++ + Q+G D
Sbjct: 3 IIPARLNSSRFANKIMVDILGLPMVIKT---AKQVSNLDKVVIATDSLEVIDLASQYGFD 59
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
++TS + +GT+R NEA+ L D I+VN+Q DEP IEPE++ V+ ++ D+
Sbjct: 60 AVLTSTAHNSGTDRINEAVNILNLSEDEIIVNVQADEPFIEPEVVQAVINRVKQIKDSNE 119
Query: 172 STAVTS----LKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+TS + E A DPN VK ++D AIYFSR IPY++ + Y HLGI
Sbjct: 120 DIMITSCFKEITSELADDPNHVKVILDELSNAIYFSRAKIPYHRDH--HKDASYFGHLGI 177
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEK-IE 286
+ L + L+ + L+ E LEQL+ ++NG K+ ++KV ++ G+D ED+ + I+
Sbjct: 178 YGFTKKSLNDFCKLNSSKLENIEKLEQLRAIDNGKKIAMVKVTSKSFGIDTQEDLNRAIK 237
Query: 287 SFMRER 292
F ER
Sbjct: 238 LFSNER 243
>gi|422317755|ref|ZP_16399054.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Achromobacter
xylosoxidans C54]
gi|317407672|gb|EFV87608.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Achromobacter
xylosoxidans C54]
Length = 254
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 98/251 (39%), Positives = 139/251 (55%), Gaps = 10/251 (3%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
+ +IPAR AS+R KPL +I GKPM+ RT ER+ + + VATDD ++ + Q G
Sbjct: 4 IALIPARAASTRLPDKPLADIAGKPMVVRTAERAAQSGAA-QVYVATDDARVQQAAQAHG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+MT GT+R EA+++L D IVVN+QGDEPLIEPE+ID V L +P A
Sbjct: 63 VRALMTRGDHLTGTDRLAEAVEQLGLPDDAIVVNVQGDEPLIEPELIDAVAARLADSPQA 122
Query: 170 VFSTAVTSLKPEDA-FDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ------FPYL 222
+T L A F+PN VK V G A+YFSR IP+ + + P
Sbjct: 123 DIATCACPLADAQALFNPNVVKLVCATDGRALYFSRAPIPWARDALAGGERVLAEGLPAW 182
Query: 223 LHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDH-EAHGVDAPED 281
H+G+ +Y +FL+ +P L L+ E LEQL+ +E+G+ + V + H A GVD P D
Sbjct: 183 HHIGLYAYRVSFLRRFPTLPQGALERFESLEQLRAMEHGHVIVVHQASHPPAAGVDTPAD 242
Query: 282 VEKIESFMRER 292
+E++ R
Sbjct: 243 LERVRLIYSNR 253
>gi|226940032|ref|YP_002795105.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Laribacter
hongkongensis HLHK9]
gi|226714958|gb|ACO74096.1| KdsB [Laribacter hongkongensis HLHK9]
Length = 254
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 96/247 (38%), Positives = 140/247 (56%), Gaps = 10/247 (4%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V +IPAR S+R KPL +I GKPM+ R ER+ L +VVATD I + C G
Sbjct: 6 VVVIPARLKSTRLPDKPLADIAGKPMVVRVAERA-LQCGASRVVVATDHASIVDACAAHG 64
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+ ++T +GT+R E L D +VVN+QGDEPLIEP +ID + L +
Sbjct: 65 VEALLTRADHPSGTDRLAEVADLLALPDDQVVVNVQGDEPLIEPAVIDRLAATLAGSSAP 124
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSG------KVNPQFPYLL 223
+ + A +D F+PN VK V+D HG A+YFSR +P+ + + P L
Sbjct: 125 MATVAHPVHDADDFFNPNVVKVVLDRHGEALYFSRAPLPWARDAFAARPDVLPPDMAALR 184
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHE-AHGVDAPEDV 282
H+G+ +Y + FL+ Y L +PL+ E LEQL+VL +G+++ V +D A GVD P D+
Sbjct: 185 HVGLYAYRAAFLRQYRSLEASPLESLEALEQLRVLWHGFRIAVTVLDATPAAGVDTPADL 244
Query: 283 EKI-ESF 288
E++ +SF
Sbjct: 245 ERVRQSF 251
>gi|406836567|ref|ZP_11096161.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Schlesneria
paludicola DSM 18645]
Length = 259
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 102/247 (41%), Positives = 144/247 (58%), Gaps = 10/247 (4%)
Query: 50 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQF 109
V GIIPAR S+R K L++ G+ +I+ TWE + AT+L+H+++A D +++A +QF
Sbjct: 3 VYGIIPARLQSTRLPRKLLLSDTGRTVIEYTWEAASRATSLNHVIIAADSDEVATAVKQF 62
Query: 110 GADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
G +T E +GT+R E + DI VNIQGDEP ++PE I+ VVKAL P A
Sbjct: 63 GGHCELTGEH-PSGTDRIAEVAGRCCADGDIFVNIQGDEPEMDPENINAVVKALVDCPTA 121
Query: 170 VFSTAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVN----PQFPYLLH 224
+T T LK E + VK V G A+YFSR IP+ + N + P+LLH
Sbjct: 122 QMATLATPLKSLEQVQASSCVKVVCAKDGRALYFSRCPIPFCRDRDPNEVLVAEQPWLLH 181
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPED--- 281
LGI +Y +FL L P+ L+ E LEQL+ LE G +++V V+H + G+D PED
Sbjct: 182 LGIYAYRRDFLFELTKLPPSRLEQLEKLEQLRALEAGARIQVAIVEHHSVGIDTPEDYAR 241
Query: 282 -VEKIES 287
VE+I S
Sbjct: 242 FVERIRS 248
>gi|400405468|ref|YP_006588327.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [secondary
endosymbiont of Ctenarytaina eucalypti]
gi|400363831|gb|AFP84899.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [secondary
endosymbiont of Ctenarytaina eucalypti]
Length = 251
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 94/247 (38%), Positives = 147/247 (59%), Gaps = 7/247 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
+ IIPARFAS R GKPL +I GKPM+ R ER+K A+ D ++VA D + + ++ G
Sbjct: 4 IAIIPARFASRRLPGKPLADINGKPMVVRVMERAK-ASGADRVIVAADHADVVKAVERAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V +T + + GT+R E + + + D ++VN+QGDEPLI P +I VV+ L + +
Sbjct: 63 GEVCLTRGNYQFGTQRLQEVVDRYDVPDDQVIVNVQGDEPLIPPTLISQVVENLASTDAS 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS----GKVNPQFPYLLHL 225
+ + AV E+AF+ N VK VV + GYA+YFSR IP+N S G+ + L H+
Sbjct: 123 MTTLAVPITTSEEAFNQNAVKVVVSSQGYALYFSRATIPWNHSGFACGRDHLSHFLLRHI 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAH-GVDAPEDVEK 284
G+ +Y ++F++ Y +PL+ E LEQL+VL +G K+ V E+ GVD E + +
Sbjct: 183 GLYAYRADFIRRYVRWSASPLEKIESLEQLRVLWHGEKIHVAMASVESFIGVDTMEALTQ 242
Query: 285 IESFMRE 291
+ ++
Sbjct: 243 VRLLQKQ 249
>gi|253998354|ref|YP_003050417.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Methylovorus
glucosetrophus SIP3-4]
gi|253985033|gb|ACT49890.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Methylovorus
glucosetrophus SIP3-4]
Length = 254
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 98/246 (39%), Positives = 140/246 (56%), Gaps = 8/246 (3%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ASSR KPL++I GKPM+ ER+ L + + ++VATD I + Q +G
Sbjct: 6 VIPARYASSRLPAKPLLDIAGKPMVIWVVERA-LQSGAEQVIVATDHADILQAVQSYGYQ 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
IMT E +GT+R E D IVVN+QGDEPLI+P +I V L+ P+A
Sbjct: 65 AIMTREDHPSGTDRIAEVAAHFGWSDDAIVVNVQGDEPLIDPLLIKEVATNLRDHPEAAM 124
Query: 172 STAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLL----HLG 226
+TA ++ E F+PN VK V D G+A+YFSR IPY + + P + H+G
Sbjct: 125 ATACHAIHDREQIFNPNVVKVVTDKDGHALYFSRAPIPYARDAFQSESSPEEIVAYRHIG 184
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHE-AHGVDAPEDVEKI 285
I +Y +FL Y L L+ E LEQL+ L +GYK+ V + H A GVD P D+ ++
Sbjct: 185 IYAYKVSFLNAYSLLEACSLEKTEMLEQLRALWHGYKISVAETAHAPAAGVDTPADLVRV 244
Query: 286 ESFMRE 291
+++
Sbjct: 245 RMMLKD 250
>gi|268590147|ref|ZP_06124368.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Providencia
rettgeri DSM 1131]
gi|291314422|gb|EFE54875.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Providencia
rettgeri DSM 1131]
Length = 248
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 96/241 (39%), Positives = 142/241 (58%), Gaps = 7/241 (2%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR+AS+R GKPL +I GKPM+ R E++ + + ++VATD +A+ + G +
Sbjct: 5 IIPARYASTRLPGKPLADIHGKPMVVRVMEQA-VKSGASRVIVATDHSDVAKAVIEAGGE 63
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
MT+ + ++GTER E + D I+VN+QGDEPLI PEII V + LQ + +
Sbjct: 64 ACMTNPNHQSGTERLAEVIDTYAFSDDEIIVNVQGDEPLIPPEIISQVARNLQGSKAEMG 123
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNP----QFPYLLHLGI 227
+ AV +AF+PN VK V D+ GYA+YFSR IP+++ + +L H+GI
Sbjct: 124 TLAVPINDAHEAFNPNTVKVVTDHEGYALYFSRATIPWDRDNFAKSHDVIEDTFLRHIGI 183
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKIE 286
+Y + F++ Y +PL+ E LEQL+VL G K+ V + GVD PED+E +
Sbjct: 184 YAYRAGFIRRYIKWEASPLEKIEMLEQLRVLWYGEKIHVDVAKTTPGAGVDTPEDLELVR 243
Query: 287 S 287
S
Sbjct: 244 S 244
>gi|423197307|ref|ZP_17183890.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Aeromonas
hydrophila SSU]
gi|404630995|gb|EKB27631.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Aeromonas
hydrophila SSU]
Length = 250
Score = 167 bits (423), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 100/246 (40%), Positives = 147/246 (59%), Gaps = 8/246 (3%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQ-QF 109
V +IPAR+AS+R GKPL +I GKPM+Q E++ L + D ++VATDDE++ + Q
Sbjct: 4 VVVIPARYASTRLPGKPLADIHGKPMVQHVVEKA-LQSGADRVIVATDDERVQQALAGQT 62
Query: 110 GADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
G +V MTS+ ++GTER E + D IVVN+QGDEPLI P II V L AA
Sbjct: 63 GFEVCMTSKDHQSGTERLAEVCRHYGFAADTIVVNVQGDEPLIPPVIIRQVADNLAAASA 122
Query: 169 AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK----SGKVNPQFPYLLH 224
+ + +V E+AF+PN VK V D GYA+YFSR IP+++ + + Y H
Sbjct: 123 PMATLSVPIRDAEEAFNPNAVKVVTDQEGYALYFSRASIPWDRDRFAASREQIGDHYQRH 182
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIK-VDHEAHGVDAPEDVE 283
+GI +Y + F++ Y P+ L+ E LEQL+VL G K+ V + ++ GVD D++
Sbjct: 183 IGIYAYRAGFIQRYVDWAPSALEQVEALEQLRVLWYGEKIHVAQALEAPPVGVDTQADLD 242
Query: 284 KIESFM 289
K+ + +
Sbjct: 243 KVRALL 248
>gi|157146393|ref|YP_001453712.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Citrobacter koseri
ATCC BAA-895]
gi|166220463|sp|A8AIG3.1|KDSB_CITK8 RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|157083598|gb|ABV13276.1| hypothetical protein CKO_02152 [Citrobacter koseri ATCC BAA-895]
Length = 248
Score = 167 bits (423), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 100/248 (40%), Positives = 144/248 (58%), Gaps = 11/248 (4%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPARF+S+R GKPL++I GKPMI ER++ + + ++VATD E +A + G
Sbjct: 4 VVIIPARFSSTRLPGKPLLDINGKPMIVHVLERAR-ESGAERIIVATDHEDVARAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D ++VN+QGDEP+I II V + L
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCGFSDDTVIVNVQGDEPMIPAVIIRQVAENLAQRQVG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSG------KVNPQFPYLL 223
+ + A E+AF+PN VK V+D GYA+YFSR IP+++ V F L
Sbjct: 123 MATLAAPIHGAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAKSLETVGDTF--LR 180
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDV 282
HLGI Y + F++ Y P+PL+ E LEQL+VL G K+ V + + GVD ED+
Sbjct: 181 HLGIYGYRAGFIRRYVNWQPSPLEHIEMLEQLRVLWYGEKIHVAVAKEVPGTGVDTAEDL 240
Query: 283 EKIESFMR 290
E++ + MR
Sbjct: 241 ERVRAEMR 248
>gi|397689390|ref|YP_006526644.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Melioribacter
roseus P3M]
gi|395810882|gb|AFN73631.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Melioribacter
roseus P3M]
Length = 253
Score = 167 bits (423), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 94/244 (38%), Positives = 139/244 (56%), Gaps = 6/244 (2%)
Query: 50 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQF 109
+VG+IPARFAS+R GKPL +I G PMIQ TW +K + LD +V+A DD+K+ + F
Sbjct: 2 IVGVIPARFASTRLMGKPLADIGGMPMIQHTWMNAKKSKLLDKVVIAVDDDKVYRVVKDF 61
Query: 110 GADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
GA+V MT + +GT+R + L I VNIQGDEP I+ ++ID V+ L +
Sbjct: 62 GAEVYMTPKEVNSGTDRIALVAEHLPNA-SIFVNIQGDEPFIKGKMIDEAVEPLLFDKNV 120
Query: 170 VFSTAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF----PYLLH 224
ST + + E+ P+ VK V D + +A+YFSR IPY + + N + H
Sbjct: 121 EVSTLIRRITTVEEMKSPSVVKVVFDYNNFALYFSRSPIPYVRDARTNLERVEAGEMYKH 180
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEK 284
+G+ Y L + T L+ E LEQL++LE+G K+KV+ +++ VD P+D+E
Sbjct: 181 IGLYVYRKETLLKFTSWKQTDLERIEKLEQLRMLEHGIKIKVVLTQYDSLSVDTPKDLEI 240
Query: 285 IESF 288
F
Sbjct: 241 ARRF 244
>gi|419957623|ref|ZP_14473689.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Enterobacter
cloacae subsp. cloacae GS1]
gi|388607781|gb|EIM36985.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Enterobacter
cloacae subsp. cloacae GS1]
Length = 248
Score = 167 bits (423), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 99/246 (40%), Positives = 141/246 (57%), Gaps = 7/246 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPAR+AS+R GKPLV+I GKPMI ER++ + ++VATD +A + G
Sbjct: 4 VVIIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGAGRVIVATDHPDVARAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K ++VN+QGDEP+I II V L
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCGFSDETVIVNVQGDEPMIPAAIIRQVADNLARRQVG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK----SGKVNPQFPYLLHL 225
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ K +L H+
Sbjct: 123 MATLAVPIHHAEEAFNPNAVKVVMDAEGYALYFSRATIPWDRDRFAQSKETIGETFLRHI 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI Y + F++ Y P+PL+ E LEQL+VL G K+ V + + GVD PED+E+
Sbjct: 183 GIYGYRAGFIRRYVAWAPSPLEHIEMLEQLRVLWYGEKIHVAVAQEIPGTGVDTPEDLER 242
Query: 285 IESFMR 290
+ MR
Sbjct: 243 VRVEMR 248
>gi|407802213|ref|ZP_11149055.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Alcanivorax sp.
W11-5]
gi|407023888|gb|EKE35633.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Alcanivorax sp.
W11-5]
Length = 255
Score = 167 bits (422), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 98/247 (39%), Positives = 137/247 (55%), Gaps = 11/247 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPARF +SR GKPL +I GKPM+ ER L + D + VATDDE++AE + G D
Sbjct: 6 VIPARFGASRLPGKPLADIGGKPMVLHVRERC-LDSGADEVWVATDDERVAEAVRAQGGD 64
Query: 113 VIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V+MT +GT+R E +L DI+VN+QGDEPLI P +ID V L A P
Sbjct: 65 VLMTRADHPSGTDRLQEVAAQLRLTDDDILVNVQGDEPLIPPAVIDQVAANLAAHPGFGI 124
Query: 172 STAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVN-------PQFPYLL 223
+T + ED F+PN VK V D HG A+YFSR +P+++ G P +
Sbjct: 125 ATLCEPITTSEDLFNPNIVKTVFDVHGRALYFSRAPMPWHRDGFAGGDQPDPLPAGQWWR 184
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEA-HGVDAPEDV 282
H+GI +Y + L Y G P PL+ E LEQL+ + +G + V + GVD D+
Sbjct: 185 HIGIYAYRVSLLNRYVGWEPAPLERIESLEQLRAMYHGVPVHVQPACEDVPGGVDTQADL 244
Query: 283 EKIESFM 289
E++ + +
Sbjct: 245 ERMRALL 251
>gi|334122611|ref|ZP_08496648.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Enterobacter
hormaechei ATCC 49162]
gi|333391970|gb|EGK63078.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Enterobacter
hormaechei ATCC 49162]
Length = 248
Score = 167 bits (422), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 99/246 (40%), Positives = 140/246 (56%), Gaps = 7/246 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPAR+AS+R GKPLV+I GKPMI ER++ + ++VATD +A + G
Sbjct: 4 VVIIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGAGRVIVATDHPDVARAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K ++VN+QGDEP+I II V L
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCGFSDETVIVNVQGDEPMIPAAIIRQVADNLAQRQVG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK----SGKVNPQFPYLLHL 225
+ + AV E+AF+PN VK V D GYA+YFSR IP+++ K +L H+
Sbjct: 123 MATLAVPIHHAEEAFNPNAVKVVTDAEGYALYFSRATIPWDRDRFAQSKETIGETFLRHI 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI Y + F++ Y P+PL+ E LEQL+VL G K+ V + + GVD PED+E+
Sbjct: 183 GIYGYRAGFIRRYVAWSPSPLEHIEMLEQLRVLWYGEKIHVAVAREIPGTGVDTPEDLER 242
Query: 285 IESFMR 290
+ MR
Sbjct: 243 VRVEMR 248
>gi|238795859|ref|ZP_04639372.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Yersinia
mollaretii ATCC 43969]
gi|238720322|gb|EEQ12125.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Yersinia
mollaretii ATCC 43969]
Length = 250
Score = 167 bits (422), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 96/245 (39%), Positives = 144/245 (58%), Gaps = 7/245 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
+ IIPAR+AS+R GKPL +I GKPM+ ER+ LA+ ++VATD ++ + + G
Sbjct: 4 IAIIPARYASTRLPGKPLADIAGKPMVVHVMERA-LASGASRVIVATDHPEVVKAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V +T ++GTER E +++ + DI+VN+QGDEPLI P II V L A
Sbjct: 63 GEVCLTRADHQSGTERLAEVIERYDFADDDIIVNVQGDEPLIPPVIIRQVADNLAACSAG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK----SGKVNPQFPYLLHL 225
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ K +L H+
Sbjct: 123 MATLAVPIESSEEAFNPNAVKVVMDAQGYALYFSRAAIPWDRERFAQSKETIGDCFLRHI 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI +Y + F++ Y P+ L+ E LEQL+VL G K+ V + GVD ED+++
Sbjct: 183 GIYAYRAGFIRRYVNWAPSKLEQIELLEQLRVLWYGEKIHVAVAKAVPTVGVDTQEDLDR 242
Query: 285 IESFM 289
+ + M
Sbjct: 243 VRAVM 247
>gi|395494526|ref|ZP_10426105.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas sp.
PAMC 25886]
Length = 254
Score = 167 bits (422), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 99/246 (40%), Positives = 144/246 (58%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IP+R+AS+R GKPL I KPMIQ WE++ ++ + +VVATDD +I E C++FGA+
Sbjct: 8 VIPSRYASTRLPGKPLQLIGDKPMIQLVWEQA-CKSSAERVVVATDDPRIIEACKRFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
++T E +GT+R E KL D IVVN+QGDEPLI P +ID V L A +A
Sbjct: 67 AVLTREDHNSGTDRLAEVATKLGLAADAIVVNVQGDEPLIPPCVIDQVAANLAAHGEARM 126
Query: 172 STAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSG-----KVNPQ-FPYLLH 224
+T ++ E F+PN VK V D +G A+ FSR +P+ + V P PY H
Sbjct: 127 ATLAEPIEDIETLFNPNVVKVVSDINGLALTFSRSTLPWARDAFAKEPDVLPAGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVE 283
+GI +Y + FL + P L+ E LEQL+ L +G ++ V ++ GVD PED+E
Sbjct: 187 IGIYAYRAGFLHDFVSWGPCWLENTESLEQLRALWHGVRIHVGDALEAPPAGVDTPEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|386825073|ref|ZP_10112200.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Serratia
plymuthica PRI-2C]
gi|386377930|gb|EIJ18740.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Serratia
plymuthica PRI-2C]
Length = 249
Score = 167 bits (422), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 97/246 (39%), Positives = 145/246 (58%), Gaps = 7/246 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
+ IIPAR+AS+R GKPL +I GKPM+ ER++ + ++VATD ++AE + G
Sbjct: 4 IAIIPARYASTRLPGKPLADIHGKPMVVHVMERAR-ESGASRVIVATDHPEVAEAVKAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MTS +GTER E ++ D I+VN+QGDEPLI P I+ V + L A+
Sbjct: 63 GEVCMTSPHHHSGTERLAEVIEHYGFADDEIIVNVQGDEPLIPPVIVRQVAENLAASQAG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK----SGKVNPQFPYLLHL 225
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ K + L H+
Sbjct: 123 MATLAVPIDSAEEAFNPNAVKVVMDAQGYALYFSRATIPWDRERFAQSKESIGDSLLRHI 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI +Y + F++ Y P+ L+ E LEQL+VL G K+ V + GVD PED+++
Sbjct: 183 GIYAYRAGFVRRYVSWAPSQLEQIELLEQLRVLWYGEKIHVAVAKAIPTVGVDTPEDLQR 242
Query: 285 IESFMR 290
+ ++
Sbjct: 243 VRDSIK 248
>gi|261344283|ref|ZP_05971927.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Providencia
rustigianii DSM 4541]
gi|282567886|gb|EFB73421.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Providencia
rustigianii DSM 4541]
Length = 248
Score = 167 bits (422), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 96/237 (40%), Positives = 141/237 (59%), Gaps = 7/237 (2%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR++S+R GKPL +I GKPM+ R E++ + + +++ATD +A+ + G +
Sbjct: 5 IIPARYSSTRLPGKPLADIHGKPMVVRVMEQA-IKSGASRVIIATDHPDVAKAVIKAGGE 63
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
MT+ ++GTER E + D I+VN+QGDEPLI PEII V + LQ + +
Sbjct: 64 ACMTNPDHQSGTERLAEVIDTYGFADDEIIVNVQGDEPLIPPEIIRQVAQNLQGSKANMG 123
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS----GKVNPQFPYLLHLGI 227
+ AV ++AF+PN VK V+D GYA+YFSR IP+N+ K +L H+GI
Sbjct: 124 TLAVPIHDAKEAFNPNAVKVVMDKDGYALYFSRATIPWNRDQFAVSKETIGDTFLRHIGI 183
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHE-AHGVDAPEDVE 283
+Y + F++ Y G +PL+ E LEQL+VL G K+ V + GVD PED+E
Sbjct: 184 YAYRAGFIRRYIGWEASPLEKIEMLEQLRVLWYGEKIHVAVAEKAPGAGVDTPEDLE 240
>gi|145298549|ref|YP_001141390.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Aeromonas
salmonicida subsp. salmonicida A449]
gi|418362721|ref|ZP_12963346.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Aeromonas
salmonicida subsp. salmonicida 01-B526]
gi|226724249|sp|A4SL70.1|KDSB_AERS4 RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|142851321|gb|ABO89642.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Aeromonas
salmonicida subsp. salmonicida A449]
gi|356686032|gb|EHI50644.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Aeromonas
salmonicida subsp. salmonicida 01-B526]
Length = 259
Score = 167 bits (422), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 102/255 (40%), Positives = 148/255 (58%), Gaps = 17/255 (6%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKI----AECC 106
V +IPAR+AS+R GKPL +I GKPM+Q E++ L + D ++VATDDE++ A
Sbjct: 4 VVVIPARYASTRLPGKPLADIHGKPMVQHVVEKA-LQSGADRVIVATDDERVHSALASFA 62
Query: 107 QQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQA 165
+Q G +V MTS+ ++GTER E + D IVVN+QGDEPLI P II V L A
Sbjct: 63 EQAGVEVCMTSQDHQSGTERLAEVCRHYGFSADTIVVNVQGDEPLIPPAIIRQVADNLAA 122
Query: 166 APDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPY--------NKSGKVNP 217
A + + +V E+AF+PN VK V D GYA+YFSR IP+ +++ +
Sbjct: 123 ASAPMATLSVPIQDAEEAFNPNAVKVVTDKEGYALYFSRACIPWDRDRFAASDRAAGSHE 182
Query: 218 QF--PYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIK-VDHEAH 274
Q Y H+GI +Y + F++ Y P+ L+ E LEQL+VL G K+ V + +
Sbjct: 183 QIGDHYQRHIGIYAYRAGFIQRYVDWAPSVLEQVEALEQLRVLWYGEKIHVAQALQAPPV 242
Query: 275 GVDAPEDVEKIESFM 289
GVD D++K+ + +
Sbjct: 243 GVDTQADLDKVRALL 257
>gi|33600991|ref|NP_888551.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bordetella
bronchiseptica RB50]
gi|427815305|ref|ZP_18982369.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bordetella
bronchiseptica 1289]
gi|81580088|sp|Q7WKU7.1|KDSB_BORBR RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|33575426|emb|CAE32503.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bordetella
bronchiseptica RB50]
gi|410566305|emb|CCN23866.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Bordetella
bronchiseptica 1289]
Length = 254
Score = 167 bits (422), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 99/249 (39%), Positives = 136/249 (54%), Gaps = 10/249 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR AS+R KPL +I GKPM+ R ER+ L+ + +++ATDD ++ + G
Sbjct: 6 LIPARLASTRLPDKPLADIAGKPMVVRVAERAALSGA-ERVMIATDDARVQQAAADHGHA 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
I+T GT+R +EA+ L D IVVN+QGDEPLIEP +ID V L AAP A
Sbjct: 65 AILTRPDHPTGTDRLSEAVDALGLPDDAIVVNVQGDEPLIEPALIDAVAAQLVAAPHADI 124
Query: 172 STAVTSLKPEDA-FDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVN------PQFPYLLH 224
+T L +A FDPN VK V A+YFSR IP+ + P P H
Sbjct: 125 ATCACPLADAEALFDPNVVKVVCAADRRALYFSRAPIPWARDALAGGARVLAPGLPAWHH 184
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHE-AHGVDAPEDVE 283
+GI +Y FL+ +P L L+ E LEQL+ +E+G+ + V D A GVD P D+E
Sbjct: 185 IGIYAYRVAFLRRFPALSQGQLERYESLEQLRAMEHGHVIVVHHTDSAPAAGVDTPADLE 244
Query: 284 KIESFMRER 292
+ + R
Sbjct: 245 RARAAYTNR 253
>gi|429081913|ref|ZP_19145008.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Cronobacter
condimenti 1330]
gi|426549479|emb|CCJ71049.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Cronobacter
condimenti 1330]
Length = 245
Score = 167 bits (422), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 142/244 (58%), Gaps = 7/244 (2%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR+AS+R GKPLV+I GKPM+ ER++ + ++VATD +A + G +
Sbjct: 3 IIPARYASTRLPGKPLVDINGKPMVVHVLERAR-ESGAARIIVATDHPDVARAVEAAGGE 61
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MT ++GTER E ++K D ++VN+QGDEP+I P II V + L + +
Sbjct: 62 VCMTRADHQSGTERLAEVVEKCGFADDTVIVNVQGDEPMIPPAIIRQVAENLAGSQAGMA 121
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP----YLLHLGI 227
+ AV +AF+PN VK V+D GYA+YFSR IP+++ + +L H+GI
Sbjct: 122 TLAVPIHDAHEAFNPNAVKVVMDAQGYALYFSRATIPWDRDRFAQSREAIGDTFLRHIGI 181
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVD-HEAHGVDAPEDVEKIE 286
Y + F++ Y +PL+ E LEQL+VL +G K+ V + GVD PED+E++
Sbjct: 182 YGYRAGFIRRYVTWPASPLEQIEMLEQLRVLWHGEKIHVAVAEVVPGTGVDTPEDLERVR 241
Query: 287 SFMR 290
MR
Sbjct: 242 VEMR 245
>gi|302037866|ref|YP_003798188.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Candidatus
Nitrospira defluvii]
gi|300605930|emb|CBK42263.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Candidatus
Nitrospira defluvii]
Length = 263
Score = 167 bits (422), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 92/241 (38%), Positives = 138/241 (57%), Gaps = 6/241 (2%)
Query: 45 NFRSRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAE 104
+ + V +IPAR+ SSRF GKPLV +LGKPMIQ +E+++ +D ++VATDDE+I
Sbjct: 7 DVKRSVTVVIPARYGSSRFPGKPLVELLGKPMIQHVYEQAQACRAVDDVLVATDDERIKT 66
Query: 105 CCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQ 164
Q+FG V+MT+E R GT+R + + D V++QGDE L+ P++I +V+
Sbjct: 67 AVQRFGGQVVMTTEPYRTGTDRVAAVAES--RTGDCFVDLQGDEILLHPDLITDLVEPFL 124
Query: 165 AAPDAVFSTAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP--Y 221
+ DA T + +D +P VK D GYA+YFSR IP + P +
Sbjct: 125 DS-DATMGTLKRQIDSDQDLHNPGVVKVTTDREGYALYFSRAPIPLVRDDPKRAAVPGLH 183
Query: 222 LLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPED 281
+HLG+ Y + L+ L L+ E LEQL+ LENG +++V + H + +D+PED
Sbjct: 184 FIHLGLYIYTRDTLQRLTALPTGTLEEAEKLEQLRALENGMRIRVWETIHGSLRIDSPED 243
Query: 282 V 282
V
Sbjct: 244 V 244
>gi|241663987|ref|YP_002982347.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Ralstonia
pickettii 12D]
gi|240866014|gb|ACS63675.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Ralstonia
pickettii 12D]
Length = 268
Score = 167 bits (422), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 94/256 (36%), Positives = 140/256 (54%), Gaps = 16/256 (6%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
+ +IPAR AS+R KPL +I GKPM+ R ER+ ++ +VVATD +A+ C Q
Sbjct: 7 IAVIPARLASTRLPNKPLADIDGKPMVVRVAERAHQSSAA-RVVVATDAASVADACMQHH 65
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+ ++T +GT+R E L D IVVN+QGDEPLI P +ID V L+ PD
Sbjct: 66 VEAVLTRADHASGTDRLAEVATVLGLPDDAIVVNVQGDEPLIAPTLIDNVAAHLRDHPDC 125
Query: 170 VFSTAVTSLK-PEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK------------SGKVN 216
+TA + P D F+PN VK V+D A+ FSR +P+ + + +
Sbjct: 126 AIATAAHPIHDPADVFNPNVVKVVLDAADRALLFSRAPLPWARDTWTPAVMAQPVAERPL 185
Query: 217 PQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHE-AHG 275
P P L H+GI +Y + FL+ +P L P++ E LEQL+ + +G ++ V+ D A G
Sbjct: 186 PAMPVLRHIGIYAYRAGFLRRFPQLAAAPIEQTEQLEQLRAMWHGERIAVLTTDDAPAAG 245
Query: 276 VDAPEDVEKIESFMRE 291
VD ED+ ++ + E
Sbjct: 246 VDTSEDLARVRAAWAE 261
>gi|422827655|ref|ZP_16875829.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
B093]
gi|371606686|gb|EHN95282.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
B093]
Length = 246
Score = 167 bits (422), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 88/245 (35%), Positives = 144/245 (58%), Gaps = 5/245 (2%)
Query: 48 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQ 107
S+ V +IPAR+ SSR GKPL++I+GKPMIQ +ER+ + + VATDD ++ + Q
Sbjct: 2 SKAVIVIPARYGSSRLPGKPLLDIVGKPMIQHVYERALQVAGVAEVWVATDDPRVEQAVQ 61
Query: 108 QFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
FG IMT +GT+R E + +E DI +N+QGDEP+I P ++ +++ ++ P
Sbjct: 62 AFGGKAIMTRNDHESGTDRLVEVMHTVEA--DIYINLQGDEPMIRPRDVETLLQGMRDDP 119
Query: 168 DAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+T ++ E+A +P+ VK VV+ A+YFSR IPY ++ + + YL H+GI
Sbjct: 120 ALPVATLCHAISAEEAAEPSTVKVVVNTRQDALYFSRSPIPYPRNAE---KARYLKHVGI 176
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
+Y + L+ Y L + + E LEQL+++ G ++ +V GVD P +EK+ +
Sbjct: 177 YAYRRDVLQNYSQLPESMPEQAESLEQLRLMSAGINIRTFEVAATGPGVDTPACLEKVCA 236
Query: 288 FMRER 292
M ++
Sbjct: 237 LMAQK 241
>gi|304397078|ref|ZP_07378957.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pantoea sp. aB]
gi|304355227|gb|EFM19595.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pantoea sp. aB]
Length = 249
Score = 167 bits (422), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 94/245 (38%), Positives = 145/245 (59%), Gaps = 7/245 (2%)
Query: 52 GIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGA 111
IIPAR+AS+R GKPL++I GKPM+ ER++ + ++VATD +A+ + G
Sbjct: 5 AIIPARYASTRLPGKPLLDIHGKPMVVHVMERAR-ESGASRVIVATDHPDVAKAVEAAGG 63
Query: 112 DVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAV 170
+V MT ++GTER E ++K + D I+VN+QGDEP+I EI+ V L + +
Sbjct: 64 EVCMTRADHQSGTERLAEVIEKYQFADDEIIVNVQGDEPMIPAEIVRQVATNLAGSAAGM 123
Query: 171 FSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK----SGKVNPQFPYLLHLG 226
+ AV E+AF+PN VK V+D +GYA+YFSR IP+++ + + L H+G
Sbjct: 124 ATLAVPITDAEEAFNPNAVKVVMDVNGYALYFSRATIPWDRERYAASREQIGDTLLRHIG 183
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKI 285
I +Y + F++ Y P PL+ E LEQL+VL G K+ V + + GVD P D++++
Sbjct: 184 IYAYRAGFIRRYVAWAPCPLEQIELLEQLRVLWYGEKIHVAVAKTIPSVGVDTPNDLQRV 243
Query: 286 ESFMR 290
M+
Sbjct: 244 RIAMQ 248
>gi|313200428|ref|YP_004039086.1| 3-deoxy-d-manno-octulosonate cytidylyltransferase [Methylovorus sp.
MP688]
gi|312439744|gb|ADQ83850.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Methylovorus sp.
MP688]
Length = 254
Score = 167 bits (422), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 98/246 (39%), Positives = 140/246 (56%), Gaps = 8/246 (3%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ASSR KPL++I GKPM+ ER+ L + + ++VATD I + Q +G
Sbjct: 6 VIPARYASSRLPAKPLLDIAGKPMVIWAVERA-LQSGAEQVIVATDHADILQAVQSYGYQ 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
IMT E +GT+R E D IVVN+QGDEPLI+P +I V L+ P+A
Sbjct: 65 AIMTREDHPSGTDRIAEVAAYFGWSDDTIVVNVQGDEPLIDPLLIKEVATNLRDHPEAAM 124
Query: 172 STAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLL----HLG 226
+TA ++ E F+PN VK V D G+A+YFSR IPY + + P + H+G
Sbjct: 125 ATACHAIHDREQIFNPNVVKVVTDKDGHALYFSRAPIPYARDAFQSESSPEEIVAYRHIG 184
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHE-AHGVDAPEDVEKI 285
I +Y +FL Y L L+ E LEQL+ L +GYK+ V + H A GVD P D+ ++
Sbjct: 185 IYAYKVSFLNAYSLLEACSLEKTEMLEQLRALWHGYKISVAETAHAPAAGVDTPADLVRV 244
Query: 286 ESFMRE 291
+++
Sbjct: 245 RMMLKD 250
>gi|411008762|ref|ZP_11385091.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Aeromonas
aquariorum AAK1]
Length = 250
Score = 167 bits (422), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 100/246 (40%), Positives = 147/246 (59%), Gaps = 8/246 (3%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQ-QF 109
V +IPAR+AS+R GKPL +I GKPM+Q E++ L + D ++VATDDE++ + Q
Sbjct: 4 VVVIPARYASTRLPGKPLADIHGKPMVQHVVEKA-LQSGADRVIVATDDERVQQALAGQT 62
Query: 110 GADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
G +V MTS+ ++GTER E + D IVVN+QGDEPLI P II V L AA
Sbjct: 63 GFEVCMTSKDHQSGTERLAEVCRHYGFAADTIVVNVQGDEPLIPPVIIRQVADNLAAASA 122
Query: 169 AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK----SGKVNPQFPYLLH 224
+ + +V E+AF+PN VK V D GYA+YFSR IP+++ + + Y H
Sbjct: 123 PMATLSVPIQDAEEAFNPNAVKVVTDQDGYALYFSRASIPWDRDRFAASREQIGDHYQRH 182
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIK-VDHEAHGVDAPEDVE 283
+GI +Y + F++ Y P+ L+ E LEQL+VL G K+ V + ++ GVD D++
Sbjct: 183 IGIYAYRAGFIQRYVDWAPSALEQVEALEQLRVLWYGEKIHVAQALEAPPVGVDTQADLD 242
Query: 284 KIESFM 289
K+ + +
Sbjct: 243 KVRALL 248
>gi|221066458|ref|ZP_03542563.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Comamonas
testosteroni KF-1]
gi|220711481|gb|EED66849.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Comamonas
testosteroni KF-1]
Length = 258
Score = 167 bits (422), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 97/252 (38%), Positives = 138/252 (54%), Gaps = 16/252 (6%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR +S+R GKPL +I G PM+ R + VVA DDE I C + G
Sbjct: 6 LIPARLSSTRLPGKPLADIAGLPMVVRV-AQRAALAGAARCVVAADDESIVAACARHGVQ 64
Query: 113 VIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
I+T + +G++R EA +L D+VVN+QGDEPLI+P +I+ V + L A P+A
Sbjct: 65 AILTRKDHPSGSDRLAEACAQLGLSGDDVVVNVQGDEPLIDPRLIEAVAQLLLARPEASM 124
Query: 172 STAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS------------GKVNPQ 218
TA + D +PN VK V D G A YFSR IP+++ G +
Sbjct: 125 GTAAHPIDSLTDYRNPNVVKVVCDAKGLASYFSRAPIPFSRDHGDEAWWQTAAPGAGHTG 184
Query: 219 FPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVD 277
F L H+GI SY + FL+ +P L P P + E LEQL+ L +G+++ V I D GVD
Sbjct: 185 FTPLRHIGIYSYKAGFLREFPQLAPAPTEAMEQLEQLRALWHGHRIAVHITPDAPGAGVD 244
Query: 278 APEDVEKIESFM 289
PED+E++ + +
Sbjct: 245 TPEDLERVRAVL 256
>gi|385799167|ref|YP_005835571.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Halanaerobium
praevalens DSM 2228]
gi|309388531|gb|ADO76411.1| 3-deoxy-D-manno-octulosonatecytidylyltransferase [Halanaerobium
praevalens DSM 2228]
Length = 247
Score = 166 bits (421), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 92/245 (37%), Positives = 142/245 (57%), Gaps = 3/245 (1%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+ +IPAR+ S+RF K L I G+ MI R +E K +D + VATDD++I + ++
Sbjct: 5 KTAALIPARYNSTRFPAKALAKISGQAMIVRVYESVKACQLIDQVYVATDDQRIKKAVEK 64
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
G VIMT ++GT+R EA ++E D++VN+QGDEPLI + I ++ P+
Sbjct: 65 AGGQVIMTDAKHQSGTDRIAEAAAEIEA--DLIVNVQGDEPLIRAQDIAPALEVFAQRPE 122
Query: 169 AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQ 228
ST + +A +P+ VK + D + YA+YFSR IPY ++ V + Y H+G+
Sbjct: 123 LKMSTLKRKITAAEAENPDLVKVITDQNDYALYFSRSPIPYYRAETVKNK-NYYQHIGLY 181
Query: 229 SYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESF 288
Y +FL Y + T L+ E LEQL+ LENGY++KVI+ + + GVD ED++ +E
Sbjct: 182 VYRRDFLLKYAKMQQTELEKAESLEQLRALENGYQIKVIETNAKLIGVDRKEDIKLVEKE 241
Query: 289 MRERN 293
+ R
Sbjct: 242 LAARQ 246
>gi|392978374|ref|YP_006476962.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Enterobacter
cloacae subsp. dissolvens SDM]
gi|392324307|gb|AFM59260.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Enterobacter
cloacae subsp. dissolvens SDM]
Length = 248
Score = 166 bits (421), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 96/246 (39%), Positives = 143/246 (58%), Gaps = 7/246 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPAR+AS+R GKPLV+I GKPMI ER++ + D +++ATD +A + G
Sbjct: 4 VVIIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGADRIIIATDHPDVARAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D ++VN+QGDEP+I I+ V L
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEPMIPAVIVRQVADNLAQRQVG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS----GKVNPQFPYLLHL 225
+ + AV ++AF+PN VK V D GYA+YFSR IP+++ + +L H+
Sbjct: 123 MATLAVPIHHADEAFNPNAVKVVTDAEGYALYFSRATIPWDRDRFAVSREAIGDTFLRHI 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI Y + F++ Y P+PL+ E LEQL+VL G K+ V + + GVD PED+E+
Sbjct: 183 GIYGYRAGFIRRYVSWAPSPLEHIEMLEQLRVLWYGEKIHVAVAEEVPGTGVDTPEDLER 242
Query: 285 IESFMR 290
+ + +R
Sbjct: 243 VRAELR 248
>gi|387130240|ref|YP_006293130.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Methylophaga sp.
JAM7]
gi|386271529|gb|AFJ02443.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Methylophaga sp.
JAM7]
Length = 252
Score = 166 bits (421), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 93/249 (37%), Positives = 147/249 (59%), Gaps = 11/249 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+AS+R GKPL I GKPMIQ +ER++ + +++ATDD++IA+ QFG D
Sbjct: 6 VIPARYASTRLPGKPLREIAGKPMIQHVYERAR-ESDASSVIIATDDQRIADVVSQFGGD 64
Query: 113 VIMTSESCRNGTERCNEA--LQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAV 170
+ +T + ++GT+R E L++ + DI+VN+QGDEP + +I+ V L P A
Sbjct: 65 ICLTRANHQSGTDRLAEVVNLRQFDPD-DIIVNVQGDEPCLPAALINQVAHDLAEHPKAA 123
Query: 171 FSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS--GKVNP---QFPYLLH 224
++ + L E FD N VK +VD GYA+YFSR +P+ + G+ P + P+ H
Sbjct: 124 ITSLFSRLSSAEQIFDSNIVKVLVDAQGYALYFSRAPVPWLRGIFGEDKPLPAELPHRRH 183
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEA-HGVDAPEDVE 283
+G+ +Y S++L+ Y P L+ E LEQL+ L +G + + + A HGVD D+
Sbjct: 184 IGLYAYRSSYLQRYTDFSPCDLEQFESLEQLRALYHGNAIHLTEATEAAGHGVDTESDLL 243
Query: 284 KIESFMRER 292
E +R++
Sbjct: 244 IAEQLLRQQ 252
>gi|407365692|ref|ZP_11112224.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
mandelii JR-1]
Length = 254
Score = 166 bits (421), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 101/246 (41%), Positives = 146/246 (59%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IP+R+AS+R GKPL+ I GKPMIQ WE++ ++ + +VVATDD +I E C+ FGA+
Sbjct: 8 VIPSRYASTRLPGKPLLLIAGKPMIQHVWEQAS-KSSAERVVVATDDVRIVEACKAFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V++T E +GT+R E KL D IVVN+QGDEPLI P +ID V L A +A
Sbjct: 67 VVLTREDHNSGTDRLAEVSAKLGLAADAIVVNVQGDEPLIPPSVIDQVAANLAAHAEARM 126
Query: 172 STAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPY-----NKSGKVNPQ-FPYLLH 224
+T ++ E F+PN VK V D +G A+ FSR +P+ KS + P+ PY H
Sbjct: 127 ATLAEPIEDVETLFNPNVVKVVSDLNGLALTFSRATLPWARDAFAKSREQLPEGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDAPEDVE 283
+GI +Y + FL + P L+ E LEQL+ L +G ++ V + GVD ED+E
Sbjct: 187 IGIYAYRAGFLHDFVSWGPCWLENTESLEQLRALWHGVRIHVADALIAPPTGVDTVEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|428207476|ref|YP_007091829.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase
[Chroococcidiopsis thermalis PCC 7203]
gi|428009397|gb|AFY87960.1| 3-deoxy-D-manno-octulosonatecytidylyltransferase [Chroococcidiopsis
thermalis PCC 7203]
Length = 258
Score = 166 bits (421), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 88/246 (35%), Positives = 137/246 (55%), Gaps = 4/246 (1%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+++ +IPAR+ S RF GKPLV I +PM+Q +E + + +VVATD+ IAEC
Sbjct: 2 KILAVIPARYNSQRFPGKPLVKIGDRPMLQWVYEAAISCPSFSQVVVATDNADIAECVWS 61
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FG V MT GT+R E ++ + + N+QGD+P + P+++ +VK
Sbjct: 62 FGGVVEMTRTDHATGTDRVAEVAERY-PEMTAIANVQGDQPFVTPQMLTQLVKPYLRGES 120
Query: 169 AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQ 228
+T L +D DPN VK + D A+YFSR IPY ++ K P F HLG+
Sbjct: 121 PDMTTLACPLAEKDYGDPNAVKVLCDRRDRALYFSRAPIPYYRNHKPAPVF---HHLGLY 177
Query: 229 SYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESF 288
++ +FL Y L PTPL+ E LEQL+VLE+GY++ V ++ PED+ +++
Sbjct: 178 AFRRDFLAKYTKLAPTPLEDCEGLEQLRVLEHGYRITVCHTQTSTTEINTPEDLLQVQVL 237
Query: 289 MRERNL 294
+ ++ +
Sbjct: 238 LAKKAI 243
>gi|431932635|ref|YP_007245681.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Thioflavicoccus
mobilis 8321]
gi|431830938|gb|AGA92051.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Thioflavicoccus
mobilis 8321]
Length = 256
Score = 166 bits (421), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 93/249 (37%), Positives = 145/249 (58%), Gaps = 10/249 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR SSR GKPL+ I G+P+IQ +ER++ + +VVATDDE I C++ GAD
Sbjct: 6 VIPARHGSSRLPGKPLLEIAGRPLIQHVYERAR-ESRAGEIVVATDDESIVAVCREIGAD 64
Query: 113 VIMTSESCRNGTERCNEALQ-KLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V +TS + +G++R E ++ + ++VN+QGDEP + +ID V + L
Sbjct: 65 VQLTSSAHLSGSDRIAEVIEARGWPGETLIVNLQGDEPCMPGALIDQVAENLAGHDGVGM 124
Query: 172 STAVTSLKPEDAF-DPNRVKCVVDNHGYAIYFSRGLIPYN-----KSGKVNPQ-FPYLLH 224
+T + + DP+ VK V D+ G A+YFSR +P++ +S + P P+L H
Sbjct: 125 ATLAHPIADRRSLVDPHVVKVVTDSQGMALYFSRAPVPWHRDEFLRSATMLPSGTPFLRH 184
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVE 283
+G+ ++ ++FL+ Y P PL+L E LEQL+VL NG + V I GVD P D+E
Sbjct: 185 IGLYAFRADFLRRYVAWPPAPLELAESLEQLRVLWNGADIHVGIATKAPGPGVDTPADLE 244
Query: 284 KIESFMRER 292
+ +++ ER
Sbjct: 245 RAAAWLAER 253
>gi|357404916|ref|YP_004916840.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Methylomicrobium
alcaliphilum 20Z]
gi|351717581|emb|CCE23246.1| 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO
synthetase) (CMP-2-keto-3-deoxyoctulosonic acid
synthetase) (CKS) [Methylomicrobium alcaliphilum 20Z]
Length = 255
Score = 166 bits (421), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 98/253 (38%), Positives = 147/253 (58%), Gaps = 18/253 (7%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+ S+R GKPL+ I GKPMI ER++ A + +VVATDD +I + + G
Sbjct: 8 VIPARYGSTRLPGKPLLTIAGKPMIAHVCERAREADA-EEIVVATDDARIFDKVLELGIQ 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
+MT ++GTER E + D I+VN+QGDEPLI P+ I +AL A
Sbjct: 67 AVMTRGDHQSGTERIAEVAELCGWSDDTIIVNLQGDEPLIPPDYIRDAAEALAGQHRAGI 126
Query: 172 STAVTSLK-PEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK----------SGKVNPQFP 220
+T + PE+ F+PN VK V++ +GYA+YFSR IP+++ SGK++
Sbjct: 127 ATLAARITDPEEIFNPNSVKTVLNKNGYALYFSRAPIPWDRDHFSRQGRDFSGKID---- 182
Query: 221 YLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAH-GVDAP 279
YL H+G+ +Y +FL+ Y G +PL+ E LEQL++L +G + V V GVD
Sbjct: 183 YLRHIGMYAYRVDFLRRYCGWEASPLEAVESLEQLRILWHGESILVNTVAKTPEAGVDTE 242
Query: 280 EDVEKIESFMRER 292
+D++++E + ER
Sbjct: 243 DDLKRVERVLGER 255
>gi|386817782|ref|ZP_10105000.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Thiothrix nivea
DSM 5205]
gi|386422358|gb|EIJ36193.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Thiothrix nivea
DSM 5205]
Length = 247
Score = 166 bits (421), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 101/245 (41%), Positives = 146/245 (59%), Gaps = 6/245 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V +IPAR+ASSR GKPL + GK +IQ ER+ LA +++VATDDE+I C+ FG
Sbjct: 4 VVVIPARYASSRLPGKPLRVLAGKTLIQHVHERA-LAAGFANVLVATDDERIHAVCEGFG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
A V+MT+ + G++R E Q+ D IVVN+QGDEPL + +V+ L+ P
Sbjct: 63 AKVVMTASTHETGSDRLAEVAQQQGWADDTIVVNLQGDEPLTPVVNLHQLVRNLEQRPQD 122
Query: 170 VFSTAVTSLKPEDAF-DPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQ 228
+T T + E F +PN VK V D G A+YFSR IP+ + G + L H+G+
Sbjct: 123 SIATLATPITEESDFANPNIVKVVRDEQGMALYFSRAPIPFQREGGMPVGEYALRHIGMY 182
Query: 229 SYDSNFLKIYPGLHPT-PLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKIE 286
+Y + FLK + + P+ P QLE+ LEQL+ L NGY++ V I + A GVD ED +I
Sbjct: 183 AYRAGFLKAFAVMPPSLPEQLEK-LEQLRALANGYRIHVDIAAEIPAVGVDTEEDAVRIA 241
Query: 287 SFMRE 291
+ +++
Sbjct: 242 ALLQQ 246
>gi|255263763|ref|ZP_05343105.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Thalassiobium sp.
R2A62]
gi|255106098|gb|EET48772.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Thalassiobium sp.
R2A62]
Length = 266
Score = 166 bits (421), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 97/263 (36%), Positives = 149/263 (56%), Gaps = 18/263 (6%)
Query: 50 VVGIIPARFASSRFEGKPLVNILG-----KPMIQRTWERSKLATTLDHLVVATDDEKIAE 104
V+ +IPARFAS+R+ GKPLV + G K +I+R+W+ ++ + +D +VVATDD +I
Sbjct: 3 VLIVIPARFASTRYPGKPLVELRGASGEAKSLIRRSWDAAQQVSGIDRVVVATDDVRIQS 62
Query: 105 CCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQ 164
C+ FGA+V+MTSE+C NGTERC EA + L Y+IVVN+QGD PL I+ +V L+
Sbjct: 63 ACEAFGAEVVMTSEACVNGTERCAEAHEALGGSYEIVVNLQGDAPLTPAWFIEDLVAGLR 122
Query: 165 AAPDAVFSTAV--TSLKPEDAFDPNR-------VKCVVDNHGYAIYFSRGLIPYNKSGKV 215
A+ + +T V T + + F +R V A++FS+ +IP+ +
Sbjct: 123 ASEKSEVATPVLRTDGRALNGFLDDRRAGRVGGTTAVFGATKNALFFSKEVIPFTGADFA 182
Query: 216 -NPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAH 274
+ + P H+G+ +Y L YP PL+ E LEQL+ LE + ++VD +
Sbjct: 183 DDDETPVFHHVGVYAYRPEALAAYPSWDIGPLETLEGLEQLRFLERDRSVLCVEVDAKGR 242
Query: 275 G---VDAPEDVEKIESFMRERNL 294
++ P+DV K+E M E L
Sbjct: 243 QFWELNNPQDVPKLEVMMAEMGL 265
>gi|270261201|ref|ZP_06189474.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Serratia odorifera
4Rx13]
gi|270044685|gb|EFA17776.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Serratia odorifera
4Rx13]
Length = 249
Score = 166 bits (421), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 96/246 (39%), Positives = 145/246 (58%), Gaps = 7/246 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
+ IIPAR+AS+R GKPL +I GKPM+ ER++ + ++VATD ++A+ + G
Sbjct: 4 IAIIPARYASTRLPGKPLADIHGKPMVVHVMERAR-ESGASRVIVATDHPEVAKAVKAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MTS +GTER E ++ D I+VN+QGDEPLI P I+ V + L A+
Sbjct: 63 GEVCMTSPHHHSGTERLAEVIEHYGFADDEIIVNVQGDEPLIPPVIVRQVAENLAASQAG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK----SGKVNPQFPYLLHL 225
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ K + L H+
Sbjct: 123 MATLAVPIASAEEAFNPNAVKVVMDAQGYALYFSRATIPWDRERFAQSKESIGDSLLRHI 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI +Y + F++ Y P+ L+ E LEQL+VL G K+ V + GVD PED+++
Sbjct: 183 GIYAYRAGFVRRYVSWAPSQLEQIELLEQLRVLWYGEKIHVGVAKAIPTVGVDTPEDLQR 242
Query: 285 IESFMR 290
+ ++
Sbjct: 243 VRDSIK 248
>gi|204929799|ref|ZP_03220820.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Javiana str.
GA_MM04042433]
gi|418510809|ref|ZP_13077083.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Pomona str. ATCC 10729]
gi|452120849|ref|YP_007471097.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Javiana str.
CFSAN001992]
gi|204320793|gb|EDZ05994.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Javiana str.
GA_MM04042433]
gi|366085354|gb|EHN49240.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Pomona str. ATCC 10729]
gi|451909853|gb|AGF81659.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Javiana str.
CFSAN001992]
Length = 248
Score = 166 bits (421), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 99/246 (40%), Positives = 142/246 (57%), Gaps = 7/246 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPARF+S+R GKPLV+I GKPMI ER++ + + ++VATD E +A + G
Sbjct: 4 VVIIPARFSSTRLPGKPLVDINGKPMIVHVLERAR-ESGAERIIVATDHEDVARAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D ++VN+QGDEP+I II V + L
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCGFSDDTVIVNVQGDEPMIPAVIIRQVAENLAQRQVG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPY----LLHL 225
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ L HL
Sbjct: 123 MATLAVPIHSAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAKSMETVGDTCLRHL 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI Y + F++ Y P+PL+ E LEQL+VL G K+ V + GVD +D+E+
Sbjct: 183 GIYGYRAGFIRRYVSWQPSPLEHIEMLEQLRVLWYGEKIHVAVAKAVPGTGVDTADDLER 242
Query: 285 IESFMR 290
+ + MR
Sbjct: 243 VRAEMR 248
>gi|114769791|ref|ZP_01447401.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Rhodobacterales
bacterium HTCC2255]
gi|114549496|gb|EAU52378.1| 3-deoxy-manno-octulosonate cytidylyltransferase [alpha
proteobacterium HTCC2255]
Length = 260
Score = 166 bits (421), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 93/264 (35%), Positives = 148/264 (56%), Gaps = 22/264 (8%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILG-----KPMIQRTWERSKLATTLDHLVVATDDEKIA 103
+V+ ++PAR+ SSRF GKPL+ + G K ++QR+WE +K +D ++VATDD +I
Sbjct: 2 KVLIVVPARYESSRFPGKPLIELTGADGKTKSLVQRSWEAAKSVRNVD-VIVATDDSRIE 60
Query: 104 ECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKAL 163
+ ++FGA V+MTS C NGTERC EA+ ++ YD++VN+QGD PL ++ ++ +
Sbjct: 61 KVAKEFGASVVMTSSDCANGTERCAEAISNIDYDYDLIVNLQGDAPLSPAWFVEDLINSF 120
Query: 164 QAAPDAVFSTAVTSLKPED--AFDPNR-------VKCVVDNHGYAIYFSRGLIPYNKSGK 214
+ +A +T V E A +R V D + A+YFS+ +IPY+ K
Sbjct: 121 KGNKEADMATPVLRCDEETIMALKEDRSEGRVGGTTAVFDKNNKALYFSKEVIPYSNDKK 180
Query: 215 VNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAH 274
H+GI +Y LK Y G PL+ E LEQL+ LENG + ++V+ +
Sbjct: 181 TT----IFHHVGIYAYKPKALKEYIGWTSGPLEEAEGLEQLRFLENGGYINCVEVNGKGR 236
Query: 275 G---VDAPEDVEKIESFMRERNLS 295
V+ P DV K+ + +++ +S
Sbjct: 237 AFWEVNNPSDVPKVNAMLKKLGIS 260
>gi|308050209|ref|YP_003913775.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Ferrimonas
balearica DSM 9799]
gi|307632399|gb|ADN76701.1| 3-deoxy-D-manno-octulosonatecytidylyltransferase [Ferrimonas
balearica DSM 9799]
Length = 246
Score = 166 bits (421), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 98/242 (40%), Positives = 143/242 (59%), Gaps = 7/242 (2%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+AS+R GKPLV+I GKPMIQ ER+ LA+ + ++VATDDE++ + +
Sbjct: 6 VIPARYASTRLPGKPLVDIAGKPMIQHVVERA-LASGAERVIVATDDERV-QAALAGRCE 63
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V+MTS ++GTER E + L D IVVN+QGDEPLI I + + L ++
Sbjct: 64 VVMTSPDHQSGTERLAEVVDTLALADDAIVVNVQGDEPLIPSANIHQLAQNLAQGSASMA 123
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF---PYLLHLGIQ 228
+ AV E+ +PN VK V D HG+A+YFSR IP+++ G Q + H+GI
Sbjct: 124 TLAVAIEDAEEMHNPNAVKVVCDQHGHALYFSRAAIPWDRDGFAVAQGVSDGAMRHVGIY 183
Query: 229 SYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKIES 287
Y + F++ Y +PL+ E LEQL+VL K+ V V+ GVD PED+E++ +
Sbjct: 184 GYRAGFIRRYVAWPVSPLETIESLEQLRVLYQSEKIHVAAAVEPPPAGVDTPEDLERVRA 243
Query: 288 FM 289
+
Sbjct: 244 HL 245
>gi|33151569|ref|NP_872922.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Haemophilus
ducreyi 35000HP]
gi|71153798|sp|Q7VNY6.1|KDSB_HAEDU RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|33147789|gb|AAP95311.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Haemophilus
ducreyi 35000HP]
Length = 253
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 94/247 (38%), Positives = 145/247 (58%), Gaps = 9/247 (3%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR+ASSR GKPL++I G PMIQ W++++ A + +++ATD +I + FGA+
Sbjct: 6 IIPARYASSRLPGKPLLDINGYPMIQYVWQKAQQAGA-NRVIIATDHPQIQTVAKAFGAE 64
Query: 113 VIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTS+ ++GTER E + K+ +I+VN+QGDEPLI P I+ V L +
Sbjct: 65 VCMTSDQHQSGTERLAEVVAKMAIADQEIIVNVQGDEPLIPPIIVQQVATNLDKNGVNMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS--GKVNPQFP----YLLHL 225
+ AV E+ F+PN VK V+++ G A+YFSR +P+ + + + F YL H+
Sbjct: 125 TLAVKLTTREELFNPNVVKTVINDKGMALYFSRAAVPFARDHFSECDDTFVASQCYLRHI 184
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI +Y + F+K Y PT L+ E LEQL+ L G ++ V + A GVD +D+ +
Sbjct: 185 GIYAYRAGFIKQYVAWQPTVLEQLESLEQLRALWYGEQIHVELAKQAPALGVDTAQDLAR 244
Query: 285 IESFMRE 291
+ + +
Sbjct: 245 VRQMLSQ 251
>gi|300690596|ref|YP_003751591.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Ralstonia
solanacearum PSI07]
gi|299077656|emb|CBJ50292.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Ralstonia
solanacearum PSI07]
gi|344167440|emb|CCA79667.1| 3-deoxy-manno-octulosonate cytidylyltransferase [blood disease
bacterium R229]
Length = 268
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 95/252 (37%), Positives = 138/252 (54%), Gaps = 16/252 (6%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V +IPAR AS+R KPL +I GKPM+ R ER+ ++ +VVATD +A+ C Q
Sbjct: 7 VAVIPARLASTRLPNKPLADIGGKPMVVRVAERAHQSSAA-RVVVATDAVSVADACMQHH 65
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+ ++T +GT+R E L D IVVN+QGDEPLI P +ID V L+ D
Sbjct: 66 IEAVLTRADHASGTDRLAEVATVLALPDDAIVVNVQGDEPLIAPTLIDNVAAHLRDHADC 125
Query: 170 VFSTAVTSLK-PEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSG------------KVN 216
+TA + D F+PN VK V+D A+ FSR +P+ + +
Sbjct: 126 AIATAAHPIHDAADIFNPNVVKVVLDAAERAMLFSRAPLPWARDAWTPAVLGKPAAERPL 185
Query: 217 PQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHE-AHG 275
P P L H+GI +Y + FL+ +P L PL+L E LEQL+ + +G ++ V+ D A G
Sbjct: 186 PAMPVLRHIGIYAYRAGFLRRFPQLAAAPLELTEQLEQLRAMWHGERIAVLTTDDAPAAG 245
Query: 276 VDAPEDVEKIES 287
VD PED+ ++ +
Sbjct: 246 VDTPEDLARVRA 257
>gi|422969885|ref|ZP_16973678.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
TA124]
gi|371600742|gb|EHN89512.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
TA124]
Length = 246
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 88/242 (36%), Positives = 142/242 (58%), Gaps = 5/242 (2%)
Query: 48 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQ 107
S+ V +IPAR+ SSR GKPL++I+GKPMIQ +E + + + VATDD ++ + Q
Sbjct: 2 SKAVIVIPARYGSSRLPGKPLLDIVGKPMIQHVYECALQVAGVAEVWVATDDPRVEQAVQ 61
Query: 108 QFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
FG IMT +GT+R E + K+E DI +N+QGDEP+I P ++ +++ ++ P
Sbjct: 62 AFGGKAIMTRNDHESGTDRLVEVMHKVEA--DIYINLQGDEPMIRPRDVETLLQGMRDDP 119
Query: 168 DAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+T ++ E+A +P+ VK VV+ A+YFSR IPY ++ + + YL H+GI
Sbjct: 120 ALPVATLCHAISAEEATEPSTVKVVVNTRQDALYFSRSPIPYPRNAE---KARYLKHVGI 176
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
+Y + L+ Y L + + E LEQL+++ G ++ +V GVD P +EK+ +
Sbjct: 177 YAYRRDVLQNYSQLPESMQEQAESLEQLRLMSAGINIRTFEVAATGPGVDTPACLEKVRA 236
Query: 288 FM 289
M
Sbjct: 237 LM 238
>gi|417588050|ref|ZP_12238814.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
STEC_C165-02]
gi|345332937|gb|EGW65389.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Escherichia coli
STEC_C165-02]
Length = 246
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 88/245 (35%), Positives = 144/245 (58%), Gaps = 5/245 (2%)
Query: 48 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQ 107
S+ V +IPAR+ SSR GKPL++I+GKPMIQ +ER+ + + VATDD ++ + Q
Sbjct: 2 SKAVIVIPARYGSSRLPGKPLLDIVGKPMIQHVYERALQVAGVAEVWVATDDPRVEKAVQ 61
Query: 108 QFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
FG IMT +GT+R E + +E DI +N+QGDEP+I P ++ +++ ++ P
Sbjct: 62 AFGGKAIMTRNDHESGTDRLVEVMHTVEA--DIYINLQGDEPMIRPRDVETLLQGMRDDP 119
Query: 168 DAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+T ++ E+A +P+ VK VV+ A+YFSR IPY ++ + + YL H+GI
Sbjct: 120 ALPVATLCHAISAEEAAEPSTVKVVVNTRQDALYFSRSPIPYPRNAE---KARYLKHVGI 176
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
+Y + L+ Y L + + E LEQL+++ G ++ +V GVD P +EK+ +
Sbjct: 177 YAYRRDVLQNYSQLPESMPEQAESLEQLRLMSAGINIRTFEVAATGPGVDTPACLEKVCA 236
Query: 288 FMRER 292
M ++
Sbjct: 237 LMAQK 241
>gi|343518111|ref|ZP_08755106.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Haemophilus
pittmaniae HK 85]
gi|343394096|gb|EGV06645.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Haemophilus
pittmaniae HK 85]
Length = 256
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 106/247 (42%), Positives = 147/247 (59%), Gaps = 11/247 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPARFASSR GKPL +I GKPMIQ +E++ L + +V+ATD+ ++ Q F A+
Sbjct: 6 IIPARFASSRLPGKPLADIGGKPMIQHVYEKA-LQSGAKRVVIATDNAQVEAAAQAFAAE 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V MTSE +GTER E ++KL D I+VNIQGDEPLI P I+ V L +
Sbjct: 65 VCMTSEKHNSGTERLAEVVEKLALPDDEIIVNIQGDEPLIPPVIVHQVANNLAKFQVNMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP--------YLL 223
S AV E+ F+PN VK V D +GY +YFSR +IPY++ + P YL
Sbjct: 125 SLAVKIEDAEELFNPNAVKVVTDKNGYVLYFSRSVIPYDRDQFMALDNPAQAQLADVYLR 184
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDV 282
H+GI +Y + F+K Y P+ L+ E LEQL+VL +G ++ V + + A GVD ED+
Sbjct: 185 HIGIYAYRAGFIKQYVAWAPSQLEQLEKLEQLRVLWHGERIHVELAKEVPAVGVDTAEDL 244
Query: 283 EKIESFM 289
K+ + +
Sbjct: 245 AKVRAIV 251
>gi|168466582|ref|ZP_02700444.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Newport str. SL317]
gi|418761656|ref|ZP_13317796.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35185]
gi|418768212|ref|ZP_13324267.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35199]
gi|418769364|ref|ZP_13325394.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21539]
gi|418777540|ref|ZP_13333468.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Newport str. CVM 33953]
gi|418779227|ref|ZP_13335131.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35188]
gi|418787022|ref|ZP_13342829.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21559]
gi|418805050|ref|ZP_13360643.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35202]
gi|419788178|ref|ZP_14313871.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Newport str. Levine 1]
gi|419795601|ref|ZP_14321195.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Newport str. Levine 15]
gi|195630901|gb|EDX49487.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Newport str. SL317]
gi|392612486|gb|EIW94963.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Newport str. Levine 15]
gi|392618145|gb|EIX00556.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Newport str. Levine 1]
gi|392732141|gb|EIZ89353.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35199]
gi|392739392|gb|EIZ96526.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35185]
gi|392739660|gb|EIZ96792.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21539]
gi|392743743|gb|EJA00810.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Newport str. CVM 33953]
gi|392746305|gb|EJA03320.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21559]
gi|392753694|gb|EJA10620.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35188]
gi|392768552|gb|EJA25304.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35202]
Length = 248
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/246 (40%), Positives = 142/246 (57%), Gaps = 7/246 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPARF+S+R GKPLV+I GKPMI ER++ + + ++VATD E +A + G
Sbjct: 4 VVIIPARFSSTRLPGKPLVDINGKPMIVHVLERAR-ESGAERIIVATDHEDVARAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D ++VN+QGDEP+I II V + L
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCGFSEDTVIVNVQGDEPMIPAVIIRQVAENLAQRQVG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPY----LLHL 225
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ L HL
Sbjct: 123 MATLAVPIHSAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAKSLETVGDTCLRHL 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI Y + F++ Y P+PL+ E LEQL+VL G K+ V + GVD +D+E+
Sbjct: 183 GIYGYRAGFIRRYVSWQPSPLEHIEMLEQLRVLWYGEKIHVAVAKAVPGTGVDTADDLER 242
Query: 285 IESFMR 290
+ + MR
Sbjct: 243 VRAEMR 248
>gi|339505661|ref|YP_004693081.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Roseobacter
litoralis Och 149]
gi|338759654|gb|AEI96118.1| 3-deoxy-manno-octulosonate cytidylyltransferase KdsB [Roseobacter
litoralis Och 149]
Length = 266
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/261 (37%), Positives = 141/261 (54%), Gaps = 22/261 (8%)
Query: 54 IPARFASSRFEGKPLVNILGKP-----MIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
IPAR+ASSR+ GKPLV + G +I+R+W + + +D +VVATDD +I + Q
Sbjct: 7 IPARYASSRYPGKPLVGLRGASGETLSLIERSWRAAMDVSGIDRVVVATDDTRIQDAAQA 66
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168
FGA+V+MTS C NGTERC E L ++IVVN+QGD PL I+ +V L AP
Sbjct: 67 FGAEVVMTSPDCANGTERCAEVHAALGGGFEIVVNLQGDAPLTPAWFIEDLVAGLSNAPT 126
Query: 169 AVFSTAVTS---------LKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPY-NKSGKVNPQ 218
A +T V L A V + +A+YFS+ +IP+ ++ + Q
Sbjct: 127 AEIATPVLRCDGETLQGLLNDRKAGRVGGTTAVFAQNNHALYFSKEVIPFTSQDYSEDAQ 186
Query: 219 FPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHG--- 275
P H+G+ +Y L YPG PL+ E LEQL+ +ENG V+ V+ EA G
Sbjct: 187 TPVFHHVGVYAYRPAALAAYPGWQVGPLERLEGLEQLRFMENG--RSVLCVEVEAKGRQF 244
Query: 276 --VDAPEDVEKIESFMRERNL 294
++ PEDV ++E+ M L
Sbjct: 245 WELNNPEDVPRLEAMMAAMGL 265
>gi|359783440|ref|ZP_09286654.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
psychrotolerans L19]
gi|359368657|gb|EHK69234.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pseudomonas
psychrotolerans L19]
Length = 254
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 95/246 (38%), Positives = 143/246 (58%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR AS+R KPL++I GKPMIQ WE+++ + + +VVATD + I C+ FGA
Sbjct: 8 VIPARLASTRLPNKPLLDIAGKPMIQHVWEQARRSGA-EQVVVATDHDDILRACEGFGAR 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V++T +GT+R E + L D +VVN+QGDEPLI P +ID V L A P+A
Sbjct: 67 VLLTRADHASGTDRLAEVAELLGLANDALVVNVQGDEPLIPPAVIDQVAGNLAAHPEAGV 126
Query: 172 STAVTSLKPEDA-FDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVN-----PQ-FPYLLH 224
+T + D+ F+PN VK D +G A+ FSR +P+ ++ + PQ FPY H
Sbjct: 127 ATLAEPISDVDSLFNPNVVKVSTDVNGLALTFSRAPLPWARNAFASDRAQLPQGFPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDAPEDVE 283
+GI +Y + FL + P L+ E LEQL+ L +G ++ V ++ GVD ED++
Sbjct: 187 IGIYAYRAGFLADFVSWGPCALEETEALEQLRALWHGVRIHVADALEAPQAGVDTLEDLD 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|253688159|ref|YP_003017349.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pectobacterium
carotovorum subsp. carotovorum PC1]
gi|259494414|sp|C6DFA4.1|KDSB_PECCP RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|251754737|gb|ACT12813.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pectobacterium
carotovorum subsp. carotovorum PC1]
Length = 250
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/246 (40%), Positives = 140/246 (56%), Gaps = 7/246 (2%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPARFASSR GKPL +I GKPM+ ER+ L + ++VATD + +Q G +
Sbjct: 6 IIPARFASSRLPGKPLADINGKPMVVHVMERA-LESGAQRVIVATDHPDVETAVKQAGGE 64
Query: 113 VIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V +T +GTER E +++ DI+VN+QGDEPLI II V + L A+ +
Sbjct: 65 VCLTRADHNSGTERLAEVIERYGFTDDDIIVNVQGDEPLIPSVIIRQVAENLAASKAGMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK----SGKVNPQFPYLLHLGI 227
+ AV E+AF+PN VK V D GYA+YFSR IP+++ K +L HLGI
Sbjct: 125 TLAVPIETSEEAFNPNAVKVVTDAEGYALYFSRATIPWDRERFAQSKETIGDHFLRHLGI 184
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKIE 286
+Y + F++ Y P+ L+ E LEQL+VL G K+ V + + GVD PED+ ++
Sbjct: 185 YAYRAGFVRRYVSWAPSQLEQIELLEQLRVLWYGEKIHVAVAKAVPSVGVDTPEDLARVR 244
Query: 287 SFMRER 292
M R
Sbjct: 245 HVMANR 250
>gi|21674644|ref|NP_662709.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlorobium tepidum
TLS]
gi|81790746|sp|Q8KBF7.1|KDSB_CHLTE RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|21647847|gb|AAM73051.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Chlorobium tepidum
TLS]
Length = 248
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 95/246 (38%), Positives = 149/246 (60%), Gaps = 8/246 (3%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V +IPAR +SSR + K L ++ G+P+I RTW+++ + +VVATD E+I ++ G
Sbjct: 4 VIVIPARLSSSRLKEKMLADLEGEPLIVRTWQQATKSRLASRVVVATDSERIFAVLREAG 63
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIID-GVVKALQAAPDA 169
A+V+MTS GT+R EA +++ D+ VN+QGDEPLI+P ID + P
Sbjct: 64 AEVVMTSPDLTCGTDRIAEAAEQVGG--DVFVNLQGDEPLIDPATIDLAIAPFFGEGPLP 121
Query: 170 VFSTAVTSLKPEDAF---DPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLG 226
+T V LKP++ DP+ VK V+D G A+YFSR IPY + + P Y H+G
Sbjct: 122 DCTTLVFPLKPDERQIIDDPHVVKAVLDTRGNALYFSRSPIPYRR--ETLPDTKYYRHIG 179
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIE 286
+ ++ ++ LK + L P+ L+ E LEQL++LENGY+++ I+ + GV+ E++E++
Sbjct: 180 LYAFRADVLKAFVALPPSMLERAESLEQLRLLENGYRIRCIETTTDTPGVNTEEELEEVR 239
Query: 287 SFMRER 292
RER
Sbjct: 240 RLFRER 245
>gi|406938243|gb|EKD71519.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [uncultured
bacterium]
Length = 278
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 92/252 (36%), Positives = 139/252 (55%), Gaps = 15/252 (5%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPARF+S+R GKPLV + K ++ R W +K +D + + T+D +IA+ +QFGA
Sbjct: 21 VIPARFSSTRLPGKPLVLVKDKSLLYRVWSIAKAVHAVDQIYITTEDGRIADHAKQFGAK 80
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFS 172
VIMTS +C NGTER A++ L K DI++N+QGD L P +I ++ + P +
Sbjct: 81 VIMTSATCNNGTERALAAVETLSDKPDIILNLQGDAVLTPPWVIQALLDEMLHQPSIMLG 140
Query: 173 TAVTSLKPEDAFDP----------NRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYL 222
T T +K +D +D V D A+YFS+ +IP+ ++ + P
Sbjct: 141 TIATQMKQQD-YDSMCLSKLNGAIGGTTVVFDKKHNALYFSKNIIPFIRN-RSEDSLPVY 198
Query: 223 LHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAH---GVDAP 279
H+G+ +Y LK Y L PT L+ E LEQL+ LENG +KV+ VD++ +D+
Sbjct: 199 RHIGLYAYRYITLKQYVALAPTLLEQTEGLEQLRALENGIPIKVVVVDYQGRTPLAIDSD 258
Query: 280 EDVEKIESFMRE 291
EDV E + E
Sbjct: 259 EDVIAAEKIINE 270
>gi|329847847|ref|ZP_08262875.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Asticcacaulis
biprosthecum C19]
gi|328842910|gb|EGF92479.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Asticcacaulis
biprosthecum C19]
Length = 260
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/261 (37%), Positives = 147/261 (56%), Gaps = 22/261 (8%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGK-----PMIQRTWERSKLATTLDHLVVATDDEKIA 103
+ V IIPAR+ASSR+ GKPLV + GK +IQR+WE +K +D + VATDD++I
Sbjct: 2 KTVVIIPARYASSRYPGKPLVMLKGKDGVAKSLIQRSWEAAKAVKGVDAVYVATDDDRIR 61
Query: 104 ECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKAL 163
+ + FGA+VIMTSE C NGTER +AL L YD+ VN+QGD PL ++ ++ +
Sbjct: 62 DAAEAFGAEVIMTSELCANGTERVADALPGLPHAYDLYVNLQGDAPLTPAWFVEDLIAEM 121
Query: 164 QAAPDAVFSTAVTSLKPEDAFDPNRVK-----------CVVDNHGYAIYFSRGLIPYN-K 211
+ P+ +T V L+ + N V+ V D+ A+YFS+ +IPY K
Sbjct: 122 KKHPEVQMATPV--LRCDALTHANFVEDRLHGRVGGTTAVFDSSMNALYFSKEVIPYTGK 179
Query: 212 SGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDH 271
+ P H+G+ +Y + L+ Y G PL+ E LEQL+ LENG ++ ++VD
Sbjct: 180 TFAEGDLIPVFHHVGVYAYRAEALEAYVGWSTGPLEKYEGLEQLRFLENGVPIRCVEVDG 239
Query: 272 EAH---GVDAPEDVEKIESFM 289
++ P DV +IES +
Sbjct: 240 RGRVFWELNNPVDVARIESLI 260
>gi|422022284|ref|ZP_16368792.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Providencia
sneebia DSM 19967]
gi|414096777|gb|EKT58433.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Providencia
sneebia DSM 19967]
Length = 247
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 96/246 (39%), Positives = 140/246 (56%), Gaps = 11/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPAR+AS+R GKPL +I G+PM+ R E++ + + ++VATD +A Q G +
Sbjct: 5 IIPARYASTRLPGKPLADIHGQPMVVRVMEQA-IKSGASRVIVATDHADVAAAVIQAGGE 63
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
MT + ++GTER E + D I+VN+QGDEPLI PEII V L+ + +
Sbjct: 64 ACMTDPNHQSGTERLAEVIDTYGFADDEIIVNVQGDEPLIPPEIISQVAANLRGSKAQMG 123
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK------SGKVNPQFPYLLHL 225
+ AV + F+PN VK V D+ GYA+YFSR IP+++ + + F L H+
Sbjct: 124 TLAVKITDSAEVFNPNAVKVVTDHEGYALYFSRAAIPWDRDRFSVATDTIGDDF--LRHI 181
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHE-AHGVDAPEDVEK 284
GI +Y + F++ Y P+PL+ E LEQL+VL G K+ V + GVD PED+E
Sbjct: 182 GIYAYRAGFIRRYIAWEPSPLEKIEMLEQLRVLWYGEKIHVAVAEKAPGAGVDTPEDLEA 241
Query: 285 IESFMR 290
+ R
Sbjct: 242 VRKNFR 247
>gi|332288738|ref|YP_004419590.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Gallibacterium
anatis UMN179]
gi|330431634|gb|AEC16693.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Gallibacterium
anatis UMN179]
Length = 258
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/252 (39%), Positives = 149/252 (59%), Gaps = 16/252 (6%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIP+R+ASSR GKPL +I GKPMIQ WE+++L+ ++VATD +I + + FG +
Sbjct: 6 IIPSRYASSRLPGKPLKDIAGKPMIQHVWEKAQLSGA-TRVIVATDHPEIEKVVKAFGGE 64
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V +TS+ +GTER E + KL D IVVNIQGDEPLI P I+ V + L +
Sbjct: 65 VCLTSDKHNSGTERLAEVVTKLALPDDEIVVNIQGDEPLIPPVIVKQVAENLDKYQVNMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVN----PQ----FP--- 220
+ +V + ++ F+PN VK + D +GY +YFSR +IP+++ + PQ F
Sbjct: 125 TLSVKIDEAQELFNPNVVKVLTDKNGYVLYFSRAVIPWHRDQFSDVYQQPQKIEHFALLA 184
Query: 221 --YLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVD 277
Y H+GI +Y + F++ Y PT L+ E LEQL+VL +G K+ ++ A GVD
Sbjct: 185 DLYQRHIGIYAYKAGFIRQYVAWQPTALEQCESLEQLRVLWHGEKIHCEPALEIPAVGVD 244
Query: 278 APEDVEKIESFM 289
ED+ K+ + +
Sbjct: 245 TEEDLRKVRAIL 256
>gi|344172229|emb|CCA84861.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Ralstonia syzygii
R24]
Length = 268
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 95/252 (37%), Positives = 138/252 (54%), Gaps = 16/252 (6%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V +IPAR AS+R KPL +I GKPM+ R ER+ ++ +VVATD +A+ C Q
Sbjct: 7 VAVIPARLASTRLPDKPLADIGGKPMVVRVAERAH-QSSATRVVVATDAVSVADACMQHH 65
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+ ++T +GT+R E L D IVVN+QGDEPLI P +ID V L+ D
Sbjct: 66 IEAVLTRTDHASGTDRLAEVATVLALPDDAIVVNVQGDEPLIAPTLIDNVAAHLRDHADC 125
Query: 170 VFSTAVTSLK-PEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSG------------KVN 216
+TA + D F+PN VK V+D A+ FSR +P+ + +
Sbjct: 126 AIATAAHPIHDAADIFNPNVVKVVLDAAERAMLFSRAPLPWARDAWTPAVLGKPAAERPL 185
Query: 217 PQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHE-AHG 275
P P L H+GI +Y + FL+ +P L PL+L E LEQL+ + +G ++ V+ D A G
Sbjct: 186 PAMPVLRHIGIYAYRAGFLRRFPQLAAAPLELTEQLEQLRAMWHGERIAVLTTDDAPAAG 245
Query: 276 VDAPEDVEKIES 287
VD PED+ ++ +
Sbjct: 246 VDTPEDLARVRA 257
>gi|398344881|ref|ZP_10529584.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Leptospira inadai
serovar Lyme str. 10]
Length = 248
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 93/246 (37%), Positives = 141/246 (57%), Gaps = 8/246 (3%)
Query: 49 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ 108
+++ +IPAR SSRF GKP+ ILGKPMI +ER ++ L VAT D +IAE +
Sbjct: 2 KILALIPARMGSSRFPGKPMAKILGKPMIGHVYERVSQSSILSLTAVATCDTEIAEYIRS 61
Query: 109 FGADVIMTSESCRNGTERCNEALQKLEK----KYDIVVNIQGDEPLIEPEIIDGVVKALQ 164
G +MT ++RC EAL+ LEK ++DIVV +QGDEP+ PE++ V+ L
Sbjct: 62 IGGKAVMTGSHHERASDRCAEALEILEKEKGIRFDIVVMVQGDEPMTHPEMLRESVEPLL 121
Query: 165 AAPDAVFSTAVTSLKPEDAF-DPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLL 223
D ++ ++ + F D N +K V D + AIYFSR IP KV+ Q P
Sbjct: 122 ENNDISVVNLISKIESVEEFEDRNCIKVVCDLNNNAIYFSREPIPTR--SKVD-QVPMFK 178
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVE 283
+ I + +FL Y L PTPL++ E ++ +++LE+G K+K+ ++ VD PED++
Sbjct: 179 QVCIIPFRRDFLIEYTKLEPTPLEIIESVDMMRILEHGLKVKMAPTKYKTSAVDTPEDLK 238
Query: 284 KIESFM 289
++E M
Sbjct: 239 RVEKLM 244
>gi|345877154|ref|ZP_08828909.1| putative ABC transporter ATP-binding protein [endosymbiont of
Riftia pachyptila (vent Ph05)]
gi|344225790|gb|EGV52138.1| putative ABC transporter ATP-binding protein [endosymbiont of
Riftia pachyptila (vent Ph05)]
Length = 254
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/252 (39%), Positives = 148/252 (58%), Gaps = 13/252 (5%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IPAR+AS R GKPL++I G+PMI+ +R+ L + +V+ATDD +IA+ + FGAD
Sbjct: 6 VIPARYASVRLPGKPLLDIAGRPMIEHVHQRA-LESGATEVVIATDDARIADAAKAFGAD 64
Query: 113 VIMTSESCRNGTERCNE-ALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
MTS R+G++R E A + IVVN+QGDEP + +ID V + + + A
Sbjct: 65 ACMTSAHHRSGSDRIAEVAESRGWSDQTIVVNLQGDEPCMPAALIDQVAQDMASHKKAGV 124
Query: 172 ST--AVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPY------NKSGKVNPQFPYLL 223
+T A S KP FD + VK V D+ GYA+YFSR IP+ N SG + +
Sbjct: 125 TTLSAPISEKPM-LFDSHVVKVVTDSEGYALYFSRAPIPWHRDEFINDSGPLPQNVSFAR 183
Query: 224 HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHE-AHGVDAPEDV 282
H+G+ +Y +LK + P P++L E LEQL+VL +G ++ V + E HGVD D+
Sbjct: 184 HIGLYAYRVGYLKQFVAWPPAPIELAESLEQLRVLWHGGRIHVSQASQEPGHGVDTQGDL 243
Query: 283 EKIESFMRERNL 294
+++ +R RN+
Sbjct: 244 KRVTEQLR-RNV 254
>gi|84501336|ref|ZP_00999541.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Oceanicola
batsensis HTCC2597]
gi|84390627|gb|EAQ03115.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Oceanicola
batsensis HTCC2597]
Length = 263
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 96/260 (36%), Positives = 146/260 (56%), Gaps = 19/260 (7%)
Query: 53 IIPARFASSRFEGKPLVNILG-----KPMIQRTWERSKLATTLDHLVVATDDEKIAECCQ 107
IPAR+AS+R+ GKPLV + G K +I+R+WE +K +D + V TDD++I +
Sbjct: 6 FIPARYASTRYPGKPLVELTGATGEKKSLIRRSWEAAKAVEGIDAVYVLTDDDRIRAASE 65
Query: 108 QFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
FGA+VIMTS RNGTERC E + KL + +IVVN+QGD PL + +V ++A P
Sbjct: 66 AFGAEVIMTSSEARNGTERCAEGVAKLPDEPEIVVNLQGDAPLTPAWFVADLVAHMRANP 125
Query: 168 DAVFSTAVTSLKPEDA--FDPNR-------VKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ 218
A +T V + + F +R V+ G AIYFS+ ++PY S + P+
Sbjct: 126 GAQMATPVLPTEADTLANFVTDRKEGRVGGTTAVMRADGTAIYFSKEVLPYVGSLETPPK 185
Query: 219 FPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAH---G 275
+ H+G +Y L+ Y G PL+ E LEQL+ LENG+ + + V+
Sbjct: 186 VWH--HVGCYAYRPGALRAYAGWPEGPLEQAEGLEQLRFLENGWDVACVPVEGRGRVFWE 243
Query: 276 VDAPEDVEKIESFMRERNLS 295
++ P DVE+IES +++ ++
Sbjct: 244 LNNPVDVERIESVLKKEGIA 263
>gi|307130840|ref|YP_003882856.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Dickeya dadantii
3937]
gi|306528369|gb|ADM98299.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Dickeya dadantii
3937]
Length = 250
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 97/244 (39%), Positives = 140/244 (57%), Gaps = 7/244 (2%)
Query: 52 GIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGA 111
IIPAR+AS+R GKPL +I GKPM+ ER++ + +VVATD +A + G
Sbjct: 5 AIIPARYASTRLPGKPLADIHGKPMVVHVMERAR-ESGASRVVVATDHADVARAIELAGG 63
Query: 112 DVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAV 170
+V +TS +GTER E + + D I+VN+QGDEPLI P II V L + +
Sbjct: 64 EVCLTSPDHNSGTERLAEVIDRYGFADDEIIVNVQGDEPLIPPVIIRQVADNLAGSRAGM 123
Query: 171 FSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP----YLLHLG 226
+ AV E+AF+PN VK V D GYA+YFSR IP+ + + +L H+G
Sbjct: 124 ATLAVPITTCEEAFNPNAVKVVTDAEGYALYFSRATIPWERDRFAESRDAIGDYFLRHIG 183
Query: 227 IQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKI 285
I +Y + F++ Y G P+ L+ E LEQL+VL G K+ V + + + GVD PED+ ++
Sbjct: 184 IYAYRAGFIRRYVGWAPSQLEKIEMLEQLRVLWYGEKIHVAVAKEVPSVGVDTPEDLARV 243
Query: 286 ESFM 289
+ M
Sbjct: 244 RAVM 247
>gi|432688376|ref|ZP_19923650.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE161]
gi|431236799|gb|ELF31997.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia coli
KTE161]
Length = 246
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 87/241 (36%), Positives = 143/241 (59%), Gaps = 5/241 (2%)
Query: 48 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQ 107
S+ V +IPAR+ SSR GKPL++I+GKPMIQ +ER+ + + VATDD+++ + Q
Sbjct: 2 SKAVIVIPARYGSSRLPGKPLLDIVGKPMIQHVYERALQVVGVAEVWVATDDQRVEKAVQ 61
Query: 108 QFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAP 167
FG IMT +GT+R E + K+E DI +N+QGDEP+I P + +++ ++ P
Sbjct: 62 AFGGKSIMTRNDHESGTDRLVEVMHKVEA--DININLQGDEPMIRPRDVGTLLQGMRDDP 119
Query: 168 DAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGI 227
+T ++ E+A +P+ VK VV+ A+YFSR IPY ++ + + YL H+GI
Sbjct: 120 ALPVATLCHAISAEEATEPSTVKVVVNTRQDALYFSRSPIPYPRNAE---KARYLKHVGI 176
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIES 287
+Y + L+ Y L + + E LEQL+++ G ++ ++ + GVD P +EK+ +
Sbjct: 177 YAYRRDVLQNYSQLPESMPEQAESLEQLRLMNAGINIRTFEIAATSPGVDTPACLEKVRA 236
Query: 288 F 288
Sbjct: 237 L 237
>gi|398912444|ref|ZP_10655969.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas sp.
GM49]
gi|398182174|gb|EJM69700.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Pseudomonas sp.
GM49]
Length = 254
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/246 (40%), Positives = 145/246 (58%), Gaps = 10/246 (4%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
+IP+R+AS+R GKPL+ I GKPMIQ WE++ ++ + +VVATDD +I E C FGA+
Sbjct: 8 VIPSRYASTRLPGKPLLLIAGKPMIQHVWEQAS-KSSAERVVVATDDARIIEACNGFGAE 66
Query: 113 VIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V++T E +GT+R E KL D IVVN+QGDEPLI P +ID V L A +A
Sbjct: 67 VVLTREDHNSGTDRLAEVAMKLGLAPDAIVVNVQGDEPLIPPSVIDQVAANLAAHAEARM 126
Query: 172 STAVTSLKPEDA-FDPNRVKCVVDNHGYAIYFSRGLIPYNKSG-KVNPQ-----FPYLLH 224
+T ++ D F+PN VK V D +G A+ FSR +P+ + VN + PY H
Sbjct: 127 ATLAEPIEDADTLFNPNVVKVVSDLNGLALTFSRSTLPWARDAFAVNREQLPEGVPYRRH 186
Query: 225 LGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDAPEDVE 283
+GI +Y + FL+ + P L+ E LEQL+ L +G ++ V + GVD ED+E
Sbjct: 187 IGIYAYRAGFLQDFVSWGPCWLENTECLEQLRALWHGVRIHVADALIAPPAGVDTVEDLE 246
Query: 284 KIESFM 289
++ +
Sbjct: 247 RVRRLL 252
>gi|16764348|ref|NP_459963.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Typhimurium str. LT2]
gi|62179515|ref|YP_215932.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SC-B67]
gi|161614774|ref|YP_001588739.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Paratyphi B str. SPB7]
gi|167553013|ref|ZP_02346763.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA29]
gi|167994937|ref|ZP_02576027.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar 4,[5],12:i:- str.
CVM23701]
gi|168233407|ref|ZP_02658465.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Kentucky str. CDC 191]
gi|168237091|ref|ZP_02662149.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
SL480]
gi|168243755|ref|ZP_02668687.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL486]
gi|168263518|ref|ZP_02685491.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Hadar str. RI_05P066]
gi|168822082|ref|ZP_02834082.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Weltevreden str.
HI_N05-537]
gi|194445731|ref|YP_002040186.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Newport str. SL254]
gi|194449889|ref|YP_002044980.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL476]
gi|194469387|ref|ZP_03075371.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Kentucky str. CVM29188]
gi|194736600|ref|YP_002114040.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
CVM19633]
gi|197247444|ref|YP_002145906.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Agona str. SL483]
gi|197261619|ref|ZP_03161693.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA23]
gi|200389698|ref|ZP_03216309.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Virchow str. SL491]
gi|205352195|ref|YP_002225996.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Gallinarum str. 287/91]
gi|224582798|ref|YP_002636596.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Paratyphi C strain
RKS4594]
gi|238913239|ref|ZP_04657076.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Tennessee str.
CDC07-0191]
gi|374981655|ref|ZP_09722979.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Typhimurium str.
TN061786]
gi|375000699|ref|ZP_09725039.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Infantis str. SARB27]
gi|375113836|ref|ZP_09759006.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SCSA50]
gi|375122989|ref|ZP_09768153.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Gallinarum str. SG9]
gi|378444425|ref|YP_005232057.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Typhimurium str.
D23580]
gi|378449348|ref|YP_005236707.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Typhimurium str.
14028S]
gi|378698883|ref|YP_005180840.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Typhimurium str.
SL1344]
gi|378983546|ref|YP_005246701.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Typhimurium str.
T000240]
gi|378988332|ref|YP_005251496.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Typhimurium str. UK-1]
gi|379700154|ref|YP_005241882.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Typhimurium str.
ST4/74]
gi|383495727|ref|YP_005396416.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Typhimurium str. 798]
gi|386590853|ref|YP_006087253.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Heidelberg str. B182]
gi|409249402|ref|YP_006885231.1| 3-deoxy-manno-octulosonatecytidylyltransferase [Salmonella enterica
subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
gi|416421991|ref|ZP_11689895.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str.
315996572]
gi|416431508|ref|ZP_11695662.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-1]
gi|416441512|ref|ZP_11701724.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-3]
gi|416443800|ref|ZP_11703276.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-4]
gi|416452590|ref|ZP_11709085.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-1]
gi|416459218|ref|ZP_11713727.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-2]
gi|416467507|ref|ZP_11717419.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str. 531954]
gi|416477637|ref|ZP_11721522.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str.
NC_MB110209-0054]
gi|416500324|ref|ZP_11731395.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str.
CASC_09SCPH15965]
gi|416528882|ref|ZP_11744106.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str. LQC 10]
gi|416535890|ref|ZP_11748084.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str. SARB30]
gi|416545682|ref|ZP_11753476.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str. 19N]
gi|416571993|ref|ZP_11767076.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str. 4441 H]
gi|416578372|ref|ZP_11770492.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str.
81038-01]
gi|416582310|ref|ZP_11772584.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str.
MD_MDA09249507]
gi|416593621|ref|ZP_11780027.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str. 414877]
gi|416599348|ref|ZP_11783582.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str. 366867]
gi|416604850|ref|ZP_11786471.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str. 413180]
gi|416612498|ref|ZP_11791523.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str. 446600]
gi|416618290|ref|ZP_11794533.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str.
609458-1]
gi|416628285|ref|ZP_11799498.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str.
556150-1]
gi|416641215|ref|ZP_11805362.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str. 609460]
gi|416650215|ref|ZP_11810323.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str.
507440-20]
gi|416658806|ref|ZP_11814499.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str. 556152]
gi|416666185|ref|ZP_11817336.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB101509-0077]
gi|416674184|ref|ZP_11821208.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB102109-0047]
gi|416693146|ref|ZP_11826607.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB110209-0055]
gi|416707431|ref|ZP_11832529.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB111609-0052]
gi|416714729|ref|ZP_11838047.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009083312]
gi|416716507|ref|ZP_11838854.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009085258]
gi|416725412|ref|ZP_11845782.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str.
315731156]
gi|416728241|ref|ZP_11847514.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2009159199]
gi|416738778|ref|ZP_11853536.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008282]
gi|416746688|ref|ZP_11857945.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008283]
gi|416759245|ref|ZP_11864130.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008284]
gi|416760947|ref|ZP_11865155.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008285]
gi|416770555|ref|ZP_11871894.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008287]
gi|418484315|ref|ZP_13053314.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str.
80959-06]
gi|418490862|ref|ZP_13057397.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035278]
gi|418495233|ref|ZP_13061675.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035318]
gi|418500147|ref|ZP_13066546.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035320]
gi|418501969|ref|ZP_13068345.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035321]
gi|418509786|ref|ZP_13076078.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035327]
gi|418526807|ref|ZP_13092776.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008286]
gi|418789585|ref|ZP_13345371.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19447]
gi|418795911|ref|ZP_13351609.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19449]
gi|418798178|ref|ZP_13353855.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19567]
gi|418808467|ref|ZP_13364022.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21550]
gi|418812624|ref|ZP_13368147.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Newport str. CVM 22513]
gi|418814738|ref|ZP_13370250.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21538]
gi|418819184|ref|ZP_13374638.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Newport str. CVM 22425]
gi|418833462|ref|ZP_13388386.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Newport str. CVM
N18486]
gi|418837744|ref|ZP_13392614.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Newport str. CVM N1543]
gi|418841066|ref|ZP_13395888.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21554]
gi|418846270|ref|ZP_13401042.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19443]
gi|418848375|ref|ZP_13403114.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Newport str. CVM 37978]
gi|418852434|ref|ZP_13407134.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19593]
gi|418856940|ref|ZP_13411574.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19470]
gi|418863811|ref|ZP_13418348.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19536]
gi|418868949|ref|ZP_13423390.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Newport str. CVM 4176]
gi|419728205|ref|ZP_14255172.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41579]
gi|419733089|ref|ZP_14259991.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41563]
gi|419739236|ref|ZP_14265987.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41573]
gi|419744216|ref|ZP_14270873.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41566]
gi|419748119|ref|ZP_14274619.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41565]
gi|421358411|ref|ZP_15808708.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
622731-39]
gi|421362382|ref|ZP_15812634.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
639016-6]
gi|421367581|ref|ZP_15817774.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
640631]
gi|421374068|ref|ZP_15824201.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
77-0424]
gi|421378239|ref|ZP_15828328.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607307-6]
gi|421382846|ref|ZP_15832892.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
485549-17]
gi|421387425|ref|ZP_15837424.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
596866-22]
gi|421391529|ref|ZP_15841495.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
596866-70]
gi|421395267|ref|ZP_15845206.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
629164-26]
gi|421401533|ref|ZP_15851409.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
629164-37]
gi|421402866|ref|ZP_15852720.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
639672-46]
gi|421410232|ref|ZP_15860013.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
639672-50]
gi|421412499|ref|ZP_15862253.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
77-1427]
gi|421416491|ref|ZP_15866210.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
77-2659]
gi|421421484|ref|ZP_15871152.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
78-1757]
gi|421425339|ref|ZP_15874975.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
22510-1]
gi|421432210|ref|ZP_15881787.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str. 8b-1]
gi|421434463|ref|ZP_15884012.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648905
5-18]
gi|421438945|ref|ZP_15888439.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
6-18]
gi|421446502|ref|ZP_15895914.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
50-3079]
gi|421571966|ref|ZP_16017631.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Heidelberg str.
CFSAN00322]
gi|421576172|ref|ZP_16021776.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Heidelberg str.
CFSAN00325]
gi|421578473|ref|ZP_16024047.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Heidelberg str.
CFSAN00326]
gi|421585850|ref|ZP_16031339.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Heidelberg str.
CFSAN00328]
gi|421883087|ref|ZP_16314332.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Senftenberg str. SS209]
gi|422025101|ref|ZP_16371560.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm1]
gi|422030103|ref|ZP_16376333.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm2]
gi|427547691|ref|ZP_18926873.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm8]
gi|427564941|ref|ZP_18932070.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm9]
gi|427582685|ref|ZP_18936376.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm3]
gi|427607475|ref|ZP_18941713.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm4]
gi|427630239|ref|ZP_18946135.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm6]
gi|427652932|ref|ZP_18950888.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm10]
gi|427660818|ref|ZP_18956299.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm11]
gi|427667116|ref|ZP_18961104.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm12]
gi|436604281|ref|ZP_20513237.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str. 22704]
gi|436811634|ref|ZP_20530514.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1882]
gi|436816005|ref|ZP_20533556.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1884]
gi|436839153|ref|ZP_20537473.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1594]
gi|436851600|ref|ZP_20542199.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1566]
gi|436858362|ref|ZP_20546882.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1580]
gi|436865538|ref|ZP_20551505.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1543]
gi|436875287|ref|ZP_20557194.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1441]
gi|436883587|ref|ZP_20562016.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1810]
gi|436887552|ref|ZP_20563881.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1558]
gi|436896658|ref|ZP_20569414.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1018]
gi|436906636|ref|ZP_20575482.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1010]
gi|436911413|ref|ZP_20577242.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1729]
gi|436920887|ref|ZP_20583358.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0895]
gi|436930727|ref|ZP_20588952.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0899]
gi|436935365|ref|ZP_20590805.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1457]
gi|436942554|ref|ZP_20595500.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1747]
gi|436951951|ref|ZP_20601006.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0968]
gi|436964338|ref|ZP_20605974.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1444]
gi|436974370|ref|ZP_20611039.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1445]
gi|436986561|ref|ZP_20615451.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1559]
gi|436990292|ref|ZP_20616859.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1565]
gi|437012506|ref|ZP_20625019.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1808]
gi|437020521|ref|ZP_20627332.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1811]
gi|437032101|ref|ZP_20631745.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0956]
gi|437044946|ref|ZP_20637493.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1455]
gi|437052660|ref|ZP_20642083.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1575]
gi|437057884|ref|ZP_20644731.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1725]
gi|437065639|ref|ZP_20649230.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1745]
gi|437075577|ref|ZP_20653940.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1791]
gi|437086858|ref|ZP_20660867.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1795]
gi|437090779|ref|ZP_20662887.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
576709]
gi|437113409|ref|ZP_20668729.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
635290-58]
gi|437126205|ref|ZP_20674474.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607308-16]
gi|437134298|ref|ZP_20678722.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607308-19]
gi|437141098|ref|ZP_20682942.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607307-2]
gi|437142883|ref|ZP_20683922.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607308-9]
gi|437155608|ref|ZP_20691827.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
629163]
gi|437161542|ref|ZP_20695478.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
SE15-1]
gi|437171476|ref|ZP_20700580.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CVM_N202]
gi|437177551|ref|ZP_20704031.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CVM_56-3991]
gi|437183965|ref|ZP_20707980.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CVM_76-3618]
gi|437241096|ref|ZP_20714392.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
13183-1]
gi|437260942|ref|ZP_20718012.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CVM_81-2490]
gi|437268986|ref|ZP_20722271.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str. SL909]
gi|437281771|ref|ZP_20728772.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str. SL913]
gi|437307832|ref|ZP_20735037.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
638970-15]
gi|437403999|ref|ZP_20751958.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str. 543463
22-17]
gi|437455296|ref|ZP_20760152.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str. 543463
40-18]
gi|437461555|ref|ZP_20762475.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str. 561362
1-1]
gi|437478736|ref|ZP_20767749.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str. 642044
4-1]
gi|437491878|ref|ZP_20771522.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str. 642046
4-7]
gi|437506558|ref|ZP_20775841.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648898
4-5]
gi|437541458|ref|ZP_20782502.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648899
3-17]
gi|437563744|ref|ZP_20786890.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648900
1-16]
gi|437575428|ref|ZP_20790224.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
1-17]
gi|437593366|ref|ZP_20795383.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
39-2]
gi|437600269|ref|ZP_20797233.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648902
6-8]
gi|437613478|ref|ZP_20801556.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648903
1-6]
gi|437629218|ref|ZP_20806105.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648904
3-6]
gi|437659025|ref|ZP_20811952.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str. 653049
13-19]
gi|437682520|ref|ZP_20818638.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str. 642044
8-1]
gi|437693090|ref|ZP_20821341.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str. 561362
9-7]
gi|437703867|ref|ZP_20824673.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str. 543463
42-20]
gi|437730701|ref|ZP_20831248.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
16-16]
gi|437740619|ref|ZP_20833217.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
76-2651]
gi|437934319|ref|ZP_20851297.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
6.0562-1]
gi|438056207|ref|ZP_20856470.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
50-5646]
gi|438084621|ref|ZP_20858389.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
81-2625]
gi|438104107|ref|ZP_20865811.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
62-1976]
gi|438112666|ref|ZP_20869263.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
53-407]
gi|440764459|ref|ZP_20943487.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Agona str. SH11G1113]
gi|440769393|ref|ZP_20948351.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Agona str. SH08SF124]
gi|440770868|ref|ZP_20949796.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Agona str. SH10GFN094]
gi|445134821|ref|ZP_21383056.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Gallinarum str. 9184]
gi|445141613|ref|ZP_21385554.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Dublin str. SL1438]
gi|445166071|ref|ZP_21394127.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str. SE8a]
gi|445181162|ref|ZP_21398277.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str. 20037]
gi|445224794|ref|ZP_21403583.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str. SE10]
gi|445346816|ref|ZP_21418949.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str. 13-1]
gi|445365112|ref|ZP_21425102.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str. PT23]
gi|22095800|sp|Q8ZQC0.3|KDSB_SALTY RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|75484237|sp|Q57R10.1|KDSB_SALCH RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|189028713|sp|A9N7U4.1|KDSB_SALPB RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|238690028|sp|B5F1S0.1|KDSB_SALA4 RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|238690489|sp|B5R8K5.1|KDSB_SALG2 RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|238690620|sp|B4TDQ5.1|KDSB_SALHS RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|238693587|sp|B4T152.1|KDSB_SALNS RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|238693666|sp|B4TRV0.1|KDSB_SALSV RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|254807767|sp|C0PXV5.1|KDSB_SALPC RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase;
AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid
synthase; Short=CKS; Short=CMP-KDO synthase
gi|16419500|gb|AAL19922.1| CTP:CMP-3-deoxy-D-manno-octulosonate transferase [Salmonella
enterica subsp. enterica serovar Typhimurium str. LT2]
gi|62127148|gb|AAX64851.1| CTP:CMP-3-deoxy-D-manno-octulosonate transferase [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SC-B67]
gi|161364138|gb|ABX67906.1| hypothetical protein SPAB_02526 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194404394|gb|ACF64616.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Newport str. SL254]
gi|194408193|gb|ACF68412.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL476]
gi|194455751|gb|EDX44590.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Kentucky str. CVM29188]
gi|194712102|gb|ACF91323.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
CVM19633]
gi|197211147|gb|ACH48544.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Agona str. SL483]
gi|197239874|gb|EDY22494.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA23]
gi|197289778|gb|EDY29139.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
SL480]
gi|199602143|gb|EDZ00689.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Virchow str. SL491]
gi|205271976|emb|CAR36820.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Gallinarum str. 287/91]
gi|205322453|gb|EDZ10292.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA29]
gi|205327274|gb|EDZ14038.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar 4,[5],12:i:- str.
CVM23701]
gi|205332449|gb|EDZ19213.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Kentucky str. CDC 191]
gi|205337209|gb|EDZ23973.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL486]
gi|205341454|gb|EDZ28218.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Weltevreden str.
HI_N05-537]
gi|205347696|gb|EDZ34327.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Hadar str. RI_05P066]
gi|224467325|gb|ACN45155.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Paratyphi C strain
RKS4594]
gi|261246204|emb|CBG24008.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Typhimurium str.
D23580]
gi|267992726|gb|ACY87611.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Typhimurium str.
14028S]
gi|301157531|emb|CBW17021.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Typhimurium str.
SL1344]
gi|312911974|dbj|BAJ35948.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Typhimurium str.
T000240]
gi|320085230|emb|CBY95015.1| 3-deoxy-manno-octulosonatecytidylyltransferase [Salmonella enterica
subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
gi|321223311|gb|EFX48380.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Typhimurium str.
TN061786]
gi|322616418|gb|EFY13327.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str.
315996572]
gi|322619668|gb|EFY16543.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-1]
gi|322622636|gb|EFY19481.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-3]
gi|322629785|gb|EFY26560.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-4]
gi|322632493|gb|EFY29239.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-1]
gi|322637012|gb|EFY33715.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-2]
gi|322641448|gb|EFY38086.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str. 531954]
gi|322646086|gb|EFY42602.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str.
NC_MB110209-0054]
gi|322654086|gb|EFY50409.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str.
CASC_09SCPH15965]
gi|322658618|gb|EFY54880.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str. 19N]
gi|322663475|gb|EFY59677.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str.
81038-01]
gi|322670211|gb|EFY66351.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str.
MD_MDA09249507]
gi|322671447|gb|EFY67569.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str. 414877]
gi|322676803|gb|EFY72870.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str. 366867]
gi|322682728|gb|EFY78747.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str. 413180]
gi|322686407|gb|EFY82389.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str. 446600]
gi|322713982|gb|EFZ05553.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SCSA50]
gi|323129253|gb|ADX16683.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Typhimurium str.
ST4/74]
gi|323195930|gb|EFZ81097.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str.
609458-1]
gi|323199782|gb|EFZ84871.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str.
556150-1]
gi|323202775|gb|EFZ87811.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str. 609460]
gi|323211522|gb|EFZ96361.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str. 556152]
gi|323217993|gb|EGA02708.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB101509-0077]
gi|323222905|gb|EGA07255.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB102109-0047]
gi|323226599|gb|EGA10804.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB110209-0055]
gi|323229795|gb|EGA13918.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB111609-0052]
gi|323233020|gb|EGA17116.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009083312]
gi|323240755|gb|EGA24797.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009085258]
gi|323243071|gb|EGA27092.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str.
315731156]
gi|323249766|gb|EGA33668.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2009159199]
gi|323252761|gb|EGA36599.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008282]
gi|323257196|gb|EGA40897.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008283]
gi|323259998|gb|EGA43626.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008284]
gi|323268001|gb|EGA51480.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008285]
gi|323269849|gb|EGA53298.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008287]
gi|326627239|gb|EGE33582.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Gallinarum str. SG9]
gi|332987879|gb|AEF06862.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Typhimurium str. UK-1]
gi|353075387|gb|EHB41147.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Infantis str. SARB27]
gi|363553154|gb|EHL37418.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str. LQC 10]
gi|363565469|gb|EHL49502.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str. SARB30]
gi|363573549|gb|EHL57428.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str. 4441 H]
gi|366058895|gb|EHN23174.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str.
80959-06]
gi|366059089|gb|EHN23363.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035318]
gi|366064412|gb|EHN28610.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035278]
gi|366069614|gb|EHN33737.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035320]
gi|366076416|gb|EHN40454.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035321]
gi|366077881|gb|EHN41890.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035327]
gi|366828398|gb|EHN55285.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str.
507440-20]
gi|372205415|gb|EHP18930.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008286]
gi|379987363|emb|CCF86605.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Senftenberg str. SS209]
gi|380462548|gb|AFD57951.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Typhimurium str. 798]
gi|381299754|gb|EIC40823.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41573]
gi|381300355|gb|EIC41418.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41579]
gi|381301761|gb|EIC42815.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41563]
gi|381309321|gb|EIC50158.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41566]
gi|381315557|gb|EIC56318.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41565]
gi|383797897|gb|AFH44979.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Heidelberg str. B182]
gi|392757801|gb|EJA14684.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19449]
gi|392759930|gb|EJA16770.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19447]
gi|392766835|gb|EJA23607.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19567]
gi|392776044|gb|EJA32734.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Newport str. CVM 22513]
gi|392776655|gb|EJA33342.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21550]
gi|392793930|gb|EJA50364.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21538]
gi|392795276|gb|EJA51652.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Newport str. CVM 22425]
gi|392795500|gb|EJA51868.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Newport str. CVM
N18486]
gi|392798102|gb|EJA54389.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Newport str. CVM N1543]
gi|392809200|gb|EJA65238.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21554]
gi|392810556|gb|EJA66569.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19443]
gi|392823687|gb|EJA79483.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Newport str. CVM 37978]
gi|392829257|gb|EJA84936.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19593]
gi|392832284|gb|EJA87906.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19536]
gi|392835565|gb|EJA91158.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19470]
gi|392837639|gb|EJA93209.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Newport str. CVM 4176]
gi|395986101|gb|EJH95265.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
640631]
gi|395986851|gb|EJH96014.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
622731-39]
gi|395990206|gb|EJH99337.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
639016-6]
gi|395994682|gb|EJI03752.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
77-0424]
gi|395997544|gb|EJI06585.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607307-6]
gi|395997954|gb|EJI06994.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
485549-17]
gi|396008250|gb|EJI17184.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
596866-22]
gi|396010492|gb|EJI19404.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
596866-70]
gi|396014004|gb|EJI22891.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
629164-26]
gi|396021598|gb|EJI30424.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
629164-37]
gi|396022365|gb|EJI31178.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
639672-50]
gi|396029897|gb|EJI38632.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
639672-46]
gi|396039587|gb|EJI48211.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
77-1427]
gi|396040799|gb|EJI49422.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
78-1757]
gi|396044668|gb|EJI53263.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
77-2659]
gi|396051461|gb|EJI59979.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str. 8b-1]
gi|396057809|gb|EJI66279.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
22510-1]
gi|396060214|gb|EJI68660.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648905
5-18]
gi|396062084|gb|EJI70497.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
50-3079]
gi|396072173|gb|EJI80488.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
6-18]
gi|402518820|gb|EJW26190.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Heidelberg str.
CFSAN00322]
gi|402519628|gb|EJW26989.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Heidelberg str.
CFSAN00325]
gi|402523986|gb|EJW31291.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Heidelberg str.
CFSAN00326]
gi|402529258|gb|EJW36496.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Heidelberg str.
CFSAN00328]
gi|414021985|gb|EKT05491.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm8]
gi|414022154|gb|EKT05649.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm1]
gi|414023620|gb|EKT07042.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm2]
gi|414034317|gb|EKT17247.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm9]
gi|414037302|gb|EKT20085.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm3]
gi|414039138|gb|EKT21824.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm4]
gi|414050607|gb|EKT32777.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm10]
gi|414051549|gb|EKT33639.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm6]
gi|414054592|gb|EKT36533.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm11]
gi|414060308|gb|EKT41827.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm12]
gi|434964265|gb|ELL57287.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1882]
gi|434972639|gb|ELL65077.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str. 22704]
gi|434974121|gb|ELL66509.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1884]
gi|434980461|gb|ELL72382.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1594]
gi|434986902|gb|ELL78553.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1566]
gi|434990514|gb|ELL82064.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1580]
gi|434994878|gb|ELL86195.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1441]
gi|434996573|gb|ELL87889.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1543]
gi|435002032|gb|ELL93121.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1810]
gi|435009262|gb|ELM00048.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1558]
gi|435015213|gb|ELM05770.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1010]
gi|435016547|gb|ELM07073.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1018]
gi|435025658|gb|ELM15789.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1729]
gi|435027009|gb|ELM17138.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0895]
gi|435032382|gb|ELM22326.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0899]
gi|435038203|gb|ELM27984.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1457]
gi|435042753|gb|ELM32470.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1747]
gi|435048195|gb|ELM37760.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1444]
gi|435052418|gb|ELM41920.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0968]
gi|435052885|gb|ELM42359.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1445]
gi|435061323|gb|ELM50551.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1559]
gi|435063826|gb|ELM52974.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1808]
gi|435070449|gb|ELM59433.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1565]
gi|435079149|gb|ELM67860.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1811]
gi|435080037|gb|ELM68730.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0956]
gi|435080765|gb|ELM69433.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1455]
gi|435091260|gb|ELM79661.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1575]
gi|435093697|gb|ELM82036.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1725]
gi|435099314|gb|ELM87522.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1745]
gi|435103004|gb|ELM91107.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1795]
gi|435104874|gb|ELM92911.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1791]
gi|435113813|gb|ELN01645.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
576709]
gi|435116373|gb|ELN04111.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
635290-58]
gi|435117286|gb|ELN04998.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607308-16]
gi|435119777|gb|ELN07379.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607308-19]
gi|435128802|gb|ELN16128.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607307-2]
gi|435138476|gb|ELN25503.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
629163]
gi|435141785|gb|ELN28716.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607308-9]
gi|435144599|gb|ELN31431.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
SE15-1]
gi|435145998|gb|ELN32792.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CVM_N202]
gi|435155231|gb|ELN41789.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CVM_56-3991]
gi|435162023|gb|ELN48229.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CVM_76-3618]
gi|435163398|gb|ELN49534.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CVM_81-2490]
gi|435168389|gb|ELN54221.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str. SL913]
gi|435172636|gb|ELN58163.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str. SL909]
gi|435179099|gb|ELN64257.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
13183-1]
gi|435186346|gb|ELN71188.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
638970-15]
gi|435205698|gb|ELN89280.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str. 543463
22-17]
gi|435207491|gb|ELN90948.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str. 543463
40-18]
gi|435219978|gb|ELO02296.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str. 561362
1-1]
gi|435221555|gb|ELO03828.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str. 642044
4-1]
gi|435228983|gb|ELO10379.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str. 642046
4-7]
gi|435234749|gb|ELO15603.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648898
4-5]
gi|435236374|gb|ELO17116.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648899
3-17]
gi|435236755|gb|ELO17475.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648900
1-16]
gi|435245393|gb|ELO25480.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
1-17]
gi|435252365|gb|ELO31926.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
39-2]
gi|435262545|gb|ELO41634.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648902
6-8]
gi|435264413|gb|ELO43330.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648903
1-6]
gi|435269777|gb|ELO48294.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str. 642044
8-1]
gi|435270077|gb|ELO48581.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str. 653049
13-19]
gi|435279465|gb|ELO57240.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str. 561362
9-7]
gi|435284556|gb|ELO62005.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648904
3-6]
gi|435289322|gb|ELO66296.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
16-16]
gi|435293245|gb|ELO69953.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str. 543463
42-20]
gi|435310801|gb|ELO85150.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
6.0562-1]
gi|435313583|gb|ELO87207.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
76-2651]
gi|435315099|gb|ELO88388.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
50-5646]
gi|435319637|gb|ELO92446.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
81-2625]
gi|435322488|gb|ELO94761.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
62-1976]
gi|435330744|gb|ELP02010.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
53-407]
gi|436414481|gb|ELP12409.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Agona str. SH08SF124]
gi|436416609|gb|ELP14514.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Agona str. SH11G1113]
gi|436423440|gb|ELP21251.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Agona str. SH10GFN094]
gi|444846524|gb|ELX71692.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Gallinarum str. 9184]
gi|444850644|gb|ELX75742.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Dublin str. SL1438]
gi|444866407|gb|ELX91136.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str. SE8a]
gi|444868369|gb|ELX93012.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str. SE10]
gi|444871752|gb|ELX96147.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str. 20037]
gi|444877655|gb|ELY01795.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str. 13-1]
gi|444882925|gb|ELY06839.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str. PT23]
Length = 248
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/246 (40%), Positives = 142/246 (57%), Gaps = 7/246 (2%)
Query: 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG 110
V IIPARF+S+R GKPLV+I GKPMI ER++ + + ++VATD E +A + G
Sbjct: 4 VVIIPARFSSTRLPGKPLVDINGKPMIVHVLERAR-ESGAERIIVATDHEDVARAVEAAG 62
Query: 111 ADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169
+V MT ++GTER E ++K D ++VN+QGDEP+I II V + L
Sbjct: 63 GEVCMTRADHQSGTERLAEVVEKCGFSDDTVIVNVQGDEPMIPAVIIRQVAENLAQRQVG 122
Query: 170 VFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPY----LLHL 225
+ + AV E+AF+PN VK V+D GYA+YFSR IP+++ L HL
Sbjct: 123 MATLAVPIHSAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAKSLETVGDTCLRHL 182
Query: 226 GIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEK 284
GI Y + F++ Y P+PL+ E LEQL+VL G K+ V + GVD +D+E+
Sbjct: 183 GIYGYRAGFIRRYVSWQPSPLEHIEMLEQLRVLWYGEKIHVAVAKAVPGTGVDTADDLER 242
Query: 285 IESFMR 290
+ + MR
Sbjct: 243 VRAEMR 248
>gi|403058218|ref|YP_006646435.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pectobacterium
carotovorum subsp. carotovorum PCC21]
gi|402805544|gb|AFR03182.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Pectobacterium
carotovorum subsp. carotovorum PCC21]
Length = 250
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/243 (40%), Positives = 139/243 (57%), Gaps = 7/243 (2%)
Query: 53 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGAD 112
IIPARFASSR GKPL +I GKPM+ ER+ L + ++VATD + QQ G +
Sbjct: 6 IIPARFASSRLPGKPLADINGKPMVVHVMERA-LESGAQRVIVATDHPDVEAAVQQAGGE 64
Query: 113 VIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171
V +T +GTER E +++ DI+VN+QGDEPLI II V + L A+ +
Sbjct: 65 VCLTRADHNSGTERLAEVIERYGFTDDDIIVNVQGDEPLIPSVIIRQVAENLAASKAGMA 124
Query: 172 STAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK----SGKVNPQFPYLLHLGI 227
+ AV E+AF+PN VK V D GYA+YFSR IP+++ K +L H+GI
Sbjct: 125 TLAVPIETSEEAFNPNAVKVVTDAEGYALYFSRATIPWDRERFAQSKETIGDHFLRHIGI 184
Query: 228 QSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKIE 286
+Y + F++ Y P+ L+ E LEQL+VL G K+ V + + GVD PED+ ++
Sbjct: 185 YAYRAGFVRRYVSWAPSQLEQIELLEQLRVLWYGEKIHVAVAKAIPSVGVDTPEDLARVR 244
Query: 287 SFM 289
M
Sbjct: 245 QVM 247
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.134 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,699,421,001
Number of Sequences: 23463169
Number of extensions: 198310752
Number of successful extensions: 575725
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3269
Number of HSP's successfully gapped in prelim test: 554
Number of HSP's that attempted gapping in prelim test: 563812
Number of HSP's gapped (non-prelim): 3868
length of query: 295
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 154
effective length of database: 9,050,888,538
effective search space: 1393836834852
effective search space used: 1393836834852
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 76 (33.9 bits)