Query 022556
Match_columns 295
No_of_seqs 130 out of 1138
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 07:24:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022556.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022556hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gp6_A Leucoanthocyanidin diox 100.0 3.7E-68 1.3E-72 488.0 25.4 284 10-295 13-317 (356)
2 3oox_A Putative 2OG-Fe(II) oxy 100.0 1.4E-65 4.9E-70 463.5 23.2 257 35-295 4-280 (312)
3 1w9y_A 1-aminocyclopropane-1-c 100.0 7.1E-64 2.4E-68 453.0 20.4 249 36-295 2-262 (319)
4 1odm_A Isopenicillin N synthas 100.0 1E-61 3.5E-66 441.6 21.7 250 36-295 7-297 (331)
5 3on7_A Oxidoreductase, iron/as 100.0 2E-60 7E-65 423.2 23.2 237 37-294 3-262 (280)
6 1dcs_A Deacetoxycephalosporin 100.0 2.8E-60 9.5E-65 428.5 20.4 241 34-293 1-274 (311)
7 2hbt_A EGL nine homolog 1; pro 87.9 7.8 0.00027 32.7 11.9 184 55-285 14-212 (247)
8 2iuw_A Alkylated repair protei 85.3 3.2 0.00011 34.9 8.1 83 196-284 127-228 (238)
9 3dkq_A PKHD-type hydroxylase S 84.9 3.9 0.00013 34.5 8.4 81 195-287 99-196 (243)
10 2rg4_A Uncharacterized protein 79.5 19 0.00065 29.5 10.6 42 243-288 167-209 (216)
11 3s57_A Alpha-ketoglutarate-dep 77.0 6.5 0.00022 32.1 6.9 80 197-282 102-199 (204)
12 2dbn_A Hypothetical protein YB 63.3 2.5 8.5E-05 39.0 1.5 55 34-94 97-151 (461)
13 3i3q_A Alpha-ketoglutarate-dep 55.6 17 0.00059 29.8 5.2 80 196-283 106-200 (211)
14 1m5a_B Insulin B chain; alpha 49.8 16 0.00056 20.0 2.7 18 55-72 10-27 (30)
15 3o2g_A Gamma-butyrobetaine dio 46.6 13 0.00043 33.6 3.3 52 37-95 122-173 (388)
16 3itq_A Prolyl 4-hydroxylase, a 45.0 69 0.0024 26.1 7.3 99 170-286 94-212 (216)
17 1otj_A Alpha-ketoglutarate-dep 43.8 19 0.00066 30.5 3.9 50 36-93 16-65 (283)
18 3tht_A Alkylated DNA repair pr 38.5 31 0.0011 30.5 4.4 68 196-271 199-272 (345)
19 1oih_A Putative alkylsulfatase 36.9 30 0.001 29.6 4.0 51 36-94 26-77 (301)
20 2opi_A L-fuculose-1-phosphate 36.8 20 0.00068 29.2 2.7 36 37-77 125-160 (212)
21 3r1j_A Alpha-ketoglutarate-dep 33.8 37 0.0013 29.3 4.1 52 36-95 20-72 (301)
22 2fk5_A Fuculose-1-phosphate al 32.7 39 0.0013 27.2 3.8 51 37-92 117-176 (200)
23 3pvj_A Alpha-ketoglutarate-dep 32.6 30 0.001 29.4 3.3 51 36-94 14-64 (277)
24 1e4c_P L-fuculose 1-phosphate 32.5 22 0.00075 29.0 2.3 36 37-77 122-157 (215)
25 1pvt_A Sugar-phosphate aldolas 31.3 35 0.0012 28.3 3.4 51 35-90 159-211 (238)
26 2da7_A Zinc finger homeobox pr 29.0 25 0.00084 23.5 1.6 40 151-190 14-53 (71)
27 2jig_A Prolyl-4 hydroxylase; h 27.3 1.8E+02 0.0063 23.3 7.2 40 244-287 170-218 (224)
28 4ay7_A Methylcobalamin\: coenz 26.2 1.1E+02 0.0037 26.7 5.9 41 54-94 304-348 (348)
29 2v9l_A Rhamnulose-1-phosphate 24.5 37 0.0013 28.8 2.4 50 36-90 178-229 (274)
30 2rdq_A 1-deoxypentalenic acid 23.7 86 0.0029 26.2 4.6 36 58-94 22-57 (288)
31 3ghf_A Septum site-determining 23.5 1E+02 0.0035 22.5 4.4 39 37-80 47-86 (120)
32 2x4k_A 4-oxalocrotonate tautom 21.9 82 0.0028 19.1 3.2 23 163-185 18-40 (63)
33 2do1_A Nuclear protein HCC-1; 21.8 1E+02 0.0035 19.3 3.5 39 40-90 7-45 (55)
34 1y66_A Engrailed homeodomain; 20.9 1.1E+02 0.0037 18.0 3.1 37 153-189 8-44 (52)
35 1v7z_A Creatininase, creatinin 20.7 1.6E+02 0.0055 24.5 5.7 37 51-87 93-132 (260)
36 3ocr_A Class II aldolase/adduc 20.7 42 0.0015 28.5 2.0 50 36-89 155-206 (273)
37 3m0z_A Putative aldolase; MCSG 20.6 1.1E+02 0.0038 25.4 4.3 38 52-90 171-209 (249)
38 3abf_A 4-oxalocrotonate tautom 20.5 82 0.0028 19.4 3.0 22 164-185 17-38 (64)
39 2j01_J 50S ribosomal protein L 20.5 2.1E+02 0.0073 22.2 6.0 39 52-90 5-45 (173)
40 1zav_A 50S ribosomal protein L 20.4 2.1E+02 0.0072 22.3 6.0 40 52-91 7-47 (180)
41 2opw_A Phyhd1 protein; double- 20.2 1E+02 0.0034 25.9 4.3 36 59-95 7-42 (291)
No 1
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=3.7e-68 Score=488.01 Aligned_cols=284 Identities=28% Similarity=0.513 Sum_probs=248.2
Q ss_pred cCCCCCCccccCCCCCCCcccc---CC---CCCCCceeecCCCCCC-cchHHHHHHHHHHHhHhccEEEEeeCCCCHHHH
Q 022556 10 AGEKTLNPSFVRFQDERPKVAY---NE---FSNEIPVISLAGIDDV-GGKRAEICKKIVEACEDWGIFQVVDHGVDAKLI 82 (295)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~---~~---~~~~iPvIDls~l~~~-~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~ 82 (295)
++++.+|++|++|..+++.... .. .+.+||||||+.|.++ ++++++++++|.+||++||||||+||||+.+++
T Consensus 13 ~~~~~vP~~~~~p~~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~ 92 (356)
T 1gp6_A 13 SGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLINHGIPADLM 92 (356)
T ss_dssp TTCSSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEESCSCCHHHH
T ss_pred cCCCCCCHHhcCCchhcccccccccccccccCCCCCEEEchhccCCChHHHHHHHHHHHHHHHhCCEEEEeCCCCCHHHH
Confidence 4689999999999877664221 00 1346999999999753 345778999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCHhhhcccccCCC--CccceeeecccCCCcccchhhhhhhcccCCCCCCCCCCCCCCcchHHHHHHH
Q 022556 83 SDMTRLATEFFALPPEEKLKFDMSGG--KKGGFIVSSHLQGEVVKDWREIVTYFSFPKQSRDYSRWPDKPEGWMEVTKEY 160 (295)
Q Consensus 83 ~~~~~~~~~fF~lp~e~K~~~~~~~~--~~~Gy~~~~~~~~~~~~d~~e~~~~~~~~~~~~~~~~wP~~~~~fr~~~~~y 160 (295)
+++++.+++||+||.|+|+++..... ..+||.........+..||+|.|.+...+......|.||..+|+||+.+++|
T Consensus 93 ~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~~~p~~~~~~~~wP~~~~~fr~~~~~y 172 (356)
T 1gp6_A 93 ERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEY 172 (356)
T ss_dssp HHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCCSSTTHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccCCCCCCChhheeeeecCCccccccccCCCcchhhhHHHHHH
Confidence 99999999999999999999976543 5688865433334567899999987665544346789999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCChHHHHHHhc---CCCceeEeeccCCCCCCCCcccccccccCCceEEEecCCCCceeEe
Q 022556 161 SDKLMGVACKLLEVLSEAMGLEKEALTKACV---DMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQAT 237 (295)
Q Consensus 161 ~~~~~~l~~~ll~~l~~~Lgl~~~~~~~~~~---~~~~~lrl~~Yp~~~~~~~~~g~~~HtD~g~lTlL~q~~~~GLqV~ 237 (295)
+++|.+++..|+++|+++||+++++|.+.+. ...+.+|++|||+++.++..+|+++|||+|+||||+|+.++||||+
T Consensus 173 ~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLQV~ 252 (356)
T 1gp6_A 173 AKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLF 252 (356)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEEEECSCCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcccCCccceeeeeecCCCCCcccccCcCCccCCCeEEEEEEcCCCCeEEe
Confidence 9999999999999999999999999999887 4678899999999998888899999999999999999999999999
Q ss_pred eCCCCCeEeecCCCCcEEEEcchHHHHhhCCCcccc--------ccceeeEEEEeeeCCCc-ceecC
Q 022556 238 KDNGKTWITVQPIEGAFVVNLGDHGHVSIYANTALI--------FLFLFILFYCFCLNHDV-VLSRL 295 (295)
Q Consensus 238 ~~~g~~W~~V~~~~g~~vVnvGd~L~~~TnG~~~a~--------~~~R~S~~~F~~p~~d~-~i~~l 295 (295)
+++ +|++|+|.+|++||||||+||+||||++||+ ..+|||++||++|+.|+ +|+||
T Consensus 253 ~~g--~Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~~i~pl 317 (356)
T 1gp6_A 253 YEG--KWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPL 317 (356)
T ss_dssp ETT--EEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCC
T ss_pred cCC--cEEECcCCCCeEEEEeccHHHHhcCCEeeccCceecCCCCCCEEEEEEeecCCCCCcEEeCC
Confidence 754 8999999999999999999999999999999 56899999999999999 99986
No 2
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=100.00 E-value=1.4e-65 Score=463.55 Aligned_cols=257 Identities=22% Similarity=0.314 Sum_probs=224.3
Q ss_pred CCCCceeecCCCCCCcchHHHHHHHHHHHhHhccEEEEeeCCCCHHHHHHHHHHHHHHhcCCHhhhcccccCCCCcccee
Q 022556 35 SNEIPVISLAGIDDVGGKRAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKFDMSGGKKGGFI 114 (295)
Q Consensus 35 ~~~iPvIDls~l~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~~Gy~ 114 (295)
+.+||||||+.+.+ ++++++++|.+||+++|||||+||||+.++++++++.+++||+||.|+|+++.......+||.
T Consensus 4 ~~~iPvIDls~~~~---~~~~~~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~Gy~ 80 (312)
T 3oox_A 4 TSAIDPVSFSLYAK---DFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGVKGGARGYI 80 (312)
T ss_dssp CCSSCCEETHHHHH---CHHHHHHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSSGGGTSEEE
T ss_pred CCCCCeEEChHhcc---cHHHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccCCCCccccc
Confidence 35699999998752 567889999999999999999999999999999999999999999999999986544568896
Q ss_pred eecc--cCCCcccchhhhhhhccc-CCC-----CCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHH
Q 022556 115 VSSH--LQGEVVKDWREIVTYFSF-PKQ-----SRDYSRWPDKPEGWMEVTKEYSDKLMGVACKLLEVLSEAMGLEKEAL 186 (295)
Q Consensus 115 ~~~~--~~~~~~~d~~e~~~~~~~-~~~-----~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~~~ 186 (295)
.... ..+....||+|.|.+... +.. ...+|.||..+|+||+.+++|+++|.+++..|+++|+++||+++++|
T Consensus 81 ~~g~e~~~~~~~~D~kE~~~~~~~~~~~~~~~~~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f 160 (312)
T 3oox_A 81 PFGVETAKGADHYDLKEFWHMGRDLPPGHRFRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLERDFF 160 (312)
T ss_dssp CCCCCCSTTSCSCCCCEEEEECCCCCTTCGGGGTSCCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTT
T ss_pred cccceecCCCCCCCceeeeEeecCCCcCCcchhccCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHH
Confidence 4322 223456899999876432 111 12468999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCceeEeeccCCCCCCCCcccccccccCCceEEEecCCCCceeEeeCCCCCeEeecCCCCcEEEEcchHHHHhh
Q 022556 187 TKACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATKDNGKTWITVQPIEGAFVVNLGDHGHVSI 266 (295)
Q Consensus 187 ~~~~~~~~~~lrl~~Yp~~~~~~~~~g~~~HtD~g~lTlL~q~~~~GLqV~~~~g~~W~~V~~~~g~~vVnvGd~L~~~T 266 (295)
.+.+..+.+.+|++||||++.++..+|+++|||+|+||||+|+.++||||+.++| +|++|+|+||++||||||+||+||
T Consensus 161 ~~~~~~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLqV~~~~g-~W~~V~p~pg~~vVNiGD~l~~~T 239 (312)
T 3oox_A 161 KPTVQDGNSVLRLLHYPPIPKDATGVRAGAHGDINTITLLLGAEEGGLEVLDRDG-QWLPINPPPGCLVINIGDMLERLT 239 (312)
T ss_dssp HHHHTTCCCEEEEEEECCCSSCCC--CEEEECCCSSEEEEECCTTSCEEEECTTS-CEEECCCCSSCEEEEECHHHHHHT
T ss_pred HHHhcCCcceeeeEecCCCCCCcCCcCccceecCceEEEEeEcCcCceEEECCCC-cEEECCCCCCeEEEEhHHHHHHHh
Confidence 9999888899999999999876545999999999999999999999999998876 899999999999999999999999
Q ss_pred CCCcccc------------ccceeeEEEEeeeCCCcceecC
Q 022556 267 YANTALI------------FLFLFILFYCFCLNHDVVLSRL 295 (295)
Q Consensus 267 nG~~~a~------------~~~R~S~~~F~~p~~d~~i~~l 295 (295)
||++||+ ..+|||++||++|+.|++|+||
T Consensus 240 nG~~kS~~HRVv~~~~~~~~~~R~Sia~F~~P~~d~~i~pl 280 (312)
T 3oox_A 240 NNVLPSTVHRVVNPPPERRGVPRYSTPFFLHFASDYEIKTL 280 (312)
T ss_dssp TTSSCCCCEEECCCCGGGTTSCEEECCEEECCCTTCEECCC
T ss_pred CCeecCCCceEeCCCccCCCCCEEEEEEEecCCCCcEEecC
Confidence 9999999 2359999999999999999986
No 3
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=100.00 E-value=7.1e-64 Score=453.01 Aligned_cols=249 Identities=32% Similarity=0.529 Sum_probs=221.4
Q ss_pred CCCceeecCCCCCCcchHHHHHHHHHHHhHhccEEEEeeCCCCHHHHHHHHHHHHHHhcCCHhhhcccccCCCCccceee
Q 022556 36 NEIPVISLAGIDDVGGKRAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKFDMSGGKKGGFIV 115 (295)
Q Consensus 36 ~~iPvIDls~l~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~~Gy~~ 115 (295)
.+||||||+.+. +.++++++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++... .+||..
T Consensus 2 ~~iPvIDls~l~--~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~~---~~Gy~~ 76 (319)
T 1w9y_A 2 ENFPIISLDKVN--GVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVA---SKALEG 76 (319)
T ss_dssp CCCCEEEGGGGG--STTHHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHTT
T ss_pred CCCCEEECcccC--cccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccC---CCCCCc
Confidence 469999999985 245788999999999999999999999999999999999999999999999998643 246653
Q ss_pred ecccCCCcccchhhhhhhcccCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhcC---
Q 022556 116 SSHLQGEVVKDWREIVTYFSFPKQSRDYSRWPDKPEGWMEVTKEYSDKLMGVACKLLEVLSEAMGLEKEALTKACVD--- 192 (295)
Q Consensus 116 ~~~~~~~~~~d~~e~~~~~~~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~~~~~~~~~--- 192 (295)
... ..+..||+|.|.+...|. ...|.||..+|+||+.+++|+++|.+++..|+++|+++||+++++|.+.+..
T Consensus 77 ~~~--e~~~~d~ke~~~~~~~p~--~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~ 152 (319)
T 1w9y_A 77 VQA--EVTDMDWESTFFLKHLPI--SNISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKG 152 (319)
T ss_dssp CCC--CGGGCCCCEEEEEEEESC--CGGGGCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHHHHTTTC
T ss_pred ccc--cCCCCChhhheeeecCCc--ccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCcCC
Confidence 311 235679999988765443 3468999999999999999999999999999999999999999999998863
Q ss_pred CCceeEeeccCCCCCCCCcccccccccCCceEEEecC-CCCceeEeeCCCCCeEeecCCCCcEEEEcchHHHHhhCCCcc
Q 022556 193 MDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQD-QVGGLQATKDNGKTWITVQPIEGAFVVNLGDHGHVSIYANTA 271 (295)
Q Consensus 193 ~~~~lrl~~Yp~~~~~~~~~g~~~HtD~g~lTlL~q~-~~~GLqV~~~~g~~W~~V~~~~g~~vVnvGd~L~~~TnG~~~ 271 (295)
..+.+|++|||+++.++...|+++|||+|+||||+|| .++||||+.++ +|++|+|.||++||||||+||+||||++|
T Consensus 153 ~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~~v~GLQV~~~g--~Wi~V~p~pgalvVNiGD~l~~~SnG~~k 230 (319)
T 1w9y_A 153 PNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDG--QWIDVPPMRHSIVVNLGDQLEVITNGKYK 230 (319)
T ss_dssp CEEEEEEEECCCCSCGGGGSSCCCBCCSSSEEEEEESSSCCCEEEEETT--EEEECCCCTTCEEEEECHHHHHHTTTSSC
T ss_pred ccceeEEEecCCCcccccccccccccCCCceEEEEecCCCCeeeEeeCC--eEEEcccCCCcEEEEhHHHHHHHhCCeee
Confidence 5578999999999988788999999999999999995 79999998654 89999999999999999999999999999
Q ss_pred cc--------ccceeeEEEEeeeCCCcceecC
Q 022556 272 LI--------FLFLFILFYCFCLNHDVVLSRL 295 (295)
Q Consensus 272 a~--------~~~R~S~~~F~~p~~d~~i~~l 295 (295)
|+ ..+|||++||++|+.|++|+||
T Consensus 231 S~~HRVv~~~~~~R~Sia~F~~p~~d~~i~pl 262 (319)
T 1w9y_A 231 SVMHRVIAQKDGARMSLASFYNPGSDAVIYPA 262 (319)
T ss_dssp CCCEEECCCSSSCCEEEEEEEECCTTCEECCC
T ss_pred cccceecCCCCCCceEEEEEecCCCCCeEeCc
Confidence 99 5689999999999999999986
No 4
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=100.00 E-value=1e-61 Score=441.57 Aligned_cols=250 Identities=20% Similarity=0.307 Sum_probs=219.3
Q ss_pred CCCceeecCCCCCC-cchHHHHHHHHHHHhHhccEEEEeeCCCCHHHHHHHHHHHHHH-hcCCHhhhcccccCCCCccce
Q 022556 36 NEIPVISLAGIDDV-GGKRAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEF-FALPPEEKLKFDMSGGKKGGF 113 (295)
Q Consensus 36 ~~iPvIDls~l~~~-~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~f-F~lp~e~K~~~~~~~~~~~Gy 113 (295)
.+||||||+.|.++ ++++++++++|.+||++||||||+|||| +++++++.+++| |+||.|+|+++.. +||
T Consensus 7 ~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi---l~~~~~~~~~~F~F~lP~eeK~~~~~-----~Gy 78 (331)
T 1odm_A 7 ANVPKIDVSPLFGDDQAAKMRVAQQIDAASRDTGFFYAVNHGI---NVQRLSQKTKEFHMSITPEEKWDLAI-----RAY 78 (331)
T ss_dssp CCCCEEECGGGGSSCHHHHHHHHHHHHHHHHTTSEEEEESCCC---CHHHHHHHHHHHHHHCCHHHHHHHBC-----TTT
T ss_pred CCCCEEEchHhcCCChHHHHHHHHHHHHHHHhCCEEEEEccce---eHHHHHHHHHhccCCCCHHHHHhhhh-----cCC
Confidence 46999999998643 3567889999999999999999999999 899999999999 9999999999975 566
Q ss_pred eeecc--cCC------CcccchhhhhhhcccCCC----------CCCCCCCCCC--CcchHHHHHHHHHHHHHHHHHHHH
Q 022556 114 IVSSH--LQG------EVVKDWREIVTYFSFPKQ----------SRDYSRWPDK--PEGWMEVTKEYSDKLMGVACKLLE 173 (295)
Q Consensus 114 ~~~~~--~~~------~~~~d~~e~~~~~~~~~~----------~~~~~~wP~~--~~~fr~~~~~y~~~~~~l~~~ll~ 173 (295)
..... ... ....||+|.|.+...... ...+|.||.. +|+||+.+++|+++|.+++..|++
T Consensus 79 ~~~~~e~~~~~~~~~~~~~~d~kE~~~~~~~~~~~~p~~~~~~~~~~~n~wP~~~~~p~fr~~~~~y~~~~~~l~~~ll~ 158 (331)
T 1odm_A 79 NKEHQDQVRAGYYLSIPGKKAVESFCYLNPNFTPDHPRIQAKTPTHEVNVWPDETKHPGFQDFAEQYYWDVFGLSSALLK 158 (331)
T ss_dssp CTTCTTCSSSEEECCBTTTBCCEEEEECCTTCCTTSHHHHTTCTTCCCCCCCCTTTSTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCccccccccccccCCCCChhheEecccCCccccccccccccccCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 43221 111 146799999987643211 1347999987 999999999999999999999999
Q ss_pred HHHHhcCCChHHHHHHhcCCCceeE--eeccC------C---CCCCCC-cccccccccCCceEEEecCCCCceeEeeCCC
Q 022556 174 VLSEAMGLEKEALTKACVDMDQKIV--VNYYP------K---CPQPDL-TLGLKRHTDPGTITLLLQDQVGGLQATKDNG 241 (295)
Q Consensus 174 ~l~~~Lgl~~~~~~~~~~~~~~~lr--l~~Yp------~---~~~~~~-~~g~~~HtD~g~lTlL~q~~~~GLqV~~~~g 241 (295)
+|+++||+++++|.+.+..+.+.+| ++||| + ++.++. .+|+++|||+|+||||+|+.++||||++++|
T Consensus 159 ~la~~Lgl~~~~f~~~~~~~~~~lr~~l~~YP~~~~~~p~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLQV~~~~g 238 (331)
T 1odm_A 159 GYALALGKEENFFARHFKPDDTLASVVLIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVSLITVLYQSNVQNLQVETAAG 238 (331)
T ss_dssp HHHHHTTSCTTTTGGGCCTTTCCCEEEEEEECCCSSCCGGGCEECTTSCEEEEEEECCSSSEEEEEECSSCCEEEEETTE
T ss_pred HHHHHhCCCHHHHHHHhcCcHHHHHHHHhhCCCcccccccccCCCccccccccccccCCCeEEEEeeCCCCCEEEEcCCC
Confidence 9999999999999999888889999 99999 7 555555 7899999999999999999999999998874
Q ss_pred CCeEeecCCCCcEEEEcchHHHHhhCCCcccc-------ccceeeEEEEeeeCCCcceecC
Q 022556 242 KTWITVQPIEGAFVVNLGDHGHVSIYANTALI-------FLFLFILFYCFCLNHDVVLSRL 295 (295)
Q Consensus 242 ~~W~~V~~~~g~~vVnvGd~L~~~TnG~~~a~-------~~~R~S~~~F~~p~~d~~i~~l 295 (295)
|++|+|+||++||||||+||+||||++||+ ..+|||++||++|+.|++|+||
T Consensus 239 --Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~~R~Sia~F~~P~~d~~i~pl 297 (331)
T 1odm_A 239 --YQDIEADDTGYLINCGSYMAHLTNNYYKAPIHRVKWVNAERQSLPFFVNLGYDSVIDPF 297 (331)
T ss_dssp --EEECCCCTTSEEEEECHHHHHHTTTSSCCCCEEEECCCSCEEEEEEEECCCTTCBCCCC
T ss_pred --eEECCCCCCeEEEEccHHHHHHhCCEeeCCCceeCCCCCCEEEEEEEEcCCCCCEEeCC
Confidence 999999999999999999999999999999 5689999999999999999986
No 5
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=100.00 E-value=2e-60 Score=423.19 Aligned_cols=237 Identities=22% Similarity=0.299 Sum_probs=203.3
Q ss_pred CCceeecCCCCCCcchHHHHHHHHHHHhHhccEEEEeeCCCCHHHHHHHHHHHHHHhcCCHhhhcccccCCCCccceeee
Q 022556 37 EIPVISLAGIDDVGGKRAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKFDMSGGKKGGFIVS 116 (295)
Q Consensus 37 ~iPvIDls~l~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~~Gy~~~ 116 (295)
+||||||+.. +.+++|.+||++||||||+||||+.++++++++.+++||++ |+|+++.......+||...
T Consensus 3 ~IPvIDls~~--------~~~~~l~~A~~~~GFF~v~nHGi~~~li~~~~~~~~~FF~l--e~K~k~~~~~~~~~GY~~~ 72 (280)
T 3on7_A 3 KLETIDYRAA--------DSAKRFVESLRETGFGVLSNHPIDKELVERIYTEWQAFFNS--EAKNEFMFNRETHDGFFPA 72 (280)
T ss_dssp -CCEEETTST--------THHHHHHHHHHHHSEEEEESCSSCHHHHHHHHHHHHHHHTS--GGGGGGBCCTTTCCEEECC
T ss_pred CCCEEECCCh--------hHHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHhhh--HHHHHhccCCCCCCccccC
Confidence 6999999974 24689999999999999999999999999999999999998 7898887665567899653
Q ss_pred c---ccCCCcccchhhhhhhcccCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhcCCCh--HH---HHH
Q 022556 117 S---HLQGEVVKDWREIVTYFSFPKQSRDYSRWPDKPEGWMEVTKEYSDKLMGVACKLLEVLSEAMGLEK--EA---LTK 188 (295)
Q Consensus 117 ~---~~~~~~~~d~~e~~~~~~~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~--~~---~~~ 188 (295)
. ...+....||+|.|+++ .||..+++||+.+++|+++|.+++.+|+++|+++||++. ++ |.+
T Consensus 73 ~~~e~~~~~~~~D~kE~~~~~----------p~~~~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~ 142 (280)
T 3on7_A 73 SISETAKGHTVKDIKEYYHVY----------PWGRIPDSLRANILAYYEKANTLASELLEWIETYSPDEIKAKFSIPLPE 142 (280)
T ss_dssp C--------CCCCSCEEEEEC----------TTSCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHTTCSSCHHH
T ss_pred ccccccCCCCcccHHHHHhcC----------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcchhhhhHHHHH
Confidence 2 22233467999987652 377778999999999999999999999999999999763 22 556
Q ss_pred HhcCCC-ceeEeeccCCCCCCC--CcccccccccCCceEEEecCCCCceeEeeCCCCCeEeecCCCCcEEEEcchHHHHh
Q 022556 189 ACVDMD-QKIVVNYYPKCPQPD--LTLGLKRHTDPGTITLLLQDQVGGLQATKDNGKTWITVQPIEGAFVVNLGDHGHVS 265 (295)
Q Consensus 189 ~~~~~~-~~lrl~~Yp~~~~~~--~~~g~~~HtD~g~lTlL~q~~~~GLqV~~~~g~~W~~V~~~~g~~vVnvGd~L~~~ 265 (295)
.+.... +.+|++|||+++.++ ..+|+++|||+|+||||+|+.++||||++++| +|++|+|.||++|||+||+|++|
T Consensus 143 ~~~~~~~~~lr~~~YP~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqV~~~~g-~W~~V~p~pg~~vVNiGD~l~~~ 221 (280)
T 3on7_A 143 MIANSHKTLLRILHYPPMTGDEEMGAIRAAAHEDINLITVLPTANEPGLQVKAKDG-SWLDVPSDFGNIIINIGDMLQEA 221 (280)
T ss_dssp HHTTCSSCEEEEEEECCCCTTCCCCSEEEEEECCCSSEEEEECCSCCCEEEECTTS-CEEECCCCTTCEEEEECHHHHHH
T ss_pred HhcCCccceEEEEECCCCCCccccCcccccCCCCCCeEEEEEecCCCCeEEEcCCC-CEEECcCCCCEEEEEcChHHHHH
Confidence 665554 889999999998654 47899999999999999999999999998766 89999999999999999999999
Q ss_pred hCCCcccc------------ccceeeEEEEeeeCCCcceec
Q 022556 266 IYANTALI------------FLFLFILFYCFCLNHDVVLSR 294 (295)
Q Consensus 266 TnG~~~a~------------~~~R~S~~~F~~p~~d~~i~~ 294 (295)
|||++||+ ..+|||++||++|+.|++|+|
T Consensus 222 Tng~~kS~~HRVv~~~~~~~~~~R~Si~~F~~P~~d~~i~p 262 (280)
T 3on7_A 222 SDGYFPSTSHRVINPEGTDKTKSRISLPLFLHPHPSVVLSE 262 (280)
T ss_dssp TTTSSCCCCEEEECCTTCCTTSCEEECCEEECCCTTCBCSS
T ss_pred hCCcccCCCceEeCCCCCCCCCCeEEEEEEEcCCCCCEECC
Confidence 99999999 137999999999999999987
No 6
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=100.00 E-value=2.8e-60 Score=428.46 Aligned_cols=241 Identities=18% Similarity=0.224 Sum_probs=199.9
Q ss_pred CCCCCceeecCCCCCCcchHHHHHHHHHHHhHhccEEEEeeCCCCHHHHHHHHHHHHHHhcCC-HhhhcccccCC-CCcc
Q 022556 34 FSNEIPVISLAGIDDVGGKRAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALP-PEEKLKFDMSG-GKKG 111 (295)
Q Consensus 34 ~~~~iPvIDls~l~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp-~e~K~~~~~~~-~~~~ 111 (295)
|..+||||||+.+.++.. .++|.+||+++|||||+||||+.++++++++.+++||+|| .|+|+++.... ...+
T Consensus 1 m~~~iPvIDls~l~~~~~-----~~~l~~A~~~~GFf~l~nHGi~~~l~~~~~~~~~~fF~lP~~e~K~~~~~~~~~~~~ 75 (311)
T 1dcs_A 1 MDTTVPTFSLAELQQGLH-----QDEFRRCLRDKGLFYLTDCGLTDTELKSAKDLVIDFFEHGSEAEKRAVTSPVPTMRR 75 (311)
T ss_dssp CCCCCCEEEHHHHHTTCS-----HHHHHHHHHHTCEEEEESSSCCHHHHHHHHHHHHHHHHHCCHHHHHHTBCSSCCSSS
T ss_pred CCCCCcEEEchhhcCCCH-----HHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHcCCcHHHhHHhhccCCCCCC
Confidence 345799999998854211 1389999999999999999999999999999999999999 99999998654 3568
Q ss_pred ceeeeccc------CCCcccchhhhhhhcccCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhcCC----
Q 022556 112 GFIVSSHL------QGEVVKDWREIVTYFSFPKQSRDYSRWPDKPEGWMEVTKEYSDKLMGVACKLLEVLSEAMGL---- 181 (295)
Q Consensus 112 Gy~~~~~~------~~~~~~d~~e~~~~~~~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl---- 181 (295)
||...... ...+..||+|.|.+... +|.|| +|+||+.+++|+++|.+++..|+++|+++||+
T Consensus 76 Gy~~~~~e~~~~~~~~~~~~d~~E~~~~~~~------~n~wP--~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~ 147 (311)
T 1dcs_A 76 GFTGLESESTAQITNTGSYSDYSMCYSMGTA------DNLFP--SGDFERIWTQYFDRQYTASRAVAREVLRATGTEPDG 147 (311)
T ss_dssp EEEEC-----------------CEEEEECSS------SCCCS--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCTT
T ss_pred ceeeccccccccccCCCCCCCcceeeeccCC------CCCCC--ChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcC
Confidence 99754321 22457899999887542 68999 89999999999999999999999999999999
Q ss_pred ChHHHHHHhcCCCceeEeeccCCCCCCC--C--cccccccccCCceEEEecC-CCCc---eeEeeCCCCCeEeecCCCCc
Q 022556 182 EKEALTKACVDMDQKIVVNYYPKCPQPD--L--TLGLKRHTDPGTITLLLQD-QVGG---LQATKDNGKTWITVQPIEGA 253 (295)
Q Consensus 182 ~~~~~~~~~~~~~~~lrl~~Yp~~~~~~--~--~~g~~~HtD~g~lTlL~q~-~~~G---LqV~~~~g~~W~~V~~~~g~ 253 (295)
++++|.+. .+.+|++|||+++.++ + .+|+++|||+|+||||+|+ .++| |||+++ | +|++|+|+||+
T Consensus 148 ~~~~f~~~----~~~lrl~~YPp~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~v~G~~~LqV~~~-g-~W~~V~p~pg~ 221 (311)
T 1dcs_A 148 GVEAFLDC----EPLLRFRYFPQVPEHRSAEEQPLRMAPHYDLSMVTLIQQTPCANGFVSLQAEVG-G-AFTDLPYRPDA 221 (311)
T ss_dssp CHHHHHSC----CCEEEEEEECC-----------CCEEEEEECSSEEEEEEECCTTCCCCEEEEET-T-EEEECCCCTTC
T ss_pred cHhHHhhc----chhhheecCCCCCcccccCccccccccccCCCeEEEEecCCCCCCceeEEEEeC-C-EEEeCcCCCCe
Confidence 88888765 6789999999998653 3 6789999999999999998 8999 999994 4 89999999999
Q ss_pred EEEEcchHHHHhhCCCcccc-------c------cceeeEEEEeeeCCCccee
Q 022556 254 FVVNLGDHGHVSIYANTALI-------F------LFLFILFYCFCLNHDVVLS 293 (295)
Q Consensus 254 ~vVnvGd~L~~~TnG~~~a~-------~------~~R~S~~~F~~p~~d~~i~ 293 (295)
+||||||+||+||||++||+ . .+|||++||++|+.|++|+
T Consensus 222 lvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~~~~~~R~Si~~F~~p~~d~~i~ 274 (311)
T 1dcs_A 222 VLVFCGAIATLVTGGQVKAPRHHVAAPRRDQIAGSSRTSSVFFLRPNADFTFS 274 (311)
T ss_dssp EEEEECHHHHHHTTSCSCCCCEEECCC----CTTCCEEEEEEEECCCTTCEEE
T ss_pred EEEEHHHHHHHHhCCcccCCCceEeCCCcccCCCCCeEEEEEEEcCCCCcEEe
Confidence 99999999999999999998 2 3699999999999999987
No 7
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=87.87 E-value=7.8 Score=32.67 Aligned_cols=184 Identities=18% Similarity=0.215 Sum_probs=94.0
Q ss_pred HHHHHHHHHhHhccEEEEeeCCCCHHHHHHHHHHHHHHhcCCHhhhcccccCCCCccceeeecccCCCcccchhhhhhhc
Q 022556 55 EICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKFDMSGGKKGGFIVSSHLQGEVVKDWREIVTYF 134 (295)
Q Consensus 55 ~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~~Gy~~~~~~~~~~~~d~~e~~~~~ 134 (295)
...+.+..++...|++++.|- ++.+.++.+.+.++.+-. +. .+. .+..+... .....+.+
T Consensus 14 ~~~~~i~~~L~~~g~~Vid~f-Ls~ee~~~L~~~~~~~~~---~g--~~~------~a~i~~~~--~~~~~~iR------ 73 (247)
T 2hbt_A 14 LALEYIVPCMNKHGICVVDDF-LGKETGQQIGDEVRALHD---TG--KFT------DGQLVSQK--SDSSKDIR------ 73 (247)
T ss_dssp HHHHTHHHHHHHTSEEEESSS-SCHHHHHHHHHHHHHHHH---TT--CSC------SCCEEECC--SSSTTCEE------
T ss_pred hhHHHHHHHhccCCEEEECCC-CCHHHHHHHHHHHHhhhh---cC--Ccc------cccccccc--cccccccc------
Confidence 344678899999999987766 899999999988877431 00 011 11111000 00000000
Q ss_pred ccCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhcCCCceeEeeccCCCCCCCCcccc
Q 022556 135 SFPKQSRDYSRWPDKPEGWMEVTKEYSDKLMGVACKLLEVLSEAMGLEKEALTKACVDMDQKIVVNYYPKCPQPDLTLGL 214 (295)
Q Consensus 135 ~~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~~~~~~~~~~~~~lrl~~Yp~~~~~~~~~g~ 214 (295)
. +...|-.......+.+..|.+.+.++... +...+|+.. .. ...-+.+.+|++. ....
T Consensus 74 ~------d~i~wl~~~~~~~~~~~~l~~~i~~l~~~----ln~~lGl~~------i~-~~~e~~~~~Y~~~-----G~~y 131 (247)
T 2hbt_A 74 G------DKITWIEGKEPGCETIGLLMSSMDDLIRH----CNGKLGSYK------IN-GRTKAMVACYPGN-----GTGY 131 (247)
T ss_dssp C------CEEEEECSCSTTCHHHHHHHHHHHHHHHH----TTTTSTTCC------EE-EECCEEEEEECSS-----SCCE
T ss_pred c------cceeeecccccchhHHHHHHHHHHHHHHH----HhhhcCccc------cc-ccceEEEEEecCC-----CCcc
Confidence 0 00011111000011233455544444332 222233320 00 1123556778751 1235
Q ss_pred cccccC-----CceEEEec--C-C-----CCceeEeeCCCCCeEeecCCCCcEEEEcch--HHHHhhCCCccccccceee
Q 022556 215 KRHTDP-----GTITLLLQ--D-Q-----VGGLQATKDNGKTWITVQPIEGAFVVNLGD--HGHVSIYANTALIFLFLFI 279 (295)
Q Consensus 215 ~~HtD~-----g~lTlL~q--~-~-----~~GLqV~~~~g~~W~~V~~~~g~~vVnvGd--~L~~~TnG~~~a~~~~R~S 279 (295)
..|.|. -.+|+++. + + .|.|++...++.....|.|..|.+|+.-.+ .++ ....+...|+|
T Consensus 132 ~~H~D~~~~~~R~~T~vlYLN~~w~~~~~GG~l~~~~~~~~~~~~v~P~~grlv~F~s~~~~~H-----~V~p~~~~R~s 206 (247)
T 2hbt_A 132 VRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDRRNPH-----EVQPAYATRYA 206 (247)
T ss_dssp EEECSSCSCCSEEEEEEEECBTTCCHHHHBCCEEECCTTCSSCEEECCBTTEEEEEECSTTCCE-----EECCBSSCEEE
T ss_pred cccccCCCCCCceEEEEEEeCCCCCCCCCceeEEEecCCCCceEEEEcCCCEEEEEecCCCcee-----eeccCCCEEEE
Confidence 667776 26888875 2 1 233677765533568999999999998764 222 12224678999
Q ss_pred EEEEee
Q 022556 280 LFYCFC 285 (295)
Q Consensus 280 ~~~F~~ 285 (295)
+...++
T Consensus 207 it~W~~ 212 (247)
T 2hbt_A 207 ITVWYF 212 (247)
T ss_dssp EEEEEE
T ss_pred EEEEEc
Confidence 987665
No 8
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=85.33 E-value=3.2 Score=34.92 Aligned_cols=83 Identities=11% Similarity=0.013 Sum_probs=55.3
Q ss_pred eeEeeccCCCCCCCCcccccccccC--------CceEEEecCCCCceeEeeCCC---------CCeEeecCCCCcEEEEc
Q 022556 196 KIVVNYYPKCPQPDLTLGLKRHTDP--------GTITLLLQDQVGGLQATKDNG---------KTWITVQPIEGAFVVNL 258 (295)
Q Consensus 196 ~lrl~~Yp~~~~~~~~~g~~~HtD~--------g~lTlL~q~~~~GLqV~~~~g---------~~W~~V~~~~g~~vVnv 258 (295)
...+|+|.+.. -++++|.|- .+.+|-+- ...=+.+..... +..+.+...+|+++|+-
T Consensus 127 ~~LvN~Y~~G~-----d~i~~H~D~~~~~~~~~~IaslSLG-~~~~f~f~~~~~~~~~~~~~~~~~~~i~L~~gsllvM~ 200 (238)
T 2iuw_A 127 SLLCNLYRNEK-----DSVDWHSDDEPSLGRCPIIASLSFG-ATRTFEMRKKPPPEENGDYTYVERVKIPLDHGTLLIME 200 (238)
T ss_dssp EEEEEEECSTT-----CCEEEECCCCGGGCSSCCEEEEEEE-SCEEEEEEECCC--------CCCEEEEEECTTCEEEEE
T ss_pred EEEEEEECCCC-----CceeCCcCChhhcCCCCcEEEEECC-CCEEEEEeccCCccccCcccCCceEEEEcCCCCEEEEC
Confidence 44678997643 267888874 22333331 112244433221 26889999999999999
Q ss_pred chHHHHhhCCCcccc--ccceeeEEEEe
Q 022556 259 GDHGHVSIYANTALI--FLFLFILFYCF 284 (295)
Q Consensus 259 Gd~L~~~TnG~~~a~--~~~R~S~~~F~ 284 (295)
|++=..|.-|.-+.. ...|+|+.|=.
T Consensus 201 G~~r~~w~H~I~~~~~~~~~RIsLTfR~ 228 (238)
T 2iuw_A 201 GATQADWQHRVPKEYHSREPRVNLTFRT 228 (238)
T ss_dssp ETHHHHEEEEECCCSSCCCCEEEEEEEC
T ss_pred hhhhCccEecCCCcCCCCCCEEEEEeee
Confidence 999888988877653 67899998843
No 9
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=84.94 E-value=3.9 Score=34.51 Aligned_cols=81 Identities=15% Similarity=0.055 Sum_probs=49.4
Q ss_pred ceeEeeccCCCCCCCCcccccccccCC-----------ceEEEec--C----CCCceeEeeCCCCCeEeecCCCCcEEEE
Q 022556 195 QKIVVNYYPKCPQPDLTLGLKRHTDPG-----------TITLLLQ--D----QVGGLQATKDNGKTWITVQPIEGAFVVN 257 (295)
Q Consensus 195 ~~lrl~~Yp~~~~~~~~~g~~~HtD~g-----------~lTlL~q--~----~~~GLqV~~~~g~~W~~V~~~~g~~vVn 257 (295)
..+++++|.+.. -..+|.|.. .+|+++. + ..|.+.+.... .=..|+|..|.+|+.
T Consensus 99 e~~~~~rY~~G~------~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GGetvf~~~~--~~~~V~P~~G~~v~F 170 (243)
T 3dkq_A 99 YPPLFNRYQGGE------TFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGELVIQDTY--GQQSIKLSAGSLVLY 170 (243)
T ss_dssp EEEEEEEECTTC------EEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECCEEEEETT--EEEEECCCTTCEEEE
T ss_pred ccceEEEECCCC------eeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCceEEEeeCC--CcEEEecCCCEEEEE
Confidence 346778886642 246666652 5677765 3 12446666654 236799999999997
Q ss_pred cchHHHHhhCCCccccccceeeEEEEeeeC
Q 022556 258 LGDHGHVSIYANTALIFLFLFILFYCFCLN 287 (295)
Q Consensus 258 vGd~L~~~TnG~~~a~~~~R~S~~~F~~p~ 287 (295)
-.+++ .+..+-+.-.|+++..+++..
T Consensus 171 ~s~~l----H~v~pV~~G~R~~~~~Wi~s~ 196 (243)
T 3dkq_A 171 PSSSL----HQVTPVLSGERTAAFMWLQSM 196 (243)
T ss_dssp ETTSE----EEECCEEEECEEEEEEEEEES
T ss_pred CCCCe----EcCccccccCEEEEEEehhhc
Confidence 64311 111122256899999988754
No 10
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=79.54 E-value=19 Score=29.51 Aligned_cols=42 Identities=10% Similarity=-0.027 Sum_probs=30.4
Q ss_pred CeEeecCCCCcEEEEcchHHHHhhCCCcccc-ccceeeEEEEeeeCC
Q 022556 243 TWITVQPIEGAFVVNLGDHGHVSIYANTALI-FLFLFILFYCFCLNH 288 (295)
Q Consensus 243 ~W~~V~~~~g~~vVnvGd~L~~~TnG~~~a~-~~~R~S~~~F~~p~~ 288 (295)
.+..|.|.+|.+||.-+.+. -+..+.. ..+|+|++|-+.+..
T Consensus 167 ~~~~i~P~~G~lvlFpS~l~----H~V~p~~~~~~RiSIsFN~~~~~ 209 (216)
T 2rg4_A 167 TFRSVAPKVGDVLLWESWLR----HEVPMNMAEEDRISVSFNYAWGE 209 (216)
T ss_dssp SEEEECCCTTEEEEEETTSC----EEECCCCSSSCEEEEEEEEEC--
T ss_pred CeeEecCCCCeEEEECCCCE----EeccCCCCCCCEEEEEEEeecCC
Confidence 56789999999999987533 3333433 568999999988764
No 11
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=77.02 E-value=6.5 Score=32.12 Aligned_cols=80 Identities=8% Similarity=0.034 Sum_probs=52.6
Q ss_pred eEeeccCCCCCCCCcccccccccCC--------ceEEEecCCCCceeEeeCC--------CCCeEeecCCCCcEEEEcch
Q 022556 197 IVVNYYPKCPQPDLTLGLKRHTDPG--------TITLLLQDQVGGLQATKDN--------GKTWITVQPIEGAFVVNLGD 260 (295)
Q Consensus 197 lrl~~Yp~~~~~~~~~g~~~HtD~g--------~lTlL~q~~~~GLqV~~~~--------g~~W~~V~~~~g~~vVnvGd 260 (295)
..+|+|.+.. -+++.|.|-- +.+|-+- ...-+.+.... +...+.+...+|+++|+-|+
T Consensus 102 ~LvN~Y~~G~-----d~i~~H~D~~~~~~~~~~IasvSLG-~~~~f~~~~~~~~~~~~~~~~~~~~~~L~~GsllvM~g~ 175 (204)
T 3s57_A 102 VLINRYKDGS-----DHICEHRDDERELAPGSPIASVSFG-ASRDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMMNHP 175 (204)
T ss_dssp EEEEEESSTT-----CCEEEECCCCTTBCTTCCEEEEEEE-SCEEEEEEEGGGCSSSCSCCCCCEEEEECTTEEEEEETT
T ss_pred eEEEEECCCC-----CcccceecChhhccCCCcEEEEECC-CceEEEEEEcCCCccccccCCceEEEECCCCCEEEECch
Confidence 4578887644 2678888752 2233221 11224444321 11468899999999999999
Q ss_pred HHHHhhCCCcccc--ccceeeEEE
Q 022556 261 HGHVSIYANTALI--FLFLFILFY 282 (295)
Q Consensus 261 ~L~~~TnG~~~a~--~~~R~S~~~ 282 (295)
+=..|..|.-+.. ...|+|+.|
T Consensus 176 ~q~~w~H~Ip~~~~~~~~RislTF 199 (204)
T 3s57_A 176 TNTHWYHSLPVRKKVLAPRVNLTF 199 (204)
T ss_dssp HHHHEEEEECCCTTCCSCEEEEEE
T ss_pred hhheeEeeccccCCCCCCEEEEEe
Confidence 9888988866544 578999987
No 12
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=63.34 E-value=2.5 Score=39.00 Aligned_cols=55 Identities=15% Similarity=0.130 Sum_probs=39.3
Q ss_pred CCCCCceeecCCCCCCcchHHHHHHHHHHHhHhccEEEEeeCCCCHHHHHHHHHHHHHHhc
Q 022556 34 FSNEIPVISLAGIDDVGGKRAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFA 94 (295)
Q Consensus 34 ~~~~iPvIDls~l~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~ 94 (295)
.++-||.||++.+.++. ..+...+.+++.|++.|+|. |+.+...+..+.+.+|.+
T Consensus 97 G~~~iP~i~f~di~~~~-----~s~~~~~~ir~rG~vVIRgv-vp~e~A~~~~~~~~~yl~ 151 (461)
T 2dbn_A 97 GDAVWPVLSYADIKAGH-----VTAEQREQIKRRGCAVIKGH-FPREQALGWDQSMLDYLD 151 (461)
T ss_dssp TCCSSCEEEHHHHHHTC-----CCHHHHHHHHHHSEEEEETS-SCHHHHHHHHHHHHHHHH
T ss_pred CCCCcceecHHHhcCCC-----CCHHHHHHHHhccEEEECCC-CCHHHHHHHHHHHHHHHH
Confidence 46679999999875321 12345567789999999887 898877776666666653
No 13
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=55.57 E-value=17 Score=29.79 Aligned_cols=80 Identities=16% Similarity=0.090 Sum_probs=49.3
Q ss_pred eeEeeccCCCCCCCCcccccccccC-----C--ceEEEecCCCCceeEeeC-CCCCeEeecCCCCcEEEEcchHHHHhhC
Q 022556 196 KIVVNYYPKCPQPDLTLGLKRHTDP-----G--TITLLLQDQVGGLQATKD-NGKTWITVQPIEGAFVVNLGDHGHVSIY 267 (295)
Q Consensus 196 ~lrl~~Yp~~~~~~~~~g~~~HtD~-----g--~lTlL~q~~~~GLqV~~~-~g~~W~~V~~~~g~~vVnvGd~L~~~Tn 267 (295)
...+|+|.+. . ++++|.|- + +++|-+- ...-+.+... .++....+...+|+++|.-|++- .|..
T Consensus 106 ~~LvN~Y~~G-----~-~i~~H~D~~e~~~~~pI~svSLG-~~~~f~f~~~~~~~~~~~i~L~~GsllvM~G~~r-~~~H 177 (211)
T 3i3q_A 106 ACLINRYAPG-----A-KLSLHQDKDEPDLRAPIVSVSLG-LPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESR-LFYH 177 (211)
T ss_dssp EEEEEEECTT-----C-CEEEECCCCCSCTTSCEEEEEEE-SCEEEEECCSSTTSCCEEEEECTTCEEEECGGGT-TCCE
T ss_pred EEEEEEEcCC-----C-CcccccCCCccccCCCEEEEECC-CCeEEEEecccCCCceEEEECCCCCEEEECchHH-ceEe
Confidence 3557888663 2 68899882 2 2233331 1123444432 22368899999999999999985 4654
Q ss_pred CCcccc-------ccceeeEEEE
Q 022556 268 ANTALI-------FLFLFILFYC 283 (295)
Q Consensus 268 G~~~a~-------~~~R~S~~~F 283 (295)
|.-+.. ...|+|+.|=
T Consensus 178 ~I~~~~~~~~p~~~~~RIsLTFR 200 (211)
T 3i3q_A 178 GIQPLKAGFHPLTIDCRYNLTFR 200 (211)
T ss_dssp EECCCCCCCBTTTBTCEEEEEEE
T ss_pred ccCcccCCcCCCCCCCEEEEEee
Confidence 444433 2469999874
No 14
>1m5a_B Insulin B chain; alpha helices, beta sheets, 3(10) helices, disulphide bridge hormone-growth factor complex; 1.20A {Sus scrofa} SCOP: g.1.1.1 PDB: 1aph_B 1b18_B 1b19_B 1b2a_B 1b2b_B 1b2c_B 1b2d_B 1b2e_B 1b2f_B 1b2g_B 1bph_B 1cph_B 1dph_B 1b17_B 1mpj_B 1wav_B 1zni_B 2a3g_B 2bn1_B 2bn3_B ...
Probab=49.78 E-value=16 Score=19.99 Aligned_cols=18 Identities=17% Similarity=0.514 Sum_probs=15.8
Q ss_pred HHHHHHHHHhHhccEEEE
Q 022556 55 EICKKIVEACEDWGIFQV 72 (295)
Q Consensus 55 ~~~~~l~~A~~~~Gff~l 72 (295)
++++.|.-.|.+-||||-
T Consensus 10 ~LVdaL~~vCgdRGF~~~ 27 (30)
T 1m5a_B 10 HLVEALYLVCGERGFFYT 27 (30)
T ss_dssp HHHHHHHHHHGGGCEEEC
T ss_pred HHHHHHHHHhccCccccC
Confidence 678889999999999983
No 15
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=46.59 E-value=13 Score=33.55 Aligned_cols=52 Identities=13% Similarity=0.248 Sum_probs=38.9
Q ss_pred CCceeecCCCCCCcchHHHHHHHHHHHhHhccEEEEeeCCCCHHHHHHHHHHHHHHhcC
Q 022556 37 EIPVISLAGIDDVGGKRAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFAL 95 (295)
Q Consensus 37 ~iPvIDls~l~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~l 95 (295)
++|.||++.+..+ .+.+.++.+++.++|++.+.+-.++.+ ...+.++.|-.+
T Consensus 122 ~~~~~~~~~~l~~----d~~~~~~~~~l~~~Gvv~frg~~~~~~---~~~~~a~~~G~l 173 (388)
T 3o2g_A 122 QLPTLDFEDVLRY----DEHAYKWLSTLKKVGIVRLTGASDKPG---EVSKLGKRMGFL 173 (388)
T ss_dssp CCCEEEHHHHHHC----HHHHHHHHHHHHHHSEEEEECCCSSTT---HHHHHHHHHSCC
T ss_pred CCCccCHHHHhcC----HHHHHHHHHHHHhcCEEEEeCCCCCHH---HHHHHHHHhCCC
Confidence 5899999876421 356788999999999999999988754 344566666544
No 16
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=44.97 E-value=69 Score=26.15 Aligned_cols=99 Identities=18% Similarity=0.107 Sum_probs=50.7
Q ss_pred HHHHHHHHhcCCChHHHHHHhcCCCceeEeeccCCCCCCCCcccccccccCC-----------ceEEEec--CC-CCc-e
Q 022556 170 KLLEVLSEAMGLEKEALTKACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPG-----------TITLLLQ--DQ-VGG-L 234 (295)
Q Consensus 170 ~ll~~l~~~Lgl~~~~~~~~~~~~~~~lrl~~Yp~~~~~~~~~g~~~HtD~g-----------~lTlL~q--~~-~~G-L 234 (295)
.|.+.|+..+|++.. ..-.+++.+|.+... ..+|.|+. .+|+++. |. .|| +
T Consensus 94 ~i~~Ri~~~~gl~~~--------~~E~lqv~~Y~~G~~------y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT 159 (216)
T 3itq_A 94 KIEKRISSIMNVPAS--------HGEGLHILNYEVDQQ------YKAHYDYFAEHSRSAANNRISTLVMYLNDVEEGGET 159 (216)
T ss_dssp HHHHHHHHHHTSCGG--------GBCCCEEEEECBTCC------EEEECSSCCTTSGGGGGCEEEEEEEECSCCSEECCE
T ss_pred HHHHHHHHhcCceec--------cccceeEEEeCCCCc------cccccCCCcCCCcccCCceEEEEEEecccCCcCcee
Confidence 334444445677532 112366777755331 35566653 4788876 22 233 3
Q ss_pred eEeeCCCCCeEeecCCCCcEEEEcc-----hHHHHhhCCCccccccceeeEEEEeee
Q 022556 235 QATKDNGKTWITVQPIEGAFVVNLG-----DHGHVSIYANTALIFLFLFILFYCFCL 286 (295)
Q Consensus 235 qV~~~~g~~W~~V~~~~g~~vVnvG-----d~L~~~TnG~~~a~~~~R~S~~~F~~p 286 (295)
.+ +. .=+.|.|..|.+|+.-. +.=.....+-.+-+.-.|+++.-+++-
T Consensus 160 ~F--p~--~~~~V~P~~G~al~f~~~~~~g~~d~~~lH~~~PV~~G~K~v~~~W~~~ 212 (216)
T 3itq_A 160 FF--PK--LNLSVHPRKGMAVYFEYFYQDQSLNELTLHGGAPVTKGEKWIATQWVRR 212 (216)
T ss_dssp EE--TT--TTEEECCCTTCEEEEECCCSSHHHHHTTCEEECCEEESCEEEEEEEEES
T ss_pred Ee--cC--CCCEEecCCCeEEEEeccCCCCCCCCccccccceeccccEEEEEeeEec
Confidence 33 32 22789999999888653 100111111111124468888877764
No 17
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=43.76 E-value=19 Score=30.46 Aligned_cols=50 Identities=14% Similarity=0.131 Sum_probs=35.6
Q ss_pred CCCceeecCCCCCCcchHHHHHHHHHHHhHhccEEEEeeCCCCHHHHHHHHHHHHHHh
Q 022556 36 NEIPVISLAGIDDVGGKRAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFF 93 (295)
Q Consensus 36 ~~iPvIDls~l~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF 93 (295)
.+|+-||+++..+ .+..++|.+++.++|++.+.+-.++.+ ...+.++.|-
T Consensus 16 aei~gvdl~~~l~-----~~~~~~l~~~l~~~Gvv~frg~~~~~~---~~~~~~~~~G 65 (283)
T 1otj_A 16 AQISGADLTRPLS-----DNQFEQLYHAVLRHQVVFLRDQAITPQ---QQRALAQRFG 65 (283)
T ss_dssp EEEESCCSSSCCC-----HHHHHHHHHHHHHHSEEEECSCCCCHH---HHHHHHHTTS
T ss_pred EEEECCCcCccCC-----HHHHHHHHHHHHHCCEEEECCCCCCHH---HHHHHHHHhC
Confidence 3577788887432 145788999999999999999888754 3344555553
No 18
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=38.53 E-value=31 Score=30.54 Aligned_cols=68 Identities=18% Similarity=0.219 Sum_probs=45.9
Q ss_pred eeEeeccCCCCCCCCcccccccccCC------ceEEEecCCCCceeEeeCCCCCeEeecCCCCcEEEEcchHHHHhhCCC
Q 022556 196 KIVVNYYPKCPQPDLTLGLKRHTDPG------TITLLLQDQVGGLQATKDNGKTWITVQPIEGAFVVNLGDHGHVSIYAN 269 (295)
Q Consensus 196 ~lrl~~Yp~~~~~~~~~g~~~HtD~g------~lTlL~q~~~~GLqV~~~~g~~W~~V~~~~g~~vVnvGd~L~~~TnG~ 269 (295)
...+|+|.+.. ++++|.|-. +.||-+ ....-+.+...++ .++.+...+|+++|+-|++=..|..|.
T Consensus 199 ~~lvN~Y~~G~------~I~~H~D~~~~~~~~I~slSL-G~~~~f~f~~~~~-~~~~l~L~~gsLlvM~G~~r~~w~H~I 270 (345)
T 3tht_A 199 QMTINQYEPGQ------GIPAHIDTHSAFEDEIVSLSL-GSEIVMDFKHPDG-IAVPVMLPRRSLLVMTGESRYLWTHGI 270 (345)
T ss_dssp EEEEEEECTTC------CEEEECCCTTTBCSCEEEEEE-SSCEEEEEECTTS-CEEEEEECTTEEEEECTHHHHTSEEEE
T ss_pred EEEEEEecCCC------CEeeccCCchhcCCeEEEEEC-CCceeEEEccCCC-ceEEEEcCCCcEEEEChHHhhceEccC
Confidence 45578886622 688888873 333333 1222355555544 689999999999999999988886655
Q ss_pred cc
Q 022556 270 TA 271 (295)
Q Consensus 270 ~~ 271 (295)
-+
T Consensus 271 ~~ 272 (345)
T 3tht_A 271 TC 272 (345)
T ss_dssp CC
T ss_pred Cc
Confidence 44
No 19
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=36.87 E-value=30 Score=29.65 Aligned_cols=51 Identities=18% Similarity=0.079 Sum_probs=36.2
Q ss_pred CCCceeecCCCCCCcchHHHHHHHHHHHhHhccEEEEeeCC-CCHHHHHHHHHHHHHHhc
Q 022556 36 NEIPVISLAGIDDVGGKRAEICKKIVEACEDWGIFQVVDHG-VDAKLISDMTRLATEFFA 94 (295)
Q Consensus 36 ~~iPvIDls~l~~~~~~~~~~~~~l~~A~~~~Gff~l~nhg-i~~~~~~~~~~~~~~fF~ 94 (295)
.+|+-||++...+ .+..++|.+++.++|++.+.+-. ++. +...+.++.|-.
T Consensus 26 aei~gvdl~~~l~-----~~~~~~l~~~l~~~Gvv~fRg~~~l~~---~~~~~~~~~fG~ 77 (301)
T 1oih_A 26 AEIRGVKLSPDLD-----AATVEAIQAALVRHKVIFFRGQTHLDD---QSQEGFAKLLGE 77 (301)
T ss_dssp EEEESCCCCTTCC-----HHHHHHHHHHHHHHSEEEECCCTTCCH---HHHHHHHHTTSC
T ss_pred eEEeCCCccccCC-----HHHHHHHHHHHHHCCEEEECCCCCCCH---HHHHHHHHHhCC
Confidence 4577788887432 24568899999999999999887 885 344455565543
No 20
>2opi_A L-fuculose-1-phosphate aldolase; L-fuculose-1-phosphate aldolas structural genomics, PSI-2, protein structure initiative; 2.50A {Bacteroides thetaiotaomicron}
Probab=36.78 E-value=20 Score=29.19 Aligned_cols=36 Identities=33% Similarity=0.450 Sum_probs=28.6
Q ss_pred CCceeecCCCCCCcchHHHHHHHHHHHhHhccEEEEeeCCC
Q 022556 37 EIPVISLAGIDDVGGKRAEICKKIVEACEDWGIFQVVDHGV 77 (295)
Q Consensus 37 ~iPvIDls~l~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi 77 (295)
.||++++....+ .+.++.+.+++.+.-.+.|.|||+
T Consensus 125 ~v~~~~y~~~g~-----~~la~~i~~~l~~~~avll~nHG~ 160 (212)
T 2opi_A 125 EIPVIPYYRPGS-----PELAKAVVEAMLKHNSVLLTNHGQ 160 (212)
T ss_dssp CCCEECCCCTTC-----HHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CeEEEcCCCCCc-----HHHHHHHHHHhccCCEEEEcCCCc
Confidence 699999875532 356778889998888999999996
No 21
>3r1j_A Alpha-ketoglutarate-dependent taurine dioxygenase; ssgcid, oxidoreductase, structural genomics; 2.05A {Mycobacterium avium} SCOP: b.82.2.0 PDB: 3swt_A
Probab=33.81 E-value=37 Score=29.25 Aligned_cols=52 Identities=13% Similarity=0.072 Sum_probs=37.0
Q ss_pred CCCceeecCCCCCCcchHHHHHHHHHHHhHhccEEEEeeC-CCCHHHHHHHHHHHHHHhcC
Q 022556 36 NEIPVISLAGIDDVGGKRAEICKKIVEACEDWGIFQVVDH-GVDAKLISDMTRLATEFFAL 95 (295)
Q Consensus 36 ~~iPvIDls~l~~~~~~~~~~~~~l~~A~~~~Gff~l~nh-gi~~~~~~~~~~~~~~fF~l 95 (295)
.+|+-|||++..+ .+..++|.+++.++|.+.+.+- .++.+ +..+.++.|=.+
T Consensus 20 aei~gvdl~~~L~-----d~~~~~l~~al~~~gvv~fR~q~~l~~~---~~~~fa~~fG~l 72 (301)
T 3r1j_A 20 ARVDGVRLGGDLD-----DATVEQIRRALLTHKVIFFRHQHHLDDS---RQLEFARLLGTP 72 (301)
T ss_dssp EEEESCCCSTTCC-----HHHHHHHHHHHHHHSEEEECCCTTCCHH---HHHHHHHHHSCB
T ss_pred ceEeCCCccccCC-----HHHHHHHHHHHHHCCEEEECCCCCCCHH---HHHHHHHhcCCc
Confidence 4577788884322 2457889999999999999998 78764 444566666443
No 22
>2fk5_A Fuculose-1-phosphate aldolase; class II aldolase, metal binding, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2flf_A
Probab=32.72 E-value=39 Score=27.20 Aligned_cols=51 Identities=20% Similarity=0.245 Sum_probs=35.3
Q ss_pred CCcee-ecCCCCCCcchHHHHHHHHHHHhHhccEEEEeeCCCC--H------HHHHHHHHHHHHH
Q 022556 37 EIPVI-SLAGIDDVGGKRAEICKKIVEACEDWGIFQVVDHGVD--A------KLISDMTRLATEF 92 (295)
Q Consensus 37 ~iPvI-Dls~l~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~--~------~~~~~~~~~~~~f 92 (295)
.||++ ++....+ .+.++.+.+++.+.-.+.|.|||+= - +.+++++..+..+
T Consensus 117 ~ip~~~~y~~~g~-----~ela~~i~~~l~~~~avll~nHG~~~~G~~~~~~~~~~eA~~~~~~l 176 (200)
T 2fk5_A 117 EVPVLAPKTVSAT-----EEAALSVAEALREHRACLLRGHGAFAVGLKEAPEEALLEAYGLMTTL 176 (200)
T ss_dssp CEEEECCSCCSSS-----HHHHHHHHHHHHHCSEEEETTTEEEEEECCSSHHHHHHHHHHHHHHH
T ss_pred CceEecCCCCCCc-----HHHHHHHHHHhCcCCEEEECCCCcEEEeCCCCCcCcHHHHHHHHHHH
Confidence 69999 7765432 3566778888888889999999952 2 4566666555443
No 23
>3pvj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, Fe(II) binding, oxidoreductas; 1.85A {Pseudomonas putida KT2440} SCOP: b.82.2.5 PDB: 3v15_A 3v17_A*
Probab=32.62 E-value=30 Score=29.39 Aligned_cols=51 Identities=18% Similarity=0.195 Sum_probs=36.6
Q ss_pred CCCceeecCCCCCCcchHHHHHHHHHHHhHhccEEEEeeCCCCHHHHHHHHHHHHHHhc
Q 022556 36 NEIPVISLAGIDDVGGKRAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFA 94 (295)
Q Consensus 36 ~~iPvIDls~l~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~ 94 (295)
.+|.-|||+...+ .+..++|.+++.++|.+.+.+-.++.+ +..+.++.|=.
T Consensus 14 aei~gvdl~~~l~-----~~~~~~l~~~l~~~gvv~fR~q~l~~~---~~~~fa~~fG~ 64 (277)
T 3pvj_A 14 AQISGVDISRDIS-----AEERDAIEQALLQHQVLFLRDQPINPE---QQARFAARFGD 64 (277)
T ss_dssp EEEESCCTTSCCC-----HHHHHHHHHHHHHHSEEEESSCCCCHH---HHHHHHGGGSC
T ss_pred EEEeCCCccccCC-----HHHHHHHHHHHHHCCEEEECCCCCCHH---HHHHHHHHhCC
Confidence 4577789987332 245688999999999999999988754 33455666543
No 24
>1e4c_P L-fuculose 1-phosphate aldolase; aldolase (class II), bacterial L-fucose metabolism; 1.66A {Escherichia coli} SCOP: c.74.1.1 PDB: 1fua_A 2fua_A 3fua_A 4fua_A* 1dzv_P 1e4b_P 1e47_P* 1e48_P* 1dzz_P 1e46_P 1dzu_P 1dzy_P 1dzx_P 1dzw_P 1e49_P 1e4a_P
Probab=32.50 E-value=22 Score=29.02 Aligned_cols=36 Identities=19% Similarity=0.316 Sum_probs=28.3
Q ss_pred CCceeecCCCCCCcchHHHHHHHHHHHhHhccEEEEeeCCC
Q 022556 37 EIPVISLAGIDDVGGKRAEICKKIVEACEDWGIFQVVDHGV 77 (295)
Q Consensus 37 ~iPvIDls~l~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi 77 (295)
.||++++..... .+.++.+.+++.+.-.+.|.|||+
T Consensus 122 ~ip~~~y~~~g~-----~~la~~i~~~l~~~~avll~nHG~ 157 (215)
T 1e4c_P 122 SIPCAPYATFGT-----RELSEHVALALKNRKATLLQHHGL 157 (215)
T ss_dssp CBCEECCCCTTC-----HHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CcceeeCCCCCc-----HHHHHHHHHHhccCCEEEEcCCCc
Confidence 699999875532 256678888998888899999996
No 25
>1pvt_A Sugar-phosphate aldolase; structural genomics, PSI, protein initiative, midwest center for structural genomics, MCSG; 2.50A {Thermotoga maritima} SCOP: c.74.1.1
Probab=31.27 E-value=35 Score=28.26 Aligned_cols=51 Identities=22% Similarity=0.191 Sum_probs=34.4
Q ss_pred CCCCceeecCCCCCCcchHHHHHHHHHHHhHhccEEEEeeCCCC--HHHHHHHHHHHH
Q 022556 35 SNEIPVISLAGIDDVGGKRAEICKKIVEACEDWGIFQVVDHGVD--AKLISDMTRLAT 90 (295)
Q Consensus 35 ~~~iPvIDls~l~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~--~~~~~~~~~~~~ 90 (295)
...||++++.... ..++++++.+++++.-.+.+.|||+= -+.+++++..+.
T Consensus 159 ~~~v~~~~y~~~g-----~~ela~~i~~~l~~~~avll~nHG~~~~G~~~~eA~~~~~ 211 (238)
T 1pvt_A 159 PQGISVVEFEKPG-----SVELGLKTVEKSEGKDAVLWDKHGVVAFGKDVAEAYDRVE 211 (238)
T ss_dssp SSCCEEECCCSTT-----CHHHHHHHHHHTSSCSEEEETTSCEEEEESSHHHHHHHHH
T ss_pred CCCceEecCCCCC-----cHHHHHHHHHHhccCCEEEEcCCCceEecCCHHHHHHHHH
Confidence 3579999986543 13567788888888889999999963 123444444333
No 26
>2da7_A Zinc finger homeobox protein 1B; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=28.96 E-value=25 Score=23.53 Aligned_cols=40 Identities=28% Similarity=0.236 Sum_probs=32.2
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHh
Q 022556 151 EGWMEVTKEYSDKLMGVACKLLEVLSEAMGLEKEALTKAC 190 (295)
Q Consensus 151 ~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~~~~~~~ 190 (295)
...+..++.||..-.+-...-+..||+.+||+.+.+...+
T Consensus 14 k~ql~~Lk~yF~~n~~Ps~eei~~LA~~lgL~~~VVrVWF 53 (71)
T 2da7_A 14 KDHMSVLKAYYAMNMEPNSDELLKISIAVGLPQEFVKEWF 53 (71)
T ss_dssp THHHHHHHHHHHHCSSCCHHHHHHHHHHHTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCHHHHHHHH
Confidence 3557788889888888888889999999999987655554
No 27
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=27.25 E-value=1.8e+02 Score=23.31 Aligned_cols=40 Identities=10% Similarity=0.007 Sum_probs=25.3
Q ss_pred eEeecCCCCcEEEEcchHHHHhhCCCcc-----c----cccceeeEEEEeeeC
Q 022556 244 WITVQPIEGAFVVNLGDHGHVSIYANTA-----L----IFLFLFILFYCFCLN 287 (295)
Q Consensus 244 W~~V~~~~g~~vVnvGd~L~~~TnG~~~-----a----~~~~R~S~~~F~~p~ 287 (295)
-+.|.|..|.+|+.-- ...+|..- + +.-.||++..+++-+
T Consensus 170 ~~~V~P~~G~al~f~~----~~~~g~~d~~~lH~~~PV~~G~K~~~~~Wi~~~ 218 (224)
T 2jig_A 170 GLAVKPIKGDALMFYS----LKPDGSNDPASLHGSCPTLKGDKWSATKWIHVA 218 (224)
T ss_dssp SEEECCCTTCEEEEES----BCTTSCBCGGGCEEECCEEESEEEEEEEEEESS
T ss_pred ceEEecccCcEEEEEe----eCCCCCCCCCCcccCCccccceEEEEEEeEEcC
Confidence 3789999999888743 11233221 1 144689988887754
No 28
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=26.23 E-value=1.1e+02 Score=26.68 Aligned_cols=41 Identities=20% Similarity=0.162 Sum_probs=31.0
Q ss_pred HHHHHHHHHHhHhccEEEEeeCCCC----HHHHHHHHHHHHHHhc
Q 022556 54 AEICKKIVEACEDWGIFQVVDHGVD----AKLISDMTRLATEFFA 94 (295)
Q Consensus 54 ~~~~~~l~~A~~~~Gff~l~nhgi~----~~~~~~~~~~~~~fF~ 94 (295)
+++.+++.+.++.-||..=-+|||+ .+-+..+.+++++|++
T Consensus 304 e~i~~~v~~~l~~~g~I~~~Ghgi~p~tp~env~a~v~av~ey~A 348 (348)
T 4ay7_A 304 DKIKAEAKEALEGGIDVLAPGCGIAPMTPLENVKALVAARDEFYA 348 (348)
T ss_dssp HHHHHHHHHHHHTTCSEEEESSSCCTTCCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhCCCCEEeCCCccCCCCCHHHHHHHHHHHHHhcC
Confidence 3455566667778888766789875 5788999999999974
No 29
>2v9l_A Rhamnulose-1-phosphate aldolase; entropy index, metal-binding, oligomerization, zinc, lyase, class II, cytoplasm; HET: PGO; 1.23A {Escherichia coli} PDB: 2uyv_A* 1ojr_A 2v9g_A* 1gt7_A* 2v9n_A* 2uyu_A* 2v9m_A* 2v9o_A 2v9e_A 2v9f_A 2v9i_A 2v29_A 2v2a_A* 2v2b_A
Probab=24.54 E-value=37 Score=28.83 Aligned_cols=50 Identities=10% Similarity=0.101 Sum_probs=33.9
Q ss_pred CCCceeecCCCCCCcchHHHHHHHHHHHhHhccEEEEeeCCCC--HHHHHHHHHHHH
Q 022556 36 NEIPVISLAGIDDVGGKRAEICKKIVEACEDWGIFQVVDHGVD--AKLISDMTRLAT 90 (295)
Q Consensus 36 ~~iPvIDls~l~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~--~~~~~~~~~~~~ 90 (295)
..||++++....+ .+.++++.+++.+.-.+.+.|||+= -+.+++++..+.
T Consensus 178 ~~v~v~~y~~~g~-----~ela~~i~~~l~~~~avll~nHG~~~~G~~~~eA~~~~e 229 (274)
T 2v9l_A 178 DGVGILPWMVPGT-----DAIGQATAQEMQKHSLVLWPFHGVFGSGPTLDETFGLID 229 (274)
T ss_dssp TCEEECCCCCSSS-----HHHHHHHHHHHTTCSEEEETTTEEEEEESSHHHHHHHHH
T ss_pred CceeEecCCCCCC-----HHHHHHHHHHHccCCEEEEcCCCceEecCCHHHHHHHHH
Confidence 3699998865432 2567788889988889999999963 123444444333
No 30
>2rdq_A 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II ketoglutarate dependent hydroxylase...; double stranded barrel helix, dioxygenase; HET: AKG; 1.31A {Streptomyces avermitilis} PDB: 2rdn_A* 2rdr_A* 2rds_A*
Probab=23.68 E-value=86 Score=26.20 Aligned_cols=36 Identities=14% Similarity=0.201 Sum_probs=29.9
Q ss_pred HHHHHHhHhccEEEEeeCCCCHHHHHHHHHHHHHHhc
Q 022556 58 KKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFA 94 (295)
Q Consensus 58 ~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~ 94 (295)
+++.+.+.+.||+.|.+- ++.+.++++.+...++++
T Consensus 22 ~~~~~~f~~dGyvvl~~~-l~~e~v~~l~~~~~~~~~ 57 (288)
T 2rdq_A 22 AALDSFYEEHGYLFLRNV-LDRDLVKTVAEQMREGLV 57 (288)
T ss_dssp HHHHHHHHHHSEEEECSC-SCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCEEEEeCC-CCHHHHHHHHHHHHHHHH
Confidence 457788889999999876 889999999988887754
No 31
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=23.51 E-value=1e+02 Score=22.53 Aligned_cols=39 Identities=15% Similarity=0.275 Sum_probs=27.7
Q ss_pred CCc-eeecCCCCCCcchHHHHHHHHHHHhHhccEEEEeeCCCCHH
Q 022556 37 EIP-VISLAGIDDVGGKRAEICKKIVEACEDWGIFQVVDHGVDAK 80 (295)
Q Consensus 37 ~iP-vIDls~l~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~ 80 (295)
+-| |||++.+.. ..+ ..+|.+.|+++|+..+--.|.+.+
T Consensus 47 ~aPVVlDl~~l~~-~~d----l~~L~~~l~~~gl~~vGV~g~~~~ 86 (120)
T 3ghf_A 47 HAPVVINVSGLES-PVN----WPELHKIVTSTGLRIIGVSGCKDA 86 (120)
T ss_dssp TCEEEEEEEECCS-SCC----HHHHHHHHHTTTCEEEEEESCCCH
T ss_pred CCcEEEEccccCC-hHH----HHHHHHHHHHcCCEEEEEeCCCcH
Confidence 445 579998852 122 467899999999999876765543
No 32
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=21.86 E-value=82 Score=19.15 Aligned_cols=23 Identities=13% Similarity=0.397 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHHHHhcCCChHH
Q 022556 163 KLMGVACKLLEVLSEAMGLEKEA 185 (295)
Q Consensus 163 ~~~~l~~~ll~~l~~~Lgl~~~~ 185 (295)
.-.+++..|.+++++.||.|+++
T Consensus 18 ~k~~l~~~l~~~l~~~lg~p~~~ 40 (63)
T 2x4k_A 18 QLKNLVSEVTDAVEKTTGANRQA 40 (63)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGG
T ss_pred HHHHHHHHHHHHHHHHhCcCccc
Confidence 34678888999999999999753
No 33
>2do1_A Nuclear protein HCC-1; SAP domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.140.2.1
Probab=21.81 E-value=1e+02 Score=19.29 Aligned_cols=39 Identities=15% Similarity=0.346 Sum_probs=26.8
Q ss_pred eeecCCCCCCcchHHHHHHHHHHHhHhccEEEEeeCCCCHHHHHHHHHHHH
Q 022556 40 VISLAGIDDVGGKRAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLAT 90 (295)
Q Consensus 40 vIDls~l~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~ 90 (295)
++|++.+. ++.|.+.|+..| |.-.|.-.++++++.....
T Consensus 7 ~~~l~klk---------V~eLK~~L~~rG---L~~~G~KaeLieRL~~~l~ 45 (55)
T 2do1_A 7 GVELHKLK---------LAELKQECLARG---LETKGIKQDLIHRLQAYLE 45 (55)
T ss_dssp CCCTTTSC---------HHHHHHHHHHHT---CCCCSCHHHHHHHHHHHHH
T ss_pred ccCHHHCc---------HHHHHHHHHHcC---CCCCCcHHHHHHHHHHHHh
Confidence 46677764 578899999998 4445666777777665433
No 34
>1y66_A Engrailed homeodomain; protein design, dioxane, de novo protein; 1.65A {Escherichia coli} PDB: 2p6j_A
Probab=20.90 E-value=1.1e+02 Score=18.01 Aligned_cols=37 Identities=16% Similarity=0.275 Sum_probs=29.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHH
Q 022556 153 WMEVTKEYSDKLMGVACKLLEVLSEAMGLEKEALTKA 189 (295)
Q Consensus 153 fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~~~~~~ 189 (295)
-...+.+|.++-.++...-+...+.-||+....+...
T Consensus 8 verklkefvrrhqeitqetlheyaqklglnqqaieqf 44 (52)
T 1y66_A 8 VERKLKEFVRRHQEITQETLHEYAQKLGLNQQAIEQF 44 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHH
Confidence 3557888999999999999999999999876544433
No 35
>1v7z_A Creatininase, creatinine amidohydrolase; Mn-activated creatininase, substrate complex; 1.60A {Pseudomonas SP} SCOP: c.125.1.1 PDB: 1j2u_A 1j2t_A 3a6d_A 3a6j_A 3a6k_A 3a6l_A 3a6g_A 3a6f_A 3a6e_A 3a6h_A 1q3k_A
Probab=20.73 E-value=1.6e+02 Score=24.52 Aligned_cols=37 Identities=11% Similarity=0.157 Sum_probs=28.2
Q ss_pred chHHHHHHHHHHHhHhcc---EEEEeeCCCCHHHHHHHHH
Q 022556 51 GKRAEICKKIVEACEDWG---IFQVVDHGVDAKLISDMTR 87 (295)
Q Consensus 51 ~~~~~~~~~l~~A~~~~G---ff~l~nhgi~~~~~~~~~~ 87 (295)
+.....+..+.+++.++| ++.|.+||=....++.+.+
T Consensus 93 ~tl~~~l~di~~sl~~~GfrrivivNgHGGN~~~l~~a~~ 132 (260)
T 1v7z_A 93 ATLTGTVQDIIRELARHGARRLVLMNGHYENSMFIVEGID 132 (260)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEEEECSGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEEcCCCCcHHHHHHHHH
Confidence 456688889999999999 6777789866666665554
No 36
>3ocr_A Class II aldolase/adducin domain protein; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, lyase; 1.95A {Pseudomonas syringae PV}
Probab=20.68 E-value=42 Score=28.53 Aligned_cols=50 Identities=12% Similarity=0.159 Sum_probs=33.5
Q ss_pred CCCceeecCCCCCCcchHHHHHHHHHHHhHhccEEEEeeCCCC--HHHHHHHHHHH
Q 022556 36 NEIPVISLAGIDDVGGKRAEICKKIVEACEDWGIFQVVDHGVD--AKLISDMTRLA 89 (295)
Q Consensus 36 ~~iPvIDls~l~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~--~~~~~~~~~~~ 89 (295)
..||++++..+.. ..++.+.+.+++.+.-.+.|.|||+= -+.+++++..+
T Consensus 155 g~v~~~~y~~~~~----~~el~~~i~~~l~~~~avlL~nHG~~~~G~tl~eA~~~~ 206 (273)
T 3ocr_A 155 GRVAYHGYEGIAL----DLSERERLVADLGDKSVMILRNHGLLTGGVSVEHAIQQL 206 (273)
T ss_dssp TTEEEECCCCSSC----CHHHHHHHHHHHTTCSEEEETTTEEEEEESSHHHHHHHH
T ss_pred CCEEEECCCCCCC----CHHHHHHHHHHhCcCCEEEEcCCceEEecCCHHHHHHHH
Confidence 4699999876531 12456778888888889999999963 22344444433
No 37
>3m0z_A Putative aldolase; MCSG, PSI-2, structural genomics, protein structure initiative, midwest center for structural genomics, lyase; HET: MSE; 1.20A {Klebsiella pneumoniae subsp} PDB: 3nzr_A 3lm7_A
Probab=20.57 E-value=1.1e+02 Score=25.40 Aligned_cols=38 Identities=18% Similarity=0.338 Sum_probs=28.9
Q ss_pred hHHHHHHHHHHHhHhccEEEEeeC-CCCHHHHHHHHHHHH
Q 022556 52 KRAEICKKIVEACEDWGIFQVVDH-GVDAKLISDMTRLAT 90 (295)
Q Consensus 52 ~~~~~~~~l~~A~~~~Gff~l~nh-gi~~~~~~~~~~~~~ 90 (295)
...++...+.+||.+.|| ++.-. ||+.+-+..+++.+.
T Consensus 171 ~~l~E~~avAka~a~~g~-~lEPTGGIdl~N~~~I~~i~l 209 (249)
T 3m0z_A 171 KHRAEFEAVAKACAAHDF-WLEPTGGIDLENYSEILKIAL 209 (249)
T ss_dssp TTHHHHHHHHHHHHHTTC-EEEEBSSCCTTTHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHcCc-eECCCCCccHhhHHHHHHHHH
Confidence 345667899999999999 77755 799776766666554
No 38
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=20.55 E-value=82 Score=19.44 Aligned_cols=22 Identities=23% Similarity=0.206 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHHHhcCCChHH
Q 022556 164 LMGVACKLLEVLSEAMGLEKEA 185 (295)
Q Consensus 164 ~~~l~~~ll~~l~~~Lgl~~~~ 185 (295)
-.++...|.+++++.||+++++
T Consensus 17 k~~l~~~lt~~l~~~lg~~~~~ 38 (64)
T 3abf_A 17 KRELVRRLTEMASRLLGEPYEE 38 (64)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGG
T ss_pred HHHHHHHHHHHHHHHhCCCccc
Confidence 3678888999999999998754
No 39
>2j01_J 50S ribosomal protein L10; ribosome, tRNA, paromomycin, mRNA, translation; 2.8A {Thermus thermophilus} PDB: 2j03_J 3d5b_J 3d5d_J 3i8i_Y 3kir_J 3kit_J 3kiw_J 3kiy_J 3mrz_I 3ms1_I 3pyt_I 3pyr_I 3pyo_I 3pyv_I
Probab=20.45 E-value=2.1e+02 Score=22.15 Aligned_cols=39 Identities=21% Similarity=0.273 Sum_probs=27.0
Q ss_pred hHHHHHHHHHHHhHhcc-EEEEee-CCCCHHHHHHHHHHHH
Q 022556 52 KRAEICKKIVEACEDWG-IFQVVD-HGVDAKLISDMTRLAT 90 (295)
Q Consensus 52 ~~~~~~~~l~~A~~~~G-ff~l~n-hgi~~~~~~~~~~~~~ 90 (295)
...+.+++|.+.+.++. .+++.+ +|++...+.++....+
T Consensus 5 ~K~~~v~el~~~l~~~~~~v~v~~~~gltv~~~~~LR~~lr 45 (173)
T 2j01_J 5 RNVELLATLKENLERAQGSFFLVNYQGLPAKETHALRQALK 45 (173)
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEEcCCCCHHHHHHHHHHHH
Confidence 35567788888888887 666654 4888766666665544
No 40
>1zav_A 50S ribosomal protein L10; ribosome structure and function, L10-L12 complex structure, L10E structure, L7/12 ribosomal stalk; 1.90A {Thermotoga maritima} SCOP: d.58.62.1 PDB: 1zaw_A 1zax_A
Probab=20.44 E-value=2.1e+02 Score=22.35 Aligned_cols=40 Identities=15% Similarity=0.258 Sum_probs=30.2
Q ss_pred hHHHHHHHHHHHhHhccEEEEeeC-CCCHHHHHHHHHHHHH
Q 022556 52 KRAEICKKIVEACEDWGIFQVVDH-GVDAKLISDMTRLATE 91 (295)
Q Consensus 52 ~~~~~~~~l~~A~~~~Gff~l~nh-gi~~~~~~~~~~~~~~ 91 (295)
...+.+++|.+.+.++..+++.++ |++...+.++....+.
T Consensus 7 ~K~~~v~el~~~l~~~~~v~v~~~~gltv~q~~~LR~~lr~ 47 (180)
T 1zav_A 7 QKELIVKEMSEIFKKTSLILFADFLGFTVADLTELRSRLRE 47 (180)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCEEEEEEeCCCCHHHHHHHHHHHHh
Confidence 456778889999998888888755 8988777777766554
No 41
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=20.19 E-value=1e+02 Score=25.86 Aligned_cols=36 Identities=14% Similarity=0.119 Sum_probs=30.0
Q ss_pred HHHHHhHhccEEEEeeCCCCHHHHHHHHHHHHHHhcC
Q 022556 59 KIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFAL 95 (295)
Q Consensus 59 ~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~l 95 (295)
+..+.+.+.||+.|.+- ++.+.++++.+...++++.
T Consensus 7 e~~~~f~~dGyvvl~~~-l~~e~v~~l~~~~~~~~~~ 42 (291)
T 2opw_A 7 SQLQKFQQDGFLVLEGF-LSAEECVAMQQRIGEIVAE 42 (291)
T ss_dssp HHHHHHHHHSEEEETTS-SCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhCCEEEecCC-CCHHHHHHHHHHHHHHHhh
Confidence 45677889999999876 8899999999998888753
Done!