BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022557
(295 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225429480|ref|XP_002277742.1| PREDICTED: histone deacetylase 2 [Vitis vinifera]
gi|296081627|emb|CBI20632.3| unnamed protein product [Vitis vinifera]
Length = 359
Score = 495 bits (1275), Expect = e-138, Method: Compositional matrix adjust.
Identities = 232/278 (83%), Positives = 259/278 (93%)
Query: 14 ETLKRNRILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGF 73
ETL+R RILSSKLYFD+P+ K+P+IYS YDI+FLG+EKLHPFDSSKWGRIC+FL +G
Sbjct: 21 ETLRRGRILSSKLYFDVPLTKVPIIYSSSYDIAFLGMEKLHPFDSSKWGRICRFLILDGA 80
Query: 74 LDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPF 133
L+KN IVEPLEASK+DLLVVHSESYL SL++S NV++IIEVPPVAL PNCLVQ+KVLYPF
Sbjct: 81 LEKNHIVEPLEASKDDLLVVHSESYLNSLKTSLNVAVIIEVPPVALLPNCLVQQKVLYPF 140
Query: 134 RKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRV 193
RKQVGGTILAAKLAKERGWAINVGGGFHHCSA +GGGFCAYADISLCIHYAF++LNISRV
Sbjct: 141 RKQVGGTILAAKLAKERGWAINVGGGFHHCSAGKGGGFCAYADISLCIHYAFIRLNISRV 200
Query: 194 MIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYL 253
MIIDLDAHQGNGHE DFS+D RVYILDM+NPGIYP D+EARR+IDQKVEVVSGTTTNEYL
Sbjct: 201 MIIDLDAHQGNGHELDFSNDRRVYILDMYNPGIYPSDFEARRYIDQKVEVVSGTTTNEYL 260
Query: 254 KKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
KLDEAL+VAG FDPELV+YNAGTDIL+GDPLG LK+
Sbjct: 261 TKLDEALKVAGRMFDPELVVYNAGTDILDGDPLGRLKI 298
>gi|255550810|ref|XP_002516453.1| histone deacetylase, putative [Ricinus communis]
gi|223544273|gb|EEF45794.1| histone deacetylase, putative [Ricinus communis]
Length = 342
Score = 492 bits (1266), Expect = e-137, Method: Compositional matrix adjust.
Identities = 231/290 (79%), Positives = 261/290 (90%)
Query: 2 SSSSSPSVTTDAETLKRNRILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKW 61
S S S T D+ TL+RNRI+SSKLYFDIP+ K+P+IYSP YDISFLGIEKLHPFDSSKW
Sbjct: 16 SRQMSSSTTADSLTLRRNRIISSKLYFDIPLSKVPIIYSPAYDISFLGIEKLHPFDSSKW 75
Query: 62 GRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFP 121
GR+C+FL +EG LDKN IVEPLEASK+DLLVVH ESYL SL+SS NV+ IIEVPPV+LFP
Sbjct: 76 GRVCRFLVTEGVLDKNSIVEPLEASKDDLLVVHLESYLSSLRSSANVATIIEVPPVSLFP 135
Query: 122 NCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCI 181
NCLVQ+KVL+PFRKQVGGTILAAKLAKERGWAINVGGGFHHCS+ +GGGFCAYADISLCI
Sbjct: 136 NCLVQQKVLFPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSSGKGGGFCAYADISLCI 195
Query: 182 HYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKV 241
H+AFV+L ISRVMIIDLDAHQGNGHE DF D+R+YILDM+NPGIYP DYEAR +IDQKV
Sbjct: 196 HFAFVRLRISRVMIIDLDAHQGNGHEMDFYDDNRIYILDMYNPGIYPLDYEARNYIDQKV 255
Query: 242 EVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
E+ SGT T+EYL++LDEALEVA FDPELV+YNAGTDIL+GDPLG LK+
Sbjct: 256 EIASGTRTDEYLRELDEALEVADQKFDPELVVYNAGTDILDGDPLGRLKI 305
>gi|356564065|ref|XP_003550277.1| PREDICTED: histone deacetylase 2-like [Glycine max]
Length = 348
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 234/291 (80%), Positives = 259/291 (89%), Gaps = 4/291 (1%)
Query: 1 MSSSSSPSVTTDAETLKRNRILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSK 60
MSSSS+ DAE L+RNRILSSKLYFD+ K+PLIYS YDI FLGIEKLHPFDSSK
Sbjct: 1 MSSSSA----NDAEALRRNRILSSKLYFDVSPSKVPLIYSASYDIEFLGIEKLHPFDSSK 56
Query: 61 WGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALF 120
WGRIC FL S G LDK C+VEPLEASK+DLLVVHSESYL +L+ S V++I+EVPPVAL
Sbjct: 57 WGRICGFLVSFGILDKKCVVEPLEASKDDLLVVHSESYLNTLKQSSKVAMIVEVPPVALI 116
Query: 121 PNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLC 180
PNCLVQ+KVL+PFRKQVGGTILAAKLAKERGWAIN+GGGFHHCSA +GGGFCAYADISLC
Sbjct: 117 PNCLVQQKVLFPFRKQVGGTILAAKLAKERGWAINMGGGFHHCSAQKGGGFCAYADISLC 176
Query: 181 IHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQK 240
IH+AFV+LNISRVMIIDLDAHQGNGHE DF+ DSRVYILDM+NPGIYP DYEAR +I+QK
Sbjct: 177 IHFAFVRLNISRVMIIDLDAHQGNGHEMDFAYDSRVYILDMYNPGIYPLDYEARNYINQK 236
Query: 241 VEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
VEV SGT T EYL+KLDEALEVAGH F+PELVIYNAGTDILEGDPLG L++
Sbjct: 237 VEVKSGTVTEEYLQKLDEALEVAGHRFNPELVIYNAGTDILEGDPLGRLEI 287
>gi|357437493|ref|XP_003589022.1| Histone deacetylase [Medicago truncatula]
gi|355478070|gb|AES59273.1| Histone deacetylase [Medicago truncatula]
Length = 350
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 235/288 (81%), Positives = 258/288 (89%)
Query: 4 SSSPSVTTDAETLKRNRILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGR 63
SS PS + +TL RNRILS+KLYFD+P K+PLIYS YDISFLGIEKLHPFDSSKWGR
Sbjct: 2 SSPPSCSAADDTLMRNRILSTKLYFDVPPSKVPLIYSDSYDISFLGIEKLHPFDSSKWGR 61
Query: 64 ICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNC 123
IC+FL S G LDKN IVEPLEASK+DLLVVHSESYL SL+ S NV+ IIEVPPVALFPNC
Sbjct: 62 ICKFLISFGVLDKNRIVEPLEASKDDLLVVHSESYLNSLKESSNVAKIIEVPPVALFPNC 121
Query: 124 LVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHY 183
LVQRKVL+PFRKQVGGTILAAKLAKERGWAINVGGGFHHCSA+ GGGFCAYADISLCIH+
Sbjct: 122 LVQRKVLFPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSAENGGGFCAYADISLCIHF 181
Query: 184 AFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
AFVQLNISRV+IIDLDAHQGNGHE DF+ D+RVYILDM+NPGIYP D+EAR +I+QKVEV
Sbjct: 182 AFVQLNISRVIIIDLDAHQGNGHEMDFADDNRVYILDMYNPGIYPLDHEARSYINQKVEV 241
Query: 244 VSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
SGT T EYL KLDEALEVAG F+PEL++YNAGTDILEGDPLG LK+
Sbjct: 242 KSGTRTEEYLLKLDEALEVAGRRFNPELLVYNAGTDILEGDPLGRLKI 289
>gi|388493714|gb|AFK34923.1| unknown [Lotus japonicus]
Length = 348
Score = 486 bits (1251), Expect = e-135, Method: Compositional matrix adjust.
Identities = 238/291 (81%), Positives = 256/291 (87%), Gaps = 3/291 (1%)
Query: 1 MSSSSSPSVTTDAETLKRNRILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSK 60
MSSSSS TDA L RNRILSSKLYFD+P K+PLIYS YDISFLGIEKLHPFDSSK
Sbjct: 1 MSSSSS---GTDALALARNRILSSKLYFDVPPSKVPLIYSESYDISFLGIEKLHPFDSSK 57
Query: 61 WGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALF 120
WGRIC FL S LDK CIVEPLEASK+DLLVVHSESYL SL+ S NV+ IIEVPPVALF
Sbjct: 58 WGRICGFLVSFDVLDKKCIVEPLEASKDDLLVVHSESYLNSLKESSNVATIIEVPPVALF 117
Query: 121 PNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLC 180
PNCLVQ KVL+PFRKQVGGTILA KLAKERGWAINVGGGFHHCSA++GGGFCAYADISLC
Sbjct: 118 PNCLVQNKVLFPFRKQVGGTILAVKLAKERGWAINVGGGFHHCSAEKGGGFCAYADISLC 177
Query: 181 IHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQK 240
IH+AFV+LNISRVMIIDLDAHQGNGHE DF+ DSRVYILDM+NPGIYP DY+AR +I+QK
Sbjct: 178 IHFAFVRLNISRVMIIDLDAHQGNGHETDFADDSRVYILDMYNPGIYPWDYDARNYINQK 237
Query: 241 VEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
VEV SGT T EYL+KLDEALEVA F PELVIYNAGTDIL+GDPLG LK+
Sbjct: 238 VEVKSGTLTEEYLQKLDEALEVAARRFKPELVIYNAGTDILDGDPLGRLKI 288
>gi|449447110|ref|XP_004141312.1| PREDICTED: histone deacetylase 2-like [Cucumis sativus]
gi|449486647|ref|XP_004157356.1| PREDICTED: histone deacetylase 2-like [Cucumis sativus]
Length = 351
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 222/291 (76%), Positives = 253/291 (86%), Gaps = 1/291 (0%)
Query: 1 MSSSSSPSVTTDAETLKRNRILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSK 60
MSSS SP D E ++R+RILSSKLYFD+P K+P+IYS YDISFLGIEKLHPFDS K
Sbjct: 1 MSSSLSPD-ANDGEAVRRDRILSSKLYFDVPSSKVPVIYSSSYDISFLGIEKLHPFDSKK 59
Query: 61 WGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALF 120
WGR+CQFL + G L K+ I++PLEA K DLLVVH ESYL SL++S NV+ IIEVPPVALF
Sbjct: 60 WGRVCQFLIAAGVLRKDQIIKPLEAKKNDLLVVHPESYLNSLKNSSNVAKIIEVPPVALF 119
Query: 121 PNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLC 180
P+C+V+ KV PFR QVGG+ILA K+AKE+GWAINVGGGFHHCSA+ GGGFC YADISLC
Sbjct: 120 PHCVVKEKVQRPFRNQVGGSILAGKVAKEKGWAINVGGGFHHCSAERGGGFCVYADISLC 179
Query: 181 IHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQK 240
IHYAFVQLNIS+ MIIDLDAHQGNGHE DF+ D RVYILDMFNPGIYP DYEARR IDQK
Sbjct: 180 IHYAFVQLNISKAMIIDLDAHQGNGHEMDFAHDRRVYILDMFNPGIYPFDYEARRCIDQK 239
Query: 241 VEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
VEVVSGTTT+EYLKKLDEALEVA ++DPEL++YNAGTDIL+GDPLG+LK+
Sbjct: 240 VEVVSGTTTSEYLKKLDEALEVAATSYDPELIVYNAGTDILDGDPLGLLKI 290
>gi|297812823|ref|XP_002874295.1| hypothetical protein ARALYDRAFT_489451 [Arabidopsis lyrata subsp.
lyrata]
gi|297320132|gb|EFH50554.1| hypothetical protein ARALYDRAFT_489451 [Arabidopsis lyrata subsp.
lyrata]
Length = 387
Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust.
Identities = 220/290 (75%), Positives = 252/290 (86%)
Query: 2 SSSSSPSVTTDAETLKRNRILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKW 61
S SS S+ T E L+R RIL+SKLYFD+P+ K+ +IYS YDISF+GIEKLHPFDSSKW
Sbjct: 41 SEMSSFSMATHPEALRRERILNSKLYFDVPLSKVSIIYSSAYDISFMGIEKLHPFDSSKW 100
Query: 62 GRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFP 121
GR+C+FL S+GFL++ IVEPLEASK DLLVVHSE+YL SL+SS V+ I EVPPVA FP
Sbjct: 101 GRVCKFLVSDGFLEEKAIVEPLEASKIDLLVVHSENYLNSLKSSATVARITEVPPVAFFP 160
Query: 122 NCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCI 181
N LVQ+KVLYPFRKQVGGTILAAKLA ERGWAIN+GGGFHHC+A+ GGGFCA+ADISLCI
Sbjct: 161 NFLVQQKVLYPFRKQVGGTILAAKLATERGWAINIGGGFHHCTAERGGGFCAFADISLCI 220
Query: 182 HYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKV 241
H+AF++L ISRVMIIDLDAHQGNGHE D D+RVYILDM+NP IYP DY ARRFIDQ +
Sbjct: 221 HFAFLRLRISRVMIIDLDAHQGNGHETDLGDDNRVYILDMYNPNIYPFDYRARRFIDQNI 280
Query: 242 EVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
EVVSGTTT+EYL+KLDEALEVA F PELVIYNAGTDIL+GDPLG+LK+
Sbjct: 281 EVVSGTTTDEYLRKLDEALEVASRNFQPELVIYNAGTDILDGDPLGLLKI 330
>gi|30690103|ref|NP_568480.2| histone deacetylase 2 [Arabidopsis thaliana]
gi|145558941|sp|Q944K3.2|HDA2_ARATH RecName: Full=Histone deacetylase 2
gi|332006134|gb|AED93517.1| histone deacetylase 2 [Arabidopsis thaliana]
Length = 387
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 220/290 (75%), Positives = 252/290 (86%)
Query: 2 SSSSSPSVTTDAETLKRNRILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKW 61
S SS S+ T E L+R RIL+SKLYFD+P+ K+ +IYS YDISF+GIEKLHPFDSSKW
Sbjct: 41 SEISSFSMATHPEALRRERILNSKLYFDVPLSKVSIIYSSSYDISFMGIEKLHPFDSSKW 100
Query: 62 GRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFP 121
GR+C+FL S+GFL++ IVEPLEASK DLLVVHSE+YL SL+SS V+ I EV PVA FP
Sbjct: 101 GRVCKFLVSDGFLEEKAIVEPLEASKIDLLVVHSENYLNSLKSSATVARITEVAPVAFFP 160
Query: 122 NCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCI 181
N LVQ+KVLYPFRKQVGGTILAAKLA ERGWAIN+GGGFHHC+A+ GGGFCA+ADISLCI
Sbjct: 161 NFLVQQKVLYPFRKQVGGTILAAKLATERGWAINIGGGFHHCTAERGGGFCAFADISLCI 220
Query: 182 HYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKV 241
H+AF++L ISRVMIIDLDAHQGNGHE D D+RVYILDM+NP IYP DY ARRFIDQKV
Sbjct: 221 HFAFLRLRISRVMIIDLDAHQGNGHETDLGDDNRVYILDMYNPEIYPFDYRARRFIDQKV 280
Query: 242 EVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
EV+SGTTT+EYL+KLDEALEVA F PELVIYNAGTDIL+GDPLG+LK+
Sbjct: 281 EVMSGTTTDEYLRKLDEALEVASRNFQPELVIYNAGTDILDGDPLGLLKI 330
>gi|21105771|gb|AAM34784.1|AF510671_1 HDA2 [Arabidopsis thaliana]
Length = 340
Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust.
Identities = 216/283 (76%), Positives = 248/283 (87%)
Query: 9 VTTDAETLKRNRILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFL 68
+ T E L+R RIL+SKLYFD+P+ K+ +IYS YDISF+GIEKLHPFDSSKWGR+C+FL
Sbjct: 1 MATHPEALRRERILNSKLYFDVPLSKVSIIYSSSYDISFMGIEKLHPFDSSKWGRVCKFL 60
Query: 69 SSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRK 128
S+GFL++ IVEPLEASK DLLVVHSE+YL SL+SS V+ I EV PVA FPN LVQ+K
Sbjct: 61 VSDGFLEEKAIVEPLEASKIDLLVVHSENYLNSLKSSATVARITEVAPVAFFPNFLVQQK 120
Query: 129 VLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL 188
VLYPFRKQVGGTILAAKLA ERGWAIN+GGGFHHC+A+ GGGFCA+ADISLCIH+AF++L
Sbjct: 121 VLYPFRKQVGGTILAAKLATERGWAINIGGGFHHCTAERGGGFCAFADISLCIHFAFLRL 180
Query: 189 NISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTT 248
ISRVMIIDLDAHQGNGHE D D+RVYILDM+NP IYP DY ARRFIDQKVEV+SGTT
Sbjct: 181 RISRVMIIDLDAHQGNGHETDLGDDNRVYILDMYNPEIYPFDYRARRFIDQKVEVMSGTT 240
Query: 249 TNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
T+EYL+KLDEALEVA F PELVIYNAGTDIL+GDPLG+LK+
Sbjct: 241 TDEYLRKLDEALEVASRNFQPELVIYNAGTDILDGDPLGLLKI 283
>gi|326522206|dbj|BAK04231.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 352
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 213/293 (72%), Positives = 258/293 (88%), Gaps = 2/293 (0%)
Query: 1 MSSSSSPSVT--TDAETLKRNRILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDS 58
MSSSS+ +V T A+ L+RNRILSSKLYFD+P K P++YS YDI+FLGIEK+HPFDS
Sbjct: 1 MSSSSAAAVPGGTPADALRRNRILSSKLYFDVPGSKAPVVYSTAYDIAFLGIEKMHPFDS 60
Query: 59 SKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVA 118
SKWGRIC+FL+ EG L+KN +VEPLEAS+EDLLVVH+E+YL SL+SS V+ I+EVPP+
Sbjct: 61 SKWGRICRFLTKEGHLEKNRVVEPLEASQEDLLVVHTEAYLNSLRSSFRVAAIVEVPPLT 120
Query: 119 LFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADIS 178
L PN LVQ+++LYPFRKQVGG+IL+AKLA ERGWAINVGGGFHHCSA+EGGGFCAYADIS
Sbjct: 121 LIPNWLVQQRLLYPFRKQVGGSILSAKLALERGWAINVGGGFHHCSAEEGGGFCAYADIS 180
Query: 179 LCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFID 238
LCI +AFV+LNISRVMIIDL AHQGNG+EKDF++D RVYILDM+N GIYP DY A+R+ID
Sbjct: 181 LCIQFAFVRLNISRVMIIDLGAHQGNGYEKDFANDGRVYILDMYNAGIYPFDYAAKRYID 240
Query: 239 QKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
QK+E+VSGT T++YL +LD+AL+VA F P+L+IYNAGTDIL+GDPLG LK+
Sbjct: 241 QKIELVSGTETDDYLDQLDKALKVAQTRFQPQLIIYNAGTDILDGDPLGNLKI 293
>gi|242096222|ref|XP_002438601.1| hypothetical protein SORBIDRAFT_10g022550 [Sorghum bicolor]
gi|241916824|gb|EER89968.1| hypothetical protein SORBIDRAFT_10g022550 [Sorghum bicolor]
Length = 350
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 207/291 (71%), Positives = 252/291 (86%)
Query: 1 MSSSSSPSVTTDAETLKRNRILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSK 60
M+SSSSP+ T E L++ RILSSKLY ++P K P++YSP YDISFLG+EKLHPFDS+K
Sbjct: 1 MASSSSPAPTLAGEALRQKRILSSKLYLEVPSSKAPVVYSPAYDISFLGLEKLHPFDSAK 60
Query: 61 WGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALF 120
WGRIC++L+ EG+LDK +V+PLEA KEDLLVVH+E+YL SL+SS VS I+EVPPV+L
Sbjct: 61 WGRICRYLTREGYLDKKRMVDPLEACKEDLLVVHTEAYLNSLKSSFRVSNIVEVPPVSLV 120
Query: 121 PNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLC 180
PN +V +K+LYPFRKQVGG+IL+AKLA ERGWAINVGGGFHHCSADEGGGFCAYADISLC
Sbjct: 121 PNWIVHKKLLYPFRKQVGGSILSAKLALERGWAINVGGGFHHCSADEGGGFCAYADISLC 180
Query: 181 IHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQK 240
I +AF +LNIS V+IIDLDAHQGNGHEKDF++D RVYI DM+N GIYP D+ A+++IDQK
Sbjct: 181 IQFAFARLNISSVLIIDLDAHQGNGHEKDFANDGRVYIFDMYNAGIYPFDFTAKQYIDQK 240
Query: 241 VEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
VE+ SGT T+EYL++LD+ALEV F P+L++YNAGTDIL+GDPLG LKV
Sbjct: 241 VELASGTETDEYLEQLDKALEVCNSRFQPQLIVYNAGTDILDGDPLGRLKV 291
>gi|115468630|ref|NP_001057914.1| Os06g0571100 [Oryza sativa Japonica Group]
gi|54291235|dbj|BAD61930.1| putative HDA2 [Oryza sativa Japonica Group]
gi|113595954|dbj|BAF19828.1| Os06g0571100 [Oryza sativa Japonica Group]
gi|125555796|gb|EAZ01402.1| hypothetical protein OsI_23434 [Oryza sativa Indica Group]
gi|215704748|dbj|BAG94776.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 352
Score = 446 bits (1147), Expect = e-123, Method: Compositional matrix adjust.
Identities = 206/278 (74%), Positives = 247/278 (88%)
Query: 14 ETLKRNRILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGF 73
+ L+R+RILSSKLY D+P K P++YSP YDI+FLGIEKLHPFDSSKWGRIC+FL+ EG
Sbjct: 16 DPLRRDRILSSKLYLDVPGSKAPVVYSPAYDIAFLGIEKLHPFDSSKWGRICKFLTKEGH 75
Query: 74 LDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPF 133
L+KN +VEPLEA+K+DLLVVHSESYL SL+SS V+ I+E+PPVA PN LVQ+K+LYPF
Sbjct: 76 LEKNRVVEPLEATKDDLLVVHSESYLNSLKSSLKVASIVELPPVAFIPNWLVQQKLLYPF 135
Query: 134 RKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRV 193
RKQVGG+IL+AKLA ERGWAINVGGGFHHCSA++GGGFCAYADISLCI +AFV+LNISRV
Sbjct: 136 RKQVGGSILSAKLALERGWAINVGGGFHHCSAEQGGGFCAYADISLCIQFAFVRLNISRV 195
Query: 194 MIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYL 253
MIIDLDAHQGNGHEKDF++D RVY LDM+N GIYP D+ A+R+IDQKVE+VSGT T +YL
Sbjct: 196 MIIDLDAHQGNGHEKDFANDGRVYTLDMYNAGIYPYDHVAKRYIDQKVELVSGTKTEDYL 255
Query: 254 KKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+LD+AL+VA F P+L++YNAGTDIL+GDPLG LK+
Sbjct: 256 DQLDKALKVAESRFQPQLIVYNAGTDILDGDPLGRLKI 293
>gi|357124055|ref|XP_003563722.1| PREDICTED: histone deacetylase 2-like [Brachypodium distachyon]
Length = 352
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 205/278 (73%), Positives = 247/278 (88%)
Query: 14 ETLKRNRILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGF 73
+ L+ NRILSSKLY D+P K+P+IYS YDI+FLGIEKLHPFDS+KWGRIC+FL+ EG
Sbjct: 16 DLLRHNRILSSKLYLDVPPSKVPVIYSVAYDIAFLGIEKLHPFDSAKWGRICKFLTKEGH 75
Query: 74 LDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPF 133
L+KN +VEPLEASKEDLLVVH++SYL SL++S V+ I+EVPPV+L PN LVQ+K+L+PF
Sbjct: 76 LEKNRVVEPLEASKEDLLVVHTQSYLNSLKTSFRVATIMEVPPVSLIPNWLVQQKLLFPF 135
Query: 134 RKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRV 193
RKQVGG+IL+AKLA ERGWAINVGGGFHHCSA+EGGGFCAYADISLCI +AF +LNISRV
Sbjct: 136 RKQVGGSILSAKLALERGWAINVGGGFHHCSAEEGGGFCAYADISLCIQFAFDRLNISRV 195
Query: 194 MIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYL 253
MIIDLDAHQGNGHEKDF+ D RVYILDM+N GIYP D+ A+R+IDQKVE+VSGT T++YL
Sbjct: 196 MIIDLDAHQGNGHEKDFADDGRVYILDMYNAGIYPFDHAAKRYIDQKVELVSGTKTDDYL 255
Query: 254 KKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+LD+ALEVA F P+L++YNAGTDIL+GDPLG L++
Sbjct: 256 DQLDQALEVAQTRFQPQLIVYNAGTDILDGDPLGRLEI 293
>gi|195622418|gb|ACG33039.1| histone deacetylase 11 [Zea mays]
Length = 352
Score = 439 bits (1128), Expect = e-121, Method: Compositional matrix adjust.
Identities = 201/279 (72%), Positives = 247/279 (88%)
Query: 13 AETLKRNRILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEG 72
E L++ RILSSKLY ++P K P++YSP YDISFLG+EKLHPF+S+KWGRIC++L+ EG
Sbjct: 15 GEALRQKRILSSKLYLEVPSSKAPVVYSPAYDISFLGLEKLHPFESAKWGRICRYLTREG 74
Query: 73 FLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYP 132
+LDK +VEPLEA KEDLLVVH+E+YL SL+ S VS I+EVPPV+L PN +V RK+L+P
Sbjct: 75 YLDKKRMVEPLEACKEDLLVVHTEAYLNSLKCSFRVSSIVEVPPVSLVPNWIVHRKLLHP 134
Query: 133 FRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISR 192
FRKQVGG+IL+AKLA ERGWAINVGGGFHHCSADEGGGFCAYADISLCIH+AFV+LNIS
Sbjct: 135 FRKQVGGSILSAKLAFERGWAINVGGGFHHCSADEGGGFCAYADISLCIHFAFVRLNISS 194
Query: 193 VMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEY 252
V+IIDLDAHQGNGHEKDF++D RVYILDM+N GIYP D+ A+++IDQKVE+VSG+ T+EY
Sbjct: 195 VLIIDLDAHQGNGHEKDFANDGRVYILDMYNAGIYPFDFTAKQYIDQKVELVSGSKTDEY 254
Query: 253 LKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
L++LD+ALE+ F+P+L++YNAGTDIL+GDPLG LKV
Sbjct: 255 LEQLDKALEICNSRFEPQLIVYNAGTDILDGDPLGRLKV 293
>gi|413954352|gb|AFW87001.1| histone deacetylase 11 [Zea mays]
Length = 351
Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust.
Identities = 200/279 (71%), Positives = 246/279 (88%)
Query: 13 AETLKRNRILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEG 72
E L++ RILSSKLY ++P K P++YSP YDISFLG+EKLHPF+S+KWGRIC++L+ EG
Sbjct: 14 GEALRQKRILSSKLYLEVPSSKAPVVYSPAYDISFLGLEKLHPFESAKWGRICRYLTREG 73
Query: 73 FLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYP 132
+LDK +VEPLEA KEDLLVVH+E+YL SL+ S VS I+EVPPV+L PN +V RK+L+P
Sbjct: 74 YLDKKQMVEPLEACKEDLLVVHTEAYLNSLKCSFRVSSIVEVPPVSLVPNWIVHRKLLHP 133
Query: 133 FRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISR 192
FRKQVGG+IL+AKLA ERGWAINVGGGFHHCSADEGGGFCAYADISLCI +AFV+LNIS
Sbjct: 134 FRKQVGGSILSAKLAFERGWAINVGGGFHHCSADEGGGFCAYADISLCIQFAFVRLNISS 193
Query: 193 VMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEY 252
V+IIDLDAHQGNGHEKDF++D RVYILDM+N GIYP D+ A+++IDQKVE+VSG+ T+EY
Sbjct: 194 VLIIDLDAHQGNGHEKDFANDGRVYILDMYNAGIYPFDFTAKQYIDQKVELVSGSKTDEY 253
Query: 253 LKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
L++LD+ALE+ F+P+L++YNAGTDIL+GDPLG LKV
Sbjct: 254 LEQLDKALEICNSRFEPQLIVYNAGTDILDGDPLGRLKV 292
>gi|222635776|gb|EEE65908.1| hypothetical protein OsJ_21754 [Oryza sativa Japonica Group]
Length = 421
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 193/256 (75%), Positives = 230/256 (89%)
Query: 36 PLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHS 95
P++YSP YDI+FLGIEKLHPFDSSKWGRIC+FL+ EG L+KN +VEPLEA+K+DLLVVHS
Sbjct: 107 PVVYSPAYDIAFLGIEKLHPFDSSKWGRICKFLTKEGHLEKNRVVEPLEATKDDLLVVHS 166
Query: 96 ESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAIN 155
ESYL SL+SS V+ I+E+PPVA PN LVQ+K+LYPFRKQVGG+IL+AKLA ERGWAIN
Sbjct: 167 ESYLNSLKSSLKVASIVELPPVAFIPNWLVQQKLLYPFRKQVGGSILSAKLALERGWAIN 226
Query: 156 VGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSR 215
VGGGFHHCSA++GGGFCAYADISLCI +AFV+LNISRVMIIDLDAHQGNGHEKDF++D R
Sbjct: 227 VGGGFHHCSAEQGGGFCAYADISLCIQFAFVRLNISRVMIIDLDAHQGNGHEKDFANDGR 286
Query: 216 VYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYN 275
VY LDM+N GIYP D+ A+R+IDQKVE+VSGT T +YL +LD+AL+VA F P+L++YN
Sbjct: 287 VYTLDMYNAGIYPYDHVAKRYIDQKVELVSGTKTEDYLDQLDKALKVAESRFQPQLIVYN 346
Query: 276 AGTDILEGDPLGMLKV 291
AGTDIL+GDPLG LK+
Sbjct: 347 AGTDILDGDPLGRLKI 362
>gi|242060988|ref|XP_002451783.1| hypothetical protein SORBIDRAFT_04g007780 [Sorghum bicolor]
gi|241931614|gb|EES04759.1| hypothetical protein SORBIDRAFT_04g007780 [Sorghum bicolor]
Length = 365
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 201/302 (66%), Positives = 241/302 (79%), Gaps = 14/302 (4%)
Query: 4 SSSPSVTTDAETLKRNRILSSKLYFD-IPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWG 62
+S+ T+ AE L+R RILSS+LY D +P K P++YSP YDI F GIEK HPFDS+KWG
Sbjct: 2 ASTSGDTSAAEALRRGRILSSRLYLDGVPSSKAPVVYSPAYDIEFNGIEKQHPFDSAKWG 61
Query: 63 RICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPN 122
R+ FL G L + I+EPLEAS++DLLVVHSESYL SL+SS V+ I+EVP VAL PN
Sbjct: 62 RVRNFLVDAGLLQNDRIIEPLEASEDDLLVVHSESYLNSLKSSAKVARIVEVPAVALLPN 121
Query: 123 CLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIH 182
LVQ+K+LYPFRKQVGG+IL+AKLA ERG AIN+GGGFHHCSA+EGGGFCAYADISLCIH
Sbjct: 122 LLVQQKLLYPFRKQVGGSILSAKLALERGCAINIGGGFHHCSAEEGGGFCAYADISLCIH 181
Query: 183 YAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP-------------R 229
+AFV+LNISRVMIIDLDAHQGNGHEKDF SD RVY LDM+N GIYP
Sbjct: 182 FAFVRLNISRVMIIDLDAHQGNGHEKDFGSDERVYTLDMYNSGIYPFCICLQSELPKSAN 241
Query: 230 DYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGML 289
D+ A+++IDQK+E+ SGT T +YL+ LD+AL+VA F P+L++YNAGTDIL+GDPLG L
Sbjct: 242 DHVAKKYIDQKIELHSGTKTEDYLEILDKALKVAESRFQPQLILYNAGTDILDGDPLGSL 301
Query: 290 KV 291
KV
Sbjct: 302 KV 303
>gi|30690100|ref|NP_851078.1| histone deacetylase 2 [Arabidopsis thaliana]
gi|332006133|gb|AED93516.1| histone deacetylase 2 [Arabidopsis thaliana]
Length = 359
Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust.
Identities = 197/290 (67%), Positives = 225/290 (77%), Gaps = 28/290 (9%)
Query: 2 SSSSSPSVTTDAETLKRNRILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKW 61
S SS S+ T E L+R RIL+SKLYFD+P+ K+ +IYS YDISF+GIEKLHPFDSSKW
Sbjct: 41 SEISSFSMATHPEALRRERILNSKLYFDVPLSKVSIIYSSSYDISFMGIEKLHPFDSSKW 100
Query: 62 GRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFP 121
GR+C+FL S+GFL++ IVEPLEASK DLLVVHSE+YL SL+SS V+ I EV PVA FP
Sbjct: 101 GRVCKFLVSDGFLEEKAIVEPLEASKIDLLVVHSENYLNSLKSSATVARITEVAPVAFFP 160
Query: 122 NCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCI 181
N LVQ+KVLYPFRKQVGGTILAAKLA ERGWAIN+GGGFHHC+A+ G
Sbjct: 161 NFLVQQKVLYPFRKQVGGTILAAKLATERGWAINIGGGFHHCTAERG------------- 207
Query: 182 HYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKV 241
DLDAHQGNGHE D D+RVYILDM+NP IYP DY ARRFIDQKV
Sbjct: 208 ---------------DLDAHQGNGHETDLGDDNRVYILDMYNPEIYPFDYRARRFIDQKV 252
Query: 242 EVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
EV+SGTTT+EYL+KLDEALEVA F PELVIYNAGTDIL+GDPLG+LK+
Sbjct: 253 EVMSGTTTDEYLRKLDEALEVASRNFQPELVIYNAGTDILDGDPLGLLKI 302
>gi|168036173|ref|XP_001770582.1| class III RPD3 type histone deacetylase protein [Physcomitrella
patens subsp. patens]
gi|162678103|gb|EDQ64565.1| class III RPD3 type histone deacetylase protein [Physcomitrella
patens subsp. patens]
Length = 357
Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust.
Identities = 184/288 (63%), Positives = 232/288 (80%), Gaps = 2/288 (0%)
Query: 6 SPSVTTDAETLK-RNRILSSKLYFDIPIF-KLPLIYSPDYDISFLGIEKLHPFDSSKWGR 63
S S+ + E K + RI +S LYF++P K P++YSP Y+ISFLG+EKLHPFDSSKWGR
Sbjct: 2 STSLRSQEELAKQKQRIDASGLYFNVPPGDKDPIVYSPSYNISFLGMEKLHPFDSSKWGR 61
Query: 64 ICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNC 123
+ +FL+ EG L++ IVEP+EA+++DLLVVHSE YL SL+ S V+ I EVPP+AL PN
Sbjct: 62 VQKFLADEGVLNRKRIVEPVEATRDDLLVVHSEEYLDSLKCSSVVAQIAEVPPIALLPNF 121
Query: 124 LVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHY 183
+VQ KVL PFRKQVGGT+L+AKLAKERGWAIN+GGGFHHC A EGGGFCA+ADISL I +
Sbjct: 122 VVQWKVLKPFRKQVGGTVLSAKLAKERGWAINIGGGFHHCCATEGGGFCAHADISLAIQF 181
Query: 184 AFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
A+ +L I+RVMIIDLDAHQGNGHE+DF +D RVYI+D++N IYP D+EA+R ++Q V +
Sbjct: 182 AYTRLGITRVMIIDLDAHQGNGHERDFMNDDRVYIVDLYNSDIYPWDHEAKRRMNQSVTL 241
Query: 244 VSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
SGT T++YL+ L +AL+ A F PELV+YNAG+DILEGDPLG L V
Sbjct: 242 KSGTKTDQYLELLSQALKKAEAIFKPELVVYNAGSDILEGDPLGRLLV 289
>gi|5107816|gb|AAD40129.1|AF149413_10 contains similarity to histone deacetylases; Pfam PF00850,
Score=13.3, E=5e-10, N=1 [Arabidopsis thaliana]
Length = 316
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/286 (66%), Positives = 220/286 (76%), Gaps = 30/286 (10%)
Query: 9 VTTDAETLKRNRILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFL 68
+ T E L+R RIL+SKLYFD+P+ K+ +IYS YDISF+GIEKLHPFDSSKWGR+C+FL
Sbjct: 1 MATHPEALRRERILNSKLYFDVPLSKVSIIYSSSYDISFMGIEKLHPFDSSKWGRVCKFL 60
Query: 69 SSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRK 128
S+GFL++ IVEPLEASK DLLVVHSE+YL SL+SS V+ I E
Sbjct: 61 VSDGFLEEKAIVEPLEASKIDLLVVHSENYLNSLKSSATVARITE--------------- 105
Query: 129 VLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL 188
VGGTILAAKLA ERGWAIN+GGGFHHC+A+ GGGFCA+ADISLCIH+AF++L
Sbjct: 106 --------VGGTILAAKLATERGWAINIGGGFHHCTAERGGGFCAFADISLCIHFAFLRL 157
Query: 189 NISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN---PGIYPRDYEARRFIDQKVEVVS 245
ISRVMIIDLDAHQGNGHE D D IL M I+ +DY ARRFIDQKVEV+S
Sbjct: 158 RISRVMIIDLDAHQGNGHETDLGDD----ILSMLAFEVRCIFLQDYRARRFIDQKVEVMS 213
Query: 246 GTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
GTTT+EYL+KLDEALEVA F PELVIYNAGTDIL+GDPLG+LK+
Sbjct: 214 GTTTDEYLRKLDEALEVASRNFQPELVIYNAGTDILDGDPLGLLKI 259
>gi|302804117|ref|XP_002983811.1| hypothetical protein SELMODRAFT_180494 [Selaginella moellendorffii]
gi|300148648|gb|EFJ15307.1| hypothetical protein SELMODRAFT_180494 [Selaginella moellendorffii]
Length = 350
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/290 (62%), Positives = 225/290 (77%), Gaps = 3/290 (1%)
Query: 3 SSSSPSVTTDAETLKRNRILSSKLYF-DIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKW 61
+SSS DA+ L R I +SKLY + K+P+IYS Y+I+FLG+EKLHPFDSSKW
Sbjct: 5 ASSSGGALYDAQRLAR--IKASKLYVSNASPGKVPVIYSAVYNIAFLGLEKLHPFDSSKW 62
Query: 62 GRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFP 121
GR+C+ L +G L+ I+EP EA+KEDLLVVH+ YL+SL+ S + I+EVPPVAL P
Sbjct: 63 GRVCELLIQKGELESRRIMEPGEATKEDLLVVHTPEYLESLKRSYVAASILEVPPVALLP 122
Query: 122 NCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCI 181
C+++ KVL PFRKQVGG++LA K+A ERGWAINVGGGFHHC GGGFC YADI+LCI
Sbjct: 123 YCIIRSKVLVPFRKQVGGSVLAGKVAYERGWAINVGGGFHHCCGYRGGGFCVYADITLCI 182
Query: 182 HYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKV 241
H+AF LNISR MI+DLDAHQGNGHE+DF+ D RV+I DM+N IYP DYEA+R+ID++V
Sbjct: 183 HFAFANLNISRAMIVDLDAHQGNGHERDFADDDRVFIFDMYNRDIYPLDYEAKRWIDRRV 242
Query: 242 EVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
E+ SGT T+ YL +L + LE A F P+L++YNAGTDILEGDPLG L+V
Sbjct: 243 EISSGTRTDSYLTRLKQELEGAFQAFAPDLLVYNAGTDILEGDPLGRLEV 292
>gi|168019285|ref|XP_001762175.1| class III RPD3 type histone deacetylase protein [Physcomitrella
patens subsp. patens]
gi|162686579|gb|EDQ72967.1| class III RPD3 type histone deacetylase protein [Physcomitrella
patens subsp. patens]
Length = 322
Score = 363 bits (932), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 167/256 (65%), Positives = 208/256 (81%)
Query: 36 PLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHS 95
P++YS Y++SFLGIEKLHPFD+SKW + FLS +G L + IVEP+EA+++DLLVVH+
Sbjct: 4 PVVYSSSYNVSFLGIEKLHPFDASKWSHVQNFLSDDGVLKQKRIVEPVEATRDDLLVVHT 63
Query: 96 ESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAIN 155
E YL SL SS V+ I EV PVA PN LVQ K+L+PFRKQVGGT+L+AKLAKERGWAIN
Sbjct: 64 EKYLDSLNSSYVVAQITEVAPVAFLPNFLVQWKLLHPFRKQVGGTVLSAKLAKERGWAIN 123
Query: 156 VGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSR 215
+GGGFHHC A+EGGGFCAYADI+L I +A+ +L ISRV+IIDLDAHQGNGHE+DF++D R
Sbjct: 124 IGGGFHHCCANEGGGFCAYADITLAIQFAYTRLAISRVIIIDLDAHQGNGHERDFTNDDR 183
Query: 216 VYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYN 275
VYI+DM+N IYP+D++AR+ I+Q V + SGT T+ YL L + L+ A F PELV+YN
Sbjct: 184 VYIIDMYNEDIYPQDFKARKRINQAVALKSGTKTDRYLALLSQELKKAATIFKPELVVYN 243
Query: 276 AGTDILEGDPLGMLKV 291
AGTD+LEGDPLG L V
Sbjct: 244 AGTDVLEGDPLGRLLV 259
>gi|302814820|ref|XP_002989093.1| hypothetical protein SELMODRAFT_129097 [Selaginella moellendorffii]
gi|300143194|gb|EFJ09887.1| hypothetical protein SELMODRAFT_129097 [Selaginella moellendorffii]
Length = 316
Score = 361 bits (927), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 166/258 (64%), Positives = 208/258 (80%), Gaps = 1/258 (0%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+P++YS Y+I+FLG+EKLHPFDSSKWGR+C+ L +G L+ I+EP EA+KEDLLVVH
Sbjct: 1 VPVVYSAVYNIAFLGLEKLHPFDSSKWGRVCELLIQKGELESRRIMEPGEATKEDLLVVH 60
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV-GGTILAAKLAKERGWA 153
+ YL+SL+ S + I+EVPPVAL P C+++ KVL PFRKQV GG++LA K+A ERGWA
Sbjct: 61 TPEYLESLKRSYVAASILEVPPVALLPYCIIRSKVLVPFRKQVVGGSVLAGKVAYERGWA 120
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSD 213
INVGGGFHHC GGGFC YADI+LCIH+AF LNISR MI+DLDAHQGNGHE+DF+ D
Sbjct: 121 INVGGGFHHCCGYRGGGFCVYADITLCIHFAFANLNISRAMIVDLDAHQGNGHERDFADD 180
Query: 214 SRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVI 273
RV+I DM+N IYP DYEA+R+ID++VE+ SGT T+ YL +L + LE A F P+L++
Sbjct: 181 DRVFIFDMYNRDIYPLDYEAKRWIDRRVEISSGTRTDSYLTRLKQELEEAFQAFAPDLLV 240
Query: 274 YNAGTDILEGDPLGMLKV 291
YNAGTDILEGDPLG L+V
Sbjct: 241 YNAGTDILEGDPLGRLEV 258
>gi|413954351|gb|AFW87000.1| hypothetical protein ZEAMMB73_180578 [Zea mays]
Length = 240
Score = 349 bits (895), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 161/216 (74%), Positives = 191/216 (88%)
Query: 13 AETLKRNRILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEG 72
E L++ RILSSKLY ++P K P++YSP YDISFLG+EKLHPF+S+KWGRIC++L+ EG
Sbjct: 14 GEALRQKRILSSKLYLEVPSSKAPVVYSPAYDISFLGLEKLHPFESAKWGRICRYLTREG 73
Query: 73 FLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYP 132
+LDK +VEPLEA KEDLLVVH+E+YL SL+ S VS I+EVPPV+L PN +V RK+L+P
Sbjct: 74 YLDKKQMVEPLEACKEDLLVVHTEAYLNSLKCSFRVSSIVEVPPVSLVPNWIVHRKLLHP 133
Query: 133 FRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISR 192
FRKQVGG+IL+AKLA ERGWAINVGGGFHHCSADEGGGFCAYADISLCI +AFV+LNIS
Sbjct: 134 FRKQVGGSILSAKLAFERGWAINVGGGFHHCSADEGGGFCAYADISLCIQFAFVRLNISS 193
Query: 193 VMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
V+IIDLDAHQGNGHEKDF++D RVYILDM+N GIYP
Sbjct: 194 VLIIDLDAHQGNGHEKDFANDGRVYILDMYNAGIYP 229
>gi|16226804|gb|AAL16266.1|AF428336_1 AT5g26040/T1N24_9 [Arabidopsis thaliana]
gi|25090256|gb|AAN72263.1| At5g26040/T1N24_9 [Arabidopsis thaliana]
Length = 261
Score = 339 bits (869), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 159/218 (72%), Positives = 184/218 (84%)
Query: 2 SSSSSPSVTTDAETLKRNRILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKW 61
S SS S+ T E L+R RIL+SKLYFD+P+ K+ +IYS YDISF+GIEKLHPFDSSKW
Sbjct: 41 SEISSFSMATHPEALRRERILNSKLYFDVPLSKVSIIYSSSYDISFMGIEKLHPFDSSKW 100
Query: 62 GRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFP 121
GR+C+FL S+GFL++ IVEPLEASK DLLVVHSE+YL SL+SS V+ I EV PVA FP
Sbjct: 101 GRVCKFLVSDGFLEEKAIVEPLEASKIDLLVVHSENYLNSLKSSATVARITEVAPVAFFP 160
Query: 122 NCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCI 181
N LVQ+KVLYPFRKQVGGTILAAKLA ERGWAIN+GGGFHHC+A+ GGGFCA+ADISLCI
Sbjct: 161 NFLVQQKVLYPFRKQVGGTILAAKLATERGWAINIGGGFHHCTAERGGGFCAFADISLCI 220
Query: 182 HYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYIL 219
H+AF++L ISRVMIIDLDAHQGNGHE D DS + L
Sbjct: 221 HFAFLRLRISRVMIIDLDAHQGNGHETDLGDDSMIKTL 258
>gi|260804797|ref|XP_002597274.1| hypothetical protein BRAFLDRAFT_203636 [Branchiostoma floridae]
gi|229282537|gb|EEN53286.1| hypothetical protein BRAFLDRAFT_203636 [Branchiostoma floridae]
Length = 339
Score = 334 bits (856), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 155/270 (57%), Positives = 206/270 (76%), Gaps = 1/270 (0%)
Query: 23 SSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEP 82
S++L+ DIP K P++YS DY+I FLG+EKLHPFDS KWG++ ++L G L + +V P
Sbjct: 3 STRLHEDIPQSKWPIVYSSDYNIGFLGLEKLHPFDSGKWGKVFRYLKESGLLKDDDVVTP 62
Query: 83 LEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTIL 142
+EA++EDLL+VHS YL SL+ S V+ I EVPPVAL PN +VQRK+L P R Q GGT++
Sbjct: 63 VEATEEDLLMVHSSGYLNSLKWSMVVAGITEVPPVALLPNFIVQRKLLKPLRLQTGGTVM 122
Query: 143 AAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAH 201
A KLA ERGWA+N+GGGFHHCSA+ GGGFCAYADI+L I + F ++ IS+ MI+DLDAH
Sbjct: 123 AGKLATERGWALNIGGGFHHCSAERGGGFCAYADITLSIKFLFERMEGISKAMIVDLDAH 182
Query: 202 QGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALE 261
QGNGHE+DF +DSRVYI+D++N IYP D A+ I +KVE+ + T + YL + + LE
Sbjct: 183 QGNGHERDFINDSRVYIMDVYNRYIYPHDSYAKGAIRRKVELQAYTEDDRYLSLVRKNLE 242
Query: 262 VAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
A F+P++++YNAGTD+LEGDPLG L +
Sbjct: 243 KALEEFNPDIIVYNAGTDVLEGDPLGALSI 272
>gi|291230574|ref|XP_002735241.1| PREDICTED: histone deacetylase 11-like [Saccoglossus kowalevskii]
Length = 376
Score = 333 bits (853), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 158/291 (54%), Positives = 209/291 (71%), Gaps = 1/291 (0%)
Query: 2 SSSSSPSVTTDAETLKRNRILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKW 61
+ SSS + +++ + + LY D+ + P++YS DY+I FLG+EKLHPFD+ KW
Sbjct: 3 AESSSNGDDEGKKRVQKKPLHKTDLYIDVSDRQWPIVYSQDYNIGFLGLEKLHPFDAGKW 62
Query: 62 GRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFP 121
G++ FL +G L + I+ P EA ++DL V+H++ YL SL+ S NV+ I EVPPVA P
Sbjct: 63 GKVYAFLKEDGMLRDDTIIAPREAGEKDLSVIHTKRYLDSLKWSVNVATITEVPPVAFLP 122
Query: 122 NCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCI 181
N +VQRKVL PFR Q GGTILAAKLA ERGWAIN+GGGFHHCS D GGGFCAYADISL I
Sbjct: 123 NFIVQRKVLKPFRIQTGGTILAAKLAIERGWAINIGGGFHHCSGDRGGGFCAYADISLAI 182
Query: 182 HYAFVQ-LNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQK 240
+ F + + MI+DLDAHQGNGHE+DF D RVY +D++N IYP D A+R I++K
Sbjct: 183 KFLFDRDPKTKKAMIVDLDAHQGNGHERDFMEDDRVYTMDVYNRHIYPHDGFAKRGINRK 242
Query: 241 VEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
VE++S T EYL+K+ LE++ F P++++YNAGTDIL+GDPLG L +
Sbjct: 243 VELMSWTEDAEYLEKVKMNLELSLGEFVPDIIVYNAGTDILDGDPLGALSI 293
>gi|348518091|ref|XP_003446565.1| PREDICTED: histone deacetylase 11-like [Oreochromis niloticus]
Length = 367
Score = 330 bits (847), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 156/276 (56%), Positives = 206/276 (74%), Gaps = 1/276 (0%)
Query: 17 KRNRILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDK 76
+++R + LY IP LP++Y PDY+I+F+G+EKLHPFD+ KWG++ +FL E F++
Sbjct: 9 EKSRCHRTDLYASIPRTCLPIVYHPDYNITFMGLEKLHPFDAGKWGKVIRFLKEEQFIND 68
Query: 77 NCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQ 136
+VE EA++EDLLVVH++ YL L+ S V+ I E+PP+ PN LVQRKVL P R Q
Sbjct: 69 GNLVEAREAAEEDLLVVHTKRYLNRLKWSLVVATITEIPPLLFLPNFLVQRKVLRPLRTQ 128
Query: 137 VGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMI 195
GGTI+A KLA ERGWAINVGGGFHHCS+D GGGFCAYADI+L I + F ++ ISRV I
Sbjct: 129 TGGTIMAGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRVTI 188
Query: 196 IDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKK 255
IDLDAHQGNGHE+DF D RV+I+DM+N IYP D A+R I +KVE+ GT +EYL+K
Sbjct: 189 IDLDAHQGNGHERDFLDDRRVFIMDMYNRYIYPGDEYAKRAIKRKVELDWGTEDSEYLQK 248
Query: 256 LDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
++ +E + P++++YNAGTDIL+GDPLG L +
Sbjct: 249 VELHMEGTLNEVLPDIIVYNAGTDILDGDPLGGLSI 284
>gi|449473359|ref|XP_002192262.2| PREDICTED: histone deacetylase 11 [Taeniopygia guttata]
Length = 371
Score = 328 bits (841), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 155/274 (56%), Positives = 202/274 (73%), Gaps = 1/274 (0%)
Query: 19 NRILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNC 78
+R ++LY D P+ P++YSPDY+I+F+G+EKLHPFD+ KWG++ FL E + +
Sbjct: 11 SRPHRTELYEDPPLGCWPIVYSPDYNITFMGLEKLHPFDAGKWGKVINFLKEEKLIADDL 70
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVG 138
IV+ EA+ EDLLVVH+ YL L+ S V+ I E+PPVA PN +VQRKVL P R Q G
Sbjct: 71 IVQAREATDEDLLVVHTRRYLNKLKWSFVVATITEIPPVAFLPNFIVQRKVLKPLRTQTG 130
Query: 139 GTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLN-ISRVMIID 197
GTI+A KLA +RGWAINVGGGFHHCS+D+GGGFCAYADI+L I + F ++ +SR IID
Sbjct: 131 GTIMAGKLAVDRGWAINVGGGFHHCSSDKGGGFCAYADITLAIKFLFERVQGVSRATIID 190
Query: 198 LDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLD 257
LDAHQGNGHE+DF D RVYI+D +N IYP D A+R I +KVE+ GT EYL+K+
Sbjct: 191 LDAHQGNGHERDFMDDPRVYIMDAYNRYIYPGDGFAKRAIKRKVELEWGTEDTEYLQKVH 250
Query: 258 EALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+E A + F P++V+YNAGTD+L+GDPLG L +
Sbjct: 251 THVEGALNEFKPDIVVYNAGTDVLDGDPLGGLAI 284
>gi|405959181|gb|EKC25242.1| Histone deacetylase 11 [Crassostrea gigas]
Length = 358
Score = 327 bits (839), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 160/279 (57%), Positives = 199/279 (71%), Gaps = 11/279 (3%)
Query: 24 SKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPL 83
+ LY +I + P+IYSP+Y+I FLG+EKLHPFD+ KWG++ FL G + + V
Sbjct: 15 TSLYQEIRPTQWPIIYSPEYNIGFLGLEKLHPFDAGKWGKVYGFLKDAGMIRDDTTVRAT 74
Query: 84 EASKEDLLVVHSESYLKSLQSSP----------NVSIIIEVPPVALFPNCLVQRKVLYPF 133
EA++ DLLVVH++ YL +L+ S NV+ I EVPPVAL PN +VQRKVL PF
Sbjct: 75 EATERDLLVVHTKGYLNNLKLSSIIEGVDEWSINVAQITEVPPVALLPNFIVQRKVLRPF 134
Query: 134 RKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLN-ISR 192
R GGTILA KLA+ERGWAIN+GGGFHHCSAD GGGFCAYADI+L IH+ F +L IS+
Sbjct: 135 RYHTGGTILAGKLAQERGWAINIGGGFHHCSADRGGGFCAYADITLSIHFMFDRLQGISK 194
Query: 193 VMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEY 252
V+IIDLDAHQGNGHE+DF D RVYI+D++N GIYP D A+R I++KVE+ T Y
Sbjct: 195 VLIIDLDAHQGNGHERDFMDDKRVYIMDVYNRGIYPHDGYAKRAINKKVELQHFTDDKVY 254
Query: 253 LKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
L +D A F P+ V+YNAGTDILEGDPLG L +
Sbjct: 255 LALVDRHTTEALDEFQPDAVVYNAGTDILEGDPLGNLSI 293
>gi|432859825|ref|XP_004069255.1| PREDICTED: histone deacetylase 11-like [Oryzias latipes]
Length = 664
Score = 327 bits (839), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 154/269 (57%), Positives = 201/269 (74%), Gaps = 1/269 (0%)
Query: 24 SKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPL 83
+ LY +P LP++Y PDY+I+F+G+EKLHPFD+ KWG++ FL E FL IVE
Sbjct: 313 TNLYTSLPQTCLPIVYHPDYNITFMGLEKLHPFDAGKWGKVIHFLKEECFLTDADIVEAR 372
Query: 84 EASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA 143
EA++EDLLVVH++ YLK L+ S V+ I E+PP+ PN LVQRKVL P R Q GGTI+A
Sbjct: 373 EATEEDLLVVHTKHYLKRLKWSVVVATITEIPPLLFLPNFLVQRKVLRPLRTQTGGTIMA 432
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLN-ISRVMIIDLDAHQ 202
KLA +RGWAINVGGGFHHCS+++GGGFCAYADI+L I + F ++ IS+ IIDLDAHQ
Sbjct: 433 GKLAVDRGWAINVGGGFHHCSSNKGGGFCAYADITLAIKFLFERVEGISKATIIDLDAHQ 492
Query: 203 GNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEV 262
GNGHE+DF D RVYI+D++N IYP D A+R I +KVE+ GT +EYL+K++ E
Sbjct: 493 GNGHERDFLEDRRVYIMDVYNSHIYPGDGHAKRAIRRKVELDWGTEDSEYLQKVELHCEG 552
Query: 263 AGHTFDPELVIYNAGTDILEGDPLGMLKV 291
A + P++++YNAGTDIL+GDPLG L +
Sbjct: 553 ALNELRPDIIVYNAGTDILDGDPLGGLSI 581
>gi|355559429|gb|EHH16157.1| hypothetical protein EGK_11401, partial [Macaca mulatta]
gi|355746507|gb|EHH51121.1| hypothetical protein EGM_10451, partial [Macaca fascicularis]
Length = 347
Score = 327 bits (838), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 155/273 (56%), Positives = 200/273 (73%), Gaps = 1/273 (0%)
Query: 20 RILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCI 79
R+ +++LY +P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L + +
Sbjct: 1 RLHTTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDSML 60
Query: 80 VEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGG 139
VE EAS+EDLLVVH+ YL L+ S V+ I E+PPV PN LVQRKVL P R Q GG
Sbjct: 61 VEAREASEEDLLVVHTRRYLNELKWSFAVATITEIPPVIFLPNFLVQRKVLRPLRTQTGG 120
Query: 140 TILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIIDL 198
TI+A KLA ERGWAINVGGGFHHCS+D GGGFCAYADI+L I + F ++ ISR IIDL
Sbjct: 121 TIMAGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDL 180
Query: 199 DAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDE 258
DAHQGNGHE+DF D RVYI+D++N IYP D A++ I +KVE+ GT +EYL K++
Sbjct: 181 DAHQGNGHERDFMDDKRVYIMDVYNRHIYPGDRFAKQAIRRKVELEWGTEDDEYLDKVER 240
Query: 259 ALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+E + P++V+YNAGTDILEGD LG L +
Sbjct: 241 NIEKSLQEHLPDVVVYNAGTDILEGDRLGGLSI 273
>gi|390337555|ref|XP_783282.2| PREDICTED: histone deacetylase 11-like [Strongylocentrotus
purpuratus]
Length = 491
Score = 326 bits (836), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 156/275 (56%), Positives = 198/275 (72%), Gaps = 1/275 (0%)
Query: 18 RNRILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKN 77
R RI SKLY ++ + P+IYSPDY+ISFLG EKLHPFDS KWG++ L EG
Sbjct: 106 RERIQKSKLYVNVEPHQWPIIYSPDYNISFLGFEKLHPFDSGKWGKVYNLLKKEGMFCDE 165
Query: 78 CIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV 137
V PLEA+++DLLV H++ Y+ L+ S +V+ I E+PPVAL PN +VQ+KVL P R Q
Sbjct: 166 TTVCPLEATEDDLLVAHTKQYISRLKWSISVAGITEIPPVALLPNYIVQKKVLRPLRLQT 225
Query: 138 GGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIID 197
GG+ILAAKLA ERGWAIN+GGGFHHCS+ +GGGFCAYADI+L + + F Q I + MI+D
Sbjct: 226 GGSILAAKLAMERGWAINIGGGFHHCSSKQGGGFCAYADITLALRFLFHQGTIKKAMILD 285
Query: 198 LDAHQGNGHEKDFSSDSR-VYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKL 256
LDAHQGNGHE+DF D VYILD++N IYPRD A+R I +KVEV +Y+ +
Sbjct: 286 LDAHQGNGHERDFMQDKESVYILDVYNRHIYPRDGFAKRGISRKVEVNYFIADEQYMTLV 345
Query: 257 DEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
LE A + F P++++YNAGTD LEGDPLG L +
Sbjct: 346 ASNLEAALNEFVPDILVYNAGTDSLEGDPLGALSI 380
>gi|390475353|ref|XP_002758694.2| PREDICTED: histone deacetylase 11 [Callithrix jacchus]
Length = 347
Score = 326 bits (836), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 155/270 (57%), Positives = 198/270 (73%), Gaps = 1/270 (0%)
Query: 23 SSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEP 82
+++LY +P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L + +VE
Sbjct: 4 TTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEA 63
Query: 83 LEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTIL 142
EAS+EDLLVVH+ YL L+ S V+ I E+PPV PN LVQRKVL P R Q GGTI+
Sbjct: 64 REASEEDLLVVHTRRYLNELKWSFAVATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIM 123
Query: 143 AAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAH 201
A KLA ERGWAINVGGGFHHCS+D GGGFCAYADI+L I + F ++ ISR IIDLDAH
Sbjct: 124 AGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAH 183
Query: 202 QGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALE 261
QGNGHE+DF D RVYI+D++N IYP D A++ I +KVE+ GT +EYL K++ +E
Sbjct: 184 QGNGHERDFMDDKRVYIMDVYNRHIYPGDRFAKQAIRRKVELEWGTEDDEYLVKVERNIE 243
Query: 262 VAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
A P++V+YNAGTDILEGD LG L +
Sbjct: 244 KALQEHLPDVVVYNAGTDILEGDRLGGLSI 273
>gi|395516785|ref|XP_003762566.1| PREDICTED: histone deacetylase 11 [Sarcophilus harrisii]
Length = 331
Score = 326 bits (836), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 156/269 (57%), Positives = 197/269 (73%), Gaps = 1/269 (0%)
Query: 24 SKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPL 83
+KLY ++ P+IYSP Y+I+F+G+EKLHPFD+ KWG++ FL E FL IVE
Sbjct: 5 TKLYQEVSKTCWPIIYSPRYNITFMGLEKLHPFDAGKWGKVVHFLKEENFLTDVMIVEAR 64
Query: 84 EASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA 143
EA++EDL VVH++ YL L+ S V+ I E+PPV PN LVQR VL P R Q GGTI+A
Sbjct: 65 EATEEDLRVVHTQRYLNKLKWSFVVATITEIPPVICLPNFLVQRHVLRPLRTQTGGTIMA 124
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAHQ 202
KLA ERGWAIN+GGGFHHCS+D GGGFCAYADISL I + F ++ +S+ IIDLDAHQ
Sbjct: 125 GKLAIERGWAINIGGGFHHCSSDRGGGFCAYADISLSIKFLFERVEGVSKATIIDLDAHQ 184
Query: 203 GNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEV 262
GNGHE+DF DSRVYI+D++N IYP D A+R I +K+E+ GT EYL+K+ + +E
Sbjct: 185 GNGHERDFMDDSRVYIMDIYNRNIYPGDSFAKRAIKRKIELEWGTGDREYLQKVTQHVEE 244
Query: 263 AGHTFDPELVIYNAGTDILEGDPLGMLKV 291
A P++VIYNAGTD+LEGDPLG L V
Sbjct: 245 ALKEHKPDVVIYNAGTDVLEGDPLGGLSV 273
>gi|431899765|gb|ELK07712.1| Histone deacetylase 11 [Pteropus alecto]
Length = 417
Score = 326 bits (835), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 156/274 (56%), Positives = 196/274 (71%), Gaps = 1/274 (0%)
Query: 19 NRILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNC 78
R ++ LY +P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L
Sbjct: 70 GRPHTTHLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVISFLKEEKLLSDGM 129
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVG 138
+VE EAS EDLLVVH+ YL L+ S V+ I E+PPV PN LVQRKVL P R Q G
Sbjct: 130 LVEAREASDEDLLVVHTRRYLNELKWSFAVATITEIPPVIFLPNFLVQRKVLKPLRTQTG 189
Query: 139 GTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIID 197
GTI+A KLA ERGWAINVGGGFHHCS+D GGGFCAYADI+L I + F ++ ISR I+D
Sbjct: 190 GTIMAGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIVD 249
Query: 198 LDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLD 257
LDAHQGNGHE+DF D RVYI+D++N IYP D A++ I +KVE+ GT +EYL K++
Sbjct: 250 LDAHQGNGHERDFMGDKRVYIMDVYNRHIYPGDRFAKQAIKRKVELEWGTEDDEYLDKVE 309
Query: 258 EALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
LE A P++V+YNAGTDILEGD LG L +
Sbjct: 310 RNLEKALQEHPPDVVVYNAGTDILEGDRLGGLSI 343
>gi|350591475|ref|XP_003483278.1| PREDICTED: histone deacetylase 11-like, partial [Sus scrofa]
Length = 276
Score = 326 bits (835), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 154/270 (57%), Positives = 196/270 (72%), Gaps = 1/270 (0%)
Query: 23 SSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEP 82
+++LY +P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L + +VE
Sbjct: 4 TTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVISFLKEEKLLTDSMLVEA 63
Query: 83 LEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTIL 142
EAS EDLLVVH+ YL L+ S V+ I E+PPV PN LVQRKVL P R Q GGTI+
Sbjct: 64 REASDEDLLVVHTRRYLNELKWSFAVATITEIPPVIFLPNFLVQRKVLKPLRTQTGGTIM 123
Query: 143 AAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLN-ISRVMIIDLDAH 201
A KLA ERGWAINVGGGFHHCS+D GGGFCAYADI+L I + F ++ ISR IIDLDAH
Sbjct: 124 AGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAH 183
Query: 202 QGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALE 261
QGNGHE+DF D RVYI+D++N IYP D A++ I +KVE+ T +EYL K++ LE
Sbjct: 184 QGNGHERDFMGDKRVYIMDVYNRHIYPGDRFAKQAIRRKVELEWATEDDEYLTKVERNLE 243
Query: 262 VAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
A P++V+YNAGTD+LEGD LG L +
Sbjct: 244 KALQEHRPDVVVYNAGTDVLEGDRLGGLSI 273
>gi|149728400|ref|XP_001489672.1| PREDICTED: histone deacetylase 11-like [Equus caballus]
Length = 347
Score = 325 bits (834), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 154/270 (57%), Positives = 198/270 (73%), Gaps = 1/270 (0%)
Query: 23 SSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEP 82
S++LY +P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L + +VE
Sbjct: 4 STQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVISFLKEENLLSDSMLVEA 63
Query: 83 LEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTIL 142
EAS EDLLVVH+ YL L+ S V+ I E+PPV PN LVQRKVL P R Q GGTI+
Sbjct: 64 REASDEDLLVVHTRRYLNELKWSFAVATITEIPPVIFLPNFLVQRKVLKPLRTQTGGTIM 123
Query: 143 AAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAH 201
A KLA ERGWAINVGGGFHHCS+D GGGFCAYADI+L I + F ++ ISR I+DLDAH
Sbjct: 124 AGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIVDLDAH 183
Query: 202 QGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALE 261
QGNGHE+DF +D RVYI+D++N IYP D A++ I +KVE+ GT +EYL K++ L+
Sbjct: 184 QGNGHERDFMNDKRVYIMDVYNRHIYPGDRFAKQAIRRKVELEWGTEDDEYLGKVERNLK 243
Query: 262 VAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
A P++V+YNAGTD+LEGD LG L +
Sbjct: 244 KALQEHPPDVVVYNAGTDVLEGDRLGGLSI 273
>gi|417399348|gb|JAA46694.1| Putative histone deacetylase [Desmodus rotundus]
Length = 347
Score = 325 bits (833), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 154/270 (57%), Positives = 196/270 (72%), Gaps = 1/270 (0%)
Query: 23 SSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEP 82
+S+LY +P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L +VE
Sbjct: 4 TSQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVISFLKEEKLLSDGMLVEA 63
Query: 83 LEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTIL 142
EAS EDLLVVH+ YL L+ S V+ I E+PP+ PN LVQRKVL P R Q GGTI+
Sbjct: 64 REASDEDLLVVHTRRYLNELKWSFAVATITEIPPLIFLPNFLVQRKVLKPLRTQTGGTIM 123
Query: 143 AAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAH 201
A KLA ERGWAINVGGGFHHCS+D GGGFCAYADI+L I + F ++ ISR I+DLDAH
Sbjct: 124 AGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLTIKFLFERVEGISRATIVDLDAH 183
Query: 202 QGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALE 261
QGNGHE+DF D RVYI+D++N IYP D A++ I +KVE+ GT +EYL K++ LE
Sbjct: 184 QGNGHERDFMGDKRVYIMDVYNRHIYPGDRFAKQAIRRKVELEWGTEDDEYLGKVERNLE 243
Query: 262 VAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
A P++V+YNAGTD+LEGD LG L +
Sbjct: 244 KALQEHPPDVVVYNAGTDVLEGDRLGGLSI 273
>gi|388454314|ref|NP_001252584.1| histone deacetylase 11 [Macaca mulatta]
gi|26394837|sp|Q9GKU5.2|HDA11_MACFA RecName: Full=Histone deacetylase 11; Short=HD11
gi|387542188|gb|AFJ71721.1| histone deacetylase 11 isoform 1 [Macaca mulatta]
Length = 347
Score = 325 bits (833), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 154/270 (57%), Positives = 198/270 (73%), Gaps = 1/270 (0%)
Query: 23 SSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEP 82
+++LY +P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L + +VE
Sbjct: 4 TTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEA 63
Query: 83 LEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTIL 142
EAS+EDLLVVH+ YL L+ S V+ I E+PPV PN LVQRKVL P R Q GGTI+
Sbjct: 64 REASEEDLLVVHTRRYLNELKWSFAVATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIM 123
Query: 143 AAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAH 201
A KLA ERGWAINVGGGFHHCS+D GGGFCAYADI+L I + F ++ ISR IIDLDAH
Sbjct: 124 AGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAH 183
Query: 202 QGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALE 261
QGNGHE+DF D RVYI+D++N IYP D A++ I +KVE+ GT +EYL K++ +E
Sbjct: 184 QGNGHERDFMDDKRVYIMDVYNRHIYPGDRFAKQAIRRKVELEWGTEDDEYLDKVERNIE 243
Query: 262 VAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ P++V+YNAGTDILEGD LG L +
Sbjct: 244 KSLQEHLPDVVVYNAGTDILEGDRLGGLSI 273
>gi|348556215|ref|XP_003463918.1| PREDICTED: histone deacetylase 11-like [Cavia porcellus]
Length = 488
Score = 325 bits (833), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 155/273 (56%), Positives = 196/273 (71%), Gaps = 1/273 (0%)
Query: 23 SSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEP 82
+++LY +P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L +VE
Sbjct: 145 ATQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVISFLKEEKLLSDGMLVEA 204
Query: 83 LEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTIL 142
EAS +DLLVVH+ YL L+ S V+ I E+PPV PN LVQRKVL P R Q GGTI+
Sbjct: 205 REASDDDLLVVHTRRYLNELKWSFVVATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIM 264
Query: 143 AAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAH 201
A KLA ERGWAINVGGGFHHCS+D GGGFCAYADI+L I + F ++ ISR IIDLDAH
Sbjct: 265 AGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERMEGISRATIIDLDAH 324
Query: 202 QGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALE 261
QGNGHE+DF D RVYI+D++N IYP D A++ I +KVE+ GT EYL K++ +E
Sbjct: 325 QGNGHERDFMGDKRVYIMDVYNRHIYPGDRFAKQAIRRKVELEWGTEDEEYLSKVERNVE 384
Query: 262 VAGHTFDPELVIYNAGTDILEGDPLGMLKVKWG 294
A P++V+YNAGTDILEGD LG L + G
Sbjct: 385 RALQEHLPDVVVYNAGTDILEGDRLGGLSISPG 417
>gi|326927845|ref|XP_003210099.1| PREDICTED: histone deacetylase 11-like [Meleagris gallopavo]
Length = 425
Score = 325 bits (832), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 153/276 (55%), Positives = 202/276 (73%), Gaps = 1/276 (0%)
Query: 17 KRNRILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDK 76
+R R ++LY +P P++YSPDY+I+F+G+EKLHPFD+ KWG++ FL E +
Sbjct: 67 QRKRPHRTELYEGVPSTCWPIVYSPDYNITFMGLEKLHPFDAGKWGKVINFLKEEKLIGD 126
Query: 77 NCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQ 136
+ IV+ EA+ EDLLVVH+ YL L+ S V+ I E+PPV PN LVQRKVL P R Q
Sbjct: 127 DLIVQAREATDEDLLVVHTRRYLNKLKWSFVVATITEIPPVLFLPNFLVQRKVLKPLRTQ 186
Query: 137 VGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMI 195
GGTI+A KLA +RGWAINVGGGFHHCS+D+GGGFCAYADI+L I + F ++ +S+ I
Sbjct: 187 TGGTIMAGKLAVDRGWAINVGGGFHHCSSDKGGGFCAYADITLAIKFLFERVPGVSKATI 246
Query: 196 IDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKK 255
IDLDAHQGNGHE+DF +D RVYI+D++N IYP D A+R I +KVE+ GT EYL+K
Sbjct: 247 IDLDAHQGNGHERDFMNDHRVYIMDVYNRYIYPGDGFAKRAIKRKVELEWGTEDTEYLQK 306
Query: 256 LDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ +E A + P++++YNAGTDIL+GDPLG L +
Sbjct: 307 VHTHVEGALNELKPDIIVYNAGTDILDGDPLGGLAI 342
>gi|449266313|gb|EMC77377.1| Histone deacetylase 11, partial [Columba livia]
Length = 334
Score = 324 bits (830), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 153/269 (56%), Positives = 198/269 (73%), Gaps = 1/269 (0%)
Query: 24 SKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPL 83
+ LY D P P++YSPDY+I+F+G+EKLHPFD+ KWG++ FL E + + IV+
Sbjct: 3 TALYEDPPAACWPIVYSPDYNITFVGLEKLHPFDAGKWGKVINFLKEEKLIADDLIVQAR 62
Query: 84 EASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA 143
EA+ EDLLVVH+ YL L+ S V+ I E+PPVA PN +VQRKVL P R Q GGTI+A
Sbjct: 63 EATDEDLLVVHTRRYLNKLKWSFVVATITEIPPVAFLPNFVVQRKVLRPLRTQTGGTIMA 122
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLN-ISRVMIIDLDAHQ 202
KLA +RGWAINVGGGFHHCS+D+GGGFCAYADI+L I + F ++ +S+ IIDLDAHQ
Sbjct: 123 GKLAVDRGWAINVGGGFHHCSSDKGGGFCAYADITLAIKFLFERVQGVSKATIIDLDAHQ 182
Query: 203 GNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEV 262
GNGHE+DF D RVYI+D++N IYP D A+R I +KVE+ GT EYL+K+ +E
Sbjct: 183 GNGHERDFMDDHRVYIMDVYNRYIYPGDGFAKRAIKRKVELEWGTEDTEYLQKVHTHVEG 242
Query: 263 AGHTFDPELVIYNAGTDILEGDPLGMLKV 291
A + P++++YNAGTDIL+GDPLG L V
Sbjct: 243 ALNELKPDIIVYNAGTDILDGDPLGGLAV 271
>gi|426339523|ref|XP_004033698.1| PREDICTED: histone deacetylase 11 isoform 1 [Gorilla gorilla
gorilla]
Length = 347
Score = 324 bits (830), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 153/270 (56%), Positives = 198/270 (73%), Gaps = 1/270 (0%)
Query: 23 SSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEP 82
+++LY +P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L + +VE
Sbjct: 4 TTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEA 63
Query: 83 LEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTIL 142
EAS+EDLLVVH+ YL L+ S V+ I E+PPV PN LVQRKVL P R Q GGTI+
Sbjct: 64 REASEEDLLVVHTRRYLNELKWSFAVATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIM 123
Query: 143 AAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAH 201
A KLA ERGWAINVGGGFHHCS+D GGGFCAYADI+L I + F ++ ISR IIDLDAH
Sbjct: 124 AGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAH 183
Query: 202 QGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALE 261
QGNGHE+DF D RVYI+D++N IYP D A++ I +KVE+ GT +EYL K++ ++
Sbjct: 184 QGNGHERDFMDDKRVYIMDVYNRHIYPGDRFAKQAIRRKVELEWGTEDDEYLDKVERNIK 243
Query: 262 VAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ P++V+YNAGTDILEGD LG L +
Sbjct: 244 KSLQEHLPDVVVYNAGTDILEGDRLGGLSI 273
>gi|402859321|ref|XP_003894111.1| PREDICTED: histone deacetylase 11 isoform 1 [Papio anubis]
Length = 347
Score = 324 bits (830), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 154/270 (57%), Positives = 197/270 (72%), Gaps = 1/270 (0%)
Query: 23 SSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEP 82
+++LY +P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L + +VE
Sbjct: 4 TTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEA 63
Query: 83 LEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTIL 142
EAS+EDLLVVH+ YL L+ S V+ I E+PPV PN LVQRKVL P R Q GGTI+
Sbjct: 64 REASEEDLLVVHTRRYLNELKWSFAVATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIM 123
Query: 143 AAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAH 201
A KLA ERGWAINVGGGFHHCS+D GGGFCAYADI+L I + F ++ ISR IIDLDAH
Sbjct: 124 AGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAH 183
Query: 202 QGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALE 261
QGNGHE+DF D RVYI+D++N IYP D A++ I +KVE+ GT +EYL K+ +E
Sbjct: 184 QGNGHERDFMDDKRVYIMDVYNRHIYPGDRFAKQAIRRKVELEWGTEDDEYLDKVGRNIE 243
Query: 262 VAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ P++V+YNAGTDILEGD LG L +
Sbjct: 244 KSLQEHLPDVVVYNAGTDILEGDRLGGLSI 273
>gi|301770641|ref|XP_002920740.1| PREDICTED: histone deacetylase 11-like [Ailuropoda melanoleuca]
Length = 411
Score = 324 bits (830), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 154/274 (56%), Positives = 198/274 (72%), Gaps = 1/274 (0%)
Query: 19 NRILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNC 78
+R +++LY +P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L
Sbjct: 64 SRPHTTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVISFLKEEKLLSDGM 123
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVG 138
+VE EAS EDLLVVH+ YL L+ S V+ I E+PPV PN LVQRKVL P R Q G
Sbjct: 124 LVEAREASDEDLLVVHTRRYLNELKWSFAVATITEIPPVIFLPNFLVQRKVLKPLRTQTG 183
Query: 139 GTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIID 197
GTI+A KLA ERGWAINVGGGFHHCS+D GGGFCAYADI+L I + F ++ ISR I+D
Sbjct: 184 GTIMAGKLAMERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIVD 243
Query: 198 LDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLD 257
LDAHQGNGHE+DF D RVYI+D++N IYP D A++ I +KVE+ GT +EYL K++
Sbjct: 244 LDAHQGNGHERDFMGDKRVYIMDVYNRHIYPGDRFAKQAIRRKVELEWGTEDDEYLDKVE 303
Query: 258 EALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
L+ A P++++YNAGTDILEGD LG L +
Sbjct: 304 RNLQKALQEHLPDVLVYNAGTDILEGDRLGGLSI 337
>gi|297669993|ref|XP_002813164.1| PREDICTED: histone deacetylase 11 isoform 1 [Pongo abelii]
Length = 347
Score = 324 bits (830), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 153/270 (56%), Positives = 198/270 (73%), Gaps = 1/270 (0%)
Query: 23 SSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEP 82
+++LY +P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L + +VE
Sbjct: 4 TTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEA 63
Query: 83 LEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTIL 142
EAS+EDLLVVH+ YL L+ S V+ I E+PPV PN LVQRKVL P R Q GGTI+
Sbjct: 64 REASEEDLLVVHTRRYLNELKWSFAVATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIM 123
Query: 143 AAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAH 201
A KLA ERGWAINVGGGFHHCS+D GGGFCAYADI+L I + F ++ ISR IIDLDAH
Sbjct: 124 AGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIQFLFERVEGISRATIIDLDAH 183
Query: 202 QGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALE 261
QGNGHE+DF D RVYI+D++N IYP D A++ I +KVE+ GT +EYL K++ ++
Sbjct: 184 QGNGHERDFMDDKRVYIMDVYNRHIYPGDRFAKQAIRRKVELEWGTEDDEYLDKVERNIK 243
Query: 262 VAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ P++V+YNAGTDILEGD LG L +
Sbjct: 244 KSLQEHLPDVVVYNAGTDILEGDRLGGLSI 273
>gi|217272877|ref|NP_079103.2| histone deacetylase 11 isoform 1 [Homo sapiens]
gi|26394832|sp|Q96DB2.1|HDA11_HUMAN RecName: Full=Histone deacetylase 11; Short=HD11
gi|16307174|gb|AAH09676.1| Histone deacetylase 11 [Homo sapiens]
gi|117644908|emb|CAL37920.1| hypothetical protein [synthetic construct]
gi|117646466|emb|CAL38700.1| hypothetical protein [synthetic construct]
gi|119584569|gb|EAW64165.1| histone deacetylase 11, isoform CRA_i [Homo sapiens]
gi|119584572|gb|EAW64168.1| histone deacetylase 11, isoform CRA_i [Homo sapiens]
gi|208966472|dbj|BAG73250.1| histone deacetylase 11 [synthetic construct]
gi|410220854|gb|JAA07646.1| histone deacetylase 11 [Pan troglodytes]
gi|410262586|gb|JAA19259.1| histone deacetylase 11 [Pan troglodytes]
gi|410287274|gb|JAA22237.1| histone deacetylase 11 [Pan troglodytes]
gi|410336795|gb|JAA37344.1| histone deacetylase 11 [Pan troglodytes]
Length = 347
Score = 323 bits (829), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 153/270 (56%), Positives = 198/270 (73%), Gaps = 1/270 (0%)
Query: 23 SSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEP 82
+++LY +P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L + +VE
Sbjct: 4 TTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEA 63
Query: 83 LEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTIL 142
EAS+EDLLVVH+ YL L+ S V+ I E+PPV PN LVQRKVL P R Q GGTI+
Sbjct: 64 REASEEDLLVVHTRRYLNELKWSFAVATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIM 123
Query: 143 AAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAH 201
A KLA ERGWAINVGGGFHHCS+D GGGFCAYADI+L I + F ++ ISR IIDLDAH
Sbjct: 124 AGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAH 183
Query: 202 QGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALE 261
QGNGHE+DF D RVYI+D++N IYP D A++ I +KVE+ GT +EYL K++ ++
Sbjct: 184 QGNGHERDFMDDKRVYIMDVYNRHIYPGDRFAKQAIRRKVELEWGTEDDEYLDKVERNIK 243
Query: 262 VAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ P++V+YNAGTDILEGD LG L +
Sbjct: 244 KSLQEHLPDVVVYNAGTDILEGDRLGGLSI 273
>gi|432097765|gb|ELK27813.1| Histone deacetylase 11 [Myotis davidii]
Length = 360
Score = 323 bits (827), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 153/270 (56%), Positives = 197/270 (72%), Gaps = 1/270 (0%)
Query: 23 SSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEP 82
+++LY +P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L +VE
Sbjct: 21 TTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVISFLKEEKLLSDGMLVEA 80
Query: 83 LEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTIL 142
EAS+EDLLVVH+ YL L+ S V+ I E+PPV PN LVQRKVL P R Q GGTI+
Sbjct: 81 REASEEDLLVVHTRRYLNELKWSFAVATITEIPPVIFLPNFLVQRKVLKPLRIQTGGTIM 140
Query: 143 AAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAH 201
A KLA ERGWAINVGGGFHHCS+D GGGFCAYADI+L I + F ++ ISR I+DLDAH
Sbjct: 141 AGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIVDLDAH 200
Query: 202 QGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALE 261
QGNGHE+DF D RVYI+D++N IYP D A++ I +KVE+ GT +EYL K++ L+
Sbjct: 201 QGNGHERDFMGDQRVYIMDVYNRHIYPGDRFAKQAIRRKVELEWGTEDDEYLDKVERNLK 260
Query: 262 VAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
A P++++YNAGTDILEGD LG L +
Sbjct: 261 RALQEHPPDIMVYNAGTDILEGDRLGGLSI 290
>gi|50344998|ref|NP_001002171.1| histone deacetylase 11 [Danio rerio]
gi|49256677|gb|AAH74052.1| Zgc:91942 [Danio rerio]
gi|182892122|gb|AAI65866.1| Zgc:91942 protein [Danio rerio]
Length = 366
Score = 322 bits (825), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 152/269 (56%), Positives = 200/269 (74%), Gaps = 1/269 (0%)
Query: 24 SKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPL 83
++LY ++P LP++YSP+Y+I+F+G+EKLHPFD+ KWG++ +FL E F+ IV
Sbjct: 16 TELYAEVPASCLPIVYSPEYNITFMGLEKLHPFDAGKWGKVIRFLKEEQFITDEIIVLAR 75
Query: 84 EASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA 143
EAS+ DLLVVH+ YL L+ S V+ I E+PP+ PN LVQRKVL P R Q GGTI+A
Sbjct: 76 EASEADLLVVHTARYLNRLKWSLVVATITEIPPLLFLPNFLVQRKVLRPLRTQTGGTIMA 135
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAHQ 202
KLA +RGWAINVGGGFHHCS+D+GGGFCAYADI+L I + F ++ ++ IIDLDAHQ
Sbjct: 136 GKLAIDRGWAINVGGGFHHCSSDKGGGFCAYADITLAIKFLFERVEGVASATIIDLDAHQ 195
Query: 203 GNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEV 262
GNGHE+DF D RVYI+D++N IYP D A+R I +KVE+ GT +EYL+K+D E
Sbjct: 196 GNGHERDFLEDRRVYIMDVYNRHIYPGDGYAKRAIKRKVELDWGTEDSEYLQKVDLHSEG 255
Query: 263 AGHTFDPELVIYNAGTDILEGDPLGMLKV 291
A + P+++IYNAGTDIL+GDPLG L +
Sbjct: 256 ALNEARPDIIIYNAGTDILDGDPLGGLAI 284
>gi|281344338|gb|EFB19922.1| hypothetical protein PANDA_009507 [Ailuropoda melanoleuca]
Length = 345
Score = 322 bits (825), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 152/270 (56%), Positives = 195/270 (72%), Gaps = 1/270 (0%)
Query: 23 SSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEP 82
+++LY +P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L +VE
Sbjct: 2 TTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVISFLKEEKLLSDGMLVEA 61
Query: 83 LEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTIL 142
EAS EDLLVVH+ YL L+ S V+ I E+PPV PN LVQRKVL P R Q GGTI+
Sbjct: 62 REASDEDLLVVHTRRYLNELKWSFAVATITEIPPVIFLPNFLVQRKVLKPLRTQTGGTIM 121
Query: 143 AAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAH 201
KLA ERGWAINVGGGFHHCS+D GGGFCAYADI+L I + F ++ ISR I+DLDAH
Sbjct: 122 VRKLAMERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIVDLDAH 181
Query: 202 QGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALE 261
QGNGHE+DF D RVYI+D++N IYP D A++ I +KVE+ GT +EYL K++ L+
Sbjct: 182 QGNGHERDFMGDKRVYIMDVYNRHIYPGDRFAKQAIRRKVELEWGTEDDEYLDKVERNLQ 241
Query: 262 VAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
A P++++YNAGTDILEGD LG L +
Sbjct: 242 KALQEHLPDVLVYNAGTDILEGDRLGGLSI 271
>gi|10438544|dbj|BAB15272.1| unnamed protein product [Homo sapiens]
Length = 347
Score = 322 bits (825), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 153/270 (56%), Positives = 197/270 (72%), Gaps = 1/270 (0%)
Query: 23 SSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEP 82
+++LY +P P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L + +VE
Sbjct: 4 TTQLYQHVPETPWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEA 63
Query: 83 LEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTIL 142
EAS+EDLLVVH+ YL L+ S V+ I E+PPV PN LVQRKVL P R Q GGTI+
Sbjct: 64 REASEEDLLVVHTRRYLNELKWSFAVATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIM 123
Query: 143 AAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAH 201
A KLA ERGWAINVGGGFHHCS+D GGGFCAYADI+L I + F ++ ISR IIDLDAH
Sbjct: 124 AGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAH 183
Query: 202 QGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALE 261
QGNGHE+DF D RVYI+D++N IYP D A++ I +KVE+ GT +EYL K++ ++
Sbjct: 184 QGNGHERDFMDDKRVYIMDVYNRHIYPGDRFAKQAIRRKVELEWGTEDDEYLDKVERNIK 243
Query: 262 VAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ P++V+YNAGTDILEGD LG L +
Sbjct: 244 KSLQEHLPDVVVYNAGTDILEGDRLGGLSI 273
>gi|440903563|gb|ELR54202.1| Histone deacetylase 11, partial [Bos grunniens mutus]
Length = 386
Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 153/269 (56%), Positives = 196/269 (72%), Gaps = 1/269 (0%)
Query: 24 SKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPL 83
++LY +P + P++YSP Y+I+FLG+EKLHPFD+ KWG++ L E L + +VE
Sbjct: 4 TQLYQHVPDSRWPIVYSPRYNITFLGLEKLHPFDAGKWGKVISLLKEEKLLSDSMLVEAR 63
Query: 84 EASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA 143
EAS EDLLVVH+ YL L+ S V+ I E+PPV PN LVQRKVL P R Q GGTI+A
Sbjct: 64 EASDEDLLVVHTRRYLNELKWSFAVATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIMA 123
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAHQ 202
KLA +RGWAINVGGGFHHCS+D GGGFCAYADI+L I + F ++ IS+ I+DLDAHQ
Sbjct: 124 GKLAVDRGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFDRVEGISKATIVDLDAHQ 183
Query: 203 GNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEV 262
GNGHE+DF D RVYI+D++N IYP D A++ I +KVE+ GT +EYL+K++ LE
Sbjct: 184 GNGHERDFMGDRRVYIMDVYNRHIYPGDRFAKQAIRRKVELEWGTEDDEYLQKVERNLEK 243
Query: 263 AGHTFDPELVIYNAGTDILEGDPLGMLKV 291
A P++V+YNAGTDILEGD LG L +
Sbjct: 244 ALQEHRPDIVVYNAGTDILEGDRLGGLAI 272
>gi|156120759|ref|NP_001095526.1| histone deacetylase 11 [Bos taurus]
gi|154757388|gb|AAI51742.1| HDAC11 protein [Bos taurus]
gi|296474662|tpg|DAA16777.1| TPA: histone deacetylase 11 [Bos taurus]
Length = 386
Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 153/269 (56%), Positives = 196/269 (72%), Gaps = 1/269 (0%)
Query: 24 SKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPL 83
++LY +P + P++YSP Y+I+FLG+EKLHPFD+ KWG++ L E L + +VE
Sbjct: 5 TQLYQHVPDSRWPIVYSPRYNITFLGLEKLHPFDAGKWGKVISLLKEEKLLSDSMLVEAR 64
Query: 84 EASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA 143
EAS EDLLVVH+ YL L+ S V+ I E+PPV PN LVQRKVL P R Q GGTI+A
Sbjct: 65 EASDEDLLVVHTRRYLNELKWSFAVATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIMA 124
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAHQ 202
KLA +RGWAINVGGGFHHCS+D GGGFCAYADI+L I + F ++ IS+ I+DLDAHQ
Sbjct: 125 GKLAVDRGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFDRVEGISKATIVDLDAHQ 184
Query: 203 GNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEV 262
GNGHE+DF D RVYI+D++N IYP D A++ I +KVE+ GT +EYL+K++ LE
Sbjct: 185 GNGHERDFMGDKRVYIMDVYNRHIYPGDRFAKQAIRRKVELEWGTEDDEYLQKVERNLEK 244
Query: 263 AGHTFDPELVIYNAGTDILEGDPLGMLKV 291
A P++V+YNAGTDILEGD LG L +
Sbjct: 245 ALQEHRPDIVVYNAGTDILEGDRLGGLAI 273
>gi|118096828|ref|XP_414321.2| PREDICTED: histone deacetylase 11 [Gallus gallus]
Length = 358
Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 151/269 (56%), Positives = 198/269 (73%), Gaps = 1/269 (0%)
Query: 24 SKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPL 83
++LY +P P++YSPDY+I+F+G+EKLHPFD+ KWG++ FL E + + IV+
Sbjct: 5 TELYEGVPPTCWPIVYSPDYNITFMGLEKLHPFDAGKWGKVINFLKEEKLIGDDLIVQAR 64
Query: 84 EASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA 143
EA+ EDLLVVH+ YL L+ S V+ I E+PPV PN LVQRKVL P R Q GGTI+A
Sbjct: 65 EATDEDLLVVHTRRYLNKLKWSFVVATITEIPPVLFLPNFLVQRKVLKPLRTQTGGTIMA 124
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAHQ 202
KLA +RGWAINVGGGFHHCS+D+GGGFCAYADI+L I + F ++ +S+ IIDLDAHQ
Sbjct: 125 GKLAVDRGWAINVGGGFHHCSSDKGGGFCAYADITLAIKFLFERVPGVSKATIIDLDAHQ 184
Query: 203 GNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEV 262
GNGHE+DF +D RVYI+D +N IYP D A+R I +KVE+ GT EYL+K+ +E
Sbjct: 185 GNGHERDFMNDHRVYIMDAYNRYIYPGDGFAKRAIKRKVELEWGTEDTEYLQKVHTHVEG 244
Query: 263 AGHTFDPELVIYNAGTDILEGDPLGMLKV 291
A + P++++YNAGTDIL+GDPLG L +
Sbjct: 245 ALNELKPDIIVYNAGTDILDGDPLGGLAI 273
>gi|348605146|ref|NP_001100080.2| histone deacetylase 11 [Rattus norvegicus]
gi|149036741|gb|EDL91359.1| histone deacetylase 11 (predicted), isoform CRA_a [Rattus
norvegicus]
gi|183985828|gb|AAI66430.1| Hdac11 protein [Rattus norvegicus]
Length = 347
Score = 321 bits (822), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 152/270 (56%), Positives = 195/270 (72%), Gaps = 1/270 (0%)
Query: 23 SSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEP 82
+++LY +P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L +VE
Sbjct: 4 ATQLYQHVPEKRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDGMLVEA 63
Query: 83 LEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTIL 142
EAS+EDLLVVH+ YL L+ S V+ I E+PPV PN LVQRKVL P R Q GGTI+
Sbjct: 64 REASEEDLLVVHTRRYLNELKWSFVVATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIM 123
Query: 143 AAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAH 201
A KLA ERGWAINVGGGFHHCS+D GGGFCAYADI+L I + F ++ ISR IIDLDAH
Sbjct: 124 AGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAH 183
Query: 202 QGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALE 261
QGNGHE+DF D RVYI+D++N IYP D A+ I +KVE+ GT EYL+K++ +
Sbjct: 184 QGNGHERDFMGDKRVYIMDVYNRHIYPGDRFAKEAIRRKVELEWGTEDEEYLEKVERNVR 243
Query: 262 VAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ P++V+YNAGTD+LEGD LG L +
Sbjct: 244 RSLQEHLPDVVVYNAGTDVLEGDRLGGLSI 273
>gi|380798593|gb|AFE71172.1| histone deacetylase 11 isoform 1, partial [Macaca mulatta]
Length = 338
Score = 320 bits (821), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 152/263 (57%), Positives = 193/263 (73%), Gaps = 1/263 (0%)
Query: 30 IPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKED 89
+P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L + +VE EAS+ED
Sbjct: 2 VPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEAREASEED 61
Query: 90 LLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
LLVVH+ YL L+ S V+ I E+PPV PN LVQRKVL P R Q GGTI+A KLA E
Sbjct: 62 LLVVHTRRYLNELKWSFAVATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIMAGKLAVE 121
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAHQGNGHEK 208
RGWAINVGGGFHHCS+D GGGFCAYADI+L I + F ++ ISR IIDLDAHQGNGHE+
Sbjct: 122 RGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHER 181
Query: 209 DFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFD 268
DF D RVYI+D++N IYP D A++ I +KVE+ GT +EYL K++ +E +
Sbjct: 182 DFMDDKRVYIMDVYNRHIYPGDRFAKQAIRRKVELEWGTEDDEYLDKVERNIEKSLQEHL 241
Query: 269 PELVIYNAGTDILEGDPLGMLKV 291
P++V+YNAGTDILEGD LG L +
Sbjct: 242 PDVVVYNAGTDILEGDRLGGLSI 264
>gi|21450317|ref|NP_659168.1| histone deacetylase 11 [Mus musculus]
gi|26394805|sp|Q91WA3.1|HDA11_MOUSE RecName: Full=Histone deacetylase 11; Short=HD11
gi|16740659|gb|AAH16208.1| Histone deacetylase 11 [Mus musculus]
gi|26337759|dbj|BAC32565.1| unnamed protein product [Mus musculus]
gi|148666877|gb|EDK99293.1| histone deacetylase 11 [Mus musculus]
Length = 347
Score = 320 bits (820), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 152/270 (56%), Positives = 195/270 (72%), Gaps = 1/270 (0%)
Query: 23 SSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEP 82
+++LY +P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L +VE
Sbjct: 4 ATQLYQHVPEKRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDGMLVEA 63
Query: 83 LEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTIL 142
EAS+EDLLVVH+ YL L+ S V+ I E+PPV PN LVQRKVL P R Q GGTI+
Sbjct: 64 REASEEDLLVVHTRRYLNELKWSFVVATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIM 123
Query: 143 AAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAH 201
A KLA ERGWAINVGGGFHHCS+D GGGFCAYADI+L I + F ++ ISR IIDLDAH
Sbjct: 124 AGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAH 183
Query: 202 QGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALE 261
QGNGHE+DF D RVYI+D++N IYP D A+ I +KVE+ GT EYL+K++ +
Sbjct: 184 QGNGHERDFMGDKRVYIMDVYNRHIYPGDRFAKEAIRRKVELEWGTEDEEYLEKVERNVR 243
Query: 262 VAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ P++V+YNAGTD+LEGD LG L +
Sbjct: 244 RSLQEHLPDVVVYNAGTDVLEGDRLGGLSI 273
>gi|395847170|ref|XP_003796256.1| PREDICTED: histone deacetylase 11 [Otolemur garnettii]
Length = 347
Score = 318 bits (815), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 155/272 (56%), Positives = 194/272 (71%), Gaps = 1/272 (0%)
Query: 24 SKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPL 83
++LY +P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L +VE
Sbjct: 5 TQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDCMLVEAK 64
Query: 84 EASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA 143
EAS+EDLLVVH+ YL L+ S V+ I E+PPV PN LVQRKVL P R Q GGTI+A
Sbjct: 65 EASEEDLLVVHTRRYLNELKWSFVVATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIMA 124
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAHQ 202
KLA ERGWAINVGGGFHHCS+D GGGFCAYADISL I + F ++ ISR IIDLDAHQ
Sbjct: 125 GKLAVERGWAINVGGGFHHCSSDRGGGFCAYADISLAIKFLFDRVEGISRATIIDLDAHQ 184
Query: 203 GNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEV 262
GNGHE+DF D RVYI+D++N IYP D A++ I +KVE+ G EYL K++ +
Sbjct: 185 GNGHERDFMDDQRVYIMDVYNRHIYPGDRFAKQAIRRKVELDWGVEDAEYLNKVETNIRK 244
Query: 263 AGHTFDPELVIYNAGTDILEGDPLGMLKVKWG 294
A P++V+YNAGTDILEGD LG L + G
Sbjct: 245 ALMEHLPDVVVYNAGTDILEGDRLGGLSISPG 276
>gi|443694557|gb|ELT95657.1| hypothetical protein CAPTEDRAFT_197333 [Capitella teleta]
Length = 377
Score = 317 bits (813), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 159/301 (52%), Positives = 206/301 (68%), Gaps = 33/301 (10%)
Query: 24 SKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPL 83
++LYFDI + P++YSP+Y+I+FLG+EKLHPFDS KWGR+ +FL + IV+P
Sbjct: 16 TELYFDIQETQWPIVYSPEYNIAFLGLEKLHPFDSGKWGRVYEFLKEAKMIYDYTIVKPK 75
Query: 84 EASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTIL- 142
EA DLLVVHS Y+ +L+ S NV+ I EVPPVAL PN +VQ+KVL PFR Q GGTIL
Sbjct: 76 EAQTIDLLVVHSMRYISTLRWSMNVASITEVPPVALVPNFIVQKKVLRPFRYQTGGTILI 135
Query: 143 -------------------------------AAKLAKERGWAINVGGGFHHCSADEGGGF 171
AAKLA ERGW+IN+GGGFHHC A++GGGF
Sbjct: 136 PDPTCSIVKYVIGFFVYTLVSMEIDQEVELTAAKLAVERGWSINIGGGFHHCCAEKGGGF 195
Query: 172 CAYADISLCIHYAFVQLN-ISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRD 230
CAYADI+L I + + + IS+VMI+DLDAHQGNGH +DF + VYILD++N IYPRD
Sbjct: 196 CAYADITLAIRFLLQRTSTISKVMIVDLDAHQGNGHARDFMDEDGVYILDIYNRQIYPRD 255
Query: 231 YEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLK 290
A+R I +KVE+ + T EYL+K+ +E A + F+P+LV+YNAGTD+LEGDPLG+L
Sbjct: 256 GFAKRGIRRKVELEAFTEDEEYLRKVRNNVEGALNEFEPDLVVYNAGTDVLEGDPLGLLS 315
Query: 291 V 291
+
Sbjct: 316 I 316
>gi|397511877|ref|XP_003826289.1| PREDICTED: histone deacetylase 11 isoform 1 [Pan paniscus]
Length = 348
Score = 317 bits (812), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 153/271 (56%), Positives = 197/271 (72%), Gaps = 2/271 (0%)
Query: 23 SSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEP 82
+++LY +P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L + +VE
Sbjct: 4 TTQLYQHVPEARWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEA 63
Query: 83 LEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGT-I 141
EAS+EDLLVVH+ YL L+ S V+ I E+PPV PN LVQRKVL P R Q GGT
Sbjct: 64 REASEEDLLVVHTRRYLNELKWSFAVATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTHK 123
Query: 142 LAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIIDLDA 200
LA KLA ERGWAINVGGGFHHCS+D GGGFCAYADI+L I + F ++ ISR IIDLDA
Sbjct: 124 LAGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDA 183
Query: 201 HQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEAL 260
HQGNGHE+DF D RVYI+D++N IYP D A++ I +KVE+ GT +EYL K++ +
Sbjct: 184 HQGNGHERDFMDDKRVYIMDVYNRHIYPGDRFAKQAIRRKVELEWGTEDDEYLDKVERNI 243
Query: 261 EVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ + P++V+YNAGTDILEGD LG L +
Sbjct: 244 KKSLQEHLPDVVVYNAGTDILEGDRLGGLSI 274
>gi|196005073|ref|XP_002112403.1| hypothetical protein TRIADDRAFT_25844 [Trichoplax adhaerens]
gi|190584444|gb|EDV24513.1| hypothetical protein TRIADDRAFT_25844, partial [Trichoplax
adhaerens]
Length = 374
Score = 311 bits (797), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 149/267 (55%), Positives = 194/267 (72%), Gaps = 1/267 (0%)
Query: 24 SKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPL 83
+ LY DI + P++YS YDISF G+EKLHPFDS KWG++ L S + + IV P
Sbjct: 1 TNLYIDIRDNQWPIVYSDRYDISFFGVEKLHPFDSCKWGKVMAILKSMKLIGDDDIVIPN 60
Query: 84 EASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA 143
EA++ DLLVVH SYLKSL+ S V+ IIEVP VAL PN +VQ+++L FR Q GGT+LA
Sbjct: 61 EATENDLLVVHPSSYLKSLKWSITVANIIEVPFVALLPNFVVQKRILKAFRYQTGGTVLA 120
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLN-ISRVMIIDLDAHQ 202
KLA ERGWAIN+GGGFHHCS+D GGGFCAYADI++C+ F ++ + + +IIDLDAHQ
Sbjct: 121 GKLALERGWAINIGGGFHHCSSDNGGGFCAYADITICLKMLFQHVDGVRKAVIIDLDAHQ 180
Query: 203 GNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEV 262
GNGHE+DF+ +S VYILD++N IYPRD +ARR I +++++ +G + YL +
Sbjct: 181 GNGHERDFAYNSNVYILDLYNADIYPRDKDARRGISKEIKIRTGEKDDRYLMLIKLNYPT 240
Query: 263 AGHTFDPELVIYNAGTDILEGDPLGML 289
F P++VIYNAGTDIL+GDPLG L
Sbjct: 241 ILDEFKPDIVIYNAGTDILDGDPLGGL 267
>gi|156393770|ref|XP_001636500.1| predicted protein [Nematostella vectensis]
gi|156223604|gb|EDO44437.1| predicted protein [Nematostella vectensis]
Length = 364
Score = 307 bits (787), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 148/270 (54%), Positives = 189/270 (70%), Gaps = 1/270 (0%)
Query: 23 SSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEP 82
+S LY DI + P++YS Y+I F+G+E+LHPFDS KWGR+ L +D + +VEP
Sbjct: 21 ASHLYIDIKATQWPIVYSSGYNIGFMGLERLHPFDSGKWGRVFNMLKEAKLIDDSTVVEP 80
Query: 83 LEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTIL 142
E S+EDLL+VH++ YL SL+ S V+ I EVPPVA PN +VQ K+L P R Q GGTIL
Sbjct: 81 REVSREDLLIVHTKKYLDSLKWSVVVAQICEVPPVAFLPNFIVQHKLLRPLRLQTGGTIL 140
Query: 143 AAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLN-ISRVMIIDLDAH 201
AAKLA ERGWAIN+GGGFHHCS GGGFCAYADISL + + F + + +VMIIDLDAH
Sbjct: 141 AAKLAMERGWAINIGGGFHHCSGTSGGGFCAYADISLAVMFLFNHFDSVKKVMIIDLDAH 200
Query: 202 QGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALE 261
QGNGHE DF + RVYI+D +N IYP + + I + V++ + TT +EYL + +
Sbjct: 201 QGNGHEADFIKEERVYIMDAYNSHIYPGCMKVKSAIKRDVQLENFTTDSEYLPLIKWHVP 260
Query: 262 VAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
A F P+ +IYNAGTDILEGDPLG L +
Sbjct: 261 EALDEFCPDAIIYNAGTDILEGDPLGSLSI 290
>gi|91080831|ref|XP_970656.1| PREDICTED: similar to Histone deacetylase 11 (HD11) [Tribolium
castaneum]
gi|270005420|gb|EFA01868.1| hypothetical protein TcasGA2_TC007473 [Tribolium castaneum]
Length = 331
Score = 306 bits (783), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 146/272 (53%), Positives = 195/272 (71%), Gaps = 2/272 (0%)
Query: 22 LSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVE 81
+++KLY DI + P+IY P+Y++ FLG+EKLHPFD+ KWG I ++L S G ++ +
Sbjct: 1 MNTKLYVDIGPEQWPIIYRPEYNVRFLGLEKLHPFDAGKWGNIYKYLKSCGLVNDETLSV 60
Query: 82 PLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTI 141
P EA+ EDLL VH++ YLKSL+ S NV++I EV P+ L PN LVQR L P R Q GG++
Sbjct: 61 PNEATTEDLLTVHTKKYLKSLKCSFNVALIAEVLPLCLVPNYLVQRGYLRPMRFQTGGSV 120
Query: 142 LAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQ--LNISRVMIIDLD 199
LA KLA ERGWAIN+GGGFHHC +GGGFC YADI+L IH+ F ++ VMI+DLD
Sbjct: 121 LAGKLALERGWAINIGGGFHHCCGSKGGGFCVYADITLLIHFVFNHHPRSVQNVMIVDLD 180
Query: 200 AHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEA 259
AHQGNG+++DF + VYI+D++N GIYP D A+ +I +KVE+ T +EYL K+ +
Sbjct: 181 AHQGNGYQRDFKDNPNVYIIDVYNKGIYPFDKLAKEYITRKVELAHFTEDDEYLDKVAKN 240
Query: 260 LEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
L A F P+L++YNAGTDIL+GD LG L V
Sbjct: 241 LTEALAEFCPQLIVYNAGTDILKGDALGCLSV 272
>gi|334338492|ref|XP_003341796.1| PREDICTED: histone deacetylase 11-like [Monodelphis domestica]
Length = 476
Score = 304 bits (779), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 154/269 (57%), Positives = 187/269 (69%), Gaps = 1/269 (0%)
Query: 24 SKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPL 83
+ LY ++ P++YSP Y+I FLG+EKLHPFD KWGR+ L FL IVE
Sbjct: 152 TSLYREVSETCWPIVYSPKYNIKFLGLEKLHPFDVEKWGRVVHLLKEGNFLSDVMIVEAQ 211
Query: 84 EASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA 143
E S+EDL V H+E YL+ L+ S +V+ IIE+ P+A PN LVQR VL P R Q GGTI+A
Sbjct: 212 EVSEEDLKVAHTEQYLRKLKCSFSVAKIIEMLPIAFIPNFLVQRTVLRPLRFQTGGTIMA 271
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAHQ 202
KLA + GWAIN+GGGFHHCS GG FC YADI+LCI + F ++ ISRV IIDLDAHQ
Sbjct: 272 GKLAVDYGWAINIGGGFHHCSGSRGGRFCIYADITLCIKFLFERVAGISRVTIIDLDAHQ 331
Query: 203 GNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEV 262
GNGHE DF DSRVYI+D++N IYP D A+R I Q VE+ T EYL+K+ E LE+
Sbjct: 332 GNGHETDFLDDSRVYIMDVYNYHIYPYDSIAKRAIRQMVELDWNTEDEEYLEKVKEHLEM 391
Query: 263 AGHTFDPELVIYNAGTDILEGDPLGMLKV 291
A + P LVIYNAGTDI+ GDPLG L V
Sbjct: 392 ALDEWLPHLVIYNAGTDIMVGDPLGGLSV 420
>gi|340381662|ref|XP_003389340.1| PREDICTED: histone deacetylase 11-like, partial [Amphimedon
queenslandica]
Length = 270
Score = 300 bits (769), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 146/274 (53%), Positives = 194/274 (70%), Gaps = 8/274 (2%)
Query: 5 SSPSVTTDAETLKRNRILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRI 64
+SP+V D N SKLY D+ K P++YSPDYDISF +E +HPFDS+KW R+
Sbjct: 3 NSPTVPED------NSGEDSKLYIDVDRHKWPILYSPDYDISFWKLETIHPFDSTKWKRV 56
Query: 65 CQFLSSEGFLDK-NCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNC 123
Q L+ + L IV+P EAS DLLVVH++ YL+SL+SS NV++++EVPP+A+ PN
Sbjct: 57 YQLLNEKNMLKGLEDIVQPNEASVSDLLVVHTQEYLESLKSSTNVAMVVEVPPLAIVPNY 116
Query: 124 LVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHY 183
+VQ K+L PFR Q GGTILA KLA ERGWAIN+GGGFHHC + EGGGFCAYADI+L I +
Sbjct: 117 IVQNKMLRPFRYQTGGTILAGKLAMERGWAINIGGGFHHCCSGEGGGFCAYADITLSIRF 176
Query: 184 AFVQL-NISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVE 242
F ++ ++ +VMI+D DAHQGNGHE+DF D +VYI+DM+N IYP D +A+ I+ K+E
Sbjct: 177 LFQRVPDVKKVMIVDFDAHQGNGHERDFMDDDKVYIMDMYNRWIYPNDIKAKSAINMKIE 236
Query: 243 VVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNA 276
+ T YL+ + L A F P++V+YNA
Sbjct: 237 LDVHTGDETYLRHIRRKLPEALDEFHPDIVVYNA 270
>gi|332231745|ref|XP_003265055.1| PREDICTED: histone deacetylase 11 isoform 1 [Nomascus leucogenys]
Length = 319
Score = 300 bits (768), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 144/245 (58%), Positives = 179/245 (73%), Gaps = 1/245 (0%)
Query: 48 LGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPN 107
+G+EKLHPFD+ KWG++ FL E L N +VE EAS+EDLLVVH+ YL L+ S
Sbjct: 1 MGLEKLHPFDAGKWGKVINFLKEEKLLSDNMLVEAREASEEDLLVVHTRRYLNELKWSFA 60
Query: 108 VSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADE 167
V+ I E+PPV PN LVQRKVL P R Q GGTI+A KLA ERGWAINVGGGFHHCS+D
Sbjct: 61 VATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIMAGKLAVERGWAINVGGGFHHCSSDR 120
Query: 168 GGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGI 226
GGGFCAYADI+L I + F ++ ISR IIDLDAHQGNGHE+DF D RVYI+D++N I
Sbjct: 121 GGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHERDFMDDKRVYIMDVYNRHI 180
Query: 227 YPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPL 286
YP D A++ I +KVE+ GT +EYL K++ ++ + P++V+YNAGTDILEGD L
Sbjct: 181 YPGDRFAKQAIRRKVELEWGTEDDEYLDKVERNIKKSLQEHLPDVVVYNAGTDILEGDRL 240
Query: 287 GMLKV 291
G L +
Sbjct: 241 GGLSI 245
>gi|11611547|dbj|BAB18987.1| hypothetical protein [Macaca fascicularis]
Length = 319
Score = 299 bits (766), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 144/245 (58%), Positives = 179/245 (73%), Gaps = 1/245 (0%)
Query: 48 LGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPN 107
+G+EKLHPFD+ KWG++ FL E L + +VE EAS+EDLLVVH+ YL L+ S
Sbjct: 1 MGLEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEAREASEEDLLVVHTRRYLNELKWSFA 60
Query: 108 VSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADE 167
V+ I E+PPV PN LVQRKVL P R Q GGTI+A KLA ERGWAINVGGGFHHCS+D
Sbjct: 61 VATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIMAGKLAVERGWAINVGGGFHHCSSDR 120
Query: 168 GGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGI 226
GGGFCAYADI+L I + F ++ ISR IIDLDAHQGNGHE+DF D RVYI+D++N I
Sbjct: 121 GGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHERDFMDDKRVYIMDVYNRHI 180
Query: 227 YPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPL 286
YP D A++ I +KVE+ GT +EYL K++ +E + P++V+YNAGTDILEGD L
Sbjct: 181 YPGDRFAKQAIRRKVELEWGTEDDEYLDKVERNIEKSLQEHLPDVVVYNAGTDILEGDRL 240
Query: 287 GMLKV 291
G L +
Sbjct: 241 GGLSI 245
>gi|332231747|ref|XP_003265056.1| PREDICTED: histone deacetylase 11 isoform 2 [Nomascus leucogenys]
Length = 343
Score = 293 bits (750), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 143/273 (52%), Positives = 186/273 (68%), Gaps = 24/273 (8%)
Query: 20 RILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCI 79
R+ +++LY +P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L N +
Sbjct: 20 RLHTTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDNML 79
Query: 80 VEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGG 139
VE EAS+EDLLVVH+ YL L+ RKVL P R Q GG
Sbjct: 80 VEAREASEEDLLVVHTRRYLNELK-----------------------RKVLRPLRTQTGG 116
Query: 140 TILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIIDL 198
TI+A KLA ERGWAINVGGGFHHCS+D GGGFCAYADI+L I + F ++ ISR IIDL
Sbjct: 117 TIMAGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDL 176
Query: 199 DAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDE 258
DAHQGNGHE+DF D RVYI+D++N IYP D A++ I +KVE+ GT +EYL K++
Sbjct: 177 DAHQGNGHERDFMDDKRVYIMDVYNRHIYPGDRFAKQAIRRKVELEWGTEDDEYLDKVER 236
Query: 259 ALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
++ + P++V+YNAGTDILEGD LG L +
Sbjct: 237 NIKKSLQEHLPDVVVYNAGTDILEGDRLGGLSI 269
>gi|402585803|gb|EJW79742.1| HDAC11 protein [Wuchereria bancrofti]
Length = 339
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 146/279 (52%), Positives = 185/279 (66%), Gaps = 15/279 (5%)
Query: 13 AETLKRNRILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEG 72
A++ + + +SKLY +I +LP++Y P Y+ISF GIE+ HPFDS KWGR+ + L G
Sbjct: 20 ADSRQLAAVKASKLYKEIERGQLPIVYHPVYNISFCGIERCHPFDSRKWGRVYETLLQSG 79
Query: 73 FLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYP 132
++N V PLEAS +DL VVHS +YL SL V+ ++EV PVAL P C
Sbjct: 80 MFEENQTVRPLEASMDDLRVVHSSTYLSSLCCPCYVAKMVEVTPVALIPPC--------- 130
Query: 133 FRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISR 192
GTILAAKLA GWAIN+GGGFHH S +GGGFC YADI+L + + F IS+
Sbjct: 131 ------GTILAAKLALTSGWAINIGGGFHHASRSKGGGFCIYADITLALTFLFSNQLISK 184
Query: 193 VMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEY 252
MI+DLDAHQGNGHE DFS D+RVYILDMFN IYP D ARR I + V + GT +EY
Sbjct: 185 AMIVDLDAHQGNGHENDFSGDNRVYILDMFNSRIYPHDLRARRAIRRSVHLRVGTQDSEY 244
Query: 253 LKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
L L LE + F P++++YNAGTD L+GDPLG+L +
Sbjct: 245 LSLLSNNLEDVLNEFQPDIIVYNAGTDCLQGDPLGLLSI 283
>gi|339249801|ref|XP_003373888.1| histone deacetylase 2 [Trichinella spiralis]
gi|316969917|gb|EFV53946.1| histone deacetylase 2 [Trichinella spiralis]
Length = 359
Score = 290 bits (743), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 144/272 (52%), Positives = 187/272 (68%), Gaps = 2/272 (0%)
Query: 20 RILSSKLYFDIPIFKL-PLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNC 78
RI SSKLY + L ++ P YDI F GIEKLHPFD+ KWGR+ L G++++
Sbjct: 10 RINSSKLYAPLKEQGLHSFVFDPIYDIRFFGIEKLHPFDAGKWGRVYNKLVKRGYINEQH 69
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVG 138
I P EA +DLL+VHS+SYL +L + ++ I+EVP + FP C++ RKVL FR Q G
Sbjct: 70 ICRPREAQYDDLLIVHSKSYLSTLHWNVLIARIMEVPLLIFFPACVIDRKVLKSFRYQTG 129
Query: 139 GTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDL 198
GT+LA +LA E G A+N+GGGFHHCS+ GGGFC YADI+L I + F Q + +VMI+DL
Sbjct: 130 GTVLAVRLAIECGAAVNLGGGFHHCSSKSGGGFCPYADITLAIKFLFAQRLVEKVMIVDL 189
Query: 199 DAHQGNGHEKDF-SSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLD 257
DAHQGNGHE+DF +S VYILDM+N IYPRD +A++ I + VE+ S T+ Y L
Sbjct: 190 DAHQGNGHERDFLTSTDNVYILDMYNCDIYPRDVKAKKAIRKAVEIKSQTSDQRYFSLLK 249
Query: 258 EALEVAGHTFDPELVIYNAGTDILEGDPLGML 289
+AL+ A F P+LV+YNAGTD L DPLG L
Sbjct: 250 KALDEAVLEFQPQLVLYNAGTDSLTNDPLGNL 281
>gi|297669995|ref|XP_002813165.1| PREDICTED: histone deacetylase 11 isoform 2 [Pongo abelii]
Length = 347
Score = 290 bits (742), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 141/270 (52%), Positives = 184/270 (68%), Gaps = 24/270 (8%)
Query: 23 SSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEP 82
+++LY +P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L + +VE
Sbjct: 27 TTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEA 86
Query: 83 LEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTIL 142
EAS+EDLLVVH+ YL L+ RKVL P R Q GGTI+
Sbjct: 87 REASEEDLLVVHTRRYLNELK-----------------------RKVLRPLRTQTGGTIM 123
Query: 143 AAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAH 201
A KLA ERGWAINVGGGFHHCS+D GGGFCAYADI+L I + F ++ ISR IIDLDAH
Sbjct: 124 AGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIQFLFERVEGISRATIIDLDAH 183
Query: 202 QGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALE 261
QGNGHE+DF D RVYI+D++N IYP D A++ I +KVE+ GT +EYL K++ ++
Sbjct: 184 QGNGHERDFMDDKRVYIMDVYNRHIYPGDRFAKQAIRRKVELEWGTEDDEYLDKVERNIK 243
Query: 262 VAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ P++V+YNAGTDILEGD LG L +
Sbjct: 244 KSLQEHLPDVVVYNAGTDILEGDRLGGLSI 273
>gi|426339525|ref|XP_004033699.1| PREDICTED: histone deacetylase 11 isoform 2 [Gorilla gorilla
gorilla]
Length = 349
Score = 290 bits (741), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 141/270 (52%), Positives = 184/270 (68%), Gaps = 24/270 (8%)
Query: 23 SSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEP 82
+++LY +P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L + +VE
Sbjct: 29 TTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEA 88
Query: 83 LEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTIL 142
EAS+EDLLVVH+ YL L+ RKVL P R Q GGTI+
Sbjct: 89 REASEEDLLVVHTRRYLNELK-----------------------RKVLRPLRTQTGGTIM 125
Query: 143 AAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAH 201
A KLA ERGWAINVGGGFHHCS+D GGGFCAYADI+L I + F ++ ISR IIDLDAH
Sbjct: 126 AGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAH 185
Query: 202 QGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALE 261
QGNGHE+DF D RVYI+D++N IYP D A++ I +KVE+ GT +EYL K++ ++
Sbjct: 186 QGNGHERDFMDDKRVYIMDVYNRHIYPGDRFAKQAIRRKVELEWGTEDDEYLDKVERNIK 245
Query: 262 VAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ P++V+YNAGTDILEGD LG L +
Sbjct: 246 KSLQEHLPDVVVYNAGTDILEGDRLGGLSI 275
>gi|324513441|gb|ADY45523.1| Histone deacetylase 11 [Ascaris suum]
Length = 365
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 141/274 (51%), Positives = 184/274 (67%), Gaps = 3/274 (1%)
Query: 21 ILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIV 80
+ ++LY I + P++Y Y+ISF GIEKLHPFDS+KWGR+ L G L + V
Sbjct: 33 VTETRLYSGIRADQWPIVYHSLYNISFFGIEKLHPFDSAKWGRVYNKLIESGMLTEEQFV 92
Query: 81 EPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGT 140
+ +EAS+ DL VVH+ YL SL V+ ++EV VA P+ ++ + +L PFR GG+
Sbjct: 93 QAVEASEHDLRVVHTSCYLASLHCPCRVARLVEVAIVAFLPSFVIDKYLLKPFRYHTGGS 152
Query: 141 ILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDA 200
ILAA+LA ER WAIN+GGGFHH S GGGFC YADISL +++ F+ ISR MI+DLDA
Sbjct: 153 ILAARLALERNWAINLGGGFHHASRSRGGGFCVYADISLALNFLFLNRLISRAMIVDLDA 212
Query: 201 H---QGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLD 257
H QGNGHE DF+ D+RVYI DMFN IYP D+ A+ I + V + SGT EYL++L
Sbjct: 213 HQVLQGNGHEHDFAGDNRVYIFDMFNYQIYPSDFVAKNAISRSVPLRSGTGDTEYLRQLS 272
Query: 258 EALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
L A F +++IYNAGTD LEGDPLG+L +
Sbjct: 273 RNLSAALGEFSADIIIYNAGTDCLEGDPLGLLSL 306
>gi|170579015|ref|XP_001894638.1| histone deacetylase 11 [Brugia malayi]
gi|158598650|gb|EDP36504.1| histone deacetylase 11, putative [Brugia malayi]
Length = 380
Score = 284 bits (726), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 148/296 (50%), Positives = 188/296 (63%), Gaps = 27/296 (9%)
Query: 23 SSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEP 82
+SKLY +I +LP++Y P Y+ISF GIE+ HPFDS KWGR+ + L G ++N + P
Sbjct: 29 ASKLYKEIERGQLPIVYHPVYNISFCGIERCHPFDSRKWGRVYETLLQSGMFEENQTIRP 88
Query: 83 LEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVG---- 138
LEAS +DL VVHS +YL SL V+ ++EV PVAL P C++ + +L PFR
Sbjct: 89 LEASMDDLRVVHSSTYLSSLCCPCYVAKMVEVTPVALIPPCIINKVLLKPFRYHTDKFDE 148
Query: 139 -----------------------GTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYA 175
GTILAAKLA GWAIN+GGGFHH S +GGGFC YA
Sbjct: 149 HTSIYVFIIVHDYANCQLVFNACGTILAAKLALTSGWAINIGGGFHHASRSKGGGFCIYA 208
Query: 176 DISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARR 235
DI+L + + F IS+ MI+DLDAHQGNGHE DFS DSRVYILDMFN IYP D ARR
Sbjct: 209 DITLALTFLFSNQLISKAMIVDLDAHQGNGHENDFSGDSRVYILDMFNXRIYPHDLRARR 268
Query: 236 FIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
I + + + GT +EYL L LE + F P++++YNAGTD L+GDPLG+L +
Sbjct: 269 AIRRSIHLXVGTQDSEYLSLLSNNLEDVLNEFQPDIIVYNAGTDCLQGDPLGLLSI 324
>gi|254212167|gb|ACT65744.1| histone deacetylase family RPD3/HDA1 class III [Hordeum vulgare]
Length = 225
Score = 283 bits (725), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 128/166 (77%), Positives = 153/166 (92%)
Query: 126 QRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAF 185
Q+++LYPFRKQVGG+IL+AKLA ERGWAINVGGGFHHCSA+EGGGFCAYADISLCI +AF
Sbjct: 1 QQRLLYPFRKQVGGSILSAKLALERGWAINVGGGFHHCSAEEGGGFCAYADISLCIQFAF 60
Query: 186 VQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVS 245
V+LNISRVMIIDLDAHQGNG+EKDF++D RVYILDM+N GIYP DY A+R+IDQK+E+VS
Sbjct: 61 VRLNISRVMIIDLDAHQGNGYEKDFANDGRVYILDMYNAGIYPFDYAAKRYIDQKIELVS 120
Query: 246 GTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
GT T++YL +LD+AL+VA F P+L+IYNAGTDIL+GDPLG LK+
Sbjct: 121 GTETDDYLDQLDKALKVAQTRFQPQLIIYNAGTDILDGDPLGNLKI 166
>gi|393906996|gb|EJD74475.1| hypothetical protein LOAG_18214 [Loa loa]
Length = 396
Score = 283 bits (723), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 144/313 (46%), Positives = 185/313 (59%), Gaps = 42/313 (13%)
Query: 21 ILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIV 80
+ +SKLY +I +LP++Y P Y+ISF GIE+ HPFDS KWGR+ + L G ++ +
Sbjct: 28 VKTSKLYKEIEQGQLPIVYHPIYNISFCGIERCHPFDSRKWGRVYETLLQSGMFEERQTI 87
Query: 81 EPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--- 137
P EAS +DL VVHS +YL SL+ V+ ++E+ PVAL P C++ + +L P R
Sbjct: 88 RPSEASMDDLRVVHSSTYLSSLRCPCYVAKMVEITPVALLPPCIINKVLLKPLRYHTDKL 147
Query: 138 ---------------------------------------GGTILAAKLAKERGWAINVGG 158
GGT+LAAKLA GWAIN+GG
Sbjct: 148 RTDCVKCIGAYSLKSALCCNAALFEVAQVDKCIFLSSFEGGTVLAAKLALTSGWAINIGG 207
Query: 159 GFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYI 218
GFHH S +GGGFC YADI+L + + F IS+ +I+DLDAHQGNGHE DFS DSRVYI
Sbjct: 208 GFHHASRSKGGGFCIYADITLALTFLFSSQLISKAVIVDLDAHQGNGHENDFSGDSRVYI 267
Query: 219 LDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGT 278
LDMFN IYP D ARR I + V + GT EYL L LE F P++++YNAGT
Sbjct: 268 LDMFNSRIYPYDLRARRAIKRSVHLHVGTQDAEYLSLLSSNLEDVLSEFRPDIIVYNAGT 327
Query: 279 DILEGDPLGMLKV 291
D L GDPLG+L +
Sbjct: 328 DCLRGDPLGLLSI 340
>gi|347966468|ref|XP_321350.5| AGAP001736-PA [Anopheles gambiae str. PEST]
gi|333470046|gb|EAA00854.5| AGAP001736-PA [Anopheles gambiae str. PEST]
Length = 361
Score = 282 bits (721), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 143/296 (48%), Positives = 194/296 (65%), Gaps = 7/296 (2%)
Query: 2 SSSSSPSVTTDAETLKRNRILSSKLYFDIPIFK--LPLIYSPDYDISFLGIEKLHPFDSS 59
+ SS S TD E K + KL ++PI + +P++Y P+Y + FLG++KLHPFD++
Sbjct: 11 ADQSSMSSGTD-EDDKEDEAAGGKLTAELPIGRDRIPIVYRPEYGVRFLGLQKLHPFDAA 69
Query: 60 KWGRICQFLSSEGFLDKNC-IVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVA 118
K G I + L + G + + + P E + E+LL VH++ Y+ SL+ S NV+ I E+PP+
Sbjct: 70 KGGNIYRLLKTNGLIQTDGDVYAPNEITLEELLAVHTQRYIDSLKWSLNVAKIAEIPPLL 129
Query: 119 LFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG--WAINVGGGFHHCSADEGGGFCAYAD 176
PNC VQR L P R Q GG++LAA+ A E G WAIN+GGGFHHCSAD GGGFC YAD
Sbjct: 130 FVPNCFVQRSYLRPMRYQTGGSLLAARAALESGLGWAINLGGGFHHCSADRGGGFCPYAD 189
Query: 177 ISLCIHYAFVQ-LNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARR 235
I+L + I R++I+DLDAHQGNG+E+D D RV+ILDM+N IYPRD A+
Sbjct: 190 ITLAVKMLQSSGKGIERILIVDLDAHQGNGYERDLMEDRRVFILDMYNYRIYPRDQHAKL 249
Query: 236 FIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
I + VE+ T EYL+KL L + F+P +IYNAGTDIL+GDPLG+L +
Sbjct: 250 AIRRAVELKPHTDDEEYLRKLKHCLSQSIAEFEPNFIIYNAGTDILKGDPLGLLDI 305
>gi|289742065|gb|ADD19780.1| putative histone deacetylase [Glossina morsitans morsitans]
Length = 359
Score = 273 bits (698), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 135/258 (52%), Positives = 174/258 (67%), Gaps = 1/258 (0%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
P++YS Y + F +EKLHPFD+ K I + L+ ++ EPLE SKE+LL VH
Sbjct: 47 FPIVYSKQYGVHFGKLEKLHPFDAQKGKHIAKLLNEAKLIENWKFYEPLEISKEELLKVH 106
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAI 154
+ YL+SL S N + I E+P +A PNC VQ L P R Q G+ILA KLA + GWAI
Sbjct: 107 TPEYLRSLNWSINAAKISEIPLLAFVPNCFVQCGYLKPMRFQTAGSILAGKLALDHGWAI 166
Query: 155 NVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLN-ISRVMIIDLDAHQGNGHEKDFSSD 213
N+GGGFHHC + GGGFCAYADI+L I F + + I ++MIIDLDAHQGNGHE+DF ++
Sbjct: 167 NLGGGFHHCCSYRGGGFCAYADITLLIQRTFAEESYIKKIMIIDLDAHQGNGHERDFLNN 226
Query: 214 SRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVI 273
S VYI+DM+N IYP+D A+ ID VE++ T EYL+ L L+ A + F P+LV+
Sbjct: 227 SNVYIMDMYNVCIYPKDEPAKLAIDCGVELLPKTEDAEYLRYLKRGLQFALNEFRPQLVV 286
Query: 274 YNAGTDILEGDPLGMLKV 291
YNAGTDIL GDPLG L +
Sbjct: 287 YNAGTDILLGDPLGALSI 304
>gi|444717454|gb|ELW58284.1| Histone deacetylase 11 [Tupaia chinensis]
Length = 372
Score = 272 bits (695), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 143/301 (47%), Positives = 178/301 (59%), Gaps = 54/301 (17%)
Query: 48 LGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSL----- 102
+G+EKLHPFD+ KWG++ FL + L + +VE EAS+EDLLVVH+ YL L
Sbjct: 1 MGLEKLHPFDAGKWGKVINFLKEDKLLSDSTLVEAREASEEDLLVVHTRRYLNELKPRPV 60
Query: 103 ------------------------------------------------QSSPNVSIIIEV 114
Q S V+ I E+
Sbjct: 61 HVQSPVQHVSHCTCAPMGWPASLPGCESWGEDEQGLGNPAGISYLFTKQWSFAVATITEI 120
Query: 115 PPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAY 174
PPV PN LVQRKVL P R Q GGTI+ KLA ERGWAINVGGGFHHCS+D GGGFCAY
Sbjct: 121 PPVIFLPNFLVQRKVLRPLRTQTGGTIMVGKLAVERGWAINVGGGFHHCSSDRGGGFCAY 180
Query: 175 ADISLCIHYAFVQL-NISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEA 233
ADI+L I + F ++ ISR IIDLDAHQGNGHE+DF D RVYI+D++N IYP D A
Sbjct: 181 ADITLAIKFLFERVEGISRATIIDLDAHQGNGHERDFMGDKRVYIMDVYNRHIYPGDRFA 240
Query: 234 RRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKVKW 293
++ I +KVE+ G +EYL K++ +E A P++V+YNAGTD+LEGD LG L +
Sbjct: 241 KQAIRRKVELEWGVEDDEYLDKVERNMEKALQEHPPDVVVYNAGTDVLEGDRLGGLSISP 300
Query: 294 G 294
G
Sbjct: 301 G 301
>gi|312379378|gb|EFR25672.1| hypothetical protein AND_08794 [Anopheles darlingi]
Length = 354
Score = 271 bits (692), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 129/262 (49%), Positives = 178/262 (67%), Gaps = 4/262 (1%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIV-EPLEASKEDLLV 92
+LP++Y +Y + F G++KLHPFD++K I + L + G + + V P E + ++LL
Sbjct: 37 RLPIVYRREYSVRFCGLQKLHPFDAAKGTNIYRLLKAGGLISPDSTVYTPPEVTLDELLD 96
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG- 151
VH++ Y++SL+ S NV+ I E+PP+ PNC VQR L P R Q GGT+LAA++A + G
Sbjct: 97 VHTKRYIESLKWSLNVAKIAEIPPLMFVPNCFVQRSYLRPMRYQTGGTLLAARIALQSGL 156
Query: 152 -WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQ-LNISRVMIIDLDAHQGNGHEKD 209
WAIN+GGGFHHCSAD GGGFC YADI+L + I R++IIDLDAHQGNG+ +D
Sbjct: 157 GWAINLGGGFHHCSADRGGGFCPYADITLTVRMLLAGGTGIERILIIDLDAHQGNGYARD 216
Query: 210 FSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDP 269
D+ VYILDM+N IYPRD++A+ I + VE+ T EY+ KL LE + F P
Sbjct: 217 LMGDASVYILDMYNYQIYPRDHQAKLAIGRAVELKPHTDDEEYIGKLKRCLEQSLAEFQP 276
Query: 270 ELVIYNAGTDILEGDPLGMLKV 291
+IYNAGTD+L+GDPLG+L +
Sbjct: 277 NFIIYNAGTDVLKGDPLGLLDI 298
>gi|195446307|ref|XP_002070720.1| GK10873 [Drosophila willistoni]
gi|194166805|gb|EDW81706.1| GK10873 [Drosophila willistoni]
Length = 342
Score = 270 bits (691), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 136/268 (50%), Positives = 175/268 (65%), Gaps = 2/268 (0%)
Query: 29 DIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKE 88
D+ KLP++YS Y + F G+EKLHPFD++K I + L +E L EP E +KE
Sbjct: 25 DVGSSKLPIVYSKKYAVRFAGLEKLHPFDAAKGKHIHKRLCAELLLGNGDFYEPKEVTKE 84
Query: 89 DLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAK 148
L +H+ YL SL+ S NV+ I EVP ++ PN VQ L P R Q G+ILA KLA
Sbjct: 85 QLRRIHTRKYLTSLECSMNVASIAEVPLLSFVPNTYVQSCYLRPMRFQTAGSILAGKLAL 144
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAF--VQLNISRVMIIDLDAHQGNGH 206
E GW+IN+GGGFHHC +GGGFC YADIS+ + F + R+MI+DLDAHQGNGH
Sbjct: 145 EYGWSINLGGGFHHCCTSKGGGFCPYADISMLVVRLFELEPFRVQRIMIVDLDAHQGNGH 204
Query: 207 EKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHT 266
E+DF + + VYILDM+N IYP+D+EA+ I VE+ T + YLKKL + L+ A
Sbjct: 205 ERDFHNVAAVYILDMYNASIYPKDHEAKTTIRCAVELRPRTEDSFYLKKLAQCLKTAVAE 264
Query: 267 FDPELVIYNAGTDILEGDPLGMLKVKWG 294
F P +VIYNAGTDIL+GDPLG L + G
Sbjct: 265 FKPNVVIYNAGTDILDGDPLGNLAITPG 292
>gi|195573625|ref|XP_002104792.1| GD18261 [Drosophila simulans]
gi|194200719|gb|EDX14295.1| GD18261 [Drosophila simulans]
Length = 343
Score = 268 bits (684), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 131/260 (50%), Positives = 176/260 (67%), Gaps = 2/260 (0%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
KLP+++S +Y + F G+E+LHPFD++K I + L ++ LD EP E +K+ L +
Sbjct: 31 KLPIVFSRNYAVRFGGLERLHPFDAAKGKHIHKLLCAQLQLDDGSFYEPTELTKDQLRRI 90
Query: 94 HSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWA 153
H+ YLKSL+ S NV+ I EVP +A PN +QR L P R Q G+ILA KLA + GWA
Sbjct: 91 HTRDYLKSLRWSMNVACIAEVPVMAFVPNRYIQRSYLRPMRFQAAGSILAGKLALDYGWA 150
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQ--LNISRVMIIDLDAHQGNGHEKDFS 211
IN+GGGFHHC + GGGFC YADISL I F Q + R+MI+DLDAHQGNGHE+DF+
Sbjct: 151 INLGGGFHHCCSYRGGGFCPYADISLLIVRLFEQEPFRVRRIMIVDLDAHQGNGHERDFN 210
Query: 212 SDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPEL 271
+ + VYILDM+N +YPRD+ A+ I VE+ + T YL++L L + F P++
Sbjct: 211 NVAAVYILDMYNAFVYPRDHVAKESIRCAVELRNYTEDGFYLRQLKRCLMQSLAEFRPDM 270
Query: 272 VIYNAGTDILEGDPLGMLKV 291
V+YNAGTD+LEGDPLG L +
Sbjct: 271 VVYNAGTDVLEGDPLGNLAI 290
>gi|195331776|ref|XP_002032575.1| GM23455 [Drosophila sechellia]
gi|194121518|gb|EDW43561.1| GM23455 [Drosophila sechellia]
Length = 343
Score = 268 bits (684), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 131/260 (50%), Positives = 176/260 (67%), Gaps = 2/260 (0%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
KLP+++S +Y + F G+E+LHPFD++K I + L ++ LD EP E +K+ L +
Sbjct: 31 KLPIVFSRNYAVRFGGLERLHPFDAAKGKHIHKLLCAQLQLDDGSFYEPTELTKDQLRRI 90
Query: 94 HSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWA 153
H+ YLKSL+ S NV+ I EVP +A PN +QR L P R Q G+ILA KLA + GWA
Sbjct: 91 HTRDYLKSLRWSMNVACIAEVPVMAFVPNRYIQRSYLRPMRFQAAGSILAGKLALDYGWA 150
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQ--LNISRVMIIDLDAHQGNGHEKDFS 211
IN+GGGFHHC + GGGFC YADISL I F Q + R+MI+DLDAHQGNGHE+DF+
Sbjct: 151 INLGGGFHHCCSYRGGGFCPYADISLLIVRLFEQEPFRVRRIMIVDLDAHQGNGHERDFN 210
Query: 212 SDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPEL 271
+ + VYILDM+N +YPRD+ A+ I VE+ + T YL++L L + F P++
Sbjct: 211 NVAAVYILDMYNAFVYPRDHVAKESIRCAVELRNYTEDGFYLRQLKRCLMQSLAEFRPDM 270
Query: 272 VIYNAGTDILEGDPLGMLKV 291
V+YNAGTD+LEGDPLG L +
Sbjct: 271 VVYNAGTDVLEGDPLGNLAI 290
>gi|195504646|ref|XP_002099168.1| GE10768 [Drosophila yakuba]
gi|194185269|gb|EDW98880.1| GE10768 [Drosophila yakuba]
Length = 343
Score = 266 bits (681), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 131/260 (50%), Positives = 176/260 (67%), Gaps = 2/260 (0%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
KLP+++S +Y + F G+E+LHPFD++K I + L ++ LD+ EP E +K L +
Sbjct: 31 KLPIVFSRNYAVRFGGLERLHPFDAAKGKHIHKLLCAQLQLDEGSFYEPTELTKNQLRRI 90
Query: 94 HSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWA 153
H+ YLKSL+ S NV+ I EVP +A PN +QR L P R Q G+ILA +LA + GWA
Sbjct: 91 HTRGYLKSLRWSMNVACIAEVPVMAFVPNRYIQRSYLRPMRFQAAGSILAGRLALDYGWA 150
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQ--LNISRVMIIDLDAHQGNGHEKDFS 211
IN+GGGFHHC + GGGFC YADISL I F Q + R+MI+DLDAHQGNGHE+DF+
Sbjct: 151 INLGGGFHHCCSYRGGGFCPYADISLLIVRLFEQEPYRVRRIMIVDLDAHQGNGHERDFN 210
Query: 212 SDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPEL 271
+ + VYILDM+N +YPRD+ A+ I VE+ + T YL++L L + F P++
Sbjct: 211 NVAAVYILDMYNAFVYPRDHVAKESIRCAVELRNHTEDAFYLRQLKRCLMQSLAEFRPDV 270
Query: 272 VIYNAGTDILEGDPLGMLKV 291
VIYNAGTD+LEGDPLG L +
Sbjct: 271 VIYNAGTDVLEGDPLGNLAI 290
>gi|403268333|ref|XP_003926231.1| PREDICTED: histone deacetylase 11 [Saimiri boliviensis boliviensis]
Length = 296
Score = 266 bits (680), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 133/245 (54%), Positives = 165/245 (67%), Gaps = 24/245 (9%)
Query: 48 LGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPN 107
+G+EKLHPFD+ KWG++ FL E L + +VE EAS+EDLLVVH+ YL L+
Sbjct: 1 MGLEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEAREASEEDLLVVHTRRYLNELK---- 56
Query: 108 VSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADE 167
RKVL P R Q GGTI+A KLA ERGWAINVGGGFHHCS+D
Sbjct: 57 -------------------RKVLRPLRTQTGGTIMAGKLAVERGWAINVGGGFHHCSSDR 97
Query: 168 GGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGI 226
GGGFCAYADI+L I + F ++ ISR IIDLDAHQGNGHE+DF D RVYI+D++N I
Sbjct: 98 GGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHERDFMDDKRVYIMDVYNRHI 157
Query: 227 YPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPL 286
YP D A++ I +KVE+ GT +EYL K++ +E A P++V+YNAGTDILEGD L
Sbjct: 158 YPGDRFAKQAIRRKVELEWGTEDDEYLVKVERNIEKALQEHLPDVVVYNAGTDILEGDRL 217
Query: 287 GMLKV 291
G L +
Sbjct: 218 GGLSI 222
>gi|24649807|ref|NP_733048.1| histone deacetylase X, isoform A [Drosophila melanogaster]
gi|386766464|ref|NP_001247296.1| histone deacetylase X, isoform B [Drosophila melanogaster]
gi|7301219|gb|AAF56350.1| histone deacetylase X, isoform A [Drosophila melanogaster]
gi|227116367|gb|ACP19285.1| IP11169p [Drosophila melanogaster]
gi|383292938|gb|AFH06613.1| histone deacetylase X, isoform B [Drosophila melanogaster]
Length = 343
Score = 266 bits (680), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 130/260 (50%), Positives = 175/260 (67%), Gaps = 2/260 (0%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
KLP+++S +Y + F G+E+LHPFD++K I + L ++ LD EP E +K+ L +
Sbjct: 31 KLPIVFSRNYAVRFGGLERLHPFDAAKGKHIHKLLCAQLQLDDGSFYEPTELTKDQLRRI 90
Query: 94 HSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWA 153
H+ YLKSL+ S NV+ I EVP +A PN +QR L P R Q G+ILA KLA + GWA
Sbjct: 91 HTREYLKSLRWSMNVACIAEVPLMAFVPNRYIQRSYLRPMRFQAAGSILAGKLALDYGWA 150
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQ--LNISRVMIIDLDAHQGNGHEKDFS 211
IN+GGGFHHC + GGGFC YADISL I F Q + R+MI+DLDAHQGNGHE+DF+
Sbjct: 151 INLGGGFHHCCSYRGGGFCPYADISLLIVRLFEQEPFRVRRIMIVDLDAHQGNGHERDFN 210
Query: 212 SDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPEL 271
+ + VYI DM+N +YPRD+ A+ I VE+ + T YL++L L + F P++
Sbjct: 211 NVAAVYIFDMYNAFVYPRDHVAKESIRCAVELRNYTEDGFYLRQLKRCLMQSLAEFRPDM 270
Query: 272 VIYNAGTDILEGDPLGMLKV 291
V+YNAGTD+LEGDPLG L +
Sbjct: 271 VVYNAGTDVLEGDPLGNLAI 290
>gi|291393305|ref|XP_002713169.1| PREDICTED: histone deacetylase 11-like [Oryctolagus cuniculus]
Length = 296
Score = 266 bits (680), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 133/248 (53%), Positives = 166/248 (66%), Gaps = 24/248 (9%)
Query: 48 LGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPN 107
+G+EKLHPFD+ KWG++ FL E L +VE EAS+EDLLVVH+ YL L+
Sbjct: 1 MGLEKLHPFDAGKWGKVINFLKEEKLLTDGMLVEAREASEEDLLVVHTRRYLNELK---- 56
Query: 108 VSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADE 167
RKVL P R Q GGTI+A KLA ERGWAIN+GGGFHHCS+D
Sbjct: 57 -------------------RKVLRPLRTQTGGTIMAGKLAVERGWAINIGGGFHHCSSDR 97
Query: 168 GGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGI 226
GGGFCAYADI+L I + F ++ ISR IIDLDAHQGNGHE+DF D RVYI+D++N I
Sbjct: 98 GGGFCAYADITLAIKFLFDRVEGISRATIIDLDAHQGNGHERDFMEDKRVYIMDVYNRHI 157
Query: 227 YPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPL 286
YP D A++ I +KVE+ GT EYL K+++ +E A + P++V+YNAGTDILEGD L
Sbjct: 158 YPGDRFAKQAIRRKVELEWGTEDEEYLGKVEQHVEKALREYLPDVVVYNAGTDILEGDRL 217
Query: 287 GMLKVKWG 294
G L + G
Sbjct: 218 GGLAISPG 225
>gi|66772327|gb|AAY55475.1| IP10969p [Drosophila melanogaster]
Length = 328
Score = 266 bits (680), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 130/260 (50%), Positives = 175/260 (67%), Gaps = 2/260 (0%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
KLP+++S +Y + F G+E+LHPFD++K I + L ++ LD EP E +K+ L +
Sbjct: 16 KLPIVFSRNYAVRFGGLERLHPFDAAKGKHIHKLLCAQLQLDDGSFYEPTELTKDQLRRI 75
Query: 94 HSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWA 153
H+ YLKSL+ S NV+ I EVP +A PN +QR L P R Q G+ILA KLA + GWA
Sbjct: 76 HTREYLKSLRWSMNVACIAEVPLMAFVPNRYIQRSYLRPMRFQAAGSILAGKLALDYGWA 135
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQ--LNISRVMIIDLDAHQGNGHEKDFS 211
IN+GGGFHHC + GGGFC YADISL I F Q + R+MI+DLDAHQGNGHE+DF+
Sbjct: 136 INLGGGFHHCCSYRGGGFCPYADISLLIVRLFEQEPFRVRRIMIVDLDAHQGNGHERDFN 195
Query: 212 SDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPEL 271
+ + VYI DM+N +YPRD+ A+ I VE+ + T YL++L L + F P++
Sbjct: 196 NVAAVYIFDMYNAFVYPRDHVAKESIRCAVELRNYTEDGFYLRQLKRCLMQSLAEFRPDM 255
Query: 272 VIYNAGTDILEGDPLGMLKV 291
V+YNAGTD+LEGDPLG L +
Sbjct: 256 VVYNAGTDVLEGDPLGNLAI 275
>gi|66772255|gb|AAY55439.1| IP11069p [Drosophila melanogaster]
Length = 332
Score = 266 bits (680), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 130/260 (50%), Positives = 175/260 (67%), Gaps = 2/260 (0%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
KLP+++S +Y + F G+E+LHPFD++K I + L ++ LD EP E +K+ L +
Sbjct: 20 KLPIVFSRNYAVRFGGLERLHPFDAAKGKHIHKLLCAQLQLDDGSFYEPTELTKDQLRRI 79
Query: 94 HSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWA 153
H+ YLKSL+ S NV+ I EVP +A PN +QR L P R Q G+ILA KLA + GWA
Sbjct: 80 HTREYLKSLRWSMNVACIAEVPLMAFVPNRYIQRSYLRPMRFQAAGSILAGKLALDYGWA 139
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQ--LNISRVMIIDLDAHQGNGHEKDFS 211
IN+GGGFHHC + GGGFC YADISL I F Q + R+MI+DLDAHQGNGHE+DF+
Sbjct: 140 INLGGGFHHCCSYRGGGFCPYADISLLIVRLFEQEPFRVRRIMIVDLDAHQGNGHERDFN 199
Query: 212 SDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPEL 271
+ + VYI DM+N +YPRD+ A+ I VE+ + T YL++L L + F P++
Sbjct: 200 NVAAVYIFDMYNAFVYPRDHVAKESIRCAVELRNYTEDGFYLRQLKRCLMQSLAEFRPDM 259
Query: 272 VIYNAGTDILEGDPLGMLKV 291
V+YNAGTD+LEGDPLG L +
Sbjct: 260 VVYNAGTDVLEGDPLGNLAI 279
>gi|410951796|ref|XP_003982579.1| PREDICTED: histone deacetylase 11 [Felis catus]
Length = 296
Score = 265 bits (678), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 132/245 (53%), Positives = 163/245 (66%), Gaps = 24/245 (9%)
Query: 48 LGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPN 107
+G+EKLHPFD+ KWG++ FL E L +VE EAS EDLLVVH+ YL L+
Sbjct: 1 MGLEKLHPFDAGKWGKVISFLKEEKLLSDGMLVEAREASDEDLLVVHTRRYLNELK---- 56
Query: 108 VSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADE 167
RKVL P R Q GGTI+A KLA ERGWAINVGGGFHHCS+D
Sbjct: 57 -------------------RKVLKPLRTQTGGTIMAGKLAMERGWAINVGGGFHHCSSDR 97
Query: 168 GGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGI 226
GGGFCAYADI+L I + F ++ ISR I+DLDAHQGNGHE+DF D RVYI+D++N I
Sbjct: 98 GGGFCAYADITLAIKFLFERVEGISRATIVDLDAHQGNGHERDFMGDKRVYIMDVYNRHI 157
Query: 227 YPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPL 286
YP D A++ I +KVE+ GT +EYL K++ L+ A P++V+YNAGTDILEGD L
Sbjct: 158 YPGDRFAKQAIRRKVELEWGTEDDEYLDKVERNLQKALQEHLPDVVVYNAGTDILEGDRL 217
Query: 287 GMLKV 291
G L +
Sbjct: 218 GGLSI 222
>gi|345786364|ref|XP_541747.3| PREDICTED: histone deacetylase 11 [Canis lupus familiaris]
Length = 296
Score = 265 bits (678), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 132/245 (53%), Positives = 163/245 (66%), Gaps = 24/245 (9%)
Query: 48 LGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPN 107
+G+EKLHPFD+ KWG++ FL E L +VE EAS EDLLVVH+ YL L+
Sbjct: 1 MGLEKLHPFDAGKWGKVISFLKEEKLLSDGMLVEAREASDEDLLVVHTRRYLNELK---- 56
Query: 108 VSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADE 167
RKVL P R Q GGTI+A KLA ERGWAINVGGGFHHCS+D
Sbjct: 57 -------------------RKVLKPLRTQTGGTIMAGKLAMERGWAINVGGGFHHCSSDR 97
Query: 168 GGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGI 226
GGGFCAYADI+L I + F ++ ISR I+DLDAHQGNGHE+DF D RVYI+D++N I
Sbjct: 98 GGGFCAYADITLAIKFLFERVEGISRATIVDLDAHQGNGHERDFMGDKRVYIMDVYNRHI 157
Query: 227 YPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPL 286
YP D A++ I +KVE+ GT +EYL K++ L+ A P++V+YNAGTDILEGD L
Sbjct: 158 YPGDRFAKQAIRRKVELEWGTEDDEYLDKVERNLQKALQEHLPDVVVYNAGTDILEGDRL 217
Query: 287 GMLKV 291
G L +
Sbjct: 218 GGLSI 222
>gi|195388622|ref|XP_002052978.1| GJ23587 [Drosophila virilis]
gi|194151064|gb|EDW66498.1| GJ23587 [Drosophila virilis]
Length = 326
Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 137/261 (52%), Positives = 176/261 (67%), Gaps = 4/261 (1%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
KLP++YS +Y + F G+EKLHPFD++K I + L +E L+ +PLE +K +LL V
Sbjct: 11 KLPIVYSKNYSVRFAGLEKLHPFDAAKGKHIQRLLCAELSLECGDFYDPLEITKTELLRV 70
Query: 94 HSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWA 153
H+ YLKSL+ S NV+ I EVP + PN VQ L P R Q G+ILA KLA E GWA
Sbjct: 71 HTSKYLKSLKWSANVACIAEVPVLMFLPNFTVQSGYLRPMRYQTAGSILAGKLALEYGWA 130
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRV---MIIDLDAHQGNGHEKDF 210
IN+GGGFHHC + +GGGFC YADI+L + F +L SRV MI+DLDAHQGNGHE+DF
Sbjct: 131 INLGGGFHHCCSYKGGGFCPYADITLLLVRLF-ELESSRVQNAMIVDLDAHQGNGHERDF 189
Query: 211 SSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPE 270
+ VYILDM+N +YP+D+EA+ I VE+ T YL++L L A F P+
Sbjct: 190 KNIEAVYILDMYNAFVYPKDHEAKLSIRCGVELKHLTEDAYYLRQLSRCLMQALAEFKPD 249
Query: 271 LVIYNAGTDILEGDPLGMLKV 291
+VIYNAGTDIL+GDPLG L +
Sbjct: 250 VVIYNAGTDILKGDPLGNLAI 270
>gi|344275965|ref|XP_003409781.1| PREDICTED: histone deacetylase 11-like [Loxodonta africana]
Length = 296
Score = 264 bits (674), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 130/245 (53%), Positives = 164/245 (66%), Gaps = 24/245 (9%)
Query: 48 LGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPN 107
+G+E+LHPFD+ KWG++ FL E L + +VE EAS+EDLLVVH+ YL L+
Sbjct: 1 MGLERLHPFDAGKWGKVINFLKEEKLLSDSLLVEAREASEEDLLVVHTRRYLNELK---- 56
Query: 108 VSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADE 167
RKVL P R Q GGTI+A KLA ERGWAINVGGGFHHCS+D
Sbjct: 57 -------------------RKVLRPLRTQTGGTIMAGKLAMERGWAINVGGGFHHCSSDR 97
Query: 168 GGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGI 226
GGGFCAYADI+L I + F ++ ISR IIDLDAHQGNGHE+DF D RVYI+D++N I
Sbjct: 98 GGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHERDFMGDKRVYIMDVYNRHI 157
Query: 227 YPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPL 286
YP D A++ I +KVE+ GT +EYL K+ ++ A P++V+YNAGTD+LEGD L
Sbjct: 158 YPGDRFAKQAIRRKVELEWGTEDDEYLDKVGRNIKKALQEHRPDVVVYNAGTDVLEGDRL 217
Query: 287 GMLKV 291
G L +
Sbjct: 218 GGLSI 222
>gi|402859323|ref|XP_003894112.1| PREDICTED: histone deacetylase 11 isoform 2 [Papio anubis]
Length = 296
Score = 263 bits (673), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 132/245 (53%), Positives = 164/245 (66%), Gaps = 24/245 (9%)
Query: 48 LGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPN 107
+G+EKLHPFD+ KWG++ FL E L + +VE EAS+EDLLVVH+ YL L+
Sbjct: 1 MGLEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEAREASEEDLLVVHTRRYLNELK---- 56
Query: 108 VSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADE 167
RKVL P R Q GGTI+A KLA ERGWAINVGGGFHHCS+D
Sbjct: 57 -------------------RKVLRPLRTQTGGTIMAGKLAVERGWAINVGGGFHHCSSDR 97
Query: 168 GGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGI 226
GGGFCAYADI+L I + F ++ ISR IIDLDAHQGNGHE+DF D RVYI+D++N I
Sbjct: 98 GGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHERDFMDDKRVYIMDVYNRHI 157
Query: 227 YPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPL 286
YP D A++ I +KVE+ GT +EYL K+ +E + P++V+YNAGTDILEGD L
Sbjct: 158 YPGDRFAKQAIRRKVELEWGTEDDEYLDKVGRNIEKSLQEHLPDVVVYNAGTDILEGDRL 217
Query: 287 GMLKV 291
G L +
Sbjct: 218 GGLSI 222
>gi|209862883|ref|NP_001129513.1| histone deacetylase 11 isoform 2 [Homo sapiens]
gi|194375634|dbj|BAG56762.1| unnamed protein product [Homo sapiens]
Length = 296
Score = 263 bits (673), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 131/245 (53%), Positives = 165/245 (67%), Gaps = 24/245 (9%)
Query: 48 LGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPN 107
+G+EKLHPFD+ KWG++ FL E L + +VE EAS+EDLLVVH+ YL L+
Sbjct: 1 MGLEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEAREASEEDLLVVHTRRYLNELK---- 56
Query: 108 VSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADE 167
RKVL P R Q GGTI+A KLA ERGWAINVGGGFHHCS+D
Sbjct: 57 -------------------RKVLRPLRTQTGGTIMAGKLAVERGWAINVGGGFHHCSSDR 97
Query: 168 GGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGI 226
GGGFCAYADI+L I + F ++ ISR IIDLDAHQGNGHE+DF D RVYI+D++N I
Sbjct: 98 GGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHERDFMDDKRVYIMDVYNRHI 157
Query: 227 YPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPL 286
YP D A++ I +KVE+ GT +EYL K++ ++ + P++V+YNAGTDILEGD L
Sbjct: 158 YPGDRFAKQAIRRKVELEWGTEDDEYLDKVERNIKKSLQEHLPDVVVYNAGTDILEGDRL 217
Query: 287 GMLKV 291
G L +
Sbjct: 218 GGLSI 222
>gi|195107762|ref|XP_001998477.1| GI23615 [Drosophila mojavensis]
gi|193915071|gb|EDW13938.1| GI23615 [Drosophila mojavensis]
Length = 323
Score = 263 bits (672), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 135/260 (51%), Positives = 170/260 (65%), Gaps = 2/260 (0%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
KLP++YS Y + F G+EKLHPFD++K I Q L +E L+ PLE +KE+LL V
Sbjct: 11 KLPIVYSKKYAVRFGGLEKLHPFDAAKGKHIQQLLCAELSLECGDFYNPLEITKEELLRV 70
Query: 94 HSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWA 153
H+ YL+SL+ S V+ I EVP + PN VQ L P R Q G+ILA KLA E GWA
Sbjct: 71 HTPKYLRSLKWSAKVATIAEVPVLIFVPNVGVQSGYLRPMRYQTAGSILAGKLALEYGWA 130
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAF--VQLNISRVMIIDLDAHQGNGHEKDFS 211
IN+GGGFHHC + +GGGFC YADI+L + F L + MI+DLDAHQGNGHE+DF
Sbjct: 131 INLGGGFHHCCSSKGGGFCPYADITLLLVRLFDLEPLRVRNAMIVDLDAHQGNGHERDFK 190
Query: 212 SDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPEL 271
VYILDM+N IYP+D EA+ I VE+ T YLK+L+ L A F P++
Sbjct: 191 DTETVYILDMYNAYIYPKDNEAKLSIRCAVELKHLTEDAHYLKQLNRCLMRALAEFKPDI 250
Query: 272 VIYNAGTDILEGDPLGMLKV 291
V+YNAGTDIL+GDPLG L +
Sbjct: 251 VVYNAGTDILKGDPLGNLAI 270
>gi|332816489|ref|XP_530587.3| PREDICTED: histone deacetylase 11 [Pan troglodytes]
Length = 308
Score = 259 bits (663), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 130/270 (48%), Positives = 172/270 (63%), Gaps = 40/270 (14%)
Query: 23 SSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEP 82
+++LY +P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L + +VE
Sbjct: 4 TTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEA 63
Query: 83 LEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTIL 142
EAS+EDLLVVH+ YL L+
Sbjct: 64 REASEEDLLVVHTRRYLNELK--------------------------------------- 84
Query: 143 AAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAH 201
A KLA ERGWAINVGGGFHHCS+D GGGFCAYADI+L I + F ++ ISR IIDLDAH
Sbjct: 85 AGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAH 144
Query: 202 QGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALE 261
QGNGHE+DF D RVYI+D++N IYP D A++ I +KVE+ GT +EYL K++ ++
Sbjct: 145 QGNGHERDFMDDKRVYIMDVYNRHIYPGDRFAKQAIRRKVELEWGTEDDEYLDKVERNIK 204
Query: 262 VAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ P++V+YNAGTDILEGD LG L +
Sbjct: 205 KSLQEHLPDVVVYNAGTDILEGDRLGGLSI 234
>gi|198414517|ref|XP_002121327.1| PREDICTED: similar to histone deacetylase 11, partial [Ciona
intestinalis]
Length = 418
Score = 259 bits (662), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 125/238 (52%), Positives = 163/238 (68%), Gaps = 10/238 (4%)
Query: 64 ICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQS---------SPNVSIIIEV 114
I F++ + L N +PLE ++ DLL+ HS+ YL SL+ S NV+ I EV
Sbjct: 127 IVWFITDDKLLQNNQHFQPLEPTERDLLIAHSKEYLSSLKEKSVAGIRKWSANVARITEV 186
Query: 115 PPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAY 174
PPVAL PN +VQRKVL P R Q GG++LA KLA ERGWAIN+GGGFHHCS D GGGFCAY
Sbjct: 187 PPVALLPNFIVQRKVLLPLRLQTGGSVLAGKLAIERGWAINIGGGFHHCSGDRGGGFCAY 246
Query: 175 ADISLCIHYAFVQLN-ISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEA 233
ADI+L I + F + + I RVM++DLDAHQGNG+ +DF D RV+++D++N IYP D A
Sbjct: 247 ADITLLIKFVFAKFDAIKRVMVVDLDAHQGNGYARDFMFDDRVFVMDVYNRNIYPHDGYA 306
Query: 234 RRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+R I +KVE+ SG YL + L + F+P+L++YNAGTDIL+GD LG L +
Sbjct: 307 KRGIKRKVELTSGVDDQTYLPLVKSHLTESIGEFNPQLIVYNAGTDILQGDQLGRLNI 364
>gi|157106851|ref|XP_001649512.1| histone deacetylase [Aedes aegypti]
gi|108879745|gb|EAT43970.1| AAEL004639-PA [Aedes aegypti]
Length = 358
Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 128/264 (48%), Positives = 177/264 (67%), Gaps = 6/264 (2%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIV-EPLEASKEDLLV 92
KLP++Y P+Y + F G+++LHPFD++K G I + L + + + V P E S ++LL
Sbjct: 39 KLPIVYRPEYGVEFCGLQRLHPFDAAKGGNIYRLLKAGKLISSDSDVHRPREISTDELLD 98
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE--- 149
VH++ Y++SL+ S NV+ I E+PP+ PN VQR L P R Q G+ILAA+ A +
Sbjct: 99 VHTKRYIESLKWSINVAKIAEIPPLIFVPNYFVQRSYLRPMRYQTFGSILAARCALDGSC 158
Query: 150 -RGWAINVGGGFHHCSADEGGGFCAYADISLCIHY-AFVQLNISRVMIIDLDAHQGNGHE 207
GWAIN+GGGFHHCSAD+GGGFC YADI+L + I R+MI+DLDAHQGNG+
Sbjct: 159 GTGWAINLGGGFHHCSADDGGGFCPYADITLIVRMLQSSGKGIERIMIVDLDAHQGNGYA 218
Query: 208 KDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTF 267
+D DS V+I+DM+N IYPRD+EA+ I + VE+ EYL+KL L ++ F
Sbjct: 219 RDLMDDSGVFIMDMYNYRIYPRDHEAKLAIKRAVELKPHVGDEEYLRKLRTNLALSFDEF 278
Query: 268 DPELVIYNAGTDILEGDPLGMLKV 291
P +IYNAGTD+L+GDPLG+L +
Sbjct: 279 RPNFLIYNAGTDVLKGDPLGILDI 302
>gi|195039143|ref|XP_001990869.1| GH18019 [Drosophila grimshawi]
gi|193895065|gb|EDV93931.1| GH18019 [Drosophila grimshawi]
Length = 325
Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 133/261 (50%), Positives = 172/261 (65%), Gaps = 4/261 (1%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
KLP++YS +Y + F G+EKLHPFD++K I + L E L+ +P+E +KE L V
Sbjct: 11 KLPIVYSKNYSVRFAGLEKLHPFDAAKGKHIQELLCDELSLNAGQFYDPVEITKEQLRRV 70
Query: 94 HSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWA 153
H+ YLKSL+ S V+ I EVP + PN VQ L P R Q G+ILA KLA E GWA
Sbjct: 71 HTRKYLKSLKWSAKVACIAEVPVMIFMPNFTVQSGYLRPMRYQASGSILAGKLALEYGWA 130
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRV---MIIDLDAHQGNGHEKDF 210
IN+GGGFHHC +++GGGFC YADI+L + F L +RV MI+DLDAHQGNGHE+DF
Sbjct: 131 INLGGGFHHCCSNKGGGFCPYADITLLLVRLF-DLEPTRVRNAMIVDLDAHQGNGHERDF 189
Query: 211 SSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPE 270
+ VYILDM+N +YP D+EA+ I VE+ T YL++L L A F P+
Sbjct: 190 MNTDSVYILDMYNAFVYPMDHEAKLSIRCGVELKHLTEDAYYLRQLSRCLLQALTEFKPD 249
Query: 271 LVIYNAGTDILEGDPLGMLKV 291
+VIYNAGTD+L+GDPLG L +
Sbjct: 250 IVIYNAGTDVLKGDPLGNLAL 270
>gi|426250036|ref|XP_004018746.1| PREDICTED: LOW QUALITY PROTEIN: histone deacetylase 11 [Ovis aries]
Length = 646
Score = 257 bits (657), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 138/287 (48%), Positives = 182/287 (63%), Gaps = 24/287 (8%)
Query: 15 TLKRNRILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFL 74
+L R S++LY +P + P++YSP Y+I+FLG+E+LHPFD+ KWG++ FL E L
Sbjct: 238 SLLARRPHSTQLYQHVPDSRWPIVYSPRYNITFLGLERLHPFDAGKWGKVISFLKEEKLL 297
Query: 75 DKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFR 134
+ +VE LLVVH+ YL L+ S V+ I E+PPV PN LVQRKVL P R
Sbjct: 298 SDSTLVE------AXLLVVHTRRYLNELKWSFAVATITEIPPVIFLPNFLVQRKVLRPLR 351
Query: 135 KQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRV 193
Q GGTI+A KLA +RGWAINVGGGFHHCS+D GGGFCAYADI+L I + F ++ IS+
Sbjct: 352 TQTGGTIMAGKLAVDRGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFDRVEGISKA 411
Query: 194 MIIDLDAHQGNGHEKDFSSD---------SRVYILDMFNPGIYPRDYEARRFIDQKVEVV 244
I+DLDAHQ ++ SR++ +P P EA I +KVE+
Sbjct: 412 TIVDLDAHQVTAEQRXSQMGKQAVPPAPVSRLHAGASLSP--LP---EA---IRRKVELE 463
Query: 245 SGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
GT +EYL+K++ LE A P++V+YNAGTDILEGD LG L +
Sbjct: 464 WGTEDDEYLQKVERNLEKALQEHRPDVVVYNAGTDILEGDRLGGLAI 510
>gi|218780702|ref|YP_002432020.1| histone deacetylase superfamily protein [Desulfatibacillum
alkenivorans AK-01]
gi|218762086|gb|ACL04552.1| Putative sirtuin-type regulators for CoA ligase (histone
deacetylase superfamily) [Desulfatibacillum alkenivorans
AK-01]
Length = 355
Score = 257 bits (657), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 127/263 (48%), Positives = 169/263 (64%)
Query: 29 DIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKE 88
D P LP++YS Y+I+ GI+KLHPFDS K+GR+ ++L L I EP E S+
Sbjct: 26 DEPEIPLPIVYSKHYNITLFGIQKLHPFDSEKYGRVYKYLEKNVGLSPERIFEPEEISEL 85
Query: 89 DLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAK 148
DLL VHS YL SL+ S V+ I E+ + L P L+ +K+L P R GGT+LA +LA
Sbjct: 86 DLLRVHSREYLDSLKKSSVVAEIAEMGALKLMPGFLLDKKILKPMRYATGGTVLACRLAL 145
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEK 208
+ GW++N+ GG+HH AD+G GFC YADI + H + Q ++M++DLD HQGNGHE
Sbjct: 146 QYGWSVNLSGGYHHAKADQGEGFCFYADIPVAAHVLWEQNPAMKIMVVDLDVHQGNGHEA 205
Query: 209 DFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFD 268
F D RV+I DM+N IYPRD EA +ID + V GT EYL L + LE A +
Sbjct: 206 VFKDDPRVFIFDMYNAEIYPRDKEAAEYIDFNLPVAYGTEDEEYLALLKKNLEPAIIQSN 265
Query: 269 PELVIYNAGTDILEGDPLGMLKV 291
P+L+IYNAGTDI + DPLG+L +
Sbjct: 266 PDLIIYNAGTDIYKDDPLGVLNI 288
>gi|327266298|ref|XP_003217943.1| PREDICTED: histone deacetylase 11-like [Anolis carolinensis]
Length = 286
Score = 257 bits (656), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 128/245 (52%), Positives = 159/245 (64%), Gaps = 24/245 (9%)
Query: 48 LGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPN 107
+G+EKLHPFDS KWG++ FL + + IV EA ++DLLVVH+ YL L+
Sbjct: 1 MGLEKLHPFDSGKWGKVINFLKEANLVTDDSIVRAQEAREDDLLVVHTRQYLNRLK---- 56
Query: 108 VSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADE 167
RKVL P R Q GGTI+A KLA ERGWAIN+GGGFHHCS D
Sbjct: 57 -------------------RKVLRPLRIQTGGTIMAGKLAIERGWAINIGGGFHHCSGDR 97
Query: 168 GGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGI 226
GGGFCAYADI+L I + F ++ +SR IIDLDAHQGNGHE+DF D RVYI+D++N I
Sbjct: 98 GGGFCAYADITLTIKFLFERMEGVSRATIIDLDAHQGNGHERDFMDDKRVYIMDVYNRYI 157
Query: 227 YPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPL 286
YP D A+R I +KVE+ GT EYL+K+ +E A +++IYNAGTDIL GDPL
Sbjct: 158 YPGDGFAKRAISRKVELEWGTEDAEYLQKVKAHVEAALDEVKSDIIIYNAGTDILYGDPL 217
Query: 287 GMLKV 291
G L +
Sbjct: 218 GGLAI 222
>gi|397511879|ref|XP_003826290.1| PREDICTED: histone deacetylase 11 isoform 2 [Pan paniscus]
Length = 297
Score = 257 bits (656), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 131/246 (53%), Positives = 164/246 (66%), Gaps = 25/246 (10%)
Query: 48 LGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPN 107
+G+EKLHPFD+ KWG++ FL E L + +VE EAS+EDLLVVH+ YL L+
Sbjct: 1 MGLEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEAREASEEDLLVVHTRRYLNELK---- 56
Query: 108 VSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGT-ILAAKLAKERGWAINVGGGFHHCSAD 166
RKVL P R Q GGT LA KLA ERGWAINVGGGFHHCS+D
Sbjct: 57 -------------------RKVLRPLRTQTGGTHKLAGKLAVERGWAINVGGGFHHCSSD 97
Query: 167 EGGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
GGGFCAYADI+L I + F ++ ISR IIDLDAHQGNGHE+DF D RVYI+D++N
Sbjct: 98 RGGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHERDFMDDKRVYIMDVYNRH 157
Query: 226 IYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDP 285
IYP D A++ I +KVE+ GT +EYL K++ ++ + P++V+YNAGTDILEGD
Sbjct: 158 IYPGDRFAKQAIRRKVELEWGTEDDEYLDKVERNIKKSLQEHLPDVVVYNAGTDILEGDR 217
Query: 286 LGMLKV 291
LG L +
Sbjct: 218 LGGLSI 223
>gi|221091523|ref|XP_002170251.1| PREDICTED: histone deacetylase 11-like, partial [Hydra
magnipapillata]
Length = 237
Score = 256 bits (654), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 126/232 (54%), Positives = 166/232 (71%), Gaps = 2/232 (0%)
Query: 24 SKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPL 83
S+LY DIP K+P+IY+ Y+ISF G+EKLHPFDS KWGRI + L E + K I++
Sbjct: 4 SQLYKDIPYEKVPIIYNSMYNISFFGMEKLHPFDSGKWGRIIKMLVDESVIKKEEIIDSE 63
Query: 84 EASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA 143
+ S+ +LL+VH++ YL+SL+SS V+ I E+ PVAL P+ +V R +L PF+ Q GGT+LA
Sbjct: 64 QISETELLLVHTKDYLQSLKSSFTVARITEIWPVALLPHFIVNRNLLIPFKFQTGGTVLA 123
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISR-VMIIDLDAHQ 202
AK+A ERGWAIN+GGGFHHCS+ EGGGFCAYADI+L I + + R +MIIDLDAHQ
Sbjct: 124 AKVAMERGWAINIGGGFHHCSSSEGGGFCAYADITLAIKILKNEFDAVRNIMIIDLDAHQ 183
Query: 203 GNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLK 254
GNGHE+DF D VYI+D +N IYP D A I + +++ T EYL+
Sbjct: 184 GNGHERDF-IDKSVYIMDAYNAYIYPSDSSAEAAISRIIKLKPYTEDKEYLE 234
>gi|194742864|ref|XP_001953920.1| GF18009 [Drosophila ananassae]
gi|190626957|gb|EDV42481.1| GF18009 [Drosophila ananassae]
Length = 341
Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 128/260 (49%), Positives = 172/260 (66%), Gaps = 4/260 (1%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
KLP++YS Y + F G+E+LHPFD++K I + L +E L+ E L +K+ L +
Sbjct: 31 KLPIVYSKKYAVRFAGLERLHPFDAAKGKHIQKILCTELNLNDGSFYESL--TKDQLRRI 88
Query: 94 HSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWA 153
H+ YL+SL S NV+ I EVP +A PN +Q L P R Q G+ILA KLA + GWA
Sbjct: 89 HTRDYLRSLDWSMNVACIAEVPVMAFVPNRFIQSSYLRPMRFQAAGSILAGKLALDYGWA 148
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQ--LNISRVMIIDLDAHQGNGHEKDFS 211
IN+GGGFHHC + GGGFC YADISL I F Q + R+MI+DLDAHQGNGHE+DF+
Sbjct: 149 INLGGGFHHCCSYRGGGFCPYADISLLIIRLFEQEPFRVRRIMIVDLDAHQGNGHERDFT 208
Query: 212 SDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPEL 271
+ + VYILDM+N +YP+D+ A++ I VE+ T YL++L L + F P++
Sbjct: 209 NVAAVYILDMYNAFVYPKDHAAKQSIRCAVELRHHTEDAFYLRQLSRCLMQSLAEFRPDV 268
Query: 272 VIYNAGTDILEGDPLGMLKV 291
VIYNAGTD+L+GDPLG L +
Sbjct: 269 VIYNAGTDVLKGDPLGNLSI 288
>gi|193207430|ref|NP_505699.3| Protein HDA-11 [Caenorhabditis elegans]
gi|157888565|emb|CAA94910.3| Protein HDA-11 [Caenorhabditis elegans]
Length = 334
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 121/270 (44%), Positives = 173/270 (64%), Gaps = 6/270 (2%)
Query: 28 FDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASK 87
F + ++ P++Y +Y+++ GIE LHPFDSSKW R+ L + +VEP +
Sbjct: 10 FSLKSYQRPIVYHSEYNVTAFGIEHLHPFDSSKWRRVITHLKEMNLITDETLVEPNLPTF 69
Query: 88 EDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLA 147
E+L VH YLKS+++ + I+E+P V P C+++ K+L+P R Q GGT+LAA LA
Sbjct: 70 EELTRVHDRKYLKSVRNPIKAAQIVEIPFVGCLPPCIIESKLLHPLRLQAGGTVLAANLA 129
Query: 148 KERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHE 207
+ GWAINVGGGFHH S GGGFC YADI++ I F + I+ +++DLDAHQGNGH
Sbjct: 130 LKHGWAINVGGGFHHASHSGGGGFCFYADITMAIFDLFDKKAIANAIVVDLDAHQGNGHA 189
Query: 208 KDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYL----KKLDEALEVA 263
+DF+ + V++ D+FNP +YP D EAR+FI++ V V TT YL K+L + L
Sbjct: 190 RDFADNPNVFVFDVFNPYVYPHDREARQFINRAVHVNGHTTDTSYLSELRKQLAQCLIDR 249
Query: 264 GHTFDP--ELVIYNAGTDILEGDPLGMLKV 291
T P + +++NAGTD L GDPLG +K+
Sbjct: 250 EKTTPPGFDFIMFNAGTDCLLGDPLGAMKL 279
>gi|194909322|ref|XP_001981923.1| GG12313 [Drosophila erecta]
gi|190656561|gb|EDV53793.1| GG12313 [Drosophila erecta]
Length = 332
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 129/260 (49%), Positives = 170/260 (65%), Gaps = 13/260 (5%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
KLP+++S +Y + F G+E+LHPFD++K I + L SE LD EP E +K+ L +
Sbjct: 31 KLPIVFSRNYAVRFGGLERLHPFDAAKGKHIHKLLCSELQLDDGSFYEPTELTKDQLRRI 90
Query: 94 HSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWA 153
H+ YLKSL+ S NV+ I EVP R L P R Q G+ILA +LA + GWA
Sbjct: 91 HTRDYLKSLRWSMNVACIAEVP-----------RSYLRPMRFQAAGSILAGRLALDYGWA 139
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQ--LNISRVMIIDLDAHQGNGHEKDFS 211
IN+GGGFHHC + GGGFC YADISL I F Q + R+MI+DLDAHQGNGHE+DF+
Sbjct: 140 INLGGGFHHCCSYRGGGFCPYADISLLIVRLFEQEPFRVRRIMIVDLDAHQGNGHERDFN 199
Query: 212 SDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPEL 271
+ + VYILDM+N +YPRD+ A+ I VE+ + T YL++L L + F P++
Sbjct: 200 NVAAVYILDMYNAFVYPRDHVAKESIRCAVELRNHTEDAFYLRQLKRCLMQSLAEFRPDV 259
Query: 272 VIYNAGTDILEGDPLGMLKV 291
VIYNAGTD+LEGDPLG L +
Sbjct: 260 VIYNAGTDVLEGDPLGNLSI 279
>gi|119584563|gb|EAW64159.1| histone deacetylase 11, isoform CRA_c [Homo sapiens]
Length = 193
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 118/193 (61%), Positives = 143/193 (74%), Gaps = 1/193 (0%)
Query: 48 LGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPN 107
+G+EKLHPFD+ KWG++ FL E L + +VE EAS+EDLLVVH+ YL L+ S
Sbjct: 1 MGLEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEAREASEEDLLVVHTRRYLNELKWSFA 60
Query: 108 VSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADE 167
V+ I E+PPV PN LVQRKVL P R Q GGTI+A KLA ERGWAINVGGGFHHCS+D
Sbjct: 61 VATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIMAGKLAVERGWAINVGGGFHHCSSDR 120
Query: 168 GGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGI 226
GGGFCAYADI+L I + F ++ ISR IIDLDAHQGNGHE+DF D RVYI+D++N I
Sbjct: 121 GGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHERDFMDDKRVYIMDVYNRHI 180
Query: 227 YPRDYEARRFIDQ 239
YP D A++ I +
Sbjct: 181 YPGDRFAKQAIRR 193
>gi|195158946|ref|XP_002020344.1| GL13561 [Drosophila persimilis]
gi|198449329|ref|XP_001357545.2| GA16023 [Drosophila pseudoobscura pseudoobscura]
gi|194117113|gb|EDW39156.1| GL13561 [Drosophila persimilis]
gi|198130558|gb|EAL26679.2| GA16023 [Drosophila pseudoobscura pseudoobscura]
Length = 331
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 127/260 (48%), Positives = 173/260 (66%), Gaps = 2/260 (0%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
KLP++YS Y + F G+E+LHPF+++K I + L +E L + EP E +K L +
Sbjct: 19 KLPIVYSKSYAVRFHGLERLHPFNAAKGKHIHKALCAELSLVEGSFYEPEELTKHQLRRI 78
Query: 94 HSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWA 153
H+ YL+SL+ S NV+ I EV +A PN +Q+ L P R Q G+ILA KLA + GWA
Sbjct: 79 HTREYLRSLRWSLNVARIAEVSLMAFVPNKYLQQAYLRPMRFQAAGSILAGKLALDYGWA 138
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQ--LNISRVMIIDLDAHQGNGHEKDFS 211
IN+GGGFHHC ++ GGGFC YADISL I F Q + R+MI+DLDAHQGNGHE+DF+
Sbjct: 139 INLGGGFHHCCSNRGGGFCPYADISLLIVRLFEQEPCRVRRIMIVDLDAHQGNGHERDFN 198
Query: 212 SDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPEL 271
+ V+ILD++N IYPRD+ A+ I VE+ + T YL++L L + F P++
Sbjct: 199 NWETVFILDIYNAFIYPRDHAAKLSIRCGVELQNQTEDAYYLRQLSRCLMQSLADFRPDV 258
Query: 272 VIYNAGTDILEGDPLGMLKV 291
VIYNAGTD+L+GDPLG L +
Sbjct: 259 VIYNAGTDVLKGDPLGNLDI 278
>gi|308478506|ref|XP_003101464.1| CRE-HDAC-11 protein [Caenorhabditis remanei]
gi|308263110|gb|EFP07063.1| CRE-HDAC-11 protein [Caenorhabditis remanei]
Length = 336
Score = 251 bits (641), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 117/262 (44%), Positives = 173/262 (66%), Gaps = 6/262 (2%)
Query: 36 PLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHS 95
P++Y +Y++S GIE LHPFD+SKW R+ +L + + +VEP + E+L+ VH
Sbjct: 18 PIVYHSEYNVSAFGIEHLHPFDTSKWRRVICYLKEMNLITDSTLVEPNLPTFEELVRVHD 77
Query: 96 ESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAIN 155
YLKS+++ + I+E+P V P C+++ K+L+P R Q GG++LAA LA + GWAIN
Sbjct: 78 RKYLKSVRNPLKAAQIVEIPLVGCLPPCIIENKLLHPLRLQAGGSVLAANLALKYGWAIN 137
Query: 156 VGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSR 215
VGGGFHH S +GGGFC YADI++ I F + IS+ +++DLDAHQGNGH +DF+ +
Sbjct: 138 VGGGFHHASHSDGGGFCFYADITMAICDLFDKKAISQAIVVDLDAHQGNGHARDFADNKD 197
Query: 216 VYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVA---GHTFDP--- 269
V++ D+FNP +YP D EAR+FI++ V V TT Y+ +L + L +P
Sbjct: 198 VFVFDVFNPNVYPHDREARQFINKAVHVDGHTTDTSYISELRKQLTQCIDDRERLNPSGF 257
Query: 270 ELVIYNAGTDILEGDPLGMLKV 291
+ +++NAGTD L GDPLG +K+
Sbjct: 258 DFIMFNAGTDCLFGDPLGAMKL 279
>gi|119584573|gb|EAW64169.1| histone deacetylase 11, isoform CRA_l [Homo sapiens]
Length = 208
Score = 249 bits (635), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 118/208 (56%), Positives = 148/208 (71%), Gaps = 1/208 (0%)
Query: 1 MSSSSSPSVTTDAETLKRNRILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSK 60
M SS + + D R+ +++LY +P + P++YSP Y+I+F+G+EKLHPFD+ K
Sbjct: 1 MGRVSSAAGSGDPRPPPWLRLHTTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGK 60
Query: 61 WGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALF 120
WG++ FL E L + +VE EAS+EDLLVVH+ YL L+ S V+ I E+PPV
Sbjct: 61 WGKVINFLKEEKLLSDSMLVEAREASEEDLLVVHTRRYLNELKWSFAVATITEIPPVIFL 120
Query: 121 PNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLC 180
PN LVQRKVL P R Q GGTI+A KLA ERGWAINVGGGFHHCS+D GGGFCAYADI+L
Sbjct: 121 PNFLVQRKVLRPLRTQTGGTIMAGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLA 180
Query: 181 IHYAFVQL-NISRVMIIDLDAHQGNGHE 207
I + F ++ ISR IIDLDAHQGNGHE
Sbjct: 181 IKFLFERVEGISRATIIDLDAHQGNGHE 208
>gi|170030566|ref|XP_001843159.1| histone deacetylase 11 [Culex quinquefasciatus]
gi|167867835|gb|EDS31218.1| histone deacetylase 11 [Culex quinquefasciatus]
Length = 350
Score = 248 bits (632), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 126/266 (47%), Positives = 172/266 (64%), Gaps = 8/266 (3%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIV-EPLEASKEDLLV 92
KLP++Y +Y + F G+++LHPFD++K G I + L + + + V +P E + +LL
Sbjct: 29 KLPIVYRKEYGVRFCGLQRLHPFDAAKGGNIFRLLKAGHLIHSDDEVHQPKEITTAELLD 88
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE--- 149
VH++ Y+ SL+ S NV+ I E+PP+ PN VQR L P R Q G++LAAK A E
Sbjct: 89 VHTKRYIGSLKWSLNVAKIAEIPPLLFVPNYFVQRSYLRPMRFQTAGSLLAAKRALESTT 148
Query: 150 -RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQ-LNISRVMIIDLDAHQGNGHE 207
WAIN+GGGFHHCSAD GGGFC YADI+L + I R+MI+DLDAHQGNG+
Sbjct: 149 GHQWAINLGGGFHHCSADRGGGFCPYADITLTVRMLLGSGRGIERIMIVDLDAHQGNGYA 208
Query: 208 KDFSSDS--RVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGH 265
+D + V+I+DM+N IYPRD EA+ I + VE+ T EYL+KL + L +
Sbjct: 209 RDLLEERGRTVFIMDMYNYRIYPRDQEAKLAISRAVELKPHTEDEEYLRKLRDGLSRSMD 268
Query: 266 TFDPELVIYNAGTDILEGDPLGMLKV 291
F P VIYNAGTD+L+GDPLG+L +
Sbjct: 269 QFRPNFVIYNAGTDVLKGDPLGVLDI 294
>gi|335299481|ref|XP_003132448.2| PREDICTED: histone deacetylase 11-like [Sus scrofa]
Length = 296
Score = 247 bits (631), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 127/245 (51%), Positives = 160/245 (65%), Gaps = 24/245 (9%)
Query: 48 LGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPN 107
+G+EKLHPFD+ KWG++ FL E L + +VE EAS EDLLVVH+ YL L+
Sbjct: 1 MGLEKLHPFDAGKWGKVISFLKEEKLLTDSMLVEAREASDEDLLVVHTRRYLNELK---- 56
Query: 108 VSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADE 167
V + P + GG+ILA KLA ERGWAINVGGGFHHCS+D
Sbjct: 57 VQGLGAASP-------------------EKGGSILAGKLAVERGWAINVGGGFHHCSSDR 97
Query: 168 GGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGI 226
GGGFCAYADI+L I + F ++ ISR IIDLDAHQGNGHE+DF D RVYI+D++N I
Sbjct: 98 GGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHERDFMGDKRVYIMDVYNRHI 157
Query: 227 YPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPL 286
YP D A++ I +KVE+ T +EYL K++ LE A P++V+YNAGTD+LEGD L
Sbjct: 158 YPGDRFAKQAIRRKVELEWATEDDEYLTKVERNLEKALQEHRPDVVVYNAGTDVLEGDRL 217
Query: 287 GMLKV 291
G L +
Sbjct: 218 GGLSI 222
>gi|217072904|gb|ACJ84812.1| unknown [Medicago truncatula]
Length = 201
Score = 244 bits (622), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 112/140 (80%), Positives = 126/140 (90%)
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
INVGGGFHHCSA+ GGGFCAYADISLCIH+AFVQLNISRV+IIDLDAHQGNGHE DF+
Sbjct: 1 MGINVGGGFHHCSAENGGGFCAYADISLCIHFAFVQLNISRVIIIDLDAHQGNGHEMDFA 60
Query: 212 SDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPEL 271
D+RVYILDM+NPGIYP D+EAR +I+QKV+V SGT T EYL KLDEALEVAG F+PEL
Sbjct: 61 DDNRVYILDMYNPGIYPLDHEARSYINQKVDVKSGTRTEEYLLKLDEALEVAGRRFNPEL 120
Query: 272 VIYNAGTDILEGDPLGMLKV 291
++YNAGTDILEGDPLG LK+
Sbjct: 121 LVYNAGTDILEGDPLGRLKI 140
>gi|307106657|gb|EFN54902.1| hypothetical protein CHLNCDRAFT_23994, partial [Chlorella
variabilis]
Length = 326
Score = 243 bits (621), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 125/266 (46%), Positives = 168/266 (63%), Gaps = 10/266 (3%)
Query: 36 PLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHS 95
P++YSP Y+ISF G+E+LHPFDS K+ + L G L +V EA+ E L VH+
Sbjct: 1 PVLYSPAYNISFYGVERLHPFDSKKFQHVLSILERGGVLQVGQLVRAHEATHEILQEVHT 60
Query: 96 ESYLKSLQSSPNV-----SIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKER 150
E+YL L +S + + E+ P+A P L++RKVL P GGT++AA LA ER
Sbjct: 61 EAYLNKLNTSSFMVAQASRWVTELVPLAFLPPFLLRRKVLRPMATMAGGTMMAAALAMER 120
Query: 151 GWAINVGGGFHHCSADEGGGFCAYADISLCIH--YAFVQLNISRVMIIDLDAHQGNGHEK 208
GWAIN+GGG HH S D+GGG+C YADI L + A + RVM++DLD HQGNG E+
Sbjct: 121 GWAINLGGGMHHASHDQGGGWCPYADIHLAMRRLRAASGGGVRRVMVVDLDVHQGNGVER 180
Query: 209 ---DFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGH 265
F + +I+D++N YP D EA++ ID + E++ GT EYL+ + AL A
Sbjct: 181 CKQHFGEEGETFIVDVYNRRAYPWDAEAKQAIDVQRELLPGTGDGEYLEAVVSALRQAFS 240
Query: 266 TFDPELVIYNAGTDILEGDPLGMLKV 291
F P+L+IYNAGTDILEGDPLG+L V
Sbjct: 241 EFQPDLLIYNAGTDILEGDPLGLLSV 266
>gi|354465542|ref|XP_003495238.1| PREDICTED: histone deacetylase 11-like [Cricetulus griseus]
Length = 443
Score = 240 bits (612), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 125/269 (46%), Positives = 162/269 (60%), Gaps = 42/269 (15%)
Query: 23 SSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEP 82
+++LY +P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L +VE
Sbjct: 143 ATQLYQHVPEKRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDGMLVEA 202
Query: 83 LEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTIL 142
EAS+EDLLVVH+ YL L+ S V+ I E+PPV PN LVQRKVL P R Q GGTI+
Sbjct: 203 REASEEDLLVVHTRRYLNELKWSFVVATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIM 262
Query: 143 AAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQ 202
A KLA ERGWAINVGGGFHHCS+D GGGFCAYADI+L I V LN+
Sbjct: 263 AGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIK---VCLNLP----------- 308
Query: 203 GNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEV 262
Y + I +KVE+ GT EYL+K++ +
Sbjct: 309 ----------------------------YLTSKAIRRKVELEWGTEDEEYLEKVERNVRR 340
Query: 263 AGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ P++V+YNAGTD+LEGD LG L +
Sbjct: 341 SLQEHLPDVVVYNAGTDVLEGDRLGGLSI 369
>gi|344241605|gb|EGV97708.1| Histone deacetylase 11 [Cricetulus griseus]
Length = 301
Score = 236 bits (602), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 124/269 (46%), Positives = 160/269 (59%), Gaps = 44/269 (16%)
Query: 23 SSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEP 82
+++LY +P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L +VE
Sbjct: 3 ATQLYQHVPEKRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDGMLVEA 62
Query: 83 LEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTIL 142
EAS+EDLLVVH+ YL L+ S V+ I E+PPV PN LVQRKVL P R Q GGTI+
Sbjct: 63 REASEEDLLVVHTRRYLNELKWSFVVATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIM 122
Query: 143 AAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQ 202
A KLA ERGWAINVGGGFHHCS+D GGGFCAYADI+L I
Sbjct: 123 AGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAI--------------------- 161
Query: 203 GNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEV 262
+V I F I +KVE+ GT EYL+K++ +
Sbjct: 162 ------------KVVICVSFPEA-----------IRRKVELEWGTEDEEYLEKVERNVRR 198
Query: 263 AGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ P++V+YNAGTD+LEGD LG L +
Sbjct: 199 SLQEHLPDVVVYNAGTDVLEGDRLGGLSI 227
>gi|340381672|ref|XP_003389345.1| PREDICTED: histone deacetylase 11-like, partial [Amphimedon
queenslandica]
Length = 252
Score = 233 bits (595), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 107/189 (56%), Positives = 141/189 (74%), Gaps = 1/189 (0%)
Query: 104 SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHC 163
SS NV++++EVPP+A+ PN +VQ K+L PFR Q GGTILA KLA ERGWAIN+GGGFHHC
Sbjct: 1 SSTNVAMVVEVPPLAIVPNYIVQNKMLRPFRYQTGGTILAGKLAMERGWAINIGGGFHHC 60
Query: 164 SADEGGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMF 222
+ EGGGFCAYADI+L I + F ++ + +VMI+D DAHQGNGHE+DF D +VYI+DM+
Sbjct: 61 CSGEGGGFCAYADITLSIRFLFQRVPGVQKVMIVDFDAHQGNGHERDFMDDDKVYIMDMY 120
Query: 223 NPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILE 282
N IYP D +A+ I+ K+E+ T YL+ + L A F P++V+YNAGTD+L
Sbjct: 121 NRWIYPNDIKAKSAINMKIELDVHTGDETYLRHIRRKLPEALDEFHPDIVVYNAGTDVLM 180
Query: 283 GDPLGMLKV 291
GDPLG+L +
Sbjct: 181 GDPLGILDI 189
>gi|268558276|ref|XP_002637128.1| Hypothetical protein CBG09630 [Caenorhabditis briggsae]
Length = 326
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 114/262 (43%), Positives = 164/262 (62%), Gaps = 16/262 (6%)
Query: 36 PLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHS 95
P++Y +Y++S GIE LHPFDSSKW R+ L + VEP + E+L VH
Sbjct: 18 PIVYHSEYNVSAFGIEHLHPFDSSKWKRVIAHLKDMNLITDATTVEPSLPTFEELTRVHD 77
Query: 96 ESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAIN 155
YLKS+++ + I+E+P V P C+++ GG++LAA LA + GWAIN
Sbjct: 78 RKYLKSVRNPLKAAQIVEIPLVGCLPPCVIE----------TGGSVLAANLALKHGWAIN 127
Query: 156 VGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSR 215
VGGGFHH S +GGGFC YADI++ I F + I+ +++D+DAHQGNGH +DF+++
Sbjct: 128 VGGGFHHASYSDGGGFCFYADITMAICDLFDKKAITNAIVVDVDAHQGNGHARDFANNEN 187
Query: 216 VYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYL----KKLDEALEVAGHTFDP-- 269
V++ D+FNP +YP D EAR+FI++ V V S TT Y+ K+L + LE + P
Sbjct: 188 VFVFDVFNPYVYPHDREARQFINKAVHVNSHTTDTSYISELRKQLTQCLENRQNLTPPGF 247
Query: 270 ELVIYNAGTDILEGDPLGMLKV 291
+ ++YNAGTD L GDPLG + +
Sbjct: 248 DFILYNAGTDCLFGDPLGAMNL 269
>gi|384248980|gb|EIE22463.1| hypothetical protein COCSUDRAFT_16559 [Coccomyxa subellipsoidea
C-169]
Length = 370
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 115/263 (43%), Positives = 165/263 (62%), Gaps = 5/263 (1%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
KLP+ Y+ Y+I FLG+E+ HPFDS K+G++ L + G L+ + +V+P EA+++ L V
Sbjct: 41 KLPIAYADAYNIGFLGLERFHPFDSRKFGKVVNNLDASGILNPDQLVQPPEATQQVLRDV 100
Query: 94 HSESYLKSLQ-SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
HSE YL S+ SS ++ I E+ + PN +VQ ++ P R VGGT+LA +A E GW
Sbjct: 101 HSEEYLLSINTSSSKMAEITEIAAIGFLPNSVVQHRLNRPMRIHVGGTMLAVGMAMEWGW 160
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLN--ISRVMIIDLDAHQGNGHEKD- 209
AIN+GGG HH S D GGG+C Y D +L + + + + M+IDLD HQGNGH +
Sbjct: 161 AINLGGGMHHASVDNGGGWCVYDDWTLALRKLRRETGNVVQKAMLIDLDVHQGNGHARTK 220
Query: 210 -FSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFD 268
D +YILD++N ++P D A+ I+ ++ + SGT EYL L + L A F
Sbjct: 221 LHFGDKDLYILDLYNADLWPWDTTAKAAINCELPMKSGTGDEEYLSMLSKGLHTAFQEFA 280
Query: 269 PELVIYNAGTDILEGDPLGMLKV 291
P++++YNAGTDIL GDPLG V
Sbjct: 281 PDIILYNAGTDILRGDPLGRCSV 303
>gi|159478703|ref|XP_001697440.1| histone deacetylase [Chlamydomonas reinhardtii]
gi|158274319|gb|EDP00102.1| histone deacetylase [Chlamydomonas reinhardtii]
Length = 311
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 123/256 (48%), Positives = 164/256 (64%), Gaps = 5/256 (1%)
Query: 41 PDYDISFLGIEKLHPFDSSKWGRICQFLSSEGF-LDKNCIVEPLEASKEDLLVVHSESYL 99
P Y+ISF GIEKLHPFD+ K+ ++ + L +G L +V P EA+ E L VH+ YL
Sbjct: 1 PQYNISFFGIEKLHPFDAGKFAKVVKALKRDGVVLGDAQLVTPREATPEMLSDVHTADYL 60
Query: 100 KSLQSSP-NVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGG 158
+ + V + E+ +A+ PN L+Q +V+ P R VGGT+LA LA ERGWA+N+GG
Sbjct: 61 HRIHNHNFTVVQVTELAALAMLPNKLLQWRVVAPMRMHVGGTMLALGLALERGWAVNIGG 120
Query: 159 GFHHCSADEGGGFCAYADISLCIHYAFVQLNIS--RVMIIDLDAHQGNGHEKDFSSDSRV 216
G HH SAD G G+C + DI L A +V++IDLDAHQGNG E+ D ++
Sbjct: 121 GMHHASADRGMGWCPFDDIMLGAAAAGDGAGAGGLKVLVIDLDAHQGNGVERLALGDGQL 180
Query: 217 YILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTF-DPELVIYN 275
YILDM+N G++PRD EA+ ID +VE+ SGT + YL +L ALE A P+LV+YN
Sbjct: 181 YILDMYNAGVFPRDDEAKAGIDIRVELKSGTEDDVYLNRLRAALERAALVLPRPDLVVYN 240
Query: 276 AGTDILEGDPLGMLKV 291
AGTD+L GDPLG L V
Sbjct: 241 AGTDVLAGDPLGRLGV 256
>gi|312091972|ref|XP_003147172.1| histone deacetylase 11 [Loa loa]
Length = 317
Score = 225 bits (574), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 117/254 (46%), Positives = 146/254 (57%), Gaps = 42/254 (16%)
Query: 80 VEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV-- 137
+ P EAS +DL VVHS +YL SL+ V+ ++E+ PVAL P C++ + +L P R
Sbjct: 8 IRPSEASMDDLRVVHSSTYLSSLRCPCYVAKMVEITPVALLPPCIINKVLLKPLRYHTDK 67
Query: 138 ----------------------------------------GGTILAAKLAKERGWAINVG 157
GGT+LAAKLA GWAIN+G
Sbjct: 68 LRTDCVKCIGAYSLKSALCCNAALFEVAQVDKCIFLSSFEGGTVLAAKLALTSGWAINIG 127
Query: 158 GGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVY 217
GGFHH S +GGGFC YADI+L + + F IS+ +I+DLDAHQGNGHE DFS DSRVY
Sbjct: 128 GGFHHASRSKGGGFCIYADITLALTFLFSSQLISKAVIVDLDAHQGNGHENDFSGDSRVY 187
Query: 218 ILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAG 277
ILDMFN IYP D ARR I + V + GT EYL L LE F P++++YNAG
Sbjct: 188 ILDMFNSRIYPYDLRARRAIKRSVHLHVGTQDAEYLSLLSSNLEDVLSEFRPDIIVYNAG 247
Query: 278 TDILEGDPLGMLKV 291
TD L GDPLG+L +
Sbjct: 248 TDCLRGDPLGLLSI 261
>gi|355694227|gb|AER99599.1| Histone deacetylase 11 [Mustela putorius furo]
Length = 185
Score = 225 bits (574), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 109/179 (60%), Positives = 132/179 (73%), Gaps = 1/179 (0%)
Query: 86 SKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK 145
S EDLLVVH+ YL L+ S V+ I E+PPV PN LVQRKVL P R Q GGTI+A K
Sbjct: 1 SDEDLLVVHTRRYLNELKWSFAVATITEIPPVIFLPNFLVQRKVLKPLRTQTGGTIMAGK 60
Query: 146 LAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAHQGN 204
LA ERGWAINVGGGFHHCS+D GGGFCAYADI+L I + F ++ ISR I+DLDAHQGN
Sbjct: 61 LAMERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIVDLDAHQGN 120
Query: 205 GHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVA 263
GHE+DF D RVYI+D++N IYP D A++ I +KVE+ GT +EYL K++ L+ A
Sbjct: 121 GHERDFMGDKRVYIMDVYNRHIYPGDRFAKQAIRRKVELEWGTEDDEYLDKVERNLQKA 179
>gi|302837171|ref|XP_002950145.1| hypothetical protein VOLCADRAFT_59975 [Volvox carteri f.
nagariensis]
gi|300264618|gb|EFJ48813.1| hypothetical protein VOLCADRAFT_59975 [Volvox carteri f.
nagariensis]
Length = 428
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 121/261 (46%), Positives = 163/261 (62%), Gaps = 10/261 (3%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
+LP++Y P Y+ISF G+EKLHPFDS K+G++ L + L + V+P EAS E L V
Sbjct: 54 QLPVVYHPSYNISFFGVEKLHPFDSCKYGKVMSALKKQHVLREGQTVQPREASLEVLADV 113
Query: 94 HSESYLKSLQSSPNVSII--IEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
H++ YL + N +I+ E+ ++L PN L+Q +++ P + VGGT+LA LA ERG
Sbjct: 114 HTQDYLYRIHYH-NFTIVQVTELAALSLLPNKLLQWRIVAPMKLHVGGTMLATGLALERG 172
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
WAIN+GGG HH S+ G G+C + DI L + V+ IDLDAHQGNG E+DF
Sbjct: 173 WAINIGGGMHHASSSRGMGWCPFDDIVLAVRRVRKAAGRLVVLYIDLDAHQGNGVERDF- 231
Query: 212 SDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTF-DPE 270
YI+D +N I+P D EA+ ID VE+ G +E L +L AL VA T P+
Sbjct: 232 -----YIIDFYNARIFPLDDEAKPAIDIPVELRFGADDDEILGRLHAALAVAARTLPRPD 286
Query: 271 LVIYNAGTDILEGDPLGMLKV 291
LVIYNAGTD+L GDPLG L +
Sbjct: 287 LVIYNAGTDVLAGDPLGRLGM 307
>gi|119584565|gb|EAW64161.1| histone deacetylase 11, isoform CRA_e [Homo sapiens]
Length = 190
Score = 214 bits (545), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 96/159 (60%), Positives = 120/159 (75%)
Query: 23 SSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEP 82
+++LY +P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L + +VE
Sbjct: 4 TTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEA 63
Query: 83 LEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTIL 142
EAS+EDLLVVH+ YL L+ S V+ I E+PPV PN LVQRKVL P R Q GGTI+
Sbjct: 64 REASEEDLLVVHTRRYLNELKWSFAVATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIM 123
Query: 143 AAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCI 181
A KLA ERGWAINVGGGFHHCS+D GGGFCAYADI+L I
Sbjct: 124 AGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAI 162
>gi|357614603|gb|EHJ69167.1| putative histone deacetylase 11-like protein [Danaus plexippus]
Length = 242
Score = 213 bits (543), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 101/182 (55%), Positives = 129/182 (70%)
Query: 110 IIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGG 169
+I EVP +A PN LVQ+ L P R Q GGTILA KLA ERGWAIN+GGGFHHCSA +GG
Sbjct: 1 MIAEVPVIACVPNFLVQKAYLKPMRLQTGGTILAGKLALERGWAINIGGGFHHCSAGKGG 60
Query: 170 GFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPR 229
GFCAYADI+L I + + MI+DLDAHQGNG++ DF VYI+DM+N IYPR
Sbjct: 61 GFCAYADITLLIKNLVLHRGVQNTMIVDLDAHQGNGYQHDFLGIPEVYIMDMYNRHIYPR 120
Query: 230 DYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGML 289
D EA+R I +K+E+ + EY+ KL + L A F P++++YNAGTDIL+ DPLG +
Sbjct: 121 DEEAKRAIRRKIELGNKVEDLEYMIKLRKNLREALKEFKPDILVYNAGTDILDSDPLGHM 180
Query: 290 KV 291
++
Sbjct: 181 RI 182
>gi|403332831|gb|EJY65466.1| Histone deacetylase 11 [Oxytricha trifallax]
Length = 381
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 110/258 (42%), Positives = 154/258 (59%), Gaps = 2/258 (0%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFL-DKNCIVEPLEASKEDLLVV 93
P++YSP Y+I+ G+EK+HPFDS K+ R+ + L + + D+ I P ++E LL
Sbjct: 68 FPIVYSPKYNITAFGLEKIHPFDSCKYQRVFESLRKKKVINDQTQIHSPSIPTREFLLEK 127
Query: 94 HSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWA 153
S YL LQ S + +EVP + P+ ++ +VL P + G++ A+ +A ++GWA
Sbjct: 128 MSAWYLFKLQYSIYICKCLEVP-LFFLPSWFLRFRVLNPMLRATQGSVDASCIALQQGWA 186
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSD 213
IN+ GG+HH S GGGFC Y DI+ +H I+RVMIIDLDAHQGNGHE+DF D
Sbjct: 187 INLAGGYHHASCTCGGGFCIYPDITFIVHNVKKYHGINRVMIIDLDAHQGNGHERDFLRD 246
Query: 214 SRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVI 273
V+I+D +NP IYP D A I ++ + +L KL + A F PE VI
Sbjct: 247 PDVHIVDAYNPNIYPGDDFAETAIKTRIPITHYDDDESFLHKLKSQITEAYQQFRPEFVI 306
Query: 274 YNAGTDILEGDPLGMLKV 291
YNAGTD +E DPLG L +
Sbjct: 307 YNAGTDCMENDPLGQLNI 324
>gi|119584561|gb|EAW64157.1| histone deacetylase 11, isoform CRA_a [Homo sapiens]
Length = 165
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 98/156 (62%), Positives = 116/156 (74%), Gaps = 1/156 (0%)
Query: 48 LGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPN 107
+G+EKLHPFD+ KWG++ FL E L + +VE EAS+EDLLVVH+ YL L+ S
Sbjct: 1 MGLEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEAREASEEDLLVVHTRRYLNELKWSFA 60
Query: 108 VSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADE 167
V+ I E+PPV PN LVQRKVL P R Q GGTI+A KLA ERGWAINVGGGFHHCS+D
Sbjct: 61 VATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIMAGKLAVERGWAINVGGGFHHCSSDR 120
Query: 168 GGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAHQ 202
GGGFCAYADI+L I + F ++ ISR IIDLDAHQ
Sbjct: 121 GGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQ 156
>gi|341892614|gb|EGT48549.1| CBN-HDAC-11 protein [Caenorhabditis brenneri]
gi|341899537|gb|EGT55472.1| hypothetical protein CAEBREN_32506 [Caenorhabditis brenneri]
Length = 284
Score = 207 bits (528), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 100/221 (45%), Positives = 146/221 (66%), Gaps = 10/221 (4%)
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVG 138
+VEP + E+L VH YLKS+++ + I+E+P V P C+++ K+L+P R Q G
Sbjct: 9 LVEPNLPTFEELSRVHDRKYLKSVRNPLKAAQIVEIPLVGCLPPCIIETKLLHPLRLQAG 68
Query: 139 GTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDL 198
G++LAA LA + GWAINVGGGFHH S +GGGFC YADI++ I F + I+ +++D+
Sbjct: 69 GSVLAANLALKHGWAINVGGGFHHASHSDGGGFCFYADITMAILDLFDKKAITNAIVVDV 128
Query: 199 DAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDE 258
DAHQGNGH +DF+++ V++ D+FNP +YP D EAR+FI++ V V TT YL +L +
Sbjct: 129 DAHQGNGHARDFANNPNVFVFDVFNPYVYPHDREARQFINKAVHVNGHTTDTSYLSELRK 188
Query: 259 AL--------EVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
L ++ FD +++NAGTD L GDPLG +K+
Sbjct: 189 QLTKCLADREKLTPPGFD--FMMFNAGTDSLSGDPLGAMKL 227
>gi|443475316|ref|ZP_21065269.1| Histone deacetylase [Pseudanabaena biceps PCC 7429]
gi|443019838|gb|ELS33872.1| Histone deacetylase [Pseudanabaena biceps PCC 7429]
Length = 326
Score = 207 bits (526), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 118/270 (43%), Positives = 162/270 (60%), Gaps = 8/270 (2%)
Query: 29 DIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDK---NCIVEPLEA 85
D I + ++YSP+YDI FLG+EKLHPFDS K+GR + L+ F D+ N + A
Sbjct: 6 DSIIIRPKVVYSPNYDIKFLGLEKLHPFDSCKYGRAWRVLADR-FGDRLIANSLAPVAPA 64
Query: 86 SKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK 145
E L +VH+ YLK+LQ S V+ +E+ + P ++ +VL P R GT++A++
Sbjct: 65 PTEILQLVHTTDYLKNLQRSHFVAQSLEMDSLGFLPIGILDSRVLQPMRLATMGTVMASE 124
Query: 146 LAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNIS---RVMIIDLDAHQ 202
A E G AIN+ GG+HH SA+ G GFC Y+DI++ I I+ RV IIDLDAHQ
Sbjct: 125 AALEFGVAINLSGGYHHASAERGEGFCIYSDIAIAISLLRQSQKINAEDRVAIIDLDAHQ 184
Query: 203 GNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEV 262
GNG + F D ++ILDM+N IYP D A+ +D + ++SGT + YL L + L
Sbjct: 185 GNGLARIFYEDPSIHILDMYNQQIYPNDTYAKERVDWAIPLLSGTKDDRYLGLLKDRLPA 244
Query: 263 AGHTFD-PELVIYNAGTDILEGDPLGMLKV 291
D P++V YNAGTDI E D LG LKV
Sbjct: 245 FLQESDLPKIVFYNAGTDIYERDLLGGLKV 274
>gi|145509340|ref|XP_001440611.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124407834|emb|CAK73214.1| unnamed protein product [Paramecium tetraurelia]
Length = 366
Score = 200 bits (508), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 112/259 (43%), Positives = 158/259 (61%), Gaps = 14/259 (5%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWG----RICQFLSSEGFLDKNCIVEPLEASKED 89
++P++Y +Y+I+ GIEK HPFDS K+G +I Q + ++ F P S+
Sbjct: 65 EIPIVYHENYNITACGIEKWHPFDSCKYGNVYRQIRQKVKAQHF-------TPSMLSRGT 117
Query: 90 LLVV-HSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAK 148
LL + S YL + S VS +IE+P V P ++ +L P G+I AAKLA
Sbjct: 118 LLYLGMSRWYLLKMCYSAYVSTLIELP-VFFLPGAFLRSSLLDPMLLATSGSIYAAKLAI 176
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEK 208
E+GWAIN+ GG+HH S + GGGFC Y DI+L ++Y N+++++I+DLDAHQGNG+E+
Sbjct: 177 EKGWAINLSGGYHHASLNGGGGFCIYPDITLVVNYLKKCQNLNKIVIVDLDAHQGNGYER 236
Query: 209 DFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFD 268
DF DS VYI+D +N IYP D+EA + I+ V TT +Y+ L LE D
Sbjct: 237 DFLQDSSVYIIDFYNSYIYPGDHEAEQAINCFEHVDKNTTDEQYIMTLQRNLEKHLKD-D 295
Query: 269 PELVIYNAGTDILEGDPLG 287
E +IYNAG+DI+ GDPLG
Sbjct: 296 MEFIIYNAGSDIMGGDPLG 314
>gi|320164043|gb|EFW40942.1| histone deacetylase 11 [Capsaspora owczarzaki ATCC 30864]
Length = 372
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 107/232 (46%), Positives = 142/232 (61%), Gaps = 9/232 (3%)
Query: 28 FDIPIFKLPLIYSPDYDISFLGIEKL---HPFDSSKWGRICQFLSS----EGFLDKNCIV 80
F +P LP+ YS Y++ F GIEK+ HPFD++K+ + + L + F +
Sbjct: 78 FQLPAAMLPVFYSEAYNMGFGGIEKVLSPHPFDATKYRGVFKHLRAGPLASAFAPARIMA 137
Query: 81 EPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGT 140
P AS +DLL+ HSE YL+SL+SS V+ I EV +A+ P +V ++ P R GT
Sbjct: 138 PPAVASDQDLLIAHSEEYLRSLKSSTTVAHIAEVITLAVLPIFMVNYGIVTPQRTMTSGT 197
Query: 141 ILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDA 200
AAK A + GWAINVGGGFHH S +EGGGFC +ADIS I ++ + R MI+DLDA
Sbjct: 198 AFAAKAAMQAGWAINVGGGFHHASCNEGGGFCIFADISFAIKL-LMREGLQRAMIVDLDA 256
Query: 201 HQGNGHEKDFSSDS-RVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNE 251
HQGNGHE DF+ D RVYILD++N IYP D +A+ + V V SG E
Sbjct: 257 HQGNGHENDFAQDKDRVYILDVYNRDIYPGDRKAKSGMSLNVPVSSGIADAE 308
>gi|145497186|ref|XP_001434582.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124401709|emb|CAK67185.1| unnamed protein product [Paramecium tetraurelia]
Length = 366
Score = 194 bits (492), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 108/259 (41%), Positives = 154/259 (59%), Gaps = 14/259 (5%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
++P++Y Y+I+ GIEK HPFDS K+G + + + + K P S+ L +
Sbjct: 65 EIPIVYDESYNITACGIEKWHPFDSCKYGNVYRQIRQQ---VKGSHFTPKMLSRGTFLYL 121
Query: 94 -HSESYLKSLQSSPNVSIIIEVP----PVALFPNCLVQRKVLYPFRKQVGGTILAAKLAK 148
S+ YL + S S +IE+P P A +CL+ +L G+I AAKLA
Sbjct: 122 GMSKWYLLKMCYSAYASTLIELPVFFLPGAFLRSCLLDSMLL-----ATSGSIQAAKLAL 176
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEK 208
E+GWAIN+ GG+HH S + GGGFC Y DI+L ++Y N+ +++I+DLDAHQGNG+E+
Sbjct: 177 EKGWAINLSGGYHHASLNRGGGFCIYPDITLVVNYLKRCCNLKKIVIVDLDAHQGNGYER 236
Query: 209 DFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFD 268
DF +DS VYI+D +N IYP D+ A + I + T+ +Y+K L LE D
Sbjct: 237 DFLNDSSVYIIDFYNSYIYPGDHIAEQAISCFEHIDKDTSDQQYIKTLQRDLETHLKD-D 295
Query: 269 PELVIYNAGTDILEGDPLG 287
E +IYNAGTDI+ GDPLG
Sbjct: 296 MEFLIYNAGTDIMAGDPLG 314
>gi|149174347|ref|ZP_01852974.1| deacetylase [Planctomyces maris DSM 8797]
gi|148846892|gb|EDL61228.1| deacetylase [Planctomyces maris DSM 8797]
Length = 319
Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 108/264 (40%), Positives = 155/264 (58%), Gaps = 9/264 (3%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSE-GFLDKNCIVEPLEA-SKEDLLVVH 94
++YSP Y+I F G+E+LHPFDS K+GR + L + G + V P A S+E+LL+VH
Sbjct: 4 IVYSPKYNIGFYGLERLHPFDSRKYGRAWKQLRARFGKSLRQIHVSPERAVSREELLLVH 63
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAI 154
+E YLK L +S V+ +E+ P+ P ++ VL P R GTI+AA+ + E G AI
Sbjct: 64 TEGYLKQLSNSMYVAQALELAPLQFLPFWIIDHHVLRPMRWATRGTIVAAQESLEHGLAI 123
Query: 155 NVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNIS---RVMIIDLDAHQGNGHEKDFS 211
N+ GG+HH +G GFC YAD ++ + Q IS R++ +D DAHQGNG F
Sbjct: 124 NLSGGYHHSKPAQGEGFCVYADAAIAVATLRQQALISETDRIVYVDTDAHQGNGVSHAFM 183
Query: 212 SDSRVYILDMFNPGIYPR-DYEARRFIDQKVEVVSGTTTNEYLKKLDEALE--VAGHTFD 268
+D+R ++ D+FN YP+ D AR +D ++ + T EY+ +L+ L +
Sbjct: 184 NDNRAFLFDIFNARAYPQNDVAARERLDCEIGITGSWTDREYMLELENRLPGFLDSVCQS 243
Query: 269 P-ELVIYNAGTDILEGDPLGMLKV 291
P L IYNAGTDI GDPLG L +
Sbjct: 244 PVGLAIYNAGTDIFAGDPLGGLNI 267
>gi|10437935|dbj|BAB15127.1| unnamed protein product [Homo sapiens]
gi|48146799|emb|CAG33622.1| HDAC11 [Homo sapiens]
Length = 225
Score = 187 bits (474), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 90/151 (59%), Positives = 114/151 (75%), Gaps = 1/151 (0%)
Query: 142 LAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIIDLDA 200
+A KLA ERGWAINVGGGFHHCS+D GGGFCAYADI+L I + F ++ ISR IIDLDA
Sbjct: 1 MAGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDA 60
Query: 201 HQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEAL 260
HQGNGHE+DF D RVYI+D++N IYP D A++ I +KVE+ GT +EYL K++ +
Sbjct: 61 HQGNGHERDFMDDKRVYIMDVYNRHIYPGDRFAKQAIRRKVELEWGTEDDEYLDKVERNI 120
Query: 261 EVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ + P++V+YNAGTDILEGD LG L +
Sbjct: 121 KKSLQEHLPDVVVYNAGTDILEGDRLGGLSI 151
>gi|168699615|ref|ZP_02731892.1| Deacetylases, including yeast histone deacetylase and acetoin
utilization protein [Gemmata obscuriglobus UQM 2246]
Length = 324
Score = 186 bits (473), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 107/267 (40%), Positives = 150/267 (56%), Gaps = 10/267 (3%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFL--DKNCIVEPLEASKEDLLV 92
+ LIY+ Y+I FLG+E+LHPFDS K+GR + + S G L D+ + P S +L V
Sbjct: 1 MKLIYTRRYNIGFLGLERLHPFDSRKYGRAWRAIGSVGRLLRDRALVGVPRPVSVAELSV 60
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
H SYL L ++ ++E+P + P V R VL P R V G+++AA+ A G
Sbjct: 61 THDPSYLARLGDPRELAWVLELPFLRRLPAWAVWRAVLRPMRWAVAGSLVAAREALTHGL 120
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNIS---RVMIIDLDAHQGNGHEKD 209
A+N+ GG+HH + G GFC + DI+ +H ++ RV+ +DLDAHQGNG
Sbjct: 121 ALNLSGGYHHARPNGGEGFCVFNDIAHLVHGLRTAGRLAPDDRVVYVDLDAHQGNGVCHH 180
Query: 210 FSSDSRVYILDMFNPGIYP-RDYEARRFIDQKVEVVSGTTTNEYLKKLDEA----LEVAG 264
F SD RV++ D FNP IYP D EARR ID V + T EY++ L+ L+
Sbjct: 181 FRSDPRVFLYDAFNPHIYPAHDQEARRRIDCAVPLPDHCTGGEYMRLLNLTLPGFLDSVC 240
Query: 265 HTFDPELVIYNAGTDILEGDPLGMLKV 291
+ L +YNAGTD+ GD LG L +
Sbjct: 241 RSGRVGLAVYNAGTDVFAGDTLGGLNL 267
>gi|168701002|ref|ZP_02733279.1| Deacetylases, including yeast histone deacetylase and acetoin
utilization protein [Gemmata obscuriglobus UQM 2246]
Length = 384
Score = 174 bits (440), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 100/263 (38%), Positives = 146/263 (55%), Gaps = 10/263 (3%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSE--GFLDKNCIVEPLEASKEDLLV 92
+ L+Y+ Y+I FLG+E+LHPFDS K+GR + E ++ + P AS DL
Sbjct: 1 MKLVYTRRYNIGFLGLERLHPFDSRKYGRAWNAVGREERRLRNRAWMGVPRPASFADLSA 60
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
VH +YL L+ S ++ +E+P + P V+ VL P R V G+++A + A G
Sbjct: 61 VHDPAYLDRLRDSKVLASALELPFIRRLPAWAVRWTVLRPMRWAVAGSLVAGRAALTDGL 120
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNIS---RVMIIDLDAHQGNGHEKD 209
++N+ GG+HH D G GFC + D++ IH + ++ RV I LDAHQGNG
Sbjct: 121 SVNLSGGYHHAKPDRGEGFCVFNDVAYLIHRLRTEGRLAADGRVAYIGLDAHQGNGVSLH 180
Query: 210 FSSDSRVYILDMFNPGIYPR-DYEARRFIDQKVEVVSGTTTNEYLKKLDEA----LEVAG 264
F SD+RV + D +NP IYP D+ AR ID V + + T EYL+ L+ + L+ G
Sbjct: 181 FRSDTRVLMYDAYNPRIYPSYDHGARARIDCPVPLPANCTGAEYLRVLELSLPGFLDSVG 240
Query: 265 HTFDPELVIYNAGTDILEGDPLG 287
+ L + NAGTD+ GD LG
Sbjct: 241 RSGRVALAVDNAGTDVYAGDALG 263
>gi|83647787|ref|YP_436222.1| deacetylase [Hahella chejuensis KCTC 2396]
gi|83635830|gb|ABC31797.1| Deacetylases, including yeast histone deacetylase and acetoin
utilization protein [Hahella chejuensis KCTC 2396]
Length = 318
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 107/275 (38%), Positives = 148/275 (53%), Gaps = 20/275 (7%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNC-----IVEPLEASK 87
K L YSP YD G+ LHPFD+SK+ R L E F +K I +P A+
Sbjct: 1 MKTLLAYSPHYDFRLPGLAALHPFDASKYSRAWSVLR-EHFGEKLADITLQINDP--ATT 57
Query: 88 EDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAA-KL 146
E L + HS YL SL S +S ++E + P+ L+Q+ +L P + V GTI AA K
Sbjct: 58 ESLALAHSREYLASLSHSAAISRVVENSLLKWLPSSLLQKGLLTPAKYAVAGTITAAHKA 117
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNIS---RVMIIDLDAHQG 203
+E N+GGGFHH D G GFC ++D +L I + + V++IDLDAH+G
Sbjct: 118 IEEEAIVFNLGGGFHHAFRDHGEGFCFFSDAALAIQLLRAEKRLGSADEVLMIDLDAHRG 177
Query: 204 NGHEKDFSSDSRVYILDMFN----PGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEA 259
NG E +SD V+ DM+N PG++ + + F+ + + +GT T YL L E
Sbjct: 178 NGFESYIASDPMVHNFDMYNFQAYPGLHQGNPDEFPFM---LPLHAGTDTEVYLNILREE 234
Query: 260 L-EVAGHTFDPELVIYNAGTDILEGDPLGMLKVKW 293
L + H P+L YNAGTDIL+GD LG L V +
Sbjct: 235 LPRLFNHVKQPKLAFYNAGTDILKGDKLGGLSVDY 269
>gi|119584566|gb|EAW64162.1| histone deacetylase 11, isoform CRA_f [Homo sapiens]
Length = 113
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/113 (64%), Positives = 88/113 (77%), Gaps = 1/113 (0%)
Query: 142 LAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIIDLDA 200
+A KLA ERGWAINVGGGFHHCS+D GGGFCAYADI+L I + F ++ ISR IIDLDA
Sbjct: 1 MAGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDA 60
Query: 201 HQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYL 253
HQGNGHE+DF D RVYI+D++N IYP D A++ I +KVE+ GT +EYL
Sbjct: 61 HQGNGHERDFMDDKRVYIMDVYNRHIYPGDRFAKQAIRRKVELEWGTEDDEYL 113
>gi|326520441|dbj|BAK07479.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 143
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 70/83 (84%), Positives = 78/83 (93%)
Query: 137 VGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMII 196
VGG+IL+AKLA ERGWAINVGGGFHHCSA+EGGGFCAYADISLCI +AFV+LNISRVMII
Sbjct: 1 VGGSILSAKLALERGWAINVGGGFHHCSAEEGGGFCAYADISLCIQFAFVRLNISRVMII 60
Query: 197 DLDAHQGNGHEKDFSSDSRVYIL 219
DLDAHQGNG+EKDF++D YIL
Sbjct: 61 DLDAHQGNGYEKDFANDGMSYIL 83
>gi|119584570|gb|EAW64166.1| histone deacetylase 11, isoform CRA_j [Homo sapiens]
Length = 264
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/150 (45%), Positives = 93/150 (62%), Gaps = 2/150 (1%)
Query: 23 SSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEP 82
+++LY +P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L + +VE
Sbjct: 4 TTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEA 63
Query: 83 LEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTIL 142
EAS+EDLLVVH+ YL L+ S V+ I E+PPV PN LVQRKVL P R Q GGTI+
Sbjct: 64 REASEEDLLVVHTRRYLNELKWSFAVATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIM 123
Query: 143 AAKLAKERGWAINVGGGFHHCSADEGGGFC 172
+A A G ++ FC
Sbjct: 124 G--VASTTAPATVAGASVPMRTSRSPSSFC 151
>gi|392555154|ref|ZP_10302291.1| histone deacetylase superfamily protein [Pseudoalteromonas undina
NCIMB 2128]
Length = 305
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 135/266 (50%), Gaps = 19/266 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+ +IY P ++ ++ LHPFD K+ ++ L I+ P E ++ +
Sbjct: 1 MKVIYEPGFNYQLGLLKYLHPFDGEKFAKVISELGGSDI----EIIYPSEPVPTKVINEY 56
Query: 95 SESYLKSLQSSPNVSI-IIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWA 153
++ L S + + +EVP + + +K+L P R V GT+L A+ A + G
Sbjct: 57 LNELMRKLVLSKTLVLRTLEVPSIPFVSFGFIDKKILTPMRLAVSGTLLGAENALKSGEI 116
Query: 154 I-NVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNIS-------RVMIIDLDAHQGNG 205
+ N+ GGFHH S GFC Y D+ + ++ QL S +V+IID+DAH GNG
Sbjct: 117 MWNLSGGFHHASYANMEGFCVYNDVGI----SYQQLRKSGHLSETDKVLIIDVDAHHGNG 172
Query: 206 HEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGH 265
+ F + V++LD++N IYP R ++ V + SG EYL+KL +ALE+
Sbjct: 173 NAFSFKDNENVHLLDVYNEDIYPTSQYTRNRVNFPVPLKSGVEGCEYLEKLTQALELI-- 230
Query: 266 TFDPELVIYNAGTDILEGDPLGMLKV 291
T + LV AGTD+L D LG K+
Sbjct: 231 TVNYALVFVVAGTDVLAVDKLGGFKL 256
>gi|410632681|ref|ZP_11343334.1| histone deacetylase family protein [Glaciecola arctica BSs20135]
gi|410147760|dbj|GAC20201.1| histone deacetylase family protein [Glaciecola arctica BSs20135]
Length = 298
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 138/265 (52%), Gaps = 28/265 (10%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+PL++ P Y S L + H F K+ I L+ G DK+ +P+ S +DL V
Sbjct: 2 IPLVFHPIY--SQLDLAVRHRFPIEKYQGIRDRLAELGVTDKS-FQQPMPVSPQDLRQVF 58
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQ--------VGGTILAAKL 146
+ Y++ L S + P A+ R++ +P+ +Q VGGT+L A+L
Sbjct: 59 NPQYIQQLVSG-------TLDPKAM-------RRIGFPWSEQLIQRSLTAVGGTVLTAEL 104
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
A + G A+N+ GG+HH A+ G GFC + D+ L + NI +V+I D D HQG+G
Sbjct: 105 ALQHGKALNLTGGYHHAFANYGSGFCLFNDLYLAALTMLQKPNIDKVLIFDCDVHQGDGT 164
Query: 207 EKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHT 266
K S+++V+ L + +P ++ D + GTT EYL+ +D AL++A ++
Sbjct: 165 AKLAESNAQVFTLSIHGEKNFP---HRKQVSDLDFNLAKGTTDCEYLETVDCALQLAVNS 221
Query: 267 FDPELVIYNAGTDILEGDPLGMLKV 291
P+ VIY+AG DI D LG L V
Sbjct: 222 CQPDAVIYDAGVDIHIDDDLGHLNV 246
>gi|116327589|ref|YP_797309.1| deacetylase [Leptospira borgpetersenii serovar Hardjo-bovis str.
L550]
gi|116331800|ref|YP_801518.1| deacetylase [Leptospira borgpetersenii serovar Hardjo-bovis str.
JB197]
gi|116120333|gb|ABJ78376.1| Deacetylase [Leptospira borgpetersenii serovar Hardjo-bovis str.
L550]
gi|116125489|gb|ABJ76760.1| Deacetylase [Leptospira borgpetersenii serovar Hardjo-bovis str.
JB197]
Length = 301
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 130/258 (50%), Gaps = 15/258 (5%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
++ L+Y PDY+I LG H F + K+ I + + L + P A +DL +V
Sbjct: 7 RIGLVYHPDYNID-LGP---HIFPARKYQMIYDLVKQDRKLADLYVYRPEPAKDKDLTLV 62
Query: 94 HSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWA 153
H++ +LK S +++ + + ++++ F VGGTILA +L ++ +
Sbjct: 63 HTKEFLKDFFS-------LKITERTQYSELPLTKQIVQSFVLAVGGTILATELTQKYKFV 115
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSD 213
++GGGFHH D GFC D ++ + +++ IDLD HQGNG+ F D
Sbjct: 116 YHIGGGFHHSMPDRAEGFCYLNDAAIAVKLYQRTYPGRKILFIDLDLHQGNGNSVVFQED 175
Query: 214 SRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVI 273
S V+ M +YP+ + + +D +E GT +YL+ L E+L F P+L+
Sbjct: 176 SDVFTFSMHQENLYPK--KEKSGLDIPLE--EGTEDGKYLELLTESLHKIKSDFKPDLIF 231
Query: 274 YNAGTDILEGDPLGMLKV 291
Y AG D EGD LG LK+
Sbjct: 232 YIAGADPFEGDSLGDLKL 249
>gi|359454587|ref|ZP_09243865.1| acetoin utilization protein AcuC [Pseudoalteromonas sp. BSi20495]
gi|358048376|dbj|GAA80114.1| acetoin utilization protein AcuC [Pseudoalteromonas sp. BSi20495]
Length = 305
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 133/266 (50%), Gaps = 19/266 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+ +IY P ++ ++ LHPFD K+ ++ L S I+ P+E ++ +
Sbjct: 1 MKIIYEPRFNYQLGLLKYLHPFDGEKFAKVITELDSLNI----EIIHPMEPVSSVVINEY 56
Query: 95 SESYLKSLQSSPNVSI-IIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG-- 151
++ L S + +EVP + + K+L P R V GT+L A+ A G
Sbjct: 57 LNELMRKLVLSKTLVFRALEVPKIPFVSFNFLDNKILLPMRLAVAGTLLGAERALGSGDI 116
Query: 152 -WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLN-----ISRVMIIDLDAHQGNG 205
W N+ GGFHH S GFC Y DI I Y ++ N +V+IID+DAH GNG
Sbjct: 117 MW--NLSGGFHHASNVNMEGFCIYNDIG--ISYQQLRKNGQLSETDKVLIIDVDAHHGNG 172
Query: 206 HEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGH 265
+ F + +++LD++N IYP R ++ V + SG +EYL KL++AL++
Sbjct: 173 NAYSFKDNENIHLLDVYNADIYPTSDFTRNRVNFPVPLKSGVEGHEYLDKLNQALKLVKA 232
Query: 266 TFDPELVIYNAGTDILEGDPLGMLKV 291
+ VI AGTD+L D LG K+
Sbjct: 233 DYALAFVI--AGTDVLAIDKLGGFKL 256
>gi|295691473|ref|YP_003595166.1| histone deacetylase [Caulobacter segnis ATCC 21756]
gi|295433376|gb|ADG12548.1| Histone deacetylase [Caulobacter segnis ATCC 21756]
Length = 304
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 121/260 (46%), Gaps = 20/260 (7%)
Query: 36 PLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHS 95
P+++ P + + H F K+ R+ L +EG + P E L + H+
Sbjct: 6 PIVHHPAFRAE---MPAGHRFPMDKFSRLAAVLEAEGVPGADGFARPEPVDVETLRLAHN 62
Query: 96 ESYLKSLQSSPNVSIIIEVPPVAL----FPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
E Y++ + I + +PP + PN V R GGT+LAA+LA ERG
Sbjct: 63 EDYVRGV-------IELSLPPEVVRRIGLPNT---ESVATRARAATGGTLLAARLALERG 112
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A N GG HH SA+ G GFC + D+++ + + +V+++DLD HQG+G + F
Sbjct: 113 IACNTAGGSHHASAESGAGFCVFNDVAVAARRLQAEGRVGQVLVVDLDVHQGDGTARIFE 172
Query: 212 SDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPEL 271
D V+ M +P + D VE+ G +YL KL E L + P++
Sbjct: 173 DDPSVFTFSMHAEKNFP---HRKATSDLDVELADGMGDEDYLGKLAEILPALLSSVRPDI 229
Query: 272 VIYNAGTDILEGDPLGMLKV 291
V +NAG D D LG L +
Sbjct: 230 VFFNAGVDPHADDKLGRLSL 249
>gi|24215622|ref|NP_713103.1| histone deacetylase [Leptospira interrogans serovar Lai str. 56601]
gi|386074823|ref|YP_005989141.1| histone deacetylase [Leptospira interrogans serovar Lai str. IPAV]
gi|24196779|gb|AAN50121.1| histone deacetylase [Leptospira interrogans serovar Lai str. 56601]
gi|353458613|gb|AER03158.1| histone deacetylase [Leptospira interrogans serovar Lai str. IPAV]
Length = 302
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 131/260 (50%), Gaps = 15/260 (5%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
++ L+Y PDY++ LG H F + K+ + + + L I +P A +DL +V
Sbjct: 7 RIGLVYHPDYNLD-LGP---HVFPARKYQMVYDLVKRDSKLSNLYIYKPDLAKTKDLSLV 62
Query: 94 HSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWA 153
H++ +L S + + + + +++++ F VGGTIL+ +LA++ +
Sbjct: 63 HTQEFLDDFFS-------LNITERTQYSELPLTKQIVHSFVLAVGGTILSMELAQKYKFV 115
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSD 213
++GGGFHH D GFC D ++ + +++ IDLD HQGNG+ F +D
Sbjct: 116 YHIGGGFHHSMPDRAEGFCYLNDAAIASKLYQKEYPDKKILFIDLDLHQGNGNSFIFQND 175
Query: 214 SRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVI 273
V+ M +YP+ ++ D + + G EYL+ L+++L F P+L+
Sbjct: 176 PDVFTFSMHQENLYPKKEKS----DLDISLEEGIGDKEYLELLEKSLRKIESDFKPDLIF 231
Query: 274 YNAGTDILEGDPLGMLKVKW 293
Y AG D EGD LG LK+ +
Sbjct: 232 YIAGADPFEGDSLGDLKLTF 251
>gi|418678733|ref|ZP_13240007.1| histone deacetylase family protein [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|418687687|ref|ZP_13248846.1| histone deacetylase family protein [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|418741912|ref|ZP_13298285.1| histone deacetylase family protein [Leptospira kirschneri serovar
Valbuzzi str. 200702274]
gi|421129283|ref|ZP_15589484.1| histone deacetylase family protein [Leptospira kirschneri str.
2008720114]
gi|400321923|gb|EJO69783.1| histone deacetylase family protein [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|410359479|gb|EKP06577.1| histone deacetylase family protein [Leptospira kirschneri str.
2008720114]
gi|410738011|gb|EKQ82750.1| histone deacetylase family protein [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|410750270|gb|EKR07250.1| histone deacetylase family protein [Leptospira kirschneri serovar
Valbuzzi str. 200702274]
Length = 302
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 130/260 (50%), Gaps = 15/260 (5%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
++ L+Y PDY++ LG H F + K+ + + + L I +P A +DL +V
Sbjct: 7 RIGLVYHPDYNLD-LGP---HVFPARKYQMVYDLVKRDSKLSNLYIYKPDLAKTKDLSLV 62
Query: 94 HSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWA 153
H++ +L S +++ + + +++++ F VGGTIL+ +L ++ +
Sbjct: 63 HTQEFLDDFFS-------LKITERTQYSELPLTKQIVHSFVLAVGGTILSMELTQKYKFV 115
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSD 213
++GGGFHH D GFC D ++ + +++ IDLD HQGNG+ F D
Sbjct: 116 YHIGGGFHHSMPDRAEGFCYLNDAAIASKLYQKEYPGKKILFIDLDLHQGNGNSFVFQDD 175
Query: 214 SRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVI 273
V+ M +YP+ ++ D + + GT EYL+ L ++L F P+L+
Sbjct: 176 PDVFTFSMHQENLYPKKEKS----DLDISLEEGTDDKEYLELLKKSLHKIESDFKPDLIF 231
Query: 274 YNAGTDILEGDPLGMLKVKW 293
Y AG D EGD LG LK+ +
Sbjct: 232 YIAGADPFEGDSLGDLKLTF 251
>gi|398339724|ref|ZP_10524427.1| histone deacetylase [Leptospira kirschneri serovar Bim str. 1051]
Length = 293
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 128/257 (49%), Gaps = 15/257 (5%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
++Y PDY++ LG H F + K+ + + + L I +P A +DL +VH++
Sbjct: 1 MVYHPDYNLD-LGP---HVFPARKYQMVYDLVKRDSKLSNLYIYKPDLAKTKDLSLVHTQ 56
Query: 97 SYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINV 156
+L S +++ + + +++++ F VGGTIL+ +L ++ + ++
Sbjct: 57 EFLDDFFS-------LKITERTQYSELPLTKQIVHSFVLAVGGTILSMELTQKYKFVYHI 109
Query: 157 GGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRV 216
GGGFHH D GFC D ++ + +++ IDLD HQGNG+ F D V
Sbjct: 110 GGGFHHSMPDRAEGFCYLNDAAIASKLYQKEYPGKKILFIDLDLHQGNGNSFVFQDDPDV 169
Query: 217 YILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNA 276
+ M +YP+ ++ D + + GT EYL+ L ++L F P+L+ Y A
Sbjct: 170 FTFSMHQENLYPKKEKS----DLDISLEEGTDDKEYLELLKKSLHKIESDFKPDLIFYIA 225
Query: 277 GTDILEGDPLGMLKVKW 293
G D EGD LG LK+ +
Sbjct: 226 GADPFEGDSLGDLKLTF 242
>gi|304570490|ref|YP_001104.2| histone deacetylase [Leptospira interrogans serovar Copenhageni
str. Fiocruz L1-130]
Length = 302
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 130/260 (50%), Gaps = 15/260 (5%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
++ L+Y PDY++ LG H F + K+ + + + L I +P A +DL +V
Sbjct: 7 RIGLVYHPDYNLD-LGP---HVFPARKYQMVYDLVKRDSKLSNLYIYKPDLAKTKDLSLV 62
Query: 94 HSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWA 153
H++ +L S + + + + +++++ F VGGTIL+ +L ++ +
Sbjct: 63 HTQEFLDDFFS-------LNITERTQYSELPLTKQIVHSFVLAVGGTILSMELTQKYKFV 115
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSD 213
++GGGFHH D GFC D ++ + +++ IDLD HQGNG+ F +D
Sbjct: 116 YHIGGGFHHSMPDRAEGFCYLNDAAIASKLYQKEYPDKKILFIDLDLHQGNGNSFIFQND 175
Query: 214 SRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVI 273
V+ M +YP+ ++ D + + G EYL+ L+++L F P+L+
Sbjct: 176 PDVFTFSMHQENLYPKKEKS----DLDISLEEGIGDKEYLELLEKSLRKIESDFKPDLIF 231
Query: 274 YNAGTDILEGDPLGMLKVKW 293
Y AG D EGD LG LK+ +
Sbjct: 232 YIAGADPFEGDSLGDLKLTF 251
>gi|359683254|ref|ZP_09253255.1| deacetylase [Leptospira santarosai str. 2000030832]
Length = 292
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 128/257 (49%), Gaps = 15/257 (5%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
++Y PDY+I LG H F + K+ I + + L + P A+ +DL +VH+E
Sbjct: 1 MVYHPDYNID-LGP---HIFPARKYQMIYDLVKQDHKLANLYVYRPEPATDKDLALVHTE 56
Query: 97 SYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINV 156
+L S I E + P + ++++ F VGGTILA +L ++ + ++
Sbjct: 57 EFLNDFFSLK----ITERTQSSELP---LTKQIVQSFVLAVGGTILATELTEKYKFVYHI 109
Query: 157 GGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRV 216
GGGFHH D GFC D ++ + +++ IDLD HQGNG+ F D V
Sbjct: 110 GGGFHHSMPDRAEGFCYLNDAAIAVKLYQRAYPGRKILFIDLDLHQGNGNSVVFQEDPDV 169
Query: 217 YILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNA 276
+ M +YP+ + + +D +E GT +YL+ L E+L F P+L+ Y A
Sbjct: 170 FTFSMHQENLYPK--KEKSGLDIPLE--EGTNDGKYLELLVESLRKIESDFKPDLIFYIA 225
Query: 277 GTDILEGDPLGMLKVKW 293
G D EGD LG LK+ +
Sbjct: 226 GADPFEGDSLGDLKLTF 242
>gi|422002976|ref|ZP_16350210.1| deacetylase [Leptospira santarosai serovar Shermani str. LT 821]
gi|417258446|gb|EKT87834.1| deacetylase [Leptospira santarosai serovar Shermani str. LT 821]
Length = 292
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 127/257 (49%), Gaps = 15/257 (5%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
++Y PDY+I LG H F + K+ I + + L + P A +DL +VH+E
Sbjct: 1 MVYHPDYNID-LGP---HIFPARKYQMIYDLVKQDHKLANLYVYRPEPAKDKDLALVHTE 56
Query: 97 SYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINV 156
+L S I E + P + ++++ F VGGTILA +L ++ + ++
Sbjct: 57 EFLNDFFSLK----ITERTQSSELP---LTKQIVQSFVLAVGGTILATELTEKYKFVYHI 109
Query: 157 GGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRV 216
GGGFHH D GFC D ++ + +++ IDLD HQGNG+ F D V
Sbjct: 110 GGGFHHSMPDRAEGFCYLNDAAIAVKLYQRAYPGRKILFIDLDLHQGNGNSVVFQEDPDV 169
Query: 217 YILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNA 276
+ M +YP+ + + +D +E GT +YL+ L E+L F P+L+ Y A
Sbjct: 170 FTFSMHQENLYPK--KEKSGLDIPLE--EGTNDGKYLELLVESLRKIESDFKPDLIFYIA 225
Query: 277 GTDILEGDPLGMLKVKW 293
G D EGD LG LK+ +
Sbjct: 226 GADPFEGDSLGDLKLTF 242
>gi|398348063|ref|ZP_10532766.1| deacetylase [Leptospira broomii str. 5399]
Length = 330
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 129/277 (46%), Gaps = 21/277 (7%)
Query: 17 KRNRILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDK 76
KR+ L KL ++ LIY P+Y++ LG H F + K+G I + + L
Sbjct: 24 KRHAPLRQKLE------RIALIYHPEYNMD-LGA---HVFPARKYGMIYNLVKEDPKLSG 73
Query: 77 NCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQ 136
++P E+L +VH+ +L + + ++ + ++++ F
Sbjct: 74 LLALQPAPVGVEELSLVHTPEFLSDFMN-------LRYTDRTMYSELPLNKEIVRSFCLG 126
Query: 137 VGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMII 196
VGGTILA + + + ++GGGFHH D GFC D ++ + +V+ I
Sbjct: 127 VGGTILATETTENYKYVYHIGGGFHHSMPDRAEGFCYLNDAAVATKLYLQKYPDKKVLYI 186
Query: 197 DLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKL 256
DLD HQGNG+ K F D V+ M +YP+ + + + +GT YLK L
Sbjct: 187 DLDLHQGNGNAKVFKDDPSVWTFSMHQEQLYPK----KELSSLDIPLENGTDDKTYLKAL 242
Query: 257 DEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKVKW 293
E L+ F P+L+ Y AG D E D LG LK+ +
Sbjct: 243 AEGLDKTRANFTPDLIYYFAGADPFEDDSLGDLKLTF 279
>gi|398342481|ref|ZP_10527184.1| deacetylase [Leptospira inadai serovar Lyme str. 10]
Length = 330
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 126/260 (48%), Gaps = 15/260 (5%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
++ LIY P+Y++ LG H F + K+G I + + L ++P E+L +V
Sbjct: 35 RIALIYHPEYNMD-LGA---HVFPARKYGMIYNLVKEDPKLSGLVALQPAPVGVEELSLV 90
Query: 94 HSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWA 153
H+ +L + + ++ + ++++ F VGGTILA + + +
Sbjct: 91 HTPEFLSDFMN-------LRYTDRTMYSELPLNKEIVRSFCLGVGGTILATETTENYKYV 143
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSD 213
++GGGFHH D GFC D ++ + +V+ IDLD HQGNG+ K F D
Sbjct: 144 YHIGGGFHHSMPDRAEGFCYLNDAAVATKLYLQKYPDKKVLYIDLDLHQGNGNAKVFKDD 203
Query: 214 SRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVI 273
V+ M +YP+ + R +D +E +GT YLK L E L+ F P+L+
Sbjct: 204 PAVWTFSMHQEQLYPK--KERSSLDIPLE--NGTGDKTYLKALVEGLDKVRANFMPDLIY 259
Query: 274 YNAGTDILEGDPLGMLKVKW 293
Y AG D E D LG LK+ +
Sbjct: 260 YFAGADPFEDDSLGDLKLTF 279
>gi|392398578|ref|YP_006435179.1| deacetylase [Flexibacter litoralis DSM 6794]
gi|390529656|gb|AFM05386.1| deacetylase, histone deacetylase/acetoin utilization protein
[Flexibacter litoralis DSM 6794]
Length = 300
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 127/257 (49%), Gaps = 16/257 (6%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
L + +SP Y S + + H F K+ + + L EG K EP+ S++ ++ VH
Sbjct: 2 LKIAFSPVYAHS---LPQTHRFPMLKYELLPEQLIYEGTATKENFFEPIPISEKKIVRVH 58
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
+ Y L++ +S+ + FP LV R+++ GGTI ++ A + G
Sbjct: 59 TSEYWNKLKT---LSLTKKEIRKTGFPLSQKLVDREIII-----AGGTIQNSEFALQYGA 110
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
++N+ GG HH + G GFC DI+L ++ + NI++++IIDLD HQGNG + F +
Sbjct: 111 SMNIAGGTHHAFTEHGEGFCLLNDIALASYHLIDEHNINKILIIDLDVHQGNGTAEIFQN 170
Query: 213 DSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELV 272
+ RV+ M YP E D +E+ GT YLK L E L P+ +
Sbjct: 171 EKRVFTFSMHGEKNYPHKKENS---DLDIELKDGTDDKTYLKVLKETLPKLIQEQKPQFI 227
Query: 273 IYNAGTDILEGDPLGML 289
+ AG D+L D LG L
Sbjct: 228 FFQAGVDVLATDKLGRL 244
>gi|381205004|ref|ZP_09912075.1| histone deacetylase/AcuC/AphA family protein [SAR324 cluster
bacterium JCVI-SC AAA005]
Length = 319
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 126/262 (48%), Gaps = 17/262 (6%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY PDYDI E H F SK+ R+ + +S E L +P AS + L VH
Sbjct: 5 LPLIYHPDYDIPEWNEE--HRFPMSKFRRLYKIISEEKSLSPVEFHQPEVASTDHLQAVH 62
Query: 95 SESYLKSLQSS---PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
+ Y++ + + + I +P + L +R + +GGTIL +LA + G
Sbjct: 63 TLDYIQQFMENRLDKSAARRIGLP----WTEGLARRTI-----TAIGGTILTLQLALKHG 113
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A N+GGG HH D G GFC + D S+ + ++ +++I+DLD HQG+G
Sbjct: 114 LACNLGGGTHHAFPDFGSGFCIFNDASVAARMLLQEGSVQQILIVDLDVHQGDGTAFIHQ 173
Query: 212 SDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPEL 271
+ V+ M +P ++ D V + + YL+ L L +P+L
Sbjct: 174 DEVAVFTFSMHCQSNFPF---RKQHSDLDVPLPENLDDDSYLRILRANLPELLDRTEPDL 230
Query: 272 VIYNAGTDILEGDPLGMLKVKW 293
VIYNAG D + DPLG L + W
Sbjct: 231 VIYNAGVDPFKDDPLGKLNLTW 252
>gi|392404048|ref|YP_006440660.1| histone deacetylase superfamily [Turneriella parva DSM 21527]
gi|390612002|gb|AFM13154.1| histone deacetylase superfamily [Turneriella parva DSM 21527]
Length = 294
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/257 (34%), Positives = 120/257 (46%), Gaps = 19/257 (7%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
L+YSP YD+S + H + K+ ++ L + EP+ A+KE LL+VH+E
Sbjct: 8 LVYSPIYDLS----DYTHVISAGKYRQLYDALK----FSRWNWNEPVAATKEQLLLVHTE 59
Query: 97 SYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINV 156
YLK + + E A P + +++ GGTILAA+LA + G A N+
Sbjct: 60 RYLKDFLGAR----LTEQTQRAEIP---IDERIVNAVCTAAGGTILAAELALKHGVASNL 112
Query: 157 GGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRV 216
GGFHH AD GFC D L I +V +IDLD HQGNG K D
Sbjct: 113 SGGFHHAFADHAEGFCFVNDTVLAIRALRKTRPGLKVAVIDLDVHQGNGTAKLLQGDENS 172
Query: 217 YILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNA 276
Y M YP + VE+ S EYL+ L E L+ F P+L+ Y A
Sbjct: 173 YTFSMHEKENYP----VKETGSHDVELPSHLGDAEYLRLLAENLDKLKAAFFPDLIFYVA 228
Query: 277 GTDILEGDPLGMLKVKW 293
G DI D LG L++ +
Sbjct: 229 GVDIYRDDALGGLQLSF 245
>gi|183220176|ref|YP_001838172.1| putative arginase/deacetylase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189910296|ref|YP_001961851.1| deacetylase [Leptospira biflexa serovar Patoc strain 'Patoc 1
(Ames)']
gi|167774972|gb|ABZ93273.1| Deacetylase [Leptospira biflexa serovar Patoc strain 'Patoc 1
(Ames)']
gi|167778598|gb|ABZ96896.1| Putative arginase/deacetylase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
Length = 299
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 121/257 (47%), Gaps = 15/257 (5%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
L LIY Y++ G H F + K+ + + + I+ P + DL +VH
Sbjct: 6 LALIYHSSYNLELPG----HVFPAHKYSHLYNRVKRDPVYASWDILLPKKVDDADLELVH 61
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAI 154
++ YL L S E P ++ + R ++ F VGGT+LA++L+ + +A
Sbjct: 62 TKEYLDDLFS-------YEHTPRTMYSELPLNRSIVESFMYGVGGTVLASELSDKHQFAF 114
Query: 155 NVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDS 214
N+GGG+HH D GFC D+++ + +IIDLD HQGNG+ F D
Sbjct: 115 NMGGGYHHSFPDRAEGFCYLNDVAIAVKKQKETKPDINALIIDLDLHQGNGNSYIFQYDD 174
Query: 215 RVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIY 274
+V+ M +YP+ + + V + T +EYL L+ +L FD ++ Y
Sbjct: 175 KVFTFSMHQGNLYPK----KEISNLDVNLEPNTKDDEYLSILETSLNQIRKDFDSNIIYY 230
Query: 275 NAGTDILEGDPLGMLKV 291
AG D E D LG LK+
Sbjct: 231 VAGADPYEDDSLGELKI 247
>gi|78213287|ref|YP_382066.1| histone deacetylase/AcuC/AphA family protein [Synechococcus sp.
CC9605]
gi|78197746|gb|ABB35511.1| putative histone deacetylase/AcuC/AphA family protein
[Synechococcus sp. CC9605]
Length = 316
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 126/265 (47%), Gaps = 24/265 (9%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LP++Y P Y + H F +K+ + Q L +G + + + PL ++ DL
Sbjct: 12 LPLPVVYHPHYSAP---LPSTHRFPMAKFRLLHQLLLEQGVVQADEVHRPLSIARRDLES 68
Query: 93 VHSESYLKSLQ----SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAK 148
VH +Y ++ S P I +P LVQR L VGGT+L A+LA
Sbjct: 69 VHPRTYHEAFSRDHLSRPE-QRRIGLPAT----RPLVQRTWL-----AVGGTLLTARLAL 118
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEK 208
+RG A ++ GG HH G GFC + D ++ + R++I+DLD HQG+G
Sbjct: 119 QRGLASHLAGGTHHAHPGFGSGFCIFNDCAVAARVLLRTGEVRRILIVDLDVHQGDGSAA 178
Query: 209 DFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV--VSGTTTNEYLKKLDEALEVAGHT 266
F D RV L + +P R +D +++ GT+ ++YL + + L A T
Sbjct: 179 CFQHDPRVTTLSVHAASNFP-----LRKVDGDIDIPLADGTSDDDYLAAIADRLPDALDT 233
Query: 267 FDPELVIYNAGTDILEGDPLGMLKV 291
P+LV+YNAG D D LG L +
Sbjct: 234 IAPDLVLYNAGVDPHRDDRLGRLAL 258
>gi|374584482|ref|ZP_09657574.1| histone deacetylase superfamily [Leptonema illini DSM 21528]
gi|373873343|gb|EHQ05337.1| histone deacetylase superfamily [Leptonema illini DSM 21528]
Length = 313
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 129/265 (48%), Gaps = 25/265 (9%)
Query: 30 IPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKED 89
+P+F IYSP Y++ + H F + K+ I L + ++ EP+ AS +D
Sbjct: 20 LPVF----IYSPGYNLQL----EAHVFPAVKFSLIYSKLKEDPAFAQHRFFEPMPASFDD 71
Query: 90 LLVVHSESYLKSLQSSPNVSIII---EVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKL 146
VH + YL+ LQ+ N S + E+P + + ++ F GGTI+AA++
Sbjct: 72 AATVHKKDYLQDLQT-LNFSRRVYRSELP---------LTKSIVDAFFLGTGGTIMAAEM 121
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
A + G A+N+ GGFHH AD GFC D+++ + Q I R +IIDLD HQGNG
Sbjct: 122 ALDYGRAMNLSGGFHHAFADHAEGFCYLNDVAIAVRVLQKQKRIKRALIIDLDVHQGNGT 181
Query: 207 EKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHT 266
K F V+ M YP + + +D + + S EYL L+ L +
Sbjct: 182 AKIFRHSRHVFTFSMHEEKNYP--IKEKGSLD--IGLDSAMHDEEYLNLLETNLMKVRKS 237
Query: 267 FDPELVIYNAGTDILEGDPLGMLKV 291
+ +LV + AG D E D LG L +
Sbjct: 238 YKADLVFFVAGVDPYENDRLGGLSI 262
>gi|337280109|ref|YP_004619581.1| histone deacetylase [Ramlibacter tataouinensis TTB310]
gi|334731186|gb|AEG93562.1| Histone deacetylase-like protein [Ramlibacter tataouinensis TTB310]
Length = 309
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 83/253 (32%), Positives = 122/253 (48%), Gaps = 32/253 (12%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F +K+ + L+ E L + + L AS +L + H+ Y++++
Sbjct: 17 HRFPMAKYQLLRDRLADE--LPGIRLAQALPASDGELALAHTPGYIQAISDG-------S 67
Query: 114 VPPVALFPNCLVQRKVLYPF--------RKQVGGTILAAKLAKERGWAINVGGGFHHCSA 165
V P +QR++ +P+ R+ VG TI A + A + G A N+ GG HH A
Sbjct: 68 VDP-------RIQREIGFPWSPAMAERARRSVGATISACRAAFQDGVAANIAGGTHHAYA 120
Query: 166 DEGGGFCAYADISLC-----IHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILD 220
D+GGGFC + D ++ + + RV I+DLD HQGNG + F D V+ L
Sbjct: 121 DKGGGFCVFNDAAVASRLMQAEWGRQRAKPLRVAIVDLDVHQGNGTARIFHGDPTVFTLS 180
Query: 221 MFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDI 280
+ +P E D V++ G +EYL L+ AL+ FDP LVIY AG D
Sbjct: 181 LHGQKNFPFRKEPS---DLDVDLPDGCGDDEYLSALEGALDELDRRFDPGLVIYLAGADP 237
Query: 281 LEGDPLGMLKVKW 293
EGD LG LK+ W
Sbjct: 238 HEGDRLGRLKLTW 250
>gi|410614773|ref|ZP_11325811.1| histone deacetylase family protein [Glaciecola psychrophila 170]
gi|410165622|dbj|GAC39700.1| histone deacetylase family protein [Glaciecola psychrophila 170]
Length = 298
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 131/265 (49%), Gaps = 28/265 (10%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+PL++ P Y S L + H F K+ I L++ G + N + P S +DL V
Sbjct: 2 IPLVFHPIY--SQLDLPVRHRFPVEKYQGIRDGLAAMGVANDNFHI-PTPISPKDLRQVF 58
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQ--------VGGTILAAKL 146
+ Y++ L + R++ +P+ Q VGGT+L A+L
Sbjct: 59 NPQYVQQLVDGT--------------LDGKAMRRIGFPWSAQLIQRTLTAVGGTVLTARL 104
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
A E G A+N+ GG+HH A+ G GFC + D+ L NI +V+I D D HQG+G
Sbjct: 105 ALEHGKALNLTGGYHHAFANYGSGFCLFNDLYLAALSMLKSPNIDKVLIFDCDVHQGDGT 164
Query: 207 EKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHT 266
K +++++Y + + +P ++ + ++ GT +EYL +D AL +A +T
Sbjct: 165 AKLAENNTQIYTVSLHAEKNFPY---RKQHSNMDFNLLKGTQDSEYLDTVDSALHLAINT 221
Query: 267 FDPELVIYNAGTDILEGDPLGMLKV 291
+ P+ VIY+AG DI D LG L +
Sbjct: 222 YQPDAVIYDAGVDIHIDDDLGHLHI 246
>gi|373456320|ref|ZP_09548087.1| histone deacetylase superfamily [Caldithrix abyssi DSM 13497]
gi|371717984|gb|EHO39755.1| histone deacetylase superfamily [Caldithrix abyssi DSM 13497]
Length = 311
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 125/257 (48%), Gaps = 12/257 (4%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
++YS DY + FD ++ +I L E L + I+ P E+L +VH++
Sbjct: 14 VVYSSDYIYGLPSVGDHQTFDIMRFKKIRDKLVEEKLLTRKNILRPYLCKYEELRLVHTD 73
Query: 97 SYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLA-KERGWAIN 155
YL+ LQ+ VS I+++ V LF +++ +R GGT+LA A K N
Sbjct: 74 EYLRKLQNPQYVSNILKLDAVNLFYESILEY-----YRAVTGGTLLATAYALKNNVPTFN 128
Query: 156 VGGGFHHCSADEGGGFCAYADISLCIHYAFVQLN-ISRVMIIDLDAHQGNGHEKDFSSDS 214
+GGG+HH D+ GFC DI++ I F QL R M+IDLD HQGNG F D+
Sbjct: 129 LGGGYHHAHPDKAEGFCLVNDIAIAIE-KFRQLQRAKRFMVIDLDYHQGNGTLLYFKDDA 187
Query: 215 RVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIY 274
V+ M E R + + + Y+ L++ L +F P++V Y
Sbjct: 188 DVFTFSMHGDTW----VEIDRPHNLDILLPHACDDATYMTILEKELPPVLESFKPQVVFY 243
Query: 275 NAGTDILEGDPLGMLKV 291
AG+D+ E D +G +K+
Sbjct: 244 VAGSDVYEKDAIGDMKL 260
>gi|408792422|ref|ZP_11204032.1| histone deacetylase family protein [Leptospira meyeri serovar
Hardjo str. Went 5]
gi|408463832|gb|EKJ87557.1| histone deacetylase family protein [Leptospira meyeri serovar
Hardjo str. Went 5]
Length = 278
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 108/213 (50%), Gaps = 11/213 (5%)
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVG 138
I+ P +A + DL +VH++ YL L S + S ++ + R ++ F VG
Sbjct: 25 ILLPKKAEEADLELVHTKEYLDDLFSYEHTS-------RTMYSELPLNRSIVESFMYGVG 77
Query: 139 GTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDL 198
GTI+A++L+K +A N+GGG+HH D+ GFC D+++ I +IIDL
Sbjct: 78 GTIMASELSKTSQFAFNMGGGYHHSFPDKAEGFCYLNDVAIAIRKQKETNPELNALIIDL 137
Query: 199 DAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDE 258
D HQGNG+ F D +V+ M +YP+ + + V + T +EYL L+
Sbjct: 138 DLHQGNGNSYIFQYDDKVFTFSMHQGNLYPK----KEVSNLDVNLEPNTKDDEYLTTLET 193
Query: 259 ALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+L FD ++ Y AG D E D LG LKV
Sbjct: 194 SLNQIRKEFDSNIIYYVAGADPYEDDSLGELKV 226
>gi|399018524|ref|ZP_10720701.1| deacetylase, histone deacetylase/acetoin utilization protein
[Herbaspirillum sp. CF444]
gi|398101438|gb|EJL91660.1| deacetylase, histone deacetylase/acetoin utilization protein
[Herbaspirillum sp. CF444]
Length = 280
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 93/175 (53%), Gaps = 11/175 (6%)
Query: 125 VQRKVLYPF--------RKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYAD 176
Q+++ +P+ R+ G TI A + A E+G A+N+ GG HH AD G GFC + D
Sbjct: 52 AQKEIGFPWSPEMVERSRRSAGATIAACRSAMEQGVAVNLAGGTHHAYADHGAGFCVFND 111
Query: 177 ISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRF 236
++ + +SRV ++DLD HQGNG ++D V+ L + YP + E
Sbjct: 112 AAVASRLMQAERRVSRVAVVDLDVHQGNGTASILANDDSVFTLSLHGERNYPFEKEQS-- 169
Query: 237 IDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
D V + G T EYL L +AL FDP+L+IY AG D EGD LG +K+
Sbjct: 170 -DLDVALPDGVTDVEYLSALQDALAQLMQRFDPQLIIYLAGADPHEGDRLGRMKL 223
>gi|443693723|gb|ELT95017.1| hypothetical protein CAPTEDRAFT_228874 [Capitella teleta]
Length = 308
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/257 (31%), Positives = 128/257 (49%), Gaps = 12/257 (4%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LP+I+ DY +S L + H F K+ + ++L + + + P E S E +VH
Sbjct: 6 LPIIHHHDY-VSTL--PRKHRFAMRKFHGVLEYLKRDQVITMKQVHSPDEVSHETAALVH 62
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAI 154
SE Y+ ++ E + + R+ R + GGT+L+ +LA+ERG A
Sbjct: 63 SEEYIHKF--FHGLTDAKEQRRTGFVWDEGLARRC----RLEAGGTLLSTQLARERGLAC 116
Query: 155 NVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDS 214
N GGG HH D G GFC D+++ YA + RV+I+DLD HQG+G K ++
Sbjct: 117 NTGGGTHHAFRDYGSGFCLINDMAIAAKYALKAGIVERVLIVDLDVHQGDGTAKILENEE 176
Query: 215 RVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIY 274
++ M + +P +E ++ D + + G +EYL L + L +F P++VIY
Sbjct: 177 CIFTFSMHSAKNFP--FEKQK-SDLDIALEDGLGDHEYLSILHDHLPSILQSFRPDMVIY 233
Query: 275 NAGTDILEGDPLGMLKV 291
+AG D D LG L +
Sbjct: 234 DAGVDPHVKDELGKLNL 250
>gi|303290877|ref|XP_003064725.1| histone deacetylase [Micromonas pusilla CCMP1545]
gi|226453751|gb|EEH51059.1| histone deacetylase [Micromonas pusilla CCMP1545]
Length = 385
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 123/262 (46%), Gaps = 19/262 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFL--DKNCIVEPLEASKEDLLV 92
LP++Y P Y S + H F + + + + L EG KN S+E+LL
Sbjct: 80 LPIVYHPSY--SKPALPTGHRFPMTVFKALYERLIREGVAVPGKNLFQPARAPSREELLA 137
Query: 93 VHSESYLKSLQSSP---NVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
H E+Y+ + S I +P + LV+R + +V GTIL A LA
Sbjct: 138 AHCETYVDAFCVGALDDGASRKIGLP----WSEDLVERTL-----HEVSGTILTADLALT 188
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKD 209
G A+N GG HH G GFC D+++ + + RV+I+DLD HQG+G
Sbjct: 189 CGMAMNTAGGTHHAHRAHGSGFCILNDLAVTAKRVLQRGAVERVLIVDLDVHQGDGTAAI 248
Query: 210 FSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDP 269
D RV++LD +P + + + + GT + Y+K ++E L F P
Sbjct: 249 VEDDDRVFVLDAHCADNFP---HKKATASRDIALAKGTGDDAYMKAVEEGLREVLEEFKP 305
Query: 270 ELVIYNAGTDILEGDPLGMLKV 291
+LV+Y+AG D+ E D LG L +
Sbjct: 306 QLVLYDAGVDVHEADALGGLSL 327
>gi|405971212|gb|EKC36062.1| hypothetical protein CGI_10022459 [Crassostrea gigas]
Length = 361
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 127/262 (48%), Gaps = 12/262 (4%)
Query: 30 IPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKED 89
+ I LP+I+ Y F H F K+ + +FL ++ + ++EP +
Sbjct: 47 MEINGLPIIHHDGYVCEF---PIRHRFAMRKFHGVLRFLKTDNVISMKQVLEPSAIDPDF 103
Query: 90 LLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
L +VH+ Y++ S N S+ + + +V R R + GGT+LA +LA E
Sbjct: 104 LKLVHTPDYVERFLSG-NTSVEEQRLTGFQWSTGIVSR-----CRLETGGTLLAGQLAME 157
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKD 209
G A + GGG HH G G+C D+++ F + + +V+I+DLD HQG+G
Sbjct: 158 HGIACSTGGGTHHAFPSHGAGYCLLNDLAVTAAVLFKECQVKKVLIVDLDVHQGDGTACI 217
Query: 210 FSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDP 269
FS + V+ M + YP ++ D V +V+G T +YL L L +F P
Sbjct: 218 FSDNCAVFTFSMHSEKNYPL---KKQMSDMDVGLVTGITDKDYLAHLHSYLPWLLESFRP 274
Query: 270 ELVIYNAGTDILEGDPLGMLKV 291
++V+Y+AG D E D LG L +
Sbjct: 275 DIVLYDAGVDPHEKDELGKLNL 296
>gi|260434634|ref|ZP_05788604.1| histone deacetylase family protein [Synechococcus sp. WH 8109]
gi|260412508|gb|EEX05804.1| histone deacetylase family protein [Synechococcus sp. WH 8109]
Length = 305
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/265 (31%), Positives = 126/265 (47%), Gaps = 24/265 (9%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LP++Y P Y + H F +K+ + Q L +G + + + PL ++ DL
Sbjct: 1 MPLPVVYHPHYSAP---LPSTHRFPMAKFRLLHQLLLEQGVVQADEVHRPLSIARRDLES 57
Query: 93 VHSESYLKSLQ----SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAK 148
VH Y ++ + P I +P A P LVQR L VGGT+L A+LA
Sbjct: 58 VHPRRYHEAFSRDRLTRPE-QRRIGLP--ATRP--LVQRTWL-----AVGGTLLTARLAL 107
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEK 208
+RG A ++ GG HH G GFC + D ++ + R++I+DLD HQG+G
Sbjct: 108 KRGLASHLAGGTHHAHPGFGSGFCIFNDCAVAARVLLGTGEVRRILIVDLDVHQGDGSAA 167
Query: 209 DFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV--VSGTTTNEYLKKLDEALEVAGHT 266
F D RV L + +P R +D +++ GT ++YL + + L A T
Sbjct: 168 CFQHDPRVTTLSVHAASNFP-----LRKVDGDIDIPLADGTNDDDYLAAIADRLPDALDT 222
Query: 267 FDPELVIYNAGTDILEGDPLGMLKV 291
P+LV+YNAG D D LG L +
Sbjct: 223 IAPDLVLYNAGVDPHRDDRLGRLDL 247
>gi|381393718|ref|ZP_09919437.1| histone deacetylase/AcuC/AphA family protein [Glaciecola punicea
DSM 14233 = ACAM 611]
gi|379330612|dbj|GAB54570.1| histone deacetylase/AcuC/AphA family protein [Glaciecola punicea
DSM 14233 = ACAM 611]
Length = 299
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/265 (31%), Positives = 127/265 (47%), Gaps = 28/265 (10%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+PL++ P Y S L + H F K+ I L + G + +N + P EDL V H
Sbjct: 2 IPLVFHPIY--SQLPLPPKHRFPIEKYQGIKDQLLANG-VSENAFLTPEAIPLEDLKVAH 58
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQ--------VGGTILAAKL 146
S Y+ S I R++ P+ +Q VGGT+L +KL
Sbjct: 59 SAKYVDSFIDGTISQKAI--------------RRLGMPWSQQFVKRTLHAVGGTVLTSKL 104
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
A E G A+N+ GG+HH +D G GFC + DI L + Q I +V+ D D HQG+G
Sbjct: 105 ALEHGLALNLTGGYHHAFSDFGSGFCVFNDIVLSATHMLKQEGIDKVLTFDCDVHQGDGT 164
Query: 207 EKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHT 266
S + +Y + + +P ++ D + G T +EYL ++ AL++A ++
Sbjct: 165 ALLASGNDAIYTVSLHCEKNFP---ARKQHSDLDFPLERGMTDDEYLYTVECALQLAFNS 221
Query: 267 FDPELVIYNAGTDILEGDPLGMLKV 291
P+ VIY+AG DI E D LG L +
Sbjct: 222 ASPDAVIYDAGVDIHESDDLGYLNI 246
>gi|440792258|gb|ELR13486.1| oxidoreductase, aldo/keto reductase superfamily protein
[Acanthamoeba castellanii str. Neff]
Length = 719
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 125/272 (45%), Gaps = 43/272 (15%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPF-----DSSKWGRICQFLSSEGFLDKNCIVEPLEASKE 88
K P++YS DYD ++ G+E+L P D G + Q L +G + + + P +KE
Sbjct: 435 KRPVVYSDDYDQNWWGLERLLPLPLTLQDRKYHGELAQGLVEKGVIKADQFIMPEVPTKE 494
Query: 89 DLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAK 148
DL +++ YL SL S ++ + P + FP+ ++ V + VGGT+LA+++A
Sbjct: 495 DLKEYNTQEYLTSLNQSRRLAEALGNPTLRYFPSLVIHTFVSGFMLEAVGGTVLASRVAL 554
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEK 208
ERGWAIN+GGGFHH SA G QG+G
Sbjct: 555 ERGWAINLGGGFHHASASSGS--------------------------------QGDGFVA 582
Query: 209 DFSSDSRVYILDMF--NPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHT 266
DF D VY++D P + R R V G EYL+ + +E A T
Sbjct: 583 DFGLDENVYLVDSHTDQPNGHKRSRAHVRGASLGVP-RQGMPKEEYLQWVATEVEKAITT 641
Query: 267 FDPELVIYNAG---TDILEGDPLGMLKVKWGV 295
F P +V Y +G TD +G+P L+ W V
Sbjct: 642 FRPHMVFYISGSSPTDPTQGNPPPNLREAWVV 673
>gi|418738197|ref|ZP_13294593.1| histone deacetylase family protein [Leptospira borgpetersenii
serovar Castellonis str. 200801910]
gi|410746371|gb|EKQ99278.1| histone deacetylase family protein [Leptospira borgpetersenii
serovar Castellonis str. 200801910]
Length = 270
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 111/213 (52%), Gaps = 11/213 (5%)
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVG 138
+ P A +DL +VH++ +LK+ S +++ + + ++++ F VG
Sbjct: 17 VYRPEPAKDKDLALVHTKEFLKNFFS-------LKITERTQYSELPLTKQIVQSFVLAVG 69
Query: 139 GTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDL 198
GTILA +L ++ + ++GGGFHH D GFC D ++ + +++ IDL
Sbjct: 70 GTILATELTQKYKFVYHIGGGFHHSMPDRAEGFCYLNDAAIAVKLYQRTYPGRKILFIDL 129
Query: 199 DAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDE 258
D HQGNG+ F DS V+ M +YP+ + + +D +E GT +YL+ L+E
Sbjct: 130 DLHQGNGNSVVFQEDSDVFTFSMHQENLYPK--KEKSGLDIPLE--EGTEDGKYLELLEE 185
Query: 259 ALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+L F P+L+ Y AG D EGD LG LK+
Sbjct: 186 SLHKIKSDFKPDLIFYIAGADPFEGDSLGDLKL 218
>gi|90420420|ref|ZP_01228327.1| putative histone deacetylase protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90335148|gb|EAS48901.1| putative histone deacetylase protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 300
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 119/260 (45%), Gaps = 16/260 (6%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LP+I+ P +D F + H F SK+ R+ + L +G + EP A + L + H
Sbjct: 3 LPIIHHPAFDADF---DAAHRFPMSKFSRLAEILVEDGLVAPGGYHEPAPAPQNWLRLAH 59
Query: 95 SESYLKSLQSSPNVSIIIEVPP-VALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWA 153
Y+ + + VPP + V KV R GGT+L A LA G A
Sbjct: 60 DPLYVDQV-------LFSAVPPQMEKAIGFRVDEKVALRSRCATGGTVLTAHLALVEGLA 112
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSD 213
N GG HH + D G GF + D+++ + RV+I+D D HQG+G + F ++
Sbjct: 113 CNTAGGSHHAARDCGAGFSVFNDVAVAASLLLADGDAGRVLIVDCDVHQGDGTARIFENE 172
Query: 214 SRVYILDMFNPGIYPRDYEARRF-IDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELV 272
RV+ L + R+Y R+ D V + GT +YL L AL P++V
Sbjct: 173 RRVFTLSLHG----ARNYPVRKAQSDLDVPLADGTGDADYLDALVPALAEGLRRSLPDIV 228
Query: 273 IYNAGTDILEGDPLGMLKVK 292
YNAG D E D LG L +
Sbjct: 229 FYNAGVDPHEDDRLGRLALS 248
>gi|113954553|ref|YP_729977.1| histone deacetylase [Synechococcus sp. CC9311]
gi|113881904|gb|ABI46862.1| histone deacetylase family protein [Synechococcus sp. CC9311]
Length = 304
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 118/264 (44%), Gaps = 26/264 (9%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
+PL+Y P Y + H F +K+ + + L+ G + PL A + L
Sbjct: 1 MAVPLVYHPAYSAP---LPSSHRFPMAKFRLLSEALTDLGLMTPQQWHRPLPAPRRWLET 57
Query: 93 VHSESYLKSL-------QSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK 145
VH SY ++ Q+ + + P LVQR L VGGT+L A+
Sbjct: 58 VHKRSYHEAFARGRLDRQAQRRIGLPATTP--------LVQRTWL-----AVGGTLLTAR 104
Query: 146 LAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
LA E G A ++ GG HH D G GFC + DI++ + + R+MI+DLD HQG+
Sbjct: 105 LALEHGVACHLAGGTHHAFPDYGSGFCIFNDIAVSARVLLEEGRLERLMIVDLDVHQGDA 164
Query: 206 HEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGH 265
F+ D RV+ +P ++ D + G Y+ + EAL
Sbjct: 165 TALIFADDPRVFTFSAHAASNFP---SRKQCSDCDLPFEDGVEDQAYVAAIGEALPSLLD 221
Query: 266 TFDPELVIYNAGTDILEGDPLGML 289
+F PELV+YNAG D D LG L
Sbjct: 222 SFKPELVLYNAGVDPHRDDRLGRL 245
>gi|294084024|ref|YP_003550781.1| histone deacetylase superfamily protein [Candidatus
Puniceispirillum marinum IMCC1322]
gi|292663596|gb|ADE38697.1| histone deacetylase superfamily [Candidatus Puniceispirillum
marinum IMCC1322]
Length = 304
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/260 (32%), Positives = 120/260 (46%), Gaps = 18/260 (6%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
L ++ PDYDI + H F S K+ R+ L +EG L + P+ A+ E L +H
Sbjct: 2 LHIVSHPDYDIP---LADGHRFPSRKFTRLISHLDAEGILAEFTHATPIPATIEALSQIH 58
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALF--PNCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
+Y+ S+ SI E V F L +R L P GT++ A+LA+E G
Sbjct: 59 DPNYVASIHDG---SITTEALRVLGFEWSEALARRSFLAP-----NGTLMTARLAREHGL 110
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
A + GG HH G GFC + DI+ I +V+I+D D HQG+G +
Sbjct: 111 ACHAAGGTHHAHYGHGAGFCVFNDIAFTAINLLRDPGIDQVLILDCDVHQGDGTARMLMD 170
Query: 213 DSRVYILDMFNPGIYPRDYEARRFI-DQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPEL 271
+ R + + YP AR+ I D +E+ G YL L + L P++
Sbjct: 171 EDRAVTVSLHCATNYP----ARKAISDFDIELDRGLDNEGYLAILADTLSKLAGVMRPDI 226
Query: 272 VIYNAGTDILEGDPLGMLKV 291
VIY+AG DI D LG L V
Sbjct: 227 VIYDAGVDIHIDDRLGYLNV 246
>gi|418720651|ref|ZP_13279847.1| histone deacetylase family protein [Leptospira borgpetersenii str.
UI 09149]
gi|410742925|gb|EKQ91670.1| histone deacetylase family protein [Leptospira borgpetersenii str.
UI 09149]
Length = 270
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 110/213 (51%), Gaps = 11/213 (5%)
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVG 138
+ P A +DL +VH++ +LK S +++ + + ++++ F VG
Sbjct: 17 VYRPEPAKDKDLALVHTKEFLKDFFS-------LKITERTQYSELPLTKQIVQSFVLAVG 69
Query: 139 GTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDL 198
GTILA +L ++ + ++GGGFHH D GFC D ++ + +++ IDL
Sbjct: 70 GTILATELTQKYKFVYHIGGGFHHSMPDRAEGFCYLNDAAIAVKLYQRTYPGRKILFIDL 129
Query: 199 DAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDE 258
D HQGNG+ F DS V+ M +YP+ + + +D +E GT +YL+ L+E
Sbjct: 130 DLHQGNGNSVVFQEDSDVFTFSMHQENLYPK--KEKSGLDIPLE--EGTEDGKYLELLEE 185
Query: 259 ALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+L F P+L+ Y AG D EGD LG LK+
Sbjct: 186 SLHKIKSDFKPDLIFYIAGADPFEGDSLGDLKL 218
>gi|359432950|ref|ZP_09223299.1| hypothetical protein P20652_1411 [Pseudoalteromonas sp. BSi20652]
gi|357920408|dbj|GAA59548.1| hypothetical protein P20652_1411 [Pseudoalteromonas sp. BSi20652]
Length = 302
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 127/267 (47%), Gaps = 29/267 (10%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPL+Y P+Y +F + H F SK+ + Q ++ G ++ N +VEP+ + E L ++H
Sbjct: 7 LPLVYHPNYSFNF---DPKHRFAMSKFAHLYQHVAELGLINNN-LVEPILGTPEPLELIH 62
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTILAAKL 146
E+Y+ L ++ + A+ R++ P+ K++ GT+ A+L
Sbjct: 63 CENYIHDLWNN-------RLDEKAM-------RRIGLPWSKELMARTFTAPQGTLQTARL 108
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
A + G A ++ GG HH D G G+C D++ ++ V+I DLD HQG+G
Sbjct: 109 ALKHGIACHLAGGTHHAHNDFGSGYCMVNDLAFTAQTLIESGEVTNVLIFDLDVHQGDGT 168
Query: 207 EKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHT 266
+ Y + +P A D + + + +EYL +DE L
Sbjct: 169 AAMLQHQAYAYTCSIHCEKNFPFRKSAS---DLDIGLANNMKDDEYLAIVDETLSYLLKE 225
Query: 267 FDPELVIYNAGTDILEGDPLGMLKVKW 293
+P LV+Y+AG DI +GD LG L + W
Sbjct: 226 LNPSLVLYDAGVDIWQGDGLGKLDISW 252
>gi|383937130|ref|ZP_09990540.1| histone deacetylase 11 [Rheinheimera nanhaiensis E407-8]
gi|383701793|dbj|GAB60631.1| histone deacetylase 11 [Rheinheimera nanhaiensis E407-8]
Length = 302
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 126/260 (48%), Gaps = 10/260 (3%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+ +IY Y+I + LHPFD K+ ++ L+ D + I P + + +L
Sbjct: 1 MKIIYHEQYNIDVGIFKFLHPFDGCKFSKVRAALN-----DADIIAPPGPIAADAILGSL 55
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAI 154
+E L+ + +E+P + + ++L P R V GT+ A +LA A
Sbjct: 56 NELLKIQLKDKAALCRALEIPKIPFLSFSWLDSRILSPMRWGVSGTLTACRLALGGDDAW 115
Query: 155 NVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLD---AHQGNGHEKDFS 211
N+ GG+HH S GFC Y DI++ ++ I + AH GNG+ + F
Sbjct: 116 NLAGGYHHASPHRMEGFCIYNDINISYQQLIASGELTADDNILIIDIDAHHGNGNARTFI 175
Query: 212 SDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPEL 271
+ +V +LD++N IYP D +RR ++ V + SGT YL KL AL+ +
Sbjct: 176 DNPKVTLLDVYNADIYPIDTISRRRVNIAVPLPSGTGGELYLNKLAAALDQLSTGYKLAF 235
Query: 272 VIYNAGTDILEGDPLGMLKV 291
V+ AGTD+L DPLG L++
Sbjct: 236 VV--AGTDVLATDPLGGLQL 253
>gi|388569916|ref|ZP_10156296.1| histone deacetylase [Hydrogenophaga sp. PBC]
gi|388262888|gb|EIK88498.1| histone deacetylase [Hydrogenophaga sp. PBC]
Length = 331
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 128/252 (50%), Gaps = 26/252 (10%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQS---SPNVSI 110
H F +K+ ++ + L+ E + + E L AS +L +VH+ +Y+ ++ S SP +
Sbjct: 17 HRFPMAKYAQLRERLARE--CPEVEMHEALPASDGELTLVHTPAYIDAVASGTLSPALQR 74
Query: 111 IIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK--LAKERGWAINVGGGFHHCSADEG 168
I P + + +R R+ VG T+ AA+ + + G A N+ GG HH AD+G
Sbjct: 75 EIGFP----WSTAMAERA-----RRSVGATLQAARRVMGQGGGLAANLAGGTHHAYADKG 125
Query: 169 GGFCAYADISLCIHYAFVQLNIS-------RVMIIDLDAHQGNGHEKDFSSDSRVYILDM 221
GGFC + D ++ + RV I+DLD HQGNG + F+ D+ V+ L +
Sbjct: 126 GGFCVFNDFAVAARLMQAEHARRHDRREPLRVAIVDLDVHQGNGTARIFAGDASVFTLSL 185
Query: 222 FNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDIL 281
+P E D VE+ G ++YL L+ AL+ F+PELV+Y AG D
Sbjct: 186 HGAKNFPFRKEPS---DLDVELPDGCADDDYLHALELALDELDRRFEPELVLYLAGADPH 242
Query: 282 EGDPLGMLKVKW 293
EGD LG LK+ +
Sbjct: 243 EGDRLGRLKLSF 254
>gi|116075072|ref|ZP_01472332.1| putative histone deacetylase/AcuC/AphA family protein
[Synechococcus sp. RS9916]
gi|116067269|gb|EAU73023.1| putative histone deacetylase/AcuC/AphA family protein
[Synechococcus sp. RS9916]
Length = 303
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 85/263 (32%), Positives = 125/263 (47%), Gaps = 24/263 (9%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPL+Y P Y + H F +K+ + Q L G + + I P+ S+ DL VH
Sbjct: 2 LPLVYHPLYSAP---LPSSHRFPMAKFHLLHQLLLDRGTVQEQQIHRPVSISRRDLEQVH 58
Query: 95 SESY-----LKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
Y L +L I + A P LVQR L VGGT+L A+LA E
Sbjct: 59 ERQYHQAFCLGTLTREQQRRIGLP----ATRP--LVQRTWL-----AVGGTLLTARLALE 107
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKD 209
G A ++ GG HH G GFC + D ++ Q + +V+++DLD HQG+G
Sbjct: 108 AGLACHLAGGTHHAHPGFGSGFCIFNDCAVAASVLLAQGMVRQVLVVDLDVHQGDGTAAC 167
Query: 210 FSSDSRVYILDMFNPGIYPRDYEARRFI-DQKVEVVSGTTTNEYLKKLDEALEVAGHTFD 268
F+SD RV+ L + +P R+ D + + TT + Y++ + + L
Sbjct: 168 FASDPRVFTLSVHAASNFP----LRKVCSDLDIPLDDHTTDHAYMEAIGDQLPELLERLQ 223
Query: 269 PELVIYNAGTDILEGDPLGMLKV 291
P+LV+YNAG D + D LG LK+
Sbjct: 224 PDLVLYNAGVDPHQDDRLGRLKL 246
>gi|297184109|gb|ADI20228.1| hypothetical protein [uncultured Sphingobacterium sp. EB080_L08E11]
Length = 300
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/244 (32%), Positives = 111/244 (45%), Gaps = 25/244 (10%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F SK+ + Q L EG L + P AS+ +L H Y +SL SI
Sbjct: 18 HRFPMSKYSLLPQQLLYEGTLTQENFFAPDLASETQVLRTHCPYYFQSLLDG---SI--- 71
Query: 114 VPPVALFPNCLVQRKVLYPFRKQV--------GGTILAAKLAKERGWAINVGGGFHHCSA 165
+ QRK+ +P+ Q+ GTI A E G ++N+ GG HH
Sbjct: 72 --------DGKAQRKIGFPWSAQLIERERTIGQGTIDNTSFAIENGCSLNIAGGTHHAFY 123
Query: 166 DEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
D G GFC DI L HYA +SR++++DLD HQGNG + DSR++ M
Sbjct: 124 DRGEGFCMLNDIMLAAHYALDYSGVSRILVVDLDVHQGNGTAAMAADDSRIFTFSMHGEK 183
Query: 226 IYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDP 285
YP E+ D + + YL L+E L+ PELV + +G D+LE D
Sbjct: 184 NYPYHKESS---DLDLPLPDYIEDKAYLSLLNETLDELFEKVHPELVFFQSGVDVLESDK 240
Query: 286 LGML 289
LG +
Sbjct: 241 LGRM 244
>gi|359687906|ref|ZP_09257907.1| deacetylase [Leptospira licerasiae serovar Varillal str. MMD0835]
gi|418750973|ref|ZP_13307259.1| histone deacetylase family protein [Leptospira licerasiae str.
MMD4847]
gi|418758793|ref|ZP_13314975.1| histone deacetylase family protein [Leptospira licerasiae serovar
Varillal str. VAR 010]
gi|384114695|gb|EIE00958.1| histone deacetylase family protein [Leptospira licerasiae serovar
Varillal str. VAR 010]
gi|404273576|gb|EJZ40896.1| histone deacetylase family protein [Leptospira licerasiae str.
MMD4847]
Length = 335
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 123/260 (47%), Gaps = 15/260 (5%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
+L L+Y P+Y++ LG H F + K+ I + + L ++P +E+L +V
Sbjct: 40 RLALVYHPEYNMD-LGP---HVFPARKYAMIYNQVKEDPKLSSLPALQPAPVGEEELSLV 95
Query: 94 HSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWA 153
H+ ++ + + ++ + + ++ F VGGTILA ++ + +
Sbjct: 96 HTPEFISDFMN-------LRYTDRTMYSELPLNQTMVRSFCLGVGGTILATEMTENYKYV 148
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSD 213
++GGGFHH D GFC D ++ + +V+ IDLD HQGNG+ K F D
Sbjct: 149 YHIGGGFHHSMPDRAEGFCYLNDAAIAAKLYLQKHPERKVLFIDLDLHQGNGNAKIFHGD 208
Query: 214 SRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVI 273
V+ M +YP+ ++ + V + G YL L++ LE F P+L+
Sbjct: 209 PSVWTFSMHQEDLYPKKEKS----NLDVPLDKGANDKTYLSSLEQGLEKIRKEFKPDLIY 264
Query: 274 YNAGTDILEGDPLGMLKVKW 293
Y AG D E D LG LK+ +
Sbjct: 265 YFAGADPFEDDSLGDLKLTF 284
>gi|37521188|ref|NP_924565.1| histone deacetylase family protein [Gloeobacter violaceus PCC 7421]
gi|35212184|dbj|BAC89560.1| histone deacetylase family protein [Gloeobacter violaceus PCC 7421]
Length = 303
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 123/260 (47%), Gaps = 14/260 (5%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
+LP +YSP Y+ + + H F K+ R+ +L ++G EP A E L +
Sbjct: 1 MELPFVYSPRYEAN---LPPAHRFPMGKFSRLHHYLLNQGVARPEQFWEPERAGWEWLTL 57
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVAL-FPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
VH+ Y+ + + E + L + LV+R VGGTIL A+LA G
Sbjct: 58 VHAPRYVADFCAG--ILSAQEFRRIGLPWSPALVERTC-----TAVGGTILTARLALRHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A N GG HH D G GFC + D+++ + + RV+I+DLD HQG+G F+
Sbjct: 111 LACNTCGGTHHAFPDFGSGFCIFNDLAVSARVLLAEGQVRRVLIVDLDVHQGDGTAWIFA 170
Query: 212 SDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPEL 271
+ V+ M +P ++ D V + G + YL+ L+E L T P+L
Sbjct: 171 DEPGVFTFSMHCEQNFP---GRKQRSDLDVPLPIGLDDDTYLRVLNEHLPGLIETVRPDL 227
Query: 272 VIYNAGTDILEGDPLGMLKV 291
V+Y+AG D D LG L +
Sbjct: 228 VLYDAGVDPHRSDKLGKLAL 247
>gi|392556279|ref|ZP_10303416.1| histone deacetylase [Pseudoalteromonas undina NCIMB 2128]
Length = 302
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 122/263 (46%), Gaps = 19/263 (7%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
LPL+Y P+Y SF + H F SK+ ++ Q + + G N I EP S E+L +V
Sbjct: 6 NLPLVYHPNYSFSF---DPKHRFVMSKFAQLHQHVKTLGLAGSN-ITEPPHGSVEELEIV 61
Query: 94 HSESYLKSLQSS---PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKER 150
H E+Y+ L + I +P + L+ R P GT+ A+LA +
Sbjct: 62 HCENYIHDLWHNRLDEKAMRRIGLP----WSQALMNRTFTAPL-----GTLQTARLALKN 112
Query: 151 GWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDF 210
G A ++ GG HH +D G GFC D++ ++ V+I DLD HQG+G
Sbjct: 113 GLACHLAGGTHHAHSDFGSGFCMVNDLAFTAQTLIQNREVTNVLIFDLDVHQGDGTAAML 172
Query: 211 SSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPE 270
S + + +P D + + + EYL +D+ L+ + +P+
Sbjct: 173 SHQPYAFTCSIHCEKNFPFRKSPS---DLDIGLANNMQDAEYLGIVDDTLQFLLNELNPD 229
Query: 271 LVIYNAGTDILEGDPLGMLKVKW 293
LV+Y+AG DI + D LG L + W
Sbjct: 230 LVLYDAGVDIWQEDGLGKLDISW 252
>gi|421092686|ref|ZP_15553418.1| histone deacetylase family protein [Leptospira borgpetersenii str.
200801926]
gi|410364537|gb|EKP15558.1| histone deacetylase family protein [Leptospira borgpetersenii str.
200801926]
gi|456889867|gb|EMG00737.1| histone deacetylase family protein [Leptospira borgpetersenii str.
200701203]
Length = 270
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 109/213 (51%), Gaps = 11/213 (5%)
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVG 138
+ P A +DL +VH++ +LK S +++ + + ++++ F VG
Sbjct: 17 VYRPEPAKDKDLALVHTKEFLKDFFS-------LKITERTQYSELPLTKQIVQSFVLAVG 69
Query: 139 GTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDL 198
GTILA +L ++ + ++GGGFHH D GFC D ++ + +++ IDL
Sbjct: 70 GTILATELTQKYKFVYHIGGGFHHSMPDRAEGFCYLNDAAIAVKLYQRTYPGRKILFIDL 129
Query: 199 DAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDE 258
D HQGNG+ F DS V+ M +YP+ + + +D +E GT +YL+ L E
Sbjct: 130 DLHQGNGNSVVFQEDSDVFTFSMHQENLYPK--KEKSGLDIPLE--EGTEDGKYLELLTE 185
Query: 259 ALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+L F P+L+ Y AG D EGD LG LK+
Sbjct: 186 SLHKIKSDFKPDLIFYIAGADPFEGDSLGDLKL 218
>gi|408373839|ref|ZP_11171532.1| deacetylase [Alcanivorax hongdengensis A-11-3]
gi|407766333|gb|EKF74777.1| deacetylase [Alcanivorax hongdengensis A-11-3]
Length = 313
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 122/260 (46%), Gaps = 18/260 (6%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPL+Y P+Y F G H F K+GR+ +L +G + P A L VH
Sbjct: 2 LPLVYHPEYSFPFPGA---HRFPMEKFGRLHGYLRGQGIATADNTFRPGRARPALLGRVH 58
Query: 95 SESYLKSL---QSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
Y+ ++ + + +P + LV+R + P GT+L A+LA ++G
Sbjct: 59 CPDYVSAVLENRLDDRARRRMGLP----WSEALVKRTCIAPM-----GTLLTAQLALKQG 109
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A ++ GG HH D G GFC + D++ + R++I D D HQG+G +
Sbjct: 110 LACHLAGGTHHAYRDFGSGFCLFNDLAFAARLLLDSAAVDRLLIFDCDVHQGDGTAAMLA 169
Query: 212 SDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPEL 271
+ R + + +P ++ D V + G T +YL + E L+ +P+L
Sbjct: 170 DEPRAFTCSIHCEKNFP---VRKQNSDLDVGLPPGMTDGDYLATVFETLDGLLDRVEPQL 226
Query: 272 VIYNAGTDILEGDPLGMLKV 291
V+Y+AG DI GDPLG L++
Sbjct: 227 VLYDAGVDIYAGDPLGRLQI 246
>gi|302384114|ref|YP_003819937.1| histone deacetylase [Brevundimonas subvibrioides ATCC 15264]
gi|302194742|gb|ADL02314.1| Histone deacetylase [Brevundimonas subvibrioides ATCC 15264]
Length = 313
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 118/258 (45%), Gaps = 20/258 (7%)
Query: 36 PLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHS 95
P++Y P Y ++ + H F K+ R+ Q L EG + + P AS + L VH
Sbjct: 9 PVVYHPAYSMA---LPPGHRFPMLKYARLAQVLEDEGLVGPEGLYTPEPASFDMLAAVHD 65
Query: 96 ESYLKSLQSS---PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
Y++ + + P V +I +P V R+V + VGGT++AA+LA G
Sbjct: 66 PGYVRQVLDAAVPPEVERVIGLP---------VTREVSDRVQAAVGGTLMAARLALRHGL 116
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
A N GG HH G GFC + DI++ I + +++DLD HQG+G F
Sbjct: 117 ACNTAGGSHHAGPKGGAGFCVFNDIAVAGRAMIDAGEIRQALVVDLDVHQGDGTASIFEH 176
Query: 213 DSRVYILDMFNPGIYPRDYEARRFI-DQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPEL 271
+ RV+ M ++Y RR D +++ T + YL L L +P+L
Sbjct: 177 EPRVFTFSMHG----EKNYPVRRGPSDLDIDLPDCTGDDAYLAALRSVLPGLLDRVEPDL 232
Query: 272 VIYNAGTDILEGDPLGML 289
V Y AG D D LG L
Sbjct: 233 VFYLAGVDPHGEDRLGRL 250
>gi|332532061|ref|ZP_08407944.1| putative histone deacetylase family protein [Pseudoalteromonas
haloplanktis ANT/505]
gi|332038402|gb|EGI74846.1| putative histone deacetylase family protein [Pseudoalteromonas
haloplanktis ANT/505]
Length = 302
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 125/267 (46%), Gaps = 29/267 (10%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPL+Y P+Y SF + H F SK+ + Q ++ G + N +VEP+ + E L +VH
Sbjct: 7 LPLVYHPNYSFSF---DPKHRFVMSKFAHLYQHVAELGLIGSN-LVEPILGTPEPLELVH 62
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTILAAKL 146
++Y++ L + + A+ R++ P+ K++ GT+ A+L
Sbjct: 63 CDNYIQDLWHN-------RLDEKAM-------RRIGLPWSKELMARTFTAAQGTLQTARL 108
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
A + G A ++ GG HH D G GFC D++ ++ V+I DLD HQG+G
Sbjct: 109 ALKHGIACHLAGGTHHAHNDFGSGFCMVNDLAFTTQTLIESGEVTNVLIFDLDVHQGDGT 168
Query: 207 EKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHT 266
Y + +P A D + + + +EYL +DE L
Sbjct: 169 AAMLQHQPYAYTCSIHCEKNFPFRKSAS---DLDIGLANNMKDDEYLAIVDETLSYLLKE 225
Query: 267 FDPELVIYNAGTDILEGDPLGMLKVKW 293
+P LV+Y+AG DI +GD LG L + W
Sbjct: 226 LNPSLVLYDAGVDIWQGDGLGKLDISW 252
>gi|315125963|ref|YP_004067966.1| histone deacetylase [Pseudoalteromonas sp. SM9913]
gi|315014477|gb|ADT67815.1| histone deacetylase protein [Pseudoalteromonas sp. SM9913]
Length = 302
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 123/263 (46%), Gaps = 19/263 (7%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
LPL+Y P+Y SF + H F SK+ ++ Q + + G N I+EP S E+L +V
Sbjct: 6 NLPLVYHPNYSFSF---DPKHRFVMSKFAQLHQHVKTLGLAGSN-IIEPPHGSVEELEIV 61
Query: 94 HSESYLKSLQSS---PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKER 150
H E+Y+ L + I +P + L+ R P GT+ A+LA +
Sbjct: 62 HCENYIHDLWHNRLDEKAMRRIGLP----WSQALMNRTFTAPL-----GTLQTARLALKN 112
Query: 151 GWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDF 210
G A ++ GG HH +D G GFC D++ ++ V+I DLD HQG+G
Sbjct: 113 GLACHLAGGTHHAHSDFGSGFCMVNDLAYTAQTLIQNREVTNVLIFDLDVHQGDGTAAML 172
Query: 211 SSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPE 270
+ + + +P D + + + EYL +D+ L+ + +P+
Sbjct: 173 AHQPYAFTCSIHCEKNFPFRKSPS---DLDIGLANNMQDAEYLGIVDDTLQFLLNELNPD 229
Query: 271 LVIYNAGTDILEGDPLGMLKVKW 293
LV+Y+AG DI + D LG L + W
Sbjct: 230 LVLYDAGVDIWQEDGLGKLDISW 252
>gi|218295840|ref|ZP_03496620.1| histone deacetylase superfamily [Thermus aquaticus Y51MC23]
gi|218243578|gb|EED10106.1| histone deacetylase superfamily [Thermus aquaticus Y51MC23]
Length = 293
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/241 (33%), Positives = 118/241 (48%), Gaps = 21/241 (8%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQS---SPNVSI 110
HPF K+ + + L +G + I+ E +E L + H SYL+ L S S+
Sbjct: 17 HPFPLYKYRGVAEAL--KGLV---PILPAPEVPREALFLAHEASYLEKLFREGLSRQESL 71
Query: 111 IIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGG 170
+ +P F L++R + GGT++AA+ A G +N+ GG HH D G
Sbjct: 72 RLGLP----FGPGLLKRAL-----HAAGGTLMAAEDALRTGLGLNLAGGTHHAFPDRAEG 122
Query: 171 FCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRD 230
+ + D+++ + + + RV+++DLDAHQGNG F D VY L + YP
Sbjct: 123 YSLFNDVAVAVRWLRARGFWGRVLVVDLDAHQGNGTAFFFRDDPTVYTLSLHGERNYPLK 182
Query: 231 YEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLK 290
E D V + G YL+ LDEALE A F P LV YNAG D+L+GD G L
Sbjct: 183 KEKG---DLDVGLPDGVGDEAYLRALDEALEKA-EAFRPHLVFYNAGVDVLKGDRFGRLA 238
Query: 291 V 291
+
Sbjct: 239 L 239
>gi|359437703|ref|ZP_09227758.1| histone deacetylase [Pseudoalteromonas sp. BSi20311]
gi|359445306|ref|ZP_09235050.1| hypothetical protein P20439_1372 [Pseudoalteromonas sp. BSi20439]
gi|358027642|dbj|GAA64007.1| histone deacetylase [Pseudoalteromonas sp. BSi20311]
gi|358040872|dbj|GAA71299.1| hypothetical protein P20439_1372 [Pseudoalteromonas sp. BSi20439]
Length = 302
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 122/263 (46%), Gaps = 19/263 (7%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
LPL+Y P+Y SF + H F SK+ ++ Q + + G N I EP S E+L +V
Sbjct: 6 NLPLVYHPNYSFSF---DPKHRFVMSKFAQLHQHVKTLGLAGSN-ITEPPHGSVEELEIV 61
Query: 94 HSESYLKSLQSS---PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKER 150
H E+Y+ L + I +P + L+ R P GT+ A+LA +
Sbjct: 62 HCENYIHDLWHNRLDEKAMRRIGLP----WSQALMNRTFTAPL-----GTLQTARLALKN 112
Query: 151 GWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDF 210
G A ++ GG HH +D G GFC D++ ++ V+I DLD HQG+G
Sbjct: 113 GLACHLAGGTHHAHSDFGSGFCMVNDLAFTAQTLIQNREVTNVLIFDLDVHQGDGTAAML 172
Query: 211 SSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPE 270
+ + + +P D + + + EYL +D+ L+ + +P+
Sbjct: 173 AHQPYAFTCSIHCEKNFPFRKSPS---DLDIGLANNMQDAEYLGIVDDTLQFLLNELNPD 229
Query: 271 LVIYNAGTDILEGDPLGMLKVKW 293
LV+Y+AG DI + D LG L + W
Sbjct: 230 LVLYDAGVDIWQEDGLGKLDISW 252
>gi|254456264|ref|ZP_05069693.1| histone deacetylase family protein [Candidatus Pelagibacter sp.
HTCC7211]
gi|207083266|gb|EDZ60692.1| histone deacetylase family protein [Candidatus Pelagibacter sp.
HTCC7211]
Length = 297
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/263 (33%), Positives = 135/263 (51%), Gaps = 25/263 (9%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
+LP++ DY ++ +G + H F +K+G + ++L + + KN P+ S E L
Sbjct: 2 ELPVVNHKDY-VAKIGDD--HKFPINKFGELAKYLIEQKVV-KN-FFNPVACSFETLNRA 56
Query: 94 HSESYLKSLQSSP---NVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKER 150
HSE Y+ +++ N I P V + +VQR ++ GGT+LA+KLA
Sbjct: 57 HSEDYIHDIKNKTLDKNKIKKIGFPLV----DSVVQRSLV-----ATGGTVLASKLALNY 107
Query: 151 GWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDF 210
G A N GG HH + D G G+C + D+++ HY + +R++I+DLD HQGNG+ + F
Sbjct: 108 GIACNTAGGSHHANYDSGAGYCVFNDVAVAAHYLLDKGFANRILIVDLDVHQGNGNSEIF 167
Query: 211 SSDSRVYILDMFNPGIYPRDYEARRFI-DQKVEVVSGTTTNEYLKKLDEAL-EVAGHTFD 268
+ V+ M + YP A++ I D VE+ + Y+K L L E+ FD
Sbjct: 168 KYNRHVFTFSMHSKTNYP----AKKSISDLDVELEDNLEDDVYIKTLKFYLNELNNENFD 223
Query: 269 PELVIYNAGTDILEGDPLGMLKV 291
V Y AG DI D LG LK+
Sbjct: 224 --FVFYIAGVDIHFNDRLGKLKI 244
>gi|421098269|ref|ZP_15558940.1| histone deacetylase family protein [Leptospira borgpetersenii str.
200901122]
gi|410798537|gb|EKS00626.1| histone deacetylase family protein [Leptospira borgpetersenii str.
200901122]
Length = 270
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 110/213 (51%), Gaps = 11/213 (5%)
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVG 138
+ +P A +DL +VH++ +LK S +++ + + ++++ F VG
Sbjct: 17 VYKPEPAKDKDLALVHTKEFLKDFFS-------LKITERTQYSELPLTKQIVQSFVLAVG 69
Query: 139 GTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDL 198
GTILA +L ++ + ++GGGFHH D GFC D ++ + +++ IDL
Sbjct: 70 GTILATELTEKYKFVYHIGGGFHHSMPDRAEGFCYLNDAAIAVKLYQRTYPGRKILFIDL 129
Query: 199 DAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDE 258
D HQGNG+ F DS V+ M +YP+ + + +D +E GT +YL+ L E
Sbjct: 130 DLHQGNGNSVVFQEDSDVFTFSMHQENLYPK--KEKSGLDIPLE--EGTDDGKYLELLVE 185
Query: 259 ALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+L F P+L+ Y AG D EGD LG LK+
Sbjct: 186 SLRKIESDFKPDLIFYIAGADPFEGDSLGDLKL 218
>gi|359440503|ref|ZP_09230417.1| hypothetical protein P20429_0778 [Pseudoalteromonas sp. BSi20429]
gi|358037538|dbj|GAA66666.1| hypothetical protein P20429_0778 [Pseudoalteromonas sp. BSi20429]
Length = 302
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 125/267 (46%), Gaps = 29/267 (10%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPL+Y P+Y +F + H F SK+ + Q ++ G + N +VEP+ + E L ++H
Sbjct: 7 LPLVYHPNYSFNF---DPKHRFAMSKFAHLYQHVAKLGLIGDN-LVEPILGTPEPLELIH 62
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTILAAKL 146
E+Y+ L ++ + A+ R++ P+ K++ GT+ A+L
Sbjct: 63 CENYIHDLWNN-------RLDEKAM-------RRIGLPWSKELMARTFTAPQGTLQTARL 108
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
A + G A ++ GG HH D G G+C D++ ++ V+I DLD HQG+G
Sbjct: 109 ALKHGIACHLAGGTHHAHTDFGSGYCMVNDLAFTTQTLIESGEVTNVLIFDLDVHQGDGT 168
Query: 207 EKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHT 266
+ Y + +P A D V + +EYL +D+ L
Sbjct: 169 AAMLEHQAYAYTCSIHCEKNFPFRKSAS---DLDVGLADNMKDDEYLAVVDDTLSYLLKE 225
Query: 267 FDPELVIYNAGTDILEGDPLGMLKVKW 293
+P LV+Y+AG DI +GD LG L + W
Sbjct: 226 LNPSLVLYDAGVDIWQGDGLGKLDISW 252
>gi|418695445|ref|ZP_13256465.1| histone deacetylase family protein [Leptospira kirschneri str. H1]
gi|421108114|ref|ZP_15568658.1| histone deacetylase family protein [Leptospira kirschneri str. H2]
gi|409956899|gb|EKO15820.1| histone deacetylase family protein [Leptospira kirschneri str. H1]
gi|410006815|gb|EKO60552.1| histone deacetylase family protein [Leptospira kirschneri str. H2]
Length = 271
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 110/215 (51%), Gaps = 11/215 (5%)
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVG 138
I +P A +DL +VH++ +L S +++ + + +++++ F VG
Sbjct: 17 IYKPDLAKTKDLSLVHTQEFLDDFFS-------LKITERTQYSELPLTKQIVHSFVLAVG 69
Query: 139 GTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDL 198
GTIL+ +L ++ + ++GGGFHH D GFC D ++ + +++ IDL
Sbjct: 70 GTILSMELTQKYKFVYHIGGGFHHSMPDRAEGFCYLNDAAIASKLYQKEYPGKKILFIDL 129
Query: 199 DAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDE 258
D HQGNG+ F D V+ M +YP+ ++ D + + GT EYL+ L++
Sbjct: 130 DLHQGNGNSFIFQDDPDVFTFSMHQENLYPKKEKS----DLDISLEEGTDDKEYLELLEK 185
Query: 259 ALEVAGHTFDPELVIYNAGTDILEGDPLGMLKVKW 293
+L F P+L+ Y AG D EGD LG LK+ +
Sbjct: 186 SLHKIESDFKPDLIFYIAGADPFEGDSLGDLKLTF 220
>gi|114705872|ref|ZP_01438775.1| histone deacetylase family protein [Fulvimarina pelagi HTCC2506]
gi|114538718|gb|EAU41839.1| histone deacetylase family protein [Fulvimarina pelagi HTCC2506]
Length = 300
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 117/258 (45%), Gaps = 14/258 (5%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LP+++ P +D F ++ H F SK+ R+ + L +G N P A L + H
Sbjct: 3 LPIVHHPAFDARF---DEAHRFPMSKFSRLAKILKEDGLDGPNGFYVPAPALPGWLQLAH 59
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFP-NCLVQRKVLYPFRKQVGGTILAAKLAKERGWA 153
Y+ + + VPP +V V R GGT+L A+LA G A
Sbjct: 60 DARYVDQVLGA-------NVPPATEKAIGFVVDPAVALRSRTATGGTVLTARLALGEGLA 112
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSD 213
N GG HH SA G GF + D+++ ++ R++I+D D HQG+G + F D
Sbjct: 113 CNTAGGSHHASATGGAGFSVFNDVAVAAKVLLADGDVDRILIVDCDVHQGDGTARIFEGD 172
Query: 214 SRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVI 273
SRV+ + YP +A +D + +G T YL+ L AL+ A P+
Sbjct: 173 SRVFTFSVHGEKNYPA-VKANSDLDLSLPDRTGDTA--YLEALIPALDQAFEQAKPDFAF 229
Query: 274 YNAGTDILEGDPLGMLKV 291
+NAG D D LG L +
Sbjct: 230 FNAGVDPHTDDRLGRLSL 247
>gi|410697943|gb|AFV77011.1| deacetylase, histone deacetylase/acetoin utilization protein
[Thermus oshimai JL-2]
Length = 293
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 118/242 (48%), Gaps = 23/242 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPL-EASKEDLLVVHSESYLKSLQS---SPNVS 109
HPF K+ + + L G L ++EP E KE L + H YL+ + S S
Sbjct: 17 HPFPLYKYRGVAEAL--RGLL----LLEPAPEVPKEALFLAHDPLYLERVFREGLSRKES 70
Query: 110 IIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGG 169
+ + +P F ++R + GGT++AA A E G +N+ GG HH D
Sbjct: 71 LRLGLP----FTPAFLRRAL-----HAAGGTLMAALDALEEGLGLNLAGGTHHAFPDRAE 121
Query: 170 GFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPR 229
G+ + D+++ + + + RV+++DLDAHQGNG F D VY L + YP
Sbjct: 122 GYSLFNDVAVAVAWLRRRGFSGRVLVLDLDAHQGNGTAVFFGQDPTVYTLSLHGERNYPL 181
Query: 230 DYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGML 289
E D V + G YL+ L+EALE AG F P LV YNAG D+L+GD G L
Sbjct: 182 KKERS---DLDVGLPDGVGDGAYLRALEEALEKAG-AFRPALVFYNAGVDVLKGDRFGRL 237
Query: 290 KV 291
+
Sbjct: 238 SL 239
>gi|52545875|emb|CAH56375.1| hypothetical protein [Homo sapiens]
gi|119584562|gb|EAW64158.1| histone deacetylase 11, isoform CRA_b [Homo sapiens]
Length = 236
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 66/95 (69%)
Query: 48 LGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPN 107
+G+EKLHPFD+ KWG++ FL E L + +VE EAS+EDLLVVH+ YL L+ S
Sbjct: 1 MGLEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEAREASEEDLLVVHTRRYLNELKWSFA 60
Query: 108 VSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTIL 142
V+ I E+PPV PN LVQRKVL P R Q GGTI+
Sbjct: 61 VATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIM 95
>gi|418668158|ref|ZP_13229562.1| histone deacetylase family protein [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
gi|410756191|gb|EKR17817.1| histone deacetylase family protein [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
Length = 271
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 110/215 (51%), Gaps = 11/215 (5%)
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVG 138
I +P A +DL +VH++ +L S + + + + +++++ F VG
Sbjct: 17 IYKPDLAKTKDLSLVHTQEFLDDFFS-------LNITERTQYSELPLTKQIVHSFVLAVG 69
Query: 139 GTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDL 198
GTIL+ +LA++ + ++GGGFHH D GFC D ++ + +++ IDL
Sbjct: 70 GTILSMELAQKYKFVYHIGGGFHHSMPDRAEGFCYLNDAAIASKLYQKEYPDKKILFIDL 129
Query: 199 DAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDE 258
D HQGNG+ F +D V+ M +YP+ ++ D + + G EYL+ L++
Sbjct: 130 DLHQGNGNSFIFQNDPDVFTFSMHQENLYPKKEKS----DLDISLEEGIGDKEYLELLEK 185
Query: 259 ALEVAGHTFDPELVIYNAGTDILEGDPLGMLKVKW 293
+L F P+L+ Y AG D EGD LG LK+ +
Sbjct: 186 SLRKIESDFKPDLIFYIAGADPFEGDSLGDLKLTF 220
>gi|359728114|ref|ZP_09266810.1| deacetylase [Leptospira weilii str. 2006001855]
gi|417781407|ref|ZP_12429159.1| histone deacetylase family protein [Leptospira weilii str.
2006001853]
gi|410778658|gb|EKR63284.1| histone deacetylase family protein [Leptospira weilii str.
2006001853]
Length = 270
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 109/213 (51%), Gaps = 11/213 (5%)
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVG 138
+ +P A +DL +VH++ +LK S +++ + + ++++ F VG
Sbjct: 17 VYKPEPARDKDLALVHTKEFLKDFFS-------LKITERTQYSELPLTKQIVQSFVLAVG 69
Query: 139 GTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDL 198
GTILA +L + + ++GGGFHH D GFC D ++ + +++ IDL
Sbjct: 70 GTILATELTGKYKFVYHIGGGFHHSMPDRAEGFCYLNDAAIAVKLYQKAYPGRKILFIDL 129
Query: 199 DAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDE 258
D HQGNG+ F DS V+ M +YP+ + + +D +E GT +YL+ L E
Sbjct: 130 DLHQGNGNSVIFQEDSNVFTFSMHQENLYPK--KEKSGLDIPLE--EGTDDGKYLELLLE 185
Query: 259 ALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+L F P+L+ Y AG D EGD LG LK+
Sbjct: 186 SLRKIESDFKPDLIFYIAGADPFEGDSLGDLKL 218
>gi|410619155|ref|ZP_11330068.1| histone deacetylase family protein [Glaciecola polaris LMG 21857]
gi|410161283|dbj|GAC34206.1| histone deacetylase family protein [Glaciecola polaris LMG 21857]
Length = 299
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 128/267 (47%), Gaps = 28/267 (10%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
+PL++ P Y S L + H F K+ I L G + + +P S L
Sbjct: 1 MSIPLVFHPIY--SQLDLPHRHRFPIEKYQAIYDRLIDSG-IPSSQFHQPQALSPTQLAR 57
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQ--------VGGTILAA 144
V+S Y+ +L ++E + R++ +P+ Q V GT+L +
Sbjct: 58 VYSPEYVNALTQG-----VLESKAM---------RRIGFPWSAQLIERSLTAVAGTVLTS 103
Query: 145 KLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
LA E G A+N+ GG+HH A+ G GFC + D+ L NI +V+I D D HQG+
Sbjct: 104 SLAIEHGKALNLTGGYHHAFANFGSGFCLFNDLYLAALNMLQTPNIDKVLIFDCDVHQGD 163
Query: 205 GHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAG 264
G K +++ +V+ + + +P ++ D + GT+ NEYL+ ++ AL +A
Sbjct: 164 GTAKLAANNPKVFTVSIHGEKNFPLR---KQISDMDFALAKGTSDNEYLEVVESALNLAF 220
Query: 265 HTFDPELVIYNAGTDILEGDPLGMLKV 291
F P+ VIY+AG DI D LG L +
Sbjct: 221 TAFQPDAVIYDAGVDIHINDDLGHLHI 247
>gi|78185032|ref|YP_377467.1| histone deacetylase/AcuC/AphA family protein [Synechococcus sp.
CC9902]
gi|78169326|gb|ABB26423.1| putative histone deacetylase/AcuC/AphA family protein
[Synechococcus sp. CC9902]
Length = 305
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 121/260 (46%), Gaps = 20/260 (7%)
Query: 36 PLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHS 95
P++Y P Y + H F +K+ + Q L +G +++ I PL ++ DL +H
Sbjct: 4 PVVYHPRYSAE---LPSTHRFPMAKFKLLHQLLLDQGLIERKQIHVPLSIARRDLEEIHP 60
Query: 96 ESYLKSL---QSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
Y ++ Q + I +P + LVQR L VGGT+L A+LA G
Sbjct: 61 RRYHETFSRDQLTRPEQRRIGLPATS----ALVQRTWL-----AVGGTLLTARLALRYGL 111
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
A ++ GG HH D G GFC + D ++ + + R++I+DLD HQG+G F +
Sbjct: 112 ANHLAGGTHHAHPDFGSGFCIFNDCAVAAKVLLRRREVERILIVDLDVHQGDGSAACFQT 171
Query: 213 DSRVYILDMFNPGIYP-RDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPEL 271
D RV + +P R + D + + GT +YL + + L P+L
Sbjct: 172 DERVTTFSVHAASNFPLRKVNS----DIDIPLPDGTEDGDYLAAIGDQLPNVLDELKPQL 227
Query: 272 VIYNAGTDILEGDPLGMLKV 291
V++NAG D D LG L +
Sbjct: 228 VLFNAGVDPHRDDRLGRLHL 247
>gi|359452419|ref|ZP_09241768.1| hypothetical protein P20495_0507 [Pseudoalteromonas sp. BSi20495]
gi|358050552|dbj|GAA78017.1| hypothetical protein P20495_0507 [Pseudoalteromonas sp. BSi20495]
Length = 302
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 123/267 (46%), Gaps = 29/267 (10%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPL+Y P+Y SF + H F SK+ + Q + G + N +VEP+ + L ++H
Sbjct: 7 LPLVYHPNYSFSF---DPKHRFAMSKFAHLYQHVEELGLIGDN-LVEPILGTPAPLELIH 62
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTILAAKL 146
E+Y+ L ++ + A+ R++ P+ K++ GT+ A+L
Sbjct: 63 CENYIHDLWNN-------RLDEKAM-------RRIGLPWSKKLMARTFTAPQGTLQTARL 108
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
A + G A ++ GG HH D G G+C D++ ++ V+I DLD HQG+G
Sbjct: 109 ALKHGIACHLAGGTHHAHTDFGSGYCMVNDLAFTTQTLIESGEVTNVLIFDLDVHQGDGT 168
Query: 207 EKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHT 266
+ Y + +P A D + + +EYL +DE L
Sbjct: 169 AAMLQHQAYAYTCSIHCEKNFPFRKSAS---DLDIGLTDNMKDDEYLAIVDETLSYLLKE 225
Query: 267 FDPELVIYNAGTDILEGDPLGMLKVKW 293
+P LV+Y+AG DI +GD LG L + W
Sbjct: 226 LNPSLVLYDAGVDIWQGDGLGKLDISW 252
>gi|87123802|ref|ZP_01079652.1| putative histone deacetylase/AcuC/AphA family protein
[Synechococcus sp. RS9917]
gi|86168371|gb|EAQ69628.1| putative histone deacetylase/AcuC/AphA family protein
[Synechococcus sp. RS9917]
Length = 304
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 123/260 (47%), Gaps = 18/260 (6%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LP++Y P Y + H F +K+ + L G++ + + P+ ++ DL +H
Sbjct: 3 LPIVYHPRYSTP---LPSSHRFPMAKFRLLHDLLLERGWIRPDAVKRPVSIARRDLERIH 59
Query: 95 SESYLKSL---QSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
SY ++ Q I +P + LVQR L VGGT+L A+LA G
Sbjct: 60 DRSYHQAFSRGQLGRAEQRRIGLP----NSHALVQRTWL-----AVGGTLLTARLALRHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A ++ GG HH G GFC + D ++ + + R+M++DLD HQG+G F+
Sbjct: 111 IASHLAGGTHHAHPGYGSGFCIFNDCAVTAAVLLAEGAVKRLMVVDLDVHQGDGTAACFA 170
Query: 212 SDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPEL 271
+D RV+ L + +P + R +D + + GT YL + + L T P+L
Sbjct: 171 TDPRVFTLSVHAQSNFPL-RKGRSDLD--LPLADGTDDATYLSTIGDRLPDRLDTVRPDL 227
Query: 272 VIYNAGTDILEGDPLGMLKV 291
V+YNAG D D LG L +
Sbjct: 228 VLYNAGVDPHRNDRLGRLAL 247
>gi|421090451|ref|ZP_15551243.1| histone deacetylase family protein [Leptospira kirschneri str.
200802841]
gi|410000665|gb|EKO51293.1| histone deacetylase family protein [Leptospira kirschneri str.
200802841]
Length = 271
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 109/215 (50%), Gaps = 11/215 (5%)
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVG 138
I +P A +DL +VH++ +L S +++ + + +++++ F VG
Sbjct: 17 IYKPDLAKTKDLSLVHTQEFLDDFFS-------LKITERTQYSELPLTKQIVHSFVLAVG 69
Query: 139 GTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDL 198
GTIL+ +L ++ + ++GGGFHH D GFC D ++ + +++ IDL
Sbjct: 70 GTILSMELTQKYKFVYHIGGGFHHSMPDRAEGFCYLNDAAIASKLYQKEYPGKKILFIDL 129
Query: 199 DAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDE 258
D HQGNG+ F D V+ M +YP+ ++ D + + GT EYL+ L +
Sbjct: 130 DLHQGNGNSFVFQDDPDVFTFSMHQENLYPKKEKS----DLDISLEEGTDDKEYLELLKK 185
Query: 259 ALEVAGHTFDPELVIYNAGTDILEGDPLGMLKVKW 293
+L F P+L+ Y AG D EGD LG LK+ +
Sbjct: 186 SLHKIESDFKPDLIFYIAGADPFEGDSLGDLKLTF 220
>gi|88799789|ref|ZP_01115363.1| Deacetylase, including yeast histone deacetylase and acetoin
utilization protein [Reinekea blandensis MED297]
gi|88777523|gb|EAR08724.1| Deacetylase, including yeast histone deacetylase and acetoin
utilization protein [Reinekea sp. MED297]
Length = 306
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 128/262 (48%), Gaps = 18/262 (6%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
KLPLIY P Y F + H F K+ R+ L + G L + P A++ + +
Sbjct: 1 MKLPLIYHPGYSPEF---DANHRFPMEKFARLYDRLENIGLLRHCELFRPEPANEATIRL 57
Query: 93 VHSESYL---KSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
H Y+ + Q S I +P + +++R L VGG++L+ +LA E
Sbjct: 58 AHHPDYVTGYRDNQLSAKAMRRIGLP----WSEGVMRRTFL-----AVGGSLLSTELALE 108
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKD 209
RG A ++ GG HH EG GFC + D+++C +A + I RV+IID D HQG+G +
Sbjct: 109 RGLAAHLAGGTHHAHYQEGSGFCIFNDLAICARHALTKPGIDRVLIIDTDVHQGDGTARI 168
Query: 210 FSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDP 269
+D + + +P +A D +++ SG T YL + + +P
Sbjct: 169 LDNDPDILTVSFHCRQNFPA-RKAHSNWDFELDHQSGDQT--YLNLVHRHIPYLLDITEP 225
Query: 270 ELVIYNAGTDILEGDPLGMLKV 291
+LV+Y+AG D+ + D LG+L +
Sbjct: 226 DLVLYDAGADVHQDDALGLLNL 247
>gi|414069842|ref|ZP_11405833.1| Deacetylase [Pseudoalteromonas sp. Bsw20308]
gi|410807805|gb|EKS13780.1| Deacetylase [Pseudoalteromonas sp. Bsw20308]
Length = 302
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 123/267 (46%), Gaps = 29/267 (10%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPL+Y P+Y SF + H F SK+ + Q + G + N +VEP+ + L ++H
Sbjct: 7 LPLVYHPNYSFSF---DPKHRFAMSKFAHLYQHVEELGLIGDN-LVEPILGTPAPLELIH 62
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTILAAKL 146
E+Y+ L ++ + A+ R++ P+ K++ GT+ A+L
Sbjct: 63 CENYIHDLWNN-------RLDEKAM-------RRIGLPWSKKLMARTFTAPQGTLQTARL 108
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
A + G A ++ GG HH D G G+C D++ ++ V+I DLD HQG+G
Sbjct: 109 ALKHGIACHLAGGTHHAHTDFGSGYCMVNDLAFTTQTLIESGEVTNVLIFDLDVHQGDGT 168
Query: 207 EKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHT 266
+ Y + +P A D + + +EYL +DE L
Sbjct: 169 AAMLQHQAYAYTCSIHCEKNFPFRKSAS---DLDIGLTDNMKDDEYLAIVDETLSYLLKE 225
Query: 267 FDPELVIYNAGTDILEGDPLGMLKVKW 293
+P LV+Y+AG DI +GD LG L + W
Sbjct: 226 LNPSLVLYDAGVDIWQGDGLGKLDISW 252
>gi|113867397|ref|YP_725886.1| histone deacetylase family deacetylase [Ralstonia eutropha H16]
gi|113526173|emb|CAJ92518.1| Deacetylase, histone deacetylase family [Ralstonia eutropha H16]
Length = 369
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 104/221 (47%), Gaps = 25/221 (11%)
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPF----- 133
+VE A + LL+ H+ Y+++ + + QR++ +P+
Sbjct: 103 LVEAPRAGDDALLLAHTPGYVQAASAGTL--------------DAARQREIGFPWSEAMV 148
Query: 134 ---RKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNI 190
R+ G TI A + A G A+N+ GG HH AD+GGGFC + D ++ +
Sbjct: 149 ERSRRSAGATIEACRTALREGIAVNLAGGTHHAYADKGGGFCVFNDAAIAARVLQRDGAV 208
Query: 191 SRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTN 250
RV ++DLD HQGNG D V+ L + YP EA D V + G +
Sbjct: 209 RRVAVVDLDVHQGNGTASILQGDPSVFTLSLHGEKNYPFRKEAS---DLDVGLPDGCDDD 265
Query: 251 EYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
Y + L AL+ FDPEL+IY AG D EGD LG L++
Sbjct: 266 TYAQALQAALDTLFSRFDPELIIYLAGADPHEGDRLGRLRL 306
>gi|118357387|ref|XP_001011943.1| Histone deacetylase family protein [Tetrahymena thermophila]
gi|89293710|gb|EAR91698.1| Histone deacetylase family protein [Tetrahymena thermophila SB210]
Length = 458
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/125 (47%), Positives = 73/125 (58%), Gaps = 1/125 (0%)
Query: 168 GGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSR-VYILDMFNPGI 226
GGGFC Y DI I Y I R MI+DLDAHQGNGHE+DF D +ILD +N I
Sbjct: 271 GGGFCIYPDICFAIEYLRKCFGIKRCMIVDLDAHQGNGHERDFIDDKENTFILDFYNHSI 330
Query: 227 YPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPL 286
YP D A + I V T+ +EY+ L + L+ F PE ++YNAGTD LEGD L
Sbjct: 331 YPADTFAAKGISLSKNVDFDTSDSEYISMLRKTLQKILDQFKPEFLLYNAGTDCLEGDRL 390
Query: 287 GMLKV 291
G + +
Sbjct: 391 GQMNL 395
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 79/139 (56%), Gaps = 4/139 (2%)
Query: 32 IFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLL 91
I LP++Y P Y+I+ GIEKLHPFDS K+GR+ L +GFL + +P E L+
Sbjct: 78 IENLPILYHPSYNITACGIEKLHPFDSVKYGRVFNILKEKGFLQEQGFYKPKEKVGRGLM 137
Query: 92 VVHSES--YLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
+ S YL L + VS IE+ P+ P ++ KVL P G+I AA L+ +
Sbjct: 138 LHLGMSPLYLLYLNYAAYVSKCIEI-PLFFLPASFLRWKVLDPMMFSTQGSIDAAVLSLK 196
Query: 150 RGWAINVGGGFHH-CSADE 167
RGW+IN+ GG+HH C E
Sbjct: 197 RGWSINLSGGYHHACRYSE 215
>gi|392310191|ref|ZP_10272725.1| histone deacetylase [Pseudoalteromonas citrea NCIMB 1889]
Length = 302
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 123/264 (46%), Gaps = 21/264 (7%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
LPL+Y P+Y SF + H F SK+ + ++ +G + N + +P + L +V
Sbjct: 6 NLPLVYHPNYSFSF---DPKHRFVMSKFANLYHYVQQQGLITNN-LYQPELGAPSHLELV 61
Query: 94 HSESYLKSL---QSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKER 150
H ESYL L Q S V I +P + L+ R P GT+ A+LA E
Sbjct: 62 HCESYLWDLWHNQLSDKVMRRIGLP----WSEALMARTFTAPL-----GTLKTAELALEH 112
Query: 151 GWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDF 210
G A ++ GG HH D G GFC D++ ++ V+I DLD HQG+G
Sbjct: 113 GIACHLAGGTHHAHYDFGSGFCMVNDLAFTATTLVKNKKVNNVLIFDLDVHQGDGTAAML 172
Query: 211 SSDSRVYILDMFNPGIYP-RDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDP 269
D V+ + +P R +++ D + + + + YL + LE +P
Sbjct: 173 KHDPYVFTCSVHCEKNFPFRKHDS----DLDIGLANNLSDTRYLDIVKNTLEGLISDLNP 228
Query: 270 ELVIYNAGTDILEGDPLGMLKVKW 293
+LV+Y+AG D+ E D LG L + W
Sbjct: 229 DLVLYDAGVDVWEHDGLGKLDITW 252
>gi|410941483|ref|ZP_11373280.1| histone deacetylase family protein [Leptospira noguchii str.
2006001870]
gi|410783432|gb|EKR72426.1| histone deacetylase family protein [Leptospira noguchii str.
2006001870]
Length = 271
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 110/215 (51%), Gaps = 11/215 (5%)
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVG 138
I +P A +DL +VH++ +L S +++ + + +++++ F VG
Sbjct: 17 IYKPDLAKTKDLSLVHTQEFLDDFFS-------LKITEKTQYSELPLTKQIVHSFVLAVG 69
Query: 139 GTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDL 198
GTIL+ +L ++ + ++GGGFHH D GFC D ++ + +++ IDL
Sbjct: 70 GTILSMELTQKYKFIYHIGGGFHHSMPDRAEGFCYLNDAAIASKLYQKEHPGKKILFIDL 129
Query: 199 DAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDE 258
D HQGNG+ F D V+ M +YP+ ++ D V + GT EYL+ L++
Sbjct: 130 DLHQGNGNSFVFQDDPDVFTFSMHQEDLYPKKEKS----DLDVPLKEGTEDKEYLELLEK 185
Query: 259 ALEVAGHTFDPELVIYNAGTDILEGDPLGMLKVKW 293
+L F P+L+ Y AG D EGD LG LK+ +
Sbjct: 186 SLRKIESDFKPDLIFYIAGADPFEGDSLGDLKLTF 220
>gi|197337404|ref|YP_002157959.1| deacetylase [Vibrio fischeri MJ11]
gi|197314656|gb|ACH64105.1| deacetylase [Vibrio fischeri MJ11]
Length = 298
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 128/264 (48%), Gaps = 25/264 (9%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
L LIY P Y S L + H + K+ R+ Q + S + C EP+ S E + VH
Sbjct: 2 LALIYHPIY--SQLALPDGHRYPIQKYQRLYQAIQSHYSDELYCCFEPIPLSIEAIKQVH 59
Query: 95 SESYLKSLQSSPNVSIIIEVPPVAL----FP--NCLVQRKVLYPFRKQVGGTILAAKLAK 148
E+Y+ +L + +P + FP L++R +L GT L A
Sbjct: 60 EENYVNALVTG-------TLPAAKMRRIGFPWSESLIERTLL-----SASGTCLTVDKAL 107
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEK 208
E G AI++ GG+HH D G GFC D+++ H+ + +I +V+IID D H G+G
Sbjct: 108 ENGSAIHLSGGYHHAHYDFGSGFCLVNDLAIAAHHGLSKDSIDKVLIIDSDVHHGDGTAT 167
Query: 209 DFSSDSRVYILDMFNPGIYPRDYEARRFI-DQKVEVVSGTTTNEYLKKLDEALEVAGHTF 267
+ + L +P AR+ I D V + GT NE+L+ ++ +E+A +
Sbjct: 168 LCADRGDIITLSFHCDKNFP----ARKPISDYDVPLSVGTQDNEFLEAFEQIVEMAINHH 223
Query: 268 DPELVIYNAGTDILEGDPLGMLKV 291
P+L+IY+AG DI D LG L V
Sbjct: 224 QPDLIIYDAGVDIHIDDELGYLSV 247
>gi|384440597|ref|YP_005655321.1| histone deacetylase [Thermus sp. CCB_US3_UF1]
gi|359291730|gb|AEV17247.1| Histone deacetylase [Thermus sp. CCB_US3_UF1]
Length = 294
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/242 (33%), Positives = 119/242 (49%), Gaps = 22/242 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQS---SPNVSI 110
HPF K+ + + L G L I+ E +E L + H +YL+ L + + S+
Sbjct: 17 HPFPLYKYRGVAEAL--RGLL---PILPAPEVPREALYLAHQGAYLERLFTQGLTREESL 71
Query: 111 IIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGG 170
+ +P F L++R + GGT+ AA+ A + G +N+ GG HH D G
Sbjct: 72 RLGLP----FHPALLRRAL-----HAAGGTLAAAEDALDTGLGLNLSGGTHHAFPDRAEG 122
Query: 171 FCAYADISLCIHYAFVQLNI-SRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPR 229
+ + D+++ + + + R +++DLDAHQGNG F D V+ L + YP
Sbjct: 123 YSLFNDVAVALAWLRAKRGFGGRALVLDLDAHQGNGTAVFFGEDPTVFTLSLHGERNYPL 182
Query: 230 DYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGML 289
E D V + GT YL+ L+EALEVA F PELV YNAG D+L GD G L
Sbjct: 183 KKERS---DLDVGLPDGTEDGAYLRALEEALEVA-QAFRPELVFYNAGVDVLRGDRFGRL 238
Query: 290 KV 291
+
Sbjct: 239 AL 240
>gi|119584567|gb|EAW64163.1| histone deacetylase 11, isoform CRA_g [Homo sapiens]
Length = 213
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 56/102 (54%), Positives = 74/102 (72%)
Query: 190 ISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTT 249
ISR IIDLDAHQGNGHE+DF D RVYI+D++N IYP D A++ I +KVE+ GT
Sbjct: 93 ISRATIIDLDAHQGNGHERDFMDDKRVYIMDVYNRHIYPGDRFAKQAIRRKVELEWGTED 152
Query: 250 NEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+EYL K++ ++ + P++V+YNAGTDILEGD LG L +
Sbjct: 153 DEYLDKVERNIKKSLQEHLPDVVVYNAGTDILEGDRLGGLSI 194
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 59/81 (72%)
Query: 23 SSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEP 82
+++LY +P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L + +VE
Sbjct: 4 TTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEA 63
Query: 83 LEASKEDLLVVHSESYLKSLQ 103
EAS+EDLLVVH+ YL L+
Sbjct: 64 REASEEDLLVVHTRRYLNELK 84
>gi|418702252|ref|ZP_13263163.1| histone deacetylase family protein [Leptospira interrogans serovar
Bataviae str. L1111]
gi|410758771|gb|EKR24997.1| histone deacetylase family protein [Leptospira interrogans serovar
Bataviae str. L1111]
Length = 271
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 109/215 (50%), Gaps = 11/215 (5%)
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVG 138
I +P A +DL +VH++ +L S + + + + +++++ F VG
Sbjct: 17 IYKPDLAKTKDLSLVHTQEFLDDFFS-------LNITERTQYSELPLTKQIVHSFVLAVG 69
Query: 139 GTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDL 198
GTIL+ +L ++ + ++GGGFHH D GFC D ++ + +++ IDL
Sbjct: 70 GTILSMELTQKYKFVYHIGGGFHHSMPDRAEGFCYLNDAAIASKLYQKEYPDKKILFIDL 129
Query: 199 DAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDE 258
D HQGNG+ F +D V+ M +YP+ ++ D + + G EYL+ L++
Sbjct: 130 DLHQGNGNSFIFQNDPNVFTFSMHQENLYPKKEKS----DLDISLEEGIGDKEYLELLEK 185
Query: 259 ALEVAGHTFDPELVIYNAGTDILEGDPLGMLKVKW 293
+L F P+L+ Y AG D EGD LG LK+ +
Sbjct: 186 SLREIESDFKPDLIFYIAGADPFEGDSLGDLKLTF 220
>gi|59713550|ref|YP_206325.1| deacetylase [Vibrio fischeri ES114]
gi|59481798|gb|AAW87437.1| deacetylase [Vibrio fischeri ES114]
Length = 298
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 128/264 (48%), Gaps = 25/264 (9%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
L LIY P Y S L + H + K+ R+ Q + S + C EP+ S E + VH
Sbjct: 2 LALIYHPIY--SQLALPDGHRYPIQKYQRLYQAIQSHYSDELYCCFEPIPLSIEAIKQVH 59
Query: 95 SESYLKSLQSSPNVSIIIEVPPVAL----FP--NCLVQRKVLYPFRKQVGGTILAAKLAK 148
E+Y+ +L + +P + FP L++R +L GT L A
Sbjct: 60 EENYVNALVTG-------TLPAAKMRRIGFPWSESLIERTLL-----SASGTCLTVDKAL 107
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEK 208
E G AI++ GG+HH D G GFC D+++ H+ + +I +V+IID D H G+G
Sbjct: 108 ENGSAIHLSGGYHHAHYDFGSGFCLVNDLAIAAHHGLSKDSIDKVLIIDSDVHHGDGTAT 167
Query: 209 DFSSDSRVYILDMFNPGIYPRDYEARRFI-DQKVEVVSGTTTNEYLKKLDEALEVAGHTF 267
+ + L +P AR+ I D V + GT NE+L+ ++ +E+A +
Sbjct: 168 LCADRGDIITLSFHCDKNFP----ARKPISDYDVPLAIGTQDNEFLEAFEQIVEMAINHH 223
Query: 268 DPELVIYNAGTDILEGDPLGMLKV 291
P+L+IY+AG DI D LG L +
Sbjct: 224 QPDLIIYDAGVDIHIDDELGYLNI 247
>gi|428781211|ref|YP_007172997.1| deacetylase [Dactylococcopsis salina PCC 8305]
gi|428695490|gb|AFZ51640.1| deacetylase, histone deacetylase/acetoin utilization protein
[Dactylococcopsis salina PCC 8305]
Length = 307
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 125/265 (47%), Gaps = 28/265 (10%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LP+IY PDY + H F +K+G + + L ++G ++ + +P A +E L +VH
Sbjct: 3 LPIIYHPDY---VTPLPPGHRFPMAKFGLLYEILLADGIIEPQQVHQPEIAPREWLELVH 59
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQ--------VGGTILAAKL 146
+ Y++ + S QR++ P+ +Q VGGTIL AKL
Sbjct: 60 TSEYVEDYCNGTLDSK--------------AQRRIGLPWSEQLAHRTCLAVGGTILTAKL 105
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
A E+G A N GG HH D G GFC + D+++ + +++I+DLD HQG+G
Sbjct: 106 ALEQGLACNTAGGTHHAFPDYGAGFCIFNDLAIAPSVMLNLGLVEKILIVDLDVHQGDGT 165
Query: 207 EKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHT 266
F D RV+ M +P ++ D + + G + YL+ L + L
Sbjct: 166 AFIFQDDPRVFTFSMHCGDNFP---GRKQKSDLDIPLPQGLDDDGYLQILAKQLPQVLDA 222
Query: 267 FDPELVIYNAGTDILEGDPLGMLKV 291
P+LV Y+AG D D LG L +
Sbjct: 223 VKPDLVFYDAGVDPHVDDRLGKLAL 247
>gi|313674860|ref|YP_004052856.1| histone deacetylase [Marivirga tractuosa DSM 4126]
gi|312941558|gb|ADR20748.1| Histone deacetylase [Marivirga tractuosa DSM 4126]
Length = 300
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 113/238 (47%), Gaps = 13/238 (5%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ + + L EG + ++ P S+ED+L VH+ Y + L+ N+++ +
Sbjct: 18 HRFPMIKYELLPEQLIYEGTVTESSFFSPNLLSEEDILAVHTNEYWQKLK---NLTLSRK 74
Query: 114 VPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGF 171
FP L++R+ R GTI AA A E G A+N+ GG HH D G GF
Sbjct: 75 EERRTGFPLSAALIERE-----RIINQGTIDAANFALEYGVAMNIAGGTHHAFTDRGEGF 129
Query: 172 CAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDY 231
C DI++ Y +S+++++DLD HQGNG + F + V+ M G YP
Sbjct: 130 CLLNDIAIAAQYLLKNAKVSKILVVDLDVHQGNGTAEIFRDNPDVFTFSMHGKGNYPMHK 189
Query: 232 EARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGML 289
E D +E+ T YL L E L P+ + + +G D+L D LG L
Sbjct: 190 ERS---DLDIEMEDKTDDKTYLTVLRENLPKLIDDEQPDFIFFQSGVDVLATDKLGRL 244
>gi|417760258|ref|ZP_12408284.1| histone deacetylase family protein [Leptospira interrogans str.
2002000624]
gi|417766916|ref|ZP_12414865.1| histone deacetylase family protein [Leptospira interrogans serovar
Bulgarica str. Mallika]
gi|417768599|ref|ZP_12416526.1| histone deacetylase family protein [Leptospira interrogans serovar
Pomona str. Pomona]
gi|417774430|ref|ZP_12422295.1| histone deacetylase family protein [Leptospira interrogans str.
2002000621]
gi|417785462|ref|ZP_12433166.1| histone deacetylase family protein [Leptospira interrogans str.
C10069]
gi|418675465|ref|ZP_13236756.1| histone deacetylase family protein [Leptospira interrogans str.
2002000623]
gi|418679801|ref|ZP_13241058.1| histone deacetylase family protein [Leptospira interrogans serovar
Pomona str. Kennewicki LC82-25]
gi|418693218|ref|ZP_13254281.1| histone deacetylase family protein [Leptospira interrogans str.
FPW2026]
gi|418706491|ref|ZP_13267339.1| histone deacetylase family protein [Leptospira interrogans serovar
Hebdomadis str. R499]
gi|418709210|ref|ZP_13270004.1| histone deacetylase family protein [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
gi|418717391|ref|ZP_13277053.1| histone deacetylase family protein [Leptospira interrogans str. UI
08452]
gi|418723865|ref|ZP_13282699.1| histone deacetylase family protein [Leptospira interrogans str. UI
12621]
gi|418729853|ref|ZP_13288395.1| histone deacetylase family protein [Leptospira interrogans str. UI
12758]
gi|421087108|ref|ZP_15547949.1| histone deacetylase family protein [Leptospira santarosai str.
HAI1594]
gi|421104756|ref|ZP_15565349.1| histone deacetylase family protein [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|421120054|ref|ZP_15580368.1| histone deacetylase family protein [Leptospira interrogans str.
Brem 329]
gi|421126066|ref|ZP_15586310.1| histone deacetylase family protein [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
gi|421136771|ref|ZP_15596868.1| histone deacetylase family protein [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|45600255|gb|AAS69741.1| histone deacetylase [Leptospira interrogans serovar Copenhageni
str. Fiocruz L1-130]
gi|400328402|gb|EJO80634.1| histone deacetylase family protein [Leptospira interrogans serovar
Pomona str. Kennewicki LC82-25]
gi|400350722|gb|EJP02980.1| histone deacetylase family protein [Leptospira interrogans serovar
Bulgarica str. Mallika]
gi|400356876|gb|EJP13034.1| histone deacetylase family protein [Leptospira interrogans str.
FPW2026]
gi|409943825|gb|EKN89416.1| histone deacetylase family protein [Leptospira interrogans str.
2002000624]
gi|409949245|gb|EKN99222.1| histone deacetylase family protein [Leptospira interrogans serovar
Pomona str. Pomona]
gi|409951327|gb|EKO05842.1| histone deacetylase family protein [Leptospira interrogans str.
C10069]
gi|409962663|gb|EKO26397.1| histone deacetylase family protein [Leptospira interrogans str. UI
12621]
gi|410018953|gb|EKO85781.1| histone deacetylase family protein [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|410347140|gb|EKO98059.1| histone deacetylase family protein [Leptospira interrogans str.
Brem 329]
gi|410365066|gb|EKP20461.1| histone deacetylase family protein [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410430217|gb|EKP74587.1| histone deacetylase family protein [Leptospira santarosai str.
HAI1594]
gi|410436718|gb|EKP85830.1| histone deacetylase family protein [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
gi|410575763|gb|EKQ38780.1| histone deacetylase family protein [Leptospira interrogans str.
2002000621]
gi|410577627|gb|EKQ45497.1| histone deacetylase family protein [Leptospira interrogans str.
2002000623]
gi|410764116|gb|EKR34835.1| histone deacetylase family protein [Leptospira interrogans serovar
Hebdomadis str. R499]
gi|410770546|gb|EKR45765.1| histone deacetylase family protein [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
gi|410775466|gb|EKR55458.1| histone deacetylase family protein [Leptospira interrogans str. UI
12758]
gi|410786988|gb|EKR80723.1| histone deacetylase family protein [Leptospira interrogans str. UI
08452]
gi|455666672|gb|EMF32079.1| histone deacetylase family protein [Leptospira interrogans serovar
Pomona str. Fox 32256]
gi|455790835|gb|EMF42682.1| histone deacetylase family protein [Leptospira interrogans serovar
Lora str. TE 1992]
gi|456825484|gb|EMF73880.1| histone deacetylase family protein [Leptospira interrogans serovar
Canicola str. LT1962]
gi|456969210|gb|EMG10271.1| histone deacetylase family protein [Leptospira interrogans serovar
Grippotyphosa str. LT2186]
gi|456988116|gb|EMG23271.1| histone deacetylase family protein [Leptospira interrogans serovar
Copenhageni str. LT2050]
Length = 271
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 109/215 (50%), Gaps = 11/215 (5%)
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVG 138
I +P A +DL +VH++ +L S + + + + +++++ F VG
Sbjct: 17 IYKPDLAKTKDLSLVHTQEFLDDFFS-------LNITERTQYSELPLTKQIVHSFVLAVG 69
Query: 139 GTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDL 198
GTIL+ +L ++ + ++GGGFHH D GFC D ++ + +++ IDL
Sbjct: 70 GTILSMELTQKYKFVYHIGGGFHHSMPDRAEGFCYLNDAAIASKLYQKEYPDKKILFIDL 129
Query: 199 DAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDE 258
D HQGNG+ F +D V+ M +YP+ ++ D + + G EYL+ L++
Sbjct: 130 DLHQGNGNSFIFQNDPDVFTFSMHQENLYPKKEKS----DLDISLEEGIGDKEYLELLEK 185
Query: 259 ALEVAGHTFDPELVIYNAGTDILEGDPLGMLKVKW 293
+L F P+L+ Y AG D EGD LG LK+ +
Sbjct: 186 SLRKIESDFKPDLIFYIAGADPFEGDSLGDLKLTF 220
>gi|328949949|ref|YP_004367284.1| histone deacetylase [Marinithermus hydrothermalis DSM 14884]
gi|328450273|gb|AEB11174.1| Histone deacetylase [Marinithermus hydrothermalis DSM 14884]
Length = 294
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 112/243 (46%), Gaps = 25/243 (10%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYL-----KSLQSSPNV 108
HPF K+ + +E D+ I P L + H +YL + LQ +
Sbjct: 18 HPFPLYKYPGV-----AEALRDRLAIRTPPAVDWGTLALAHRPAYLMRLRQEGLQRQEEL 72
Query: 109 SIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEG 168
+ + P L++R R+ VGGT+ A + A G +N+ GG HH D
Sbjct: 73 RLGLRYTP------ALLERA-----RRSVGGTLAATQDALIHGLGLNLAGGTHHAYPDRA 121
Query: 169 GGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
G+ + D+++ + + Q RV+++DLDAHQGNG F D V+ L + YP
Sbjct: 122 EGYSLFNDVAVAVRWLRAQGFRGRVLVVDLDAHQGNGTAVFFQDDPTVFTLSVHAANNYP 181
Query: 229 RDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGM 288
R E D V + T YL+ L+ ALE A F PELV YNAG D+L GD G
Sbjct: 182 RHKEQS---DLDVPLPDRTPDAAYLEALEPALEEA-FAFRPELVFYNAGVDVLAGDRFGR 237
Query: 289 LKV 291
L +
Sbjct: 238 LAL 240
>gi|224825370|ref|ZP_03698475.1| histone deacetylase superfamily [Pseudogulbenkiania ferrooxidans
2002]
gi|224602291|gb|EEG08469.1| histone deacetylase superfamily [Pseudogulbenkiania ferrooxidans
2002]
Length = 312
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 119/247 (48%), Gaps = 30/247 (12%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASK-EDLLVVHSESYLKSLQSSPNVSIII 112
H F + K+ + + S GF ++EP A+ +L VH +Y+ +L
Sbjct: 17 HRFPAEKYRLLAE--SVAGFAPH--LLEPASAATPAELCRVHDAAYVHALLEG------- 65
Query: 113 EVPPVALFPNCLVQRKVLYPFRKQ--------VGGTILAAKLAKERGWAINVGGGFHHCS 164
+P A QR++ P+ Q VG TI AA++A +G +N+ GG HH
Sbjct: 66 SLPERA-------QREIGLPWSPQLVARACHSVGATIAAARVALLQGCGVNLAGGTHHAQ 118
Query: 165 ADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNP 224
AD+G GFC + D+++ + +I R ++IDLD HQGNG F ++RV+ M
Sbjct: 119 ADKGSGFCVFNDVAVAARLLLDEGHIRRALVIDLDVHQGNGTAALFRDEARVFTFSMHGQ 178
Query: 225 GIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGD 284
+P A D+ VE+ GT+ YL L LE P+LV Y AG D EGD
Sbjct: 179 NNFPFRKVAG---DRDVELPDGTSDETYLALLSANLEELFRLARPDLVFYLAGADPYEGD 235
Query: 285 PLGMLKV 291
LG LK+
Sbjct: 236 RLGKLKL 242
>gi|94501715|ref|ZP_01308229.1| putative histone deacetylase family protein [Oceanobacter sp.
RED65]
gi|94426115|gb|EAT11109.1| putative histone deacetylase family protein [Oceanobacter sp.
RED65]
Length = 305
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 127/265 (47%), Gaps = 22/265 (8%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFL--DKNCIVEPLEASKEDLLV 92
L LIY P+Y F + H F SK+ R+ + + EG++ D + +++P AS EDL +
Sbjct: 2 LKLIYHPNYSCDF---PENHRFVMSKFVRLYEVATREGWVLADGSNVLQPQAASLEDLSI 58
Query: 93 VHSESYLKSLQSS---PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
VH +YL L + P I +P + LV R + P GT+LAA+ A +
Sbjct: 59 VHDATYLNGLVGNDIDPKAWRRIGLP----WSQGLVDRTLTAP-----NGTLLAARTALQ 109
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKD 209
G A ++ GG HH D G GFC D++ + R++I D D HQG+G
Sbjct: 110 EGLACHLAGGTHHAHRDFGSGFCMINDLAYAAKTLVANNEVQRILIFDCDVHQGDGTAAI 169
Query: 210 FSSDSRVYILDMFNPGIYP-RDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFD 268
+D+ ++ + +P R ++ D V + EY+ + L+ T
Sbjct: 170 LENDADIFTCSIHCEKNFPFRKSQS----DLDVGLDLYLQDKEYIDVVMSTLQDLLETVK 225
Query: 269 PELVIYNAGTDILEGDPLGMLKVKW 293
P+LV+Y+AG D+ + D LG L + W
Sbjct: 226 PDLVLYDAGVDVWQHDDLGKLDITW 250
>gi|295136397|ref|YP_003587073.1| histone deacetylase [Zunongwangia profunda SM-A87]
gi|294984412|gb|ADF54877.1| histone deacetylase family protein [Zunongwangia profunda SM-A87]
Length = 279
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 113/233 (48%), Gaps = 13/233 (5%)
Query: 59 SKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVA 118
K+ + + L EG ++ EP A ED+L VH++ Y+++L N+++
Sbjct: 2 EKYDLLPKQLLHEGTCEQQHFFEPKPADLEDILAVHTKEYVENL---TNLTLDRRAIRKT 58
Query: 119 LFP--NCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYAD 176
FP LV R+++ GGT+ + A E G ++N+ GG HH +D G FC D
Sbjct: 59 GFPLSQELVDREIII-----AGGTLEGCQYALENGISMNIAGGTHHAYSDHGEAFCLLHD 113
Query: 177 ISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRF 236
++ Y + +++IIDLD HQGNG + F +D+ V+ M G YP E
Sbjct: 114 QAIAARYLQKKKLAEKILIIDLDVHQGNGTAEIFQNDNSVFTFSMHGKGNYPFRKEIS-- 171
Query: 237 IDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGML 289
D +EV G+ YL+ L E L P+ + Y G DILE D LG L
Sbjct: 172 -DLDIEVPDGSKDEYYLETLKEILPDLIEKVQPDFIFYLCGVDILETDKLGRL 223
>gi|339325544|ref|YP_004685237.1| deacetylase [Cupriavidus necator N-1]
gi|338165701|gb|AEI76756.1| deacetylase histone deacetylase family [Cupriavidus necator N-1]
Length = 352
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 103/221 (46%), Gaps = 25/221 (11%)
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPF----- 133
+VE A + LL+ H+ Y+++ + + QR++ +P+
Sbjct: 86 LVEAPRAGDDALLLAHTPGYVQAASTGTL--------------DAARQREIGFPWSEAMV 131
Query: 134 ---RKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNI 190
R+ G TI A + A G A+N+ GG HH AD+GGGFC + D ++ +
Sbjct: 132 ERSRRSAGATIEACRTALREGVAVNLAGGTHHAYADKGGGFCVFNDAAIAARVLQRDGAV 191
Query: 191 SRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTN 250
RV ++DLD HQGNG D V+ L + YP EA V + G +
Sbjct: 192 RRVAVVDLDVHQGNGTASILQGDPSVFTLSLHGEKNYPFRKEASNL---DVGLPDGCDDD 248
Query: 251 EYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
Y + L AL+ FDPEL+IY AG D EGD LG L++
Sbjct: 249 TYAQALQAALDTLFSRFDPELLIYLAGADPHEGDRLGRLRL 289
>gi|374364611|ref|ZP_09622713.1| histone deacetylase family deacetylase [Cupriavidus basilensis
OR16]
gi|373103908|gb|EHP44927.1| histone deacetylase family deacetylase [Cupriavidus basilensis
OR16]
Length = 322
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 106/216 (49%), Gaps = 15/216 (6%)
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQSS---PNVSIIIEVPPVALFPNCLVQRKVLYPFRK 135
+VE A + LL+ H+ Y+ S+ P+ I P + + +V+R R+
Sbjct: 40 LVEAPRAGDDALLLAHTPEYVASVSRGELDPSRQREIGFP----WSDAMVERS-----RR 90
Query: 136 QVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMI 195
G TI A ++A G ++N+ GG HH AD+GGGFC + D ++ + RV +
Sbjct: 91 SAGATIEACRIALREGISVNLAGGTHHAYADKGGGFCVFNDAAVAARQLRRDGRVERVAV 150
Query: 196 IDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKK 255
+DLD HQGNG D V+ L + YP EA D V + G + Y +
Sbjct: 151 VDLDVHQGNGTASILRDDPFVFTLSLHGEKNYPFRKEAS---DLDVGLPDGCDDDAYAQA 207
Query: 256 LDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
L AL++ F P+L+IY AG D EGD LG LK+
Sbjct: 208 LQGALDMLFARFSPDLIIYLAGADPHEGDRLGRLKL 243
>gi|410450935|ref|ZP_11304962.1| histone deacetylase family protein [Leptospira sp. Fiocruz LV3954]
gi|418746281|ref|ZP_13302611.1| histone deacetylase family protein [Leptospira santarosai str.
CBC379]
gi|418753911|ref|ZP_13310147.1| histone deacetylase family protein [Leptospira santarosai str.
MOR084]
gi|421110535|ref|ZP_15571030.1| histone deacetylase family protein [Leptospira santarosai str. JET]
gi|409965752|gb|EKO33613.1| histone deacetylase family protein [Leptospira santarosai str.
MOR084]
gi|410015247|gb|EKO77352.1| histone deacetylase family protein [Leptospira sp. Fiocruz LV3954]
gi|410792828|gb|EKR90753.1| histone deacetylase family protein [Leptospira santarosai str.
CBC379]
gi|410804131|gb|EKS10254.1| histone deacetylase family protein [Leptospira santarosai str. JET]
gi|456876398|gb|EMF91500.1| histone deacetylase family protein [Leptospira santarosai str.
ST188]
Length = 270
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 108/215 (50%), Gaps = 11/215 (5%)
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVG 138
+ P A +DL +VH+E +L S I E + P + ++++ F VG
Sbjct: 17 VYRPEPAKDKDLALVHTEEFLNDFFSLK----ITERTQSSELP---LTKQIVQSFVLAVG 69
Query: 139 GTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDL 198
GTILA +L ++ + ++GGGFHH D GFC D ++ + +++ IDL
Sbjct: 70 GTILATELTEKYKFVYHIGGGFHHSMPDRAEGFCYLNDAAIAVKLYQRAYPGRKILFIDL 129
Query: 199 DAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDE 258
D HQGNG+ F D V+ M +YP+ + + +D +E GT +YL+ L E
Sbjct: 130 DLHQGNGNSVVFQEDPDVFTFSMHQENLYPK--KEKSGLDIPLE--EGTNDGKYLELLVE 185
Query: 259 ALEVAGHTFDPELVIYNAGTDILEGDPLGMLKVKW 293
+L F P+L+ Y AG D EGD LG LK+ +
Sbjct: 186 SLRKIESDFKPDLIFYIAGADPFEGDSLGDLKLTF 220
>gi|71280821|ref|YP_270049.1| histone deacetylase [Colwellia psychrerythraea 34H]
gi|71146561|gb|AAZ27034.1| histone deacetylase family protein [Colwellia psychrerythraea 34H]
Length = 300
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 130/264 (49%), Gaps = 28/264 (10%)
Query: 36 PLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHS 95
PL++ P Y S L + H F K+ I L + G + N +P + +++ V+
Sbjct: 4 PLVFHPIY--SQLELPIRHRFPIEKYVGIRNALVANG-VPNNWFKKPTPVNPDNVKTVYD 60
Query: 96 ESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQ--------VGGTILAAKLA 147
+Y+ L ++ ++ A+ R++ +P+ +Q VGGTI+ A+LA
Sbjct: 61 PTYIHQLINN-------QLDSKAM-------RRIGFPWSQQLIERTLTAVGGTIMTAQLA 106
Query: 148 KERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHE 207
E G ++N+ GG+HH A+ G GFC D+ L NIS+V+I D D HQG+G
Sbjct: 107 LEYGKSLNLTGGYHHAFANFGSGFCMINDLYLAALTMLQNDNISKVLIFDADVHQGDGTA 166
Query: 208 KDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTF 267
K S++ V+ + + +P + + GTT + YL+ +D AL A +F
Sbjct: 167 KLASNNQNVFTVSIHGEKNFPHRKQVSNL---DFALPKGTTDSLYLETVDNALNKAFSSF 223
Query: 268 DPELVIYNAGTDILEGDPLGMLKV 291
P+ VIY+AG DI D LG L +
Sbjct: 224 KPDAVIYDAGVDIHCNDDLGHLDI 247
>gi|386288827|ref|ZP_10065967.1| deacetylase [gamma proteobacterium BDW918]
gi|385278382|gb|EIF42354.1| deacetylase [gamma proteobacterium BDW918]
Length = 320
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 122/261 (46%), Gaps = 18/261 (6%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
+LPL+ +P Y F H F K+ + L G + P E L +
Sbjct: 17 QLPLVSNPLYSYPF---ASGHRFPMQKFSLLFNHLREIGIATQANTYRPGRVRGEVLALA 73
Query: 94 HSESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKER 150
H Y+ + + SP+ + + +P + L QR ++ P GT L A+LA +
Sbjct: 74 HCPQYIHAFCNNTLSPSANRRMGLP----WSESLRQRSLISP-----NGTFLTAQLALKY 124
Query: 151 GWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDF 210
G A ++ GG HH D GFC + D+++ Q + R++I D D HQG+G +
Sbjct: 125 GMACHLAGGTHHAHYDFASGFCIFNDLAVTARTLLAQKKVQRILIFDCDVHQGDGTARIL 184
Query: 211 SSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPE 270
SD+ V+ + +P +AR +D + V +G EYL ++ L A P+
Sbjct: 185 QSDTAVFTCSVHCEKNFPVR-KARSDLD--INVAAGCGDQEYLDIVNAGLSQALRLARPD 241
Query: 271 LVIYNAGTDILEGDPLGMLKV 291
+V+Y+AG DI E DPLG+L +
Sbjct: 242 IVLYDAGVDIYEHDPLGLLNI 262
>gi|318042114|ref|ZP_07974070.1| histone deacetylase family protein [Synechococcus sp. CB0101]
Length = 304
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 118/264 (44%), Gaps = 26/264 (9%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
+ P +Y P Y + H F +K+ + Q L +G + + VEPL A + L +
Sbjct: 1 MRPPFVYHPAYSAP---LPSSHRFPMAKFRLLHQLLQDQGLANVDQFVEPLPAPRRWLEL 57
Query: 93 VHSESYLKSL-------QSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK 145
VH Y ++ Q + + P LVQR L VGGT+L A+
Sbjct: 58 VHEPRYHRAFARGELSHQEQRRIGLPATTP--------LVQRTWL-----AVGGTVLTAR 104
Query: 146 LAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
LA E G A ++ GG HH D G GFC + D ++ + + ++M+IDLD HQG+
Sbjct: 105 LALEHGLACHLAGGTHHAYPDHGSGFCIFNDCAVAARVLLAESRVQQLMVIDLDVHQGDA 164
Query: 206 HEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGH 265
F+ + RV+ + + +P + D + + G + YL + + +
Sbjct: 165 TAAIFADEPRVFTVSVHCQSNFPLRKQCS---DVDLPLDDGLEDDAYLSAIGDLIPNLLD 221
Query: 266 TFDPELVIYNAGTDILEGDPLGML 289
P+LV+YNAG D D LG L
Sbjct: 222 QVRPDLVLYNAGVDPHRDDRLGKL 245
>gi|392549858|ref|ZP_10296995.1| histone deacetylase [Pseudoalteromonas spongiae UST010723-006]
Length = 302
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 123/263 (46%), Gaps = 18/263 (6%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
LPL+Y P+Y SF ++ H F SK+ R+ Q+L S+G++++ + +P + + +V
Sbjct: 5 NLPLVYHPNYSFSF---DEKHRFVMSKFARLYQYLDSKGYINQRNLYQPPVGDFKPMELV 61
Query: 94 HSESYLKSL---QSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKER 150
H ESY+ L Q I +P + L+ R P GT LAA+LA E
Sbjct: 62 HCESYVHDLFHNQLDSKAMRRIGLP----WSEQLMARTFTAPL-----GTHLAAELALEH 112
Query: 151 GWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDF 210
G A ++ GG HH D G G+C D++ + V+I D D HQG+G
Sbjct: 113 GIACHLAGGTHHAHYDFGSGYCMVNDLAYTATRLINEGKARNVLIFDCDVHQGDGTAAML 172
Query: 211 SSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPE 270
+ + V+ + +P ++ D + + G T +YL + +P
Sbjct: 173 AHNPYVFTCSIHCEKNFPF---RKQHSDLDIGLEIGLTDPDYLNIVSTTFNDLIEQLNPS 229
Query: 271 LVIYNAGTDILEGDPLGMLKVKW 293
LV+Y+AG DI + D LG L + W
Sbjct: 230 LVLYDAGVDIWQQDTLGKLDISW 252
>gi|410644684|ref|ZP_11355159.1| histone deacetylase family protein [Glaciecola agarilytica NO2]
gi|410135692|dbj|GAC03558.1| histone deacetylase family protein [Glaciecola agarilytica NO2]
Length = 300
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 126/264 (47%), Gaps = 28/264 (10%)
Query: 36 PLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHS 95
PL++ P Y S L + H F K+ I L S G + K +P + L V+S
Sbjct: 4 PLVFHPIY--SQLDLPFKHRFPIEKYQAIYDRLISLG-VPKAQFYQPDALTPSQLKRVYS 60
Query: 96 ESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQ--------VGGTILAAKLA 147
Y+ L L P + R++ +P+ +Q V GT++ + LA
Sbjct: 61 PDYVNGLTQG------------VLDPKAM--RRIGFPWSEQLIQRSLTAVAGTVMTSNLA 106
Query: 148 KERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHE 207
E+G A+N+ GG+HH A+ G GFC + D+ L I++V+I D D HQG+G
Sbjct: 107 LEQGKALNLTGGYHHAFANFGAGFCLFNDLYLAALNMLQASAINKVLIFDCDVHQGDGTA 166
Query: 208 KDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTF 267
K S++ +V+ + + +P ++ D + G T +EYL ++ AL A TF
Sbjct: 167 KLASNNPKVFTVSLHGEKNFP---HRKQVSDLDFPLAKGATDDEYLTVVERALHQAFSTF 223
Query: 268 DPELVIYNAGTDILEGDPLGMLKV 291
P+ VIY+AG DI D LG L +
Sbjct: 224 QPDAVIYDAGVDIHVNDDLGHLHI 247
>gi|332307586|ref|YP_004435437.1| histone deacetylase [Glaciecola sp. 4H-3-7+YE-5]
gi|332174915|gb|AEE24169.1| Histone deacetylase [Glaciecola sp. 4H-3-7+YE-5]
Length = 318
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 130/268 (48%), Gaps = 28/268 (10%)
Query: 32 IFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLL 91
+ PL++ P Y S L + H F K+ I L S G + K +P + L
Sbjct: 18 LLSTPLVFHPIY--SQLDLPFKHRFPIEKYQAIYDRLISLG-VPKAQFYQPDALTPSQLK 74
Query: 92 VVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQ--------VGGTILA 143
V+S Y+ L ++E P A+ R++ +P+ +Q V GT++
Sbjct: 75 RVYSPDYVNGLTQG-----VLE--PKAM-------RRIGFPWSEQLIQRSLTAVAGTVMT 120
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQG 203
+ LA E+G A+N+ GG+HH A+ G GFC + D+ L I++V+I D D HQG
Sbjct: 121 STLALEQGKALNLTGGYHHAFANFGAGFCLFNDLYLAALNMLQASAINKVLIFDCDVHQG 180
Query: 204 NGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVA 263
+G K S++ +V+ + + +P ++ D + G T +EYL ++ AL A
Sbjct: 181 DGTAKLASNNPKVFTVSLHGEKNFP---HRKQVSDLDFPLAKGATDDEYLTVVERALHQA 237
Query: 264 GHTFDPELVIYNAGTDILEGDPLGMLKV 291
TF P+ VIY+AG DI D LG L +
Sbjct: 238 FSTFQPDAVIYDAGVDIHVNDDLGHLHI 265
>gi|434393911|ref|YP_007128858.1| Histone deacetylase [Gloeocapsa sp. PCC 7428]
gi|428265752|gb|AFZ31698.1| Histone deacetylase [Gloeocapsa sp. PCC 7428]
Length = 304
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 123/261 (47%), Gaps = 20/261 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LP+IY PDY + + H F K+ R+ + L ++G P++ E + +VH
Sbjct: 3 LPIIYHPDY---VAPLPEGHRFPMPKFSRLYELLIADGVAHPAQFHTPVQPPSEWITLVH 59
Query: 95 SESYLKSLQSS---PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
+ Y ++ + P I +P + + LV+R + VGGTIL AKLA G
Sbjct: 60 TPDYFQAYCTGTLDPKAQRRIGLP----WSSALVKRTCI-----AVGGTILTAKLALSHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLN-ISRVMIIDLDAHQGNGHEKDF 210
A N GG HH G GFC + D+++ QL + +V+I+DLD HQG+G F
Sbjct: 111 LACNTAGGTHHAFPSYGSGFCIFNDLAIAAR-VLQQLQLVKKVLIVDLDVHQGDGTAYIF 169
Query: 211 SSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPE 270
D+ V+ M +P ++ D V + G + YL+ L L P+
Sbjct: 170 QEDASVFTFSMHCEVNFP---GTKQKSDLDVPLPVGMEDDAYLQTLANYLPDLLSHVKPD 226
Query: 271 LVIYNAGTDILEGDPLGMLKV 291
LV+Y+AG D GD LG L +
Sbjct: 227 LVLYDAGVDPHAGDRLGKLAL 247
>gi|332141953|ref|YP_004427691.1| histone deacetylase family protein [Alteromonas macleodii str.
'Deep ecotype']
gi|410862358|ref|YP_006977592.1| histone deacetylase family protein [Alteromonas macleodii AltDE1]
gi|327551975|gb|AEA98693.1| histone deacetylase family protein [Alteromonas macleodii str.
'Deep ecotype']
gi|410819620|gb|AFV86237.1| histone deacetylase family protein [Alteromonas macleodii AltDE1]
Length = 324
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 129/268 (48%), Gaps = 28/268 (10%)
Query: 32 IFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLL 91
+ PL++ P Y S L + + H F K+ I L G +DK + P L
Sbjct: 24 LMTTPLVFHPIY--SQLDLPERHRFPIEKYVGIRDELIRRG-IDKARFITPSPLDFSVLT 80
Query: 92 VVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQ--------VGGTILA 143
+ Y+++L +S N+ + R++ +P+ +Q V GT L
Sbjct: 81 DNYDRQYVEAL-TSGNL-------------DKKAMRRIGFPWSQQLIERTRTAVAGTCLT 126
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQG 203
A LA + G A+N+ GG+HH AD G GFC + D+ L I V+I+DLD HQG
Sbjct: 127 ASLALQHGKALNLTGGYHHAFADFGSGFCLFNDLYLAAKTMQKSSAIDNVLIVDLDVHQG 186
Query: 204 NGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVA 263
+G K +D ++ L + +P Y ++ D + + GT +EYL+ L++AL +A
Sbjct: 187 DGTAKLAENDRDIFTLSIHGEKNFP--YRKQQS-DIDIGLAKGTEDDEYLQTLEQALALA 243
Query: 264 GHTFDPELVIYNAGTDILEGDPLGMLKV 291
F P+ +IY+AG D+ D LG L +
Sbjct: 244 KRQFQPDAIIYDAGVDVHVNDDLGHLHI 271
>gi|297567404|ref|YP_003686376.1| histone deacetylase [Meiothermus silvanus DSM 9946]
gi|296851853|gb|ADH64868.1| Histone deacetylase [Meiothermus silvanus DSM 9946]
Length = 299
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 117/242 (48%), Gaps = 23/242 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASK-EDLLVVHSESYLKSLQS---SPNVS 109
HPF K+G + + L E V P A E L + H +YL L+S S S
Sbjct: 19 HPFPRYKYGGVAEVLRGE------VQVRPAPALPWEALALAHEPNYLARLRSQGLSRQES 72
Query: 110 IIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGG 169
+ + +P + L+ R + GGT++A++ A ERG +N+ GG HH D
Sbjct: 73 LRVGLP----WSESLLTRAL-----HAAGGTLMASRDALERGLGMNLAGGTHHAYPDRAE 123
Query: 170 GFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPR 229
G+ + D+++ + + + +++DLDAHQGNG F +DS V+ L + YP
Sbjct: 124 GYSLFNDVAVALANLRAEGFGGKALVVDLDAHQGNGTAVFFQNDSYVFTLSLHGERNYPL 183
Query: 230 DYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGML 289
E D V + GT YL+ L++AL G P+LV +NAG D+L GD G L
Sbjct: 184 RKEKS---DLDVGLPDGTADQAYLEALEQALST-GFACKPDLVFFNAGVDVLAGDRFGRL 239
Query: 290 KV 291
+
Sbjct: 240 SL 241
>gi|400288975|ref|ZP_10791007.1| histone deacetylase superfamily protein [Psychrobacter sp. PAMC
21119]
Length = 305
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 119/258 (46%), Gaps = 18/258 (6%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
L + YS DI + + H F K+ I + L +EG + P S+E++L H
Sbjct: 2 LKIAYS---DIFRYAVPEKHRFPMQKYTMIPERLLAEGTISMVNFFAPARLSEEEILTTH 58
Query: 95 SESYLKSL--QSSPNVSIIIEVPPVAL-FPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
+ Y L Q+ P E P+ LV R R T A A++ G
Sbjct: 59 TMDYWYKLKTQTLPRK----EARPIGFEMTEALVDRG-----RHIAHATYECALYAQQYG 109
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A+NV GG HH AD G GFC + D+ + + + +++++DLD HQGNG+ +
Sbjct: 110 VAMNVAGGTHHAFADHGEGFCVFNDVCIASNLLLNRGQAQKILVVDLDVHQGNGNASIMA 169
Query: 212 SDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPEL 271
++ RV++ M YP E D +E+ + T EYL+ L+E L F P++
Sbjct: 170 NEPRVFVFSMHGAKNYPFRKEIS---DLDIELANNTGDAEYLQILEETLPRLITEFAPDM 226
Query: 272 VIYNAGTDILEGDPLGML 289
+ Y + D+L D LG L
Sbjct: 227 IFYQSAVDVLATDKLGKL 244
>gi|148242804|ref|YP_001227961.1| histone deacetylase family protein [Synechococcus sp. RCC307]
gi|147851114|emb|CAK28608.1| Histone deacetylase family protein [Synechococcus sp. RCC307]
Length = 306
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 122/266 (45%), Gaps = 26/266 (9%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
++PL+Y P Y + H F +K+ ++ Q L+ +G + + +PL + L +
Sbjct: 3 IRVPLVYHPLYSAP---LPSSHRFPMAKFRQLRQCLADKGLAQEQQVHQPLPCPRRWLEL 59
Query: 93 VHSESYLKSL-------QSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK 145
VH Y ++ Q+ + + P LVQR L VGGT+ A+
Sbjct: 60 VHPRRYHQAFARGELDRQAQRRIGLPATQP--------LVQRTWL-----SVGGTLRTAQ 106
Query: 146 LAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
LA E G A ++ GG HH D G GFC + DI++ Q ++++M++DLD HQG+
Sbjct: 107 LALEHGMACHLAGGTHHAFPDYGSGFCIFNDIAVTASVLLQQGLVNKLMVVDLDVHQGDA 166
Query: 206 HEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGH 265
F+ + RV+ +P ++ D + + G YL+ + + L
Sbjct: 167 TAAIFTGEPRVFTFSAHAASNFPSRKQSS---DLDLPLADGLEDQAYLQSVGDVLPALLD 223
Query: 266 TFDPELVIYNAGTDILEGDPLGMLKV 291
P+LV+YNAG D D LG L +
Sbjct: 224 QQQPDLVLYNAGVDPHRADRLGKLAL 249
>gi|298207409|ref|YP_003715588.1| Histone deacetylase superfamily protein [Croceibacter atlanticus
HTCC2559]
gi|83850045|gb|EAP87913.1| Histone deacetylase superfamily protein [Croceibacter atlanticus
HTCC2559]
Length = 299
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 124/257 (48%), Gaps = 17/257 (6%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
L + Y P Y + + + H F K+ + + L EG D + EP+ S+ + +VH
Sbjct: 2 LKIAYHPIYKVP---LPEGHRFPMEKYELLPKQLIYEGTCDPDNFFEPV-YSETFVDLVH 57
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
+ +Y+ L+ N+++ FP + LV+R+ + GTI A A E G
Sbjct: 58 TTNYISDLK---NLTLDARAARKIGFPLNSALVEREFII-----ADGTIKACDFALEYGI 109
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
A+N+ GG HH + G GFC + D ++ Y +V+IIDLD HQGNG + F
Sbjct: 110 AMNIAGGTHHAYTNRGEGFCMFNDQAIGARYLQHTNKAKQVLIIDLDVHQGNGTAEIFKD 169
Query: 213 DSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELV 272
D+ V+ M YP E+ D + + S TT + YLK L E L +P+ +
Sbjct: 170 DTSVFTFSMHGEKNYPFKKESS---DLDIALPSHTTDDNYLKLLKETLPKLISDVNPDFI 226
Query: 273 IYNAGTDILEGDPLGML 289
Y +G DILE D LG L
Sbjct: 227 FYLSGVDILETDKLGKL 243
>gi|209523626|ref|ZP_03272180.1| histone deacetylase superfamily [Arthrospira maxima CS-328]
gi|423065918|ref|ZP_17054708.1| histone deacetylase superfamily [Arthrospira platensis C1]
gi|209496031|gb|EDZ96332.1| histone deacetylase superfamily [Arthrospira maxima CS-328]
gi|406712676|gb|EKD07860.1| histone deacetylase superfamily [Arthrospira platensis C1]
Length = 305
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 124/265 (46%), Gaps = 24/265 (9%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LP+++ PDY + H F K+G +C L EG + ++ + P E + +
Sbjct: 1 MNLPIVFHPDY---VAPLPPGHRFPMPKFGLLCDMLLQEGVIRRSQLHLPKLPPTEWIEL 57
Query: 93 VHSESYLKSL---QSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
VH Y+++ + P I +P + L QR + VGG IL AKLA
Sbjct: 58 VHHRDYVEAYCQGKLDPKAQRRIGLP----WSQALAQRTCI-----AVGGAILTAKLALS 108
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISL--CIHYAFVQLNIS-RVMIIDLDAHQGNGH 206
G A N GG HH + G GFC + DI++ C+ +L ++ +++I+DLD HQG+
Sbjct: 109 HGLACNTAGGTHHAFPNYGSGFCIFNDIAIAACV---MQKLGLAKKILIVDLDVHQGDAT 165
Query: 207 EKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHT 266
F + V+ M +P ++ D+ + + G EYL+ L L
Sbjct: 166 AVIFQDNPHVFTFSMHCQANFP---AKKQTSDRDIPLAVGMEDEEYLQILASHLPDLLTE 222
Query: 267 FDPELVIYNAGTDILEGDPLGMLKV 291
F P+LVIY+AG D GD LG L +
Sbjct: 223 FRPDLVIYDAGVDTHIGDRLGKLAL 247
>gi|410642129|ref|ZP_11352647.1| histone deacetylase 11 [Glaciecola chathamensis S18K6]
gi|410138446|dbj|GAC10834.1| histone deacetylase 11 [Glaciecola chathamensis S18K6]
Length = 318
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 125/263 (47%), Gaps = 18/263 (6%)
Query: 32 IFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLL 91
+ PL++ P Y S L + H F K+ I L S G + K +P + L
Sbjct: 18 LLSTPLVFHPIY--SQLDLPFKHRFPIEKYQAIYDRLISLG-VPKAQFYQPDALTPSQLK 74
Query: 92 VVHSESYLKSLQSS---PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAK 148
V+S Y+ L P I P + L+QR + V GT++ + LA
Sbjct: 75 RVYSPDYVNGLTQGVLDPKAMRRIGFP----WSEQLIQRSL-----TAVAGTVMTSTLAL 125
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEK 208
E+G A+N+ GG+HH A+ G GFC + D+ L I++V+I D D HQG+G K
Sbjct: 126 EQGKALNLTGGYHHAFANFGAGFCLFNDLYLAALNMLQASAINKVLIFDCDVHQGDGTAK 185
Query: 209 DFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFD 268
S++ +V+ + + +P ++ D + GTT +EYL ++ AL A T
Sbjct: 186 LASNNPKVFTVSLHGEKNFP---HRKQVSDLDFPLAKGTTDDEYLTVVERALHQAFSTVQ 242
Query: 269 PELVIYNAGTDILEGDPLGMLKV 291
P+ VIY+AG DI D LG L +
Sbjct: 243 PDAVIYDAGVDIHVNDDLGHLHI 265
>gi|81300202|ref|YP_400410.1| histone deacetylase/AcuC/AphA family protein-like protein
[Synechococcus elongatus PCC 7942]
gi|81169083|gb|ABB57423.1| histone deacetylase/AcuC/AphA family protein-like [Synechococcus
elongatus PCC 7942]
Length = 304
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/257 (31%), Positives = 117/257 (45%), Gaps = 12/257 (4%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPL+Y P Y + H F +K+ + L E + +P E L VH
Sbjct: 3 LPLVYHPGYSAP---LPSTHRFPMAKFRLLHDRLLRERVVYPQQFHQPDRPPLEWLTSVH 59
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAI 154
S Y+++ + + P LV+R + VGGTIL A+LA ++G A
Sbjct: 60 SLDYIQAYSQGTLDERSLRRIGLPWSP-ALVERTWI-----AVGGTILTARLALQQGLAC 113
Query: 155 NVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDS 214
N+ GG HH D G GFC + D ++ + + R++I+DLD HQG+G F D
Sbjct: 114 NLAGGTHHAFPDYGSGFCIFNDCAIAARLLLQERLVERILIVDLDVHQGDGTAWIFQDDP 173
Query: 215 RVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIY 274
RV+ M +P ++ D V + G + YL++L + L P LVIY
Sbjct: 174 RVFTFSMHCEANFP---ARKQHSDCDVPLPEGMEDDAYLQQLAQYLPDLLSQVRPNLVIY 230
Query: 275 NAGTDILEGDPLGMLKV 291
NAG D GD LG L +
Sbjct: 231 NAGVDPHGGDRLGKLAL 247
>gi|317969127|ref|ZP_07970517.1| histone deacetylase family protein [Synechococcus sp. CB0205]
Length = 304
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 118/262 (45%), Gaps = 18/262 (6%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
+LPL+Y P Y + H F +K+ + L +G + I PL + L +
Sbjct: 1 MRLPLVYHPAYSAP---LPSSHRFPMAKFKLLRALLEEQGLAREEQIHTPLPVPRRSLEL 57
Query: 93 VHSESYLKSLQSS---PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
+HS Y ++ P I +P LVQR L VGG++L A+LA +
Sbjct: 58 IHSRRYHQAFARGELLPAEQRRIGLPAT----TPLVQRTWL-----AVGGSLLTARLALQ 108
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKD 209
G + ++ GG HH D G GFC + D ++ + + R+MIIDLD HQG+
Sbjct: 109 HGVSCHLAGGTHHAYPDHGSGFCIFNDFAVAAQVLLAEGQVQRLMIIDLDVHQGDATASI 168
Query: 210 FSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDP 269
F + RV+ L + +P + D + + G + YL+ + + + P
Sbjct: 169 FRDEPRVFTLSVHCGSNFPLRKQQS---DVDLALDDGLGDDAYLESIGDLIPTLLDQEQP 225
Query: 270 ELVIYNAGTDILEGDPLGMLKV 291
+LV+YNAG D D LG L +
Sbjct: 226 DLVLYNAGVDPHREDRLGRLNL 247
>gi|149199017|ref|ZP_01876057.1| histone deacetylase superfamily protein [Lentisphaera araneosa
HTCC2155]
gi|149137806|gb|EDM26219.1| histone deacetylase superfamily protein [Lentisphaera araneosa
HTCC2155]
Length = 300
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 115/241 (47%), Gaps = 15/241 (6%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESY---LKSLQSSPNVSI 110
HPF K+ + + + +G ++K+ EP S+ED+L+ HS Y L LQ S
Sbjct: 18 HPFPMEKYELLWRQILYQGIIEKDQYFEPKAISEEDILLCHSSEYWNKLNQLQLSDK--- 74
Query: 111 IIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGG 170
EV + FP + R ++ GGT+ + A E +N+ GG HH +D G G
Sbjct: 75 --EVKKIG-FP---LSRDLVNRELDITGGTLELSLWALENACGLNIAGGTHHAFSDHGEG 128
Query: 171 FCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRD 230
+C D ++ I + I R +I+DLD HQGNG + F++D+ V+ L + YP
Sbjct: 129 YCLLNDHAIAIRALQNRRLIKRALIVDLDVHQGNGSAEIFANDASVFTLSIHGERNYPTK 188
Query: 231 YEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLK 290
E D + + G EY+ L L T P+++ Y AG D+L GD G L
Sbjct: 189 KEKS---DLDIALADGIEDAEYMDVLHNTLPKLIETEKPDIIFYLAGADVLAGDRFGRLA 245
Query: 291 V 291
+
Sbjct: 246 L 246
>gi|77361149|ref|YP_340724.1| histone deacetylase [Pseudoalteromonas haloplanktis TAC125]
gi|76876060|emb|CAI87282.1| putative histone deacetylase family protein [Pseudoalteromonas
haloplanktis TAC125]
Length = 302
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 121/266 (45%), Gaps = 27/266 (10%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPL+Y P+Y SF + H F SK+ + Q + G + N +V+PL + E L +VH
Sbjct: 7 LPLVYHPNYSFSF---DPKHRFVMSKFAHLYQHVKQLGLVGDN-LVQPLLGTPEALELVH 62
Query: 95 SESYLKSL---QSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
E+Y+ L Q I +P + L+ R P GT+ A+LA + G
Sbjct: 63 CENYIHDLYHNQLDEKAMRRIGLP----WSKELMARTFTAP-----QGTLQTARLALKHG 113
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A ++ GG HH D G G+C D++ ++ V+I DLD HQG+G
Sbjct: 114 MACHLAGGTHHAHTDFGSGYCMVNDLAFTTQTLIESGEVTNVLIFDLDVHQGDGTAAMLQ 173
Query: 212 SDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTN----EYLKKLDEALEVAGHTF 267
Y + +P F ++ G T N EYL +D+ L+
Sbjct: 174 HQPYAYTCSIHCEKNFP-------FRKSPSDLDIGLTNNMQDAEYLGIVDDTLQFLLKEL 226
Query: 268 DPELVIYNAGTDILEGDPLGMLKVKW 293
+P+LV+Y+AG D+ + D LG L + W
Sbjct: 227 NPDLVLYDAGVDVWQQDGLGKLDISW 252
>gi|343494601|ref|ZP_08732851.1| histone deacetylase superfamily protein [Vibrio nigripulchritudo
ATCC 27043]
gi|342825014|gb|EGU59525.1| histone deacetylase superfamily protein [Vibrio nigripulchritudo
ATCC 27043]
Length = 308
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 127/271 (46%), Gaps = 34/271 (12%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGR----ICQFLSSEG-FLDKNCIVEPLEASKED 89
+P+IY P Y S L + H + +K+ R + Q L + + + VEP S E
Sbjct: 2 IPVIYHPIY--SELSLPPKHRYPITKYRRLYENVVQTLEHDAQWREGLSFVEPTALSTEQ 59
Query: 90 LLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTI 141
+L VH E Y++ L S E+P + R++ +P+ +Q+ GGT+
Sbjct: 60 VLEVHDEEYIQLLFSG-------EMPAAKM-------RRIGFPWSEQLITRTLTSAGGTV 105
Query: 142 LAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAH 201
AK A E G A+++ GG+HH D G GFC D+ L H A NI +V+I+D D H
Sbjct: 106 ETAKQAIEHGIALHLSGGYHHAHKDFGSGFCLINDLVLAAHEALKNENIDKVLIVDADVH 165
Query: 202 QGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFI-DQKVEVVSGTTTNEYLKKLDEAL 260
G+G + L +P AR+ D V + E+L + +
Sbjct: 166 HGDGTATLCEGREDIITLSFHCDKNFP----ARKPTSDMDVPLAREIGDEEFLSSFKQVV 221
Query: 261 EVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
E+A + P+L+IY+AG DI D LG L+V
Sbjct: 222 EMAINIHQPDLIIYDAGVDIHTDDELGYLQV 252
>gi|347539598|ref|YP_004847023.1| histone deacetylase superfamily protein [Pseudogulbenkiania sp.
NH8B]
gi|345642776|dbj|BAK76609.1| histone deacetylase superfamily protein [Pseudogulbenkiania sp.
NH8B]
Length = 312
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/245 (33%), Positives = 118/245 (48%), Gaps = 30/245 (12%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPL-EASKEDLLVVHSESYLKSLQSSPNVSIII 112
H F + K+ + + + EGF ++EP A+ +L VH +Y+ +L
Sbjct: 17 HRFPAEKYRLLAE--AVEGFALH--LLEPAPAATPAELCRVHDAAYVHALLEG------- 65
Query: 113 EVPPVALFPNCLVQRKVLYPFRKQ--------VGGTILAAKLAKERGWAINVGGGFHHCS 164
+P A QR++ P+ Q VG TI AA++A +G +N+ GG HH
Sbjct: 66 SLPERA-------QREIGLPWSPQLVARACHSVGATIAAARVALLQGCGVNLAGGTHHAQ 118
Query: 165 ADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNP 224
AD+G GFC + D+++ + +I R ++IDLD HQGNG F D+RV+ M
Sbjct: 119 ADKGSGFCVFNDVAVAARLLLDEGHIRRALVIDLDVHQGNGTAALFRDDARVFTFSMHGQ 178
Query: 225 GIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGD 284
+P A D+ VE+ GT+ YL L LE P+LV Y AG D EGD
Sbjct: 179 NNFPFRKVAG---DRDVELPDGTSDEGYLALLSANLEELFWLARPDLVFYLAGADPYEGD 235
Query: 285 PLGML 289
LG L
Sbjct: 236 RLGKL 240
>gi|428776510|ref|YP_007168297.1| histone deacetylase [Halothece sp. PCC 7418]
gi|428690789|gb|AFZ44083.1| Histone deacetylase [Halothece sp. PCC 7418]
Length = 300
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 122/260 (46%), Gaps = 18/260 (6%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LP+IY PDY + K H F +K+ + + L ++G + + +P +E L ++H
Sbjct: 3 LPIIYHPDY---VTPLPKGHRFPMAKFSLLQEILIADGVIQPQQVHQPELPPREWLELIH 59
Query: 95 SESYLKSLQSS---PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
+ Y+ + P I +P + LV+R L VGGTIL AKLA E+G
Sbjct: 60 TPDYVDAYCDGTLDPKAQRRIGLP----WSPELVRRTCL-----AVGGTILTAKLALEQG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A N GG HH D G GFC + D+++ + +V+I+DLD HQG+G F
Sbjct: 111 IACNTAGGTHHAFPDYGAGFCIFNDLAVAPAVMLALGLVKKVLIVDLDVHQGDGTAFVFQ 170
Query: 212 SDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPEL 271
D RV+ M +P ++ D + + G YL+ L + L P+L
Sbjct: 171 DDPRVFTFSMHCGDNFP---GRKQQSDLDLPLPKGLDDEGYLQILAKHLPEVLAAVQPDL 227
Query: 272 VIYNAGTDILEGDPLGMLKV 291
V Y+AG D D LG L +
Sbjct: 228 VFYDAGVDPHVDDRLGKLAL 247
>gi|308812538|ref|XP_003083576.1| Histone deacetylase superfamily (ISS) [Ostreococcus tauri]
gi|116055457|emb|CAL58125.1| Histone deacetylase superfamily (ISS), partial [Ostreococcus tauri]
Length = 351
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 126/268 (47%), Gaps = 20/268 (7%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFL-----DKNCIVEPLEASKE 88
++P+++ Y L + H F + R+ L+ EG + N + E
Sbjct: 40 RVPVVHHDSYSAPTL--PRGHRFPMGVFQRVRDALAREGIVRVGDSSSNAFSPSRRPTFE 97
Query: 89 DLLVVHSESYLKSLQSS--PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKL 146
+L HSE + ++ SS P+ + E+ + + LV+R ++ +V GT+L ++
Sbjct: 98 ELAAAHSEEWTRTATSSEGPDAKRLREIG--LPWSDVLVERTLM-----EVSGTMLTVEM 150
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
A E G A+N GG HH GGGFC D++ +SRVMI+DLD HQG+G
Sbjct: 151 ALECGLAVNTAGGTHHAKGTRGGGFCILNDLATASLAVLNSGRLSRVMIVDLDVHQGDGT 210
Query: 207 EKDFSSD-SRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGH 265
+ ++ R Y +P +AR D VE+ +EY+ + AL +
Sbjct: 211 AEILENEWHRCYTFSAHAASNFP-ARKARSTRD--VELPRSMNDDEYMSVVSSALRESLE 267
Query: 266 TFDPELVIYNAGTDILEGDPLGMLKVKW 293
F PELVIY+AG D+ D LG L + +
Sbjct: 268 DFRPELVIYDAGVDVTANDALGHLDLTF 295
>gi|430808555|ref|ZP_19435670.1| histone deacetylase superfamily protein [Cupriavidus sp. HMR-1]
gi|429499064|gb|EKZ97519.1| histone deacetylase superfamily protein [Cupriavidus sp. HMR-1]
Length = 307
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 107/214 (50%), Gaps = 15/214 (7%)
Query: 81 EPLEASKEDLLVVHSESYLKSLQSSP-NVSIIIEVPPVALFP--NCLVQRKVLYPFRKQV 137
E A E L +VH+ +Y++ + + +V+ E+ FP + +V+R R+
Sbjct: 42 EAPRADDETLALVHTAAYIEEVSTGQLDVARQREIG----FPWSHEMVERS-----RRSA 92
Query: 138 GGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIID 197
G TI A ++A E+G A N+ GG HH AD+G GFC + D ++ ++ RV +ID
Sbjct: 93 GATIAACRVALEQGIAANLAGGTHHAYADKGAGFCVFNDAAIAARRLQRDGSVRRVAVID 152
Query: 198 LDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLD 257
LD HQGNG D ++ L + YP EA D V + G Y L
Sbjct: 153 LDVHQGNGTASILRDDPTIFTLSLHGEKNYPFRKEAS---DLDVGLPDGCDDGAYAVALA 209
Query: 258 EALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
AL+ FDP+L+IY AG D EGD LG LK+
Sbjct: 210 SALDTLFARFDPDLLIYLAGADPHEGDRLGRLKL 243
>gi|351732315|ref|ZP_08950006.1| histone deacetylase [Acidovorax radicis N35]
Length = 314
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 111/229 (48%), Gaps = 39/229 (17%)
Query: 83 LEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPF--------R 134
L AS +L + H+ Y+ ++ +PP+A QR++ +P+ R
Sbjct: 44 LPASDRELALAHAPDYIDAIADG-------TLPPLA-------QREIGFPWSEAMAERAR 89
Query: 135 KQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISR-- 192
+ VG T+ A+++A G A N+ GG HH AD+G GFC + D+++ +Q+ +R
Sbjct: 90 RSVGATVAASRVALREGVAGNLAGGTHHAYADKGSGFCVFNDVAVAAR--LMQVEWARGG 147
Query: 193 ----------VMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVE 242
V +IDLD HQGNG F D V+ L + +P E D VE
Sbjct: 148 GDGRAARPLQVAVIDLDVHQGNGTAHIFRGDHSVFTLSLHGARNFPFRKEPS---DLDVE 204
Query: 243 VVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ G + +YL+ L+ AL+ F P+LV Y AG D EGD LG L V
Sbjct: 205 LPDGCSDPDYLQALEHALDALEQRFAPQLVFYLAGADPHEGDRLGRLAV 253
>gi|307105160|gb|EFN53410.1| hypothetical protein CHLNCDRAFT_25722 [Chlorella variabilis]
Length = 330
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 121/265 (45%), Gaps = 11/265 (4%)
Query: 30 IPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKED 89
+ I P++Y P Y L H F + + I + L ++G +D + +P D
Sbjct: 18 LSIAAPPVVYHPLYSAPQLA--PGHRFPMAVFSTIHRLLLADGVVDPRQVHQPSALPGRD 75
Query: 90 LL-VVHSESYLKSL-QSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLA 147
LL + H+ Y+ + S + + + F R ++ +V GTIL A+LA
Sbjct: 76 LLHLAHAAEYVDAFCGGSLDEQRVRRIG----FGEATRTRLLVDRTLAEVAGTILTAELA 131
Query: 148 KERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHE 207
G A N GG HH +D G GFC D+++ Q R++I+DLD HQG+G
Sbjct: 132 LGHGLACNTAGGTHHAFSDYGSGFCILNDLAITAQLLLHQRRCQRILILDLDVHQGDGTA 191
Query: 208 KDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTF 267
FS V+ L + +P +A + + GT NEYL+ + E+L F
Sbjct: 192 AIFSGRQDVFTLSVHAASNFPARKQASHL---DIALPDGTADNEYLRVVAESLSGVLQAF 248
Query: 268 DPELVIYNAGTDILEGDPLGMLKVK 292
P+LV+Y+AG D D LG L +
Sbjct: 249 RPDLVLYDAGVDPHADDALGRLALS 273
>gi|428304940|ref|YP_007141765.1| histone deacetylase [Crinalium epipsammum PCC 9333]
gi|428246475|gb|AFZ12255.1| Histone deacetylase [Crinalium epipsammum PCC 9333]
Length = 305
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 124/263 (47%), Gaps = 24/263 (9%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LP++Y P+Y + + + H F K+ ++ + L +G +K P+ ++ + +VH
Sbjct: 3 LPIVYHPNYVVP---LPEGHRFPMPKFKKLYELLIKDGVAEKTQFYSPVRPPEDWIELVH 59
Query: 95 SESYLK-----SLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
+ Y++ +L + I + P C+ VGGTIL A+LA
Sbjct: 60 TPEYVQAYCQGTLDAKAQRRIGLPWSPALANRTCVA-----------VGGTILTARLALT 108
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLN-ISRVMIIDLDAHQGNGHEK 208
G A N GG HH + G GFC + D+++ QL + +++I+DLD HQG+G
Sbjct: 109 YGLACNTAGGTHHAFPNYGSGFCIFNDLAVTAR-VLQQLGLVKKILIVDLDVHQGDGTAF 167
Query: 209 DFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFD 268
F D V+ M +P ++ D V + G +EYL+ LD+ L
Sbjct: 168 IFQDDKSVFTFSMHCEVNFP---GTKQTSDLDVPLAQGMEDDEYLQTLDKYLPDLLTEVK 224
Query: 269 PELVIYNAGTDILEGDPLGMLKV 291
P+LV+Y+AG D GD LG L +
Sbjct: 225 PDLVLYDAGVDPHLGDRLGKLSL 247
>gi|83649181|ref|YP_437616.1| deacetylase [Hahella chejuensis KCTC 2396]
gi|83637224|gb|ABC33191.1| Deacetylases, including yeast histone deacetylase and acetoin
utilization protein [Hahella chejuensis KCTC 2396]
Length = 306
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 122/262 (46%), Gaps = 18/262 (6%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
K+PL+Y P+Y I H F K+ + +FL +EG L + P A++ED+ +
Sbjct: 3 KVPLVYHPEYSPE---IPAGHRFPMEKFRLLAEFLRAEGVLTDANLFTPEAATQEDIALA 59
Query: 94 HSESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKER 150
H Y++ + S I +P + + R + VGGT+L A+LA +
Sbjct: 60 HCADYVRDFRHGELSAKHMRQIGLP----WSEGVCTRTF-----RAVGGTLLTARLALKY 110
Query: 151 GWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDF 210
G ++ GG HH D G GFC + D+++ SRV+IID D HQG+G +
Sbjct: 111 GLVAHLAGGTHHAHYDHGSGFCVFNDLAVAARVLVRGGEASRVLIIDCDVHQGDGTARIL 170
Query: 211 SSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPE 270
+ D ++ +P + D +E+ G+ Y++ ++ L P+
Sbjct: 171 TDDPDIFTCSFHCRQNFP---YRKAHSDFDIELDRGSDGRAYMQTMEHWLPYIFDLTQPD 227
Query: 271 LVIYNAGTDILEGDPLGMLKVK 292
V+Y+AG D+ + D LG L +K
Sbjct: 228 FVLYDAGVDVHDDDVLGHLHLK 249
>gi|56750171|ref|YP_170872.1| histone deacetylase/AcuC/AphA family protein [Synechococcus
elongatus PCC 6301]
gi|56685130|dbj|BAD78352.1| similar to histone deacetylase/AcuC/AphA family protein
[Synechococcus elongatus PCC 6301]
Length = 304
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/257 (31%), Positives = 116/257 (45%), Gaps = 12/257 (4%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPL+Y P Y + H F +K+ + L E + +P E L VH
Sbjct: 3 LPLVYHPGYSAP---LPSTHRFPMAKFRLLHDRLLRERVVYPQQFHQPDRPPLEWLTSVH 59
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAI 154
S Y+++ + + P LV+R + VGGTIL A+LA ++G A
Sbjct: 60 SLDYIQAYSQGTLDERSLRRIGLPWSP-ALVERTWI-----AVGGTILTARLALQQGLAC 113
Query: 155 NVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDS 214
N+ GG HH D G GFC + D ++ + + R++I+DLD HQG+G F D
Sbjct: 114 NLAGGTHHAFPDYGSGFCIFNDCAIAARLLLQERLVERILIVDLDVHQGDGTAWIFQDDP 173
Query: 215 RVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIY 274
RV+ M +P + D V + G + YL++L + L P LVIY
Sbjct: 174 RVFTFSMHCEANFP---ARNQHSDCDVPLPEGMEDDAYLQQLAQYLPDLLSQVRPNLVIY 230
Query: 275 NAGTDILEGDPLGMLKV 291
NAG D GD LG L +
Sbjct: 231 NAGVDPHGGDRLGKLAL 247
>gi|421116476|ref|ZP_15576861.1| histone deacetylase family protein [Leptospira interrogans serovar
Canicola str. Fiocruz LV133]
gi|410011936|gb|EKO70042.1| histone deacetylase family protein [Leptospira interrogans serovar
Canicola str. Fiocruz LV133]
Length = 271
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 108/215 (50%), Gaps = 11/215 (5%)
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVG 138
I +P A +DL +VH++ +L S + + + + +++++ F VG
Sbjct: 17 IYKPDLAKTKDLSLVHTQEFLDDFFS-------LNITERTQYSELPLTKQIVHSFVLAVG 69
Query: 139 GTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDL 198
GTIL+ +L ++ + ++GGGFHH D GFC D ++ + +++ IDL
Sbjct: 70 GTILSMELTQKYKFVYHIGGGFHHSMPDRAEGFCYLNDAAIASKLYQKEYPDKKILFIDL 129
Query: 199 DAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDE 258
D HQGNG+ F +D V+ M +YP+ ++ D + + G EYL+ L++
Sbjct: 130 DLHQGNGNSFIFQNDPDVFTFSMHQENLYPKKEKS----DLDISLEEGIGDKEYLELLEK 185
Query: 259 ALEVAGHTFDPELVIYNAGTDILEGDPLGMLKVKW 293
+L F +L+ Y AG D EGD LG LK+ +
Sbjct: 186 SLRKIESDFKSDLIFYIAGADPFEGDSLGDLKLTF 220
>gi|156404296|ref|XP_001640343.1| predicted protein [Nematostella vectensis]
gi|156227477|gb|EDO48280.1| predicted protein [Nematostella vectensis]
Length = 308
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 127/260 (48%), Gaps = 18/260 (6%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LP+I+ Y F H F +K+ ++ ++L + + N + P AS +DL+ VH
Sbjct: 1 LPVIHHDQYSCPF---PPQHRFKMAKFTKLMEWLLKDNVVIPNQVYRPFFASYDDLIKVH 57
Query: 95 SESYLKSLQSSPNVSIIIEVPPVAL-FP--NCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
+ Y+++ + I E + FP LV+R R +VGGTIL A++A E G
Sbjct: 58 TPDYVRNFL----LGTISERDMKQIGFPWSEGLVRRT-----RMEVGGTILTARIALECG 108
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A + GGG HH G GFC + D+++ Y ++RVMI+DLD HQG+G F
Sbjct: 109 LACSTGGGTHHAFPSHGSGFCIFNDLAITASYLLDNNLVTRVMIVDLDVHQGDGTASIFQ 168
Query: 212 SDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPEL 271
++ V+ + +P + +D +E G EYL + L + P++
Sbjct: 169 NEPNVFTFSAHSEKNFPLRKQTSN-LDLSLE--CGMDDLEYLTTVCAHLTWLLDMWRPDI 225
Query: 272 VIYNAGTDILEGDPLGMLKV 291
V+Y+AG D D LG LK+
Sbjct: 226 VLYDAGVDPHVDDVLGRLKL 245
>gi|407688433|ref|YP_006803606.1| histone deacetylase family protein [Alteromonas macleodii str.
'Balearic Sea AD45']
gi|407291813|gb|AFT96125.1| histone deacetylase family protein [Alteromonas macleodii str.
'Balearic Sea AD45']
Length = 300
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 126/264 (47%), Gaps = 28/264 (10%)
Query: 36 PLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHS 95
PL++ P Y S L + + H F K+ I L + G ++ + V P L +
Sbjct: 4 PLVFHPIY--SQLDLPERHRFPIEKYVGIRDELLNRG-VEASRFVTPSPVDLSFLTAYYD 60
Query: 96 ESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQ--------VGGTILAAKLA 147
Y+ +L + AL + R++ +P+ +Q V GT L AKLA
Sbjct: 61 PDYVDALSTG------------ALDKKAM--RRIGFPWSQQLIERTRTAVAGTCLTAKLA 106
Query: 148 KERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHE 207
E G A+N+ GG+HH AD G GFC + D+ L ++ V+I+DLD HQG+G
Sbjct: 107 LEHGKALNLTGGYHHAFADFGSGFCLFNDLYLAAKTMQQTPSVENVLIVDLDVHQGDGTA 166
Query: 208 KDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTF 267
K +D ++ L + +P ++ D + + GT +EYL L++AL + F
Sbjct: 167 KLAENDRDIFTLSIHGEKNFP---HRKQRSDIDIGLDKGTADDEYLTTLEQALTMVMRQF 223
Query: 268 DPELVIYNAGTDILEGDPLGMLKV 291
P+ +IY+AG D+ D LG L +
Sbjct: 224 QPDAIIYDAGVDVHVNDDLGHLHI 247
>gi|375013620|ref|YP_004990608.1| deacetylase [Owenweeksia hongkongensis DSM 17368]
gi|359349544|gb|AEV33963.1| deacetylase, histone deacetylase/acetoin utilization protein
[Owenweeksia hongkongensis DSM 17368]
Length = 300
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 119/255 (46%), Gaps = 12/255 (4%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
L + YSP Y + H F K+ I + L EG ++ P + S++ +L H
Sbjct: 2 LKIAYSPIYHHP---LPPGHRFPMVKYSLIPEQLLYEGTCSEDNFFTPEKLSEKQILRTH 58
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAI 154
+ Y + L+++ L P LV+R++ GTI AK A E G ++
Sbjct: 59 TAEYWEKLKTNSLTRQEERKTGFPLTPK-LVEREITI-----CQGTIDNAKHALEHGISM 112
Query: 155 NVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDS 214
N+ GG HH A+ G GFC DI L H+ +++++DLD HQGNG K ++S
Sbjct: 113 NIAGGTHHAYANSGEGFCLLNDICLASHWLLDNNLAKQILVVDLDVHQGNGTAKIMENES 172
Query: 215 RVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIY 274
RV+ M YP E+ D +E+ GT + YL+ L+ L P+ + +
Sbjct: 173 RVFTFSMHGEKNYPMHKESS---DLDIELPDGTEDSLYLQTLENNLPRLIDEVQPDFIFF 229
Query: 275 NAGTDILEGDPLGML 289
+G DIL D LG L
Sbjct: 230 QSGVDILATDKLGRL 244
>gi|297623371|ref|YP_003704805.1| histone deacetylase [Truepera radiovictrix DSM 17093]
gi|297164551|gb|ADI14262.1| Histone deacetylase [Truepera radiovictrix DSM 17093]
Length = 309
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/235 (34%), Positives = 118/235 (50%), Gaps = 15/235 (6%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F + K+ ++ L G+ + E A +EDL VH+ +YL +L++
Sbjct: 27 HRFPAQKYAQLAARLRELGWQ----VDEAPAAPREDLARVHTAAYLAALEAL-------A 75
Query: 114 VPPVALFPNCLVQ-RKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFC 172
+PP A L Q R +L R VGGT+ A A+ RG+ +N+GGG HH AD G GFC
Sbjct: 76 LPPKAERRLGLPQSRALLTRERHTVGGTLAALYDARTRGYGVNLGGGTHHAFADRGEGFC 135
Query: 173 AYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYE 232
+ D+++ ++A + +RVMIIDLD HQG+ + D V+ + YP E
Sbjct: 136 VFNDLAVAAYHALERGLAARVMIIDLDVHQGDDTAHLCAFDPHVFTYSVHGAHNYPFHKE 195
Query: 233 ARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLG 287
R D +E G T YL +L+ L A F PEL +Y G D+L GD G
Sbjct: 196 -RSACDVPLE--DGVTDAAYLARLEATLPDAVARFRPELALYVGGADVLAGDRFG 247
>gi|296112749|ref|YP_003626687.1| histone deacetylase [Moraxella catarrhalis RH4]
gi|295920443|gb|ADG60794.1| histone deacetylase family protein [Moraxella catarrhalis BBH18]
Length = 301
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 118/243 (48%), Gaps = 19/243 (7%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F +K+ I + L ++G + ++ + P S++++L H+ Y L++ E
Sbjct: 18 HRFPMAKYDLIPKKLLTDGIITQDNLFHPELLSEQEILSTHTADYWHKLKTGTLTDK--E 75
Query: 114 VPPVAL-FPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFC 172
+ + L L++R+ R T A AKE G +++V GG HH AD G GFC
Sbjct: 76 IRKIGLPMSASLIKRE-----RYITHATYECALYAKEYGISLSVSGGTHHGFADHGEGFC 130
Query: 173 AYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYE 232
+ D+ + + + R++ +DLD HQGNG+ +++ V++ M YP
Sbjct: 131 VFNDVCVASNLLLARGQAKRILSVDLDVHQGNGNASIMANNPAVFVFSMHGKKNYP---- 186
Query: 233 ARRFI----DQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGM 288
FI D +E+ GT N YL L + L H FDP+++ Y AG D+L D LG
Sbjct: 187 ---FIKPPSDLDIELDDGTDDNAYLTILGKTLPKIIHNFDPDMLFYQAGVDVLATDKLGK 243
Query: 289 LKV 291
L +
Sbjct: 244 LSL 246
>gi|326334871|ref|ZP_08201072.1| histone deacetylase [Capnocytophaga sp. oral taxon 338 str. F0234]
gi|325692908|gb|EGD34846.1| histone deacetylase [Capnocytophaga sp. oral taxon 338 str. F0234]
Length = 299
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 106/243 (43%), Gaps = 19/243 (7%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLK-----SLQSSPNV 108
H F K+ + + L EG + K P + S +VHS Y+K +L +
Sbjct: 16 HRFPMEKYALLHEQLLWEGVVQKQDFFSPKKVSFASATLVHSPQYVKDFIGLTLDERTRI 75
Query: 109 SIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEG 168
I + LV R++ V GTI A A E G A N+ GG HH ++ G
Sbjct: 76 HIGF------IQSQQLVDRELTL-----VQGTIDGALYALEDGIAFNIAGGTHHAYSNRG 124
Query: 169 GGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
GFC D ++ Y R++IIDLD HQGNG + FS V+ M G YP
Sbjct: 125 EGFCMLNDQAIAAAYLLQYRKAKRILIIDLDVHQGNGTAEIFSHTPEVFTFSMHAKGNYP 184
Query: 229 RDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGM 288
E D +E+ TT YL L EAL P+ V Y +G D+LE D LG
Sbjct: 185 FVKEQS---DMDIELEDKTTDTVYLSLLKEALTKLFEKHQPDFVFYQSGVDVLESDKLGK 241
Query: 289 LKV 291
L +
Sbjct: 242 LNL 244
>gi|109897487|ref|YP_660742.1| histone deacetylase superfamily protein [Pseudoalteromonas
atlantica T6c]
gi|109699768|gb|ABG39688.1| histone deacetylase superfamily [Pseudoalteromonas atlantica T6c]
Length = 306
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 125/268 (46%), Gaps = 28/268 (10%)
Query: 32 IFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLL 91
+ PL++ P Y S L + H F K+ I L G + + +P + L
Sbjct: 6 LLSTPLVFHPIY--SQLDLPFKHRFPIEKYQAIYDKLIGLG-VPQGQFHQPHALTPSQLN 62
Query: 92 VVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQ--------VGGTILA 143
V+S Y+ L L P + R++ +P+ +Q VGGT+L
Sbjct: 63 RVYSPDYVNDLTRG------------MLDPKAM--RRIGFPWSEQLIARSLTAVGGTVLT 108
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQG 203
+ LA E G A+N+ GG+HH A+ G GFC + D+ L I +V+I D D HQG
Sbjct: 109 SSLALEHGKALNLTGGYHHAFANFGSGFCLFNDLYLAALNVLQTPTIRKVLIFDCDVHQG 168
Query: 204 NGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVA 263
+G K S++ RV+ + + + +P ++ D + GTT +EYL + AL A
Sbjct: 169 DGTAKLASNNKRVFTVSIHSEKNFP---HRKQVSDLDFPLAKGTTDDEYLAIVKRALSQA 225
Query: 264 GHTFDPELVIYNAGTDILEGDPLGMLKV 291
F P+ VIY+AG DI D LG L +
Sbjct: 226 FTEFQPDAVIYDAGVDIHINDDLGHLHI 253
>gi|416241930|ref|ZP_11633064.1| histone deacetylase family protein [Moraxella catarrhalis BC7]
gi|326571491|gb|EGE21506.1| histone deacetylase family protein [Moraxella catarrhalis BC7]
Length = 301
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 118/243 (48%), Gaps = 19/243 (7%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F +K+ I + L ++G + ++ + P S++++L H+ Y L++ E
Sbjct: 18 HRFPMAKYDLIPKKLLTDGIITQDNLFHPELLSEQEILSTHTADYWHKLKTGTLTDK--E 75
Query: 114 VPPVAL-FPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFC 172
+ + L L++R+ R T A AKE G +++V GG HH AD G GFC
Sbjct: 76 IRKIGLPMSASLIKRE-----RYITHATYECALYAKEYGISLSVSGGTHHGFADHGEGFC 130
Query: 173 AYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYE 232
+ D+ + + + R++ +DLD HQGNG+ +++ V++ M YP
Sbjct: 131 VFNDVCVASNLLLARGQAKRILSVDLDVHQGNGNASIMANNPAVFVFSMHGKKNYP---- 186
Query: 233 ARRFI----DQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGM 288
FI D +E+ GT N YL L + L H FDP+++ Y AG D+L D LG
Sbjct: 187 ---FIKPPSDLDIELDDGTDDNAYLTILGKTLPKIIHNFDPDMLFYQAGVDVLATDKLGK 243
Query: 289 LKV 291
L +
Sbjct: 244 LSL 246
>gi|406706584|ref|YP_006756937.1| histone deacetylase family protein [alpha proteobacterium HIMB5]
gi|406652360|gb|AFS47760.1| histone deacetylase family protein [alpha proteobacterium HIMB5]
Length = 297
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 126/259 (48%), Gaps = 19/259 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LP++ DY F I H F +K+ + ++L + + + + P S E L H
Sbjct: 3 LPVVNHKDY---FAKIGDDHKFPINKFSELAKYLKEKKIVKE--FINPSPCSIETLSKAH 57
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
S Y+ +++ N ++ + FP + +V+R + GGT+L+AKLA + G
Sbjct: 58 SLDYINNIK---NKTLGKDGVKKIGFPLVDSVVKRSFI-----ATGGTVLSAKLAIKSGI 109
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
+ N GG HH + D G G+C + D+++ Y + ++++I+DLD HQGNG+ F
Sbjct: 110 SCNTAGGSHHANFDGGAGYCVFNDVAVAAKYLIERGLANKILIVDLDVHQGNGNADIFKD 169
Query: 213 DSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELV 272
D+ V+ M + YP + + VE+ T YL KL + L+ F + V
Sbjct: 170 DNHVFTFSMHSKTNYP---AKKSLSNYDVELEDNTEDKIYLDKLKQCLQELNQYF-FDFV 225
Query: 273 IYNAGTDILEGDPLGMLKV 291
Y AG DI D LG LK+
Sbjct: 226 FYIAGVDIHYNDRLGKLKI 244
>gi|148240071|ref|YP_001225458.1| histone deacetylase family protein [Synechococcus sp. WH 7803]
gi|147848610|emb|CAK24161.1| Histone deacetylase family protein [Synechococcus sp. WH 7803]
Length = 304
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 118/266 (44%), Gaps = 26/266 (9%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
K PL+Y Y + H F +K+ + + L G + PL + L +
Sbjct: 1 MKPPLVYHEAYSAP---LPSSHRFPMAKFRELERCLFECGLAHAGQMHRPLPVPRRWLEL 57
Query: 93 VHSESYLKSL-------QSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK 145
VH SY ++ Q+ + + P LVQR L VGGT+L A+
Sbjct: 58 VHQRSYHEAFARDRLDRQAQRRIGLPATTP--------LVQRTWL-----AVGGTVLTAR 104
Query: 146 LAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
LA G A ++ GG HH + G GFC + D+++C Q + RV+++DLD HQG+
Sbjct: 105 LALRHGLACHLAGGTHHAFPNFGSGFCIFNDLAVCARVLIEQEGLQRVLVVDLDVHQGDA 164
Query: 206 HEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGH 265
FS D+RV+ L +P ++ D + + G YL+ + + L
Sbjct: 165 TALIFSGDARVFTLSAHAASNFP---SRKQVSDLDLPLSDGLEDRAYLQTVGDHLPDVLD 221
Query: 266 TFDPELVIYNAGTDILEGDPLGMLKV 291
P+LV+YNAG D D LG L +
Sbjct: 222 RLRPQLVLYNAGVDPHRDDRLGRLAL 247
>gi|340788226|ref|YP_004753691.1| Deacetylase [Collimonas fungivorans Ter331]
gi|340553493|gb|AEK62868.1| Deacetylase [Collimonas fungivorans Ter331]
Length = 311
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 89/179 (49%), Gaps = 13/179 (7%)
Query: 125 VQRKVLYPF--------RKQVGGTILA--AKLAKERGWAINVGGGFHHCSADEGGGFCAY 174
VQ+ + +P+ R+ G TI A A L A+N+ GG HH AD+G GFC +
Sbjct: 72 VQKAIGFPWTPQMVERSRRSAGATIAACRAALTDPGRIAVNLAGGTHHAFADQGAGFCVF 131
Query: 175 ADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEAR 234
D ++ + + RV I+DLD HQGNG ++D V+ L + YP D E
Sbjct: 132 NDAAIAARLMQAERRVQRVAIVDLDVHQGNGTASILANDDSVFTLSLHGERNYPFDKERS 191
Query: 235 RFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKVKW 293
D V + GT YL L +AL F P+L+I+ AG D EGD LG LK+ +
Sbjct: 192 ---DLDVALADGTGDQAYLSALQDALAAMLERFSPQLIIFLAGADPHEGDRLGRLKLSF 247
>gi|108803993|ref|YP_643930.1| histone deacetylase superfamily protein [Rubrobacter xylanophilus
DSM 9941]
gi|108765236|gb|ABG04118.1| histone deacetylase superfamily [Rubrobacter xylanophilus DSM 9941]
Length = 301
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 100/213 (46%), Gaps = 13/213 (6%)
Query: 81 EPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFP--NCLVQRKVLYPFRKQVG 138
EP A EDLL HS SYL+ + S S+ + FP LV+R R+ G
Sbjct: 42 EPRRAKDEDLLRAHSPSYLRRVVSG---SLGKQELRRLGFPWSERLVERS-----RRAAG 93
Query: 139 GTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDL 198
GTI A A E G A N+ GG HH AD G GFC + D ++ I + R +ID
Sbjct: 94 GTIDACLAALEEGIAANLAGGTHHAFADRGEGFCVFNDAAVAIRAVQAAGLVERAAVIDT 153
Query: 199 DAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDE 258
D HQG+G F++D V+ + YP + R D V + G +L+ L E
Sbjct: 154 DVHQGDGTAAIFAADGSVFTFSVHGEKNYP--FRKGR-SDLDVGLPDGADDGAFLEALSE 210
Query: 259 ALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
LE F P+L +Y AG D GD LG L V
Sbjct: 211 GLERVLEGFRPQLAVYLAGADPFAGDRLGRLAV 243
>gi|126660711|ref|ZP_01731810.1| histone deacetylase/AcuC/AphA family protein [Cyanothece sp.
CCY0110]
gi|126618009|gb|EAZ88779.1| histone deacetylase/AcuC/AphA family protein [Cyanothece sp.
CCY0110]
Length = 305
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 118/262 (45%), Gaps = 18/262 (6%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LP++Y Y + + H F K+ + + L E + N I P K L +
Sbjct: 1 MNLPIVYHDQYVVP---LPDGHRFPMEKFSLLYELLLREKVVKSNNIYTPECPEKSLLEL 57
Query: 93 VHSESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
VH Y+ + S V I +P + LV+R + VGGTIL AKLA +
Sbjct: 58 VHCPDYITAYCQGTLSDKVQRRIGLP----WSEALVKRTCV-----AVGGTILTAKLALK 108
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKD 209
G A N GG HH D G GFC + D+++ + V+IIDLD HQG+G K
Sbjct: 109 FGLACNTAGGTHHAFPDYGSGFCIFNDLAIATRVLQKLKLVKTVLIIDLDVHQGDGTAKI 168
Query: 210 FSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDP 269
F +D V+ M +PR+ + D V + G + YL+ L + L P
Sbjct: 169 FQNDLTVFTFSMHCEANFPREKQKS---DLDVSLPQGLDDDGYLQILSQHLSDLLSQIKP 225
Query: 270 ELVIYNAGTDILEGDPLGMLKV 291
+L++Y+AG DI D G L +
Sbjct: 226 DLILYDAGVDIHANDHFGKLSI 247
>gi|334121393|ref|ZP_08495463.1| Histone deacetylase [Microcoleus vaginatus FGP-2]
gi|333455107|gb|EGK83768.1| Histone deacetylase [Microcoleus vaginatus FGP-2]
Length = 305
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 123/260 (47%), Gaps = 18/260 (6%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LP+IY DY + H F +K+ + Q L ++G DK+ P +E + +VH
Sbjct: 3 LPIIYHEDY---VAPLPPDHRFPMAKFRMLYQMLLADGVADKSQFHAPELPPQEWIELVH 59
Query: 95 SESYLKSLQSSP---NVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
SY+++ + + I +P + LV R V GT+L AKLA + G
Sbjct: 60 DHSYVQAYCNGTLDNKATRRIGLP----WSRALVNRTC-----TAVAGTVLTAKLALDYG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A N GG HH G GFC + D+++ + +V+I+DLD HQG+G F
Sbjct: 111 LACNTAGGTHHAFPAFGSGFCIFNDLAIASRVLQKNGLVRKVLIVDLDVHQGDGTAVIFQ 170
Query: 212 SDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPEL 271
DS V+ M +P ++ D V + G +EYL+ LD+ L T P+L
Sbjct: 171 DDSSVFTFSMHCEVNFP---GTKQKGDLDVPLPVGMEDDEYLQTLDKFLPDLLSTVKPDL 227
Query: 272 VIYNAGTDILEGDPLGMLKV 291
V+Y+AG D GD LG L +
Sbjct: 228 VLYDAGVDPHHGDKLGKLAL 247
>gi|94970928|ref|YP_592976.1| histone deacetylase superfamily protein [Candidatus Koribacter
versatilis Ellin345]
gi|94552978|gb|ABF42902.1| histone deacetylase superfamily [Candidatus Koribacter versatilis
Ellin345]
Length = 357
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 127/294 (43%), Gaps = 48/294 (16%)
Query: 30 IPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKED 89
+ + L+YS Y + H F + K+ + Q L EG + P A++ D
Sbjct: 21 VSMLPFKLVYSDHYRLPL----GEHVFPTQKYELVKQELLEEGVASTQDFLTPTPATEAD 76
Query: 90 LLVVHSESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKL 146
+L+VHS Y+ L + + +E+P + + F GGTILAA+
Sbjct: 77 VLLVHSHFYVDKLIEGTLTAREELALEIP---------YSHEAVQAFLWHTGGTILAAER 127
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG- 205
A G A N+GGGFHH D G GFC D+++ I Q I RVM +D D HQGNG
Sbjct: 128 ALSDGVAFNLGGGFHHAYPDHGEGFCMIHDVAVAIRKLQKQGRIQRVMTLDCDVHQGNGT 187
Query: 206 -----HEKDFSSDS-----------------------RVYILDMFNPGIYPRDYEARRFI 237
+D +S++ V+ + + YP + I
Sbjct: 188 AVIFAKHRDENSEALPSRSTSTIGNRLSGTMLERGADDVFTISLHQENNYPLQ-KPPSSI 246
Query: 238 DQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
D V + GTT +EY+ LD A+ F P+L+ Y AG D + D LG L +
Sbjct: 247 D--VNLPDGTTDSEYIAWLDNAISSGFRQFQPDLLCYIAGADPYKEDQLGGLNL 298
>gi|421779567|ref|ZP_16216059.1| histone deacetylase [Moraxella catarrhalis RH4]
gi|407813277|gb|EKF84059.1| histone deacetylase [Moraxella catarrhalis RH4]
Length = 301
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 117/243 (48%), Gaps = 19/243 (7%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F +K+ I + L ++G + ++ + P S++++L H+ Y L++ E
Sbjct: 18 HRFPMAKYDLIPKKLLTDGIITQDNLFHPELLSEQEILSTHTADYWHKLKTGTLTDK--E 75
Query: 114 VPPVAL-FPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFC 172
+ + L L++R+ R T A AKE G +++V GG HH AD G GFC
Sbjct: 76 IRKIGLPMSASLIKRE-----RYITHATYECALYAKEYGISLSVSGGTHHGFADHGEGFC 130
Query: 173 AYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYE 232
+ D+ + + + R++ +DLD HQGNG+ +++ V++ M YP
Sbjct: 131 VFNDVCVASNLLLARGQAKRILSVDLDVHQGNGNASIMANNPAVFVFSMHGKKNYP---- 186
Query: 233 ARRFI----DQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGM 288
FI D +E+ GT YL L E L H FDP+++ Y AG D+L D LG
Sbjct: 187 ---FIKPPSDLDIELDDGTGDEAYLTILSETLPKIIHNFDPDMLFYQAGVDVLATDKLGK 243
Query: 289 LKV 291
L +
Sbjct: 244 LSL 246
>gi|363580001|ref|ZP_09312811.1| histone deacetylase [Flavobacteriaceae bacterium HQM9]
Length = 300
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 114/242 (47%), Gaps = 13/242 (5%)
Query: 50 IEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVS 109
++K H F K+ + + L EG K EP SK DLL VH++ Y+++L +++
Sbjct: 14 LKKGHRFPMEKYDLLPKQLLHEGTCTKENFFEPGVVSKTDLLRVHTKEYIQNLT---DLN 70
Query: 110 IIIEVPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADE 167
+ FP LV+R+ + GTI AAK A + G A+N+ GG HH ++
Sbjct: 71 LPKTEARAIGFPLSAALVEREFVI-----TQGTIDAAKFALQHGIAMNIAGGTHHAFSNR 125
Query: 168 GGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIY 227
G FC D ++ Y +++I+DLD HQGNG + F + + V+ M Y
Sbjct: 126 GEAFCLLNDQAVAAAYLLHYQLAKKILIVDLDVHQGNGTAEIFQNQANVFTFSMHGEKNY 185
Query: 228 PRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLG 287
P E D + + +GT + YLK L E L P V Y G DIL D LG
Sbjct: 186 PFRKETS---DLDMALPNGTNDDTYLKLLKEKLPELYAKVQPNFVFYLCGVDILVTDKLG 242
Query: 288 ML 289
L
Sbjct: 243 KL 244
>gi|373949015|ref|ZP_09608976.1| histone deacetylase superfamily [Shewanella baltica OS183]
gi|386325146|ref|YP_006021263.1| histone deacetylase superfamily protein [Shewanella baltica BA175]
gi|333819291|gb|AEG11957.1| histone deacetylase superfamily [Shewanella baltica BA175]
gi|373885615|gb|EHQ14507.1| histone deacetylase superfamily [Shewanella baltica OS183]
Length = 302
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 120/263 (45%), Gaps = 23/263 (8%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+PL+Y Y S L + H F ++K+ + Q+L P + +D++ VH
Sbjct: 4 IPLVYHASY--SKLALPPHHRFPTTKYTHLRQYLLDNQLATPAQFHTPTAMTAQDVMQVH 61
Query: 95 SESYLKSLQSSPNVSIIIEVPPVAL----FP--NCLVQRKVLYPFRKQVGGTILAAKLAK 148
Y++ I +P AL FP LV+R + V GT L A LA
Sbjct: 62 QREYVEQF-------IAGTLPTAALRRIGFPWSEALVERTL-----HSVAGTTLTASLAI 109
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEK 208
+G +++ GG+HH D G G+C + D+ L A + +V+I D D HQG+G
Sbjct: 110 NQGIGLHLTGGYHHAHYDFGSGYCIFNDLILAARNAIASQQVHKVLIFDCDVHQGDGSAT 169
Query: 209 DFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFD 268
+ I + +P ++ +E+ G+ N YL+ +++ L +
Sbjct: 170 LSQRHQGIIICSIHCKENFP---SRKQHSHHDIELTKGSDDNLYLETVEQTLALLIRIHQ 226
Query: 269 PELVIYNAGTDILEGDPLGMLKV 291
P+L++Y+AG DI + D LG+L +
Sbjct: 227 PDLILYDAGVDIHQNDDLGLLNI 249
>gi|94310146|ref|YP_583356.1| histone deacetylase superfamily [Cupriavidus metallidurans CH34]
gi|93353998|gb|ABF08087.1| histone deacetylase superfamily [Cupriavidus metallidurans CH34]
Length = 323
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 88/174 (50%), Gaps = 11/174 (6%)
Query: 126 QRKVLYPF--------RKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADI 177
QR++ +P+ R+ G TI A ++A E+G A N+ GG HH AD+G GFC + D
Sbjct: 89 QREIGFPWSHEMVERSRRSAGATIAACRVALEQGIAANLAGGTHHAYADKGAGFCVFNDA 148
Query: 178 SLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFI 237
++ ++ RV +IDLD HQGNG D ++ L + YP EA
Sbjct: 149 AIAARRLQRDGSVRRVAVIDLDVHQGNGTASILRDDPTIFTLSLHGEKNYPFRKEAS--- 205
Query: 238 DQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
D V + G Y L ALE FDP+L+IY AG D EGD LG LK+
Sbjct: 206 DLDVGLPDGCDDGTYAVALASALETLFARFDPDLLIYLAGADPHEGDRLGRLKL 259
>gi|126173859|ref|YP_001050008.1| histone deacetylase superfamily protein [Shewanella baltica OS155]
gi|386340619|ref|YP_006036985.1| histone deacetylase superfamily protein [Shewanella baltica OS117]
gi|125997064|gb|ABN61139.1| histone deacetylase superfamily [Shewanella baltica OS155]
gi|334863020|gb|AEH13491.1| histone deacetylase superfamily [Shewanella baltica OS117]
Length = 302
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 120/263 (45%), Gaps = 23/263 (8%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+PL+Y Y S L + H F ++K+ + Q+L P + +D++ VH
Sbjct: 4 IPLVYHASY--SKLALPPHHRFPTTKYAHLRQYLLENQLATLAQFHTPTAMTAQDVMQVH 61
Query: 95 SESYLKSLQSSPNVSIIIEVPPVAL----FP--NCLVQRKVLYPFRKQVGGTILAAKLAK 148
Y++ I +P AL FP LV+R + V GT L A LA
Sbjct: 62 QREYVEQF-------IAGTLPTAALRRIGFPWSEALVERTL-----HSVAGTTLTASLAI 109
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEK 208
+G +++ GG+HH D G G+C + D+ L A L + +V+I D D HQG+G
Sbjct: 110 NQGIGLHLTGGYHHAHYDFGSGYCIFNDLILAARNAIASLQVHKVLIFDCDVHQGDGSAT 169
Query: 209 DFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFD 268
+ + +P ++ +E+ G+ N YL+ +++ L +
Sbjct: 170 LSQRHQGIISCSIHCKENFP---SRKQHSHHDIELTKGSDDNLYLETVEQTLALLIRIHQ 226
Query: 269 PELVIYNAGTDILEGDPLGMLKV 291
P+L++Y+AG DI + D LG+L +
Sbjct: 227 PDLILYDAGVDIHQNDDLGLLNI 249
>gi|409405465|ref|ZP_11253927.1| deacetylase [Herbaspirillum sp. GW103]
gi|386434014|gb|EIJ46839.1| deacetylase [Herbaspirillum sp. GW103]
Length = 282
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 87/174 (50%), Gaps = 11/174 (6%)
Query: 126 QRKVLYPF--------RKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADI 177
QR++ +P+ R+ G TI A + A G A+N+ GG HH AD G GFC + D
Sbjct: 53 QREIGFPWSPQMVERSRRSSGATIAACRAAFSEGLAVNLAGGTHHAYADHGAGFCVFNDA 112
Query: 178 SLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFI 237
++ + +RV I+DLD HQGNG + D V+ L + YP + E
Sbjct: 113 AIAARLMQAERRAARVAIVDLDVHQGNGTASILARDESVFTLSLHGQNNYPFEKEQS--- 169
Query: 238 DQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
D V + G +YL+ L AL F P+L+IY AG D EGD LG +K+
Sbjct: 170 DLDVALPDGVGDADYLQALRLALHTLQQRFAPQLLIYLAGADPHEGDRLGKMKL 223
>gi|254293275|ref|YP_003059298.1| histone deacetylase [Hirschia baltica ATCC 49814]
gi|254041806|gb|ACT58601.1| Histone deacetylase [Hirschia baltica ATCC 49814]
Length = 300
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 119/265 (44%), Gaps = 27/265 (10%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LP+++ P YD S + H F K+ + L G N P AS E+L H
Sbjct: 2 LPIVHHPLYDAS--SVSDKHRFPMRKYSLLPLKLMEAGLAYPNSFHLPELASAEELSAAH 59
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPF--------RKQVGGTILAAKL 146
S Y+ ++ S N+ + Q+K+ + + R G++LA KL
Sbjct: 60 SVQYVAAVLSG-NL-------------DRAAQKKLGFEWSIDVSNRARASAAGSLLAGKL 105
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
A + G A N GG HH D G GFC + D+++ + + RV+I+DLD H G+G
Sbjct: 106 ALKHGAAANTAGGSHHAGYDYGAGFCVFNDVAVAVLNMLNAKLVERVLIVDLDVHHGDGS 165
Query: 207 EKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHT 266
+ F++D RV+ M +PR+ D V + G YL L +L A
Sbjct: 166 ARIFANDQRVFTFSMHCEDNWPREKPPS---DLDVGLAKGLEDEAYLAALKWSLCEALER 222
Query: 267 FDPELVIYNAGTDILEGDPLGMLKV 291
P++V YNAG D D LG+L +
Sbjct: 223 SSPQIVFYNAGVDPHIEDRLGLLNL 247
>gi|429748657|ref|ZP_19281828.1| histone deacetylase family protein [Capnocytophaga sp. oral taxon
332 str. F0381]
gi|429170214|gb|EKY11918.1| histone deacetylase family protein [Capnocytophaga sp. oral taxon
332 str. F0381]
Length = 296
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 110/243 (45%), Gaps = 18/243 (7%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLK---SLQSSPNVSI 110
H F K+ + Q L EG P +AS + L +VH Y+ LQ +
Sbjct: 17 HRFPMLKYALLPQQLLHEGIAQPTDFHTPQKASPQSLCLVHHPDYVHRFIHLQLTHK--- 73
Query: 111 IIEVPPVALFPN-CLVQRKVLYPFRKQVGGTILAAKLA-KERGWAINVGGGFHHCSADEG 168
E P+ N LV+R++ V GTI A A + R A N+ GG HH +D G
Sbjct: 74 --EALPIGFVQNEQLVERELTL-----VQGTIDGALWALQHRQVAFNIAGGTHHAFSDRG 126
Query: 169 GGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
GFC D ++ Y + R++IIDLD HQGNG + F++D RV+ M YP
Sbjct: 127 EGFCMLNDQAVAAGYLLAHTAVQRILIIDLDVHQGNGTAQIFANDPRVFTFSMHAQHNYP 186
Query: 229 RDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGM 288
E + + +GTT YL+ L + L P+ V Y +G D+L D LG
Sbjct: 187 FQKEQSSL---DIPLPNGTTDEVYLRILQDTLPQLIAQHQPQFVFYQSGVDVLATDKLGK 243
Query: 289 LKV 291
L +
Sbjct: 244 LSL 246
>gi|407700796|ref|YP_006825583.1| histone deacetylase family protein [Alteromonas macleodii str.
'Black Sea 11']
gi|407249943|gb|AFT79128.1| histone deacetylase family protein [Alteromonas macleodii str.
'Black Sea 11']
Length = 273
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 94/173 (54%), Gaps = 11/173 (6%)
Query: 127 RKVLYPFRKQ--------VGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADIS 178
R++ +P+ +Q V GT L AKLA E G A+N+ GG+HH AD G GFC + D+
Sbjct: 51 RRIGFPWSEQLIERTRTAVAGTCLTAKLALEHGKALNLTGGYHHAFADFGSGFCLFNDLY 110
Query: 179 LCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFID 238
L +I V+I+DLD HQG+G K +D ++ L + +P + R ID
Sbjct: 111 LAAKTMLQTPSIENVLIVDLDVHQGDGTAKLAENDRDIFTLSIHGEKNFPH-RKQRSDID 169
Query: 239 QKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ + GT +EYL L++AL + F P+ +IY+AG D+ D LG L +
Sbjct: 170 --IGLDKGTEDDEYLTTLEQALTMVMRQFQPDAIIYDAGVDVHVNDDLGHLHI 220
>gi|393776833|ref|ZP_10365127.1| histone deacetylase [Ralstonia sp. PBA]
gi|392716190|gb|EIZ03770.1| histone deacetylase [Ralstonia sp. PBA]
Length = 310
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/221 (33%), Positives = 107/221 (48%), Gaps = 19/221 (8%)
Query: 78 CIVEPLEASKEDLLVVHSESYLKSLQSS---PNVSIIIEVPPVALFPNCLVQRKVLYPFR 134
+ E AS DLL+ H++ Y++ + + P I P + +V+R R
Sbjct: 39 ALREAPRASDADLLLAHTDEYVQKVSAGTLEPARQREIGFP----WSEAMVERS-----R 89
Query: 135 KQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHY----AFVQLNI 190
+ G TI A + A G A+N+ GG HH AD+GGGFC + D ++ A +
Sbjct: 90 RSAGATIAACRQAMRDGIAVNLAGGTHHAYADKGGGFCVFNDSAIAARRLQQDADAEGRQ 149
Query: 191 SRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTN 250
RV +IDLD HQGNG D+ V+ L + YP EA D V + G +
Sbjct: 150 LRVAVIDLDVHQGNGTASILRDDATVFTLSLHGERNYPFRKEAS---DLDVGLPDGCSDA 206
Query: 251 EYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+YL L AL++ F P L+IY AG D EGD LG L++
Sbjct: 207 QYLDALQGALDLMLGRFVPGLLIYLAGADPHEGDGLGRLRL 247
>gi|149276367|ref|ZP_01882511.1| deacetylase [Pedobacter sp. BAL39]
gi|149232887|gb|EDM38262.1| deacetylase [Pedobacter sp. BAL39]
Length = 299
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/244 (32%), Positives = 114/244 (46%), Gaps = 26/244 (10%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ I Q L +G++ + P ++E +L H Y + L+ ++
Sbjct: 18 HRFPMLKYELIPQQLLHQGWISSEQLFAPDLLNEELVLRSHDPKYWEHLK-------MLS 70
Query: 114 VPPVALFPNCLVQRKVLYPFRKQV--------GGTILAAKLAKERGWAINVGGGFHHCSA 165
+PP QR++ P +Q+ GT+ A A E G A NV GG HH +
Sbjct: 71 LPPKD-------QRRIGLPLSRQLVERELRIAQGTVEGALHALEDGIAFNVAGGTHHAGS 123
Query: 166 DEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
D G GFC D ++ +Y + + RV+IIDLD HQGNG + F+ D RV+ M
Sbjct: 124 DWGEGFCLLNDQAIAANYLLDKGLVGRVLIIDLDVHQGNGTAEIFADDRRVFTFSMHGDK 183
Query: 226 IYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDP 285
+P E D + + G E+LKKL E L H P+ V Y +G DIL+ D
Sbjct: 184 NFPFRKERS---DLDIPLADGVGDAEFLKKLAEVLPGLMH-HKPDFVFYLSGVDILDSDR 239
Query: 286 LGML 289
LG L
Sbjct: 240 LGKL 243
>gi|427420410|ref|ZP_18910593.1| deacetylase, histone deacetylase/acetoin utilization protein
[Leptolyngbya sp. PCC 7375]
gi|425763123|gb|EKV03976.1| deacetylase, histone deacetylase/acetoin utilization protein
[Leptolyngbya sp. PCC 7375]
Length = 305
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 118/265 (44%), Gaps = 28/265 (10%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LP+IY PDY + H F K+ + L +G + + I +P ++ L +VH
Sbjct: 4 LPVIYHPDY---VTPLPAGHRFPMPKFQLLRDLLVRDGVISEEQIYQPGRPPRDWLELVH 60
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQ--------VGGTILAAKL 146
Y+++ + QR++ P+ + VGGTIL AKL
Sbjct: 61 DSPYVQAYCDGGL--------------DAKAQRRIGLPWSAELVRRTCTAVGGTILTAKL 106
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
A +G A N GG HH G GFC + DI++ Q + V+++DLD HQG+G
Sbjct: 107 ALNQGLACNTAGGTHHAFPGYGAGFCIFNDIAIATRLLKAQNLLQTVLVVDLDVHQGDGT 166
Query: 207 EKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHT 266
F D V+ M +P ++ D V + GT +EYL KL+ L
Sbjct: 167 AWIFRDDPSVFTFSMHCAVNFP---GRKQTSDLDVPLDEGTEDDEYLAKLEAHLPDLLAQ 223
Query: 267 FDPELVIYNAGTDILEGDPLGMLKV 291
P+LV+Y+AG D D LG L +
Sbjct: 224 VKPDLVLYDAGADPHRDDRLGKLAL 248
>gi|319953397|ref|YP_004164664.1| histone deacetylase [Cellulophaga algicola DSM 14237]
gi|319422057|gb|ADV49166.1| Histone deacetylase [Cellulophaga algicola DSM 14237]
Length = 300
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 110/240 (45%), Gaps = 13/240 (5%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F +K+ + Q L EG K EP + + +L VH Y L N+ I +
Sbjct: 18 HRFPMAKYDLLPQQLIYEGTCKKENFFEPEIPNDKYILAVHDAEYYYDLL---NIKIDQK 74
Query: 114 VPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGF 171
FP L++R+ R GGTI + A E G A+N+ GG HH +D G F
Sbjct: 75 AARKIGFPLSEDLIERE-----RIITGGTIKGCEFAIENGVAMNLAGGTHHAYSDHGEAF 129
Query: 172 CAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDY 231
C D S+ Y + ++++I+DLD HQGNG + F +D+ V+ M YP
Sbjct: 130 CMLNDQSIGARYLQAKKLAAQILIVDLDVHQGNGTAEIFQNDTSVFTFSMHGESNYPFRK 189
Query: 232 EARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
EA D + + GT EYL L + L P+ + Y +G D+L D LG L +
Sbjct: 190 EAS---DLDIALKKGTEDKEYLSLLKKTLPALITAVKPDFIFYLSGVDVLASDKLGTLAL 246
>gi|338213016|ref|YP_004657071.1| histone deacetylase superfamily protein [Runella slithyformis DSM
19594]
gi|336306837|gb|AEI49939.1| histone deacetylase superfamily [Runella slithyformis DSM 19594]
Length = 305
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 122/267 (45%), Gaps = 24/267 (8%)
Query: 28 FDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASK 87
FD PI+ PL P+ + H F K+ I + L EG + P +
Sbjct: 6 FD-PIYCHPLPVGPN--------GEPHRFPMLKYELIPEQLLYEGSCTSDNFFSPGTLDE 56
Query: 88 EDLLVVHSESY---LKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAA 144
+L VH+ +Y LK L+ S + I P A L++R+ + GTI
Sbjct: 57 RWILDVHTRAYWEDLKQLRISEKMVRRIGFPLSAR----LIERET-----RIAQGTIECT 107
Query: 145 KLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
A G ++NV GG HH AD G GFC D+++ +Y ++S++++IDLD HQGN
Sbjct: 108 HHALTHGVSMNVAGGTHHAYADRGEGFCLLNDVAIAANYLLKNKSVSKILVIDLDVHQGN 167
Query: 205 GHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAG 264
G F ++ RV+ M YP E D + + +GT EYL+ L + L
Sbjct: 168 GTAVIFQNEPRVFTFSMHGKDNYPLHKEVS---DLDIALPTGTQDEEYLQLLTDTLPALI 224
Query: 265 HTFDPELVIYNAGTDILEGDPLGMLKV 291
P+ Y +G DIL D LG LKV
Sbjct: 225 KAQKPDFAFYISGVDILGTDKLGKLKV 251
>gi|409990645|ref|ZP_11273991.1| histone deacetylase superfamily protein [Arthrospira platensis str.
Paraca]
gi|409938497|gb|EKN79815.1| histone deacetylase superfamily protein [Arthrospira platensis str.
Paraca]
Length = 305
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 122/265 (46%), Gaps = 24/265 (9%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LP+++ PDY + H F K+G +C L EG + ++ + P E + +
Sbjct: 1 MNLPIVFHPDY---VAPLPPGHRFPMPKFGLLCDMLLEEGVIRRSQLHLPKLPPTEWIEL 57
Query: 93 VHSESYLKSLQSS---PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
VH Y+K P I +P + L QR + VGG IL AKLA
Sbjct: 58 VHHRDYVKGYCEGTLDPKAQRRIGLP----WSPALAQRTCI-----AVGGAILTAKLALS 108
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISL--CIHYAFVQLNIS-RVMIIDLDAHQGNGH 206
G A N GG HH + G GFC + D+++ C+ +L ++ +++I+DLD HQG+
Sbjct: 109 HGLACNTAGGTHHAFPNYGSGFCIFNDMAIAACV---MQKLGLAKKILIVDLDVHQGDAT 165
Query: 207 EKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHT 266
F + V+ M +P ++ D+ + + G EYL+ L L
Sbjct: 166 AVIFQDNPHVFTFSMHCQANFP---AKKQTSDRDIPLAVGMEDEEYLQILASHLPDLLTE 222
Query: 267 FDPELVIYNAGTDILEGDPLGMLKV 291
F P+LVIY+AG D GD LG L +
Sbjct: 223 FRPDLVIYDAGVDPHIGDRLGKLAL 247
>gi|88859197|ref|ZP_01133837.1| putative histone deacetylase family protein [Pseudoalteromonas
tunicata D2]
gi|88818214|gb|EAR28029.1| putative histone deacetylase family protein [Pseudoalteromonas
tunicata D2]
Length = 302
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 122/263 (46%), Gaps = 21/263 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPL+Y P+Y F + H F SK+ + Q L G+++ N I +PL AS +L VH
Sbjct: 7 LPLVYHPNYSFEF---DPNHRFVMSKFADLYQHLVQTGYVNHN-IFKPLRASISELEKVH 62
Query: 95 SESYLKSLQSSP---NVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
YL L + S I +P + L+ R + + GT+L A+LA + G
Sbjct: 63 CSRYLHQLNQNTLDQKASRRIGLP----WSEQLMARTFI-----EAQGTLLTAQLALKNG 113
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A ++ GG HH D G GFC D++ +++ V+I DLD HQG+G
Sbjct: 114 IACHLAGGTHHAHYDFGSGFCMVNDLAYTAASLIDSGDVTNVLIFDLDVHQGDGTAAILQ 173
Query: 212 SDSRVYILDMFNPGIYP-RDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPE 270
++ + +P R ++ D + + G + YL ++ L +P
Sbjct: 174 HHPYIFTCSIHCEKNFPFRKSQS----DLDIGLAIGMQDDAYLALIESTLRSLIADLNPS 229
Query: 271 LVIYNAGTDILEGDPLGMLKVKW 293
LV+Y+AG DI + D LG L + W
Sbjct: 230 LVLYDAGVDIWQHDSLGKLDISW 252
>gi|291570560|dbj|BAI92832.1| histone deacetylase family protein [Arthrospira platensis NIES-39]
Length = 305
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 122/265 (46%), Gaps = 24/265 (9%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LP+++ PDY + H F K+G +C L EG + ++ + P E + +
Sbjct: 1 MNLPIVFHPDY---VAPLPPGHRFPMPKFGLLCDMLLEEGVIRRSQLHLPKLPPTEWIEL 57
Query: 93 VHSESYLKSLQSS---PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
VH Y+K P I +P + L QR + VGG IL AKLA
Sbjct: 58 VHHRDYVKGYCEGTLDPKAQRRIGLP----WSPALAQRTCI-----AVGGAILTAKLALS 108
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISL--CIHYAFVQLNIS-RVMIIDLDAHQGNGH 206
G A N GG HH + G GFC + D+++ C+ +L ++ +++I+DLD HQG+
Sbjct: 109 HGLACNTAGGTHHAFPNYGSGFCIFNDMAIAACV---MQKLGLAKKILIVDLDVHQGDAT 165
Query: 207 EKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHT 266
F + V+ M +P ++ D+ + + G EYL+ L L
Sbjct: 166 AVIFQDNPHVFTFSMHCQANFP---AKKQTSDRDIPLAVGMEDEEYLQILASHLPDLLTE 222
Query: 267 FDPELVIYNAGTDILEGDPLGMLKV 291
F P+LVIY+AG D GD LG L +
Sbjct: 223 FRPDLVIYDAGVDPHIGDRLGKLAL 247
>gi|428201494|ref|YP_007080083.1| deacetylase [Pleurocapsa sp. PCC 7327]
gi|427978926|gb|AFY76526.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pleurocapsa sp. PCC 7327]
Length = 308
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 121/263 (46%), Gaps = 20/263 (7%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LP++Y PDY + + H F SK+ + + L ++G +C+ P S+E + +
Sbjct: 1 MSLPIVYHPDY---IAPLPEGHRFPMSKFKLLYELLLADGIAQLDCVYRPEVPSRELIEL 57
Query: 93 VHSESYLKSLQSS---PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
VH Y+++ P I +P + L R + VGGTIL A+LA +
Sbjct: 58 VHLPEYVRAYCEGTLDPKAQRRIGLP----WSPALANRTCV-----AVGGTILTAQLALQ 108
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLN-ISRVMIIDLDAHQGNGHEK 208
G A N GG HH G GFC + D+++ QL + +V+I+DLD HQG+G
Sbjct: 109 YGLACNTAGGTHHAFPGYGSGFCIFNDLAIATR-VLQQLGLVKKVLIVDLDVHQGDGTAC 167
Query: 209 DFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFD 268
F D V+ M +P + + D V + G + YL L + L
Sbjct: 168 IFQDDPSVFTFSMHCEANFPNNKQKS---DLDVPLPVGLDDDGYLHILAKYLSDVLSQVQ 224
Query: 269 PELVIYNAGTDILEGDPLGMLKV 291
P+LV+Y+AG D D LG L +
Sbjct: 225 PDLVLYDAGVDTHASDRLGKLAL 247
>gi|227539670|ref|ZP_03969719.1| possible histone deacetylase [Sphingobacterium spiritivorum ATCC
33300]
gi|227240312|gb|EEI90327.1| possible histone deacetylase [Sphingobacterium spiritivorum ATCC
33300]
Length = 334
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 108/241 (44%), Gaps = 15/241 (6%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSL-QSSPNVSIII 112
H F K+ I L EG + K+ EP S+E + H ESY++ L + + + +I
Sbjct: 51 HRFPMLKYELIPMQLIHEGLVSKDSFFEPELISEEIACLAHDESYVRDLFELTLDARMIR 110
Query: 113 EVPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGG 170
+ FP + L++R+ R V GTI A A + G A NV GG HH G G
Sbjct: 111 RIG----FPLTDSLIRRE-----RLIVDGTIRTALFAMQYGIAFNVAGGTHHAGHAYGEG 161
Query: 171 FCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRD 230
FC D ++ Y + + +++IIDLD HQGNG F V+ M +P
Sbjct: 162 FCLLNDQAIAAAYLLAEQKVHKILIIDLDVHQGNGTANIFKGSKEVFTFSMHGAKNFPFI 221
Query: 231 YEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLK 290
E + + G T YL +L L P+ V Y AG D+L D LG LK
Sbjct: 222 KEQSHL---DINLEDGITDKNYLSQLTTVLPDLFEKVAPDFVFYQAGVDVLATDKLGKLK 278
Query: 291 V 291
+
Sbjct: 279 L 279
>gi|170728227|ref|YP_001762253.1| histone deacetylase superfamily protein [Shewanella woodyi ATCC
51908]
gi|169813574|gb|ACA88158.1| histone deacetylase superfamily [Shewanella woodyi ATCC 51908]
Length = 305
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 125/266 (46%), Gaps = 24/266 (9%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKN-----CIVEPLEASKED 89
LPLIY P Y S L + + H + K+ + F+ + D N P + ++
Sbjct: 2 LPLIYHPMY--SHLSLPEGHRYPIMKYQYLYDFIIKKSETDSNWQQRLAFFSPKALTADE 59
Query: 90 LLVVHSESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKL 146
+ VH + Y++ L + + N I P + L+QR + GT+LAA
Sbjct: 60 VKQVHGDEYVEQLMTGTLAANKMRRIGFP----WSEELMQRTL-----TSAAGTVLAAIK 110
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
A E G AI++ GG+HH D G GFC D+ L H+ + NI +V+IID D HQG+G
Sbjct: 111 AIEHGVAIHLSGGYHHAHKDFGSGFCLLNDLVLAAHFGLQRENIDKVLIIDSDVHQGDGT 170
Query: 207 EKDFSSDSRVYILDMFNPGIYPRDYEARR-FIDQKVEVVSGTTTNEYLKKLDEALEVAGH 265
+ L +P AR+ D + + GT + +L + +E+A +
Sbjct: 171 ATLCQERDDIITLSFHCDKNFP----ARKPDSDLDLPLTRGTDDDSFLATFKQVVEMAVN 226
Query: 266 TFDPELVIYNAGTDILEGDPLGMLKV 291
P+L+IY+AG DI + D LG L +
Sbjct: 227 LHQPDLIIYDAGVDIHQDDELGYLNI 252
>gi|256425815|ref|YP_003126468.1| histone deacetylase superfamily protein [Chitinophaga pinensis DSM
2588]
gi|256040723|gb|ACU64267.1| histone deacetylase superfamily [Chitinophaga pinensis DSM 2588]
Length = 299
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/241 (33%), Positives = 109/241 (45%), Gaps = 15/241 (6%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQS---SPNVSI 110
H F K+ I L EG + + + P A + +L+ H+ Y + LQ S
Sbjct: 17 HRFPMVKYELIPAQLLREGIISEQQLHIPAPAEESTILLTHTAHYWQQLQHQTLSDKEQR 76
Query: 111 IIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGG 170
I +P L R+++ GTI A A E G A+NV GG HH AD G G
Sbjct: 77 RIGLPQSP----ALTLREIVIS-----QGTIDCALHAMEHGVALNVAGGTHHAFADRGEG 127
Query: 171 FCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRD 230
FC D ++ +Y Q + +V+IIDLD HQGNG F VY M YP
Sbjct: 128 FCLLNDFAIAANYLLHQQLVKKVLIIDLDVHQGNGTAALFEGRPEVYTFSMHGAHNYPFH 187
Query: 231 YEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLK 290
E D V + G +YL+ L E L V + P++V Y +G DIL+ D G L+
Sbjct: 188 KEVS---DWDVPLPDGMNDVDYLRTLGECLPVLINKVKPDIVFYLSGVDILQTDRYGKLQ 244
Query: 291 V 291
V
Sbjct: 245 V 245
>gi|416228420|ref|ZP_11627574.1| histone deacetylase family protein [Moraxella catarrhalis 46P47B1]
gi|326563755|gb|EGE14006.1| histone deacetylase family protein [Moraxella catarrhalis 46P47B1]
Length = 301
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 118/243 (48%), Gaps = 19/243 (7%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F +K+ I + L ++G + ++ + P S++++L H+ Y L++ E
Sbjct: 18 HRFPMAKYDLIPKKLLTDGIITQDNLFHPELLSEQEILSTHTADYWHKLKTGTLTDK--E 75
Query: 114 VPPVAL-FPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFC 172
+ + L L++R+ R T A AK+ G +++V GG HH AD G GFC
Sbjct: 76 IRKIGLPMSASLIKRE-----RYITHATYECALYAKKYGISLSVSGGTHHGFADHGEGFC 130
Query: 173 AYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYE 232
+ D+ + + + R++ +DLD HQGNG+ +++ V++ M YP
Sbjct: 131 VFNDVCVASNLLLARGQAKRILSVDLDVHQGNGNASIMANNPAVFVFSMHGKKNYP---- 186
Query: 233 ARRFI----DQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGM 288
FI D +E+ GT N YL L + L H FDP+++ Y AG D+L D LG
Sbjct: 187 ---FIKPPSDLDIELDDGTDDNAYLTILGKTLPKIIHNFDPDMLFYQAGVDVLATDKLGK 243
Query: 289 LKV 291
L +
Sbjct: 244 LSL 246
>gi|209809743|ref|YP_002265282.1| hypothetical protein VSAL_II0998 [Aliivibrio salmonicida LFI1238]
gi|208011306|emb|CAQ81752.1| conserved hypothetical protein [Aliivibrio salmonicida LFI1238]
Length = 300
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 128/264 (48%), Gaps = 25/264 (9%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY P Y S L + + H + K+ R+ Q + S D+ C EP D+ VH
Sbjct: 2 LPLIYHPIY--SQLDLPEGHRYPIQKYQRLYQAIQSLHSDDRLCYFEPTALPIRDIKQVH 59
Query: 95 SESYLKSLQSSPNVSIIIEVPPVAL----FP--NCLVQRKVLYPFRKQVGGTILAAKLAK 148
+Y+ ++ + +P + FP + L++R + GT L A
Sbjct: 60 ETNYVDAVVNG-------TLPAAKMRRIGFPWSDFLIERTL-----TSTAGTCLTVDKAV 107
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEK 208
E G AI++ GG+HH D G GFC + D+ + H+A Q I V+I+D D H G+G
Sbjct: 108 EYGAAIHLSGGYHHAHYDFGSGFCLFNDLVVAAHHALKQECIETVLIVDSDVHHGDG-TA 166
Query: 209 DFSSDSRVYILDMFNPGIYPRDYEARR-FIDQKVEVVSGTTTNEYLKKLDEALEVAGHTF 267
+D I F+ +++ AR+ + V + GT +E+L+ + +E+A +
Sbjct: 167 TLCADKDDIITVSFHCD---KNFPARKPMSNYDVPLFIGTQDDEFLEAFQQVVEMAINHH 223
Query: 268 DPELVIYNAGTDILEGDPLGMLKV 291
P+L+IY+AG DI D LG L V
Sbjct: 224 QPDLIIYDAGVDIHCDDELGYLNV 247
>gi|410637975|ref|ZP_11348545.1| histone deacetylase/AcuC/AphA family protein [Glaciecola lipolytica
E3]
gi|410142661|dbj|GAC15750.1| histone deacetylase/AcuC/AphA family protein [Glaciecola lipolytica
E3]
Length = 300
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 126/265 (47%), Gaps = 28/265 (10%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+PL++ P Y S L + H F K+ I L G + + +P + ++L V
Sbjct: 2 IPLVFHPIY--SILDLPVRHRFPIQKYQAIYSQLRELG-VPETQFYQPEPVAIDNLKQVF 58
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTILAAKL 146
+ Y++ L S + R++ +P+ +Q+ GGT+LA++L
Sbjct: 59 NPLYIQELTSGK--------------LDAKAMRRIGFPWSEQLITRTLTAAGGTLLASQL 104
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
A E G AIN+ GG+HH A+ G GFC D+ L I RV+I D D HQG+G
Sbjct: 105 ALEYGKAINLTGGYHHAFANFGSGFCMVNDLYLSALQMLRHPQIDRVLIFDCDVHQGDGT 164
Query: 207 EKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHT 266
K ++ + + + +P + D + GTT +YL +D AL +A ++
Sbjct: 165 AKLAENNPNIKTVSIHGEKNFPHRKQQS---DLDFPLPKGTTDFDYLDTVDCALNLAINS 221
Query: 267 FDPELVIYNAGTDILEGDPLGMLKV 291
F P+ VIY+AG D+ E D LG L +
Sbjct: 222 FQPDAVIYDAGVDVHENDDLGHLLI 246
>gi|416254189|ref|ZP_11638623.1| histone deacetylase family protein [Moraxella catarrhalis O35E]
gi|326577638|gb|EGE27515.1| histone deacetylase family protein [Moraxella catarrhalis O35E]
Length = 301
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 118/243 (48%), Gaps = 19/243 (7%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F +K+ I + L ++G + ++ + P S++++L H+ Y L++ E
Sbjct: 18 HRFPMAKYDLIPKKLLTDGIITQDNLFHPELLSEQEILSTHTADYWHKLKTGTLTDK--E 75
Query: 114 VPPVAL-FPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFC 172
+ + L L++R+ R T A AK+ G +++V GG HH AD G GFC
Sbjct: 76 IRKIGLPMSASLIKRE-----RYITHATYECALYAKKYGISLSVSGGTHHGFADHGEGFC 130
Query: 173 AYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYE 232
+ D+ + + + R++ +DLD HQGNG+ +++ V++ M YP
Sbjct: 131 VFNDVCVASNLLLARGQAKRILSVDLDVHQGNGNASIMANNPAVFVFSMHGKKNYP---- 186
Query: 233 ARRFI----DQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGM 288
FI D +E+ GT N YL L + L H FDP+++ Y AG D+L D LG
Sbjct: 187 ---FIKPPSDLDIELDDGTDDNAYLTILGKTLPKIIHNFDPDMLFYQAGVDVLATDKLGK 243
Query: 289 LKV 291
L +
Sbjct: 244 LSL 246
>gi|410625716|ref|ZP_11336491.1| histone deacetylase 11 [Glaciecola mesophila KMM 241]
gi|410154792|dbj|GAC23260.1| histone deacetylase 11 [Glaciecola mesophila KMM 241]
Length = 318
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 122/263 (46%), Gaps = 18/263 (6%)
Query: 32 IFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLL 91
+ PL++ P Y S L + H F K+ I L S G + K +P + L
Sbjct: 18 LLSTPLVFHPIY--SQLDLPFKHRFPIEKYQAIYDKLISLG-VPKAQFHQPDALTPSHLK 74
Query: 92 VVHSESYLKSLQSS---PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAK 148
V+S Y+ L P I P + L+QR + V GT++ + LA
Sbjct: 75 RVYSPDYVNGLTQGVLDPKAMRRIGFP----WSEQLIQRSL-----TAVAGTVMTSSLAL 125
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEK 208
E G A+N+ GG+HH A+ G GFC + D+ L I +V+I D D HQG+G K
Sbjct: 126 EHGKALNLTGGYHHAFANFGSGFCLFNDLYLAALNMLQTPTIRKVLIFDCDVHQGDGTAK 185
Query: 209 DFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFD 268
S++ RV+ + + +P ++ D + G T +EYL ++ AL TF
Sbjct: 186 LASNNKRVFTVSIHGEKNFP---HRKQVSDLDFPLAKGATDDEYLTVVEGALHQVFSTFQ 242
Query: 269 PELVIYNAGTDILEGDPLGMLKV 291
P+ VIY+AG DI D LG L +
Sbjct: 243 PDAVIYDAGVDIHINDDLGHLHI 265
>gi|359455670|ref|ZP_09244881.1| histone deacetylase family protein [Pseudoalteromonas sp. BSi20495]
gi|414071985|ref|ZP_11407941.1| histone deacetylase family protein [Pseudoalteromonas sp. Bsw20308]
gi|358047293|dbj|GAA81130.1| histone deacetylase family protein [Pseudoalteromonas sp. BSi20495]
gi|410805565|gb|EKS11575.1| histone deacetylase family protein [Pseudoalteromonas sp. Bsw20308]
Length = 297
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 129/259 (49%), Gaps = 16/259 (6%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+ L Y P Y S L + + H F K+ ++ + G L N P++A+ L + H
Sbjct: 1 MQLFYHPLY--SALTLPERHRFPIQKYQKLKAEIEGLG-LTPNNFTSPIKATPAQLSLCH 57
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
+++Y+ + N ++ + FP N LV+R +L VG +I +++ A + G+
Sbjct: 58 NQTYINNFL---NGTLSNKAIKKMGFPYSNELVERTLL-----SVGASIQSSEHALKHGF 109
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
+ N+ GG+HH +D G GFC + D+++ + V+I D D HQG+G + +
Sbjct: 110 SANLSGGYHHAYSDYGSGFCIFNDLAIAAAHLINTEQADTVLIFDCDVHQGDGTAQITQN 169
Query: 213 DSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELV 272
++ + +PR+ + + + + TT EYL L +AL+ +P+++
Sbjct: 170 HDQIITCSIHCEQNFPRNKQQSTY---DFALPAKTTDAEYLTTLKQALDFCVRIHNPDII 226
Query: 273 IYNAGTDILEGDPLGMLKV 291
+YNAG DI E D LG+L V
Sbjct: 227 LYNAGADIYEKDELGLLNV 245
>gi|410621570|ref|ZP_11332416.1| histone deacetylase family protein [Glaciecola pallidula DSM 14239
= ACAM 615]
gi|410158808|dbj|GAC27790.1| histone deacetylase family protein [Glaciecola pallidula DSM 14239
= ACAM 615]
Length = 298
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 129/263 (49%), Gaps = 28/263 (10%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
L++ P Y S L + H F K+ I L E + ++C EP+ + + ++
Sbjct: 4 LVFHPIY--SQLDLPIRHRFPIQKYQGIKDALLLEN-VSRDCFYEPIPLNINAISRIYDP 60
Query: 97 SYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTILAAKLAK 148
Y++ L S E+ P A+ R++ +P+ KQ+ GT+L + LA
Sbjct: 61 LYIEQLCSG-------ELDPKAM-------RRIGFPWSKQLIERTLTAAAGTVLTSSLAL 106
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEK 208
E G A+N+ GG+HH A+ G GFC D+ L NI +V++ D D HQG+G K
Sbjct: 107 EHGKALNLTGGYHHAFANFGSGFCMVNDLYLAALNMLQSKNIDKVLVFDCDVHQGDGTAK 166
Query: 209 DFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFD 268
++++ VY + + +P ++ D + GT +E+L +++A ++A F
Sbjct: 167 LAANNNAVYTVSIHGEKNFP---HRKQISDLDFGLAKGTGDDEFLATVEQAWQMAITYFQ 223
Query: 269 PELVIYNAGTDILEGDPLGMLKV 291
P+ VIY+AG D+ D LG L +
Sbjct: 224 PDAVIYDAGVDVHIDDDLGHLNI 246
>gi|254413119|ref|ZP_05026891.1| Histone deacetylase family, putative [Coleofasciculus
chthonoplastes PCC 7420]
gi|196180283|gb|EDX75275.1| Histone deacetylase family, putative [Coleofasciculus
chthonoplastes PCC 7420]
Length = 304
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 119/262 (45%), Gaps = 18/262 (6%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LP++Y PDY + H F SK+G++C+ L ++ + I P +E + +
Sbjct: 1 MNLPIVYHPDY---VTPLPPGHRFPMSKFGKLCELLLADTIVTSEQIHTPNPPPREWIQL 57
Query: 93 VHSESYLKSLQSS---PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
+H+ Y+++ + P I +P + LV R VGGTIL A+LA
Sbjct: 58 IHTPDYIQAYCNGTLDPKAQRRIGLP----WSPGLVTRTC-----TAVGGTILTAQLALT 108
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKD 209
G A N GG HH G GFC + D+++ + +++I+DLD HQG+G
Sbjct: 109 HGIACNTAGGTHHAFPSYGSGFCIFNDLAIATRVLQTMGLVQKILILDLDVHQGDGTAFI 168
Query: 210 FSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDP 269
F +D V+ M +P ++ D + + G + YL+ L L P
Sbjct: 169 FQNDPTVFTFSMHCQVNFP---ATKQKSDLDIPLPVGMDDDAYLQTLAHHLPDILSEVQP 225
Query: 270 ELVIYNAGTDILEGDPLGMLKV 291
+LV+Y+AG D D G L +
Sbjct: 226 DLVLYDAGVDTHACDRFGKLAL 247
>gi|428319276|ref|YP_007117158.1| Histone deacetylase [Oscillatoria nigro-viridis PCC 7112]
gi|428242956|gb|AFZ08742.1| Histone deacetylase [Oscillatoria nigro-viridis PCC 7112]
Length = 305
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 126/267 (47%), Gaps = 28/267 (10%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
KLP+IY DY + H F +K+ + Q L ++G DK+ P +E + +
Sbjct: 1 MKLPIIYHEDY---VAPLPPNHRFPMAKFRMLYQMLLADGVADKSQFHAPELPPQEWIEL 57
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQ--------VGGTILAA 144
VH Y+ Q+ N ++ + QR++ P+ + V GT+L A
Sbjct: 58 VHDHCYV---QAYCNGTL-----------DNKAQRRIGLPWSRALANRTCTAVAGTVLTA 103
Query: 145 KLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
KLA + G A N GG HH G GFC + D+++ + +V+I+DLD HQG+
Sbjct: 104 KLALDCGLACNTAGGTHHAFPAFGSGFCIFNDLAIASRVLQKSGLVRKVLIVDLDVHQGD 163
Query: 205 GHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAG 264
G F DS V+ M +P ++ D V + G +EYL+ LD+ L
Sbjct: 164 GTAVIFQDDSSVFTFSMHCEVNFP---GTKQKGDLDVPLPVGMEDDEYLQTLDKFLPDLL 220
Query: 265 HTFDPELVIYNAGTDILEGDPLGMLKV 291
+ P+LV+Y+AG D +GD LG L +
Sbjct: 221 SSVKPDLVLYDAGVDPHQGDKLGKLAL 247
>gi|311746918|ref|ZP_07720703.1| histone deacetylase family protein [Algoriphagus sp. PR1]
gi|126578609|gb|EAZ82773.1| histone deacetylase family protein [Algoriphagus sp. PR1]
Length = 300
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 110/240 (45%), Gaps = 13/240 (5%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ + + L EG + P + ++ H Y + L++ +S+
Sbjct: 18 HRFPMEKYQLLPEQLMYEGTATEANFFAPELVEERWIVNTHESEYWEKLRT---LSLSKS 74
Query: 114 VPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGF 171
FP + LV R+V + G+I AA A + G +N+ GG HH + G GF
Sbjct: 75 EIRKTGFPLSSELVSREV-----HIMAGSIQAAIYAIDYGIGMNIAGGTHHAFTNRGEGF 129
Query: 172 CAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDY 231
C D+++ +Y +V+IIDLD HQGNG + F V+ M YP
Sbjct: 130 CLLNDLAITANYLLENKLAKKVLIIDLDVHQGNGTAEIFQETPEVFTFSMHGKANYPMHK 189
Query: 232 EARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
E D VE+ G EYLK LDE L TF P+ ++Y +G DILE D LG L V
Sbjct: 190 EKS---DLDVELDDGMKDFEYLKLLDENLNQVLKTFTPDFILYQSGVDILETDKLGRLSV 246
>gi|241763690|ref|ZP_04761739.1| histone deacetylase superfamily [Acidovorax delafieldii 2AN]
gi|241367079|gb|EER61453.1| histone deacetylase superfamily [Acidovorax delafieldii 2AN]
Length = 311
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 122/262 (46%), Gaps = 40/262 (15%)
Query: 48 LGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPN 107
L + + H F +K+G + L+ + L + E AS +L + H SY++++ +
Sbjct: 11 LPLPQGHRFPMAKYGMLRDRLALD--LPGVALQEAPAASDGELALAHVPSYIQAVATG-- 66
Query: 108 VSIIIEVPPVALFPNCLVQRKVLYPF--------RKQVGGTILAAKLAKERGWAINVGGG 159
+ P A QR++ +P+ R+ VG TI A + A G A N+ GG
Sbjct: 67 -----TLAPAA-------QREIGFPWSPAMAERARRSVGATIAACRAALREGVAGNLAGG 114
Query: 160 FHHCSADEGGGFCAYADISLCIHYAFVQLNISR---------VMIIDLDAHQGNGHEKDF 210
HH AD G GFC + DI++ +Q +R V +IDLD HQGNG F
Sbjct: 115 THHAYADRGSGFCVFNDIAVAAR--LMQAERARAGVKAQPLCVAVIDLDVHQGNGTAHLF 172
Query: 211 SSDSRVYILDMFNPGIYP-RDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDP 269
D V+ L + +P R E D VE+ G +EYL L++AL+ F P
Sbjct: 173 QGDDSVFTLSLHGARNFPFRKEEG----DLDVELPDGCADDEYLHALEQALDALDQRFAP 228
Query: 270 ELVIYNAGTDILEGDPLGMLKV 291
LV+Y AG D GD LG L +
Sbjct: 229 GLVLYLAGADPHVGDRLGRLAL 250
>gi|91788947|ref|YP_549899.1| histone deacetylase superfamily protein [Polaromonas sp. JS666]
gi|91698172|gb|ABE45001.1| histone deacetylase superfamily [Polaromonas sp. JS666]
Length = 337
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 130/279 (46%), Gaps = 44/279 (15%)
Query: 36 PLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHS 95
P++ + D L + H F K+ + L SE L + + AS +L +VH+
Sbjct: 22 PMLQAFYADNFVLPLPPGHRFPMGKYKLLRDRLISE--LPHVQMAQAPAASDGELALVHT 79
Query: 96 ESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPF--------RKQVGGTILAAKLA 147
+Y++++ +PP A QR++ +P+ R+ G T+ AA++A
Sbjct: 80 PAYIEAITHG-------SLPPAA-------QREIGFPWSPGMAERARRSAGATVAAARVA 125
Query: 148 -----KERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISR---------- 192
+ +G A N+ GG HH A +G GFC + D ++ +Q R
Sbjct: 126 LGTGTRPQGVAANMAGGTHHAYAHKGSGFCVFNDSAVTAR--LMQAEWGRRHRPDRKPLQ 183
Query: 193 VMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEY 252
V +IDLD HQGNG F++D V+ L + +P EA D VE+ G T Y
Sbjct: 184 VAVIDLDVHQGNGTAHIFANDPSVFTLSLHGQKNFPFRKEAS---DLDVELPDGCTDAPY 240
Query: 253 LKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
L+ L+ AL+ FDP LV++ AG D EGD LG L +
Sbjct: 241 LQALEHALDELDRRFDPGLVVFLAGADPFEGDRLGRLAL 279
>gi|410910398|ref|XP_003968677.1| PREDICTED: uncharacterized protein SYNPCC7002_A1628-like [Takifugu
rubripes]
Length = 333
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 121/263 (46%), Gaps = 29/263 (11%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LP+I+ Y + H F K+ R+ FL + + +N + P AS + L VH
Sbjct: 32 LPIIHHSKY---VCDLPTNHRFPMGKFPRVLHFLFKDQVITENQVWVPEIASSDLLSCVH 88
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPF--------RKQVGGTILAAKL 146
+E YL + N I N QR+ +P+ R + GGT+LAA+L
Sbjct: 89 TEEYLNNFM---NGRI-----------NEQEQRRTGFPWSEGIVTRCRYETGGTLLAAEL 134
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
A +RG A + GG HH G GFC D+++ Y L +V+I+DLD HQG+G
Sbjct: 135 ALQRGLACSTAGGTHHAFPGFGSGFCLLNDLAVAAKYVSASLK-RKVLIVDLDVHQGDGT 193
Query: 207 EKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHT 266
F + RV+ + +P + D V V G +YL +++ L T
Sbjct: 194 AFIFKEEPRVFTFSVHCGKNFPLRKQQS---DLDVSVDDGLEDKDYLSTVEDHLPWLLDT 250
Query: 267 FDPELVIYNAGTDILEGDPLGML 289
F P+LV+Y+AG D D LG L
Sbjct: 251 FRPDLVLYDAGVDPHREDELGKL 273
>gi|319792622|ref|YP_004154262.1| histone deacetylase [Variovorax paradoxus EPS]
gi|315595085|gb|ADU36151.1| Histone deacetylase [Variovorax paradoxus EPS]
Length = 311
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 102/215 (47%), Gaps = 19/215 (8%)
Query: 84 EASKEDLLVVHSESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGT 140
AS +L + H+ ++ ++ SP I P + +V+R R+ G T
Sbjct: 48 RASDGELALAHTPQWIAAINDGSVSPQAMREIGFP----WSEAMVERS-----RRSTGAT 98
Query: 141 ILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNIS----RVMII 196
I A + A G A N+ GG HH AD+GGGFC + D ++ + + +V +I
Sbjct: 99 IAACRAAFAGGIAANMAGGTHHAYADKGGGFCVFNDAAVAARLMQAEHGRTGRLLKVAVI 158
Query: 197 DLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKL 256
DLD HQGNG F +D V+ L M +P EA D VE+ G +YL L
Sbjct: 159 DLDVHQGNGTASIFRNDPSVFTLSMHGQKNFPFRKEAS---DLDVELPDGCGDADYLTAL 215
Query: 257 DEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ AL+ F P LVIY AG D E D LG LK+
Sbjct: 216 EHALDELDRRFSPGLVIYLAGADPFERDRLGRLKL 250
>gi|300310969|ref|YP_003775061.1| deacetylase [Herbaspirillum seropedicae SmR1]
gi|300073754|gb|ADJ63153.1| deacetylase protein [Herbaspirillum seropedicae SmR1]
Length = 331
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 86/174 (49%), Gaps = 11/174 (6%)
Query: 126 QRKVLYPF--------RKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADI 177
QR++ +P+ R+ G TI A + A G A+N+ GG HH D G GFC + D
Sbjct: 88 QREIGFPWSPEMVERSRRSSGATIAACRAAFSEGVAVNLAGGTHHAYGDHGAGFCVFNDA 147
Query: 178 SLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFI 237
++ + +RV I+DLD HQGNG + D V+ L + YP + E
Sbjct: 148 AIAARLMQAERRAARVAIVDLDVHQGNGTAAILARDDSVFTLSLHGQNNYPFEKEQS--- 204
Query: 238 DQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
D V + G +YL L +AL F P+L+IY AG D EGD LG +K+
Sbjct: 205 DLDVALPDGVGDEDYLCALQQALATLQQRFAPQLLIYLAGADPHEGDRLGKMKL 258
>gi|406663291|ref|ZP_11071352.1| Acetoin utilization protein AcuC [Cecembia lonarensis LW9]
gi|405552606|gb|EKB47991.1| Acetoin utilization protein AcuC [Cecembia lonarensis LW9]
Length = 300
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 113/238 (47%), Gaps = 13/238 (5%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ + + L EG ++ + EP +E +L H Y + L+ N+S+
Sbjct: 18 HRFPMEKYNLLPEQLMYEGTVNSSNFFEPEALDREWILNTHHAEYFQKLE---NLSLSKS 74
Query: 114 VPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGF 171
FP LV+R++ + G++ AA A + G A+N+ GG HH +D G GF
Sbjct: 75 EIRRTGFPLSKALVEREI-----HIMHGSVQAALFALQYGVAMNIAGGTHHAFSDRGEGF 129
Query: 172 CAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDY 231
C DI++ +Y + +++++DLD HQGNG + F +S+V+ M YP
Sbjct: 130 CLLNDIAITANYLLEKKLAGQILVVDLDVHQGNGTAEIFRQESKVFTFSMHGAANYPMHK 189
Query: 232 EARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGML 289
E D + + G YL LD LE P+ +I+ +G D+L D LG L
Sbjct: 190 EKS---DLDIGLPDGIDDATYLDILDTNLEPLMDQVVPDFIIFQSGVDVLASDKLGRL 244
>gi|398873689|ref|ZP_10628942.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM74]
gi|398198844|gb|EJM85796.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM74]
Length = 325
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 129/276 (46%), Gaps = 22/276 (7%)
Query: 20 RILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCI 79
RIL S + + I LPLIY DY F H F K+ + L G +
Sbjct: 9 RILLS--FLNEIIMPLPLIYHEDYSPEF---PADHRFPMDKFRLLRDHLVDSGLTRDTDL 63
Query: 80 VEPLEASKEDLLVVHSESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQ 136
+ P E L + H SY++ S S + +P + L +R V +
Sbjct: 64 LRPDLCPAEILALAHDPSYIERYMSGELSREDQRRLGLP----WNEALARRTV-----RA 114
Query: 137 VGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMII 196
VGG++LAA+ A E G A ++ GG HH D GFC + D+++ HY ++RV+I
Sbjct: 115 VGGSLLAAEQALEHGLACHLAGGTHHAHYDYPAGFCIFNDLAVISHYLLESGRVNRVLIF 174
Query: 197 DLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP-RDYEARRFIDQKVEVVSGTTTNEYLKK 255
D D HQG+G + + + + +P R E+ D + + +G +YLK
Sbjct: 175 DCDVHQGDGTARILHNTPEAVTVSLHCEKNFPARKAES----DWDIPLPNGMGDADYLKV 230
Query: 256 LDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+D+AL + P+LV+Y+AG D+ + D LG LK+
Sbjct: 231 VDDALNYLLPLYQPDLVLYDAGVDVHKDDALGYLKL 266
>gi|374704111|ref|ZP_09710981.1| putative histone deacetylase family protein [Pseudomonas sp. S9]
Length = 305
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 121/263 (46%), Gaps = 20/263 (7%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
+LPL+Y PDY F H F K+ + L G + + P E L +
Sbjct: 1 MRLPLVYHPDYSPEF---PAEHRFPMEKFRLLHDHLIDSGVVSDEELHSPALCPNEILAL 57
Query: 93 VHSESYLKSLQSS--PNV-SIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
H Y++ S P+ + +P + L QR V + VGG+IL A+LA E
Sbjct: 58 AHCPDYIERYMSGELPHADQRRLGLP----WSAALAQRTV-----RAVGGSILTAELALE 108
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKD 209
G A ++ GG HH D GFC + D+++ Y + RV+I D D HQG+G +
Sbjct: 109 HGLACHLAGGTHHAHYDHPAGFCIFNDLAVISRYLLAAGKVQRVLIFDCDVHQGDGTARL 168
Query: 210 FSSDSRVYILDMFNPGIYPRDYEARRF-IDQKVEVVSGTTTNEYLKKLDEALEVAGHTFD 268
+ + + +P AR+ D + + G +YL+ +D+AL +
Sbjct: 169 LADTPEAITVSLHCEKNFP----ARKADSDWDIPLPMGMGDRDYLQVVDDALNYLLPLYQ 224
Query: 269 PELVIYNAGTDILEGDPLGMLKV 291
P+LV+Y+AG D+ + D LG LK+
Sbjct: 225 PDLVLYDAGVDVHKDDALGYLKL 247
>gi|406597491|ref|YP_006748621.1| histone deacetylase family protein [Alteromonas macleodii ATCC
27126]
gi|407684505|ref|YP_006799679.1| histone deacetylase family protein [Alteromonas macleodii str.
'English Channel 673']
gi|406374812|gb|AFS38067.1| histone deacetylase family protein [Alteromonas macleodii ATCC
27126]
gi|407246116|gb|AFT75302.1| histone deacetylase family protein [Alteromonas macleodii str.
'English Channel 673']
Length = 300
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 93/173 (53%), Gaps = 11/173 (6%)
Query: 127 RKVLYPFRKQ--------VGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADIS 178
R++ +P+ +Q V GT L AKLA E G A+N+ GG+HH AD G GFC + D+
Sbjct: 78 RRIGFPWSQQLIERTRTAVAGTCLTAKLALEHGKALNLTGGYHHAFADFGSGFCLFNDLY 137
Query: 179 LCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFID 238
L ++ V+I+DLD HQG+G K +D ++ L + +P ++ D
Sbjct: 138 LAAKTMQQTPSVENVLIVDLDVHQGDGTAKLAENDRDIFTLSIHGEKNFP---HRKQCSD 194
Query: 239 QKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ + GT +EYL L++AL + F P+ +IY+AG D+ D LG L +
Sbjct: 195 IDIGLDKGTEDDEYLTTLEQALTMVMRQFQPDAIIYDAGVDVHVNDDLGHLHI 247
>gi|149371070|ref|ZP_01890665.1| histone deacetylase superfamily protein [unidentified eubacterium
SCB49]
gi|149355856|gb|EDM44414.1| histone deacetylase superfamily protein [unidentified eubacterium
SCB49]
Length = 300
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 118/245 (48%), Gaps = 27/245 (11%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F +K+ + Q+L +G + EP + S+ +L VH+E Y + L + + I+
Sbjct: 18 HRFPMAKYELLPQYLLDQGICTLDNFFEPQKVSEASILKVHTEDYYRRL-----LKLEID 72
Query: 114 VPPVALFPNCLVQRKVLYPFRKQ--------VGGTILAAKLAKERGWAINVGGGFHHCSA 165
V RK+ +P RK + GTI + A E G ++N GG HH A
Sbjct: 73 KKEV---------RKMGFPLRKALVDRGHYIIDGTIKGCEYAIEYGVSMNSAGGTHHAYA 123
Query: 166 DEGGGFCAYADISLCIHYAFVQLNISR-VMIIDLDAHQGNGHEKDFSSDSRVYILDMFNP 224
D G FC D ++ + + L I++ V+I+DLD HQGNG K F +D RV+ M
Sbjct: 124 DHGEAFCLLNDQAVAARH-LLDLGIAKQVLIVDLDVHQGNGTAKIFENDDRVFTFSMHGA 182
Query: 225 GIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGD 284
YP ++ R D + + GT EYL+ L L +P+ + Y +G DIL+ D
Sbjct: 183 KNYP--FKKDR-SDLDIGLDDGTEDAEYLEVLYNTLPKLIKKVNPDFIFYLSGVDILKTD 239
Query: 285 PLGML 289
LG L
Sbjct: 240 KLGRL 244
>gi|392967178|ref|ZP_10332596.1| Histone deacetylase [Fibrisoma limi BUZ 3]
gi|387843975|emb|CCH54644.1| Histone deacetylase [Fibrisoma limi BUZ 3]
Length = 300
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 107/241 (44%), Gaps = 15/241 (6%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQS---SPNVSI 110
H F K+ I + L EG P +L VH+ +Y++ LQ+ P +
Sbjct: 18 HRFPMVKYELIHEQLLYEGTCTDANFFHPQPVDDRWVLGVHTATYVQQLQTLTVDPKMVR 77
Query: 111 IIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGG 170
I P A L++R+ + GTI A+ G A+NV GG HH D+G G
Sbjct: 78 RIGFPLSA----GLIEREWVI-----TQGTIDCTHKARRDGVAMNVAGGTHHAFPDKGEG 128
Query: 171 FCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRD 230
FC D+ + HY + +++IIDLD HQGNG F + RV+ M YP
Sbjct: 129 FCLLNDVGVAAHYLLETQQVRQILIIDLDVHQGNGTAVMFQHEPRVFTFSMHGKDNYPLH 188
Query: 231 YEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLK 290
E D VE+ +G EYL L + L P+ + Y +G DIL D LG L
Sbjct: 189 KEQS---DLDVELPTGMEDEEYLNVLYDTLPKLIRQVQPDFLFYVSGVDILASDRLGKLN 245
Query: 291 V 291
V
Sbjct: 246 V 246
>gi|194289418|ref|YP_002005325.1| histone deacetylase [Cupriavidus taiwanensis LMG 19424]
gi|193223253|emb|CAQ69258.1| Histone deacetylase [Cupriavidus taiwanensis LMG 19424]
Length = 314
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 104/216 (48%), Gaps = 15/216 (6%)
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQSSP-NVSIIIEVPPVALFP--NCLVQRKVLYPFRK 135
+ E A + LL+ H+ Y+++ + + + E+ FP +V+R R+
Sbjct: 40 LSEAPRAGDDALLLAHTAEYVEAASAGTLDAARQREIG----FPWSEAMVERS-----RR 90
Query: 136 QVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMI 195
G TI A + A G A+N+ GG HH AD+GGGFC + D ++ + RV +
Sbjct: 91 SAGATIEACRSALREGIAVNLAGGTHHAYADKGGGFCVFNDAAIAARVLQRDGAVRRVAV 150
Query: 196 IDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKK 255
IDLD HQGNG D V+ L + YP EA D V + G Y +
Sbjct: 151 IDLDVHQGNGTASILHGDPSVFTLSLHGEKNYPFRKEAS---DLDVGLPDGCDDETYAQA 207
Query: 256 LDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
L AL+ F+P+L+IY AG D EGD LG LK+
Sbjct: 208 LQAALDTLFSRFEPDLLIYLAGADPHEGDRLGRLKL 243
>gi|90411556|ref|ZP_01219566.1| Histone deacetylase/AcuC/AphA family protein [Photobacterium
profundum 3TCK]
gi|90327446|gb|EAS43799.1| Histone deacetylase/AcuC/AphA family protein [Photobacterium
profundum 3TCK]
Length = 304
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 127/269 (47%), Gaps = 32/269 (11%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIV---EPLEASKEDLL 91
LPL+Y P Y S L + H + SK+ R+ Q+L+ +DK V +P + +++
Sbjct: 2 LPLVYHPIY--SQLDLPPAHRYPISKYRRLYQYLNDSLPIDKQTSVKFHQPNTLTSDNIK 59
Query: 92 VVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTILA 143
+H+ Y+ +L I P A R++ +P+ +Q+ GT L
Sbjct: 60 RLHNSDYVDAL--------INNTLPAAKM------RRIGFPWSQQLIDRTLMSTAGTQLT 105
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQG 203
+LA + G AI++ GG+HH D G GFC + D++L H+A + +VMI+D D H G
Sbjct: 106 VELAHQHGIAIHLSGGYHHAHHDFGSGFCLFNDLALAAHHALTLNGVDKVMIVDCDVHHG 165
Query: 204 NGHEKDFSSDSRVYILDMFNPGIYPRDYEARR-FIDQKVEVVSGTTTNEYLKKLDEALEV 262
+G + + + +P AR+ D + + T++ +YL +
Sbjct: 166 DGTATLLAKHDDIITFSVHCDKNFP----ARKPDSDIDLALPKNTSSKDYLDTFKAIYTL 221
Query: 263 AGHTFDPELVIYNAGTDILEGDPLGMLKV 291
A P+LV+Y+AG DI + D LG V
Sbjct: 222 ALAQHQPDLVLYDAGVDIHKDDELGYFAV 250
>gi|395647111|ref|ZP_10434961.1| putative histone deacetylase family protein [Pseudomonas
extremaustralis 14-3 substr. 14-3b]
Length = 306
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 121/263 (46%), Gaps = 20/263 (7%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LPLIY DY F H F K+ + L S G + ++ P E L +
Sbjct: 1 MPLPLIYHDDYSPEF---PADHRFPMDKFRLLRDHLVSSGLTQDSHLLRPALCPPEILAL 57
Query: 93 VHSESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
H Y++ S S + +P + L +R V + VGG++LAA+ A E
Sbjct: 58 AHEPGYIERYMSGELSREDQRRLGLP----WSEALARRTV-----RAVGGSLLAAEQALE 108
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKD 209
G A ++ GG HH D GFC + D+++ HY ++RV+I D D HQG+G +
Sbjct: 109 HGLACHLAGGTHHAHYDYPAGFCIFNDLAVISHYLLASGRVNRVLIFDCDVHQGDGTARI 168
Query: 210 FSSDSRVYILDMFNPGIYPRDYEARRF-IDQKVEVVSGTTTNEYLKKLDEALEVAGHTFD 268
+ + +P AR+ D + + G +YLK +D+AL +
Sbjct: 169 LHDTPDAITVSLHCEKNFP----ARKAQSDWDIPLPMGMADADYLKVVDDALNYLLPLYQ 224
Query: 269 PELVIYNAGTDILEGDPLGMLKV 291
P+LV+Y+AG D+ + D LG LK+
Sbjct: 225 PDLVLYDAGVDVHKDDALGYLKL 247
>gi|332140462|ref|YP_004426200.1| histone deacetylase family protein [Alteromonas macleodii str.
'Deep ecotype']
gi|327550484|gb|AEA97202.1| histone deacetylase family protein [Alteromonas macleodii str.
'Deep ecotype']
Length = 224
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 94/173 (54%), Gaps = 11/173 (6%)
Query: 127 RKVLYPFRKQ--------VGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADIS 178
R++ +P+ +Q V GT L A LA + G A+N+ GG+HH AD G GFC + D+
Sbjct: 2 RRIGFPWSQQLIERTRTAVAGTCLTASLALQHGKALNLTGGYHHAFADFGSGFCLFNDLY 61
Query: 179 LCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFID 238
L I V+I+DLD HQG+G K +D ++ L + +P Y ++ D
Sbjct: 62 LAAKTMQKSSAIDNVLIVDLDVHQGDGTAKLAENDRDIFTLSIHGEKNFP--YRKQQS-D 118
Query: 239 QKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ + GT +EYL+ L++AL +A F P+ +IY+AG D+ D LG L +
Sbjct: 119 IDIGLAKGTEDDEYLQTLEQALALAKRQFQPDAIIYDAGVDVHVNDDLGHLHI 171
>gi|153000143|ref|YP_001365824.1| histone deacetylase superfamily protein [Shewanella baltica OS185]
gi|160874765|ref|YP_001554081.1| histone deacetylase superfamily protein [Shewanella baltica OS195]
gi|378708018|ref|YP_005272912.1| histone deacetylase superfamily protein [Shewanella baltica OS678]
gi|151364761|gb|ABS07761.1| histone deacetylase superfamily [Shewanella baltica OS185]
gi|160860287|gb|ABX48821.1| histone deacetylase superfamily [Shewanella baltica OS195]
gi|315267007|gb|ADT93860.1| histone deacetylase superfamily [Shewanella baltica OS678]
Length = 302
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 119/263 (45%), Gaps = 23/263 (8%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+PL+Y Y S L + H F ++K+ + Q+L P + +D++ VH
Sbjct: 4 IPLVYHASY--SKLALPPHHRFPTTKYANLRQYLLENQLATPAQFHTPTAMTAQDVMQVH 61
Query: 95 SESYLKSLQSSPNVSIIIEVPPVAL----FP--NCLVQRKVLYPFRKQVGGTILAAKLAK 148
Y++ I +P AL FP LV+R + V GT L A LA
Sbjct: 62 QREYVEQF-------IAGTLPTAALRRIGFPWSEALVERTL-----HSVAGTTLTASLAI 109
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEK 208
+G +++ GG+HH D G G+C + D+ L A + +V+I D D HQG+G
Sbjct: 110 NQGIGLHLTGGYHHAHYDFGSGYCIFNDLILAAQNAIASQQVHKVLIFDCDVHQGDGSAT 169
Query: 209 DFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFD 268
+ + +P ++ +E+ G+ N YL+ +++ L +
Sbjct: 170 LSQRHQGIISCSIHCKENFP---SRKQHSHHDIELTKGSDDNLYLETVEQTLALLIRIHQ 226
Query: 269 PELVIYNAGTDILEGDPLGMLKV 291
P+L++Y+AG DI + D LG+L +
Sbjct: 227 PDLILYDAGVDIHQNDDLGLLNI 249
>gi|407939445|ref|YP_006855086.1| histone deacetylase [Acidovorax sp. KKS102]
gi|407897239|gb|AFU46448.1| histone deacetylase [Acidovorax sp. KKS102]
Length = 310
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/227 (35%), Positives = 107/227 (47%), Gaps = 31/227 (13%)
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPF----- 133
+ E L AS E L VHS Y+ ++ + P A QR++ +P+
Sbjct: 40 LKEALPASDEALARVHSPQYINAVDHG-------TLAPAA-------QREIGFPWSPAMA 85
Query: 134 ---RKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFV-QLN 189
R+ VG T+ A + A G A N+ GG HH AD+G GFC + D+++ A LN
Sbjct: 86 ERARRSVGATLAATRAAWREGVAGNLAGGTHHSYADKGSGFCVFNDVAVAARQAQADHLN 145
Query: 190 IS-----RVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVV 244
+V +IDLD HQGNG F D V+ L + +P E D VE+
Sbjct: 146 DGSGWPLQVAVIDLDVHQGNGTAHIFQGDDSVFTLSLHGARNFPFRKEPS---DLDVELP 202
Query: 245 SGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
G +EYL LD+ALE H P+LV Y AG D GD LG L V
Sbjct: 203 DGCADDEYLHALDQALETLDHRCKPDLVFYLAGADPHVGDRLGRLAV 249
>gi|404493709|ref|YP_006717815.1| histone deacetylase family protein [Pelobacter carbinolicus DSM
2380]
gi|77545744|gb|ABA89306.1| histone deacetylase family protein [Pelobacter carbinolicus DSM
2380]
Length = 299
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 119/265 (44%), Gaps = 24/265 (9%)
Query: 27 YFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEAS 86
YFD F LP EK H F +SK+ + Q + + + + P S
Sbjct: 5 YFDQHTFFLP--------------EK-HRFPASKYSMLRQRVLTANVVPPENMRTPEPVS 49
Query: 87 KEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKL 146
DL H+ YL + I + + P LVQR + G T+ +
Sbjct: 50 DADLHRAHTGDYLHRFEHGLLTKAEIRLIGLPWSPE-LVQR-----VKYTAGATVAVCRH 103
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
A + G +++GGG HH +D G G+C Y D+ + + ++ RV++ID D HQGNG
Sbjct: 104 ALDDGVGLSLGGGTHHACSDHGQGYCLYNDVVVAARALQAEGSVRRVLVIDCDVHQGNGT 163
Query: 207 EKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHT 266
+ + DS ++ + +P + D V + GT YL+ LDEAL++A
Sbjct: 164 AETTTGDSSIFTFSIHGEKNFP---YCKIPGDLDVGLPDGTGDEAYLRALDEALDIALSR 220
Query: 267 FDPELVIYNAGTDILEGDPLGMLKV 291
P+L IY AG D+ E D LG L +
Sbjct: 221 SRPDLAIYLAGVDVHENDRLGRLAL 245
>gi|434387387|ref|YP_007097998.1| deacetylase, histone deacetylase/acetoin utilization protein
[Chamaesiphon minutus PCC 6605]
gi|428018377|gb|AFY94471.1| deacetylase, histone deacetylase/acetoin utilization protein
[Chamaesiphon minutus PCC 6605]
Length = 305
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 124/263 (47%), Gaps = 20/263 (7%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
+P++Y PDY + + H F SK+ + + L ++G + P E L +
Sbjct: 1 MSVPIVYHPDYVVP---LPDSHRFPMSKFRILYELLLADGLVTTEQTFAPTLPPTEWLEL 57
Query: 93 VHSESYLKSLQSS---PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
VH +Y+++ + P I +P + LV R + +GG+IL AKLA E
Sbjct: 58 VHDPAYIQAYYTGTLDPKAQRRIGLP----WSPELVNRTCI-----ALGGSILTAKLAIE 108
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNIS-RVMIIDLDAHQGNGHEK 208
G A N GG HH A+ G GFC + D+++ +L ++ +++I+DLD HQG+G
Sbjct: 109 HGIACNTAGGTHHAFANMGSGFCIFNDLAIASR-VIQKLGLAKKILIVDLDVHQGDGTAA 167
Query: 209 DFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFD 268
F D V+ M +P ++ D V + G EYLK L + L
Sbjct: 168 IFQRDPSVFTFSMHCDVNFP---SKKQTSDLDVPLREGMEDAEYLKTLSQYLPDLLSQVK 224
Query: 269 PELVIYNAGTDILEGDPLGMLKV 291
P+LV+Y+AG D D LG L +
Sbjct: 225 PDLVLYDAGVDPHISDRLGKLAL 247
>gi|320104431|ref|YP_004180022.1| histone deacetylase [Isosphaera pallida ATCC 43644]
gi|319751713|gb|ADV63473.1| Histone deacetylase [Isosphaera pallida ATCC 43644]
Length = 309
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 116/251 (46%), Gaps = 15/251 (5%)
Query: 44 DISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQ 103
D L + + H F K+ + Q + + D+ ++EP AS DL VH Y++ +
Sbjct: 14 DRYTLPLPEWHRFPMRKYALLRQQVERAAWSDRVRLLEPPAASDADLERVHDPGYVRRVA 73
Query: 104 SS---PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGF 160
+ P I +P + LV+R R+ GGTI AA+ A E ++N+ GG
Sbjct: 74 TGGLRPEEEREIGLP----WSEGLVERS-----RRSTGGTIAAARAALEDFASVNLAGGT 124
Query: 161 HHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILD 220
HH +G G+C + D ++ + + RV+I+D D H G+G F+ D RV+
Sbjct: 125 HHAHVHKGAGYCVFNDAAVAARALLAEGRVERVVILDCDVHHGDGTAAIFADDPRVFTYS 184
Query: 221 MFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDI 280
+ + YP D V + G +YL +L+E + A L IY AG D
Sbjct: 185 IHSAKNYPMRKPPS---DLDVPLPDGIGDTDYLARLEETVPQALDRAGANLAIYLAGADP 241
Query: 281 LEGDPLGMLKV 291
EGD LG LK+
Sbjct: 242 YEGDRLGRLKL 252
>gi|372222676|ref|ZP_09501097.1| histone deacetylase [Mesoflavibacter zeaxanthinifaciens S86]
Length = 300
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 111/244 (45%), Gaps = 25/244 (10%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ + Q L EG + + EP+ A + +L VH+ Y L + ++
Sbjct: 18 HRFPMEKYELLPQQLLHEGTCEASNFFEPIYAEIQPILAVHTTDYYSRL-----TKLNLD 72
Query: 114 VPPVALFPNCLVQRKVLYPFRKQV--------GGTILAAKLAKERGWAINVGGGFHHCSA 165
+ RK+ +P KQ+ GT+ A + A + G A+N+ GG HH +
Sbjct: 73 KKEI---------RKIGFPLSKQLVDREHIITDGTLKAIQFALKYGIAMNIAGGTHHAYS 123
Query: 166 DEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
+ G FC D ++ Y Q S+++I+DLD HQGNG + F + V+ +
Sbjct: 124 NRGEAFCLLNDQAIGAQYLLDQNLASKILIVDLDVHQGNGTAEIFEHNPHVFTFSIHGKA 183
Query: 226 IYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDP 285
YP E D + + GTT + YLK L+E L P+ V Y AG D+L D
Sbjct: 184 NYPFKKEIS---DLDIALEKGTTDDVYLKILNETLSNLLEQTQPDFVFYLAGVDVLATDK 240
Query: 286 LGML 289
LG L
Sbjct: 241 LGTL 244
>gi|384250439|gb|EIE23918.1| Arginase/deacetylase, partial [Coccomyxa subellipsoidea C-169]
Length = 304
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 116/252 (46%), Gaps = 25/252 (9%)
Query: 50 IEKLHPFDSSKWGRICQFLSSEG---FLDKNCIVEPLEASKEDLLVVHSESYLKSL---Q 103
+E+ H F SK+ R+ + L+ EG D I E +A++EDL + H Y++ Q
Sbjct: 18 LEEKHRFPMSKY-RLTR-LALEGDATVKDLLEIREAPQATEEDLALAHDPGYVRRFFEGQ 75
Query: 104 SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAI----NVGGG 159
P I P + LV+R R GGT+ A + E W + N+ GG
Sbjct: 76 LGPKEMRSIGFP----WSEGLVRRA-----RASAGGTLAATRALLE--WQLPFTANIAGG 124
Query: 160 FHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYIL 219
HH A G GFC + DI++ A + I +V++IDLD HQGNG F+ D RV
Sbjct: 125 THHAFAGRGEGFCVFNDIAVSARMAMTEEGIEKVLVIDLDVHQGNGTSAIFAQDDRVTTF 184
Query: 220 DMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTD 279
D+ YP ++ D V + T EYL L E L P+LV + AG D
Sbjct: 185 DVHGDKNYPWKTRSKSTYD--VALKDATRDEEYLALLREWLPRLFAEHRPQLVFFQAGVD 242
Query: 280 ILEGDPLGMLKV 291
+E D G L +
Sbjct: 243 AMEKDSFGRLSL 254
>gi|167648847|ref|YP_001686510.1| histone deacetylase superfamily protein [Caulobacter sp. K31]
gi|167351277|gb|ABZ74012.1| histone deacetylase superfamily [Caulobacter sp. K31]
Length = 305
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 121/261 (46%), Gaps = 22/261 (8%)
Query: 36 PLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHS 95
P+++ P + + H F K+ R+ L +EG V P ++ L +VH
Sbjct: 7 PIVHHPAFRAE---MPVGHRFPMDKFSRLAAVLEAEGVAGPAGFVRPEPIDEDSLRLVHD 63
Query: 96 ESYLKSLQSSPNVSIIIEVPPVAL----FPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
E+Y++ + I + +PP + PN V R GGT+ AA+LA E G
Sbjct: 64 EAYVRGV-------IDLTLPPEFVRRIGMPNT---DSVAARARAATGGTLAAARLALEHG 113
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A N GG HH AD G GFC + D+++ + + +V+++DLD HQG+G + F
Sbjct: 114 VACNTAGGSHHAQADTGAGFCVFNDVAVAARRLLAEGKVGQVLVVDLDVHQGDGTARIFE 173
Query: 212 SDSRVYILDMFNPGIYPRDYEARRFI-DQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPE 270
D+ V+ M +P AR+ D V + GT YL KL E L P+
Sbjct: 174 GDASVFTFSMHAEKNFP----ARKATSDLDVNLPDGTGDEAYLGKLGELLPELLARVAPD 229
Query: 271 LVIYNAGTDILEGDPLGMLKV 291
LV +NAG D D LG L +
Sbjct: 230 LVFFNAGVDPHADDKLGRLSL 250
>gi|376316853|emb|CCG00233.1| histone deacetylase superfamily protein [uncultured Dokdonia sp.]
Length = 300
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 107/244 (43%), Gaps = 25/244 (10%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ + + L EG D N EP + + E +L H+ Y++SL++ +
Sbjct: 18 HRFPMEKYDLLPKQLVYEGTCDANNFFEPTQVAHEHILRCHTTEYVESLKA-------LT 70
Query: 114 VPPVALFPNCLVQRKVLYPFRKQV--------GGTILAAKLAKERGWAINVGGGFHHCSA 165
+ P A QRK +P +++ GTI A E G A+N+ GG HH
Sbjct: 71 IDPRA-------QRKTGFPLSQELVDRELIITQGTIDGCHYALENGIAMNIAGGTHHAYT 123
Query: 166 DEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
D G FC D ++ Y +++I+DLD HQGNG + F+ D V+ M
Sbjct: 124 DHGEAFCLLNDQAIAARYLQANELAKKILIVDLDVHQGNGTAEIFTGDDSVFTFSMHGKA 183
Query: 226 IYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDP 285
YP E D + + + T +YL L + L P+ + Y G DIL D
Sbjct: 184 NYPFRKEIS---DLDIALETDTGDADYLTILKKTLPTLIKEQQPDFIFYLCGVDILASDK 240
Query: 286 LGML 289
LG L
Sbjct: 241 LGKL 244
>gi|226228541|ref|YP_002762647.1| histone deacetylase family protein [Gemmatimonas aurantiaca T-27]
gi|226091732|dbj|BAH40177.1| histone deacetylase family protein [Gemmatimonas aurantiaca T-27]
Length = 311
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 116/248 (46%), Gaps = 25/248 (10%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ + + + +EG + + + +P A +EDL VH+ Y+ ++
Sbjct: 18 HRFPMDKYRLLREAVLAEGLVAPDRVHDPQRALEEDLRRVHTVDYVAQIRDG-------- 69
Query: 114 VPPVALFPNCLVQRKVLYPFR--------KQVGGTILAAKLAKERGWAINVGGGFHHCSA 165
P A QR++ P+ + V GTI A+ A G A+N+ GG HH
Sbjct: 70 TLPAA------EQRRIGLPWSPSFVERAFRVVQGTIEASACALREGLAMNLAGGTHHAFP 123
Query: 166 DEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
D G GFC + D+++ + + + RV I+DLD HQGNG F+ D +V+ M
Sbjct: 124 DRGEGFCTFNDVAVAVRRLQAEGAVQRVAIVDLDVHQGNGTHGCFAGDEQVFTFSMHGAK 183
Query: 226 IYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDP 285
+P ++ +D VE+ GT YL L L P+LV+Y AG D EGD
Sbjct: 184 NFPF-HKVPGTLD--VELEDGTGDEAYLALLQTHLPRVLRISRPDLVVYLAGADPHEGDR 240
Query: 286 LGMLKVKW 293
LG L + +
Sbjct: 241 LGRLALTF 248
>gi|254471722|ref|ZP_05085123.1| histone deacetylase family protein [Pseudovibrio sp. JE062]
gi|211958924|gb|EEA94123.1| histone deacetylase family protein [Pseudovibrio sp. JE062]
Length = 279
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 107/219 (48%), Gaps = 25/219 (11%)
Query: 81 EPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYP------FR 134
EP S++DLL VH+ Y+ + S VP + R++ +P FR
Sbjct: 25 EPAPISRDDLLRVHAREYVDQVLSC-------SVPHA-------IAREIGFPMTESVSFR 70
Query: 135 KQ--VGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISR 192
Q GG++L A LA E G A N GG HH +G GFC + D+++ + + R
Sbjct: 71 AQCATGGSLLTAMLALEHGVACNTAGGSHHARIAQGAGFCVFNDVAVAVRAVQAMRMVRR 130
Query: 193 VMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEY 252
V+IIDLD HQG+G F+ D+ V+ L + + YP +A V + G +EY
Sbjct: 131 VLIIDLDVHQGDGTADIFAHDTSVFTLSLHSEKNYPVRKKASTL---DVPLEDGMEDDEY 187
Query: 253 LKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
L L++ L+ TF +LV +NAG D D LG L +
Sbjct: 188 LSILEDTLKRVLTTFKADLVFFNAGVDPHHDDRLGRLAL 226
>gi|113970809|ref|YP_734602.1| histone deacetylase superfamily protein [Shewanella sp. MR-4]
gi|113885493|gb|ABI39545.1| histone deacetylase superfamily [Shewanella sp. MR-4]
Length = 300
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 122/260 (46%), Gaps = 17/260 (6%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+PL+Y Y S L + H F ++K+ R+ Q+L P + ED++ VH
Sbjct: 2 IPLVYHASY--SKLALPSHHRFPTTKYARLYQYLLDNQLAVPAQFHTPSPMTAEDVMQVH 59
Query: 95 SESYLKS-LQSSPNVSIIIEVPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
+ Y++ +Q S + + + FP LV+R + V GT L A LA + G
Sbjct: 60 QQDYVEQFIQGSLASTALRRIG----FPWSEALVERTL-----HSVSGTSLTAHLALQTG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A+++ GG+HH D G G+C + D+ + + + +V+I D D HQG+G
Sbjct: 111 IALHLTGGYHHAHYDFGSGYCIFNDLIIAARKLMAEQQLHKVLIFDCDVHQGDGTATLSH 170
Query: 212 SDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPEL 271
+ + +P + + +E+ G N Y + +++ LE+ P+L
Sbjct: 171 RHQGIISCSIHCKENFPSRKQQSHY---DIELTKGADDNAYQETVEQTLELLIRLHQPDL 227
Query: 272 VIYNAGTDILEGDPLGMLKV 291
++Y+AG DI + D LG LK+
Sbjct: 228 ILYDAGVDIHQDDDLGHLKI 247
>gi|390953897|ref|YP_006417655.1| deacetylase [Aequorivita sublithincola DSM 14238]
gi|390419883|gb|AFL80640.1| deacetylase, histone deacetylase/acetoin utilization protein
[Aequorivita sublithincola DSM 14238]
Length = 300
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/238 (31%), Positives = 111/238 (46%), Gaps = 13/238 (5%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ + + L EG E S+ED+L VH++ Y +SL N++I
Sbjct: 18 HRFPMEKYELLPKQLLHEGTCVAENFFESKMPSEEDILAVHTKEYFESL---VNLTIDSR 74
Query: 114 VPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGF 171
FP L+ R++ + GTI ++ A + G A N+ GG HH + G GF
Sbjct: 75 AARKIGFPLSEALIDREL-----RIAQGTIEGSEHALKYGVAFNIAGGTHHAYTNRGEGF 129
Query: 172 CAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDY 231
C D ++ Y ++++I+DLD HQGNG + F +D V+ M G YP +
Sbjct: 130 CMLNDQAIASKYLQNNGLANKILIVDLDVHQGNGTAEIFLNDDSVFTFSMHGAGNYPFNK 189
Query: 232 EARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGML 289
E D + + G+ YL+KL E L P + Y AG DILE D LG L
Sbjct: 190 EKS---DLDIAIPDGSGDEVYLQKLKETLPKLVEEQKPGFIFYLAGVDILETDKLGRL 244
>gi|124266700|ref|YP_001020704.1| hypothetical protein Mpe_A1507 [Methylibium petroleiphilum PM1]
gi|124259475|gb|ABM94469.1| conserved hypothetical protein [Methylibium petroleiphilum PM1]
Length = 324
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/249 (33%), Positives = 122/249 (48%), Gaps = 25/249 (10%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS-LQSSPNVSIII 112
H F +K+ + L++E L +VE AS +L + H +++ + L + + +
Sbjct: 17 HRFPMAKYRMLRDRLAAE--LPALRLVEAPAASDGELALAHEPAWVNAVLDGTLSATQQR 74
Query: 113 EVPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGG 170
E+ FP +V+R R+ VG TI AA+ A + G A N+ GG HH SAD+G G
Sbjct: 75 EIG----FPWSEAMVERS-----RRSVGATIAAARRALDEGVAANLAGGTHHASADKGSG 125
Query: 171 FCAYADISLCIH-----YAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
+C + DI++ + + + RV +IDLD HQGNG F D V+ L +
Sbjct: 126 YCVFNDIAVAARLMQAEWHRARRTLLRVAVIDLDVHQGNGTAAIFRDDPTVFTLSLHGEK 185
Query: 226 IYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEV--AGHT-FDPELVIYNAGTDILE 282
+P EA D VE+ G YL LD AL A H+ P LV Y AG D E
Sbjct: 186 NFPFRKEAS---DLDVELPDGCRDAAYLAALDGALATLWARHSDAPPGLVFYLAGADPHE 242
Query: 283 GDPLGMLKV 291
GD LG L++
Sbjct: 243 GDRLGRLRL 251
>gi|398910038|ref|ZP_10654851.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM49]
gi|398186870|gb|EJM74230.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM49]
Length = 325
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 124/264 (46%), Gaps = 20/264 (7%)
Query: 32 IFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLL 91
I LPLIY DY F H F K+ + L + G ++ P + L
Sbjct: 19 IMPLPLIYHEDYSPEF---PADHRFPMDKFRLLRDHLVNSGLTRDADLLRPELCPADILA 75
Query: 92 VVHSESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAK 148
+ H SY++ S S + +P + L +R V + VGG++LAA+ A
Sbjct: 76 LAHDPSYIERYMSGELSREDQRRLGLP----WNEALARRTV-----RAVGGSLLAAEQAL 126
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEK 208
E G A ++ GG HH D GFC + D+++ HY ++RV+I D D HQG+G +
Sbjct: 127 EHGLACHLAGGTHHAHYDYPAGFCIFNDLAVISHYLLESGRVNRVLIFDCDVHQGDGTAR 186
Query: 209 DFSSDSRVYILDMFNPGIYP-RDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTF 267
+ + + +P R E+ D + + +G +YLK +D+AL +
Sbjct: 187 ILHNTPEAVTVSLHCEKNFPARKAES----DWDIPLPNGMGDADYLKVVDDALNYLLPLY 242
Query: 268 DPELVIYNAGTDILEGDPLGMLKV 291
P+LV+Y+AG D+ + D LG LK+
Sbjct: 243 QPDLVLYDAGVDVHKDDALGYLKL 266
>gi|327405255|ref|YP_004346093.1| Histone deacetylase [Fluviicola taffensis DSM 16823]
gi|327320763|gb|AEA45255.1| Histone deacetylase [Fluviicola taffensis DSM 16823]
Length = 302
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 115/253 (45%), Gaps = 12/253 (4%)
Query: 39 YSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESY 98
Y P Y + H F K+G I + L EG L++ +EP + VH++ Y
Sbjct: 7 YHPSY---IHAVPSTHRFPMEKYGLIYEQLLYEGILEEAHFLEPNLLDLKIASKVHTKEY 63
Query: 99 LKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGG 158
L L N++ V+ F + Q+ + FR + GT L A+ + G A+N+ G
Sbjct: 64 LTKL---VNLNCTSREQRVSGFVHN--QQLIEREFRI-MEGTRLCAERVENGGIALNIAG 117
Query: 159 GFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYI 218
G HH + G GFC D ++ + + R++I+DLD HQGNG + F ++ V+
Sbjct: 118 GTHHAYTNRGEGFCLLNDQAIAAQWLLDEQLFKRILIVDLDVHQGNGTAEIFKNNPNVFT 177
Query: 219 LDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGT 278
M YP E D+ + + + +YL L L +F P+ + Y G
Sbjct: 178 FSMHGKANYPMHKEES---DRDIHLETNLKDKDYLNILKSELTAILDSFSPDFIFYQCGV 234
Query: 279 DILEGDPLGMLKV 291
DILE D LG L V
Sbjct: 235 DILETDKLGKLSV 247
>gi|418023646|ref|ZP_12662631.1| histone deacetylase superfamily [Shewanella baltica OS625]
gi|353537529|gb|EHC07086.1| histone deacetylase superfamily [Shewanella baltica OS625]
Length = 302
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 119/263 (45%), Gaps = 23/263 (8%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+PLIY Y S L + H F ++K+ + Q+L P + +D++ VH
Sbjct: 4 IPLIYHASY--SKLALPPHHRFPTTKYANLRQYLLENLLATPAQFHTPTAMTVQDVMQVH 61
Query: 95 SESYLKSLQSSPNVSIIIEVPPVAL----FP--NCLVQRKVLYPFRKQVGGTILAAKLAK 148
Y++ I +P AL FP LV+R + V GT L A LA
Sbjct: 62 QREYVEQF-------IAGTLPTAALRRIGFPWSEALVERTL-----HSVAGTTLTASLAI 109
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEK 208
+G +++ GG+HH D G G+C + D+ L A + +V+I D D HQG+G
Sbjct: 110 NQGIGLHLTGGYHHAHYDFGSGYCIFNDLILAAQNAIASQQVHKVLIFDCDVHQGDGSAT 169
Query: 209 DFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFD 268
+ + +P ++ +E+ G+ N YL+ +++ L +
Sbjct: 170 LSQRHQGIISCSIHCKENFP---SRKQHSHHDIELTKGSDDNLYLETVEQTLALLIRIHQ 226
Query: 269 PELVIYNAGTDILEGDPLGMLKV 291
P+L++Y+AG DI + D LG+L +
Sbjct: 227 PDLILYDAGVDIHQNDDLGLLNI 249
>gi|145354637|ref|XP_001421586.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581824|gb|ABO99879.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 323
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 127/264 (48%), Gaps = 22/264 (8%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDK---NCIVEPLEASKEDLL 91
+P+++ Y + + H F + + R+ L EG + + NC V S ++L
Sbjct: 17 VPVVHHASYSKPVM--PRGHRFPMTVFQRVHDILREEGVIARGQTNCFVPGRAPSVDELC 74
Query: 92 VVHSESYLKSLQSSP---NVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAK 148
H E Y++ +++S I +P + + LV+R ++ +V GT+L LA
Sbjct: 75 RAHDEDYVRDVRASALDAKREREIGLP----WSDALVERTLM-----EVSGTMLTVDLAM 125
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEK 208
+ G +N GG HH D G GFC D+++ A +SRVMIIDLD HQG+G
Sbjct: 126 KVGLCVNTAGGTHHAHRDRGSGFCIVNDLAVSALRAIDSGAVSRVMIIDLDVHQGDGTAA 185
Query: 209 DFSSDSRVYILDMFNPGIYP-RDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTF 267
+++ V+ +P R ++ R VE+ G T + Y+ + A+ + F
Sbjct: 186 ILANEPGVFTFSAHAKSNFPARKQQSTR----DVELPRGMTDDAYMAVVAAAMRESLEDF 241
Query: 268 DPELVIYNAGTDILEGDPLGMLKV 291
PELVIY+AG D+ D LG L +
Sbjct: 242 RPELVIYDAGVDVTSNDTLGHLDL 265
>gi|398931340|ref|ZP_10665142.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM48]
gi|398163792|gb|EJM51942.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM48]
Length = 325
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 129/276 (46%), Gaps = 22/276 (7%)
Query: 20 RILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCI 79
RIL S + + I LPLIY DY F H F K+ + L G +
Sbjct: 9 RILLS--FLNEIIMPLPLIYHEDYSPEF---PADHRFPMDKFRLLRDHLVDSGLTRDVDL 63
Query: 80 VEPLEASKEDLLVVHSESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQ 136
+ P + L + H SY++ S S + +P + L +R V +
Sbjct: 64 LRPDLCPADILALAHDPSYIERYMSGELSREDQRRLGLP----WSEALARRTV-----RA 114
Query: 137 VGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMII 196
VGG++LAA+ A E G A ++ GG HH D GFC + D+++ HY ++RV+I
Sbjct: 115 VGGSLLAAEQALEHGLACHLAGGTHHAHYDYPAGFCIFNDLAVISHYLLESGRVNRVLIF 174
Query: 197 DLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP-RDYEARRFIDQKVEVVSGTTTNEYLKK 255
D D HQG+G + + + + +P R E+ D + + +G +YLK
Sbjct: 175 DCDVHQGDGTARILHNTPEAVTVSLHCEKNFPARKAES----DWDIPLPNGMGDTDYLKV 230
Query: 256 LDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+D+AL + P+LV+Y+AG D+ + D LG LK+
Sbjct: 231 VDDALNYLLPLYQPDLVLYDAGVDVHKDDALGYLKL 266
>gi|428770468|ref|YP_007162258.1| histone deacetylase [Cyanobacterium aponinum PCC 10605]
gi|428684747|gb|AFZ54214.1| Histone deacetylase [Cyanobacterium aponinum PCC 10605]
Length = 300
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 123/262 (46%), Gaps = 18/262 (6%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LP++Y DY + + H F K+ + + L + + + +P A+ + L +
Sbjct: 1 MNLPVVYHSDY---VTPLPEQHRFPMPKFKLLYELLLKDQIITQESTYKPTIANDKLLQL 57
Query: 93 VHSESYLKSLQSSP---NVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
VH+E+Y+ I +P + LV+R VGGTIL +LA E
Sbjct: 58 VHNETYVSQFCDGTLDDKSKRRIGLP----WSEGLVKRTC-----TAVGGTILTVQLALE 108
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKD 209
G N+ GG HH D G GFC + DI++ Y ++ +++++IIDLD HQG+G
Sbjct: 109 HGICCNLAGGTHHAFPDYGSGFCIFNDIAIASRYLLIEKIVNKILIIDLDVHQGDGTAFI 168
Query: 210 FSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDP 269
F D RV+ M +P Y ++ D + + G + YL+ L L P
Sbjct: 169 FRDDERVFTFSMHCEANFP--YRKQKS-DLDIPLPIGLDDDGYLQILAFHLTDLLKQVKP 225
Query: 270 ELVIYNAGTDILEGDPLGMLKV 291
++VIY+AG D+ D LG L +
Sbjct: 226 DIVIYDAGVDVSGCDRLGKLSL 247
>gi|187929021|ref|YP_001899508.1| histone deacetylase superfamily protein [Ralstonia pickettii 12J]
gi|187725911|gb|ACD27076.1| histone deacetylase superfamily [Ralstonia pickettii 12J]
Length = 334
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 108/225 (48%), Gaps = 33/225 (14%)
Query: 81 EPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPF------- 133
E A + LL+ H+ Y++++ + + P QR++ +P+
Sbjct: 57 EAPRADDDALLLAHTSEYVEAVSAG-------RLDPAR-------QREIGFPWSPEMVER 102
Query: 134 -RKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISR 192
R+ G T+ A + A G A+N+ GG HH AD+GGGFC + D ++ + +Q R
Sbjct: 103 SRRSAGATMAACEAALADGIAVNLAGGTHHAYADKGGGFCVFNDAAIASRW--IQRRPGR 160
Query: 193 ------VMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSG 246
V I+DLD HQGNG D+ V+ L + YP EA D + + G
Sbjct: 161 TPANFPVAIVDLDVHQGNGTASILRDDAAVFTLSLHGEKNYPFRKEAS---DLDIGLHDG 217
Query: 247 TTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+YL+ L AL++ F P+L+IY AG D EGD LG LK+
Sbjct: 218 CGDEDYLQALTGALDILAGRFKPQLIIYLAGADPHEGDRLGRLKL 262
>gi|16127878|ref|NP_422442.1| histone deacetylase [Caulobacter crescentus CB15]
gi|221236699|ref|YP_002519136.1| deacetylase [Caulobacter crescentus NA1000]
gi|13425404|gb|AAK25610.1| histone deacetylase family protein [Caulobacter crescentus CB15]
gi|220965872|gb|ACL97228.1| deacetylase [Caulobacter crescentus NA1000]
Length = 304
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 120/260 (46%), Gaps = 20/260 (7%)
Query: 36 PLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHS 95
P+++ P + + H F K+ R+ L +E + P E L + HS
Sbjct: 6 PIVHHPAFRAE---MPAGHRFPMDKFSRLAALLEAERVAGPDGFARPEPVDVETLCLAHS 62
Query: 96 ESYLKSLQSSPNVSIIIEVPPVAL----FPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
E Y++ + I + +PP + PN V R GGT+LAA+LA ERG
Sbjct: 63 EDYVRGV-------IELSLPPDIVRRIGMPN---TESVATRARAATGGTLLAARLALERG 112
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A N GG HH +AD G GFC + D+++ + I + +++DLD HQG+G + F
Sbjct: 113 IACNTAGGSHHAAADAGAGFCVFNDVAVAARRLLAEGAIGKALVVDLDVHQGDGTARIFE 172
Query: 212 SDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPEL 271
+D V+ M +P + D +E+ GT YL KL+ L + P++
Sbjct: 173 NDPSVFTFSMHAEKNFPHRKASS---DLDIELSDGTDDGAYLAKLEAILPALLISVRPDI 229
Query: 272 VIYNAGTDILEGDPLGMLKV 291
V +NAG D D LG L +
Sbjct: 230 VFFNAGVDPHADDKLGRLAL 249
>gi|300773816|ref|ZP_07083685.1| histone deacetylase [Sphingobacterium spiritivorum ATCC 33861]
gi|300759987|gb|EFK56814.1| histone deacetylase [Sphingobacterium spiritivorum ATCC 33861]
Length = 334
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 110/245 (44%), Gaps = 23/245 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSL-QSSPNVSIII 112
H F K+ I L EG + K+ EP S+E + H ESY++ L + + + +I
Sbjct: 51 HRFPMLKYELIPMQLIHEGLVSKDSFFEPELVSEEIACLAHDESYVRDLFELTLDARMIR 110
Query: 113 EVPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGG 170
+ FP + L++R+ R V GTI A A + G A NV GG HH G G
Sbjct: 111 RIG----FPLTDSLIRRE-----RLIVDGTIRTALFAIQYGIAFNVAGGTHHAGYAYGEG 161
Query: 171 FCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRD 230
FC D ++ Y + +++IIDLD HQGNG F V+ M +P
Sbjct: 162 FCLLNDQAIAAAYLLAEQKAHKILIIDLDVHQGNGTANIFKGSKAVFTFSMHGAKNFP-- 219
Query: 231 YEARRFIDQK----VEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPL 286
FI ++ + + G T YL +L L P+ V Y AG D+L D L
Sbjct: 220 -----FIKEQSHLDISLEDGITDKNYLSQLTTVLPDLFEKVAPDFVFYQAGVDVLATDKL 274
Query: 287 GMLKV 291
G LK+
Sbjct: 275 GKLKL 279
>gi|124006476|ref|ZP_01691309.1| histone deacetylase superfamily [Microscilla marina ATCC 23134]
gi|123987889|gb|EAY27569.1| histone deacetylase superfamily [Microscilla marina ATCC 23134]
Length = 300
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 109/238 (45%), Gaps = 13/238 (5%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ + + L EG + + PL ++E +L H Y + L+ N+ + +
Sbjct: 18 HRFPMEKYNLLPEQLLYEGIAEPDSFFAPLPVAEEWILKAHDPVYWQRLK---NLELSHK 74
Query: 114 VPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGF 171
FP LV R+++ GTI A A E G ++N+ GG HH D G GF
Sbjct: 75 EARRTGFPLSAGLVHREIVI-----AQGTIDCALYALELGVSLNIAGGTHHAFTDRGEGF 129
Query: 172 CAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDY 231
C DI++ HY + ++V++IDLD HQGNG + F D+RV+ M YP
Sbjct: 130 CLLNDIAIAAHYLLDKQLATKVLVIDLDVHQGNGTAEIFQYDNRVFTFSMHGAKNYPLRK 189
Query: 232 EARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGML 289
E D + + G YL L + L P+ V + +G D+L D LG L
Sbjct: 190 EIS---DLDIALPDGANDMTYLTTLRKTLPGLVAEVKPDFVFFQSGVDVLATDKLGRL 244
>gi|332663265|ref|YP_004446053.1| histone deacetylase [Haliscomenobacter hydrossis DSM 1100]
gi|332332079|gb|AEE49180.1| Histone deacetylase [Haliscomenobacter hydrossis DSM 1100]
Length = 300
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 112/257 (43%), Gaps = 12/257 (4%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
L + Y P Y + + H F K+ I + L EG + P + +L+ H
Sbjct: 2 LKIAYDPIYKYK---LPEGHRFPMIKYELIPEQLLYEGTVSAENFFNPGPLDEASILLTH 58
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAI 154
+ Y + L+ I L LV+R R GT+ A A++ G A+
Sbjct: 59 TLEYWQRLRDQQLTEREIRAIGFPLTTQ-LVERS-----RTIANGTLQCAFYAQQYGVAM 112
Query: 155 NVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDS 214
NV GG HH A G GFC DI++ +Y + ++++IDLD HQGNG F +D
Sbjct: 113 NVAGGTHHAYAFRGEGFCCTNDIAVAANYLLHHQLLKKILVIDLDVHQGNGTAHIFRNDP 172
Query: 215 RVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIY 274
RV+ M YP E D + + T YL+ L + L PELV Y
Sbjct: 173 RVFTFSMHGAKNYPLRKEVS---DLDIGLPDKTDDRTYLRILKKTLPELLENVQPELVFY 229
Query: 275 NAGTDILEGDPLGMLKV 291
+G D+LE D LG L +
Sbjct: 230 LSGVDVLESDKLGRLSL 246
>gi|239814774|ref|YP_002943684.1| histone deacetylase [Variovorax paradoxus S110]
gi|239801351|gb|ACS18418.1| Histone deacetylase [Variovorax paradoxus S110]
Length = 311
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 102/215 (47%), Gaps = 19/215 (8%)
Query: 84 EASKEDLLVVHSESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGT 140
A+ +L + H+ ++ ++ SP I P + +V+R R+ G T
Sbjct: 48 RATDGELALAHTPQWIAAISDGSVSPQAMREIGFP----WSEAMVERS-----RRSTGAT 98
Query: 141 ILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNIS----RVMII 196
I A + A G A N+ GG HH AD+GGGFC + D ++ + + +V +I
Sbjct: 99 IAACRAAFAGGVAANMAGGTHHAYADKGGGFCVFNDAAVAARLMQAEHGRAGRQLKVAVI 158
Query: 197 DLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKL 256
DLD HQGNG F SD V+ L + +P EA D VE+ G +YL L
Sbjct: 159 DLDVHQGNGTASIFRSDPSVFTLSLHGQKNFPFRKEAS---DLDVELPDGCGDADYLTAL 215
Query: 257 DEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ AL+ F P LVIY AG D E D LG LK+
Sbjct: 216 EHALDELERRFSPGLVIYLAGADPFERDRLGRLKL 250
>gi|409099281|ref|ZP_11219305.1| histone deacetylase [Pedobacter agri PB92]
Length = 300
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 113/246 (45%), Gaps = 25/246 (10%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ I L EG +D+N + P ++ +L+ H +Y + L+ +
Sbjct: 18 HRFPMLKYELIPGQLLHEGTIDQNNLFSPNLVDEDIILLTHDANYWRQLRE-------LT 70
Query: 114 VPPVALFPNCLVQRKVLYPFRKQV--------GGTILAAKLAKERGWAINVGGGFHHCSA 165
+PP QR++ +P Q+ GTI A + G A N GG HH +
Sbjct: 71 LPPKE-------QRRIGFPLNAQLVERELRITQGTIDGTGYAIKNGIAFNAAGGTHHSGS 123
Query: 166 DEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
+ G GFC D ++ +Y + + R++I+DLD HQGNG + F ++ RV+ M
Sbjct: 124 NWGEGFCLLNDQAIAANYLINKNLVDRILIVDLDVHQGNGTAEIFRNEPRVFTFSMHGDK 183
Query: 226 IYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDP 285
+P E D V + +EYL L+ L+ A +PE V Y AG D+L D
Sbjct: 184 NFPFRKEIS---DLDVALEDHIGDDEYLSLLEVNLQQAFEKSNPEFVFYLAGVDVLSTDK 240
Query: 286 LGMLKV 291
LG L +
Sbjct: 241 LGKLAL 246
>gi|330445427|ref|ZP_08309079.1| histone deacetylase domain protein [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
gi|328489618|dbj|GAA03576.1| histone deacetylase domain protein [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
Length = 302
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 125/265 (47%), Gaps = 27/265 (10%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPL+Y P Y S L + + H + +K+ + + + +K + +P +A + +H
Sbjct: 2 LPLVYHPIY--SALSLPEKHRYPINKYRLLYEAIMDSAHANKVSVHQPNKADINKVKALH 59
Query: 95 SESYLKSLQSSPNVSIIIEVPPVAL----FP--NCLVQRKVLYPFRKQVGGTILAAKLAK 148
+ Y+ +L ++ ++P + FP L++R + GGT L LA
Sbjct: 60 APEYVDALCNN-------QLPAAKMRRIGFPWSEALIERTLF-----STGGTQLTVDLAL 107
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEK 208
E G AI++ GG+HH D G GFC + D++ +A +I +VMIID D H G+G
Sbjct: 108 EHGIAIHLSGGYHHAHHDFGSGFCLFNDLAFAAKHALSYTHIDKVMIIDCDVHHGDGTAT 167
Query: 209 DFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVV--SGTTTNEYLKKLDEALEVAGHT 266
+ + + + +P R D +++ T+T +YL L +A
Sbjct: 168 LLADNPNIITFSVHCDKNFP-----ARKPDSTIDLALPRETSTEDYLNAFTGLLPLALAQ 222
Query: 267 FDPELVIYNAGTDILEGDPLGMLKV 291
+ P+LVIY+AG DI + D LG V
Sbjct: 223 YQPDLVIYDAGVDIHQHDELGYFNV 247
>gi|88809136|ref|ZP_01124645.1| putative histone deacetylase/AcuC/AphA family protein
[Synechococcus sp. WH 7805]
gi|88787078|gb|EAR18236.1| putative histone deacetylase/AcuC/AphA family protein
[Synechococcus sp. WH 7805]
Length = 304
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 118/264 (44%), Gaps = 26/264 (9%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
K PL+Y Y + H F +K+ + + L G D + + PL + L +
Sbjct: 1 MKPPLVYHEAYSAP---LPSSHRFPMAKFRELERCLFDCGLADSSQMHRPLPVPRRWLEL 57
Query: 93 VHSESYLKSL-------QSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK 145
VH +Y ++ Q+ + + P LV+R + VGGT+L A+
Sbjct: 58 VHQRAYHEAFARDRLDRQAQRRIGLPATTP--------LVRRTWI-----AVGGTLLTAR 104
Query: 146 LAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
LA G A ++ GG HH D G GFC + D+++C Q + RV+++DLD HQG+
Sbjct: 105 LALRHGLACHLAGGTHHAFPDFGSGFCIFNDLAVCARVLIEQDGLQRVLVVDLDVHQGDA 164
Query: 206 HEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGH 265
FS D RV+ +P ++ D + + G +YL+ + + L
Sbjct: 165 TALIFSGDERVFTFSAHAASNFP---SRKQVSDLDLSLRDGLEDWDYLQTIGDHLPELLD 221
Query: 266 TFDPELVIYNAGTDILEGDPLGML 289
P+LV+YNAG D D LG L
Sbjct: 222 RQRPQLVLYNAGVDPHRDDRLGRL 245
>gi|416220187|ref|ZP_11625279.1| histone deacetylase family protein [Moraxella catarrhalis 103P14B1]
gi|326566775|gb|EGE16914.1| histone deacetylase family protein [Moraxella catarrhalis 103P14B1]
Length = 301
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 117/243 (48%), Gaps = 19/243 (7%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F +K+ I + L ++G + ++ + P S++++L H+ Y L++ E
Sbjct: 18 HRFPMAKYDLIPKKLLTDGIITQDNLFHPELLSEQEILSTHTADYWHKLKTGTLTDK--E 75
Query: 114 VPPVAL-FPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFC 172
+ + L L++R+ R T A AK+ G +++V GG HH AD G GFC
Sbjct: 76 IRKIGLPMSASLIKRE-----RYITHATYECALYAKKYGISLSVSGGTHHGFADHGEGFC 130
Query: 173 AYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYE 232
+ D+ + + + R++ +DLD HQGNG+ +++ V++ M YP
Sbjct: 131 VFNDVCVASNLLLARGQAKRILSVDLDVHQGNGNASIMANNPAVFVFSMHGKKNYP---- 186
Query: 233 ARRFI----DQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGM 288
FI D +E+ GT YL L + L H FDP+++ Y AG D+L D LG
Sbjct: 187 ---FIKPPSDLDIELDDGTGDEAYLTILGKTLPKIIHNFDPDMLFYQAGVDVLATDKLGK 243
Query: 289 LKV 291
L +
Sbjct: 244 LSL 246
>gi|416155844|ref|ZP_11604137.1| histone deacetylase family protein [Moraxella catarrhalis 101P30B1]
gi|416217146|ref|ZP_11624095.1| histone deacetylase family protein [Moraxella catarrhalis 7169]
gi|416239194|ref|ZP_11631744.1| histone deacetylase family protein [Moraxella catarrhalis BC1]
gi|416250103|ref|ZP_11637112.1| histone deacetylase family protein [Moraxella catarrhalis CO72]
gi|326560997|gb|EGE11362.1| histone deacetylase family protein [Moraxella catarrhalis 7169]
gi|326567382|gb|EGE17497.1| histone deacetylase family protein [Moraxella catarrhalis BC1]
gi|326575226|gb|EGE25154.1| histone deacetylase family protein [Moraxella catarrhalis CO72]
gi|326576687|gb|EGE26594.1| histone deacetylase family protein [Moraxella catarrhalis 101P30B1]
Length = 301
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 117/243 (48%), Gaps = 19/243 (7%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F +K+ I + L ++G + ++ + P S++++L H+ Y L++ E
Sbjct: 18 HRFPMAKYDLIPKKLLTDGIITQDNLFHPELLSEQEILSTHTADYWHKLKTGTLTDK--E 75
Query: 114 VPPVAL-FPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFC 172
+ + L L++R+ R T A AK+ G +++V GG HH AD G GFC
Sbjct: 76 IRKIGLPMSASLIKRE-----RYITHATYECALYAKKYGISLSVSGGTHHGFADHGEGFC 130
Query: 173 AYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYE 232
+ D+ + + + R++ +DLD HQGNG+ +++ V++ M YP
Sbjct: 131 VFNDVCVASNLLLARGQAKRILSVDLDVHQGNGNASIMANNPAVFVFSMHGKKNYP---- 186
Query: 233 ARRFI----DQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGM 288
FI D +E+ GT YL L + L H FDP+++ Y AG D+L D LG
Sbjct: 187 ---FIKPPSDLDIELDDGTGDEAYLTILGKTLPKIIHNFDPDMLFYQAGVDVLATDKLGK 243
Query: 289 LKV 291
L +
Sbjct: 244 LSL 246
>gi|374330069|ref|YP_005080253.1| histone deacetylase superfamily protein [Pseudovibrio sp. FO-BEG1]
gi|359342857|gb|AEV36231.1| histone deacetylase superfamily [Pseudovibrio sp. FO-BEG1]
Length = 279
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 108/219 (49%), Gaps = 25/219 (11%)
Query: 81 EPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYP------FR 134
EP S++DLL VH+ Y+ + S P+ +V R++ +P FR
Sbjct: 25 EPAPISRDDLLRVHAREYVDQVLSCT-------------VPHAIV-REIGFPMTESVSFR 70
Query: 135 KQ--VGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISR 192
Q GG++L A LA E G A N GG HH +G GFC + D+++ + + R
Sbjct: 71 AQCATGGSLLTAMLALEHGVACNTAGGSHHARIAQGAGFCVFNDVAVAVRAVQAMRMVRR 130
Query: 193 VMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEY 252
V+IIDLD HQG+G F+ D+ V+ L + + YP ++ V + G +EY
Sbjct: 131 VLIIDLDVHQGDGTADIFAHDTSVFTLSLHSEKNYPVRKKSSTL---DVPLEDGMEDDEY 187
Query: 253 LKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
L L++ L+ TF +LV +NAG D D LG L +
Sbjct: 188 LSILEDTLKRVLTTFKADLVFFNAGVDPHHDDRLGRLAL 226
>gi|114048034|ref|YP_738584.1| histone deacetylase superfamily protein [Shewanella sp. MR-7]
gi|113889476|gb|ABI43527.1| histone deacetylase superfamily [Shewanella sp. MR-7]
Length = 300
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 123/260 (47%), Gaps = 17/260 (6%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+PL+Y Y S L + H F ++K+ R+ Q+L P + ED++ VH
Sbjct: 2 IPLVYHASY--SKLALPSHHRFPTTKYARLYQYLLDNQLAVPAQFHTPSPMTAEDVMQVH 59
Query: 95 SESYLKS-LQSSPNVSIIIEVPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
+ Y++ +Q S + + + + FP LV+R + V GT L A LA + G
Sbjct: 60 QQDYVEQFIQGSLSSTALRRIG----FPWSEALVERTL-----HSVSGTSLTAHLAMQTG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A+++ GG+HH D G G+C + D+ + + + +V+I D D HQG+G
Sbjct: 111 IALHLTGGYHHAHYDFGSGYCIFNDLIIAARKLMAEQQLHKVLIFDCDVHQGDGTATLSH 170
Query: 212 SDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPEL 271
+ + +P + + +E+ G + Y + +++ LE+ P+L
Sbjct: 171 KHQGIISCSIHCKENFPSRKQQSHY---DIELTKGADDSAYQETVEQTLELLIRLHQPDL 227
Query: 272 VIYNAGTDILEGDPLGMLKV 291
++Y+AG DI + D LG LK+
Sbjct: 228 ILYDAGVDIHQDDDLGHLKI 247
>gi|149917141|ref|ZP_01905641.1| Histone deacetylase superfamily protein [Plesiocystis pacifica
SIR-1]
gi|149822057|gb|EDM81450.1| Histone deacetylase superfamily protein [Plesiocystis pacifica
SIR-1]
Length = 623
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/236 (32%), Positives = 106/236 (44%), Gaps = 14/236 (5%)
Query: 55 PFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE- 113
P D + RI L EG + C+V P A+ L VH ++YL+ L+S+ +
Sbjct: 46 PVDGMRGERILSALVREGLVGPECVVRPTPAAFVKLARVHDQAYLERLESAAVMEQAFGE 105
Query: 114 -VPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKER-GWAINVGGGFHHCSADEGGGF 171
VPP +QR + VGGT+LAA+ A R A+N+GGGFHH D GGF
Sbjct: 106 VVPPGPATAIVELQRAM-------VGGTMLAARAAWRRHKLAVNLGGGFHHARRDRAGGF 158
Query: 172 CAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDY 231
C D+++ I + ++DLD H G+G F+ D V+ + N P
Sbjct: 159 CLLNDVAVAIAELRASGFTGPISVVDLDLHDGDGTRLMFADDPSVWTFSIHNRHWAPTQA 218
Query: 232 EARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLG 287
+ I +V +YL L L A P LV Y AG D + DPLG
Sbjct: 219 VSSTAIALGDDV----GDRDYLGALRSHLPRALDAHRPSLVFYLAGCDPADDDPLG 270
>gi|373957064|ref|ZP_09617024.1| histone deacetylase superfamily [Mucilaginibacter paludis DSM
18603]
gi|373893664|gb|EHQ29561.1| histone deacetylase superfamily [Mucilaginibacter paludis DSM
18603]
Length = 300
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 111/241 (46%), Gaps = 15/241 (6%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESY---LKSLQSSPNVSI 110
H F K+ I Q L EG + + + P + +L+ H + Y L+ L S
Sbjct: 18 HRFPMLKYELIPQQLLHEGVITSDNLFSPDAVDEATILLSHQKDYWEQLRDLTLSAKEQR 77
Query: 111 IIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGG 170
I P A LV+R+V + GTI A E G A NV GG HH ++ G G
Sbjct: 78 RIGFPLSAR----LVEREV-----RIAKGTIDGCYFAFEHGVAFNVAGGTHHAGSNWGEG 128
Query: 171 FCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRD 230
FC D ++ +Y + + V+I+DLD HQGNG + F ++SRV+ M +P
Sbjct: 129 FCMLNDQAIAANYLLAEKLATSVLIVDLDVHQGNGTAQIFENESRVFTFSMHGANNFPSR 188
Query: 231 YEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLK 290
E D + + GT+ +++L L L P+ + Y AG D+LE D LG L
Sbjct: 189 KEKS---DLDLPLPDGTSDDQFLSLLKNTLPQLIEQQKPDFIFYLAGVDVLESDKLGKLA 245
Query: 291 V 291
+
Sbjct: 246 L 246
>gi|262277700|ref|ZP_06055493.1| histone deacetylase family protein [alpha proteobacterium HIMB114]
gi|262224803|gb|EEY75262.1| histone deacetylase family protein [alpha proteobacterium HIMB114]
Length = 300
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 128/257 (49%), Gaps = 13/257 (5%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LP+I PDY ++ +G + H F K+G + + L + EP E S LL VH
Sbjct: 2 LPIINHPDY-VAQIGDD--HRFPIKKFGELIKLLRKKNIATTYNTFEPDEVSVPTLLNVH 58
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAI 154
SE Y+ + N+S+ + FP R+ + GGT+LA+KLA + A
Sbjct: 59 SEEYINKIN---NLSLDKDEIRKLGFPLVTSVRRRSFV---ATGGTVLASKLAVKHKLAC 112
Query: 155 NVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDS 214
N GG HH +++G G+C + D+++ Y + +++IIDLD HQG+G K F SD
Sbjct: 113 NTAGGSHHAFSNQGNGYCVFNDVAVATSYLKKKYKYKKILIIDLDVHQGDGTAKIFESDD 172
Query: 215 RVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIY 274
V+ + + + YP + + ID +E+ G EYL +++ L+ F + V Y
Sbjct: 173 SVFTVSIHSKKNYPSK-KQKSNID--IELEDGIKDEEYLNVVNQLLQKI-EDFQFDFVFY 228
Query: 275 NAGTDILEGDPLGMLKV 291
AG D+ D LG L +
Sbjct: 229 IAGVDVHFEDRLGKLNI 245
>gi|347754121|ref|YP_004861685.1| deacetylase [Candidatus Chloracidobacterium thermophilum B]
gi|347586639|gb|AEP11169.1| Deacetylase, including histone deacetylase and acetoin utilization
protein [Candidatus Chloracidobacterium thermophilum B]
Length = 299
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 114/256 (44%), Gaps = 18/256 (7%)
Query: 39 YSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESY 98
Y+P Y F+ I H F K+ R+ L EG L +V P A +ED+L+ H+ Y
Sbjct: 5 YAPGY---FVDIGDAHVFPMVKFPRVHAQLIEEGTLSPEDVVAPAPAREEDILLAHTRDY 61
Query: 99 LKSL---QSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAIN 155
L Q +P + +P + LV R R GT+ AA+ A G A N
Sbjct: 62 WTRLAAGQLTPRELRRLGLP----WSEGLVMRA-----RLAAQGTLNAARHALAEGVAGN 112
Query: 156 VGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSR 215
+ GG HH D G GFC DI++ + + ++ RV +ID D HQGN + F+ +S
Sbjct: 113 LAGGTHHAFPDHGEGFCVLNDIAIAVRVLQREGDVGRVALIDCDVHQGNANAVIFAGESD 172
Query: 216 VYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYN 275
V+ M YP +E+ G T YL+ L E + F P+LV Y
Sbjct: 173 VFTFSMHGRNNYPLRKPPGSL---DLELPDGMTDAAYLEILREYVPRILAAFRPDLVFYL 229
Query: 276 AGTDILEGDPLGMLKV 291
AG D D G L +
Sbjct: 230 AGVDPYVHDRFGRLAL 245
>gi|260219472|emb|CBA26317.1| Uncharacterized protein SYNPCC7002_A1628 [Curvibacter putative
symbiont of Hydra magnipapillata]
Length = 317
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 120/252 (47%), Gaps = 28/252 (11%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS-LQSSPNVSIII 112
H F +K+ + ++ E L + E A++ +L +VH+ +Y+ S LQ + +++
Sbjct: 17 HRFPMAKYRMLRDRIADE--LPSIQLTEAPAATEGELALVHTPAYIDSILQGTAEPAVLR 74
Query: 113 EVPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGG 170
E+ FP + +R + + VG T+ AA++A G A N+ GG HH A +GGG
Sbjct: 75 EIG----FPWSPAMAERAL-----RSVGATVAAARVAMIEGLAANLAGGTHHAYAHKGGG 125
Query: 171 FCAYADISLCIHYAFVQLNISR-----------VMIIDLDAHQGNGHEKDFSSDSRVYIL 219
FC + D+++ + SR V +IDLD HQGNG F D V+ L
Sbjct: 126 FCVFNDLAVAARVLQAEWGRSRHPDGSRRQPLQVAVIDLDVHQGNGTASIFRHDESVFTL 185
Query: 220 DMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTD 279
+ +P E D + + G EYL L+ AL+ F P LV + AG D
Sbjct: 186 SLHGDKNFPFRKEDS---DLDIPLPDGCADAEYLSTLEHALQELEGRFTPGLVFFLAGAD 242
Query: 280 ILEGDPLGMLKV 291
EGD LG LK+
Sbjct: 243 PHEGDRLGRLKL 254
>gi|436836803|ref|YP_007322019.1| Histone deacetylase [Fibrella aestuarina BUZ 2]
gi|384068216|emb|CCH01426.1| Histone deacetylase [Fibrella aestuarina BUZ 2]
Length = 305
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 106/238 (44%), Gaps = 9/238 (3%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ I + L +G + P +L VH+ Y+ +L++ + ++
Sbjct: 23 HRFPMIKYELIHEQLLYDGTCTEANFFAPSPVDDRWVLGVHTAGYVDALKTQTVDARMVR 82
Query: 114 VPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCA 173
+ P + + V+ GT+ A A+ G A+NV GG HH D G GFC
Sbjct: 83 RIGFPMSPRLIEREWVI------TQGTLDATHHARRDGVAMNVAGGTHHAYPDHGEGFCL 136
Query: 174 YADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEA 233
D+ + HY ++++IDLD HQGNG F + RV+ M YP E
Sbjct: 137 LNDVGVAAHYLLETGQARQILVIDLDVHQGNGTAVMFQGEPRVFTFSMHGKDNYPLKKEQ 196
Query: 234 RRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
D VE+ +GT + YL L + L P+ + Y AG DILE D LG L V
Sbjct: 197 S---DLDVELATGTRDDTYLNLLYDTLPRLLTDQQPDFLFYVAGVDILETDRLGRLGV 251
>gi|352096237|ref|ZP_08957117.1| Histone deacetylase [Synechococcus sp. WH 8016]
gi|351676931|gb|EHA60082.1| Histone deacetylase [Synechococcus sp. WH 8016]
Length = 282
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 107/238 (44%), Gaps = 23/238 (9%)
Query: 59 SKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSL-------QSSPNVSII 111
+K+ + L++ G + N I PL + L VH Y ++ Q+ + +
Sbjct: 2 AKFKMLFSALNALGLAESNQIHAPLPIPRRWLETVHQRRYHEAFARGRLDRQAQRRIGLP 61
Query: 112 IEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGF 171
P LVQR L VGGT+L A+LA E G A ++ GG HH +D G GF
Sbjct: 62 ATTP--------LVQRTWL-----AVGGTLLTARLALEHGVACHLAGGTHHAFSDYGSGF 108
Query: 172 CAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDY 231
C + DI++ + + R+MI+DLD HQG+ F+ D RV+ +P
Sbjct: 109 CIFNDIAVSARVLLDEGRLERLMIVDLDVHQGDATAVIFADDPRVFTFSAHAASNFPSRK 168
Query: 232 EARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGML 289
++ D + G YL + E L F PELV+YNAG D D LG L
Sbjct: 169 QSS---DCDLPFEDGVEDQGYLAAVGEVLPSLLDRFKPELVLYNAGVDPHRDDRLGRL 223
>gi|428224317|ref|YP_007108414.1| histone deacetylase [Geitlerinema sp. PCC 7407]
gi|427984218|gb|AFY65362.1| Histone deacetylase [Geitlerinema sp. PCC 7407]
Length = 305
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 120/262 (45%), Gaps = 18/262 (6%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LPL+Y PDY I + H F +K+ + + L +G + +P + E L
Sbjct: 1 MDLPLVYHPDYVIP---LPAGHRFPMAKFRLLYESLIQDGVAHASQFHQPEYPTPEILAH 57
Query: 93 VHSESYLKSLQSS---PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
VH Y+++ I +P + + LV+R VGGT+L A++A E
Sbjct: 58 VHGPDYIQAYCEGTLDAKAQRRIGLP----WSSALVRRTC-----TAVGGTLLTARMALE 108
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKD 209
G A N GG HH + G GFC + D+++ + + +V+I+DLD HQG+G
Sbjct: 109 HGLACNTAGGTHHAFPNHGSGFCIFNDLAIAARVLQAEGVVQKVLIVDLDVHQGDGTALI 168
Query: 210 FSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDP 269
F D V+ M +P ++ D V + G + YL+ L + L P
Sbjct: 169 FQDDPSVFTFSMHCEVNFP---GTKQRSDLDVPLPEGLEDDAYLQTLAQYLPDLLSQVKP 225
Query: 270 ELVIYNAGTDILEGDPLGMLKV 291
+LV+Y+AG D GD LG L +
Sbjct: 226 DLVLYDAGADPHVGDRLGKLAL 247
>gi|326800435|ref|YP_004318254.1| histone deacetylase [Sphingobacterium sp. 21]
gi|326551199|gb|ADZ79584.1| Histone deacetylase [Sphingobacterium sp. 21]
Length = 300
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 109/238 (45%), Gaps = 9/238 (3%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ I + L EG + N P E + + + H +Y + L++ + I
Sbjct: 18 HRFPMLKYELIPEQLVYEGTVLPNAFFRPHEVDEHYITLAHQITYWEKLKNLNLSTKEIR 77
Query: 114 VPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCA 173
+L LV R++ V GTI A + G A N+ GG HH ++ G GFC
Sbjct: 78 RTGFSL-SKLLVYREI-----SIVQGTIECCDHALQDGIAFNIAGGTHHAGSNWGEGFCL 131
Query: 174 YADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEA 233
D ++ HY Q +++IIDLD HQGNG F S+ RV+ M +P E
Sbjct: 132 LNDQAIGAHYLLSQKKAKKILIIDLDVHQGNGTADIFKSEQRVFTFSMHCQRNFPFRKEH 191
Query: 234 RRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
D + + G EYL L++ L+ + PE V Y AG D+LE D LG L +
Sbjct: 192 S---DLDIGLPEGVGDEEYLGILEKNLDALFNQVKPEFVFYLAGVDVLETDKLGWLSL 246
>gi|404396176|ref|ZP_10987971.1| hypothetical protein HMPREF0989_05014 [Ralstonia sp. 5_2_56FAA]
gi|404278975|gb|EJZ44406.1| hypothetical protein HMPREF0989_05014 [Ralstonia sp. 5_2_56FAA]
Length = 335
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 107/225 (47%), Gaps = 33/225 (14%)
Query: 81 EPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPF------- 133
E A + LL+ H+ Y++++ + + P QR++ +P+
Sbjct: 57 EAPRADDDALLLAHTFEYVEAVSAG-------RLDPAR-------QREIGFPWSPEMVER 102
Query: 134 -RKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISR 192
R+ G T+ A A G A+N+ GG HH AD+GGGFC + D ++ + +Q R
Sbjct: 103 SRRSAGATMAACDAALADGIAVNLAGGTHHAYADKGGGFCVFNDAAIASRW--IQRQSGR 160
Query: 193 ------VMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSG 246
V I+DLD HQGNG D+ V+ L + YP EA D V + G
Sbjct: 161 TPGDFPVAIVDLDVHQGNGTASILRDDATVFTLSLHGEKNYPFRKEAS---DLDVGLHDG 217
Query: 247 TTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+YL+ L AL++ F P+L+IY AG D EGD LG LK+
Sbjct: 218 CGDEDYLQALTGALDILAGRFKPQLIIYLAGADPHEGDRLGRLKL 262
>gi|392554229|ref|ZP_10301366.1| histone deacetylase/AcuC/AphA family protein [Pseudoalteromonas
undina NCIMB 2128]
Length = 295
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 122/262 (46%), Gaps = 18/262 (6%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+ L Y P Y S L + + H F K+ ++ + G+ + P A+K L + H
Sbjct: 1 MQLFYHPLY--SALTLPERHRFPIKKYQQLKHEVERLGYTR---FISPSPATKAQLSLCH 55
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNC--LVQRKVLYPFRKQVGGTILAAKLAKERGW 152
S Y+ N S+ + FP+ LV+R LY VG +I AA+ A E G
Sbjct: 56 SSDYIADF---LNGSLTDKAVKKMGFPHSYKLVER-TLYS----VGASIQAAETALESGL 107
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
A N+ GG+HH ++ G GFC + D+++ + V+I D D HQG+G +
Sbjct: 108 AANLSGGYHHAYSNYGSGFCIFNDLAIAAAHLISTEQADTVLIFDCDVHQGDGTAQITQQ 167
Query: 213 DSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELV 272
++ + +PR +++ + + + TT EYL LD+ALE+ P ++
Sbjct: 168 HEQIISCSIHCEQNFPRQ---KQYSNYDFGLPANTTDAEYLTTLDQALELCVRLHQPYII 224
Query: 273 IYNAGTDILEGDPLGMLKVKWG 294
+YNAG DI D LG+ V
Sbjct: 225 LYNAGADIYTKDELGLFDVSLA 246
>gi|229592755|ref|YP_002874874.1| putative histone deacetylase family protein [Pseudomonas
fluorescens SBW25]
gi|229364621|emb|CAY52526.1| putative histone deacetylase family protein [Pseudomonas
fluorescens SBW25]
Length = 306
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 121/261 (46%), Gaps = 20/261 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G + + ++ P + L + H
Sbjct: 3 LPLIYHDDYSPEF---PAEHRFPMDKFRLLRDHLVDSGLTEDSQLLRPQLCPAQILALAH 59
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
Y++ S S + +P + L +R V + VGG+ILAA+ A E G
Sbjct: 60 DTGYIERYMSGELSREDQRRLGLP----WNEALARRTV-----RAVGGSILAAEQALEHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A ++ GG HH D GFC + D+++ HY ++RV+I D D HQG+G +
Sbjct: 111 LACHLAGGTHHAHYDYPAGFCIFNDLAVISHYLLASGRVNRVLIFDCDVHQGDGTARILH 170
Query: 212 SDSRVYILDMFNPGIYPRDYEARRF-IDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPE 270
+ + +P AR+ D + + G +YLK +D+AL + P+
Sbjct: 171 DTPDAITVSLHCEKNFP----ARKAQSDWDIPLPMGMGDADYLKVVDDALNYLLPLYQPD 226
Query: 271 LVIYNAGTDILEGDPLGMLKV 291
LV+Y+AG D+ + D LG LK+
Sbjct: 227 LVLYDAGVDVHKDDALGYLKL 247
>gi|90580008|ref|ZP_01235816.1| histone deacetylase/AcuC/AphA family protein [Photobacterium
angustum S14]
gi|90438893|gb|EAS64076.1| histone deacetylase/AcuC/AphA family protein [Photobacterium
angustum S14]
Length = 302
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 124/265 (46%), Gaps = 27/265 (10%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY Y S L + + H + +K+ + + + +K I +P A + +H
Sbjct: 2 LPLIYHSQY--SALTLPEKHRYPINKYRLLFEAIFHSELSNKVSIHQPNRADIAKIKAIH 59
Query: 95 SESYLKSLQSSPNVSIIIEVPPVAL----FP--NCLVQRKVLYPFRKQVGGTILAAKLAK 148
Y+ L + +P + FP N L+ R +L GGT L LA
Sbjct: 60 DSEYVDDL-------LFNRLPAAKMRRIGFPWSNELINRTLL-----STGGTQLTVDLAL 107
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEK 208
E G AI++ GG+HH D G GFC + D+++ +A +I +VMIID D H G+G
Sbjct: 108 EHGIAIHLSGGYHHAHHDFGSGFCLFNDLAIAAKHALSYSHIDKVMIIDCDVHHGDGTAT 167
Query: 209 DFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVV--SGTTTNEYLKKLDEALEVAGHT 266
F+ + + + +P AR+ D V++ T+T++YL L L +
Sbjct: 168 LFADNPNIITFSVHCDKNFP----ARK-PDSDVDLALERNTSTDDYLTALQGVLPLLLAQ 222
Query: 267 FDPELVIYNAGTDILEGDPLGMLKV 291
P+LVIY+AG DI + D LG +
Sbjct: 223 HQPDLVIYDAGVDIHQHDELGYFDI 247
>gi|221133465|ref|ZP_03559770.1| histone deacetylase superfamily protein [Glaciecola sp. HTCC2999]
Length = 300
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 122/265 (46%), Gaps = 28/265 (10%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+PL++ P Y S L + H F K+ I L G +D P L ++
Sbjct: 2 IPLVFHPIY--SQLDLPHRHRFPIEKYQGIYDALIKLG-VDCANFHTPQALDPSYLTQIY 58
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTILAAKL 146
Y+ L S ++ P A+ R++ +P+ +Q+ GT+L A+L
Sbjct: 59 DHDYIHQLCSG-------QLDPKAM-------RRIGFPWSEQLIQRTLTAAAGTVLTAEL 104
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
A E G A+N+ GG+HH AD G GFC D+ L + +I V+I D D HQG+G
Sbjct: 105 AMEHGKALNLTGGYHHAFADFGSGFCMVNDLYLAAKTMLINPDIDSVLIFDCDVHQGDGT 164
Query: 207 EKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHT 266
S D+ ++ + + +P + + + GT +EYL+ +D AL +A
Sbjct: 165 ALLASKDNDIFTVSIHGEKNFPHRKQVSNI---DIGLAKGTGDDEYLETVDSALHLAFVQ 221
Query: 267 FDPELVIYNAGTDILEGDPLGMLKV 291
P+ VIY+AG DI D LG L +
Sbjct: 222 AQPDAVIYDAGVDIHINDDLGHLDI 246
>gi|333370018|ref|ZP_08462100.1| histone deacetylase [Psychrobacter sp. 1501(2011)]
gi|332968662|gb|EGK07715.1| histone deacetylase [Psychrobacter sp. 1501(2011)]
Length = 301
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 119/257 (46%), Gaps = 12/257 (4%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
L + +SP I + + H F K+ I + L EG L ++ P + S++++L H
Sbjct: 2 LKVAFSP---IFLYQVPEKHRFPMQKYRLIPERLVQEGTLSEDNFFAPSKVSEQEILTTH 58
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAI 154
+ Y L++ + P LV+R R T A AK+ G ++
Sbjct: 59 TAEYWDKLKTQALSRKEARAIGFEMTPE-LVERG-----RYIAHATYECALYAKQYGVSL 112
Query: 155 NVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDS 214
NV GG HH AD G GFC + D+ + + + ++R++I+DLD HQGNG+ +++
Sbjct: 113 NVAGGTHHSFADHGEGFCVFNDVCIASNLLLSRGEVNRILIVDLDVHQGNGNASIMANEP 172
Query: 215 RVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIY 274
RV++ M YP D +++ + T YL L + L +P+L+ Y
Sbjct: 173 RVFVFSMHGEKNYPFRKPPS---DLDIDLPNETDDETYLNILKQTLPRLIAEHNPDLIFY 229
Query: 275 NAGTDILEGDPLGMLKV 291
+ D+L D LG L +
Sbjct: 230 QSAVDVLATDKLGKLSL 246
>gi|387895767|ref|YP_006326064.1| histone deacetylase family protein [Pseudomonas fluorescens A506]
gi|387163772|gb|AFJ58971.1| histone deacetylase family protein [Pseudomonas fluorescens A506]
Length = 306
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 121/263 (46%), Gaps = 20/263 (7%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LPLIY DY F H F K+ + L G + + ++ P + L +
Sbjct: 1 MSLPLIYHEDYSPEF---PADHRFPMDKFRLLRDHLVDSGLTEDSQLLRPPLCPADILAL 57
Query: 93 VHSESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
H Y++ S S + +P + L +R V + VGG+ILAA+ A E
Sbjct: 58 AHEPGYIERYMSGELSREDQRRLGLP----WSEALARRTV-----RAVGGSILAAEQALE 108
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKD 209
G A ++ GG HH D GFC + D+++ HY ++RV+I D D HQG+G +
Sbjct: 109 HGLACHLAGGTHHAHYDYPAGFCIFNDLAVISHYLLASGRVNRVLIFDCDVHQGDGTARI 168
Query: 210 FSSDSRVYILDMFNPGIYPRDYEARRF-IDQKVEVVSGTTTNEYLKKLDEALEVAGHTFD 268
+ + +P AR+ D + + G +YLK +D+AL +
Sbjct: 169 LHDTPDAITVSLHCEKNFP----ARKAQSDWDIPLPMGMGDADYLKVVDDALNYLLPLYQ 224
Query: 269 PELVIYNAGTDILEGDPLGMLKV 291
P+LV+Y+AG D+ + D LG LK+
Sbjct: 225 PDLVLYDAGVDVHKDDALGYLKL 247
>gi|359451303|ref|ZP_09240710.1| hypothetical protein P20480_3448 [Pseudoalteromonas sp. BSi20480]
gi|358042944|dbj|GAA76959.1| hypothetical protein P20480_3448 [Pseudoalteromonas sp. BSi20480]
Length = 302
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 120/267 (44%), Gaps = 29/267 (10%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPL+Y P+Y SF + H F SK+ + + G + N + +P+ S E L +VH
Sbjct: 7 LPLVYHPNYSFSF---DPKHRFAMSKFANLYAHVKKLGLIGNN-LTQPVLGSPEPLELVH 62
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTILAAKL 146
++Y+ L ++ + A+ R++ P+ Q+ GT+ A+L
Sbjct: 63 CDNYIHDLWNN-------RLDDKAM-------RRIGLPWSAQLMARTFTAPQGTLQTARL 108
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
A + G A ++ GG HH D G G+C D++ ++ V+I DLD HQG+G
Sbjct: 109 ALKHGIACHLAGGTHHAHFDFGSGYCMVNDLAFTTQTLINSGEVTNVLIFDLDVHQGDGT 168
Query: 207 EKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHT 266
+ Y + +P A D + + + EYL +D+ L
Sbjct: 169 AAMLAHQPYAYTCSIHCEKNFPFRKSAS---DLDIGLANHMQDAEYLAIVDDTLSYLLKE 225
Query: 267 FDPELVIYNAGTDILEGDPLGMLKVKW 293
+P LV+Y+AG DI + D LG L + W
Sbjct: 226 LNPSLVLYDAGVDIWQNDGLGKLDISW 252
>gi|428213576|ref|YP_007086720.1| deacetylase [Oscillatoria acuminata PCC 6304]
gi|428001957|gb|AFY82800.1| deacetylase, histone deacetylase/acetoin utilization protein
[Oscillatoria acuminata PCC 6304]
Length = 305
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 117/260 (45%), Gaps = 18/260 (6%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LP++Y PDY + H F K+ + + L + + P ++ + VH
Sbjct: 3 LPIVYHPDY---VAPLPPSHRFPMEKFRLLYEMLLGDRVVTPEQCHTPELPPQDWIESVH 59
Query: 95 SESYLKSLQSS---PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
+Y+++ P I +P + + R + +GG IL AKLA E G
Sbjct: 60 DPAYVQAYCQGTLDPKAQRRIGLP----WTEAIAHRTCI-----SIGGAILTAKLALEHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A N GG HH D G GFC + D+++ I +V+I+DLD HQG+G F
Sbjct: 111 LACNTAGGTHHAFPDFGSGFCIFNDLAIATRMIQKLAGIRKVLIVDLDVHQGDGTAFIFK 170
Query: 212 SDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPEL 271
+D V+ + +P +A D V + G +EYL+ + L F P+L
Sbjct: 171 NDPDVFTFSLHCEANFPGRKQAS---DLDVPLPVGMEDDEYLQTVAHYLPDLLSQFQPDL 227
Query: 272 VIYNAGTDILEGDPLGMLKV 291
V+Y+AG D+ GD LG L +
Sbjct: 228 VLYDAGVDVHAGDRLGKLAL 247
>gi|404448059|ref|ZP_11013053.1| deacetylase [Indibacter alkaliphilus LW1]
gi|403766645|gb|EJZ27517.1| deacetylase [Indibacter alkaliphilus LW1]
Length = 300
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 116/255 (45%), Gaps = 12/255 (4%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
L + +SP Y + K H F K+ + + L EG + P + + H
Sbjct: 2 LKIAWSPKY---CHPLPKGHRFPMDKYNLLPEQLLYEGTVKDENFFSPDALEERWITNTH 58
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAI 154
YL+ L++ I L + LV+R++ + G++ AA A E G A+
Sbjct: 59 QRDYLEKLKNQTLTKSEIRKTGFPL-SDALVEREI-----HIMHGSVKAALYALEYGVAM 112
Query: 155 NVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDS 214
N+ GG HH D G GFC DI++ +Y +++++DLD HQGNG + F +D+
Sbjct: 113 NIAGGTHHAFTDRGEGFCLLNDIAITANYLLENDLSHKILVVDLDVHQGNGTAEIFQNDN 172
Query: 215 RVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIY 274
RV+ M YP E D V + YLK LD L+ +P+ +I+
Sbjct: 173 RVFTFSMHGASNYPMHKEKS---DLDVGLPDKIEDKAYLKILDVHLKSLLQKVEPDFMIF 229
Query: 275 NAGTDILEGDPLGML 289
+G D+LE D LG L
Sbjct: 230 QSGVDVLESDKLGRL 244
>gi|443318867|ref|ZP_21048109.1| deacetylase, histone deacetylase/acetoin utilization protein
[Leptolyngbya sp. PCC 6406]
gi|442781505|gb|ELR91603.1| deacetylase, histone deacetylase/acetoin utilization protein
[Leptolyngbya sp. PCC 6406]
Length = 278
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 87/174 (50%), Gaps = 11/174 (6%)
Query: 126 QRKVLYPFRKQ--------VGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADI 177
QR++ P+ VGGTIL AKLA G A N GG HH D G GFC + D+
Sbjct: 55 QRRIGLPWSPNLVRRTCTAVGGTILTAKLALNYGLACNTAGGTHHAFPDHGAGFCIFNDL 114
Query: 178 SLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFI 237
++ Q + R++I+DLD HQG+G F D RV M +PR ++
Sbjct: 115 AIAARILLDQNLVQRILIVDLDVHQGDGTAWIFRDDPRVVTFSMHCAVNFPR---LKQIS 171
Query: 238 DQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
D+ V + G +YL++L L P+LV+Y+AG D +GD LG L +
Sbjct: 172 DRDVPLPEGLGDEDYLRQLQTHLPDLLSQVRPDLVLYDAGVDTHQGDRLGKLAM 225
>gi|157962481|ref|YP_001502515.1| histone deacetylase superfamily protein [Shewanella pealeana ATCC
700345]
gi|157847481|gb|ABV87980.1| histone deacetylase superfamily [Shewanella pealeana ATCC 700345]
Length = 304
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 125/259 (48%), Gaps = 15/259 (5%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+PLIY Y S L + LH F SK+ + ++L +G ++ + P +AS E L +H
Sbjct: 2 VPLIYDASY--SKLALPPLHRFPISKYRALYEYLLEQGIAEQPQFIAPTKASIEYLTALH 59
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
+SY+K S S ++ FP LV+R LY V GT L + A G
Sbjct: 60 DQSYVKDFISGELDSKLMRRIG---FPWSKALVER-TLYS----VAGTALTCEQAITHGC 111
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
AI++ GG+HH G G+C + D+ L + +I V+I D D HQG+G S
Sbjct: 112 AIHLSGGYHHAHQQFGSGYCIFNDLVLAAVNSQQIDDIETVLIFDCDVHQGDGTATIAQS 171
Query: 213 DSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELV 272
+ V + +P ++ D +E+ GT+ EY++ +++ L P+L+
Sbjct: 172 LNHVITCSIHCHQNFP---ARKQQSDYDIELDKGTSDIEYVETVEQTLAYLIRLHKPDLI 228
Query: 273 IYNAGTDILEGDPLGMLKV 291
IY+AG DI D LG L +
Sbjct: 229 IYDAGVDIHSDDNLGYLNI 247
>gi|443321291|ref|ZP_21050349.1| deacetylase, histone deacetylase/acetoin utilization protein
[Gloeocapsa sp. PCC 73106]
gi|442788980|gb|ELR98655.1| deacetylase, histone deacetylase/acetoin utilization protein
[Gloeocapsa sp. PCC 73106]
Length = 303
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 120/264 (45%), Gaps = 22/264 (8%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LPL+Y PDY + + + H F SK+ ++ + L ++ D+N P +E L +
Sbjct: 1 MNLPLVYHPDYVVP---LPQGHRFPMSKFKQLYELLLAQEITDRNSTYTPEMPKREWLQL 57
Query: 93 VHSESYLK-----SLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLA 147
VH+ Y++ +L + I + + + C+ V GT+L A+LA
Sbjct: 58 VHTNDYVEAYCNGTLDAKSVRRIGLPCSEMLIKRTCIA-----------VAGTVLTAQLA 106
Query: 148 KERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHE 207
+ G N GG HH G GFC + D+++ Q + +++I+DLD HQG+G
Sbjct: 107 LKLGICCNCAGGTHHAFPSFGSGFCIFNDLAIASQVLLQQKLVKKILIVDLDVHQGDGTA 166
Query: 208 KDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTF 267
F + V+ M +P + D + + G YL+ L ++L
Sbjct: 167 FIFQDNPAVFTFSMHCEANFPSHKQQS---DLDIPLPIGLDDEGYLQILAQSLPDLLSEV 223
Query: 268 DPELVIYNAGTDILEGDPLGMLKV 291
P+LV+Y+AG DI D LG L +
Sbjct: 224 KPDLVLYDAGVDIHVNDALGKLAL 247
>gi|440740501|ref|ZP_20919983.1| putative histone deacetylase family protein [Pseudomonas
fluorescens BRIP34879]
gi|447918449|ref|YP_007399017.1| putative histone deacetylase family protein [Pseudomonas poae
RE*1-1-14]
gi|440376317|gb|ELQ12992.1| putative histone deacetylase family protein [Pseudomonas
fluorescens BRIP34879]
gi|445202312|gb|AGE27521.1| putative histone deacetylase family protein [Pseudomonas poae
RE*1-1-14]
Length = 306
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 121/261 (46%), Gaps = 20/261 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L S G + + ++ P + L + H
Sbjct: 3 LPLIYHDDYSPEF---PADHRFPMDKFRLLRDHLVSTGLTEDSRLLRPELCPPQILALAH 59
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
Y+ S S + +P + L +R V + VGG++LAA+ A E G
Sbjct: 60 EPGYIARYMSGELSREDQRRLGLP----WSEALARRTV-----RAVGGSLLAAEQALEHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A ++ GG HH D GFC + D+++ HY ++RV+I D D HQG+G +
Sbjct: 111 LACHLAGGTHHAHYDYPAGFCIFNDLAVISHYLLASGRVNRVLIFDCDVHQGDGTARILH 170
Query: 212 SDSRVYILDMFNPGIYPRDYEARRF-IDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPE 270
+ + +P AR+ D + + G +YLK +D+AL + P+
Sbjct: 171 DTPDAITVSLHCEKNFP----ARKAQSDWDIALPMGMGDADYLKVVDDALNYLLPLYQPD 226
Query: 271 LVIYNAGTDILEGDPLGMLKV 291
LV+Y+AG D+ + D LG LK+
Sbjct: 227 LVLYDAGVDVHKDDALGYLKL 247
>gi|395499064|ref|ZP_10430643.1| histone deacetylase family protein [Pseudomonas sp. PAMC 25886]
Length = 306
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 120/261 (45%), Gaps = 20/261 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G + ++ P E L + H
Sbjct: 3 LPLIYHDDYSPEF---PADHRFPMDKFRLLRDHLVESGLTRDSQLLRPELCPAEILALAH 59
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
Y++ S S + +P + L +R V + VGG++LAA+ A E G
Sbjct: 60 EPGYIERYMSGELSREDQRRLGLP----WSEALARRTV-----RAVGGSLLAAEQALEHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A ++ GG HH D GFC + D+++ HY ++RV+I D D HQG+G +
Sbjct: 111 LACHLAGGTHHAHYDYPAGFCIFNDLAVISHYLLASGRVNRVLIFDCDVHQGDGTARILH 170
Query: 212 SDSRVYILDMFNPGIYP-RDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPE 270
+ + +P R E+ D + + G +YLK +D+AL + P+
Sbjct: 171 DTPDAITVSLHCEKNFPARKAES----DWDIPLPMGMGDEDYLKVVDDALNYLLPLYQPD 226
Query: 271 LVIYNAGTDILEGDPLGMLKV 291
LV+Y+AG D+ + D LG LK+
Sbjct: 227 LVLYDAGVDVHKDDALGYLKL 247
>gi|416235331|ref|ZP_11630090.1| histone deacetylase family protein [Moraxella catarrhalis 12P80B1]
gi|326564372|gb|EGE14600.1| histone deacetylase family protein [Moraxella catarrhalis 12P80B1]
Length = 301
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 117/243 (48%), Gaps = 19/243 (7%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F +K+ I + L ++G + ++ + P S++++L H+ Y L++ E
Sbjct: 18 HRFPMAKYDLIPKKLLTDGIITQDNLFHPELLSEQEILSTHTADYWHKLKTGTLTDK--E 75
Query: 114 VPPVAL-FPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFC 172
+ + L L++R+ R T A AK+ G +++V GG HH AD G GFC
Sbjct: 76 IRKIGLPMSASLIKRE-----RYITHATYECALYAKKYGISLSVSGGTHHGFADHGEGFC 130
Query: 173 AYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYE 232
+ D+ + + + R++ +DLD HQGNG+ +++ V++ M YP
Sbjct: 131 VFNDVCVASNLLLARGQAKRILSVDLDVHQGNGNASIMANNPAVFVFSMHGKKNYP---- 186
Query: 233 ARRFI----DQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGM 288
FI D +E+ GT N YL L + L FDP+++ Y AG D+L D LG
Sbjct: 187 ---FIKPPSDLDIELDDGTDDNAYLTILGKTLPKIIREFDPDMLFYQAGVDVLATDKLGK 243
Query: 289 LKV 291
L +
Sbjct: 244 LSL 246
>gi|77461139|ref|YP_350646.1| histone deacetylase superfamily protein [Pseudomonas fluorescens
Pf0-1]
gi|77385142|gb|ABA76655.1| putative histone deacetylase family protein [Pseudomonas
fluorescens Pf0-1]
Length = 306
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 122/261 (46%), Gaps = 20/261 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G ++ P + L + H
Sbjct: 3 LPLIYHEDYSPEF---PADHRFPMDKFRLLRDHLVDSGLTRDEDLLRPELCPADILALAH 59
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
SY++ S S + +P + L +R V + VGG+ILAA+ A E G
Sbjct: 60 DRSYIERYMSGELSREDQRRLGLP----WNEALARRTV-----RAVGGSILAAEKALEHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A ++ GG HH D GFC + D+++ HY ++RV+I D D HQG+G +
Sbjct: 111 LACHLAGGTHHAHYDYPAGFCIFNDLAIISHYLLQSGRVNRVLIFDCDVHQGDGTARILH 170
Query: 212 SDSRVYILDMFNPGIYP-RDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPE 270
+ + + +P R E+ D + + +G +YLK +D+AL + P+
Sbjct: 171 NTPEAITVSLHCEKNFPARKAES----DWDIPLPNGMGDADYLKVVDDALNYLLPLYQPD 226
Query: 271 LVIYNAGTDILEGDPLGMLKV 291
LV+Y+AG D+ + D LG L++
Sbjct: 227 LVLYDAGVDVHKDDALGYLQL 247
>gi|257453627|ref|ZP_05618917.1| histone deacetylase family protein [Enhydrobacter aerosaccus SK60]
gi|257449085|gb|EEV24038.1| histone deacetylase family protein [Enhydrobacter aerosaccus SK60]
Length = 300
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 114/248 (45%), Gaps = 9/248 (3%)
Query: 44 DISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQ 103
DI + + H F K+ I L +EG L + P S++++L H++ Y + L+
Sbjct: 8 DIFKYDVPERHRFPMQKYPMIAARLLAEGTLTQANFFAPQRLSEDEILTTHTQRYWQHLK 67
Query: 104 SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHC 163
+ + P + + +V+ GT A AK+ G A+N+ GG HH
Sbjct: 68 QQTLPAKDARAIGFEMTPRLVERERVI------AHGTYECALFAKQFGVALNIAGGTHHA 121
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
AD G GFC + D+++ + + ++++ +DLD HQGNG +++ RV+ M
Sbjct: 122 FADHGEGFCVFNDVAVASNLLLARGQATQILTVDLDVHQGNGTAHLMANEPRVFTFSMHG 181
Query: 224 PGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEG 283
YP +A D +++ + T YL L + L P+++ Y + D+L
Sbjct: 182 AKNYPFRKQAS---DLDIDLPNETGDEAYLAILMDTLPALITKVKPDMLFYQSAVDVLST 238
Query: 284 DPLGMLKV 291
D LG L +
Sbjct: 239 DKLGKLAL 246
>gi|119468440|ref|ZP_01611531.1| putative histone deacetylase family protein [Alteromonadales
bacterium TW-7]
gi|119447948|gb|EAW29213.1| putative histone deacetylase family protein [Alteromonadales
bacterium TW-7]
Length = 302
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 120/267 (44%), Gaps = 29/267 (10%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPL+Y P+Y SF + H F SK+ + + G + N + +P+ S E L +VH
Sbjct: 7 LPLVYHPNYSFSF---DPKHRFAMSKFANLYTHVKKLGLIGNN-LTQPVLGSPEPLELVH 62
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTILAAKL 146
++Y+ L ++ + A+ R++ P+ Q+ GT+ A+L
Sbjct: 63 CDNYIHDLWNN-------RLDDKAM-------RRIGLPWSAQLMARTFTAPQGTLQTARL 108
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
A + G A ++ GG HH D G G+C D++ ++ V+I DLD HQG+G
Sbjct: 109 ALKHGIACHLAGGTHHAHFDFGSGYCMVNDLAFATQTLINSGEVTNVLIFDLDVHQGDGT 168
Query: 207 EKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHT 266
+ Y + +P A D + + + EYL +D+ L
Sbjct: 169 AAMLAHQPYAYTCSIHCEKNFPFRKSAS---DLDIGLANHMQDVEYLAIVDDTLSYLLKE 225
Query: 267 FDPELVIYNAGTDILEGDPLGMLKVKW 293
+P LV+Y+AG DI + D LG L + W
Sbjct: 226 LNPSLVLYDAGVDIWQNDGLGKLDISW 252
>gi|392538515|ref|ZP_10285652.1| histone deacetylase [Pseudoalteromonas marina mano4]
Length = 302
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 120/267 (44%), Gaps = 29/267 (10%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPL+Y P+Y SF + H F SK+ + + G + N + +P+ S E L +VH
Sbjct: 7 LPLVYHPNYSFSF---DPKHRFAMSKFANLYAHVKKLGLVGNN-LTQPVLGSPEPLELVH 62
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTILAAKL 146
++Y+ L ++ + A+ R++ P+ Q+ GT+ A+L
Sbjct: 63 CDNYIHDLWNN-------RLDDKAM-------RRIGLPWSAQLMARTFTAPQGTLQTARL 108
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
A + G A ++ GG HH D G G+C D++ ++ V+I DLD HQG+G
Sbjct: 109 ALKHGIACHLAGGTHHAHFDFGSGYCMVNDLAFTTQTLINSGEVTNVLIFDLDVHQGDGT 168
Query: 207 EKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHT 266
+ Y + +P A D + + + EYL +D+ L
Sbjct: 169 AAMLAHQPYAYTCSIHCEKNFPFRKSAS---DLDIGLANHMQDAEYLAIVDDTLSYLLKE 225
Query: 267 FDPELVIYNAGTDILEGDPLGMLKVKW 293
+P LV+Y+AG DI + D LG L + W
Sbjct: 226 LNPSLVLYDAGVDIWQNDGLGKLDISW 252
>gi|424842887|ref|ZP_18267512.1| deacetylase, histone deacetylase/acetoin utilization protein
[Saprospira grandis DSM 2844]
gi|395321085|gb|EJF54006.1| deacetylase, histone deacetylase/acetoin utilization protein
[Saprospira grandis DSM 2844]
Length = 300
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 121/258 (46%), Gaps = 18/258 (6%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
L + +SP Y + + H F K+ + Q L EG L++ +P ++E +L H
Sbjct: 2 LKVAFSPIYRYE---LPQGHRFPMIKYDLLAQQLIYEGCLEEENFFQPQPIAEEWILRTH 58
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNC--LVQR-KVLYPFRKQVGGTILAAKLAKERG 151
S+ Y +L+ +I + FP LVQR KV+ GTI A+E G
Sbjct: 59 SKDYWDALKEQ---TISAKAARKIGFPMSEKLVQRSKVI------AQGTIDCCLAAQEYG 109
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
++N+ GG HH A G GFC D ++ +Y Q +++I+DLD HQGNG K F
Sbjct: 110 VSLNIAGGTHHAYASHGEGFCLLNDFAIAANYLLDQGLAQQILIVDLDVHQGNGSAKIFE 169
Query: 212 SDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPEL 271
++ RV+ M YP E D + + YL+ L + L + P++
Sbjct: 170 NEPRVFTFSMHAAANYPFRKERS---DLDIALPDLMDDGPYLQVLADCLPALLESLRPDM 226
Query: 272 VIYNAGTDILEGDPLGML 289
V+Y +G D+L D LG L
Sbjct: 227 VLYLSGVDVLASDKLGRL 244
>gi|416247314|ref|ZP_11635620.1| histone deacetylase family protein [Moraxella catarrhalis BC8]
gi|326569907|gb|EGE19957.1| histone deacetylase family protein [Moraxella catarrhalis BC8]
Length = 301
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 118/239 (49%), Gaps = 11/239 (4%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F +K+ I + L ++G + ++ + P S++++L H+ Y L++ E
Sbjct: 18 HRFPMAKYDLIPKKLLTDGIITQDNLFHPELLSEQEILSTHTADYWHKLKTGTLTDK--E 75
Query: 114 VPPVAL-FPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFC 172
+ + L L++R+ R T A AK+ G +++V GG HH AD G GFC
Sbjct: 76 IRKIGLPMSASLIKRE-----RYITHATYECALYAKKYGISLSVSGGTHHGFADHGEGFC 130
Query: 173 AYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYE 232
+ D+ + + + R++ +DLD HQGNG+ +++ V++ + YP Y+
Sbjct: 131 VFNDVCVASNLLLARGQAKRILSVDLDVHQGNGNASIMANNPAVFVFSIHGKKNYPF-YK 189
Query: 233 ARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+D +E+ GT N YL L E L FDP+++ Y AG D+L D LG L +
Sbjct: 190 PPSDLD--IELDDGTDDNAYLTILSETLPKIIREFDPDMLFYQAGVDVLATDKLGKLSL 246
>gi|300691346|ref|YP_003752341.1| histone deacetylase [Ralstonia solanacearum PSI07]
gi|299078406|emb|CBJ51057.2| Histone deacetylase [Ralstonia solanacearum PSI07]
Length = 324
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 105/220 (47%), Gaps = 23/220 (10%)
Query: 81 EPLEASKEDLLVVHSESYLKSLQSS---PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV 137
E A + LL+VH+ Y+ ++ + P I P + +V+R R+
Sbjct: 44 EAPRAGDDALLLVHAPDYVSAVGAGRLDPARQREIGFP----WSLAMVERS-----RRSA 94
Query: 138 GGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISR----- 192
G T+ A + A G A+N+ GG HH AD+GGGFC + D ++ + +Q R
Sbjct: 95 GATMAACEAAMTDGIAVNLAGGTHHAYADKGGGFCVFNDAAIASRW--IQRRPGRTPDGF 152
Query: 193 -VMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNE 251
V I+DLD HQGNG +D+ V+ L + YP EA D V + G
Sbjct: 153 PVAIVDLDVHQGNGTASILRNDASVFTLSVHGEKNYPFRKEAS---DLDVGLPDGCGDEA 209
Query: 252 YLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
YL+ L AL+ F P L+IY AG D EGD LG LK+
Sbjct: 210 YLEALAGALDTLAARFAPRLIIYLAGADPHEGDRLGRLKL 249
>gi|241663209|ref|YP_002981569.1| histone deacetylase superfamily protein [Ralstonia pickettii 12D]
gi|240865236|gb|ACS62897.1| histone deacetylase superfamily [Ralstonia pickettii 12D]
Length = 335
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 91/180 (50%), Gaps = 19/180 (10%)
Query: 126 QRKVLYPF--------RKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADI 177
QR++ +P+ R+ G T+ A A G A+N+ GG HH AD+GGGFC + D
Sbjct: 88 QREIGFPWSPEMVERSRRSAGATMAACDAALADGIAVNLAGGTHHAYADKGGGFCVFNDA 147
Query: 178 SLCIHYAFVQLNISR------VMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDY 231
++ + +Q R V I+DLD HQGNG D+ V+ L + YP
Sbjct: 148 AIASRW--IQRQSGRTPGDFPVAIVDLDVHQGNGTASILRDDATVFTLSLHGEKNYPFRK 205
Query: 232 EARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
EA D V + G +YL+ L AL++ F P+L+IY AG D EGD LG LK+
Sbjct: 206 EAS---DLDVGLHDGCGDEDYLQALTGALDILAGRFKPQLIIYLAGADPHEGDRLGRLKL 262
>gi|119510696|ref|ZP_01629824.1| histone deacetylase/AcuC/AphA family protein [Nodularia spumigena
CCY9414]
gi|119464650|gb|EAW45559.1| histone deacetylase/AcuC/AphA family protein [Nodularia spumigena
CCY9414]
Length = 305
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 117/262 (44%), Gaps = 18/262 (6%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
+LP+IY PDY + H F SK+ ++ + L +EG P E + +
Sbjct: 1 MELPIIYHPDY---IAPLPPGHRFPMSKFEKLYELLLAEGVAQTAQFHTPKRPPPELIEL 57
Query: 93 VHSESYLKSLQSS---PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
VH+ Y+K+ P I +P + LV R + VGGTIL A++A
Sbjct: 58 VHTSEYVKAYCEGTLEPKAQRRIGLP----WSPELVNRTCV-----AVGGTILTAQMALS 108
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKD 209
+G A N GG HH G GFC + D+++ + ++I+DLD HQG+G
Sbjct: 109 QGLACNTAGGTHHAFPSYGSGFCIFNDLAIACRVLQKLGLVQNILIVDLDVHQGDGTAVI 168
Query: 210 FSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDP 269
F D V+ M +P ++ D V + G + YL+ L L P
Sbjct: 169 FQGDDSVFTFSMHCEVNFP---GTKQTSDLDVPLTVGMEDDAYLQTLANYLPDLLSHIQP 225
Query: 270 ELVIYNAGTDILEGDPLGMLKV 291
+LV+Y+AG D GD LG L +
Sbjct: 226 DLVLYDAGVDPHIGDRLGKLAL 247
>gi|441495684|ref|ZP_20977924.1| Deacetylase [Fulvivirga imtechensis AK7]
gi|441440649|gb|ELR73901.1| Deacetylase [Fulvivirga imtechensis AK7]
Length = 300
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 111/246 (45%), Gaps = 25/246 (10%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ + + L EG + + +P ++ +L H +Y + L+ I
Sbjct: 18 HRFPMEKYELLPEQLLYEGTISTSNFFDPGLPTEAMVLRTHESAYWEKLRDQKLSRSEI- 76
Query: 114 VPPVALFPNCLVQRKVLYPFRKQ--------VGGTILAAKLAKERGWAINVGGGFHHCSA 165
R+ +P +Q V GT L A+ A G ++N+ GG HH
Sbjct: 77 -------------RRTGFPLSRQLVDREMTIVHGTTLCARYALTHGVSMNIAGGTHHAFT 123
Query: 166 DEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
+ G GFC D+++ H+ Q +++I+DLD HQGNG + F +D+RV+ M
Sbjct: 124 NRGEGFCLLNDMAVAAHFLLDQQLAGKILIVDLDVHQGNGTAQIFRNDARVFTFSMHGAR 183
Query: 226 IYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDP 285
YP E D + + G + YLK L+ L+ H +P+ + + +G DIL D
Sbjct: 184 NYPMQKEIS---DLDIGLPDGADDHFYLKILEVNLKNLLHEVEPDFIFFQSGVDILATDK 240
Query: 286 LGMLKV 291
LG L +
Sbjct: 241 LGRLAI 246
>gi|159469207|ref|XP_001692759.1| histone deacetylase [Chlamydomonas reinhardtii]
gi|158278012|gb|EDP03778.1| histone deacetylase [Chlamydomonas reinhardtii]
Length = 278
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 122/259 (47%), Gaps = 14/259 (5%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSK-WGRICQFLSSEGFLDKNCI-VEPLEASKEDLLV 92
LP++Y PDY + P S+ + RI + + EG + I V P E+LL+
Sbjct: 1 LPVVYHPDYSAPVMPPGHRFPMASTAVFRRIYELVLEEGIAAPHQIHVPPRLPPDEELLL 60
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
VH YL +L SS + V + P V+R + +V GT+L A+LA G
Sbjct: 61 VHDPDYL-ALFSSGRLDEE-RVRRIGFGPA--VRRT-----KAEVAGTLLTARLALSGGL 111
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
A+N GG HH G G+C D+++ + + RV+++DLD HQG+G F
Sbjct: 112 AVNTAGGTHHAFPSHGSGYCILNDLAVTAEVLLAEGAVRRVLVLDLDVHQGDGTAFIFRD 171
Query: 213 DSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELV 272
V+ L + +P + R +D + + GT YL ++ E L F P+LV
Sbjct: 172 RPDVFTLSVHAASNFPARKQ-RSTLD--IALPDGTPDAVYLARVAEILPAVLRDFKPDLV 228
Query: 273 IYNAGTDILEGDPLGMLKV 291
+Y+AG D D LG L +
Sbjct: 229 LYDAGVDPHVDDALGRLAL 247
>gi|17230842|ref|NP_487390.1| histone deacetylase/AcuC/AphA family protein [Nostoc sp. PCC 7120]
gi|17132445|dbj|BAB75049.1| histone deacetylase/AcuC/AphA family protein [Nostoc sp. PCC 7120]
Length = 305
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 117/264 (44%), Gaps = 22/264 (8%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
+LP+IY PDY + + H F +K+ ++ + L S+ P E + +
Sbjct: 1 MELPIIYHPDY---VAPLPEGHRFPMAKFKKLYELLLSDDVAQTEQFYTPTLPPLELIEL 57
Query: 93 VHSESYLKS-----LQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLA 147
VH+ Y++S L + I + P C+ VGGTIL A+LA
Sbjct: 58 VHTPDYVRSYCEGTLDTKAQRRIGLPWSPALANRTCIA-----------VGGTILTAQLA 106
Query: 148 KERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHE 207
+G A N GG HH G GFC + D+++ Q + +++I+DLD HQG+G
Sbjct: 107 LSQGLACNTAGGTHHAFPSYGSGFCIFNDLAIASRVLQQQQIVQKILIVDLDVHQGDGTA 166
Query: 208 KDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTF 267
F D V+ M +P ++ D V + G + YL+ L L
Sbjct: 167 FIFQDDDSVFTFSMHCEINFP---GTKQHSDLDVPLPVGMEDDAYLQTLASYLPDLLSEI 223
Query: 268 DPELVIYNAGTDILEGDPLGMLKV 291
P+LV+Y+AG D GD LG L +
Sbjct: 224 KPDLVLYDAGVDPHIGDRLGKLAL 247
>gi|398996125|ref|ZP_10698987.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM21]
gi|398127661|gb|EJM17067.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM21]
Length = 325
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 122/264 (46%), Gaps = 20/264 (7%)
Query: 32 IFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLL 91
I LPLIY DY F H F K+ + L G ++ P + L
Sbjct: 19 IMPLPLIYHEDYSPEF---PADHRFPMDKFRLLRDHLVDSGLTRDADLLRPELCPAQILA 75
Query: 92 VVHSESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAK 148
+ H +Y++ S S + +P + L +R V + VGG++LAA+ A
Sbjct: 76 LAHDAAYIERYMSGELSREDQRRLGLP----WSEALARRTV-----RAVGGSLLAAEQAL 126
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEK 208
E G A ++ GG HH D GFC + D+++ HY ++RV+I D D HQG+G +
Sbjct: 127 EHGLACHLAGGTHHAHYDYPAGFCIFNDLAVISHYLLESGRVNRVLIFDCDVHQGDGTAR 186
Query: 209 DFSSDSRVYILDMFNPGIYP-RDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTF 267
+ + + +P R E+ D + + G +YLK +D+AL +
Sbjct: 187 ILHNTPDAVTVSLHCEKNFPARKAES----DWDIPLPKGMGDADYLKVVDDALNYLLPLY 242
Query: 268 DPELVIYNAGTDILEGDPLGMLKV 291
P+LV+Y+AG D+ + D LG LK+
Sbjct: 243 QPDLVLYDAGVDVHKDDALGYLKL 266
>gi|423687680|ref|ZP_17662483.1| deacetylase [Vibrio fischeri SR5]
gi|371493463|gb|EHN69066.1| deacetylase [Vibrio fischeri SR5]
Length = 298
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 123/264 (46%), Gaps = 25/264 (9%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
L LIY P Y S L + H + K+ R+ Q + S + EP+ S E + VH
Sbjct: 2 LALIYHPIY--SQLALPDGHRYPIQKYQRLYQAIQSHYSDEVYRCFEPIPLSIEAIKQVH 59
Query: 95 SESYLKSLQSSPNVSIIIEVPPVAL----FP--NCLVQRKVLYPFRKQVGGTILAAKLAK 148
E+Y+ +L + +P + FP L+ R +L GT L A
Sbjct: 60 EENYVNALVTG-------TLPAAKMRRIGFPWSESLIGRTLL-----SASGTCLTVDKAL 107
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEK 208
E G AI++ GG+HH D G GFC D+ + H+ + +I +V+IID D H G+G
Sbjct: 108 ENGSAIHLSGGYHHAHYDFGSGFCLVNDLVIAAHHGLSKDSIDKVLIIDSDVHHGDGTAT 167
Query: 209 DFSSDSRVYILDMFNPGIYPRDYEARR-FIDQKVEVVSGTTTNEYLKKLDEALEVAGHTF 267
+ + L +P AR+ D V + GT NE+L+ + +E+A +
Sbjct: 168 LCADRGDIITLSFHCDKNFP----ARKPMSDYDVPLPVGTQDNEFLEAFKQIVEMAINHH 223
Query: 268 DPELVIYNAGTDILEGDPLGMLKV 291
P+L+IY+AG DI D LG L V
Sbjct: 224 QPDLIIYDAGVDIHIDDELGYLSV 247
>gi|421497632|ref|ZP_15944790.1| histone deacetylase/AcuC/AphA family protein [Aeromonas media WS]
gi|407183367|gb|EKE57266.1| histone deacetylase/AcuC/AphA family protein [Aeromonas media WS]
Length = 298
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 122/259 (47%), Gaps = 15/259 (5%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
L + Y P Y S L + + H F +K+ I Q L++ G+ + E AS+E +
Sbjct: 1 MSLRIFYHPYY--SSLTLPERHRFPLAKYQAIYQHLAALGY----PLAEAPAASREQIAR 54
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
VH Y+++ + I P L++R + + VG T+ A++ A E+G
Sbjct: 55 VHDADYVEAALTGQLEREAIRRLGFPWSP-MLIERTL-----RSVGATVAASRHALEQGC 108
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
+ + GG+HH D G GFC + D+ + + + +V+I+DLD HQG+G +
Sbjct: 109 GLQISGGYHHAHRDFGSGFCLFNDLVIAARACLDEGSCEQVLIVDLDVHQGDGSAALCTG 168
Query: 213 DSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELV 272
+ L + +P A + SG + YL+ L +AL +A + P+L+
Sbjct: 169 SQDIITLSLHGEHNFPHHKPASHL---DFALPSGMEDDAYLETLSQALNLALRLYHPDLI 225
Query: 273 IYNAGTDILEGDPLGMLKV 291
+Y AG D+ + D LG L +
Sbjct: 226 LYQAGVDVHQADELGYLSL 244
>gi|408674651|ref|YP_006874399.1| histone deacetylase superfamily [Emticicia oligotrophica DSM 17448]
gi|387856275|gb|AFK04372.1| histone deacetylase superfamily [Emticicia oligotrophica DSM 17448]
Length = 300
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 111/240 (46%), Gaps = 13/240 (5%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ I + L EG + P K +L VH+E Y L N+SI +
Sbjct: 18 HRFPMMKYELIPEQLLYEGTCTEENFFSPTVVDKRWVLGVHNEQYFNDLL---NLSIDPK 74
Query: 114 VPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGF 171
+ FP LV+R+++ GTI A + G ++N+ GG HH +D+G GF
Sbjct: 75 MERRIGFPISEMLVKRELII-----TQGTIDCCHYALQYGISMNIAGGTHHAYSDKGEGF 129
Query: 172 CAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDY 231
C D+++ +Y + +V++IDLD HQGNG + F + RV+ M YP
Sbjct: 130 CLLNDVAVAANYLLENQIVKKVLVIDLDVHQGNGTAEIFQQEPRVFTFSMHGKENYPLKK 189
Query: 232 EARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
E D +E+ + +YL L + L PE + Y +G DIL D LG L V
Sbjct: 190 EIS---DLDIELPTYCKDEDYLNILYDTLPRLIEVEKPEFLFYISGVDILASDKLGKLSV 246
>gi|186686128|ref|YP_001869324.1| histone deacetylase superfamily protein [Nostoc punctiforme PCC
73102]
gi|186468580|gb|ACC84381.1| histone deacetylase superfamily [Nostoc punctiforme PCC 73102]
Length = 305
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 119/260 (45%), Gaps = 18/260 (6%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LP+IY PDY + + H F SK+ ++ + L ++G ++ P E + +VH
Sbjct: 3 LPIIYHPDY---IAPLPEGHRFPMSKFRQLYELLLADGVANQEQFHTPERPPPELIELVH 59
Query: 95 SESYLKSLQSS---PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
+ SY+++ P + I +P + L R + VGGTIL AKLA G
Sbjct: 60 TPSYVQAYCEGTLDPKLQRRIGLP----WSPALANRTCV-----AVGGTILTAKLALSHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A N GG HH G GFC + D+++ + +++I+DLD HQG+G F
Sbjct: 111 LACNTAGGTHHAFPSYGSGFCIFNDLAIACRVLQKFGLVQKILIVDLDVHQGDGTAFIFQ 170
Query: 212 SDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPEL 271
D V+ M +P ++ D V + G + YL+ L L P+L
Sbjct: 171 DDDSVFTFSMHCEVNFP---GTKQNSDLDVPLPVGMEDDAYLQTLANYLSDLLSKVKPDL 227
Query: 272 VIYNAGTDILEGDPLGMLKV 291
V Y+AG D GD LG L +
Sbjct: 228 VFYDAGVDPHIGDRLGKLAL 247
>gi|427702729|ref|YP_007045951.1| deacetylase [Cyanobium gracile PCC 6307]
gi|427345897|gb|AFY28610.1| deacetylase, histone deacetylase/acetoin utilization protein
[Cyanobium gracile PCC 6307]
Length = 321
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 116/259 (44%), Gaps = 18/259 (6%)
Query: 36 PLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHS 95
PL+Y P Y + + H F K+ + + L I +PL A + L +VH
Sbjct: 4 PLVYHPAYAVP---LPSGHRFPMQKFRLLKERLEQLELARPGQIHQPLPAPRRWLELVHG 60
Query: 96 ESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
Y ++ +P I +P LV+R L VGGT+L A+LA G
Sbjct: 61 RGYHEAFSRGLLTPQEVRRIGLP----VSEPLVRRSWL-----AVGGTVLTARLALRHGL 111
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
A ++ GG HH G GFC + D ++ + + +V+++DLD HQG+G F+
Sbjct: 112 ACHLAGGTHHAFPLHGSGFCIFNDCAVAARVLLAEGLVRQVLVVDLDVHQGDGTAAIFTG 171
Query: 213 DSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELV 272
D RV+ M +P + D + + G + YL+ L+ L P+LV
Sbjct: 172 DPRVFSFSMHAASNFPLHKQTG---DLDLALEDGVGDDAYLRTLERTLPDLLDQVRPDLV 228
Query: 273 IYNAGTDILEGDPLGMLKV 291
+YNAG D D LG L++
Sbjct: 229 LYNAGVDPHRDDRLGRLEL 247
>gi|217973889|ref|YP_002358640.1| histone deacetylase superfamily protein [Shewanella baltica OS223]
gi|217499024|gb|ACK47217.1| histone deacetylase superfamily [Shewanella baltica OS223]
Length = 302
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 118/263 (44%), Gaps = 23/263 (8%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+PL+Y Y S L + H F ++K+ + Q+L P + +D++ VH
Sbjct: 4 IPLVYHASY--SKLALPPHHRFPTTKYANLRQYLLENQLATPAQFHTPTAMTVQDVMQVH 61
Query: 95 SESYLKSLQSSPNVSIIIEVPPVAL----FP--NCLVQRKVLYPFRKQVGGTILAAKLAK 148
Y++ I +P AL FP LV+R + V GT L A LA
Sbjct: 62 QREYVEQF-------IAGTLPTAALRRIGFPWSEALVERTL-----HSVAGTTLTASLAI 109
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEK 208
+G +++ GG+HH D G G+C + D+ L A + +V+I D D HQG+G
Sbjct: 110 NQGIGLHLTGGYHHAHYDFGSGYCIFNDLILAAKNAIASQQVHKVLIFDCDVHQGDGSAT 169
Query: 209 DFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFD 268
+ + +P ++ +E+ G+ N YL+ +++ L +
Sbjct: 170 LSQRHQGIISCSIHCKENFP---SRKQHSHHDIELTKGSDDNLYLETVEQTLALLIRIHQ 226
Query: 269 PELVIYNAGTDILEGDPLGMLKV 291
P+L++Y+AG DI D LG+L +
Sbjct: 227 PDLILYDAGVDIHPNDDLGLLNI 249
>gi|332878787|ref|ZP_08446502.1| histone deacetylase family protein [Capnocytophaga sp. oral taxon
329 str. F0087]
gi|332683138|gb|EGJ56020.1| histone deacetylase family protein [Capnocytophaga sp. oral taxon
329 str. F0087]
Length = 276
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/238 (32%), Positives = 105/238 (44%), Gaps = 18/238 (7%)
Query: 59 SKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS---LQSSPNVSIIIEVP 115
K+ + Q L EG D P + S E L + H+ Y+ LQ S E
Sbjct: 2 QKYALLPQQLLHEGIADPADFRTPSKVSLETLCLAHTPDYVHKFVHLQLSHK-----EAL 56
Query: 116 PVALFPNC-LVQRKVLYPFRKQVGGTILAAKLA-KERGWAINVGGGFHHCSADEGGGFCA 173
P+ N LV R++ V GTI AA A + N+ GG HH +D G GFC
Sbjct: 57 PIGFVQNQQLVDRELTL-----VQGTIEAALWALRTAEVGFNIAGGTHHAFSDRGEGFCM 111
Query: 174 YADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEA 233
D ++ Y + +V+IIDLD HQGNG + F D RV+ M G YP E
Sbjct: 112 LNDQAVAAAYLLAHTAVRKVLIIDLDVHQGNGTAEIFRHDPRVFTFSMHAEGNYPFVKEQ 171
Query: 234 RRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
D+ + + +GTT YL L L P+ V Y +G D+L D LG L +
Sbjct: 172 S---DRDIALPTGTTDAAYLSVLTSVLPEIITAHQPDFVFYQSGVDVLSSDKLGKLSL 226
>gi|336311111|ref|ZP_08566078.1| histone deacetylase/AcuC/AphA family protein [Shewanella sp. HN-41]
gi|335865327|gb|EGM70353.1| histone deacetylase/AcuC/AphA family protein [Shewanella sp. HN-41]
Length = 302
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 121/263 (46%), Gaps = 23/263 (8%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+PL+Y Y S L + H F ++K+ + Q+L P+ + +D++ VH
Sbjct: 4 IPLVYHASY--SKLALPSHHKFPTTKYANLRQYLFDNQLATPAQFHAPIAMTAQDVMQVH 61
Query: 95 SESYLKSLQSSPNVSIIIEVPPVAL----FP--NCLVQRKVLYPFRKQVGGTILAAKLAK 148
+ Y++ I +P +AL FP LV+R + V GT L A LA
Sbjct: 62 QKEYVEQF-------ITGTLPTMALRRIGFPWSEALVERTL-----HSVAGTTLTASLAI 109
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEK 208
E G ++++ GG+HH D G G+C + D+ + + V+I D D HQG+G
Sbjct: 110 EHGISLHLTGGYHHAHYDFGSGYCIFNDLIIAAQKVIAAKQLHSVLIFDCDVHQGDGSAT 169
Query: 209 DFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFD 268
+ + + +P ++ + +E+ G Y++ +++ L +
Sbjct: 170 LSHRHNGIISCSIHCKENFPSRKQSSHY---DIELSKGVDDKAYIETVEQTLALLIRIHQ 226
Query: 269 PELVIYNAGTDILEGDPLGMLKV 291
P+L++Y+AG DI + D LG+L +
Sbjct: 227 PDLILYDAGVDIHQNDDLGLLNI 249
>gi|399000980|ref|ZP_10703700.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM18]
gi|398128735|gb|EJM18117.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM18]
Length = 306
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 121/261 (46%), Gaps = 20/261 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G ++ P + L + H
Sbjct: 3 LPLIYHEDYSPEF---PAEHRFPMDKFRLLRDHLVDSGLTRDTDLLRPDLCPADILALAH 59
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
+Y++ S S + +P + L +R V + VGG++LAA+ A E G
Sbjct: 60 DPAYIERYMSGELSREDQRRLGLP----WSEALARRTV-----RAVGGSLLAAEQALEHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A ++ GG HH D GFC + D+++ HY ++RV+I D D HQG+G +
Sbjct: 111 LACHLAGGTHHAHYDHPAGFCIFNDLAVISHYLLESGRVNRVLIFDCDVHQGDGTARILH 170
Query: 212 SDSRVYILDMFNPGIYP-RDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPE 270
+ + + +P R E+ D + + G +YLK +D+AL + P+
Sbjct: 171 NTPEAVTVSLHCEKNFPARKAES----DWDIPLPMGMGDADYLKVVDDALNYLLPLYQPD 226
Query: 271 LVIYNAGTDILEGDPLGMLKV 291
LV+Y+AG D+ + D LG LK+
Sbjct: 227 LVLYDAGVDVHKDDALGYLKL 247
>gi|389681767|ref|ZP_10173111.1| histone deacetylase family protein [Pseudomonas chlororaphis O6]
gi|388554302|gb|EIM17551.1| histone deacetylase family protein [Pseudomonas chlororaphis O6]
Length = 306
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 119/261 (45%), Gaps = 20/261 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G ++ P KE L + H
Sbjct: 3 LPLIYHDDYSPEF---PAEHRFPMDKFRLLRDHLVDSGLTRDADLMRPELCPKEILALAH 59
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
Y++ + S + +P + L +R V + VGG++LAA+ A E G
Sbjct: 60 DPGYIERYMAGELSREDQRRLGLP----WNEALARRTV-----RAVGGSLLAAEQALEHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A ++ GG HH D GFC + D+++ HY + RV+I D D HQG+G +
Sbjct: 111 LACHLAGGTHHAHYDHPAGFCIFNDLAVISHYLLEAGRVGRVLIFDCDVHQGDGTARILE 170
Query: 212 SDSRVYILDMFNPGIYPRDYEARRFI-DQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPE 270
+ + +P AR+ D + + G +YLK +D+AL + P+
Sbjct: 171 HTPDAVTVSLHCEKNFP----ARKATSDWDIPLPMGMGDADYLKVVDDALNYLLPLYQPD 226
Query: 271 LVIYNAGTDILEGDPLGMLKV 291
LV+Y+AG D+ + D LG LK+
Sbjct: 227 LVLYDAGVDVHKDDALGYLKL 247
>gi|425901732|ref|ZP_18878323.1| histone deacetylase family protein [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|397892988|gb|EJL09464.1| histone deacetylase family protein [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
Length = 306
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 119/261 (45%), Gaps = 20/261 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G ++ P +E L + H
Sbjct: 3 LPLIYHEDYSPEF---PAEHRFPMDKFRLLRDHLVDSGLTRDADLLRPELCPREILALAH 59
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
Y++ + S + +P + L +R V + VGG++LAA+ A E G
Sbjct: 60 DPGYIERYMAGELSREDQRRLGLP----WNEALARRTV-----RAVGGSLLAAEQALEHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A ++ GG HH D GFC + D+++ HY + RV+I D D HQG+G +
Sbjct: 111 LACHLAGGTHHAHYDHPAGFCIFNDLAVISHYLLEAGRVGRVLIFDCDVHQGDGTARILE 170
Query: 212 SDSRVYILDMFNPGIYPRDYEARRFI-DQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPE 270
+ + +P AR+ D + + G +YLK +D+AL + P+
Sbjct: 171 HTPDAVTVSLHCEKNFP----ARKATSDWDIPLPMGMGDTDYLKVVDDALNYLLPLYQPD 226
Query: 271 LVIYNAGTDILEGDPLGMLKV 291
LV+Y+AG D+ + D LG LK+
Sbjct: 227 LVLYDAGVDVHKDDALGYLKL 247
>gi|379729191|ref|YP_005321387.1| histone deacetylase [Saprospira grandis str. Lewin]
gi|378574802|gb|AFC23803.1| histone deacetylase [Saprospira grandis str. Lewin]
Length = 300
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 120/258 (46%), Gaps = 18/258 (6%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
L + +SP Y + + H F K+ + Q L EG L++ P ++E +L H
Sbjct: 2 LKVAFSPIYRYE---LPQGHRFPMIKYDLLAQQLIYEGCLEEENFFHPQPIAEEWILRTH 58
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNC--LVQR-KVLYPFRKQVGGTILAAKLAKERG 151
S+ Y SL+ +I + FP LVQR KV+ GTI A+E G
Sbjct: 59 SKDYWDSLKKQ---TISAKAARKIGFPMSEKLVQRSKVI------AQGTIDCCLAAQEYG 109
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
++N+ GG HH A G GFC D ++ +Y Q +++I+DLD HQGNG K F
Sbjct: 110 VSLNIAGGTHHAYASHGEGFCLLNDFAIAANYLLDQGLAQQILIVDLDVHQGNGSAKIFE 169
Query: 212 SDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPEL 271
++ RV+ M YP E D + + YL+ L + L + P++
Sbjct: 170 NEPRVFTFSMHAAANYPFRKERS---DLDIALPDLMDDGPYLQVLADYLPALLESLRPDI 226
Query: 272 VIYNAGTDILEGDPLGML 289
V+Y +G D+L D LG L
Sbjct: 227 VLYLSGVDVLASDKLGRL 244
>gi|398896408|ref|ZP_10647537.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM55]
gi|398178668|gb|EJM66313.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM55]
Length = 306
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 122/263 (46%), Gaps = 20/263 (7%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LPLIY DY F H F K+ + L G ++ P + L +
Sbjct: 1 MSLPLIYHEDYSPEF---PADHRFPMDKFRLLRDHLVDSGLTRDADLLRPDLCPADILAL 57
Query: 93 VHSESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
H SY++ S S + +P + L +R V + VGG++LAA+ A E
Sbjct: 58 AHDPSYIERYMSGELSREDQRRLGLP----WSEALARRTV-----RAVGGSLLAAEQALE 108
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKD 209
G A ++ GG HH D GFC + D+++ HY ++RV+I D D HQG+G +
Sbjct: 109 HGLACHLAGGTHHAHYDYPAGFCIFNDLAVISHYLLESGRVNRVLIFDCDVHQGDGTARI 168
Query: 210 FSSDSRVYILDMFNPGIYP-RDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFD 268
+ + + +P R E+ D + + +G +YLK +D+AL +
Sbjct: 169 LHNTPEAVTVSLHCEKNFPARKAES----DWDIPLPNGMGDADYLKVVDDALNYLLPLYQ 224
Query: 269 PELVIYNAGTDILEGDPLGMLKV 291
P+LV+Y+AG D+ + D LG LK+
Sbjct: 225 PDLVLYDAGVDVHKDDALGYLKL 247
>gi|384252722|gb|EIE26198.1| histone deacetylase [Coccomyxa subellipsoidea C-169]
Length = 332
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 82/156 (52%), Gaps = 3/156 (1%)
Query: 136 QVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMI 195
+V GT+L A+LA G A N GG HH D G GFC D+++ + + RV+I
Sbjct: 114 EVAGTLLTARLALRHGLACNTAGGTHHAFPDSGSGFCILNDLAVTAAVLLEEARVERVLI 173
Query: 196 IDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKK 255
+DLD HQG+G F + RV+ + + +P ++ D V + GT +EYL+
Sbjct: 174 LDLDVHQGDGTALMFQDEPRVFTMSVHGESNFP---ARKQRSDLDVPLPDGTADDEYLRV 230
Query: 256 LDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
L E L F P+LV+Y+AG D + D LG L +
Sbjct: 231 LGEMLPPVLSCFQPDLVLYDAGVDPHKDDSLGKLAL 266
>gi|395797814|ref|ZP_10477102.1| histone deacetylase family protein [Pseudomonas sp. Ag1]
gi|395338182|gb|EJF70035.1| histone deacetylase family protein [Pseudomonas sp. Ag1]
Length = 306
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 120/261 (45%), Gaps = 20/261 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G + ++ P E L + H
Sbjct: 3 LPLIYHDDYSPEF---PADHRFPMDKFRLLRDHLVESGLTRDSQLLRPELCPAEILALAH 59
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
Y++ S S + +P + L +R V + VGG++LAA+ A E G
Sbjct: 60 EPGYIERYMSGELSREDQRRLGLP----WSEALARRTV-----RAVGGSLLAAEQALEHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A ++ GG HH D GFC + D+++ HY ++RV+I D D HQG+G +
Sbjct: 111 LACHLAGGTHHAHYDYPAGFCIFNDLAVISHYLLASGRVNRVLIFDCDVHQGDGTARILH 170
Query: 212 SDSRVYILDMFNPGIYPRDYEARRF-IDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPE 270
+ + +P AR+ D + + G +YLK +D+AL + P+
Sbjct: 171 DTPDAITVSLHCEKNFP----ARKAQSDWDIPLPMGMGDADYLKVVDDALNYLLPLYQPD 226
Query: 271 LVIYNAGTDILEGDPLGMLKV 291
LV+Y+AG D+ + D LG LK+
Sbjct: 227 LVLYDAGVDVHKDDALGYLKL 247
>gi|421888007|ref|ZP_16319126.1| Histone deacetylase [Ralstonia solanacearum K60-1]
gi|378966642|emb|CCF95874.1| Histone deacetylase [Ralstonia solanacearum K60-1]
Length = 324
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 115/247 (46%), Gaps = 25/247 (10%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSS---PNVSI 110
H F K+ + + +++E + + E A + LL+ H+ Y+ ++ + P
Sbjct: 19 HRFPMRKYSLLRERIAAE--VPGLVLYEAPRAGDDALLLAHAPDYVHAVGAGKLDPARQR 76
Query: 111 IIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGG 170
I P + +V+R R+ G T+ A + A G A+N+ GG HH AD+GGG
Sbjct: 77 EIGFP----WSPAMVERS-----RRSAGATMAACEAAMADGIAVNLAGGTHHAYADKGGG 127
Query: 171 FCAYADISLCIHYAFVQLNISR------VMIIDLDAHQGNGHEKDFSSDSRVYILDMFNP 224
FC + D ++ + +Q R V I+DLD HQGNG D+ V+ L +
Sbjct: 128 FCVFNDAAIASRW--MQRRPGRAQEDFPVAIVDLDVHQGNGTASILRDDASVFTLSLHGE 185
Query: 225 GIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGD 284
YP EA D V + G YL+ L AL+ F P L+IY AG D EGD
Sbjct: 186 KNYPFRKEAS---DLDVGLPDGCGDAAYLEALAGALDTLAARFAPRLIIYLAGADPHEGD 242
Query: 285 PLGMLKV 291
LG LK+
Sbjct: 243 RLGRLKL 249
>gi|398869111|ref|ZP_10624496.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM78]
gi|398231625|gb|EJN17611.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM78]
Length = 312
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 123/261 (47%), Gaps = 14/261 (5%)
Query: 32 IFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLL 91
I LPLIY DY F H F K+ + L G ++ P + L
Sbjct: 6 IMPLPLIYHEDYSPEF---PADHRFPMDKFRLLRDHLVDSGLTRDADLLRPQLCPADILA 62
Query: 92 VVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
+ H SY++ S ++S + + L +R V + VGG++LAA+ A E G
Sbjct: 63 LAHDPSYIERYMSG-DLSREDQRRLGLPWSEALTRRTV-----RAVGGSLLAAEQALEHG 116
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A ++ GG HH D GFC + D+++ H+ ++RV+I D D HQG+G +
Sbjct: 117 LACHLAGGTHHAHYDYPAGFCIFNDLAVISHFLLESGRVNRVLIFDCDVHQGDGTARILH 176
Query: 212 SDSRVYILDMFNPGIYP-RDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPE 270
+ + + +P R E+ D + + +G +YL+ +D+AL + P+
Sbjct: 177 NTPEAVTVSLHCEKNFPARKAES----DWDIPLPNGMGDADYLQVVDDALNYLLPLYQPD 232
Query: 271 LVIYNAGTDILEGDPLGMLKV 291
LV+Y+AG D+ + D LG LK+
Sbjct: 233 LVLYDAGVDVHKDDALGYLKL 253
>gi|398879247|ref|ZP_10634346.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM67]
gi|398197075|gb|EJM84064.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM67]
Length = 306
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 121/261 (46%), Gaps = 20/261 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G ++ P E L + H
Sbjct: 3 LPLIYHEDYSPEF---PAEHRFPMDKFRLLRDHLVDSGLTRDADLLRPELCPPEILALAH 59
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
+Y++ S S + +P + L +R V + VGG++LAA+ A E G
Sbjct: 60 DAAYIERYMSGELSREDQRRLGLP----WNEALARRTV-----RAVGGSLLAAEQALEHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A ++ GG HH D GFC + D+++ HY ++RV+I D D HQG+G +
Sbjct: 111 LACHLAGGTHHAHYDYPAGFCIFNDLAVISHYLLESGRVNRVLIFDCDVHQGDGTARILH 170
Query: 212 SDSRVYILDMFNPGIYP-RDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPE 270
+ + + +P R E+ D + + G +YLK +D+AL + P+
Sbjct: 171 NTPDAVTVSLHCEKNFPARKAES----DWDIPLPKGMGDADYLKVVDDALNYLLPLYQPD 226
Query: 271 LVIYNAGTDILEGDPLGMLKV 291
LV+Y+AG D+ + D LG LK+
Sbjct: 227 LVLYDAGVDVHKDDALGYLKL 247
>gi|374596386|ref|ZP_09669390.1| histone deacetylase superfamily [Gillisia limnaea DSM 15749]
gi|373871025|gb|EHQ03023.1| histone deacetylase superfamily [Gillisia limnaea DSM 15749]
Length = 300
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 109/244 (44%), Gaps = 25/244 (10%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ + + L EG + EP + +L VH E+Y +SLQ
Sbjct: 18 HRFPMEKYELLPKQLLHEGSCTEANFFEPEMPEEAAILAVHDENYFRSLQD--------- 68
Query: 114 VPPVALFPNCLVQRKVLYPF------RKQV--GGTILAAKLAKERGWAINVGGGFHHCSA 165
L + +RK+ +P R+Q+ GTI A++ A + G A+N+ GG HH
Sbjct: 69 -----LSLDKRAERKIGFPLSEALVSREQIIADGTIKASEFALQYGIAMNIAGGTHHAYT 123
Query: 166 DEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
+ G FC D ++ Y +++I+DLD HQGNG + F++D V+ +
Sbjct: 124 NHGEAFCLLNDQAIAARYLQKNKLAKKILIVDLDVHQGNGTAEIFANDDSVFTFSIHGRN 183
Query: 226 IYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDP 285
YP E D + + GT EYLK L + L P + Y +G DIL D
Sbjct: 184 NYPFKKEHS---DLDIAMPDGTGDKEYLKILKDTLPKLIEQQQPNFIFYLSGVDILSTDK 240
Query: 286 LGML 289
LG L
Sbjct: 241 LGKL 244
>gi|312963190|ref|ZP_07777675.1| histone deacetylase superfamily [Pseudomonas fluorescens WH6]
gi|311282701|gb|EFQ61297.1| histone deacetylase superfamily [Pseudomonas fluorescens WH6]
Length = 306
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 120/263 (45%), Gaps = 20/263 (7%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LPLIY DY F H F K+ + L G + ++ P + L +
Sbjct: 1 MPLPLIYHDDYSPEF---PAEHRFPMDKFRLLRDHLVDSGLTLDSQLLRPPLCPPQILAL 57
Query: 93 VHSESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
H Y++ S S + +P + L +R V + VGG+ILAA+ A E
Sbjct: 58 AHEPGYIERYMSGELSREDQRRLGLP----WSEALARRTV-----RAVGGSILAAEQALE 108
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKD 209
G A ++ GG HH D GFC + D+++ HY ++RV+I D D HQG+G +
Sbjct: 109 HGLACHLAGGTHHAHYDYPAGFCIFNDLAVISHYLLASGRVNRVLIFDCDVHQGDGTARI 168
Query: 210 FSSDSRVYILDMFNPGIYPRDYEARRF-IDQKVEVVSGTTTNEYLKKLDEALEVAGHTFD 268
+ + +P AR+ D + + G +YLK +D+AL +
Sbjct: 169 LHDTPEAITVSLHCEKNFP----ARKAQSDWDIPLPMGMGDADYLKVVDDALNYLLPLYQ 224
Query: 269 PELVIYNAGTDILEGDPLGMLKV 291
P+LV+Y+AG D+ + D LG LK+
Sbjct: 225 PDLVLYDAGVDVHKDDALGYLKL 247
>gi|163761313|ref|ZP_02168388.1| hypothetical protein HPDFL43_21684 [Hoeflea phototrophica DFL-43]
gi|162281470|gb|EDQ31766.1| hypothetical protein HPDFL43_21684 [Hoeflea phototrophica DFL-43]
Length = 271
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 105/227 (46%), Gaps = 11/227 (4%)
Query: 66 QFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVP-PVALFPNCL 124
+ ++ G + P+ AS E L + HS SY+ + +S VP P+
Sbjct: 2 ELIAESGLSARASFHMPVPASAEWLALAHSRSYVDQVIAS-------RVPAPIEREIGFA 54
Query: 125 VQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYA 184
V +V R GT++AA+LA G A N GG HH D+G GFC + D+++
Sbjct: 55 VDERVSLRARLATAGTVMAARLALSEGIACNTAGGSHHARRDQGAGFCTFNDVAVASLVL 114
Query: 185 FVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVV 244
++++DLD HQG+G + +++ V + + YP ++ D V +
Sbjct: 115 LADGEARNILVVDLDVHQGDGTAEICGANAAVRTVSVHGEKNYP---VRKQTSDIDVALP 171
Query: 245 SGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
G YL+ +D L FDP+LV +NAG D E D LG L +
Sbjct: 172 DGVRDEAYLETIDWLLPQTIDRFDPDLVFFNAGVDPHEADRLGRLSL 218
>gi|99643283|emb|CAK22358.1| class 4 HDAC protein [Platynereis dumerilii]
Length = 322
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 118/261 (45%), Gaps = 20/261 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LP+I+ DY +S L K H F K+ + +L + + + EP E S + +VH
Sbjct: 20 LPIIHHHDY-VSEL--PKGHRFAMKKFHGVFNYLLKDNIIQMKQVAEPDEVSSQVAGLVH 76
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAI 154
+ Y++ + E N + +L R + GGT+L LAKERG A
Sbjct: 77 TPEYVEKFFTGKTSE--KEQRRTGFKWN----KGLLRRCRLEAGGTVLGCHLAKERGLAC 130
Query: 155 NVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDS 214
+ GGG HH G G+C D+++ + RV+I+DLD HQG+G F
Sbjct: 131 STGGGTHHAFPSYGSGYCLLNDLAIAAENSVATGVAERVLIVDLDVHQGDGTANIFEDSD 190
Query: 215 RVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTN----EYLKKLDEALEVAGHTFDPE 270
++ M +P F+ Q ++ G + EY+++L L V TF P
Sbjct: 191 SIFTFSMHCQSNFP-------FVKQNSDLDVGLADHIGDAEYMRELQTHLPVILETFHPG 243
Query: 271 LVIYNAGTDILEGDPLGMLKV 291
L++Y+AG D D LG L +
Sbjct: 244 LILYDAGVDPHVKDELGKLDL 264
>gi|426411628|ref|YP_007031727.1| histone deacetylase superfamily protein [Pseudomonas sp. UW4]
gi|426269845|gb|AFY21922.1| histone deacetylase superfamily protein [Pseudomonas sp. UW4]
Length = 306
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 121/258 (46%), Gaps = 14/258 (5%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G ++ P + L + H
Sbjct: 3 LPLIYHEDYSPEF---PADHRFPMEKFRLLRDHLVDSGLTRDADLLRPDLCPADILALAH 59
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAI 154
SY+ S ++S + + L +R V + VGG++LAA+ A E G A
Sbjct: 60 DPSYIDRYMSG-DLSREDQRRLGLPWTEALARRTV-----RAVGGSLLAAEQALEHGLAC 113
Query: 155 NVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDS 214
++ GG HH D GFC + D+++ HY ++RV+I D D HQG+G + +
Sbjct: 114 HLAGGTHHAHYDYPAGFCIFNDLAVISHYLLESGRVNRVLIFDCDVHQGDGTARILHNTP 173
Query: 215 RVYILDMFNPGIYP-RDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVI 273
+ + +P R E+ D + + +G +YLK +D+AL + P+LV+
Sbjct: 174 EAVTVSLHCEKNFPARKAES----DWDIPLPNGMGDADYLKVVDDALNYLLPLYQPDLVL 229
Query: 274 YNAGTDILEGDPLGMLKV 291
Y+AG D+ + D LG LK+
Sbjct: 230 YDAGVDVHKDDALGYLKL 247
>gi|71907996|ref|YP_285583.1| histone deacetylase superfamily protein [Dechloromonas aromatica
RCB]
gi|71847617|gb|AAZ47113.1| Histone deacetylase superfamily [Dechloromonas aromatica RCB]
Length = 300
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 115/253 (45%), Gaps = 15/253 (5%)
Query: 44 DISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQ 103
D+ L + H F K+ R+ Q L + G ++ P A+ E+L H Y++++
Sbjct: 7 DVFVLPLPAGHRFPMEKYSRLRQALLASGEFSESDFQLPHAATDEELGRAHDLDYIQAI- 65
Query: 104 SSPNVSIIIEVPPVAL-FP--NCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGF 160
++ + E A+ FP +V+R R+ G TI A + A + N+ GG
Sbjct: 66 ---SIGELSEAAQKAIGFPWSQGMVERS-----RRSAGATICACRAALAEDVSANLAGGT 117
Query: 161 HHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILD 220
HH D G GFC + D ++ + RV+I+D D HQGNG D ++
Sbjct: 118 HHAFRDHGEGFCIFNDAAVAARTMQAEGRAKRVLIVDCDVHQGNGTASILRGDDSIFTFS 177
Query: 221 MFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDI 280
+ +P D E D +E+ G + + YL L+E L +A P+LVIY AG D
Sbjct: 178 IHGARNFPFDKEQS---DLDIELPDGCSDDAYLAHLEEGLGIAFDASRPDLVIYLAGADP 234
Query: 281 LEGDPLGMLKVKW 293
D LG L + +
Sbjct: 235 YHDDRLGRLGLSF 247
>gi|348028362|ref|YP_004871048.1| histone deacetylase family protein [Glaciecola nitratireducens
FR1064]
gi|347945705|gb|AEP29055.1| histone deacetylase family protein [Glaciecola nitratireducens
FR1064]
Length = 298
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 124/263 (47%), Gaps = 28/263 (10%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
L++ P Y S L + H F K+ I L E + EP S E L ++
Sbjct: 4 LVFHPIY--SQLDLPVRHRFPIQKYQGIKDALLREK-VSAEFFYEPKPLSIEALSRIYDP 60
Query: 97 SYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTILAAKLAK 148
Y+ L S E+ P A+ R++ +P+ Q+ GGT+L + LA
Sbjct: 61 VYISQLCSG-------ELDPKAM-------RRIGFPWSTQLVERTLTAAGGTVLTSTLAI 106
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEK 208
E G A+N+ GG+HH + G GFC D+ L +I +V+I D D HQG+G K
Sbjct: 107 EYGKALNLTGGYHHAFGNFGSGFCMVNDLYLAALNMLQSPSIDKVLIFDCDVHQGDGTAK 166
Query: 209 DFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFD 268
+++S VY + + +P ++ D + GT +EYL +++A ++A F
Sbjct: 167 LAANNSAVYTVSIHGEKNFPH---RKQVSDLDFGLTKGTGDDEYLATVEQAWQMAMTYFQ 223
Query: 269 PELVIYNAGTDILEGDPLGMLKV 291
P+ VIY+AG D+ D LG L +
Sbjct: 224 PDAVIYDAGVDVHIDDDLGHLNI 246
>gi|171058674|ref|YP_001791023.1| histone deacetylase superfamily protein [Leptothrix cholodnii SP-6]
gi|170776119|gb|ACB34258.1| histone deacetylase superfamily [Leptothrix cholodnii SP-6]
Length = 318
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/221 (33%), Positives = 108/221 (48%), Gaps = 17/221 (7%)
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVG 138
+V+ AS +L +VH +Y+ ++Q +S E + + +R R+ VG
Sbjct: 40 LVQAAAASDGELALVHEPAYVDAVQHG-RLSAQQEREIGFPWSPAMAERA-----RRSVG 93
Query: 139 GTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNIS-----RV 193
TI AA+ A G + N+ GG HH SA G GFC + D+++ + + R+
Sbjct: 94 ATIAAARCALAEGISGNLAGGTHHASAGGGSGFCVFNDVAVAARLMQAEWHRRHRQFLRI 153
Query: 194 MIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYL 253
+IDLD HQGNG F+ D VY L M +P A D V++ G T YL
Sbjct: 154 AVIDLDVHQGNGTASIFADDPMVYTLSMHGEKNFPFRKVAS---DHDVDLPDGCTDGPYL 210
Query: 254 KKLDEALE-VAGHTFD--PELVIYNAGTDILEGDPLGMLKV 291
+ LD ALE + H + P L+ Y AG D EGD LG LK+
Sbjct: 211 QALDAALERLWQHHAESPPGLIFYIAGADPHEGDRLGRLKI 251
>gi|392544970|ref|ZP_10292107.1| histone deacetylase [Pseudoalteromonas rubra ATCC 29570]
Length = 307
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 122/263 (46%), Gaps = 21/263 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPL+Y P+Y SF + H F SK+ + Q + + G + N + +P S E L VH
Sbjct: 12 LPLVYHPNYSFSF---DPNHRFVMSKFANLYQQVRAMGLIGDN-VYQPELGSPEPLETVH 67
Query: 95 SESYLKSL---QSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
++YL L Q I +P + L+ R P GT+ A+LA + G
Sbjct: 68 CDTYLWDLWRNQLDAKSMRRIGLP----WSEQLMARTFTAPL-----GTLKTAELALQTG 118
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A ++ GG HH D G G+C D+ Q ++ V+I DLD HQG+G
Sbjct: 119 VACHLAGGTHHAHYDFGSGYCMVNDLVFTSTTLIAQGKVNNVLIFDLDVHQGDGTAAMLK 178
Query: 212 SDSRVYILDMFNPGIYP-RDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPE 270
+ V+ + +P R + + D + + + +YL+ +++ L +P+
Sbjct: 179 HNPYVFTCSIHCEKNFPFRKHSS----DLDIGLTNNLKDADYLQIVEDTLTGLLEDVNPD 234
Query: 271 LVIYNAGTDILEGDPLGMLKVKW 293
LV+Y+AG DI E D LG L + W
Sbjct: 235 LVLYDAGVDIWEHDGLGKLDISW 257
>gi|299066616|emb|CBJ37806.1| Histone deacetylase [Ralstonia solanacearum CMR15]
Length = 327
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 105/225 (46%), Gaps = 33/225 (14%)
Query: 81 EPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPF------- 133
E A + LL+ H+ Y+ ++ + + P QR++ +P+
Sbjct: 48 EAPRAEDDALLLAHAPDYISAVGAG-------RLEPAR-------QREIGFPWSPEMVER 93
Query: 134 -RKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISR 192
R+ G T+ A + A G A+N+ GG HH AD+GGGFC + D ++ + +Q + R
Sbjct: 94 SRRSAGATMAACEAAMADGIAVNLAGGTHHAYADKGGGFCVFNDAAIASRW--MQRRLGR 151
Query: 193 ------VMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSG 246
V I+DLD HQGNG DS V+ L + YP EA D V + G
Sbjct: 152 TPEHFPVAIVDLDVHQGNGTASILRDDSSVFTLSVHGEKNYPFRKEAS---DLDVGLPDG 208
Query: 247 TTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
YL+ L AL+ F P L+IY AG D EGD LG L++
Sbjct: 209 CGDAAYLEALAGALDTLAARFAPRLIIYLAGADPHEGDRLGRLRL 253
>gi|398885389|ref|ZP_10640302.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM60]
gi|398192581|gb|EJM79728.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM60]
Length = 306
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 121/261 (46%), Gaps = 20/261 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G ++ P E L + H
Sbjct: 3 LPLIYHEDYSPEF---PADHRFPMDKFRLLRDHLVDSGLTRDADLLRPELCPPEILALAH 59
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
+Y++ S S + +P + L +R V + VGG++LAA+ A E G
Sbjct: 60 DAAYIERYMSGELSREDQRRLGLP----WNEALARRTV-----RAVGGSLLAAEQALEHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A ++ GG HH D GFC + D+++ HY ++RV+I D D HQG+G +
Sbjct: 111 LACHLAGGTHHAHYDYPAGFCIFNDLAVISHYLLESGRVNRVLIFDCDVHQGDGTARILH 170
Query: 212 SDSRVYILDMFNPGIYP-RDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPE 270
+ + + +P R E+ D + + G +YLK +D+AL + P+
Sbjct: 171 NTPDAVTVSLHCEKNFPARKAES----DWDIPLPKGMGDADYLKVVDDALNYLLPLYQPD 226
Query: 271 LVIYNAGTDILEGDPLGMLKV 291
LV+Y+AG D+ + D LG LK+
Sbjct: 227 LVLYDAGVDVHKDDALGYLKL 247
>gi|398954423|ref|ZP_10675959.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM33]
gi|398152442|gb|EJM40961.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM33]
Length = 308
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 121/261 (46%), Gaps = 20/261 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G ++ P + L + H
Sbjct: 5 LPLIYHEDYSPEF---PADHRFPMDKFRLLRDHLVDSGLTRDVDLLRPDLCPADILALAH 61
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
SY++ S S + +P + L +R V + VGG++LAA+ A E G
Sbjct: 62 DPSYIERYMSGELSREDQRRLGLP----WSEALARRTV-----RAVGGSLLAAEQAMEHG 112
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A ++ GG HH D GFC + D+++ HY ++RV+I D D HQG+G +
Sbjct: 113 LACHLAGGTHHAHYDYPAGFCIFNDLAVISHYLLESGRVNRVLIFDCDVHQGDGTARILQ 172
Query: 212 SDSRVYILDMFNPGIYP-RDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPE 270
+ + +P R E+ D + + +G +YLK +D+AL + P+
Sbjct: 173 HTPEAVTVSLHCEKNFPARKAES----DWDIPLPNGMGDADYLKVVDDALNYLLPLYQPD 228
Query: 271 LVIYNAGTDILEGDPLGMLKV 291
LV+Y+AG D+ + D LG LK+
Sbjct: 229 LVLYDAGVDVHKDDALGYLKL 249
>gi|284037371|ref|YP_003387301.1| histone deacetylase [Spirosoma linguale DSM 74]
gi|283816664|gb|ADB38502.1| Histone deacetylase [Spirosoma linguale DSM 74]
Length = 300
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 116/257 (45%), Gaps = 12/257 (4%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
L + +SP Y L + + H F K+ I + L EG + P L VH
Sbjct: 2 LQIAFSPVYR---LRLPEGHRFPMLKYELIHEQLLYEGTCTEANFFGPEPVDDRWALGVH 58
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAI 154
+ Y+++L++ ++ L P + + ++ GTI +LA+ G A+
Sbjct: 59 TAEYVQALKTCTVDPKMMRRIGFPLTPELIDREWII------TQGTIECTQLAQRDGVAM 112
Query: 155 NVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDS 214
N+ GG HH D G GFC D+ + +Y +++++DLD HQGNG F ++S
Sbjct: 113 NIAGGTHHAFPDRGEGFCMLNDVGIAANYLLEIGQAKKILVVDLDVHQGNGTAVMFQTES 172
Query: 215 RVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIY 274
RV+ M YP E D +++ +GTT YL L + L P+ + Y
Sbjct: 173 RVFTFSMHGADNYPLRKETS---DLDIDLPTGTTDEVYLNTLYDTLPHLISQQQPDFLFY 229
Query: 275 NAGTDILEGDPLGMLKV 291
+G DIL D LG L +
Sbjct: 230 VSGVDILASDRLGKLSI 246
>gi|228472500|ref|ZP_04057260.1| histone deacetylase family protein [Capnocytophaga gingivalis ATCC
33624]
gi|228275913|gb|EEK14669.1| histone deacetylase family protein [Capnocytophaga gingivalis ATCC
33624]
Length = 287
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 105/244 (43%), Gaps = 21/244 (8%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS-----LQSSPNV 108
H F K+ + + L EG ++ P + S D + H Y+++ L +
Sbjct: 5 HRFPMEKYALLHEQLLWEGVAEEEDFFAPAKVSIADASLAHDRGYVEAFVGLHLPERTRI 64
Query: 109 SI-IIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADE 167
I ++ P + LVQ GTI A A E G A N+ GG HH +D
Sbjct: 65 RIGFVQSPQLVARELTLVQ------------GTIDGAHYALEEGIAFNIAGGTHHAYSDR 112
Query: 168 GGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIY 227
G GFC D ++ Y R++I+DLD HQGNG + F+ V+ M Y
Sbjct: 113 GEGFCMLNDQAVAAAYLLKTGRAKRILIVDLDVHQGNGTAEIFAHREEVFTFSMHARDNY 172
Query: 228 PRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLG 287
P E D+ +E+ TT EYL L+ L V P+ V Y +G D+L D G
Sbjct: 173 PFVKEQS---DKDIELPKQTTDKEYLSLLEATLPVLFEQHRPDFVFYQSGVDVLGSDRFG 229
Query: 288 MLKV 291
+L +
Sbjct: 230 LLNL 233
>gi|75909399|ref|YP_323695.1| histone deacetylase superfamily protein [Anabaena variabilis ATCC
29413]
gi|75703124|gb|ABA22800.1| Histone deacetylase superfamily [Anabaena variabilis ATCC 29413]
Length = 305
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 116/264 (43%), Gaps = 22/264 (8%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
+LP+IY P Y + + H F +K+ ++ + L S+ P+ E + +
Sbjct: 1 MELPIIYHPHY---VAPLPEGHRFPMAKFKKLYELLLSDDVAQTEQFYTPILPHPELIEL 57
Query: 93 VHSESYLKS-----LQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLA 147
VH+ Y++S L + I + P C+ VGGTIL A+LA
Sbjct: 58 VHTPDYVRSYCEGTLDTKAQRRIGLPWSPALANRTCIA-----------VGGTILTAQLA 106
Query: 148 KERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHE 207
+G A N GG HH G GFC + DI++ Q + +++I+DLD HQG+G
Sbjct: 107 LNQGLACNTAGGTHHAFPSYGSGFCIFNDIAIASRVLQQQQLVKKILIVDLDVHQGDGTA 166
Query: 208 KDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTF 267
F D V+ M +P ++ D V + G + YL+ L L
Sbjct: 167 FIFQDDDSVFTFSMHCEVNFP---GTKQHSDLDVPLPVGMEDDAYLQTLASYLPDLLSEI 223
Query: 268 DPELVIYNAGTDILEGDPLGMLKV 291
P+LV Y+AG D GD LG L +
Sbjct: 224 KPDLVFYDAGVDPHIGDRLGKLAL 247
>gi|398905223|ref|ZP_10652679.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM50]
gi|398174733|gb|EJM62519.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM50]
Length = 329
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 120/261 (45%), Gaps = 20/261 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G ++ P E L + H
Sbjct: 26 LPLIYHEDYSPEF---PADHRFPMDKFRLLRDHLVDSGLARDTDLLRPDLCPPEILALAH 82
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
+Y++ S + +P + L +R V + VGG++LAA+ A E G
Sbjct: 83 DPAYIERYMGGELSREDQRRLGLP----WSEALARRTV-----RAVGGSLLAAEQALEHG 133
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A ++ GG HH D GFC + D+++ HY ++RV+I D D HQG+G +
Sbjct: 134 LACHLAGGTHHAHYDHPAGFCIFNDLAVISHYLLESGRVNRVLIFDCDVHQGDGTARILH 193
Query: 212 SDSRVYILDMFNPGIYP-RDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPE 270
+ + + +P R E+ D + + G +YLK +D+AL + P+
Sbjct: 194 NTPEAITVSLHCEKNFPARKAES----DWDIPLPMGMGDADYLKVVDDALNYLLPLYQPD 249
Query: 271 LVIYNAGTDILEGDPLGMLKV 291
LV+Y+AG D+ + D LG LK+
Sbjct: 250 LVLYDAGVDVHKDDALGYLKL 270
>gi|116072402|ref|ZP_01469669.1| putative histone deacetylase/AcuC/AphA family protein
[Synechococcus sp. BL107]
gi|116064924|gb|EAU70683.1| putative histone deacetylase/AcuC/AphA family protein
[Synechococcus sp. BL107]
Length = 283
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 112/237 (47%), Gaps = 17/237 (7%)
Query: 59 SKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSL---QSSPNVSIIIEVP 115
+K+ + Q L +G +++ I PL S+ DL +H Y ++ Q + I +P
Sbjct: 2 AKFKLLHQLLLDQGLIERKQIYVPLSISRRDLEEIHPRRYHETFSRDQLTRPEQRRIGLP 61
Query: 116 PVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYA 175
+ LVQR L VGGT+L A+LA G A ++ GG HH + G GFC +
Sbjct: 62 ATS----ALVQRTWL-----AVGGTLLTARLALRYGLANHLAGGTHHAHPEFGSGFCIFN 112
Query: 176 DISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP-RDYEAR 234
D ++ + + +++I+DLD HQG+G F +D RV + +P R +
Sbjct: 113 DCAVAARVLLQRHEVEKILIVDLDVHQGDGSAACFQADERVTTFSVHAASNFPLRKVNS- 171
Query: 235 RFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
D + + GT +YL + + L P+LV++NAG D D LG L +
Sbjct: 172 ---DIDIPLPDGTEDQDYLAAIGDQLPDVLDQLRPQLVLFNAGVDPHRDDRLGRLHL 225
>gi|344174578|emb|CCA86379.1| histone deacetylase [Ralstonia syzygii R24]
Length = 322
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 104/220 (47%), Gaps = 23/220 (10%)
Query: 81 EPLEASKEDLLVVHSESYLKSLQSS---PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV 137
E A + LL+VH+ Y+ ++ + P I P + +V+R R+
Sbjct: 42 EAPRAGNDALLLVHAPDYVSAVGAGRLDPARQREIGFP----WSLAMVERS-----RRSA 92
Query: 138 GGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISR----- 192
G T+ A + A G A+N+ GG HH AD+GGGFC + D ++ + +Q R
Sbjct: 93 GATMAACEAAMIDGIAVNLAGGTHHAYADKGGGFCVFNDAAIASRW--IQRRPGRTPDGF 150
Query: 193 -VMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNE 251
V I+DLD HQGNG D+ V+ L + YP EA D V + G
Sbjct: 151 PVAIVDLDVHQGNGTASILRDDASVFTLSVHGEKNYPFRKEAS---DLDVGLPDGCGDEA 207
Query: 252 YLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
YL+ L AL+ F P L+IY AG D EGD LG LK+
Sbjct: 208 YLEALAGALDTLAARFAPRLIIYLAGADPHEGDRLGRLKL 247
>gi|110636746|ref|YP_676953.1| deacetylase [Cytophaga hutchinsonii ATCC 33406]
gi|110279427|gb|ABG57613.1| deacetylase [Cytophaga hutchinsonii ATCC 33406]
Length = 300
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 115/257 (44%), Gaps = 12/257 (4%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
L + Y P Y+ + + H F K+ I + L EG + ++ + P+ + EDLL
Sbjct: 2 LQIAYHPVYNHP---VPEGHRFPMLKYDLIAEQLVYEGTITESNLTTPVRIASEDLLRSQ 58
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAI 154
+Y+ L + I L + + +V+ + GTI +A A + G +
Sbjct: 59 DATYVHKLNTLSLSPSEIRKTGFELTAELVYREEVI------MQGTIDSALHALKHGIGM 112
Query: 155 NVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDS 214
N+ GG HH + G GFC Y DI L Y +V+++DLD HQGNG K ++
Sbjct: 113 NIAGGTHHAYKEHGEGFCLYNDIILAADYLLANKLAHQVLVVDLDVHQGNGTAKMAEGNT 172
Query: 215 RVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIY 274
+++ M YP E D + + T YL L+E L T P+ + +
Sbjct: 173 QIFTFSMHGASNYPAHKEQS---DLDIGLPDKTGDKAYLNLLEENLSRLIDTLQPDHIFF 229
Query: 275 NAGTDILEGDPLGMLKV 291
+G D+LE D LG L +
Sbjct: 230 QSGVDVLETDKLGKLSL 246
>gi|148653959|ref|YP_001281052.1| histone deacetylase superfamily protein [Psychrobacter sp. PRwf-1]
gi|148573043|gb|ABQ95102.1| histone deacetylase superfamily [Psychrobacter sp. PRwf-1]
Length = 302
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 122/262 (46%), Gaps = 22/262 (8%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
L + +SP Y + + H F K+ I + L +EG L ++ P + S+ ++L H
Sbjct: 2 LKIAFSPIY---LYDVPEKHRFPMQKYRLIPERLLAEGTLTQDNFFAPDKVSEAEILTTH 58
Query: 95 SESYLKSL--QSSPNV---SIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
+ Y L Q+ P +I E+ P LV+R R T A AK+
Sbjct: 59 TPEYWDKLKTQTLPRKEARAIGFEMTPQ------LVERG-----RYIAHATYECALYAKQ 107
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKD 209
G ++NV GG HH AD G GFC + D+ + + + S+++I+DLD HQGNG+
Sbjct: 108 YGVSLNVAGGTHHAFADHGEGFCVFNDVCIASNLLLSRGQASKILIVDLDVHQGNGNASI 167
Query: 210 FSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDP 269
+++ RV++ M YP D +++ + T YL L + L +P
Sbjct: 168 MANEPRVFVFSMHGEKNYPFRKPPS---DLDIDLPNDTDDATYLTLLKDTLPKLIAEHEP 224
Query: 270 ELVIYNAGTDILEGDPLGMLKV 291
+L+ Y + D+L D LG L +
Sbjct: 225 DLIFYQSAVDVLASDKLGKLAL 246
>gi|387790625|ref|YP_006255690.1| deacetylase [Solitalea canadensis DSM 3403]
gi|379653458|gb|AFD06514.1| deacetylase, histone deacetylase/acetoin utilization protein
[Solitalea canadensis DSM 3403]
Length = 299
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 107/241 (44%), Gaps = 15/241 (6%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESY---LKSLQSSPNVSI 110
H F K+ I + L EG + + P +E +L+ H Y LK+L SP
Sbjct: 17 HRFPMIKYELIPEQLLHEGTITHENLFSPAFVPEEIILLTHKHEYWNKLKTLTLSPQEER 76
Query: 111 IIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGG 170
P L+ R++ GTI A G A+NV GG HH D+G G
Sbjct: 77 RTGFP----LSQQLIDREITI-----AQGTIDCCYYALNDGVALNVAGGTHHAFTDKGEG 127
Query: 171 FCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRD 230
FC DI++ +Y + S+++++DLD HQGNG + F + V+ M +P
Sbjct: 128 FCLLNDIAIAANYLLKKKIASKILVVDLDVHQGNGTAEIFQDNKAVFTFSMHGKTNWP-- 185
Query: 231 YEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLK 290
Y+ R D +E+ T YL L E L P+ + Y +G DILE D LG L
Sbjct: 186 YKKER-SDLDIELPDNTDDQLYLGLLKETLTHLIKKEKPDFIFYQSGVDILESDKLGKLS 244
Query: 291 V 291
V
Sbjct: 245 V 245
>gi|423693709|ref|ZP_17668229.1| histone deacetylase family protein [Pseudomonas fluorescens SS101]
gi|388002286|gb|EIK63615.1| histone deacetylase family protein [Pseudomonas fluorescens SS101]
Length = 306
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 120/263 (45%), Gaps = 20/263 (7%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LPLIY DY F H F K+ + L G + + ++ P + L +
Sbjct: 1 MPLPLIYHEDYSPEF---PADHRFPMDKFRLLRDHLVDSGLTEDSQLLRPPLCPADILAL 57
Query: 93 VHSESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
H Y++ S + +P + L +R V + VGG+ILAA+ A E
Sbjct: 58 AHEPGYIERYMGGELSREDQRRLGLP----WSEALARRTV-----RAVGGSILAAEQALE 108
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKD 209
G A ++ GG HH D GFC + D+++ HY ++RV+I D D HQG+G +
Sbjct: 109 HGLACHLAGGTHHAHYDYPAGFCIFNDLAVISHYLLASGRVNRVLIFDCDVHQGDGTARI 168
Query: 210 FSSDSRVYILDMFNPGIYPRDYEARRF-IDQKVEVVSGTTTNEYLKKLDEALEVAGHTFD 268
+ + +P AR+ D + + G +YLK +D+AL +
Sbjct: 169 LHDTPDAITVSLHCEKNFP----ARKAQSDWDIPLPMGMGDADYLKVVDDALNYLLPLYQ 224
Query: 269 PELVIYNAGTDILEGDPLGMLKV 291
P+LV+Y+AG D+ + D LG LK+
Sbjct: 225 PDLVLYDAGVDVHKDDALGYLKL 247
>gi|392540847|ref|ZP_10287984.1| histone deacetylase [Pseudoalteromonas piscicida JCM 20779]
Length = 301
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 120/263 (45%), Gaps = 19/263 (7%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
LPL+Y +Y +F + H F SK+ R+ Q + + G + N + P + L V
Sbjct: 5 NLPLVYHANYSFNF---DPKHRFVMSKFARLYQEVDALGLIHNN-VYSPEPGNPSPLESV 60
Query: 94 HSESYLKSL---QSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKER 150
H E Y+ L Q + I +P + L+ R P GT+ A+LA +
Sbjct: 61 HCEQYVWDLWRNQLDAKMMRHIGLP----WSEQLMARTFTAPL-----GTLKTAELALKH 111
Query: 151 GWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDF 210
G A ++ GG HH D G GFC D++ + I+ +I DLD HQG+G
Sbjct: 112 GIACHLAGGTHHAHYDFGSGFCMVNDLAFTATHLLENNQITNALIFDLDVHQGDGTAAML 171
Query: 211 SSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPE 270
+ VY + +P A +D +EV G + YL+ + LE +P+
Sbjct: 172 KHNPYVYTCSIHCEKNFPFRKHASD-LDIGLEV--GISDTHYLEIVAHTLESLLVDLNPD 228
Query: 271 LVIYNAGTDILEGDPLGMLKVKW 293
+V+Y+AG D+ +GD LG L + W
Sbjct: 229 IVLYDAGVDVWQGDNLGKLDISW 251
>gi|441502098|ref|ZP_20984109.1| Histone deacetylase/AcuC/AphA family protein [Photobacterium sp.
AK15]
gi|441429845|gb|ELR67296.1| Histone deacetylase/AcuC/AphA family protein [Photobacterium sp.
AK15]
Length = 311
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 126/269 (46%), Gaps = 32/269 (11%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIV---EPLEASKEDLL 91
LPL+Y P Y S L + + H + +K+ + +L+ E + I +P+ +L
Sbjct: 2 LPLVYHPIY--SQLDLPEGHRYPITKYRLLYDYLNCELNITNRAITAFHQPIPIEAHELK 59
Query: 92 VVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTILA 143
+H Y+++L ++ +P + R++ +P+ +Q+ GT L
Sbjct: 60 SLHCPDYIEALVNN-------SLPAAKM-------RRIGFPWSQQLIDRTLMSAAGTRLT 105
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQG 203
LA E G I++ GG+HH D G GFC D++ +A I +VMIID D HQG
Sbjct: 106 VDLAFEHGIGIHLSGGYHHAHHDFGSGFCLINDLAFAARHALTLDGIEKVMIIDCDVHQG 165
Query: 204 NGHEKDFSSDSRVYILDMFNPGIYPRDYEARR-FIDQKVEVVSGTTTNEYLKKLDEALEV 262
+G + + + + +P AR+ D + + TTTNEY++ + L +
Sbjct: 166 DGTATLLADEPNIITFSVHCDKNFP----ARKPDSDIDLALPKSTTTNEYIETFESILNL 221
Query: 263 AGHTFDPELVIYNAGTDILEGDPLGMLKV 291
A P+ ++Y+AG DI + D LG +
Sbjct: 222 ALAQHQPDFILYDAGVDIHKDDELGYFDI 250
>gi|398858263|ref|ZP_10613955.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM79]
gi|398239575|gb|EJN25282.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM79]
Length = 306
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 120/261 (45%), Gaps = 20/261 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G ++ P E L + H
Sbjct: 3 LPLIYHEDYSPEF---PADHRFPMDKFRLLRDHLVDSGLTRDTDLLRPDLCPPEILALAH 59
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
+Y++ S + +P + L +R V + VGG++LAA+ A E G
Sbjct: 60 DPAYIERYMGGELSREDQRRLGLP----WSEALARRTV-----RAVGGSLLAAEQALEHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A ++ GG HH D GFC + D+++ HY ++RV+I D D HQG+G +
Sbjct: 111 LACHLAGGTHHAHYDHPAGFCIFNDLAVISHYLLESGRVNRVLIFDCDVHQGDGTARILH 170
Query: 212 SDSRVYILDMFNPGIYP-RDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPE 270
+ + + +P R E+ D + + G +YLK +D+AL + P+
Sbjct: 171 NTPEAITVSLHCEKNFPARKAES----DWDIPLPMGMGDADYLKVVDDALNYLLPLYQPD 226
Query: 271 LVIYNAGTDILEGDPLGMLKV 291
LV+Y+AG D+ + D LG LK+
Sbjct: 227 LVLYDAGVDVHKDDALGYLKL 247
>gi|398980080|ref|ZP_10688815.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM25]
gi|398135039|gb|EJM24169.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM25]
Length = 306
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 121/261 (46%), Gaps = 20/261 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G ++ P + L + H
Sbjct: 3 LPLIYHEDYSPEF---PADHRFPMDKFRLLRDHLVDSGLTRDEDLLRPELCPADILALAH 59
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
Y++ S S + +P + L +R V + VGG+ILAA+ A E G
Sbjct: 60 DRGYIERYMSGELSREDQRRLGLP----WNEALARRTV-----RAVGGSILAAEKALEHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A ++ GG HH D GFC + D+++ HY ++RV+I D D HQG+G +
Sbjct: 111 LACHLAGGTHHAHYDYPAGFCIFNDLAIISHYLLQSGRVNRVLIFDCDVHQGDGTARILH 170
Query: 212 SDSRVYILDMFNPGIYP-RDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPE 270
+ + + +P R E+ D + + +G +YLK +D+AL + P+
Sbjct: 171 NTPEAITVSLHCEKNFPARKAES----DWDIPLPNGMGDADYLKVVDDALNYLLPLYQPD 226
Query: 271 LVIYNAGTDILEGDPLGMLKV 291
LV+Y+AG D+ + D LG L++
Sbjct: 227 LVLYDAGVDVHKDDALGYLQL 247
>gi|398837941|ref|ZP_10595225.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM102]
gi|398117499|gb|EJM07250.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM102]
Length = 306
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 120/261 (45%), Gaps = 20/261 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G ++ P E L + H
Sbjct: 3 LPLIYHEDYSPEF---PADHRFPMDKFRLLRDHLVDSGLARDTDLLRPDLCPPEILALAH 59
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
+Y++ S + +P + L +R V + VGG++LAA+ A E G
Sbjct: 60 DPAYIERYMGGELSREDQRRLGLP----WSEALARRTV-----RAVGGSLLAAEQALEHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A ++ GG HH D GFC + D+++ HY ++RV+I D D HQG+G +
Sbjct: 111 LACHLAGGTHHAHYDHPAGFCIFNDLAVISHYLLESGRVNRVLIFDCDVHQGDGTARILH 170
Query: 212 SDSRVYILDMFNPGIYP-RDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPE 270
+ + + +P R E+ D + + G +YLK +D+AL + P+
Sbjct: 171 NTPEAITVSLHCEKNFPARKAES----DWDIPLPMGMGDADYLKVVDDALNYLLPLYQPD 226
Query: 271 LVIYNAGTDILEGDPLGMLKV 291
LV+Y+AG D+ + D LG LK+
Sbjct: 227 LVLYDAGVDVHKDDALGYLKL 247
>gi|337270974|ref|YP_004615029.1| Histone deacetylase [Mesorhizobium opportunistum WSM2075]
gi|336031284|gb|AEH90935.1| Histone deacetylase [Mesorhizobium opportunistum WSM2075]
Length = 298
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 115/267 (43%), Gaps = 32/267 (11%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
L +++ PDYD F H F SK+ + + L + G EP AS L + H
Sbjct: 3 LQIVHHPDYDAGF---AVNHRFPMSKYPLLMEALRARGLAGALNTAEPASASW--LKLAH 57
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTILAAKL 146
+ Y+ + + F ++R++ +P +V GGTILAA+L
Sbjct: 58 AADYVDQV--------------IGCFVPEKIEREIGFPIGPRVSRRAQLATGGTILAARL 103
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
A G A N GG HH +G GFC + D+++ + +++IDLD HQG+G
Sbjct: 104 ALRHGIACNTAGGSHHARRAQGAGFCTFNDVAVAALMLLAEGAAHNILVIDLDVHQGDGT 163
Query: 207 EKDFSSDSRVYILDMFNPGIYPRDYEARRFI-DQKVEVVSGTTTNEYLKKLDEALEVAGH 265
+ R + M R+Y R+ D V + GT YL++L L
Sbjct: 164 ADILGDEPRAFTFSMHG----DRNYPVRKIASDLDVALPDGTGDAAYLERLAAILPELSA 219
Query: 266 TFDPELVIYNAGTDILEGDPLGMLKVK 292
++V YNAG D+ D LG L +
Sbjct: 220 MRHWDIVFYNAGVDVHAQDRLGRLALS 246
>gi|399008851|ref|ZP_10711308.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM17]
gi|398114713|gb|EJM04517.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM17]
Length = 306
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 119/261 (45%), Gaps = 20/261 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G ++ P +E L + H
Sbjct: 3 LPLIYHEDYSPEF---PAEHRFPMDKFRLLRDHLVDSGLTRDADLLRPELCPREILALAH 59
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
Y++ + S + +P + L +R V + VGG++LAA+ A E G
Sbjct: 60 DPGYIERYMAGELSREDQRRLGLP----WNEALARRTV-----RAVGGSLLAAEQALEHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A ++ GG HH D GFC + D+++ HY + RV+I D D HQG+G +
Sbjct: 111 LACHLAGGTHHAHYDHPAGFCIFNDLAVISHYLLEAGRVGRVLIFDCDVHQGDGTARILE 170
Query: 212 SDSRVYILDMFNPGIYPRDYEARRF-IDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPE 270
+ + +P AR+ D + + G +YLK +D+AL + P+
Sbjct: 171 HTPDAVTVSLHCEKNFP----ARKASSDWDIPLPMGMGDADYLKVVDDALNYLLPLYQPD 226
Query: 271 LVIYNAGTDILEGDPLGMLKV 291
LV+Y+AG D+ + D LG LK+
Sbjct: 227 LVLYDAGVDVHQDDALGYLKL 247
>gi|300703916|ref|YP_003745518.1| histone deacetylase [Ralstonia solanacearum CFBP2957]
gi|299071579|emb|CBJ42903.1| Histone deacetylase [Ralstonia solanacearum CFBP2957]
Length = 324
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 115/247 (46%), Gaps = 25/247 (10%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSS---PNVSI 110
H F K+ + + +++E + + E A + LL+ H+ Y+ ++ + P
Sbjct: 19 HRFPMRKYSLLRERIAAE--VPGLVLHEAPRAGDDALLLAHAPDYVHAVGAGKLDPARQR 76
Query: 111 IIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGG 170
I P + + +V+R R+ G T+ A + A G A+N+ GG HH AD+GGG
Sbjct: 77 EIGFP----WSSAMVERS-----RRSAGATMAACEAAMADGTAVNLAGGTHHAYADKGGG 127
Query: 171 FCAYADISLCIHYAFVQLNISR------VMIIDLDAHQGNGHEKDFSSDSRVYILDMFNP 224
FC + D ++ + +Q R V I+DLD HQGNG D+ V+ L +
Sbjct: 128 FCVFNDAAIASRW--MQRRPGRAPEDFPVAIVDLDVHQGNGTASILRDDASVFTLSLHGE 185
Query: 225 GIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGD 284
YP E D V + G YL+ L AL+ F P L+IY AG D EGD
Sbjct: 186 KNYPFRKEVS---DLDVGLPDGCGDAAYLEALAGALDTLAARFAPRLIIYLAGADPHEGD 242
Query: 285 PLGMLKV 291
LG LK+
Sbjct: 243 RLGRLKL 249
>gi|332291650|ref|YP_004430259.1| histone deacetylase [Krokinobacter sp. 4H-3-7-5]
gi|332169736|gb|AEE18991.1| Histone deacetylase [Krokinobacter sp. 4H-3-7-5]
Length = 300
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 107/244 (43%), Gaps = 25/244 (10%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ + + L EG ++ EP+E E ++ H+ Y++SL++ +
Sbjct: 18 HRFPMEKYDLLPKQLVYEGTCTEDNFFEPVEVDNEHIVRCHTTEYVESLKA-------LT 70
Query: 114 VPPVALFPNCLVQRKVLYPFRKQV--------GGTILAAKLAKERGWAINVGGGFHHCSA 165
+ P A QRK +P +++ GTI A E G A+N+ GG HH
Sbjct: 71 IDPRA-------QRKTGFPLSQELVDRELIITQGTIDGCHYALENGIAMNIAGGTHHAYT 123
Query: 166 DEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
D G FC D ++ Y +++I+DLD HQGNG + F+ D V+ M
Sbjct: 124 DHGEAFCLLNDQAIAARYLQANELAKKILIVDLDVHQGNGTAEIFTGDDSVFTFSMHGKA 183
Query: 226 IYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDP 285
YP E D + + + T EYL L + L P+ + Y G DIL D
Sbjct: 184 NYPFRKEIS---DLDIALETDTGDAEYLDILKKTLPNLIKEQQPDFIFYLCGVDILASDK 240
Query: 286 LGML 289
LG L
Sbjct: 241 LGKL 244
>gi|410030521|ref|ZP_11280351.1| deacetylase [Marinilabilia sp. AK2]
Length = 300
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 112/240 (46%), Gaps = 13/240 (5%)
Query: 52 KLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSII 111
K H F K+ + + L EG ++ EP S+E ++ H +Y + L+S +S+
Sbjct: 16 KGHRFPMEKYNLLPEQLLYEGTVNSCNFFEPEALSREWIVNTHKSAYFEKLES---LSLS 72
Query: 112 IEVPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGG 169
FP LV+R++ + G++ AA A E G A+N+ GG HH D G
Sbjct: 73 KSEIRKTGFPLSKALVEREI-----HIMHGSVQAALFALEYGVAMNIAGGTHHAFTDRGE 127
Query: 170 GFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPR 229
GFC DI++ +Y +++++DLD HQGNG + F + +V+ M YP
Sbjct: 128 GFCLLNDIAITANYLLENNLAKQILVVDLDVHQGNGTAEIFRKEPKVFTFSMHGASNYPM 187
Query: 230 DYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGML 289
E D + + YL+ LD LE P+ +I+ +G D+L D LG L
Sbjct: 188 HKEKS---DLDIGLPDHADDATYLELLDTHLEPLMDKVAPDFIIFQSGVDVLASDKLGRL 244
>gi|408479141|ref|ZP_11185360.1| putative histone deacetylase family protein [Pseudomonas sp. R81]
Length = 306
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 120/261 (45%), Gaps = 20/261 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G + + ++ P E L + H
Sbjct: 3 LPLIYHDDYSPEF---PADHRFPMDKFRLLRDHLVDSGLTEDSQLLRPQLCPPEILALAH 59
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
Y++ S + +P + L +R V + VGG+ILAA+ A + G
Sbjct: 60 DAGYIERYMGGELSREDQRRLGLP----WNEALARRTV-----RAVGGSILAAEQALDHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A ++ GG HH D GFC + D+++ HY ++RV+I D D HQG+G +
Sbjct: 111 LACHLAGGTHHAHYDYPAGFCIFNDLAVISHYLLASGRVNRVLIFDCDVHQGDGTARILH 170
Query: 212 SDSRVYILDMFNPGIYPRDYEARRF-IDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPE 270
+ + +P AR+ D + + G +YLK +D+AL + P+
Sbjct: 171 DTPDAITVSLHCEKNFP----ARKAQSDWDIPLPMGMGDADYLKVVDDALNYLLPLYQPD 226
Query: 271 LVIYNAGTDILEGDPLGMLKV 291
LV+Y+AG D+ + D LG LK+
Sbjct: 227 LVLYDAGVDVHKDDALGYLKL 247
>gi|427735530|ref|YP_007055074.1| deacetylase [Rivularia sp. PCC 7116]
gi|427370571|gb|AFY54527.1| deacetylase, histone deacetylase/acetoin utilization protein
[Rivularia sp. PCC 7116]
Length = 305
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 121/266 (45%), Gaps = 30/266 (11%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LP+IY PDY + H F K+ + + L S+G D P ++E + +VH
Sbjct: 3 LPIIYHPDY---VTPLPDAHRFPMPKFRLLYELLLSDGVADLQQFHIPKRPNQEAIELVH 59
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQ--------VGGTILAAKL 146
++ ++ + + QR++ P+ Q VGGTILAAKL
Sbjct: 60 TKEFVNGYLNGTL--------------DTKAQRRIGLPWSPQLVNRTCTAVGGTILAAKL 105
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNIS-RVMIIDLDAHQGNG 205
A +G A N GG HH G GFC + D ++ +LN++ +++I+DLD HQG+G
Sbjct: 106 ALSKGLACNTAGGTHHAFPSYGSGFCIFNDFAIATR-VIQKLNLAQKILIVDLDVHQGDG 164
Query: 206 HEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGH 265
F D V+ M +P + D V + G + YL+ L + L
Sbjct: 165 TAFIFQDDDSVFTFSMHCEVNFPGRKQKS---DLDVPLPEGMEDDAYLQTLAKYLPDLLV 221
Query: 266 TFDPELVIYNAGTDILEGDPLGMLKV 291
P+LV+++AG D GD LG L +
Sbjct: 222 DVKPDLVLFDAGVDPHIGDKLGKLAL 247
>gi|407368493|ref|ZP_11115025.1| histone deacetylase superfamily protein [Pseudomonas mandelii JR-1]
Length = 306
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 121/261 (46%), Gaps = 20/261 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G ++ P E L + H
Sbjct: 3 LPLIYHEDYSPEF---PADHRFPMDKFRLLRDHLVDSGLTRDADLLRPELCPPEILALAH 59
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
+Y++ S S + +P + L +R V + VGG++LAA+ A E G
Sbjct: 60 DAAYIERYMSGELSREDQRRLGLP----WSEALARRTV-----RAVGGSLLAAEQALEHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A ++ GG HH D GFC + D+++ H+ ++RV+I D D HQG+G +
Sbjct: 111 LACHLAGGTHHAHYDYPAGFCIFNDLAVISHFLLESGRVNRVLIFDCDVHQGDGTARILH 170
Query: 212 SDSRVYILDMFNPGIYP-RDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPE 270
+ + + +P R E+ D + + G +YLK +D+AL + P+
Sbjct: 171 NTPEAVTVSLHCEKNFPARKAES----DWDIPLPKGMGDADYLKVVDDALNYLLPLYQPD 226
Query: 271 LVIYNAGTDILEGDPLGMLKV 291
LV+Y+AG D+ + D LG LK+
Sbjct: 227 LVLYDAGVDVHKDDALGYLKL 247
>gi|357027929|ref|ZP_09089984.1| Deacetylase [Mesorhizobium amorphae CCNWGS0123]
gi|355540174|gb|EHH09395.1| Deacetylase [Mesorhizobium amorphae CCNWGS0123]
Length = 300
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 119/269 (44%), Gaps = 30/269 (11%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
L +++ PDYD F H F SK+ + + LS+ G + P A L +
Sbjct: 1 MSLQIVHHPDYDAGF---AVNHRFPMSKYPLLMEALSTRGLARPGTLNLPEPAPAYWLKL 57
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYP------FRKQV--GGTILAA 144
H+ Y++ + + EVP ++R++ +P R Q+ GGT+ AA
Sbjct: 58 AHAPDYVEQV-------LACEVPET-------IEREIGFPVGPRVSLRAQLATGGTVQAA 103
Query: 145 KLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
+LA + G A N GG HH +G GFC + D+++ + + ++++DLD HQG+
Sbjct: 104 RLALQHGIACNAAGGSHHARRAQGAGFCTFNDVAVASLVLLAEGAVQNILVVDLDVHQGD 163
Query: 205 GHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQ-KVEVVSGTTTNEYLKKLDEALEVA 263
G + R + M R+Y R+ + + GT YL++L L
Sbjct: 164 GTADILKDEPRAFTFSMHG----DRNYPVRKIASSLDIALPDGTGDTAYLERLAGILPEL 219
Query: 264 GHTFDPELVIYNAGTDILEGDPLGMLKVK 292
++V YNAG D+ D LG L +
Sbjct: 220 SARARWDIVFYNAGVDVHAEDRLGRLALS 248
>gi|406707601|ref|YP_006757953.1| histone deacetylase family protein [alpha proteobacterium HIMB59]
gi|406653377|gb|AFS48776.1| histone deacetylase family protein [alpha proteobacterium HIMB59]
Length = 298
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 125/261 (47%), Gaps = 20/261 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+ + Y PDYDI + H F SK+ + L S+ F K + +P A E L H
Sbjct: 1 MHIFYHPDYDIP---VPSTHRFVGSKFSDLYNHLQSQSFASKLKVGQPTPAPMERLTRAH 57
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
Y++ + S +I +P + L R L + GT L A+ A + G
Sbjct: 58 FSLYIEKVSQDELSKEDLRLINLP----WSERLRNRSFL-----AIEGTYLTARQALKSG 108
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A +VGGG HH + G GFC + D+ + ++ +V+I+DLD HQG+G
Sbjct: 109 VACHVGGGTHHAHHNHGLGFCVFNDLGYTAKNLIAEGHVEKVLILDLDVHQGDGTIDICQ 168
Query: 212 SDSRVYILDMFNPGIYPRDYEARR-FIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPE 270
D R++ + + +P +E ++ ++D + + +GT YL L + L+ + P+
Sbjct: 169 GDPRIFTCSIHSESNFP--FEKKQGWMD--IGLPAGTKDEAYLDTLIQTLQSIERSLTPD 224
Query: 271 LVIYNAGTDILEGDPLGMLKV 291
LV+++AG D+ D LG L++
Sbjct: 225 LVLFDAGIDVYSEDGLGNLEL 245
>gi|428207541|ref|YP_007091894.1| histone deacetylase [Chroococcidiopsis thermalis PCC 7203]
gi|428009462|gb|AFY88025.1| Histone deacetylase [Chroococcidiopsis thermalis PCC 7203]
Length = 305
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 119/263 (45%), Gaps = 24/263 (9%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPL+Y PDY + + H F K+ + + L ++G P + + +VH
Sbjct: 3 LPLVYHPDYVVP---LPDTHRFPMPKFQLLYELLIADGVAYPEQFQIPERPPQAWIELVH 59
Query: 95 SESYLK-----SLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
Y++ +L + I + P C+ VGGT+L AKLA E
Sbjct: 60 LPEYVQAYCTGTLDAKAQRRIGLPWSPALANRTCVA-----------VGGTVLTAKLALE 108
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISR-VMIIDLDAHQGNGHEK 208
G A N GG HH G GFC + D+++ +LN+ R V+I+DLD HQG+G
Sbjct: 109 CGLACNTAGGTHHAFPSYGSGFCIFNDLAIATR-VLQELNLVRKVLIVDLDVHQGDGTAF 167
Query: 209 DFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFD 268
F +D V+ M +P ++ D V + G +EYL+ L + L
Sbjct: 168 IFQNDPSVFTFSMHCEINFP---GTKQKSDLDVPLPEGMEDDEYLQTLAQYLPDLLSRIQ 224
Query: 269 PELVIYNAGTDILEGDPLGMLKV 291
P+LV+Y+AG D GD LG L +
Sbjct: 225 PDLVLYDAGVDPHIGDRLGKLAL 247
>gi|358637882|dbj|BAL25179.1| histone deacetylase family protein [Azoarcus sp. KH32C]
Length = 329
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 112/249 (44%), Gaps = 27/249 (10%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ R+ L++ G ++ + P AS ++L H YL S
Sbjct: 30 HRFPMEKYSRLRARLAASGHFGESDFIVPTAASDTEILRAHDAGYLSRAASG-------R 82
Query: 114 VPPVALFPNCLVQRKVLYPF--------RKQVGGTILAAKLAKERGWAINVGGGFHHCSA 165
+ P QR++ +P+ R+ G T+ A + A G + N+ GG HH
Sbjct: 83 LEPAE-------QRRIGFPWTPQMIERSRRSAGATLAACRRALTEGCSANLAGGTHHAHR 135
Query: 166 DEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
D G GFC + D ++ + +V ++D D HQG+G + ++ L +
Sbjct: 136 DFGSGFCVFNDAAIAALAMQAEGLARKVAVVDCDVHQGDGTATILAGRRDLFTLSLHGAK 195
Query: 226 IYPRDYEARRFI-DQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGD 284
+P R+ + D VE+ GT + YL L++AL F+P+LVIY AG D EGD
Sbjct: 196 NFP----FRKAVSDLDVELPDGTGDSAYLAALNDALSDLFSRFEPDLVIYLAGADPFEGD 251
Query: 285 PLGMLKVKW 293
LG L + +
Sbjct: 252 RLGRLALTF 260
>gi|343086372|ref|YP_004775667.1| histone deacetylase superfamily protein [Cyclobacterium marinum DSM
745]
gi|342354906|gb|AEL27436.1| histone deacetylase superfamily [Cyclobacterium marinum DSM 745]
Length = 300
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 110/238 (46%), Gaps = 13/238 (5%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ + + L EG L ++ EP +E + +H YL+ L+ +S+
Sbjct: 18 HRFPMEKYDLLPEQLLYEGTLYEDNFFEPEPCQEEVITAIHESLYLEKLKG---LSLSKS 74
Query: 114 VPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGF 171
FP LV+R++ + + G+++A+ A + G +N+ GG HH D G GF
Sbjct: 75 EIRRTGFPLSKELVEREI-----QIMNGSVMASLFALKDGIGMNIAGGTHHAFKDRGEGF 129
Query: 172 CAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDY 231
C DI++ + + I +V+++DLD HQGNG F +D V+ M YP
Sbjct: 130 CLLNDIAIAAKFLLTKNEIDKVLVVDLDVHQGNGTASIFENDPEVFTFSMHGKHNYPMHK 189
Query: 232 EARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGML 289
E D V + T YL L+ L P+ +IY +G D+L D LG L
Sbjct: 190 EKS---DLDVPLEDQTDDQTYLSLLESHLPKLITRVAPDFIIYQSGVDVLATDKLGRL 244
>gi|334132984|ref|ZP_08506739.1| hypothetical protein METUNv1_03832 [Methyloversatilis universalis
FAM5]
gi|333441894|gb|EGK69866.1| hypothetical protein METUNv1_03832 [Methyloversatilis universalis
FAM5]
Length = 300
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 115/246 (46%), Gaps = 15/246 (6%)
Query: 48 LGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPN 107
L + + H F +K+ ++ + +++E L + EP A+ +L H Y+ ++S
Sbjct: 11 LPLPETHRFPMAKYRQLRERVAAE--LPDVDLREPAAATDAELCRAHDAGYVD--RASRG 66
Query: 108 VSIIIEVPPVALFPNC--LVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSA 165
+ E+ + FP +++R R+ G T+ A + A G ++N+ GG HH
Sbjct: 67 ELSVNEIRTIG-FPWSPEMIERS-----RRSAGATMSACRSALREGVSVNLAGGTHHAKH 120
Query: 166 DEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
G G+C + D ++ + I+RV I+DLD HQG+G V+ L +
Sbjct: 121 ASGAGYCVFNDAAVATCMLQAECGIARVAIVDLDVHQGDGTADILGDADDVFTLSLHGDR 180
Query: 226 IYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDP 285
+P E V + GT YL LD+AL F+P+ VIY AG D EGD
Sbjct: 181 NFPFRKEVSHL---DVALPDGTGDQAYLAALDQALATMSRRFEPQFVIYLAGADPFEGDR 237
Query: 286 LGMLKV 291
LG LK+
Sbjct: 238 LGRLKL 243
>gi|89073475|ref|ZP_01159998.1| histone deacetylase/AcuC/AphA family protein [Photobacterium sp.
SKA34]
gi|89050739|gb|EAR56220.1| histone deacetylase/AcuC/AphA family protein [Photobacterium sp.
SKA34]
Length = 302
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 124/268 (46%), Gaps = 33/268 (12%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY Y S L + + H + +K+ + + + K I +P+ + + +H
Sbjct: 2 LPLIYHSQY--SALTLPEKHRYPINKYRLLFEAVFHSELRKKVSIHQPIRSDIAKIKAIH 59
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTILAAKL 146
Y+ L + +P + R++ +P+ Q+ GGT L L
Sbjct: 60 DSEYVDDL-------LFNRLPAAKM-------RRIGFPWSDQLITRTLLSTGGTQLTVDL 105
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
A E G AI++ GG+HH D G GFC + D+++ +A +I +VMIID D H G+G
Sbjct: 106 ALEHGIAIHLSGGYHHAHHDFGSGFCLFNDLAIAAKHALSYSHIDKVMIIDCDVHHGDGT 165
Query: 207 EKDFSSDSRVYILDMFNPGIYPRDYEARR---FIDQKVEVVSGTTTNEYLKKLDEALEVA 263
++D + + +P AR+ ID +E T+T++YL L L +
Sbjct: 166 ATLLANDPNIITFSVHCDKNFP----ARKPDSDIDLALE--RNTSTDDYLAALQGILPLL 219
Query: 264 GHTFDPELVIYNAGTDILEGDPLGMLKV 291
P+LVIY+AG DI + D LG +
Sbjct: 220 LAQHQPDLVIYDAGVDIHQHDELGYFDI 247
>gi|220908103|ref|YP_002483414.1| histone deacetylase superfamily protein [Cyanothece sp. PCC 7425]
gi|219864714|gb|ACL45053.1| histone deacetylase superfamily [Cyanothece sp. PCC 7425]
Length = 305
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 117/263 (44%), Gaps = 20/263 (7%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LPL+Y P+Y + + H F K+ R+ L +EG P ++ L
Sbjct: 1 MALPLVYHPNYGVP---LPPGHRFPMLKFCRLYDLLLAEGIASPAQFHLPALPAQNWLEQ 57
Query: 93 VHSESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
VH +Y++S S V I +P + LV R VGGTIL A+LA
Sbjct: 58 VHEPTYIQSYSDGTLSEKVLRRIGLP----WSEALVHRT-----WTAVGGTILTAQLAFS 108
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNIS-RVMIIDLDAHQGNGHEK 208
G A N GG HH D G GFC + D+++ L ++ +++IIDLD HQG+G
Sbjct: 109 HGLACNTAGGTHHAFPDYGSGFCIFNDLAIAAR-TVQHLGLAHKILIIDLDVHQGDGTAF 167
Query: 209 DFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFD 268
F DS V+ M +P ++ D V + G YL L L
Sbjct: 168 IFRHDSSVFTFSMHCQANFP---ATKQQSDLDVPLPVGMEDQPYLHTLSLHLSDLLSQVK 224
Query: 269 PELVIYNAGTDILEGDPLGMLKV 291
P+LV+Y+AG D GD LG L +
Sbjct: 225 PDLVLYDAGVDPHWGDRLGKLAL 247
>gi|421141919|ref|ZP_15601898.1| Histone deacetylase superfamily protein [Pseudomonas fluorescens
BBc6R8]
gi|404506939|gb|EKA20930.1| Histone deacetylase superfamily protein [Pseudomonas fluorescens
BBc6R8]
Length = 306
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 120/261 (45%), Gaps = 20/261 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G + ++ P E L + H
Sbjct: 3 LPLIYHDDYSPEF---PADHRFPMDKFRLLRDHLVESGLTRDSQLLRPELCPAEILALAH 59
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
Y++ + S + +P + L +R V + VGG++LAA+ A E G
Sbjct: 60 EPGYIERYMNGELSREDQRRLGLP----WSEALARRTV-----RAVGGSLLAAEQALEHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A ++ GG HH D GFC + D+++ HY ++RV+I D D HQG+G +
Sbjct: 111 LACHLAGGTHHAHYDYPAGFCIFNDLAVISHYLLASGRVNRVLIFDCDVHQGDGTARILH 170
Query: 212 SDSRVYILDMFNPGIYPRDYEARRF-IDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPE 270
+ + +P AR+ D + + G +YLK +D+AL + P+
Sbjct: 171 DTPDAITVSLHCEKNFP----ARKAQSDWDIPLPMGMGDADYLKVVDDALNYLLPLYQPD 226
Query: 271 LVIYNAGTDILEGDPLGMLKV 291
LV+Y+AG D+ + D LG LK+
Sbjct: 227 LVLYDAGVDVHKDDALGYLKL 247
>gi|93006940|ref|YP_581377.1| histone deacetylase superfamily protein [Psychrobacter
cryohalolentis K5]
gi|92394618|gb|ABE75893.1| histone deacetylase superfamily [Psychrobacter cryohalolentis K5]
Length = 305
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 122/260 (46%), Gaps = 22/260 (8%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
L + YS DI + + H F K+ I + L +E + N P S++++L H
Sbjct: 2 LKIAYS---DIFRYSVPEKHRFPMQKYTMIPERLLAEKTISANNFFAPTRLSEDEILTTH 58
Query: 95 SESYLKSL--QSSPNV---SIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
+ Y L Q+ P +I E+ P LV+R R T A A++
Sbjct: 59 TADYWYQLKTQTLPRKEARAIGFEMTPE------LVERG-----RYIAHATYECALYAQQ 107
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKD 209
G A+NV GG HH +D G GFC + D+ + + + +++++DLD HQGNG+
Sbjct: 108 YGVAMNVAGGTHHAFSDHGEGFCVFNDVCIASNLLLNRGQAQKILVVDLDVHQGNGNASI 167
Query: 210 FSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDP 269
+++ RV+I M YP ++ D +E+ + T +YL+ L++ L P
Sbjct: 168 MANEPRVFIFSMHGAKNYPF---RKQVSDLDIELDNDTGDEQYLQILEDTLPRLISDVAP 224
Query: 270 ELVIYNAGTDILEGDPLGML 289
+++ Y + D+L D LG L
Sbjct: 225 DMIFYQSAVDVLATDKLGKL 244
>gi|429330586|ref|ZP_19211372.1| histone deacetylase superfamily protein [Pseudomonas putida CSV86]
gi|428764696|gb|EKX86825.1| histone deacetylase superfamily protein [Pseudomonas putida CSV86]
Length = 304
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 123/262 (46%), Gaps = 18/262 (6%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
+LPL+Y DY F H F K+ + L + G + P + L +
Sbjct: 1 MRLPLVYHDDYSPEF---PAGHRFPMDKFRLLHDHLIASGLTTDAELHRPDICPNDILAL 57
Query: 93 VHSESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
H +Y++ + S + +P + L +R V + VGG++LAA+LA +
Sbjct: 58 AHDRAYIERYMNGELSREDQRRLGLP----WSEALARRTV-----RAVGGSLLAAELALQ 108
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKD 209
G A ++ GG HH D GFC + D+++ HY + RV+I D D HQG+G +
Sbjct: 109 HGIACHLAGGTHHAHYDHPAGFCIFNDLAVISHYLLEAGRVHRVLIFDCDVHQGDGTARI 168
Query: 210 FSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDP 269
+ + + +P +AR D + + G +EYLK +D+AL + P
Sbjct: 169 LEHTADAITVSLHCEQNFPV-RKARS--DWDIPLHRGMGDSEYLKIVDDALNYLLPLYQP 225
Query: 270 ELVIYNAGTDILEGDPLGMLKV 291
+LV+Y+AG D+ + D LG L++
Sbjct: 226 DLVLYDAGVDVHKDDALGYLQL 247
>gi|117618465|ref|YP_857293.1| histone deacetylase/AcuC/AphA family protein [Aeromonas hydrophila
subsp. hydrophila ATCC 7966]
gi|117559872|gb|ABK36820.1| histone deacetylase/AcuC/AphA family protein [Aeromonas hydrophila
subsp. hydrophila ATCC 7966]
Length = 319
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 127/262 (48%), Gaps = 19/262 (7%)
Query: 32 IFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLL 91
+ L + Y P Y S L + H F +K+ + + L S G+ + E A+ E +
Sbjct: 21 VMSLRIFYHPLY--SALTLPARHRFPLAKYQALFERLGSLGY----PLAEAAPATPEQIK 74
Query: 92 VVHSESYLKS-LQSSPNVSIIIEVPPVALFP-NCLVQRKVLYPFRKQVGGTILAAKLAKE 149
VH +Y+++ L + + I ++ FP + L+ + L + VG T+ A++ A E
Sbjct: 75 RVHDAAYVEAALAGTLDADAIRQLG----FPWSPLLMERTL----RSVGATLAASRHALE 126
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKD 209
+G + + GG+HH D G GFC + D+ + + +V+I+DLD HQG+G
Sbjct: 127 QGCGLQISGGYHHAHRDVGSGFCLFNDLVIAAQVCLDEGRCEQVLIVDLDVHQGDGSAAL 186
Query: 210 FSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDP 269
+ L + +PR Y+ +D + SG + YL L EAL +A + P
Sbjct: 187 CQGRRDIITLSLHGEHNFPR-YKPASHMD--FPLPSGMADDAYLTTLAEALNLALRLYAP 243
Query: 270 ELVIYNAGTDILEGDPLGMLKV 291
+L++Y AG D+ + D LG L +
Sbjct: 244 DLILYQAGVDVHKDDELGYLAL 265
>gi|390363404|ref|XP_784008.3| PREDICTED: uncharacterized protein SYNPCC7002_A1628-like
[Strongylocentrotus purpuratus]
Length = 262
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 102/210 (48%), Gaps = 9/210 (4%)
Query: 82 PLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTI 141
P+ +K++L+ VH+E Y++ + V + LV R R + GGTI
Sbjct: 4 PVHVTKDELIRVHTEEYIEKFFEGKTSAKEQRVTGFT-WSEGLVSR-----CRYETGGTI 57
Query: 142 LAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAH 201
LAA+LA RG N GGG HH + G GFC D+++ + + RV+IIDLD H
Sbjct: 58 LAAELALGRGLVCNTGGGTHHAFPEHGAGFCLLNDMAVAASLMVHRGKVDRVLIIDLDVH 117
Query: 202 QGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALE 261
QG+ F D V+ L + YP + D V V GT ++Y++ + + +
Sbjct: 118 QGDATALIFQEDPSVFTLSVHCGKNYPLKKQQS---DLDVSVDRGTGDDDYMRIIQDHIP 174
Query: 262 VAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
F P LV ++AG D + D LG L++
Sbjct: 175 SVLTNFRPGLVFFDAGVDPHKDDALGYLEL 204
>gi|344202956|ref|YP_004788099.1| histone deacetylase [Muricauda ruestringensis DSM 13258]
gi|343954878|gb|AEM70677.1| Histone deacetylase [Muricauda ruestringensis DSM 13258]
Length = 300
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 101/246 (41%), Gaps = 25/246 (10%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ + Q L EG ++ EP + H E Y K L
Sbjct: 18 HRFPMIKYELLPQQLIHEGTCTEHNFFEPGLPEDHHIFAAHDEVYFKDL----------- 66
Query: 114 VPPVALFPNCLVQRKVLYPFRKQV--------GGTILAAKLAKERGWAINVGGGFHHCSA 165
V L + RK+ +P ++ GTI A E G ++N+ GG HH +
Sbjct: 67 ---VDLNLSKSAVRKIGFPLSDELVLRERIIADGTIKGCDFALEHGISMNIAGGTHHAYS 123
Query: 166 DEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
D G FC D ++ Y +++I+DLD HQGNG + F +D V+ M G
Sbjct: 124 DRGEAFCMLNDQAIGARYLLNNELAKKILIVDLDVHQGNGTAEIFKTDHSVFTFSMHGNG 183
Query: 226 IYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDP 285
YP E D + + GTT EYL L L P+ + Y G D+LE D
Sbjct: 184 NYPFKKEIS---DLDIPLEKGTTDQEYLSLLKNTLPELLEQVQPDFIFYLCGVDVLESDK 240
Query: 286 LGMLKV 291
LG L +
Sbjct: 241 LGTLSM 246
>gi|434405446|ref|YP_007148331.1| deacetylase, histone deacetylase/acetoin utilization protein
[Cylindrospermum stagnale PCC 7417]
gi|428259701|gb|AFZ25651.1| deacetylase, histone deacetylase/acetoin utilization protein
[Cylindrospermum stagnale PCC 7417]
Length = 305
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 122/261 (46%), Gaps = 20/261 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LP+IY DY + H F SK+ ++ + L ++G + P +++ + +VH
Sbjct: 3 LPIIYHSDY---IAPLPPGHRFPMSKFRQLYELLLADGVAHQEQFYAPERPTQDLIELVH 59
Query: 95 SESYLKSLQSS---PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
+ +Y+++ P I +P + LV R + VGGTIL AKLA G
Sbjct: 60 TPNYVQAYCEGTLEPKAQRRIGLP----WSPALVNRTCV-----AVGGTILTAKLALSHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNI-SRVMIIDLDAHQGNGHEKDF 210
A N GG HH G GFC + D+++ QL I +++++DLD HQG+G F
Sbjct: 111 LACNTAGGTHHAFPGYGSGFCIFNDLAIASR-VLQQLGIVQKILVVDLDVHQGDGTAFIF 169
Query: 211 SSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPE 270
D V+ M +P ++ D V + G + YL+ L + L P+
Sbjct: 170 QDDKSVFTFSMHCEVNFP---GTKQNSDLDVPLTEGMEDDVYLQTLAQYLPDLLSDVKPD 226
Query: 271 LVIYNAGTDILEGDPLGMLKV 291
LV+Y+AG D GD LG L +
Sbjct: 227 LVLYDAGVDPHIGDRLGKLAL 247
>gi|427732319|ref|YP_007078556.1| deacetylase [Nostoc sp. PCC 7524]
gi|427368238|gb|AFY50959.1| deacetylase, histone deacetylase/acetoin utilization protein
[Nostoc sp. PCC 7524]
Length = 305
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 117/260 (45%), Gaps = 18/260 (6%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LP+IY PDY + + H F K+ ++ + L +EG P + E + +VH
Sbjct: 3 LPIIYHPDY---VAPLPEGHRFPMPKFQKLYELLLTEGVAHLEQFHTPTRPNSELIELVH 59
Query: 95 SESYLKSLQSS---PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
+ Y++ P I +P + L R + VGGTIL A+LA +G
Sbjct: 60 TPDYVQGYCEGTLDPKAQRRIGLP----WSPALANRTCV-----AVGGTILTAQLALSQG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A N GG HH G GFC + D+++ Q + +++I+DLD HQG+G F
Sbjct: 111 LACNTAGGTHHAFPCYGSGFCIFNDLAIASRVLQKQGLVQKILIVDLDVHQGDGTAFIFQ 170
Query: 212 SDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPEL 271
D V+ M +P ++ D V + G + YL+ L L P+L
Sbjct: 171 DDDSVFTFSMHCEVNFP---GTKQQSDLDVPLPVGMEDDAYLQTLASYLPDLLSEVKPDL 227
Query: 272 VIYNAGTDILEGDPLGMLKV 291
V+Y+AG D GD LG L +
Sbjct: 228 VLYDAGVDPHIGDRLGKLAL 247
>gi|344167758|emb|CCA80001.1| Histone deacetylase [blood disease bacterium R229]
Length = 324
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 104/218 (47%), Gaps = 19/218 (8%)
Query: 81 EPLEASKEDLLVVHSESYLKSLQSS---PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV 137
E A + LL+VH+ Y+ ++ + P I P + +V+R R+
Sbjct: 44 EAPRAGDDALLLVHAPDYVSAVGAGRLDPARQREIGFP----WSLAMVERS-----RRSA 94
Query: 138 GGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNIS----RV 193
G T+ A + A G A+N+ GG HH AD+GGGFC + D ++ + + + V
Sbjct: 95 GATMAACEAAMTDGIAVNLAGGTHHAYADKGGGFCVFNDAAIASRWIQRRPGWTPDGFPV 154
Query: 194 MIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYL 253
I+DLD HQGNG +D+ V+ L + YP EA D V + G YL
Sbjct: 155 AIVDLDVHQGNGTASILRNDASVFTLSVHGEKNYPFRKEAS---DLDVGLPDGCGDEAYL 211
Query: 254 KKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ L AL+ F P L+IY AG D EGD LG LK+
Sbjct: 212 EALAGALDTLAARFAPRLIIYLAGADPHEGDRLGRLKL 249
>gi|163802804|ref|ZP_02196693.1| histone deacetylase/AcuC/AphA family protein [Vibrio sp. AND4]
gi|159173344|gb|EDP58167.1| histone deacetylase/AcuC/AphA family protein [Vibrio sp. AND4]
Length = 307
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 124/271 (45%), Gaps = 35/271 (12%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNC------IVEPLEASKE 88
LPLIY P Y S L + K H + K+ + Q + + L C +P S +
Sbjct: 2 LPLIYHPIY--SQLDLPKGHRYPIMKYHHLYQAVEQKRAL--GCWGRQVEFFQPTSLSVD 57
Query: 89 DLLVVHSESYLKSLQSSPNVSIIIEVPPVAL----FP--NCLVQRKVLYPFRKQVGGTIL 142
++ VHSE Y+ L S +P + FP L+ R + GT+L
Sbjct: 58 EVKRVHSEEYVDLLVSGA-------IPAAKMRRIGFPWSEALITRTL-----TSTAGTVL 105
Query: 143 AAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQ 202
A+ A E G A+++ GG+HH D G GFC + D+++ I +VMIID D H
Sbjct: 106 TAEKALEHGIAVHLSGGYHHAHKDFGSGFCLFNDLAIAAKRMLGHELIDKVMIIDSDVHH 165
Query: 203 GNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNE--YLKKLDEAL 260
G+G +S + L +P R D ++V G TN+ +L+ E +
Sbjct: 166 GDGTATLCQDESDIITLSFHCDKNFP-----ARKPDSDLDVPLGRGTNDETFLEAFKEVV 220
Query: 261 EVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
E+A + P++VIY+AG DI D LG KV
Sbjct: 221 EMAVNIHRPDMVIYDAGVDIHTDDELGYFKV 251
>gi|423206155|ref|ZP_17192711.1| hypothetical protein HMPREF1168_02346 [Aeromonas veronii AMC34]
gi|404622660|gb|EKB19521.1| hypothetical protein HMPREF1168_02346 [Aeromonas veronii AMC34]
Length = 298
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 122/259 (47%), Gaps = 15/259 (5%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
L + Y P Y S L + + H F +K+ + + L + G+ + E A++E +
Sbjct: 1 MSLRIFYHPLY--SSLTLPERHRFPLAKYQGLFEQLQARGY----PLGEAPAATREQICR 54
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
+H Y+ + S I P L++R + + VG TI A++ A E+G
Sbjct: 55 IHDADYVAAALSGQLEDRAIRKIGFPWSP-MLMERTL-----RSVGATIAASRYAIEQGC 108
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
+ + GG+HH D G GFC + D+ + + +V+I+DLD HQG+G +
Sbjct: 109 GLQISGGYHHAHRDHGSGFCLFNDLVIAAQTCLDEGGCEQVLIVDLDVHQGDGSAALCTG 168
Query: 213 DSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELV 272
+ L + +P ++A +D + SG T + YL L +AL +A + P+L+
Sbjct: 169 RRDIITLSLHGEHNFPH-HKATSHLD--FPLPSGMTDDAYLTTLQQALSLALRLYSPDLI 225
Query: 273 IYNAGTDILEGDPLGMLKV 291
+Y AG D+ D LG L +
Sbjct: 226 LYQAGVDVHHADELGYLSL 244
>gi|396582606|gb|AFN88470.1| histone deacetylase [Aeromonas hydrophila]
Length = 319
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 123/263 (46%), Gaps = 21/263 (7%)
Query: 32 IFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLL 91
+ L + Y P Y S L + H F +K+ + + L S G+ + E A+ E +
Sbjct: 21 VMSLRIFYHPLY--SALALPARHRFPLAKYQALFERLGSLGY----PLAEAAPATPEQIK 74
Query: 92 VVHSESYLKS-LQSSPNVSIIIEVPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAK 148
VH +Y+++ L + + I ++ FP L++R + + VG T+ A++ A
Sbjct: 75 RVHDAAYVEAALAGTLDAGAIRQLG----FPWSPLLIERTL-----RSVGATLAASRHAL 125
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEK 208
E+G + + GG+HH D G GFC + D+ + + +V+I+DLD HQG+G
Sbjct: 126 EQGCGLQISGGYHHAHRDVGSGFCLFNDLVIAAQMCLDEGRCEQVLIVDLDVHQGDGSAA 185
Query: 209 DFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFD 268
+ + +PR A + SG + YL L EAL +A +
Sbjct: 186 LCQGRRDIITFSLHGEHNFPRHKPASHM---DFPLPSGMADDAYLTTLAEALNLALRLYT 242
Query: 269 PELVIYNAGTDILEGDPLGMLKV 291
P+L++Y AG D+ + D LG L +
Sbjct: 243 PDLILYQAGVDVHKDDELGYLAL 265
>gi|393770657|ref|ZP_10359135.1| histone deacetylase [Novosphingobium sp. Rr 2-17]
gi|392723764|gb|EIZ81151.1| histone deacetylase [Novosphingobium sp. Rr 2-17]
Length = 303
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 124/265 (46%), Gaps = 30/265 (11%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
L +++ P Y + +++ F K+ + + L G K + P +E L VH
Sbjct: 2 LHVVHHPGYVVE---TDRMGTFPHDKYALVMRVLGGSGETMK--VHAPEVMPREWLEAVH 56
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTILAAKL 146
+Y+ + I VP QR++ + +++ GGT LAAKL
Sbjct: 57 EPAYVDEV-------INCSVPAAK-------QRRIGFAIDERISRRSQLSPGGTWLAAKL 102
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
A + G+A N GG HH AD G G+C + D++L + + N+SR++I+DLD HQG+G
Sbjct: 103 ALQHGYAANSAGGSHHALADSGAGYCVFNDLALTANRLIAERNVSRILILDLDVHQGDGT 162
Query: 207 EKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHT 266
+ S ++ L + +P +AR +D V + T YL+ L +L +
Sbjct: 163 AALTAGRSDIFTLSIHAEKNFP-TRKARSSLD--VGLPDATGDAGYLEALAGSLPMVLDH 219
Query: 267 FDPELVIYNAGTDILEGDPLGMLKV 291
F PEL++ AG D D LG L +
Sbjct: 220 FVPELILLQAGVDAHTDDKLGRLSL 244
>gi|383763016|ref|YP_005441998.1| acetoin utilization protein AcuC [Caldilinea aerophila DSM 14535 =
NBRC 104270]
gi|381383284|dbj|BAM00101.1| acetoin utilization protein AcuC [Caldilinea aerophila DSM 14535 =
NBRC 104270]
Length = 303
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 124/262 (47%), Gaps = 18/262 (6%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
P++YSPD+ + + H F +K+G++ ++L +G + P A++ L +
Sbjct: 1 MTFPILYSPDH---VAPLPEGHRFPMAKFGKVYEWLIRDGVASLDQFHLPQPATEAQLAL 57
Query: 93 VHSESYLKS-LQSSPNVSIIIEVPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKE 149
H+ +Y+++ L+ + + + FP LV+R + +G T+LAA+LA
Sbjct: 58 AHNPAYIRAYLEGTLDARSRRRIG----FPWSERLVRRTL-----TALGSTVLAAELALT 108
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKD 209
G A + GG HH D G G+C + D+++ + Q RV+I+DLD HQG+G
Sbjct: 109 HGLACSTAGGTHHAFHDFGSGYCIFNDLAVAARWVKAQGLARRVLIVDLDVHQGDGTASI 168
Query: 210 FSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDP 269
+D + M +P E D V + +G EYL L + L P
Sbjct: 169 LQNDPDLVTFSMHCEANFPFHKERS---DYDVALPAGMEDEEYLAVLAQWLPDLLMQVRP 225
Query: 270 ELVIYNAGTDILEGDPLGMLKV 291
+LV+Y+AG D D LG L +
Sbjct: 226 DLVLYDAGVDPHRDDALGKLAL 247
>gi|428774306|ref|YP_007166094.1| histone deacetylase [Cyanobacterium stanieri PCC 7202]
gi|428688585|gb|AFZ48445.1| Histone deacetylase [Cyanobacterium stanieri PCC 7202]
Length = 303
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 118/260 (45%), Gaps = 18/260 (6%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LP++Y DY + + H F K+ + + L +G +PL AS E L +
Sbjct: 1 MNLPVVYHADY---VTPLPQEHRFPMPKFKLLYELLLKDGITSPTLTHQPLIASAEILQL 57
Query: 93 VHSESYLKS-LQSSPNVSII--IEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
VH Y++ S + + I +P + LV+R V GTIL A+LA +
Sbjct: 58 VHHPHYVEQYCNGSLDTKALRRIGLP----WSEGLVKRTC-----TAVAGTILTAQLALK 108
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKD 209
G N GG HH + G GFC + D+++ Y + +++I+DLD HQG+G
Sbjct: 109 YGLCCNTAGGTHHAFPEYGSGFCIFNDLAIASKYLLEHQLVEKILIVDLDVHQGDGTAYT 168
Query: 210 FSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDP 269
F+ + RV+ M +P ++ D + + G + YL+ L L P
Sbjct: 169 FAHEPRVFTFSMHCEANFPY---RKQTSDLDIPLPIGLDDDGYLQILASHLPHLLQEVRP 225
Query: 270 ELVIYNAGTDILEGDPLGML 289
++V+Y+ G D GD LG L
Sbjct: 226 DIVLYDGGVDTHRGDRLGKL 245
>gi|13474726|ref|NP_106295.1| hypothetical protein mll5679 [Mesorhizobium loti MAFF303099]
gi|14025481|dbj|BAB52081.1| mll5679 [Mesorhizobium loti MAFF303099]
Length = 300
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 121/271 (44%), Gaps = 34/271 (12%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCI--VEPLEASKEDLLV 92
L +++ PDYD F H F SK+ + + L + G + + EP AS L +
Sbjct: 3 LQIVHHPDYDAGF---ATNHRFPMSKYPLLMEALRARGLASPDALNTTEPAPASW--LKL 57
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYP------FRKQV--GGTILAA 144
H+ Y+ + I VP ++R++ +P R Q+ GGTILAA
Sbjct: 58 AHAADYVDQV-------ISCSVPEK-------IEREIGFPVGPRVSLRAQLATGGTILAA 103
Query: 145 KLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
+LA G A N GG HH +G GFC + D+++ + ++++DLD HQG+
Sbjct: 104 RLALRHGIACNTAGGSHHARRAQGAGFCTFNDVAVASLVLLDEGAAQNILVVDLDVHQGD 163
Query: 205 GHEKDFSSDSRVYILDMFNPGIYPRDYEARRFI-DQKVEVVSGTTTNEYLKKLDEALEVA 263
G S + V+ M R+Y R+ D + + GT YL++L L
Sbjct: 164 GTADILSDEPGVFTFSMHG----ERNYPVRKIASDLDIALPDGTGDAAYLRRLATILPEL 219
Query: 264 GHTFDPELVIYNAGTDILEGDPLGMLKVKWG 294
++V YNAG D+ D LG L + G
Sbjct: 220 SARARWDIVFYNAGVDVHAEDRLGRLALSNG 250
>gi|225012063|ref|ZP_03702500.1| histone deacetylase superfamily [Flavobacteria bacterium MS024-2A]
gi|225003618|gb|EEG41591.1| histone deacetylase superfamily [Flavobacteria bacterium MS024-2A]
Length = 305
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 116/257 (45%), Gaps = 16/257 (6%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+P+ + P Y L + + H F K+ + Q L EG +P A+ + +L +H
Sbjct: 7 IPIAFDPIYR---LPLPENHRFPMEKYELLPQQLIYEGTCLATDFFKPTPATLKTVLQIH 63
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
+Y+K L +S++ FP LV+R+ + GGTI+ + A E G
Sbjct: 64 DANYVKRL---CELSLLKSEIRSIGFPLSQKLVEREFVI-----AGGTIMGCEKAFETGI 115
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
A+N+ GG HH +D G FC D ++ Y +++IIDLD HQGNG F +
Sbjct: 116 AMNIAGGTHHAFSDRGEAFCLLNDQAIAAQYLLDTKKAKKILIIDLDVHQGNGTASIFKT 175
Query: 213 DSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELV 272
+ V+ L + YP E D + + GT YL ++ + + P+ V
Sbjct: 176 NPSVFTLSVHGSKNYPFRKEKS---DLDIGLEDGTEDETYLGQIKKVIPALFDKIKPDFV 232
Query: 273 IYNAGTDILEGDPLGML 289
Y G D+L D LG L
Sbjct: 233 FYLCGVDVLSTDKLGRL 249
>gi|398852713|ref|ZP_10609361.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM80]
gi|398243287|gb|EJN28878.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM80]
Length = 306
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 119/261 (45%), Gaps = 20/261 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G ++ P + L + H
Sbjct: 3 LPLIYHEDYSPEF---PADHRFPMDKFRLLRDHLVDSGLTRDADLLRPEICPNDILALAH 59
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
+Y++ S S + +P + L +R V + VGG+ILAA+ A E G
Sbjct: 60 DRAYIERYMSGELSREDQRRLGLP----WNEALARRTV-----RAVGGSILAAEQALEHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A ++ GG HH D GFC + D+++ HY ++RV+I D D HQG+G +
Sbjct: 111 LACHLAGGTHHAHYDYPAGFCIFNDLAIISHYLLQSGRVNRVLIFDCDVHQGDGTARILH 170
Query: 212 SDSRVYILDMFNPGIYP-RDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPE 270
+ + +P R E+ D + + G +YLK +D+ L + P+
Sbjct: 171 DTPEAITVSLHCEKNFPARKAES----DWDIPLPKGMGDGDYLKVVDDTLNYLLPLYQPD 226
Query: 271 LVIYNAGTDILEGDPLGMLKV 291
LV+Y+AG D+ + D LG L++
Sbjct: 227 LVLYDAGVDVHKDDALGYLQL 247
>gi|392538695|ref|ZP_10285832.1| histone deacetylase superfamily protein [Pseudoalteromonas marina
mano4]
Length = 299
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 124/262 (47%), Gaps = 20/262 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+ L Y P Y S L + + H F K+ R+ + GFL +P +AS L + H
Sbjct: 1 MQLYYHPLY--SNLPLPERHRFPIQKYQRLKTEIEHLGFL-PTAFKQPAKASPSQLALCH 57
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
SE Y+ + + S I P A LV+R +L VGG+I AA+ A + G
Sbjct: 58 SEQYINNFLTGNLSDKAIKKIGFPYSAQ----LVERTLL-----SVGGSIQAAEEALKSG 108
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A N+ GG+HH +D G GFC + D+++ + V+I D D HQG+G + +
Sbjct: 109 LACNLSGGYHHAYSDYGSGFCIFNDLAIAATHLLNTHKAKTVLIFDCDVHQGDGTAQIIN 168
Query: 212 SDSRVYIL--DMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDP 269
S I+ + +PR ++ D + + + +EY+ L +L + P
Sbjct: 169 QQSHKNIITCSIHCEQNFPR---LKQQSDYDFSLPAKSGDDEYIDTLQHSLALCVSIHQP 225
Query: 270 ELVIYNAGTDILEGDPLGMLKV 291
++++YNAG DI D LG+L V
Sbjct: 226 DIILYNAGADIYTKDELGLLNV 247
>gi|170744430|ref|YP_001773085.1| histone deacetylase superfamily protein [Methylobacterium sp. 4-46]
gi|168198704|gb|ACA20651.1| histone deacetylase superfamily [Methylobacterium sp. 4-46]
Length = 298
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 115/257 (44%), Gaps = 13/257 (5%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LP+++ P Y+ + + H F K+GR+ + L + G + N V P A + + H
Sbjct: 2 LPIVFHPAYEAE---LPEGHRFPMRKYGRLAEILRARGLV-PNGFVRPEPAGAPTVALAH 57
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAI 154
+Y+ + ++ V +E + L + V R+ L GGT+LA +LA G A
Sbjct: 58 DRAYVDQVLTA-TVPRAVE-KRIGLPVDAGVARRSL----ASAGGTLLAGRLALAGGLAG 111
Query: 155 NVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDS 214
+ GG HH GGGFC D+++ + I R ++IDLD HQG+G + +
Sbjct: 112 STAGGSHHARRAGGGGFCVLNDVAVAALALLREGAIRRALVIDLDVHQGDGTADCLAGEP 171
Query: 215 RVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIY 274
++ M YP D + D V + G Y+ L + P+LV Y
Sbjct: 172 DLFTFSMHGERNYPTD---KVPGDLDVGLPDGLDDAGYMAALVRHVPRLLDALRPDLVFY 228
Query: 275 NAGTDILEGDPLGMLKV 291
NAG D D LG L +
Sbjct: 229 NAGVDPHRDDRLGRLAL 245
>gi|86608428|ref|YP_477190.1| histone deacetylase family protein [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|86556970|gb|ABD01927.1| histone deacetylase family protein [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 305
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 118/264 (44%), Gaps = 22/264 (8%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LP++Y PDY + H F K+ + + L EG + + P +
Sbjct: 1 MSLPIVYHPDYSAP---LPPGHRFPMPKFRLLQELLLREGVIRPQQVHHPELPPLAWIES 57
Query: 93 VHSESYLK-----SLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLA 147
VH+ Y++ SL++ I + P LVQR + VGGT+L A+LA
Sbjct: 58 VHTPEYVRAYCEGSLEAKLQRRIGLPWSPE------LVQRTC-----RAVGGTVLTAQLA 106
Query: 148 KERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHE 207
G A N GG HH G GFC + D+++ Q + R++I+DLD HQG+G
Sbjct: 107 LRHGLACNTAGGTHHAFPAYGSGFCIFNDLAIAAQVLLQQGLVQRLLIVDLDVHQGDGTA 166
Query: 208 KDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTF 267
F S+ RV+ M +P ++ D V + G YL+ L + L
Sbjct: 167 WIFRSEPRVFTFSMHCEANFP---ATKQQSDLDVPLPVGMEDEAYLQTLADHLPDLLAQV 223
Query: 268 DPELVIYNAGTDILEGDPLGMLKV 291
P+LV+Y+AG D E D LG L +
Sbjct: 224 RPDLVLYDAGVDPHEEDLLGKLAL 247
>gi|300864305|ref|ZP_07109183.1| histone deacetylase superfamily protein [Oscillatoria sp. PCC 6506]
gi|300337694|emb|CBN54329.1| histone deacetylase superfamily protein [Oscillatoria sp. PCC 6506]
Length = 305
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 120/264 (45%), Gaps = 22/264 (8%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
+LP++Y DY + H F +K+ + + L ++G ++ P +E + +
Sbjct: 1 MELPIVYHNDY---VAPLPPGHRFPMAKFQLLSEMLLADGVAVRSQFHLPTLPKREWIEL 57
Query: 93 VHSESYLK-----SLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLA 147
VH Y++ +L + I + P C+ VGGTIL A+LA
Sbjct: 58 VHEPDYVQAYYNGTLDAKAQRRIGLPWSPALANRTCIA-----------VGGTILTAQLA 106
Query: 148 KERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHE 207
G A N GG HH G GFC + D+++ + +V+I+DLD HQG+G
Sbjct: 107 ISHGIACNTAGGTHHAFPSYGSGFCIFNDLAIASRLLQKMGLVQKVLIVDLDVHQGDGTA 166
Query: 208 KDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTF 267
F DS V+ M +P ++ D V + G +EYL+ L + L
Sbjct: 167 VIFQDDSSVFTFSMHCEVNFP---GTKQQSDLDVSLPVGMEDDEYLQTLAKYLPDLLSDV 223
Query: 268 DPELVIYNAGTDILEGDPLGMLKV 291
+P+LV+Y+AG D +GD LG L +
Sbjct: 224 NPDLVLYDAGVDPHKGDKLGKLAL 247
>gi|398986788|ref|ZP_10691706.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM24]
gi|399011733|ref|ZP_10714063.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM16]
gi|398117317|gb|EJM07069.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM16]
gi|398151664|gb|EJM40206.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM24]
Length = 306
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 119/261 (45%), Gaps = 20/261 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G ++ P + L + H
Sbjct: 3 LPLIYHEDYSPEF---PADHRFPMDKFRLLRDHLVDSGLTRDADLLRPEICPNDILALAH 59
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
+Y++ S S + +P + L +R V + VGG+ILAA+ A E G
Sbjct: 60 DRAYIERYMSGELSREDQRRLGLP----WNEALARRTV-----RAVGGSILAAEKALEHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A ++ GG HH D GFC + D+++ HY ++RV+I D D HQG+G +
Sbjct: 111 LACHLAGGTHHAHYDYPAGFCIFNDLAIISHYLLQSGRVNRVLIFDCDVHQGDGTARILH 170
Query: 212 SDSRVYILDMFNPGIYP-RDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPE 270
+ + +P R E+ D + + G +YLK +D+ L + P+
Sbjct: 171 DTPEAITVSLHCEKNFPARKAES----DWDIPLPKGMGDGDYLKVVDDTLSYLLPLYQPD 226
Query: 271 LVIYNAGTDILEGDPLGMLKV 291
LV+Y+AG D+ + D LG L++
Sbjct: 227 LVLYDAGVDVHKDDALGYLQL 247
>gi|398938902|ref|ZP_10668169.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM41(2012)]
gi|398164896|gb|EJM53021.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM41(2012)]
Length = 306
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 120/261 (45%), Gaps = 20/261 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G ++ P E L + H
Sbjct: 3 LPLIYHEDYSPEF---PADHRFPMDKFRLLRDHLVDSGLTRDADLLRPDLCPPEILALAH 59
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
+Y++ S + +P + L +R V + VGG++LAA+ A E G
Sbjct: 60 DPAYIERYMGGELSREDQRRLGLP----WSEALARRTV-----RAVGGSLLAAEQALEHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A ++ GG HH D GFC + D+++ H+ ++RV+I D D HQG+G +
Sbjct: 111 LACHLAGGTHHAHYDHPAGFCIFNDLAVISHFLLESGRVNRVLIFDCDVHQGDGTARILH 170
Query: 212 SDSRVYILDMFNPGIYP-RDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPE 270
+ + + +P R E+ D + + G +YLK +D+AL + P+
Sbjct: 171 NTPEAVTVSLHCEKNFPARKAES----DWDIPLPMGMGDADYLKVVDDALNYLLPLYQPD 226
Query: 271 LVIYNAGTDILEGDPLGMLKV 291
LV+Y+AG D+ + D LG LK+
Sbjct: 227 LVLYDAGVDVHKDDALGYLKL 247
>gi|440751264|ref|ZP_20930498.1| Putative histone deacetylase/AcuC/AphA family protein [Mariniradius
saccharolyticus AK6]
gi|436480128|gb|ELP36385.1| Putative histone deacetylase/AcuC/AphA family protein [Mariniradius
saccharolyticus AK6]
Length = 279
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 111/237 (46%), Gaps = 13/237 (5%)
Query: 60 KWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVAL 119
K+ + + L EG + + +P + + H +YL+ L+ N+S+
Sbjct: 3 KYDLLPEQLLYEGTVKEENFFQPAKLDDRWIKNTHCSTYLEKLR---NLSLSKSEIRKTG 59
Query: 120 FP--NCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADI 177
FP LV+R+V + G++ A+ A E G +N+ GG HH A+ G GFC DI
Sbjct: 60 FPLSQQLVEREV-----HIMAGSVQASLYALEHGIGMNIAGGTHHAYAERGEGFCLLNDI 114
Query: 178 SLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFI 237
++ +Y ++V+ +DLD HQGNG K F ++ V+ M YP E
Sbjct: 115 AISANYLLDNALANKVLAVDLDVHQGNGTAKLFEENTSVFTFSMHGAANYPMHKEKS--- 171
Query: 238 DQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKVKWG 294
D + + T YL L E L+ TF P+ +IY G D+LE D +G L + G
Sbjct: 172 DLDIGLPDKTGDQVYLNILSENLKRLIDTFQPDFMIYQCGVDVLETDKIGRLGMSIG 228
>gi|118589342|ref|ZP_01546748.1| hypothetical protein SIAM614_07353 [Stappia aggregata IAM 12614]
gi|118438042|gb|EAV44677.1| hypothetical protein SIAM614_07353 [Labrenzia aggregata IAM 12614]
Length = 309
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 113/268 (42%), Gaps = 30/268 (11%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LP+++ P Y + H F K+ + + + EG L N P A E + +
Sbjct: 1 MTLPIVHHPAYCAD---LPANHRFPMDKFRAVAELIRREGLLSDNAFFRPRPAPFEWVAL 57
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTILAA 144
H +Y+ + ++ VP + R++ +P R+ + GGT+L
Sbjct: 58 AHEPAYVDQVFNA-------RVPDK-------IAREIGFPMREDIALRARCATGGTVLTG 103
Query: 145 KLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
LA E G A N GG HH G GFC + D+++ I I ++IDLD HQG+
Sbjct: 104 YLALEHGIACNTAGGSHHARRAHGAGFCVFNDVAVAIKVLQADGAIRTALVIDLDVHQGD 163
Query: 205 GHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQ-KVEVVSGTTTNEYLKKLDEALEVA 263
G F D V+ + + YP R+ + + GT YL L+E L
Sbjct: 164 GTADIFQGDPNVFTFSLHSEKNYP----VRKVPSHLDIGLADGTGDEVYLAILEEVLPDL 219
Query: 264 GHTFDPELVIYNAGTDILEGDPLGMLKV 291
++V +NAG D GD LG L +
Sbjct: 220 LRQGPWDIVFFNAGVDPYSGDRLGRLAL 247
>gi|320335190|ref|YP_004171901.1| histone deacetylase [Deinococcus maricopensis DSM 21211]
gi|319756479|gb|ADV68236.1| Histone deacetylase [Deinococcus maricopensis DSM 21211]
Length = 299
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 77/158 (48%), Gaps = 3/158 (1%)
Query: 134 RKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRV 193
R+ GGT A A GW IN+ GG HH D GGFC D ++ YA + RV
Sbjct: 89 RRATGGTFAALHDALRVGWGINLAGGTHHAFRDRAGGFCLLNDAAMVARYALDEGLARRV 148
Query: 194 MIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYL 253
+I+DLD HQG+G + L + YP + D + + G T EYL
Sbjct: 149 LILDLDVHQGDGTANLLGGVPHTFTLSVHGERNYPFRKQTS---DLDIGLPDGVTDAEYL 205
Query: 254 KKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ LDE + A F P++V+Y AG D+L GD G ++
Sbjct: 206 RVLDERVRPALEAFRPDVVVYLAGADVLAGDRFGRFQL 243
>gi|86604935|ref|YP_473698.1| histone deacetylase family protein [Synechococcus sp. JA-3-3Ab]
gi|86553477|gb|ABC98435.1| histone deacetylase family protein [Synechococcus sp. JA-3-3Ab]
Length = 305
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 118/264 (44%), Gaps = 22/264 (8%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LP++Y PDY + H F K+ + + L EG + + +P +
Sbjct: 1 MSLPVVYHPDYSAP---LPPGHRFPMPKFRLLHELLLREGVIRPQQVHQPELPPLAWIES 57
Query: 93 VHSESYLK-----SLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLA 147
VH+ Y++ SL++ I + P LVQR + VGGT+L A+LA
Sbjct: 58 VHTPEYVRAYCEGSLEAKLQRRIGLPWSPE------LVQRTC-----RAVGGTVLTAQLA 106
Query: 148 KERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHE 207
G A N GG HH G GFC + D+++ Q + +V+I+DLD HQG+G
Sbjct: 107 LRHGLACNTAGGTHHAFPAYGSGFCIFNDLAIAAQVLLQQGLVQKVLIVDLDVHQGDGTA 166
Query: 208 KDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTF 267
F S+ RV+ M +P +A D V + G YL+ L + L
Sbjct: 167 WIFRSEPRVFTFSMHCAANFPATKQAS---DLDVPLPVGLEDEAYLQTLADYLPDLLAQV 223
Query: 268 DPELVIYNAGTDILEGDPLGMLKV 291
P+LV+Y+AG D D LG L +
Sbjct: 224 RPDLVLYDAGVDPHREDLLGKLAL 247
>gi|291233233|ref|XP_002736558.1| PREDICTED: predicted protein-like, partial [Saccoglossus
kowalevskii]
Length = 315
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 119/248 (47%), Gaps = 28/248 (11%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV--VHSESYLKSLQSSPNVSII 111
H F K+ R+ Q L + + + ++ P++ASK DLL VH++ Y++ +
Sbjct: 35 HRFQMRKFERLYQILLEQNVICERQVLMPVKASK-DLLTEAVHTKDYIEDFFNG------ 87
Query: 112 IEVPPVALFPNCLVQRKVLYPF--------RKQVGGTILAAKLAKERGWAINVGGGFHHC 163
+ + QRK + + R + GGT+L A+ A + G A + GG HH
Sbjct: 88 --------WTDEKAQRKTGFVWSEGLVSRCRYETGGTVLTAEAALQCGLACSTAGGTHHA 139
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
G G+C + DI++ Y ++ +SRV++IDLD HQG+G F D V+ +
Sbjct: 140 FPAYGAGYCLFNDIAVAAKYLILRNKVSRVLVIDLDVHQGDGTAFIFKDDPAVFTFSVHC 199
Query: 224 PGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEG 283
+P ++ D + + GT +Y+ + L TF P+LVIY+AG D +
Sbjct: 200 GKNFPL---FKQQSDLDISLNCGTGNADYMDVIQHNLPWIFQTFRPDLVIYDAGVDPHKE 256
Query: 284 DPLGMLKV 291
D LG L +
Sbjct: 257 DLLGQLAL 264
>gi|33865411|ref|NP_896970.1| histone deacetylase/AcuC/AphA family protein [Synechococcus sp. WH
8102]
gi|33632580|emb|CAE07392.1| Putative histone deacetylase/AcuC/AphA family protein
[Synechococcus sp. WH 8102]
Length = 323
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 114/241 (47%), Gaps = 15/241 (6%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSL---QSSPNVSI 110
H F +K+ + + L E L N I PL + DL +H SY ++ Q S +
Sbjct: 37 HRFPMAKFRLLRRLLLDEQVLQANQIRRPLSIPRRDLERIHRRSYHQAFSRDQLSRSEQR 96
Query: 111 IIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGG 170
I +P A P LVQR L VGGT+L A+LA + G A ++ GG HH G G
Sbjct: 97 RIGLP--ATRP--LVQRTWL-----SVGGTLLTARLALQHGIACHLAGGTHHAHPGFGSG 147
Query: 171 FCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRD 230
FC + D++ + R++++DLD HQG+G F+ + R+ L + +P
Sbjct: 148 FCIFNDVATTARVLLDNGEVQRLLVVDLDVHQGDGTAACFADEPRITTLSVHAASNFPLR 207
Query: 231 YEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLK 290
A D + + T ++YL + + L P+LV++NAG D D LG L+
Sbjct: 208 KVAS---DIDIPLEDATGDDDYLAAIGDRLPQVLDDQQPDLVLFNAGVDPHRDDRLGRLE 264
Query: 291 V 291
+
Sbjct: 265 L 265
>gi|88857897|ref|ZP_01132539.1| histone deacetylase family protein [Pseudoalteromonas tunicata D2]
gi|88819514|gb|EAR29327.1| histone deacetylase family protein [Pseudoalteromonas tunicata D2]
Length = 302
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 107/222 (48%), Gaps = 33/222 (14%)
Query: 82 PLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQ----- 136
P A+ + LL+ HS Y+ + E+ A+ RK+ +P+ K+
Sbjct: 48 PTPATSQQLLLCHSSEYVMQFLTG-------ELDSKAI-------RKMGFPWSKELVERT 93
Query: 137 ---VGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISL----CIHYAFVQLN 189
VG +I AA++A + G+++ + GG+HH D G GFC + D+++ CI V+
Sbjct: 94 CLSVGASINAAQIALKYGFSLQLSGGYHHAFTDFGSGFCIFNDLAIAAAHCIELGLVE-- 151
Query: 190 ISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTT 249
RV+I D D HQG+G + S + + +P + D + G T
Sbjct: 152 --RVLIFDCDVHQGDGTAQISQQQSNIISCSIHCEQNFPAKKQQS---DLDFALNKGCTD 206
Query: 250 NEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+EYL + +AL +A + P+L++YNAG DI D LG L +
Sbjct: 207 DEYLSTVQQALTLATRLYQPDLILYNAGADIFAQDELGYLNI 248
>gi|372210259|ref|ZP_09498061.1| histone deacetylase [Flavobacteriaceae bacterium S85]
Length = 300
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 119/257 (46%), Gaps = 16/257 (6%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
L + Y P Y+ ++K H F K+ I + L EG D +PL+A+ DL+ H
Sbjct: 2 LKIAYHPCYEHP---LKKGHRFPMEKYDLIPKQLMYEGTCDFENFFKPLKANFCDLIEAH 58
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
+E+Y+ L N+ + E + FP +V R+++ GTI + A E G
Sbjct: 59 TEAYVNRLL---NLQLTKEEIRQSGFPLSKQIVDRELII-----TQGTIDCSYYALEYGI 110
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
A+NV GG HH ++ FC D ++ Y +V+I+DLD HQGNG + F +
Sbjct: 111 AMNVAGGTHHAYSNRPDPFCYLNDQAVGATYLLKNRLAKKVLIVDLDVHQGNGTAEIFRN 170
Query: 213 DSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELV 272
V+ M YP + E D + + + T +EYL L + L P+ V
Sbjct: 171 TPEVFTFSMHGKHNYPFEKEIS---DLDIGLENNCTDDEYLSTLKQVLPKLLKEQQPDFV 227
Query: 273 IYNAGTDILEGDPLGML 289
Y +G DIL D LG L
Sbjct: 228 FYQSGVDILASDKLGKL 244
>gi|254421490|ref|ZP_05035208.1| Histone deacetylase family, putative [Synechococcus sp. PCC 7335]
gi|196188979|gb|EDX83943.1| Histone deacetylase family, putative [Synechococcus sp. PCC 7335]
Length = 304
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 117/262 (44%), Gaps = 22/262 (8%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
P++Y P Y + H F K+ + L + + + I +P + L +VH
Sbjct: 4 FPVVYHPAY---VTPLPDGHRFPMPKFRLLRDLLVRDRIITEAQIFQPGAPPVDWLELVH 60
Query: 95 SESYLK-----SLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
+ Y++ S+++ I + P LVQR VGGTIL AKLA +
Sbjct: 61 TADYVQAYCSGSIETKAQRRIGLPWSP------GLVQRTC-----TAVGGTILTAKLALK 109
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKD 209
G A N GG HH D G GFC + D+++ I Q I R +IIDLD HQG+G
Sbjct: 110 HGIACNTAGGTHHAFPDYGSGFCIFNDLAIAIKVLQSQNLIHRALIIDLDVHQGDGSAFI 169
Query: 210 FSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDP 269
F D V+ M +P ++ D V + T YL L L +P
Sbjct: 170 FKDDPSVFTFSMHCKANFP---GRKQQSDLDVALDEDTGDAVYLATLRSHLYPLLAQVNP 226
Query: 270 ELVIYNAGTDILEGDPLGMLKV 291
+LV+Y+AG D+ + D LG L +
Sbjct: 227 DLVLYDAGVDVHKDDRLGKLAL 248
>gi|383453278|ref|YP_005367267.1| histone deacetylase family protein [Corallococcus coralloides DSM
2259]
gi|380727969|gb|AFE03971.1| histone deacetylase family protein [Corallococcus coralloides DSM
2259]
Length = 299
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 108/238 (45%), Gaps = 9/238 (3%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ + + L G L E A + +L VH+ YL + E
Sbjct: 17 HRFPMEKYRLLREILLERGILPLAVFHEAPRAERGELEHVHTPRYLDAFFGGKLTDA--E 74
Query: 114 VPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCA 173
+ + FP L +++ R VGGT+ AA+ A E G+ N+ GG HH D G GFC
Sbjct: 75 LRRLG-FPWSL---RLVDNARASVGGTLAAARAALEDGFGANLAGGTHHAFPDHGEGFCV 130
Query: 174 YADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEA 233
+ DI++ I + I R +++DLD HQGNG F+ D V+ M +P A
Sbjct: 131 FNDIAVAIRVLQAEGAIRRAVVVDLDVHQGNGTAAVFAGDPSVFTFSMHGEHNFPFRKHA 190
Query: 234 RRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+D +E G EYL LD L + +L+ + AG D LE D LG L +
Sbjct: 191 SH-LDLGLE--DGVGDAEYLAVLDAHLPHVLESAHADLLFFQAGVDPLEEDTLGRLSL 245
>gi|669044|emb|CAA78368.1| Portion of hypothetical protein [Synechococcus sp. PCC 7002]
Length = 300
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 115/260 (44%), Gaps = 18/260 (6%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
P++Y PDY I + H F K+ + L +G + + +P + L +VH
Sbjct: 3 FPVVYHPDYVTP---IPEEHRFPMPKFRLLHGLLLEDGVIQPEQVYQPQLPDRAWLELVH 59
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
Y+ + +P I +P + +VQR + VGGTIL A+LA E G
Sbjct: 60 EPDYVTAYCQGTLTPKAQRRIGLP----WSAGVVQRTL-----TAVGGTILTAQLALEHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A N GG HH G GFC D+++ + R++I+DLD HQG+G F
Sbjct: 111 LACNTAGGTHHAFPGYGSGFCILNDLAIATRTIQQRGLAQRILIVDLDVHQGDGTAFIFQ 170
Query: 212 SDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPEL 271
D V+ M +P ++ D + + G + YL+ L LE P+L
Sbjct: 171 DDPTVFTFSMHCEVNFP---SQKQRSDLDLGLPEGLDDDGYLQILAHHLEDLLSQVKPDL 227
Query: 272 VIYNAGTDILEGDPLGMLKV 291
V Y+AG D GD LG L +
Sbjct: 228 VFYDAGVDTHVGDRLGKLAM 247
>gi|119774382|ref|YP_927122.1| histone deacetylase/AcuC/AphA family protein [Shewanella
amazonensis SB2B]
gi|119766882|gb|ABL99452.1| histone deacetylase/AcuC/AphA family protein [Shewanella
amazonensis SB2B]
Length = 305
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 120/260 (46%), Gaps = 17/260 (6%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+PL+Y Y S L + H F +K+ + Q L G + V P + VH
Sbjct: 2 IPLVYHTSY--SKLVLPPKHQFPITKYAHLRQHLLEYGHALEAQFVSPDPVDATFIKGVH 59
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
Y+ + + SP + P + LV+R + +GG++L AKLA RG
Sbjct: 60 DSDYVDAFLNGTLSPQAIRRLGFP----LSHALVERTL-----HSLGGSLLTAKLAMSRG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A+++ GG+HH D G G+C + D+ L + + + SRVMI+D D HQG+G +
Sbjct: 111 IALHLAGGYHHAHRDFGSGYCVFNDLVLAARHLIDEGHASRVMILDCDVHQGDGTATLCA 170
Query: 212 SDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPEL 271
+ + + +P A D V + G ++YL L++ + H P++
Sbjct: 171 DMDDIISVSVHCDSNFPSRKPAS---DYDVPLPKGLEDDDYLDALEQVFQYLLHLEKPDV 227
Query: 272 VIYNAGTDILEGDPLGMLKV 291
++Y+AG D+ D LG L +
Sbjct: 228 ILYDAGVDVHHDDRLGHLNI 247
>gi|319785544|ref|YP_004145020.1| histone deacetylase [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317171432|gb|ADV14970.1| Histone deacetylase [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 301
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 116/267 (43%), Gaps = 30/267 (11%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
L +++ PDYD F H F SK+ + + L + G + A L + H
Sbjct: 3 LQIVHHPDYDAGF---AVNHRFPMSKYPLLMEALRTRGLAGPEALSTAEPAPASWLELAH 59
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTILAAKL 146
+ Y+ + I VP ++R++ +P +V GGT+LAA+L
Sbjct: 60 AADYVDQV-------INCRVPEK-------IEREIGFPIGPRVSLRAQLATGGTVLAARL 105
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
A G A N GG HH +G GFC + D+++ + ++I+DLD HQG+G
Sbjct: 106 ALRHGIACNTAGGSHHARRAQGAGFCTFNDVAVAALVLLAEGAARNILIVDLDVHQGDGT 165
Query: 207 EKDFSSDSRVYILDMFNPGIYPRDYEARRFI-DQKVEVVSGTTTNEYLKKLDEALEVAGH 265
+ D RV+ M R+Y R+ D V + GT YL++L L
Sbjct: 166 ADILADDPRVFTFSMHG----DRNYPVRKIASDLDVALPDGTGDAAYLERLAAILPELSA 221
Query: 266 TFDPELVIYNAGTDILEGDPLGMLKVK 292
++V YNAG D+ D LG L +
Sbjct: 222 QAHWDIVFYNAGVDVHADDRLGRLSLS 248
>gi|258621190|ref|ZP_05716224.1| histone deacetylase/AcuC/AphA family protein [Vibrio mimicus VM573]
gi|424807274|ref|ZP_18232682.1| histone deacetylase/AcuC/AphA family protein [Vibrio mimicus SX-4]
gi|258586578|gb|EEW11293.1| histone deacetylase/AcuC/AphA family protein [Vibrio mimicus VM573]
gi|342325216|gb|EGU20996.1| histone deacetylase/AcuC/AphA family protein [Vibrio mimicus SX-4]
Length = 306
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 120/266 (45%), Gaps = 24/266 (9%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKW---GRICQFLSSEGFLDKNCIVEPLEASKEDLL 91
+PLIY P Y L + +P + + + Q SE + + P A+ ++
Sbjct: 2 IPLIYHPIYSQLDLPVGHRYPINKYRLLYEEIVRQQEHSEEWRTAFNFIAPQMAALSLVM 61
Query: 92 VVHSESYLKSLQSSPNVSIIIEVPPVAL----FP--NCLVQRKVLYPFRKQVGGTILAAK 145
VH Y+++L +P + FP L++R +L VGGT L +
Sbjct: 62 SVHDSDYVRALLEGT-------LPAAKMRRIGFPWSEKLIERTLL-----SVGGTCLTVE 109
Query: 146 LAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A G AI++ GG+HH AD G GFC + D+++ H+A + +V+IID D H G+G
Sbjct: 110 QALLSGVAIHLSGGYHHAHADFGSGFCLFNDLAIAAHFALSLSGVDKVLIIDSDVHHGDG 169
Query: 206 HEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGH 265
+ + L +P A D +E T E+L + +E+A +
Sbjct: 170 TATLCAERDEIITLSFHCDKNFPARKPAS---DMDIEFTKQTGNEEFLSTFTQVVEMAVN 226
Query: 266 TFDPELVIYNAGTDILEGDPLGMLKV 291
P+L++Y+AG DI D LG L +
Sbjct: 227 LHQPDLILYDAGVDIHSDDELGYLSI 252
>gi|399069021|ref|ZP_10749252.1| deacetylase, histone deacetylase/acetoin utilization protein
[Caulobacter sp. AP07]
gi|398045378|gb|EJL38108.1| deacetylase, histone deacetylase/acetoin utilization protein
[Caulobacter sp. AP07]
Length = 309
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 112/239 (46%), Gaps = 11/239 (4%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ R+ L +EG + + P + LL+VH +Y++ + +S+ +
Sbjct: 26 HRFPMDKFSRLAAVLEAEGVAGPDGFIRPEPIDLDSLLLVHDAAYVRGVV---ELSLPAD 82
Query: 114 VPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCA 173
V PN V R GGT+ AA+LA E G A N GG HH AD G GFC
Sbjct: 83 VVRRIGMPNT---ESVAARARAATGGTLAAARLALEHGIACNTAGGSHHAQADTGAGFCV 139
Query: 174 YADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEA 233
+ D+++ + + +V+++DLD HQG+G + F D V+ M +P A
Sbjct: 140 FNDVAVAARRLQAEGAVRQVLVVDLDVHQGDGTARIFEGDPSVFTFSMHAEKNFP----A 195
Query: 234 RRFI-DQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
R+ + D +++ G YLK L L P+LV +NAG D D LG L +
Sbjct: 196 RKAVSDLDIDLPDGMGDEAYLKALSGVLPELLARVAPDLVFFNAGVDPHADDRLGRLSL 254
>gi|443311907|ref|ZP_21041529.1| deacetylase, histone deacetylase/acetoin utilization protein
[Synechocystis sp. PCC 7509]
gi|442777982|gb|ELR88253.1| deacetylase, histone deacetylase/acetoin utilization protein
[Synechocystis sp. PCC 7509]
Length = 305
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 125/261 (47%), Gaps = 20/261 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY + + H F K+ ++ + L + G P ++ L +VH
Sbjct: 3 LPLIYHCDY---VAALPEQHRFPMPKFRQLYELLIATGVAHPQQFFLPEIPCQQWLELVH 59
Query: 95 SESYLKS-LQSSPNVSII--IEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
+ Y+++ LQ + + I +P + LV+R VGGTIL A+LA + G
Sbjct: 60 TSEYVQAYLQGTLDAKAQRRIGLP----WSPALVKRTC-----TAVGGTILTAQLALKYG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISR-VMIIDLDAHQGNGHEKDF 210
A N GG HH G G+C + D+++ +LN++R ++IIDLD HQG+G F
Sbjct: 111 LACNTAGGTHHAFPSYGSGYCIFNDLAIASR-VIQRLNLARKILIIDLDVHQGDGTAFIF 169
Query: 211 SSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPE 270
+D V+ M +P ++ D + + G +YL+ L L + P+
Sbjct: 170 QNDDSVFTFSMHCEVNFP---GTKQVSDLDIPLPVGMEDEDYLQTLANYLPDVLNQVKPD 226
Query: 271 LVIYNAGTDILEGDPLGMLKV 291
LV+Y+AG D GD LG L +
Sbjct: 227 LVLYDAGVDTHVGDRLGKLAL 247
>gi|170078236|ref|YP_001734874.1| histone deacetylase/AcuC/AphA family protein [Synechococcus sp. PCC
7002]
gi|190358879|sp|P28606.2|Y1628_SYNP2 RecName: Full=Uncharacterized protein SYNPCC7002_A1628
gi|169885905|gb|ACA99618.1| histone deacetylase/AcuC/AphA family protein [Synechococcus sp. PCC
7002]
Length = 300
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 115/260 (44%), Gaps = 18/260 (6%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
P++Y PDY I + H F K+ + L +G + + +P + L +VH
Sbjct: 3 FPVVYHPDYVTP---IPEEHRFPMPKFRLLHGLLLEDGVIQPEQVYQPQLPDRAWLELVH 59
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
Y+ + +P I +P + +VQR + VGGTIL A+LA E G
Sbjct: 60 EPDYVTAYCQGTLTPKAQRRIGLP----WSAGVVQRTL-----TAVGGTILTAQLALEHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A N GG HH G GFC D+++ + R++I+DLD HQG+G F
Sbjct: 111 LACNTAGGTHHAFPGYGSGFCILNDLAIATRTIQQRGLAQRILIVDLDVHQGDGTAFIFQ 170
Query: 212 SDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPEL 271
D V+ M +P ++ D + + G + YL+ L LE P+L
Sbjct: 171 DDPTVFTFSMHCEVNFP---SQKQRSDLDLGLPEGLDDDGYLQILAHHLEDLLSQVKPDL 227
Query: 272 VIYNAGTDILEGDPLGMLKV 291
V Y+AG D GD LG L +
Sbjct: 228 VFYDAGVDTHVGDRLGKLAM 247
>gi|332532183|ref|ZP_08408064.1| histone deacetylase family protein [Pseudoalteromonas haloplanktis
ANT/505]
gi|332038281|gb|EGI74726.1| histone deacetylase family protein [Pseudoalteromonas haloplanktis
ANT/505]
Length = 297
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 110/213 (51%), Gaps = 13/213 (6%)
Query: 81 EPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFP--NCLVQRKVLYPFRKQVG 138
EP +A+K L + H+++Y+ + N ++ + FP N LV+R +L VG
Sbjct: 44 EPKKATKSQLSLCHNQTYINNF---LNGTLSNKAIKKMGFPYSNELVERTLL-----SVG 95
Query: 139 GTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDL 198
+I +++ A + G++ N+ GG+HH +D G GFC + D+++ + V+I D
Sbjct: 96 ASIQSSEHALKHGFSANLSGGYHHAYSDYGSGFCIFNDLAIAAAHLINTEQADTVLIFDC 155
Query: 199 DAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDE 258
D HQG+G + + ++ + +PR+ + + + + TT EYL L++
Sbjct: 156 DVHQGDGTAQITQNHDQIITCSIHCEQNFPRNKQESTY---DFALPAKTTDAEYLATLEQ 212
Query: 259 ALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
AL+ +P++++YNAG DI D LG+ V
Sbjct: 213 ALDFCVRIHNPDIILYNAGADIYTKDELGLFDV 245
>gi|393762659|ref|ZP_10351285.1| histone deacetylase [Alishewanella agri BL06]
gi|392606281|gb|EIW89166.1| histone deacetylase [Alishewanella agri BL06]
Length = 312
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 130/264 (49%), Gaps = 29/264 (10%)
Query: 36 PLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHS 95
PLIY P Y S L + H + K+ + Q L + G + ++ ++P + L +H
Sbjct: 7 PLIYHPCY--SELALPANHRYPIGKYRSLYQQLLALG-VPESGFLQPAPVTAAALSTLHD 63
Query: 96 ESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTILAAKLA 147
+Y+++L S + R++ +P+ +Q+ GGT+L A+ A
Sbjct: 64 PAYVEALCQGTLDSKAM--------------RRIGFPWSEQLIKRSLTSLGGTLLCAEQA 109
Query: 148 KERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHE 207
+ G A+++ GG+HH EG GFC + D++ + Q + V+I DLD HQG+G
Sbjct: 110 LQHGLALHLSGGYHHAFYAEGSGFCLFNDLAFAA-LSMQQQGVGPVLIFDLDVHQGDGTA 168
Query: 208 KDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTF 267
F+++S + + +P ++ D + + T YL+ + ++L+ +
Sbjct: 169 ALFTANSGIITASIHCEKNFP---ARKQRSDWDIGLDKDCTDASYLEAVSQSLDNLLRWY 225
Query: 268 DPELVIYNAGTDILEGDPLGMLKV 291
PELVIY+AG DI + D LG+L++
Sbjct: 226 QPELVIYDAGVDIHQQDDLGLLQI 249
>gi|346643249|ref|YP_262471.2| histone deacetylase [Pseudomonas protegens Pf-5]
gi|341580402|gb|AAY94613.2| histone deacetylase family protein [Pseudomonas protegens Pf-5]
Length = 306
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 118/261 (45%), Gaps = 20/261 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G ++ P E L + H
Sbjct: 3 LPLIYHDDYSPEF---PAEHRFPMDKFRLLRDHLVDSGLTRDADLLRPELCPAEILALAH 59
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
+Y++ S S + +P + L +R V + VGG++LAA+ A E G
Sbjct: 60 DPAYIERYMSGELSREDQRRLGLP----WSEALARRTV-----RAVGGSLLAAEQALEHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A ++ GG HH D GFC + D+++ HY + RV+I D D HQG+G +
Sbjct: 111 LACHLAGGTHHAHYDYPAGFCIFNDLAVISHYLLESGRVGRVLIFDCDVHQGDGTARILQ 170
Query: 212 SDSRVYILDMFNPGIYPRDYEARRF-IDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPE 270
+ + + +P AR+ D + + G +YL +D+ L + P+
Sbjct: 171 HTADAVTVSLHCEKNFP----ARKAQSDWDIPLPMGMGDADYLNVVDDTLNYLLPLYQPD 226
Query: 271 LVIYNAGTDILEGDPLGMLKV 291
LV+Y+AG D+ + D LG LK+
Sbjct: 227 LVLYDAGVDVHQDDALGYLKL 247
>gi|388466851|ref|ZP_10141061.1| histone deacetylase family protein [Pseudomonas synxantha BG33R]
gi|388010431|gb|EIK71618.1| histone deacetylase family protein [Pseudomonas synxantha BG33R]
Length = 306
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 118/261 (45%), Gaps = 20/261 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G + ++ P + L + H
Sbjct: 3 LPLIYHEDYSPEF---PADHRFPMDKFRLLRDHLVDSGLTQDSQLLRPQLCPADILALAH 59
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
Y++ S + +P + L +R V + VGG+ILAA+ A E G
Sbjct: 60 EPGYIERYMGGELSREDQRRLGLP----WSEALARRTV-----RAVGGSILAAEQALEHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A ++ GG HH D GFC + D+++ Y ++RV+I D D HQG+G +
Sbjct: 111 LACHLAGGTHHAHYDYPAGFCIFNDLAVISRYLLASGRVNRVLIFDCDVHQGDGTARILH 170
Query: 212 SDSRVYILDMFNPGIYPRDYEARRF-IDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPE 270
+ + +P AR+ D + + G +YLK +D+AL + P+
Sbjct: 171 DTPEAITVSLHCEKNFP----ARKAQSDWDIPLPMGMGDADYLKVVDDALNYLLPLYQPD 226
Query: 271 LVIYNAGTDILEGDPLGMLKV 291
LV+Y+AG D+ + D LG LK+
Sbjct: 227 LVLYDAGVDVHKDDALGYLKL 247
>gi|384083397|ref|ZP_09994572.1| histone deacetylase superfamily protein [gamma proteobacterium
HIMB30]
Length = 308
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 121/260 (46%), Gaps = 18/260 (6%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
+LP+++ Y F H F +K+ + +++ + + +V P+ + L+
Sbjct: 3 RLPIVWDAGYSPVF---PDSHRFPMAKFRLLKEWV--DHHVPTTELVTPIPCPTDVLMET 57
Query: 94 HSESYLKSLQS-SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
H Y+ QS S N I E+ + L R L +GGT+ +LAK G
Sbjct: 58 HDPDYVSGFQSGSLNAKAIREIG--LPWSEGLRDRTNL-----ALGGTMRTCELAKTYGL 110
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
A ++ GG HH D G GFC Y D+++ Y Q SRV+I D D HQG+G +
Sbjct: 111 ASHLAGGTHHAHYDRGSGFCIYNDLAVSARYLVNQGLASRVLIFDCDVHQGDGTASILAH 170
Query: 213 DSRVYILDMFNPGIYP-RDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPEL 271
DS+ + + +P R E+ D V G T + YL + E LE ++ P+
Sbjct: 171 DSQTFTCSIHAEKNFPVRKVES----DLDVNCPDGMTDDAYLSLVFETLESVITSWHPDF 226
Query: 272 VIYNAGTDILEGDPLGMLKV 291
VIY+AG+D+ D LG L +
Sbjct: 227 VIYDAGSDVHIDDALGRLSI 246
>gi|395445593|ref|YP_006385846.1| histone deacetylase superfamily protein [Pseudomonas putida ND6]
gi|388559590|gb|AFK68731.1| histone deacetylase superfamily protein [Pseudomonas putida ND6]
Length = 317
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 117/265 (44%), Gaps = 20/265 (7%)
Query: 31 PIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDL 90
P LPLIY DY F H F K+ + L G ++ P + L
Sbjct: 12 PSMPLPLIYHEDYSPEF---PAEHRFPMDKFRLLHDHLVGSGLTTDQALLRPDICPNDIL 68
Query: 91 LVVHSESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLA 147
+ H SY+ + S + +P + L +R V + VGG++L A++A
Sbjct: 69 ALAHDRSYIARYMNGELSREDQRRLGLP----WSEALARRTV-----RAVGGSLLTAEMA 119
Query: 148 KERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHE 207
+ G A ++ GG HH D GFC + D+++ Y + RV+I D D HQG+G
Sbjct: 120 LQHGIACHLAGGTHHAHYDHPAGFCIFNDLAVISRYLLEAGRVHRVLIFDCDVHQGDGTA 179
Query: 208 KDFSSDSRVYILDMFNPGIYPRDYEARRF-IDQKVEVVSGTTTNEYLKKLDEALEVAGHT 266
+ + + +P AR+ D + + G YLK +D+AL
Sbjct: 180 RILHDTPEAITVSLHCEQNFP----ARKAQSDWDIPLPRGMGDTAYLKVVDDALNYLLPL 235
Query: 267 FDPELVIYNAGTDILEGDPLGMLKV 291
+ P+LV+Y+AG D+ + D LG L++
Sbjct: 236 YQPDLVLYDAGVDVHKDDALGYLQL 260
>gi|1075598|pir||B47050 glnA 3'-region hypothetical protein - Synechococcus sp
gi|580726|emb|CAA78367.1| Portion of hypothetical protein [Synechococcus sp. PCC 7002]
Length = 310
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 115/260 (44%), Gaps = 18/260 (6%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
P++Y PDY I + H F K+ + L +G + + +P + L +VH
Sbjct: 13 FPVVYHPDYVTP---IPEEHRFPMPKFRLLHGLLLEDGVIQPEQVYQPQLPDRAWLELVH 69
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
Y+ + +P I +P + +VQR + VGGTIL A+LA E G
Sbjct: 70 EPDYVTAYCQGTLTPKAQRRIGLP----WSAGVVQRTL-----TAVGGTILTAQLALEHG 120
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A N GG HH G GFC D+++ + R++I+DLD HQG+G F
Sbjct: 121 LACNTAGGTHHAFPGYGSGFCILNDLAIATRTIQQRGLAQRILIVDLDVHQGDGTAFIFQ 180
Query: 212 SDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPEL 271
D V+ M +P ++ D + + G + YL+ L LE P+L
Sbjct: 181 DDPTVFTFSMHCEVNFP---SQKQRSDLDLGLPEGLDDDGYLQILAHHLEDLLSQVKPDL 237
Query: 272 VIYNAGTDILEGDPLGMLKV 291
V Y+AG D GD LG L +
Sbjct: 238 VFYDAGVDTHVGDRLGKLAM 257
>gi|409422584|ref|ZP_11259675.1| histone deacetylase superfamily protein [Pseudomonas sp. HYS]
Length = 304
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 121/261 (46%), Gaps = 20/261 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY +F H F K+ + L + G ++ P + L + H
Sbjct: 3 LPLIYHDDYSPAF---PAEHRFPMDKFRLLRDHLVASGLTTDAALLRPEICPDDILALAH 59
Query: 95 SESYLKSL---QSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
+Y++ + S + +P + L +R V + VGG++LAA+ A E G
Sbjct: 60 DRAYIERYMHGELSREDQRRLGLP----WSEALARRTV-----RAVGGSLLAAEQALEHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A ++ GG HH D GFC + D+++ HY + +V+I D D HQG+G +
Sbjct: 111 IACHLAGGTHHAHYDHPAGFCIFNDLAVISHYLLEAGRVHKVLIFDCDVHQGDGTARILH 170
Query: 212 SDSRVYILDMFNPGIYP-RDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPE 270
+ + + +P R E+ D + + G YLK +D+AL + P+
Sbjct: 171 NTPDAITVSLHCEQNFPARKAES----DWDIPLPRGMGDQAYLKVVDDALNYLLPLYRPD 226
Query: 271 LVIYNAGTDILEGDPLGMLKV 291
LV+Y+AG D+ + D LG L++
Sbjct: 227 LVLYDAGVDVHKDDALGYLQL 247
>gi|226943137|ref|YP_002798210.1| histone deacetylase superfamily protein [Azotobacter vinelandii DJ]
gi|226718064|gb|ACO77235.1| histone deacetylase superfamily [Azotobacter vinelandii DJ]
Length = 316
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 116/259 (44%), Gaps = 12/259 (4%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LPL+Y +Y SF H F K+ + L G + P + L +
Sbjct: 11 MSLPLVYHDEYSPSF---PDGHRFPMEKFRLLRDHLVDSGLTSDAELRRPEPCPTDILAL 67
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
H +Y++ S + + P L +R VL VGG++LAA+LA E G
Sbjct: 68 AHDPAYIERYCSGALSREELRRLGLPWTP-ALARRTVL-----AVGGSLLAAELALEHGL 121
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
A ++ GG HH D GFC + D+++ Y + RV+I D D HQG+G +
Sbjct: 122 ACHLAGGTHHAHHDHPSGFCIFNDLAVVSRYLLASGRVGRVLIFDCDVHQGDGTARILED 181
Query: 213 DSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELV 272
+ + +P +AR D + + G +YLK +D+AL + P+LV
Sbjct: 182 TPEAITVSLHCEQNFPA-RKARS--DWDIGLPRGMGDADYLKVVDDALNYLLPLYQPDLV 238
Query: 273 IYNAGTDILEGDPLGMLKV 291
+Y+AG D+ + D LG L +
Sbjct: 239 LYDAGVDVHQDDALGYLAL 257
>gi|407070923|ref|ZP_11101761.1| histone deacetylase/AcuC/AphA family protein [Vibrio cyclitrophicus
ZF14]
Length = 306
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 128/271 (47%), Gaps = 34/271 (12%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKW----GRICQFLSSEGFLDKNC-IVEPLEASKED 89
+PLIY P Y S L + + H + +K+ G + + S+ + +P+ S E
Sbjct: 2 IPLIYHPIY--SQLPLPEGHRYPINKYQLLHGAVEALMDSDPLWKSQFEVFQPMPVSVEQ 59
Query: 90 LLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTI 141
+ VH Y+ L S +P + R++ +P+ +Q+ GGT
Sbjct: 60 VKQVHDSEYVDLLISG-------NLPAAKM-------RRIGFPWSEQLIERTLYSSGGTC 105
Query: 142 LAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAH 201
LAA++A E G+AI++ GG+HH D G GFC D+ L +A +I +V+I+D D H
Sbjct: 106 LAAEMAIESGFAIHLSGGYHHAHHDFGSGFCLLNDLVLAAKHALTFEHIDKVLIVDSDVH 165
Query: 202 QGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARR-FIDQKVEVVSGTTTNEYLKKLDEAL 260
G+G + + L +P AR+ D V + T E+L+ ++
Sbjct: 166 HGDGTATLCQENDDIITLSFHCDKNFP----ARKPLSDLDVPLSRETGDEEFLRCFEQVT 221
Query: 261 EVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
++A P+L++Y+AG DI + D LG L V
Sbjct: 222 KLAIAHHQPDLIVYDAGIDIHQDDELGYLNV 252
>gi|46200256|ref|YP_005923.1| deacetylase [Thermus thermophilus HB27]
gi|46197884|gb|AAS82296.1| deacetylase [Thermus thermophilus HB27]
Length = 294
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 81/242 (33%), Positives = 119/242 (49%), Gaps = 22/242 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQS---SPNVSI 110
HPF K+G + + L +G L ++ E +E L + H SYL+ L + S+
Sbjct: 17 HPFPLYKYGGVAEAL--KGLL---PVLPAPEVPREALFLAHEASYLEKLFGEGLTREESL 71
Query: 111 IIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGG 170
+ +P F L++R + GGT+ AA A + G +N+ GG HH G
Sbjct: 72 RLGLP----FSQALLRRAL-----HAAGGTLAAALDALKTGLGLNLSGGTHHAFPGRAEG 122
Query: 171 FCAYADISLCIHYAFVQLNIS-RVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPR 229
+ + D+++ I + + S RV+++DLDAHQGNG F D V+ L + YP
Sbjct: 123 YSLFNDVAVAIFWLRAKEGFSGRVLVVDLDAHQGNGTAFFFREDPSVFTLSLHGERNYPL 182
Query: 230 DYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGML 289
E D V + GT YL L+EALE A F P+LV YNAG D+L+GD G L
Sbjct: 183 KKERS---DLDVGLPDGTGDEAYLWALEEALEKA-RAFRPDLVFYNAGVDVLKGDRFGRL 238
Query: 290 KV 291
+
Sbjct: 239 AL 240
>gi|392542891|ref|ZP_10290028.1| histone deacetylase/AcuC/AphA family protein [Pseudoalteromonas
piscicida JCM 20779]
Length = 301
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 124/263 (47%), Gaps = 19/263 (7%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLL-VVHS 95
L Y P Y S L + + H F SK+ ++ Q +++ F I EP + D L + H
Sbjct: 2 LYYHPIY--SELNLPEKHRFPISKYKKLYQRINASKF--AKFIKEPEQKITADALQLCHD 57
Query: 96 ESYLKSLQSSPNVSIIIEVPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKERGWA 153
+Y+ + N ++ + FP LVQR ++ +GG + AA+ A E G+
Sbjct: 58 SNYVDAFL---NGTLSEKAIKKMGFPWSEQLVQRTLI-----SLGGGLTAAQSALEYGFG 109
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSD 213
N+ GG+HH D G GFC + D ++ + RV+I D D HQG+G +
Sbjct: 110 ANLSGGYHHAHRDFGSGFCIFNDWAVVAATLIAHQRVERVLIFDCDVHQGDGTATIVADR 169
Query: 214 SRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVI 273
+ + +PR + D + T +Y+ + EAL++A + P++++
Sbjct: 170 DDIITCSIHCESNFPR---VKPQSDLDFALPVNTQDAQYVATVREALQLAVRLYQPDIIL 226
Query: 274 YNAGTDILEGDPLGMLKV-KWGV 295
YNAG D+ +GD LG V K GV
Sbjct: 227 YNAGADVYQGDELGHFSVSKQGV 249
>gi|423200322|ref|ZP_17186902.1| hypothetical protein HMPREF1167_00485 [Aeromonas veronii AER39]
gi|404619730|gb|EKB16634.1| hypothetical protein HMPREF1167_00485 [Aeromonas veronii AER39]
Length = 298
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 122/259 (47%), Gaps = 15/259 (5%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
L + Y P Y S L + + H F +K+ + + L +G+ + E A++E +
Sbjct: 1 MSLRIFYHPLY--SSLTLPERHRFPLAKYQGLFERLQVQGY----PLGEAPSATREQICR 54
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
+H Y+ + S + I P L++R + + VG T+ A++ A E+G
Sbjct: 55 IHDADYVAAALSGQLEARAIRKIGFPWSP-MLMERTL-----RSVGATVAASRHALEQGC 108
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
+ + GG+HH D G GFC + D+ + + +V+IIDLD HQG+G +
Sbjct: 109 GLQISGGYHHAHRDHGSGFCLFNDLVIAAQACLDEGRCEQVLIIDLDVHQGDGSAALCAG 168
Query: 213 DSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELV 272
+ L + +P ++A +D + SG + YL L +AL +A + P+L+
Sbjct: 169 RRDIITLSLHGEHNFPH-HKAASHLD--FPLPSGMADDAYLTTLQQALSLALRLYSPDLI 225
Query: 273 IYNAGTDILEGDPLGMLKV 291
+Y AG D+ D LG L +
Sbjct: 226 LYQAGVDVHHADELGYLSL 244
>gi|320451507|ref|YP_004203603.1| deacetylase [Thermus scotoductus SA-01]
gi|320151676|gb|ADW23054.1| deacetylase [Thermus scotoductus SA-01]
Length = 293
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 80/239 (33%), Positives = 116/239 (48%), Gaps = 21/239 (8%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQS---SPNVSI 110
HPF K+ + + L D I+ E +E L + H Y++ L + S S+
Sbjct: 17 HPFPLYKYQGVAEALK-----DLLPILPAPEVPREALHLAHRPEYVEKLFTEGLSRQESL 71
Query: 111 IIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGG 170
+ +P F L++R + GGT+ AA+ A E G +N+ GG HH D G
Sbjct: 72 RLGLP----FSPSLLRRALF-----AAGGTLAAARDALELGLGLNLSGGTHHAYPDRAEG 122
Query: 171 FCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRD 230
+ + D+++ + + + RV+++DLDAHQGNG F D V+ L + YP
Sbjct: 123 YSLFNDVAVAVAWLRREGFRGRVLVVDLDAHQGNGTAVFFQEDPTVFTLSLHGERNYPLR 182
Query: 231 YEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGML 289
E D V + G YL LDEALE+A F PELV YNAG D+L+GD G L
Sbjct: 183 KERS---DLDVGLPDGVGDEAYLYALDEALEIA-QAFRPELVFYNAGVDVLKGDRFGRL 237
>gi|24373380|ref|NP_717423.1| histone deacetylase superfamily protein [Shewanella oneidensis
MR-1]
gi|24347646|gb|AAN54867.1| histone deacetylase superfamily protein [Shewanella oneidensis
MR-1]
Length = 304
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 122/260 (46%), Gaps = 17/260 (6%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+PL+Y Y S L + H F ++K+ + Q+L P + E+++ VH
Sbjct: 2 IPLVYHASY--SKLALPIHHRFPTTKYAHLYQYLLDNQLATPTQFHTPTPMTAEEIMQVH 59
Query: 95 SESYLKS-LQSSPNVSIIIEVPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
Y++ + + S + + FP LV+R + + GT L A LA + G
Sbjct: 60 HRDYVEQFIDGTLATSALRRIG----FPWSEALVERTL-----HSLAGTSLTAALALQTG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A+++ GG+HH + G G+C + D+ + ++ + +++I D D HQG+G
Sbjct: 111 IALHLTGGYHHAHYEFGSGYCIFNDLIIAARKLIIEQQLHKILIFDCDVHQGDGTATLSQ 170
Query: 212 SDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPEL 271
+ + +P + + +E+V GT + YL +++ LE+ P+L
Sbjct: 171 LHQGIISCSIHCKDNFPSRKQHSHY---DIELVKGTDDSAYLDTVEQTLELLIRLHQPDL 227
Query: 272 VIYNAGTDILEGDPLGMLKV 291
++Y+AG DI + D LG L++
Sbjct: 228 ILYDAGVDIHQDDDLGHLQI 247
>gi|148549841|ref|YP_001269943.1| histone deacetylase superfamily protein [Pseudomonas putida F1]
gi|148513899|gb|ABQ80759.1| histone deacetylase superfamily [Pseudomonas putida F1]
Length = 317
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 118/265 (44%), Gaps = 20/265 (7%)
Query: 31 PIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDL 90
P LPLIY DY F H F K+ + L G ++ P + L
Sbjct: 12 PSMPLPLIYHEDYSPEF---PAEHRFPMDKFRLLHDHLVGSGLTTDQALLRPDICPNDIL 68
Query: 91 LVVHSESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLA 147
+ H SY++ + S + +P + L +R V + VGG++L A++A
Sbjct: 69 ALAHDRSYIERYMNGELSREDQRRLGLP----WSEALARRTV-----RAVGGSLLTAEMA 119
Query: 148 KERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHE 207
+ G A ++ GG HH D GFC + D+++ Y + RV+I D D HQG+G
Sbjct: 120 LQHGIACHLAGGTHHAHYDHPAGFCIFNDLAVISRYLLEAGRVHRVLIFDCDVHQGDGTA 179
Query: 208 KDFSSDSRVYILDMFNPGIYPRDYEARRF-IDQKVEVVSGTTTNEYLKKLDEALEVAGHT 266
+ + + +P AR+ D + + G YL+ +D+AL
Sbjct: 180 RILHDTPEAITVSLHCEQNFP----ARKAQSDWDIPLPRGMGDTAYLRVVDDALNYLLPL 235
Query: 267 FDPELVIYNAGTDILEGDPLGMLKV 291
+ P+LV+Y+AG D+ + D LG L++
Sbjct: 236 YQPDLVLYDAGVDVHKDDALGYLQL 260
>gi|428309234|ref|YP_007120211.1| deacetylase [Microcoleus sp. PCC 7113]
gi|428250846|gb|AFZ16805.1| deacetylase, histone deacetylase/acetoin utilization protein
[Microcoleus sp. PCC 7113]
Length = 305
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 122/260 (46%), Gaps = 18/260 (6%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LP+IY PDY + + H F K+G++ + L + + P E + +VH
Sbjct: 3 LPIIYHPDY---VAPLPEGHRFPMPKFGKLYERLLNSHIATLDQFHTPEIPPTEWIELVH 59
Query: 95 SESYLKS-LQSSPNVSII--IEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
+ Y+++ L+ + + I +P + + LV+R VGGT+L A+LA + G
Sbjct: 60 TSDYVQAYLKGTLDTKAQRRIGLP----WSSALVKRTC-----TAVGGTLLTAQLALKYG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A N GG HH G GFC + D+++ Q +++I+DLD HQG+G F
Sbjct: 111 LACNTAGGTHHAFPSYGSGFCIFNDLAIAARVLQQQGLAQKILILDLDVHQGDGTAFIFQ 170
Query: 212 SDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPEL 271
D V+ M +P ++ D V + G + YL+ L L F P++
Sbjct: 171 DDPTVFTFSMHCEINFP---STKQTSDLDVPLPEGMEDDAYLQTLARYLPDLLSEFQPDI 227
Query: 272 VIYNAGTDILEGDPLGMLKV 291
V+Y+AG D GD LG L +
Sbjct: 228 VLYDAGVDPHTGDRLGKLAL 247
>gi|456861311|gb|EMF79988.1| histone deacetylase family protein [Leptospira weilii serovar Topaz
str. LT2116]
Length = 203
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 83/155 (53%), Gaps = 4/155 (2%)
Query: 137 VGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMII 196
+GGTILA +L + + ++GGGFHH D GFC D ++ + +++ I
Sbjct: 1 MGGTILATELTGKYKFVYHIGGGFHHSMPDRAEGFCYLNDAAIAVKLYQKAYPGRKILFI 60
Query: 197 DLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKL 256
DLD HQGNG+ F DS V+ M +YP+ + + +D +E GT +YL+ L
Sbjct: 61 DLDLHQGNGNSVIFQEDSDVFTFSMHQENLYPK--KEKSGLDIPLE--EGTDDGKYLELL 116
Query: 257 DEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
E+L F P+L+ Y AG D EGD LG LK+
Sbjct: 117 LESLRKIESDFKPDLIFYIAGADPFEGDSLGDLKL 151
>gi|384430533|ref|YP_005639893.1| histone deacetylase [Thermus thermophilus SG0.5JP17-16]
gi|333966001|gb|AEG32766.1| Histone deacetylase [Thermus thermophilus SG0.5JP17-16]
Length = 294
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 81/242 (33%), Positives = 118/242 (48%), Gaps = 22/242 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQS---SPNVSI 110
HPF K+G + + L +G L ++ E +E L + H SYL+ L + S+
Sbjct: 17 HPFPLYKYGGVAEAL--KGLL---PVLPAPEVPREALFLAHEASYLEKLFGEGLTREESL 71
Query: 111 IIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGG 170
+ +P F L++R + GGT+ AA A + G +N+ GG HH G
Sbjct: 72 RLGLP----FSQALLRRAL-----HAAGGTLAAALDALKTGLGLNLSGGTHHAFPGRAEG 122
Query: 171 FCAYADISLCIHYAFVQLNIS-RVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPR 229
+ + D+++ I + + S RV+++DLDAHQGNG F D V+ L + YP
Sbjct: 123 YSLFNDVAVAIFWLRAKEGFSGRVLVVDLDAHQGNGTAFFFREDPSVFTLSLHGERNYPL 182
Query: 230 DYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGML 289
E D V + GT YL L+EALE A F P+LV YNAG D+L GD G L
Sbjct: 183 RKEKS---DLDVGLPDGTGDEAYLWALEEALEKA-RAFRPDLVFYNAGVDVLRGDRFGRL 238
Query: 290 KV 291
+
Sbjct: 239 AL 240
>gi|330811883|ref|YP_004356345.1| histone deacetylase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|423699453|ref|ZP_17673943.1| histone deacetylase family protein [Pseudomonas fluorescens
Q8r1-96]
gi|327379991|gb|AEA71341.1| Putative histone deacetylase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|387996896|gb|EIK58226.1| histone deacetylase family protein [Pseudomonas fluorescens
Q8r1-96]
Length = 306
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 117/263 (44%), Gaps = 20/263 (7%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LPLIY DY F H F K+ + L G ++ P + L +
Sbjct: 1 MSLPLIYHEDYSPDF---PAEHRFPMDKFRLLRDHLVDSGLTRDADLLRPSLCPPDILAL 57
Query: 93 VHSESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
H +Y++ S + +P + L +R V + VGG++LAA+ A E
Sbjct: 58 AHDRAYIERYMGGELSREDQRRLGLP----WSEALARRTV-----RAVGGSLLAAEQALE 108
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKD 209
G A ++ GG HH D GFC + D+++ Y +SRV+I D D HQG+G +
Sbjct: 109 HGLACHLAGGTHHAHYDHPAGFCIFNDLAVISRYFLASGRVSRVLIFDCDVHQGDGTARI 168
Query: 210 FSSDSRVYILDMFNPGIYPRDYEARRF-IDQKVEVVSGTTTNEYLKKLDEALEVAGHTFD 268
+ + +P AR+ D + + G YLK +D+AL +
Sbjct: 169 LHDTPDAVTVSLHCEKNFP----ARKAQSDWDIPLPMGMEDAAYLKVVDDALNYLLPLYQ 224
Query: 269 PELVIYNAGTDILEGDPLGMLKV 291
P+LV+Y+AG D+ + D LG LK+
Sbjct: 225 PDLVLYDAGVDVHKDDALGYLKL 247
>gi|23006878|ref|ZP_00048995.1| COG0123: Deacetylases, including yeast histone deacetylase and
acetoin utilization protein [Magnetospirillum
magnetotacticum MS-1]
Length = 275
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 120/262 (45%), Gaps = 29/262 (11%)
Query: 38 IYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSES 97
++ P Y+ + + H F K+GR+ + L + G L + V P A L H +
Sbjct: 1 MFHPAYEAA---LPAGHRFPMGKYGRLAEILRARG-LAPDGFVTPEPAGAALLSGAHEAA 56
Query: 98 YLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTILAAKLAKE 149
Y++++ + +VP V+R + P + V GGT+ AA+LA E
Sbjct: 57 YVEAV-------LAFQVPRA-------VERAIGLPVTEAVAARSRASAGGTLCAARLALE 102
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKD 209
G A + GG HH G GFC + D+++ + I+R ++IDLD HQG+G
Sbjct: 103 HGLAGSTAGGSHHARRAGGAGFCVFNDVAVAALALRREGRIARALVIDLDVHQGDGTADC 162
Query: 210 FSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDP 269
+ + ++ L + YP D + D + + G +YL L+ L FDP
Sbjct: 163 LAREPDLFTLSIHCERNYPYD---KVPGDLDIGLPDGLGDADYLAVLEAHLPALVQGFDP 219
Query: 270 ELVIYNAGTDILEGDPLGMLKV 291
+L+ YNAG D D LG L++
Sbjct: 220 DLIFYNAGVDSHRDDRLGRLRL 241
>gi|84393623|ref|ZP_00992375.1| histone deacetylase/AcuC/AphA family protein [Vibrio splendidus
12B01]
gi|84375764|gb|EAP92659.1| histone deacetylase/AcuC/AphA family protein [Vibrio splendidus
12B01]
Length = 326
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 128/275 (46%), Gaps = 42/275 (15%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSS--EGFLDKNCI-------VEPLEA 85
+PLIY P Y S L + + H + +K+ Q L S E +D++ + +P
Sbjct: 2 IPLIYHPIY--SQLPLPEGHRYPINKY----QLLHSAVEALMDRDPLWKSQFEMFQPTPV 55
Query: 86 SKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV-------- 137
S E + VH Y+ L S +P + R++ +P+ +Q+
Sbjct: 56 SVEQVKQVHDSEYVDLLVSG-------NLPAAKM-------RRIGFPWSEQLIERTLYSS 101
Query: 138 GGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIID 197
GGT LAA++A E G I++ GG+HH D G GFC D+ L +A +I +V+I+D
Sbjct: 102 GGTCLAAEMAIESGLTIHLSGGYHHAHHDFGSGFCLLNDLVLAAKHALTFEHIDKVLIVD 161
Query: 198 LDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARR-FIDQKVEVVSGTTTNEYLKKL 256
D H G+G + + L +P AR+ D V + T E+L+
Sbjct: 162 SDVHHGDGTATLCQENDDIITLSFHCDKNFP----ARKPLSDLDVPLSRETEDEEFLRCF 217
Query: 257 DEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
++ ++A P+L+IY+AG DI + D LG L V
Sbjct: 218 EQVTKLAIAHHQPDLIIYDAGIDIHQDDELGYLNV 252
>gi|392535978|ref|ZP_10283115.1| histone deacetylase [Pseudoalteromonas arctica A 37-1-2]
Length = 276
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 112/243 (46%), Gaps = 26/243 (10%)
Query: 59 SKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVA 118
SK+ + Q ++ G + N +VEP+ + E L ++H E+Y+ L ++ + A
Sbjct: 2 SKFAHLYQHVAKLGLIGDN-LVEPILGTPEPLELIHCENYIHDLWNN-------RLDEKA 53
Query: 119 LFPNCLVQRKVLYPFRKQV--------GGTILAAKLAKERGWAINVGGGFHHCSADEGGG 170
+ R++ P+ K++ GT+ A+LA + G A ++ GG HH D G G
Sbjct: 54 M-------RRIGLPWSKELMARTFTAPQGTLQTARLALKHGIACHLAGGTHHAHTDFGSG 106
Query: 171 FCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRD 230
+C D++ ++ V+I DLD HQG+G + Y + +P
Sbjct: 107 YCMVNDLAFTTQTLIESGEVTNVLIFDLDVHQGDGTAAMLQHQAYAYTCSIHCEKNFPFR 166
Query: 231 YEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLK 290
A D + + +EYL +D+ L +P LV+Y+AG DI +GD LG L
Sbjct: 167 KSAS---DLDIGLADNMKDDEYLAVVDDTLSYLLKELNPSLVLYDAGVDIWQGDGLGKLD 223
Query: 291 VKW 293
+ W
Sbjct: 224 ISW 226
>gi|406676510|ref|ZP_11083696.1| hypothetical protein HMPREF1170_01904 [Aeromonas veronii AMC35]
gi|404626733|gb|EKB23543.1| hypothetical protein HMPREF1170_01904 [Aeromonas veronii AMC35]
Length = 298
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 121/259 (46%), Gaps = 15/259 (5%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
L + Y P Y S L + + H F +K+ + + L +G+ + E A+ E +
Sbjct: 1 MSLRIFYHPLY--SSLTLPERHRFPLAKYQGLFERLQVQGY----PLGEAPAATCEQICR 54
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
+H Y+ + S I P L++R + + VG TI A++ A E+G
Sbjct: 55 IHDADYVAAALSGQLEERAIRKIGFPWSPM-LMERTL-----RSVGATIAASRHALEQGC 108
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
+ + GG+HH D G GFC + D+ + + +V+IIDLD HQG+G +
Sbjct: 109 GLQISGGYHHAHRDHGSGFCLFNDLVIAAQACLDEGRCEQVLIIDLDVHQGDGSAALCAE 168
Query: 213 DSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELV 272
+ L + +P ++A +D + SG T + YL L +AL +A + P+L+
Sbjct: 169 RRDIITLSLHGEHNFPH-HKAASHLD--FPLPSGMTDDAYLTTLQQALSLALRLYSPDLI 225
Query: 273 IYNAGTDILEGDPLGMLKV 291
+Y AG D+ D LG L +
Sbjct: 226 LYQAGVDVHHADELGYLSL 244
>gi|443476226|ref|ZP_21066143.1| Histone deacetylase [Pseudanabaena biceps PCC 7429]
gi|443018851|gb|ELS33037.1| Histone deacetylase [Pseudanabaena biceps PCC 7429]
Length = 305
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 116/260 (44%), Gaps = 18/260 (6%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LP+IY P+Y I + F K+ + + L ++G P E + +VH
Sbjct: 3 LPIIYHPNY---VAPIANTNRFPMEKFRLLYEMLLTDGVAQPEQFFRPELPDLEAIALVH 59
Query: 95 SESYLKSLQSS---PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
Y+ + + P I +P ++ Y R VGGT+L A+ A +G
Sbjct: 60 DREYVDAYWNGNLEPKAQRRIGLP---------WSPELAYRTRIAVGGTLLTARFALRQG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A N GG HH G GFC + D+++ + + +++I+DLD HQG+G F
Sbjct: 111 LACNTAGGTHHAFPSYGSGFCIFNDLAIASRVLLKEGLVKKILIVDLDVHQGDGTAFIFQ 170
Query: 212 SDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPEL 271
++ +V+ M +P ++ D+ + + G + YL+ L L P+L
Sbjct: 171 NEPQVFTFSMHCQINFP---SIKQISDRDIPLPEGMEDDAYLRMLANHLPDLLTEIRPDL 227
Query: 272 VIYNAGTDILEGDPLGMLKV 291
V+Y+AG D GD LG L +
Sbjct: 228 VLYDAGVDPHIGDRLGKLAL 247
>gi|398964631|ref|ZP_10680408.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM30]
gi|398148017|gb|EJM36705.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM30]
Length = 306
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 119/261 (45%), Gaps = 20/261 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G ++ P + L + H
Sbjct: 3 LPLIYHEDYSPEF---PADHRFPMDKFRLLRDHLVDSGLTRDADLLRPEICPNDILALAH 59
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
Y++ S S + +P + L +R V + VGG+ILAA+ A E G
Sbjct: 60 DRRYIERYMSGELSREDQRRLGLP----WNEALARRTV-----RAVGGSILAAEKALEHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A ++ GG HH D GFC + D+++ HY ++RV+I D D HQG+G +
Sbjct: 111 LACHLAGGTHHAHYDYPAGFCIFNDLAIISHYLLQSGRVNRVLIFDCDVHQGDGTARILH 170
Query: 212 SDSRVYILDMFNPGIYP-RDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPE 270
+ + +P R E+ D + + +G +YL+ +D+ L + P+
Sbjct: 171 DTPEAITVSLHCEKNFPARKAES----DWDIPLPNGMGDADYLQVVDDTLNYLLPLYQPD 226
Query: 271 LVIYNAGTDILEGDPLGMLKV 291
LV+Y+AG D+ + D LG L++
Sbjct: 227 LVLYDAGVDVHKDDALGYLQL 247
>gi|348525428|ref|XP_003450224.1| PREDICTED: uncharacterized protein SYNPCC7002_A1628-like
[Oreochromis niloticus]
Length = 345
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 118/258 (45%), Gaps = 13/258 (5%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LP+++ Y + H F K+ R+ Q L + + + + P ASK+ L VH
Sbjct: 42 LPVVHHSKY---VCDLAPSHRFPMGKFPRVLQCLLRDQVITEKQVWVPEIASKDLLSCVH 98
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAI 154
+E YL + N I + FP ++ R + GGT+LAA++A +RG A
Sbjct: 99 TEDYLDNF---INGKISEQEQRRTGFP---WSEGIVRRCRYETGGTVLAAEVALQRGLAC 152
Query: 155 NVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISR-VMIIDLDAHQGNGHEKDFSSD 213
+ GG HH G GFC D+++ Y R V+I+DLD HQG+G F +
Sbjct: 153 STAGGTHHAFPSYGSGFCLLNDLAVAAKYMMDNSPTKRKVLIVDLDVHQGDGTAFIFKEE 212
Query: 214 SRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVI 273
V+ + +P + D + V G +YL ++ L TF P+LV+
Sbjct: 213 PSVFTFSVHCGKNFPLRKQQS---DLDISVEDGLEDKDYLSTVEAHLPWLLETFRPDLVL 269
Query: 274 YNAGTDILEGDPLGMLKV 291
Y+AG D D LG L++
Sbjct: 270 YDAGVDPHWEDELGRLRL 287
>gi|148980163|ref|ZP_01815914.1| deacetylase [Vibrionales bacterium SWAT-3]
gi|145961381|gb|EDK26688.1| deacetylase [Vibrionales bacterium SWAT-3]
Length = 306
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 126/275 (45%), Gaps = 42/275 (15%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSS--EGFLD-----KNC--IVEPLEA 85
+PLIY P Y S L + + H + +K+ Q L S E +D KN + EP
Sbjct: 2 IPLIYHPIY--SQLPLPEGHRYPINKY----QLLHSAVEALMDSDPLWKNMFEVFEPKPV 55
Query: 86 SKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV-------- 137
S E + VH Y+ L S +P + R++ +P+ +Q+
Sbjct: 56 SVEQVKQVHDSDYVDLLVSG-------SLPAAKM-------RRIGFPWSEQLIERTLYSS 101
Query: 138 GGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIID 197
GGT LAA +A E G AI++ GG+HH D G GFC D+ L +A + +V+I+D
Sbjct: 102 GGTCLAADMAIESGLAIHLSGGYHHAHHDFGSGFCLLNDLVLAAKHALTFEQVDKVLIVD 161
Query: 198 LDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARR-FIDQKVEVVSGTTTNEYLKKL 256
D H G+G + L +P AR+ D V + T E+L+
Sbjct: 162 SDVHHGDGTATLCQESDEIITLSFHCDKNFP----ARKPLSDLDVPLSRETEDEEFLRCF 217
Query: 257 DEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
++ ++A P+L+IY+AG DI + D LG L V
Sbjct: 218 EQVTKLAIAHHQPDLIIYDAGVDIHQDDELGYLNV 252
>gi|117921075|ref|YP_870267.1| histone deacetylase superfamily protein [Shewanella sp. ANA-3]
gi|117613407|gb|ABK48861.1| histone deacetylase superfamily [Shewanella sp. ANA-3]
Length = 300
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 121/260 (46%), Gaps = 17/260 (6%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+PL++ Y S L + H F ++K+ R+ Q+L P + ED++ VH
Sbjct: 2 IPLVHHASY--SKLALPSHHRFPTTKYARLYQYLLDNQLAVPAQFHTPSPMTAEDVMQVH 59
Query: 95 SESYLKS-LQSSPNVSIIIEVPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
+ Y++ +Q + + + FP LV+R + V GT L A LA + G
Sbjct: 60 QQDYVEQFIQGRLACAALRRIG----FPWSEALVERTL-----HSVSGTSLTASLALQAG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A+++ GG+HH D G G+C + D+ + + + +V+I D D HQG+G
Sbjct: 111 IALHLTGGYHHAHYDFGSGYCIFNDLIIAARKLMAEQQLHKVLIFDCDVHQGDGTATLSH 170
Query: 212 SDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPEL 271
+ + +P + + +E+ G+ + Y + +++ LE+ P+L
Sbjct: 171 RHQGIISCSIHGKENFPSRKQQSHY---DIELTKGSDDSAYQETVEQTLELLIRLHQPDL 227
Query: 272 VIYNAGTDILEGDPLGMLKV 291
++Y+AG DI + D LG L +
Sbjct: 228 ILYDAGVDIHQDDDLGHLMI 247
>gi|218438511|ref|YP_002376840.1| histone deacetylase superfamily protein [Cyanothece sp. PCC 7424]
gi|218171239|gb|ACK69972.1| histone deacetylase superfamily [Cyanothece sp. PCC 7424]
Length = 304
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 117/262 (44%), Gaps = 18/262 (6%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LP++Y DY + H F K+ + L ++G P ++E + +
Sbjct: 1 MSLPIVYHRDYVTP---LPDGHRFPMPKFKLLYDLLITDGITTPESTHTPEVPTQEIIQL 57
Query: 93 VHSESYLKSLQSS---PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
VH+ Y+ + S P I +P + LV R +GGTIL AKLA +
Sbjct: 58 VHTPDYVGAYCSGTLDPKAQRRIGLP----WSPGLVTRTC-----TALGGTILTAKLALK 108
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKD 209
+G A N GG HH G GFC + D+++ + +V+I+DLD HQG+G
Sbjct: 109 QGIACNTAGGTHHAFPSYGSGFCIFNDLAIATRTLQHLGLVKKVLIVDLDVHQGDGTAYI 168
Query: 210 FSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDP 269
F +D V+ M +P ++ D V + G YLK L + L F+P
Sbjct: 169 FQNDESVFTFSMHCEANFP---GTKQKSDLDVPLPVGLEDEGYLKILSQYLSDLLCQFNP 225
Query: 270 ELVIYNAGTDILEGDPLGMLKV 291
+LV+Y+AG D D LG L +
Sbjct: 226 DLVLYDAGVDTHISDRLGKLAM 247
>gi|83816178|ref|YP_446172.1| histone deacetylase/AcuC/AphA family protein [Salinibacter ruber
DSM 13855]
gi|294508098|ref|YP_003572156.1| histone deacetylase [Salinibacter ruber M8]
gi|83757572|gb|ABC45685.1| histone deacetylase/AcuC/AphA family protein [Salinibacter ruber
DSM 13855]
gi|294344426|emb|CBH25204.1| histone deacetylase [Salinibacter ruber M8]
Length = 307
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 106/251 (42%), Gaps = 15/251 (5%)
Query: 44 DISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQ 103
D ++ + + HPF +K+ + Q L E + +V P +A DL VH+ YL L
Sbjct: 7 DGYYVPLPEGHPFPMAKFPALHQRLLDEDLIRPTDVVAPRQADWTDLRRVHTADYLTHLA 66
Query: 104 S---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGF 160
S + + +P +++Y R V GTI AA +A G A N+ GG
Sbjct: 67 EGSLSDHAERRMGLP---------WSERLVYRSRLAVQGTINAALMALTDGVAANLAGGT 117
Query: 161 HHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILD 220
HH G GFC D+++ I RV+I+DLD HQGN + F+ D+ V+
Sbjct: 118 HHAFPGHGEGFCVLNDVAVAIRVLQAACWAQRVLIVDLDVHQGNANAAVFADDASVFTFS 177
Query: 221 MFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDI 280
M YP + V + T YL L L P+LV Y G D+
Sbjct: 178 MHGAKNYPFEKPPSSL---DVPLDDATGDQSYLDTLRSYLPQTLDAVQPDLVFYLGGIDV 234
Query: 281 LEGDPLGMLKV 291
D G L +
Sbjct: 235 ATDDRFGRLSL 245
>gi|424925046|ref|ZP_18348407.1| Deacetylase [Pseudomonas fluorescens R124]
gi|404306206|gb|EJZ60168.1| Deacetylase [Pseudomonas fluorescens R124]
Length = 306
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 118/261 (45%), Gaps = 20/261 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G ++ P + L + H
Sbjct: 3 LPLIYHEDYSPEF---PADHRFPMDKFRLLRDHLVDSGLTRDADLLRPEICPNDILALAH 59
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
Y++ S S + +P + L +R V + VGG+ILAA+ A E G
Sbjct: 60 DRRYIERYMSGELSREDQRRLGLP----WNEALARRTV-----RAVGGSILAAEKALEHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A ++ GG HH D GFC + D+++ HY ++RV+I D D HQG+G +
Sbjct: 111 LACHLAGGTHHAHYDYPAGFCIFNDLAIISHYLLQSGRVNRVLIFDCDVHQGDGTARILQ 170
Query: 212 SDSRVYILDMFNPGIYP-RDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPE 270
+ + +P R E+ D + + G +YL+ +D+ L + P+
Sbjct: 171 DTPEAITVSLHCEKNFPARKAES----DWDIPLPKGMGDADYLQVVDDTLNYLLPLYQPD 226
Query: 271 LVIYNAGTDILEGDPLGMLKV 291
LV+Y+AG D+ + D LG L++
Sbjct: 227 LVLYDAGVDVHKDDALGYLQL 247
>gi|365096461|ref|ZP_09331053.1| histone deacetylase [Acidovorax sp. NO-1]
gi|363413841|gb|EHL21030.1| histone deacetylase [Acidovorax sp. NO-1]
Length = 314
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 102/225 (45%), Gaps = 35/225 (15%)
Query: 85 ASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPF--------RKQ 136
A+ +L +VH+ Y+ ++ + P QR++ +P+ R
Sbjct: 46 ATDRELALVHTSHYIDAIADG-----TLAAP---------AQREIGFPWSEAMVERARHS 91
Query: 137 VGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNIS----- 191
VG T+ A+K+A G A N+ GG HH A +G GFC + D+++ Q
Sbjct: 92 VGATVAASKVALLEGVAGNLAGGTHHAYAHKGSGFCVFNDVAVATRLLQAQWAQGAAGGR 151
Query: 192 -----RVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSG 246
+V +IDLD HQGNG F D V+ + + +P E D VE+ G
Sbjct: 152 GSRPLQVAVIDLDVHQGNGTAHIFQGDHSVFTVSLHGARNFPFRKEPS---DLDVELPDG 208
Query: 247 TTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
T ++YL+ L+ AL+ F P V Y AG D EGD LG L V
Sbjct: 209 CTDDDYLQALELALQTLEQRFAPRFVFYLAGADPHEGDRLGRLAV 253
>gi|218708941|ref|YP_002416562.1| histone deacetylase/AcuC/AphA family protein [Vibrio splendidus
LGP32]
gi|218321960|emb|CAV17960.1| histone deacetylase/AcuC/AphA family protein [Vibrio splendidus
LGP32]
Length = 306
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 127/274 (46%), Gaps = 42/274 (15%)
Query: 36 PLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSS--EGFLDKNC-------IVEPLEAS 86
PLIY P Y S L + + H + +K+ Q L S E +D + + +P+ S
Sbjct: 3 PLIYHPIY--SQLPLPEGHRYPINKY----QLLHSAVEALMDSDPKWGNAFEMFQPMPVS 56
Query: 87 KEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------G 138
E + VH Y+ L S +P + R++ +P+ +Q+ G
Sbjct: 57 VEQVKQVHDGEYVDLLVSG-------NLPAAKM-------RRIGFPWSEQLIERTLYSSG 102
Query: 139 GTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDL 198
GT LAA++A E G AI++ GG+HH D G GFC D+ L +A +I +V+I+D
Sbjct: 103 GTCLAAEMAIESGLAIHLSGGYHHAHRDFGSGFCLLNDLVLAAKHALTFEHIDKVLIVDS 162
Query: 199 DAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARR-FIDQKVEVVSGTTTNEYLKKLD 257
D H G+G + L +P AR+ D V + T E+L+ +
Sbjct: 163 DVHHGDGTATLCQESDEIITLSFHCDKNFP----ARKPLSDLDVPLSRETEDEEFLRCFE 218
Query: 258 EALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ ++A P+L+IY+AG DI + D LG L V
Sbjct: 219 QVTKLAIAHHQPDLIIYDAGIDIHQDDELGYLNV 252
>gi|17546325|ref|NP_519727.1| hypothetical protein RSc1606 [Ralstonia solanacearum GMI1000]
gi|17428622|emb|CAD15308.1| conserved hypothetical protein [Ralstonia solanacearum GMI1000]
Length = 323
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 103/225 (45%), Gaps = 33/225 (14%)
Query: 81 EPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPF------- 133
E A + LL+ H+ Y+ ++ + + P QR++ +P+
Sbjct: 44 EAPRAGDDALLLAHAPDYVSAVGAG-------RLDPAR-------QREIGFPWSPEMVER 89
Query: 134 -RKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISR 192
R+ G T+ A + A G A+N+ GG HH AD+GGGFC + D ++ + +Q R
Sbjct: 90 SRRSAGATMAACEAAMADGIAVNLAGGTHHAYADKGGGFCVFNDAAIASRW--MQRRPGR 147
Query: 193 ------VMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSG 246
V I+DLD HQGNG D+ V+ L YP EA D V + G
Sbjct: 148 TPEHFPVAIVDLDVHQGNGTASILRDDASVFTLSEHGEKNYPFRKEAS---DLDVGLPDG 204
Query: 247 TTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
YL+ L AL+ F P L+IY AG D EGD LG L++
Sbjct: 205 CGDAAYLEALAGALDTLAARFAPRLIIYLAGADPHEGDRLGRLRL 249
>gi|423097458|ref|ZP_17085254.1| histone deacetylase family protein [Pseudomonas fluorescens Q2-87]
gi|397887914|gb|EJL04397.1| histone deacetylase family protein [Pseudomonas fluorescens Q2-87]
Length = 306
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 117/261 (44%), Gaps = 20/261 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G ++ P + L + H
Sbjct: 3 LPLIYHEDYSPEF---PAEHRFPMDKFRLLRDHLVDSGLTRDVDLLRPSLCPPDILALAH 59
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
+Y++ S + +P + L +R V + VGG++LAA+ A E G
Sbjct: 60 DRAYIERYMGGELSREDQRRLGLP----WSEALARRTV-----RAVGGSLLAAEQALEHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A ++ GG HH D GFC + D+++ Y +SRV+I D D HQG+G +
Sbjct: 111 LACHLAGGTHHAHYDHPAGFCIFNDLAVISRYFLASGRVSRVLIFDCDVHQGDGTARILH 170
Query: 212 SDSRVYILDMFNPGIYPRDYEARRF-IDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPE 270
+ + +P AR+ D + + G YLK +D+AL + P+
Sbjct: 171 DTPDAVTVSLHCEKNFP----ARKAQSDWDIPLPMGMDDGAYLKVVDDALNYLLPLYQPD 226
Query: 271 LVIYNAGTDILEGDPLGMLKV 291
LV+Y+AG D+ + D LG LK+
Sbjct: 227 LVLYDAGVDVHKDDALGYLKL 247
>gi|167035768|ref|YP_001670999.1| histone deacetylase superfamily protein [Pseudomonas putida GB-1]
gi|166862256|gb|ABZ00664.1| histone deacetylase superfamily [Pseudomonas putida GB-1]
Length = 304
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 117/261 (44%), Gaps = 20/261 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G ++ P + L + H
Sbjct: 3 LPLIYHEDYSPEF---PAEHRFPMDKFRLLRDHLVDSGLTTDQALLRPDICPNDILALAH 59
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
SY++ + S + +P + L +R V + VGG++L A++A + G
Sbjct: 60 DRSYIERYMNGELSREDQRRLGLP----WSEALARRTV-----RAVGGSLLTAEMALQHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A ++ GG HH D GFC + D+++ Y + RV+I D D HQG+G +
Sbjct: 111 IACHLAGGTHHAHYDHPAGFCIFNDLAVISRYLLAAGRVHRVLIFDCDVHQGDGTARILH 170
Query: 212 SDSRVYILDMFNPGIYPRDYEARRF-IDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPE 270
+ + +P AR+ D + + G YLK +D+AL + P+
Sbjct: 171 DTPEAITVSLHCEQNFP----ARKAQSDWDIPLPRGMGDTAYLKVVDDALNYLLPLYQPD 226
Query: 271 LVIYNAGTDILEGDPLGMLKV 291
LV+Y+AG D+ + D LG L++
Sbjct: 227 LVLYDAGVDVHKDDALGYLQL 247
>gi|254428920|ref|ZP_05042627.1| Histone deacetylase family, putative [Alcanivorax sp. DG881]
gi|196195089|gb|EDX90048.1| Histone deacetylase family, putative [Alcanivorax sp. DG881]
Length = 302
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 116/258 (44%), Gaps = 14/258 (5%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPL+Y P+Y F G H F K+ R+ L S G + P A L H
Sbjct: 2 LPLVYHPEYSFPFPGK---HRFPMEKFARLHGHLRSRGIAHGDNEFRPGRAKATLLSQAH 58
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAI 154
Y+ ++ + + + + L++R + P GT++ A+LA ++G A
Sbjct: 59 CPQYVSAMVDGTLDARALRRMGLP-WSEALMKRSCIAPM-----GTLMTAQLALQQGVAC 112
Query: 155 NVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDS 214
++ GG HH + G GFC + D + + + + + ++ D D HQG+G + +
Sbjct: 113 HLAGGTHHAHYNFGSGFCIFNDQAFAVRQLLDRGVVKKALMFDCDVHQGDGTAAMLADEP 172
Query: 215 RVYILDMFNPGIYP-RDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVI 273
R + + +P R ++ D V + G T +YL + E L+ P+LV
Sbjct: 173 RAFTCSIHCEKNFPVRKMKS----DLDVGLPLGMTDQDYLDTVFETLDRLLDLVQPDLVF 228
Query: 274 YNAGTDILEGDPLGMLKV 291
Y+AG DI + DPLG L +
Sbjct: 229 YDAGVDIFQHDPLGRLHI 246
>gi|307941483|ref|ZP_07656838.1| histone deacetylase superfamily protein [Roseibium sp. TrichSKD4]
gi|307775091|gb|EFO34297.1| histone deacetylase superfamily protein [Roseibium sp. TrichSKD4]
Length = 354
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 112/261 (42%), Gaps = 16/261 (6%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
+P+++ P Y S + H F K+ + + +EG L + +P A + + +
Sbjct: 39 MSVPIVHHPAYCAS---LPANHRFPMDKFRAVAALIEAEGLLGEGRFYKPRAAPFDWVAL 95
Query: 93 VHSESYLKSLQSSPNVSIIIEVP-PVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
H Y+ + S+ VP VA ++ + R GGT+L LA E G
Sbjct: 96 AHDPVYVDQVFST-------NVPKAVAREIGFDIRPDIAARARYATGGTVLTGYLALEHG 148
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A N GG HH +G GFC + D+++ I ISR ++IDLD HQG+G F
Sbjct: 149 IACNTAGGSHHARWKQGAGFCVFNDVAVAIRVMQADGVISRALVIDLDVHQGDGTADIFR 208
Query: 212 SDSRVYILDMFNPGIYPRDYEARRF-IDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPE 270
V M YP R+ + +E+ G + N YL L P+
Sbjct: 209 HCDSVVTFSMHARKNYP----VRKVPSNHDIELPDGASDNSYLAHLAARTTEVLKRARPD 264
Query: 271 LVIYNAGTDILEGDPLGMLKV 291
+V YNAG D + D LG L +
Sbjct: 265 IVFYNAGVDPYKEDRLGRLAL 285
>gi|338530056|ref|YP_004663390.1| histone deacetylase family protein [Myxococcus fulvus HW-1]
gi|337256152|gb|AEI62312.1| histone deacetylase family protein [Myxococcus fulvus HW-1]
Length = 299
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 108/253 (42%), Gaps = 39/253 (15%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ + + L + G L + E + +EDL VH+ YL
Sbjct: 17 HRFPMEKYRLLREALLARGVLPPESLTESTPSPREDLARVHTPRYLD------------- 63
Query: 114 VPPVALFPNCLV---QRKVLYP--------FRKQVGGTILAAKLAKERGWAINVGGGFHH 162
ALF L QR++ +P F V GT+ AA+ A + G N+ GG HH
Sbjct: 64 ----ALFQGTLTEAEQRRLGFPWSPELVRRFAAAVAGTVDAARAALQDGIGGNLSGGTHH 119
Query: 163 CSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMF 222
D G GFC + DI++ I +I R +++DLD HQGNG F+ D V+ M
Sbjct: 120 GFPDHGEGFCVFNDIAVAIRALQASRDIRRAVVVDLDVHQGNGTAAVFAGDDSVFTFSMH 179
Query: 223 NPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKK----LDEALEVAGHTFDPELVIYNAGT 278
+P + + V + GT YL L E L+ AG ++ Y AG
Sbjct: 180 GENNFPFRKQPSQL---DVGLPDGTGDAAYLDALALYLPEVLDRAGAC----ILFYQAGV 232
Query: 279 DILEGDPLGMLKV 291
D L D LG L +
Sbjct: 233 DPLTEDALGRLSL 245
>gi|262276254|ref|ZP_06054063.1| histone deacetylase/AcuC/AphA family protein [Grimontia hollisae
CIP 101886]
gi|262220062|gb|EEY71378.1| histone deacetylase/AcuC/AphA family protein [Grimontia hollisae
CIP 101886]
Length = 304
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 120/263 (45%), Gaps = 25/263 (9%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LP+IY P Y S + + H + K+ + +L + F P+ + E L +H
Sbjct: 2 LPVIYHPIY--SDFPLPEGHRYPLQKYRLLRDYLDTHAFPVTEYRPRPINS--EVLKQIH 57
Query: 95 SESYLKSLQSSPNVSIIIEVPPVAL----FP--NCLVQRKVLYPFRKQVGGTILAAKLAK 148
Y+++L +P V + FP L+QR + +GGT L A
Sbjct: 58 DAGYVEALVKG-------TLPLVKMRRIGFPWSEALIQRSL-----TSLGGTTLVVDKAI 105
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEK 208
+ G AI++ GG+HH D G GFC + D+ L +A I +V+I+D D H G+G
Sbjct: 106 KHGVAIHLTGGYHHAHYDFGSGFCLFNDLVLAASHALTHEGIDKVLIVDCDVHHGDGTAT 165
Query: 209 DFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFD 268
+ S + + +P A D + + GTT++ YL L +A +
Sbjct: 166 LAAGRSDIVTFSVHCEKNFPSRKPAS---DIDLPLPMGTTSDAYLSAFIPCLTLALAQYQ 222
Query: 269 PELVIYNAGTDILEGDPLGMLKV 291
P+LVIY+AG DI + D LG L V
Sbjct: 223 PDLVIYDAGVDIHQDDELGYLNV 245
>gi|127513415|ref|YP_001094612.1| histone deacetylase superfamily protein [Shewanella loihica PV-4]
gi|126638710|gb|ABO24353.1| histone deacetylase superfamily [Shewanella loihica PV-4]
Length = 300
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 119/259 (45%), Gaps = 15/259 (5%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+PL+Y Y S L + H F +K+ + Q+L +D P S E L +H
Sbjct: 2 VPLVYHASY--SQLALPHHHRFPITKYQALYQYLLDRQIVDPTAFHSPEAVSLEWLKSIH 59
Query: 95 SESYLKSL--QSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
Y+ Q P+ ++ P++ L QR LY VGGT LA +LA G
Sbjct: 60 CPDYVMQFIEQRLPDKAVRRLGFPLS---ERLTQR-TLYS----VGGTHLACELAVRHGV 111
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
A+ + GG+HH G G+C + D+ +A I V+I D D HQG+G +
Sbjct: 112 ALQLSGGYHHAHYQFGSGYCVFNDLISAALHAQSLAGIVTVLIFDCDVHQGDGTAAMGQA 171
Query: 213 DSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELV 272
+Y + +P ++ D +E+ G EYL+ + + L +A + P+L+
Sbjct: 172 YDNLYTCSIHCQENFP---ARKQTSDLDLELSRGVGDEEYLEAVAQTLALAIRLYQPDLI 228
Query: 273 IYNAGTDILEGDPLGMLKV 291
IY+AG D+ + D LG L +
Sbjct: 229 IYDAGVDVHQADRLGHLNI 247
>gi|409202838|ref|ZP_11231041.1| histone deacetylase [Pseudoalteromonas flavipulchra JG1]
Length = 301
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 116/263 (44%), Gaps = 19/263 (7%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
LPL+Y +Y +F + H F SK+ R+ Q + + + N + P L V
Sbjct: 5 NLPLVYHANYSFNF---DPKHRFVMSKFARLYQEVDALRLIHNN-VYSPEPGDPSPLESV 60
Query: 94 HSESYLKSL---QSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKER 150
H E Y+ L Q + I +P + L+ R P GT+ A+LA +
Sbjct: 61 HCEQYIWDLWRNQLDAKMMRRIGLP----WSEQLMARTFTAPL-----GTLKTAELALKH 111
Query: 151 GWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDF 210
G A ++ GG HH D G GFC D++ + I+ +I DLD HQG+G
Sbjct: 112 GIACHLAGGTHHAHYDFGSGFCMVNDLAFTATHLLDNNQITNALIFDLDVHQGDGTAAML 171
Query: 211 SSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPE 270
+ VY + +P A D + + G + YL+ + LE +P+
Sbjct: 172 KHNPYVYTCSIHCEKNFPFRKHAS---DLDIGLEIGISDTHYLEIVAHTLESLLIDLNPD 228
Query: 271 LVIYNAGTDILEGDPLGMLKVKW 293
+V+Y+AG D+ +GD LG L + W
Sbjct: 229 IVLYDAGVDVWQGDNLGKLDISW 251
>gi|333892281|ref|YP_004466156.1| histone deacetylase superfamily protein [Alteromonas sp. SN2]
gi|332992299|gb|AEF02354.1| histone deacetylase superfamily protein [Alteromonas sp. SN2]
Length = 298
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 120/265 (45%), Gaps = 28/265 (10%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+PL++ P Y S L + + H F K+ I LSS G D + P + +L
Sbjct: 2 IPLVFHPIY--SQLSLPERHRFPIDKYQGIRNALSSHGVAD-SVFHTPSPLAITELECHF 58
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQ--------VGGTILAAKL 146
+ Y++ L S + R++ +P+ Q V GT L A+L
Sbjct: 59 DKDYVQQLTSGT--------------LDKKAMRRIGFPWSDQLIERTLTAVAGTCLTAEL 104
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
A + G A+N+ GG+HH +D G GFC + D+ L I V+IID D HQG+G
Sbjct: 105 AIKHGKALNLTGGYHHAFSDFGSGFCLFNDLFLAAKAMQKFSGIDNVLIIDFDVHQGDGT 164
Query: 207 EKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHT 266
K D+ ++ + + +P ++ + + + G +EYL + E L +
Sbjct: 165 AKLTQYDNSIFTVSVHGEKNFPY---RKQHSNIDIGMAKGCEDDEYLNAVQETLAMVAMQ 221
Query: 267 FDPELVIYNAGTDILEGDPLGMLKV 291
F + +IY+AG DI D LG+L +
Sbjct: 222 FQADAIIYDAGVDIHINDDLGLLNI 246
>gi|432891572|ref|XP_004075590.1| PREDICTED: uncharacterized protein SYNPCC7002_A1628-like [Oryzias
latipes]
Length = 341
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 117/267 (43%), Gaps = 31/267 (11%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LP+I+ Y + H F K+ R+ FL + + + + P AS++ L VH
Sbjct: 38 LPIIHHSKY---VCELPANHRFPMGKFPRVLHFLLKDQVITEKQVWVPEIASRDLLSCVH 94
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPF--------RKQVGGTILAAKL 146
+E YL S QR+ +P+ R + GGT+LAA+
Sbjct: 95 TEDYLNKFLSGKTSE--------------QEQRRTGFPWSEGIVSRCRYETGGTVLAAEA 140
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISR-VMIIDLDAHQGNG 205
A +RG A + GG HH G GFC D+++ Y R ++I+DLD HQG+G
Sbjct: 141 ALQRGLACSTAGGTHHAFPGYGSGFCLLNDLAVAAKYLKEDCPTKRKILIVDLDVHQGDG 200
Query: 206 HEKDFSSDSRVYILDMFNPGIYP-RDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAG 264
F + V+ + +P R E+ D + + G EYL ++ L
Sbjct: 201 TAFIFKEEPAVFTFSVHCGKNFPLRKQES----DLDISLEDGLEDEEYLSTVEAYLPWLL 256
Query: 265 HTFDPELVIYNAGTDILEGDPLGMLKV 291
TF P+LV+Y+AG D D LG L +
Sbjct: 257 QTFRPDLVLYDAGVDPHWEDELGRLHL 283
>gi|148556816|ref|YP_001264398.1| histone deacetylase superfamily protein [Sphingomonas wittichii
RW1]
gi|148502006|gb|ABQ70260.1| histone deacetylase superfamily [Sphingomonas wittichii RW1]
Length = 315
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 113/244 (46%), Gaps = 27/244 (11%)
Query: 56 FDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVP 115
F K+G + Q L+ G + +P + + VH Y+ + + VP
Sbjct: 20 FSFDKYGLVMQALAESGA--DPLLHQPDPMPRAWIEAVHDPDYVDEVAA-------CRVP 70
Query: 116 PVALFPNCLVQRKVLYPFRKQV--------GGTILAAKLAKERGWAINVGGGFHHCSADE 167
PV R++ +P ++V GGT LAAKLA G+A N GG HH AD
Sbjct: 71 PVK-------ARRIGFPVTERVARRAFLAPGGTWLAAKLALRHGYAANGAGGSHHAMADS 123
Query: 168 GGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIY 227
G G+C + D+++ + V+ + +R+MI+DLD HQG+G + ++ + + +
Sbjct: 124 GAGYCVFNDLAIAANRLIVERDAARIMIVDLDVHQGDGTAVLTAGRPDIFTFSIHSERNF 183
Query: 228 PRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLG 287
P +AR D + + T +YL L L A F P+L++Y AG D D LG
Sbjct: 184 PA-RKARSSFD--LGLPDDTDDADYLAALAGHLPAAIDAFAPDLILYQAGVDPHREDKLG 240
Query: 288 MLKV 291
L +
Sbjct: 241 RLAL 244
>gi|428301891|ref|YP_007140197.1| histone deacetylase [Calothrix sp. PCC 6303]
gi|428238435|gb|AFZ04225.1| Histone deacetylase [Calothrix sp. PCC 6303]
Length = 303
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 118/266 (44%), Gaps = 30/266 (11%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LP+IY PDY + + H F +K+ + L ++G +P ++ + ++H
Sbjct: 3 LPIIYHPDYVTE---LPEGHRFPMAKFSLLYDLLLADGVAKSEQFYQPTIPQQDLIELIH 59
Query: 95 SESYLKS-LQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRK--------QVGGTILAAK 145
+ Y+ + Q + + QR++ P+ + VGGTIL A+
Sbjct: 60 TPEYVNAYCQGTLDEK---------------AQRRIGLPWSRGLVNRTCTAVGGTILTAQ 104
Query: 146 LAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A E G A N GG HH D G GFC + D+++ Q R++I+DLD HQG+G
Sbjct: 105 KALECGLACNTAGGTHHAFPDYGSGFCIFNDLAIACRVLQRQHLAKRILIVDLDVHQGDG 164
Query: 206 HEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGH 265
F D V+ M +P ++ D V + G + YL+ L L
Sbjct: 165 TAFIFQDDDSVFTFSMHCEVNFP---GTKQKSDLDVPLPVGMEDDAYLQTLASYLPDLLS 221
Query: 266 TFDPELVIYNAGTDILEGDPLGMLKV 291
P++V+Y+AG D GD LG L +
Sbjct: 222 QVKPDIVLYDAGVDPHIGDKLGKLAL 247
>gi|433777117|ref|YP_007307584.1| deacetylase, histone deacetylase/acetoin utilization protein
[Mesorhizobium australicum WSM2073]
gi|433669132|gb|AGB48208.1| deacetylase, histone deacetylase/acetoin utilization protein
[Mesorhizobium australicum WSM2073]
Length = 300
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 117/260 (45%), Gaps = 18/260 (6%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCI--VEPLEASKEDLLV 92
L +++ PDYD F H F SK+ + + L + G + EP AS L +
Sbjct: 3 LQIVHHPDYDAGF---ATSHRFPMSKYPLLMEALRARGLAGAGALNTAEPAPASW--LKL 57
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
H+ Y++ + S+ ++ FP V +V + GGT+ AA+LA G
Sbjct: 58 AHATDYVEQVL---GCSVPEKIEREIGFP---VGPRVSLRAQLAAGGTVAAARLALRHGI 111
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
A N GG HH +G GFC + D+++ + ++++DLD HQG+G
Sbjct: 112 ACNTAGGSHHARRAQGAGFCTFNDVAVASLVLLEEGAAHSILVVDLDVHQGDGTADILGD 171
Query: 213 DSRVYILDMFNPGIYPRDYEARRFI-DQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPEL 271
+ R + M R+Y AR+ D V + GT Y+++LD L ++
Sbjct: 172 EPRAFTFSMHG----ERNYPARKIASDLDVALPDGTGDAAYVERLDTILLELSAQARWDI 227
Query: 272 VIYNAGTDILEGDPLGMLKV 291
V YNAG D+ D LG L +
Sbjct: 228 VFYNAGVDVHAEDRLGRLSL 247
>gi|145298536|ref|YP_001141377.1| histone deacetylase/AcuC/AphA family protein [Aeromonas salmonicida
subsp. salmonicida A449]
gi|418362734|ref|ZP_12963359.1| histone deacetylase/AcuC/AphA family protein [Aeromonas salmonicida
subsp. salmonicida 01-B526]
gi|142851308|gb|ABO89629.1| Histone deacetylase/AcuC/AphA family protein [Aeromonas salmonicida
subsp. salmonicida A449]
gi|356686045|gb|EHI50657.1| histone deacetylase/AcuC/AphA family protein [Aeromonas salmonicida
subsp. salmonicida 01-B526]
Length = 309
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 118/259 (45%), Gaps = 15/259 (5%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
L + + P Y S L + + H F +K+ + Q LS+ G+ + E A++ +
Sbjct: 1 MSLCIFHHPYY--SSLALPERHRFPLAKYQALFQTLSTRGY----PLQETQAATRAQIDR 54
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
VH Y+ + + I P L++R +L VG T+ A++ A E+G
Sbjct: 55 VHDSDYVSAALAGQLDDNAIRQLGFPWSPR-LIERTLL-----SVGATLAASRHALEQGC 108
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
+ + GG+HH G GFC + D+ + + +V+I+DLD HQG+G +
Sbjct: 109 GLQISGGYHHAHRAHGSGFCLFNDLVIAAQTCLDEGRCDQVLIVDLDVHQGDGSAALCAG 168
Query: 213 DSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELV 272
+ L + +PR A + SG + YL L +AL +A ++P+LV
Sbjct: 169 RRYIITLSLHGEHNFPRHKPASHL---DFALPSGMQDDAYLDTLAQALTLALRLYNPDLV 225
Query: 273 IYNAGTDILEGDPLGMLKV 291
+Y AG D+ D LG L +
Sbjct: 226 LYQAGVDVHHADELGYLAL 244
>gi|409201964|ref|ZP_11230167.1| histone deacetylase/AcuC/AphA family protein [Pseudoalteromonas
flavipulchra JG1]
Length = 301
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 124/263 (47%), Gaps = 19/263 (7%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLL-VVHS 95
L Y P Y S L + + H F SK+ ++ Q +++ F I EP + D L + H
Sbjct: 2 LYYHPIY--SELSLPEKHRFPISKYKKLYQRINASRF--AKFIKEPEQKITADALQLCHD 57
Query: 96 ESYLKSLQSSPNVSIIIEVPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKERGWA 153
+Y+ N ++ + FP LV+R ++ +GG + AAK A E G+
Sbjct: 58 SNYVDGFL---NGTLSEKAIKKMGFPWSEQLVERTLI-----SLGGGLAAAKYALEYGFG 109
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSD 213
N+ GG+HH D G GFC + D ++ + RV+I D D HQG+G +
Sbjct: 110 ANLSGGYHHAHRDFGSGFCIFNDWAVVAATLIAHQRVERVLIFDCDVHQGDGTATIVADR 169
Query: 214 SRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVI 273
+ + + +PR + D + T +Y+ + EAL++A + P++++
Sbjct: 170 NDIITCSIHCESNFPR---IKPQSDLDFALPVNTQDAQYVATVREALQLAVRLYQPDIIL 226
Query: 274 YNAGTDILEGDPLGMLKV-KWGV 295
YNAG D+ +GD LG V K GV
Sbjct: 227 YNAGADVYQGDELGHFSVSKQGV 249
>gi|359449448|ref|ZP_09238941.1| histone deacetylase family protein [Pseudoalteromonas sp. BSi20480]
gi|358044758|dbj|GAA75190.1| histone deacetylase family protein [Pseudoalteromonas sp. BSi20480]
Length = 299
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 122/259 (47%), Gaps = 14/259 (5%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+ L Y P Y S L + + H F K+ R+ + GFL +P +A L + H
Sbjct: 1 MQLYYHPLY--SNLPLPEKHRFPIQKYQRLKTEIEHLGFL-PTAFKQPAKARPSQLALCH 57
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAI 154
SE Y+ + + N+S + LV+R +L VGG+I AA+ A + G
Sbjct: 58 SEQYINNFLTG-NLSDKAIKKMGFPYSAQLVERTLL-----SVGGSIQAAEEALKSGLTC 111
Query: 155 NVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDS 214
N+ GG+HH +D G GFC + D+++ + V+I D D HQG+G + + S
Sbjct: 112 NLSGGYHHAYSDYGSGFCIFNDLAIAATHLLNTHKAKTVLIFDCDVHQGDGTAQIINQQS 171
Query: 215 RVYIL--DMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELV 272
I+ + +PR ++ D + + + +EY+ L AL + P+++
Sbjct: 172 HKNIITCSIHCEQNFPR---LKQQSDYDFSLPAKSGDDEYIDTLQHALALCVSIHQPDII 228
Query: 273 IYNAGTDILEGDPLGMLKV 291
+YNAG DI D LG+L V
Sbjct: 229 LYNAGADIYTKDELGLLNV 247
>gi|402831312|ref|ZP_10880001.1| histone deacetylase family protein [Capnocytophaga sp. CM59]
gi|402282578|gb|EJU31116.1| histone deacetylase family protein [Capnocytophaga sp. CM59]
Length = 300
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 107/243 (44%), Gaps = 19/243 (7%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLK-----SLQSSPNV 108
H F K+ + + L EG + P + + L + H+ +Y++ +L+ +
Sbjct: 17 HRFPMEKYALLHEQLLWEGIATEADFFAPEKVALSSLYLAHTPAYVQDFVGQTLEERTRI 76
Query: 109 SIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEG 168
I + L+ R++ V GTI A A E A N+ GG HH +D G
Sbjct: 77 RIGF------VQSQQLIDRELTL-----VQGTIEGALYALEGQVAFNIAGGTHHAYSDRG 125
Query: 169 GGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
GFC D ++ Y + RV+IIDLD HQGNG + F+ V+ M G YP
Sbjct: 126 EGFCMLNDQAVAAAYLLDKGKAQRVLIIDLDVHQGNGTAEIFAQKPAVFTFSMHAQGNYP 185
Query: 229 RDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGM 288
E D + + GT + Y+ +L E L P+ V Y +G D+LE D G
Sbjct: 186 FVKEQS---DMDIALPDGTGDDAYITQLREVLPELFEKHQPDFVFYQSGVDVLESDKFGK 242
Query: 289 LKV 291
L++
Sbjct: 243 LRL 245
>gi|336314525|ref|ZP_08569442.1| deacetylase, histone deacetylase/acetoin utilization protein
[Rheinheimera sp. A13L]
gi|335881065|gb|EGM78947.1| deacetylase, histone deacetylase/acetoin utilization protein
[Rheinheimera sp. A13L]
Length = 319
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 92/173 (53%), Gaps = 12/173 (6%)
Query: 127 RKVLYPFRKQ--------VGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADIS 178
R++ +P+ +Q VGGT+ +LA ++G A+++ GG+HH EG GFC + D++
Sbjct: 82 RRIGFPWSEQLVTRSLTSVGGTVQTVQLALQQGLALHLSGGYHHAFVGEGSGFCLFNDLA 141
Query: 179 LCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFID 238
+ YA Q + +V+I D D HQG+G FS + + + +P + +
Sbjct: 142 VAARYALTQ-GVDKVLIFDCDVHQGDGTAAIFSDEPAIITASLHGEKNFPARKQQSSW-- 198
Query: 239 QKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ + + T EYL + ++LE P+LVI++AG DI + D LG+L +
Sbjct: 199 -DLGLPTACTDGEYLAAVKQSLEYLLRIHQPDLVIFDAGIDIHQQDDLGLLHI 250
>gi|381203585|ref|ZP_09910691.1| histone deacetylase [Sphingobium yanoikuyae XLDN2-5]
Length = 300
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 117/240 (48%), Gaps = 27/240 (11%)
Query: 60 KWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVAL 119
K+G + L+ G +P+ AS + VH +Y++ + + + VPP
Sbjct: 24 KYGLVMDVLAESGAPMTVHAPDPMPASW--IAAVHDPAYVEEV-------LALAVPPEK- 73
Query: 120 FPNCLVQRKVLYPFRKQV--------GGTILAAKLAKERGWAINVGGGFHHCSADEGGGF 171
+R++ +P ++V GGT LAAKLA G+A N GG HH AD G G+
Sbjct: 74 ------ERRIGFPVTERVMRRALLSPGGTWLAAKLALVHGYAANAAGGSHHALADSGAGY 127
Query: 172 CAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDY 231
C + D+++ + + +++R++I+DLD HQG+G + V+ L + +P
Sbjct: 128 CVFNDLAIAANRLIAEGDVNRILILDLDVHQGDGTASLMAGRGDVFTLSIHAEKNFPV-R 186
Query: 232 EARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+AR +D + + T +YL L E L + F P+L++Y AG D D LG L +
Sbjct: 187 KARSTLD--LGLADDTGDADYLAALGEMLPRVLNDFVPDLILYQAGVDGHVDDRLGRLAL 244
>gi|402495659|ref|ZP_10842382.1| histone deacetylase [Aquimarina agarilytica ZC1]
Length = 300
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 112/246 (45%), Gaps = 21/246 (8%)
Query: 50 IEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVS 109
++K H F K+ + + L EG + EP ++ D+L VH+E Y +L++
Sbjct: 14 LKKGHRFPMEKYDLLPKQLLHEGTCTVDNFFEPKIVAETDVLRVHTEEYFFNLRA----- 68
Query: 110 IIIEVPPVAL----FP--NCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHC 163
+ +P + FP LV R+++ G+I A K A G A+N+ GG HH
Sbjct: 69 --LNLPKSEVRAIGFPLSETLVNRELII-----TQGSIDACKYAITNGIAMNIAGGTHHA 121
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
++ G FC D ++ Y +++I+DLD HQGNG + F +S+V+ M
Sbjct: 122 FSNRGEAFCLLNDQAVAAAYLLHHKLAKKILIVDLDVHQGNGTAEIFKHNSKVFTFSMHG 181
Query: 224 PGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEG 283
YP E D + + +GT YL L L P+ V Y +G DIL
Sbjct: 182 EKNYPFRKEIS---DLDIALPNGTDDQSYLSVLKRTLPKLFKQEQPDFVFYLSGVDILVS 238
Query: 284 DPLGML 289
D LG L
Sbjct: 239 DKLGKL 244
>gi|397169769|ref|ZP_10493199.1| histone deacetylase superfamily protein [Alishewanella aestuarii
B11]
gi|396088664|gb|EJI86244.1| histone deacetylase superfamily protein [Alishewanella aestuarii
B11]
Length = 312
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 126/260 (48%), Gaps = 19/260 (7%)
Query: 36 PLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHS 95
PLIY P Y S L + H + K+ + Q L + G D + P + L ++H
Sbjct: 7 PLIYHPCY--SELTLPANHRYPIGKYRTLYQRLLALGVPD-SAFYLPQAIKAQALELLHE 63
Query: 96 ESYLKSL-QSSPNVSIIIEVPPVALFPNC--LVQRKVLYPFRKQVGGTILAAKLAKERGW 152
+Y+ +L Q + + + + FP L+ R + +GGT+L A+LA E+G
Sbjct: 64 PAYVNALCQGTLDARAMRRIG----FPWSPELITRSL-----TSLGGTLLCAELALEQGL 114
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
A+++ GG+HH EG GFC + D++ + Q I ++I D D HQG+G F+
Sbjct: 115 ALHLSGGYHHAFYAEGSGFCLFNDLAFAA-LSIQQRGIGPILIFDCDVHQGDGSAALFAD 173
Query: 213 DSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELV 272
+S + + +P ++ D + + T YL+ + ++L+ + PELV
Sbjct: 174 NSGIITASLHCEKNFP---ARKQRSDWDIGLERDCTDQTYLEAVSQSLDTLLRWYQPELV 230
Query: 273 IYNAGTDILEGDPLGMLKVK 292
+Y+AG DI D LG+L +
Sbjct: 231 LYDAGVDIHRQDDLGLLNIS 250
>gi|321496307|gb|EAQ39532.2| deacetylase [Dokdonia donghaensis MED134]
Length = 300
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 107/244 (43%), Gaps = 25/244 (10%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ + + L EG + EP++ + E +L H+ Y+ +L++ +
Sbjct: 18 HRFPMEKYDLLPKQLVYEGTCIADNFFEPVQVAHEHILRCHTTEYVDNLKA-------LT 70
Query: 114 VPPVALFPNCLVQRKVLYPFRKQV--------GGTILAAKLAKERGWAINVGGGFHHCSA 165
+ P A QRK +P +++ GTI A E G A+N+ GG HH
Sbjct: 71 IDPRA-------QRKTGFPLSQELVDRELIITQGTIDGCHYALENGIAMNIAGGTHHAYT 123
Query: 166 DEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
D G FC D ++ Y +++I+DLD HQGNG + F+ D V+ M
Sbjct: 124 DHGEAFCLLNDQAIAARYLQANELAKKILIVDLDVHQGNGTAEIFAGDDSVFTFSMHGKA 183
Query: 226 IYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDP 285
YP E +D +E +G EYL L + L P+ + Y G DIL D
Sbjct: 184 NYPFRKEISN-LDIALETDTGDV--EYLGILKKTLPNLIKEQQPDFIFYLCGVDILASDK 240
Query: 286 LGML 289
LG L
Sbjct: 241 LGKL 244
>gi|449018659|dbj|BAM82061.1| unknown deacetylase [Cyanidioschyzon merolae strain 10D]
Length = 369
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 111/243 (45%), Gaps = 16/243 (6%)
Query: 54 HPFDSSKWGRICQFLSSEG-FLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIII 112
H F +K+ + + L ++ F +V PL A +D+L+VHS+ Y+ I
Sbjct: 64 HRFPMAKYELVRRKLEADSSFKGVPFLVSPL-AELDDILLVHSKDYVDRFIKGKLSDI-- 120
Query: 113 EVPPVAL-FPNCLVQRKVLYPFRKQVGGTILAAK--LAKERGWAINVGGGFHHCSADEGG 169
EV + + LVQR + VGGT+ + + A + GG HH D G
Sbjct: 121 EVRRIGFPWSTALVQRTL-----ASVGGTVACMRDVVEGRSRCAAQIAGGTHHAFPDHGE 175
Query: 170 GFCAYADISLCIHYAFVQL-NISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
GFC + DI++ A + R++++DLD HQGNG F DSRV+ G YP
Sbjct: 176 GFCVFNDIAIAARVALRDYAQVRRILVLDLDVHQGNGVAAIFQGDSRVFTCSFHGHGNYP 235
Query: 229 RDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGM 288
+ D +E T +YL+ L+ L DP+LV Y AG D L D LG
Sbjct: 236 FRKQKS---DLDIEFEDNTDDTDYLQILEVWLPRIMAKHDPDLVFYQAGVDALAEDKLGR 292
Query: 289 LKV 291
L +
Sbjct: 293 LAL 295
>gi|67925050|ref|ZP_00518430.1| Histone deacetylase superfamily [Crocosphaera watsonii WH 8501]
gi|67853097|gb|EAM48476.1| Histone deacetylase superfamily [Crocosphaera watsonii WH 8501]
Length = 305
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 121/265 (45%), Gaps = 24/265 (9%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LP++Y Y + + H F K+ + + L E +D N I P L +
Sbjct: 1 MNLPIVYDHQYVVP---LPNGHRFPMGKFSLLYELLLKEKIIDFNDIYTPKLPENSLLEL 57
Query: 93 VHSESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
VH Y+ + I +P + LV+R + VGGTIL AKLA +
Sbjct: 58 VHCPDYITGYCQGTLTDKAQRRIGLP----WSEALVKRTCI-----AVGGTILTAKLALK 108
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISL--CIHYAFVQLN-ISRVMIIDLDAHQGNGH 206
G A N GG HH + G GFC + D+++ C+ QL + +V+IIDLD HQG+G
Sbjct: 109 FGLACNTAGGTHHAFPNYGSGFCIFNDLAIATCV---LQQLKLVQKVLIIDLDVHQGDGT 165
Query: 207 EKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHT 266
K F +D V+ M +PR+ + D V + G + YL+ L + L
Sbjct: 166 AKIFENDETVFTFSMHCESNFPREKQKS---DLDVALPKGLDDDGYLQILSQYLPDLLSE 222
Query: 267 FDPELVIYNAGTDILEGDPLGMLKV 291
P+L++Y+AG DI D G L +
Sbjct: 223 IKPDLILYDAGVDIHANDHFGKLSL 247
>gi|26991445|ref|NP_746870.1| histone deacetylase superfamily protein [Pseudomonas putida KT2440]
gi|24986520|gb|AAN70334.1|AE016675_4 histone deacetylase family protein [Pseudomonas putida KT2440]
Length = 304
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 117/261 (44%), Gaps = 20/261 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G ++ P + L + H
Sbjct: 3 LPLIYHEDYSPEF---PAEHRFPMDKFRLLHDHLVGSGLTTDQALLRPDICPNDILALAH 59
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
SY++ + S + +P + L +R V + VGG++L A++A + G
Sbjct: 60 DRSYIERYMNGELSREDQRRLGLP----WSEALARRTV-----RAVGGSLLTAEMALQHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A ++ GG HH D GFC + D+++ Y + RV+I D D HQG+G +
Sbjct: 111 IACHLAGGTHHAHYDHPAGFCIFNDLAVISRYLLEAGRVHRVLIFDCDVHQGDGTARILH 170
Query: 212 SDSRVYILDMFNPGIYPRDYEARRF-IDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPE 270
+ + +P AR+ D + + G YLK +D+AL + P+
Sbjct: 171 DTPEAITVSLHCEQNFP----ARKAQSDWDIPLPRGMGDTAYLKVVDDALNYLLPLYQPD 226
Query: 271 LVIYNAGTDILEGDPLGMLKV 291
LV+Y+AG D+ + D LG L++
Sbjct: 227 LVLYDAGVDVHKDDALGYLQL 247
>gi|404401075|ref|ZP_10992659.1| histone deacetylase [Pseudomonas fuscovaginae UPB0736]
Length = 306
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 119/261 (45%), Gaps = 20/261 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G ++ P + L + H
Sbjct: 3 LPLIYHDDYSPEF---PPEHRFPMDKFRLLRDHLVDSGLTRDQELLRPDLCPVDILTLAH 59
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
Y++ ++ S + +P + L +R + + VGG++LAA+ A E G
Sbjct: 60 DRDYIERYRAGELSREDQRRLGLP----WSEALARRTI-----RAVGGSLLAAEQALEHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A ++ GG HH D GFC + D+++ Y +SRV+I D D HQG+G +
Sbjct: 111 LACHLAGGTHHAHYDHPAGFCIFNDLAVISRYFLESGRVSRVLIFDCDVHQGDGTARILE 170
Query: 212 SDSRVYILDMFNPGIYPRDYEARRF-IDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPE 270
+ + +P AR+ D + + G +YL+ +D+AL + P+
Sbjct: 171 DTPEAITVSLHCEKNFP----ARKAQSDWDIPLPMGMGDADYLRVVDDALNYLLPLYQPD 226
Query: 271 LVIYNAGTDILEGDPLGMLKV 291
LV+Y+AG D+ + D LG LK+
Sbjct: 227 LVLYDAGVDVHKDDALGYLKL 247
>gi|427408837|ref|ZP_18899039.1| hypothetical protein HMPREF9718_01513 [Sphingobium yanoikuyae ATCC
51230]
gi|425713147|gb|EKU76161.1| hypothetical protein HMPREF9718_01513 [Sphingobium yanoikuyae ATCC
51230]
Length = 300
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 116/240 (48%), Gaps = 27/240 (11%)
Query: 60 KWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVAL 119
K+G + L+ G +P+ AS + VH +Y++ + + + VPP
Sbjct: 24 KYGLVMDVLADSGAPMTVHAPDPMPASW--IAAVHDPAYVEEV-------LTLAVPPDK- 73
Query: 120 FPNCLVQRKVLYPFRKQV--------GGTILAAKLAKERGWAINVGGGFHHCSADEGGGF 171
+R++ +P ++V GGT LAAKLA G+A N GG HH AD G G+
Sbjct: 74 ------ERRIGFPVTERVMRRALLSPGGTWLAAKLALVHGYAANAAGGSHHALADSGAGY 127
Query: 172 CAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDY 231
C + D+++ + + +++R++I+DLD HQG+G + V+ + + +P
Sbjct: 128 CVFNDLAIAANRLIAEGDVNRILILDLDVHQGDGTASLMAGRGDVFTMSIHAEKNFPV-R 186
Query: 232 EARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+AR +D + + T +YL L E L F P+L++Y AG D D LG L +
Sbjct: 187 KARSTLD--LGLADDTGDADYLAALGEMLPRVLDDFAPDLILYQAGVDGHVDDRLGRLAL 244
>gi|119897892|ref|YP_933105.1| histone deacetylase family protein [Azoarcus sp. BH72]
gi|119670305|emb|CAL94218.1| histone deacetylase family protein [Azoarcus sp. BH72]
Length = 305
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 108/240 (45%), Gaps = 13/240 (5%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ R+ L + G + EP A+ +L H +Y+ + + E
Sbjct: 17 HRFPMEKYSRLRARLVASGVFGDGDLREPAAATDAELARAHDPAYVARVAQGELAAD--E 74
Query: 114 VPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGF 171
+ + FP +V+R R+ G T+ A + A + G IN+ GG HH D G GF
Sbjct: 75 IRRIG-FPWSEAMVERS-----RRSAGATLAACRSALDEGCGINLAGGTHHAHRDFGSGF 128
Query: 172 CAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDY 231
C + D ++ + + RV ++D D HQG+G + V+ + +P
Sbjct: 129 CVFNDAAVAALAMRAEGRVQRVAVVDCDVHQGDGTAAILAGVPEVFTCSLHGAKNFPF-R 187
Query: 232 EARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+AR +D VE+ T YL LD ALE F P+L+IY AG D GD LG L +
Sbjct: 188 KARSDLD--VELPDDTGDEPYLAALDNALERVFSEFRPQLLIYLAGADPYAGDRLGRLAL 245
>gi|86148483|ref|ZP_01066772.1| histone deacetylase/AcuC/AphA family protein [Vibrio sp. MED222]
gi|85833723|gb|EAQ51892.1| histone deacetylase/AcuC/AphA family protein [Vibrio sp. MED222]
Length = 306
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 127/273 (46%), Gaps = 38/273 (13%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNC-------IVEPLEASK 87
+PLIY P Y S L + + H + +K+ + + E +D + + +P+ S
Sbjct: 2 IPLIYHPIY--SQLPLPEGHRYPINKY--LLLHSAVEALMDSDPQWGNAFEMFQPMPVSV 57
Query: 88 EDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GG 139
E + VH Y+ L S +P + R++ +P+ +Q+ GG
Sbjct: 58 EQVKQVHDGEYVDLLVSG-------NLPAAKM-------RRIGFPWSEQLIERTLYSSGG 103
Query: 140 TILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLD 199
T LAA++A E G AI++ GG+HH D G GFC D+ L +A +I +V+I+D D
Sbjct: 104 TCLAAEMAIESGLAIHLSGGYHHAHRDFGSGFCLLNDLVLAAKHALTFEHIDKVLIVDSD 163
Query: 200 AHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARR-FIDQKVEVVSGTTTNEYLKKLDE 258
H G+G + L +P AR+ D V + T E+L+ ++
Sbjct: 164 VHHGDGTATLCQESDEIITLSFHCDKNFP----ARKPLSDLDVPLSRETEDEEFLRCFEQ 219
Query: 259 ALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
++A P+L+IY+AG DI + D LG L V
Sbjct: 220 VTKLAIAHHQPDLIIYDAGIDIHQDDELGYLNV 252
>gi|55980021|ref|YP_143318.1| deacetylase [Thermus thermophilus HB8]
gi|55771434|dbj|BAD69875.1| putative deacetylase [Thermus thermophilus HB8]
Length = 294
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/242 (33%), Positives = 118/242 (48%), Gaps = 22/242 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQS---SPNVSI 110
HPF K+G + + L +G L ++ E +E L + H SYL+ L S S+
Sbjct: 17 HPFPLYKYGGVAEAL--KGLL---PVLPAPEVPREALFLAHEASYLEKLFGEGLSREESL 71
Query: 111 IIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGG 170
+ +P F L++R + GGT+ AA A + G +N+ GG HH G
Sbjct: 72 RLGLP----FSQALLRRAL-----HAAGGTLAAALDALKTGLGLNLSGGTHHAFPGRAEG 122
Query: 171 FCAYADISLCIHYAFVQLNIS-RVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPR 229
+ + D+++ I + + S RV+++DLDAHQGNG F D V+ L + YP
Sbjct: 123 YSLFNDVAVAIFWLRAKEGFSGRVLVVDLDAHQGNGTAFFFREDPSVFTLSLHGERNYPL 182
Query: 230 DYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGML 289
E D V + GT YL L+ ALE A F P+LV YNAG D+L+GD G L
Sbjct: 183 KKEKS---DLDVGLPDGTGDEAYLWALEGALEKA-RAFRPDLVFYNAGVDVLKGDRFGRL 238
Query: 290 KV 291
+
Sbjct: 239 AL 240
>gi|331005118|ref|ZP_08328521.1| putative histone deacetylase family protein [gamma proteobacterium
IMCC1989]
gi|330421087|gb|EGG95350.1| putative histone deacetylase family protein [gamma proteobacterium
IMCC1989]
Length = 223
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 8/168 (4%)
Query: 124 LVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHY 183
LV+R ++ P GT L A+LA + G A ++ GG HH D GFC + D+++
Sbjct: 9 LVKRTLISP-----NGTFLTAQLALKHGIACHLAGGTHHAHVDFASGFCIFNDLAITAKA 63
Query: 184 AFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
Q +++++I D D HQG+G + R Y + +P + D V +
Sbjct: 64 LLAQGKVNKILIFDCDVHQGDGTASILQHEKRAYTCSIHCEKNFP---AKKALSDFDVGL 120
Query: 244 VSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
GT+ EYL + L+VA P+L++Y+AG DI + DPLG+L +
Sbjct: 121 PPGTSDKEYLDCVQSTLDVAIKNQQPDLILYDAGVDIYQHDPLGLLNI 168
>gi|330830255|ref|YP_004393207.1| histone deacetylase/AcuC/AphA family protein [Aeromonas veronii
B565]
gi|423209075|ref|ZP_17195629.1| hypothetical protein HMPREF1169_01147 [Aeromonas veronii AER397]
gi|328805391|gb|AEB50590.1| Histone deacetylase/AcuC/AphA family protein [Aeromonas veronii
B565]
gi|404618920|gb|EKB15840.1| hypothetical protein HMPREF1169_01147 [Aeromonas veronii AER397]
Length = 298
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 120/259 (46%), Gaps = 15/259 (5%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
L + Y P Y S L + + H F +K+ + + L +G+ + E A+ E +
Sbjct: 1 MSLRIFYHPLY--SSLTLPERHRFPLAKYQGLFERLQVQGYP----LGEAPAATCEQICR 54
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
+H Y+ + S I P L +R + + VG T+ A++ A E+G
Sbjct: 55 IHDADYVAAALSGQLEDRAIRKIGFPWSPM-LTERTL-----RSVGATVAASRHALEQGC 108
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
+ + GG+HH D G GFC + D+ + + +V+I+DLD HQG+G +
Sbjct: 109 GLQISGGYHHAHRDHGSGFCLFNDLVIAAQACLDEGRCEQVLIVDLDVHQGDGSAALCAG 168
Query: 213 DSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELV 272
+ L + +P ++A +D + SG T + YL L +AL +A + P+L+
Sbjct: 169 RRDIITLSLHGEHNFPH-HKATSHLD--FPLPSGMTDDAYLTTLQQALSLALRLYSPDLI 225
Query: 273 IYNAGTDILEGDPLGMLKV 291
+Y AG D+ D LG L +
Sbjct: 226 LYQAGVDVHHADELGYLSL 244
>gi|389695472|ref|ZP_10183114.1| deacetylase, histone deacetylase/acetoin utilization protein
[Microvirga sp. WSM3557]
gi|388584278|gb|EIM24573.1| deacetylase, histone deacetylase/acetoin utilization protein
[Microvirga sp. WSM3557]
Length = 303
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 117/259 (45%), Gaps = 15/259 (5%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
++P++ P Y + H F K+GR+ + ++ +G L +P EAS E + +
Sbjct: 3 QVPIVSHPAYQAV---MPDGHRFPMRKYGRLAEIIAEKG-LAPGGFAKPEEASAELIALA 58
Query: 94 HSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWA 153
H +Y+ + + S+ E+ P + V+ R GGT+LAA+LA + G +
Sbjct: 59 HDRAYVDQVFAG---SVPHEIERRIGLP---MSESVVRRARASAGGTLLAARLALQHGLS 112
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSD 213
+ GG HH + G GFC + D+++ + I +I+DLD HQG+G +
Sbjct: 113 GSTAGGSHHGQRETGAGFCVFNDVAIAAKALHAEGAIRHALIVDLDVHQGDGTADCLRDE 172
Query: 214 SRVYILDMFNPGIYPRDYEARRF-IDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELV 272
++ M YP R+ D V + + YL+ L L +P+LV
Sbjct: 173 PDLFTFSMHAEKNYP----LRKIPSDLDVGLPDAMEDDAYLEALQAHLPRLLDAIEPDLV 228
Query: 273 IYNAGTDILEGDPLGMLKV 291
+NAG D D LG L +
Sbjct: 229 FFNAGVDPHRDDKLGRLAL 247
>gi|240137289|ref|YP_002961758.1| histone deacetylase family protein [Methylobacterium extorquens
AM1]
gi|240007255|gb|ACS38481.1| Histone deacetylase family protein [Methylobacterium extorquens
AM1]
Length = 297
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 119/263 (45%), Gaps = 29/263 (11%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+P+++ P Y+ + + H F K+GR+ + L + G + + V P A L H
Sbjct: 2 IPIVFHPAYEAE---LPEGHRFPMRKYGRLAEILRARGLV-PDGFVTPEPADAALLSGAH 57
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTILAAKL 146
+Y+ ++ ++ +VP V ++R + P + V GGT+ AA+L
Sbjct: 58 DPAYVAAVLAA-------QVPRV-------IERAIGLPVTEAVAARACASAGGTLRAARL 103
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
A G A + GG HH G GFC + D+++ + I+R +I+DLD HQG+G
Sbjct: 104 ALSHGLAGSTAGGSHHARRAGGAGFCVFNDVAVAALALRREGAITRALIVDLDVHQGDGT 163
Query: 207 EKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHT 266
+ + ++ L + YP D + D + + G EY L+ L
Sbjct: 164 ADCLAREPDLFTLSIHCERNYPHD---KVPGDLDIGLPDGLDDAEYFAVLEARLPALVQN 220
Query: 267 FDPELVIYNAGTDILEGDPLGML 289
F P+L+ YNAG D D LG L
Sbjct: 221 FAPDLIFYNAGVDPHRDDRLGRL 243
>gi|345867518|ref|ZP_08819529.1| histone deacetylase domain protein [Bizionia argentinensis JUB59]
gi|344048186|gb|EGV43799.1| histone deacetylase domain protein [Bizionia argentinensis JUB59]
Length = 300
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 109/240 (45%), Gaps = 13/240 (5%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ + + L EG + EP+ +L VH+ Y L N+++ +
Sbjct: 18 HRFPMLKYELLPKQLLYEGTCSEANFFEPVIPDDRYILQVHTAEYYNHLL---NLTLDAK 74
Query: 114 VPPVALFPNC--LVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGF 171
FP L++R+V+ GTI A+K A E G A+N+ GG HH ++ G GF
Sbjct: 75 AARKIGFPLSAELIKREVII-----ADGTIKASKFALENGIAMNIAGGTHHAYSNRGEGF 129
Query: 172 CAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDY 231
C D ++ Y +++I+DLD HQGNG + F +D V+ M YP
Sbjct: 130 CLLNDQAIAARYLQKHQLAEKILIVDLDVHQGNGTAEIFQNDPSVFTFSMHGKSNYPFKK 189
Query: 232 EARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
E D + + + + EYL L E L + P+ + Y G D++ D LG L +
Sbjct: 190 EES---DLDIALETDSNDQEYLSILKETLPKLIASEKPDFIYYLCGVDVMATDKLGKLAL 246
>gi|350531992|ref|ZP_08910933.1| hypothetical protein VrotD_12733 [Vibrio rotiferianus DAT722]
Length = 317
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 126/268 (47%), Gaps = 29/268 (10%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQF----LSSEGFLDKNCIVEPLEASKEDL 90
LPLIY P Y S L + + H + K+ + Q L+ +G+ ++ +P S +D+
Sbjct: 2 LPLIYHPIY--SQLELAEGHRYPIMKYHYLYQAVVEKLAIKGWGEQIEFFQPNPLSVDDI 59
Query: 91 LVVHSESYLKSLQSSPNVSIIIEVPPVAL----FP--NCLVQRKVLYPFRKQVGGTILAA 144
VHS Y+ L + +P V + FP L+ R + GT+L A
Sbjct: 60 KRVHSGEYVDLLVTG-------SMPAVKMRRIGFPWSEALIARTL-----TSTAGTVLTA 107
Query: 145 KLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
++A E G AI++ GG+HH D G GFC + D+++ + +I +VMIID D H G+
Sbjct: 108 EMALEHGVAIHLSGGYHHAHKDFGSGFCLFNDLAIAATHMLDHDHIDKVMIIDSDVHHGD 167
Query: 205 GHEKDFSSDSRVYILDMFNPGIYP-RDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVA 263
G + + L +P R E+ D V + T+ +L E +E+A
Sbjct: 168 GTATLCEDEPDIITLSFHCDKNFPARKPES----DLDVPLSRDTSDETFLMTFKEVVEMA 223
Query: 264 GHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ P++VIY+AG DI D LG V
Sbjct: 224 INLHRPDMVIYDAGVDIHTDDELGYFDV 251
>gi|359789845|ref|ZP_09292775.1| hypothetical protein MAXJ12_10690 [Mesorhizobium alhagi CCNWXJ12-2]
gi|359254255|gb|EHK57283.1| hypothetical protein MAXJ12_10690 [Mesorhizobium alhagi CCNWXJ12-2]
Length = 281
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 109/242 (45%), Gaps = 27/242 (11%)
Query: 59 SKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVA 118
K+ + + L + G + + +P A L + H +Y+ + I VPP
Sbjct: 2 GKYSALMEQLDARGLATPSNLHKPTPAEPGWLKLAHDATYIDQV-------IACAVPPK- 53
Query: 119 LFPNCLVQRKVLYPFRKQV--------GGTILAAKLAKERGWAINVGGGFHHCSADEGGG 170
++R++ +P ++V GGTILAA+LA G A N GG HH D G G
Sbjct: 54 ------IEREIGFPIGERVSRRAQLAAGGTILAARLALANGIACNTAGGSHHARRDHGAG 107
Query: 171 FCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRD 230
FC + D+++ + + V+I+DLD HQG+G ++ R + M R+
Sbjct: 108 FCTFNDVAVAALVLIAEGLAANVLIVDLDVHQGDGTADILKNEPRAFTFSMHG----ERN 163
Query: 231 YEARRFI-DQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGML 289
Y R+ D V + GT + YL +L + L ++V YNAG D D LG L
Sbjct: 164 YPVRKIASDLDVALPDGTGDDAYLGRLTDILTDISGRAAWDIVFYNAGVDPHADDRLGRL 223
Query: 290 KV 291
+
Sbjct: 224 AL 225
>gi|260060958|ref|YP_003194038.1| Histone deacetylase superfamily protein [Robiginitalea biformata
HTCC2501]
gi|88785090|gb|EAR16259.1| Histone deacetylase superfamily protein [Robiginitalea biformata
HTCC2501]
Length = 300
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 100/246 (40%), Gaps = 25/246 (10%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ + Q L EG + P ++L H +Y + LQ+
Sbjct: 18 HRFPMQKYELLPQQLLHEGTAEHENFFTPGLPEDSEILRAHDAAYFEDLQTG-------R 70
Query: 114 VPPVALFPNCLVQRKVLYPF--------RKQVGGTILAAKLAKERGWAINVGGGFHHCSA 165
+PP + RKV +P+ R GTI A E G ++N+ GG HH
Sbjct: 71 IPPREM-------RKVGFPWSEALVLRERTIAQGTIRCCHYALENGVSMNIAGGTHHAYR 123
Query: 166 DEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
D G FC D ++ + R++++DLD HQGNG F + RV+ M
Sbjct: 124 DRGEAFCMLNDQAIGACHLLANNLAERILMLDLDVHQGNGTAAIFREEPRVFTYSMHGQS 183
Query: 226 IYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDP 285
YP E D V + T EYL L+ LE P+ V Y G D+L D
Sbjct: 184 NYPFRKEVS---DWDVPLAKQTGDTEYLTTLETHLENLYAQVRPDFVFYLCGVDVLATDK 240
Query: 286 LGMLKV 291
LG L +
Sbjct: 241 LGTLAL 246
>gi|417950544|ref|ZP_12593664.1| histone deacetylase/AcuC/AphA family protein [Vibrio splendidus
ATCC 33789]
gi|342806327|gb|EGU41555.1| histone deacetylase/AcuC/AphA family protein [Vibrio splendidus
ATCC 33789]
Length = 306
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 125/275 (45%), Gaps = 42/275 (15%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSS--EGFLDKNC-------IVEPLEA 85
+PLIY P Y S L + + H + +K+ Q L S E +D + + +P
Sbjct: 2 IPLIYHPIY--SQLPLPEGHRYPINKY----QLLHSAVEALMDSDPLWKSKFEVFQPKPV 55
Query: 86 SKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV-------- 137
S E + VH Y+ L S +P + R++ +P+ +Q+
Sbjct: 56 SVEQVKQVHDSDYVDLLVSG-------SLPAAKM-------RRIGFPWSEQLIERTLYSS 101
Query: 138 GGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIID 197
GGT LAA +A E G AI++ GG+HH D G GFC D+ L +A + +V+I+D
Sbjct: 102 GGTCLAADMAIESGLAIHLSGGYHHAHHDFGSGFCLLNDLVLAAKHALTFEQVDKVLIVD 161
Query: 198 LDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARR-FIDQKVEVVSGTTTNEYLKKL 256
D H G+G + L +P AR+ D V + T E+L+
Sbjct: 162 SDVHHGDGTATLCQESDEIITLSFHCDKNFP----ARKPLSDLDVPLNRETEDEEFLRCF 217
Query: 257 DEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
++ ++A P+L+IY+AG DI + D LG L V
Sbjct: 218 EQVTKLAIAHHQPDLIIYDAGVDIHQDDELGYLNV 252
>gi|119471110|ref|ZP_01613642.1| histone deacetylase family protein [Alteromonadales bacterium TW-7]
gi|119445766|gb|EAW27048.1| histone deacetylase family protein [Alteromonadales bacterium TW-7]
Length = 299
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 122/259 (47%), Gaps = 14/259 (5%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+ L Y P Y S L + + H F K+ R+ + FL +P +A L + H
Sbjct: 1 MQLYYHPLY--SNLPLPEKHRFPIQKYQRLKTEIEHLSFL-PTAFKQPAKARPSQLALCH 57
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAI 154
SE Y+ + + N+S + LV+R +L VGG+I AA+ A + G
Sbjct: 58 SEHYINNFLTG-NLSDKAIKKMGFPYSAQLVERTLL-----SVGGSIQAAEEALKSGLTC 111
Query: 155 NVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDS 214
N+ GG+HH +D G GFC + D+++ + V+I D D HQG+G + + S
Sbjct: 112 NLSGGYHHAYSDYGSGFCIFNDLAIAATHLLSTHKAKTVLIFDCDVHQGDGTAQIINQQS 171
Query: 215 RVYIL--DMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELV 272
I+ + +PR ++ D +++ + +EY+ L AL + P+++
Sbjct: 172 HKNIITCSIHCEQNFPR---LKQQSDYDFSLLAKSGDDEYIDTLQHALALCVSIHQPDII 228
Query: 273 IYNAGTDILEGDPLGMLKV 291
+YNAG DI D LG+L V
Sbjct: 229 LYNAGADIYTKDELGLLNV 247
>gi|359780001|ref|ZP_09283228.1| histone deacetylase superfamily protein [Pseudomonas
psychrotolerans L19]
gi|359372617|gb|EHK73181.1| histone deacetylase superfamily protein [Pseudomonas
psychrotolerans L19]
Length = 308
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 121/262 (46%), Gaps = 20/262 (7%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
+LPL+Y DY F H F K+ + + LS+ G L + P E L +
Sbjct: 4 RLPLVYHEDYSPPF---PAGHRFPMEKFRLLHEHLSASGILGADNWQRPELCPDELLALA 60
Query: 94 HSESYLKSLQSS---PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKER 150
H+ Y+++ ++ P + + +P + LV+R + + VGG++L +LA
Sbjct: 61 HAPDYIQAFKAGELPPPLQRQLGLP----WSEALVRRTI-----RAVGGSLLTLELALRH 111
Query: 151 GWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDF 210
G A ++ GG HH D GFC + D+++ RV+I+D D HQG+G +
Sbjct: 112 GLACHLAGGTHHAHHDYPAGFCIFNDLAILALSLLESGRAGRVLILDCDVHQGDGTARIL 171
Query: 211 SSDSRVYILDMFNPGIYPRDYEARRF-IDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDP 269
+ + + YP AR+ D + + G YL+ LD+AL P
Sbjct: 172 AEVPDAVTVSLHCATNYP----ARKAQSDWDIPLPRGLDDAGYLRVLDDALGYLLPLHQP 227
Query: 270 ELVIYNAGTDILEGDPLGMLKV 291
++V+Y+AG D+ D LG L++
Sbjct: 228 DVVLYDAGVDVHRDDALGYLEL 249
>gi|431798624|ref|YP_007225528.1| deacetylase [Echinicola vietnamensis DSM 17526]
gi|430789389|gb|AGA79518.1| deacetylase, histone deacetylase/acetoin utilization protein
[Echinicola vietnamensis DSM 17526]
Length = 300
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 110/240 (45%), Gaps = 13/240 (5%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ + + L EG + + + EP S+E ++ H YL+ L +S+
Sbjct: 18 HRFPMEKYELLPEQLLYEGTIAAHNLFEPNALSEEWIVGPHKAGYLQKLTE---LSLTKS 74
Query: 114 VPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGF 171
FP LV+R++ + G++ A + G A+N+ GG HH +D G GF
Sbjct: 75 EIRKTGFPLSAALVEREI-----HIMDGSVQGCLFALKHGIAMNIAGGTHHAFSDRGEGF 129
Query: 172 CAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDY 231
C DI++ +Y + +V+++DLD HQGNG + F + V+ M YP
Sbjct: 130 CLLNDIAISANYLVQKKLAKQVLVVDLDVHQGNGTAEIFKDNPAVFTFSMHGAANYPLHK 189
Query: 232 EARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
E D V + Y++KL E L +P+ +IY G D+L D LG L V
Sbjct: 190 ETS---DLDVPLPDKVGDEFYIRKLKEHLPPLLDQVEPDFIIYQCGVDVLSTDKLGRLGV 246
>gi|386014013|ref|YP_005932290.1| Histone deacetylase superfamily [Pseudomonas putida BIRD-1]
gi|313500719|gb|ADR62085.1| Histone deacetylase superfamily [Pseudomonas putida BIRD-1]
Length = 304
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 116/261 (44%), Gaps = 20/261 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G ++ P + L + H
Sbjct: 3 LPLIYHEDYSPEF---PAEHRFPMDKFRLLHDHLVGSGLTTDQALLRPDICPNDILALAH 59
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
SY+ + S + +P + L +R V + VGG++L A++A + G
Sbjct: 60 DRSYIARYMNGELSREDQRRLGLP----WSEALARRTV-----RAVGGSLLTAEMALQHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A ++ GG HH D GFC + D+++ Y + RV+I D D HQG+G +
Sbjct: 111 IACHLAGGTHHAHYDHPAGFCIFNDLAVISRYLLEAGRVHRVLIFDCDVHQGDGTARILH 170
Query: 212 SDSRVYILDMFNPGIYPRDYEARRF-IDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPE 270
+ + +P AR+ D + + G YLK +D+AL + P+
Sbjct: 171 DTPEAITVSLHCEQNFP----ARKAQSDWDIPLPRGMGDTAYLKVVDDALNYLLPLYQPD 226
Query: 271 LVIYNAGTDILEGDPLGMLKV 291
LV+Y+AG D+ + D LG L++
Sbjct: 227 LVLYDAGVDVHKDDALGYLQL 247
>gi|424033537|ref|ZP_17772951.1| histone deacetylase domain protein [Vibrio cholerae HENC-01]
gi|408874401|gb|EKM13572.1| histone deacetylase domain protein [Vibrio cholerae HENC-01]
Length = 307
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 129/269 (47%), Gaps = 31/269 (11%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQF----LSSEGFLDKNCIVEPLEASKEDL 90
LPLIY P Y S L + + H + K+ + Q L + + +P + +++
Sbjct: 2 LPLIYHPIY--SQLELPEGHRYPIMKYQYLYQAVKDKLVQQDWGQHIEFSQPQPLNVDEI 59
Query: 91 LVVHSESYLKSLQSSPNVSIIIEVPPVAL----FP--NCLVQRKVLYPFRKQVGGTILAA 144
+VHSE Y+ L S ++P + FP LV R ++ GT+L A
Sbjct: 60 KLVHSEEYVDLLVSG-------DMPAAKMRRIGFPWSETLVSRTLM-----STAGTVLTA 107
Query: 145 KLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
+ A E G AI++ GG+HH D G GFC + D+ + Y ++ +V+IID D H G+
Sbjct: 108 EKALEHGVAIHLSGGYHHAHKDFGSGFCLFNDLVIAAKYMLETEHVDKVLIIDSDVHHGD 167
Query: 205 GHEKDFSSDSRVYILDMFNPGIY-PRDYEARR-FIDQKVEVVSGTTTNEYLKKLDEALEV 262
G +D LD+ + +++ AR+ D V + GT+ + +L E +E+
Sbjct: 168 G-TATLCADE----LDIITLSFHCDKNFPARKPDSDLDVPLSRGTSDDTFLMTFKEVVEM 222
Query: 263 AGHTFDPELVIYNAGTDILEGDPLGMLKV 291
A + P++VIY+AG DI D LG V
Sbjct: 223 ALNLHRPDMVIYDAGVDIHTDDELGYFDV 251
>gi|330814278|ref|YP_004358517.1| histone deacetylase [Candidatus Pelagibacter sp. IMCC9063]
gi|327487373|gb|AEA81778.1| histone deacetylase family protein [Candidatus Pelagibacter sp.
IMCC9063]
Length = 260
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 101/203 (49%), Gaps = 10/203 (4%)
Query: 89 DLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAK 148
DL H Y++ + N+S+ E FP ++ Y GGT+L+AKLA
Sbjct: 11 DLAKAHQPEYIQKID---NLSLSKEEERKLGFPMVPSVKRRSY---MATGGTVLSAKLAL 64
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEK 208
A N GG HH +D G G+C + D+++ + + ++ +++I DLD HQG+G K
Sbjct: 65 SYKLACNTAGGSHHAFSDSGNGYCVFNDVAVAAYNLLNKHSVKKILIYDLDVHQGDGTAK 124
Query: 209 DFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFD 268
F ++ +VY + YP ++ +Q +E+ T EYL + ++LE+ +
Sbjct: 125 IFENNDQVYTFSAHSKKNYPL---VKQQSNQDLELADDITDEEYLNTVSKSLELVN-KMN 180
Query: 269 PELVIYNAGTDILEGDPLGMLKV 291
+ V Y AG DI + D LG L +
Sbjct: 181 FDFVFYVAGVDIHKDDKLGKLNI 203
>gi|308048872|ref|YP_003912438.1| histone deacetylase [Ferrimonas balearica DSM 9799]
gi|307631062|gb|ADN75364.1| Histone deacetylase [Ferrimonas balearica DSM 9799]
Length = 303
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 118/263 (44%), Gaps = 29/263 (11%)
Query: 38 IYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSES 97
+Y P Y S L + H F K+ + L ++G L + +P+ S + + VH
Sbjct: 5 VYHPIY--SALPLPANHRFPIHKYRLLHDALLAQGVLQPERLHQPVPLSLDQVTQVHCPD 62
Query: 98 YLKSL-QSSPNVSIIIEVPPVALFPNCLVQRKVLYPFR--------KQVGGTILAAKLAK 148
Y++ Q + + QR++ +P+ GGT+ AA+LA
Sbjct: 63 YVQRFAQGTLDRK---------------AQRRLGFPWSPPLVARTLTACGGTLRAAELAL 107
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEK 208
E G A ++ GG+HH D G GFC + D+ L + +SRV+I D D HQG+G
Sbjct: 108 EHGIACHLSGGYHHAHRDFGSGFCVFNDLVLAARLLLQRQAVSRVLIFDCDVHQGDGSAA 167
Query: 209 DFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFD 268
D + + +P +AR +D +E + YL LD L + +
Sbjct: 168 LCQDDPDIITCSLHCERNFPA-RKARSHVDVPLE--NDLDDAAYLATLDTVLPWLLNLYQ 224
Query: 269 PELVIYNAGTDILEGDPLGMLKV 291
P+LVIY+AG D+ + D LG L +
Sbjct: 225 PDLVIYDAGVDVHQDDALGYLSL 247
>gi|120437426|ref|YP_863112.1| histone deacetylase [Gramella forsetii KT0803]
gi|117579576|emb|CAL68045.1| histone deacetylase family protein [Gramella forsetii KT0803]
Length = 300
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 110/238 (46%), Gaps = 13/238 (5%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ + + L EG + +P + +L VH Y+K L+ N+ + +
Sbjct: 18 HRFPMEKYDLLPKQLLHEGTCNDENFFKPEFPEESHILNVHDPEYVKRLK---NLDLSKK 74
Query: 114 VPPVALFPNCLVQRKVLYPFRKQV--GGTILAAKLAKERGWAINVGGGFHHCSADEGGGF 171
V+ FP L Q V R+Q+ GTI A A + G A+N+ GG HH + F
Sbjct: 75 EIRVSGFP--LSQELV---NREQIIANGTIKACDYALKNGIAMNIAGGTHHAFTNRAEAF 129
Query: 172 CAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDY 231
C D ++ Y + ++++IDLD HQGNG + F +D+ V+ M G YP
Sbjct: 130 CLLNDQAIGARYLQEKGLAKKILMIDLDVHQGNGTAEIFKNDASVFTFSMHGKGNYPFRK 189
Query: 232 EARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGML 289
E D +E GT +YL+KL L P+ + Y G DIL+ D LG L
Sbjct: 190 EKS---DLDIEFDDGTQDAKYLEKLKSILPKLIEKTRPDFIFYLCGVDILKTDKLGRL 244
>gi|296283064|ref|ZP_06861062.1| hypothetical protein CbatJ_05560 [Citromicrobium bathyomarinum
JL354]
Length = 294
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 88/174 (50%), Gaps = 11/174 (6%)
Query: 126 QRKVLYPFRKQV--------GGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADI 177
+R++ +P + GGT LAA+LA G+A N G HH D G GFC + D+
Sbjct: 64 ERRIGFPVTPHIAQRVAHTNGGTWLAARLAMRHGYAANSAAGSHHALYDTGAGFCVFNDL 123
Query: 178 SLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFI 237
++C + Q + RV+I+D D HQG+G + V+ L + +P +AR +
Sbjct: 124 AVCANRLIAQGDARRVLIVDCDVHQGDGTAALTAGREDVFTLSLHAEKNFPV-RKARSSL 182
Query: 238 DQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
D V + GT+ +YL LD L F P++V+Y AG D E D LG L +
Sbjct: 183 D--VALPDGTSDADYLDVLDTHLPHVLDEFAPDIVLYQAGVDPHENDKLGRLAL 234
>gi|427706042|ref|YP_007048419.1| histone deacetylase [Nostoc sp. PCC 7107]
gi|427358547|gb|AFY41269.1| Histone deacetylase [Nostoc sp. PCC 7107]
Length = 305
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 120/264 (45%), Gaps = 22/264 (8%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LP+IY P+Y + + H F SK+ ++ + L ++G P ++ + +
Sbjct: 1 MHLPIIYHPNY---VAPLPEGHRFPMSKFSKLYELLLNDGVAQAEQFHTPQVPPQDLIEL 57
Query: 93 VHSESYLK-----SLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLA 147
VH+ Y++ +L + I + PV + C+ VGGTIL A++A
Sbjct: 58 VHTPDYVRAYCKGTLDAKAQRRIGLPWSPVLVNRTCVA-----------VGGTILTAQMA 106
Query: 148 KERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHE 207
+G A N GG HH G GFC + D+++ + +++I+DLD HQG+G
Sbjct: 107 LSQGLACNTAGGTHHAFPSYGSGFCIFNDLAIASRVLQKLGLVQKILIVDLDVHQGDGTA 166
Query: 208 KDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTF 267
F+ D+ V+ M +P ++ D V + G + YL+ L + L
Sbjct: 167 FIFADDASVFTFSMHCEVNFP---GTKQHSDLDVPLPVGMDDDAYLQTLAKYLPDLLSHV 223
Query: 268 DPELVIYNAGTDILEGDPLGMLKV 291
P+L+ Y+AG D D LG L +
Sbjct: 224 QPDLIFYDAGVDPHICDRLGKLAL 247
>gi|386827004|ref|ZP_10114111.1| deacetylase, histone deacetylase/acetoin utilization protein
[Beggiatoa alba B18LD]
gi|386427888|gb|EIJ41716.1| deacetylase, histone deacetylase/acetoin utilization protein
[Beggiatoa alba B18LD]
Length = 307
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 121/276 (43%), Gaps = 28/276 (10%)
Query: 19 NRILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNC 78
N + S+ F IF +PL H F K+ + Q L +
Sbjct: 5 NSLFSAMDIFYTDIFPIPL-------------PATHRFPMEKYALLRQQLVDNSIISPAY 51
Query: 79 IVEPLEASKEDLLVVHSESYLKSL---QSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRK 135
+ P A+ E L+ H+ Y++ + + + II P + +V+R R+
Sbjct: 52 LQIPPAATLEQLIYAHTPDYIQRVFAGELTEQEIKIIGFP----WSTAMVERS-----RR 102
Query: 136 QVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMI 195
G TI A A ++G A+++ GG HH AD G G+C + D ++ + + +V+I
Sbjct: 103 SCGATIQACYSALKQGIAVSLAGGTHHAYADHGQGYCVFNDSAVSARLLKITGWVKQVVI 162
Query: 196 IDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKK 255
ID D HQGNG + D+ ++ + +P E +E+ T + YLK
Sbjct: 163 IDCDVHQGNGTAHILADDNDLFTFSIHGAKNFPFRKEKSNL---DIELSDNTGDDVYLKA 219
Query: 256 LDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
L++ L+ +P+LVIY AG D + D LG L +
Sbjct: 220 LEQRLKAVFQQINPDLVIYLAGADPYQNDRLGRLAL 255
>gi|262170966|ref|ZP_06038644.1| histone deacetylase/AcuC/AphA family protein [Vibrio mimicus
MB-451]
gi|261892042|gb|EEY38028.1| histone deacetylase/AcuC/AphA family protein [Vibrio mimicus
MB-451]
Length = 306
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 118/266 (44%), Gaps = 24/266 (9%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKW---GRICQFLSSEGFLDKNCIVEPLEASKEDLL 91
+PLIY P Y L + +P + + + Q SE + D P A +
Sbjct: 2 IPLIYHPIYSQLDLPVGHRYPINKYRLLYEDIVRQQAQSEEWRDAFGFFTPQIAELSLVE 61
Query: 92 VVHSESYLKSLQSSPNVSIIIEVPPVAL----FP--NCLVQRKVLYPFRKQVGGTILAAK 145
+H Y+++L +P + FP L++R +L VGGT L +
Sbjct: 62 SLHDSEYVQALLDGT-------LPAAKMRRIGFPWSEKLIERTLL-----SVGGTCLTVE 109
Query: 146 LAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A G AI++ GG+HH AD G GFC + D+++ H+A + +V+IID D H G+G
Sbjct: 110 RALLSGVAIHLSGGYHHAHADFGSGFCLFNDLAIAAHFALSLSGVDKVLIIDSDVHHGDG 169
Query: 206 HEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGH 265
+ + L +P A D +E T E+L + +E+A +
Sbjct: 170 TATLCAERDEIITLSFHCDKNFPARKPAS---DMDIEFTKQTGDEEFLSTFTQVVEMAVN 226
Query: 266 TFDPELVIYNAGTDILEGDPLGMLKV 291
P+L++Y+AG DI D LG L +
Sbjct: 227 LHQPDLILYDAGVDIHSDDELGYLSI 252
>gi|254559298|ref|YP_003066393.1| histone deacetylase [Methylobacterium extorquens DM4]
gi|254266576|emb|CAX22340.1| Histone deacetylase family protein [Methylobacterium extorquens
DM4]
Length = 297
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 119/263 (45%), Gaps = 29/263 (11%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+P+++ P Y+ + + H F K+GR+ + L + G + + V P A L H
Sbjct: 2 IPIVFHPAYEAE---LPEGHRFPMRKYGRLAEILRARGLV-PDGFVTPEPADAALLSGAH 57
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTILAAKL 146
+Y+ ++ ++ +VP V ++R + P + V GGT+ AA+L
Sbjct: 58 DPAYVAAVLAA-------QVPRV-------IERAIGLPVTEAVAARACASAGGTLRAARL 103
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
A G A + GG HH G GFC + D+++ + I+R +I+DLD HQG+G
Sbjct: 104 ALSHGLAGSTAGGSHHARRAGGAGFCVFNDVAVAALALRREGAITRALIVDLDVHQGDGT 163
Query: 207 EKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHT 266
+ + ++ L + YP D + D + + G EY L+ L
Sbjct: 164 ADCLAREPDLFTLSIHCERNYPHD---KVPGDLDIGLPDGLDDAEYCAVLEARLPALVQN 220
Query: 267 FDPELVIYNAGTDILEGDPLGML 289
F P+L+ YNAG D D LG L
Sbjct: 221 FAPDLIFYNAGVDPHRDDRLGRL 243
>gi|383768053|ref|YP_005447036.1| putative deacetylase [Phycisphaera mikurensis NBRC 102666]
gi|381388323|dbj|BAM05139.1| putative deacetylase [Phycisphaera mikurensis NBRC 102666]
Length = 315
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 113/249 (45%), Gaps = 23/249 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSP---NVSI 110
H F K+G + L++ G L + P A+ E L H +Y + S +
Sbjct: 8 HRFPMPKFGHLHDHLAAVGLLGPGNLHRPEPAAVETLGRAHDPAYADAFLSGRLDRDALR 67
Query: 111 IIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGG 170
+ +P + L R V +GGT+LAA+LA G A N+ GG HH G G
Sbjct: 68 TLGLP----WSAGLAARTV-----TALGGTVLAARLALRHGLAANLAGGTHHAHRGHGAG 118
Query: 171 FCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRD 230
FC + D+++ + + +V+I+DLD HQG+G + + R + L + YP
Sbjct: 119 FCIFNDLAVAALTLLEEDAVDQVLIVDLDVHQGDGTARILRHEPRAFTLSVHCASNYPA- 177
Query: 231 YEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAG--------HTFDPELVIYNAGTDILE 282
+AR +D V + G YL+ L E +G +P+LV+Y+AG D+
Sbjct: 178 RKARSDLD--VPLPDGLGDAGYLRVLGHGDEASGFRGLGWLLEQVEPDLVLYDAGVDVHA 235
Query: 283 GDPLGMLKV 291
D LG L +
Sbjct: 236 DDKLGRLAM 244
>gi|255531938|ref|YP_003092310.1| histone deacetylase [Pedobacter heparinus DSM 2366]
gi|255344922|gb|ACU04248.1| Histone deacetylase [Pedobacter heparinus DSM 2366]
Length = 299
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 111/246 (45%), Gaps = 26/246 (10%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ I L EG + + EP +E +L H ++Y + L+S +
Sbjct: 18 HRFPMIKYELIPGQLLHEGLISAANLFEPGLLEEEVVLYAHQKAYWEQLKS-------LS 70
Query: 114 VPPVALFPNCLVQRKVLYPFRKQV--------GGTILAAKLAKERGWAINVGGGFHHCSA 165
+P QR++ +P Q+ GT+ + A + G A NV GG HH +
Sbjct: 71 LPARE-------QRRIGFPLTAQLLEREIRIAKGTVDGSGYALQYGIAFNVAGGTHHAGS 123
Query: 166 DEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
+ G GFC D ++ +Y ++IIDLD HQGNG + F ++ RV+ M
Sbjct: 124 NWGEGFCLLNDQAIAANYLLNNGLAKHILIIDLDVHQGNGTAEIFENEPRVFTFSMHGDK 183
Query: 226 IYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDP 285
+P E D + + GT E+L KL E+L + P+ V Y +G D+L D
Sbjct: 184 NFPFRKEKS---DLDIALGDGTGDAEFLSKLKESLPLL-LAHRPDFVFYLSGVDVLASDK 239
Query: 286 LGMLKV 291
LG L +
Sbjct: 240 LGKLAL 245
>gi|258625470|ref|ZP_05720363.1| histone deacetylase/AcuC/AphA family protein [Vibrio mimicus VM603]
gi|258582274|gb|EEW07130.1| histone deacetylase/AcuC/AphA family protein [Vibrio mimicus VM603]
Length = 306
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 118/266 (44%), Gaps = 24/266 (9%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKW---GRICQFLSSEGFLDKNCIVEPLEASKEDLL 91
+PLIY P Y L + +P + + + Q SE + D P A +
Sbjct: 2 IPLIYHPIYSQLDLPVGHRYPINKYRLLYEDIVRQQAQSEEWRDVFGFFTPQIAELSLVK 61
Query: 92 VVHSESYLKSLQSSPNVSIIIEVPPVAL----FP--NCLVQRKVLYPFRKQVGGTILAAK 145
+H Y+++L +P + FP L++R +L VGGT L +
Sbjct: 62 SLHDSEYVQALLDGA-------LPAAKMRRIGFPWSEKLIERTLL-----SVGGTCLTVE 109
Query: 146 LAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A G AI++ GG+HH AD G GFC + D+++ H+A + +V+IID D H G+G
Sbjct: 110 RALLSGVAIHLSGGYHHAHADFGSGFCLFNDLAIAAHFALSLSGVDKVLIIDSDVHHGDG 169
Query: 206 HEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGH 265
+ + L +P A D +E T E+L + +E+A +
Sbjct: 170 TATLCAERDEIITLSFHCDKNFPARKPAS---DMDIEFTKQTGDEEFLSTFTQVVEMAVN 226
Query: 266 TFDPELVIYNAGTDILEGDPLGMLKV 291
P+L++Y+AG DI D LG L +
Sbjct: 227 LHQPDLILYDAGVDIHSDDELGYLSI 252
>gi|429751872|ref|ZP_19284765.1| histone deacetylase family protein [Capnocytophaga sp. oral taxon
326 str. F0382]
gi|429178776|gb|EKY20044.1| histone deacetylase family protein [Capnocytophaga sp. oral taxon
326 str. F0382]
Length = 307
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 108/244 (44%), Gaps = 20/244 (8%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIII- 112
H F K+ + Q L EG P +A++ +VH++ YL + + + +
Sbjct: 24 HRFPMEKYALLPQQLLYEGIASATNFHTPEKATQATAALVHTQPYLHNF-----LHLTLS 78
Query: 113 --EVPPVALFPNC--LVQRKVLYPFRKQVGGTILAAKLAKERG-WAINVGGGFHHCSADE 167
E P+ F C LV R++ V GT+ A A G A N+ GG HH ++
Sbjct: 79 HKEALPIG-FVQCQQLVDRELTL-----VQGTVEGALWALRTGEIAFNIAGGTHHAFSNR 132
Query: 168 GGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIY 227
G GFC D ++ Y + +V+I+DLD HQGNG + F + V+ M Y
Sbjct: 133 GEGFCMLNDQAIAAAYLLHHTAVKKVLIVDLDVHQGNGTAEIFRNTPEVFTFSMHAQANY 192
Query: 228 PRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLG 287
P + E D+ + + +GT YL L L P+ V Y AG D+L D LG
Sbjct: 193 PFEKEQS---DKDIALPNGTDDKTYLDILRSVLPQLIEAHQPDFVFYQAGVDVLATDKLG 249
Query: 288 MLKV 291
L +
Sbjct: 250 KLSL 253
>gi|402698355|ref|ZP_10846334.1| histone deacetylase [Pseudomonas fragi A22]
Length = 306
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 119/261 (45%), Gaps = 20/261 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G ++ P + L + H
Sbjct: 3 LPLIYHDDYSPEF---PAEHRFPMDKFRLLRDHLVQSGLTRDADLLRPELCPVDILALAH 59
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
+Y++ + + + +P + L +R + + VGG++LAA+ A E G
Sbjct: 60 DRAYIERYMAGELAREDQRRLGLP----WSEALARRTI-----RAVGGSLLAAEQALEHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A ++ GG HH D GFC + D+++ Y ++RV+I D D HQG+G +
Sbjct: 111 LACHLAGGTHHAHYDHPAGFCIFNDLAVISRYLLESGRVNRVLIFDCDVHQGDGTARILE 170
Query: 212 SDSRVYILDMFNPGIYPRDYEARRF-IDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPE 270
+ + +P AR+ D + + G EYL+ +D+AL + P+
Sbjct: 171 HTPDAITVSLHCEKNFP----ARKAQSDWDIGLPMGMGDTEYLQVVDDALNYLLALYQPD 226
Query: 271 LVIYNAGTDILEGDPLGMLKV 291
LV+Y+AG D+ + D LG LK+
Sbjct: 227 LVLYDAGVDVHKDDALGYLKL 247
>gi|213963775|ref|ZP_03392024.1| histone deacetylase family protein [Capnocytophaga sputigena Capno]
gi|213953551|gb|EEB64884.1| histone deacetylase family protein [Capnocytophaga sputigena Capno]
Length = 300
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 109/244 (44%), Gaps = 20/244 (8%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIII- 112
H F K+ + Q L EG + P +A++ +VH++ YL + + + +
Sbjct: 17 HRFPMEKYALLPQQLLYEGIASASNFHTPEKATQATAALVHTQPYLHNF-----LHLTLS 71
Query: 113 --EVPPVALFPNC--LVQRKVLYPFRKQVGGTILAAKLAKERGW-AINVGGGFHHCSADE 167
E P+ F C LV R++ V GT+ A A G A N+ GG HH ++
Sbjct: 72 HKEALPIG-FVQCQQLVDRELTL-----VQGTVEGALWALRTGEVAFNIAGGTHHAFSNR 125
Query: 168 GGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIY 227
G GFC D ++ Y + +V+I+DLD HQGNG + F + V+ M Y
Sbjct: 126 GEGFCMLNDQAIAAAYLLHHTAVKKVLIVDLDVHQGNGTAEIFRNTPEVFTFSMHAQANY 185
Query: 228 PRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLG 287
P + E D+ + + +GT YL L L P+ V Y AG D+L D LG
Sbjct: 186 PFEKEQS---DKDIALPNGTDDKTYLDILRSTLPQLIEAHQPDFVFYQAGVDVLATDKLG 242
Query: 288 MLKV 291
L +
Sbjct: 243 KLSL 246
>gi|156975305|ref|YP_001446212.1| hypothetical protein VIBHAR_03035 [Vibrio harveyi ATCC BAA-1116]
gi|156526899|gb|ABU71985.1| hypothetical protein VIBHAR_03035 [Vibrio harveyi ATCC BAA-1116]
Length = 307
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 125/268 (46%), Gaps = 29/268 (10%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQF----LSSEGFLDKNCIVEPLEASKEDL 90
LPLIY P Y S L + + H + K+ + Q L++E + ++ +P S +++
Sbjct: 2 LPLIYHPIY--SQLDLPEGHRYPIMKYHHLHQAVLEKLANESWGEQVEFFQPTSLSVDEV 59
Query: 91 LVVHSESYLKSLQSSPNVSIIIEVPPVAL----FP--NCLVQRKVLYPFRKQVGGTILAA 144
VHSE Y+ L + +P + FP L+ R + GT+L A
Sbjct: 60 KRVHSEEYVDLLVAGA-------MPAAKMRRIGFPWSEALITRTL-----TSTAGTVLTA 107
Query: 145 KLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
+ A E G AI++ GG+HH D G GFC + D+++ + ++ +VMIID D H G+
Sbjct: 108 EKALEHGIAIHLSGGYHHAHKDFGSGFCLFNDLAIAAKHMLDHEHVDKVMIIDSDVHHGD 167
Query: 205 GHEKDFSSDSRVYILDMFNPGIYPRDYEARR-FIDQKVEVVSGTTTNEYLKKLDEALEVA 263
G ++ + L +P AR+ D V + T +L E +++A
Sbjct: 168 GTATLCKDEADIITLSFHCDKNFP----ARKPDSDLDVPLRRDTDDETFLMTFKEVVQMA 223
Query: 264 GHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ P++VIY+AG DI D LG V
Sbjct: 224 INLHRPDMVIYDAGVDIHTDDELGYFNV 251
>gi|339489485|ref|YP_004704013.1| histone deacetylase superfamily protein [Pseudomonas putida S16]
gi|338840328|gb|AEJ15133.1| histone deacetylase superfamily protein [Pseudomonas putida S16]
Length = 304
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 119/261 (45%), Gaps = 20/261 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G ++ P + L + H
Sbjct: 3 LPLIYHEDYSPEF---PAEHRFPMDKFRLLHDHLIDSGLTTDQALLRPDICPNDILALAH 59
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
SY++ + S + +P + L +R V + VGG++L+A++A ++G
Sbjct: 60 DRSYIERYMNGDLSREDQRRLGLP----WSEALARRTV-----RAVGGSLLSAEMALQQG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A ++ GG HH D GFC + D+++ Y + RV+I D D HQG+G +
Sbjct: 111 IACHLAGGTHHAHYDHPAGFCIFNDLAVISRYLLEAGRVHRVLIFDCDVHQGDGTARILH 170
Query: 212 SDSRVYILDMFNPGIYPRDYEARRF-IDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPE 270
+ + +P AR+ D + + G YLK +D+AL + P+
Sbjct: 171 DTPDAITVSLHCEQNFP----ARKAQSDWDIPLPRGMGDMAYLKVVDDALNYLLPLYRPD 226
Query: 271 LVIYNAGTDILEGDPLGMLKV 291
LV+Y+AG D+ + D LG L++
Sbjct: 227 LVLYDAGVDVHKDDALGYLQL 247
>gi|56460961|ref|YP_156242.1| histone deacetylase/AcuC/AphA family protein [Idiomarina loihiensis
L2TR]
gi|56179971|gb|AAV82693.1| Histone deacetylase/AcuC/AphA family protein [Idiomarina loihiensis
L2TR]
Length = 311
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 124/258 (48%), Gaps = 14/258 (5%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+P IYSP Y S L + H + K+ + + G + N +P S E + H
Sbjct: 6 VPFIYSPLY--SELDLPPRHRYPIEKYRLLKDWAVKHGATN-NQWHQPEPLSWEQVARTH 62
Query: 95 SESYLKSL-QSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWA 153
YL L Q+S + S + FP ++LY GGT+L +LA +G A
Sbjct: 63 CPGYLSQLRQNSMDKSSWRRIG----FP---WSEQLLYRTLTSAGGTLLTTELALTKGVA 115
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSD 213
I+ GG+HH D G GFC D+++ + V+ +++++D D HQG+G F +D
Sbjct: 116 IHFSGGYHHAHKDWGSGFCLLNDLAIACNEILVRHPKLKIVVLDTDVHQGDGTATLFEND 175
Query: 214 SRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVI 273
+RV+ + +P +A +D + + T+ EYL L+ LE P+L++
Sbjct: 176 NRVFTCSIHGERNFPFS-KASSNLD--IPLAKHTSDKEYLAALENTLERINREIKPDLIL 232
Query: 274 YNAGTDILEGDPLGMLKV 291
Y+AG DI + D LG L +
Sbjct: 233 YDAGVDIYQRDELGHLNI 250
>gi|343517076|ref|ZP_08754091.1| histone deacetylase/AcuC/AphA family protein [Vibrio sp. N418]
gi|342794575|gb|EGU30338.1| histone deacetylase/AcuC/AphA family protein [Vibrio sp. N418]
Length = 305
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 122/267 (45%), Gaps = 28/267 (10%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSE---GFLDKNCIVEPLEASKEDLL 91
+P+IY P Y S L + + H + K+ + L+ + + ++ + +P ++ +
Sbjct: 2 IPVIYHPIY--SQLSLPEGHRYPIDKYRLLYHALTDKMQGEWANRFMVFQPKPLTQATIS 59
Query: 92 VVHSESYLKSLQSSPNVSIIIEVPPVAL----FP--NCLVQRKVLYPFRKQVGGTILAAK 145
H Y+ +L + +P V + FP L++R GGT L +
Sbjct: 60 QYHCSDYIDALVNG-------RLPAVKMRRIGFPWSEALIERTF-----TSAGGTWLTTQ 107
Query: 146 LAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
LA E+G AI++ GG+HH D G GFC D+ L A I RV+I+D D H G+G
Sbjct: 108 LAIEQGIAIHLSGGYHHAHYDFGSGFCLINDLVLSAKQALTLEKIDRVLIVDSDVHHGDG 167
Query: 206 HEKDFSSDSRVYILDMFNPGIYPRDYEARR-FIDQKVEVVSGTTTNEYLKKLDEALEVAG 264
S D R+ L +P AR+ D + T NE+L+ +E
Sbjct: 168 TATMCSDDERIITLSFHCDKNFP----ARKPSSDIDIGFARETQDNEFLEHFYSVVETTI 223
Query: 265 HTFDPELVIYNAGTDILEGDPLGMLKV 291
+ + P+++IY+AG DI + D LG +
Sbjct: 224 NLYRPDVIIYDAGVDIHQDDELGYFNI 250
>gi|312883681|ref|ZP_07743405.1| histone deacetylase/AcuC/AphA family protein [Vibrio caribbenthicus
ATCC BAA-2122]
gi|309368654|gb|EFP96182.1| histone deacetylase/AcuC/AphA family protein [Vibrio caribbenthicus
ATCC BAA-2122]
Length = 307
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 121/275 (44%), Gaps = 34/275 (12%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSE-----GFLDKNCIVEPLEASKED 89
+PLIY P Y S L + + H + +K+ + + + VEP + D
Sbjct: 2 IPLIYHPIY--SQLPLPEGHRYPINKYRLLFDAIEERCNEQPSWRQNFHFVEPTPLTLND 59
Query: 90 LLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTI 141
+ VH+E+++ L S +P + R++ +P+ +Q+ GGT
Sbjct: 60 VEKVHNEAFVNQLASG-------TLPGAKM-------RRIGFPWSEQLIKRTLTSAGGTC 105
Query: 142 LAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAH 201
K A G A+++ GG+HH D G GFC + D+ L A I +V+I+D D H
Sbjct: 106 ETVKQALSHGVAVHLSGGYHHAHYDFGSGFCLFNDLVLAARSALQLEGIGKVLIVDSDVH 165
Query: 202 QGNGHEKDFSSDSRVYILDMFNPGIYP-RDYEARRFIDQKVEVVSGTTTNEYLKKLDEAL 260
G+G + D R+ L +P R E+ D V T +E+L +
Sbjct: 166 HGDGTASLCNGDERIVTLSFHCDKNFPARKPES----DLDVPFCRDTGDDEFLNSFTSIV 221
Query: 261 EVAGHTFDPELVIYNAGTDILEGDPLGMLKVKWGV 295
E+A H P+ ++Y+AG DI D LG L V G
Sbjct: 222 EMAVHMHQPDCILYDAGVDIHTDDELGYLDVSTGA 256
>gi|119584571|gb|EAW64167.1| histone deacetylase 11, isoform CRA_k [Homo sapiens]
Length = 225
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 59/81 (72%)
Query: 23 SSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEP 82
+++LY +P + P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E L + +VE
Sbjct: 4 TTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEA 63
Query: 83 LEASKEDLLVVHSESYLKSLQ 103
EAS+EDLLVVH+ YL L+
Sbjct: 64 REASEEDLLVVHTRRYLNELK 84
>gi|427718250|ref|YP_007066244.1| histone deacetylase [Calothrix sp. PCC 7507]
gi|427350686|gb|AFY33410.1| Histone deacetylase [Calothrix sp. PCC 7507]
Length = 310
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 113/262 (43%), Gaps = 22/262 (8%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LP++Y PDY + H F SK+ ++ + L +G P + + +VH
Sbjct: 9 LPIVYHPDY---IAPLPPGHRFPMSKFRQLYELLLGDGVAQIAQFHTPERPPTDLIELVH 65
Query: 95 SESYLK-----SLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
+ Y++ +L + I + P C+ VGGTIL AKLA
Sbjct: 66 TPDYVQAYCEGTLDAKAQRRIGLPWSPALANRTCVA-----------VGGTILTAKLALS 114
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKD 209
+G A N GG HH G GFC + D+++ + +++I+DLD HQG+G
Sbjct: 115 QGLACNTAGGTHHAFPSYGSGFCIFNDLAIACRVLQKIGLVHKILIVDLDVHQGDGTAFI 174
Query: 210 FSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDP 269
F D V+ M +P ++ D V + G + YL+ L L P
Sbjct: 175 FQDDESVFTFSMHCEVNFP---GTKQKSDLDVPLTVGMEDDTYLQTLANYLPDLLSEIKP 231
Query: 270 ELVIYNAGTDILEGDPLGMLKV 291
+L+ Y+AG D GD LG L +
Sbjct: 232 DLIFYDAGVDPHIGDRLGKLAL 253
>gi|163850153|ref|YP_001638196.1| histone deacetylase superfamily protein [Methylobacterium
extorquens PA1]
gi|163661758|gb|ABY29125.1| histone deacetylase superfamily [Methylobacterium extorquens PA1]
Length = 308
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 118/263 (44%), Gaps = 29/263 (11%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+P+++ P Y+ + + H F K+GR+ + L + G + + V P A L H
Sbjct: 13 IPIVFHPAYEAE---LPEGHRFPMRKYGRLAELLRARGLV-PDGFVTPEPADAALLSGAH 68
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTILAAKL 146
Y+ ++ ++ +VP V ++R + P + V GGT+ AA+L
Sbjct: 69 DPVYVAAVLAA-------QVPRV-------IERAIGLPVTEAVAARACASAGGTLRAARL 114
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
A G A + GG HH G GFC + D+++ + I+R +I+DLD HQG+G
Sbjct: 115 ALSHGLAGSTAGGSHHARRAGGAGFCVFNDVAVAALALRREGAITRALIVDLDVHQGDGT 174
Query: 207 EKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHT 266
+ + ++ L + YP D + D + + G EY L+ L
Sbjct: 175 ADCLAREPDLFTLSIHCERNYPHD---KVPGDLDIGLPDGLDDAEYCAVLEARLPALVQN 231
Query: 267 FDPELVIYNAGTDILEGDPLGML 289
F P+L+ YNAG D D LG L
Sbjct: 232 FAPDLIFYNAGVDPHRDDRLGRL 254
>gi|431804581|ref|YP_007231484.1| histone deacetylase superfamily protein [Pseudomonas putida HB3267]
gi|430795346|gb|AGA75541.1| histone deacetylase superfamily protein [Pseudomonas putida HB3267]
Length = 304
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 118/261 (45%), Gaps = 20/261 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G ++ P + L + H
Sbjct: 3 LPLIYHEDYSPEF---PAEHRFPMDKFRLLHDHLIDSGLTTDQALLRPDICPNDILALAH 59
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
SY++ + S + +P + L +R V + VGG++L+A++A + G
Sbjct: 60 DRSYIERYMNGDLSREDQRRLGLP----WSEALARRTV-----RAVGGSLLSAEMALQHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A ++ GG HH D GFC + D+++ Y + RV+I D D HQG+G +
Sbjct: 111 IACHLAGGTHHAHYDHPAGFCIFNDLAVISRYLLEAGRVHRVLIFDCDVHQGDGTARILH 170
Query: 212 SDSRVYILDMFNPGIYPRDYEARRF-IDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPE 270
+ + +P AR+ D + + G YLK +D+AL + P+
Sbjct: 171 DTPDAITVSLHCEQNFP----ARKAQSDWDIPLPRGMGDMAYLKVVDDALNYLLPLYRPD 226
Query: 271 LVIYNAGTDILEGDPLGMLKV 291
LV+Y+AG D+ + D LG L++
Sbjct: 227 LVLYDAGVDVHKDDALGYLQL 247
>gi|257094856|ref|YP_003168497.1| histone deacetylase superfamily [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257047380|gb|ACV36568.1| histone deacetylase superfamily [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 306
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 118/263 (44%), Gaps = 18/263 (6%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
++ L Y+ D L + H F K+ R+ + L + G P+ AS E L
Sbjct: 3 RVKLFYT---DTFVLPLPPGHRFPMEKYARLRERLRASGQFADADFRSPMAASTEQLCHA 59
Query: 94 HSESYL-KSLQSSPNVSIIIEVPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKER 150
H Y+ + + + + I + FP +V+R R+ G TI A ++A +
Sbjct: 60 HVAEYVARVCRGDLSAAEIRRIG----FPWSEGMVERS-----RRSAGATIAACRIALQE 110
Query: 151 GWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDF 210
AIN+ GG HH AD G GFC + D ++ + + R+ ++D D HQGNG
Sbjct: 111 TCAINLAGGTHHAHADHGEGFCVFNDAAVAARVLRAEGCVQRLAVVDCDVHQGNGTASIC 170
Query: 211 SSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPE 270
+ D+ V+ + +P A+ D V + GT YL++L AL+ P+
Sbjct: 171 AEDASVFTFSIHAQKNFP---FAKAISDLDVGLPDGTGDTVYLQQLAWALDQVFARARPD 227
Query: 271 LVIYNAGTDILEGDPLGMLKVKW 293
LVIY AG D D LG L + +
Sbjct: 228 LVIYLAGADPYCDDRLGRLALTF 250
>gi|449144557|ref|ZP_21775372.1| Histone deacetylase/AcuC/AphA family protein [Vibrio mimicus CAIM
602]
gi|449080058|gb|EMB50977.1| Histone deacetylase/AcuC/AphA family protein [Vibrio mimicus CAIM
602]
Length = 306
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 100/203 (49%), Gaps = 16/203 (7%)
Query: 97 SYLKSLQSSPNVSIIIE--VPPVAL----FP--NCLVQRKVLYPFRKQVGGTILAAKLAK 148
S +KSL S V ++E +P + FP L++R +L VGGT L + A
Sbjct: 58 SLVKSLHDSEYVQALLEGALPAAKMRRIGFPWSEKLIERTLL-----SVGGTCLTVERAL 112
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEK 208
+ G +I++ GG+HH AD G GFC + D+++ H+A + +V+IID D G+G
Sbjct: 113 QSGLSIHLSGGYHHAHADFGSGFCLFNDLAIAAHFALSLSGVDKVLIIDSDVDHGDGTAT 172
Query: 209 DFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFD 268
+ + L +P A D +E + T E+L + +E+A +
Sbjct: 173 LCAEREEIITLSFHCDKNFPARKPAS---DMDIEFIKQTGDEEFLSTFTQVVEMAVNLHQ 229
Query: 269 PELVIYNAGTDILEGDPLGMLKV 291
P+L++Y+AG DI D LG L +
Sbjct: 230 PDLILYDAGVDIHSDDELGYLSI 252
>gi|104779963|ref|YP_606461.1| histone deacetylase family hydrolase [Pseudomonas entomophila L48]
gi|95108950|emb|CAK13646.1| putative hydrolase; histone deacetylase family protein [Pseudomonas
entomophila L48]
Length = 304
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 115/261 (44%), Gaps = 20/261 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G ++ P + L + H
Sbjct: 3 LPLIYHDDYSPEF---PPDHRFPMDKFRLLRDHLVDSGLTTDQALLRPEICPNDILALAH 59
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
Y++ + S + +P + L +R V + VGG++L A+LA + G
Sbjct: 60 DRDYIERYMNGELSREDQRRLGLP----WSEALARRTV-----RAVGGSLLTAELALQHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A ++ GG HH D GFC + D+++ Y + RV+I D D HQG+G +
Sbjct: 111 VACHLAGGTHHAHYDHPAGFCIFNDLAVISRYLLEAGRVHRVLIFDCDVHQGDGTARILQ 170
Query: 212 SDSRVYILDMFNPGIYPRDYEARRF-IDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPE 270
+ + +P AR+ D + + G YLK +D+AL + P+
Sbjct: 171 DTPEAITVSLHCEQNFP----ARKAQSDWDIPLPRGMHDGAYLKVVDDALNYLLPLYQPD 226
Query: 271 LVIYNAGTDILEGDPLGMLKV 291
LV+Y+AG D+ + D LG L +
Sbjct: 227 LVLYDAGVDVHKDDALGYLHL 247
>gi|399522038|ref|ZP_10762703.1| histone deacetylase superfamily protein [Pseudomonas
pseudoalcaligenes CECT 5344]
gi|399110073|emb|CCH39263.1| histone deacetylase superfamily protein [Pseudomonas
pseudoalcaligenes CECT 5344]
Length = 311
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 115/258 (44%), Gaps = 14/258 (5%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPL+Y DY F H F K+ + L G + P E L +VH
Sbjct: 8 LPLVYHEDYSPPF---PAGHRFPMEKFRLLRDHLVDSGLTTDAALQRPELCPAEILALVH 64
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAI 154
Y+ + +S + + + L QR V + VGG++L A+LA G A
Sbjct: 65 CPDYIARYMAG-ELSYEDQRRLGLPWSDALAQRTV-----RAVGGSLLTAELALRHGLAC 118
Query: 155 NVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDS 214
++ GG HH D GFC + D+++ Y + RV+I D D HQG+G + +
Sbjct: 119 HLAGGTHHAHYDFPSGFCIFNDLAVIARYLLEAGRVHRVLIFDCDVHQGDGTARLLEDEP 178
Query: 215 RVYILDMFNPGIYPRDYEARRF-IDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVI 273
+ + +P AR+ D + + G +YLK +D+ L + P+LV+
Sbjct: 179 DAVTVSLHCEQNFP----ARKAQSDWDIPLPRGMGDEDYLKVVDDILNYLLPIYQPDLVL 234
Query: 274 YNAGTDILEGDPLGMLKV 291
Y+AG D+ + D LG L++
Sbjct: 235 YDAGVDVHKDDALGYLQL 252
>gi|375111108|ref|ZP_09757319.1| histone deacetylase superfamily protein [Alishewanella jeotgali
KCTC 22429]
gi|374568650|gb|EHR39822.1| histone deacetylase superfamily protein [Alishewanella jeotgali
KCTC 22429]
Length = 312
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 122/265 (46%), Gaps = 29/265 (10%)
Query: 36 PLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHS 95
PL+Y P Y S L + H + K+ + Q L + G + ++ P + L ++H
Sbjct: 7 PLVYHPCY--SELTLPANHRYPIGKYRTLYQRLLALG-VPQSAFYLPQAIKAQALELLHE 63
Query: 96 ESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTILAAKLA 147
+Y+ +L + R++ +P+ Q+ GGT+L A+LA
Sbjct: 64 PAYVNALCHGT--------------LDARAMRRIGFPWSPQLIARSLTSLGGTLLCAELA 109
Query: 148 KERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHE 207
E G A+++ GG+HH EG GFC + D++ + Q I + I D D HQG+G
Sbjct: 110 LEHGLALHLSGGYHHAFYAEGSGFCLFNDLAFAA-LSLQQRGIGPIQIFDCDVHQGDGSA 168
Query: 208 KDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTF 267
F+ +S + + +P ++ D + + T YL+ + ++L+ +
Sbjct: 169 ALFADNSGIITASLHCEKNFP---ARKQRSDWDIGLERDCTDQTYLEAVSQSLDTLLRWY 225
Query: 268 DPELVIYNAGTDILEGDPLGMLKVK 292
PELV+Y+AG DI D LG+L +
Sbjct: 226 QPELVLYDAGVDIHRQDDLGLLNIS 250
>gi|261209974|ref|ZP_05924273.1| histone deacetylase/AcuC/AphA family protein [Vibrio sp. RC341]
gi|260840920|gb|EEX67457.1| histone deacetylase/AcuC/AphA family protein [Vibrio sp. RC341]
Length = 306
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 118/268 (44%), Gaps = 28/268 (10%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKW---GRICQFLSSEGFLDKNCIVEPLEASKEDLL 91
+PLIY P Y L + +P + + + Q SE + + P A+ +
Sbjct: 2 IPLIYHPIYSQLDLPVGHRYPINKYRLLYEEIVRQQEHSEEWRTAFHFMAPQMAALSLVR 61
Query: 92 VVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQ--------VGGTILA 143
VH Y+++L +P + R++ +P+ ++ VGGT L
Sbjct: 62 SVHDSDYVRTLLEGT-------LPAAKM-------RRIGFPWSEKLIERTLFSVGGTCLT 107
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQG 203
+ A G AI++ GG+HH D G GFC + D+++ H+A + +V+IID D H G
Sbjct: 108 VEHALHSGLAIHLSGGYHHAHVDFGSGFCLFNDLAIAAHFALSLSGVDKVLIIDSDVHHG 167
Query: 204 NGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVA 263
+G + + L +P A D +E T +E++ + +E+A
Sbjct: 168 DGTATLCAQRDDIITLSFHCDKNFPARKPAS---DMDIEFCKQTGDSEFISTFKQVVEIA 224
Query: 264 GHTFDPELVIYNAGTDILEGDPLGMLKV 291
P+L+IY+AG DI D LG L +
Sbjct: 225 VSVHQPDLIIYDAGVDIHHDDELGYLSI 252
>gi|390944571|ref|YP_006408332.1| deacetylase [Belliella baltica DSM 15883]
gi|390417999|gb|AFL85577.1| deacetylase, histone deacetylase/acetoin utilization protein
[Belliella baltica DSM 15883]
Length = 301
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 111/257 (43%), Gaps = 16/257 (6%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
L + YSP Y L + + H F K+ + + L EG + EP + +L H
Sbjct: 3 LKIAYSPLYQ---LDLPEGHRFPMEKYELLPEQLLYEGTVTSANFFEPKDLDNRWVLNTH 59
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
Y + L N+ + FP L+ R+ + G+I A+ A E G
Sbjct: 60 DFDYFEKLL---NLRLSKSEIRKTGFPLSKALIDRET-----HIMQGSIEASLFALEYGI 111
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
A+N+ GG HH D G GFC DI++ +Y + +V++IDLD HQGNG + F +
Sbjct: 112 AMNIAGGTHHAFTDRGEGFCLLNDIAISANYLLENFLVKKVLVIDLDVHQGNGTAQIFEN 171
Query: 213 DSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELV 272
V+ M YP E D + + ++YL L L P+ +
Sbjct: 172 KDEVFTFSMHGASNYPMHKEKS---DLDIGLPDKIQDDQYLDLLQLHLVPLIDQVQPDFI 228
Query: 273 IYNAGTDILEGDPLGML 289
IY G D+L+ D LG L
Sbjct: 229 IYQCGVDVLDSDKLGRL 245
>gi|149188179|ref|ZP_01866474.1| Histone deacetylase/AcuC/AphA family protein [Vibrio shilonii AK1]
gi|148838167|gb|EDL55109.1| Histone deacetylase/AcuC/AphA family protein [Vibrio shilonii AK1]
Length = 309
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 130/273 (47%), Gaps = 41/273 (15%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQ-------FLSSEGFLDKNCIVEPLEASK 87
+PLIY P Y S L + + H + +K+ + + L+ F+ K P +
Sbjct: 6 VPLIYHPIY--SDLPLPEGHRYPINKYRLLYEEVERKYLRLAESPFVIKT----PSALTV 59
Query: 88 EDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GG 139
E + VH + Y++ L + +P + R++ +P+ +Q+ GG
Sbjct: 60 EQVQQVHCKDYVEDLVTG-------SLPAARI-------RRIGFPWTEQLIQRTLTSAGG 105
Query: 140 TILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLD 199
T LAA+ A E G AI++ GG+HH D G GFC + D+ + A ++ +V+I+D D
Sbjct: 106 TCLAAQQAMEYGLAIHLSGGYHHAHYDFGSGFCLFNDLIIAAQNA-IEHGAEKVLIVDSD 164
Query: 200 AHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARR-FIDQKVEVVSGTTTNEYLKKLDE 258
H G+G + ++ L + +P AR+ D V + G + E+L +
Sbjct: 165 VHHGDGSATLAAGTDQIVTLSLHCEKNFP----ARKPLSDMDVPLSRGASDKEFLASFKQ 220
Query: 259 ALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+E+A P+L+IY+AG DI E D LG L+V
Sbjct: 221 VVELAIRLHQPDLIIYDAGVDIHEDDELGYLQV 253
>gi|444426852|ref|ZP_21222255.1| hypothetical protein B878_12940 [Vibrio campbellii CAIM 519 = NBRC
15631]
gi|444239867|gb|ELU51421.1| hypothetical protein B878_12940 [Vibrio campbellii CAIM 519 = NBRC
15631]
Length = 307
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 121/268 (45%), Gaps = 29/268 (10%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQF----LSSEGFLDKNCIVEPLEASKEDL 90
LPLIY P Y S L + + H + K+ + Q L SE + K +P S +++
Sbjct: 2 LPLIYHPIY--SQLDLPEGHRYPIMKYHHLHQAVLEKLGSEDWGGKIEFFQPTPLSTDEI 59
Query: 91 LVVHSESYLKSLQSSPNVSIIIEVPPVAL----FP--NCLVQRKVLYPFRKQVGGTILAA 144
VHSE Y+ L + +P + FP L+ R + GT+L A
Sbjct: 60 KRVHSEEYVDLLVTGA-------MPAAKMRRIGFPWSEALITRTL-----TSTAGTVLTA 107
Query: 145 KLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
+ A E G AI++ GG+HH D G GFC + D+++ + ++ +VMIID D H G+
Sbjct: 108 EKALEHGIAIHLSGGYHHAHKDFGSGFCLFNDLAIAAKHMLDHEHVDKVMIIDSDVHHGD 167
Query: 205 GHEKDFSSDSRVYILDMFNPGIYPRDYEARR-FIDQKVEVVSGTTTNEYLKKLDEALEVA 263
G + + L +P AR+ D V T +L E +++A
Sbjct: 168 GTATLCKDEGDIITLSFHCDKNFP----ARKPDSDLDVPFRRDTDDETFLMTFKEVVQMA 223
Query: 264 GHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ P++VIY+AG DI D LG V
Sbjct: 224 INLHRPDMVIYDAGVDIHTDDELGYFNV 251
>gi|170719842|ref|YP_001747530.1| histone deacetylase superfamily protein [Pseudomonas putida W619]
gi|169757845|gb|ACA71161.1| histone deacetylase superfamily [Pseudomonas putida W619]
Length = 304
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 117/261 (44%), Gaps = 20/261 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G ++ P + L + H
Sbjct: 3 LPLIYHDDYSPEF---PPEHRFPMDKFRLLRDHLVESGLTTDQALLRPQICPNDILALAH 59
Query: 95 SESYLKSL---QSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
Y++ + S + +P + L +R V + VGG++LAA++A + G
Sbjct: 60 DRDYIERYMHGELSREDQRRLGLP----WSEALARRTV-----RAVGGSLLAAEMALQHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A ++ GG HH D GFC + D+++ Y + RV+I D D HQG+G +
Sbjct: 111 LACHLAGGTHHAHFDHPAGFCIFNDLAVISRYLLEAGRVHRVLIFDCDVHQGDGTARILQ 170
Query: 212 SDSRVYILDMFNPGIYPRDYEARR-FIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPE 270
+ + +P AR+ D + + G YLK +++AL + P+
Sbjct: 171 DTPDAITVSLHCEQNFP----ARKAHSDWDIPLPRGMGDAAYLKVVEDALNYLLPLYQPD 226
Query: 271 LVIYNAGTDILEGDPLGMLKV 291
LV+Y+AG D+ + D LG L++
Sbjct: 227 LVLYDAGVDVHKDDALGYLQL 247
>gi|416407187|ref|ZP_11688248.1| Histone deacetylase superfamily [Crocosphaera watsonii WH 0003]
gi|357260908|gb|EHJ10237.1| Histone deacetylase superfamily [Crocosphaera watsonii WH 0003]
Length = 283
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 91/177 (51%), Gaps = 17/177 (9%)
Query: 126 QRKVLYPFRKQ--------VGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADI 177
QR++ P+ + VGGTIL AKLA + G A N GG HH + G GFC + D+
Sbjct: 55 QRRIGLPWSEALVKRTCIAVGGTILTAKLALKFGLACNTAGGTHHAFPNYGSGFCIFNDL 114
Query: 178 SL--CIHYAFVQLN-ISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEAR 234
++ C+ QL + +V+IIDLD HQG+G K F +D V+ M +PR+ +
Sbjct: 115 AIATCV---LQQLKLVQKVLIIDLDVHQGDGTAKIFENDETVFTFSMHCESNFPREKQKS 171
Query: 235 RFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
D V + G + YL+ L + L P+L++Y+AG DI D G L +
Sbjct: 172 ---DLDVALPKGLDDDGYLQILSQYLPDLLSEIKPDLILYDAGVDIHANDHFGKLSL 225
>gi|408490735|ref|YP_006867104.1| histone deactylase class IV [Psychroflexus torquis ATCC 700755]
gi|408468010|gb|AFU68354.1| histone deactylase class IV [Psychroflexus torquis ATCC 700755]
Length = 302
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 105/240 (43%), Gaps = 15/240 (6%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV--VHSESYLKSLQSSPNVSII 111
H F K+ + + L EG + EP + + VH+ YL+ L N+SI
Sbjct: 18 HRFPMDKYDLLPKQLLHEGTCEPENFFEPQINLDNETYIQSVHTSDYLEQLY---NISIE 74
Query: 112 IEVPPVALFPNC--LVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGG 169
V FP LV+R+ R GTI A A E G ++N+ GG HH +D G
Sbjct: 75 PRVARKIGFPLSAELVKRE-----RIITNGTIEACNYALEYGVSMNIAGGTHHAYSDHGE 129
Query: 170 GFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPR 229
FC D ++ HY +++++DLD HQGNG + F D RV+ M YP
Sbjct: 130 AFCMLNDQAIAAHYLLQNKLAKQILVVDLDVHQGNGTAEIFQKDDRVFTFSMHGKSNYPF 189
Query: 230 DYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGML 289
E D + + ++YL+ L L P+ + + +G DIL D LG L
Sbjct: 190 KKEIS---DLDIPMEDNCDDDQYLETLKVTLPKLIDQVKPDFIFFLSGVDILSTDKLGKL 246
>gi|409397154|ref|ZP_11248092.1| histone deacetylase family protein [Pseudomonas sp. Chol1]
gi|409118314|gb|EKM94714.1| histone deacetylase family protein [Pseudomonas sp. Chol1]
Length = 354
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 115/262 (43%), Gaps = 18/262 (6%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LPL++ DY + H F K+ + L G + P+ + L +
Sbjct: 1 MSLPLVFHDDYSPP---LPPGHRFPMEKFRLLRDHLVDSGLTTDAALRRPMLCRHDVLNL 57
Query: 93 VHSESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
H +Y+ S SP + +P + L QR V + VGG++L A+LA +
Sbjct: 58 AHDANYVARYCSGDMSPAELRRLGLP----WSPALAQRTV-----RAVGGSLLTAELALQ 108
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKD 209
G A ++ GG HH D GFC + D+++ Y + RV+I D D HQG+G +
Sbjct: 109 HGLACHLAGGTHHAHRDHASGFCIFNDLAVVALYLLESGRVGRVLIFDCDVHQGDGTARI 168
Query: 210 FSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDP 269
+ + + +P + D + + G EYL+ +D+ L + P
Sbjct: 169 LDGVADAVTVSLHCEKNFP---VRKATSDWDIPLAPGLGDAEYLRIVDDTLNYLLPLYQP 225
Query: 270 ELVIYNAGTDILEGDPLGMLKV 291
+LV+Y+AG D+ D LG+L +
Sbjct: 226 DLVLYDAGVDVHRDDALGLLDL 247
>gi|254432288|ref|ZP_05045991.1| histone deacetylase family protein [Cyanobium sp. PCC 7001]
gi|197626741|gb|EDY39300.1| histone deacetylase family protein [Cyanobium sp. PCC 7001]
Length = 304
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 114/260 (43%), Gaps = 18/260 (6%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
+ PL+Y P Y + H F +K+ + + L + +PL + L
Sbjct: 1 MRPPLVYHPAYSAP---LPSSHRFPMAKFRMLLERLLQLDLATPAALHQPLPVPRRWLEA 57
Query: 93 VHSESYLKSL---QSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
VH +Y ++ + S I +P LV+R L VGGT+L A+LA
Sbjct: 58 VHPRAYHQAFARAELSHADQRRIGLPAT----QPLVRRTWL-----SVGGTLLTARLALR 108
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKD 209
G A ++ GG HH G GFC + D+++ + + R++++DLD HQG+G
Sbjct: 109 HGLACHLAGGTHHAFPTYGSGFCIFNDVAVACSVLLQEGAVRRLLVVDLDVHQGDGTAAI 168
Query: 210 FSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDP 269
F+++ RV+ L +P + D + + G EYL + L P
Sbjct: 169 FAAEPRVFTLSAHGASNFPLRKQTS---DLDIPLSDGMEDQEYLVAIGSHLPDLLDQLQP 225
Query: 270 ELVIYNAGTDILEGDPLGML 289
+LV+YNAG D D LG L
Sbjct: 226 DLVLYNAGVDPHRDDRLGRL 245
>gi|116621031|ref|YP_823187.1| histone deacetylase superfamily protein [Candidatus Solibacter
usitatus Ellin6076]
gi|116224193|gb|ABJ82902.1| histone deacetylase superfamily [Candidatus Solibacter usitatus
Ellin6076]
Length = 299
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 114/241 (47%), Gaps = 19/241 (7%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSL---QSSPNVSI 110
H F + K+ + L +E + P E ++ +L H E Y++++ P V
Sbjct: 21 HKFPTQKYAMLRSKLEAEHRFELTP-APPAEIAQLEL--AHEEQYVRAILHGDVDPRVMR 77
Query: 111 IIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGG 170
I P + LV+R + VGGT+ A++ A E G N+ GG HH EG G
Sbjct: 78 RIGFP----WSEALVRRTL-----ASVGGTLAASRDAMESGLGGNLAGGTHHAFRAEGSG 128
Query: 171 FCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRD 230
FC + D+++ I + +R +IDLD HQG+G F SD V + + +P
Sbjct: 129 FCVFNDLAVAILMLRREGLAARAAVIDLDVHQGDGTASIFESDPSVLTVSIHGENNFPFR 188
Query: 231 YEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLK 290
+ R ID + + GT+ +EY+ + L V F PE+++Y AG D L D LG L
Sbjct: 189 KQRSR-ID--IGLSDGTSDDEYISHVQSMLPVV-LAFQPEVMLYQAGVDGLASDRLGRLA 244
Query: 291 V 291
+
Sbjct: 245 L 245
>gi|359436411|ref|ZP_09226516.1| histone deacetylase family protein [Pseudoalteromonas sp. BSi20311]
gi|358028866|dbj|GAA62765.1| histone deacetylase family protein [Pseudoalteromonas sp. BSi20311]
Length = 267
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 104/217 (47%), Gaps = 13/217 (5%)
Query: 80 VEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNC--LVQRKVLYPFRKQV 137
+ P A+ L + HS Y+ + N S+ + FP+ LV+R LY V
Sbjct: 13 ISPSPATTAQLSLCHSSDYIANF---LNGSLTDKAVKKMGFPHSPELVER-TLYS----V 64
Query: 138 GGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIID 197
G +I AA+ A + G A N+ GG+HH ++ G GFC + D+++ + V+I D
Sbjct: 65 GASIQAAESALKNGLAANLSGGYHHAYSNYGSGFCIFNDLAIAAAHLITTEQADTVLIFD 124
Query: 198 LDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLD 257
D HQG+G + ++ + +PR ++ + + + TT EYL L+
Sbjct: 125 CDVHQGDGTAQITQQHEQIVSCSIHCEQNFPRQ---KQLSNYDFGLPANTTDAEYLTTLE 181
Query: 258 EALEVAGHTFDPELVIYNAGTDILEGDPLGMLKVKWG 294
+ALE+ P++++YNAG DI D LG+ V
Sbjct: 182 QALELCVRLHQPDIILYNAGADIYTKDELGLFDVSLA 218
>gi|399063313|ref|ZP_10746847.1| deacetylase, histone deacetylase/acetoin utilization protein
[Novosphingobium sp. AP12]
gi|398032393|gb|EJL25735.1| deacetylase, histone deacetylase/acetoin utilization protein
[Novosphingobium sp. AP12]
Length = 303
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 121/257 (47%), Gaps = 14/257 (5%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
L +++ P Y + E+ F K+ + + L G + P +E L VH
Sbjct: 2 LHVVHHPGYVVE---TERGGTFPHDKYALVMRVLDESGV--AMTVHSPEVMPREWLEAVH 56
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAI 154
+Y+ + S +VS + + + +R L P GGT LAAKLA + G+A
Sbjct: 57 EPAYVDEVISC-SVSAAKQRRIGFVIDERISRRSQLSP-----GGTWLAAKLALQYGYAA 110
Query: 155 NVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDS 214
N GG HH AD G G+C + D++L + + ++SR++I+DLD HQG+G + S
Sbjct: 111 NSAGGSHHALADSGAGYCVFNDLALAANRLIDEGDVSRILILDLDVHQGDGTAALTAGRS 170
Query: 215 RVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIY 274
++ L + +P +AR +D + + T YL+ L +L F PEL++
Sbjct: 171 DIFTLSIHAEKNFP-TRKARSSLD--IGLPDATDDAGYLEALTGSLRPVLDHFMPELILL 227
Query: 275 NAGTDILEGDPLGMLKV 291
AG D D LG L +
Sbjct: 228 QAGVDAHADDKLGRLSL 244
>gi|153833853|ref|ZP_01986520.1| histone deacetylase/AcuC/AphA family protein [Vibrio harveyi HY01]
gi|148869795|gb|EDL68769.1| histone deacetylase/AcuC/AphA family protein [Vibrio harveyi HY01]
Length = 307
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 122/268 (45%), Gaps = 29/268 (10%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQF----LSSEGFLDKNCIVEPLEASKEDL 90
LPLIY P Y S L + + H + K+ + Q L SE + K +P S +++
Sbjct: 2 LPLIYHPIY--SQLDLPEGHRYPIMKYHHLHQAVVEKLGSEDWGGKIEFFQPTPLSTDEI 59
Query: 91 LVVHSESYLKSLQSSPNVSIIIEVPPVAL----FP--NCLVQRKVLYPFRKQVGGTILAA 144
VH E Y+ L + +P + FP L+ R + GT+L A
Sbjct: 60 KRVHCEEYVDLLVTGA-------MPAAKMRRIGFPWSEALITRTL-----TSTAGTVLTA 107
Query: 145 KLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
+ A E G AI++ GG+HH D G GFC + D+++ + ++ +VMIID D H G+
Sbjct: 108 EKALEHGIAIHLSGGYHHAHKDFGSGFCLFNDLAIAAKHMLDHEHVDKVMIIDSDVHHGD 167
Query: 205 GHEKDFSSDSRVYILDMFNPGIYPRDYEARR-FIDQKVEVVSGTTTNEYLKKLDEALEVA 263
G ++ + L +P AR+ D V + T +L E +++A
Sbjct: 168 GTATLCKDEADIITLSFHCDKNFP----ARKPDSDLDVPLRRDTDDETFLMTFKEVVQMA 223
Query: 264 GHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ P++VIY+AG DI D LG V
Sbjct: 224 INLHRPDMVIYDAGVDIHTDDELGYFNV 251
>gi|411008749|ref|ZP_11385078.1| histone deacetylase/AcuC/AphA family protein [Aeromonas aquariorum
AAK1]
Length = 298
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 121/262 (46%), Gaps = 21/262 (8%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
L + + P Y S L + H F +K+ + + L + G+ + E AS+ +
Sbjct: 1 MSLRIFHHPLY--SALALPARHRFPLAKYQALFEQLENLGY----PLAEAAPASRAQIER 54
Query: 93 VHSESYLKS-LQSSPNVSIIIEVPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKE 149
VH +Y+++ L + + I ++ FP L++R + + VG T+ A++ A
Sbjct: 55 VHDAAYVEAALTGTLDADAIRQLG----FPWSPVLIERTL-----RSVGATLAASRHALA 105
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKD 209
+G + + GG+HH D G GFC + D+ + + +V+I+DLD HQG+G
Sbjct: 106 QGCGLQISGGYHHAHRDFGSGFCLFNDLVIAAQTCLDEGRCEQVLIVDLDVHQGDGSAAL 165
Query: 210 FSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDP 269
+ L + +PR A + SG + YL L EAL +A + P
Sbjct: 166 CQGRRDIITLSLHGEHNFPRHKPASHM---DFPLPSGMEDDAYLSTLAEALNLALRLYAP 222
Query: 270 ELVIYNAGTDILEGDPLGMLKV 291
+L++Y AG D+ D LG L +
Sbjct: 223 DLILYQAGVDVHHADELGYLAL 244
>gi|407791878|ref|ZP_11138955.1| histone deacetylase superfamily protein [Gallaecimonas xiamenensis
3-C-1]
gi|407198705|gb|EKE68734.1| histone deacetylase superfamily protein [Gallaecimonas xiamenensis
3-C-1]
Length = 299
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 123/272 (45%), Gaps = 43/272 (15%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV- 93
LPL+Y P Y + H F K+ R+ + L+ D + +++ D L
Sbjct: 2 LPLVYHPSYSFP---LPANHRFPVGKYLRLKEGLAE----DLAAVAHRYFSAEPDPLYPA 54
Query: 94 --HSESYLKSL--QSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTI 141
H Y++ QS P + R++ +P Q+ GT+
Sbjct: 55 HWHCPDYVQGFLSQSLPAT----------------MARRIGFPMSDQLIERTLAANKGTL 98
Query: 142 LAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAH 201
L A+LA + G A+++ GG+HH +GGGFC + D+++ Q RV++ D D H
Sbjct: 99 LCAELALDHGLALHLSGGYHHAHYAQGGGFCIFNDLAMAAQTLVDQGKARRVLVFDCDVH 158
Query: 202 QGNGHEKDFSSDSRVYILDMFNPGIYP-RDYEARRF-IDQKVEVVSGTTTNEYLKKLDEA 259
QG+G + D + ++ R+Y AR+ D V + G T YL + +A
Sbjct: 159 QGDGTATMLAQHP-----DCISVSVHAQRNYPARKPDSDLDVALPEGLTDQPYLDAVTDA 213
Query: 260 LEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
L++A + P+LV+Y+AG DI D LG KV
Sbjct: 214 LDLALRYYQPDLVLYDAGVDIHADDELGHFKV 245
>gi|388598754|ref|ZP_10157150.1| hypothetical protein VcamD_02518 [Vibrio campbellii DS40M4]
Length = 307
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 123/268 (45%), Gaps = 29/268 (10%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQF----LSSEGFLDKNCIVEPLEASKEDL 90
LPLIY P Y S L + + H + K+ + Q L++E + ++ +P S +++
Sbjct: 2 LPLIYHPIY--SQLDLPEGHRYPIMKYHHLHQAVLEKLANESWGEQVEFFQPTSLSVDEV 59
Query: 91 LVVHSESYLKSLQSSPNVSIIIEVPPVAL----FP--NCLVQRKVLYPFRKQVGGTILAA 144
VHSE Y+ L + +P + FP L+ R + GT+L A
Sbjct: 60 KRVHSEEYVDLLVTGA-------MPAAKMRRIGFPWSEALITRTL-----TSTAGTVLTA 107
Query: 145 KLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
+ A E G AI++ GG+HH D G GFC + D+++ + ++ +VMIID D H G+
Sbjct: 108 EKALEHGIAIHLSGGYHHAHKDFGSGFCLFNDLAIAAKHMLDHEHVDKVMIIDSDVHHGD 167
Query: 205 GHEKDFSSDSRVYILDMFNPGIYPRDYEARR-FIDQKVEVVSGTTTNEYLKKLDEALEVA 263
G + + L +P AR+ D V T +L E +++A
Sbjct: 168 GTATLCKDEGYIITLSFHCDKNFP----ARKPDSDLDVPFRRDTDDETFLMTFKEVVQMA 223
Query: 264 GHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ P++VIY+AG DI D LG V
Sbjct: 224 INLHRPDMVIYDAGVDIHTDDELGYFNV 251
>gi|149419640|ref|XP_001518860.1| PREDICTED: histone deacetylase 11-like, partial [Ornithorhynchus
anatinus]
Length = 172
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/89 (52%), Positives = 65/89 (73%)
Query: 203 GNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEV 262
GNGHE+DF D+RVYI+D++N IYP D A+R I +K+E+ GT EYL+K++ +
Sbjct: 1 GNGHERDFMYDNRVYIMDVYNRYIYPGDGFAKRAIKRKIELDWGTEDKEYLQKVEMHVAG 60
Query: 263 AGHTFDPELVIYNAGTDILEGDPLGMLKV 291
A + P++VIYNAGTDIL+GDPLG L +
Sbjct: 61 ALNELRPDVVIYNAGTDILDGDPLGGLAI 89
>gi|398845414|ref|ZP_10602449.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM84]
gi|398253577|gb|EJN38699.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM84]
Length = 304
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 115/261 (44%), Gaps = 20/261 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G ++ P + L + H
Sbjct: 3 LPLIYHDDYSPEF---PAEHRFPMDKFRLLHDHLVDSGLTCDQALLRPDICPNDILALAH 59
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
Y++ + S + +P + L +R V + VGG++L A++A G
Sbjct: 60 DRGYIERYMNGDLSREDQRRLGLP----WSEALARRTV-----RAVGGSLLTAEMALRHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A ++ GG HH D GFC + D+++ Y + RV+I D D HQG+G +
Sbjct: 111 LACHLAGGTHHAHYDHPAGFCIFNDLAVISRYLLEAGRVHRVLIFDCDVHQGDGTARILQ 170
Query: 212 SDSRVYILDMFNPGIYPRDYEARR-FIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPE 270
+ + +P AR+ D + + G YLK +D+AL + P+
Sbjct: 171 DTPDAITVSLHCEQNFP----ARKAHSDWDIPLPRGMGDTAYLKVVDDALNYLLPLYQPD 226
Query: 271 LVIYNAGTDILEGDPLGMLKV 291
LV+Y+AG D+ + D LG L++
Sbjct: 227 LVLYDAGVDVHKDDALGYLQL 247
>gi|330507276|ref|YP_004383704.1| histone deacetylase family protein [Methanosaeta concilii GP6]
gi|328928084|gb|AEB67886.1| histone deacetylase family protein [Methanosaeta concilii GP6]
Length = 373
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 124/269 (46%), Gaps = 26/269 (9%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLD-KNCIVEPLEASKEDLLVVHS 95
L YS + G E HPF+ ++ + G +D K C +EP AS+ED+L VH+
Sbjct: 4 LYYSEKFQGYNFGPE--HPFNPARLMLTFSLMEESGLIDEKVCRLEPRPASEEDILRVHT 61
Query: 96 ESYLKSLQ-SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK-LAKERGWA 153
YL +++ P+++ + +F ++L G +I AA+ + E A
Sbjct: 62 PEYLAAVKLEEPDLAFGLGSDDTPVFAGICESSRML------AGASIDAARRIIAEDCSA 115
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSD 213
N+GGG HH GFC + D +L I ++ RV+ ID+D H G+G ++ F +D
Sbjct: 116 FNIGGGLHHALPTVASGFCVFDDPALAIR--VLRDGFDRVLYIDIDGHHGDGVQQIFYTD 173
Query: 214 SRVYILDMFNPGIY----------PRDYEARRF-IDQKVEVVSGTTTNEYLKKLDEALEV 262
V + M G+Y D E + + ++ + + SG +YL+ D+ + +
Sbjct: 174 PTVLTISMHESGLYLFPGTGFIEETGDGEGKGYSVNIPMPMYSG--DEQYLRAFDQIVPI 231
Query: 263 AGHTFDPELVIYNAGTDILEGDPLGMLKV 291
F P+ V+ G D DPL L V
Sbjct: 232 LFEWFRPQAVVAQLGIDTHYSDPLTSLNV 260
>gi|116620212|ref|YP_822368.1| histone deacetylase superfamily protein [Candidatus Solibacter
usitatus Ellin6076]
gi|116223374|gb|ABJ82083.1| histone deacetylase superfamily [Candidatus Solibacter usitatus
Ellin6076]
Length = 305
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 122/264 (46%), Gaps = 27/264 (10%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGR----ICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
+Y YD++ LG E + P +W R +F ++E F V P A+ +D+ +
Sbjct: 6 FVYHDRYDLN-LG-EHVFPSQKFRWLRDRLLHTRFAAAEDF------VTPESATDDDVRL 57
Query: 93 VHSESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
VH Y+ L+ S + +E+P R+++ F GG+ILAA+LA +
Sbjct: 58 VHDPEYVAKLRGGTLSYQDILRLEIP---------YSRQMVEAFWLAAGGSILAARLALQ 108
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKD 209
G N+GGGFHH G GFCA D+++ + I R M++D D H GNG
Sbjct: 109 DGIGFNIGGGFHHAFPGHGEGFCAINDVAIAVRRLQADRLIKRAMVVDCDVHHGNGTAAI 168
Query: 210 FSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDP 269
F+ D V+ L + YP + + + + G EYL +L A F P
Sbjct: 169 FTDDQSVFTLSIHQFNNYPSE---KPLSSLDIHLTDGIGDAEYLHRLGNGYRAALTMFKP 225
Query: 270 ELVIYNAGTDILEGDPLGMLKVKW 293
EL++Y AG D D LG L + +
Sbjct: 226 ELLMYVAGADPYMEDQLGGLSLTF 249
>gi|398804556|ref|ZP_10563549.1| deacetylase, histone deacetylase/acetoin utilization protein
[Polaromonas sp. CF318]
gi|398093553|gb|EJL83931.1| deacetylase, histone deacetylase/acetoin utilization protein
[Polaromonas sp. CF318]
Length = 295
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 106/229 (46%), Gaps = 39/229 (17%)
Query: 85 ASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPF--------RKQ 136
A+ +L +VH+ Y+ ++ +P A QR++ +P+ R+
Sbjct: 26 ATDGELALVHTPDYIDAISHG-------TLPAAA-------QREIGFPWSPGMAERARRS 71
Query: 137 VGGTILAAKLA------KERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNI 190
G T+ AA++A G A N+ GG HH A +GGGFC + D ++ +
Sbjct: 72 AGATVAAARVAMGAPGRPGEGVAANLAGGTHHSYAHKGGGFCVFNDAAVAARLMQAEWAR 131
Query: 191 SR--------VMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVE 242
R V IIDLD HQGNG F++D V+ L + +P EA D V+
Sbjct: 132 QRRHGRKPLQVAIIDLDVHQGNGTASIFANDPSVFTLSLHGQKNFPFRKEAS---DLDVD 188
Query: 243 VVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ G YL+ L+ AL+ F+P L+++ AG D EGD LG L +
Sbjct: 189 LPDGCGDAAYLQALEHALDELERRFEPGLILFLAGADPYEGDRLGRLAL 237
>gi|402823253|ref|ZP_10872687.1| histone deacetylase superfamily protein [Sphingomonas sp. LH128]
gi|402263213|gb|EJU13142.1| histone deacetylase superfamily protein [Sphingomonas sp. LH128]
Length = 303
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 121/265 (45%), Gaps = 30/265 (11%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
L +++ P Y + E+ F K+ + + L G + P +E L VH
Sbjct: 2 LHVVHHPGYAVE---TERTGTFPHDKYALVMRLLGESGV--PMTVHAPEVMPREWLEAVH 56
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTILAAKL 146
Y+ + I VP QR++ + +++ GGT LAAKL
Sbjct: 57 DPVYVAQV-------IGCAVPTAK-------QRRIGFAIDERISRRSQLSPGGTWLAAKL 102
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
A + G+A N GG HH AD G G+C + D++L + + ++SR++I+DLD HQG+G
Sbjct: 103 ALKHGYAANSAGGSHHALADTGAGYCVFNDLALAANRLIEEGDVSRILILDLDVHQGDGT 162
Query: 207 EKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHT 266
+ S ++ L + +P +AR +D V + T YL+ L +L +
Sbjct: 163 AALTAGRSDIFTLSIHAEKNFP-TRKARSSLD--VGLPDATGDAGYLEALAGSLPMVLDR 219
Query: 267 FDPELVIYNAGTDILEGDPLGMLKV 291
F P+L++ AG D D LG L +
Sbjct: 220 FVPDLILLQAGVDAHADDKLGRLSL 244
>gi|156094402|ref|XP_001613238.1| histone deacetylase [Plasmodium vivax Sal-1]
gi|148802112|gb|EDL43511.1| histone deacetylase, putative [Plasmodium vivax]
Length = 369
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 127/259 (49%), Gaps = 15/259 (5%)
Query: 36 PLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKE--DLLVV 93
P ++ P Y S EK H F K+ +I L EG + + + S+ L +
Sbjct: 76 PYVFHPIYS-SVPMKEKYHRFKIKKYEKIFSRLIEEGIYNADYAIPSCNISETIISLCSI 134
Query: 94 HSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWA 153
H E++++ + S + +E + L PN LV R F ++ GTIL++ LA +
Sbjct: 135 HDEAFVEEIFSIVTRNEQVEKYELTLHPN-LVCR-----FLIEINGTILSSLLAMKHFMC 188
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSD 213
+++GGG HH + G GFC + D+++ +H+ I + +I+D+D HQG+G + F +
Sbjct: 189 MHIGGGNHHSKRNRGDGFCIFNDVAIAVHFLLSHGLIDKAIILDVDVHQGDGTAEIFRNC 248
Query: 214 SRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEAL-EVAGHTFDPELV 272
+ V + + +P +A ID VE S TT +YL+ + L ++A ++
Sbjct: 249 ANVKTISLHCRDNFP-PVKAHSTID--VEFDSFTTDGDYLEAYKKVLDDIAAE--QNCII 303
Query: 273 IYNAGTDILEGDPLGMLKV 291
Y AG DI D LG L V
Sbjct: 304 FYLAGVDISADDDLGFLSV 322
>gi|443468645|ref|ZP_21058852.1| Deacetylase [Pseudomonas pseudoalcaligenes KF707]
gi|442897864|gb|ELS24681.1| Deacetylase [Pseudomonas pseudoalcaligenes KF707]
Length = 305
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 118/261 (45%), Gaps = 20/261 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPL+Y DY F H F K+ + + L G + P E L + H
Sbjct: 3 LPLVYHDDYSPPF---PAEHRFPMEKFRLLYRHLLDSGLTTDARLHRPDICPPEVLALAH 59
Query: 95 SESYLKSL---QSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
Y++ + S + +P + L +R V + VGG++ AA+LA E G
Sbjct: 60 CPDYIRRFAEGELSREEQRRLGLP----WSPPLARRTV-----RAVGGSLRAAELALEHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A ++ GG HH D GFC + D+++ Y + RV+I D D HQG+G + +
Sbjct: 111 LACHLAGGTHHAHYDHAAGFCIFNDLAVVSRYLLETGRVQRVLIFDCDVHQGDGTARILA 170
Query: 212 SDSRVYILDMFNPGIYP-RDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPE 270
+ + +P R E+ D + + G EYL+ +++AL + P+
Sbjct: 171 DTPDAITVSLHCEKNFPARKAES----DWDIPLPMGLGDAEYLQVVEDALNYLLPLYQPD 226
Query: 271 LVIYNAGTDILEGDPLGMLKV 291
LV+Y+AG D+ + D LG L++
Sbjct: 227 LVLYDAGVDVHKDDALGYLQL 247
>gi|411119985|ref|ZP_11392361.1| deacetylase, histone deacetylase/acetoin utilization protein
[Oscillatoriales cyanobacterium JSC-12]
gi|410710141|gb|EKQ67652.1| deacetylase, histone deacetylase/acetoin utilization protein
[Oscillatoriales cyanobacterium JSC-12]
Length = 305
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 87/175 (49%), Gaps = 13/175 (7%)
Query: 126 QRKVLYPFRKQ--------VGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADI 177
QR++ P+ + VGGTIL AKLA E G A N GG HH G GFC + D+
Sbjct: 77 QRRIGLPWSPELVNRTCVAVGGTILTAKLALECGIACNTAGGTHHAFPSYGSGFCIFNDM 136
Query: 178 SLCIHYAFVQLN-ISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRF 236
++ QL + +V+I+DLD HQG+G F D V+ M +P ++
Sbjct: 137 AIAAR-VLQQLGLVQQVLIVDLDVHQGDGTAWIFRDDPTVFTFSMHCEVNFP---GTKQQ 192
Query: 237 IDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
D V + G +EYL+ LD L P+LVIY+AG D GD LG L +
Sbjct: 193 SDLDVPLPEGMEDDEYLQTLDTYLPDLLSQVKPDLVIYDAGVDAHMGDRLGKLAL 247
>gi|386361161|ref|YP_006059406.1| deacetylase [Thermus thermophilus JL-18]
gi|383510188|gb|AFH39620.1| deacetylase, histone deacetylase/acetoin utilization protein
[Thermus thermophilus JL-18]
Length = 294
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 117/242 (48%), Gaps = 22/242 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQS---SPNVSI 110
HPF K+G + + L +G L ++ E +E L + H SYL L + S+
Sbjct: 17 HPFPLYKYGGVAEAL--KGLL---PVLPAPEVPREALFLAHEASYLGKLFGEGLTREESL 71
Query: 111 IIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGG 170
+ +P F L++R + GGT+ AA A E G +N+ GG HH G
Sbjct: 72 RLGLP----FSQALLRRAL-----HAAGGTLAAALDALEAGLGLNLAGGTHHAFPGRAEG 122
Query: 171 FCAYADISLCIHYAFVQLNIS-RVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPR 229
+ + D+++ I + + S RV+++DLDAHQGNG F D V+ L + YP
Sbjct: 123 YSLFNDVAVAILWLRAKEGFSGRVLVVDLDAHQGNGTAFFFQEDPSVFTLSLHGERNYPL 182
Query: 230 DYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGML 289
E D V + GT YL L+EALE A F P+LV YNAG D+L GD G L
Sbjct: 183 KKERS---DLDVGLPDGTGDEAYLWALEEALEKA-RAFRPDLVFYNAGVDVLRGDRFGRL 238
Query: 290 KV 291
+
Sbjct: 239 AL 240
>gi|424047263|ref|ZP_17784823.1| histone deacetylase domain protein [Vibrio cholerae HENC-03]
gi|408884107|gb|EKM22861.1| histone deacetylase domain protein [Vibrio cholerae HENC-03]
Length = 306
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 123/269 (45%), Gaps = 31/269 (11%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQF----LSSEGFLDKNCIVEPLEASKEDL 90
LPLIY P Y S L + H + K+ + Q L+SE + + + +P S +D+
Sbjct: 2 LPLIYHPVY--SQLDLPNGHRYPIMKYRYLYQAVMEKLASEDWGGQIEVFQPSLLSTDDI 59
Query: 91 LVVHSESYLKSLQSSPNVSIIIEVPPVAL----FP--NCLVQRKVLYPFRKQVGGTILAA 144
VH Y+ L + +P + FP L+ R + GT+L A
Sbjct: 60 KRVHDGEYVDLLVTG-------TMPAAKMRRIGFPWSEALITRTL-----TSTAGTVLTA 107
Query: 145 KLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
+ A E G AI++ GG+HH + G GFC + D+++ + ++ +VMIID D H G+
Sbjct: 108 EKALEHGVAIHLSGGYHHAHKNFGSGFCLFNDLAIAAKHMLDHEHVDKVMIIDSDVHHGD 167
Query: 205 GHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNE--YLKKLDEALEV 262
G S+ + L +P R D ++V TN+ YL E +E+
Sbjct: 168 GTATICESEPDIVTLSFHCDKNFP-----ARKPDSDLDVPLSRDTNDETYLMAFKEVVEM 222
Query: 263 AGHTFDPELVIYNAGTDILEGDPLGMLKV 291
A + P++VIY+AG DI D LG V
Sbjct: 223 AINLHRPDMVIYDAGVDIHVDDELGYFNV 251
>gi|260779262|ref|ZP_05888154.1| histone deacetylase/AcuC/AphA family protein [Vibrio
coralliilyticus ATCC BAA-450]
gi|260605426|gb|EEX31721.1| histone deacetylase/AcuC/AphA family protein [Vibrio
coralliilyticus ATCC BAA-450]
Length = 308
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 119/269 (44%), Gaps = 30/269 (11%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNC-----IVEPLEASKED 89
+PLIY Y S L + + H + K+ + + F D+ EP + E+
Sbjct: 2 IPLIYHSIY--SELPLPQGHRYPIHKYRLLFNEIEKVRFRDEQWQAFFHYCEPQALTSEE 59
Query: 90 LLVVHSESYLKSLQSSPNVSIIIEVPPVAL----FP--NCLVQRKVLYPFRKQVGGTILA 143
++ H E Y+ L S +P + FP CL++R + GGT L
Sbjct: 60 VMKTHCEQYVSELFSGG-------LPAARMRRIGFPWSECLIERTL-----TSAGGTCLT 107
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQG 203
A+ A E G AI++ GG+HH D G GFC D+ L A I +V+I+D D H G
Sbjct: 108 AEKAIEHGVAIHLSGGYHHAHYDFGSGFCLLNDLVLAAKRALTHEGIEKVLIVDSDVHHG 167
Query: 204 NGHEKDFSSDSRVYILDMFNPGIYPRDYEARR-FIDQKVEVVSGTTTNEYLKKLDEALEV 262
+G + + L +P AR+ D V + T+ E+L +E+
Sbjct: 168 DGTATLCADQDDIVTLSFHCDKNFP----ARKPDSDMDVALPRETSDEEFLSSFASVVEM 223
Query: 263 AGHTFDPELVIYNAGTDILEGDPLGMLKV 291
A + P+L++Y+AG DI + D LG V
Sbjct: 224 AINLHQPDLILYDAGVDIHQDDELGYFNV 252
>gi|294139409|ref|YP_003555387.1| histone deacetylase/AcuC/AphA family protein [Shewanella violacea
DSS12]
gi|293325878|dbj|BAJ00609.1| histone deacetylase/AcuC/AphA family protein [Shewanella violacea
DSS12]
Length = 311
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 120/266 (45%), Gaps = 24/266 (9%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVE-----PLEASKED 89
LPLIY P Y S L + + H + K+ + + + D N E P + +D
Sbjct: 2 LPLIYHPIY--SQLPLPEGHRYPIMKYQFLYDAIMEKTQNDTNWQQEITFFSPQALTLQD 59
Query: 90 LLVVHSESYLKSL---QSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKL 146
+ VH Y+ L Q N I P + L+QR + GT+L A
Sbjct: 60 IKQVHDADYVDMLACGQLPANKMRRIGFP----WSEALMQRTL-----TSAAGTVLTAHK 110
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
A E G AI++ GG+HH D G GFC + D+ L H++ + +I +V+IID D H G+G
Sbjct: 111 AIESGVAIHLSGGYHHAHNDFGSGFCLFNDLVLAAHFSLQKDDIHKVLIIDSDVHHGDGT 170
Query: 207 EKDFSSDSRVYILDMFNPGIYPRDYEARR-FIDQKVEVVSGTTTNEYLKKLDEALEVAGH 265
+ L +P AR+ D V + GT +L + +++A +
Sbjct: 171 ATLCQGRDDIITLSFHCDKNFP----ARKPDSDLDVPLTRGTGDETFLACFQQVVQMAIN 226
Query: 266 TFDPELVIYNAGTDILEGDPLGMLKV 291
P+LVIY+AG D+ D LG L +
Sbjct: 227 LHRPDLVIYDAGVDLHRDDELGYLDI 252
>gi|218528759|ref|YP_002419575.1| histone deacetylase superfamily protein [Methylobacterium
extorquens CM4]
gi|218521062|gb|ACK81647.1| histone deacetylase superfamily [Methylobacterium extorquens CM4]
Length = 297
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 118/263 (44%), Gaps = 29/263 (11%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+P+++ P Y+ + + H F K+GR+ + L + G + + V P A L H
Sbjct: 2 IPIVFHPAYEAE---LPEGHRFPMRKYGRLAEILRARGLV-PDGFVTPEPADAALLSGAH 57
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTILAAKL 146
+Y+ ++ ++ +VP ++R + P + V GGT+ AA+L
Sbjct: 58 DPAYVAAVLAA-------QVPRA-------IERAIGLPVTEAVAARACASAGGTLRAARL 103
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
A G A + GG HH G GFC + D+++ + I+R +I+DLD HQG+G
Sbjct: 104 ALSHGLAGSTAGGSHHARRAGGAGFCVFNDVAVAALALRREGAITRALIVDLDVHQGDGT 163
Query: 207 EKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHT 266
+ + ++ L + YP D + D + + G EY L+ L
Sbjct: 164 ADCLAREPDLFTLSIHCERNYPHD---KVPGDLDIGLPVGLDDAEYCAVLEARLPALIQN 220
Query: 267 FDPELVIYNAGTDILEGDPLGML 289
F P+L+ YNAG D D LG L
Sbjct: 221 FAPDLIFYNAGVDPHRDDRLGRL 243
>gi|418292802|ref|ZP_12904732.1| histone deacetylase family protein [Pseudomonas stutzeri ATCC 14405
= CCUG 16156]
gi|379064215|gb|EHY76958.1| histone deacetylase family protein [Pseudomonas stutzeri ATCC 14405
= CCUG 16156]
Length = 306
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 114/259 (44%), Gaps = 12/259 (4%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LPL+Y DY + H F K+ + L + G ++ P S++ L +
Sbjct: 1 MSLPLVYHDDYSPP---LPPGHRFPMEKFRLLRDHLVALGLTTDEALLRPELCSQDILAL 57
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
H+ Y+ S + + P L QR V + VGG++LAA+ A + G
Sbjct: 58 AHAPDYVTRYCSGEMSRDELRRLGLPWSPE-LAQRTV-----RAVGGSLLAAEQALQHGL 111
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
A ++ GG HH D GFC + D+++ Y + RV+I D D HQG+G + +
Sbjct: 112 ACHLAGGTHHAHHDHASGFCIFNDLAVIALYLLESGRVGRVLIFDCDVHQGDGTARILEN 171
Query: 213 DSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELV 272
+ + + +P + D + + G YLK + + L + P+LV
Sbjct: 172 VADAVTVSLHCEKNFP---TRKAHSDWDIPLPPGMGDEAYLKVVHDTLNYLLPIYQPDLV 228
Query: 273 IYNAGTDILEGDPLGMLKV 291
+Y+AG D+ D LG+L +
Sbjct: 229 LYDAGVDVHRDDALGLLSL 247
>gi|343509659|ref|ZP_08746924.1| histone deacetylase/AcuC/AphA family protein [Vibrio scophthalmi
LMG 19158]
gi|342804010|gb|EGU39349.1| histone deacetylase/AcuC/AphA family protein [Vibrio scophthalmi
LMG 19158]
Length = 260
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 105/222 (47%), Gaps = 27/222 (12%)
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV- 137
+ +P ++ + + H Y+ +L + ++P V + R++ +P+ + +
Sbjct: 2 VFQPKPLTQATISLYHCSDYIGALVTG-------QLPAVKM-------RRIGFPWSEALI 47
Query: 138 -------GGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNI 190
GGT L +LA E+G AI++ GG+HH D G GFC D+ L A I
Sbjct: 48 ERTFTSAGGTWLTTQLAIEQGIAIHLSGGYHHAHYDFGSGFCLINDLVLSAKQALTLEKI 107
Query: 191 SRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARR-FIDQKVEVVSGTTT 249
RV+I+D D H G+G S D R+ L +P AR+ D + T
Sbjct: 108 DRVLIVDSDVHHGDGTATMCSDDERIITLSFHCDKNFP----ARKPNSDIDIGFARETQD 163
Query: 250 NEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
NE+L+ +E A + + P+++IY+AG DI + D LG +
Sbjct: 164 NEFLEHFYSVVETAINLYQPDVIIYDAGVDIHQDDELGYFNI 205
>gi|452749112|ref|ZP_21948882.1| histone deacetylase family protein [Pseudomonas stutzeri NF13]
gi|452006938|gb|EMD99200.1| histone deacetylase family protein [Pseudomonas stutzeri NF13]
Length = 306
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 118/260 (45%), Gaps = 14/260 (5%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LPL++ DY + H F K+ + L + G + ++ P S + L +
Sbjct: 1 MSLPLVFHDDYSPP---LPPGHRFPMEKFRLLRDHLVALGLTTEAALLRPALCSHDILTL 57
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
H +Y++ S + + P L QR V + VGG++LAA+ A + G
Sbjct: 58 AHDRNYVERYCSGAMGRDELRRLGLPWSPE-LAQRTV-----RAVGGSLLAAEQALQHGL 111
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
A ++ GG HH D GFC + D+++ Y + RV+I D D HQG+G + +
Sbjct: 112 ACHLAGGTHHAHHDHASGFCIFNDLAVIALYLLESGRVGRVLIFDCDVHQGDGTARILEN 171
Query: 213 DSRVYILDMFNPGIYPRDYEARR-FIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPEL 271
+ + + +P AR+ D + + G + YLK + + L + P+L
Sbjct: 172 VADAVTVSLHCEKNFP----ARKAHSDWDIPLPPGMGDDAYLKVVHDTLNYLLPIYQPDL 227
Query: 272 VIYNAGTDILEGDPLGMLKV 291
V+Y+AG D+ D LG+L +
Sbjct: 228 VLYDAGVDVHRDDALGLLSL 247
>gi|333375921|ref|ZP_08467719.1| histone deacetylase [Kingella kingae ATCC 23330]
gi|332969379|gb|EGK08404.1| histone deacetylase [Kingella kingae ATCC 23330]
Length = 347
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 108/257 (42%), Gaps = 7/257 (2%)
Query: 38 IYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSES 97
IYSPD F G LHP + I + L + G +E E S L VH+
Sbjct: 40 IYSPDCQAHFAG--SLHPESPERTNAIARALKNSGLWILLQKIEAPEVSDIQLARVHTRR 97
Query: 98 YLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVG 157
YL SL+S + +++ +Q ++ K AK A+
Sbjct: 98 YLSSLESQVPQTGSVKINEDTFLSRDSLQAARKAAGAAVKAVDLVMTKQAKNAFCAVRPP 157
Query: 158 GGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVY 217
G HH AD+ GFC +I++ +A + + RV I+D D H G+G E F D+RV
Sbjct: 158 G--HHAHADKASGFCFINNIAVAAMHAIAEYRLERVAILDFDLHHGDGTEDIFRDDNRVM 215
Query: 218 ILDMFNPGIYP---RDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIY 274
+L F +YP +Y + +G +N + + + F P+L++
Sbjct: 216 LLSTFEHPLYPFCGTEYTGSNPNIANTPLKAGDGSNAFRDAVRQVWLPKLEQFQPQLILL 275
Query: 275 NAGTDILEGDPLGMLKV 291
+AG D DPLG L +
Sbjct: 276 SAGFDAHRDDPLGHLNL 292
>gi|149185536|ref|ZP_01863852.1| hypothetical protein ED21_20964 [Erythrobacter sp. SD-21]
gi|148830756|gb|EDL49191.1| hypothetical protein ED21_20964 [Erythrobacter sp. SD-21]
Length = 313
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 90/174 (51%), Gaps = 11/174 (6%)
Query: 126 QRKVLYPFRKQV--------GGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADI 177
+R++ +P + GGT LAA+LA+ G+A N G HH D G G+C + D+
Sbjct: 74 ERRIGFPVTPHIAQRVQHTNGGTWLAAQLARPHGYAANSAAGSHHALFDTGAGYCVFNDL 133
Query: 178 SLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFI 237
++ + + + R++I+DLD HQG+G ++ V+ L + +P +AR +
Sbjct: 134 AVAANRLIAEGDAERILIVDLDVHQGDGTASLTATRDDVFTLSLHAEKNFPV-RKARSSL 192
Query: 238 DQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
D V + G + YL LD L +FDP+LV+Y AG D+ D LG + +
Sbjct: 193 D--VPLADGIDDDGYLDALDRHLPQVLASFDPDLVLYQAGVDVHGDDRLGRINL 244
>gi|429220434|ref|YP_007182078.1| deacetylase [Deinococcus peraridilitoris DSM 19664]
gi|429131297|gb|AFZ68312.1| deacetylase, histone deacetylase/acetoin utilization protein
[Deinococcus peraridilitoris DSM 19664]
Length = 297
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 81/158 (51%), Gaps = 3/158 (1%)
Query: 134 RKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRV 193
R+ G T++A + A GW +N+ GG HH D GF D+ + + A + +SRV
Sbjct: 89 RRASGATVVALRDALRSGWGVNLSGGTHHAFFDRAEGFSLLNDVVIAVTLALREGWVSRV 148
Query: 194 MIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYL 253
I+DLD HQGNG + ++R Y L + YP E R +D + + G + +YL
Sbjct: 149 AIVDLDVHQGNGTASLLAREARAYTLSVHGERNYPFRKE-RSSLD--IALGDGVSDLQYL 205
Query: 254 KKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
LD + A F P+L++Y AG D+L GD G +
Sbjct: 206 HVLDTQVFPALDAFRPDLLVYLAGVDVLGGDRFGRFAL 243
>gi|148655721|ref|YP_001275926.1| histone deacetylase superfamily protein [Roseiflexus sp. RS-1]
gi|148567831|gb|ABQ89976.1| histone deacetylase superfamily [Roseiflexus sp. RS-1]
Length = 298
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 116/258 (44%), Gaps = 16/258 (6%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+ L YS D L + + H F +K+ + + S+EG + ++ P A D+L H
Sbjct: 1 MKLFYS---DTFVLPLPEGHRFPITKYAMLRERASAEGLGE---LIVPAAADDRDILRAH 54
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLA-KERGWA 153
+ YL +Q + P+ LV+R R+ VG TI A + A G A
Sbjct: 55 TADYLHRIQIGAMSDREMRQIGFPWSPH-LVERS-----RRSVGATIAACRTALSGDGIA 108
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSD 213
++ GG HH AD G G+C + D + + + RV+IID D HQGNG + D
Sbjct: 109 ASLAGGTHHAFADHGEGYCVFNDSVIAARVMQAEGRVRRVVIIDCDVHQGNGIAAILAGD 168
Query: 214 SRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVI 273
++ + YP E R +D +E GT YL L++ L A +L I
Sbjct: 169 ETIFSFSIHGAKNYPFRKE-RSNLDIALE--DGTGDAVYLAALEQGLYQAIEQSCADLAI 225
Query: 274 YNAGTDILEGDPLGMLKV 291
Y AG D E D LG LKV
Sbjct: 226 YLAGADPYEDDRLGRLKV 243
>gi|114563800|ref|YP_751313.1| histone deacetylase superfamily protein [Shewanella frigidimarina
NCIMB 400]
gi|114335093|gb|ABI72475.1| histone deacetylase superfamily [Shewanella frigidimarina NCIMB
400]
Length = 307
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 117/267 (43%), Gaps = 27/267 (10%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
+P +Y Y S L + H F ++K+ + Q + L + P SK+ L
Sbjct: 3 LSIPFVYHASY--SQLALPSTHRFPTTKYHNLYQHALKQQLLFEQYRHTPTPISKDTLYT 60
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQ--------VGGTILAA 144
VH Y++ + AL + QR++ +P+ ++ V GT L A
Sbjct: 61 VHCPQYVEQFING------------AL--DHKAQRRIGFPWSQELVTRTLHAVNGTRLCA 106
Query: 145 KLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
+LA + G A+++ GG+HH D G GFC + D+ + A +V+I D D HQG+
Sbjct: 107 ELALDHGIAVHLTGGYHHAHYDFGSGFCIFNDLVIAARSAIDSGRADKVLIFDCDVHQGD 166
Query: 205 GHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAG 264
G + + + +P ++ D + + G T +YL+ + + L
Sbjct: 167 GTATLTQGNPDIISCSIHCAQNFP---SRKQQSDHDIALDKGCTDKQYLEHIQQILPYLI 223
Query: 265 HTFDPELVIYNAGTDILEGDPLGMLKV 291
P+L+IY+AG DI + D LG +
Sbjct: 224 RIHQPDLIIYDAGVDIHQHDDLGYFSI 250
>gi|332184978|ref|ZP_08386727.1| histone deacetylase domain protein [Sphingomonas sp. S17]
gi|332014702|gb|EGI56758.1| histone deacetylase domain protein [Sphingomonas sp. S17]
Length = 307
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 108/226 (47%), Gaps = 16/226 (7%)
Query: 76 KNCIVEPLEASKEDLLVVHSE----SYLKSLQSSPNVSIIIE--VPPVAL----FPNCLV 125
I + L A ED++ E ++L+++ V+ ++E VPP FP V
Sbjct: 25 NGAIRDLLRARGEDIVWTEPELIPPAWLEAVHDPDYVAEVLEARVPPEKTRRIGFP---V 81
Query: 126 QRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAF 185
+V Y R GGT AA LA E G+A N GG HH AD G G+C + D+++
Sbjct: 82 TEQVAYRARAVPGGTWTAAMLALEHGFAANTAGGSHHALADTGAGYCVFNDLAVAAVRLV 141
Query: 186 VQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVS 245
+ +SR+ I+D D HQG+G + + + + +P +AR +D V +
Sbjct: 142 EEGIVSRIAIVDCDVHQGDGTAALTAGRADIVTYSIHAEKNFP-ARKARSTLD--VGLSD 198
Query: 246 GTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
G + YL++L+ L PEL++Y AG D GD LG L V
Sbjct: 199 GVDDDGYLERLETTLVPFLEEHTPELILYQAGVDPFAGDRLGRLAV 244
>gi|392422523|ref|YP_006459127.1| histone deacetylase family protein [Pseudomonas stutzeri CCUG
29243]
gi|390984711|gb|AFM34704.1| histone deacetylase family protein [Pseudomonas stutzeri CCUG
29243]
Length = 306
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 113/259 (43%), Gaps = 12/259 (4%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LPL+Y DY + H F K+ + L + G ++ P S++ L +
Sbjct: 1 MSLPLVYHDDYSPP---LPPGHRFPMEKFRLLRDHLVALGLTTDEALLRPELCSQDILAL 57
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
H+ Y+ S + + P L QR V + VGG++LAA+ A + G
Sbjct: 58 AHAPDYVTRYCSGEMSRDELRRLGLPWSPE-LAQRTV-----RAVGGSLLAAEQALQHGL 111
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
A ++ GG HH D GFC + D+++ Y + RV+I D D HQG+G + +
Sbjct: 112 ACHLAGGTHHAHHDHASGFCIFNDLAVIALYLLESGRVGRVLIFDCDVHQGDGTARILEN 171
Query: 213 DSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELV 272
+ + +P + D + + G YLK + + L + P+LV
Sbjct: 172 VPDAVTISLHCEKNFP---TRKAHSDWDIPLPPGMGDEAYLKVVHDTLNYLLPIYQPDLV 228
Query: 273 IYNAGTDILEGDPLGMLKV 291
+Y+AG D+ D LG+L +
Sbjct: 229 LYDAGVDVHRDDALGLLSL 247
>gi|343506193|ref|ZP_08743701.1| histone deacetylase/AcuC/AphA family protein [Vibrio ichthyoenteri
ATCC 700023]
gi|342803497|gb|EGU38848.1| histone deacetylase/AcuC/AphA family protein [Vibrio ichthyoenteri
ATCC 700023]
Length = 312
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 124/276 (44%), Gaps = 39/276 (14%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFL----------SSEGFLDKNCIVEPLE 84
+PLIY P Y S L + H + +K+ + Q + S +L+ +P
Sbjct: 2 IPLIYHPIY--SQLTLPAKHRYPINKYQLLFQAVEQKLHATSIASPAKWLNTFQFFKPCP 59
Query: 85 ASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV------- 137
S E + H Y+ +L S ++P + R++ +P+ +Q+
Sbjct: 60 LSPETVSRHHCPDYIDALLSG-------QLPAAKM-------RRIGFPWSEQLIERTLTS 105
Query: 138 -GGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMII 196
GGT L +LA + G AI++ GG+HH D G GFC D+++ A ++ RV+II
Sbjct: 106 AGGTWLTTQLALDYGVAIHLSGGYHHAHYDFGTGFCLINDLAMSAKQALSMDHVDRVLII 165
Query: 197 DLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARR-FIDQKVEVVSGTTTNEYLKK 255
D D H G+G + D R+ + +P AR+ D + + T E+L
Sbjct: 166 DSDVHHGDGTATMCADDERIITVSFHCDKNFP----ARKPHSDVDIALAKETGDAEFLDH 221
Query: 256 LDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+E A + + P+L++Y+AG DI D LG V
Sbjct: 222 FYSVVETAVNVYQPDLILYDAGVDIHCDDELGYFNV 257
>gi|262189882|ref|ZP_06048207.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae CT
5369-93]
gi|262034235|gb|EEY52650.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae CT
5369-93]
Length = 295
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 119/268 (44%), Gaps = 28/268 (10%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKW---GRICQFLSSEGFLDKNCIVEPLEASKEDLL 91
+PLIY P Y L + +P + + + Q SE + + P+ A +
Sbjct: 2 IPLIYHPIYSQLDLPVGHRYPINKYRLLYEEIVRQREQSEAWQARFEFHTPIAAELSRIT 61
Query: 92 VVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRK--------QVGGTILA 143
+H Y+++L PVA R++ +P+ K VGGT L
Sbjct: 62 PLHDPDYVQALLEG--------TLPVAKM------RRIGFPWSKTLIERTLHSVGGTCLT 107
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQG 203
+ A + G AI++ GG+HH AD G GFC + D+++ H+A ++ +V+IID D H G
Sbjct: 108 VEQALQSGVAIHLSGGYHHAHADFGSGFCLFNDLAIAAHFALSLPSVDKVLIIDSDVHHG 167
Query: 204 NGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVA 263
+G + + L +P A V + T E+L + +E+A
Sbjct: 168 DGTATLCAECDDIITLSFHCDKNFPARKPASSM---DVGFANQTGDEEFLSTFIQVVEMA 224
Query: 264 GHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ P+L++Y+AG DI D LG L +
Sbjct: 225 VNLHRPDLILYDAGVDIHNDDELGYLSI 252
>gi|427724084|ref|YP_007071361.1| histone deacetylase [Leptolyngbya sp. PCC 7376]
gi|427355804|gb|AFY38527.1| Histone deacetylase [Leptolyngbya sp. PCC 7376]
Length = 300
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 114/265 (43%), Gaps = 28/265 (10%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
P+IY P+Y I + H F K+ R+ + L + + + EP + L +VH
Sbjct: 3 FPVIYHPNY---VTPIPEEHRFPMPKFKRLYEMLLRDDVIRSEQVYEPEFPEMDWLELVH 59
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTILAAKL 146
+Y+ + ++ + QR++ P+ K V GGT+ AKL
Sbjct: 60 DRNYIDAYRNGT--------------LDKKAQRRIGLPWSKGVVTRTLTAIGGTVTTAKL 105
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
A E G A N GG HH G GFC D+++ +++IIDLD HQG+G
Sbjct: 106 ALEHGLACNTAGGTHHAFPTYGSGFCILNDLAIAAKTVRHLGLAKKILIIDLDVHQGDGT 165
Query: 207 EKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHT 266
F + VY M +P + F + + +G + YL+ L L+
Sbjct: 166 AFIFQDEPDVYTFSMHCEINFPSKKQNSNF---DIPLPAGLDDDGYLQILANHLDDLLSA 222
Query: 267 FDPELVIYNAGTDILEGDPLGMLKV 291
P+LV ++AG D GD LG L +
Sbjct: 223 VKPDLVFFDAGVDTHVGDRLGKLAM 247
>gi|358444918|ref|ZP_09155534.1| putative acetoin utilization protein AcuC [Corynebacterium casei
UCMA 3821]
gi|356609149|emb|CCE53754.1| putative acetoin utilization protein AcuC [Corynebacterium casei
UCMA 3821]
Length = 372
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 109/271 (40%), Gaps = 30/271 (11%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
KL LI + + LG E HP + G LD I +P A+ E L +
Sbjct: 1 MKLALIDTDEIHNYSLGTE--HPMGPDRVDAALALSQQLGILDAFQISQPNVATDEILEL 58
Query: 93 VHSESYLKSLQSS-PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
VHS++Y+++ +++ PN I + P V G I L R
Sbjct: 59 VHSKAYIQATRTNHPNPKFGIGTTDNPVVPGL-----------SDVAGRISRGTLDATRA 107
Query: 152 -W------AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
W A+N+ GG HH D GFC Y D ++ I + NI RV ID DAH G+
Sbjct: 108 VWEGTADRAVNLAGGLHHAFPDSMSGFCMYNDAAIAITWLLENTNIERVAYIDFDAHHGD 167
Query: 205 GHEKDFSSDSRVYILDMFNPGIY--PRDYEARRFIDQ-------KVEVVSGTTTNEYLKK 255
G EK F D RV + + G+Y P A + V +E+L+
Sbjct: 168 GVEKFFWDDPRVLTISVHESGLYLFPGTGHAHEIGGSNAAGTAINIAVSKNAADHEWLQS 227
Query: 256 LDEALEVAGHTFDPELVIYNAGTDILEGDPL 286
+ + F PEL+I G D DPL
Sbjct: 228 IHAVVPAVLQKFAPELIISQHGADPHRDDPL 258
>gi|421615856|ref|ZP_16056875.1| histone deacetylase family protein [Pseudomonas stutzeri KOS6]
gi|409782038|gb|EKN61605.1| histone deacetylase family protein [Pseudomonas stutzeri KOS6]
Length = 306
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 114/259 (44%), Gaps = 12/259 (4%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LPL++ DY + H F K+ + L + G ++ P S++ L +
Sbjct: 1 MSLPLVFHDDYSPP---LPPGHRFPMEKFRLLRDHLVALGMTTDAALLRPQMCSRDILAL 57
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
H Y++ S + + P L QR V + VGG++LAA+ A + G
Sbjct: 58 AHDRDYVERYCSGEMGRDELRRLGLPWSPE-LAQRTV-----RAVGGSLLAAEQALQHGL 111
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
A ++ GG HH D GFC + D+++ Y + RV+I D D HQG+G + +
Sbjct: 112 ACHLAGGTHHAHRDHASGFCIFNDLAVIALYLLESGRVGRVLIFDCDVHQGDGTARILEN 171
Query: 213 DSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELV 272
+ + +P + D + + G + YLK + + L + P+LV
Sbjct: 172 VPDAVTVSLHCEKNFP---TRKAHSDWDIPLPPGMDDDAYLKVVHDTLNYLLPIYQPDLV 228
Query: 273 IYNAGTDILEGDPLGMLKV 291
+Y+AG D+ D LG+L +
Sbjct: 229 LYDAGVDVHRDDALGLLSL 247
>gi|187608485|ref|NP_001120462.1| histone deacetylase 8 [Xenopus (Silurana) tropicalis]
gi|269969357|sp|B1H369.1|HDAC8_XENTR RecName: Full=Histone deacetylase 8; Short=HD8
gi|170284669|gb|AAI61282.1| LOC100145561 protein [Xenopus (Silurana) tropicalis]
Length = 369
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 109/234 (46%), Gaps = 17/234 (7%)
Query: 67 FLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQ--SSPNVSIIIEVPPVALFPNCL 124
+ + G L + +V+P AS E++ H++SYL+ L S + E L +C
Sbjct: 36 LIEAYGLLKEMRVVKPKVASMEEMAAFHTDSYLQHLHKVSEEGDNDDPETLEYGLGYDCP 95
Query: 125 VQRKVLYPFRKQVGGTILAAK---LAKERGWAINVGGGFHHCSADEGGGFCAYADISLCI 181
+ + Y + VGG L A +A + AIN GG+HH DE GFC D L I
Sbjct: 96 ITEGI-YDYAAAVGGATLTAAEQLMAGKTRIAINWPGGWHHAKKDEASGFCYLNDAVLGI 154
Query: 182 HYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDM--FNPGIYPRDYEAR----- 234
++ RV+ +D+D H G+G E FS S+V + + F+PG +P +
Sbjct: 155 --LKLREKFDRVLYVDMDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDIGLG 212
Query: 235 --RFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPL 286
R+ V + G +Y + + L+ TF+PE V+ G D + GDP+
Sbjct: 213 KGRYYSVNVPLQDGIQDEKYYQICEGVLKEVFTTFNPEAVVLQLGADTIAGDPM 266
>gi|85709385|ref|ZP_01040450.1| hypothetical protein NAP1_10908 [Erythrobacter sp. NAP1]
gi|85688095|gb|EAQ28099.1| hypothetical protein NAP1_10908 [Erythrobacter sp. NAP1]
Length = 312
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 90/174 (51%), Gaps = 11/174 (6%)
Query: 126 QRKVLYPFRKQV--------GGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADI 177
+R++ +P + + GGT LAA+LA E G+A N G HH D G G+C + D+
Sbjct: 74 ERRIGFPVTEHIRDRVRHTNGGTWLAAQLAMEHGYAANSAAGSHHALGDTGAGYCVFNDL 133
Query: 178 SLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFI 237
++ + Q + +RV+I+DLD HQG+G + V+ L + +P +AR +
Sbjct: 134 AVATNRLLAQGDAARVLIVDLDVHQGDGTASLLAGREDVFTLSVHAEKNFPV-RKARSTL 192
Query: 238 DQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
D + + GT + Y++ LD+ L +F P+ V Y AG D D LG L +
Sbjct: 193 D--IGLPDGTDDDGYMEALDKHLPRVIDSFAPDFVFYQAGVDPHVEDKLGRLAL 244
>gi|383643074|ref|ZP_09955480.1| histone deacetylase superfamily protein [Sphingomonas elodea ATCC
31461]
Length = 313
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 118/265 (44%), Gaps = 30/265 (11%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+P+++ PDY + +K G + L +EG + P + L VH
Sbjct: 2 IPVVHHPDY---VAPAPAGSAYLWNKNGLVRDLLQAEGA--RVTWHAPEAMPRRWLEAVH 56
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTILAAKL 146
Y+ + + EVPP R++ +P V GGT LAA+L
Sbjct: 57 DPDYVGEV-------LAAEVPPHK-------TRRIGFPVTPAVARRSERVPGGTFLAARL 102
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
A+ G+A N GG HH AD G G+C + D+++ + + +RV+I+D D HQG+G
Sbjct: 103 AQREGFAANSAGGSHHALADTGAGYCVFNDLAIAAVRLVEEGHAARVLIVDCDVHQGDGT 162
Query: 207 EKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHT 266
+ + + +P +AR +D V + GT EYL+ L+ L
Sbjct: 163 AALTAGRPEIATYSIHAEKNFPV-RKARSTLD--VGLPDGTGDAEYLETLEATLVPLLTG 219
Query: 267 FDPELVIYNAGTDILEGDPLGMLKV 291
FDP+LV+Y AG D D LG L +
Sbjct: 220 FDPDLVLYQAGVDPFAEDRLGRLGL 244
>gi|442609735|ref|ZP_21024469.1| Deacetylases, including yeast histone deacetylase and acetoin
utilization protein [Pseudoalteromonas luteoviolacea B =
ATCC 29581]
gi|441748751|emb|CCQ10531.1| Deacetylases, including yeast histone deacetylase and acetoin
utilization protein [Pseudoalteromonas luteoviolacea B =
ATCC 29581]
Length = 307
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 116/267 (43%), Gaps = 29/267 (10%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPL+Y +Y SF + H F SK+ + + G + N + +P + L VH
Sbjct: 12 LPLVYHSNYSFSF---DPNHRFVMSKFANLYAEVKKMGLVGNN-LYQPELGAPSRLETVH 67
Query: 95 SESYLKSL-------QSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLA 147
E+YL L ++ + + VP L+ R P GT+ A+LA
Sbjct: 68 CENYLWDLWHDRLDDKAMRRIGLPWSVP--------LMARTFTAPL-----GTLKTAELA 114
Query: 148 KERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHE 207
G A ++ GG HH D G GFC D++ H + V+I DLD HQG+G
Sbjct: 115 LNHGIACHLAGGTHHAHYDFGSGFCMVNDLAFTAHELINAGKVHNVLIFDLDVHQGDGTA 174
Query: 208 KDFSSDSRVYILDMFNPGIYP-RDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHT 266
+ ++ + +P R + D + + + EYL + E LE
Sbjct: 175 AMCQHNPYIFTCSIHCEKNFPFRKVSS----DLDIGLPNHIQDAEYLAIVHETLEGLLQD 230
Query: 267 FDPELVIYNAGTDILEGDPLGMLKVKW 293
+P++V+Y+AG D+ E D LG L + W
Sbjct: 231 VNPDIVLYDAGVDVWEHDGLGKLDITW 257
>gi|417825291|ref|ZP_12471879.1| histone deacetylase domain protein [Vibrio cholerae HE48]
gi|340046776|gb|EGR07706.1| histone deacetylase domain protein [Vibrio cholerae HE48]
Length = 306
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 119/268 (44%), Gaps = 28/268 (10%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKW---GRICQFLSSEGFLDKNCIVEPLEASKEDLL 91
+PLIY P Y L + +P + + + Q SE + + P+ A +
Sbjct: 2 IPLIYHPIYSQLDLPVGHRYPINKYRLLYEEIVRQREQSEAWQARFEFHTPIAAELSRIT 61
Query: 92 VVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRK--------QVGGTILA 143
+H Y+++L PVA R++ +P+ K VGGT L
Sbjct: 62 PLHDPDYVQALLEG--------TLPVAKM------RRIGFPWSKTLIERTLHSVGGTCLT 107
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQG 203
+ A + G AI++ GG+HH AD G GFC + D+++ H+A ++ +V+IID D H G
Sbjct: 108 VEQALQSGVAIHLSGGYHHAHADFGSGFCLFNDLAIAAHFALSLPSVDKVLIIDSDVHHG 167
Query: 204 NGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVA 263
+G + + L +P A V + T E+L + +E+A
Sbjct: 168 DGTATLCAECDDIITLSFHCDKNFPARKPASSM---DVGFANQTGDEEFLSTFIQVVEMA 224
Query: 264 GHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ P+L++Y+AG DI D LG L +
Sbjct: 225 VNLHRPDLILYDAGVDIHNDDELGYLSI 252
>gi|330504953|ref|YP_004381822.1| histone deacetylase superfamily protein [Pseudomonas mendocina
NK-01]
gi|328919239|gb|AEB60070.1| histone deacetylase superfamily protein [Pseudomonas mendocina
NK-01]
Length = 306
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 115/258 (44%), Gaps = 14/258 (5%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPL+Y DY F H F K+ + L G + P E L +VH
Sbjct: 3 LPLVYHEDYSPPF---PTGHRFPMEKFRLLRDHLIDSGLTSDAELQRPELCPAEVLALVH 59
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAI 154
Y+ + +S + + L +R V + VGG++L A+LA G A
Sbjct: 60 CPDYIARYMAG-ELSYEDQRRLGLPWSEALARRTV-----RAVGGSLLTAELALRHGLAC 113
Query: 155 NVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDS 214
++ GG HH D GFC + D+++ Y + RV+I D D HQG+G + ++
Sbjct: 114 HLAGGTHHAHYDFPSGFCIFNDLAVIARYLLETGRVHRVLIFDCDVHQGDGTARLLENEP 173
Query: 215 RVYILDMFNPGIYPRDYEARRF-IDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVI 273
+ + +P AR+ D + + G +YLK +D+ L + P+LV+
Sbjct: 174 DAITVSLHCEQNFP----ARKAQSDWDIPLPRGMGDADYLKVVDDTLNYLLPIYQPDLVL 229
Query: 274 YNAGTDILEGDPLGMLKV 291
Y+AG D+ + D LG L++
Sbjct: 230 YDAGVDVHQDDALGYLQL 247
>gi|153217599|ref|ZP_01951280.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae 1587]
gi|153803619|ref|ZP_01958205.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae
MZO-3]
gi|124113455|gb|EAY32275.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae 1587]
gi|124120845|gb|EAY39588.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae
MZO-3]
Length = 306
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 119/268 (44%), Gaps = 28/268 (10%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKW---GRICQFLSSEGFLDKNCIVEPLEASKEDLL 91
+PLIY P Y L + +P + + + Q SE + + P+ A +
Sbjct: 2 IPLIYHPIYSQLDLPVGHRYPINKYRLLYEEIVRQREQSEAWQARFEFHTPIAAELSRIT 61
Query: 92 VVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRK--------QVGGTILA 143
+H Y+++L PVA R++ +P+ K VGGT L
Sbjct: 62 PLHDPDYVQALLEG--------TLPVAKM------RRIGFPWSKTLIERTLHSVGGTCLT 107
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQG 203
+ A + G AI++ GG+HH AD G GFC + D+++ H+A ++ +V+IID D H G
Sbjct: 108 VEQALQSGVAIHLSGGYHHAHADFGSGFCLFNDLAIAAHFALSLPSVDKVLIIDSDVHHG 167
Query: 204 NGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVA 263
+G + + L +P A V + T E+L + +E+A
Sbjct: 168 DGTATLCAECDDIITLSFHCDKNFPARKPASSM---DVGFANQTGDEEFLSTFIQVVEMA 224
Query: 264 GHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ P+L++Y+AG DI D LG L +
Sbjct: 225 VNLHRPDLILYDAGVDIHNDDELGYLSI 252
>gi|255081060|ref|XP_002504096.1| histone deacetylase [Micromonas sp. RCC299]
gi|226519363|gb|ACO65354.1| histone deacetylase [Micromonas sp. RCC299]
Length = 805
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 95/219 (43%), Gaps = 17/219 (7%)
Query: 83 LEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTIL 142
L+AS D+L VH E Y+ + + V R + GGT+
Sbjct: 109 LKASLIDVLAVHEEGYVTRVLGCALTEKEGRAIGFPMMNPSQVTRSLA-----STGGTVA 163
Query: 143 AAKLAKERGW----AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNIS------R 192
A G A + GG HH D+G GFC + DI++ A +
Sbjct: 164 ATHDVLRPGTTAKCAAQIAGGTHHAFRDKGEGFCVFNDIAVAATMALRKYPARFEGCAHP 223
Query: 193 VMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEY 252
+++IDLD HQGNG K F D RV G YP ++ + D V+V GT EY
Sbjct: 224 ILVIDLDVHQGNGTAKIFEDDPRVITFSAHGAGNYP--WKTKMRSDHDVDVPDGTGDKEY 281
Query: 253 LKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ L+E L T+DP+LV + AG D L D G LK+
Sbjct: 282 IAMLEEWLPRLFETYDPKLVYFQAGVDALAVDSFGKLKM 320
>gi|390445539|ref|ZP_10233279.1| histone deacetylase superfamily protein [Nitritalea halalkaliphila
LW7]
gi|389661825|gb|EIM73419.1| histone deacetylase superfamily protein [Nitritalea halalkaliphila
LW7]
Length = 300
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 104/238 (43%), Gaps = 13/238 (5%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ + + L EG L + P + + +L H SY L+ +S+
Sbjct: 18 HRFPMEKYELLPEQLLYEGTLRPSNFFSPEALADDWILKAHDPSYFNRLK---GLSLSKS 74
Query: 114 VPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGF 171
FP LV R+V + G++ AA AKE G A+N+ GG HH D G GF
Sbjct: 75 EIRRTGFPLSQQLVDREV-----HIMHGSVQAALYAKEFGIAMNIAGGTHHAFKDRGEGF 129
Query: 172 CAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDY 231
C D+++ Y + +++IIDLD HQGNG F+ V+ M YP
Sbjct: 130 CLLNDLAITAFYLLEKKLARKILIIDLDVHQGNGTAAIFAEVPEVFTFSMHGEANYPMHK 189
Query: 232 EARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGML 289
E D + + T YL L E L +P+ ++Y G D+L D LG L
Sbjct: 190 EKS---DLDIGLKDKTDDATYLSLLRETLPRLIDAEEPDFLLYQCGVDVLASDKLGRL 244
>gi|262166159|ref|ZP_06033896.1| histone deacetylase/AcuC/AphA family protein [Vibrio mimicus VM223]
gi|262025875|gb|EEY44543.1| histone deacetylase/AcuC/AphA family protein [Vibrio mimicus VM223]
Length = 306
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 117/266 (43%), Gaps = 24/266 (9%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKW---GRICQFLSSEGFLDKNCIVEPLEASKEDLL 91
+PLIY P Y L + +P + + + Q SE + + P A +
Sbjct: 2 IPLIYHPIYSQLDLPVGHRYPINKYRLLYEDIVRQQAQSEEWREAFGFFTPQTAELSLVE 61
Query: 92 VVHSESYLKSLQSSPNVSIIIEVPPVAL----FP--NCLVQRKVLYPFRKQVGGTILAAK 145
+H Y+++L +P + FP L++R +L VGGT L +
Sbjct: 62 SLHDSEYVQALLDGA-------LPAAKMRRIGFPWSEKLIERTLL-----SVGGTCLTVE 109
Query: 146 LAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A AI++ GG+HH AD G GFC + D+++ H+A + +V+IID D H G+G
Sbjct: 110 RALLSDVAIHLSGGYHHAHADFGSGFCLFNDLAIAAHFALSLSGVDKVLIIDSDVHHGDG 169
Query: 206 HEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGH 265
+ + L +P A D +E T E+L + +E+A +
Sbjct: 170 TATLCAECDEIITLSFHCDKNFPARKPAS---DMDIEFTKQTGDEEFLSTFTQVVEMAVN 226
Query: 266 TFDPELVIYNAGTDILEGDPLGMLKV 291
P+L+IY+AG DI D LG L +
Sbjct: 227 LHQPDLIIYDAGVDIHSDDELGYLSI 252
>gi|381401553|ref|ZP_09926451.1| histone deacetylase superfamily protein [Kingella kingae PYKK081]
gi|380833407|gb|EIC13277.1| histone deacetylase superfamily protein [Kingella kingae PYKK081]
Length = 380
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 107/257 (41%), Gaps = 7/257 (2%)
Query: 38 IYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSES 97
IYSPD F G LHP + I L + G +E E S L VH+
Sbjct: 73 IYSPDCQAHFAG--SLHPESPERTNVIAHALKNSGLWILLQKIEAPEVSDIQLARVHTRR 130
Query: 98 YLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVG 157
YL SL+S + +++ +Q ++ K AK A+
Sbjct: 131 YLSSLESQVPQTGSVKINEDTFLSRDSLQAARKAAGAAVKAVDLVMTKQAKNAFCAVRPP 190
Query: 158 GGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVY 217
G HH AD+ GFC +I++ +A + + RV I+D D H G+G E F D+RV
Sbjct: 191 G--HHAHADKASGFCFINNIAVAAMHAIAEYRLERVAILDFDLHHGDGTEDIFRDDNRVM 248
Query: 218 ILDMFNPGIYP---RDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIY 274
+L F +YP +Y + +G +N + + + F P+L++
Sbjct: 249 LLSTFEHPLYPFCGTEYTGSNPNIANTPLKAGDGSNAFRDAVRQVWLPKLEQFQPQLILL 308
Query: 275 NAGTDILEGDPLGMLKV 291
+AG D DPLG L +
Sbjct: 309 SAGFDAHRDDPLGHLNL 325
>gi|121604519|ref|YP_981848.1| histone deacetylase superfamily protein [Polaromonas
naphthalenivorans CJ2]
gi|120593488|gb|ABM36927.1| histone deacetylase superfamily [Polaromonas naphthalenivorans CJ2]
Length = 333
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 121/263 (46%), Gaps = 46/263 (17%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ + + L SE L +++ AS +L +VH+ +Y++++ +
Sbjct: 32 HRFPMRKYKLLRERLVSE--LPAVRMMQAPAASDGELALVHAPAYIQAITHG-----TLP 84
Query: 114 VPPVALFPNCLVQRKVLYPF--------RKQVGGTILAAKL-------AKERGWAINVGG 158
P QR++ +P+ R+ G T+ AA+ ++ G A N+ G
Sbjct: 85 AP---------AQREIGFPWSEGMAERARRSAGATVAAARRALGLAPGSRPEGIAANLAG 135
Query: 159 GFHHCSADEGGGFCAYADISLCIHYAFVQLNISR----------VMIIDLDAHQGNGHEK 208
G HH A +GGGFC + D ++ +Q +R V +IDLD HQGNG
Sbjct: 136 GTHHAYAHKGGGFCVFNDAAVAAR--LMQAEWARQHRQARQPLQVAVIDLDVHQGNGTAS 193
Query: 209 DFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFD 268
F+ D+ V+ L + +P EA D VE+ G YL+ L+ AL+ F+
Sbjct: 194 IFAGDASVFTLSLHGEKNFPFRKEAS---DLDVELPDGCLDAPYLQALEHALDELERRFE 250
Query: 269 PELVIYNAGTDILEGDPLGMLKV 291
P LV++ AG D GD LG L +
Sbjct: 251 PGLVLFLAGADPFAGDRLGRLSL 273
>gi|388547860|ref|ZP_10151119.1| putative histone deacetylase family protein [Pseudomonas sp. M47T1]
gi|388274018|gb|EIK93621.1| putative histone deacetylase family protein [Pseudomonas sp. M47T1]
Length = 305
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 116/261 (44%), Gaps = 20/261 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G ++ P + L + H
Sbjct: 3 LPLIYHDDYSPQF---PPEHRFPMDKFRLLRDHLVDSGLTRDADLLRPAVCPADTLALAH 59
Query: 95 SESYLKSLQSSP---NVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
Y++ S + +P + L +R V + VGG++LAA+ A + G
Sbjct: 60 DRDYIERFMSGQLGREDQRRLGLP----WSEALARRTV-----RAVGGSLLAAEQALQHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A ++ GG HH D GFC + D+++ Y + V+I D D HQG+G + +
Sbjct: 111 LACHLAGGTHHAHYDHPAGFCIFNDLAIISRYLLASGRVGSVLIFDCDVHQGDGTARILA 170
Query: 212 SDSRVYILDMFNPGIYPRDYEARRF-IDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPE 270
+ + + +P AR+ D + + G +YL+ +D+ L + P+
Sbjct: 171 NTPDAITVSLHCEKNFP----ARKADSDWDIPLPMGMGDADYLQVVDDTLNYLLPLYKPD 226
Query: 271 LVIYNAGTDILEGDPLGMLKV 291
LV+Y+AG D+ + D LG L++
Sbjct: 227 LVLYDAGVDVHKDDALGYLQL 247
>gi|82705211|ref|XP_726876.1| histone deacetylase [Plasmodium yoelii yoelii 17XNL]
gi|23482464|gb|EAA18441.1| histone deacetylase/AcuC/AphA family protein, putative [Plasmodium
yoelii yoelii]
Length = 461
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 131/267 (49%), Gaps = 26/267 (9%)
Query: 36 PLIYSPDYDISFLGIEK------LHPFDSSKWGRICQFLSS--EGFLDKNCIVEPLEASK 87
P ++ P Y + + K H F +K+ I +L+ E + N I+ + SK
Sbjct: 146 PYVFHPIYSNAERKVNKSNRHIQTHRFKINKYENIFNYLNKREECIYENNYIIPSCDISK 205
Query: 88 --EDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK 145
+ L +HS +++ + + + I++ + LF + L+ R ++ ++ GTIL++
Sbjct: 206 IKKSLFSIHSTNFINKMFNIIKNNEEIKLYELNLFSD-LIARYLI-----EINGTILSSL 259
Query: 146 LAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
LA + +++GGG HH D+G GFC + DI++ + + + V+I+D+D HQG+G
Sbjct: 260 LALKHSMCMHIGGGNHHSKRDKGDGFCIFNDIAIAVDFLLFYKIVKNVIILDVDVHQGDG 319
Query: 206 HEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGH 265
+ F + V + + YP + + ID +E+ S NEYLK L +
Sbjct: 320 TAEIFQNHQNVKTISLHCKNNYPF-LKKKSTID--IELNSYMEDNEYLKIYQNIL----N 372
Query: 266 TFDPE---LVIYNAGTDILEGDPLGML 289
P+ ++ Y AG DI + D LG+L
Sbjct: 373 NIKPQKNSIIFYLAGVDISKDDELGLL 399
>gi|443243613|ref|YP_007376838.1| deacetylase [Nonlabens dokdonensis DSW-6]
gi|442801012|gb|AGC76817.1| deacetylase [Nonlabens dokdonensis DSW-6]
Length = 307
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 104/247 (42%), Gaps = 26/247 (10%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKE-DLLVVHSESYLKSLQSSPNVSIII 112
H F K+ + Q L EG + EP + E D+L VH++ YL+ L+
Sbjct: 18 HRFPMLKYELLPQQLLHEGTAIETDFFEPSKLCNEVDVLRVHTDQYLEDLKE-------- 69
Query: 113 EVPPVALFPNCLVQRKVLYPFRKQV--------GGTILAAKLAKERGWAINVGGGFHHCS 164
L + RK+ +P Q+ GTI A + A+NV GG HH
Sbjct: 70 ------LTLDKRAARKLGFPLSAQLVERELRIAQGTIEGCLKAYDHRVAMNVAGGTHHAY 123
Query: 165 ADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNP 224
D G FC D ++ Y +V+I+DLD HQGNG + F +D V+ M
Sbjct: 124 TDHGEAFCLLNDQAIAARYLQHHGLAEKVLIVDLDVHQGNGTAEIFQNDDSVFTFSMHGA 183
Query: 225 GIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGD 284
G YP E D + + G + YL +L L P+ + Y G D+LE D
Sbjct: 184 GNYPFKKEQS---DLDIAIPDGYEDDYYLSELKNTLPDLIAQEQPDFIFYLCGVDVLESD 240
Query: 285 PLGMLKV 291
LG L +
Sbjct: 241 KLGKLSM 247
>gi|375148298|ref|YP_005010739.1| histone deacetylase [Niastella koreensis GR20-10]
gi|361062344|gb|AEW01336.1| Histone deacetylase [Niastella koreensis GR20-10]
Length = 307
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 100/246 (40%), Gaps = 25/246 (10%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ I + L EG + + + P E +L H E+Y++ LQ
Sbjct: 24 HRFPMLKYELIPEQLLYEGTITSHNLFAPAACDDEIVLWTHDEAYVQKLQQQT------- 76
Query: 114 VPPVALFPNCLVQRKVLYPFRKQVG--------GTILAAKLAKERGWAINVGGGFHHCSA 165
+ QR + +P Q+ GTI A E G A+NV GG HH
Sbjct: 77 -------LSAREQRHIGFPQSPQLTRREFVIAQGTIDCCDYAFEHGVALNVAGGTHHAFT 129
Query: 166 DEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
D G GFC D + +Y + R++IIDLD HQGNG F + RV+ M
Sbjct: 130 DRGEGFCLLNDFGVAANYLLKKELARRIIIIDLDVHQGNGTASIFEHEPRVFTFSMHGAH 189
Query: 226 IYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDP 285
YP E D + + GT YL L L P+ Y +G DIL D
Sbjct: 190 NYPFHKEKS---DLDIALNDGTEDGLYLSLLQSNLLTLLDQIKPDFAFYLSGVDILSTDK 246
Query: 286 LGMLKV 291
G LKV
Sbjct: 247 FGKLKV 252
>gi|229513698|ref|ZP_04403160.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae TMA
21]
gi|229348879|gb|EEO13836.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae TMA
21]
Length = 306
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 118/268 (44%), Gaps = 28/268 (10%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKW---GRICQFLSSEGFLDKNCIVEPLEASKEDLL 91
+PLIY P Y L + +P + + + Q SE + P+ A +
Sbjct: 2 IPLIYHPIYSQLDLPVGHRYPINKYRLLYEEIVRQREQSEAWQASFEFHTPIAAELSRIT 61
Query: 92 VVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRK--------QVGGTILA 143
+H Y+++L PVA R++ +P+ K VGGT L
Sbjct: 62 RLHDPDYVQALLEG--------TLPVAKM------RRIGFPWSKPLIERTLYSVGGTCLT 107
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQG 203
+ A + G AI++ GG+HH AD G GFC + D+++ H+A ++ +V+IID D H G
Sbjct: 108 VEQALQSGVAIHLSGGYHHAHADFGSGFCLFNDLAIAAHFALSLPSVDKVLIIDSDVHHG 167
Query: 204 NGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVA 263
+G + + L +P A V + T E+L + +E+A
Sbjct: 168 DGTATLCAERDDIITLSFHCDKNFPARKPASSM---DVGFANQTGDEEFLSTFIQVVEMA 224
Query: 264 GHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ P+L++Y+AG DI D LG L +
Sbjct: 225 VNLHRPDLILYDAGVDIHNDDELGYLSI 252
>gi|325672689|ref|ZP_08152385.1| acetoin dehydrogenase AcuC [Rhodococcus equi ATCC 33707]
gi|325556566|gb|EGD26232.1| acetoin dehydrogenase AcuC [Rhodococcus equi ATCC 33707]
Length = 405
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 126/277 (45%), Gaps = 31/277 (11%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
+++SPDY +S+ + HP + ++ G +D +V P AS DLL +H+
Sbjct: 1 MVWSPDY-LSYRWSPQ-HPMNPTRLDLTMALADGLGLIDAAEVVRPDAASDADLLRIHTP 58
Query: 97 SYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKV------LYPFRKQV-----GGTILAAK 145
+Y+ + V + + P AL P + + ++P + GG++ AAK
Sbjct: 59 AYIDA------VKLAGDGPDTALPPELETRHGLGTDDNPIFPRMHEASAVLAGGSLAAAK 112
Query: 146 -LAKERGW-AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQG 203
+A R A+++GGG HH AD GFC Y D ++ I + + R+ +D+DAH G
Sbjct: 113 EIASGRARRAVSIGGGMHHAMADWASGFCVYNDAAIAISW-LLDNGFDRIAYVDIDAHHG 171
Query: 204 NGHEKDFSSDSRVYILDMF-NPG-IYPRDYEARRFIDQKVE-------VVSGTTTNEYLK 254
+G + F D RV + + +P ++P + E V+ GT+ +L+
Sbjct: 172 DGVQHAFLGDPRVMTISIHQHPATLWPNTGWSSEVGSGAAEGTAINLPVLPGTSDALWLR 231
Query: 255 KLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ A F P++VI G D DPL L +
Sbjct: 232 GFHAVVPAAIAGFRPQIVISQCGADNHREDPLADLAL 268
>gi|291296879|ref|YP_003508277.1| histone deacetylase superfamily protein [Meiothermus ruber DSM
1279]
gi|290471838|gb|ADD29257.1| histone deacetylase superfamily [Meiothermus ruber DSM 1279]
Length = 296
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 111/240 (46%), Gaps = 23/240 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEA-SKEDLLVVHSESYLKSLQS---SPNVS 109
HPF K+ + + L E LD ++P A + E L + H+ YL+ L+S S S
Sbjct: 18 HPFPKYKYAGVAEALRGE--LD----IQPAPAIAWETLALAHTPDYLQKLRSEGLSRQES 71
Query: 110 IIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGG 169
+ +P + L+ R + GGT+ A A + G +N+ GG HH
Sbjct: 72 HKVGLP----WSQSLLTRAL-----HAAGGTLAATLDALQTGLGLNLAGGTHHAYPGRAE 122
Query: 170 GFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPR 229
G+C + D+++ I Y Q RV+++DLDAHQGNG F +D V+ L + YP
Sbjct: 123 GYCLFNDVAVAIAYLRAQGWNGRVLVVDLDAHQGNGTAAFFRNDPTVFTLSVHAERNYPL 182
Query: 230 DYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGML 289
E D V + T + + EA T P+LV YNAG D+L+ D G L
Sbjct: 183 KKEPG---DLNVGLAD-ATNDAAYLEALEAALEQAFTHRPDLVFYNAGVDVLQNDRFGRL 238
>gi|83745862|ref|ZP_00942919.1| Deacetylase [Ralstonia solanacearum UW551]
gi|83727552|gb|EAP74673.1| Deacetylase [Ralstonia solanacearum UW551]
Length = 324
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 103/220 (46%), Gaps = 23/220 (10%)
Query: 81 EPLEASKEDLLVVHSESYLKSLQSS---PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV 137
E A + LL+ H+ Y+ ++ + P I P + +V+R R+
Sbjct: 44 EAPRAGDDALLLAHAPDYIDAVGAGKLDPARQREIGFP----WSPAMVERS-----RRSA 94
Query: 138 GGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISR----- 192
G T+ A + A G A+N+ GG HH AD+GGGFC + D ++ + +Q R
Sbjct: 95 GATMAACEAAMADGIAVNLAGGTHHAYADKGGGFCVFNDAAIAARW--MQRRPGRAPGDF 152
Query: 193 -VMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNE 251
V I+DLD HQGNG D+ V+ L + YP EA D V + G
Sbjct: 153 PVAIVDLDVHQGNGTASILRDDASVFTLSVHGEKNYPFRKEAS---DLDVGLPDGCGDAA 209
Query: 252 YLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
YL+ L AL+ F P L+IY AG D EGD LG LK+
Sbjct: 210 YLEALAGALDALAARFAPRLIIYLAGADPHEGDRLGRLKL 249
>gi|207742992|ref|YP_002259384.1| hypothetical protein RSIPO_01159 [Ralstonia solanacearum IPO1609]
gi|206594389|emb|CAQ61316.1| conserved hypothetical protein [Ralstonia solanacearum IPO1609]
Length = 302
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 103/220 (46%), Gaps = 23/220 (10%)
Query: 81 EPLEASKEDLLVVHSESYLKSLQSS---PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV 137
E A + LL+ H+ Y+ ++ + P I P + +V+R R+
Sbjct: 22 EAPRAGDDALLLAHAPDYIDAVGAGKLDPARQREIGFP----WSPAMVERS-----RRSA 72
Query: 138 GGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISR----- 192
G T+ A + A G A+N+ GG HH AD+GGGFC + D ++ + +Q R
Sbjct: 73 GATMAACEAAMADGIAVNLAGGTHHAYADKGGGFCVFNDAAIAARW--MQRRPGRAPGDF 130
Query: 193 -VMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNE 251
V I+DLD HQGNG D+ V+ L + YP EA D V + G
Sbjct: 131 PVAIVDLDVHQGNGTASILRDDASVFTLSVHGEKNYPFRKEAS---DLDVGLPDGCGDAA 187
Query: 252 YLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
YL+ L AL+ F P L+IY AG D EGD LG LK+
Sbjct: 188 YLEALAGALDALAARFAPRLIIYLAGADPHEGDRLGRLKL 227
>gi|312139422|ref|YP_004006758.1| histone deacetylase [Rhodococcus equi 103S]
gi|311888761|emb|CBH48073.1| putative histone deacetylase [Rhodococcus equi 103S]
Length = 424
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 126/277 (45%), Gaps = 31/277 (11%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
+++SPDY +S+ HP + ++ G +D +V P AS DLL +H+
Sbjct: 20 VVWSPDY-LSYR-WSPQHPMNPTRLDLTMALADGLGLIDAAEVVRPDAASDADLLRIHTP 77
Query: 97 SYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKV------LYPFRKQV-----GGTILAAK 145
+Y+++ V + + P AL P + + ++P + GG++ AAK
Sbjct: 78 AYIEA------VKLAGDGPDAALPPELETRHGLGTDDNPIFPRMHEASAVLAGGSLAAAK 131
Query: 146 -LAKERGW-AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQG 203
+A R A+++GGG HH AD GFC Y D ++ I + + R+ +D+DAH G
Sbjct: 132 EIASGRARRAVSIGGGMHHAMADWASGFCVYNDAAIAISW-LLDNGFDRIAYVDIDAHHG 190
Query: 204 NGHEKDFSSDSRVYILDMF-NPG-IYPRDYEARRFIDQKVE-------VVSGTTTNEYLK 254
+G + F D RV + + +P ++P + E V+ GT+ +L+
Sbjct: 191 DGVQHAFLGDPRVMTISIHQHPATLWPNTGWSSEVGSGAAEGTAINLPVLPGTSDALWLR 250
Query: 255 KLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ A F P++VI G D DPL L +
Sbjct: 251 GFHAVVPAAIAGFRPQIVISQCGADNHREDPLADLAL 287
>gi|34497781|ref|NP_901996.1| histone deacetylase/AcuC/AphA family protein [Chromobacterium
violaceum ATCC 12472]
gi|34103637|gb|AAQ59998.1| probable histone deacetylase/AcuC/AphA family protein
[Chromobacterium violaceum ATCC 12472]
Length = 302
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 86/179 (48%), Gaps = 13/179 (7%)
Query: 122 NCLVQRKVLYPF--------RKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCA 173
+ QR++ P+ R+ VG T+ A++ A G +N+ GG HH + G GFC
Sbjct: 68 DARAQREIGLPWSPELAERSRRSVGATVAASRSALLEGCGVNLAGGTHHAGRERGSGFCM 127
Query: 174 YADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEA 233
+ DI++ + + RV+I+DLD HQG+G + + R++ M R++
Sbjct: 128 FNDIAVASMLLLAEARVRRVLIVDLDVHQGDGTAAIAADEPRIFTFSMHG----ARNFPF 183
Query: 234 RRF-IDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
RR D +++ GT YL L AL P+LV Y AG D GD LG L +
Sbjct: 184 RRVDSDWDIDLPDGTEDAAYLDALARALPELFARARPDLVCYLAGADPYHGDRLGRLAL 242
>gi|146308737|ref|YP_001189202.1| histone deacetylase superfamily protein [Pseudomonas mendocina ymp]
gi|145576938|gb|ABP86470.1| histone deacetylase superfamily [Pseudomonas mendocina ymp]
Length = 306
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 114/258 (44%), Gaps = 14/258 (5%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPL+Y DY F H F K+ + L G + P E L +VH
Sbjct: 3 LPLVYHEDYSPPF---PAGHRFPMEKFRLLRDHLVDSGLTSDAELQRPELCPAEILALVH 59
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAI 154
Y+ + +S + + L +R V + VGG++L A+LA G A
Sbjct: 60 CPDYIARYMAG-ELSYEDQRRLGLPWSEALARRTV-----RAVGGSLLTAELALRHGLAC 113
Query: 155 NVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDS 214
++ GG HH D GFC + D+++ Y + RV+I D D HQG+G + +
Sbjct: 114 HLAGGTHHAHYDFPSGFCIFNDLAVIARYLLEAGRVHRVLIFDCDVHQGDGTARLLEDEP 173
Query: 215 RVYILDMFNPGIYP-RDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVI 273
+ + +P R E+ D + + G +YLK +D+ L + P+LV+
Sbjct: 174 DAITVSLHCEQNFPARKAES----DWDIPLPRGMGDADYLKVVDDTLNYLLPIYQPDLVL 229
Query: 274 YNAGTDILEGDPLGMLKV 291
Y+AG D+ + D LG L++
Sbjct: 230 YDAGVDVHKDDALGYLQL 247
>gi|86140956|ref|ZP_01059515.1| Histone deacetylase superfamily protein [Leeuwenhoekiella
blandensis MED217]
gi|85832898|gb|EAQ51347.1| Histone deacetylase superfamily protein [Leeuwenhoekiella
blandensis MED217]
Length = 300
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 105/244 (43%), Gaps = 25/244 (10%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ + + L EG + EP ++ L VH++ Y+ +L+
Sbjct: 18 HRFPMEKYDLLPKQLLCEGTCTEANFFEPGFPEEKYLTAVHTQEYVTNLK---------- 67
Query: 114 VPPVALFPNCLVQRKVLYPF------RKQV--GGTILAAKLAKERGWAINVGGGFHHCSA 165
AL + RK +P R+Q+ GT+ + A + G A N+ GG HH +
Sbjct: 68 ----ALNLDRRAIRKTGFPLSQELVDREQIIAQGTMTGCEFALKYGIAFNIAGGTHHAYS 123
Query: 166 DEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
G FC D ++ Y + +++I+DLD HQGNG + F D V+ M G
Sbjct: 124 GHGEAFCLLNDQAIAARYLQSKGLAKQILIVDLDVHQGNGTAEIFQDDPSVFTFSMHGAG 183
Query: 226 IYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDP 285
YP E D + V + YL KL E L P+ + Y +G DILE D
Sbjct: 184 NYPFKKETS---DLDIAVPDKSGDAVYLAKLKETLPRLIDQVKPDFIFYLSGVDILETDK 240
Query: 286 LGML 289
LG L
Sbjct: 241 LGRL 244
>gi|108759310|ref|YP_629630.1| histone deacetylase [Myxococcus xanthus DK 1622]
gi|108463190|gb|ABF88375.1| histone deacetylase family protein [Myxococcus xanthus DK 1622]
Length = 299
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 103/250 (41%), Gaps = 33/250 (13%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ + + L G L + E ++DL VH+ YL +L
Sbjct: 17 HRFPMEKYRLLREALLERGVLTPESLTESTPCPRQDLARVHTPRYLDALSQGTLTDA--- 73
Query: 114 VPPVALFPNCLVQRKVLYP--------FRKQVGGTILAAKLAKERGWAINVGGGFHHCSA 165
QR++ +P F V GT+ AA+ A + G N+ GG HH
Sbjct: 74 -----------EQRRLGFPWSPELMRRFSAAVAGTLDAARAALQDGIGGNLSGGTHHGFP 122
Query: 166 DEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
D G GFC + DI++ I +I R +++DLD HQGNG F+ D V+ M
Sbjct: 123 DHGEGFCVFNDIAVAIRVLQASRDIRRAVVVDLDVHQGNGTAAVFTGDDSVFTFSMHGEN 182
Query: 226 IYPRDYEARRFIDQKVEVVSGTTTNEYLKK----LDEALEVAGHTFDPELVIYNAGTDIL 281
+P + V + GT YL L E L+ AG ++ + AG D L
Sbjct: 183 NFPFRKQPSHL---DVGLPDGTGDAAYLDALALHLPEVLDSAGAC----ILFFQAGVDPL 235
Query: 282 EGDPLGMLKV 291
D LG L +
Sbjct: 236 TEDALGRLSL 245
>gi|147674598|ref|YP_001217568.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae O395]
gi|227118489|ref|YP_002820385.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae O395]
gi|262167664|ref|ZP_06035367.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae RC27]
gi|146316481|gb|ABQ21020.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae O395]
gi|227013939|gb|ACP10149.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae O395]
gi|262023869|gb|EEY42567.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae RC27]
Length = 306
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 117/268 (43%), Gaps = 28/268 (10%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKW---GRICQFLSSEGFLDKNCIVEPLEASKEDLL 91
+PLIY P Y L + +P + + + Q SE + P+ A +
Sbjct: 2 IPLIYHPIYSQLDLPVGHRYPINKYRLLYEEIVRQREQSEAWQASFEFHTPIAAELSRIT 61
Query: 92 VVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRK--------QVGGTILA 143
+H Y+++L + R++ +P+ K VGGT L
Sbjct: 62 RLHDPDYVQALLEGT--------------LSAAKMRRIGFPWSKPLIERTLYSVGGTCLT 107
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQG 203
+ A + G AI++ GG+HH AD G GFC + D+++ H+A ++ +V+IID D H G
Sbjct: 108 VEQALQSGVAIHLSGGYHHAHADFGSGFCLFNDLAIAAHFALSLPSVDKVLIIDSDVHHG 167
Query: 204 NGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVA 263
+G + + L +P A V + T E+L +A+E+A
Sbjct: 168 DGTATLCAERDEIITLSFHCDKNFPARKPASSM---DVGYANQTGDEEFLSTFIQAVEMA 224
Query: 264 GHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ P+L++Y+AG DI D LG L +
Sbjct: 225 VNLHRPDLILYDAGVDIHNDDELGYLSI 252
>gi|423197320|ref|ZP_17183903.1| hypothetical protein HMPREF1171_01935 [Aeromonas hydrophila SSU]
gi|404631008|gb|EKB27644.1| hypothetical protein HMPREF1171_01935 [Aeromonas hydrophila SSU]
Length = 298
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 121/263 (46%), Gaps = 21/263 (7%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
L + + P Y S L + H F +K+ + + L + G+ + E AS+ +
Sbjct: 1 MSLCIFHHPLY--SALVLPARHRFPLAKYQALFEQLGNLGY----PLAEAAPASRAQIER 54
Query: 93 VHSESYLKS-LQSSPNVSIIIEVPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKE 149
VH +Y+++ L + + I ++ FP L++R + + VG T+ A++ A
Sbjct: 55 VHDAAYVEAALAGTLDAGAIRQLG----FPWSPVLIERTL-----RSVGATLAASRHALV 105
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKD 209
+G + + GG+HH D G GFC + D+ + + +V+I+DLD HQG+G
Sbjct: 106 QGCGLQISGGYHHAHRDFGSGFCLFNDLVIAAQTCLDEGRCEQVLIVDLDVHQGDGSAAL 165
Query: 210 FSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDP 269
+ L + +PR A + SG + YL L EAL +A + P
Sbjct: 166 CQGRRDIITLSLHGEHNFPRHKPASHM---DFPLPSGMEDDAYLTTLAEALNLALRLYTP 222
Query: 270 ELVIYNAGTDILEGDPLGMLKVK 292
+L++Y AG D+ D LG L +
Sbjct: 223 DLILYQAGVDVHHADELGYLSLS 245
>gi|229524050|ref|ZP_04413455.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae bv.
albensis VL426]
gi|229337631|gb|EEO02648.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae bv.
albensis VL426]
Length = 306
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 119/268 (44%), Gaps = 28/268 (10%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKW---GRICQFLSSEGFLDKNCIVEPLEASKEDLL 91
+PLIY P Y L + +P + + + Q SE + P+ A +
Sbjct: 2 IPLIYHPIYSQLDLPVGHRYPINKYRLLYEEIVRQREQSEAWQASFECHTPIAAELSRIT 61
Query: 92 VVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRK--------QVGGTILA 143
+H +Y+++L +P + R++ +P+ K VGGT L
Sbjct: 62 PLHDPAYVQALLEG-------RLPAAKM-------RRIGFPWSKPLIERTLYSVGGTCLT 107
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQG 203
+ A + G AI++ GG+HH AD G GFC + D+++ H+A ++ +V+IID D H G
Sbjct: 108 VEQALQSGVAIHLSGGYHHAHADFGSGFCLFNDLAIAAHFALSLPSVDKVLIIDSDVHHG 167
Query: 204 NGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVA 263
+G + + L +P A V + T E+L + +E+A
Sbjct: 168 DGTATLCAERDDIITLSFHCDKNFPARKPASSM---DVGFANQTGDEEFLSTFIQVVEMA 224
Query: 264 GHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ P+L++Y+AG DI D LG L +
Sbjct: 225 VNLHRPDLILYDAGVDIHSDDELGYLSI 252
>gi|170746500|ref|YP_001752760.1| histone deacetylase superfamily protein [Methylobacterium
radiotolerans JCM 2831]
gi|170653022|gb|ACB22077.1| histone deacetylase superfamily [Methylobacterium radiotolerans JCM
2831]
Length = 306
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 117/256 (45%), Gaps = 17/256 (6%)
Query: 36 PLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHS 95
P+ + P Y+ + H F K+G + + L ++G L V P AS + LL H
Sbjct: 4 PIAFHPAYEAP---LPSGHRFPMRKYGLLAETLVAKG-LAPLGFVTPEPASADILLRAHD 59
Query: 96 ESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAIN 155
+Y+ ++ + +V IE LV+R R VGGT+LA +LA G A +
Sbjct: 60 PAYVDAVLAC-DVGREIERAIGLPVDAALVRRS-----RASVGGTLLAGRLALAEGLAGS 113
Query: 156 VGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSR 215
GG HH +G GFC D+++ + + RV+++DLD HQG+G ++D
Sbjct: 114 AAGGSHHARRQQGAGFCVLNDVAVAARTLQAEGLVRRVLVVDLDVHQGDG-----TADCL 168
Query: 216 VYILDMFNPGIY-PRDYEARRFI-DQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVI 273
D+F I+ +Y A++ D + + YL L L F P+LV
Sbjct: 169 ALSPDLFTLSIHCENNYPAQKIAGDLDIGLPDRLDDAGYLDVLRARLPPLLDAFAPDLVF 228
Query: 274 YNAGTDILEGDPLGML 289
YNAG D D LG L
Sbjct: 229 YNAGVDPHRDDRLGRL 244
>gi|375266235|ref|YP_005023678.1| histone deacetylase/AcuC/AphA family protein [Vibrio sp. EJY3]
gi|369841555|gb|AEX22699.1| histone deacetylase/AcuC/AphA family protein [Vibrio sp. EJY3]
Length = 305
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 119/268 (44%), Gaps = 29/268 (10%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWG----RICQFLSSEGFLDKNCIVEPLEASKEDL 90
LPLIY P Y S L + + H + K+ + + L +E + EP S D+
Sbjct: 2 LPLIYHPIY--SKLALPEGHRYPIMKYQYLYEAVQEKLENENSQSRVQFFEPTALSVADI 59
Query: 91 LVVHSESYLKSLQSSPNVSIIIEVPPVAL----FP--NCLVQRKVLYPFRKQVGGTILAA 144
VH Y+ L S +P + FP L+ R + GT+L A
Sbjct: 60 KRVHEAEYVDLLVSG-------SMPAAKMRRIGFPWSEALITRTL-----TSAAGTVLTA 107
Query: 145 KLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
+ A E G A+++ GG+HH D G GFC + D+ + + ++ +V++ID D H G+
Sbjct: 108 EKALEHGVALHLSGGYHHAHRDFGSGFCLFNDLVIAAKHMLDHDDVDKVLVIDSDVHHGD 167
Query: 205 GHEKDFSSDSRVYILDMFNPGIYP-RDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVA 263
G + + L +P R E+ D V +V GT +L E +++A
Sbjct: 168 GTATLCQEEPDIVTLSFHCDKNFPARKPES----DLDVPLVRGTDDETFLMTFKEVVQMA 223
Query: 264 GHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ P++VIY+AG DI D LG V
Sbjct: 224 LNLHRPDMVIYDAGVDIHTDDELGYFDV 251
>gi|269962118|ref|ZP_06176472.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269833202|gb|EEZ87307.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 306
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 122/269 (45%), Gaps = 31/269 (11%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQF----LSSEGFLDKNCIVEPLEASKEDL 90
LPLIY P Y S L + H + K+ + Q L+SE + + +P S +D+
Sbjct: 2 LPLIYHPIY--SQLDLPDGHRYPIMKYRYLYQAVMEKLASEDWGGQIECFQPSPLSTDDI 59
Query: 91 LVVHSESYLKSLQSSPNVSIIIEVPPVAL----FP--NCLVQRKVLYPFRKQVGGTILAA 144
VH Y+ L + +P + FP L+ R + GT+L A
Sbjct: 60 KRVHDGEYVDLLVTGA-------MPAAKMRRIGFPWSEALITRTL-----TSTAGTVLTA 107
Query: 145 KLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
+ A E G AI++ GG+HH + G GFC + D+++ + ++ +VMIID D H G+
Sbjct: 108 EKALEHGVAIHLSGGYHHAHKNFGSGFCLFNDLAIAAKHMLDNEHVDKVMIIDSDVHHGD 167
Query: 205 GHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNE--YLKKLDEALEV 262
G S+ + L +P R D ++V TN+ YL E +E+
Sbjct: 168 GTATICESEPDIVTLSFHCDKNFP-----ARKPDSDLDVPLSRDTNDETYLMTFKEVVEM 222
Query: 263 AGHTFDPELVIYNAGTDILEGDPLGMLKV 291
A + P++VIY+AG DI D LG V
Sbjct: 223 AINLHRPDIVIYDAGVDIHVDDELGYFNV 251
>gi|237801473|ref|ZP_04589934.1| histone deacetylase family protein [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331024332|gb|EGI04389.1| histone deacetylase family protein [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 307
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 117/263 (44%), Gaps = 20/263 (7%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LPLIY DY +F H F K+ + +L G ++ P + L +
Sbjct: 1 MSLPLIYHDDYSPAF---PPEHRFPMDKFRLLRDYLVDSGLTSDVQLIRPDICPADILAL 57
Query: 93 VHSESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
H SY+ S S + +P + L +R V + VGG++L A +A +
Sbjct: 58 AHDPSYISRYLSGDLSREDQRRLGLP----WSEALARRTV-----RAVGGSLLTADMALK 108
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKD 209
G A ++ GG HH D GFC + D+++ Y + +V+I D D HQG+G +
Sbjct: 109 HGLACHLAGGTHHAHYDYPAGFCIFNDLAVISQYLLQSGRVDKVLIFDCDVHQGDGTARI 168
Query: 210 FSSDSRVYILDMFNPGIYPRDYEARRF-IDQKVEVVSGTTTNEYLKKLDEALEVAGHTFD 268
+ + + +P AR+ D + + G EYL +D+ L +
Sbjct: 169 LADTEDAITVSLHCEKNFP----ARKAQSDWDIPLPMGMGDAEYLNVVDDLLNYLLPFYK 224
Query: 269 PELVIYNAGTDILEGDPLGMLKV 291
P+LV+Y+AG D+ + D LG L++
Sbjct: 225 PDLVLYDAGVDVHKDDALGYLQL 247
>gi|345301994|ref|YP_004823896.1| histone deacetylase [Rhodothermus marinus SG0.5JP17-172]
gi|345111227|gb|AEN72059.1| Histone deacetylase [Rhodothermus marinus SG0.5JP17-172]
Length = 378
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 123/276 (44%), Gaps = 36/276 (13%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+P++Y PDY G E HPF + + L + G + P EA++E++L VH
Sbjct: 2 VPVVYHPDYLTYCFGPE--HPFSPVRLEMLWTLLEALGC--APTPIRPPEATREEVLRVH 57
Query: 95 SESYLKSLQSSPNVSII-------IEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLA 147
+E Y+ ++++ + ++ P V +FP+ +VL VGGT+ A+L
Sbjct: 58 AEDYVARVEAASRGEYVPDAEAFGLDTPDVPVFPDMDRAARVL------VGGTLHGARLI 111
Query: 148 KERGWA---INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
E G A + +GGGFHH GFC Y D+S+ I A + RV ID+D H G+
Sbjct: 112 AE-GRAPTVLQLGGGFHHAHPARASGFCVYNDLSIAIR-ALTDAGL-RVAYIDIDVHHGD 168
Query: 205 GHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQ-----------KVEVVSGTTTNEYL 253
G + + V + + G Y + FID+ V + T YL
Sbjct: 169 GVQAIHYREDTVLTISLHETGQY--LFPGTGFIDEIGEGRGQGFSLNVPLQPFTDDESYL 226
Query: 254 KKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGML 289
+ + + A F P++++ G D DPL L
Sbjct: 227 EVFERVVPHALVMFRPDVLVVQCGADAHFQDPLADL 262
>gi|422923349|ref|ZP_16956503.1| histone deacetylase domain protein [Vibrio cholerae BJG-01]
gi|341644088|gb|EGS68329.1| histone deacetylase domain protein [Vibrio cholerae BJG-01]
Length = 306
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 118/268 (44%), Gaps = 28/268 (10%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKW---GRICQFLSSEGFLDKNCIVEPLEASKEDLL 91
+PLIY P Y L + +P + + + Q SE + P+ A +
Sbjct: 2 IPLIYHPIYSQLDLPVGHRYPINKYRLLYEEIVRQREQSEAWQASFEFHTPIAAELSRIT 61
Query: 92 VVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRK--------QVGGTILA 143
+H Y+++L +P + R++ +P+ K VGGT L
Sbjct: 62 RLHDPDYVQALLEG-------RLPAAKM-------RRIGFPWSKPLIERTLHSVGGTCLT 107
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQG 203
+ A + G AI++ GG+HH AD G GFC + D+++ H+A ++ +V+IID D H G
Sbjct: 108 VEQALQSGVAIHLSGGYHHAHADFGSGFCLFNDLAIAAHFALSLPSVDKVLIIDSDVHHG 167
Query: 204 NGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVA 263
+G + + L +P A V + T E+L + +E+A
Sbjct: 168 DGTATLCAERDDIITLSFHCDKNFPARKPASSM---DVGFANQTGDEEFLSTFIQVVEMA 224
Query: 264 GHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ P+L++Y+AG DI D LG L +
Sbjct: 225 VNLHRPDLILYDAGVDIHNDDELGYLSI 252
>gi|254286837|ref|ZP_04961790.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae
AM-19226]
gi|150423128|gb|EDN15076.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae
AM-19226]
Length = 306
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 118/268 (44%), Gaps = 28/268 (10%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKW---GRICQFLSSEGFLDKNCIVEPLEASKEDLL 91
+PLIY P Y L + +P + + + Q SE + P+ A +
Sbjct: 2 IPLIYHPIYSQLDLPVGHRYPINKYRLLYEEIVRQREQSEAWQASFEFHTPIAAELSRIT 61
Query: 92 VVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRK--------QVGGTILA 143
+H Y+++L +P + R++ +P+ K VGGT L
Sbjct: 62 RLHDPDYVQALLEG-------RLPAAKM-------RRIGFPWSKPLIERTLYSVGGTCLT 107
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQG 203
+ A + G AI++ GG+HH AD G GFC + D+++ H+A ++ +V+IID D H G
Sbjct: 108 VEQALQSGVAIHLSGGYHHAHADFGSGFCLFNDLAIAAHFALSLPSVDKVLIIDSDVHHG 167
Query: 204 NGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVA 263
+G + + L +P A V + T E+L + +E+A
Sbjct: 168 DGTATLCAERDDIITLSFHCDKNFPARKPASSM---DVGFANQTGDEEFLSTFIQVVEMA 224
Query: 264 GHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ P+L++Y+AG DI D LG L +
Sbjct: 225 VNLHRPDLILYDAGVDIHNDDELGYLSI 252
>gi|229528940|ref|ZP_04418330.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae
12129(1)]
gi|297579548|ref|ZP_06941476.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae
RC385]
gi|384425022|ref|YP_005634380.1| Histone deacetylase/AcuC/AphA family protein [Vibrio cholerae
LMA3984-4]
gi|229332714|gb|EEN98200.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae
12129(1)]
gi|297537142|gb|EFH75975.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae
RC385]
gi|327484575|gb|AEA78982.1| Histone deacetylase/AcuC/AphA family protein [Vibrio cholerae
LMA3984-4]
Length = 306
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 118/268 (44%), Gaps = 28/268 (10%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKW---GRICQFLSSEGFLDKNCIVEPLEASKEDLL 91
+PLIY P Y L + +P + + + Q SE + P+ A +
Sbjct: 2 IPLIYHPIYSQLDLPVGHRYPINKYRLLYEEIVRQREQSEAWQASFEFHTPIAAELSRIT 61
Query: 92 VVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRK--------QVGGTILA 143
+H Y+++L +P + R++ +P+ K VGGT L
Sbjct: 62 RLHDPDYVQALLEG-------RLPAAKM-------RRIGFPWSKPLIERTLYSVGGTCLT 107
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQG 203
+ A + G AI++ GG+HH AD G GFC + D+++ H+A ++ +V+IID D H G
Sbjct: 108 VEQALQSGVAIHLSGGYHHAHADFGSGFCLFNDLAIAAHFALSLPSVDKVLIIDSDVHHG 167
Query: 204 NGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVA 263
+G + + L +P A V + T E+L + +E+A
Sbjct: 168 DGTATLCAERDDIITLSFHCDKNFPARKPASSM---DVGFANQTGDEEFLSTFIQVVEMA 224
Query: 264 GHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ P+L++Y+AG DI D LG L +
Sbjct: 225 VNLHRPDLILYDAGVDIHNDDELGYLSI 252
>gi|395008638|ref|ZP_10392264.1| deacetylase, histone deacetylase/acetoin utilization protein
[Acidovorax sp. CF316]
gi|394313360|gb|EJE50408.1| deacetylase, histone deacetylase/acetoin utilization protein
[Acidovorax sp. CF316]
Length = 325
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 107/230 (46%), Gaps = 40/230 (17%)
Query: 85 ASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPF--------RKQ 136
AS +L + H+ +Y+ ++ + + P QR++ +P+ R+
Sbjct: 46 ASDAELALAHTPAYIDAIANG-----TLPAP---------AQREIGFPWSPAMAERARRS 91
Query: 137 VGGTILAAKLAKERGWAI----NVGGGFHHCSADEGGGFCAYADISLCIH-----YAFVQ 187
VG TI A ++A G N+ GG HH AD+G GFC + D+++ +A
Sbjct: 92 VGATIAACRVAMAGGEGGGIAGNLAGGTHHAYADKGSGFCVFNDMAVAARLMQDEHARAA 151
Query: 188 LNIS------RVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKV 241
+ RV +IDLD HQGNG + F D V+ L + +P EA D V
Sbjct: 152 SAMGANPLALRVAVIDLDVHQGNGTARIFQGDDSVFTLSLHGARNFPFRKEAG---DLDV 208
Query: 242 EVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
E+ G +EYL L++AL+ F P LV+Y AG D GD LG L +
Sbjct: 209 ELPDGCGDDEYLAALEQALDTLEQRFAPGLVLYLAGADPHVGDRLGRLHL 258
>gi|325271806|ref|ZP_08138273.1| histone deacetylase superfamily protein [Pseudomonas sp. TJI-51]
gi|324103053|gb|EGC00433.1| histone deacetylase superfamily protein [Pseudomonas sp. TJI-51]
Length = 304
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 113/261 (43%), Gaps = 20/261 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY DY F H F K+ + L G ++ P + L + H
Sbjct: 3 LPLIYHEDYSPEF---PAEHRFPMDKFRLLHDHLVDSGLTTDQALLRPDICPNDILALAH 59
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
Y+ + S + +P + L +R V + VGG++L A+LA + G
Sbjct: 60 DRDYIARYMNGELSREDQRRLGLP----WSEALARRTV-----RAVGGSLLTAELALQHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A ++ GG HH D GFC + D+++ Y + RV+I D D HQG+G +
Sbjct: 111 VACHLAGGTHHAHYDHPAGFCIFNDLAVISRYLLEAGRVQRVLIFDCDVHQGDGTARILH 170
Query: 212 SDSRVYILDMFNPGIYPRDYEARRF-IDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPE 270
+ + +P AR+ D + + G YL +D+ L + P+
Sbjct: 171 DTPEAITVSLHCEQNFP----ARKANSDWDIPLPRGMGDTAYLNVVDDTLNYLLPLYQPD 226
Query: 271 LVIYNAGTDILEGDPLGMLKV 291
LV+Y+AG D+ + D LG L++
Sbjct: 227 LVLYDAGVDVHKDDALGYLQL 247
>gi|121730304|ref|ZP_01682673.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae V52]
gi|121627942|gb|EAX60511.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae V52]
Length = 306
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 118/268 (44%), Gaps = 28/268 (10%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKW---GRICQFLSSEGFLDKNCIVEPLEASKEDLL 91
+PLIY P Y L + +P + + + Q SE + P+ A +
Sbjct: 2 IPLIYHPIYSQLDLPVGHRYPINKYRLLYEEIVRQREQSEAWQASFEFHTPIAAELSRIT 61
Query: 92 VVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRK--------QVGGTILA 143
+H Y+++L +P + R++ +P+ K VGGT L
Sbjct: 62 RLHDPDYVQALLEG-------RLPAAKM-------RRIGFPWSKTLVERTLHSVGGTCLT 107
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQG 203
+ A + G AI++ GG+HH AD G GFC + D+++ H+A ++ +V+IID D H G
Sbjct: 108 VEQALQSGVAIHLSGGYHHAHADFGSGFCLFNDLAIAAHFALSLPSVDKVLIIDSDVHHG 167
Query: 204 NGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVA 263
+G + + L +P A V + T E+L + +E+A
Sbjct: 168 DGTATLCAERDDIITLSFHCDKNFPARKPASSM---DVGFANQTGDEEFLSTFIQVVEMA 224
Query: 264 GHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ P+L++Y+AG DI D LG L +
Sbjct: 225 VNLHRPDLILYDAGVDIHNDDELGYLSI 252
>gi|429211647|ref|ZP_19202812.1| histone deacetylase superfamily protein [Pseudomonas sp. M1]
gi|428156129|gb|EKX02677.1| histone deacetylase superfamily protein [Pseudomonas sp. M1]
Length = 306
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 118/260 (45%), Gaps = 18/260 (6%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPL+Y DY F H F K+ + + L G ++ P + L + H
Sbjct: 3 LPLVYHDDYSPPF---PAGHRFPMEKFRLLKEHLVDSGLTSDAALLRPEPCPADILALAH 59
Query: 95 SESYLKSLQSSPNVSIIIEVPPVAL-FPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWA 153
Y++ S E+ + L + L +R V + VGG++L A+LA G A
Sbjct: 60 DRGYIERYCSGDMSRE--ELRRLGLPWSEALARRTV-----RAVGGSLLGAELALRHGLA 112
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSD 213
++ GG HH D GFC + D+++ + RV+I D D HQG+G +
Sbjct: 113 CHLAGGTHHAHHDHASGFCIFNDLAVIALHLLASGRAGRVLIFDCDVHQGDGTARILEQ- 171
Query: 214 SRVYILDMFNPGIY-PRDYEARR-FIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPEL 271
+ D ++ +++ AR+ D + + +YL+ +DEAL+ + P+L
Sbjct: 172 ----VADAITVSLHCEKNFPARKAHSDWDIPLPLHMGDADYLRVVDEALDYLLPLYQPDL 227
Query: 272 VIYNAGTDILEGDPLGMLKV 291
V+Y+AG D+ + D LG L +
Sbjct: 228 VLYDAGVDVHKDDALGYLNL 247
>gi|119584564|gb|EAW64160.1| histone deacetylase 11, isoform CRA_d [Homo sapiens]
Length = 219
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 66/94 (70%)
Query: 198 LDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLD 257
L+ +GNGHE+DF D RVYI+D++N IYP D A++ I +KVE+ GT +EYL K++
Sbjct: 52 LNELKGNGHERDFMDDKRVYIMDVYNRHIYPGDRFAKQAIRRKVELEWGTEDDEYLDKVE 111
Query: 258 EALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
++ + P++V+YNAGTDILEGD LG L +
Sbjct: 112 RNIKKSLQEHLPDVVVYNAGTDILEGDRLGGLSI 145
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 41/58 (70%)
Query: 48 LGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSS 105
+G+EKLHPFD+ KWG++ FL E L + +VE EAS+EDLLVVH+ YL L+ +
Sbjct: 1 MGLEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEAREASEEDLLVVHTRRYLNELKGN 58
>gi|325106665|ref|YP_004267733.1| histone deacetylase [Planctomyces brasiliensis DSM 5305]
gi|324966933|gb|ADY57711.1| Histone deacetylase [Planctomyces brasiliensis DSM 5305]
Length = 302
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 112/244 (45%), Gaps = 9/244 (3%)
Query: 48 LGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPN 107
L + + H F SK+ + L +G L+ + E AS E LL VH+ YLK ++
Sbjct: 11 LPLPETHRFPMSKYSLLRARLLEQGILEPQVLHEAPAASDEQLLRVHTAEYLKRVKQG-- 68
Query: 108 VSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADE 167
+ + FP L +++ R+ G TI AA A IN+ GG HH AD
Sbjct: 69 -GLTKQETRRIGFPWSL---EMVERSRRSTGATIAAAHAALTTRVGINLAGGTHHSFADC 124
Query: 168 GGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIY 227
G G+C + D++ + + +V++ID+D HQGNG F D V+ + +
Sbjct: 125 GEGYCVFNDVACASRDLQQTVGLGQVLVIDVDVHQGNGTAAIFEKDPSVFTFSIHGAKNF 184
Query: 228 PRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLG 287
P + D V + T +EYL++L LE A +PE V Y AG D D G
Sbjct: 185 PLK---KTISDLDVPLDDNTEDDEYLQRLTAGLEQAFARCEPEFVFYVAGADPYHEDRFG 241
Query: 288 MLKV 291
+K+
Sbjct: 242 RMKL 245
>gi|307154340|ref|YP_003889724.1| histone deacetylase [Cyanothece sp. PCC 7822]
gi|306984568|gb|ADN16449.1| Histone deacetylase [Cyanothece sp. PCC 7822]
Length = 303
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 114/258 (44%), Gaps = 18/258 (6%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+P++Y P+Y + H F K+ + L ++G P ++E + +VH
Sbjct: 2 IPIVYHPNY---VTPLPDGHRFPMPKFKLLYDLLITDGITTPEHTHIPEVPAREIIELVH 58
Query: 95 SESYLKSLQSS---PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
+ Y+++ P I +P + LV R V GTIL A+LA + G
Sbjct: 59 TPEYVQAYYGGTLDPKAQRRIGLP----WSPGLVTRTC-----TAVAGTILTAQLALKYG 109
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A N GG HH G GFC + D+++ + +V+IIDLD HQG+G F
Sbjct: 110 LACNTAGGTHHAFPSFGSGFCIFNDLAIATRRLQQLELVKKVLIIDLDVHQGDGTAYIFQ 169
Query: 212 SDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPEL 271
+D V+ M +P ++ D V + G YLK L + L +P+L
Sbjct: 170 NDESVFTFSMHCEANFP---GTKQKSDLDVPLAVGLDDEGYLKILSQYLPDLLGEVNPDL 226
Query: 272 VIYNAGTDILEGDPLGML 289
V+Y+AG D D LG L
Sbjct: 227 VLYDAGVDTHIEDRLGKL 244
>gi|417821386|ref|ZP_12468000.1| histone deacetylase domain protein [Vibrio cholerae HE39]
gi|423956550|ref|ZP_17735104.1| histone deacetylase domain protein [Vibrio cholerae HE-40]
gi|423985338|ref|ZP_17738655.1| histone deacetylase domain protein [Vibrio cholerae HE-46]
gi|340039017|gb|EGQ99991.1| histone deacetylase domain protein [Vibrio cholerae HE39]
gi|408657344|gb|EKL28424.1| histone deacetylase domain protein [Vibrio cholerae HE-40]
gi|408663942|gb|EKL34787.1| histone deacetylase domain protein [Vibrio cholerae HE-46]
Length = 306
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 118/268 (44%), Gaps = 28/268 (10%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKW---GRICQFLSSEGFLDKNCIVEPLEASKEDLL 91
+PLIY P Y L + +P + + + Q SE + P+ A +
Sbjct: 2 IPLIYHPIYSQLDLPVGHRYPINKYRLLYEEIVRQREQSEAWQASFEFHTPIAAELSRIT 61
Query: 92 VVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRK--------QVGGTILA 143
+H Y+++L +P + R++ +P+ K VGGT L
Sbjct: 62 PLHDPDYVQALLEG-------TLPAAKM-------RRIGFPWSKPLIERTLHSVGGTCLT 107
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQG 203
+ A + G AI++ GG+HH AD G GFC + D+++ H+A ++ +V+IID D H G
Sbjct: 108 VEQALQSGVAIHLSGGYHHAHADFGSGFCLFNDLAIAAHFALSLPSVDKVLIIDSDVHHG 167
Query: 204 NGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVA 263
+G + + L +P A V + T E+L + +E+A
Sbjct: 168 DGTATLCAERDDIITLSFHCDKNFPARKPASSM---DVGFANQTGDEEFLSTFIQVVEMA 224
Query: 264 GHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ P+L++Y+AG DI D LG L +
Sbjct: 225 VNLHRPDLILYDAGVDIHNDDELGYLSI 252
>gi|94985520|ref|YP_604884.1| histone deacetylase superfamily protein [Deinococcus geothermalis
DSM 11300]
gi|94555801|gb|ABF45715.1| histone deacetylase superfamily [Deinococcus geothermalis DSM
11300]
Length = 306
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 77/159 (48%), Gaps = 5/159 (3%)
Query: 134 RKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRV 193
R+ GG++ A A +GW N+ GG HH D GFC D ++ H A + RV
Sbjct: 98 RRAAGGSLAALHDALAQGWGANLAGGTHHAFRDRAEGFCLVNDAAILTHLALDEGLARRV 157
Query: 194 MIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYL 253
I+DLD HQGNG + + R L + YP E + + G T EYL
Sbjct: 158 AILDLDVHQGNGTAALLAGEERALTLSIHGERNYPFRKETSSL---DLGLPDGVTDAEYL 214
Query: 254 KKL-DEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ L DEAL V F P+L++Y AG D+L GD G +
Sbjct: 215 RVLQDEALPVL-DAFRPDLLLYLAGVDVLAGDRFGRFAL 252
>gi|171463998|ref|YP_001798111.1| histone deacetylase superfamily protein [Polynucleobacter
necessarius subsp. necessarius STIR1]
gi|171193536|gb|ACB44497.1| histone deacetylase superfamily [Polynucleobacter necessarius
subsp. necessarius STIR1]
Length = 299
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 111/247 (44%), Gaps = 29/247 (11%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K R+ +SS+ ++ +VE A+ +L H SYL I+
Sbjct: 17 HRFPMEKHSRLRDLVSSQASIE---LVEVPPATDTQILYAHDPSYL------------IK 61
Query: 114 VPPVALFPNCLVQRKVLYPF--------RKQVGGTILAAKLAKERGWAINVGGGFHHCSA 165
+ L + QR++ +P+ R+ G T+ AAK A + G A N+ GG HH
Sbjct: 62 IIDGTL--SAQEQREIRFPWSTLMVERSRRSAGATVAAAKTALKEGIASNLAGGTHHAYR 119
Query: 166 DEGGGFCAYADISLCIHYAFVQLNIS-RVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNP 224
D G GFC + D ++ +++ S ++ +IDLD HQGNG +D ++ +
Sbjct: 120 DAGSGFCVFNDSAIADRTLQKEISASLKIAVIDLDVHQGNGTASILQNDDSIFTPSIHGE 179
Query: 225 GIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGD 284
+P E D + + G YL L + L+ F + +I+ AG D EGD
Sbjct: 180 NNFPFKKEQS---DLDLGLTDGCNDEIYLHSLSQCLDQLDARFKADFLIFLAGADPHEGD 236
Query: 285 PLGMLKV 291
LG LK+
Sbjct: 237 CLGRLKI 243
>gi|419830506|ref|ZP_14353991.1| histone deacetylase domain protein [Vibrio cholerae HC-1A2]
gi|419834188|ref|ZP_14357643.1| histone deacetylase domain protein [Vibrio cholerae HC-61A2]
gi|422917892|ref|ZP_16952210.1| histone deacetylase domain protein [Vibrio cholerae HC-02A1]
gi|423822793|ref|ZP_17716803.1| histone deacetylase domain protein [Vibrio cholerae HC-55C2]
gi|423856759|ref|ZP_17720611.1| histone deacetylase domain protein [Vibrio cholerae HC-59A1]
gi|423883062|ref|ZP_17724199.1| histone deacetylase domain protein [Vibrio cholerae HC-60A1]
gi|423998319|ref|ZP_17741571.1| histone deacetylase domain protein [Vibrio cholerae HC-02C1]
gi|424017213|ref|ZP_17757042.1| histone deacetylase domain protein [Vibrio cholerae HC-55B2]
gi|424020137|ref|ZP_17759923.1| histone deacetylase domain protein [Vibrio cholerae HC-59B1]
gi|424625511|ref|ZP_18063972.1| histone deacetylase domain protein [Vibrio cholerae HC-50A1]
gi|424629994|ref|ZP_18068281.1| histone deacetylase domain protein [Vibrio cholerae HC-51A1]
gi|424634042|ref|ZP_18072142.1| histone deacetylase domain protein [Vibrio cholerae HC-52A1]
gi|424637120|ref|ZP_18075128.1| histone deacetylase domain protein [Vibrio cholerae HC-55A1]
gi|424641029|ref|ZP_18078912.1| histone deacetylase domain protein [Vibrio cholerae HC-56A1]
gi|424649095|ref|ZP_18086758.1| histone deacetylase domain protein [Vibrio cholerae HC-57A1]
gi|443528013|ref|ZP_21094061.1| histone deacetylase domain protein [Vibrio cholerae HC-78A1]
gi|341636774|gb|EGS61468.1| histone deacetylase domain protein [Vibrio cholerae HC-02A1]
gi|408012064|gb|EKG49860.1| histone deacetylase domain protein [Vibrio cholerae HC-50A1]
gi|408017961|gb|EKG55433.1| histone deacetylase domain protein [Vibrio cholerae HC-52A1]
gi|408023175|gb|EKG60354.1| histone deacetylase domain protein [Vibrio cholerae HC-56A1]
gi|408023669|gb|EKG60828.1| histone deacetylase domain protein [Vibrio cholerae HC-55A1]
gi|408032614|gb|EKG69195.1| histone deacetylase domain protein [Vibrio cholerae HC-57A1]
gi|408054782|gb|EKG89741.1| histone deacetylase domain protein [Vibrio cholerae HC-51A1]
gi|408620279|gb|EKK93291.1| histone deacetylase domain protein [Vibrio cholerae HC-1A2]
gi|408634769|gb|EKL07004.1| histone deacetylase domain protein [Vibrio cholerae HC-55C2]
gi|408640551|gb|EKL12340.1| histone deacetylase domain protein [Vibrio cholerae HC-59A1]
gi|408641186|gb|EKL12967.1| histone deacetylase domain protein [Vibrio cholerae HC-60A1]
gi|408649010|gb|EKL20327.1| histone deacetylase domain protein [Vibrio cholerae HC-61A2]
gi|408852674|gb|EKL92496.1| histone deacetylase domain protein [Vibrio cholerae HC-02C1]
gi|408859924|gb|EKL99578.1| histone deacetylase domain protein [Vibrio cholerae HC-55B2]
gi|408867231|gb|EKM06593.1| histone deacetylase domain protein [Vibrio cholerae HC-59B1]
gi|443453529|gb|ELT17348.1| histone deacetylase domain protein [Vibrio cholerae HC-78A1]
Length = 306
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 118/268 (44%), Gaps = 28/268 (10%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKW---GRICQFLSSEGFLDKNCIVEPLEASKEDLL 91
+PLIY P Y L + +P + + + Q SE + P+ A +
Sbjct: 2 IPLIYHPIYSQLDLPVGHRYPINKYRLLYEEIVRQREQSEAWQASFEFHTPIAAELSRIT 61
Query: 92 VVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRK--------QVGGTILA 143
+H Y+++L +P + R++ +P+ K VGGT L
Sbjct: 62 PLHDPDYVQALLEG-------RLPSAKM-------RRIGFPWSKPLIERTLYSVGGTCLT 107
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQG 203
+ A + G AI++ GG+HH AD G GFC + D+++ H+A ++ +V+IID D H G
Sbjct: 108 VEQALQSGVAIHLSGGYHHAHADFGSGFCLFNDLAIAAHFALSLPSVDKVLIIDSDVHHG 167
Query: 204 NGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVA 263
+G + + L +P A V + T E+L + +E+A
Sbjct: 168 DGTATLCAERDDIITLSFHCDKNFPARKPASSM---DVGFANQTGDEEFLSTFIQVVEMA 224
Query: 264 GHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ P+L++Y+AG DI D LG L +
Sbjct: 225 VNLHRPDLILYDAGVDIHSDDELGYLSI 252
>gi|422910892|ref|ZP_16945520.1| histone deacetylase domain protein [Vibrio cholerae HE-09]
gi|424660555|ref|ZP_18097802.1| histone deacetylase domain protein [Vibrio cholerae HE-16]
gi|341632766|gb|EGS57623.1| histone deacetylase domain protein [Vibrio cholerae HE-09]
gi|408050285|gb|EKG85450.1| histone deacetylase domain protein [Vibrio cholerae HE-16]
Length = 306
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 118/268 (44%), Gaps = 28/268 (10%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKW---GRICQFLSSEGFLDKNCIVEPLEASKEDLL 91
+PLIY P Y L + +P + + + Q SE + P+ A +
Sbjct: 2 IPLIYHPIYSQLDLPVGHRYPINKYRLLYEEIVRQREQSEAWQASFEFHTPVAAELSRIT 61
Query: 92 VVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRK--------QVGGTILA 143
+H Y+++L +P + R++ +P+ K VGGT L
Sbjct: 62 PLHDPDYVQALLEG-------RLPAAKM-------RRIGFPWSKPLIERTLYSVGGTCLT 107
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQG 203
+ A + G AI++ GG+HH AD G GFC + D+++ H+A ++ +V+IID D H G
Sbjct: 108 VEQALQSGVAIHLSGGYHHAHADFGSGFCLFNDLAIAAHFALSLPSVDKVLIIDSDVHHG 167
Query: 204 NGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVA 263
+G + + L +P A V + T E+L + +E+A
Sbjct: 168 DGTATLCAERDDIITLSFHCDKNFPARKPASSM---DVGFANQTGDEEFLSTFIQVVEMA 224
Query: 264 GHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ P+L++Y+AG DI D LG L +
Sbjct: 225 VNLHRPDLILYDAGVDIHSDDELGYLSI 252
>gi|421351773|ref|ZP_15802138.1| histone deacetylase domain protein [Vibrio cholerae HE-25]
gi|395952218|gb|EJH62832.1| histone deacetylase domain protein [Vibrio cholerae HE-25]
Length = 306
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 118/268 (44%), Gaps = 28/268 (10%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKW---GRICQFLSSEGFLDKNCIVEPLEASKEDLL 91
+PLIY P Y L + +P + + + Q SE + P+ A +
Sbjct: 2 IPLIYHPIYSQLDLPVGHRYPINKYRLLYEEIVRQREQSEAWQASFEFHTPIAAELSRIT 61
Query: 92 VVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRK--------QVGGTILA 143
+H Y+++L +P + R++ +P+ K VGGT L
Sbjct: 62 PLHDPDYVQALLEG-------TLPAAKM-------RRIGFPWSKTLIERTLHSVGGTCLT 107
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQG 203
+ A + G AI++ GG+HH AD G GFC + D+++ H+A ++ +V+IID D H G
Sbjct: 108 VEQALQSGVAIHLSGGYHHAHADFGSGFCLFNDLAIAAHFALSLPSVDKVLIIDSDVHHG 167
Query: 204 NGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVA 263
+G + + L +P A V + T E+L + +E+A
Sbjct: 168 DGTATLCAERDDIITLSFHCDKNFPARKPASSM---DVGFANQTGDEEFLSTFIQVVEMA 224
Query: 264 GHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ P+L++Y+AG DI D LG L +
Sbjct: 225 VNLHRPDLILYDAGVDIHNDDELGYLSI 252
>gi|219848505|ref|YP_002462938.1| histone deacetylase superfamily protein [Chloroflexus aggregans DSM
9485]
gi|219542764|gb|ACL24502.1| histone deacetylase superfamily [Chloroflexus aggregans DSM 9485]
Length = 299
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 110/239 (46%), Gaps = 11/239 (4%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ + + + +E + + + P AS ++L+ VH+ +Y++ + + I
Sbjct: 17 HRFPMEKYALLRERVIAENIVSLDRLHVPEPASVDELVRVHTPAYIERVMTGRLTGAEIR 76
Query: 114 VPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCA 173
P +V+R R+ G TI A ++A + G +N+ GG HH AD G G+C
Sbjct: 77 RIGFPWSPQ-MVERS-----RRSAGATIAACRVALQEGVGVNLAGGTHHAFADAGAGYCV 130
Query: 174 YADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP-RDYE 232
+ D ++ + + ++ IID D HQG+G F+ D V+ + +P R +
Sbjct: 131 FNDAAVAARAMQAEGRVRQIAIIDCDVHQGDGTAAIFADDPTVFTFSIHGAHNFPFRKQQ 190
Query: 233 ARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ D + + T YL L+ L T P+LVIY AG D D LG L +
Sbjct: 191 S----DLDIALPDATGDAAYLDALEWGLRQTFATAKPDLVIYLAGADPYYDDRLGRLSL 245
>gi|257060373|ref|YP_003138261.1| histone deacetylase [Cyanothece sp. PCC 8802]
gi|256590539|gb|ACV01426.1| Histone deacetylase [Cyanothece sp. PCC 8802]
Length = 305
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 121/260 (46%), Gaps = 20/260 (7%)
Query: 36 PLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHS 95
P++Y P Y I H F K+ + + L S+ + I P + +VH+
Sbjct: 4 PIVYHPQY---VAPIPDEHRFPMLKFRLLYELLLSDSIAEPKNIYTPEFPELGLIELVHT 60
Query: 96 ESYLKSL-QSSPNVSII--IEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
Y+ + Q + +V I +P + LVQR ++ VGGTIL AKLA + G
Sbjct: 61 AEYINAYCQGTLDVKSQRRIGLP----WSQELVQRTLI-----AVGGTILTAKLALQYGL 111
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLN-ISRVMIIDLDAHQGNGHEKDFS 211
A N GG HH + G GFC + D+++ QL + +V+I+DLD HQG+G F
Sbjct: 112 ASNTAGGTHHAFPNYGSGFCIFNDLAIASR-VLQQLGLVKKVLIVDLDVHQGDGTAVIFE 170
Query: 212 SDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPEL 271
+D V+ + +P ++ D V + G + YL+ L + L P+L
Sbjct: 171 NDPTVFTFSLHCESNFP---AKKQQSDLDVPLPEGLDDDGYLQVLAQYLPDLLSHVKPDL 227
Query: 272 VIYNAGTDILEGDPLGMLKV 291
V+Y+AG D D LG L +
Sbjct: 228 VLYDAGVDTHVSDRLGKLAL 247
>gi|188579954|ref|YP_001923399.1| histone deacetylase superfamily protein [Methylobacterium populi
BJ001]
gi|179343452|gb|ACB78864.1| histone deacetylase superfamily [Methylobacterium populi BJ001]
Length = 294
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 107/242 (44%), Gaps = 18/242 (7%)
Query: 54 HPFDSSKWGRICQFLSSEGFL-DKNCIVEPLEASKEDLLVVHSESYLKSL---QSSPNVS 109
H F K+GR+ + L + G + D + EP +A+ L H +Y+ ++ Q +
Sbjct: 14 HRFPMRKYGRLAETLRARGLVPDGFVMPEPADAAL--LSGAHDPAYVAAVLAAQVPRAIE 71
Query: 110 IIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGG 169
I +P V V R GGT+ AA+LA G A + GG HH G
Sbjct: 72 RAIGLP---------VTESVAARSRASAGGTLRAARLALGHGLAGSTAGGSHHARRAGGA 122
Query: 170 GFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPR 229
GFC + D+++ + I R +IIDLD HQG+G + + ++ L + YP
Sbjct: 123 GFCVFNDVAVAALALRREGAIGRALIIDLDVHQGDGTADCLAREPELFTLSIHCERNYPH 182
Query: 230 DYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGML 289
D + D + + G EY L+ L F P+L+ YNAG D D LG L
Sbjct: 183 D---KVPGDLDIGLPDGLGDAEYRAVLEAHLPGLVQNFAPDLIFYNAGVDPHRDDRLGRL 239
Query: 290 KV 291
+
Sbjct: 240 DL 241
>gi|229522001|ref|ZP_04411418.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae TM
11079-80]
gi|419837765|ref|ZP_14361203.1| histone deacetylase domain protein [Vibrio cholerae HC-46B1]
gi|421344657|ref|ZP_15795060.1| histone deacetylase domain protein [Vibrio cholerae HC-43B1]
gi|421354707|ref|ZP_15805039.1| histone deacetylase domain protein [Vibrio cholerae HE-45]
gi|422307990|ref|ZP_16395143.1| histone deacetylase domain protein [Vibrio cholerae CP1035(8)]
gi|423735719|ref|ZP_17708915.1| histone deacetylase domain protein [Vibrio cholerae HC-41B1]
gi|424010057|ref|ZP_17752993.1| histone deacetylase domain protein [Vibrio cholerae HC-44C1]
gi|229340926|gb|EEO05931.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae TM
11079-80]
gi|395940737|gb|EJH51418.1| histone deacetylase domain protein [Vibrio cholerae HC-43B1]
gi|395953832|gb|EJH64445.1| histone deacetylase domain protein [Vibrio cholerae HE-45]
gi|408618659|gb|EKK91724.1| histone deacetylase domain protein [Vibrio cholerae CP1035(8)]
gi|408629577|gb|EKL02258.1| histone deacetylase domain protein [Vibrio cholerae HC-41B1]
gi|408856313|gb|EKL96008.1| histone deacetylase domain protein [Vibrio cholerae HC-46B1]
gi|408863585|gb|EKM03062.1| histone deacetylase domain protein [Vibrio cholerae HC-44C1]
Length = 306
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 119/268 (44%), Gaps = 28/268 (10%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKW---GRICQFLSSEGFLDKNCIVEPLEASKEDLL 91
+PLIY P Y L + +P + + + Q SE + P+ A +
Sbjct: 2 IPLIYHPIYSQLDLPVGHRYPINKYRLLYEEIVRQREQSEAWQASFEFHTPIAAELSRIT 61
Query: 92 VVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRK--------QVGGTILA 143
+H Y+++L ++P + R++ +P+ K VGGT L
Sbjct: 62 RLHDPDYVQALLEG-------KLPAAKM-------RRIGFPWSKPLIERTLYSVGGTCLT 107
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQG 203
+ A + G AI++ GG+HH AD G GFC + D+++ H+A ++ +V+IID D H G
Sbjct: 108 VEQALQSGVAIHLSGGYHHAHADFGSGFCLFNDLAIAAHFALSLPSVDKVLIIDSDVHHG 167
Query: 204 NGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVA 263
+G + + L +P A V + T E+L + +E+A
Sbjct: 168 DGTAILCAERDDIITLSFHCDKNFPARKPASSM---DVGFANQTGDEEFLSTFIQVVEMA 224
Query: 264 GHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ P+L++Y+AG DI D LG L +
Sbjct: 225 VNLHRPDLILYDAGVDIHNDDELGYLSI 252
>gi|296123734|ref|YP_003631512.1| histone deacetylase [Planctomyces limnophilus DSM 3776]
gi|296016074|gb|ADG69313.1| Histone deacetylase [Planctomyces limnophilus DSM 3776]
Length = 311
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 109/248 (43%), Gaps = 23/248 (9%)
Query: 54 HPFDSSKWGRICQFLS---SEGFLDKNCI--VEPLEASKEDLLVVHSESYLKSLQSSPNV 108
H F K+ + + + G +D I +EP A+ +L+ H+ YL + +
Sbjct: 17 HRFPMRKYAALRERIDLALQSGEIDPQTIELLEPPAATDAQILLAHNADYLYKVSAGEMT 76
Query: 109 SIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEG 168
I+ P L++R R+ G TI AA+ A G+ N+ GG HH AD
Sbjct: 77 RDDIKRLGFPWSPE-LIERS-----RRSSGATIEAARSALVHGFGANLAGGTHHAYADRA 130
Query: 169 GGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
GFC + D + + + RV+I+D D HQGNG D ++ + + YP
Sbjct: 131 EGFCIFNDSVIAARVLQKEQLVQRVLIVDGDVHQGNGTAAITRQDPSIFTFSIHSERNYP 190
Query: 229 RDYEARRFIDQKVEVVSG----TTTNEYLKKLDEALEVAGHTF-DPELVIYNAGTDILEG 283
F+ + ++ G T + YL LDE L F P+LV++ AG D EG
Sbjct: 191 -------FVKETSDLDYGLPDETGDDAYLAALDEGLAACARRFPQPDLVLFLAGADPFEG 243
Query: 284 DPLGMLKV 291
D +G L +
Sbjct: 244 DKMGRLAL 251
>gi|254441358|ref|ZP_05054851.1| Histone deacetylase family, putative [Octadecabacter antarcticus
307]
gi|198251436|gb|EDY75751.1| Histone deacetylase family, putative [Octadecabacter antarcticus
307]
Length = 301
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 119/265 (44%), Gaps = 26/265 (9%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
++P++Y+ YDI + H F+ +K+ ++ +L F ++ + ED+
Sbjct: 3 QIPVVYNDFYDIC---VPLTHRFNGTKFSKLVHYLQRSDFSNQLDFIHSSPVRYEDIKRA 59
Query: 94 HSESYLKSLQSSPNVSIIIEVPPVALFPNC-LVQRKVLYPFRKQVGGTILAAKLAKERGW 152
H+ Y++ + + + EV + L N L++R L + GT A A E G
Sbjct: 60 HANDYVQRVATGALLRN--EVRQINLPINTQLIKRSFL-----ALNGTYTTALKALETGV 112
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLN------ISRVMIIDLDAHQGNGH 206
A + GG HH G GFC + D+ AF LN + V+I+DLD HQG+G
Sbjct: 113 ACHAAGGTHHAHYSHGSGFCVFNDL------AFTALNLIEHGMVESVLILDLDVHQGDGT 166
Query: 207 EKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHT 266
+Y + +P ++ R+ + V + N YL +L L
Sbjct: 167 IDICHGKRGIYTCSLHCEQNFP--FQKRQGT-RDVPLDCHLEDNAYLDQLHRTLADISRD 223
Query: 267 FDPELVIYNAGTDILEGDPLGMLKV 291
F P+LV+Y+AG D+ GD LG L +
Sbjct: 224 FTPQLVLYDAGVDVFLGDQLGNLDL 248
>gi|218248300|ref|YP_002373671.1| histone deacetylase superfamily protein [Cyanothece sp. PCC 8801]
gi|218168778|gb|ACK67515.1| histone deacetylase superfamily [Cyanothece sp. PCC 8801]
Length = 305
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 121/260 (46%), Gaps = 20/260 (7%)
Query: 36 PLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHS 95
P++Y P Y I H F K+ + + L S+ + I P + +VH+
Sbjct: 4 PIVYHPQY---VAPIPDEHRFPMLKFRLLYELLLSDSIAEPKNIYTPEFPELGLIELVHT 60
Query: 96 ESYLKSL-QSSPNVSII--IEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
Y+ + Q + +V I +P + LVQR ++ VGGTIL AKLA + G
Sbjct: 61 AEYINAYCQGTLDVKSQRRIGLP----WSQELVQRTLI-----AVGGTILTAKLALQYGL 111
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLN-ISRVMIIDLDAHQGNGHEKDFS 211
A N GG HH + G GFC + D+++ QL + +V+I+DLD HQG+G F
Sbjct: 112 ASNTAGGTHHAFPNYGSGFCIFNDLAIASR-VLQQLGLVKKVLIVDLDVHQGDGTAVIFE 170
Query: 212 SDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPEL 271
+D V+ + +P ++ D V + G + YL+ L + L P+L
Sbjct: 171 NDPTVFTFSLHCESNFP---AKKQQSDLDVPLPEGLDDDGYLQILAQYLPDLLSHVKPDL 227
Query: 272 VIYNAGTDILEGDPLGMLKV 291
V+Y+AG D D LG L +
Sbjct: 228 VLYDAGVDTHVSDRLGKLAL 247
>gi|386333349|ref|YP_006029518.1| deacetylase [Ralstonia solanacearum Po82]
gi|334195797|gb|AEG68982.1| Deacetylase [Ralstonia solanacearum Po82]
Length = 324
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 115/247 (46%), Gaps = 25/247 (10%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSS---PNVSI 110
H F K+ + + +++E + + E A + LL+ H+ Y+ ++ + P
Sbjct: 19 HRFPMRKYSLLRERIAAE--VPGLVLHEAPRAGDDALLLAHAPDYIDAVGAGKLDPARQR 76
Query: 111 IIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGG 170
I P + +V+R R+ G T+ A + A G A+N+ GG HH AD+GGG
Sbjct: 77 EIGFP----WSPAMVERS-----RRSAGATMAACEAAMADGIAVNLAGGTHHAYADKGGG 127
Query: 171 FCAYADISLCIHYAFVQLNISR------VMIIDLDAHQGNGHEKDFSSDSRVYILDMFNP 224
FC + D ++ + +Q R V I+DLD HQGNG D+ V+ L +
Sbjct: 128 FCVFNDAAIAARW--MQRRPGRAPEDFPVAIVDLDVHQGNGTASILRDDASVFTLSVHGE 185
Query: 225 GIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGD 284
YP EA D V + G YL+ L AL+ F P L+IY AG D EGD
Sbjct: 186 KNYPFRKEAS---DLDVGLPDGCGDAAYLEALAGALDALAARFAPCLIIYLAGADPHEGD 242
Query: 285 PLGMLKV 291
LG LK+
Sbjct: 243 RLGRLKL 249
>gi|113475495|ref|YP_721556.1| histone deacetylase superfamily protein [Trichodesmium erythraeum
IMS101]
gi|110166543|gb|ABG51083.1| histone deacetylase superfamily [Trichodesmium erythraeum IMS101]
Length = 303
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 118/263 (44%), Gaps = 22/263 (8%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LP+IY P+Y I H F +K+ + + L + N + P E + +
Sbjct: 1 MNLPVIYHPNY---VAPIPPGHRFPMAKFQLLYEMLLVDEV--TNYFLTPNFPPLEWIEL 55
Query: 93 VHSESYLKSLQSS---PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
+H +Y+K P I +P + L R + VGGTIL A+LA +
Sbjct: 56 IHHPNYIKKYCQGTLDPKAQRRIGLP----WSQALANRTCI-----AVGGTILTAQLALK 106
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKD 209
G A N GG HH G GFC + D+++ + +V+I+DLD HQG+G
Sbjct: 107 HGLACNTAGGTHHAFPSYGSGFCIFNDLAIATRVMQKLGLVEKVLIVDLDVHQGDGTAWI 166
Query: 210 FSSDSRVYILDMFNPGIYPRDYEARRFI-DQKVEVVSGTTTNEYLKKLDEALEVAGHTFD 268
F D V+ M + GI ++ +R+ + D V + G YL+ L + L
Sbjct: 167 FQDDPTVFTFSM-HCGI---NFPSRKQVSDLDVPLPEGMDDELYLQTLAQHLPYLLSEVK 222
Query: 269 PELVIYNAGTDILEGDPLGMLKV 291
P+LV+Y+AG D D LG L +
Sbjct: 223 PDLVLYDAGVDTHIHDALGKLAL 245
>gi|339492852|ref|YP_004713145.1| histone deacetylase family protein [Pseudomonas stutzeri ATCC 17588
= LMG 11199]
gi|338800224|gb|AEJ04056.1| histone deacetylase family protein [Pseudomonas stutzeri ATCC 17588
= LMG 11199]
Length = 306
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 112/259 (43%), Gaps = 12/259 (4%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LPL+Y DY + H F K+ + L + G ++ P S++ L +
Sbjct: 1 MSLPLVYHDDYSPP---LPPGHRFPMEKFRLLRDHLVTLGMTTDAALLRPSLCSRDILTL 57
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
H Y+ S + + P L QR V + VGG++LAA+ A + G
Sbjct: 58 AHDADYVARYCSGEMGRDELRRLGLPWSPE-LAQRTV-----RAVGGSLLAAEQALQHGL 111
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
A ++ GG HH D GFC + D+++ Y + RV+I D D HQG+G + +
Sbjct: 112 ACHLAGGTHHAHRDHASGFCIFNDLAVIALYLLESGRVGRVLIFDCDVHQGDGTARILEN 171
Query: 213 DSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELV 272
+ + +P + D + + G YL+ + + L + P+LV
Sbjct: 172 VPDAVTVSLHCEKNFP---TRKAHSDWDIPLPPGMGDEAYLQVVHDTLNYLLPIYQPDLV 228
Query: 273 IYNAGTDILEGDPLGMLKV 291
+Y+AG D+ D LG+L +
Sbjct: 229 LYDAGVDVHRDDALGLLSL 247
>gi|340618079|ref|YP_004736532.1| histone deacetylase [Zobellia galactanivorans]
gi|339732876|emb|CAZ96251.1| Deacetylase, histone deacetylase family [Zobellia galactanivorans]
Length = 300
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 111/260 (42%), Gaps = 18/260 (6%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
L + Y P Y S + + H F K+ + + L EG EP + + ++ VH
Sbjct: 2 LKIAYHPIYKHS---LPEGHRFPMLKYELLPKQLLHEGTCTAENFFEPEIPNDKYIVAVH 58
Query: 95 SESY---LKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
Y L +L+ S + I P L++R+ R GTI A + A E G
Sbjct: 59 EPEYFYDLLNLKISSRDARKIGFP----LTEDLIERE-----RIIADGTIQACRFAIENG 109
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A+N+ GG HH D G FC D ++ Y +++I+DLD HQGNG + F
Sbjct: 110 IAMNIAGGTHHAYTDHGEAFCMLNDQAIGARYLQAHQLAKKILIVDLDVHQGNGTAEIFG 169
Query: 212 SDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPEL 271
+D+ V+ M YP E D + + T YL L + L P+
Sbjct: 170 NDTSVFTFSMHGASNYPFKKERS---DLDIPLAKYTDDTTYLSLLKQTLPRLISEEKPDF 226
Query: 272 VIYNAGTDILEGDPLGMLKV 291
+ Y AG DI+ D LG L +
Sbjct: 227 IFYLAGVDIIGSDKLGTLAL 246
>gi|156743387|ref|YP_001433516.1| histone deacetylase superfamily protein [Roseiflexus castenholzii
DSM 13941]
gi|156234715|gb|ABU59498.1| histone deacetylase superfamily [Roseiflexus castenholzii DSM
13941]
Length = 297
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 113/258 (43%), Gaps = 16/258 (6%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+ L YS + L + + H F +K+ + + ++EG D ++ P A LL H
Sbjct: 1 MKLFYSDSF---VLPLPEGHRFPIAKYALLRERAAAEGLGD---LILPEAADDRTLLRAH 54
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLA-KERGWA 153
+ YL +++ + P+ L++R R+ VG TI A + A G+A
Sbjct: 55 TADYLHRIKTGAISDREMRQIGFPWSPH-LIERS-----RRSVGATIAACRAALSGDGFA 108
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSD 213
N+ GG HH AD G G+C + D + + + RV+IID D HQGNG + D
Sbjct: 109 ANLAGGTHHAFADHGEGYCVFNDSVIAARAMQAEGRVRRVVIIDCDVHQGNGIAAILTGD 168
Query: 214 SRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVI 273
++ + YP E D + + GT YL L+ L A +L I
Sbjct: 169 DTIFSFSIHGSRNYPFRKERS---DLDIALEDGTGDTGYLAALETGLRQAVERSRADLAI 225
Query: 274 YNAGTDILEGDPLGMLKV 291
Y AG D E D LG L +
Sbjct: 226 YLAGADPYEHDRLGRLSL 243
>gi|407647096|ref|YP_006810855.1| acetoin dehydrogenase [Nocardia brasiliensis ATCC 700358]
gi|407309980|gb|AFU03881.1| acetoin dehydrogenase [Nocardia brasiliensis ATCC 700358]
Length = 425
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 112/257 (43%), Gaps = 27/257 (10%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HP ++ S G LD ++ P A + DLL +H+ +Y+ +++ +
Sbjct: 40 HPMKPARLKFTMALAESLGLLDGVELLAPAAAERADLLRIHTPAYIDAVEHAVAPEGAPL 99
Query: 114 VPPVAL-------FPNCLVQRKVLYPFRKQVGGTILAAKLAKE--RGWAINVGGGFHHCS 164
PP L FP V+ VGGT+ AA+ E A+++GGG HH
Sbjct: 100 APPYGLGSPDNPVFPGMHQAASVI------VGGTLAAARAIAEGRSNRAVSIGGGMHHAM 153
Query: 165 ADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMF-- 222
AD GFC Y D ++ I + + R+ +D+D H G+G ++ F D RV + +
Sbjct: 154 ADSAAGFCVYNDAAVAISW-LLDHGFDRIAYLDVDVHHGDGVQRAFYGDPRVLTISVHQH 212
Query: 223 ------NPGIYPRDYEARRFIDQKVE--VVSGTTTNEYLKKLDEALEVAGHTFDPELVIY 274
N G +P + A + ++ GT ++L+ + A F P++V+
Sbjct: 213 PATLWPNTG-WPEETGAGAGEGSSINLPLLPGTRDAQWLRGFHAVVPGAVAAFRPQIVVS 271
Query: 275 NAGTDILEGDPLGMLKV 291
G D DPL L++
Sbjct: 272 QCGVDTHREDPLADLEL 288
>gi|421898145|ref|ZP_16328512.1| conserved hypothetical protein [Ralstonia solanacearum MolK2]
gi|206589351|emb|CAQ36313.1| conserved hypothetical protein [Ralstonia solanacearum MolK2]
Length = 302
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 103/220 (46%), Gaps = 23/220 (10%)
Query: 81 EPLEASKEDLLVVHSESYLKSLQSS---PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV 137
E A + LL+ H+ Y+ ++ + P I P + +V+R R+
Sbjct: 22 EAPRAGDDALLLAHAPDYIDAVGAGKLDPARQREIGFP----WSPAMVERS-----RRSA 72
Query: 138 GGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISR----- 192
G T+ A + A G A+N+ GG HH AD+GGGFC + D ++ + +Q R
Sbjct: 73 GATMAACEAAMADGIAVNLAGGTHHAYADKGGGFCVFNDAAIAALW--MQRRPGRAPGDF 130
Query: 193 -VMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNE 251
V I+DLD HQGNG D+ V+ L + YP EA D V + G
Sbjct: 131 PVAIVDLDVHQGNGTASILRDDASVFTLSVHGEKNYPFRKEAS---DLDVGLPDGCGDAA 187
Query: 252 YLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
YL+ L AL+ F P L+IY AG D EGD LG LK+
Sbjct: 188 YLEALAGALDALAARFAPRLIIYLAGADPHEGDRLGRLKL 227
>gi|326796258|ref|YP_004314078.1| histone deacetylase superfamily protein [Marinomonas mediterranea
MMB-1]
gi|326547022|gb|ADZ92242.1| histone deacetylase superfamily [Marinomonas mediterranea MMB-1]
Length = 307
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 115/264 (43%), Gaps = 26/264 (9%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+P ++ P+Y I F H F SK+ + + LS G L EP S L+ H
Sbjct: 2 IPFVFHPNYSIPF---PSNHRFPMSKFRLLAEQLSELGILTSENCFEPSPLSLTALMRAH 58
Query: 95 SESYLKSL---QSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
+ Y++ Q + I +P + LV+R + + V GTIL A+LA + G
Sbjct: 59 DKHYVQRFVRGQLTQKEEKEIGLP----WSEWLVERTL-----RAVSGTILTAELALDHG 109
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLC----IHYAFVQLNISRVMIIDLDAHQGNGHE 207
A ++ GG HH G GFC + D+++ IH + +VMI+D D HQG+G
Sbjct: 110 LACHLAGGTHHAHPSHGAGFCIFNDLAVASIDLIHRGLAK----KVMILDCDVHQGDGTV 165
Query: 208 KDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTF 267
F++ V + YP D + + G YL L E L +
Sbjct: 166 AFFTNRDDVIPVSWHCDENYPVDKHQGGV---NIALPKGADGKCYLSVLKETLPDLLLRY 222
Query: 268 DPELVIYNAGTDILEGDPLGMLKV 291
P+ V Y+AG D+ D LG L +
Sbjct: 223 SPDFVFYDAGADVHIDDRLGFLNL 246
>gi|115379349|ref|ZP_01466456.1| deacetylase [Stigmatella aurantiaca DW4/3-1]
gi|310825011|ref|YP_003957369.1| histone deacetylase family protein [Stigmatella aurantiaca DW4/3-1]
gi|115363631|gb|EAU62759.1| deacetylase [Stigmatella aurantiaca DW4/3-1]
gi|309398083|gb|ADO75542.1| Histone deacetylase family protein [Stigmatella aurantiaca DW4/3-1]
Length = 487
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 123/278 (44%), Gaps = 21/278 (7%)
Query: 18 RNRILSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKN 77
R +L K + ++P+ Y Y + F +E + + +L G +
Sbjct: 2 RAWLLDWKKRLRLDKARVPIFYDEPYRLPFGCLEAQQGLEPRQVDFTTGYLVERGIIQAE 61
Query: 78 CIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV 137
I P S L VH +YL++L+ ++ I V P + + VL R+
Sbjct: 62 DIHRPRPVSYAQLARVHDAAYLEALEEPETLASIFAVDPSEVPVD-----TVLDTVRRIC 116
Query: 138 GGTILAAK--LAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMI 195
GGT+ AA+ L+ +R A+N+ GGFHH + D GGGFC DI++ I + V +
Sbjct: 117 GGTLEAARWALSTQRP-AVNMAGGFHHAAPDHGGGFCVLNDIAVAIATLRHEGFDGPVGV 175
Query: 196 IDLDAHQGNGHEKDFSSDSRVYI--LDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYL 253
+DLDAH +G D++V++ L + G+ P E +D+ G EYL
Sbjct: 176 LDLDAHPADGTAACLEGDAQVWVGSLSGSDWGLVPGADEV--LLDR------GCGDAEYL 227
Query: 254 KKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
L+ LE L AG D+L GD G+L +
Sbjct: 228 AALEALLERMPRV---ALAFVIAGGDVLRGDRFGLLGL 262
>gi|88801602|ref|ZP_01117130.1| Histone deacetylase superfamily protein [Polaribacter irgensii
23-P]
gi|88782260|gb|EAR13437.1| Histone deacetylase superfamily protein [Polaribacter irgensii
23-P]
Length = 300
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 107/242 (44%), Gaps = 13/242 (5%)
Query: 52 KLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSII 111
K H F K+ + Q L EG + EP + + VH Y L N+++
Sbjct: 16 KGHRFPMEKYDLLPQQLLYEGTCTEENFFEPEIPNYKHFFTVHDPEYFFDLL---NITLS 72
Query: 112 IEVPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGG 169
+ FP L+ R+++ GT+ A++ A + G A+N+ GG HH ++ G
Sbjct: 73 QKAARKIGFPLSEVLIAREMMI-----ADGTMKASEYAIKNGIAMNIAGGTHHAFSNRGE 127
Query: 170 GFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPR 229
FC D ++ Y + +++I+DLD HQGNG + F +D V+ M YP
Sbjct: 128 AFCMLNDQAIGAKYLQQKGLADKILIVDLDVHQGNGTAEIFQNDRSVFTFSMHGKSNYPF 187
Query: 230 DYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGML 289
EA D + + + T YL L E L P+ + Y G D++E D LG L
Sbjct: 188 VKEAS---DLDIALENNTKDATYLTLLKETLPKLIQQEKPDFIYYLCGVDVIESDKLGKL 244
Query: 290 KV 291
+
Sbjct: 245 DL 246
>gi|320333724|ref|YP_004170435.1| histone deacetylase [Deinococcus maricopensis DSM 21211]
gi|319755013|gb|ADV66770.1| Histone deacetylase [Deinococcus maricopensis DSM 21211]
Length = 310
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 103/233 (44%), Gaps = 16/233 (6%)
Query: 66 QFLSSEGFLDKNCIVEPL-------EASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVA 118
QF+ E +LD E L E D VH +YL + +V+ E
Sbjct: 32 QFMPRETYLDMLAAAEALLPLLDAPELDWADARRVHDAAYLTRWRRG-DVTRDEERQMGF 90
Query: 119 LFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADIS 178
+ ++ R +L G T+ A A+ GW +N GGG HH D GF D+
Sbjct: 91 RWSPDIITRGLL-----SSGATLAATHDARRTGWGVNFGGGTHHAYRDHAEGFSFLNDVV 145
Query: 179 LCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFID 238
+ A +RV+I+DLD HQGNG + + R + L + YP E R +D
Sbjct: 146 ISAARALADGWATRVLILDLDVHQGNGTAAMLAGEPRAFTLSVHAERNYPFRKE-RSTLD 204
Query: 239 QKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ + GT YL+ L EA A F P+L+ Y AG D+L GD LG L +
Sbjct: 205 --LALPDGTDDAAYLRVLHEAALPAAAAFTPDLLFYLAGADVLAGDQLGRLAL 255
>gi|410094348|ref|ZP_11290785.1| histone deacetylase superfamily protein [Pseudomonas viridiflava
UASWS0038]
gi|409758219|gb|EKN43550.1| histone deacetylase superfamily protein [Pseudomonas viridiflava
UASWS0038]
Length = 305
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 117/260 (45%), Gaps = 14/260 (5%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LPLIY DY F H F K+ + L G ++ P + L +
Sbjct: 1 MSLPLIYHDDYSPEF---PADHRFPMDKFRLLRDHLIDSGLTRDVQLLRPELCPADILAL 57
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
H SY+ S ++S + + L +R + + VGG++L A+ A + G
Sbjct: 58 AHDPSYISRYLSG-DLSREDQRRLGLPWSEALARRTI-----RAVGGSLLTAEQALDHGL 111
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
A ++ GG HH D GFC + D+++ Y + +V+I D D HQG+G + +
Sbjct: 112 ACHLAGGTHHAHYDYPAGFCIFNDLAVISQYLLQSGRVDKVLIFDCDVHQGDGTARILAD 171
Query: 213 DSRVYILDMFNPGIYPRDYEARRF-IDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPEL 271
+ + +P AR+ D + + G ++YLK +D+ L + P+L
Sbjct: 172 TEDAITVSLHCEKNFP----ARKAQSDWDIPLPMGMGDSDYLKVVDDLLNYLLPIYKPDL 227
Query: 272 VIYNAGTDILEGDPLGMLKV 291
V+Y+AG D+ + D LG LK+
Sbjct: 228 VLYDAGVDVHKDDALGYLKL 247
>gi|421501962|ref|ZP_15948918.1| histone deacetylase superfamily protein [Pseudomonas mendocina
DLHK]
gi|400347246|gb|EJO95600.1| histone deacetylase superfamily protein [Pseudomonas mendocina
DLHK]
Length = 306
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 113/258 (43%), Gaps = 14/258 (5%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPL+Y DY F H F K+ + L G + P E L + H
Sbjct: 3 LPLVYHEDYSPPF---PAGHRFPMEKFRLLRDHLVDSGLTSDAELQRPELCPAEILALAH 59
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAI 154
Y+ + +S + + L +R V + VGG++L A+LA G A
Sbjct: 60 CPDYIARYMAG-ELSYEDQRRLGLPWSEALARRTV-----RAVGGSLLTAELALRHGLAC 113
Query: 155 NVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDS 214
++ GG HH D GFC + D+++ Y + RV+I D D HQG+G + +
Sbjct: 114 HLAGGTHHAHYDFPSGFCIFNDLAVIARYLLEAGRVHRVLIFDCDVHQGDGTARLLEDEP 173
Query: 215 RVYILDMFNPGIYPRDYEARRF-IDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVI 273
+ + +P AR+ D + + G +YLK +D+ L + P+LV+
Sbjct: 174 DAVTVSLHCEQNFP----ARKAQSDWDIPLPRGMGDADYLKVVDDTLNYLLPIYQPDLVL 229
Query: 274 YNAGTDILEGDPLGMLKV 291
Y+AG D+ + D LG L++
Sbjct: 230 YDAGVDVHKDDALGYLQL 247
>gi|224098178|ref|XP_002198520.1| PREDICTED: histone deacetylase 8 isoform 1 [Taeniopygia guttata]
gi|449498690|ref|XP_004177288.1| PREDICTED: histone deacetylase 8 isoform 2 [Taeniopygia guttata]
Length = 372
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 125/273 (45%), Gaps = 24/273 (8%)
Query: 31 PIFKLP---LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASK 87
P+ K+P +YSP+Y + K+ + + + + LD+ IV+P AS
Sbjct: 4 PLLKVPPPVYVYSPEYVTLCDSLCKV----PKRASMVHSLIEAYCLLDQMKIVKPKVASM 59
Query: 88 EDLLVVHSESYLKSLQ--SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGG-TILAA 144
E++ H+++YL+ LQ S E L +C + + + VGG TI AA
Sbjct: 60 EEMASFHTDAYLQHLQKVSEEGDDDHPESVEYGLGYDCPATEGI-FEYAAAVGGATITAA 118
Query: 145 K--LAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQ 202
+ L + AIN GG+HH DE GFC D L I ++ RV+ IDLD H
Sbjct: 119 ECLLDGKCKVAINWPGGWHHAKKDEASGFCYLNDAVLGI--LRLRQKFDRVLYIDLDLHH 176
Query: 203 GNGHEKDFSSDSRVYILDM--FNPGIYPRDYEAR-------RFIDQKVEVVSGTTTNEYL 253
G+G E FS S+V + + F+PG +P + R+ V + G +Y
Sbjct: 177 GDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVTDVGLGKGRYYSVNVPIQDGIQDEKYY 236
Query: 254 KKLDEALEVAGHTFDPELVIYNAGTDILEGDPL 286
+ + L+ F+P+ V+ G D + GDP+
Sbjct: 237 QICESVLKEVYAAFNPDAVVLQLGADTIAGDPM 269
>gi|15642044|ref|NP_231676.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae O1
biovar El Tor str. N16961]
gi|153820272|ref|ZP_01972939.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae NCTC
8457]
gi|153824175|ref|ZP_01976842.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae B33]
gi|227082169|ref|YP_002810720.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae
M66-2]
gi|229507869|ref|ZP_04397374.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae BX
330286]
gi|229511896|ref|ZP_04401375.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae B33]
gi|229519032|ref|ZP_04408475.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae RC9]
gi|229607414|ref|YP_002878062.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae
MJ-1236]
gi|254849129|ref|ZP_05238479.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae MO10]
gi|255745211|ref|ZP_05419160.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholera CIRS
101]
gi|262155929|ref|ZP_06029050.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae INDRE
91/1]
gi|298497930|ref|ZP_07007737.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae MAK
757]
gi|360035924|ref|YP_004937687.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae O1
str. 2010EL-1786]
gi|379741866|ref|YP_005333835.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae
IEC224]
gi|417814079|ref|ZP_12460732.1| histone deacetylase domain protein [Vibrio cholerae HC-49A2]
gi|417817817|ref|ZP_12464446.1| histone deacetylase domain protein [Vibrio cholerae HCUF01]
gi|418335058|ref|ZP_12943971.1| histone deacetylase domain protein [Vibrio cholerae HC-06A1]
gi|418338671|ref|ZP_12947565.1| histone deacetylase domain protein [Vibrio cholerae HC-23A1]
gi|418346594|ref|ZP_12951354.1| histone deacetylase domain protein [Vibrio cholerae HC-28A1]
gi|418350352|ref|ZP_12955083.1| histone deacetylase domain protein [Vibrio cholerae HC-43A1]
gi|418355888|ref|ZP_12958607.1| histone deacetylase domain protein [Vibrio cholerae HC-61A1]
gi|419827012|ref|ZP_14350511.1| histone deacetylase domain protein [Vibrio cholerae CP1033(6)]
gi|421318129|ref|ZP_15768697.1| histone deacetylase domain protein [Vibrio cholerae CP1032(5)]
gi|421321807|ref|ZP_15772360.1| histone deacetylase domain protein [Vibrio cholerae CP1038(11)]
gi|421325608|ref|ZP_15776132.1| histone deacetylase domain protein [Vibrio cholerae CP1041(14)]
gi|421333176|ref|ZP_15783653.1| histone deacetylase domain protein [Vibrio cholerae CP1046(19)]
gi|421336765|ref|ZP_15787226.1| histone deacetylase domain protein [Vibrio cholerae CP1048(21)]
gi|421340193|ref|ZP_15790625.1| histone deacetylase domain protein [Vibrio cholerae HC-20A2]
gi|421348484|ref|ZP_15798861.1| histone deacetylase domain protein [Vibrio cholerae HC-46A1]
gi|422897146|ref|ZP_16934594.1| histone deacetylase domain protein [Vibrio cholerae HC-40A1]
gi|422903345|ref|ZP_16938319.1| histone deacetylase domain protein [Vibrio cholerae HC-48A1]
gi|422907228|ref|ZP_16942031.1| histone deacetylase domain protein [Vibrio cholerae HC-70A1]
gi|422914075|ref|ZP_16948581.1| histone deacetylase domain protein [Vibrio cholerae HFU-02]
gi|422926281|ref|ZP_16959295.1| histone deacetylase domain protein [Vibrio cholerae HC-38A1]
gi|423145602|ref|ZP_17133196.1| histone deacetylase domain protein [Vibrio cholerae HC-19A1]
gi|423150278|ref|ZP_17137592.1| histone deacetylase domain protein [Vibrio cholerae HC-21A1]
gi|423154096|ref|ZP_17141277.1| histone deacetylase domain protein [Vibrio cholerae HC-22A1]
gi|423157181|ref|ZP_17144274.1| histone deacetylase domain protein [Vibrio cholerae HC-32A1]
gi|423160750|ref|ZP_17147690.1| histone deacetylase domain protein [Vibrio cholerae HC-33A2]
gi|423165576|ref|ZP_17152302.1| histone deacetylase domain protein [Vibrio cholerae HC-48B2]
gi|423768874|ref|ZP_17713020.1| histone deacetylase domain protein [Vibrio cholerae HC-50A2]
gi|423895478|ref|ZP_17727225.1| histone deacetylase domain protein [Vibrio cholerae HC-62A1]
gi|423930915|ref|ZP_17731618.1| histone deacetylase domain protein [Vibrio cholerae HC-77A1]
gi|424003030|ref|ZP_17746105.1| histone deacetylase domain protein [Vibrio cholerae HC-17A2]
gi|424006819|ref|ZP_17749789.1| histone deacetylase domain protein [Vibrio cholerae HC-37A1]
gi|424024802|ref|ZP_17764453.1| histone deacetylase domain protein [Vibrio cholerae HC-62B1]
gi|424027687|ref|ZP_17767290.1| histone deacetylase domain protein [Vibrio cholerae HC-69A1]
gi|424586963|ref|ZP_18026542.1| histone deacetylase domain protein [Vibrio cholerae CP1030(3)]
gi|424591759|ref|ZP_18031184.1| histone deacetylase domain protein [Vibrio cholerae CP1037(10)]
gi|424595611|ref|ZP_18034932.1| histone deacetylase domain protein [Vibrio cholerae CP1040(13)]
gi|424599529|ref|ZP_18038708.1| histone deacetylase domain protein [Vibrio Cholerae CP1044(17)]
gi|424602249|ref|ZP_18041390.1| histone deacetylase domain protein [Vibrio cholerae CP1047(20)]
gi|424607222|ref|ZP_18046164.1| histone deacetylase domain protein [Vibrio cholerae CP1050(23)]
gi|424611043|ref|ZP_18049882.1| histone deacetylase domain protein [Vibrio cholerae HC-39A1]
gi|424613854|ref|ZP_18052642.1| histone deacetylase domain protein [Vibrio cholerae HC-41A1]
gi|424617831|ref|ZP_18056503.1| histone deacetylase domain protein [Vibrio cholerae HC-42A1]
gi|424622615|ref|ZP_18061120.1| histone deacetylase domain protein [Vibrio cholerae HC-47A1]
gi|424645578|ref|ZP_18083314.1| histone deacetylase domain protein [Vibrio cholerae HC-56A2]
gi|424653344|ref|ZP_18090724.1| histone deacetylase domain protein [Vibrio cholerae HC-57A2]
gi|424657167|ref|ZP_18094452.1| histone deacetylase domain protein [Vibrio cholerae HC-81A2]
gi|440710238|ref|ZP_20890889.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae
4260B]
gi|443504398|ref|ZP_21071356.1| histone deacetylase domain protein [Vibrio cholerae HC-64A1]
gi|443508297|ref|ZP_21075060.1| histone deacetylase domain protein [Vibrio cholerae HC-65A1]
gi|443512139|ref|ZP_21078777.1| histone deacetylase domain protein [Vibrio cholerae HC-67A1]
gi|443515696|ref|ZP_21082207.1| histone deacetylase domain protein [Vibrio cholerae HC-68A1]
gi|443519489|ref|ZP_21085885.1| histone deacetylase domain protein [Vibrio cholerae HC-71A1]
gi|443524380|ref|ZP_21090593.1| histone deacetylase domain protein [Vibrio cholerae HC-72A2]
gi|443531976|ref|ZP_21097990.1| histone deacetylase domain protein [Vibrio cholerae HC-7A1]
gi|443535776|ref|ZP_21101653.1| histone deacetylase domain protein [Vibrio cholerae HC-80A1]
gi|443539319|ref|ZP_21105173.1| histone deacetylase domain protein [Vibrio cholerae HC-81A1]
gi|449055536|ref|ZP_21734204.1| Histone deacetylase/AcuC/AphA family protein [Vibrio cholerae O1
str. Inaba G4222]
gi|9656588|gb|AAF95190.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae O1
biovar El Tor str. N16961]
gi|126509182|gb|EAZ71776.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae NCTC
8457]
gi|126518301|gb|EAZ75526.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae B33]
gi|227010057|gb|ACP06269.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae
M66-2]
gi|229343721|gb|EEO08696.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae RC9]
gi|229351861|gb|EEO16802.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae B33]
gi|229355374|gb|EEO20295.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae BX
330286]
gi|229370069|gb|ACQ60492.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae
MJ-1236]
gi|254844834|gb|EET23248.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae MO10]
gi|255737041|gb|EET92437.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholera CIRS
101]
gi|262030240|gb|EEY48883.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae INDRE
91/1]
gi|297542263|gb|EFH78313.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae MAK
757]
gi|340036565|gb|EGQ97541.1| histone deacetylase domain protein [Vibrio cholerae HC-49A2]
gi|340037540|gb|EGQ98515.1| histone deacetylase domain protein [Vibrio cholerae HCUF01]
gi|341620789|gb|EGS46543.1| histone deacetylase domain protein [Vibrio cholerae HC-48A1]
gi|341620988|gb|EGS46740.1| histone deacetylase domain protein [Vibrio cholerae HC-70A1]
gi|341621824|gb|EGS47555.1| histone deacetylase domain protein [Vibrio cholerae HC-40A1]
gi|341637299|gb|EGS61987.1| histone deacetylase domain protein [Vibrio cholerae HFU-02]
gi|341646063|gb|EGS70181.1| histone deacetylase domain protein [Vibrio cholerae HC-38A1]
gi|356417082|gb|EHH70701.1| histone deacetylase domain protein [Vibrio cholerae HC-06A1]
gi|356418270|gb|EHH71873.1| histone deacetylase domain protein [Vibrio cholerae HC-21A1]
gi|356422816|gb|EHH76285.1| histone deacetylase domain protein [Vibrio cholerae HC-19A1]
gi|356428656|gb|EHH81882.1| histone deacetylase domain protein [Vibrio cholerae HC-22A1]
gi|356430313|gb|EHH83522.1| histone deacetylase domain protein [Vibrio cholerae HC-23A1]
gi|356432899|gb|EHH86094.1| histone deacetylase domain protein [Vibrio cholerae HC-28A1]
gi|356439455|gb|EHH92424.1| histone deacetylase domain protein [Vibrio cholerae HC-32A1]
gi|356444848|gb|EHH97657.1| histone deacetylase domain protein [Vibrio cholerae HC-43A1]
gi|356445491|gb|EHH98295.1| histone deacetylase domain protein [Vibrio cholerae HC-33A2]
gi|356450597|gb|EHI03314.1| histone deacetylase domain protein [Vibrio cholerae HC-48B2]
gi|356452386|gb|EHI05065.1| histone deacetylase domain protein [Vibrio cholerae HC-61A1]
gi|356647078|gb|AET27133.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae O1
str. 2010EL-1786]
gi|378795376|gb|AFC58847.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae
IEC224]
gi|395916387|gb|EJH27217.1| histone deacetylase domain protein [Vibrio cholerae CP1032(5)]
gi|395917446|gb|EJH28274.1| histone deacetylase domain protein [Vibrio cholerae CP1041(14)]
gi|395918801|gb|EJH29625.1| histone deacetylase domain protein [Vibrio cholerae CP1038(11)]
gi|395928578|gb|EJH39331.1| histone deacetylase domain protein [Vibrio cholerae CP1046(19)]
gi|395931864|gb|EJH42608.1| histone deacetylase domain protein [Vibrio cholerae CP1048(21)]
gi|395939476|gb|EJH50158.1| histone deacetylase domain protein [Vibrio cholerae HC-20A2]
gi|395943063|gb|EJH53739.1| histone deacetylase domain protein [Vibrio cholerae HC-46A1]
gi|395958647|gb|EJH69126.1| histone deacetylase domain protein [Vibrio cholerae HC-56A2]
gi|395959239|gb|EJH69682.1| histone deacetylase domain protein [Vibrio cholerae HC-57A2]
gi|395961942|gb|EJH72251.1| histone deacetylase domain protein [Vibrio cholerae HC-42A1]
gi|395970729|gb|EJH80469.1| histone deacetylase domain protein [Vibrio cholerae HC-47A1]
gi|395972960|gb|EJH82534.1| histone deacetylase domain protein [Vibrio cholerae CP1030(3)]
gi|395975395|gb|EJH84886.1| histone deacetylase domain protein [Vibrio cholerae CP1047(20)]
gi|408007037|gb|EKG45148.1| histone deacetylase domain protein [Vibrio cholerae HC-39A1]
gi|408012616|gb|EKG50391.1| histone deacetylase domain protein [Vibrio cholerae HC-41A1]
gi|408030652|gb|EKG67306.1| histone deacetylase domain protein [Vibrio cholerae CP1037(10)]
gi|408031991|gb|EKG68591.1| histone deacetylase domain protein [Vibrio cholerae CP1040(13)]
gi|408041546|gb|EKG77652.1| histone deacetylase domain protein [Vibrio Cholerae CP1044(17)]
gi|408042813|gb|EKG78846.1| histone deacetylase domain protein [Vibrio cholerae CP1050(23)]
gi|408053174|gb|EKG88194.1| histone deacetylase domain protein [Vibrio cholerae HC-81A2]
gi|408607802|gb|EKK81205.1| histone deacetylase domain protein [Vibrio cholerae CP1033(6)]
gi|408633618|gb|EKL05943.1| histone deacetylase domain protein [Vibrio cholerae HC-50A2]
gi|408654347|gb|EKL25489.1| histone deacetylase domain protein [Vibrio cholerae HC-77A1]
gi|408655278|gb|EKL26403.1| histone deacetylase domain protein [Vibrio cholerae HC-62A1]
gi|408845427|gb|EKL85543.1| histone deacetylase domain protein [Vibrio cholerae HC-37A1]
gi|408845564|gb|EKL85679.1| histone deacetylase domain protein [Vibrio cholerae HC-17A2]
gi|408870259|gb|EKM09539.1| histone deacetylase domain protein [Vibrio cholerae HC-62B1]
gi|408878990|gb|EKM17983.1| histone deacetylase domain protein [Vibrio cholerae HC-69A1]
gi|439974461|gb|ELP50638.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae
4260B]
gi|443431343|gb|ELS73895.1| histone deacetylase domain protein [Vibrio cholerae HC-64A1]
gi|443435239|gb|ELS81383.1| histone deacetylase domain protein [Vibrio cholerae HC-65A1]
gi|443439122|gb|ELS88837.1| histone deacetylase domain protein [Vibrio cholerae HC-67A1]
gi|443443106|gb|ELS96408.1| histone deacetylase domain protein [Vibrio cholerae HC-68A1]
gi|443446907|gb|ELT03563.1| histone deacetylase domain protein [Vibrio cholerae HC-71A1]
gi|443449714|gb|ELT10005.1| histone deacetylase domain protein [Vibrio cholerae HC-72A2]
gi|443457366|gb|ELT24763.1| histone deacetylase domain protein [Vibrio cholerae HC-7A1]
gi|443461052|gb|ELT32126.1| histone deacetylase domain protein [Vibrio cholerae HC-80A1]
gi|443465419|gb|ELT40079.1| histone deacetylase domain protein [Vibrio cholerae HC-81A1]
gi|448264575|gb|EMB01812.1| Histone deacetylase/AcuC/AphA family protein [Vibrio cholerae O1
str. Inaba G4222]
Length = 306
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 116/268 (43%), Gaps = 28/268 (10%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKW---GRICQFLSSEGFLDKNCIVEPLEASKEDLL 91
+PLIY P Y L + +P + + + Q SE + P+ A +
Sbjct: 2 IPLIYHPIYSQLDLPVGHRYPINKYRLLYEEIVRQREQSEAWQASFEFHTPIAAELSRIT 61
Query: 92 VVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRK--------QVGGTILA 143
+H Y+++L + R++ +P+ K VGGT L
Sbjct: 62 RLHDPDYVQALLEGT--------------LSAAKMRRIGFPWSKPLIERTLYSVGGTCLT 107
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQG 203
+ A + G AI++ GG+HH AD G GFC + D+++ H+A ++ +V+IID D H G
Sbjct: 108 VEQALQSGVAIHLSGGYHHAHADFGSGFCLFNDLAIAAHFALSLPSVDKVLIIDSDVHHG 167
Query: 204 NGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVA 263
+G + + L +P A V + T E+L + +E+A
Sbjct: 168 DGTATLCAERDEIITLSFHCDKNFPARKPASSM---DVGYANQTGDEEFLSTFIQVVEMA 224
Query: 264 GHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ P+L++Y+AG DI D LG L +
Sbjct: 225 VNLHRPDLILYDAGVDIHNDDELGYLSI 252
>gi|440683109|ref|YP_007157904.1| Histone deacetylase [Anabaena cylindrica PCC 7122]
gi|428680228|gb|AFZ58994.1| Histone deacetylase [Anabaena cylindrica PCC 7122]
Length = 305
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 121/263 (46%), Gaps = 24/263 (9%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LP++Y DY I+ L + H F SK+ ++ + L ++ P E + +VH
Sbjct: 3 LPIVYHLDY-IAPLPLG--HRFPMSKFSQLHELLLADRVAHSEQFHIPERPQTELIELVH 59
Query: 95 SESYLK-----SLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
+ +Y++ +L+S I + P + C+ +GGTIL A+LA
Sbjct: 60 TPNYVQAYCQGTLESKAQRRIGLPWSPALVNRTCVA-----------LGGTILTAQLALN 108
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISR-VMIIDLDAHQGNGHEK 208
G A N GG HH D G GFC + D+++ +L +++ ++I+DLD HQG+G
Sbjct: 109 HGLACNTAGGTHHAFPDYGSGFCIFNDLAVASR-VIQKLGLAKNILIVDLDVHQGDGTAF 167
Query: 209 DFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFD 268
F +D+ V+ M +P ++ D + + G YL+ L L
Sbjct: 168 IFHNDNSVFTFSMHCEDNFP---GTKQKSDLDIPLPLGMEDEAYLQTLANYLPDLLSQIK 224
Query: 269 PELVIYNAGTDILEGDPLGMLKV 291
P+LV Y+AG D D LG L +
Sbjct: 225 PDLVFYDAGVDTHINDKLGKLAL 247
>gi|325103759|ref|YP_004273413.1| histone deacetylase [Pedobacter saltans DSM 12145]
gi|324972607|gb|ADY51591.1| Histone deacetylase [Pedobacter saltans DSM 12145]
Length = 300
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 108/241 (44%), Gaps = 15/241 (6%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESY---LKSLQSSPNVSI 110
H F K+ I Q L G + EP ++E +L+ HS Y LKSL S +
Sbjct: 18 HRFPMLKYELIPQQLIRRGIAREENFFEPEILNEEIVLLTHSNEYWNKLKSLSLSYHEER 77
Query: 111 IIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGG 170
I P LV+R++ + GTI +A A + G + N GG HH +D G G
Sbjct: 78 RIGFP----LSERLVKREL-----RICRGTIDSALYAIDYGVSFNSAGGTHHAGSDWGEG 128
Query: 171 FCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRD 230
FC D ++ +Y + ++IIDLD HQGNG + F+ + V+ + +P
Sbjct: 129 FCLLNDQAIAANYLIDSQISNSILIIDLDVHQGNGTAEIFADNDAVFTFSIHGEKNFPFR 188
Query: 231 YEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLK 290
E D V G EY L E LE A P+++ Y AG D+L D LG L
Sbjct: 189 KEKS---DLDVASPDGIEDEEYQDILVENLEKAICLSSPDMIFYQAGVDVLSTDKLGKLS 245
Query: 291 V 291
+
Sbjct: 246 L 246
>gi|153827202|ref|ZP_01979869.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae
MZO-2]
gi|149738887|gb|EDM53215.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae
MZO-2]
Length = 306
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 120/268 (44%), Gaps = 28/268 (10%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSK--WGRI-CQFLSSEGFLDKNCIVEPLEASKEDLL 91
+PLIY P Y L + +P + + + I Q SE + P+ A +
Sbjct: 2 IPLIYHPIYSQLDLPVGHRYPINKYRLLYEEIERQREQSEVWQASFEFHTPIAAELSRIT 61
Query: 92 VVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRK--------QVGGTILA 143
+H Y+++L ++P + R++ +P+ K VGGT L
Sbjct: 62 RLHDPDYVQALLEG-------KLPAAKM-------RRIGFPWSKPLIERTLYSVGGTCLT 107
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQG 203
+ A + G AI++ GG+HH AD G GFC + D+++ H+A ++ +V+IID D H G
Sbjct: 108 VEQALQSGVAIHLSGGYHHAHADFGSGFCLFNDLAIAAHFALSLPSVDKVLIIDSDVHHG 167
Query: 204 NGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVA 263
+G + + L +P A V + T E+L + +E+A
Sbjct: 168 DGTATLCAERDDIITLSFHCDKNFPARKPASSM---DVGFANQTGDEEFLSTFIQVVEMA 224
Query: 264 GHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ P+L++Y+AG DI D LG L +
Sbjct: 225 VNLHQPDLILYDAGVDIHNDDELGYLSI 252
>gi|441209584|ref|ZP_20974269.1| histone deacetylase-like amidohydrolase [Mycobacterium smegmatis
MKD8]
gi|440627075|gb|ELQ88895.1| histone deacetylase-like amidohydrolase [Mycobacterium smegmatis
MKD8]
Length = 369
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 106/249 (42%), Gaps = 31/249 (12%)
Query: 63 RICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPN 122
R+ + G +D+ + P AS+EDLL VH +Y+ ++
Sbjct: 47 RMAGLVEVSGMIDELIRIAPRTASREDLLRVHDAAYIDRIERESA-------------DR 93
Query: 123 CLVQRKVLYPF--------RKQVGGTILAAKL----AKERGWAINVGGGFHHCSADEGGG 170
PF R GGTI AA+ A + +A+ G HH D G G
Sbjct: 94 GGDGGDGFTPFGPGSYDIARLAAGGTIAAAEAVLTGAADNAYALVRPPG-HHARRDTGMG 152
Query: 171 FCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRD 230
FC ++++ + I YA L + RV I+D D H GNG E + DS V + + ++P+D
Sbjct: 153 FCIFSNVCVAIEYARAHLGVQRVAIVDYDVHHGNGAESIYWDDSDVLTISLHQDRLFPQD 212
Query: 231 YEA-----RRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDP 285
A + V + +G+ YL ++ A F P+++ ++G D DP
Sbjct: 213 TGAVTDTGASGTNINVPLHAGSGNGAYLAAIERVAVPAVTAFAPDIIFVSSGFDPSPVDP 272
Query: 286 LGMLKVKWG 294
LG + V G
Sbjct: 273 LGCMTVTSG 281
>gi|254502902|ref|ZP_05115053.1| Histone deacetylase family, putative [Labrenzia alexandrii DFL-11]
gi|222438973|gb|EEE45652.1| Histone deacetylase family, putative [Labrenzia alexandrii DFL-11]
Length = 313
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 109/268 (40%), Gaps = 30/268 (11%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LP+++ P Y + H F K+ + + +EG L P A E + +
Sbjct: 1 MTLPIVHHPAY---CADLPANHRFPMDKFRAVADLIRAEGLLGSGDFYRPRPAPFEWVAL 57
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTILAA 144
H Y+ + ++ EVP + R++ +P R + GG++L
Sbjct: 58 AHDPVYVDQVFNA-------EVPQK-------IAREIGFPMRADIALRARCATGGSVLTG 103
Query: 145 KLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
LA E G A N GG HH G GFC + D+++ + I + ++IDLD HQG+
Sbjct: 104 YLALEHGLACNTAGGSHHARRAHGAGFCVFNDVAVALKVLQADGAIRKALVIDLDVHQGD 163
Query: 205 GHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQ-KVEVVSGTTTNEYLKKLDEALEVA 263
G FS D ++ M + YP R+ + + YL L E L
Sbjct: 164 GTADIFSGDPDIFTFSMHSAKNYP----VRKVPSHLDLALPDAMEDAAYLTALQEVLPDL 219
Query: 264 GHTFDPELVIYNAGTDILEGDPLGMLKV 291
+LV YNAG D D LG L +
Sbjct: 220 LRQEAWDLVFYNAGVDPYFEDRLGRLAL 247
>gi|392533893|ref|ZP_10281030.1| histone deacetylase superfamily protein [Pseudoalteromonas arctica
A 37-1-2]
Length = 297
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 102/213 (47%), Gaps = 13/213 (6%)
Query: 81 EPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFP--NCLVQRKVLYPFRKQVG 138
EP + + L + HS+ Y+ N ++ + FP LV+R +L +G
Sbjct: 44 EPKKVTVSQLALCHSQRYIDDF---LNGTLSDKAIKKMGFPYSQQLVERTLL-----SIG 95
Query: 139 GTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDL 198
G+I AA+ A N+ GG+HH +D G GFC + D+++ + V+I D
Sbjct: 96 GSIQAAEAAFSHDLTFNLSGGYHHSHSDFGSGFCIFNDLAIAAAHLINTEQADTVLIFDC 155
Query: 199 DAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDE 258
D HQG+G + + +++ + +PR+ + + + + T +EYL L +
Sbjct: 156 DVHQGDGTAQITQNHNQIITCSIHCEQNFPRNKQESTY---DFALPAKTADDEYLATLKQ 212
Query: 259 ALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
AL+ +P++++YNAG DI D LG+ +
Sbjct: 213 ALDFCVRIHNPDIILYNAGADIYTKDELGLFNI 245
>gi|301298973|gb|ADK66830.1| putative histone deacetylase superfamily protein [Amphidinium
carterae]
Length = 337
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 105/239 (43%), Gaps = 11/239 (4%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ + + L E D + PL E LV H +Y++S+ S S +
Sbjct: 59 HRFPIEKYAMVKEILVKE--QDLEVLDGPLATLSETELV-HDAAYVQSISSG---SASEQ 112
Query: 114 VPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG-WAINVGGGFHHCSADEGGGFC 172
F + VL F VG T+ A + E G W+ V GG HH A G GFC
Sbjct: 113 TRKRVGFSEAPMLPYVLRSF-ASVGATLAATRNCLESGVWSGAVSGGTHHAFASSGEGFC 171
Query: 173 AYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYE 232
+ DI++ A V I ++++DLD HQGNG F D V+ + YP +
Sbjct: 172 VFNDIAVAARLAAVDYGIKSMLVVDLDVHQGNGTAGIFKDDPNVFTFSVHQAKGYP--FS 229
Query: 233 ARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
R D + + G + Y++ L +AL PELV Y +G D L GD G L +
Sbjct: 230 TRCASDIDIGLHDGCEDDVYMESL-QALPAVFDRCRPELVFYQSGVDGLRGDRFGRLAL 287
>gi|308273423|emb|CBX30025.1| hypothetical protein N47_D28340 [uncultured Desulfobacterium sp.]
Length = 360
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 112/251 (44%), Gaps = 22/251 (8%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HP + I L + K ++P EA++E+L +H+ Y+ + S+ S ++
Sbjct: 30 HPESPHRLETIYSMLEEKDMAGKFVAIKPREATREELGYIHTAEYISRVASTKTRSKVML 89
Query: 114 VPPVALFPNCLVQRKVLYPFRKQVGGTI-LAAKLAKERGWAINVGGGF-----HHCSADE 167
P P + +L GG + L L +++ I+ G F HH AD
Sbjct: 90 DPDTYTSPGSW-EAAIL-----AAGGVLELIDNLMEKK---IDNGFAFLRPPGHHAEADR 140
Query: 168 GGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIY 227
GFC + +I++ YA + N+ R++IID D H GNG ++ F +D +V Y
Sbjct: 141 AMGFCLFNNIAIGAKYAIEKYNLDRILIIDWDIHHGNGTQRSFYNDPQVLYFSTHQYPYY 200
Query: 228 PRDYEARRFIDQK-------VEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDI 280
P + K + + SG +EY E L+ F P+L++ +AG DI
Sbjct: 201 PGTGGVNELGEGKGKGFTINIPLSSGVGDDEYAGIFMEILKPVAFEFKPQLILVSAGFDI 260
Query: 281 LEGDPLGMLKV 291
DPLG +++
Sbjct: 261 YIDDPLGGMEI 271
>gi|386019455|ref|YP_005937479.1| histone deacetylase family protein [Pseudomonas stutzeri DSM 4166]
gi|327479427|gb|AEA82737.1| histone deacetylase family protein [Pseudomonas stutzeri DSM 4166]
Length = 306
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 112/259 (43%), Gaps = 12/259 (4%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LPL+Y DY + H F K+ + L + G ++ P S++ L +
Sbjct: 1 MSLPLVYHDDYSPP---LPPGHRFPMEKFRLLRDHLVTLGMTTDAALLRPSLCSRDILTL 57
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
H Y+ S + + P L QR V + VGG++LAA+ A + G
Sbjct: 58 AHDADYVARYCSGEMGRDELRRLGLPWSPE-LAQRTV-----RAVGGSLLAAEQALQHGL 111
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
A ++ GG HH D GFC + D+++ Y + RV+I D D HQG+G + +
Sbjct: 112 ACHLAGGTHHAHRDHASGFCIFNDLAVIALYLLESGRVGRVLIFDCDVHQGDGTARILEN 171
Query: 213 DSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELV 272
+ + +P + D + + G YL+ + + L + P+LV
Sbjct: 172 VPDAVTVSLHCEKNFP---TRKADSDWDIPLPPGMGDEAYLQVVHDTLNYLLPIYQPDLV 228
Query: 273 IYNAGTDILEGDPLGMLKV 291
+Y+AG D+ D LG+L +
Sbjct: 229 LYDAGVDVHRDDALGLLSL 247
>gi|392546013|ref|ZP_10293150.1| histone deacetylase superfamily protein [Pseudoalteromonas rubra
ATCC 29570]
Length = 308
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 118/267 (44%), Gaps = 36/267 (13%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNC---IVEP-LEASKEDLLV 92
L Y P Y S L + H F K+ + Q L L C + +P L AS + +
Sbjct: 2 LFYHPSY--SALPLPPKHRFPIDKYRLLYQQL-----LQTPCASWLTQPNLVASPAHITL 54
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQ--------VGGTILAA 144
H Y+ + + P+ V+R + +P+ +Q VG + A
Sbjct: 55 CHEPEYVTAFLN-------------GTLPDGAVKR-MGFPWSEQLVERTLCSVGAALEAV 100
Query: 145 KLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
+LA G+A N+ GG+HH +D GFC + D+++ Y + V+++D D HQG+
Sbjct: 101 QLALSDGFAANLSGGYHHAFSDRAAGFCIFNDLAIAARYLIQTGQVDTVLLLDCDVHQGD 160
Query: 205 GHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAG 264
G + + D+++ + +P+ +R D + + YL L +AL +
Sbjct: 161 GSAEILADDTQIITCSLHCEQNFPK---LKRQSDYDFALPVDCSDATYLATLHDALSLCT 217
Query: 265 HTFDPELVIYNAGTDILEGDPLGMLKV 291
P++++YNAG DI D LG L V
Sbjct: 218 RLHQPDIILYNAGADIFRLDELGHLAV 244
>gi|359786041|ref|ZP_09289183.1| histone deacetylase [Halomonas sp. GFAJ-1]
gi|359296636|gb|EHK60882.1| histone deacetylase [Halomonas sp. GFAJ-1]
Length = 304
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 116/261 (44%), Gaps = 14/261 (5%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
L +++ P Y I + HPF K+ + Q L + + P A L
Sbjct: 1 MALTVVHHPGYTID---LPANHPFPMEKFRLLRQLLGEQSLACPIEWLTPEPAPINTLAR 57
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
VH+ YL + ++ E + LV+R R + GGT+L + A G
Sbjct: 58 VHTRDYLNAFLQG-RLARAAERRSGFAWSEALVER-----VRLETGGTLLTLEAALTSGL 111
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
A N GG HH AD G+C D+++ +A + RV+I+D D HQG+G + F++
Sbjct: 112 ACNSAGGTHHAHADAASGYCLINDLAVAAAHALALGWVERVLIVDCDVHQGDGTARLFAN 171
Query: 213 DSRVYILDMFNPGIYPRDYEARRFI-DQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPEL 271
V+ M R++ AR+ D V + +G + YL +L L + P+
Sbjct: 172 VPGVFTFSMHA----ARNFPARKATSDLDVALPTGMGDDAYLAELASWLPGILAAYQPDA 227
Query: 272 VIYNAGTDILEGDPLGMLKVK 292
V+Y+AG D+ + D LG L +
Sbjct: 228 VLYDAGVDVHQDDRLGYLALS 248
>gi|341616230|ref|ZP_08703099.1| hypothetical protein CJLT1_14807 [Citromicrobium sp. JLT1363]
Length = 320
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 86/174 (49%), Gaps = 11/174 (6%)
Query: 126 QRKVLYPF--------RKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADI 177
+R++ +P R GGT LAA+LA E G+A N G HH D G GFC + D+
Sbjct: 64 ERRIGFPVTPHIASRVRHTNGGTWLAAQLAMEHGYAANSAAGSHHALYDTGAGFCVFNDL 123
Query: 178 SLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFI 237
++C + + RV+I+D D HQG+G + ++ + +P +AR +
Sbjct: 124 AVCANRLIGEAQADRVLIVDCDVHQGDGTASLTAGRDDIFTFSIHAEKNFPV-RKARSSL 182
Query: 238 DQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
D + + GT ++YL LD L F P++V+Y AG D D LG L +
Sbjct: 183 D--IGLPDGTGDDDYLAVLDAHLPRLLDDFAPDIVLYQAGVDPHANDKLGRLAL 234
>gi|153831403|ref|ZP_01984070.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae
623-39]
gi|148873114|gb|EDL71249.1| histone deacetylase/AcuC/AphA family protein [Vibrio cholerae
623-39]
Length = 306
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 116/268 (43%), Gaps = 28/268 (10%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKW---GRICQFLSSEGFLDKNCIVEPLEASKEDLL 91
+PLIY P Y L + +P + + + Q SE + P+ A +
Sbjct: 2 IPLIYHPIYSQLDLPVGHRYPINKYRLLYEEIVRQREQSEAWQASFEFHTPIAAELSRIT 61
Query: 92 VVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRK--------QVGGTILA 143
+H Y+++L + R++ +P+ K VGGT L
Sbjct: 62 PLHDPDYVQALLEGTL--------------SAAKMRRIGFPWSKPLIERTLYSVGGTCLT 107
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQG 203
+ A + G AI++ GG+HH AD G GFC + D+++ H+A ++ +V+IID D H G
Sbjct: 108 VEQALQSGVAIHLSGGYHHAHADFGSGFCLFNDLAIAAHFALSLPSVDKVLIIDSDVHHG 167
Query: 204 NGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVA 263
+G + + L +P A V + T E+L + +E+A
Sbjct: 168 DGTATLCAERDDIITLSFHCDKNFPARKPASSM---DVGFANQTGDEEFLSTFIQVVEMA 224
Query: 264 GHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ P+L++Y+AG DI D LG L +
Sbjct: 225 VNLHRPDLILYDAGVDIHNDDELGYLSI 252
>gi|452995875|emb|CCQ92264.1| protein deacetylase [Clostridium ultunense Esp]
Length = 378
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 112/256 (43%), Gaps = 25/256 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVS-III 112
HPF+ + + G +D++ I P A+ E+L ++H Y+++++ + +S +
Sbjct: 22 HPFNQKRLELTLSLIRELGLIDESQIQSPRMATDEELTLIHEPYYIEAVKKAGEMSGSFL 81
Query: 113 EVP------PVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKER--GWAINVGGGFHHCS 164
+P V +FP + VGG ++AA E+ A+++GGG HH
Sbjct: 82 GLPYGLGTEDVPIFPGMHEASAL------SVGGALVAADYVMEKPGRHALHLGGGLHHAF 135
Query: 165 ADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNP 224
GFC Y D S+ I Y + +RV+ +D DAH G+G + F DS V L
Sbjct: 136 RGRASGFCVYNDCSVAIAYVREKYR-ARVLYVDTDAHHGDGVQWAFYQDSDVMTLSFHET 194
Query: 225 G---------IYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYN 275
G IY R + V + T + YL+ + +E A F P+L+
Sbjct: 195 GKYLFPGTGNIYERGEGEGYGLSLNVPLEPFTEDDSYLEAYERVIEKAIRFFKPDLLFTQ 254
Query: 276 AGTDILEGDPLGMLKV 291
G D DPL L V
Sbjct: 255 NGADAHRYDPLTHLSV 270
>gi|255083386|ref|XP_002504679.1| histone deacetylase [Micromonas sp. RCC299]
gi|226519947|gb|ACO65937.1| histone deacetylase [Micromonas sp. RCC299]
Length = 293
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 107/237 (45%), Gaps = 13/237 (5%)
Query: 54 HPFDSSKWGRICQFLSSEGFL--DKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSII 111
H F + I + L EG KN S E+L VH E Y+
Sbjct: 5 HRFPMPVFREIYRRLLREGVAVPGKNLFQPARMPSLEELTAVHDEEYVNKFMIGAMSDE- 63
Query: 112 IEVPPVAL-FPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGG 170
E+ + L + LV+R + +V GT+L A LA G A+N GG HH G
Sbjct: 64 -ELRRMGLPWTEDLVERTL-----SEVSGTMLCADLALTCGLAVNTAGGTHHAHRSHASG 117
Query: 171 FCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRD 230
+C + D+++ + + RV+I+DLD HQG+G ++D +Y L + +P
Sbjct: 118 YCIFNDLAVTAKRVIARGAVERVLIVDLDVHQGDGTASTTAADPGIYTLSVHCEDNFP-- 175
Query: 231 YEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLG 287
+ + V + +GT + Y+K + AL + P+LV+Y+AG D+ D LG
Sbjct: 176 -AKKSTSSRDVALPTGTGDDAYIKTTEAALRESIEEHGPQLVLYDAGVDVHGADDLG 231
>gi|363420376|ref|ZP_09308468.1| acetoin utilization protein [Rhodococcus pyridinivorans AK37]
gi|359735618|gb|EHK84575.1| acetoin utilization protein [Rhodococcus pyridinivorans AK37]
Length = 423
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 121/275 (44%), Gaps = 26/275 (9%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
+++SPDY G HP + ++ S G L+ V P A DLL +H+
Sbjct: 20 VVWSPDYLDYRWG--PTHPMNPTRLDLTMALSRSLGLLEGVETVRPSPADDTDLLRIHTS 77
Query: 97 SYLKSLQ---SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV-----GGTILAAK-LA 147
SY+ +++ S+P + PP + ++P + GGT+ AA+ +A
Sbjct: 78 SYVDAVKRAGSAPEGA----APPADAPHGLGTEDNPIFPRMHEASATLAGGTLAAAREIA 133
Query: 148 KERGW-AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
R A+++GGG HH AD GFC Y D ++ I + + R+ ID+DAH G+G
Sbjct: 134 SGRARRAVSIGGGMHHAMADWAAGFCVYNDAAIAISW-LLDHGYDRIAYIDVDAHHGDGV 192
Query: 207 EKDFSSDSRVYILDMF-NPG-IYPRDYEARRFIDQKVE-------VVSGTTTNEYLKKLD 257
+ F D RV + + +P ++P + E V+ GT +L+
Sbjct: 193 QHAFLGDPRVLTISLHQHPATLWPNTGWSSEVGSGPAEGTAINLPVLPGTVDALWLRAFH 252
Query: 258 EALEVAGHTFDPELVIYNAGTDILEGDPLGMLKVK 292
+ A F P+++I G D DPL L +
Sbjct: 253 AVVPGAVAAFRPQILISQCGADSHREDPLADLSLT 287
>gi|170055055|ref|XP_001863409.1| histone deacetylase 19 [Culex quinquefasciatus]
gi|167875153|gb|EDS38536.1| histone deacetylase 19 [Culex quinquefasciatus]
Length = 402
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 112/244 (45%), Gaps = 32/244 (13%)
Query: 66 QFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNV----SIIIEVPPVALFP 121
+ ++S G LDK V P + S DLL+ HS Y+ L+ S V + E+ +
Sbjct: 63 ELIASYGLLDKCHTVNPPKCSSSDLLIFHSSDYVDFLKRSNQVDDLNEVTEELEEFGIAY 122
Query: 122 NC-LVQRKVLYPFRKQVGGTILAAKLAKERG--WAINVGGGFHHCSADEGGGFCAYADIS 178
+C L+ R +Y F QV G+ +AA A G +AIN GG+HH D+ GFC DI
Sbjct: 123 DCPLIDR--IYDFVTQVAGSSMAAVDAVLNGAKFAINWSGGWHHAQRDKASGFCYVNDIV 180
Query: 179 LCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILD--MFNPGIYP-------- 228
+ I + ++ +V+ IDLD H G+G E F S V + + G +P
Sbjct: 181 IGI--SKLRSKFQKVLYIDLDVHHGDGVENAFCSSKYVMTVSTHLHEAGYFPGTGNVTDI 238
Query: 229 -----RDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEG 283
R Y D+ +SG Y ++ +A+ TF P + + G D++ G
Sbjct: 239 GIGAGRGYTVNAPYDRD---ISGEMFVPYFTEIAQAVY---ETFRPNVCVIQCGGDVISG 292
Query: 284 DPLG 287
D LG
Sbjct: 293 DHLG 296
>gi|428176853|gb|EKX45735.1| hypothetical protein GUITHDRAFT_70985 [Guillardia theta CCMP2712]
Length = 342
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 127/267 (47%), Gaps = 26/267 (9%)
Query: 34 KLPLIYSPDY-DISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNC-IVE---PLEASKE 88
KLP++ P Y D+ + H F SK+G + + S L + +VE P+ AS
Sbjct: 25 KLPVVSHPGYGDVE--NWDPKHRFVMSKFGGMRNVIESTMHLREEVEVVEDFAPVSAST- 81
Query: 89 DLLVVHSESYLKSL---QSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK 145
L +VH +++ + P I +P + LV+R +L +V GT +AA+
Sbjct: 82 -LCLVHDRKFVEDFCEGKMDPRAMRRIGLP----WSPSLVRRTLL-----EVQGTTIAAR 131
Query: 146 LAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
LA ER A N GG HH AD G GF + D+++ + + RV+I+DLD HQG+G
Sbjct: 132 LALERRLACNAAGGTHHSFADYGSGFTIFNDLAVTAAWLRDERLAKRVLILDLDVHQGDG 191
Query: 206 HEKDFSSDSRVYILDMFNPGIYP-RDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAG 264
+ + V + + +P R ++ D V + +YL +L + L
Sbjct: 192 TAAIHAGNPDVMTVSVHCESNFPFRKQQS----DLDVALEDEVGDRDYLLRLSQFLPSLL 247
Query: 265 HTFDPELVIYNAGTDILEGDPLGMLKV 291
F P++V+Y+AG D+ D LG L +
Sbjct: 248 ADFKPDIVLYDAGVDVHADDELGKLHI 274
>gi|332706616|ref|ZP_08426677.1| putative deacetylase [Moorea producens 3L]
gi|332354500|gb|EGJ33979.1| putative deacetylase [Moorea producens 3L]
Length = 283
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 109/236 (46%), Gaps = 17/236 (7%)
Query: 60 KWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSS---PNVSIIIEVPP 116
K+G++ Q L E P E L +VH+ +Y+++ P I +P
Sbjct: 3 KFGKLYQLLLQEDIATPKQFHTPDLPPLEWLHLVHTPAYVQAYYEGTLDPKAVRRIGLP- 61
Query: 117 VALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYAD 176
+ LV+R VGGTIL AKLA +G A N GG HH + G GFC + D
Sbjct: 62 ---WSPALVKRTC-----TAVGGTILTAKLALSQGLACNTAGGTHHAFPNYGSGFCIFND 113
Query: 177 ISLCIHYAFVQLN-ISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARR 235
+++ QL + +++I+DLD HQG+G F ++ V+ M +P ++
Sbjct: 114 LAIASR-VLQQLGLVQKILIVDLDVHQGDGTAFIFQNEHSVFTFSMHCEVNFP---SKKQ 169
Query: 236 FIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
D + + G + YL+ L + L F P LV+Y+AG D D LG L +
Sbjct: 170 KSDLDIPLPEGMDDDAYLQTLAKYLPDLLSGFKPNLVLYDAGVDPHVEDHLGKLAL 225
>gi|359442098|ref|ZP_09231977.1| histone deacetylase family protein [Pseudoalteromonas sp. BSi20429]
gi|358036038|dbj|GAA68226.1| histone deacetylase family protein [Pseudoalteromonas sp. BSi20429]
Length = 297
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 102/213 (47%), Gaps = 13/213 (6%)
Query: 81 EPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFP--NCLVQRKVLYPFRKQVG 138
EP + + L + HS+ Y+ N ++ + FP LV+R +L +G
Sbjct: 44 EPKKVTVSQLALCHSQRYIDDF---LNGTLGDKAIKKMGFPYSQQLVERTLL-----SIG 95
Query: 139 GTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDL 198
G+I AA+ A N+ GG+HH +D G GFC + D+++ + V+I D
Sbjct: 96 GSIQAAEAAFSHDLTFNLSGGYHHSHSDFGSGFCIFNDLAIAAAHLINTEQADTVLIFDC 155
Query: 199 DAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDE 258
D HQG+G + + +++ + +PR+ + + + + T +EYL L +
Sbjct: 156 DVHQGDGTAQITQNHNQIITCSIHCEQNFPRNKQESTY---DFALPAKTADDEYLATLKQ 212
Query: 259 ALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
AL+ +P++++YNAG DI D LG+ +
Sbjct: 213 ALDFCVRIHNPDIILYNAGADIYTKDELGLFNI 245
>gi|335040248|ref|ZP_08533380.1| histone deacetylase superfamily [Caldalkalibacillus thermarum
TA2.A1]
gi|334179819|gb|EGL82452.1| histone deacetylase superfamily [Caldalkalibacillus thermarum
TA2.A1]
Length = 397
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 116/263 (44%), Gaps = 36/263 (13%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVS---- 109
HPF+ + Q L GFL + + P A+ E+LL+VH Y+++++ + VS
Sbjct: 25 HPFNQKRIALTKQLLECCGFLTPDQVRAPRLATDEELLLVHDREYIEAVKKASQVSGQSS 84
Query: 110 ----------IIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE--RGWAINVG 157
+ LFP+ + ++ VL VGGT+L A+L + +N+
Sbjct: 85 PGQEHPEFHPFGLGTEDTPLFPD-MHRQAVL-----AVGGTLLGAELIAQGRTKRVLNLA 138
Query: 158 GGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVY 217
GG HH + GFC Y D ++ I Y Q ++ +V+ ID DAH G+G + F D V+
Sbjct: 139 GGLHHAQRGKASGFCIYNDCAVAIEYVRKQYDM-KVLYIDTDAHHGDGVQWIFYHDPHVF 197
Query: 218 ILDMFNPGIYPRDYEARRFIDQK-----------VEVVSGTTTNEYLKKLDEALEVAGHT 266
+ G Y Y +++K + V + T +L + LE
Sbjct: 198 TFSIHETGRY--LYPGTGHVNEKGIGEGYGYCLNLPVDAFTQDASWLDCFERGLEAVLQF 255
Query: 267 FDPELVIYNAGTDILEGDPLGML 289
F P+++I G D DPL L
Sbjct: 256 FKPDIIISQHGCDAHFYDPLTHL 278
>gi|163847420|ref|YP_001635464.1| histone deacetylase superfamily protein [Chloroflexus aurantiacus
J-10-fl]
gi|222525269|ref|YP_002569740.1| histone deacetylase superfamily protein [Chloroflexus sp. Y-400-fl]
gi|163668709|gb|ABY35075.1| histone deacetylase superfamily [Chloroflexus aurantiacus J-10-fl]
gi|222449148|gb|ACM53414.1| histone deacetylase superfamily [Chloroflexus sp. Y-400-fl]
Length = 298
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 105/239 (43%), Gaps = 11/239 (4%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ + + + SEG + + P AS +L H +Y++ + + S I
Sbjct: 17 HRFPMEKYALLRERVLSEGIVTPERLHVPEPASITELCRAHDANYVERVINGHLTSAEIR 76
Query: 114 VPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCA 173
P +V+R R+ G TI A ++A G +N+ GG HH AD G G+C
Sbjct: 77 RIGFPWSPQ-MVERS-----RRSAGATIAACRVALSEGVGVNLAGGTHHAFADAGAGYCV 130
Query: 174 YADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP-RDYE 232
+ D ++ + + R+ IID D HQG+G F+ D V+ + +P R +
Sbjct: 131 FNDAAVAARAMQSEGRVQRIAIIDCDVHQGDGTAAIFTGDPTVFTFSIHGAHNFPFRKQQ 190
Query: 233 ARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ D + + T YL L+ + P+LVIY AG D D LG L +
Sbjct: 191 S----DLDIALPDATGDTAYLDALEWGVRQVFAIARPDLVIYLAGADPYYDDRLGRLSL 245
>gi|358447846|ref|ZP_09158359.1| deacetylase family protein [Marinobacter manganoxydans MnI7-9]
gi|357227971|gb|EHJ06423.1| deacetylase family protein [Marinobacter manganoxydans MnI7-9]
Length = 224
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 84/168 (50%), Gaps = 8/168 (4%)
Query: 124 LVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHY 183
LV+R L P GT+L A+LA + G A ++ GG HH D GFC D+++ +
Sbjct: 9 LVRRTFLAP-----SGTVLTAQLALQHGIACHLAGGTHHAHYDYAAGFCILNDLAIAANV 63
Query: 184 AFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
Q I RV+I D+D HQG+G +++ + + YP + ++ D V +
Sbjct: 64 LLQQEGIERVLIFDVDVHQGDGTAALLANEPNAFTCSIHCERNYPFE---KKIGDLDVAL 120
Query: 244 VSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
G YL+ + E L + P++V+Y+AG D+ DPLG L +
Sbjct: 121 PDGLEDGAYLEVVSETLHKSLALSRPDIVLYDAGVDVFRNDPLGRLNI 168
>gi|383451822|ref|YP_005358543.1| Histone deacetylase family protein [Flavobacterium indicum
GPTSA100-9]
gi|380503444|emb|CCG54486.1| Histone deacetylase family protein [Flavobacterium indicum
GPTSA100-9]
Length = 300
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 107/244 (43%), Gaps = 25/244 (10%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ + Q L EG + P + ED++ VH + Y++ L + +
Sbjct: 18 HRFPMIKYELLPQQLLYEGTVVDRQFFSPELPNLEDIIAVHDKKYVQQL-------LDLT 70
Query: 114 VPPVALFPNCLVQRKVLYPFRKQV--------GGTILAAKLAKERGWAINVGGGFHHCSA 165
+ P A+ RK+ +P ++ GTI AK A A N+ GG HH +
Sbjct: 71 LDPRAV-------RKIGFPLSSELIEREFRLAQGTIEGAKNACIDKIAFNIAGGTHHAYS 123
Query: 166 DEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
+ G FC D ++ Y Q +++IIDLD HQGNG + F ++ RV+ +
Sbjct: 124 NRGEAFCLLNDQAIAAQYLLNQKLAKQILIIDLDVHQGNGTAEIFQNNPRVFTFSVHGKS 183
Query: 226 IYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDP 285
YP E D + + T+ +YL + + + P+ + Y +G DIL D
Sbjct: 184 NYPFKKEQS---DLDIALPDQTSDADYLALISKEIPKLIQQVQPDFIFYLSGVDILATDK 240
Query: 286 LGML 289
LG L
Sbjct: 241 LGKL 244
>gi|358448844|ref|ZP_09159339.1| histone deacetylase superfamily protein [Marinobacter manganoxydans
MnI7-9]
gi|385330960|ref|YP_005884911.1| histone deacetylase/AcuC/AphA family protein [Marinobacter
adhaerens HP15]
gi|311694110|gb|ADP96983.1| histone deacetylase/AcuC/AphA family protein [Marinobacter
adhaerens HP15]
gi|357226994|gb|EHJ05464.1| histone deacetylase superfamily protein [Marinobacter manganoxydans
MnI7-9]
Length = 308
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 107/240 (44%), Gaps = 5/240 (2%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQ-SSPNVSIII 112
HP + I +L+ G K V P E +++ LL+VH E YL L P +
Sbjct: 20 HPESPERLAAIISYLADTGLDQKLDWVRPEEITRDQLLMVHPEKYLHQLDLMQPTRGRVF 79
Query: 113 EVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFC 172
P A+ P+ L ++ Q ++++++ A G HH + GFC
Sbjct: 80 TDPDTAMMPDTLRAARLAAGANIQAVDMVMSSQVTNAFVCARPPG---HHAERAKSMGFC 136
Query: 173 AYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYE 232
Y +++L A ++ RV IID D HQGNG S D R+ + F YP +
Sbjct: 137 FYNNVALAAMRALTFHHLERVAIIDFDVHQGNGTVDIVSGDERILMCSSFQHPFYPHSHV 196
Query: 233 ARRFID-QKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
R+ + + + + ++ EY K+++ + F P+L++ +AG D DP+ L +
Sbjct: 197 HRQADNIVNIPIEANCSSEEYRKQVEAGWLKRLNEFKPQLILISAGFDAHRLDPMAELNL 256
>gi|268315689|ref|YP_003289408.1| histone deacetylase superfamily protein [Rhodothermus marinus DSM
4252]
gi|262333223|gb|ACY47020.1| histone deacetylase superfamily [Rhodothermus marinus DSM 4252]
Length = 378
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 121/275 (44%), Gaps = 34/275 (12%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+P++Y PDY G E HPF + + L + G + P EA++ D+L VH
Sbjct: 2 VPVVYHPDYLTYCFGPE--HPFSPVRLEMLWTLLEALGC--APTPIRPPEATRADVLRVH 57
Query: 95 SESYLKSLQSSPNVSII-------IEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKL- 146
+E Y+ ++++ + ++ P V +FP+ ++L VGGT+ A+L
Sbjct: 58 AEDYVARVEAASRGEYVPDAEAFGLDTPDVPVFPDMDRAARIL------VGGTLHGARLI 111
Query: 147 AKERGWAI-NVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNG 205
A R + +GGGFHH GFC Y D+S+ I A + RV ID+D H G+G
Sbjct: 112 ADGRATTVLQLGGGFHHAHPARASGFCVYNDLSIAIR-ALTDAGL-RVAYIDIDVHHGDG 169
Query: 206 HEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQ-----------KVEVVSGTTTNEYLK 254
+ + V + + G Y + FID+ V + T YL+
Sbjct: 170 VQAIHYREDTVLTISLHETGQY--LFPGTGFIDEIGEGRGQGFSLNVPLQPFTDDESYLE 227
Query: 255 KLDEALEVAGHTFDPELVIYNAGTDILEGDPLGML 289
+ + A F P++++ G D DPL L
Sbjct: 228 VFERVVPHALVMFRPDVLVVQCGADAHFQDPLADL 262
>gi|162457481|ref|YP_001619848.1| histone deacetylase [Sorangium cellulosum So ce56]
gi|161168063|emb|CAN99368.1| histone deacetylase family protein [Sorangium cellulosum So ce56]
Length = 327
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 101/230 (43%), Gaps = 33/230 (14%)
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPF----- 133
I EP S EDLL VH+ Y++++ + P L + + L P+
Sbjct: 49 IEEPGPVSDEDLLRVHTPGYVQAIATGE--------------PRALAESQKL-PWSPALA 93
Query: 134 ---RKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNI 190
R GG I A A E G A N+ GFHH AD G GFC + + + + A V+ I
Sbjct: 94 GAVRFTNGGCIAAVSAALEEGIAGNLASGFHHAHADHGEGFCTFNGLVVAMERARVEGRI 153
Query: 191 SRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP-----RDYEARRFIDQK----V 241
R +++D+D H GNG +S + L ++ Y RD E R D + V
Sbjct: 154 RRALVVDMDLHYGNGTASLLASRPWAFALSIYG-NWYKQNRAYRDVEGERAPDTENSWSV 212
Query: 242 EVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
V G+ YL+ L+ L A P+L++Y AG D DP L +
Sbjct: 213 PVPGGSGGAAYLEILERHLGPAIDRAAPDLILYQAGADPFREDPYSPLDL 262
>gi|242012327|ref|XP_002426884.1| histone deacetylase, putative [Pediculus humanus corporis]
gi|212511113|gb|EEB14146.1| histone deacetylase, putative [Pediculus humanus corporis]
Length = 378
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 110/246 (44%), Gaps = 24/246 (9%)
Query: 67 FLSSEGFLDKNCIVEPLEASKEDLLVVHSESY---LKSLQSSPNVSIIIEVPPVALFP-- 121
+SS L + + + EA+ EDL HS Y LK +Q+S ++ ++ +A F
Sbjct: 35 LISSYNLLSQCEVCKCEEATLEDLSSFHSFEYIEILKKIQNSSDLEDMMNCSEIADFNLG 94
Query: 122 -NCLVQRKVLYPFRKQVGGTILAA------KLAKERGWAINVGGGFHHCSADEGGGFCAY 174
+C + +L F K + G+ L A K + +IN GG+HH DE GGFC
Sbjct: 95 YDCPLFEGIL-DFVKLIAGSSLTAAKKLIKKYMQNIPISINWFGGWHHAQRDEAGGFCYV 153
Query: 175 ADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDM--FNPGIYPRD-- 230
DI + I Y R++ IDLD H GNG E F RV + + PG +P
Sbjct: 154 NDIVIAIQYLLKFF--KRILYIDLDVHHGNGVENAFIFSPRVLTFSIHKYEPGYFPSTGS 211
Query: 231 ----YEAR-RFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDP 285
E R +F V + SG ++Y+K + + P+ ++ G D L DP
Sbjct: 212 IDDIGEGRGKFFTVNVPLKSGIKDDKYIKIFNVIFNKIIEKYKPDSIVVQCGADTLPEDP 271
Query: 286 LGMLKV 291
LG V
Sbjct: 272 LGGFNV 277
>gi|345324724|ref|XP_001510728.2| PREDICTED: hypothetical protein LOC100079804 [Ornithorhynchus
anatinus]
Length = 848
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 115/263 (43%), Gaps = 21/263 (7%)
Query: 38 IYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSES 97
IYSP+Y + + K+ + + + + L +V+P AS E++ H+++
Sbjct: 410 IYSPEYVTACDSLSKV----PKRASMVHSLIEAYALLKLMRVVKPKVASMEEMATFHTDA 465
Query: 98 YLKSLQ--SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG---W 152
YL+ LQ S E L +C + + + VGG + A G
Sbjct: 466 YLQHLQKVSEEGDDDHPESVEYGLGYDCPATEGI-FDYAAAVGGATITAAQCLNDGKCKI 524
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
AIN GG+HH DE GFC D L I ++ RV+ +DLD H G+G E FS
Sbjct: 525 AINWAGGWHHAKKDEASGFCYLNDAVLGI--LRLRRKFDRVLYVDLDLHHGDGVEDAFSF 582
Query: 213 DSRVYILDM--FNPGIYPRDYEAR-------RFIDQKVEVVSGTTTNEYLKKLDEALEVA 263
S+V + + F+PG +P + R+ V + G +Y + + L+
Sbjct: 583 TSKVMTVSLHKFSPGFFPGTGDVSDIGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEV 642
Query: 264 GHTFDPELVIYNAGTDILEGDPL 286
F+PE V+ G D + GDP+
Sbjct: 643 YIAFNPEAVVVQLGADTMAGDPM 665
>gi|298675423|ref|YP_003727173.1| histone deacetylase superfamily protein [Methanohalobium
evestigatum Z-7303]
gi|298288411|gb|ADI74377.1| histone deacetylase superfamily [Methanohalobium evestigatum
Z-7303]
Length = 337
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 117/268 (43%), Gaps = 29/268 (10%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
+IY PDY G HP S + ++L + + +VEP A + +H+
Sbjct: 4 IIYHPDYLKHNTG---NHPESSIRLSHAVEYLEKQDVFKNHPLVEPNTAEISQIQTIHTP 60
Query: 97 SYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK--LAKERGWAI 154
Y+K ++ N E+P L P+ +V + GG+I A +A+
Sbjct: 61 DYIKKVEYHCNN----EIP---LDPDTVVSKDSYRAALLAAGGSIRAVNETYTNNSAFAL 113
Query: 155 NVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDS 214
G HH +D GFC + +I++ YA Q + RV+IID D H GNG + F SDS
Sbjct: 114 VRPPG-HHAESDRAKGFCLFNNIAIAAKYAQSQ-GMKRVLIIDWDVHHGNGTQHSFYSDS 171
Query: 215 RVYILDMFNPGIYPRDYEARRFIDQ-----------KVEVVSGTTTNEYLKKLDEALEVA 263
V + +P ++D+ V + +G+T +EY D+
Sbjct: 172 TVMYMSTHRYPWFP----GTGWMDETGSGEGEGYNINVPLFAGSTDDEYAYVFDKIFMPV 227
Query: 264 GHTFDPELVIYNAGTDILEGDPLGMLKV 291
F P++++ +AG D E D LG +K+
Sbjct: 228 ALQFQPDIIMVSAGMDAQENDMLGGMKL 255
>gi|399910946|ref|ZP_10779260.1| histone deacetylase superfamily protein [Halomonas sp. KM-1]
Length = 311
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 114/261 (43%), Gaps = 19/261 (7%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
I PD D+ +G E HP + I L+ G L + E AS+E+L VH
Sbjct: 5 FISHPDCDLHHMGPE--HPESPLRLEAIRARLALSGLLQQTMQSEARPASEEELARVHPL 62
Query: 97 SYLKSL-QSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAIN 155
+L++L + P I+ + P+ L +V G ++ RG A N
Sbjct: 63 RHLRALDKCVPETGIVTLDSDTLMNPDSLSAARV-------AAGAVIRGVDQVYRGQADN 115
Query: 156 VGGGF----HHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
V HH A + GFC Y ++++ +A + + R+ I+D D HQ NG F
Sbjct: 116 VFCAVRPPGHHAEATDAMGFCFYNNVAVGAAHARARHGVRRIAILDFDVHQCNGTIDIFK 175
Query: 212 SDSRVYILDMFNPGIYPRDY---EARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFD 268
D + I F YP Y E + ++ +E +GT + + K +++ A H F
Sbjct: 176 DDPDILICTSFQYPFYPWRYLRSEWQNVVNTPLE--AGTESAAFRKAIEDDWLPALHAFK 233
Query: 269 PELVIYNAGTDILEGDPLGML 289
PELV+ +AG D DPL L
Sbjct: 234 PELVLVSAGFDAHREDPLAEL 254
>gi|220926539|ref|YP_002501841.1| histone deacetylase superfamily protein [Methylobacterium nodulans
ORS 2060]
gi|219951146|gb|ACL61538.1| histone deacetylase superfamily [Methylobacterium nodulans ORS
2060]
Length = 298
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 117/257 (45%), Gaps = 13/257 (5%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LP+++ P Y+ G+ H F K+GR+ + L G + N P A + + H
Sbjct: 2 LPVVFHPAYEA---GLPDGHRFPMRKYGRLAEILVERGLV-PNGFARPEPAGAGTVALAH 57
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAI 154
Y++ + + V IE + L + V R+ L GGT+LAA+LA G A
Sbjct: 58 DPFYVEQVLTG-TVPRAIETA-IGLPVDAGVARRAL----ASAGGTLLAARLALAGGLAG 111
Query: 155 NVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDS 214
+ GG HH GGGFC + D+++ + I R +IIDLD HQG+G +++
Sbjct: 112 STAGGSHHGRRARGGGFCVFNDVAVAALALHREGTIRRALIIDLDVHQGDGTADCLAAEP 171
Query: 215 RVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIY 274
++ M YP D + D + + G + YL L + + P+LV Y
Sbjct: 172 DLFTFSMHGEKNYPAD---KVPGDLDIGLPDGLDDDGYLAVLHQHVPRLLDALAPDLVFY 228
Query: 275 NAGTDILEGDPLGMLKV 291
NAG D D LG L +
Sbjct: 229 NAGVDPHRDDRLGRLAL 245
>gi|387814828|ref|YP_005430315.1| hypothetical protein MARHY2424 [Marinobacter hydrocarbonoclasticus
ATCC 49840]
gi|381339845|emb|CCG95892.1| conserved hypothetical protein [Marinobacter hydrocarbonoclasticus
ATCC 49840]
Length = 308
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 104/242 (42%), Gaps = 7/242 (2%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQ-SSPNVSIII 112
HP + I +L+ + V P E +++ LL VH ESYL L P +
Sbjct: 20 HPESPERLSSILAYLADTNLQQELDWVRPEEITRDQLLTVHPESYLHQLDLMQPTRGRVF 79
Query: 113 EVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFC 172
P A+ P+ L K+ Q ++++++ A G HH + GFC
Sbjct: 80 TDPDTAMMPDTLRAAKLAAGGNVQAVDMVMSSQVTNAFVCARPPG---HHAERAKSMGFC 136
Query: 173 AYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYE 232
Y +I+L A ++ RV I+D D HQGNG S D R+ + F YP +
Sbjct: 137 FYNNIALAAMRALTFHHLERVAIVDFDVHQGNGTVDIVSGDERILMCSSFQHPFYPHSH- 195
Query: 233 ARRFIDQKVE--VVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLK 290
R D V + + + EY K ++ A F P+LV+ +AG D DP+ L
Sbjct: 196 VHRQADNIVNAPIAADCSAAEYRKTVEAAWLKKLQDFRPQLVLISAGFDGHRLDPMAELN 255
Query: 291 VK 292
++
Sbjct: 256 LE 257
>gi|334343955|ref|YP_004552507.1| histone deacetylase [Sphingobium chlorophenolicum L-1]
gi|334100577|gb|AEG48001.1| Histone deacetylase [Sphingobium chlorophenolicum L-1]
Length = 305
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 87/174 (50%), Gaps = 11/174 (6%)
Query: 126 QRKVLYPFRKQV--------GGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADI 177
+R++ +P ++V GGT LAA+LA G+A N GG HH AD G G+C + D+
Sbjct: 74 ERRIGFPVTERVMRRSMLSPGGTWLAARLAMRHGYAANAAGGSHHALADTGAGYCVFNDL 133
Query: 178 SLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFI 237
++ + + R++I+DLD HQG+G ++ L + +P +AR +
Sbjct: 134 AIAANRLIAEGEARRILILDLDVHQGDGTAVLTGGRDDIFTLSIHAESNFPV-RKARSSL 192
Query: 238 DQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
D + + GT + Y+ L L F P+L++Y AG D D LG L +
Sbjct: 193 D--IGLRDGTGDDAYMDALMRVLPPVLDDFRPDLILYQAGVDPHADDRLGRLAL 244
>gi|449134933|ref|ZP_21770397.1| histone deacetylase/AcuC/AphA family protein [Rhodopirellula
europaea 6C]
gi|448886412|gb|EMB16819.1| histone deacetylase/AcuC/AphA family protein [Rhodopirellula
europaea 6C]
Length = 305
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 118/262 (45%), Gaps = 18/262 (6%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+ L Y+ +D L + H F +K+ + Q + + ++ P A+ E LL H
Sbjct: 1 MRLYYTDHFD---LPLPDGHRFPMTKYRLLRQRIVESDHHRDDALIVPQAATDEQLLHCH 57
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAI 154
+ Y++ +QS E+ + FP K++ R+ G TI AA+ A E G +
Sbjct: 58 TPDYVQRVQSGTLTKQ--EIRRIG-FP---WSEKMVERSRRSTGATISAARAALEEGVSA 111
Query: 155 NVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDS 214
N+ GG HH A EG G+C + D ++ I + I R IIDLD HQGNG
Sbjct: 112 NLAGGTHHAFAGEGEGYCVFNDAAVAIRTLQSEGLIQRATIIDLDVHQGNGTASILKDVP 171
Query: 215 RVYILDMFNPGIYPRDYEARRF-IDQKVEVVSGTTTNEYLKKLDEAL-EVAGHTFDP--- 269
V+ + +P R+ D V + GT ++Y L L ++ H D
Sbjct: 172 SVFTCSVHGVKNFP----LRKMPSDLDVSLPDGTGDDDYCDALRSVLAKLEKHQSDSGRF 227
Query: 270 ELVIYNAGTDILEGDPLGMLKV 291
+LVIY AG D + D LG L +
Sbjct: 228 DLVIYLAGADPFKNDRLGRLSL 249
>gi|288817679|ref|YP_003432026.1| acetoin utilization protein [Hydrogenobacter thermophilus TK-6]
gi|384128440|ref|YP_005511053.1| histone deacetylase [Hydrogenobacter thermophilus TK-6]
gi|288787078|dbj|BAI68825.1| acetoin utilization protein [Hydrogenobacter thermophilus TK-6]
gi|308751277|gb|ADO44760.1| Histone deacetylase [Hydrogenobacter thermophilus TK-6]
Length = 375
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 118/255 (46%), Gaps = 22/255 (8%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIII- 112
HP + + +FL + G +++ I++ EA++E+LL+ H+E YL++L+ S +
Sbjct: 19 HPLRIPRVSLLIEFLKAMGLIEEQEIIQSREATEEELLLYHTEDYLRALEESDRCMCVKD 78
Query: 113 ---EVPPVALFPNCL---VQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSAD 166
E + + N + + R L G ++ A ++ E G A N GG HH
Sbjct: 79 RYREKYNIGTYENPVSPAMWRGSLLA----TGSSVQAVEVFLEGGVAFNPAGGMHHAYPS 134
Query: 167 EGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGI 226
GFC D ++ I + + +++ IDLDAH + ++ + D V++L +
Sbjct: 135 RANGFCFINDPAVSIEF-LKKKGFKKILYIDLDAHHCDAIQESYYQDDSVFVLSLHQSPE 193
Query: 227 YPRDYEA----------RRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNA 276
Y +++ + + V + G EYL L+E+L++ F P++ I
Sbjct: 194 YAFPFKSGFAHEIGRGRGKGYNMNVPLPKGIKDGEYLYALEESLKIVKEIFSPDVYILQL 253
Query: 277 GTDILEGDPLGMLKV 291
GTD L+ D L ++
Sbjct: 254 GTDSLKEDYLSKFEL 268
>gi|333899036|ref|YP_004472909.1| histone deacetylase superfamily protein [Pseudomonas fulva 12-X]
gi|333114301|gb|AEF20815.1| histone deacetylase superfamily [Pseudomonas fulva 12-X]
Length = 306
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 119/261 (45%), Gaps = 16/261 (6%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LPLIY DY F G H F K+ + L + G ++ P + L +
Sbjct: 1 MPLPLIYHDDYSPPFPGG---HRFPMEKFRLLRDHLVASGLTRDEELLRPEICPADILAL 57
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
H +Y++ S + P L +R V + VGG++LA++ A + G
Sbjct: 58 CHCPAYIERYLSGDLSHEDQRRLGLPWSPE-LARRTV-----RAVGGSLLASEQALQHGL 111
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
A ++ GG HH D GFC + D+++ Y RV+I D D HQG+G +
Sbjct: 112 ACHLAGGTHHAHYDYPAGFCIFNDLAVIARYLLESGKAGRVLIFDCDVHQGDGTARLLE- 170
Query: 213 DSRVYILDMFNPGIY-PRDYEARRF-IDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPE 270
++ D ++ ++Y AR+ D + + G +YLK +D+ L + P+
Sbjct: 171 ----HVPDAITVSLHCEQNYPARKASSDWDIPLPRGMGDADYLKVVDDTLGYLLALYQPD 226
Query: 271 LVIYNAGTDILEGDPLGMLKV 291
+V+Y+AG D+ + D LG L++
Sbjct: 227 IVLYDAGVDVHKDDALGYLQL 247
>gi|408405858|ref|YP_006863841.1| histone deacetylase superfamily [Candidatus Nitrososphaera
gargensis Ga9.2]
gi|408366454|gb|AFU60184.1| putative histone deacetylase superfamily [Candidatus Nitrososphaera
gargensis Ga9.2]
Length = 322
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 112/257 (43%), Gaps = 19/257 (7%)
Query: 49 GIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESY--LKSLQSSP 106
G E HPF + + G L SE +D + EP+ + +D L H + Y L + S
Sbjct: 16 GFEGSHPFGTDRLGAFWSKLQSEN-VDNIVVEEPMLGTDQDALSFHDKEYVDLVRMASRH 74
Query: 107 NVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGG--TILAAKLAKER--GWAINVGGGFHH 162
++++ F V LY + ++A K +K R A N GG HH
Sbjct: 75 GGGMLLDRGDTPAFKG--VFEASLYVIGSTLAALDMVVAGKDSKGRKIDHAFNPIGGLHH 132
Query: 163 CSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMF 222
D GGFC + DI + I A + I+RVM +D+DAH G+G +F D ++ D+
Sbjct: 133 ARRDTAGGFCVFNDIGVAILAARKKYGINRVMYVDIDAHHGDGVFYEFEDDPLLFFADIH 192
Query: 223 NPG--IYPRDYEARRF-------IDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVI 273
G +YP A + + G +E++K D+ + PEL+I
Sbjct: 193 EDGRHLYPGTGSASEIGKGTAAGTKLNLPLEPGAGDDEFIKAFDKVEQFV-DGIKPELII 251
Query: 274 YNAGTDILEGDPLGMLK 290
G D L GDP+ ++
Sbjct: 252 LQCGADGLAGDPITHMQ 268
>gi|119486182|ref|ZP_01620242.1| histone deacetylase/AcuC/AphA family protein [Lyngbya sp. PCC 8106]
gi|119456673|gb|EAW37802.1| histone deacetylase/AcuC/AphA family protein [Lyngbya sp. PCC 8106]
Length = 305
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 114/261 (43%), Gaps = 20/261 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LP++Y DY L H F SK+ + Q L ++ ++ + + P E + +VH
Sbjct: 3 LPIVYHSDYVAPLL---PGHRFPMSKFRLLYQMLLADEVIEPSQVHTPELPPSEWIELVH 59
Query: 95 SESYLKSLQSS---PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
Y+++ P I +P + L R + VGG +L AKLA G
Sbjct: 60 DRDYVQAYCQGTLDPKAQRRIGLP----WSPALANRTCI-----AVGGAVLTAKLALSHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNIS-RVMIIDLDAHQGNGHEKDF 210
A N GG HH + G GFC + DI++ L ++ +++I+DLD HQG+ F
Sbjct: 111 LACNTAGGTHHAFPNLGTGFCIFNDIAIAAR-TIQNLGLAPKILILDLDVHQGDATAFIF 169
Query: 211 SSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPE 270
D V+ M +P ++ D V + G YL L + LE P+
Sbjct: 170 QDDPSVFTFSMHCEANFP---ARKQKSDLDVGLPVGMEDEAYLYTLGKYLEDLLSEVKPD 226
Query: 271 LVIYNAGTDILEGDPLGMLKV 291
LV Y+AG D D LG L +
Sbjct: 227 LVFYDAGVDTHVDDRLGKLAL 247
>gi|86134858|ref|ZP_01053440.1| deacetylase [Polaribacter sp. MED152]
gi|85821721|gb|EAQ42868.1| deacetylase [Polaribacter sp. MED152]
Length = 300
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 108/238 (45%), Gaps = 13/238 (5%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ + + L EG EP + VH Y L N+++ +
Sbjct: 18 HRFPMIKYDLLPEQLIYEGTCSLENFFEPEIPDNKHFFTVHEPDYFFDLL---NITLDQK 74
Query: 114 VPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGF 171
FP L++R+++ GT+ A++ A G A+N+ GG HH ++ G F
Sbjct: 75 AARKIGFPLSEVLIEREMVI-----ADGTMKASEFALRNGIAMNIAGGTHHAFSNRGEAF 129
Query: 172 CAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDY 231
C D ++ Y + + +V+I+DLD HQGNG + F++D+ V+ M YP
Sbjct: 130 CMLNDQAIAAKYLQHKNLVKKVLIVDLDVHQGNGTAEIFANDNSVFTFSMHGKSNYPFIK 189
Query: 232 EARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGML 289
E+ D + + + T +E+L L + L + P+ + Y G D+L D LG L
Sbjct: 190 ESS---DLDIALENDTNDDEFLSILKKTLPNLIESEQPDFIYYLCGVDVLATDKLGKL 244
>gi|334705473|ref|ZP_08521339.1| histone deacetylase/AcuC/AphA family protein [Aeromonas caviae
Ae398]
Length = 298
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 120/262 (45%), Gaps = 21/262 (8%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
L + Y P Y S L + + H F +K+ + + L + + + + AS+E +
Sbjct: 1 MSLRIFYHPHY--SALTLPERHRFPLAKYQALFERLIALDY----PLAQAAPASREQIEK 54
Query: 93 VHSESYLKS-LQSSPNVSIIIEVPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKE 149
VH +Y+++ L + + I + FP L++R + VG T+ A++ A
Sbjct: 55 VHDAAYVQAALAGTLDEGAIRRLG----FPWSPLLIERTL-----HSVGATLAASRHALA 105
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKD 209
+G + + GG+HH G GFC + D+ + + RV+I+DLD HQG+G
Sbjct: 106 QGCGLQISGGYHHAHRGFGSGFCLFNDLVIAARTCLDEGLCERVLIVDLDVHQGDGSAAL 165
Query: 210 FSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDP 269
+ + L + +P A + SG + YL+ LD+AL +A + P
Sbjct: 166 CTGSRDIITLSLHGEHNFPHHKPASHL---DFPLPSGMEDDAYLETLDQALALAHRLYAP 222
Query: 270 ELVIYNAGTDILEGDPLGMLKV 291
+ ++Y AG D+ D LG L +
Sbjct: 223 DFILYQAGVDVHRDDELGYLSL 244
>gi|429885836|ref|ZP_19367411.1| Histone deacetylase/AcuC/AphA family protein [Vibrio cholerae PS15]
gi|429227354|gb|EKY33385.1| Histone deacetylase/AcuC/AphA family protein [Vibrio cholerae PS15]
Length = 306
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 117/268 (43%), Gaps = 28/268 (10%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKW---GRICQFLSSEGFLDKNCIVEPLEASKEDLL 91
+PLIY P Y L + +P + + + Q SE + P+ A +
Sbjct: 2 IPLIYHPIYSQLDLPVGHRYPINKYRLLYEEIVRQREQSEAWQASFEFHTPIAAELSRIT 61
Query: 92 VVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRK--------QVGGTILA 143
+H Y+++L + + R++ +P+ K VGGT L
Sbjct: 62 PLHDPDYVQALLEGTLSAAKM--------------RRIGFPWSKPLIERTLYSVGGTCLT 107
Query: 144 AKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQG 203
+ A + G AI++ GG+HH AD G GFC + D+++ H+A ++ +V+IID D H G
Sbjct: 108 VEQALQSGVAIHLSGGYHHAHADFGSGFCLFNDLAIAAHFALSLPSVDKVLIIDSDVHHG 167
Query: 204 NGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVA 263
+G + + L +P A V + T E+L + +E+A
Sbjct: 168 DGTATLCAERDDIITLSFHCDKNFPARKPASSM---DVGFANQTGDEEFLCTFIQVVEMA 224
Query: 264 GHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ P+L++Y+AG DI D LG L +
Sbjct: 225 VNLHRPDLILYDAGVDIHNDDELGYLSI 252
>gi|145589710|ref|YP_001156307.1| histone deacetylase superfamily protein [Polynucleobacter
necessarius subsp. asymbioticus QLW-P1DMWA-1]
gi|145048116|gb|ABP34743.1| histone deacetylase superfamily [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
Length = 299
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 107/249 (42%), Gaps = 33/249 (13%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
H F K+ R+ + G L +E AS +L H YL I+
Sbjct: 17 HRFPMEKYSRLRDLV---GTLSSVETIEAPAASDTQILYCHDPQYL------------IK 61
Query: 114 VPPVALFPNCLVQRKVLYPF--------RKQVGGTILAAKLAKERGWAINVGGGFHHCSA 165
V L P Q+++ +P+ R+ G T+ AAK A E G A N+ GG HH
Sbjct: 62 VIEGKLSPQ--EQKEIGFPWSVKMVERSRRSAGATVAAAKTALEEGIAANLAGGTHHAYR 119
Query: 166 DEGGGFCAYADISLCIHYAFVQLNIS---RVMIIDLDAHQGNGHEKDFSSDSRVYILDMF 222
G GFC + D ++ +Q IS ++ +IDLD HQGNG +D ++ L +
Sbjct: 120 AIGSGFCVFNDSAIAART--LQKEISPHLKIAVIDLDVHQGNGTAAILQNDPSIFTLSIH 177
Query: 223 NPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILE 282
+P E D + + G YL L +ALE F + +IY AG D E
Sbjct: 178 GENNFPFKKEQS---DLDLGLPDGCEDKLYLNALCKALEELESRFKADCIIYLAGADPHE 234
Query: 283 GDPLGMLKV 291
GD LG L +
Sbjct: 235 GDRLGRLNL 243
>gi|50745636|ref|XP_420178.1| PREDICTED: histone deacetylase 8 [Gallus gallus]
Length = 368
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 119/263 (45%), Gaps = 21/263 (7%)
Query: 38 IYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSES 97
+YSP+Y + K+ + + + + LD I++P AS E++ H+++
Sbjct: 10 VYSPEYAALCDSLCKV----PKRASMVHSLIEAYSLLDHMMIIKPKVASMEEMASFHTDA 65
Query: 98 YLKSLQ--SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGG-TILAAK--LAKERGW 152
YL+ LQ S E L +C + + + VGG TI AA+ L +
Sbjct: 66 YLQHLQKVSEEGDDDHPESVEYGLGYDCPATEGI-FDYAAAVGGATITAAQCLLDGKCKV 124
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
AIN GG+HH DE GFC D L I ++ R++ IDLD H G+G E FS
Sbjct: 125 AINWPGGWHHAKKDEASGFCYLNDAVLGI--LRLRQKFDRILYIDLDLHHGDGVEDAFSF 182
Query: 213 DSRVYILDM--FNPGIYPRDYEAR-------RFIDQKVEVVSGTTTNEYLKKLDEALEVA 263
S+V + + F+PG +P + R+ V + G +Y + + L+
Sbjct: 183 TSKVMTVSLHKFSPGFFPGTGDVTDIGLGKGRYYSVNVPIQDGIQDEKYYQICETVLKEV 242
Query: 264 GHTFDPELVIYNAGTDILEGDPL 286
F+PE V+ G D + GDP+
Sbjct: 243 YAAFNPEAVVLQLGADTIAGDPM 265
>gi|345310682|ref|XP_001518456.2| PREDICTED: hypothetical protein LOC100088905 [Ornithorhynchus
anatinus]
Length = 241
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 57/80 (71%)
Query: 24 SKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPL 83
++LY D+P P++YSP Y+I+F+G+EKLHPFD+ KWG++ FL E + + IV
Sbjct: 47 TELYQDVPSTCWPIVYSPGYNITFMGLEKLHPFDAGKWGKVINFLKEEKLIADDMIVAAR 106
Query: 84 EASKEDLLVVHSESYLKSLQ 103
EA++EDLLVVH+ YL L+
Sbjct: 107 EATEEDLLVVHTRRYLNRLK 126
>gi|120555414|ref|YP_959765.1| histone deacetylase superfamily protein [Marinobacter aquaeolei
VT8]
gi|120325263|gb|ABM19578.1| histone deacetylase superfamily [Marinobacter aquaeolei VT8]
Length = 308
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 104/242 (42%), Gaps = 7/242 (2%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQ-SSPNVSIII 112
HP + I +L+ + V P E +++ LL VH ESYL L P +
Sbjct: 20 HPESPERLSSILAYLADTNLQQELDWVRPEEITRDQLLTVHPESYLHQLDLMQPTRGRVF 79
Query: 113 EVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFC 172
P A+ P+ L K+ Q ++++++ A G HH + GFC
Sbjct: 80 TDPDTAMMPDTLRAAKLAAGGNVQAVDMVMSSQVTNAFVCARPPG---HHAERAKSMGFC 136
Query: 173 AYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYE 232
Y +I+L A ++ RV I+D D HQGNG S D R+ + F YP +
Sbjct: 137 FYNNIALAAMRALTFHHLERVAIVDFDVHQGNGTVDIVSGDERILMCSSFQHPFYPHSH- 195
Query: 233 ARRFIDQKVE--VVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLK 290
R D V + + + EY K ++ A F P+LV+ +AG D DP+ L
Sbjct: 196 VHRQADNIVNAPISADCSAAEYRKTVEAAWLKKLQDFRPQLVLISAGFDGHRLDPMAELN 255
Query: 291 VK 292
++
Sbjct: 256 LE 257
>gi|152996916|ref|YP_001341751.1| histone deacetylase superfamily protein [Marinomonas sp. MWYL1]
gi|150837840|gb|ABR71816.1| histone deacetylase superfamily [Marinomonas sp. MWYL1]
Length = 308
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 111/260 (42%), Gaps = 18/260 (6%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPL++ P+Y I F H F K+G + + L +G L P S + L+ H
Sbjct: 6 LPLVFHPNYSIPF---PAGHRFPMRKFGLLAESLREQGILTDENEYTPAPLSLKVLMAAH 62
Query: 95 SESYLKSL---QSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
+ Y++ + S I +P + LV+R + + V GT+L +LA E G
Sbjct: 63 HKEYVQRFIRGELSKREEKEIGLP----WSEWLVERTL-----RAVSGTMLTTELAFEHG 113
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A ++ GG HH G GFC + D+++ +++I+D D HQG+G F
Sbjct: 114 LACHLAGGTHHAHPSHGSGFCIFNDLAVAALAMIGSGRAKKILILDCDVHQGDGTIAFFK 173
Query: 212 SDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPEL 271
+ + YP ++ + + G EYL L L P+
Sbjct: 174 DRVDIIPVSWHCEENYP---PIKQTAGINIAIPKGANDQEYLSILKSTLPAILAEQQPDF 230
Query: 272 VIYNAGTDILEGDPLGMLKV 291
V Y+AG D+ + D LG + +
Sbjct: 231 VFYDAGVDVHQDDRLGYVNL 250
>gi|212557470|gb|ACJ29924.1| Histone deacetylase/AcuC/AphA family protein [Shewanella
piezotolerans WP3]
Length = 306
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 116/260 (44%), Gaps = 17/260 (6%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY Y S L + H F ++K+ + Q+L +G ++ + + + L H
Sbjct: 2 LPLIYHASY--SKLALPSKHRFPATKYLYLYQYLLQQGIAKQSQFFAAEQVTPKALAETH 59
Query: 95 SESYL-KSLQSSPNVSIIIEVPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
Y+ + + + + I + FP LV R + V GT LA A E G
Sbjct: 60 CADYVSRFINGTLDTKSIRRIG----FPWSESLVARTL-----HSVAGTQLACLKALEYG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
AI++ GG+HH G GFC + D++ A Q I V+I D D HQG+G S
Sbjct: 111 CAIHLSGGYHHAHHRFGSGFCIFNDLTYAAQQALKQPGIDNVLIFDCDVHQGDGTATTAS 170
Query: 212 SDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPEL 271
+ ++ + +P + + +E+ GTT YL+ + + L P+L
Sbjct: 171 AFDKIITCSIHCQHNFPARKQQSNY---DIELPRGTTDKYYLETVSQTLSYLIRLHQPDL 227
Query: 272 VIYNAGTDILEGDPLGMLKV 291
+IY+AG DI D LG +
Sbjct: 228 IIYDAGVDIHTDDNLGYFNI 247
>gi|410664778|ref|YP_006917149.1| deacetylase [Simiduia agarivorans SA1 = DSM 21679]
gi|409027135|gb|AFU99419.1| deacetylase [Simiduia agarivorans SA1 = DSM 21679]
Length = 279
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 104/237 (43%), Gaps = 17/237 (7%)
Query: 59 SKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSS---PNVSIIIEVP 115
+K+G + +L +G P + L + H E Y+ + S + +P
Sbjct: 2 AKFGLLHSYLQQQGIAQPTNTFRPGKIKHSQLALAHCEQYVTAFASGLLDAQAQRRLGLP 61
Query: 116 PVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYA 175
+ LV+R + P GT+LAA A G A ++ GG HH D GFC +
Sbjct: 62 ----WSEGLVRRTFISP-----AGTLLAAHFALREGIACHLAGGTHHAHRDFASGFCVFN 112
Query: 176 DISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP-RDYEAR 234
D+++ Q +RV++ DLD HQG+G + + Y + +P R ++
Sbjct: 113 DLAVTARVLLEQQLATRVLVFDLDVHQGDGTARILADVPGTYTCSVHCEKNFPVRKAQS- 171
Query: 235 RFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
D V + + + YL+ + + L + P+ ++Y+AG D+ DPLG L +
Sbjct: 172 ---DLDVNLPVAMSDDGYLQVVSDTLMRLLRDYQPDFILYDAGVDVFADDPLGRLNI 225
>gi|17540334|ref|NP_500788.1| Protein HDA-6, isoform a [Caenorhabditis elegans]
gi|351063051|emb|CCD71098.1| Protein HDA-6, isoform a [Caenorhabditis elegans]
Length = 863
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 128/277 (46%), Gaps = 23/277 (8%)
Query: 37 LIYSPDYDISFLGIEK-LHPFDSSKWGRICQFLSSEGFLDKNCIVEPLE--ASKEDLLVV 93
LIY + D + +E+ HP ++ RI + L G L+K C+ E A+ E++ +V
Sbjct: 428 LIYFNEGDDAHFDLEEDNHPEKPARTRRILKTLRESGVLEK-CVDRNCERIATNEEIRLV 486
Query: 94 HSESYLKSLQSSPNVS-IIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAA-----KLA 147
H++ L+ L+++ + + F + + R L RK VG + + K A
Sbjct: 487 HTKKMLEHLRTTETMKDEELMEEAEKEFNSIYLTRDTLKVARKAVGAVLQSVDEIFEKDA 546
Query: 148 KERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHE 207
+R + V HH SA + GFC + ++++ YA + RV+I+D D H GNG +
Sbjct: 547 GQRNALVIVRPPGHHASASKSSGFCIFNNVAVAAKYAQRRHKAKRVLILDWDVHHGNGTQ 606
Query: 208 KDFSSDSRVYILDM-------FNPGIYPRDY-EARRFIDQKVEV---VSGTTT--NEYLK 254
+ F DS V + + F P P+DY + + + V SG NEY
Sbjct: 607 EIFYEDSNVMYMSIHRHDKGNFYPIGEPKDYSDVGEGAGEGMSVNVPFSGVQMGDNEYQM 666
Query: 255 KLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ + F+P+LV+ +AG D DPLG KV
Sbjct: 667 AFQRVIMPIAYQFNPDLVLISAGFDAAVDDPLGEYKV 703
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 109/259 (42%), Gaps = 34/259 (13%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEP-LEASKEDLLVVHSESYLKSLQSSPNV---- 108
HP S + +I + L+ L+K ++ LE DL V H +S +K L S
Sbjct: 34 HPESSDRILKIKEALTKTKILEKCTVLTNFLEIDDADLEVTHDKSMVKDLMESEKKTQED 93
Query: 109 --SIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSAD 166
S + V + N + K + + I+A + + G+A+ G HH +
Sbjct: 94 INSQCEKYDSVFMTENSMKVAKDGVACVRDLTNRIMANEASN--GFAVVRPPG-HHADSV 150
Query: 167 EGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILD------ 220
GFC + +++ AF R++I+DLD H G+G ++ F D RV
Sbjct: 151 SPCGFCLFNNVAQAAEEAFFS-GAERILIVDLDVHHGHGTQRIFYDDKRVLYFSIHRHEH 209
Query: 221 -MFNPGIYPRD-----------YEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFD 268
+F P + D Y A +++ +G T ++YL + L FD
Sbjct: 210 GLFWPHLPESDFDHIGSGKGLGYNANLALNE-----TGCTDSDYLSIIFHVLLPLATQFD 264
Query: 269 PELVIYNAGTDILEGDPLG 287
P VI +AG D L GDPLG
Sbjct: 265 PHFVIISAGFDALLGDPLG 283
>gi|269965988|ref|ZP_06180080.1| histone deacetylase/AcuC/AphA family protein [Vibrio alginolyticus
40B]
gi|269829384|gb|EEZ83626.1| histone deacetylase/AcuC/AphA family protein [Vibrio alginolyticus
40B]
Length = 307
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 123/270 (45%), Gaps = 33/270 (12%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQ----FLSSEGFLDKNCIVEPLEASKEDL 90
LP IY P Y S L + + H + K+ + + + + + + +P + ++
Sbjct: 2 LPFIYHPIY--SQLELPEGHRYPIMKYQYLYESVLVHMEKDNWKEHTQFFQPEALTVGEV 59
Query: 91 LVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTIL 142
VH E Y++ L S +P + R++ +P+ + + GT L
Sbjct: 60 KRVHDEEYVELLVSG-------NMPAAKM-------RRIGFPWSESLITRTLTSAAGTAL 105
Query: 143 AAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQ 202
AK A E G AI++ GG+HH + G GFC + D+ + A ++ +V+IID D H
Sbjct: 106 TAKKALEYGVAIHLSGGYHHAHKEFGSGFCLFNDLVIAARQALEVEHVDKVLIIDSDVHH 165
Query: 203 GNGHEKDFSSDSRVYILDMFNPGIYPRDYEARR-FIDQKVEVVSGTTTNEYLKKLDEALE 261
G+G + + L +P AR+ D V +V GT ++L E ++
Sbjct: 166 GDGTATLCDDEPDIITLSFHCDKNFP----ARKPQSDLDVPLVRGTGDEDFLMAFKEVVD 221
Query: 262 VAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+A + P+LVIY+AG DI + D LG V
Sbjct: 222 MALNLHRPDLVIYDAGVDIHQDDELGYFDV 251
>gi|422300155|ref|ZP_16387688.1| histone deacetylase [Pseudomonas avellanae BPIC 631]
gi|422587598|ref|ZP_16662268.1| histone deacetylase family protein [Pseudomonas syringae pv.
morsprunorum str. M302280]
gi|422654668|ref|ZP_16717402.1| histone deacetylase family protein [Pseudomonas syringae pv.
actinidiae str. M302091]
gi|330873513|gb|EGH07662.1| histone deacetylase family protein [Pseudomonas syringae pv.
morsprunorum str. M302280]
gi|330967685|gb|EGH67945.1| histone deacetylase family protein [Pseudomonas syringae pv.
actinidiae str. M302091]
gi|407987739|gb|EKG30457.1| histone deacetylase [Pseudomonas avellanae BPIC 631]
Length = 305
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 117/260 (45%), Gaps = 14/260 (5%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LPLIY DY +F + H F K+ + +L G ++ P + L +
Sbjct: 1 MSLPLIYHDDYSPAF---PQDHRFPMDKFRLLRDYLVDSGLTRDVQLMRPELCPADILAL 57
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
H SY+ S ++S + + L +R + + VGG++L A+ A G
Sbjct: 58 AHDPSYISRYLSG-DLSREDQRRLGLPWSEALARRTI-----RAVGGSLLTAEQALTHGL 111
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
A ++ GG HH D GFC + D+++ Y + +V+I D D HQG+G + +
Sbjct: 112 ACHLAGGTHHAHYDYPAGFCIFNDLAVISQYLLQSGRVGKVLIFDCDVHQGDGTARILAD 171
Query: 213 DSRVYILDMFNPGIYPRDYEARRF-IDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPEL 271
+ + +P AR+ D + + G +YL +D+ L + P+L
Sbjct: 172 TEDAITVSLHCEKNFP----ARKAQSDWDIPLPMGMGDADYLNVVDDLLNYLLPFYKPDL 227
Query: 272 VIYNAGTDILEGDPLGMLKV 291
V+Y+AG D+ + D LG L++
Sbjct: 228 VLYDAGVDVHKDDALGYLQL 247
>gi|66047522|ref|YP_237363.1| histone deacetylase superfamily protein [Pseudomonas syringae pv.
syringae B728a]
gi|422671771|ref|ZP_16731136.1| histone deacetylase superfamily protein [Pseudomonas syringae pv.
aceris str. M302273]
gi|63258229|gb|AAY39325.1| Histone deacetylase superfamily [Pseudomonas syringae pv. syringae
B728a]
gi|330969510|gb|EGH69576.1| histone deacetylase superfamily protein [Pseudomonas syringae pv.
aceris str. M302273]
Length = 305
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 116/263 (44%), Gaps = 20/263 (7%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LPLIY DY F H F K+ + +L G ++ P + L +
Sbjct: 1 MSLPLIYHEDYSPDF---PADHRFPMDKFRLLRDYLIDSGLTSDVQLMRPELCPADILAL 57
Query: 93 VHSESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
H SY+ S S + +P + L +R + + VGG++L A+ A +
Sbjct: 58 AHDPSYISRYLSGDLSREDQRRLGLP----WSEALARRTI-----RAVGGSLLTAEQALK 108
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKD 209
G A ++ GG HH D GFC + D+++ Y + +V+I D D HQG+G +
Sbjct: 109 HGLACHLAGGTHHAHYDYPAGFCIFNDLAVISQYLLQSGRVDKVLIFDCDVHQGDGTARI 168
Query: 210 FSSDSRVYILDMFNPGIYPRDYEARRF-IDQKVEVVSGTTTNEYLKKLDEALEVAGHTFD 268
+ + + +P AR+ D + + G +YL +D+ L +
Sbjct: 169 LADTEDAITVSLHCEKNFP----ARKAQSDWDIPLPMGMGDADYLNVVDDLLNYLLPLYK 224
Query: 269 PELVIYNAGTDILEGDPLGMLKV 291
P+LV+Y+AG D+ + D LG L++
Sbjct: 225 PDLVLYDAGVDVHKDDALGYLQL 247
>gi|399051324|ref|ZP_10741246.1| deacetylase, histone deacetylase/acetoin utilization protein
[Brevibacillus sp. CF112]
gi|433542917|ref|ZP_20499335.1| acetoin utilization protein AcuC [Brevibacillus agri BAB-2500]
gi|398050901|gb|EJL43246.1| deacetylase, histone deacetylase/acetoin utilization protein
[Brevibacillus sp. CF112]
gi|432185755|gb|ELK43238.1| acetoin utilization protein AcuC [Brevibacillus agri BAB-2500]
Length = 385
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 118/272 (43%), Gaps = 28/272 (10%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
LIYSPDY + + HPF+ + + +SS G L ++ ++ P A+ ++L +VH
Sbjct: 7 LIYSPDYTKYYFHDD--HPFNQRRLLLMHDLMSSYGLLTESDLLAPRMATDDELALVHDR 64
Query: 97 SYLKSLQSSPN--------VSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKL 146
Y++ ++ + +S + V F N ++ VGGT+ A A +
Sbjct: 65 RYIEFVREQGHSEAELPQAMSYGLGTEDVPCFRNMHESAALI------VGGTLNAVDAVM 118
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
E A N GG HH GFC Y D S+ I Y N +RVM ID DAH G+G
Sbjct: 119 QGEAAHAFNPAGGLHHAFRGRASGFCIYNDCSVAIAYLRKHWN-ARVMYIDTDAHHGDGV 177
Query: 207 EKDFSSDSRVYILDMFNPGIY---------PRDYEARRFIDQKVEVVSGTTTNEYLKKLD 257
+ F D V + + G Y R + V + + T + +L+ +
Sbjct: 178 QWAFYDDPNVLTVSIHETGKYLFPGTGNLSERGDGSGYGFSVNVPLDAFTEDDSFLEVYE 237
Query: 258 EALEVAGHTFDPELVIYNAGTDILEGDPLGML 289
E + H F P++++ G D DPL L
Sbjct: 238 ELVAKLAHGFKPDVILTQNGCDAHTFDPLTHL 269
>gi|94498520|ref|ZP_01305076.1| hypothetical protein SKA58_04476 [Sphingomonas sp. SKA58]
gi|94422063|gb|EAT07108.1| hypothetical protein SKA58_04476 [Sphingomonas sp. SKA58]
Length = 301
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 111/238 (46%), Gaps = 23/238 (9%)
Query: 60 KWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVAL 119
K+G + L+ G + P +E + VH +Y+ + I + VPP +
Sbjct: 28 KYGLVMDALTESG--TAMTVHTPEVMPREWIEAVHDPAYVDEV-------ISLSVPPEKM 78
Query: 120 ----FP--NCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCA 173
FP + + R +L P GGT AA+LAK G+A N GG HH D G G+C
Sbjct: 79 RRIGFPITDRVATRSLLSP-----GGTWAAARLAKIHGYAANAAGGSHHALHDTGAGYCV 133
Query: 174 YADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEA 233
+ D+++ + + ++I+DLD HQG+G + + V+ L + +P +A
Sbjct: 134 FNDLAIAATRLIAEGDAKHILILDLDVHQGDGTAALMAGRTDVFTLSIHAERNFPV-RKA 192
Query: 234 RRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
R +D +E G + Y+ L AL F P+L++Y AG D D LG L++
Sbjct: 193 RSSLDIGLE--DGIDDHGYMAVLTYALPRVLDDFAPDLILYQAGVDPHGEDRLGRLEL 248
>gi|91223676|ref|ZP_01258941.1| histone deacetylase/AcuC/AphA family protein [Vibrio alginolyticus
12G01]
gi|91191762|gb|EAS78026.1| histone deacetylase/AcuC/AphA family protein [Vibrio alginolyticus
12G01]
Length = 307
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 123/270 (45%), Gaps = 33/270 (12%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQ----FLSSEGFLDKNCIVEPLEASKEDL 90
LP IY P Y S L + + H + K+ + + + + + + +P + ++
Sbjct: 2 LPFIYHPIY--SQLELPEGHRYPIMKYQYLYESVLVHMEKDNWKEHTQFFQPEALTVGEV 59
Query: 91 LVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTIL 142
VH E Y++ L S +P + R++ +P+ + + GT L
Sbjct: 60 KRVHDEEYVELLVSG-------NMPAAKM-------RRIGFPWSESLITRTLTSAAGTAL 105
Query: 143 AAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQ 202
AK A E G AI++ GG+HH + G GFC + D+ + A ++ +V+IID D H
Sbjct: 106 TAKKALEYGVAIHLSGGYHHAHKEFGSGFCLFNDLVIAARQALEVEHVDKVLIIDSDVHH 165
Query: 203 GNGHEKDFSSDSRVYILDMFNPGIYPRDYEARR-FIDQKVEVVSGTTTNEYLKKLDEALE 261
G+G + + L +P AR+ D V +V GT ++L E ++
Sbjct: 166 GDGTATLCDDEPDIITLSFHCDKNFP----ARKPQSDLDVPMVRGTGDEDFLMAFKEVVD 221
Query: 262 VAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+A + P+LVIY+AG DI + D LG V
Sbjct: 222 MALNLHRPDLVIYDAGVDIHQDDELGYFDV 251
>gi|405355313|ref|ZP_11024539.1| Deacetylase [Chondromyces apiculatus DSM 436]
gi|397091655|gb|EJJ22457.1| Deacetylase [Myxococcus sp. (contaminant ex DSM 436)]
Length = 279
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 99/236 (41%), Gaps = 17/236 (7%)
Query: 60 KWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVAL 119
K+ + + L G L I E +EDL VH+ YL +L +
Sbjct: 3 KYRLLREALLERGVLSPAAITESTPCPREDLERVHTPRYLDALFHGTLTEAELRRLGFPW 62
Query: 120 FPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISL 179
P LVQR F V GTI A + A G N+ GG HH D G GFC + DI++
Sbjct: 63 SPG-LVQR-----FAAAVAGTIDAGRAALRDGIGGNLSGGTHHGFPDHGEGFCVFNDIAV 116
Query: 180 CIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQ 239
I + + R +++DLD HQGNG F+ D V+ M +P +
Sbjct: 117 AIRVLQAEGALRRAVVVDLDVHQGNGTAAVFAGDDAVFTFSMHGENNFPFRKQPSHL--- 173
Query: 240 KVEVVSGTTTNEYLKKLD----EALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
V + GT EYL L E L+ AG + + AG D L D LG L +
Sbjct: 174 DVGLPDGTGDAEYLDALALYLPEVLDRAGAC----ALFFQAGVDPLTEDALGRLSL 225
>gi|416018674|ref|ZP_11565602.1| histone deacetylase family protein [Pseudomonas syringae pv.
glycinea str. B076]
gi|416024596|ref|ZP_11568657.1| histone deacetylase family protein [Pseudomonas syringae pv.
glycinea str. race 4]
gi|422403310|ref|ZP_16480368.1| histone deacetylase family protein [Pseudomonas syringae pv.
glycinea str. race 4]
gi|320322646|gb|EFW78739.1| histone deacetylase family protein [Pseudomonas syringae pv.
glycinea str. B076]
gi|320330569|gb|EFW86548.1| histone deacetylase family protein [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330873527|gb|EGH07676.1| histone deacetylase family protein [Pseudomonas syringae pv.
glycinea str. race 4]
Length = 305
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 116/260 (44%), Gaps = 14/260 (5%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LPLIY DY F H F K+ + +L G ++ P + L +
Sbjct: 1 MSLPLIYHEDYSTDF---PADHRFPMDKFRLLRDYLVDSGLTSDVQLMRPELCPADILAL 57
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
H SY+ + ++S + + L +R V + VGG++L A+ A + G
Sbjct: 58 AHDPSYISRYLNG-DLSREDQRRLGLPWSEALARRTV-----RAVGGSLLTAEQALKHGM 111
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
A ++ GG HH D GFC + D+++ Y + +V+I D D HQG+G + +
Sbjct: 112 ACHLAGGTHHAHYDYPAGFCIFNDLAVISQYLLQSGRVDKVLIFDCDVHQGDGTARILAD 171
Query: 213 DSRVYILDMFNPGIYPRDYEARRF-IDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPEL 271
+ + +P AR+ D + + G +YL +D+ L + P+L
Sbjct: 172 TEDAITVSLHCEKNFP----ARKAQSDWDIPLPMGMGDADYLNVVDDLLNYLLPFYKPDL 227
Query: 272 VIYNAGTDILEGDPLGMLKV 291
V+Y+AG D+ + D LG L++
Sbjct: 228 VLYDAGVDVHKDDALGYLQL 247
>gi|17540332|ref|NP_500787.1| Protein HDA-6, isoform b [Caenorhabditis elegans]
gi|30923304|sp|Q20296.2|HDA6_CAEEL RecName: Full=Histone deacetylase 6
gi|351063052|emb|CCD71099.1| Protein HDA-6, isoform b [Caenorhabditis elegans]
Length = 955
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 128/277 (46%), Gaps = 23/277 (8%)
Query: 37 LIYSPDYDISFLGIEK-LHPFDSSKWGRICQFLSSEGFLDKNCIVEPLE--ASKEDLLVV 93
LIY + D + +E+ HP ++ RI + L G L+K C+ E A+ E++ +V
Sbjct: 428 LIYFNEGDDAHFDLEEDNHPEKPARTRRILKTLRESGVLEK-CVDRNCERIATNEEIRLV 486
Query: 94 HSESYLKSLQSSPNVS-IIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAA-----KLA 147
H++ L+ L+++ + + F + + R L RK VG + + K A
Sbjct: 487 HTKKMLEHLRTTETMKDEELMEEAEKEFNSIYLTRDTLKVARKAVGAVLQSVDEIFEKDA 546
Query: 148 KERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHE 207
+R + V HH SA + GFC + ++++ YA + RV+I+D D H GNG +
Sbjct: 547 GQRNALVIVRPPGHHASASKSSGFCIFNNVAVAAKYAQRRHKAKRVLILDWDVHHGNGTQ 606
Query: 208 KDFSSDSRVYILDM-------FNPGIYPRDY-EARRFIDQKVEV---VSGTTT--NEYLK 254
+ F DS V + + F P P+DY + + + V SG NEY
Sbjct: 607 EIFYEDSNVMYMSIHRHDKGNFYPIGEPKDYSDVGEGAGEGMSVNVPFSGVQMGDNEYQM 666
Query: 255 KLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ + F+P+LV+ +AG D DPLG KV
Sbjct: 667 AFQRVIMPIAYQFNPDLVLISAGFDAAVDDPLGEYKV 703
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 109/259 (42%), Gaps = 34/259 (13%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEP-LEASKEDLLVVHSESYLKSLQSSPNV---- 108
HP S + +I + L+ L+K ++ LE DL V H +S +K L S
Sbjct: 34 HPESSDRILKIKEALTKTKILEKCTVLTNFLEIDDADLEVTHDKSMVKDLMESEKKTQED 93
Query: 109 --SIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSAD 166
S + V + N + K + + I+A + + G+A+ G HH +
Sbjct: 94 INSQCEKYDSVFMTENSMKVAKDGVACVRDLTNRIMANEASN--GFAVVRPPG-HHADSV 150
Query: 167 EGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILD------ 220
GFC + +++ AF R++I+DLD H G+G ++ F D RV
Sbjct: 151 SPCGFCLFNNVAQAAEEAFFS-GAERILIVDLDVHHGHGTQRIFYDDKRVLYFSIHRHEH 209
Query: 221 -MFNPGIYPRD-----------YEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFD 268
+F P + D Y A +++ +G T ++YL + L FD
Sbjct: 210 GLFWPHLPESDFDHIGSGKGLGYNANLALNE-----TGCTDSDYLSIIFHVLLPLATQFD 264
Query: 269 PELVIYNAGTDILEGDPLG 287
P VI +AG D L GDPLG
Sbjct: 265 PHFVIISAGFDALLGDPLG 283
>gi|226185406|dbj|BAH33510.1| putative acetoin utilization protein [Rhodococcus erythropolis PR4]
Length = 423
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 127/278 (45%), Gaps = 34/278 (12%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
+++SP+Y +S+ HP + ++ S G L+ +EP AS DLL +H+
Sbjct: 20 VVWSPEY-LSYR-WSADHPMNPTRLDLTMALSRSLGLLEGIEFLEPSAASDADLLRIHTP 77
Query: 97 SYLKSLQSSPNVS------------IIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAA 144
+YL +++ + N + + E PV FP+ +L GG++ AA
Sbjct: 78 AYLAAVKDAGNSANNGVSGQDVPHGLGTEDNPV--FPHMHEASAIL------AGGSLAAA 129
Query: 145 K-LAKERGW-AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQ 202
+ +A R A+++GGG HH AD GFC Y D ++ I + + R+ ID+DAH
Sbjct: 130 QEIASGRTRRAVSIGGGMHHAMADWASGFCVYNDAAVAISW-LLDNGYDRIAYIDVDAHH 188
Query: 203 GNGHEKDFSSDSRVYILDMF-NPG-IYPRDYEARRFIDQKVE-------VVSGTTTNEYL 253
G+G + F D RV + + +P ++P + D E V+ GT +L
Sbjct: 189 GDGVQHAFLGDPRVLTVSLHQHPATLWPNTGWSSEVGDGAAEGTAVNIPVLPGTVDALWL 248
Query: 254 KKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ + A F P+++I G D DPL L +
Sbjct: 249 RAFHAVVPGAIAAFRPQIIISQCGVDSHREDPLADLAL 286
>gi|193206283|ref|NP_001122780.1| Protein HDA-6, isoform c [Caenorhabditis elegans]
gi|351063059|emb|CCD71106.1| Protein HDA-6, isoform c [Caenorhabditis elegans]
Length = 957
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 128/277 (46%), Gaps = 23/277 (8%)
Query: 37 LIYSPDYDISFLGIEK-LHPFDSSKWGRICQFLSSEGFLDKNCIVEPLE--ASKEDLLVV 93
LIY + D + +E+ HP ++ RI + L G L+K C+ E A+ E++ +V
Sbjct: 430 LIYFNEGDDAHFDLEEDNHPEKPARTRRILKTLRESGVLEK-CVDRNCERIATNEEIRLV 488
Query: 94 HSESYLKSLQSSPNVS-IIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAA-----KLA 147
H++ L+ L+++ + + F + + R L RK VG + + K A
Sbjct: 489 HTKKMLEHLRTTETMKDEELMEEAEKEFNSIYLTRDTLKVARKAVGAVLQSVDEIFEKDA 548
Query: 148 KERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHE 207
+R + V HH SA + GFC + ++++ YA + RV+I+D D H GNG +
Sbjct: 549 GQRNALVIVRPPGHHASASKSSGFCIFNNVAVAAKYAQRRHKAKRVLILDWDVHHGNGTQ 608
Query: 208 KDFSSDSRVYILDM-------FNPGIYPRDY-EARRFIDQKVEV---VSGTTT--NEYLK 254
+ F DS V + + F P P+DY + + + V SG NEY
Sbjct: 609 EIFYEDSNVMYMSIHRHDKGNFYPIGEPKDYSDVGEGAGEGMSVNVPFSGVQMGDNEYQM 668
Query: 255 KLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ + F+P+LV+ +AG D DPLG KV
Sbjct: 669 AFQRVIMPIAYQFNPDLVLISAGFDAAVDDPLGEYKV 705
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 110/261 (42%), Gaps = 36/261 (13%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEP-LEASKEDLLVVHSESYLKSLQSSPNVS--- 109
HP S + +I + L+ L+K ++ LE DL V H +S +K L S +
Sbjct: 34 HPESSDRILKIKEALTKTKILEKCTVLTNFLEIDDADLEVTHDKSMVKDLMESEKKTQED 93
Query: 110 IIIEVPP-----VALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCS 164
I + + F N + K + + I+A + + G+A+ G HH
Sbjct: 94 INSQCEKYDSVFMTEFQNSMKVAKDGVACVRDLTNRIMANEASN--GFAVVRPPG-HHAD 150
Query: 165 ADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILD---- 220
+ GFC + +++ AF R++I+DLD H G+G ++ F D RV
Sbjct: 151 SVSPCGFCLFNNVAQAAEEAFFS-GAERILIVDLDVHHGHGTQRIFYDDKRVLYFSIHRH 209
Query: 221 ---MFNPGIYPRD-----------YEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHT 266
+F P + D Y A +++ +G T ++YL + L
Sbjct: 210 EHGLFWPHLPESDFDHIGSGKGLGYNANLALNE-----TGCTDSDYLSIIFHVLLPLATQ 264
Query: 267 FDPELVIYNAGTDILEGDPLG 287
FDP VI +AG D L GDPLG
Sbjct: 265 FDPHFVIISAGFDALLGDPLG 285
>gi|424073895|ref|ZP_17811308.1| histone deacetylase [Pseudomonas syringae pv. avellanae str.
ISPaVe037]
gi|407995284|gb|EKG35818.1| histone deacetylase [Pseudomonas syringae pv. avellanae str.
ISPaVe037]
Length = 305
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 116/260 (44%), Gaps = 14/260 (5%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LPLIY DY F H F K+ + +L G ++ P + L +
Sbjct: 1 MSLPLIYHEDYSPDF---PADHRFPMDKFRLLRDYLIDSGLTSDVQLMRPELCPADILAL 57
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
H SY+ S ++S + + L +R + + VGG++L A+ A G
Sbjct: 58 AHDPSYISRYLSG-DLSREDQRRLGLPWSEALARRTI-----RAVGGSLLTAEQALTHGL 111
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
A ++ GG HH D GFC + D+++ Y + +V+I D D HQG+G + +
Sbjct: 112 ACHLAGGTHHAHYDYPAGFCIFNDLAVISQYLLQSGRVDKVLIFDCDVHQGDGTARILAD 171
Query: 213 DSRVYILDMFNPGIYPRDYEARRF-IDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPEL 271
+ + + +P AR+ D + + G +YL +D+ L + P+L
Sbjct: 172 NEDAITVSLHCEKNFP----ARKAQSDWDIPLPMGMGDADYLNVVDDLLNYLLPFYKPDL 227
Query: 272 VIYNAGTDILEGDPLGMLKV 291
V+Y+AG D+ + D LG L++
Sbjct: 228 VLYDAGVDVHKDDALGYLQL 247
>gi|422660331|ref|ZP_16722745.1| histone deacetylase family protein [Pseudomonas syringae pv.
lachrymans str. M302278]
gi|331018938|gb|EGH98994.1| histone deacetylase family protein [Pseudomonas syringae pv.
lachrymans str. M302278]
Length = 305
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 117/262 (44%), Gaps = 18/262 (6%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LPLIY DY +F + H F K+ + +L G ++ P + L +
Sbjct: 1 MSLPLIYHDDYSPAF---AQDHRFPMDKFRLLRDYLVDSGLTRDVQLMRPELCPVDILAL 57
Query: 93 VHSESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
H SY+ S S + +P + L +R + + VGG++L A+ A
Sbjct: 58 AHDPSYISRYLSGDLSREDQRRLGLP----WSEALARRTI-----RAVGGSLLTAEQALT 108
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKD 209
G A ++ GG HH D GFC + D+++ Y + +V+I D D HQG+G +
Sbjct: 109 HGLACHLAGGTHHAHYDYPAGFCIFNDLAVISQYLLQSGRVGKVLIFDCDVHQGDGTARI 168
Query: 210 FSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDP 269
+ + + +P +AR D + + G +YL +D+ L + P
Sbjct: 169 LADTEDAITVSLHCEKNFPA-RKARS--DWDIPLPMGMGDADYLNVVDDLLNYLLPFYKP 225
Query: 270 ELVIYNAGTDILEGDPLGMLKV 291
+LV+Y+AG D+ + D LG L++
Sbjct: 226 DLVLYDAGVDVHKDDALGYLQL 247
>gi|432921060|ref|XP_004080033.1| PREDICTED: histone deacetylase 8-like [Oryzias latipes]
Length = 394
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 107/234 (45%), Gaps = 17/234 (7%)
Query: 67 FLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQ--SSPNVSIIIEVPPVALFPNCL 124
+ + G LD V+P A+ E++ H++SYL+ L S + + L +C
Sbjct: 41 LIEAYGLLDHMSTVKPRVATMEEMSKFHTDSYLEHLHKISQDGDNDDPQSADFGLGYDCP 100
Query: 125 VQRKVLYPFRKQVGGTILAAK---LAKERGWAINVGGGFHHCSADEGGGFCAYADISLCI 181
V + Y + VGG L A L ++ AIN GG+HH DE GFC D L I
Sbjct: 101 VTEGI-YDYAASVGGATLTAAQCLLDQKCDVAINWAGGWHHAKKDEASGFCYVNDAVLGI 159
Query: 182 HYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDM--FNPGIYPRDYE------- 232
++ RV+ +D+D H G+G E+ FS S+V + + F+PG +P +
Sbjct: 160 --LKLREKYERVLYVDVDLHHGDGVEEAFSFTSKVMTVSLHKFSPGFFPGTGDLCDTGLG 217
Query: 233 ARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPL 286
R+ V + G + Y + L+ F+PE ++ G D + GDP+
Sbjct: 218 KGRWYAVNVPLEDGIKDDRYYQVFTSVLQEVRAQFNPEALVMQLGADTMAGDPM 271
>gi|422648104|ref|ZP_16711229.1| histone deacetylase family protein [Pseudomonas syringae pv.
maculicola str. ES4326]
gi|330961643|gb|EGH61903.1| histone deacetylase family protein [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 305
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 116/260 (44%), Gaps = 14/260 (5%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LPLIY DY +F H F K+ + +L G ++ P + L +
Sbjct: 1 MSLPLIYHDDYSPAF---PADHRFPMDKFRLLRDYLVDSGLTRDVQLIRPELCPTDILAL 57
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
H SY+ S ++S + + L +R + + VGG++L A+ A G
Sbjct: 58 AHDPSYIGRYLSG-DLSREDQRRLGLPWSEALARRTI-----RAVGGSLLTAEKALTHGM 111
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
A ++ GG HH D GFC + D+++ HY + +++I D D HQG+G + +
Sbjct: 112 ACHLAGGTHHAHYDYPAGFCIFNDLAVISHYLLQSGRVHKILIFDCDVHQGDGTARILAD 171
Query: 213 DSRVYILDMFNPGIYPRDYEARRF-IDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPEL 271
+ + +P AR+ D + + G YL +D+ L + P+L
Sbjct: 172 TEDAITVSLHCEKNFP----ARKAQSDWDIPLPMGMGDVGYLNVVDDLLNYLLPFYKPDL 227
Query: 272 VIYNAGTDILEGDPLGMLKV 291
V+Y+AG D+ + D LG L++
Sbjct: 228 VLYDAGVDVHKDDALGYLQL 247
>gi|294056259|ref|YP_003549917.1| histone deacetylase superfamily protein [Coraliomargarita
akajimensis DSM 45221]
gi|293615592|gb|ADE55747.1| histone deacetylase superfamily [Coraliomargarita akajimensis DSM
45221]
Length = 302
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 119/262 (45%), Gaps = 25/262 (9%)
Query: 38 IYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSES 97
Y PDY FL + + HPF K+ + + E D+ I P++ ++ DL H
Sbjct: 4 FYHPDY---FLPLPEGHPFPMEKFPQ-----AYERLKDQLRIAPPMDLTRADLERAHCPH 55
Query: 98 YLKSL-----QSSPNVSIIIEVPPVALFPNC-LVQRKVLYPFRKQVGGTILAAKLAKERG 151
YL ++ ++ P+ + + + L N L+ R L + GT+ A A E G
Sbjct: 56 YLDAVSFDDDRNHPHGLLSYDRNRLGLPANPQLLTRSTL-----ETAGTVAATLHALEHG 110
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNI-SRVMIIDLDAHQGNGHEKDF 210
A N+ GG HH D+G GFC DI++ I Y ++I+D DAHQGN + F
Sbjct: 111 CAANLAGGTHHAFPDKGLGFCVLNDIAVAIEYLRAHGRCPDHILIVDTDAHQGNANNAYF 170
Query: 211 SSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEAL-EVAGHTFDP 269
D V+ + YP E D + + + +YL L+ +L ++ HT +P
Sbjct: 171 RDDPSVFTYSIHVGKNYPAKKEPG---DCDIPLPRWVESADYLDALNNSLPKIFAHT-EP 226
Query: 270 ELVIYNAGTDILEGDPLGMLKV 291
+LV + G D D G +++
Sbjct: 227 DLVFWIHGADCHHDDRFGQMRL 248
>gi|669045|emb|CAA78369.1| Portion of hypothetical protein [Synechococcus sp. PCC 7002]
Length = 278
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 101/228 (44%), Gaps = 15/228 (6%)
Query: 67 FLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQS---SPNVSIIIEVPPVALFPNC 123
L +G + + +P + L +VH Y+ + +P I +P +
Sbjct: 10 LLLEDGVIQPEQVYQPQLPDRAWLELVHEPDYVTAYCQGTLTPKAQRRIGLP----WSAG 65
Query: 124 LVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHY 183
+VQR + VGGTIL A+LA E G A N GG HH G GFC D+++
Sbjct: 66 VVQRTL-----TAVGGTILTAQLALEHGLACNTAGGTHHAFPGYGSGFCILNDLAIATRT 120
Query: 184 AFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV 243
+ R++I+DLD HQG+G F D V+ M +P ++ D + +
Sbjct: 121 IQQRGLAQRILIVDLDVHQGDGTAFIFQDDPTVFTFSMHCEVNFP---SQKQRSDLDLGL 177
Query: 244 VSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
G + YL+ L LE P+LV Y+AG D GD LG L +
Sbjct: 178 PEGLDDDGYLQILAHHLEDLLSQVKPDLVFYDAGVDTHVGDRLGKLAM 225
>gi|325282956|ref|YP_004255497.1| Histone deacetylase [Deinococcus proteolyticus MRP]
gi|324314765|gb|ADY25880.1| Histone deacetylase [Deinococcus proteolyticus MRP]
Length = 307
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 75/157 (47%), Gaps = 3/157 (1%)
Query: 135 KQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVM 194
+ GG++ A A+ GW N+ GG HH AD GGFC D ++ A + RV
Sbjct: 100 RAAGGSLAALHDARAVGWGANLAGGTHHAFADRAGGFCLVNDAAILTRLALDEGWAQRVA 159
Query: 195 IIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLK 254
++DLD HQG+G + R + L + YP E R +D + + G T EYL
Sbjct: 160 VLDLDVHQGDGTAALLEHEPRAFTLSIHGERNYPFRKE-RSSLD--LGLGDGVTDAEYLT 216
Query: 255 KLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
L A F P+L++Y AG D+L GD G +
Sbjct: 217 VLRTQALPALEAFRPDLLLYLAGADVLAGDRFGRFAL 253
>gi|302525553|ref|ZP_07277895.1| acetoin dehydrogenase [Streptomyces sp. AA4]
gi|302434448|gb|EFL06264.1| acetoin dehydrogenase [Streptomyces sp. AA4]
Length = 417
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 112/255 (43%), Gaps = 26/255 (10%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVS---- 109
HPF+ + + + G LD ++ P A E+LL VH+ YL +++ +PNV
Sbjct: 48 HPFNPVRLDLTVRLATELGVLDGVELLVPTAAGDEELLRVHAPEYLAAVREAPNVGWDVG 107
Query: 110 --IIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAA-KLAK-ERGWAINVGGGFHHCSA 165
+ + PV FP ++ VG T+LAA K+A E A+N+ GG HH
Sbjct: 108 HGLGTDDNPV--FPGMHDATALV------VGSTLLAARKIADGEVRRAVNIAGGLHHAMR 159
Query: 166 DEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN-- 223
D GFC Y D ++ I + + R+ +D D H G+G + F D RV + M
Sbjct: 160 DHASGFCIYNDCAIAISW-LLDHGFDRIAYVDTDVHHGDGVQAAFYDDPRVLTVSMHQHP 218
Query: 224 ----PGI-YPRDYEARRFIDQKVEVVSGTTTNE--YLKKLDEALEVAGHTFDPELVIYNA 276
PG Y + + V V T + +L+ D + F P+L++
Sbjct: 219 FTLWPGTGYSAEIGKGKAAGTAVNVPLPPHTQDPGWLRAFDAVVPAVLQEFQPQLLVTQC 278
Query: 277 GTDILEGDPLGMLKV 291
G D E DP+ + +
Sbjct: 279 GVDSHEEDPMADMSL 293
>gi|229490824|ref|ZP_04384659.1| acetoin dehydrogenase [Rhodococcus erythropolis SK121]
gi|453070912|ref|ZP_21974139.1| acetoin utilization protein [Rhodococcus qingshengii BKS 20-40]
gi|229322214|gb|EEN88000.1| acetoin dehydrogenase [Rhodococcus erythropolis SK121]
gi|452759995|gb|EME18338.1| acetoin utilization protein [Rhodococcus qingshengii BKS 20-40]
Length = 423
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 127/278 (45%), Gaps = 34/278 (12%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
+++SP+Y +S+ HP + ++ S G L+ +EP AS DLL +H+
Sbjct: 20 VVWSPEY-LSYR-WSADHPMNPTRLDLTMALSRSLGLLEGIEFLEPSAASDADLLRIHTP 77
Query: 97 SYLKSLQSSPNVS------------IIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAA 144
+YL +++ + N + + E PV FP+ +L GG++ AA
Sbjct: 78 AYLAAVKDAGNSANNGVSGQDVPHGLGTEDNPV--FPHMHEASAIL------AGGSLAAA 129
Query: 145 K-LAKERGW-AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQ 202
+ +A R A+++GGG HH AD GFC Y D ++ I + + R+ ID+DAH
Sbjct: 130 QEIASGRTRRAVSIGGGMHHAMADWASGFCVYNDAAVAISW-LLDNGYDRIAYIDVDAHH 188
Query: 203 GNGHEKDFSSDSRVYILDMF-NPG-IYPRDYEARRFIDQKVE-------VVSGTTTNEYL 253
G+G + F D RV + + +P ++P + D E V+ GT +L
Sbjct: 189 GDGVQHAFLGDPRVLTVSLHQHPATLWPNTGWSSEVGDGAAEGTAVNIPVLPGTVDALWL 248
Query: 254 KKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ + A F P+++I G D DPL L +
Sbjct: 249 RAFHAVVPGAIAAFRPQIIISQCGVDSHREDPLADLAL 286
>gi|146281268|ref|YP_001171421.1| histone deacetylase family protein [Pseudomonas stutzeri A1501]
gi|145569473|gb|ABP78579.1| histone deacetylase family protein [Pseudomonas stutzeri A1501]
Length = 306
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 111/259 (42%), Gaps = 12/259 (4%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LPL+Y DY + H F K+ + L + G ++ P ++ L +
Sbjct: 1 MSLPLVYHDDYSPP---LPPGHRFPMEKFRLLRDHLVTLGMTTDAALLRPSLCRRDILTL 57
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
H Y+ S + + P L QR V + VGG++LAA+ A + G
Sbjct: 58 AHDADYVARYCSGEMGRDELRRLGLPWSPE-LAQRTV-----RAVGGSLLAAEQALQHGL 111
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
A ++ GG HH D GFC + D+++ Y + RV+I D D HQG+G + +
Sbjct: 112 ACHLAGGTHHAHRDHASGFCIFNDLAVIALYLLESGLVGRVLIFDCDVHQGDGTARILEN 171
Query: 213 DSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELV 272
+ + +P + D + + G YL+ + + L + P+LV
Sbjct: 172 VPDAVTVSLHCEKNFP---TRKAHSDWDIPLPPGMGDEAYLQVVHDTLNYLLPIYQPDLV 228
Query: 273 IYNAGTDILEGDPLGMLKV 291
+Y+AG D+ D LG+L +
Sbjct: 229 LYDAGVDVHRDDALGLLSL 247
>gi|444375853|ref|ZP_21175105.1| Histone deacetylase/AcuC/AphA family protein [Enterovibrio sp.
AK16]
gi|443680081|gb|ELT86729.1| Histone deacetylase/AcuC/AphA family protein [Enterovibrio sp.
AK16]
Length = 306
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 115/263 (43%), Gaps = 25/263 (9%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LP+IY P Y S + + H + K+ + + + G+ +P + L H
Sbjct: 2 LPIIYHPIY--SDFPLPEGHRYPLQKYRLLKEHIDEMGW--PVTTFQPTRLDHQHLKRFH 57
Query: 95 SESYLKSLQSSPNVSIIIEVPPVAL----FP--NCLVQRKVLYPFRKQVGGTILAAKLAK 148
Y+ +L S +P V + FP L+QR + +GGT L A
Sbjct: 58 DNDYVDALVSG-------SLPLVKMRRIGFPWSEALIQRSL-----TSLGGTTLTVDKAI 105
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEK 208
E G A+++ GG+HH D G GFC + D+ L +A NI +V+I+D D H G+G
Sbjct: 106 EHGVAVHLTGGYHHSHKDFGSGFCLFNDLILAADHALSYPNIDKVLIVDCDVHHGDGTAT 165
Query: 209 DFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFD 268
+ L + +P + D + + G ++ YL + L +A
Sbjct: 166 LAQKREDIITLSVHCDKNFP---SRKPDSDIDIPMPIGVESDTYLSEFVPVLTLAIAQHQ 222
Query: 269 PELVIYNAGTDILEGDPLGMLKV 291
P++VIY+AG DI D LG + V
Sbjct: 223 PDMVIYDAGVDIHVDDELGYMNV 245
>gi|398384724|ref|ZP_10542752.1| deacetylase, histone deacetylase/acetoin utilization protein
[Sphingobium sp. AP49]
gi|397722004|gb|EJK82549.1| deacetylase, histone deacetylase/acetoin utilization protein
[Sphingobium sp. AP49]
Length = 299
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 100/205 (48%), Gaps = 15/205 (7%)
Query: 90 LLVVHSESYLK---SLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKL 146
+ VH +Y+ +L P+ I P +++R +L P GGT +AA+L
Sbjct: 52 IAAVHDPAYVDEVLALAVPPDKERRIGFP----VTEAVMRRSLLSP-----GGTWMAARL 102
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
A G+A N GG HH AD G G+C + D+++ + + + + ++I+DLD HQG+G
Sbjct: 103 ALTHGYAANGAGGSHHALADTGAGYCIFNDLAIAANRLIAEGDAAHILILDLDVHQGDGT 162
Query: 207 EKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHT 266
+ V+ L + +P +AR +D + + GT EYL L + L
Sbjct: 163 ASLMAGRGDVFTLSIHAERNFPV-RKARSTLD--LGLADGTGDAEYLAALADILPRVLDD 219
Query: 267 FDPELVIYNAGTDILEGDPLGMLKV 291
F P+L++Y AG D D LG L +
Sbjct: 220 FMPDLILYQAGIDSHVDDRLGRLAL 244
>gi|372489509|ref|YP_005029074.1| deacetylase [Dechlorosoma suillum PS]
gi|359356062|gb|AEV27233.1| deacetylase, histone deacetylase/acetoin utilization protein
[Dechlorosoma suillum PS]
Length = 300
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 119/260 (45%), Gaps = 19/260 (7%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+ L YS D L + H F K+ R+ Q L EG+ + I+ P AS+EDL H
Sbjct: 1 MQLFYS---DTFVLPLPPGHRFPMEKYARLRQTLLDEGYPPADFIL-PEAASREDLCRAH 56
Query: 95 SESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
+Y++ + S +P I P + + +V+R R+ G T+ A + A G
Sbjct: 57 DPAYVERVCSGRLTPEEMRQIGFP----WSDAMVERP-----RRSAGATLGACRAALAEG 107
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
W +N+ GG HH + G GFC + D ++ Q + +V +ID D HQG+G +
Sbjct: 108 WGVNLAGGTHHAAHAAGAGFCVFNDAAVAARALQAQGRVGQVAVIDCDVHQGDGTARILE 167
Query: 212 SDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPEL 271
D+ V+ + YP A+ D +E+ G YL L++ L P+L
Sbjct: 168 GDASVFTFSIHGARNYP---FAKARSDLDIELPDGCDDAAYLAALEQGLADLFSRCRPQL 224
Query: 272 VIYNAGTDILEGDPLGMLKV 291
IY AG D GD LG L +
Sbjct: 225 AIYLAGADPYAGDRLGRLSL 244
>gi|348540609|ref|XP_003457780.1| PREDICTED: histone deacetylase 8-like [Oreochromis niloticus]
Length = 379
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 121/267 (45%), Gaps = 21/267 (7%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
++ +YSP+Y + + K+ ++ + + + G L IV+P A+ E++
Sbjct: 17 RVAYVYSPEYIQTCDTLSKV----PNRASMVHSLIEAYGLLQHMSIVKPHVATIEEMAKF 72
Query: 94 HSESYLKSLQ--SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK---LAK 148
H++SYL+ L S + + L +C V + + + VGG L A L +
Sbjct: 73 HTDSYLEHLHKISQDGDNDDPQSADYGLGYDCPVVEGI-FDYAAGVGGATLTAAQTLLDQ 131
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEK 208
+ AIN GG+HH DE GFC D L I ++ RV+ +D+D H G+G E
Sbjct: 132 KCDVAINWAGGWHHAKKDEASGFCYVNDAVLGI--LRLREKYERVLYVDVDLHHGDGVED 189
Query: 209 DFSSDSRVYILDM--FNPGIYPRDYE-------ARRFIDQKVEVVSGTTTNEYLKKLDEA 259
FS S+V + + F+PG +P + R+ V + G + Y +
Sbjct: 190 AFSFTSKVMTVSLHKFSPGFFPGTGDLCDTGLGKGRWYAVNVPLEDGIKDDRYYQVFTSV 249
Query: 260 LEVAGHTFDPELVIYNAGTDILEGDPL 286
L+ F+PE ++ G D + GDP+
Sbjct: 250 LQEVRAQFNPEAIVMQLGADTMAGDPM 276
>gi|422616032|ref|ZP_16684739.1| histone deacetylase superfamily protein [Pseudomonas syringae pv.
japonica str. M301072]
gi|440722310|ref|ZP_20902692.1| histone deacetylase superfamily protein [Pseudomonas syringae
BRIP34876]
gi|440726023|ref|ZP_20906281.1| histone deacetylase superfamily protein [Pseudomonas syringae
BRIP34881]
gi|443642248|ref|ZP_21126098.1| Histone deacetylase family protein [Pseudomonas syringae pv.
syringae B64]
gi|330895528|gb|EGH27838.1| histone deacetylase superfamily protein [Pseudomonas syringae pv.
japonica str. M301072]
gi|440361499|gb|ELP98726.1| histone deacetylase superfamily protein [Pseudomonas syringae
BRIP34876]
gi|440367406|gb|ELQ04469.1| histone deacetylase superfamily protein [Pseudomonas syringae
BRIP34881]
gi|443282265|gb|ELS41270.1| Histone deacetylase family protein [Pseudomonas syringae pv.
syringae B64]
Length = 305
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 116/260 (44%), Gaps = 14/260 (5%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LPLIY DY F H F K+ + +L G ++ P + L +
Sbjct: 1 MSLPLIYHEDYSPEF---PADHRFPMDKFRLLRDYLIDSGLTSDVQLMRPELCPADILAL 57
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
H SY+ S ++S + + L +R + + VGG++L A+ A + G
Sbjct: 58 AHDPSYISRYLSG-DLSREDQRRLGLPWSEALARRTI-----RAVGGSLLTAEQALKHGL 111
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
A ++ GG HH D GFC + D+++ Y + +V+I D D HQG+G + +
Sbjct: 112 ACHLAGGTHHAHYDYPAGFCIFNDLAVISQYLLQSGRVDKVLIFDCDVHQGDGTARILAD 171
Query: 213 DSRVYILDMFNPGIYPRDYEARRF-IDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPEL 271
+ + +P AR+ D + + G +YL +D+ L + P+L
Sbjct: 172 TEDAITVSLHCEKNFP----ARKAQSDWDIPLPMGMGDADYLNVVDDLLNYLLPFYKPDL 227
Query: 272 VIYNAGTDILEGDPLGMLKV 291
V+Y+AG D+ + D LG L++
Sbjct: 228 VLYDAGVDVHKDDALGYLQL 247
>gi|28871794|ref|NP_794413.1| histone deacetylase family protein [Pseudomonas syringae pv. tomato
str. DC3000]
gi|28855046|gb|AAO58108.1| histone deacetylase family protein [Pseudomonas syringae pv. tomato
str. DC3000]
Length = 305
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 117/263 (44%), Gaps = 20/263 (7%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LPLIY DY +F + H F K+ + +L G ++ P + L +
Sbjct: 1 MSLPLIYHDDYSPAF---AQDHRFPMDKFRLLRDYLVDSGLTRDVQLMRPELCPVDILAL 57
Query: 93 VHSESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
H SY+ S S + +P + L +R + + VGG++L A+ A
Sbjct: 58 AHDPSYISRYLSGDLSREDQRRLGLP----WSEALARRTI-----RAVGGSLLTAEQALT 108
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKD 209
G A ++ GG HH D GFC + D+++ Y + +V+I D D HQG+G +
Sbjct: 109 HGLACHLAGGTHHAHYDYPAGFCIFNDLAVISQYLLQSGRVGKVLIFDCDVHQGDGTARI 168
Query: 210 FSSDSRVYILDMFNPGIYPRDYEARRF-IDQKVEVVSGTTTNEYLKKLDEALEVAGHTFD 268
+ + + +P AR+ D + + G +YL +D+ L +
Sbjct: 169 LADTEDAITVSLHCEKNFP----ARKAQSDWDIPLPMGMGDADYLNVVDDLLNYLLPFYK 224
Query: 269 PELVIYNAGTDILEGDPLGMLKV 291
P+LV+Y+AG D+ + D LG L++
Sbjct: 225 PDLVLYDAGVDVHKDDALGYLQL 247
>gi|213966783|ref|ZP_03394934.1| histone deacetylase family protein [Pseudomonas syringae pv. tomato
T1]
gi|301383292|ref|ZP_07231710.1| histone deacetylase family protein [Pseudomonas syringae pv. tomato
Max13]
gi|302062469|ref|ZP_07254010.1| histone deacetylase family protein [Pseudomonas syringae pv. tomato
K40]
gi|302133451|ref|ZP_07259441.1| histone deacetylase family protein [Pseudomonas syringae pv. tomato
NCPPB 1108]
gi|213928633|gb|EEB62177.1| histone deacetylase family protein [Pseudomonas syringae pv. tomato
T1]
Length = 305
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 117/260 (45%), Gaps = 14/260 (5%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LPLIY DY +F + H F K+ + +L G ++ P + L +
Sbjct: 1 MSLPLIYHDDYSPAF---AQDHRFPMDKFRLLRDYLVDSGLTRDVQLMRPELCPVDILAL 57
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
H SY+ S ++S + + L +R + + VGG++L A+ A G
Sbjct: 58 AHDPSYISRYLSG-DLSREDQRRLGLPWSEALARRTI-----RAVGGSLLTAEQALTHGL 111
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
A ++ GG HH D GFC + D+++ Y + +V+I D D HQG+G + +
Sbjct: 112 ACHLAGGTHHAHYDYPAGFCIFNDLAVISQYLLQSGRVGKVLIFDCDVHQGDGTARILAD 171
Query: 213 DSRVYILDMFNPGIYPRDYEARRF-IDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPEL 271
+ + +P AR+ D + + G +YL +D+ L + P+L
Sbjct: 172 TEDAITVSLHCEKNFP----ARKAQSDWDIPLPMGMGDADYLNVVDDLLNYLLPFYKPDL 227
Query: 272 VIYNAGTDILEGDPLGMLKV 291
V+Y+AG D+ + D LG L++
Sbjct: 228 VLYDAGVDVHKDDALGYLQL 247
>gi|254452992|ref|ZP_05066429.1| histone deacetylase superfamily [Octadecabacter arcticus 238]
gi|198267398|gb|EDY91668.1| histone deacetylase superfamily [Octadecabacter arcticus 238]
Length = 301
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 117/265 (44%), Gaps = 26/265 (9%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
++P++Y+ YD + H F+ +K+ ++ L F + + ED+
Sbjct: 3 QIPVVYNDAYDFH---VPPTHRFNGTKFSKLVNHLQRSDFSKQLDFIHSSPVRYEDIKRA 59
Query: 94 HSESYLKSLQSSPNVSIIIEVPPVALFPNC-LVQRKVLYPFRKQVGGTILAAKLAKERGW 152
H+ Y++ + + + EV + L N L++R L + GT A A + G
Sbjct: 60 HANDYVQRVATG--ALLREEVRQINLPINTQLIKRSFL-----ALNGTYKTALKALQTGV 112
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLN------ISRVMIIDLDAHQGNGH 206
A + GG HH G GFC + D+ AF LN + V+I+DLD HQG+G
Sbjct: 113 ACHAAGGTHHAHYSHGSGFCVFNDL------AFTALNLIEHGMVETVLILDLDVHQGDGT 166
Query: 207 EKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHT 266
+Y + +P ++ R+ + V + S N YL +L L
Sbjct: 167 IDICHGKRGIYTCSLHCEQNFP--FQKRQGT-RDVPLDSHLEDNAYLDQLHRTLADISRD 223
Query: 267 FDPELVIYNAGTDILEGDPLGMLKV 291
F P+LV+Y+AG D+ GD LG L +
Sbjct: 224 FTPQLVLYDAGVDVFLGDQLGNLDL 248
>gi|375130376|ref|YP_004992476.1| histone deacetylase/AcuC/AphA family protein [Vibrio furnissii NCTC
11218]
gi|315179550|gb|ADT86464.1| histone deacetylase/AcuC/AphA family protein [Vibrio furnissii NCTC
11218]
Length = 306
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 86/175 (49%), Gaps = 12/175 (6%)
Query: 120 FP--NCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADI 177
FP + L++R + GGT L A+LA E G AI++ GG+HH D G GFC Y D+
Sbjct: 86 FPWSDALIERTL-----TSAGGTCLTAQLAVEHGVAIHLSGGYHHAHRDFGSGFCLYNDL 140
Query: 178 SLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP-RDYEARRF 236
L H A + I +V+I+D D H G+G ++ + L +P R E+
Sbjct: 141 VLAAHQALLLDGIDKVLIVDSDVHHGDGTATLCAARDDIITLSFHCDKNFPARKPES--- 197
Query: 237 IDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
D + + E+L + +A + P+L+IY+AG DI + D LG V
Sbjct: 198 -DIDIALSRDAGDEEFLSHFQSVVTMAVNLHRPDLIIYDAGIDIHQDDELGYFHV 251
>gi|111023769|ref|YP_706741.1| acetoin dehydrogenase [Rhodococcus jostii RHA1]
gi|397737303|ref|ZP_10503975.1| acetoin utilization protein acuC [Rhodococcus sp. JVH1]
gi|110823299|gb|ABG98583.1| possible acetoin dehydrogenase [Rhodococcus jostii RHA1]
gi|396926742|gb|EJI93979.1| acetoin utilization protein acuC [Rhodococcus sp. JVH1]
Length = 423
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 125/276 (45%), Gaps = 30/276 (10%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
+++SPDY +S+ HP + ++ S G L+ ++ P AS DLL +H+
Sbjct: 20 VVWSPDY-LSYR-WSADHPMNPTRLELTMSLARSLGILEGVELLRPAAASDADLLRIHTP 77
Query: 97 SYLKSLQS---SPNVSIIIEVPPVAL-------FPNCLVQRKVLYPFRKQVGGTILAAK- 145
+Y+++++ S ++ P L FP +L GG++ AA+
Sbjct: 78 AYVEAVKQAGHSATSGVLGADAPHGLGTEDNPVFPQMHEASAIL------AGGSLAAAQE 131
Query: 146 -LAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
A A+++GGG HH D GFC Y D+++ I + + R+ ID+DAH G+
Sbjct: 132 IAAGRTRRAVSIGGGMHHAMPDWASGFCVYNDVAIAISW-LLDHGFDRIAYIDVDAHHGD 190
Query: 205 GHEKDFSSDSRVYILDMF-NPG-IYPRDYEARRFIDQKVE-------VVSGTTTNEYLKK 255
G + F+ D RV + + +P ++P + + E V+ GT +L+
Sbjct: 191 GVQHAFAHDPRVLTISLHQHPATLWPNTGWSSEVGEGSGEGTAVNLPVLPGTVDALWLRG 250
Query: 256 LDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ A +F P++VI G D DPL L +
Sbjct: 251 FHAVVPGALASFRPQIVISQCGVDSHREDPLADLAL 286
>gi|260767385|ref|ZP_05876323.1| histone deacetylase/AcuC/AphA family protein [Vibrio furnissii CIP
102972]
gi|260617620|gb|EEX42801.1| histone deacetylase/AcuC/AphA family protein [Vibrio furnissii CIP
102972]
Length = 306
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 86/175 (49%), Gaps = 12/175 (6%)
Query: 120 FP--NCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADI 177
FP + L++R + GGT L A+LA E G AI++ GG+HH D G GFC Y D+
Sbjct: 86 FPWSDALIERTL-----TSAGGTCLTAQLAVEHGVAIHLSGGYHHAHRDFGSGFCLYNDL 140
Query: 178 SLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP-RDYEARRF 236
L H A + I +V+I+D D H G+G ++ + L +P R E+
Sbjct: 141 VLAAHQALLLDGIDKVLIVDSDVHHGDGTATLCAARDDIITLSFHCDKNFPARKPES--- 197
Query: 237 IDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
D + + E+L + +A + P+L+IY+AG DI + D LG V
Sbjct: 198 -DIDIALSRDAGDEEFLSHFQSVVTMAVNLHRPDLIIYDAGIDIHQDDELGYFHV 251
>gi|289623985|ref|ZP_06456939.1| histone deacetylase family protein [Pseudomonas syringae pv.
aesculi str. NCPPB 3681]
gi|289648772|ref|ZP_06480115.1| histone deacetylase family protein [Pseudomonas syringae pv.
aesculi str. 2250]
gi|422584154|ref|ZP_16659267.1| histone deacetylase family protein [Pseudomonas syringae pv.
aesculi str. 0893_23]
gi|422605128|ref|ZP_16677143.1| histone deacetylase family protein [Pseudomonas syringae pv. mori
str. 301020]
gi|298156609|gb|EFH97704.1| deacetylase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
gi|330868974|gb|EGH03683.1| histone deacetylase family protein [Pseudomonas syringae pv.
aesculi str. 0893_23]
gi|330888785|gb|EGH21446.1| histone deacetylase family protein [Pseudomonas syringae pv. mori
str. 301020]
Length = 305
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 116/260 (44%), Gaps = 14/260 (5%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LPLIY DY F H F K+ + +L G ++ P + L +
Sbjct: 1 MSLPLIYHEDYSPDF---PADHRFPMDKFRLLRDYLVDSGLTSDVQLMRPELCPADILAL 57
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
H SY+ + ++S + + L +R V + VGG++L A+ A + G
Sbjct: 58 AHDPSYISRYLNG-DLSREDQRRLGLPWSEALARRTV-----RAVGGSLLTAEQALKHGM 111
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
A ++ GG HH D GFC + D+++ Y + +V+I D D HQG+G + +
Sbjct: 112 ACHLAGGTHHAHYDYPAGFCIFNDLAVISQYLLQSGRVDKVLIFDCDVHQGDGTARILAD 171
Query: 213 DSRVYILDMFNPGIYPRDYEARRF-IDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPEL 271
+ + +P AR+ D + + G +YL +D+ L + P+L
Sbjct: 172 TEDAITVSLHCEKNFP----ARKAQSDWDIPLPMGMGDADYLNVVDDLLNYLLPFYKPDL 227
Query: 272 VIYNAGTDILEGDPLGMLKV 291
V+Y+AG D+ + D LG L++
Sbjct: 228 VLYDAGVDVHKDDALGYLQL 247
>gi|433658231|ref|YP_007275610.1| Histone deacetylase [Vibrio parahaemolyticus BB22OP]
gi|432508919|gb|AGB10436.1| Histone deacetylase [Vibrio parahaemolyticus BB22OP]
Length = 302
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 117/264 (44%), Gaps = 25/264 (9%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPLIY P Y S L + + H + K+ + + + + + EP + E + VH
Sbjct: 2 LPLIYHPIY--SKLELPEGHRYPIMKYQYLYEEVRRDVQAEWVQFFEPQALTIEAIKRVH 59
Query: 95 SESYLKSLQSSPNVSIIIEVPPVAL----FP--NCLVQRKVLYPFRKQVGGTILAAKLAK 148
Y+ L +P + FP L+ R + GT+L A+ A
Sbjct: 60 DADYVDLLVQG-------NMPAAKMRRIGFPWSEALITRTL-----TSAAGTLLTAEKAL 107
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEK 208
E G A+++ GG+HH D G GFC + D+ + + ++ +++IID D H G+G
Sbjct: 108 EHGIALHLSGGYHHAHKDFGSGFCLFNDLVIAAKHMLDNEHVDKILIIDSDVHHGDGTAT 167
Query: 209 DFSSDSRVYILDMFNPGIYPRDYEARR-FIDQKVEVVSGTTTNEYLKKLDEALEVAGHTF 267
+ + L +P AR+ D V + GT +L E +E+A +
Sbjct: 168 LCQEEPDIVTLSFHCDKNFP----ARKPQSDLDVPLAKGTDDETFLMTFKEVVEMALNFH 223
Query: 268 DPELVIYNAGTDILEGDPLGMLKV 291
P++VIY+AG DI + D LG V
Sbjct: 224 RPDMVIYDAGVDIHQNDELGYFDV 247
>gi|145355001|ref|XP_001421761.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581999|gb|ABP00055.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 350
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 115/254 (45%), Gaps = 33/254 (12%)
Query: 54 HPFDSSKWGRICQFLSSEGFL-DKNCIVE-PLEASKEDLLVVHSESYLKSLQSSPNVSII 111
H F K+ R + L + L +K ++E P + +LL+ H Y++ + +++
Sbjct: 55 HRFPMDKYARTREALRRDAALVNKITLLESPKVDIESELLLTHCPEYVQRV-----LTLT 109
Query: 112 IEVPPVALFPNCLVQRKVLYPFRKQ--------VGGTILAAK--LAKERGWAINVGGGFH 161
+ V RK+ +P +Q GGT+ + ++ R A + GG H
Sbjct: 110 LREDEV---------RKIGFPMAQQNVERSLASTGGTVACMREVMSGARASA-QIAGGTH 159
Query: 162 HCSADEGGGFCAYADISLCIHYAFVQ----LNISRVMIIDLDAHQGNGHEKDFSSDSRVY 217
H D G GFC + D+++ I+ A + L ++++IDLD HQGNG K F D++V
Sbjct: 160 HAYRDRGEGFCVFNDVAVAINVARREFADSLRDRKILVIDLDVHQGNGTAKIFEGDAQVV 219
Query: 218 ILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAG 277
M YP + R VE+ EYL L++ L +DP +V + AG
Sbjct: 220 TFSMHGEKNYP--IKTREKSTHDVELPDDCEDEEYLSLLEQWLPKLFDDYDPAIVFFQAG 277
Query: 278 TDILEGDPLGMLKV 291
D L+ D G L +
Sbjct: 278 IDALKEDSFGRLAM 291
>gi|326918856|ref|XP_003205702.1| PREDICTED: histone deacetylase 8-like [Meleagris gallopavo]
Length = 364
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 108/234 (46%), Gaps = 17/234 (7%)
Query: 67 FLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQ--SSPNVSIIIEVPPVALFPNCL 124
+ + LD I++P AS E++ H+++YL+ LQ S E L +C
Sbjct: 31 LIEAYSLLDHMMIIKPKVASMEEMASFHTDAYLQHLQKVSEEGDDDHPESVEYGLGYDCP 90
Query: 125 VQRKVLYPFRKQVGG-TILAAK--LAKERGWAINVGGGFHHCSADEGGGFCAYADISLCI 181
+ + + VGG TI AA+ L + AIN GG+HH DE GFC D L I
Sbjct: 91 ATEGI-FDYAAAVGGATITAAQCLLDGKCKVAINWPGGWHHAKKDEASGFCYLNDAVLGI 149
Query: 182 HYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDM--FNPGIYPRDYEAR----- 234
++ R++ IDLD H G+G E FS S+V + + F+PG +P +
Sbjct: 150 --LRLRQKFDRILYIDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVTDVGLG 207
Query: 235 --RFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPL 286
R+ V + G +Y + + L+ F+PE V+ G D + GDP+
Sbjct: 208 KGRYYSVNVPIQDGIQDEKYYQICETVLKEVYAAFNPEAVVLQLGADTIAGDPM 261
>gi|257482169|ref|ZP_05636210.1| histone deacetylase family protein [Pseudomonas syringae pv. tabaci
str. ATCC 11528]
gi|422597283|ref|ZP_16671558.1| histone deacetylase family protein [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|422682025|ref|ZP_16740292.1| histone deacetylase family protein [Pseudomonas syringae pv. tabaci
str. ATCC 11528]
gi|330987575|gb|EGH85678.1| histone deacetylase family protein [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|331011366|gb|EGH91422.1| histone deacetylase family protein [Pseudomonas syringae pv. tabaci
str. ATCC 11528]
Length = 305
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 116/260 (44%), Gaps = 14/260 (5%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LPLIY DY F H F K+ + +L G ++ P + L +
Sbjct: 1 MSLPLIYHEDYSPDF---PADHRFPMDKFRLLRDYLVDSGLTSDVQLMRPELCPADILAL 57
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
H SY+ + ++S + + L +R V + VGG++L A+ A + G
Sbjct: 58 AHDPSYISRYLNG-DLSREDQRRLGLPWSEALARRTV-----RAVGGSLLTAEQALKHGM 111
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
A ++ GG HH D GFC + D+++ Y + +V+I D D HQG+G + +
Sbjct: 112 ACHLAGGTHHAHYDYPAGFCIFNDLAVISQYLLQSGRVDKVLIFDCDVHQGDGTARILAD 171
Query: 213 DSRVYILDMFNPGIYPRDYEARRF-IDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPEL 271
+ + +P AR+ D + + G +YL +D+ L + P+L
Sbjct: 172 TEDAITVSLHCEKNFP----ARKAQSDWDIPLPMGMGDADYLNVVDDLLNYLLPFYKPDL 227
Query: 272 VIYNAGTDILEGDPLGMLKV 291
V+Y+AG D+ + D LG L++
Sbjct: 228 VLYDAGVDVHKDDALGYLQL 247
>gi|91775829|ref|YP_545585.1| histone deacetylase superfamily protein [Methylobacillus
flagellatus KT]
gi|91709816|gb|ABE49744.1| histone deacetylase superfamily [Methylobacillus flagellatus KT]
Length = 307
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 115/270 (42%), Gaps = 31/270 (11%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
L+ PD + + + LHP ++ I L+ LDK E +A+ E LL VH
Sbjct: 5 LVSHPDTLLHVM--DGLHPESPARITAIMDALAEHRLLDKLQRHEAPQATDEALLRVHDA 62
Query: 97 SYLKSLQS-SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAIN 155
+Y+K ++S +P I+ P A+ P L L+ G I A L ++
Sbjct: 63 AYIKHIRSIAPRAGIVRLDPDTAMGPMSL--SACLH----ASGAVIKAVDLVMQK----Q 112
Query: 156 VGGGF-------HHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEK 208
V F HH GFC + I+ + YA + R+ ++D+D H G+G E
Sbjct: 113 VTNAFCCVRPPGHHAGRARAAGFCIFNHIAAGVAYALASYKLKRIAVLDIDVHHGDGTED 172
Query: 209 DFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEV-----VSGTTTNE-YLKKLDEALEV 262
F +D RV + F YP R +D V V G E +L + + AL+
Sbjct: 173 IFRNDPRVMLCSTFQHPFYPHSGADTR-LDHIVNVPLPAESDGAAFREAFLLRFEPALQ- 230
Query: 263 AGHTFDPELVIYNAGTDILEGDPLGMLKVK 292
F P++V +AG D DPL L +K
Sbjct: 231 ---RFQPQMVFISAGFDAHANDPLAQLMLK 257
>gi|326674312|ref|XP_001920667.3| PREDICTED: uncharacterized protein SYNPCC7002_A1628-like [Danio
rerio]
Length = 283
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 86/172 (50%), Gaps = 9/172 (5%)
Query: 121 PNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLC 180
P LVQR R + GGT+LA ++A +RG A + GG HH G GFC D+++
Sbjct: 62 PPGLVQR-----CRYETGGTLLAGQIALQRGLACSTAGGTHHAFPSHGSGFCLLNDLAVT 116
Query: 181 IHYAFVQLNISR-VMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQ 239
+ + R ++I+DLD HQG+G F + V+ + +P + D
Sbjct: 117 AKHLISEPTPKRKILIVDLDVHQGDGTAFIFKDEPSVFTFSVHCQRNFPLRKQQS---DL 173
Query: 240 KVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
V + GT EYL ++ E L +F P+LV+Y++G D D LG L++
Sbjct: 174 DVSLEDGTEDREYLSRVQEHLPWLLESFRPDLVLYDSGVDPHWDDELGKLRL 225
>gi|302188367|ref|ZP_07265040.1| histone deacetylase superfamily protein [Pseudomonas syringae pv.
syringae 642]
Length = 305
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 116/260 (44%), Gaps = 14/260 (5%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LPLIY DY F H F K+ + +L G ++ P + L +
Sbjct: 1 MSLPLIYHEDYSPEF---PADHRFPMDKFRLLRDYLIDSGLTSDVQLMRPELCPADILAL 57
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
H SY++ ++S + + L +R + + VGG++L A+ A + G
Sbjct: 58 AHDPSYIRRYLDG-DLSREDQRRLGLPWSEALARRTI-----RAVGGSLLTAEQALKHGL 111
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
A ++ GG HH D GFC + D+++ Y + +V+I D D HQG+G + +
Sbjct: 112 ACHLAGGTHHAHYDYPAGFCIFNDLAVISQYLLHSGRVDKVLIFDCDVHQGDGTARILAD 171
Query: 213 DSRVYILDMFNPGIYPRDYEARRF-IDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPEL 271
+ + +P AR+ D + + G +YL +D+ L + P+L
Sbjct: 172 TEDAITVSLHCEKNFP----ARKAQSDWDIPLPMGMGDADYLNVVDDLLNYLLPLYKPDL 227
Query: 272 VIYNAGTDILEGDPLGMLKV 291
V+Y+AG D+ + D LG L++
Sbjct: 228 VLYDAGVDVHKDDALGYLQL 247
>gi|431928586|ref|YP_007241620.1| deacetylase [Pseudomonas stutzeri RCH2]
gi|431826873|gb|AGA87990.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas stutzeri RCH2]
Length = 306
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 110/259 (42%), Gaps = 12/259 (4%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LPL++ DY + H F K+ + L + G ++ P + L +
Sbjct: 1 MSLPLVFHDDYSPP---LPPGHRFPMEKFRLLRDHLVALGLTTDATLLRPELCGHDILAL 57
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
H Y+ S + + P L QR V + VGG++LAA+ A + G
Sbjct: 58 AHDPDYVARYCSGEMGRDELRRLGLPWSPE-LAQRTV-----RAVGGSLLAAEQALQHGL 111
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
A ++ GG HH D GFC + D+++ Y + RV+I D D HQG+G + +
Sbjct: 112 ACHLAGGTHHAHRDHASGFCIFNDLAVIALYLLESGRVGRVLIFDCDVHQGDGTARILEN 171
Query: 213 DSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELV 272
+ + +P + D + + G YLK + + L + P+LV
Sbjct: 172 IPDAVTVSLHCEKNFP---TRKAHSDWDIPLPPGMGDEAYLKVVHDTLNYLLPIYQPDLV 228
Query: 273 IYNAGTDILEGDPLGMLKV 291
+Y+AG D+ D LG+L +
Sbjct: 229 LYDAGVDVHRDDALGLLSL 247
>gi|392551183|ref|ZP_10298320.1| histone deacetylase superfamily protein [Pseudoalteromonas spongiae
UST010723-006]
Length = 298
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 118/265 (44%), Gaps = 29/265 (10%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
+P+ Y P Y S L + H F K+ + QF+ E ++ + P +AS +D+ VH
Sbjct: 3 IPIFYHPSY--SSLSLPDNHRFPIEKYQLLYQFIKQE-LAEQFRFITPEKASLDDISKVH 59
Query: 95 SESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQ--------VGGTILAAKL 146
+++ + + P A+ RK+ +P+ Q +G +I AKL
Sbjct: 60 CPIFVQQF-------VTGTLEPKAI-------RKMGFPWSPQLVERTLYSIGASIQGAKL 105
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
A E A + GG+HH + G GFC + D+ + + +S+V+I+DLD HQG+G
Sbjct: 106 ALETHIASQISGGYHHSFPNFGSGFCIFNDLVIAARHLLDNNLVSKVVILDLDVHQGDGS 165
Query: 207 EKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHT 266
+ + + + +P ++ D + EY L + L +
Sbjct: 166 AVCAQAMDDIITISLHCEQNFP---AKKQHSDYDFTLNKHANDQEYQTMLQQCL-LTLLV 221
Query: 267 FDPELVIYNAGTDILEGDPLGMLKV 291
P++V+YNAG DI GD LG V
Sbjct: 222 EQPDIVLYNAGADIYSGDELGYFNV 246
>gi|338530821|ref|YP_004664155.1| histone deacetylase family protein [Myxococcus fulvus HW-1]
gi|337256917|gb|AEI63077.1| histone deacetylase family protein [Myxococcus fulvus HW-1]
Length = 586
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 112/259 (43%), Gaps = 24/259 (9%)
Query: 35 LPLIYSPDYDISFLGIEK---LHP--FDSSKWGRICQFLSSEGFLDKNCIVEPLEASKED 89
+P Y Y + GIE + P D + W +L L + P S +
Sbjct: 17 VPAFYDESYRLPLTGIESSVGIEPRGVDFTTW-----YLLEARALRAQDVHHPQPVSLAE 71
Query: 90 LLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
L VH +YL+SL ++ I P + + L L R+ GGT+ AA+LA
Sbjct: 72 LTRVHDAAYLESLGQPETLARIFATDPADVPVDAL-----LSNLRRVCGGTLGAARLAVA 126
Query: 150 R-GWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEK 208
R G +N+ GGFHH + GGGFCA DI++ + + +++DLDAH +G +
Sbjct: 127 RKGPVVNMAGGFHHAAPARGGGFCAVNDIAVALAALHADGFDGQAVVLDLDAHPPDGTAE 186
Query: 209 DFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFD 268
+ R ++ + D+ A + V GT YL LD LE
Sbjct: 187 CLAGQKRAWLGSLSGC-----DWGALAPEMDETCVPEGTDDRTYLALLDALLE---RMPR 238
Query: 269 PELVIYNAGTDILEGDPLG 287
P++ AG+D+L GD G
Sbjct: 239 PDVAFVIAGSDVLAGDRFG 257
>gi|389876264|ref|YP_006369829.1| histone deacetylase [Tistrella mobilis KA081020-065]
gi|388527048|gb|AFK52245.1| histone deacetylase [Tistrella mobilis KA081020-065]
Length = 300
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 104/241 (43%), Gaps = 15/241 (6%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQS---SPNVSI 110
H F K+ + L F D+ V P A L H+ Y+ + + P
Sbjct: 14 HRFPIGKFAALKAHLDRGPFADRFRHVVPEPADAALLERAHTPDYVADVLACRLDPTAIR 73
Query: 111 IIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGG 170
I VP V V+ VGGT+ A + A +RG A N GG HH A G G
Sbjct: 74 RIGVP---------VTPPVVMRATASVGGTVAAVEAALDRGIASNTAGGSHHAHAGFGAG 124
Query: 171 FCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRD 230
FC + D+++ +A RV+IIDLD HQG+G + M +P
Sbjct: 125 FCVFNDVAVAACHAHATGRAGRVVIIDLDVHQGDGTARILEDQPWAVTFSMHGARNFPV- 183
Query: 231 YEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLK 290
+AR ID +E+ GT YL +L++AL P+LVIY AG D D LG L
Sbjct: 184 RKARSTID--IELPDGTGDAAYLDQLEDALPGLLDAPRPDLVIYLAGVDPHRDDRLGRLA 241
Query: 291 V 291
+
Sbjct: 242 L 242
>gi|226355849|ref|YP_002785589.1| histone deacetylase superfamily protein [Deinococcus deserti
VCD115]
gi|226317839|gb|ACO45835.1| putative Histone deacetylase superfamily [Deinococcus deserti
VCD115]
Length = 312
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 76/154 (49%), Gaps = 3/154 (1%)
Query: 138 GGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIID 197
G T+ A + A +RG IN+GGG HH AD GF D+ + + R++++D
Sbjct: 101 GATLAATRDALQRGLGINLGGGTHHAFADRAEGFSFLNDVVISARWLLDAGYARRILVLD 160
Query: 198 LDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLD 257
LD HQGNG ++ RV + + YP E R +D V + GT YL+ L+
Sbjct: 161 LDVHQGNGTASMLRAEPRVLTVSVHAQSNYPFRKE-RSGLD--VGLPDGTGDQAYLQALE 217
Query: 258 EALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ F P+ + Y AG D+L GD LG L +
Sbjct: 218 TQVAPVVTAFRPDFLFYLAGADVLAGDQLGRLAL 251
>gi|424069461|ref|ZP_17806907.1| histone deacetylase [Pseudomonas syringae pv. avellanae str.
ISPaVe013]
gi|407994543|gb|EKG35114.1| histone deacetylase [Pseudomonas syringae pv. avellanae str.
ISPaVe013]
Length = 305
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 115/260 (44%), Gaps = 14/260 (5%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LPLIY DY F H F K+ + +L G ++ P + L +
Sbjct: 1 MSLPLIYHEDYSPDF---PADHRFPMDKFRLLRDYLIDSGLTSDVQLMRPELCPADILAL 57
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
H SY+ S ++S + + L +R + + VGG++L A+ A G
Sbjct: 58 AHDPSYISRYLSG-DLSREDQRRLGLPWSEALARRTI-----RAVGGSLLTAEQALTHGL 111
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
A ++ GG HH D GFC + D+++ Y + +V+I D D HQG+G + +
Sbjct: 112 ACHLAGGTHHAHYDYPAGFCIFNDLAVISQYLLQSGRVDKVLIFDCDVHQGDGTARILAD 171
Query: 213 DSRVYILDMFNPGIYPRDYEARRF-IDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPEL 271
+ + +P AR+ D + + G +YL +D+ L + P+L
Sbjct: 172 TEDAITVSLHCEKNFP----ARKAQSDWDIPLPMGMGDADYLNVVDDLLNYLLPFYKPDL 227
Query: 272 VIYNAGTDILEGDPLGMLKV 291
V+Y+AG D+ + D LG L++
Sbjct: 228 VLYDAGVDVHKDDALGYLQL 247
>gi|323493174|ref|ZP_08098305.1| histone deacetylase/AcuC/AphA family protein [Vibrio brasiliensis
LMG 20546]
gi|323312645|gb|EGA65778.1| histone deacetylase/AcuC/AphA family protein [Vibrio brasiliensis
LMG 20546]
Length = 307
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 104/221 (47%), Gaps = 27/221 (12%)
Query: 80 VEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV-- 137
VEP +K +L +H Y++SL S +P V + R++ +P+ +++
Sbjct: 50 VEPEPVNKAELSQIHCGEYIESLISGA-------LPAVKM-------RRIGFPWSQELIN 95
Query: 138 ------GGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNIS 191
GGT + + E G AI++ GG+HH D G GFC D+ + +
Sbjct: 96 RTLMSAGGTCETVRQSIEHGIAIHLSGGYHHAHFDFGSGFCLINDLVIAAKRGLTIEGVD 155
Query: 192 RVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARR-FIDQKVEVVSGTTTN 250
+++I+D D H G+G +SD ++ L +P AR+ D V + T
Sbjct: 156 KILIVDSDVHHGDGTATLCASDEQIVTLSFHCDKNFP----ARKPDSDLDVPLTRDTGDE 211
Query: 251 EYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
E+L +E+A + P++++Y+AG DI + D LG L V
Sbjct: 212 EFLATFTSVVEMAINLHQPDVIVYDAGVDIHQDDELGYLNV 252
>gi|147901604|ref|NP_001085711.1| histone deacetylase 8 [Xenopus laevis]
gi|82184398|sp|Q6GPA7.1|HDAC8_XENLA RecName: Full=Histone deacetylase 8; Short=HD8
gi|49119229|gb|AAH73234.1| MGC80565 protein [Xenopus laevis]
Length = 325
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 104/222 (46%), Gaps = 17/222 (7%)
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQ--SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQ 136
+V+P AS E++ H+++YL+ L S + E L +C + + Y +
Sbjct: 4 VVKPKVASMEEMAAFHTDAYLQHLHKVSEEGDNDDPETLEYGLGYDCPITEGI-YDYAAA 62
Query: 137 VGGTILAAK---LAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRV 193
VGG L A + + A+N GG+HH DE GFC D L I ++ RV
Sbjct: 63 VGGATLTAAEQLIEGKTRIAVNWPGGWHHAKKDEASGFCYLNDAVLGI--LKLREKFDRV 120
Query: 194 MIIDLDAHQGNGHEKDFSSDSRVYILDM--FNPGIYPRDYEAR-------RFIDQKVEVV 244
+ +D+D H G+G E FS S+V + + F+PG +P + R+ V +
Sbjct: 121 LYVDMDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDIGLGKGRYYSINVPLQ 180
Query: 245 SGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPL 286
G ++Y + + L+ TF+PE V+ G D + GDP+
Sbjct: 181 DGIQDDKYYQICEGVLKEVFTTFNPEAVVLQLGADTIAGDPM 222
>gi|32477270|ref|NP_870264.1| histone deacetylase [Rhodopirellula baltica SH 1]
gi|417302473|ref|ZP_12089573.1| histone deacetylase/AcuC/AphA family protein [Rhodopirellula
baltica WH47]
gi|32447821|emb|CAD77339.1| conserved hypothetical protein-putative histone deacetylase
[Rhodopirellula baltica SH 1]
gi|327541213|gb|EGF27757.1| histone deacetylase/AcuC/AphA family protein [Rhodopirellula
baltica WH47]
Length = 305
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 123/266 (46%), Gaps = 26/266 (9%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQ-FLSSEGFLDKNCIVEPLEASKEDLLVV 93
+ L Y+ +D L + + H F SK+ + Q + SE D IV P A+ E LL
Sbjct: 1 MRLYYTDHFD---LPLPEGHRFPMSKYRLLRQRVVESEHHRDDTLIV-PQAATDEQLLHC 56
Query: 94 HSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWA 153
H+ Y++ +QS E+ + FP K++ R+ G TI AA+ A + G +
Sbjct: 57 HTPDYVQRVQSGTLTKQ--EIRRIG-FP---WSAKMVERSRRSTGATISAARAALDEGIS 110
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSD 213
N+ GG HH A EG G+C + D ++ I + I R IIDLD HQGNG
Sbjct: 111 ANLAGGTHHAFAGEGEGYCVFNDAAVAIRTLQSEGLIQRAAIIDLDVHQGNGTASILKDV 170
Query: 214 SRVYILDMFNPGIYPRDYEARRF-IDQKVEVVSGTTTNEY-------LKKLDEALEVAGH 265
V+ + +P R+ D V + GT ++Y L KL++ +G
Sbjct: 171 PSVFTCSVHGVKNFP----LRKMPSDLDVSLPDGTGDDDYCDALRSVLAKLEKHQSESGQ 226
Query: 266 TFDPELVIYNAGTDILEGDPLGMLKV 291
FD LVIY AG D + D LG L +
Sbjct: 227 -FD--LVIYLAGADPYKNDRLGRLSL 249
>gi|422629205|ref|ZP_16694410.1| histone deacetylase superfamily protein [Pseudomonas syringae pv.
pisi str. 1704B]
gi|330938165|gb|EGH41867.1| histone deacetylase superfamily protein [Pseudomonas syringae pv.
pisi str. 1704B]
Length = 305
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 116/260 (44%), Gaps = 14/260 (5%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LPLIY DY F H F K+ + +L G ++ P + L +
Sbjct: 1 MSLPLIYHEDYSPDF---PADHRFPMDKFRLLRDYLIDSGLTSDVQLMRPELCPADILAL 57
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
H SY+ S ++S + + L +R + + VGG++L A+ A + G
Sbjct: 58 AHDPSYISRYLSG-DLSREDQRRLGLPWSEALARRTI-----RAVGGSLLTAEQALKHGL 111
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
A ++ GG HH D GFC + D+++ Y + +V+I D D HQG+G + +
Sbjct: 112 ACHLAGGTHHAHYDYPAGFCIFNDLAVISQYLLQSGRVDKVLIFDCDVHQGDGTARILAD 171
Query: 213 DSRVYILDMFNPGIYPRDYEARRF-IDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPEL 271
+ + +P AR+ D + + G +YL +D+ L + P+L
Sbjct: 172 TEDAITVSLHCEKNFP----ARKAQSDWDIPLPIGMGDVDYLNVVDDLLNYLLPFYKPDL 227
Query: 272 VIYNAGTDILEGDPLGMLKV 291
V+Y+AG D+ + D LG L++
Sbjct: 228 VLYDAGVDVHKDDALGYLQL 247
>gi|85712658|ref|ZP_01043704.1| Histone deacetylase/AcuC/AphA family protein [Idiomarina baltica
OS145]
gi|85693508|gb|EAQ31460.1| Histone deacetylase/AcuC/AphA family protein [Idiomarina baltica
OS145]
Length = 302
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 113/267 (42%), Gaps = 28/267 (10%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
K+P IY P Y S L + + H + K+ + Q+ + G + ++P + + +
Sbjct: 1 MKVPFIYHPIY--SELQLPERHRYPIHKYKMLYQWALAHG-ARPDQFIQPTPMNWSQVAL 57
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTILAA 144
HS +Y+ L ++ + RKV +P+ Q+ GGT
Sbjct: 58 AHSSNYINKLITNQF--------------DKKEWRKVGFPWSTQLLTRTLTSAGGTFETV 103
Query: 145 KLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
K A ++ AI+ GG+HH D G GFC D+++ A +++I D D HQG+
Sbjct: 104 KTALDKRIAIHFSGGYHHAHHDWGSGFCLINDLAMSAVLATKAKPNLKILIFDTDVHQGD 163
Query: 205 GHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAG 264
G ++ + +P + D V + GTT YL + L
Sbjct: 164 GTATLLRDHENIFTCSIHGERNFPF---TKVDSDLDVALPKGTTDGAYLDAVKHTLHKVT 220
Query: 265 HTFDPELVIYNAGTDILEGDPLGMLKV 291
F P+L++Y+AG DI D LG L V
Sbjct: 221 KDFKPDLILYDAGVDIYRRDDLGHLDV 247
>gi|384100774|ref|ZP_10001831.1| acetoin dehydrogenase [Rhodococcus imtechensis RKJ300]
gi|419965925|ref|ZP_14481860.1| acetoin dehydrogenase [Rhodococcus opacus M213]
gi|432340393|ref|ZP_19589835.1| acetoin dehydrogenase [Rhodococcus wratislaviensis IFP 2016]
gi|383841680|gb|EID80957.1| acetoin dehydrogenase [Rhodococcus imtechensis RKJ300]
gi|414568599|gb|EKT79357.1| acetoin dehydrogenase [Rhodococcus opacus M213]
gi|430774586|gb|ELB90172.1| acetoin dehydrogenase [Rhodococcus wratislaviensis IFP 2016]
Length = 423
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 125/276 (45%), Gaps = 30/276 (10%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
+++SPDY +S+ HP + ++ S G L+ ++ P AS DLL +H+
Sbjct: 20 VVWSPDY-LSYR-WSADHPMNPTRLELTMSLARSLGILEGVELLRPDAASDADLLRIHTP 77
Query: 97 SYLKSLQS---SPNVSIIIEVPPVAL-------FPNCLVQRKVLYPFRKQVGGTILAAK- 145
+Y+++++ S ++ P L FP +L GG++ AA+
Sbjct: 78 AYVEAVKQAGHSATSGVLGADAPHGLGTEDNPVFPQMHEASAIL------AGGSLAAAQE 131
Query: 146 -LAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
A A+++GGG HH D GFC Y D+++ I + + R+ ID+DAH G+
Sbjct: 132 IAAGRTRRAVSIGGGMHHAMPDWASGFCVYNDVAIAISW-LLDHGFDRIAYIDVDAHHGD 190
Query: 205 GHEKDFSSDSRVYILDMF-NPG-IYPRDYEARRFIDQKVE-------VVSGTTTNEYLKK 255
G + F+ D RV + + +P ++P + + E V+ GT +L+
Sbjct: 191 GVQHAFAHDPRVLTISLHQHPATLWPNTGWSSEVGEGSGEGTAVNLPVLPGTVDALWLRG 250
Query: 256 LDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ A +F P++VI G D DPL L +
Sbjct: 251 FHAVVPGALASFRPQIVISQCGVDSHREDPLADLAL 286
>gi|424852222|ref|ZP_18276619.1| acetoin dehydrogenase [Rhodococcus opacus PD630]
gi|356666887|gb|EHI46958.1| acetoin dehydrogenase [Rhodococcus opacus PD630]
Length = 410
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 125/276 (45%), Gaps = 30/276 (10%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
+++SPDY +S+ HP + ++ S G L+ ++ P AS DLL +H+
Sbjct: 7 VVWSPDY-LSYR-WSADHPMNPTRLELTMSLARSLGILEGVELLRPDAASDADLLRIHTP 64
Query: 97 SYLKSLQS---SPNVSIIIEVPPVAL-------FPNCLVQRKVLYPFRKQVGGTILAAK- 145
+Y+++++ S ++ P L FP +L GG++ AA+
Sbjct: 65 AYVEAVKQAGHSATSGVLGADAPHGLGTEDNPVFPQMHEASAIL------AGGSLAAAQE 118
Query: 146 -LAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
A A+++GGG HH D GFC Y D+++ I + + R+ ID+DAH G+
Sbjct: 119 IAAGRTRRAVSIGGGMHHAMPDWASGFCVYNDVAIAISW-LLDHGFDRIAYIDVDAHHGD 177
Query: 205 GHEKDFSSDSRVYILDMF-NPG-IYPRDYEARRFIDQKVE-------VVSGTTTNEYLKK 255
G + F+ D RV + + +P ++P + + E V+ GT +L+
Sbjct: 178 GVQHAFAHDPRVLTISLHQHPATLWPNTGWSSEVGEGSGEGTAVNLPVLPGTVDALWLRG 237
Query: 256 LDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ A +F P++VI G D DPL L +
Sbjct: 238 FHAVVPGALASFRPQIVISQCGVDSHREDPLADLAL 273
>gi|294011535|ref|YP_003544995.1| histone deacetylase family protein [Sphingobium japonicum UT26S]
gi|292674865|dbj|BAI96383.1| histone deacetylase family protein [Sphingobium japonicum UT26S]
Length = 321
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 109/244 (44%), Gaps = 27/244 (11%)
Query: 56 FDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVP 115
F K+G + + L+ + EP + + VH Y++ + + VP
Sbjct: 40 FRFDKYGLVMEALTMAAA--PFTVHEPAPMPRAWIEAVHDPDYVEQVATQ-------TVP 90
Query: 116 PVALFPNCLVQRKVLYPFRKQV--------GGTILAAKLAKERGWAINVGGGFHHCSADE 167
P +R++ +P +V GGT LAA+LA G+A N GG HH
Sbjct: 91 PEK-------ERRIGFPVTARVARRSMLSPGGTWLAARLAMRHGYAANAAGGSHHALPGS 143
Query: 168 GGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIY 227
G G+C + D+++ + + + R++I+DLD HQG+G ++ L + +
Sbjct: 144 GAGYCVFNDLAIAANRLIAEGDARRILILDLDVHQGDGTAVLTGGRGDIFTLSIHADRNF 203
Query: 228 PRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLG 287
P +AR +D + + GT Y+ L + + F P+L++Y AG D E D LG
Sbjct: 204 PV-RKARSTLD--IGLPDGTGDEAYMDALMKVMPPVLDDFRPDLILYQAGVDPHEEDRLG 260
Query: 288 MLKV 291
L +
Sbjct: 261 RLAL 264
>gi|241563574|ref|XP_002401662.1| histone deacetylase complex, catalytic component HDA1, putative
[Ixodes scapularis]
gi|215499888|gb|EEC09382.1| histone deacetylase complex, catalytic component HDA1, putative
[Ixodes scapularis]
Length = 413
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 102/237 (43%), Gaps = 19/237 (8%)
Query: 72 GFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPN------VSIIIEVPPVALFPNCLV 125
G L I+ P +A++ DLL HSE Y+ L++ + I+ + L +C +
Sbjct: 79 GLLKSLYIIRPPQATRNDLLTFHSEDYVDFLETCESAKDLETTDILDKAIEYNLMDDCPL 138
Query: 126 QRKVLYPFRKQVGGTILAAKLAKERGW--AINVGGGFHHCSADEGGGFCAYADISLCIHY 183
++ + GGT+ AA+ E AI+ GG+HH E GFC D+ L I
Sbjct: 139 TDRIFTLVKHIAGGTLSAARALTEGQCDVAIHWEGGWHHAQRSEAAGFCYVNDVVLGI-- 196
Query: 184 AFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDM--FNPGIYPRDYEAR------- 234
++ RV+ +DLD H G+G + F +V + + P YP + +
Sbjct: 197 LQLRRRFERVLYVDLDVHHGDGVQDAFCGTDKVATVSFHQYEPCFYPGTGDCKDVGIGRG 256
Query: 235 RFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
R V + SG ++ + L +DP V+ G D L GDPLG +
Sbjct: 257 RGYSVNVPLRSGMRDPTFVSVVTTVLAEVQRRYDPVAVVCQCGADCLSGDPLGAFNL 313
>gi|37679340|ref|NP_933949.1| histone deacetylase/AcuC/AphA family protein [Vibrio vulnificus
YJ016]
gi|37198083|dbj|BAC93920.1| histone deacetylase/AcuC/AphA family protein [Vibrio vulnificus
YJ016]
Length = 312
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 119/274 (43%), Gaps = 34/274 (12%)
Query: 32 IFKLPLIYSPDYDISFLGIEKLHPFDSSKWGR----ICQFLSSE-GFLDKNCIVEPLEAS 86
+ +PLIY P Y S L + + H + K+ +C++ + +P S
Sbjct: 1 MMSIPLIYHPIY--SRLPLPEGHRYPIMKYHHLYQAVCRYQQQHLEWQQAFAFYQPEALS 58
Query: 87 KEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------G 138
E + VH + Y+ L + L P + R++ +P+ +Q+
Sbjct: 59 IEAIKQVHQQEYVDLLTT-------------GLLPAAKM-RRIGFPWSEQLIERTLTSTA 104
Query: 139 GTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDL 198
GT+L A+ A + G AI++ GG+HH D G GFC + D+ + H A ++ +V+IID
Sbjct: 105 GTVLTAEKALQHGVAIHLSGGYHHAHFDYGSGFCLFNDLVMAAHKALEHASVDKVLIIDS 164
Query: 199 DAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARR-FIDQKVEVVSGTTTNEYLKKLD 257
D H G+G + L +P AR+ D + + +L
Sbjct: 165 DVHHGDGTATLCQRRDDIVTLSFHCDKNFP----ARKPDSDLDIGLPRECGDEAFLAAFK 220
Query: 258 EALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
E + +A P+L+IY+AG DI D LG L V
Sbjct: 221 EVVPMAIRLHQPDLIIYDAGVDIHHEDELGYLNV 254
>gi|421610754|ref|ZP_16051920.1| histone deacetylase/AcuC/AphA family protein [Rhodopirellula
baltica SH28]
gi|408498538|gb|EKK03031.1| histone deacetylase/AcuC/AphA family protein [Rhodopirellula
baltica SH28]
Length = 305
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 123/266 (46%), Gaps = 26/266 (9%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQ-FLSSEGFLDKNCIVEPLEASKEDLLVV 93
+ L Y+ +D L + + H F SK+ + Q + SE D IV P A+ E LL
Sbjct: 1 MRLYYTDHFD---LPLPEGHRFPMSKYRLLRQRVVESEHHRDDTLIV-PQAATDEQLLHC 56
Query: 94 HSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWA 153
H+ Y++ +QS E+ + FP K++ R+ G TI AA+ A + G +
Sbjct: 57 HTPDYVQRVQSGTLTKQ--EIRRIG-FP---WSAKMVERSRRSTGATISAARAAIDEGIS 110
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSD 213
N+ GG HH A EG G+C + D ++ I + I R IIDLD HQGNG
Sbjct: 111 ANLAGGTHHAFAGEGEGYCVFNDAAVAIRTLQSEGLIQRAAIIDLDVHQGNGTASILKDV 170
Query: 214 SRVYILDMFNPGIYPRDYEARRF-IDQKVEVVSGTTTNEY-------LKKLDEALEVAGH 265
V+ + +P R+ D + + GT ++Y L KL++ +G
Sbjct: 171 PSVFTCSVHGVKNFP----LRKMPSDLDISLPDGTGDDDYCDALRSVLAKLEKHQSESGQ 226
Query: 266 TFDPELVIYNAGTDILEGDPLGMLKV 291
FD LVIY AG D + D LG L +
Sbjct: 227 -FD--LVIYLAGADPYKNDRLGRLSL 249
>gi|226366205|ref|YP_002783988.1| acetoin utilization protein [Rhodococcus opacus B4]
gi|226244695|dbj|BAH55043.1| putative acetoin utilization protein [Rhodococcus opacus B4]
Length = 423
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 127/279 (45%), Gaps = 34/279 (12%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
+++SPDY +S+ HP + ++ S G L+ ++ P AS DLL +H+
Sbjct: 20 VVWSPDY-LSYR-WSADHPMNPTRLELTMSLARSLGTLEGVELLRPAAASDADLLRIHTP 77
Query: 97 SYLKSLQ----SSPNVSIIIEVP--------PVALFPNCLVQRKVLYPFRKQVGGTILAA 144
+Y+++++ S+ + + E P PV FP +L GG++ AA
Sbjct: 78 AYVEAVKQAGHSTTSGVLGAEAPHGLGTEDNPV--FPQMHEASAIL------AGGSLAAA 129
Query: 145 K--LAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQ 202
+ A A+++GGG HH D GFC Y D+++ + + + R+ ID+DAH
Sbjct: 130 QEIAAGRTRRAVSIGGGMHHAMPDWASGFCVYNDVAIAVSW-LLDNGFDRIAYIDVDAHH 188
Query: 203 GNGHEKDFSSDSRVYILDMF-NPG-IYPRDYEARRFIDQKVE-------VVSGTTTNEYL 253
G+G + F+ D RV + + +P ++P + + E V+ GT +L
Sbjct: 189 GDGVQHAFAHDPRVLTISLHQHPATLWPNTGWSSEVGEGSGEGTAINLPVLPGTVDALWL 248
Query: 254 KKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKVK 292
+ + A F P++VI G D DPL L +
Sbjct: 249 RGFHAVVPGALAAFRPQIVISQCGVDSHREDPLADLALT 287
>gi|451975732|ref|ZP_21926914.1| histone deacetylase family, putative [Vibrio alginolyticus E0666]
gi|451930317|gb|EMD78029.1| histone deacetylase family, putative [Vibrio alginolyticus E0666]
Length = 307
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 121/270 (44%), Gaps = 33/270 (12%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWG----RICQFLSSEGFLDKNCIVEPLEASKEDL 90
LP IY P Y S L + + H + K+ I + + + + +P + E++
Sbjct: 2 LPFIYHPVY--SQLELPEGHRYPIMKYQYLYESILVHMEKDDWKEHVQFFQPEALTVEEV 59
Query: 91 LVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTIL 142
VH + Y+ L + +P + R++ +P+ + + GT L
Sbjct: 60 KRVHDQKYVDLLVNG-------NMPAAKM-------RRIGFPWSESLITRTLTSAAGTAL 105
Query: 143 AAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQ 202
A A E G AI++ GG+HH + G GFC + D+ + A ++ +V+IID D H
Sbjct: 106 TANKALEYGVAIHLSGGYHHAHKEFGSGFCLFNDLVIAARQALEVEHVDKVLIIDSDVHH 165
Query: 203 GNGHEKDFSSDSRVYILDMFNPGIYPRDYEARR-FIDQKVEVVSGTTTNEYLKKLDEALE 261
G+G + + L +P AR+ D V +V GT ++L E +E
Sbjct: 166 GDGTATLCDDEPDIITLSFHCDKNFP----ARKPQSDLDVPLVRGTGDEDFLMAFKEVVE 221
Query: 262 VAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+A + P+LVIY+AG DI + D LG V
Sbjct: 222 MAINLHRPDLVIYDAGVDIHQDDELGYFDV 251
>gi|359446646|ref|ZP_09236297.1| hypothetical protein P20439_2635 [Pseudoalteromonas sp. BSi20439]
gi|358039452|dbj|GAA72546.1| hypothetical protein P20439_2635 [Pseudoalteromonas sp. BSi20439]
Length = 267
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 101/217 (46%), Gaps = 13/217 (5%)
Query: 80 VEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNC--LVQRKVLYPFRKQV 137
+ P A+ L + HS Y+ N S+ + FP+ LV+R LY V
Sbjct: 13 ISPSPATTAQLSLCHSSDYIADF---LNGSLTDKAVKKMGFPHSPELVER-TLYS----V 64
Query: 138 GGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIID 197
G +I AA+ A + G A N+ GG+HH ++ G GFC + D+++ + V+I D
Sbjct: 65 GASIQAAESAIKSGLAANLSGGYHHAYSNYGSGFCIFNDLAIAAAHLIATEQADTVLIFD 124
Query: 198 LDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLD 257
D HQG+G + ++ + +PR + + + + T EYL L+
Sbjct: 125 CDVHQGDGTAQITQHHEQIISCSIHCEQNFPRQKQHSNY---DFALPANTIDAEYLTTLE 181
Query: 258 EALEVAGHTFDPELVIYNAGTDILEGDPLGMLKVKWG 294
+ALE+ P++++YNAG DI D LG+ V
Sbjct: 182 QALELCVRLHQPDIILYNAGADIYTKDELGLFDVSLA 218
>gi|149374318|ref|ZP_01892092.1| Deacetylase [Marinobacter algicola DG893]
gi|149361021|gb|EDM49471.1| Deacetylase [Marinobacter algicola DG893]
Length = 293
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 104/243 (42%), Gaps = 9/243 (3%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQ-SSPNVSIII 112
HP + I +L+ G V P EA+++ L VH E YL L P +
Sbjct: 5 HPECPERLAAITSYLADTGLGQHLDWVRPDEATRDQLQTVHPERYLNQLDLMQPTRGRVY 64
Query: 113 EVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFC 172
P A+ P+ L ++ + +L+++L A G HH + GFC
Sbjct: 65 TDPDTAMMPDTLRAARLAAGANIEAVDMVLSSQLTNAFVCARPPG---HHAERSKSMGFC 121
Query: 173 AYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDY- 231
Y +I+L A + RV IID D HQGNG D R+ + F YP +
Sbjct: 122 FYNNIALAAMRALNFHQLERVAIIDFDVHQGNGTVDIVGGDERILMCSSFQHPFYPHSHV 181
Query: 232 --EARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGML 289
+A I+ ++ +GT EY K ++ A F P+LV+ +AG D DP+ L
Sbjct: 182 HRQAENIINTPIQ--AGTPAAEYRKIVEAAWLKRLQDFRPQLVLVSAGFDGHRLDPMAEL 239
Query: 290 KVK 292
++
Sbjct: 240 NLE 242
>gi|342306691|dbj|BAK54780.1| protein deacetylase [Sulfolobus tokodaii str. 7]
Length = 350
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 114/248 (45%), Gaps = 18/248 (7%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQ-SSPNVSIII 112
HPF S + + L G + IV P S+E L ++H++ Y++ ++ S S ++
Sbjct: 21 HPFKSLREAMTKKLLEERGAFHEIDIVPPKVISEELLSLIHTKEYIEFIKRKSEEGSGLL 80
Query: 113 EVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFC 172
+ F + +V GT+ A +L + IN+GGGFHH + GFC
Sbjct: 81 DEGDTPAFKGIFEAALI------RVSGTVTAVELLQSYDHTINIGGGFHHAKRSQASGFC 134
Query: 173 AYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVY--ILDMFNPGIYP-- 228
+ D++L I A + + ++ ++D+D H G+G + D +V L MF+P +P
Sbjct: 135 VFNDVALAIKLA--ERSFKKIALVDIDGHHGDGTQYLLYDDPKVLKVSLHMFHPRFFPGT 192
Query: 229 -RDYE----ARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEG 283
+YE + + + + GT + YL +E + F P+L+ G D
Sbjct: 193 GDEYEIGSGEGKGMTINIPLPPGTGDDMYLYAFNEIVVPKIKEFKPDLIFLLNGGDSYYE 252
Query: 284 DPLGMLKV 291
DPL LK+
Sbjct: 253 DPLVELKL 260
>gi|219113079|ref|XP_002186123.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209582973|gb|ACI65593.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 324
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 122/281 (43%), Gaps = 36/281 (12%)
Query: 36 PLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHS 95
P++Y DY SF LH F K+ R L + C E+S LV
Sbjct: 1 PIVYHEDY--SFADWPSLHTFPMDKFARTAHALLT------TCKATYPESSLPRPLVRQE 52
Query: 96 ESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYP------FRKQVG----------- 138
+ + L + P ++F + + ++ + FR+Q G
Sbjct: 53 LDFFRPLDFGDVPRSWLSGPIDSVFVDRFLNAQLSHEECRVIGFREQTGRTELIRRTVLE 112
Query: 139 --GTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIH-YAFVQLNISRVMI 195
GT+L ++LA G A +V GG HH G G+ + D+++ H + ++ RV++
Sbjct: 113 VAGTVLTSQLACRYGIAAHVAGGTHHAHVTGGAGYTIFNDLAVATHVVTATEPSVERVLV 172
Query: 196 IDLDAHQGNGHEK-----DFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTN 250
ID D HQG+G + D S++Y L + YPR +A D V + +
Sbjct: 173 IDCDVHQGDGTARFSAAPDGPLHSKLYTLSLHCASNYPR-LKAHSTWD--VGLPDRMEDD 229
Query: 251 EYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
EY+ L A++VA P+LV+Y+AG D+ D LG L +
Sbjct: 230 EYMDALVRAVDVALAAAQPDLVLYDAGVDVYRKDKLGRLHL 270
>gi|407275572|ref|ZP_11104042.1| acetoin utilization protein [Rhodococcus sp. P14]
Length = 423
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 122/273 (44%), Gaps = 22/273 (8%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
+++SPDY G HP + ++ G L+ + P A+ DLL +H+
Sbjct: 20 VVWSPDYLDYRWGPS--HPMNPTRLDLTMALSRGLGLLEGVETLRPPAATDADLLRIHTP 77
Query: 97 SYLKSLQSSPNVSIIIEVPPVALFPNCL-VQRKVLYPFRKQV-----GGTILAAK--LAK 148
+Y+++++ + N+ P A P+ L + ++P + GGT+ AA+ A
Sbjct: 78 AYVEAVKHAGNLPPGSTAGPEA--PHGLGTEDNPIFPRMHEASAVLAGGTLAAAREIAAG 135
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEK 208
A+++GGG HH AD GFC Y D ++ I + + R+ +D+DAH G+G +
Sbjct: 136 RTRRAVSIGGGMHHAMADWAAGFCVYNDAAIAISW-LLDNGFDRIAYLDVDAHHGDGVQH 194
Query: 209 DFSSDSRVYILDMF-NPG-IYPRDYEARRFIDQKVE-------VVSGTTTNEYLKKLDEA 259
F D RV + + +P ++P + E V+ GT +L+
Sbjct: 195 AFLGDPRVLTVSVHQHPATLWPNTGWSSEIGTGAAEGTAVNLPVLPGTVDALWLRAFHAV 254
Query: 260 LEVAGHTFDPELVIYNAGTDILEGDPLGMLKVK 292
+ A F P+++I G D DPL L +
Sbjct: 255 VPAAVAAFRPQIIISQCGADSHREDPLADLSLT 287
>gi|315428106|dbj|BAJ49693.1| acetoin utilization protein AcuC [Candidatus Caldiarchaeum
subterraneum]
Length = 317
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 112/252 (44%), Gaps = 24/252 (9%)
Query: 54 HPFDSSKWGRICQFLSSEG-FLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSI-I 111
HP + + Q L SEG L VEP +A K+D+++ H+ +Y++ ++ V
Sbjct: 22 HPLNRVRLEAFYQKLDSEGKNLQGLLFVEPEKAGKDDVMLFHTPAYVEFVEERCRVGKGY 81
Query: 112 IEVPPVALFPNCLVQRKVLYPFRKQVGGTI--LAAKLAKERGWAINVGGGFHHCSADEGG 169
+E FP C + VG T+ L ++ E N GG HH D G
Sbjct: 82 LEYGDTPAFPGCFEAASYV------VGTTLKLLRMIISGEISAGFNPMGGLHHARRDRAG 135
Query: 170 GFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG--IY 227
GFC + D + I Y + N+ V +D+DAH G+G DF S+ RV D+ G +Y
Sbjct: 136 GFCIFNDAGVAIEYLLRRENMRNVAYVDIDAHHGDGVCYDFYSEKRVIFADIHQDGRTLY 195
Query: 228 P--------RDYEARRFIDQKVEVVSGTTTNEYLKKLDEALE-VAGHTFDPELVIYNAGT 278
P + EAR + ++ + E+ + E + + H FD ++ G
Sbjct: 196 PGTGFRNETGEGEARG-TKLNIPLLPYSGDEEFFQAFQEVEQFLEKHEFD--FLLLQCGA 252
Query: 279 DILEGDPLGMLK 290
D L GDPL L+
Sbjct: 253 DGLMGDPLTNLQ 264
>gi|297583577|ref|YP_003699357.1| histone deacetylase [Bacillus selenitireducens MLS10]
gi|297142034|gb|ADH98791.1| Histone deacetylase [Bacillus selenitireducens MLS10]
Length = 389
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 120/272 (44%), Gaps = 28/272 (10%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
IYSP+ + + + HPF+ + L G LD++ IV EAS E+LL+VH E
Sbjct: 7 FIYSPE-QLKYR-FHQEHPFNQKRLSITKDLLIKLGALDEDRIVPAREASIEELLLVHDE 64
Query: 97 SYLKSL--------QSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAK 148
Y++++ +SS + I F + L VGGT+ A
Sbjct: 65 DYIQAVLNASEGQVRSSYRTAFGIGTDDTPAFTDMHQAAAWL------VGGTLEAVDQVF 118
Query: 149 ERGW--AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
E+G A+N+GGG HH + GFC Y D S+ I Y + +RV+ +D DAH G+G
Sbjct: 119 EKGHKHALNLGGGLHHGFKGKASGFCIYNDSSIAIEYIRRKYG-ARVLYVDTDAHHGDGV 177
Query: 207 EKDFSSDSRVYILDMFNPG--IYP-------RDYEARRFIDQKVEVVSGTTTNEYLKKLD 257
+ F +DS V + G ++P R + + V + T +L
Sbjct: 178 QWAFYNDSDVCTFSVHESGRFLFPGTGNVNERGHGDGYGTSFNIPVEAFTEDESFLHVYK 237
Query: 258 EALEVAGHTFDPELVIYNAGTDILEGDPLGML 289
EA+ F P++++ G D DPL L
Sbjct: 238 EAMRSIVDHFKPDVILTQNGADAHYYDPLTHL 269
>gi|15922638|ref|NP_378307.1| acetoin utilization protein AcuC [Sulfolobus tokodaii str. 7]
Length = 362
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 114/248 (45%), Gaps = 18/248 (7%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQ-SSPNVSIII 112
HPF S + + L G + IV P S+E L ++H++ Y++ ++ S S ++
Sbjct: 33 HPFKSLREAMTKKLLEERGAFHEIDIVPPKVISEELLSLIHTKEYIEFIKRKSEEGSGLL 92
Query: 113 EVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFC 172
+ F + +V GT+ A +L + IN+GGGFHH + GFC
Sbjct: 93 DEGDTPAFKGIFEAALI------RVSGTVTAVELLQSYDHTINIGGGFHHAKRSQASGFC 146
Query: 173 AYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVY--ILDMFNPGIYP-- 228
+ D++L I A + + ++ ++D+D H G+G + D +V L MF+P +P
Sbjct: 147 VFNDVALAIKLA--ERSFKKIALVDIDGHHGDGTQYLLYDDPKVLKVSLHMFHPRFFPGT 204
Query: 229 -RDYE----ARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEG 283
+YE + + + + GT + YL +E + F P+L+ G D
Sbjct: 205 GDEYEIGSGEGKGMTINIPLPPGTGDDMYLYAFNEIVVPKIKEFKPDLIFLLNGGDSYYE 264
Query: 284 DPLGMLKV 291
DPL LK+
Sbjct: 265 DPLVELKL 272
>gi|339254540|ref|XP_003372493.1| putative histone deacetylase family protein [Trichinella spiralis]
gi|316967078|gb|EFV51568.1| putative histone deacetylase family protein [Trichinella spiralis]
Length = 441
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 117/266 (43%), Gaps = 15/266 (5%)
Query: 39 YSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESY 98
Y D +I + HP + + S G ++ I PL A+ + + HS+ Y
Sbjct: 10 YYYDAEIGCYHYGRGHPMRPFRITLTHNLICSYGLNERMKIYRPLRATADQMKQFHSDDY 69
Query: 99 LKSLQSSPNVSIIIEVPPVALF---PNCLVQRKVLYPFRKQVGGTILAAK--LAKERGWA 153
++ L+S + +I + + +C + + + GG++ A+ ++E
Sbjct: 70 IEFLKSKDGMEELIFTKSMHRYNVGDDCPLFNGMFSFCQISAGGSLACAQKITSEEADIV 129
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSD 213
IN GGG HH + E GFC DI L I + RV+ ID+D H G+G E+ F +
Sbjct: 130 INWGGGLHHARSREASGFCYVNDIVLAILHLLEYY--QRVLYIDIDCHHGDGVEEAFYAT 187
Query: 214 SRVYILDM-----FNPG---IYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGH 265
+RV + F PG I + R+ V + G T Y + + + +A
Sbjct: 188 NRVLTMSFHKFGEFFPGSGDINDIGADEGRYYAVNVPLRDGITDEYYQQLFEPIVHMAVQ 247
Query: 266 TFDPELVIYNAGTDILEGDPLGMLKV 291
F P +++ G+D L GD LG+L +
Sbjct: 248 YFQPNVIVMQCGSDSLSGDRLGVLNL 273
>gi|219109378|pdb|3EZP|A Chain A, Crystal Structure Analysis Of Human Hdac8 D101n Variant
gi|219109379|pdb|3EZP|B Chain B, Crystal Structure Analysis Of Human Hdac8 D101n Variant
Length = 388
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 118/271 (43%), Gaps = 25/271 (9%)
Query: 30 IPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKED 89
+P++ IYSP+Y + K+ + + + + + IV+P AS E+
Sbjct: 15 VPVY----IYSPEYVSMCDSLAKI----PKRASMVHSLIEAYALHKQMRIVKPKVASMEE 66
Query: 90 LLVVHSESYLKSLQ--SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLA 147
+ H+++YL+ LQ S + L NC + + + +GG + A
Sbjct: 67 MATFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYNCPATEGI-FDYAAAIGGATITAAQC 125
Query: 148 KERGW---AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
G AIN GG+HH DE GFC D L I ++ R++ +DLD H G+
Sbjct: 126 LIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGI--LRLRRKFERILYVDLDLHHGD 183
Query: 205 GHEKDFSSDSRVYILDM--FNPGIYPRDYEAR-------RFIDQKVEVVSGTTTNEYLKK 255
G E FS S+V + + F+PG +P + R+ V + G +Y +
Sbjct: 184 GVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQI 243
Query: 256 LDEALEVAGHTFDPELVIYNAGTDILEGDPL 286
+ L+ F+P+ V+ G D + GDP+
Sbjct: 244 CESVLKEVYQAFNPKAVVLQLGADTIAGDPM 274
>gi|355704918|gb|EHH30843.1| hypothetical protein EGK_20633 [Macaca mulatta]
gi|355757466|gb|EHH60991.1| hypothetical protein EGM_18899 [Macaca fascicularis]
Length = 377
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 118/271 (43%), Gaps = 25/271 (9%)
Query: 30 IPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKED 89
IP++ IYSP+Y + K+ + + + + + IV+P AS E+
Sbjct: 15 IPVY----IYSPEYVSMCDSLAKI----PKRASMVHSLIEAYALHKQMRIVKPKVASMEE 66
Query: 90 LLVVHSESYLKSLQ--SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLA 147
+ H+++YL+ LQ S + L +C + + + VGG + A
Sbjct: 67 MATFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYDCPATEGI-FDYAAAVGGATITAAQC 125
Query: 148 KERGW---AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
G AIN GG+HH DE GFC D L I ++ R++ +DLD H G+
Sbjct: 126 LIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGI--LRLRRKFERILYVDLDLHHGD 183
Query: 205 GHEKDFSSDSRVYILDM--FNPGIYPRDYEAR-------RFIDQKVEVVSGTTTNEYLKK 255
G E FS S+V + + F+PG +P + R+ V + G +Y +
Sbjct: 184 GVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQI 243
Query: 256 LDEALEVAGHTFDPELVIYNAGTDILEGDPL 286
+ L+ F+P+ V+ G D + GDP+
Sbjct: 244 FESVLKEVYQAFNPKAVVLQLGADTIAGDPM 274
>gi|381211229|ref|ZP_09918300.1| histone deacetylase superfamily protein [Lentibacillus sp. Grbi]
Length = 368
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 107/242 (44%), Gaps = 21/242 (8%)
Query: 63 RICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPN 122
R+ L F+D+ + P EA+++++L+ HS+ Y+ ++ + + P+
Sbjct: 45 RVKNLLERSRFMDELQQISPREATRQEILINHSKEYINKIKELSDAGGGDAGVHAIVGPD 104
Query: 123 CLVQRKVLYPFR-KQVGGTILAAKLAKER----GWAINVGGGFHHCSADEGGGFCAYADI 177
Y K GG + + E +A+ G HH EG GFC + ++
Sbjct: 105 S-------YEIALKSAGGVMTSVDAVMEEEVQNAYALVRPPG-HHAEPAEGMGFCLFNNV 156
Query: 178 SLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFI 237
++ YA + + R+ I+D D H GNG E F +DS V + + I+P+D A +
Sbjct: 157 AIAAKYAREKYGLKRIAILDWDVHHGNGTETAFENDSDVLFISVHQENIFPKDRGAITYT 216
Query: 238 DQ--------KVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGML 289
+ +E+ +GT Y D+ + + PEL+ +AG D DP+G +
Sbjct: 217 GKGDGEGYTVNIELPAGTGDEGYFYAFDQLIAPVFDQYAPELIFISAGQDASRFDPIGRM 276
Query: 290 KV 291
V
Sbjct: 277 SV 278
>gi|297304147|ref|XP_001093861.2| PREDICTED: histone deacetylase 8-like [Macaca mulatta]
Length = 415
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 118/271 (43%), Gaps = 25/271 (9%)
Query: 30 IPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKED 89
IP++ IYSP+Y + K+ + + + + + IV+P AS E+
Sbjct: 53 IPVY----IYSPEYVSMCDSLAKI----PKRASMVHSLIEAYALHKQMRIVKPKVASMEE 104
Query: 90 LLVVHSESYLKSLQ--SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLA 147
+ H+++YL+ LQ S + L +C + + + VGG + A
Sbjct: 105 MATFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYDCPATEGI-FDYAAAVGGATITAAQC 163
Query: 148 KERGW---AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
G AIN GG+HH DE GFC D L I ++ R++ +DLD H G+
Sbjct: 164 LIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGI--LRLRRKFERILYVDLDLHHGD 221
Query: 205 GHEKDFSSDSRVYILDM--FNPGIYPRDYEAR-------RFIDQKVEVVSGTTTNEYLKK 255
G E FS S+V + + F+PG +P + R+ V + G +Y +
Sbjct: 222 GVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQI 281
Query: 256 LDEALEVAGHTFDPELVIYNAGTDILEGDPL 286
+ L+ F+P+ V+ G D + GDP+
Sbjct: 282 FESVLKEVYQAFNPKAVVLQLGADTIAGDPM 312
>gi|89889818|ref|ZP_01201329.1| deacetylase [Flavobacteria bacterium BBFL7]
gi|89518091|gb|EAS20747.1| deacetylase [Flavobacteria bacterium BBFL7]
Length = 308
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 109/239 (45%), Gaps = 14/239 (5%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLE-ASKEDLLVVHSESYLKSLQSSPNVSIII 112
H F K+ + Q L EG ++ EP + S D+L VH+ YLK+L++ +++
Sbjct: 19 HRFPMVKYELLPQQLLLEGTANQTDFFEPSKLCSDTDVLRVHTSEYLKNLKA---LNLDR 75
Query: 113 EVPPVALFP--NCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGG 170
+ FP N LV+R+ LY + + G I A E A+N+ GG HH D G
Sbjct: 76 KAARKLGFPLNNQLVERE-LYIAQGTIDGCIKAF----EYNIAMNIAGGTHHAYTDHGEA 130
Query: 171 FCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRD 230
FC D ++ Y +++I+DLD HQGNG + F +D V+ M YP
Sbjct: 131 FCLLNDQAIAARYIQHHQLADKILIVDLDVHQGNGTAEIFRNDDSVFTFSMHGASNYPFK 190
Query: 231 YEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGML 289
E D + + T + YL +L L P+ + Y G D+L D LG L
Sbjct: 191 KEIS---DLDIALPDHTDDSSYLNELHHILPDLIAQEKPDFIFYLCGVDVLATDKLGRL 246
>gi|28898919|ref|NP_798524.1| histone deacetylase/AcuC/AphA family protein [Vibrio
parahaemolyticus RIMD 2210633]
gi|153838572|ref|ZP_01991239.1| histone deacetylase/AcuC/AphA family protein [Vibrio
parahaemolyticus AQ3810]
gi|260363629|ref|ZP_05776436.1| histone deacetylase/AcuC/AphA family protein [Vibrio
parahaemolyticus K5030]
gi|260896197|ref|ZP_05904693.1| histone deacetylase/AcuC/AphA family protein [Vibrio
parahaemolyticus Peru-466]
gi|260900725|ref|ZP_05909120.1| histone deacetylase/AcuC/AphA family protein [Vibrio
parahaemolyticus AQ4037]
gi|28807138|dbj|BAC60408.1| histone deacetylase/AcuC/AphA family protein [Vibrio
parahaemolyticus RIMD 2210633]
gi|149748037|gb|EDM58896.1| histone deacetylase/AcuC/AphA family protein [Vibrio
parahaemolyticus AQ3810]
gi|308088789|gb|EFO38484.1| histone deacetylase/AcuC/AphA family protein [Vibrio
parahaemolyticus Peru-466]
gi|308109740|gb|EFO47280.1| histone deacetylase/AcuC/AphA family protein [Vibrio
parahaemolyticus AQ4037]
gi|308115075|gb|EFO52615.1| histone deacetylase/AcuC/AphA family protein [Vibrio
parahaemolyticus K5030]
Length = 302
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 116/268 (43%), Gaps = 33/268 (12%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNC----IVEPLEASKEDL 90
LPLIY Y S L + + H + K+ Q+L E D EP S E +
Sbjct: 2 LPLIYHSIY--SRLELPEGHRYPIMKY----QYLYEEVRRDVQAEWVQFFEPQALSIEAI 55
Query: 91 LVVHSESYLKSLQSSPNVSIIIEVPPVAL----FP--NCLVQRKVLYPFRKQVGGTILAA 144
VH Y+ L +P + FP L+ R + GT+L A
Sbjct: 56 KRVHDADYVDLLAQG-------NMPAAKMRRIGFPWSEALITRTL-----TSAAGTLLTA 103
Query: 145 KLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
+ A E G A+++ GG+HH D G GFC + D+ + + ++ +++IID D H G+
Sbjct: 104 EKALEHGIALHLSGGYHHAHKDFGSGFCLFNDLVIAAKHMLDNEHVDKILIIDSDVHHGD 163
Query: 205 GHEKDFSSDSRVYILDMFNPGIYPRDYEARR-FIDQKVEVVSGTTTNEYLKKLDEALEVA 263
G + + L +P AR+ D V + GT +L E +E+A
Sbjct: 164 GTATLCQEEPDIVTLSFHCDKNFP----ARKPQSDLDVPLAKGTDDETFLMTFKEVVEMA 219
Query: 264 GHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ P++VIY+AG DI + D LG V
Sbjct: 220 LNLHRPDMVIYDAGVDIHQDDELGYFDV 247
>gi|377562735|ref|ZP_09792103.1| putative acetoin utilization protein [Gordonia sputi NBRC 100414]
gi|377530032|dbj|GAB37268.1| putative acetoin utilization protein [Gordonia sputi NBRC 100414]
Length = 414
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 114/256 (44%), Gaps = 21/256 (8%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HP + + S G LD + EPL + L VVHS Y+ ++++ + + +
Sbjct: 20 HPMNPVRLALTMTLAQSLGVLDDVDVSEPLAIGDDALTVVHSRDYIDAVRAVGSGTASLS 79
Query: 114 VPPVA-LF----PNCLVQRKVLYPFRKQVGGTILAAKL----AKERGWAINVGGGFHHCS 164
P + LF + V + R VGGT+ AA+ A R A+N+GGG HH
Sbjct: 80 GPLLERLFGLGDSDNPVFDGMHEAARLLVGGTLAAAQAVGSGAVRR--AVNIGGGMHHAM 137
Query: 165 ADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN- 223
GFC Y D ++ IH+ ++ R+ ID+DAH G+G + F+SD RV + +
Sbjct: 138 RSRAAGFCIYNDCAVAIHW-LLENGFDRIAYIDIDAHHGDGVQVAFASDPRVMTVSLHQH 196
Query: 224 -----PGI-YPRDY--EARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYN 275
PG +P + +A + ++ T +L+ + F P+++I
Sbjct: 197 PATLWPGTGWPTEVGEDAAEGSAVNIALMPDTQDRLWLRAFHAVVPSLIAEFKPQIIISQ 256
Query: 276 AGTDILEGDPLGMLKV 291
G D DPL L +
Sbjct: 257 CGADSHRADPLTDLSL 272
>gi|390169273|ref|ZP_10221214.1| histone deacetylase family protein [Sphingobium indicum B90A]
gi|389588136|gb|EIM66190.1| histone deacetylase family protein [Sphingobium indicum B90A]
Length = 321
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 108/244 (44%), Gaps = 27/244 (11%)
Query: 56 FDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVP 115
F K+G + + L+ + EP + + VH Y++ + + VP
Sbjct: 40 FRFDKYGLVMEALTMAAA--PFTVHEPAPMPRAWIEAVHDPDYVEQVATQ-------AVP 90
Query: 116 PVALFPNCLVQRKVLYPFRKQV--------GGTILAAKLAKERGWAINVGGGFHHCSADE 167
P +R++ +P +V GGT LAA+LA G+A N GG HH
Sbjct: 91 PEK-------ERRIGFPVTARVARRSMLSPGGTWLAARLAMRHGYAANAAGGSHHALPGS 143
Query: 168 GGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIY 227
G G+C + D+++ + + + R++I+DLD HQG ++ L + +
Sbjct: 144 GAGYCVFNDLAIAANRLIAEGDARRILILDLDVHQGVSTAVLTGGRGDIFTLSIHADRNF 203
Query: 228 PRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLG 287
P +AR +D + + GT Y+ L + + F P+L++Y AG D EGD LG
Sbjct: 204 PV-RKARSTLD--IGLPDGTGDEAYMDALMKVMPPVLDDFRPDLILYQAGVDPHEGDRLG 260
Query: 288 MLKV 291
L +
Sbjct: 261 RLAL 264
>gi|71733714|ref|YP_276468.1| histone deacetylase [Pseudomonas syringae pv. phaseolicola 1448A]
gi|71554267|gb|AAZ33478.1| histone deacetylase family protein [Pseudomonas syringae pv.
phaseolicola 1448A]
Length = 305
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 114/263 (43%), Gaps = 20/263 (7%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LPLIY DY F H F K+ + +L G ++ P + L +
Sbjct: 1 MSLPLIYHEDYSPDF---PADHRFPMDKFRLLRDYLVDSGLTSDVQLMRPELCPADILAL 57
Query: 93 VHSESYLKSLQS---SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
H SY+ + S + +P + L +R V VGG++L A+ A +
Sbjct: 58 AHDPSYISRYLNGDLSREDQRRLGLP----WSEALARRTV-----SAVGGSLLTAEQALK 108
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKD 209
G A ++ GG HH D GFC + D+++ Y + +V+I D D HQG+G +
Sbjct: 109 HGMACHLAGGTHHAHYDYPAGFCIFNDLAVISQYLLQSGRVDKVLIFDCDVHQGDGTARI 168
Query: 210 FSSDSRVYILDMFNPGIYPRDYEARRF-IDQKVEVVSGTTTNEYLKKLDEALEVAGHTFD 268
+ + + +P AR+ D + + G YL +D+ L +
Sbjct: 169 LADTEDAITVSLHCEKNFP----ARKAQSDWDIPLPMGMGDANYLNVVDDLLNYLLPFYK 224
Query: 269 PELVIYNAGTDILEGDPLGMLKV 291
P+LV+Y+AG D+ + D LG L++
Sbjct: 225 PDLVLYDAGVDVHKDDALGYLQL 247
>gi|395862306|ref|XP_003803399.1| PREDICTED: histone deacetylase 8 isoform 1 [Otolemur garnettii]
Length = 377
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 100/222 (45%), Gaps = 17/222 (7%)
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQ--SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQ 136
IV+PL AS E++ H+++YL+ LQ S + L +C + + +
Sbjct: 56 IVKPLVASMEEMATFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYDCPATEGI-FDYAAA 114
Query: 137 VGGTILAAKLAKERGW---AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRV 193
VGG + A G AIN GG+HH DE GFC D L I ++ R+
Sbjct: 115 VGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGI--LRLRRKFDRI 172
Query: 194 MIIDLDAHQGNGHEKDFSSDSRVYILDM--FNPGIYPRDYEAR-------RFIDQKVEVV 244
+ +DLD H G+G E FS S+V + + F+PG +P + R+ V +
Sbjct: 173 LYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQ 232
Query: 245 SGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPL 286
G +Y + L+ F+P+ V+ G D + GDP+
Sbjct: 233 DGIQDEKYYHICESVLKEVYQAFNPKAVVLQLGADTIAGDPM 274
>gi|110833112|ref|YP_691971.1| deacetylase [Alcanivorax borkumensis SK2]
gi|110646223|emb|CAL15699.1| deacetylase family protein [Alcanivorax borkumensis SK2]
Length = 290
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 84/169 (49%), Gaps = 10/169 (5%)
Query: 124 LVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHY 183
L++R + P GT++ +LA E G A ++ GG HH D G GFC + D +
Sbjct: 66 LLKRSCIAPM-----GTLMTTQLALENGIACHLAGGTHHAHYDFGSGFCIFNDQVFAVRQ 120
Query: 184 AFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP-RDYEARRFIDQKVE 242
+ +++V++ D D HQG+G + + R + + +P R + D VE
Sbjct: 121 LLDRGVVNKVLMFDCDVHQGDGTAAMLADEPRAFTCSIHCEKNFPVRKMRS----DLDVE 176
Query: 243 VVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ G T +YL + LE + P+LV+Y+AG DI + DPLG L +
Sbjct: 177 LPLGMTDQDYLDTVFSTLESLLKSEQPDLVLYDAGVDIFQHDPLGRLHI 225
>gi|331697762|ref|YP_004334001.1| histone deacetylase [Pseudonocardia dioxanivorans CB1190]
gi|326952451|gb|AEA26148.1| Histone deacetylase [Pseudonocardia dioxanivorans CB1190]
Length = 388
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 109/253 (43%), Gaps = 21/253 (8%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HP + + + G LD ++EP A+ E+L VH+ SYL +++S+P E
Sbjct: 22 HPLNPVRLDLTMRLARGLGVLDDVELLEPDPATDEELERVHAPSYLTAVRSAP------E 75
Query: 114 VPPVALFPNCLVQRKVLYPFRKQ----VGGTILAAK-LAKERGWAINVGGGFHHCSADEG 168
+P + + + GG++LAA+ +A A+N+ GG HH D
Sbjct: 76 MPFGVGHGLGTADNPIFFGMHESSALIAGGSLLAARQIAAGADRAVNIAGGLHHAMRDRA 135
Query: 169 GGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN----- 223
GFC Y D ++ I + Q R+ +D+D H G+G + F D RV + M
Sbjct: 136 AGFCVYNDCAVAIAWLLDQ-GYERIAYVDVDVHHGDGVQAAFYDDPRVLTVSMHQHPLTL 194
Query: 224 -PGI-YPRDYEARRFIDQKVEV--VSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTD 279
PG + +Y V V GT +L+ + + F P++++ G D
Sbjct: 195 WPGTGWATEYGVGDGAGYAVNVPLAPGTGDAGWLRAFEAIVPSLLANFRPQVLVSECGAD 254
Query: 280 ILEGDPLGMLKVK 292
DPL L++
Sbjct: 255 THSDDPLANLELS 267
>gi|357974943|ref|ZP_09138914.1| histone deacetylase superfamily protein [Sphingomonas sp. KC8]
Length = 304
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 119/262 (45%), Gaps = 28/262 (10%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
+++ PDY +S FD K+G L G + EP+ +E + VH
Sbjct: 4 IVHHPDY-VSPAAPGSRFSFD--KYGLAMMALDEAGAPFEMHEPEPM--PREWIAAVHDA 58
Query: 97 SYLKSLQSSPNVSIIIEVPP-------VALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE 149
Y+ + I VPP A+ P+ + +R L P GGT LAAKLA
Sbjct: 59 DYVDQV-------IAACVPPEKERRIGFAVTPH-VARRAQLVP-----GGTWLAAKLALA 105
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKD 209
G+A N GG HH AD G G+C + D+++ + Q + RVMI+DLD HQG+G
Sbjct: 106 HGFAANSAGGSHHALADTGAGYCVFNDLAITANRLIAQGDAKRVMIVDLDVHQGDGTAIL 165
Query: 210 FSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDP 269
+ V+ L + +P +AR +D + + + LD L+ A F P
Sbjct: 166 MAGRDDVFTLSIHADKNFPA-RKARSSLDAALADGADDAAYLAV--LDAHLDPAIDGFQP 222
Query: 270 ELVIYNAGTDILEGDPLGMLKV 291
+L++Y AG D D LG L +
Sbjct: 223 DLILYQAGVDPHIEDRLGRLAL 244
>gi|47087397|ref|NP_998596.1| histone deacetylase 8 [Danio rerio]
gi|82240175|sp|Q7SXM0.1|HDAC8_DANRE RecName: Full=Histone deacetylase 8; Short=HD8
gi|33416863|gb|AAH55541.1| Histone deacetylase 8 [Danio rerio]
Length = 378
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 117/263 (44%), Gaps = 21/263 (7%)
Query: 38 IYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSES 97
+YSP+Y + + K+ ++ + + + G L +V+P AS E++ V H++S
Sbjct: 20 VYSPEYIQTCDSLSKV----PNRASMVHSLIEAYGLLKYMRVVKPHVASIEEMAVFHTDS 75
Query: 98 YLKSLQ--SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK---LAKERGW 152
YL+ L S + + L +C V + + + VGG L A L +
Sbjct: 76 YLQHLHKISQDGDNDDPQSADFGLGYDCPVVEGI-FDYAAAVGGATLTAAQNLLDGKCDV 134
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
AIN GG+HH DE G C D L I ++ RV+ +D+D H G+G E FS
Sbjct: 135 AINWAGGWHHAKKDEASGSCYVNDAVLGI--LKLREKYDRVLYVDVDLHHGDGVEDAFSF 192
Query: 213 DSRVYILDM--FNPGIYPRDYEAR-------RFIDQKVEVVSGTTTNEYLKKLDEALEVA 263
S+V + + F+PG +P + R+ V G + Y + ++
Sbjct: 193 TSKVMTVSLHKFSPGFFPGTGDVTDTGLGKGRWYAVNVPFEDGVRDDRYCQTFTSVMQEV 252
Query: 264 GHTFDPELVIYNAGTDILEGDPL 286
F+PE V+ G D + GDP+
Sbjct: 253 KALFNPEAVVMQLGADTMAGDPM 275
>gi|85703855|ref|ZP_01034958.1| acetoin utilization protein AcuC [Roseovarius sp. 217]
gi|85671175|gb|EAQ26033.1| acetoin utilization protein AcuC [Roseovarius sp. 217]
Length = 371
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 103/249 (41%), Gaps = 15/249 (6%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HP + + + G+L A + L H+ Y+ +LQ++ +
Sbjct: 21 HPLSIPRVPTVIDLCRALGWLPPAQYRTSPRAKPQALTTWHTPDYITALQAAETSGHV-- 78
Query: 114 VPPVALFPNCLVQRKVLYP--FRK---QVGGTILAAKLAKERGWAINVGGGFHHCSADEG 168
P + +YP FR+ GG++LA L G A N GGG HH AD
Sbjct: 79 TPEIRARHQIGTLSNPIYPEMFRRPATAAGGSLLATDLLAHGGVAYNPGGGTHHGMADHA 138
Query: 169 GGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
GGFC D L I AF+ +SR+ +D+DAH +G F D RV ++ G +P
Sbjct: 139 GGFCYLNDPVLAIK-AFLAQGLSRIAYVDIDAHHCDGVAAAFHGDPRVLMISTHEAGRWP 197
Query: 229 -----RDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEG 283
D I+ + + T + + L E + A +F P+ ++ G D +
Sbjct: 198 FTGTLHDRAGGHAIN--LPLPRATNDSGFAMALHEVILPAVQSFTPQALVLQCGADAVTE 255
Query: 284 DPLGMLKVK 292
DPL L +
Sbjct: 256 DPLSRLALS 264
>gi|254230476|ref|ZP_04923852.1| histone deacetylase family, putative [Vibrio sp. Ex25]
gi|262393694|ref|YP_003285548.1| histone deacetylase/AcuC/AphA family protein [Vibrio sp. Ex25]
gi|151937004|gb|EDN55886.1| histone deacetylase family, putative [Vibrio sp. Ex25]
gi|262337288|gb|ACY51083.1| histone deacetylase/AcuC/AphA family protein [Vibrio sp. Ex25]
Length = 307
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 122/270 (45%), Gaps = 33/270 (12%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQ----FLSSEGFLDKNCIVEPLEASKEDL 90
LP IY P Y S L + + H + K+ + + + + + + +P + E++
Sbjct: 2 LPFIYHPIY--SQLELPEGHRYPIMKYQYLYESVLVHMEKDNWKEHVQFFQPEALTVEEV 59
Query: 91 LVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTIL 142
VH + Y+ L + +P + R++ +P+ + + GT L
Sbjct: 60 KRVHDQEYVDLLVNG-------NMPAAKM-------RRIGFPWSESLITRTLTSAAGTAL 105
Query: 143 AAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQ 202
A A E G AI++ GG+HH + G GFC + D+ + A ++ +V+IID D H
Sbjct: 106 TANKALEYGVAIHLSGGYHHAHKEFGSGFCLFNDLVIAARQALEVEHVDKVLIIDSDVHH 165
Query: 203 GNGHEKDFSSDSRVYILDMFNPGIYPRDYEARR-FIDQKVEVVSGTTTNEYLKKLDEALE 261
G+G + + L +P AR+ D V +V GT ++L E ++
Sbjct: 166 GDGTATLCHDEPDIITLSFHCDKNFP----ARKPQSDLDVPLVRGTGDEDFLMAFKEVVD 221
Query: 262 VAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+A + P+LVIY+AG DI + D LG V
Sbjct: 222 MALNLHRPDLVIYDAGVDIHQDDELGYFDV 251
>gi|452960743|gb|EME66058.1| acetoin utilization protein [Rhodococcus ruber BKS 20-38]
Length = 423
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 122/273 (44%), Gaps = 22/273 (8%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
+++SPD+ G HP + ++ G L+ + P A+ DLL +H+
Sbjct: 20 VVWSPDFLDYRWG--PTHPMNPTRLDLTMALSRGLGLLEGVETLRPPAATDADLLRIHTP 77
Query: 97 SYLKSLQSSPNVSIIIEVPPVALFPNCL-VQRKVLYPFRKQV-----GGTILAAK--LAK 148
+Y+++++ + N+ P A P+ L + ++P + GGT+ AA+ A
Sbjct: 78 AYVEAVKHAGNLPPGSSAGPEA--PHGLGTEDNPIFPRMHEASAVLAGGTLAAAREIAAG 135
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEK 208
A+++GGG HH AD GFC Y D ++ I + + R+ +D+DAH G+G +
Sbjct: 136 RTRRAVSIGGGMHHAMADWAAGFCVYNDAAIAISW-LLDNGFDRIAYLDVDAHHGDGVQH 194
Query: 209 DFSSDSRVYILDMF-NPG-IYPRDYEARRFIDQKVE-------VVSGTTTNEYLKKLDEA 259
F D RV + + +P ++P + E V+ GT +L+
Sbjct: 195 AFLGDPRVLTVSIHQHPATLWPNTGWSSEIGTGAAEGTAVNLPVLPGTVDALWLRAFHAV 254
Query: 260 LEVAGHTFDPELVIYNAGTDILEGDPLGMLKVK 292
+ A F P+++I G D DPL L +
Sbjct: 255 VPAAVAAFRPQIIISQCGADSHREDPLADLSLT 287
>gi|441508325|ref|ZP_20990249.1| putative acetoin utilization protein [Gordonia aichiensis NBRC
108223]
gi|441447353|dbj|GAC48210.1| putative acetoin utilization protein [Gordonia aichiensis NBRC
108223]
Length = 414
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 116/256 (45%), Gaps = 21/256 (8%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HP + + S G LD + PL+ + L VVHS+ Y+ ++++ + + +
Sbjct: 20 HPMNPVRLALTMTLAQSLGVLDDIDVSPPLDIGDDALTVVHSQDYIDAVRAVGSGTASLS 79
Query: 114 VPPVA-LF----PNCLVQRKVLYPFRKQVGGTILAAKL----AKERGWAINVGGGFHHCS 164
P + LF + V + R VGGT+ AA+ A R A+N+GGG HH
Sbjct: 80 GPLLERLFGLGDSDNPVFDGMHEAARLLVGGTLAAAQAVGSGAVRR--AVNIGGGMHHAM 137
Query: 165 ADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN- 223
GFC Y D ++ IH+ ++ R+ ID+DAH G+G + F+SD RV + +
Sbjct: 138 RSRAAGFCIYNDCAVAIHW-LLENGFDRIAYIDIDAHHGDGVQVAFASDPRVMTVSLHQH 196
Query: 224 -----PGI-YPRDY--EARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYN 275
PG +P + +A + + ++ T +L+ + F P+++I
Sbjct: 197 PATLWPGTGWPTEVGEDAGQGAAVNIALMPDTRDRLWLRAFHAVVPSLIAEFKPQIIISQ 256
Query: 276 AGTDILEGDPLGMLKV 291
G D DPL L +
Sbjct: 257 CGADSHRADPLTDLSL 272
>gi|30022737|ref|NP_834368.1| acetoin utilization protein AcuC [Bacillus cereus ATCC 14579]
gi|423640267|ref|ZP_17615885.1| hypothetical protein IK9_00212 [Bacillus cereus VD166]
gi|29898296|gb|AAP11569.1| Acetoin utilization acuC protein [Bacillus cereus ATCC 14579]
gi|401281183|gb|EJR87096.1| hypothetical protein IK9_00212 [Bacillus cereus VD166]
Length = 397
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 109/255 (42%), Gaps = 26/255 (10%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + I+ P A+ E++ VH+E Y+ + L+ S
Sbjct: 29 HPFNQLRVTLTYDLLQKGGFISPSQIISPRTATDEEIAYVHTEEYINAVKRAGEGKLEKS 88
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
+S + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 89 IAMSYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 142
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 143 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 201
Query: 224 PGIY---------PRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIY 274
G Y R V + + T +LK ++ F P++++
Sbjct: 202 TGRYLFPGTGAVNERGQGNGYSYSFNVPLDAFTEDESFLKSYRTVVKEVAAYFKPDIILT 261
Query: 275 NAGTDILEGDPLGML 289
G D DPL L
Sbjct: 262 QNGADAHYYDPLTHL 276
>gi|376004310|ref|ZP_09782035.1| histone deacetylase/AcuC/AphA family protein (fragment)
[Arthrospira sp. PCC 8005]
gi|375327329|emb|CCE17788.1| histone deacetylase/AcuC/AphA family protein (fragment)
[Arthrospira sp. PCC 8005]
Length = 210
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 81/158 (51%), Gaps = 9/158 (5%)
Query: 137 VGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISL--CIHYAFVQLNIS-RV 193
+GG IL AKLA G A N GG HH + G GFC + DI++ C+ +L ++ ++
Sbjct: 1 MGGAILTAKLALSHGLACNTAGGTHHAFPNYGSGFCIFNDIAIAACV---MQKLGLAKKI 57
Query: 194 MIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYL 253
+I+DLD HQG+ F + V+ M +P ++ D+ + + G EYL
Sbjct: 58 LIVDLDVHQGDATAVIFQDNPHVFTFSMHCQANFP---AKKQTSDRDIPLAVGMEDEEYL 114
Query: 254 KKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ L L F P+LVIY+AG D GD LG L +
Sbjct: 115 QILASHLPDLLTEFRPDLVIYDAGVDTHIGDRLGKLAL 152
>gi|268551831|ref|XP_002633897.1| Hypothetical protein CBG19959 [Caenorhabditis briggsae]
Length = 935
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 114/267 (42%), Gaps = 32/267 (11%)
Query: 51 EKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLE--ASKEDLLVVHSESYLKSLQSSPNV 108
E HP ++ RI + L G LDK CI E A+ +++ +VH++ L L+ + +
Sbjct: 430 EDNHPEKPARTRRILKTLQESGVLDK-CIERNTERIATDDEIRMVHTKKMLDHLKQTETM 488
Query: 109 S-IIIEVPPVALFPNCLVQRKVLYPFRKQVGGTI-----LAAKLAKERGWAINVGGGFHH 162
+ F + + R L RK VG + + K A +R + V HH
Sbjct: 489 KDEELMEEAENEFNSIYLTRDSLKVARKAVGACLQSIDEIYKKPAGQRNALVIVRPPGHH 548
Query: 163 CSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDM- 221
SA + GFC + ++++ YA RV+I+D D H GNG ++ F D V + +
Sbjct: 549 ASASKSSGFCIFNNVAVAAKYAQRHHRAKRVLILDWDVHHGNGTQEIFYEDPSVMYMSIH 608
Query: 222 ------FNPGIYPRDYEARRFIDQKVEVVSGTTTN-----------EYLKKLDEALEVAG 264
F P P+DY D GT+ N EY +
Sbjct: 609 RHDKGNFYPIGEPKDY-----FDVGESAGEGTSVNVPFSGAPMGDLEYQMAFQRVIMPIA 663
Query: 265 HTFDPELVIYNAGTDILEGDPLGMLKV 291
+ F+P+LVI +AG D DPLG KV
Sbjct: 664 YQFNPDLVIISAGFDAAIDDPLGEYKV 690
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 67/144 (46%), Gaps = 14/144 (9%)
Query: 161 HHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILD 220
HH + GFC + +++ AF R++I+DLD H G G ++ F D RV+
Sbjct: 132 HHADSASPCGFCLFNNVAQAAEEAFFS-GAERILIVDLDVHHGQGTQRIFYEDKRVFYFS 190
Query: 221 -------MFNPGIYPRDYE---ARRFIDQKVEV---VSGTTTNEYLKKLDEALEVAGHTF 267
+F P + D++ A + V +G T ++YL L L F
Sbjct: 191 IHRHEHGLFWPHLPESDFDHIGAGLGVGYNANVPLNETGCTDSDYLSILFHVLMPLATQF 250
Query: 268 DPELVIYNAGTDILEGDPLGMLKV 291
DP VI +AG D L GDP+G +++
Sbjct: 251 DPHFVIISAGFDSLRGDPIGGMQL 274
>gi|402910540|ref|XP_003917932.1| PREDICTED: histone deacetylase 8 isoform 1 [Papio anubis]
Length = 415
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 118/271 (43%), Gaps = 25/271 (9%)
Query: 30 IPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKED 89
IP++ IYSP+Y + K+ + + + + + IV+P AS E+
Sbjct: 53 IPVY----IYSPEYVSMCDSLAKI----PKRASMVHSLIEAYALHKQMRIVKPKVASMEE 104
Query: 90 LLVVHSESYLKSLQ--SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLA 147
+ H+++YL+ LQ S + L +C + + + VGG + A
Sbjct: 105 MATFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYDCPATEGI-FDYAAAVGGATITAAQC 163
Query: 148 KERGW---AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
G AIN GG+HH DE GFC D L I ++ R++ +DLD H G+
Sbjct: 164 LIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGI--LRLRRKFERILYVDLDLHHGD 221
Query: 205 GHEKDFSSDSRVYILDM--FNPGIYPRDYEAR-------RFIDQKVEVVSGTTTNEYLKK 255
G E FS S+V + + F+PG +P + R+ V + G +Y +
Sbjct: 222 GVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQI 281
Query: 256 LDEALEVAGHTFDPELVIYNAGTDILEGDPL 286
+ L+ F+P+ V+ G D + GDP+
Sbjct: 282 CESVLKEVYQAFNPKAVVLQLGADTIAGDPM 312
>gi|313680385|ref|YP_004058124.1| histone deacetylase [Oceanithermus profundus DSM 14977]
gi|313153100|gb|ADR36951.1| Histone deacetylase [Oceanithermus profundus DSM 14977]
Length = 378
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 126/279 (45%), Gaps = 38/279 (13%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNC-IVEPLEASKEDLLVV 93
+P++Y P+Y G + HPF + + + L LD V ++A +ED+L V
Sbjct: 2 VPVVYRPEYLTYDFGPQ--HPFSPQRLAMLVELLEE---LDPAWGPVAAVQARREDVLTV 56
Query: 94 HSESYLKSLQSSPNVSIIIEVPPVAL-------FPNCLVQRKVLYPFRKQVGGTILAAKL 146
H+E +++ ++++ + ++ L FP + L VGGT+ A+L
Sbjct: 57 HAERFVRRVEAASQGAPPDDLDEYGLGTSDTPVFPGMDAAARWL------VGGTLTGARL 110
Query: 147 AKERGWA---INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQG 203
G A + +GGG HH D GFC Y D+++ IH+ F++ + RV+ +D+D H G
Sbjct: 111 VSG-GTARRVLQLGGGLHHAQFDRASGFCVYNDLAVAIHH-FLEAGM-RVLYVDVDVHHG 167
Query: 204 NGHEKDFSSDSRVYILDMFNPGIYPRDYEARRF-----------IDQKVEVVSGTTTNEY 252
+G + F D RV L + G Y F + +E +G Y
Sbjct: 168 DGVQWIFYKDPRVLTLSLHESGRYLFPGTGGVFELGQGGGTGYSWNLPLEPYTGDAC--Y 225
Query: 253 LKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
L+ + E A F P++++ AG D DPL L +
Sbjct: 226 LEGFERVFEKALAWFLPDVILVQAGADAHFLDPLADLML 264
>gi|352103131|ref|ZP_08959659.1| histone deacetylase superfamily protein [Halomonas sp. HAL1]
gi|350599536|gb|EHA15621.1| histone deacetylase superfamily protein [Halomonas sp. HAL1]
Length = 313
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 111/262 (42%), Gaps = 29/262 (11%)
Query: 41 PDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLK 100
PD + +G E HP + I LS G L + + EA +E L VH +L+
Sbjct: 9 PDCSLHHMGPE--HPESPQRLEAIRARLSLAGLLQQTMQADAKEACEEALARVHPLRHLR 66
Query: 101 SLQSS-PNVSIIIEVPPVALFPNCL---------VQRKVLYPFRKQVGGTILAAKLAKER 150
+L+ P+ I+ + PN L V R V F++Q A +
Sbjct: 67 ALEKCLPSEGIVTLDSDTMMNPNSLKAARVAAGAVIRGVDQVFKRQADNVFCAVRPPG-- 124
Query: 151 GWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDF 210
HH A + GFC Y +I++ +A + R+ I+D D HQ NG F
Sbjct: 125 ----------HHAEASDAMGFCFYNNIAVGAAHARAKYGAKRIAILDFDVHQCNGTIDIF 174
Query: 211 SSDSRVYILDMFNPGIYPRDY---EARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTF 267
+D V I F YP Y E + ++ +EV G+ E+ + ++ A H F
Sbjct: 175 KNDPEVLICTSFQYPFYPWRYLRSEWQNVVNTPLEV--GSDGREFRRVVENHWLPALHAF 232
Query: 268 DPELVIYNAGTDILEGDPLGML 289
P+LV+ +AG D DP+G L
Sbjct: 233 KPDLVMISAGFDAHRDDPMGDL 254
>gi|379736729|ref|YP_005330235.1| acetoin dehydrogenase [Blastococcus saxobsidens DD2]
gi|378784536|emb|CCG04205.1| Acetoin dehydrogenase [Blastococcus saxobsidens DD2]
Length = 393
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 119/268 (44%), Gaps = 26/268 (9%)
Query: 43 YDISFLG--IEKLHPFDSSKWGRICQFLSSEGFL--DKNCIVEPLEASKEDLLVVHSESY 98
+D + LG + HP + + S G L D+ ++ P A ++ L +VH Y
Sbjct: 9 WDDALLGYTMGGDHPLHPVRLDLTMRLADSLGVLATDRLRVLTPTPAGEDLLTLVHDPRY 68
Query: 99 LKSLQSSPNVSII---IEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG--WA 153
L++++ +P V + + P +FP+ ++ GG++LAA+ A
Sbjct: 69 LEAVRQAPFVPDVGHGMGTPDNPVFPDMYDAAALI------TGGSVLAAQQVHSGAAQHA 122
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSD 213
+N+ GG HH D GFC + D ++ I + Q R+ +DLD H G+G + F D
Sbjct: 123 VNISGGLHHAMRDRASGFCVFNDAAVAIAWLLRQ-GYERIAYVDLDVHHGDGVQTAFYDD 181
Query: 214 SRVYILDMFN------PGI-YPRDY-EARRFIDQKVEVV--SGTTTNEYLKKLDEALEVA 263
RV + + PG YP + +A + + V + +GT + +L+ +
Sbjct: 182 PRVLTVSIHQTPLTLFPGTGYPEETGDAEKALGSAVNLALPNGTDDSAWLRAFTAVVPSV 241
Query: 264 GHTFDPELVIYNAGTDILEGDPLGMLKV 291
F P++++ G D DPL L +
Sbjct: 242 LQAFQPQIIVTQCGCDAHHEDPLADLAL 269
>gi|342183903|emb|CCC93383.1| histone deacetylase 1 [Trypanosoma congolense IL3000]
Length = 388
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 103/229 (44%), Gaps = 16/229 (6%)
Query: 80 VEPLEASKEDLLVVHSESYLKSLQSSPNVSII--IEVPPVALFPNCLVQRKVLYPFRKQV 137
V P S +LL H+E Y+ +L N S + EV V+ +C ++ V
Sbjct: 57 VVPPPISINELLTYHAEDYILNLGLHNNRSWLWNTEVSKVSFSGDCPPVEGIVEHSLSIV 116
Query: 138 GGTILAAKLAKERG--WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMI 195
G+++AA L AI+ GGG HH E GFC DI + I N RV+
Sbjct: 117 SGSLMAAILLNSGSVDIAIHWGGGMHHAKCGECSGFCYVNDIVIAIVELLKCYN--RVLY 174
Query: 196 IDLDAHQGNGHEKDFSSDSRVYILDM------FNPGI-YPRD--YEARRFIDQKVEVVSG 246
+DLD H G+G ++ F + +RV+ L + F PG +PRD E R+ + + G
Sbjct: 175 VDLDMHHGDGVDEAFCNSNRVFTLSLHKFGESFFPGTGHPRDIGIERGRYYTMNLALWDG 234
Query: 247 TTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV-KWG 294
Y + AL F PE+V+ G D L GD LG + WG
Sbjct: 235 IDDFFYTTVFERALASIVGRFAPEIVVLQCGADSLSGDRLGHFNLSSWG 283
>gi|337287997|ref|YP_004627469.1| histone deacetylase superfamily [Thermodesulfobacterium sp. OPB45]
gi|334901735|gb|AEH22541.1| histone deacetylase superfamily [Thermodesulfobacterium geofontis
OPF15]
Length = 350
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 105/253 (41%), Gaps = 24/253 (9%)
Query: 53 LHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIII 112
HP + I + L E + P A+KE++L HSE YL +L
Sbjct: 20 FHPESPQRLQAIWERLQKEDIAPYIEVFPPDIATKEEILWNHSE-YLYNLIEHTKGK--- 75
Query: 113 EVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGF-------HHCSA 165
P L P+ + K VG A KL E G+ G F HH
Sbjct: 76 --PYTQLDPDTATNEYSFFAALKAVGAQKTALKLLFEEGYR----GTFALVRPPGHHAEK 129
Query: 166 DEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG 225
D GFC + ++++ +YA + +++I+D D H GNG +K F SD V +
Sbjct: 130 DRAMGFCLFNNVAIAAYYAKNYYGLKKILIVDWDLHHGNGTQKSFYSDPEVLYFSVHQYP 189
Query: 226 IYPRDYEARRFIDQK-------VEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGT 278
YP + K V + + EY+ E L F+PE+++ +AG
Sbjct: 190 YYPGTGHYSEIGEGKGIGFTLNVPLPAYCGDEEYIYIFKEFLGPIALQFEPEIIMVSAGF 249
Query: 279 DILEGDPLGMLKV 291
D+ EGDPLG ++V
Sbjct: 250 DLCEGDPLGNMEV 262
>gi|327287942|ref|XP_003228687.1| PREDICTED: histone deacetylase 8-like [Anolis carolinensis]
Length = 370
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 111/263 (42%), Gaps = 21/263 (7%)
Query: 38 IYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSES 97
+YSP+Y + K+ + + + + LD IV P AS E++ H+++
Sbjct: 12 VYSPEYVARCDALCKV----PRRASMVHSLIKAYSLLDHMRIVRPKVASMEEMATFHTDA 67
Query: 98 YLKSLQ--SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG---W 152
YL L+ S E L +C + + + VGG + A G
Sbjct: 68 YLHHLRKVSEEGDDDDPESVEYGLGYDCPTSEGI-FDYAAAVGGATITAAQCLVDGKCQV 126
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
AIN GG+HH DE GFC D L I ++ RV+ +DLD H G+G E FS
Sbjct: 127 AINWHGGWHHAKKDEASGFCYLNDAVLGI--LQLRRKFERVLYVDLDLHHGDGVEDAFSF 184
Query: 213 DSRVYILDM--FNPGIYPRDYEAR-------RFIDQKVEVVSGTTTNEYLKKLDEALEVA 263
S+V + + F+PG +P + R+ V + G Y + + L+
Sbjct: 185 TSKVMTVSLHKFSPGFFPGTGDVTDVGLGKGRYYSVNVPIQDGIQDERYYQICETVLKEV 244
Query: 264 GHTFDPELVIYNAGTDILEGDPL 286
F PE V+ G D + GDP+
Sbjct: 245 YAAFSPEAVVLQLGADTIAGDPM 267
>gi|405950370|gb|EKC18363.1| Histone deacetylase 8 [Crassostrea gigas]
Length = 488
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 127/285 (44%), Gaps = 22/285 (7%)
Query: 18 RNRILSSKLYFDIPIFKLPL-IYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDK 76
R+ +SSK D K P+ IYSP+ + K+ ++ ++ + + G L+
Sbjct: 113 RDTTVSSKAQSDPDKQKKPVYIYSPELIQRCDAMPKI----INRASKVHTLIEAYGLLNS 168
Query: 77 NCIVEPLEASKEDLLVVHSESYLKSL----QSSPNVSIIIEVPPVALFPNCLVQRKVLYP 132
+V P A+ E++L H+E Y++ L + + + E L +C + R V
Sbjct: 169 MQVVPPRSATLEEMLGFHAEDYIQFLSLLGRQTDEEKLEEESEQYGLTYDCPINRHVYTY 228
Query: 133 FRKQVGGTILAAK--LAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNI 190
G ++ AA+ + + A+N GG+HH D GFC DI L I ++
Sbjct: 229 AALTSGASLRAAECLMEGQSQVAVNWCGGWHHAKRDMASGFCYINDIVLAI--LKLREKY 286
Query: 191 SRVMIIDLDAHQGNGHEKDFSSDSRVYILDM--FNPGIYPRD-------YEARRFIDQKV 241
RV+ +DLD H G+G E+ F +RV + + ++PG +P R +
Sbjct: 287 DRVLYVDLDVHHGDGVEEAFCGSTRVMTISVHKYSPGFFPGSGGLDSIGVGKGRGYTVNI 346
Query: 242 EVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPL 286
++ G E++ + L A F P+ ++ G D L GDP+
Sbjct: 347 PLLEGARDEEFVPLVCRVLHKAREVFSPQALVCQCGADGLSGDPM 391
>gi|374333861|ref|YP_005090548.1| histone deacetylase superfamily protein [Oceanimonas sp. GK1]
gi|372983548|gb|AEX99797.1| histone deacetylase superfamily protein [Oceanimonas sp. GK1]
Length = 368
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 105/242 (43%), Gaps = 25/242 (10%)
Query: 63 RICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLK--SLQSSPNVSIIIEVPPVALF 120
R+ L+ G L++ V A++EDLL H+E Y+ S+ S + P
Sbjct: 44 RLRNLLAVSGLLEQLTPVNAAPAAREDLLRFHTERYIDELSVMSEQGFGDAGQYAPF--- 100
Query: 121 PNCLVQRKVLYPFRKQVGGTILAAKLAK-----ERGWAINVGGGFHHCSADEGGGFCAYA 175
R+ +P + G +A A + G+ ++ G HH AD G GFC
Sbjct: 101 ------RQDAFPIACRSAGLAMATVAAVLNGEVDNGYCLSRPPG-HHAEADRGMGFCLLG 153
Query: 176 DISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP------- 228
+I + I A Q + RV +ID D H GNG ++ F D+ V L + + YP
Sbjct: 154 NIPIAIRAAQAQGLVRRVAVIDWDVHHGNGTQQAFYEDAEVLTLSLHHDNNYPVGSGSAE 213
Query: 229 -RDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLG 287
R A + V + +G+ YL +D+ + A F PEL++ G D DPLG
Sbjct: 214 ERGSGAGFGYNLNVPLPAGSGIGTYLAAMDQLVIPALDRFKPELIVVACGFDASAMDPLG 273
Query: 288 ML 289
+
Sbjct: 274 CM 275
>gi|237831431|ref|XP_002365013.1| histone deacetylase, putative [Toxoplasma gondii ME49]
gi|211962677|gb|EEA97872.1| histone deacetylase, putative [Toxoplasma gondii ME49]
Length = 280
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 90/174 (51%), Gaps = 11/174 (6%)
Query: 126 QRKVLYPFRK--------QVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADI 177
+RK+ +P K +V T+L LA G A VGGG HH D GG FC + D+
Sbjct: 54 ERKIGFPVTKGYADKSLAEVSSTVLGTWLAFHFGLACVVGGGTHHAKTDSGGKFCVFNDV 113
Query: 178 SLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFI 237
++ A Q R++I+DLD HQG+G + FS++ RV + + +P +A+ +
Sbjct: 114 AVAAALALKQGIAERILILDLDVHQGDGTAEIFSNEPRVKTVSIHCEDNFPFP-KAQSDV 172
Query: 238 DQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
D + + +GT YL++L+E L P L++Y AG DI E D G ++
Sbjct: 173 D--IGLPAGTGDEVYLRQLNEVLPRVLLEHRPTLILYVAGVDIHEQDTFGNFQI 224
>gi|223043530|ref|ZP_03613575.1| acetoin utilization protein AcuC [Staphylococcus capitis SK14]
gi|417905938|ref|ZP_12549732.1| histone deacetylase family protein [Staphylococcus capitis VCU116]
gi|222443018|gb|EEE49118.1| acetoin utilization protein AcuC [Staphylococcus capitis SK14]
gi|341598324|gb|EGS40835.1| histone deacetylase family protein [Staphylococcus capitis VCU116]
Length = 390
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 112/249 (44%), Gaps = 20/249 (8%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQ-SSPNVSIII 112
HPF+ + + L FL IV P A+ E+L ++H Y+++++ +S +
Sbjct: 25 HPFNQMRLKLTTELLKDANFLKNEHIVIPRIATDEELALIHQYDYIQAIRHASHGILSEH 84
Query: 113 EVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAIN---VGGGFHHCSADEGG 169
E L + +Q K ++ ++ G L G IN +GGG HH
Sbjct: 85 EAKKYGLNGDDTLQFKHMHRHSARIVGGALNLADCIMDGTFINGCHLGGGLHHALPGRAN 144
Query: 170 GFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG--IY 227
GFC Y D+++ Y V+ RVM+ID DAH G+G + F +D+R+ + G ++
Sbjct: 145 GFCIYNDVAITAKY-LVEKYHQRVMVIDTDAHHGDGTQWSFYTDNRIMTYSIHETGKFLF 203
Query: 228 PRDYEARRFIDQKVEVVSGTTTN----------EYLKKLDEALEVAGHTFDPELVIYNAG 277
P + + ++ ++ G T N Y++ E +E F P++++ G
Sbjct: 204 P---GSGHYTERGEDIGYGYTVNVPLEPYTEDASYIEVFKETVEPLVAAFKPDIILSVHG 260
Query: 278 TDILEGDPL 286
DI DPL
Sbjct: 261 VDIHYRDPL 269
>gi|428180359|gb|EKX49227.1| histone deacetylase HstD [Guillardia theta CCMP2712]
Length = 391
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 116/261 (44%), Gaps = 26/261 (9%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLE-ASKEDLLV 92
+L L Y+ DI + + + H F K+ + + + N +++P A +D+
Sbjct: 101 QLRLFYN---DIYHVELPQGHRFPMHKYRAVRERIHHAN--KPNIVLQPSPIARTDDIRT 155
Query: 93 VHSESYLKS-----LQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLA 147
H YL+ L N +I P V+R + VGGT+ A +
Sbjct: 156 THCHEYLRRFLCNMLTDKENRNIGFPWSPQG------VKRTL-----SSVGGTVAAMHSS 204
Query: 148 KERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQL-NISRVMIIDLDAHQGNGH 206
A ++ GG HH D G GFC ++DI++ + A +I +++I+D D HQGNG+
Sbjct: 205 TGHKLAGHIAGGTHHAFRDRGEGFCVFSDIAVAANVALRDYEHIKKILIVDCDVHQGNGN 264
Query: 207 EKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHT 266
F + V+ M G + + R+ D VE+ ++Y+ L L +A
Sbjct: 265 AVLFQDNPFVFTFSMHCAGNF---FSERQKSDLDVEIPVHCKDDDYMSLLHYWLPLAVDR 321
Query: 267 FDPELVIYNAGTDILEGDPLG 287
P+L+ Y +G D L GD LG
Sbjct: 322 SQPDLIFYQSGVDCLGGDKLG 342
>gi|297710326|ref|XP_002831848.1| PREDICTED: histone deacetylase 8 isoform 1 [Pongo abelii]
gi|426396408|ref|XP_004064436.1| PREDICTED: histone deacetylase 8 isoform 1 [Gorilla gorilla
gorilla]
Length = 415
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 118/271 (43%), Gaps = 25/271 (9%)
Query: 30 IPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKED 89
+P++ IYSP+Y + K+ + + + + + IV+P AS E+
Sbjct: 53 VPVY----IYSPEYVSMCDSLAKI----PKRASMVHSLIEAYALHKQMRIVKPKVASMEE 104
Query: 90 LLVVHSESYLKSLQ--SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLA 147
+ H+++YL+ LQ S + L +C + + + VGG + A
Sbjct: 105 MATFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYDCPATEGI-FDYAAAVGGATITAAQC 163
Query: 148 KERGW---AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
G AIN GG+HH DE GFC D L I ++ R++ +DLD H G+
Sbjct: 164 LIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGI--LRLRRKFERILYVDLDLHHGD 221
Query: 205 GHEKDFSSDSRVYILDM--FNPGIYPRDYEAR-------RFIDQKVEVVSGTTTNEYLKK 255
G E FS S+V + + F+PG +P + R+ V + G +Y +
Sbjct: 222 GVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQI 281
Query: 256 LDEALEVAGHTFDPELVIYNAGTDILEGDPL 286
+ L+ F+P+ V+ G D + GDP+
Sbjct: 282 CESVLKEVYQAFNPKAVVLQLGADTIAGDPM 312
>gi|221506821|gb|EEE32438.1| histone deacetylase, putative [Toxoplasma gondii VEG]
Length = 1127
Score = 87.4 bits (215), Expect = 7e-15, Method: Composition-based stats.
Identities = 58/174 (33%), Positives = 90/174 (51%), Gaps = 11/174 (6%)
Query: 126 QRKVLYPFRK--------QVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADI 177
+RK+ +P K +V T+L LA G A VGGG HH D GG FC + D+
Sbjct: 792 ERKIGFPVTKGYADKSLAEVSSTVLGTWLAFHFGLACVVGGGTHHAKTDSGGKFCVFNDV 851
Query: 178 SLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFI 237
++ A Q R++I+DLD HQG+G + FS++ RV + + +P +A+ +
Sbjct: 852 AVAAALALKQGIAERILILDLDVHQGDGTAEIFSNEPRVKTVSIHCEDNFPFP-KAQSDV 910
Query: 238 DQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
D + + +GT YL++L+E L P L++Y AG DI E D G ++
Sbjct: 911 D--IGLPAGTGDEVYLRQLNEVLPRVLLEHRPTLILYVAGVDIHEQDTFGNFQI 962
>gi|221487136|gb|EEE25382.1| histone deacetylase, putative [Toxoplasma gondii GT1]
Length = 1127
Score = 87.4 bits (215), Expect = 7e-15, Method: Composition-based stats.
Identities = 58/174 (33%), Positives = 90/174 (51%), Gaps = 11/174 (6%)
Query: 126 QRKVLYPFRK--------QVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADI 177
+RK+ +P K +V T+L LA G A VGGG HH D GG FC + D+
Sbjct: 792 ERKIGFPVTKGYADKSLAEVSSTVLGTWLAFHFGLACVVGGGTHHAKTDSGGKFCVFNDV 851
Query: 178 SLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFI 237
++ A Q R++I+DLD HQG+G + FS++ RV + + +P +A+ +
Sbjct: 852 AVAAALALKQGIAERILILDLDVHQGDGTAEIFSNEPRVKTVSIHCEDNFPFP-KAQSDV 910
Query: 238 DQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
D + + +GT YL++L+E L P L++Y AG DI E D G ++
Sbjct: 911 D--IGLPAGTGDEVYLRQLNEVLPRVLLEHRPTLILYVAGVDIHEQDTFGNFQI 962
>gi|380786835|gb|AFE65293.1| histone deacetylase 8 isoform 1 [Macaca mulatta]
gi|383419977|gb|AFH33202.1| histone deacetylase 8 isoform 1 [Macaca mulatta]
gi|384948214|gb|AFI37712.1| histone deacetylase 8 isoform 1 [Macaca mulatta]
Length = 377
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 100/222 (45%), Gaps = 17/222 (7%)
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQ--SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQ 136
IV+P AS E++ H+++YL+ LQ S + L +C + + +
Sbjct: 56 IVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYDCPATEGI-FDYAAA 114
Query: 137 VGGTILAAKLAKERGW---AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRV 193
VGG + A G AIN GG+HH DE GFC D L I ++ R+
Sbjct: 115 VGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGI--LRLRRKFERI 172
Query: 194 MIIDLDAHQGNGHEKDFSSDSRVYILDM--FNPGIYPRDYEAR-------RFIDQKVEVV 244
+ +DLD H G+G E FS S+V + + F+PG +P + R+ V +
Sbjct: 173 LYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQ 232
Query: 245 SGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPL 286
G +Y + + L+ F+P+ V+ G D + GDP+
Sbjct: 233 DGIQDEKYYQIFESVLKEVYQAFNPKAVVLQLGADTIAGDPM 274
>gi|320156918|ref|YP_004189297.1| histone deacetylase/AcuC/AphA family protein [Vibrio vulnificus
MO6-24/O]
gi|319932230|gb|ADV87094.1| histone deacetylase/AcuC/AphA family protein [Vibrio vulnificus
MO6-24/O]
Length = 312
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 119/274 (43%), Gaps = 34/274 (12%)
Query: 32 IFKLPLIYSPDYDISFLGIEKLHPFDSSKWGR----ICQFLSSE-GFLDKNCIVEPLEAS 86
+ +PLIY P Y S L + + H + K+ +C++ + +P S
Sbjct: 1 MMSIPLIYHPIY--SQLPLPEGHRYPIMKYHHLYQAVCRYQQQHLEWQQAFAFYQPEALS 58
Query: 87 KEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------G 138
E + VH + Y+ L + L P + R++ +P+ +++
Sbjct: 59 IEAIKQVHQQEYVDLLTT-------------GLLPAAKM-RRIGFPWSEKLIERTLTSTA 104
Query: 139 GTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDL 198
GT+L A+ A + G AI++ GG+HH D G GFC + D+ + H A ++ +V+IID
Sbjct: 105 GTVLTAEKALQHGVAIHLSGGYHHAHFDYGSGFCLFNDLVMAAHKALEHASVDKVLIIDS 164
Query: 199 DAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARR-FIDQKVEVVSGTTTNEYLKKLD 257
D H G+G + L +P AR+ D + + +L
Sbjct: 165 DVHHGDGTATLCQRRDDIVTLSFHCDKNFP----ARKPDSDLDIGLPRECGDEAFLAAFK 220
Query: 258 EALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
E + +A P+L+IY+AG DI D LG L V
Sbjct: 221 EVVPMAIRLHQPDLIIYDAGVDIHHEDELGYLNV 254
>gi|453073918|ref|ZP_21976716.1| histone deacetylase [Rhodococcus triatomae BKS 15-14]
gi|452765404|gb|EME23661.1| histone deacetylase [Rhodococcus triatomae BKS 15-14]
Length = 427
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 128/277 (46%), Gaps = 24/277 (8%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
+++SPDY +++ HP + ++ +S G ++ I+ P A+ DLL +H+
Sbjct: 18 VVWSPDY-LNYR-WSADHPMNPTRLDLTMSLATSLGLIEGAEIIAPEPATDADLLRIHTP 75
Query: 97 SYLKSLQ---SSPNVSIIIEVPPVAL-FPNCL-VQRKVLYPFRKQV-----GGTILAAK- 145
+ +++ S+ ++ E ++ P+ L + ++P + GGT+ AA+
Sbjct: 76 GLIAAVKEAGSAGAAQLLTEARADSVSAPHGLGSEDNPIFPRMHEASAILAGGTLAAARE 135
Query: 146 LAKERGW-AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
+A R A+++GGG HH AD GFC Y D ++ I + + R+ ID+DAH G+
Sbjct: 136 IASGRARRAVSIGGGMHHAMADWASGFCVYNDAAVAISW-LLDNGFDRIAYIDVDAHHGD 194
Query: 205 GHEKDFSSDSRVYILDMF-NPG-IYPRDYEARRF-------IDQKVEVVSGTTTNEYLKK 255
G + F D RV + + +P ++P + V V+ GT +L+
Sbjct: 195 GVQHAFLGDPRVLTVSLHQHPATLWPNTGWSSEVGSGPGEGTSVNVPVLPGTVDAVWLRA 254
Query: 256 LDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKVK 292
+ A F P++VI G D DPL L +
Sbjct: 255 FHAIVPAAVAAFRPQIVISQCGADSHREDPLADLSLT 291
>gi|333907538|ref|YP_004481124.1| histone deacetylase superfamily protein [Marinomonas posidonica
IVIA-Po-181]
gi|333477544|gb|AEF54205.1| histone deacetylase superfamily [Marinomonas posidonica
IVIA-Po-181]
Length = 317
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 110/260 (42%), Gaps = 18/260 (6%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
LPL++ P Y I F H F K+ + L +G L +P S L+ H
Sbjct: 6 LPLVFHPHYSIPF---PAGHRFPMHKFRLLADTLREQGILTSENEYQPEPLSLAVLMAAH 62
Query: 95 SESYLKSL---QSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERG 151
+ Y+ + + I +P + LV+R + + V GTIL ++LA + G
Sbjct: 63 DKQYVHRFIRGELTAKEEKDIGLP----WSEWLVERTL-----RAVSGTILTSQLALQHG 113
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A ++ GG HH G GFC + D+++ +V+I+D D HQG+G F
Sbjct: 114 LACHLAGGTHHAHPAHGAGFCIFNDLAVAALNLVNTKQAKKVLILDCDVHQGDGTIAFFP 173
Query: 212 SDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPEL 271
+ + YP ++ + + G T YL+ L + L +
Sbjct: 174 DHPNIVPVSWHCEENYP---NVKQTAGINIAIPKGATDETYLEILKDTLPTLLAEHRADF 230
Query: 272 VIYNAGTDILEGDPLGMLKV 291
+ Y+AG D+ + D LG +K+
Sbjct: 231 IFYDAGVDVHQEDRLGYVKL 250
>gi|440742521|ref|ZP_20921846.1| histone deacetylase superfamily protein [Pseudomonas syringae
BRIP39023]
gi|440377358|gb|ELQ14007.1| histone deacetylase superfamily protein [Pseudomonas syringae
BRIP39023]
Length = 305
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 116/260 (44%), Gaps = 14/260 (5%)
Query: 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLV 92
LPLIY DY F H F K+ + +L G ++ P + L +
Sbjct: 1 MSLPLIYHEDYSPDF---PADHRFPMDKFRLLRDYLIDSGLTSDVQLMRPELCPADILAL 57
Query: 93 VHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGW 152
H SY+ ++S + + L +R + + VGG++L A+ A + G
Sbjct: 58 AHDPSYINRYLDG-DLSREDQRRLGLPWSEALARRTI-----RAVGGSLLTAEQALKHGL 111
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
A ++ GG HH D GFC + D+++ + ++ +V+I D D HQG+G + +
Sbjct: 112 ACHLAGGTHHAHYDYPAGFCIFNDLAVISQFLLQSGSVDKVLIFDCDVHQGDGTARILAD 171
Query: 213 DSRVYILDMFNPGIYPRDYEARRF-IDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPEL 271
+ + +P AR+ D + + G +YL +D+ L + P+L
Sbjct: 172 TEDAITVSLHCEKNFP----ARKAQSDWDIPLPMGMGDVDYLNVVDDLLNYLLPFYKPDL 227
Query: 272 VIYNAGTDILEGDPLGMLKV 291
V+Y+AG D+ + D LG L++
Sbjct: 228 VLYDAGVDVHKDDALGYLQL 247
>gi|315427026|dbj|BAJ48643.1| acetoin utilization protein AcuC [Candidatus Caldiarchaeum
subterraneum]
gi|343485694|dbj|BAJ51348.1| acetoin utilization protein AcuC [Candidatus Caldiarchaeum
subterraneum]
Length = 317
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 112/252 (44%), Gaps = 24/252 (9%)
Query: 54 HPFDSSKWGRICQFLSSEG-FLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSI-I 111
HP + + Q L SEG L VEP +A K+D+++ H+ +Y++ ++ V
Sbjct: 22 HPLNRVRLEAFYQKLDSEGKNLQGLLFVEPEKAGKDDVMLFHTPAYVEFVEERCRVGKGY 81
Query: 112 IEVPPVALFPNCLVQRKVLYPFRKQVGGTI--LAAKLAKERGWAINVGGGFHHCSADEGG 169
++ FP C + VG T+ L ++ E N GG HH D G
Sbjct: 82 LDYGDTPAFPGCFEAASYV------VGTTLKLLRMIISGEISAGFNPMGGLHHARRDRAG 135
Query: 170 GFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG--IY 227
GFC + D + I Y + N+ V +D+DAH G+G DF S+ RV D+ G +Y
Sbjct: 136 GFCIFNDAGVAIEYLLRRENMRNVAYVDIDAHHGDGVCYDFYSEKRVIFADIHQDGRTLY 195
Query: 228 P--------RDYEARRFIDQKVEVVSGTTTNEYLKKLDEALE-VAGHTFDPELVIYNAGT 278
P + EAR + ++ + E+ + E + + H FD ++ G
Sbjct: 196 PGTGFRNETGEGEARG-TKLNIPLLPYSGDEEFFQAFQEVEQFLEKHEFD--FLLLQCGA 252
Query: 279 DILEGDPLGMLK 290
D L GDPL L+
Sbjct: 253 DGLMGDPLTNLQ 264
>gi|296505134|ref|YP_003666834.1| acetoin utilization protein AcuC [Bacillus thuringiensis BMB171]
gi|296326186|gb|ADH09114.1| acetoin utilization protein AcuC [Bacillus thuringiensis BMB171]
Length = 388
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 109/255 (42%), Gaps = 26/255 (10%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + I+ P A+ E++ VH+E Y+ + L+ S
Sbjct: 20 HPFNQLRVTLTYDLLQKGGFISPSQIISPRTATDEEIAYVHTEEYINAVKRAGEGKLEKS 79
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 80 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 133
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 134 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 192
Query: 224 PGIY---------PRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIY 274
G Y R V + + T +LK ++ F P++++
Sbjct: 193 TGRYLFPGTGAVNERGQGNGYSYSFNVPLDAFTEDESFLKSYRTVVKEVAAYFKPDIILT 252
Query: 275 NAGTDILEGDPLGML 289
G D DPL L
Sbjct: 253 QNGADAHYYDPLTHL 267
>gi|314933887|ref|ZP_07841252.1| acetoin utilization protein AcuC [Staphylococcus caprae C87]
gi|313654037|gb|EFS17794.1| acetoin utilization protein AcuC [Staphylococcus caprae C87]
Length = 390
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 112/249 (44%), Gaps = 20/249 (8%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQ-SSPNVSIII 112
HPF+ + + L FL IV P A+ E+L ++H Y+++++ +S +
Sbjct: 25 HPFNQMRLKLTTELLKDANFLKDEHIVIPRIATDEELALIHQYDYIQAIRHASHGILSEH 84
Query: 113 EVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAIN---VGGGFHHCSADEGG 169
E L + +Q K ++ ++ G L G IN +GGG HH
Sbjct: 85 EAKKYGLNGDDTLQFKHMHRHSARIVGGALNLVDCIMDGTFINGCHLGGGLHHALPGRAN 144
Query: 170 GFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG--IY 227
GFC Y D+++ Y V+ RVM+ID DAH G+G + F +D+R+ + G ++
Sbjct: 145 GFCIYNDVAITAKY-LVEKYHQRVMVIDTDAHHGDGTQWSFYTDNRIMTYSIHETGKFLF 203
Query: 228 PRDYEARRFIDQKVEVVSGTTTN----------EYLKKLDEALEVAGHTFDPELVIYNAG 277
P + + ++ ++ G T N YL+ E +E F P++++ G
Sbjct: 204 P---GSGHYTERGEDIGYGYTVNVPLEPYTEDASYLEVFKETVEPLVAAFKPDIILSVHG 260
Query: 278 TDILEGDPL 286
DI DPL
Sbjct: 261 LDIHYRDPL 269
>gi|167773833|gb|ABZ92351.1| histone deacetylase 8 [synthetic construct]
Length = 377
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 119/271 (43%), Gaps = 25/271 (9%)
Query: 30 IPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKED 89
+P++ IYSP+Y +S P +S + + + + IV+P AS E+
Sbjct: 15 VPVY----IYSPEY-VSMCDSPAKIPKRAS---MVHSLIEAYALHKQMMIVKPKVASMEE 66
Query: 90 LLVVHSESYLKSLQ--SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLA 147
+ H+++YL+ LQ S + L +C + + + +GG + A
Sbjct: 67 MATFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYDCPATEGI-FDYAAAIGGATITAAQC 125
Query: 148 KERGW---AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
G AIN GG+HH DE GFC D L I ++ R++ +DLD H G+
Sbjct: 126 LIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGI--LRLRRKFERILYVDLDLHHGD 183
Query: 205 GHEKDFSSDSRVYILDM--FNPGIYPRDYEAR-------RFIDQKVEVVSGTTTNEYLKK 255
G E FS S+V + + F+PG +P + R+ V + G +Y +
Sbjct: 184 GVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQI 243
Query: 256 LDEALEVAGHTFDPELVIYNAGTDILEGDPL 286
+ L+ F+P+ V+ G D + GDP+
Sbjct: 244 CESVLKEVYQAFNPKAVVLQLGADTIAGDPM 274
>gi|441674275|ref|XP_003280922.2| PREDICTED: histone deacetylase 8 [Nomascus leucogenys]
Length = 380
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 100/222 (45%), Gaps = 17/222 (7%)
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQ--SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQ 136
IV+P AS E++ H+++YL+ LQ S + L +C + + +
Sbjct: 17 IVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYDCPATEGI-FDYAAA 75
Query: 137 VGGTILAAKLAKERGW---AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRV 193
VGG + A G AIN GG+HH DE GFC D L I ++ R+
Sbjct: 76 VGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGI--LRLRRKFERI 133
Query: 194 MIIDLDAHQGNGHEKDFSSDSRVYILDM--FNPGIYPRDYEAR-------RFIDQKVEVV 244
+ +DLD H G+G E FS S+V + + F+PG +P + R+ V +
Sbjct: 134 LYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQ 193
Query: 245 SGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPL 286
G +Y + + L+ F+P+ V+ G D + GDP+
Sbjct: 194 DGIQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTIAGDPM 235
>gi|15606319|ref|NP_213698.1| acetoin utilization protein [Aquifex aeolicus VF5]
gi|2983524|gb|AAC07100.1| acetoin utilization protein [Aquifex aeolicus VF5]
Length = 375
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 113/250 (45%), Gaps = 18/250 (7%)
Query: 52 KLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSII 111
K HP + + +FL + +D+ +++ A+KE+LL+ H+E Y+ +L + +
Sbjct: 19 KNHPLKIPRVSLLLRFLDAMNLIDEKELIKSRPATKEELLLFHTEDYINTLMEAERCQCV 78
Query: 112 ----IEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADE 167
E + + N V + G T+ A + + A N GG HH
Sbjct: 79 PKGAREKYNIGGYENP-VSYAMFTGSSLATGSTVQAIEEFLKGNVAFNPAGGMHHAFKSR 137
Query: 168 GGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIY 227
GFC D ++ I Y + R++ IDLDAH +G ++ F +V++L + Y
Sbjct: 138 ANGFCYINDPAVGIEY-LRKKGFKRILYIDLDAHHCDGVQEAFYDTDQVFVLSLHQSPEY 196
Query: 228 PRDYEARRFIDQ-----------KVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNA 276
+E + F+++ + + G NE+L L+++LE+ F+PE+ +
Sbjct: 197 AFPFE-KGFLEEIGEGKGKGYNLNIPLPKGLNDNEFLFALEKSLEIVKEVFEPEVYLLQL 255
Query: 277 GTDILEGDPL 286
GTD L D L
Sbjct: 256 GTDPLLEDYL 265
>gi|296119939|ref|ZP_06838493.1| acetoin utilization protein AcuC [Corynebacterium ammoniagenes DSM
20306]
gi|295967093|gb|EFG80364.1| acetoin utilization protein AcuC [Corynebacterium ammoniagenes DSM
20306]
Length = 372
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 106/259 (40%), Gaps = 26/259 (10%)
Query: 44 DISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQ 103
+I + K HP + G +D + P A+ E L +VHS Y+++ +
Sbjct: 10 EIHNYSLGKGHPMGPDRVDSALDLARRLGIIDAFTVETPAAAADEILELVHSSEYIQATR 69
Query: 104 -SSPNV--SIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLA----KERGWAINV 156
PN+ I E PVA + + R GGT+ A + +R A+N+
Sbjct: 70 IHRPNLRFGIGTEDNPVAPGLSDVAARIS--------GGTLDAVRAVWDGKAQR--AVNL 119
Query: 157 GGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRV 216
GG HH D GFC Y D ++ I + RV ID DAH G+G EK F +D RV
Sbjct: 120 AGGLHHAFPDSMAGFCMYNDAAIAITWLLNNTEAQRVAYIDFDAHHGDGVEKIFWNDPRV 179
Query: 217 YILDMFNPGIY--PRDYEARRF-------IDQKVEVVSGTTTNEYLKKLDEALEVAGHTF 267
+ + G+Y P A V + +E+L+ + + F
Sbjct: 180 LTISIHESGLYLFPGTGHAHEIGGPDAAGTAVNVALSKNADDHEWLQSIHSVVPAVLKKF 239
Query: 268 DPELVIYNAGTDILEGDPL 286
PE+VI G D DPL
Sbjct: 240 APEIVISQHGADPHRADPL 258
>gi|224006361|ref|XP_002292141.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220972660|gb|EED90992.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 299
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 76/155 (49%), Gaps = 19/155 (12%)
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
W+ +V GG HH +D G GFC ++DI++ + +Q I R++IIDLD HQGNG+ K F
Sbjct: 116 WSAHVAGGTHHAFSDYGEGFCIFSDIAVAAN-VLLQNGIRRILIIDLDVHQGNGNAKLFD 174
Query: 212 SDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEAL-EVAGHTFDPE 270
+S V+ M G Y + + D +E+ G Y+ L L + H FD E
Sbjct: 175 GNSDVWTFSMHCQGNY---FSKKETSDLDIELPIGCGDETYISTLSHWLRRIEQHPFDEE 231
Query: 271 --------------LVIYNAGTDILEGDPLGMLKV 291
L+ Y AG DI E D LG L +
Sbjct: 232 EGSEDDTKVKKPFDLIFYQAGVDIHEDDRLGRLSI 266
>gi|423657610|ref|ZP_17632909.1| hypothetical protein IKG_04598 [Bacillus cereus VD200]
gi|401289166|gb|EJR94887.1| hypothetical protein IKG_04598 [Bacillus cereus VD200]
Length = 397
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 109/255 (42%), Gaps = 26/255 (10%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + I+ P A+ E++ VH+E Y+ + L+ S
Sbjct: 29 HPFNQLRVTLTYDLLQKGGFISPSQIISPRTATDEEIAYVHTEEYINAVKRAGEGKLEKS 88
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 89 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 142
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 143 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 201
Query: 224 PGIY---------PRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIY 274
G Y R V + + T +LK ++ F P++++
Sbjct: 202 TGRYLFPGTGAVNERGQGNGYSYSFNVPLDAFTEDESFLKSYRTVVKEVAAYFKPDIILT 261
Query: 275 NAGTDILEGDPLGML 289
G D DPL L
Sbjct: 262 QNGADAHYYDPLTHL 276
>gi|398014802|ref|XP_003860591.1| histone deacetylase, putative [Leishmania donovani]
gi|322498813|emb|CBZ33885.1| histone deacetylase, putative [Leishmania donovani]
Length = 430
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 124/269 (46%), Gaps = 23/269 (8%)
Query: 39 YSPDYDIS-FLGIEKLHPFDSSKWGRICQFLSSEGFLDKNC--IVEPLEASKEDLLVVHS 95
Y+ D +IS F+ + P+ I + L +D +C +V PL E+L+ H+
Sbjct: 30 YASDMNISAFVPQHAMKPYRVLAAMEIVRSLK----IDAHCRTVVPPL-VKVEELMAYHT 84
Query: 96 ESYLKSLQSSPNVSII--IEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKL--AKERG 151
++YL +L S + E V +C ++ GT++ A L + +
Sbjct: 85 DTYLANLGLHSCRSWLWNAETSKVFFSGDCPPVEGLMEHSIATASGTLMGAVLLNSGQVD 144
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A++ GGG HH E GFC DI L I ++ + RV+ +D+D H G+G ++ F
Sbjct: 145 VAVHWGGGMHHSKCGECSGFCYVNDIVLGI-LELLKCH-DRVLYVDIDMHHGDGVDEAFC 202
Query: 212 SDSRVYILDM------FNPGI-YPRD--YEARRFIDQKVEVVSGTTTNEYLKKLDEALEV 262
+ RV+ L + F PG +PRD Y R+ + V G T YL + AL
Sbjct: 203 TSDRVFTLSLHKFGESFFPGTGHPRDVGYGRGRYYSMNLAVWDGITDFYYLGVFEHALHS 262
Query: 263 AGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ P++++ G D L GD LG+L +
Sbjct: 263 IVRRYSPDVIVLQCGADSLAGDRLGLLNL 291
>gi|193527475|gb|ACF19802.1| histone deacetylase [Leishmania donovani]
Length = 430
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 124/269 (46%), Gaps = 23/269 (8%)
Query: 39 YSPDYDIS-FLGIEKLHPFDSSKWGRICQFLSSEGFLDKNC--IVEPLEASKEDLLVVHS 95
Y+ D +IS F+ + P+ I + L +D +C +V PL E+L+ H+
Sbjct: 30 YASDMNISAFVPQHAMKPYRVLAAMEIVRSLK----IDAHCRTVVPPL-VKVEELMAYHT 84
Query: 96 ESYLKSLQSSPNVSII--IEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKL--AKERG 151
++YL +L S + E V +C ++ GT++ A L + +
Sbjct: 85 DTYLANLGLHSCRSWLWNAETSKVFFSGDCPPVEGLMEHSIATASGTLMGAVLLNSGQVD 144
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A++ GGG HH E GFC DI L I ++ + RV+ +D+D H G+G ++ F
Sbjct: 145 VAVHWGGGMHHSKCGECSGFCYVNDIVLGI-LELLKCH-DRVLYVDIDMHHGDGVDEAFC 202
Query: 212 SDSRVYILDM------FNPGI-YPRD--YEARRFIDQKVEVVSGTTTNEYLKKLDEALEV 262
+ RV+ L + F PG +PRD Y R+ + V G T YL + AL
Sbjct: 203 TSDRVFTLSLHKFGESFFPGTGHPRDVGYGRGRYYSMNLAVWDGITDFYYLGVFEHALHS 262
Query: 263 AGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ P++++ G D L GD LG+L +
Sbjct: 263 IVRRYSPDVIVLQCGADSLAGDRLGLLNL 291
>gi|397467175|ref|XP_003805302.1| PREDICTED: histone deacetylase 8 isoform 1 [Pan paniscus]
gi|410214442|gb|JAA04440.1| histone deacetylase 8 [Pan troglodytes]
gi|410255502|gb|JAA15718.1| histone deacetylase 8 [Pan troglodytes]
gi|410293108|gb|JAA25154.1| histone deacetylase 8 [Pan troglodytes]
gi|410330947|gb|JAA34420.1| histone deacetylase 8 [Pan troglodytes]
Length = 415
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 118/271 (43%), Gaps = 25/271 (9%)
Query: 30 IPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKED 89
+P++ IYSP+Y + K+ + + + + + IV+P AS E+
Sbjct: 53 VPVY----IYSPEYVSMCDSLAKI----PKRASMVHSLIEAYALHKQMRIVKPKVASMEE 104
Query: 90 LLVVHSESYLKSLQ--SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLA 147
+ H+++YL+ LQ S + L +C + + + +GG + A
Sbjct: 105 MATFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYDCPATEGI-FDYAAAIGGATITAAQC 163
Query: 148 KERGW---AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
G AIN GG+HH DE GFC D L I ++ R++ +DLD H G+
Sbjct: 164 LIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGI--LRLRRKFERILYVDLDLHHGD 221
Query: 205 GHEKDFSSDSRVYILDM--FNPGIYPRDYEAR-------RFIDQKVEVVSGTTTNEYLKK 255
G E FS S+V + + F+PG +P + R+ V + G +Y +
Sbjct: 222 GVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQI 281
Query: 256 LDEALEVAGHTFDPELVIYNAGTDILEGDPL 286
+ L+ F+P+ V+ G D + GDP+
Sbjct: 282 CESVLKEVYQAFNPKAVVLQLGADTIAGDPM 312
>gi|340780639|pdb|3SFF|A Chain A, Crystal Structure Of Human Hdac8 Inhibitor Complex, An
Amino Acid Derived Inhibitor
gi|340780640|pdb|3SFH|A Chain A, Crystal Structure Of Human Hdac8 Inhibitor Complex, An
Amino Acid Derived Inhibitor
Length = 378
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 118/271 (43%), Gaps = 25/271 (9%)
Query: 30 IPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKED 89
+P++ IYSP+Y + K+ + + + + + IV+P AS E+
Sbjct: 16 VPVY----IYSPEYVSMCDSLAKI----PKRASMVHSLIEAYALHKQMRIVKPKVASMEE 67
Query: 90 LLVVHSESYLKSLQ--SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLA 147
+ H+++YL+ LQ S + L +C + + + +GG + A
Sbjct: 68 MATFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYDCPATEGI-FDYAAAIGGATITAAQC 126
Query: 148 KERGW---AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
G AIN GG+HH DE GFC D L I ++ R++ +DLD H G+
Sbjct: 127 LIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGI--LRLRRKFERILYVDLDLHHGD 184
Query: 205 GHEKDFSSDSRVYILDM--FNPGIYPRDYEAR-------RFIDQKVEVVSGTTTNEYLKK 255
G E FS S+V + + F+PG +P + R+ V + G +Y +
Sbjct: 185 GVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQI 244
Query: 256 LDEALEVAGHTFDPELVIYNAGTDILEGDPL 286
+ L+ F+P+ V+ G D + GDP+
Sbjct: 245 CESVLKEVYQAFNPKAVVLQLGADTIAGDPM 275
>gi|260575873|ref|ZP_05843869.1| histone deacetylase superfamily [Rhodobacter sp. SW2]
gi|259022026|gb|EEW25326.1| histone deacetylase superfamily [Rhodobacter sp. SW2]
Length = 369
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 115/261 (44%), Gaps = 24/261 (9%)
Query: 49 GIEKLHPFDSSKWGRICQFLSSEGFLDKN-CIVEPLEASKEDLLVVHSESYLKSL----- 102
G HP + G + ++ G+ + ++E A + L H+ +YL+++
Sbjct: 15 GYRGNHPLAIPRIGTVEALCAALGWTGPDHPVLESPVADRAFLERFHTPAYLEAMLRAEA 74
Query: 103 --QSSPNVSI-----IIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAIN 155
++SP +E P +FP L QR VGG++LAA LA A +
Sbjct: 75 AGRASPEDQARHNLGTLENP---VFPG-LWQRAA-----TSVGGSVLAADLAHAGAVAYH 125
Query: 156 VGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSR 215
GG HH D GFC + D I + L +RV+ +DLDAH G+G E F++D R
Sbjct: 126 PAGGTHHGMPDRANGFCFFNDPVFAI-LRLLDLGRARVVYVDLDAHHGDGVEAAFAADPR 184
Query: 216 VYILDMFNPGIYPRDYEARRFIDQ-KVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIY 274
V + M G +P + V +G +E+ + + A+ F P+ V+
Sbjct: 185 VRTISMHQAGRWPFTGALSDGGGACNLPVPAGLNDSEFDRLVQAAVLPLARDFRPDAVVV 244
Query: 275 NAGTDILEGDPLGMLKVKWGV 295
G D L+GDPL L + G
Sbjct: 245 TMGADALQGDPLSGLMLSNGA 265
>gi|8923769|ref|NP_060956.1| histone deacetylase 8 isoform 1 [Homo sapiens]
gi|29839394|sp|Q9BY41.2|HDAC8_HUMAN RecName: Full=Histone deacetylase 8; Short=HD8
gi|51247570|pdb|1T64|A Chain A, Crystal Structure Of Human Hdac8 Complexed With
Trichostatin A
gi|51247571|pdb|1T64|B Chain B, Crystal Structure Of Human Hdac8 Complexed With
Trichostatin A
gi|51247572|pdb|1T67|A Chain A, Crystal Structure Of Human Hdac8 Complexed With Ms-344
gi|51247573|pdb|1T69|A Chain A, Crystal Structure Of Human Hdac8 Complexed With Saha
gi|51247944|pdb|1VKG|A Chain A, Crystal Structure Of Human Hdac8 Complexed With Cra-19156
gi|51247945|pdb|1VKG|B Chain B, Crystal Structure Of Human Hdac8 Complexed With Cra-19156
gi|55670525|pdb|1W22|A Chain A, Crystal Structure Of Inhibited Human Hdac8
gi|55670526|pdb|1W22|B Chain B, Crystal Structure Of Inhibited Human Hdac8
gi|7710996|emb|CAB90213.1| histone deacetylase 8 [Homo sapiens]
gi|8118721|gb|AAF73076.1| class I histone deacetylase [Homo sapiens]
gi|261858236|dbj|BAI45640.1| histone deacetylase 8 [synthetic construct]
Length = 377
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 118/271 (43%), Gaps = 25/271 (9%)
Query: 30 IPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKED 89
+P++ IYSP+Y + K+ + + + + + IV+P AS E+
Sbjct: 15 VPVY----IYSPEYVSMCDSLAKI----PKRASMVHSLIEAYALHKQMRIVKPKVASMEE 66
Query: 90 LLVVHSESYLKSLQ--SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLA 147
+ H+++YL+ LQ S + L +C + + + +GG + A
Sbjct: 67 MATFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYDCPATEGI-FDYAAAIGGATITAAQC 125
Query: 148 KERGW---AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
G AIN GG+HH DE GFC D L I ++ R++ +DLD H G+
Sbjct: 126 LIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGI--LRLRRKFERILYVDLDLHHGD 183
Query: 205 GHEKDFSSDSRVYILDM--FNPGIYPRDYEAR-------RFIDQKVEVVSGTTTNEYLKK 255
G E FS S+V + + F+PG +P + R+ V + G +Y +
Sbjct: 184 GVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQI 243
Query: 256 LDEALEVAGHTFDPELVIYNAGTDILEGDPL 286
+ L+ F+P+ V+ G D + GDP+
Sbjct: 244 CESVLKEVYQAFNPKAVVLQLGADTIAGDPM 274
>gi|359396651|ref|ZP_09189702.1| hypothetical protein KUC_3334 [Halomonas boliviensis LC1]
gi|357969329|gb|EHJ91777.1| hypothetical protein KUC_3334 [Halomonas boliviensis LC1]
Length = 313
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 108/260 (41%), Gaps = 29/260 (11%)
Query: 41 PDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLK 100
PD + +G E HP + I LS G L + + EA +E L VH +L+
Sbjct: 9 PDCSLHHMGPE--HPESPQRLEAIRARLSLAGLLQQTMQADAKEACEEALARVHPLRHLR 66
Query: 101 SLQSS-PNVSIIIEVPPVALFPNCL---------VQRKVLYPFRKQVGGTILAAKLAKER 150
SL P I+ + P+ L V R V F++Q A +
Sbjct: 67 SLDKCLPTEGIVTLDSDTMMNPDSLKAARVAAGAVIRGVDQVFKRQADNVFCAVRPPG-- 124
Query: 151 GWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDF 210
HH A + GFC Y +I++ +A + R+ I+D D HQ NG F
Sbjct: 125 ----------HHAEASDAMGFCFYNNIAVGAAHARAKYGAKRIAILDFDVHQCNGTIDIF 174
Query: 211 SSDSRVYILDMFNPGIYPRDY---EARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTF 267
+D V I F YP Y E + I+ +EV GT E+ + ++ A H F
Sbjct: 175 KNDPEVLICTSFQYPFYPWRYLRSEWQNVINTPLEV--GTDGPEFRRIIENHWLPALHAF 232
Query: 268 DPELVIYNAGTDILEGDPLG 287
P+LV+ +AG D DP+G
Sbjct: 233 KPDLVMLSAGFDAHRDDPMG 252
>gi|119592227|gb|EAW71821.1| histone deacetylase 8, isoform CRA_a [Homo sapiens]
Length = 415
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 118/271 (43%), Gaps = 25/271 (9%)
Query: 30 IPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKED 89
+P++ IYSP+Y + K+ + + + + + IV+P AS E+
Sbjct: 53 VPVY----IYSPEYVSMCDSLAKI----PKRASMVHSLIEAYALHKQMRIVKPKVASMEE 104
Query: 90 LLVVHSESYLKSLQ--SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLA 147
+ H+++YL+ LQ S + L +C + + + +GG + A
Sbjct: 105 MATFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYDCPATEGI-FDYAAAIGGATITAAQC 163
Query: 148 KERGW---AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
G AIN GG+HH DE GFC D L I ++ R++ +DLD H G+
Sbjct: 164 LIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGI--LRLRRKFERILYVDLDLHHGD 221
Query: 205 GHEKDFSSDSRVYILDM--FNPGIYPRDYEAR-------RFIDQKVEVVSGTTTNEYLKK 255
G E FS S+V + + F+PG +P + R+ V + G +Y +
Sbjct: 222 GVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQI 281
Query: 256 LDEALEVAGHTFDPELVIYNAGTDILEGDPL 286
+ L+ F+P+ V+ G D + GDP+
Sbjct: 282 CESVLKEVYQAFNPKAVVLQLGADTIAGDPM 312
>gi|403308073|ref|XP_003944503.1| PREDICTED: histone deacetylase 8 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 415
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 118/271 (43%), Gaps = 25/271 (9%)
Query: 30 IPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKED 89
+P++ IYSP+Y + K+ + + + + + +V+P AS E+
Sbjct: 53 VPVY----IYSPEYVSMCDSLAKI----PKRASMVHSLIEAYALHKQMRVVKPKVASMEE 104
Query: 90 LLVVHSESYLKSLQ--SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLA 147
+ H+++YL+ LQ S + L +C + + + VGG + A
Sbjct: 105 MATFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYDCPATEGI-FDYAAAVGGATITAAQC 163
Query: 148 KERGW---AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
G AIN GG+HH DE GFC D L I ++ R++ +DLD H G+
Sbjct: 164 LIDGMSKVAINWSGGWHHAKKDEASGFCYLNDAVLGI--LRLRRKFERILYVDLDLHHGD 221
Query: 205 GHEKDFSSDSRVYILDM--FNPGIYPRDYEAR-------RFIDQKVEVVSGTTTNEYLKK 255
G E FS S+V + + F+PG +P + R+ V + G +Y +
Sbjct: 222 GVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQI 281
Query: 256 LDEALEVAGHTFDPELVIYNAGTDILEGDPL 286
+ L+ F+P+ V+ G D + GDP+
Sbjct: 282 CESVLKEVYQAFNPKAVVLQLGADTIAGDPM 312
>gi|221632213|ref|YP_002521434.1| histone deacetylase family protein [Thermomicrobium roseum DSM
5159]
gi|221156465|gb|ACM05592.1| histone deacetylase family protein [Thermomicrobium roseum DSM
5159]
Length = 319
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 103/249 (41%), Gaps = 18/249 (7%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HP ++ I Q L G LD ++EP A +E + ++H +Y+ L+
Sbjct: 22 HPERPARLEAILQLLERTGRLDNRPVIEPDPADEETIALIHDRAYIVELRE------FAA 75
Query: 114 VPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLA----KERGWAINVGGGFHHCSADEGG 169
L + +V + R VG + A + R +A+ G HH + G
Sbjct: 76 RGGGWLDADTIVSPRSFEVARLAVGAVVQAVESVLSGQARRVFALIRPPG-HHAEPERGM 134
Query: 170 GFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPR 229
GFC + +I++ YA + + R+ IID D H GNG + F RV+ + + +YP
Sbjct: 135 GFCLFNNIAVAAQYALERYGLRRIAIIDWDVHHGNGTQAAFYRTDRVFFVSLHQWPLYPG 194
Query: 230 DYEAR-------RFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILE 282
A R + + G+ YL +E + PELV+ +AG D
Sbjct: 195 TGRAEEIGEGPGRGYTLNIPLAPGSDDQVYLAAFANEIEPRLAAYRPELVMVSAGYDAHY 254
Query: 283 GDPLGMLKV 291
DPL + V
Sbjct: 255 ADPLAAMAV 263
>gi|158431009|pdb|2V5W|A Chain A, Crystal Structure Of Hdac8-Substrate Complex
gi|158431010|pdb|2V5W|B Chain B, Crystal Structure Of Hdac8-Substrate Complex
Length = 388
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 118/271 (43%), Gaps = 25/271 (9%)
Query: 30 IPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKED 89
+P++ IYSP+Y + K+ + + + + + IV+P AS E+
Sbjct: 15 VPVY----IYSPEYVSMCDSLAKI----PKRASMVHSLIEAYALHKQMRIVKPKVASMEE 66
Query: 90 LLVVHSESYLKSLQ--SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLA 147
+ H+++YL+ LQ S + L +C + + + +GG + A
Sbjct: 67 MATFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYDCPATEGI-FDYAAAIGGATITAAQC 125
Query: 148 KERGW---AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
G AIN GG+HH DE GFC D L I ++ R++ +DLD H G+
Sbjct: 126 LIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGI--LRLRRKFERILYVDLDLHHGD 183
Query: 205 GHEKDFSSDSRVYILDM--FNPGIYPRDYEAR-------RFIDQKVEVVSGTTTNEYLKK 255
G E FS S+V + + F+PG +P + R+ V + G +Y +
Sbjct: 184 GVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQI 243
Query: 256 LDEALEVAGHTFDPELVIYNAGTDILEGDPL 286
+ L+ F+P+ V+ G D + GDP+
Sbjct: 244 CESVLKEVYQAFNPKAVVLQLGADTIAGDPM 274
>gi|94969816|ref|YP_591864.1| histone deacetylase superfamily protein [Candidatus Koribacter
versatilis Ellin345]
gi|94551866|gb|ABF41790.1| histone deacetylase superfamily [Candidatus Koribacter versatilis
Ellin345]
Length = 298
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 121/258 (46%), Gaps = 22/258 (8%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
L Y+ Y L + + H F SK+ + + L + + + PL A E + +VH
Sbjct: 5 LFYTDHYT---LPLPEGHRFPISKYKLLREMLERDSLFE--FVPAPL-AKPEVIALVHDA 58
Query: 97 SYLKS-LQSSPNVSIIIEVPPVALFPNC--LVQRKVLYPFRKQVGGTILAAKLAKERGWA 153
+Y++ +Q + + + FP LV+R + VGGT+ A A G+
Sbjct: 59 AYVEQFVQGELSAQAMRRIG----FPWSPELVKRTL-----GSVGGTLSAGMDALSSGFG 109
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSD 213
+ GG HH EG G+C + DI++ I Y + R +IDLD HQG+G + F +D
Sbjct: 110 GTLAGGTHHAFRSEGSGYCVFNDIAIAILYLRSKGLAQRAAVIDLDVHQGDGTAQIFQND 169
Query: 214 SRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVI 273
+ V + + + +P + + ID +E+ T +EYL +D L F PE++
Sbjct: 170 ALVLTISVHSRANFPFRKQVSK-ID--IELEDATHDDEYLNVVDGLLPRVA-DFKPEILF 225
Query: 274 YNAGTDILEGDPLGMLKV 291
Y +G D L D LG L +
Sbjct: 226 YQSGVDGLATDSLGRLAL 243
>gi|377559225|ref|ZP_09788785.1| putative acetoin utilization protein [Gordonia otitidis NBRC
100426]
gi|377523683|dbj|GAB33950.1| putative acetoin utilization protein [Gordonia otitidis NBRC
100426]
Length = 414
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 124/273 (45%), Gaps = 23/273 (8%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
+I+S D+ +S+ HP + + S G LD + PL+ + L VVHS+
Sbjct: 5 VIWSEDF-LSYRWAHT-HPMNPVRLALTMTLAQSLGVLDDVDVSPPLDIGDDALTVVHSQ 62
Query: 97 SYLKSLQSSPNVSIIIEVPPVA-LF----PNCLVQRKVLYPFRKQVGGTILAAKL----A 147
Y+ ++++ + + + P + LF + V + R VGGT+ AA+ A
Sbjct: 63 DYIDAVRAVGSGTASLSGPLLERLFGLGDSDNPVFDGMHEAARLLVGGTLAAAQAVGSGA 122
Query: 148 KERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHE 207
R A+N+GGG HH GFC Y D ++ IH+ ++ R+ ID+DAH G+G +
Sbjct: 123 VRR--AVNIGGGMHHAMRARAAGFCIYNDCAVAIHW-LLENGFDRIAYIDIDAHHGDGVQ 179
Query: 208 KDFSSDSRVYILDMFN------PGI-YPRDY--EARRFIDQKVEVVSGTTTNEYLKKLDE 258
F++D RV + + PG +P + +A V ++ T +L+
Sbjct: 180 VAFAADPRVMTVSLHQHPATLWPGTGWPTEVGDDAAEGSAVNVALMPDTQDRLWLRAFHA 239
Query: 259 ALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ F P+++I G D DPL L +
Sbjct: 240 VVPSLIAEFKPQIIISQCGADSHRADPLTDLSL 272
>gi|407781491|ref|ZP_11128709.1| histone deacetylase [Oceanibaculum indicum P24]
gi|407207708|gb|EKE77639.1| histone deacetylase [Oceanibaculum indicum P24]
Length = 373
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 116/273 (42%), Gaps = 22/273 (8%)
Query: 32 IFKLPLIYSPD-YDISFLGIEKLHPFDSSKWGRICQFLSSEGFLD--KNCIVEPLEASKE 88
+ + P++ D Y S G + HP + + + + G+ D + VEP A++E
Sbjct: 1 MLEKPILLGSDIYRHSIYG--RKHPLSIPRVSLVLDLIRALGWFDEARYRAVEP--ATRE 56
Query: 89 DLLVVHSESYLKSLQSSPNVSIIIEVPP-------VALFPNCLVQRKVLYPFRKQVGGTI 141
L H+ Y+++L + VPP + N + P +I
Sbjct: 57 QLTRFHAPDYVEALMRAEETR---HVPPEDQERYNIGRNGNPVFAEIFRRPA-TSCAASI 112
Query: 142 LAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAH 201
LAA L KE G N GG HH D GFC + D L I AF+ + RV+ IDLDAH
Sbjct: 113 LAAGLLKEGGVVHNPAGGTHHGRPDRASGFCYFNDAVLAI-LAFLDQGLERVLYIDLDAH 171
Query: 202 QGNGHEKDFSSDSRVYILDMFNPGIYPRD---YEARRFIDQKVEVVSGTTTNEYLKKLDE 258
G+G + F + RV + + +PR + + + + V +G E + E
Sbjct: 172 HGDGVQDAFHDEERVLTVSIHEQDRWPRTGALADRAGGMARNIPVPAGFNDTEMAFLVAE 231
Query: 259 ALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
AL F P+ ++ G D LE DP L +
Sbjct: 232 ALLPLADRFRPQALVLQCGCDGLEDDPQSRLSL 264
>gi|434377818|ref|YP_006612462.1| acetoin utilization protein AcuC [Bacillus thuringiensis HD-789]
gi|401876375|gb|AFQ28542.1| acetoin utilization protein AcuC [Bacillus thuringiensis HD-789]
Length = 388
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 109/255 (42%), Gaps = 26/255 (10%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + I+ P A+ E++ VH+E Y+ + L+ S
Sbjct: 20 HPFNQLRVTLTYDLLQKGGFISPSQIISPRMATDEEIAYVHTEEYINAVKRAGEGKLEKS 79
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 80 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 133
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 134 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 192
Query: 224 PGIY---------PRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIY 274
G Y R V + + T +LK ++ F P++++
Sbjct: 193 TGRYLFPGTGAVNERGQGNGYSYSFNVPLDAFTEDESFLKSYRTVVKEVAAYFKPDIILT 252
Query: 275 NAGTDILEGDPLGML 289
G D DPL L
Sbjct: 253 QNGADAHYYDPLTHL 267
>gi|323498238|ref|ZP_08103240.1| histone deacetylase/AcuC/AphA family protein [Vibrio sinaloensis
DSM 21326]
gi|323316666|gb|EGA69675.1| histone deacetylase/AcuC/AphA family protein [Vibrio sinaloensis
DSM 21326]
Length = 307
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 121/271 (44%), Gaps = 34/271 (12%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNC-----IVEPLEASKED 89
+PLIY Y S L + + H + +K+ + + + + D V+P S+++
Sbjct: 2 IPLIYHAIY--SELPLPEGHRYPINKYRLLFEAIEQQRAEDTKWNNTFRYVQPQAVSQQE 59
Query: 90 LLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTI 141
+ VH Y++ L S + P + R++ +P+ +++ GGT
Sbjct: 60 VEQVHCREYIQLLTSG-----TLAAPKM---------RRIGFPWSEELITRTLTSAGGTC 105
Query: 142 LAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAH 201
+ G AI++ GG+HH D G GFC D+ L A + +V+I+D D H
Sbjct: 106 ETVSQCLDYGVAIHLSGGYHHAHYDFGSGFCLVNDLVLAAKRALTLEGVDKVLIVDSDVH 165
Query: 202 QGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARR-FIDQKVEVVSGTTTNEYLKKLDEAL 260
G+G ++ + L +P AR+ D + + T +E+L +
Sbjct: 166 HGDGTATLCEDEASIVTLSFHCEKNFP----ARKPDSDLDIPLARETRDDEFLPTFRSVV 221
Query: 261 EVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
E+A + P+L++Y+AG DI E D LG L V
Sbjct: 222 EMAVNLHQPDLIVYDAGVDIHEDDELGYLNV 252
>gi|269928981|ref|YP_003321302.1| Histone deacetylase [Sphaerobacter thermophilus DSM 20745]
gi|269788338|gb|ACZ40480.1| Histone deacetylase [Sphaerobacter thermophilus DSM 20745]
Length = 375
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 104/252 (41%), Gaps = 27/252 (10%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQS--SPNVSII 111
HP + R L G + +EP A++ED+ H+ +Y++ ++ +
Sbjct: 39 HPSNPRLAQRTKHLLDLAGLSRRMVRIEPYPATEEDVTAYHTPAYVQRVREICAAGGGDT 98
Query: 112 IEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAIN----VGGGFHHCSADE 167
E P A P+ Y G ++AA A G V HH AD
Sbjct: 99 GEGAPAA--PDS-------YEIALLAAGGVMAAVDAVMTGQVRQCLALVRPPGHHAMADR 149
Query: 168 GGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIY 227
G GFC + ++++ H+A + + R++I+D D H GNG + F +D V + + G+Y
Sbjct: 150 GMGFCIFGNVAIAAHHARRRHGVERILIVDWDVHHGNGTQDAFYADPGVLFVSIHQDGLY 209
Query: 228 PRDYEARRFIDQKVEVVSGTTTN----------EYLKKLDEALEVAGHTFDPELVIYNAG 277
P + A D +G T N YL + F PELVI +AG
Sbjct: 210 PPGWGA--VEDTGTGPGAGYTVNIPLPPGSGDAAYLAAFTRVIAPIAARFRPELVIVSAG 267
Query: 278 TDILEGDPLGML 289
D DPLG +
Sbjct: 268 QDASASDPLGRM 279
>gi|219109384|pdb|3F07|A Chain A, Crystal Structure Analysis Of Human Hdac8 Complexed With
Apha In A New Monoclinic Crystal Form
gi|219109385|pdb|3F07|B Chain B, Crystal Structure Analysis Of Human Hdac8 Complexed With
Apha In A New Monoclinic Crystal Form
gi|219109386|pdb|3F07|C Chain C, Crystal Structure Analysis Of Human Hdac8 Complexed With
Apha In A New Monoclinic Crystal Form
gi|219109387|pdb|3F0R|A Chain A, Crystal Structure Analysis Of Human Hdac8 Complexed With
Trichostatin A In A New Monoclinic Crystal Form
gi|219109388|pdb|3F0R|B Chain B, Crystal Structure Analysis Of Human Hdac8 Complexed With
Trichostatin A In A New Monoclinic Crystal Form
gi|219109389|pdb|3F0R|C Chain C, Crystal Structure Analysis Of Human Hdac8 Complexed With
Trichostatin A In A New Monoclinic Crystal Form
Length = 388
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 118/271 (43%), Gaps = 25/271 (9%)
Query: 30 IPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKED 89
+P++ IYSP+Y + K+ + + + + + IV+P AS E+
Sbjct: 15 VPVY----IYSPEYVSMCDSLAKI----PKRASMVHSLIEAYALHKQMRIVKPKVASMEE 66
Query: 90 LLVVHSESYLKSLQ--SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLA 147
+ H+++YL+ LQ S + L +C + + + +GG + A
Sbjct: 67 MATFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYDCPATEGI-FDYAAAIGGATITAAQC 125
Query: 148 KERGW---AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
G AIN GG+HH DE GFC D L I ++ R++ +DLD H G+
Sbjct: 126 LIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGI--LRLRRKFERILYVDLDLHHGD 183
Query: 205 GHEKDFSSDSRVYILDM--FNPGIYPRDYEAR-------RFIDQKVEVVSGTTTNEYLKK 255
G E FS S+V + + F+PG +P + R+ V + G +Y +
Sbjct: 184 GVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQI 243
Query: 256 LDEALEVAGHTFDPELVIYNAGTDILEGDPL 286
+ L+ F+P+ V+ G D + GDP+
Sbjct: 244 CESVLKEVYQAFNPKAVVLQLGADTIAGDPM 274
>gi|443673298|ref|ZP_21138366.1| Acetoin dehydrogenase [Rhodococcus sp. AW25M09]
gi|443414113|emb|CCQ16704.1| Acetoin dehydrogenase [Rhodococcus sp. AW25M09]
Length = 422
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 115/261 (44%), Gaps = 32/261 (12%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HP + ++ + G L+ +VEP A +LL H+ +Y+++++ +P +
Sbjct: 35 HPMNPTRLDLTMALATEIGVLEGVELVEPAAAPDSELLRFHTPAYIEAVKRAPAQGPALR 94
Query: 114 VP------------PVALFPNCLVQRKVLYPFRKQVGGTILAAK-LAKERGW-AINVGGG 159
P PV FP+ +L GG++ AA+ +A R A+++GGG
Sbjct: 95 DPDDVVHGLGSDDNPV--FPHMHEASAML------AGGSLAAAREIASGRARRAVSIGGG 146
Query: 160 FHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYIL 219
HH AD GFC Y D ++ I + + R+ ID+DAH G+G + F D RV +
Sbjct: 147 MHHAMADWASGFCVYNDAAIAISW-LLDNGFDRIAYIDVDAHHGDGVQAAFLGDPRVLTV 205
Query: 220 DMF-NPG-IYPR-------DYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPE 270
+ +P ++P E V ++ GT +L+ + A F P+
Sbjct: 206 SLHQHPATLWPNTGWSSEVGTEGGEGTSINVPLLPGTADRLWLRAFHAIVPGAIEAFAPQ 265
Query: 271 LVIYNAGTDILEGDPLGMLKV 291
+++ G D DPL L +
Sbjct: 266 IIVSQCGVDSHREDPLADLAL 286
>gi|218899820|ref|YP_002448231.1| acetoin utilization protein AcuC [Bacillus cereus G9842]
gi|218541257|gb|ACK93651.1| acetoin utilization protein AcuC [Bacillus cereus G9842]
Length = 388
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 109/255 (42%), Gaps = 26/255 (10%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + I+ P A+ E++ VH+E Y+ + L+ S
Sbjct: 20 HPFNQLRVTLTYDLLQKGGFISPSQIISPRMATDEEIAYVHTEEYINAVKRAGEGKLEKS 79
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 80 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 133
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 134 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 192
Query: 224 PGIY---------PRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIY 274
G Y R V + + T +LK ++ F P++++
Sbjct: 193 TGRYLFPGTGAVNERGQGNGYSYSFNVPLDAFTEDESFLKSYRTVVKEVAAYFKPDIILT 252
Query: 275 NAGTDILEGDPLGML 289
G D DPL L
Sbjct: 253 QNGADAHYYDPLTHL 267
>gi|218235910|ref|YP_002369464.1| acetoin utilization protein AcuC [Bacillus cereus B4264]
gi|218163867|gb|ACK63859.1| acetoin utilization protein AcuC [Bacillus cereus B4264]
Length = 388
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 109/255 (42%), Gaps = 26/255 (10%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + I+ P A+ E++ VH+E Y+ + L+ S
Sbjct: 20 HPFNQLRVTLTYDLLQKGGFISPSQIISPRMATDEEIAYVHTEEYINAVKRAGEGKLEKS 79
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 80 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 133
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 134 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 192
Query: 224 PGIY---------PRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIY 274
G Y R V + + T +LK ++ F P++++
Sbjct: 193 TGRYLFPGTGAVNERGQGNGYSYSFNVPLDAFTEDESFLKSYRTVVKEVAAYFKPDIILT 252
Query: 275 NAGTDILEGDPLGML 289
G D DPL L
Sbjct: 253 QNGADAHYYDPLTHL 267
>gi|138896351|ref|YP_001126804.1| acetoin utilization protein AcuC [Geobacillus thermodenitrificans
NG80-2]
gi|196249977|ref|ZP_03148672.1| histone deacetylase superfamily [Geobacillus sp. G11MC16]
gi|134267864|gb|ABO68059.1| Acetoin utilization protein AcuC [Geobacillus thermodenitrificans
NG80-2]
gi|196210491|gb|EDY05255.1| histone deacetylase superfamily [Geobacillus sp. G11MC16]
Length = 389
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 111/259 (42%), Gaps = 30/259 (11%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSS-------- 105
HPF+ + L + G LD +V P A+ E+L ++H +Y+++++++
Sbjct: 22 HPFNQLRVKLTYDLLRTIGALDDRHVVPPRMATDEELTLIHDRAYIEAVKAAGRGELSET 81
Query: 106 --PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK--LAKERGWAINVGGGFH 161
N + E P+ FPN +L VG T+ A L+ + A+N+GGG H
Sbjct: 82 AAANYGLGTEDTPI--FPNMHEASALL------VGSTLTAVDYVLSGQADHALNLGGGLH 133
Query: 162 HCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDM 221
H + GFC Y D ++ I Y + + RV+ +D DAH G+G + F D V +
Sbjct: 134 HGFRGKASGFCVYNDSAVAIQYIREKYGL-RVLYVDTDAHHGDGVQWAFYDDPNVCTFSI 192
Query: 222 FNPGIY---------PRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELV 272
G Y R + A + V + T +L AL F P+++
Sbjct: 193 HETGRYLFPGTGNVNERGHGAGYGYSFNIPVDAFTEDESWLYAYTMALREIADFFRPDVI 252
Query: 273 IYNAGTDILEGDPLGMLKV 291
+ G D DPL L V
Sbjct: 253 VTQNGVDAHYYDPLTHLSV 271
>gi|299689318|pdb|3MZ3|A Chain A, Crystal Structure Of Co2+ Hdac8 Complexed With M344
gi|299689319|pdb|3MZ3|B Chain B, Crystal Structure Of Co2+ Hdac8 Complexed With M344
gi|344189697|pdb|3RQD|A Chain A, Ideal Thiolate-Zinc Coordination Geometry In Depsipeptide
Binding To Histone Deacetylase 8
gi|344189698|pdb|3RQD|B Chain B, Ideal Thiolate-Zinc Coordination Geometry In Depsipeptide
Binding To Histone Deacetylase 8
Length = 389
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 118/271 (43%), Gaps = 25/271 (9%)
Query: 30 IPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKED 89
+P++ IYSP+Y + K+ + + + + + IV+P AS E+
Sbjct: 15 VPVY----IYSPEYVSMCDSLAKI----PKRASMVHSLIEAYALHKQMRIVKPKVASMEE 66
Query: 90 LLVVHSESYLKSLQ--SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLA 147
+ H+++YL+ LQ S + L +C + + + +GG + A
Sbjct: 67 MATFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYDCPATEGI-FDYAAAIGGATITAAQC 125
Query: 148 KERGW---AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
G AIN GG+HH DE GFC D L I ++ R++ +DLD H G+
Sbjct: 126 LIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGI--LRLRRKFERILYVDLDLHHGD 183
Query: 205 GHEKDFSSDSRVYILDM--FNPGIYPRDYEAR-------RFIDQKVEVVSGTTTNEYLKK 255
G E FS S+V + + F+PG +P + R+ V + G +Y +
Sbjct: 184 GVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQI 243
Query: 256 LDEALEVAGHTFDPELVIYNAGTDILEGDPL 286
+ L+ F+P+ V+ G D + GDP+
Sbjct: 244 CESVLKEVYQAFNPKAVVLQLGADTIAGDPM 274
>gi|389584267|dbj|GAB67000.1| histone deacetylase, partial [Plasmodium cynomolgi strain B]
Length = 393
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 122/258 (47%), Gaps = 13/258 (5%)
Query: 36 PLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASK--EDLLVV 93
P ++ P Y S EK H F K+ +I L G + + + S+ L +
Sbjct: 100 PYVFHPIYS-SVPMKEKYHRFKIKKYEKIFSRLIEGGIYNSDYSIPSCNISEMITPLFSI 158
Query: 94 HSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWA 153
H E +++ + S + +E + L+P + + F ++ GTIL++ LA +
Sbjct: 159 HDEGFIEEIFSIVINNEQVEKYELTLYPYLVCR------FLIEINGTILSSLLAMKHFMC 212
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSD 213
+++GGG HH + G GFC + D+++ +H+ I + +I+D+D HQG+G + F +
Sbjct: 213 MHIGGGNHHSKKNRGDGFCIFNDVAIAVHFLLSHGLIDKAIILDVDVHQGDGTAEIFRNC 272
Query: 214 SRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVI 273
+ V + + +P +A ID VE S T +YL+ + L+ + ++
Sbjct: 273 ANVKTISLHCRDNFP-PVKANSTID--VEFDSFATDADYLEAYKKVLDDIAAEQNC-IIF 328
Query: 274 YNAGTDILEGDPLGMLKV 291
Y +G DI D LG L V
Sbjct: 329 YLSGVDISADDDLGFLSV 346
>gi|334347059|ref|XP_003341883.1| PREDICTED: histone deacetylase 8-like [Monodelphis domestica]
Length = 379
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 116/262 (44%), Gaps = 19/262 (7%)
Query: 38 IYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSES 97
IYSP+Y + + K+ + + + + L + +V+P AS E++ H+++
Sbjct: 21 IYSPEYVRTCDSLAKV----PKRASMVHSLIEAYELLKEMRVVKPKVASMEEMASFHTDA 76
Query: 98 YLKSLQ--SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK--LAKERGWA 153
YL+ LQ S + L +C + GGTI AA+ + A
Sbjct: 77 YLQHLQKVSEEGDDEHPDSVEFGLGYDCPSTEGIFDYAAAVGGGTITAAQCLIDGTCNIA 136
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSD 213
IN GG+HH DE GFC D L I + ++ R++ +DLD H G+G E FS
Sbjct: 137 INWAGGWHHAKKDEASGFCYLNDAVLGILH--LRRKFDRILYVDLDLHHGDGVEDAFSFT 194
Query: 214 SRVYILDM--FNPGIYPRDYEAR-------RFIDQKVEVVSGTTTNEYLKKLDEALEVAG 264
S+V + + F+PG +P + R+ V + G +Y + L+
Sbjct: 195 SKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIRDEKYYQICRSVLKEVY 254
Query: 265 HTFDPELVIYNAGTDILEGDPL 286
F+P+ V+ G D + GDP+
Sbjct: 255 AAFNPKAVVLQLGADTIAGDPM 276
>gi|339007493|ref|ZP_08640068.1| acetoin utilization protein AcuC [Brevibacillus laterosporus LMG
15441]
gi|338776702|gb|EGP36230.1| acetoin utilization protein AcuC [Brevibacillus laterosporus LMG
15441]
Length = 384
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 114/272 (41%), Gaps = 28/272 (10%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
LIYS DY F E HPF+ + + + G L I+ P A+ E+LL+VH
Sbjct: 7 LIYSADYTKYFFHEE--HPFNQKRLLLTYDLMQAYGLLTPENIIAPRYATDEELLLVHDP 64
Query: 97 SYL---KSLQSSPN-----VSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAK 148
S+L K + P S + V +F N ++ VGG+I A +
Sbjct: 65 SFLEIVKRQGTQPEELPLAASYGLGTEDVPIFANMHEATSLI------VGGSISAVDIVM 118
Query: 149 --ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
+ + N GG HH GFC Y D S+ I Y + +RV+ ID DAH G+G
Sbjct: 119 NGQAEHSFNPAGGLHHAFRGRASGFCIYNDCSVAIAYIRKHWD-ARVLYIDTDAHHGDGV 177
Query: 207 EKDFSSDSRVYILDMFNPG--IYPRDYEARRFIDQK-------VEVVSGTTTNEYLKKLD 257
+ F D V + + G ++P D + V + + T + +L+ +
Sbjct: 178 QWAFYDDPNVMTISLHETGKYLFPGTGNVTERGDGQGFGYCVNVPLDAFTEDDSFLEIYE 237
Query: 258 EALEVAGHTFDPELVIYNAGTDILEGDPLGML 289
L H F P+++I G D DPL L
Sbjct: 238 SLLPRIAHGFQPDIIITQNGCDAHNYDPLTHL 269
>gi|333919422|ref|YP_004493003.1| putative acetoin utilization protein [Amycolicicoccus subflavus
DQS3-9A1]
gi|333481643|gb|AEF40203.1| Putative acetoin utilization protein [Amycolicicoccus subflavus
DQS3-9A1]
Length = 418
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 121/276 (43%), Gaps = 21/276 (7%)
Query: 36 PLIYSPDYDISFLG--IEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
P+ YS + FL + + HP + + S G L ++ I+ P +S+++LL V
Sbjct: 7 PVPYSVIWTPEFLSYRLSESHPMNPLRLELTIDLAESLGILAESEIIRPDRSSEQELLRV 66
Query: 94 HSESYLKSLQ--SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVG----GTILAAKLA 147
H+ +YL ++Q S+P+ E + L ++P G G LAA
Sbjct: 67 HTPAYLAAVQKVSAPDSGTHRENRLIGLAHGLGNDDNPVFPAMHDAGMIVAGGTLAAAHQ 126
Query: 148 KERGWA---INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
G A +++ GG HH + GFC Y D ++ I + + +R+ ID+D H G+
Sbjct: 127 IHSGLARRVVSIAGGMHHAMPNYAAGFCIYNDCAIAISW-LLDHGYTRIAYIDVDVHHGD 185
Query: 205 GHEKDFSSDSRVYILDMFN------PGI-YPRDY--EARRFIDQKVEVVSGTTTNEYLKK 255
G + F D RV + + PG +P + A V ++ GT + +L+
Sbjct: 186 GVQHAFYDDPRVMTISLHQHPATLWPGTGWPAELGDGAAEGTSINVPMLPGTPDSLWLRA 245
Query: 256 LDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ A F+P++++ G D DPL L +
Sbjct: 246 FHAIVPGAIRAFEPQIIVSQCGADTHREDPLADLAL 281
>gi|338999541|ref|ZP_08638184.1| histone deacetylase superfamily protein [Halomonas sp. TD01]
gi|338763690|gb|EGP18679.1| histone deacetylase superfamily protein [Halomonas sp. TD01]
Length = 313
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 108/260 (41%), Gaps = 29/260 (11%)
Query: 41 PDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLK 100
PD + +G E HP + I LS G L + + EA E L VH +L
Sbjct: 9 PDCALHHMGPE--HPESPQRLEAIRARLSLAGLLQQTMQADAKEACNEALARVHPTRHLN 66
Query: 101 SLQSS-PNVSIIIEVPPVALFPNCL---------VQRKVLYPFRKQVGGTILAAKLAKER 150
+L+ P I+ + P+ L V R V F++Q A +
Sbjct: 67 ALEKCLPKEGIVTLDSDTMMNPDSLKAARVAAGAVIRGVDQVFKRQADNVFCAVRPPG-- 124
Query: 151 GWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDF 210
HH A + GFC Y +I++ +A + R+ I+D D HQ NG F
Sbjct: 125 ----------HHAEAADAMGFCFYNNIAVGAAHAKAKYGARRIAILDFDVHQCNGTIDIF 174
Query: 211 SSDSRVYILDMFNPGIYPRDY---EARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTF 267
+D V + F YP Y E + ++ +EV GT + E+ + ++ A H F
Sbjct: 175 KNDPEVLVCTSFQYPFYPWRYLRSEWQNVVNTPLEV--GTDSTEFRRIIERQWLPALHAF 232
Query: 268 DPELVIYNAGTDILEGDPLG 287
P+LV+ +AG D DP+G
Sbjct: 233 KPDLVMLSAGFDAHRDDPMG 252
>gi|423484238|ref|ZP_17460928.1| hypothetical protein IEQ_04016 [Bacillus cereus BAG6X1-2]
gi|401139264|gb|EJQ46827.1| hypothetical protein IEQ_04016 [Bacillus cereus BAG6X1-2]
Length = 397
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 110/255 (43%), Gaps = 26/255 (10%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + ++ P A+ E++ +H+E Y+ + L+ S
Sbjct: 29 HPFNQLRVTLTYDLLQKSGFISPSQVISPRMATDEEIAYIHTEEYINAVKLAGEGKLEKS 88
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 89 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 142
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 143 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 201
Query: 224 PGIY---------PRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIY 274
G Y R V + + T +L+ ++ A F P++++
Sbjct: 202 TGRYLFPGTGAVNERGQGNGYSYSFNVPLDAFTEDESFLESYRTVVKEAAAYFKPDIILT 261
Query: 275 NAGTDILEGDPLGML 289
G D DPL L
Sbjct: 262 QNGADAHYYDPLTHL 276
>gi|423650564|ref|ZP_17626134.1| hypothetical protein IKA_04351 [Bacillus cereus VD169]
gi|401281723|gb|EJR87629.1| hypothetical protein IKA_04351 [Bacillus cereus VD169]
Length = 397
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 109/255 (42%), Gaps = 26/255 (10%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + I+ P A+ E++ VH+E Y+ + L+ S
Sbjct: 29 HPFNQLRVTLTYDLLQKGGFISPSQIISPRMATDEEIAYVHTEEYINAVKRAGEGKLEKS 88
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 89 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 142
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 143 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 201
Query: 224 PGIY---------PRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIY 274
G Y R V + + T +LK ++ F P++++
Sbjct: 202 TGRYLFPGTGAVNERGQGNGYSYSFNVPLDAFTEDESFLKSYRTVVKEVAAYFKPDIILT 261
Query: 275 NAGTDILEGDPLGML 289
G D DPL L
Sbjct: 262 QNGADAHYYDPLTHL 276
>gi|423358245|ref|ZP_17335748.1| hypothetical protein IC1_00225 [Bacillus cereus VD022]
gi|423560825|ref|ZP_17537101.1| hypothetical protein II5_00229 [Bacillus cereus MSX-A1]
gi|401085932|gb|EJP94164.1| hypothetical protein IC1_00225 [Bacillus cereus VD022]
gi|401202670|gb|EJR09520.1| hypothetical protein II5_00229 [Bacillus cereus MSX-A1]
Length = 397
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 109/255 (42%), Gaps = 26/255 (10%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + I+ P A+ E++ VH+E Y+ + L+ S
Sbjct: 29 HPFNQLRVTLTYDLLQKGGFISPSQIISPRMATDEEIAYVHTEEYINAVKRAGEGKLEKS 88
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 89 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 142
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 143 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 201
Query: 224 PGIY---------PRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIY 274
G Y R V + + T +LK ++ F P++++
Sbjct: 202 TGRYLFPGTGAVNERGQGNGYSYSFNVPLDAFTEDESFLKSYRTVVKEVAAYFKPDIILT 261
Query: 275 NAGTDILEGDPLGML 289
G D DPL L
Sbjct: 262 QNGADAHYYDPLTHL 276
>gi|421873504|ref|ZP_16305117.1| acetoin utilization protein AcuC [Brevibacillus laterosporus GI-9]
gi|372457566|emb|CCF14666.1| acetoin utilization protein AcuC [Brevibacillus laterosporus GI-9]
Length = 395
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 113/272 (41%), Gaps = 28/272 (10%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
LIYS DY F E HPF+ + + + G L I+ P A+ E+LL+VH
Sbjct: 18 LIYSADYTKYFFHEE--HPFNQKRLLLTYDLMQAYGLLTPENIIAPRYATDEELLLVHDP 75
Query: 97 SYL---KSLQSSPN-----VSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAK 148
YL K + P S + V +F N ++ VGG+I A +
Sbjct: 76 RYLEIVKRQGTQPEELPLAASYGLGTEDVPIFANMHEATSLI------VGGSISAVDIVM 129
Query: 149 --ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
+ + N GG HH GFC Y D S+ I Y + +RV+ ID DAH G+G
Sbjct: 130 NGQAEHSFNPAGGLHHAFRGRASGFCIYNDCSVAIAYIRKHWD-ARVLYIDTDAHHGDGV 188
Query: 207 EKDFSSDSRVYILDMFNPG--IYPRDYEARRFIDQK-------VEVVSGTTTNEYLKKLD 257
+ F D V + + G ++P D + V + + T + +L+ +
Sbjct: 189 QWAFYDDPNVMTISLHETGKYLFPGTGNVTERGDGQGFGYCVNVPLDAFTEDDSFLEIYE 248
Query: 258 EALEVAGHTFDPELVIYNAGTDILEGDPLGML 289
L H F P+++I G D DPL L
Sbjct: 249 SLLPRIAHGFQPDIIITQNGCDAHNYDPLTHL 280
>gi|409122167|ref|ZP_11221562.1| histone deacetylase [Gillisia sp. CBA3202]
Length = 325
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 111/267 (41%), Gaps = 38/267 (14%)
Query: 31 PIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDL 90
PIFK PL + H F K+ + + L EG + EP ++
Sbjct: 8 PIFKHPL-------------PEGHRFPMEKYELLPKQLLHEGTCTRENFFEPELPKISNV 54
Query: 91 LVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTIL 142
L VHS+ Y+ L + L + RK+ +P +++ GT+
Sbjct: 55 LAVHSQDYVADL--------------LELTVDKRAARKIGFPLSEELIQRELIIAHGTMK 100
Query: 143 AAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQ 202
A A G ++N+ GG HH G FC D ++ Y + I +++I+DLD HQ
Sbjct: 101 ACDHALNYGISMNIAGGTHHAYTSHGEAFCLLNDQAIAARYLQKKKGIKKILIVDLDVHQ 160
Query: 203 GNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEV 262
GNG + F D+ V+ + Y E D +E+V T +YL+ L L
Sbjct: 161 GNGTAEIFREDASVFTFSIHGKNNYSFRKETS---DLDIELVDQTGDKDYLEVLKNTLPE 217
Query: 263 AGHTFDPELVIYNAGTDILEGDPLGML 289
+ P+ + Y +G DIL D LG L
Sbjct: 218 LINKVKPDFIFYLSGVDILATDKLGKL 244
>gi|395527496|ref|XP_003765880.1| PREDICTED: histone deacetylase 8-like [Sarcophilus harrisii]
Length = 379
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 120/263 (45%), Gaps = 21/263 (7%)
Query: 38 IYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSES 97
IYSP+Y + + K+ + + + + L + +V+P AS E++ H+++
Sbjct: 21 IYSPEYVRTCDSLAKV----PKRASMVHSLIEAYELLKEMRVVKPKVASMEEMASFHTDA 76
Query: 98 YLKSLQ--SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGG-TILAAK--LAKERGW 152
YL+ LQ S + L +C + + + VGG TI AA+ + +
Sbjct: 77 YLQHLQKVSEEGDDEHPDSVEFGLGYDCPSTEGI-FDYAAAVGGATITAAQCLIDGKCNI 135
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
AIN GG+HH DE GFC D L I + ++ R++ IDLD H G+G E FS
Sbjct: 136 AINWAGGWHHAKKDEASGFCYLNDAVLGILH--LRRKFDRILYIDLDLHHGDGVEDAFSF 193
Query: 213 DSRVYILDM--FNPGIYPRDYEAR-------RFIDQKVEVVSGTTTNEYLKKLDEALEVA 263
S+V + + F+PG +P + R+ V + G +Y + L+
Sbjct: 194 TSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIRDEKYYQVCKSVLKEV 253
Query: 264 GHTFDPELVIYNAGTDILEGDPL 286
F+P+ V+ G D + GDP+
Sbjct: 254 YVAFNPKAVVLQLGADTIAGDPM 276
>gi|340056778|emb|CCC51116.1| putative histone deacetylase [Trypanosoma vivax Y486]
Length = 388
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 113/267 (42%), Gaps = 20/267 (7%)
Query: 44 DISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQ 103
D +F + H + + +++ G V P EDLL H+E Y+ +L
Sbjct: 21 DCTFSALVPQHAMKPYRLLATMELITTLGLRRYCRTVVPPPIRIEDLLAYHAEDYILNLG 80
Query: 104 SSPNVSII--IEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKL--AKERGWAINVGGG 159
+ S + EV V+ +C ++ G+++AA L + + AI+ GGG
Sbjct: 81 LHNSRSWLWNTEVSKVSFSGDCPPVEGIVEHSLSIASGSLMAAVLLNSGKADIAIHWGGG 140
Query: 160 FHHCSADEGGGFCAYADISLCIHYAFVQL--NISRVMIIDLDAHQGNGHEKDFSSDSRVY 217
HH E GFC DI L A ++L RV+ IDLD H G+G ++ F RV+
Sbjct: 141 MHHAKCGECSGFCYVNDIVL----AIIELLKCFGRVLYIDLDMHHGDGVDEAFCESERVF 196
Query: 218 ILDM------FNPGI-YPRDYEA--RRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFD 268
L + F PG +PRD R + + G Y + AL F
Sbjct: 197 TLSLHKFGESFFPGTGHPRDIGVGKGRHFTMNLAIWDGVDDFFYTTIFERALSSIASRFV 256
Query: 269 PELVIYNAGTDILEGDPLGMLKV-KWG 294
PE+V+ G D L GD LG + WG
Sbjct: 257 PEVVVLQCGADSLAGDRLGHFNLSSWG 283
>gi|148682174|gb|EDL14121.1| histone deacetylase 8, isoform CRA_b [Mus musculus]
Length = 405
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 100/221 (45%), Gaps = 15/221 (6%)
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQ--SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQ 136
IV+P AS E++ H+++YL+ LQ S + L +C +
Sbjct: 84 IVKPKVASMEEMATFHTDAYLQHLQKVSQEGDEDHPDSIEYGLGYDCPATEGIFDYAAAI 143
Query: 137 VGGTILAAK--LAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVM 194
GGTI AA+ + + AIN GG+HH DE GFC D L I ++ R++
Sbjct: 144 GGGTITAAQCLIDGKCKVAINWSGGWHHAKKDEASGFCYLNDAVLGI--LRLRRKFDRIL 201
Query: 195 IIDLDAHQGNGHEKDFSSDSRVYILDM--FNPGIYPRDYEAR-------RFIDQKVEVVS 245
+DLD H G+G E FS S+V + + F+PG +P + R+ V +
Sbjct: 202 YVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDMSDVGLGKGRYYSVNVPIQD 261
Query: 246 GTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPL 286
G +Y + L+ F+P+ V+ G D + GDP+
Sbjct: 262 GIQDEKYYHICESVLKEVYQAFNPKAVVLQLGADTIAGDPM 302
>gi|30046561|gb|AAH50433.1| Histone deacetylase 8 [Homo sapiens]
gi|190692073|gb|ACE87811.1| histone deacetylase 8 protein [synthetic construct]
gi|254071505|gb|ACT64512.1| histone deacetylase 8 protein [synthetic construct]
Length = 377
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 119/271 (43%), Gaps = 25/271 (9%)
Query: 30 IPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKED 89
+P++ IYSP+Y +S P +S + + + + IV+P AS E+
Sbjct: 15 VPVY----IYSPEY-VSMCDSPAKIPKRAS---MVHSLIEAYALHKQMRIVKPKVASMEE 66
Query: 90 LLVVHSESYLKSLQ--SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLA 147
+ H+++YL+ LQ S + L +C + + + +GG + A
Sbjct: 67 MATFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYDCPATEGI-FDYAAAIGGATITAAQC 125
Query: 148 KERGW---AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
G AIN GG+HH DE GFC D L I ++ R++ +DLD H G+
Sbjct: 126 LIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGI--LRLRRKFERILYVDLDLHHGD 183
Query: 205 GHEKDFSSDSRVYILDM--FNPGIYPRDYEAR-------RFIDQKVEVVSGTTTNEYLKK 255
G E FS S+V + + F+PG +P + R+ V + G +Y +
Sbjct: 184 GVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQI 243
Query: 256 LDEALEVAGHTFDPELVIYNAGTDILEGDPL 286
+ L+ F+P+ V+ G D + GDP+
Sbjct: 244 CESVLKEVYQAFNPKAVVLQLGADTIAGDPM 274
>gi|27366395|ref|NP_761923.1| Histone deacetylase/AcuC/AphA family protein [Vibrio vulnificus
CMCP6]
gi|27362596|gb|AAO11450.1| Histone deacetylase/AcuC/AphA family protein [Vibrio vulnificus
CMCP6]
Length = 312
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 119/274 (43%), Gaps = 34/274 (12%)
Query: 32 IFKLPLIYSPDYDISFLGIEKLHPFDSSKWGR----ICQFLSSE-GFLDKNCIVEPLEAS 86
+ +PLIY P Y S L + + H + K+ +C++ + +P S
Sbjct: 1 MMSIPLIYHPIY--SQLPLPEGHRYPIMKYHHLYQAVCRYQQQHLEWQQAFAFYQPEALS 58
Query: 87 KEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------G 138
E + VH + Y+ L + L P + R++ +P+ +++
Sbjct: 59 IEAIKQVHQQEYVDLLTT-------------GLLPAAKM-RRIGFPWSEKLIERTLTSTA 104
Query: 139 GTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDL 198
GT+L A+ A + G AI++ GG+HH D G GFC + D+ + H A ++ +V+IID
Sbjct: 105 GTVLTAEKALQHGVAIHLSGGYHHAHFDYGSGFCLFNDLVMAAHKALEHGSVDKVLIIDS 164
Query: 199 DAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARR-FIDQKVEVVSGTTTNEYLKKLD 257
D H G+G + L +P AR+ D + + +L
Sbjct: 165 DVHHGDGTATLCQRRDDIVTLSFHCDKNFP----ARKPDSDLDIGLPRECGDEAFLAAFK 220
Query: 258 EALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
E + +A P+L+IY+AG DI D LG L V
Sbjct: 221 EVVPMAIRLHQPDLIIYDAGVDIHHEDELGYLNV 254
>gi|15896999|ref|NP_341604.1| acetylpolyamine aminohydrolase [Sulfolobus solfataricus P2]
gi|284173848|ref|ZP_06387817.1| acetylpolyamine aminohydrolase [Sulfolobus solfataricus 98/2]
gi|384433499|ref|YP_005642857.1| histone deacetylase [Sulfolobus solfataricus 98/2]
gi|13813158|gb|AAK40394.1| Acetylpolyamine aminohydrolase [Sulfolobus solfataricus P2]
gi|261601653|gb|ACX91256.1| Histone deacetylase [Sulfolobus solfataricus 98/2]
Length = 351
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 110/250 (44%), Gaps = 20/250 (8%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQ-SSPNVSIII 112
HPF S + + L G +VEP +E L +VHS+ Y++ ++ S +
Sbjct: 21 HPFKSLRESMTKRLLEERGAFHFITLVEPKSIPEEALQLVHSKEYIEFVKYKSKEGQGYL 80
Query: 113 EVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAK--ERGWAINVGGGFHHCSADEGGG 170
+ F + +V G++ A +L K E IN+GGGFHH + G
Sbjct: 81 DDGDTPAFKGIYEAALI------RVSGSVKALELIKSGEFNHTINIGGGFHHAKRNRAAG 134
Query: 171 FCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVY--ILDMFNPGIYP 228
FC + D++L + SR+ I+D+D H +G ++ D+ + L MF+P +P
Sbjct: 135 FCVFNDVALISKLG--ESFFSRIAIVDIDGHHADGTQELLIDDNNILKISLHMFHPNFFP 192
Query: 229 RDYEARRFIDQKVEVVS-------GTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDIL 281
+ K E + GT + YL DE + A + PEL+I AG D
Sbjct: 193 GTGDVNEIGLGKGEGYTINIPLPPGTGDDGYLLAFDEIVVPAIERYKPELIILVAGGDSH 252
Query: 282 EGDPLGMLKV 291
DPL LK+
Sbjct: 253 FNDPLVELKL 262
>gi|440712560|ref|ZP_20893176.1| histone deacetylase/AcuC/AphA family protein [Rhodopirellula
baltica SWK14]
gi|436442715|gb|ELP35826.1| histone deacetylase/AcuC/AphA family protein [Rhodopirellula
baltica SWK14]
Length = 285
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 106/231 (45%), Gaps = 16/231 (6%)
Query: 66 QFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLV 125
+ + SE D IV P A+ E LL H+ Y++ +QS E+ + FP
Sbjct: 10 RVVESEHHRDDTLIV-PQAATDEQLLHCHTPDYVRRVQSGTLTKQ--EIRRIG-FP---W 62
Query: 126 QRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAF 185
K++ R+ G TI AA+ A + G + N+ GG HH A EG G+C + D ++ I
Sbjct: 63 SAKMVERSRRSTGATISAARAALDEGISANLAGGTHHAFAGEGEGYCVFNDAAVAIRTLQ 122
Query: 186 VQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRF-IDQKVEVV 244
+ I R IIDLD HQGNG V+ + +P R+ D V +
Sbjct: 123 SEGLIQRAAIIDLDVHQGNGTASILKDVPSVFTCSVHGVKNFP----LRKMPSDLDVSLP 178
Query: 245 SGTTTNEYLKKLDEAL-EVAGHTFDP---ELVIYNAGTDILEGDPLGMLKV 291
GT ++Y L L ++ H + +LVIY AG D + D LG L +
Sbjct: 179 DGTGDDDYCDALRSVLAKLKKHQSESGQFDLVIYLAGADPYKNDRLGRLSL 229
>gi|158431014|pdb|2V5X|A Chain A, Crystal Structure Of Hdac8-Inhibitor Complex
gi|158431015|pdb|2V5X|B Chain B, Crystal Structure Of Hdac8-Inhibitor Complex
Length = 388
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 118/271 (43%), Gaps = 25/271 (9%)
Query: 30 IPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKED 89
+P++ IYSP+Y + K+ + + + + + IV+P AS E+
Sbjct: 15 VPVY----IYSPEYVSMCDSLAKI----PKRADMVHSLIEAYALHKQMRIVKPKVASMEE 66
Query: 90 LLVVHSESYLKSLQ--SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLA 147
+ H+++YL+ LQ S + L +C + + + +GG + A
Sbjct: 67 MATFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYDCPATEGI-FDYAAAIGGATITAAQC 125
Query: 148 KERGW---AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
G AIN GG+HH DE GFC D L I ++ R++ +DLD H G+
Sbjct: 126 LIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGI--LRLRRKFERILYVDLDLHHGD 183
Query: 205 GHEKDFSSDSRVYILDM--FNPGIYPRDYEAR-------RFIDQKVEVVSGTTTNEYLKK 255
G E FS S+V + + F+PG +P + R+ V + G +Y +
Sbjct: 184 GVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQI 243
Query: 256 LDEALEVAGHTFDPELVIYNAGTDILEGDPL 286
+ L+ F+P+ V+ G D + GDP+
Sbjct: 244 CESVLKEVYQAFNPKAVVLQLGADTIAGDPM 274
>gi|221111993|ref|XP_002164615.1| PREDICTED: histone deacetylase 8-like [Hydra magnipapillata]
Length = 391
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 109/267 (40%), Gaps = 28/267 (10%)
Query: 47 FLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQ--- 103
++ I HP + + + S L IV P EAS DLL H+E Y+++L+
Sbjct: 16 YVSICDKHPKVKGRASMVHDLIESYDLLSLMKIVAPFEASCNDLLTYHTEKYIQTLEFVE 75
Query: 104 ------------SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK--LAKE 149
N I + + L +C + + + VGGT+ AA + +
Sbjct: 76 KRLVNSIESHEEDCFNEDEINYINEIGLGYDCSLFSNIYLYAKAIVGGTLSAANCLIDSQ 135
Query: 150 RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKD 209
+IN+ GG+HH DE GFC DI + I + +V+ IDLD H G+ E+
Sbjct: 136 AVVSINLNGGWHHARTDEASGFCYVNDIVIGILKLLTKF--KKVLYIDLDVHHGDYVEEA 193
Query: 210 FSSDSRVYIL------DMFNPGIYPRDYEAR---RFIDQKVEVVSGTTTNEYLKKLDEAL 260
F ++V D F PG ++ + ++ + G +
Sbjct: 194 FLYTNKVVTFSIHKFGDGFFPGTGMKNSIGKGKGKYYTINAPLKDGVDNKMFTYVFKNIF 253
Query: 261 EVAGHTFDPELVIYNAGTDILEGDPLG 287
H F PE+++ G D L GDPLG
Sbjct: 254 TEVFHCFSPEVIVVQCGADCLTGDPLG 280
>gi|392972395|ref|ZP_10337787.1| acetoin utilization protein AcuC [Staphylococcus equorum subsp.
equorum Mu2]
gi|403046271|ref|ZP_10901744.1| acetoin utilization protein [Staphylococcus sp. OJ82]
gi|392510108|emb|CCI61092.1| acetoin utilization protein AcuC [Staphylococcus equorum subsp.
equorum Mu2]
gi|402763980|gb|EJX18069.1| acetoin utilization protein [Staphylococcus sp. OJ82]
Length = 384
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 121/253 (47%), Gaps = 20/253 (7%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSL-QSSPNVSIII 112
HPF+ + + L+ G+L + I++P A+ +L ++HS Y++++ ++S +
Sbjct: 25 HPFNQMRLKLTTELLTDLGYLKSHHIIKPRIANDTELSLIHSHDYIQAIRRASHGILSDN 84
Query: 113 EVPPVALFPNCLVQRKVLYPFRKQ-VGGTI-LAAKLAKER-GWAINVGGGFHHCSADEGG 169
E L + +Q ++++ + VGG + LA + + ++GGG HH
Sbjct: 85 EAKKYGLDGDDTMQFRMMHKHSARIVGGALNLADHIMDDTVTNGCHLGGGLHHSLPGRAN 144
Query: 170 GFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG--IY 227
GFC Y D+++ I Y +Q RV+ ID DAH G+G + F ++ + I + G ++
Sbjct: 145 GFCIYNDVAVTIAY-LIQKYDQRVLCIDTDAHHGDGTQWSFYTNDQALIYSIHETGKFLF 203
Query: 228 PRDYEARRFIDQKVEVVSGTTTN----------EYLKKLDEALEVAGHTFDPELVIYNAG 277
P + R+ ++ E G T N +L+ E +E +F P++++ G
Sbjct: 204 P---GSGRYTERGSEQGFGYTVNIPLEPYTEDDSFLETFKETIEPIVASFKPDIIVSVHG 260
Query: 278 TDILEGDPLGMLK 290
DI DPL L
Sbjct: 261 VDIHYLDPLTHLN 273
>gi|196229464|ref|ZP_03128329.1| histone deacetylase superfamily [Chthoniobacter flavus Ellin428]
gi|196226696|gb|EDY21201.1| histone deacetylase superfamily [Chthoniobacter flavus Ellin428]
Length = 313
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 96/245 (39%), Gaps = 17/245 (6%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HP +++ + + L G +K +EP + EDL +VH YL+ + I
Sbjct: 19 HPESPARFAAVMERLKQSGLWEKLTPIEPRSVTSEDLELVHERDYLRLAERE------IR 72
Query: 114 VPPVALFP-NCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGF---HHCSADEGG 169
L + V R GG + A E A G HH S D G
Sbjct: 73 AGASQLSTGDTSVCEASWDAARLAAGGAMAAVDAVMEGKVANAFCAGRPPGHHASTDRGM 132
Query: 170 GFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPR 229
GFC +I++ +A + I RV+I+D D H GNG + F D V+ YP
Sbjct: 133 GFCVLNNIAIAARHAQRRHGIERVLIVDWDVHHGNGTQDIFYEDGSVFFFSTHQSPWYPG 192
Query: 230 DYEAR-------RFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILE 282
AR R + G+ E +E L A F P+ V+ +AG D
Sbjct: 193 TGHARETGAGEGRGTTLNCPLPGGSGHREIFVAFNEQLLPAMEKFQPQFVLVSAGFDSRG 252
Query: 283 GDPLG 287
GDPLG
Sbjct: 253 GDPLG 257
>gi|242374025|ref|ZP_04819599.1| acetoin utilization protein [Staphylococcus epidermidis M23864:W1]
gi|242348276|gb|EES39878.1| acetoin utilization protein [Staphylococcus epidermidis M23864:W1]
Length = 391
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 118/251 (47%), Gaps = 24/251 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQ-SSPNVSIII 112
HPF+ + + L FL I++P A+ ++L ++H Y+++++ +S +
Sbjct: 25 HPFNQMRLKLTTELLKEAKFLKPEHIIKPRIATDDELALIHKYDYIQAIRHASHGILSEE 84
Query: 113 EVPPVALFPNCLVQRKVLYPFRKQ-VGGTI-LAAKL---AKERGWAINVGGGFHHCSADE 167
E L VQ + ++ + VGG + LA +L + + G ++GGG HH +
Sbjct: 85 EAKKYGLNSEDTVQFRHMHRHSARIVGGALNLADRLMDGSLDNG--CHLGGGLHHAQSGR 142
Query: 168 GGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG-- 225
GFC Y D+++ Y + N RVMIID DAH G+G + F +D+++ + G
Sbjct: 143 ANGFCIYNDVAITAKYLVERYN-QRVMIIDTDAHHGDGTQWSFYTDNQIMTYSIHETGKF 201
Query: 226 IYPRDYEARRFIDQKVEVVSGTTTN----------EYLKKLDEALEVAGHTFDPELVIYN 275
++P + + ++ ++ G T N YL E +E F P++++
Sbjct: 202 LFP---GSGHYTERGEDLGYGYTVNVPLEPYTEDDSYLDVFKETVEPVIAAFKPDIILSV 258
Query: 276 AGTDILEGDPL 286
G DI DPL
Sbjct: 259 HGVDIHYRDPL 269
>gi|270288778|ref|NP_001119845.2| histone deacetylase 8 [Rattus norvegicus]
gi|392355737|ref|XP_003752118.1| PREDICTED: histone deacetylase 8-like [Rattus norvegicus]
gi|269969356|sp|B1WC68.1|HDAC8_RAT RecName: Full=Histone deacetylase 8; Short=HD8
gi|171847437|gb|AAI62023.1| Hdac8 protein [Rattus norvegicus]
Length = 377
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 100/221 (45%), Gaps = 15/221 (6%)
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQ--SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQ 136
IV+P AS E++ H+++YL+ LQ S + L +C +
Sbjct: 56 IVKPKVASMEEMATFHTDAYLQHLQKVSQEGDEDHPDSIEYGLGYDCPATEGIFDYAAAI 115
Query: 137 VGGTILAAK--LAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVM 194
GGTI AA+ + + AIN GG+HH DE GFC D L I ++ R++
Sbjct: 116 GGGTITAAQCLIDGKCKVAINWSGGWHHAKKDEASGFCYLNDAVLGI--LRLRRKFDRIL 173
Query: 195 IIDLDAHQGNGHEKDFSSDSRVYILDM--FNPGIYPRDYEAR-------RFIDQKVEVVS 245
+DLD H G+G E FS S+V + + F+PG +P + R+ V +
Sbjct: 174 YVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDMSDVGLGKGRYYSVNVPIQD 233
Query: 246 GTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPL 286
G +Y + L+ F+P+ V+ G D + GDP+
Sbjct: 234 GIQDEKYYHICESVLKEVYQAFNPKAVVLQLGADTIAGDPM 274
>gi|58037203|ref|NP_081658.1| histone deacetylase 8 [Mus musculus]
gi|29839376|sp|Q8VH37.2|HDAC8_MOUSE RecName: Full=Histone deacetylase 8; Short=HD8
gi|12847387|dbj|BAB27550.1| unnamed protein product [Mus musculus]
gi|38174721|gb|AAH61257.1| Histone deacetylase 8 [Mus musculus]
gi|74204857|dbj|BAE20928.1| unnamed protein product [Mus musculus]
Length = 377
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 100/221 (45%), Gaps = 15/221 (6%)
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQ--SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQ 136
IV+P AS E++ H+++YL+ LQ S + L +C +
Sbjct: 56 IVKPKVASMEEMATFHTDAYLQHLQKVSQEGDEDHPDSIEYGLGYDCPATEGIFDYAAAI 115
Query: 137 VGGTILAAK--LAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVM 194
GGTI AA+ + + AIN GG+HH DE GFC D L I ++ R++
Sbjct: 116 GGGTITAAQCLIDGKCKVAINWSGGWHHAKKDEASGFCYLNDAVLGI--LRLRRKFDRIL 173
Query: 195 IIDLDAHQGNGHEKDFSSDSRVYILDM--FNPGIYPRDYEAR-------RFIDQKVEVVS 245
+DLD H G+G E FS S+V + + F+PG +P + R+ V +
Sbjct: 174 YVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDMSDVGLGKGRYYSVNVPIQD 233
Query: 246 GTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPL 286
G +Y + L+ F+P+ V+ G D + GDP+
Sbjct: 234 GIQDEKYYHICESVLKEVYQAFNPKAVVLQLGADTIAGDPM 274
>gi|423634442|ref|ZP_17610095.1| hypothetical protein IK7_00851 [Bacillus cereus VD156]
gi|401280421|gb|EJR86341.1| hypothetical protein IK7_00851 [Bacillus cereus VD156]
Length = 397
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 116/274 (42%), Gaps = 32/274 (11%)
Query: 37 LIYSPDYDISFLG--IEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
IYS D FLG HPF+ + L GF+ + I+ P A+ E++ VH
Sbjct: 14 FIYSDD----FLGYSFSPDHPFNQLRVTLTYDLLQKGGFISPSQIISPRMATDEEIAYVH 69
Query: 95 SESYLKS--------LQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--A 144
+E Y+ + L+ S ++ + +FPN +L VGGT+ A A
Sbjct: 70 TEEYINAVKRAGEGKLEKSIAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDA 123
Query: 145 KLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
L+ + A+N+GGG HH + GFC Y D S+ + Y + + RV+ ID DAH G+
Sbjct: 124 VLSGKVKHALNLGGGLHHGFRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGD 182
Query: 205 GHEKDFSSDSRVYILDMFNPGIY---------PRDYEARRFIDQKVEVVSGTTTNEYLKK 255
G + F D V + + G Y R V + + T +L+
Sbjct: 183 GVQWSFYDDPNVCTISLHETGRYLFPGTGAVNERGQGNGYSYSFNVPLDAFTEDESFLES 242
Query: 256 LDEALEVAGHTFDPELVIYNAGTDILEGDPLGML 289
++ F P++++ G D DPL L
Sbjct: 243 YRTVVKEVAAYFKPDIILTQNGADAHYYDPLTHL 276
>gi|423614938|ref|ZP_17590772.1| hypothetical protein IIO_00264 [Bacillus cereus VD115]
gi|401261794|gb|EJR67945.1| hypothetical protein IIO_00264 [Bacillus cereus VD115]
Length = 397
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 115/272 (42%), Gaps = 28/272 (10%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
IYS D+ E HPF+ + L GF+ + ++ P A+ E++ VH+E
Sbjct: 14 FIYSDDFQGYSFSPE--HPFNQLRVTLTYDLLQKSGFISPSQVISPRMATDEEIAYVHTE 71
Query: 97 SYLKS--------LQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKL 146
Y+ + L+ S ++ + +FPN +L VGGT+ A A L
Sbjct: 72 EYIHAVKRAGEGKLEKSIAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVL 125
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
+ + A+N+GGG HH + GFC Y D S+ + Y + + RV+ ID DAH G+G
Sbjct: 126 SGKVKHALNLGGGLHHGFRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGV 184
Query: 207 EKDFSSDSRVYILDMFNPGIY---------PRDYEARRFIDQKVEVVSGTTTNEYLKKLD 257
+ F D V + + G Y R V + + T +L+
Sbjct: 185 QWSFYDDPNVCTISLHETGRYLFPGTGAVNERGQGNGYSYSFNVPLDAFTEDESFLESYR 244
Query: 258 EALEVAGHTFDPELVIYNAGTDILEGDPLGML 289
++ F P++++ G D DPL L
Sbjct: 245 TVVKEVAAYFKPDIILTQNGADAHYYDPLTHL 276
>gi|219109380|pdb|3EZT|A Chain A, Crystal Structure Analysis Of Human Hdac8 D101e Variant
gi|219109381|pdb|3EZT|B Chain B, Crystal Structure Analysis Of Human Hdac8 D101e Variant
Length = 388
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 117/271 (43%), Gaps = 25/271 (9%)
Query: 30 IPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKED 89
+P++ IYSP+Y + K+ + + + + + IV+P AS E+
Sbjct: 15 VPVY----IYSPEYVSMCDSLAKI----PKRASMVHSLIEAYALHKQMRIVKPKVASMEE 66
Query: 90 LLVVHSESYLKSLQ--SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLA 147
+ H+++YL+ LQ S + L C + + + +GG + A
Sbjct: 67 MATFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYECPATEGI-FDYAAAIGGATITAAQC 125
Query: 148 KERGW---AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
G AIN GG+HH DE GFC D L I ++ R++ +DLD H G+
Sbjct: 126 LIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGI--LRLRRKFERILYVDLDLHHGD 183
Query: 205 GHEKDFSSDSRVYILDM--FNPGIYPRDYEAR-------RFIDQKVEVVSGTTTNEYLKK 255
G E FS S+V + + F+PG +P + R+ V + G +Y +
Sbjct: 184 GVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQI 243
Query: 256 LDEALEVAGHTFDPELVIYNAGTDILEGDPL 286
+ L+ F+P+ V+ G D + GDP+
Sbjct: 244 CESVLKEVYQAFNPKAVVLQLGADTIAGDPM 274
>gi|226313749|ref|YP_002773643.1| acetoin utilization protein AcuC [Brevibacillus brevis NBRC 100599]
gi|226096697|dbj|BAH45139.1| acetoin utilization protein AcuC [Brevibacillus brevis NBRC 100599]
Length = 385
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 114/272 (41%), Gaps = 28/272 (10%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
LIYSPDY + + HPF+ + +SS G L I+ P A+ E+L +VH
Sbjct: 7 LIYSPDYTQYYFHDD--HPFNQRRLLLTHDLMSSYGILKDADILAPRPATDEELALVHDP 64
Query: 97 SYLKSLQSSPN--------VSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKL 146
Y++ ++ + S + V F N ++ VGGT+ A A +
Sbjct: 65 RYIQFVRDQGHSEHELPQAASYGLGTEDVPCFSNMHEASSLI------VGGTLNAVDAVM 118
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
+ + A N GG HH GFC Y D S+ I Y N +RV+ ID DAH G+G
Sbjct: 119 SGQAKHAFNPAGGLHHAFRGRASGFCIYNDCSVAIAYLRKNWN-ARVLYIDTDAHHGDGV 177
Query: 207 EKDFSSDSRVYILDMFNPGIY---------PRDYEARRFIDQKVEVVSGTTTNEYLKKLD 257
+ F D V + + G Y R + V + + T + +L+ D
Sbjct: 178 QWAFYDDPHVLTVSIHETGKYLFPGTGNLSERGDGSGYGYSVNVPLDAFTEDDSFLEVYD 237
Query: 258 EALEVAGHTFDPELVIYNAGTDILEGDPLGML 289
E + F P++++ G D DPL L
Sbjct: 238 ELVSNLAAGFKPDVILTQNGCDAHAYDPLTHL 269
>gi|384044609|ref|YP_005492626.1| Histone deacetylase family protein, involved in acetoin utilization
[Bacillus megaterium WSH-002]
gi|345442300|gb|AEN87317.1| Histone deacetylase family protein, involved in acetoin utilization
[Bacillus megaterium WSH-002]
Length = 387
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 109/255 (42%), Gaps = 26/255 (10%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HPF+ + + L G L IV P AS E+L +VH SY+++++ + + + +E
Sbjct: 22 HPFNQLRVQLTYELLREFGALGNQDIVLPRMASDEELQLVHDTSYIQAVKLAGSGELSVE 81
Query: 114 --------VPPVALFPNCLVQRKVLYPFRKQVGGTILAAK--LAKERGWAINVGGGFHHC 163
+FPN L VGGT+ A + + A+N+GGG HH
Sbjct: 82 KAADFGLGTEDTPMFPNMHEASAFL------VGGTLTAVDYVMTGKAKHALNLGGGLHHG 135
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D ++ I Y + N +RV+ +D DAH G+G + F D V L +
Sbjct: 136 FRGKASGFCIYNDSAVAIKYMQQKYN-ARVLYVDTDAHHGDGVQWTFYDDPSVCTLSIHE 194
Query: 224 PGIY---------PRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIY 274
G Y R + V V + T +L +L+ F P++++
Sbjct: 195 TGRYLFPGTGNVNERGHSEGYGYSFNVPVDAYTEDESWLDVYKTSLKEVAAFFKPDVILT 254
Query: 275 NAGTDILEGDPLGML 289
G D DPL L
Sbjct: 255 QNGADSHYYDPLTHL 269
>gi|221057225|ref|XP_002259750.1| histone deacetylase [Plasmodium knowlesi strain H]
gi|193809822|emb|CAQ40526.1| histone deacetylase, putative [Plasmodium knowlesi strain H]
Length = 471
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 125/259 (48%), Gaps = 15/259 (5%)
Query: 36 PLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKE--DLLVV 93
P ++ P Y S EK H F K+ +I L G + + + S+ L +
Sbjct: 178 PYVFHPIYS-SVPMKEKYHRFKMKKYEKIFSRLIEGGIYNSDYSIPSCNISEMIVPLFNI 236
Query: 94 HSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWA 153
H E +++ + S + +E + L P V R ++ ++ GTIL++ LA +
Sbjct: 237 HDEKFIEEIFSIVTHNKQVEKYELTLHPY-FVCRYLI-----EINGTILSSLLAMKYFMC 290
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSD 213
+++GGG HH + G GFC + D+++ +H+ I + +I+D+D HQG+G + F +
Sbjct: 291 MHIGGGNHHSKKNRGDGFCIFNDVAIAVHFLLSHGLIDKAIILDVDVHQGDGTAEIFRNC 350
Query: 214 SRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEAL-EVAGHTFDPELV 272
+ V + + +P +A ID +E S TT +YL++ + L ++A ++
Sbjct: 351 TNVKTISLHCRDNFP-PVKANSTID--IEFDSFTTDGDYLEEYRKVLDDIAAE--QNCII 405
Query: 273 IYNAGTDILEGDPLGMLKV 291
Y +G DI D LG L V
Sbjct: 406 FYLSGVDISADDDLGFLSV 424
>gi|386001547|ref|YP_005919846.1| Histone deacetylase family protein [Methanosaeta harundinacea 6Ac]
gi|357209603|gb|AET64223.1| Histone deacetylase family protein [Methanosaeta harundinacea 6Ac]
Length = 374
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 112/252 (44%), Gaps = 24/252 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNC-IVEPLEASKEDLLVVHSESYLKSL-QSSPNVSII 111
HP + + + G +D+ ++ P A++E+L +VH+ YL+++ + +P+++
Sbjct: 19 HPLSPIRVSLAHKLIEDSGLIDERTRVLRPEPATEEELSLVHTLEYLEAVREEAPDLAFG 78
Query: 112 IEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK-LAKERGWAINVGGGFHHCSADEGGG 170
+ +FP + GG+I AAK + +E A N+ GG HH + G
Sbjct: 79 LGSDDTPVFPGIFEASCSM------AGGSIEAAKKILEEDCAAFNLAGGLHHAFPTQAAG 132
Query: 171 FCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRD 230
FC + D +L I + ++ SRV+ ID+DAH G+G ++ F D V + G Y
Sbjct: 133 FCVFNDAALAI--SVLKRRFSRVLYIDIDAHHGDGVQQIFYEDPEVLTFSIHESGKY--L 188
Query: 231 YEARRFIDQ-----------KVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTD 279
+ F+D+ V + ++L +E F PE V+ G D
Sbjct: 189 FPGTGFVDEAGAGPGLGYSVNVPMPMNAGDRDFLLAFEEVGPKLFDWFRPEAVVAQLGVD 248
Query: 280 ILEGDPLGMLKV 291
DPL L V
Sbjct: 249 THYSDPLTSLNV 260
>gi|295706899|ref|YP_003599974.1| acetoin utilization protein AcuC [Bacillus megaterium DSM 319]
gi|294804558|gb|ADF41624.1| acetoin utilization protein AcuC [Bacillus megaterium DSM 319]
Length = 387
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 109/255 (42%), Gaps = 26/255 (10%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HPF+ + + L G L IV P AS E+L +VH SY+++++ + + + +E
Sbjct: 22 HPFNQLRVQLTYELLREFGALGNQDIVLPRMASDEELQLVHDTSYIQAVKLAGSGELSVE 81
Query: 114 --------VPPVALFPNCLVQRKVLYPFRKQVGGTILAAK--LAKERGWAINVGGGFHHC 163
+FPN L VGGT+ A + + A+N+GGG HH
Sbjct: 82 KAADFGLGTEDTPMFPNMHEASAFL------VGGTLTAVDYVMTGKAKHALNLGGGLHHG 135
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D ++ I Y + N +RV+ +D DAH G+G + F D V L +
Sbjct: 136 FRGKASGFCIYNDSAVAIKYMQQKYN-ARVLYVDTDAHHGDGVQWTFYDDPSVCTLSIHE 194
Query: 224 PGIY---------PRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIY 274
G Y R + V V + T +L +L+ F P++++
Sbjct: 195 TGRYLFPGTGNVNERGHSEGYGYSFNVPVDAYTEDESWLDVYKTSLKEVAAFFKPDVILT 254
Query: 275 NAGTDILEGDPLGML 289
G D DPL L
Sbjct: 255 QNGADSHYYDPLTHL 269
>gi|304320465|ref|YP_003854108.1| histone deacetylase/AcuC/AphA family protein [Parvularcula
bermudensis HTCC2503]
gi|303299367|gb|ADM08966.1| putative histone deacetylase/AcuC/AphA family protein [Parvularcula
bermudensis HTCC2503]
Length = 299
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 122/264 (46%), Gaps = 31/264 (11%)
Query: 39 YSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESY 98
YS D+ I+ + H F + K+ + L E L + A + ++ V H+ESY
Sbjct: 5 YSSDFTIA---LPAGHRFPAIKYQLLKTALIEERLLPAERLAPSPAAREGEIKVAHTESY 61
Query: 99 LKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPF--------RKQVGGTILAAKLAKER 150
+ SL+ + P A+ R++ +P+ ++ VGG + AA+ A +
Sbjct: 62 IASLREG-------TIDPRAM-------RRIGFPWSPHIHRRGQRTVGGALAAARRALKE 107
Query: 151 GWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDF 210
G + + GG HH A+ G G+C Y D ++ + + R+ I+DLD HQG+G+
Sbjct: 108 GLSGQLAGGTHHAHAEAGSGYCIYNDFAVVARTLLNEGVVDRIAIVDLDVHQGDGNAAML 167
Query: 211 SSDSRVYILDMFNPGIYP-RDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDP 269
+ VYILD+F +P R A V + T +L ++ L F+P
Sbjct: 168 TDHPGVYILDVFGEKNFPFRKVPA----TLDVPLPDRTEDGAFLAAIEAHLPQV-WAFEP 222
Query: 270 ELVIYNAGTDILEGDPLGMLKVKW 293
+L++Y AG D L D LG L + +
Sbjct: 223 DLLLYQAGVDPLASDKLGRLDISF 246
>gi|359426187|ref|ZP_09217274.1| putative acetoin utilization protein [Gordonia amarae NBRC 15530]
gi|358238664|dbj|GAB06856.1| putative acetoin utilization protein [Gordonia amarae NBRC 15530]
Length = 377
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 108/247 (43%), Gaps = 37/247 (14%)
Query: 70 SEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVP----------PVAL 119
S G LD +V P A LL H+ YL +++ +P+ S+ EVP PV
Sbjct: 15 SLGLLDHLDLVAPDPADDGLLLRAHTADYLAAVKQAPDPSV--EVPGGYGLGGEDNPV-- 70
Query: 120 FPNCLVQRKVLYPFRKQVGGTILAAKL--AKERGWAINVGGGFHHCSADEGGGFCAYADI 177
F + V+ VGGT+ AA+ E A+++GGG HH + GFC Y D+
Sbjct: 71 FEHMHEAASVI------VGGTLRAARAIATGEATRAVSIGGGMHHAMPESAAGFCLYNDV 124
Query: 178 SLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRD-YEARRF 236
++ I + +I RV ID+D H G+G ++ F+ D RV + + PR + +
Sbjct: 125 AVAISWLLDNTDIQRVAYIDVDVHHGDGVQRAFADDPRVLTISVHQD---PRTLWPCTGY 181
Query: 237 IDQKVEVVS-----------GTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDP 285
+ E + GT +L+ + F P++++ G D DP
Sbjct: 182 SSEVGEGAAAGSIVNLPLPPGTRDTHWLRAYHAVVPQVVSVFGPDIIVSQCGVDTHRADP 241
Query: 286 LGMLKVK 292
LG ++
Sbjct: 242 LGEFEMT 248
>gi|219109371|pdb|3EW8|A Chain A, Crystal Structure Analysis Of Human Hdac8 D101l Variant
Length = 388
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 119/274 (43%), Gaps = 31/274 (11%)
Query: 30 IPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKED 89
+P++ IYSP+Y + K+ + + + + + IV+P AS E+
Sbjct: 15 VPVY----IYSPEYVSMCDSLAKI----PKRASMVHSLIEAYALHKQMRIVKPKVASMEE 66
Query: 90 LLVVHSESYLKSLQ-----SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAA 144
+ H+++YL+ LQ + IE L P + ++ + +GG + A
Sbjct: 67 MATFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYLCP----ATEGIFDYAAAIGGATITA 122
Query: 145 KLAKERGW---AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAH 201
G AIN GG+HH DE GFC D L I ++ R++ +DLD H
Sbjct: 123 AQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGI--LRLRRKFERILYVDLDLH 180
Query: 202 QGNGHEKDFSSDSRVYILDM--FNPGIYPRDYEAR-------RFIDQKVEVVSGTTTNEY 252
G+G E FS S+V + + F+PG +P + R+ V + G +Y
Sbjct: 181 HGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKY 240
Query: 253 LKKLDEALEVAGHTFDPELVIYNAGTDILEGDPL 286
+ + L+ F+P+ V+ G D + GDP+
Sbjct: 241 YQICESVLKEVYQAFNPKAVVLQLGADTIAGDPM 274
>gi|299689322|pdb|3MZ4|A Chain A, Crystal Structure Of D101l Mn2+ Hdac8 Complexed With M344
gi|299689323|pdb|3MZ4|B Chain B, Crystal Structure Of D101l Mn2+ Hdac8 Complexed With M344
gi|299689325|pdb|3MZ6|A Chain A, Crystal Structure Of D101l Fe2+ Hdac8 Complexed With M344
gi|299689327|pdb|3MZ7|A Chain A, Crystal Structure Of D101l Co2+ Hdac8 Complexed With M344
Length = 389
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 119/274 (43%), Gaps = 31/274 (11%)
Query: 30 IPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKED 89
+P++ IYSP+Y + K+ + + + + + IV+P AS E+
Sbjct: 15 VPVY----IYSPEYVSMCDSLAKI----PKRASMVHSLIEAYALHKQMRIVKPKVASMEE 66
Query: 90 LLVVHSESYLKSLQ-----SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAA 144
+ H+++YL+ LQ + IE L P + ++ + +GG + A
Sbjct: 67 MATFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYLCP----ATEGIFDYAAAIGGATITA 122
Query: 145 KLAKERGW---AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAH 201
G AIN GG+HH DE GFC D L I ++ R++ +DLD H
Sbjct: 123 AQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGI--LRLRRKFERILYVDLDLH 180
Query: 202 QGNGHEKDFSSDSRVYILDM--FNPGIYPRDYEAR-------RFIDQKVEVVSGTTTNEY 252
G+G E FS S+V + + F+PG +P + R+ V + G +Y
Sbjct: 181 HGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKY 240
Query: 253 LKKLDEALEVAGHTFDPELVIYNAGTDILEGDPL 286
+ + L+ F+P+ V+ G D + GDP+
Sbjct: 241 YQICESVLKEVYQAFNPKAVVLQLGADTIAGDPM 274
>gi|75760728|ref|ZP_00740751.1| Acetoin utilization acuC protein [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|74491783|gb|EAO54976.1| Acetoin utilization acuC protein [Bacillus thuringiensis serovar
israelensis ATCC 35646]
Length = 397
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 109/255 (42%), Gaps = 26/255 (10%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + I+ P A+ E++ VH+E Y+ + L+ S
Sbjct: 29 HPFNQLRVTLTYDXLQKGGFISPSQIISPRMATDEEIAYVHTEEYINAVKRAGEGKLEKS 88
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 89 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 142
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 143 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 201
Query: 224 PGIY---------PRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIY 274
G Y R V + + T +LK ++ F P++++
Sbjct: 202 TGRYLFPGTGAVNERGQGNGYSYSFNVPLDAFTEDESFLKSYRTVVKEVAAYFKPDIILT 261
Query: 275 NAGTDILEGDPLGML 289
G D DPL L
Sbjct: 262 QNGADAHYYDPLTHL 276
>gi|332527742|ref|ZP_08403783.1| hypothetical protein RBXJA2T_17377 [Rubrivivax benzoatilyticus JA2]
gi|332112140|gb|EGJ12116.1| hypothetical protein RBXJA2T_17377 [Rubrivivax benzoatilyticus JA2]
Length = 314
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 74/153 (48%), Gaps = 20/153 (13%)
Query: 151 GWAINVGGGFHHCSADEGGGFCAYADISLC----------IHYAFVQLNISRVMIIDLDA 200
G A N+ GG HH A +G G+C + D+++ +H A +Q V+++DLD
Sbjct: 108 GVAANLAGGTHHAYAHKGSGYCVFNDVAVAARLMQAEWYRVHRAGLQ-----VLVVDLDV 162
Query: 201 HQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEAL 260
HQGNG F D+ V+ L + +P EA D VE+ G EYL LD AL
Sbjct: 163 HQGNGTASIFRDDASVFTLSLHGAKNFPFRKEAS---DLDVELPDGCADAEYLAALDAAL 219
Query: 261 EVAGHTFD--PELVIYNAGTDILEGDPLGMLKV 291
A P L Y AG D EGD LG LK+
Sbjct: 220 SEAWRRLRTPPGLAFYLAGADPHEGDRLGRLKL 252
>gi|337287253|ref|YP_004626726.1| histone deacetylase superfamily [Thermodesulfatator indicus DSM
15286]
gi|335360081|gb|AEH45762.1| histone deacetylase superfamily [Thermodesulfatator indicus DSM
15286]
Length = 347
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 105/245 (42%), Gaps = 11/245 (4%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HP + +I L + I+ P EA+ E+L HS Y+K++Q + S+ ++
Sbjct: 20 HPERPERLEKIYSRLEKPDINNLYKILAPREATFEELTWNHSPEYVKTVQQTSGQSVQLD 79
Query: 114 VPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCA 173
A P + + + VG + + AK+ + G HH D GFC
Sbjct: 80 AD-TATSPESY-EAAIKAVGAQFVGLDAIFSDQAKQVFALVRPPG--HHAEYDRAMGFCL 135
Query: 174 YADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP----- 228
+ +++L HYA +L + R++I+D D H GNG +K F V YP
Sbjct: 136 FNNVALAAHYALKKLGLKRILIVDWDLHHGNGTQKSFYHHREVLFFSSHQYPYYPGTGTV 195
Query: 229 --RDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPL 286
+ V + +G EY + L F PELV+ +AG DI GDPL
Sbjct: 196 EEIGEGEGKGFTVNVPLPAGCGDLEYATVYRQILLPIAERFKPELVLVSAGFDIYFGDPL 255
Query: 287 GMLKV 291
G ++V
Sbjct: 256 GGMQV 260
>gi|146085868|ref|XP_001465379.1| putative histone deacetylase [Leishmania infantum JPCM5]
gi|134069477|emb|CAM67800.1| putative histone deacetylase [Leishmania infantum JPCM5]
Length = 430
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 123/269 (45%), Gaps = 23/269 (8%)
Query: 39 YSPDYDIS-FLGIEKLHPFDSSKWGRICQFLSSEGFLDKNC--IVEPLEASKEDLLVVHS 95
Y+ D +IS F+ + P+ I + L +D +C +V PL E+L+ H+
Sbjct: 30 YASDMNISAFVPQHAMKPYRVLAAMEIVRSLK----IDAHCRTVVPPL-VKVEELMAYHT 84
Query: 96 ESYLKSLQSSPNVSII--IEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKL--AKERG 151
++YL +L S + E V +C ++ GT++ A L + +
Sbjct: 85 DTYLANLGLHSCRSWLWNAETSKVFFSGDCPPVEGLMEHSIATASGTLMGAVLLNSGQVD 144
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A++ GGG HH E GFC DI L I ++ + RV+ +D+D H G+G ++ F
Sbjct: 145 VAVHWGGGMHHSKCGECSGFCYVNDIVLGI-LELLKCH-DRVLYVDIDMHHGDGVDEAFC 202
Query: 212 SDSRVYILDM------FNPGI-YPRD--YEARRFIDQKVEVVSGTTTNEYLKKLDEALEV 262
+ RV+ L + F PG +PRD Y R+ + V G T YL + AL
Sbjct: 203 TSDRVFTLSLHKFGESFFPGTGHPRDVGYGRGRYYSMNLAVWDGITDFYYLGVFEHALHS 262
Query: 263 AGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ P+ ++ G D L GD LG+L +
Sbjct: 263 IVRRYSPDAIVLQCGADSLAGDRLGLLNL 291
>gi|157868898|ref|XP_001683001.1| putative histone deacetylase [Leishmania major strain Friedlin]
gi|68223884|emb|CAJ04180.1| putative histone deacetylase [Leishmania major strain Friedlin]
Length = 428
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 123/269 (45%), Gaps = 23/269 (8%)
Query: 39 YSPDYDIS-FLGIEKLHPFDSSKWGRICQFLSSEGFLDKNC--IVEPLEASKEDLLVVHS 95
Y+ D +IS F+ + P+ I + L +D +C +V PL E+L+ H+
Sbjct: 30 YASDMNISAFVPQHAMKPYRVLAAMEIVRSLK----IDAHCRTVVPPL-VKVEELMAYHT 84
Query: 96 ESYLKSLQSSPNVSII--IEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKL--AKERG 151
++YL +L S + E V +C ++ GT++ A L + +
Sbjct: 85 DTYLANLGLHSCRSWLWNAETSKVFFSGDCPPVEGLMEHSIATASGTLMGAVLLNSGQVD 144
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A++ GGG HH E GFC DI L I ++ + RV+ +D+D H G+G ++ F
Sbjct: 145 VAVHWGGGMHHSKCGECSGFCYVNDIVLGI-LELLKCH-DRVLYVDIDMHHGDGVDEAFC 202
Query: 212 SDSRVYILDM------FNPGI-YPRD--YEARRFIDQKVEVVSGTTTNEYLKKLDEALEV 262
+ RV+ L + F PG +PRD Y R+ + V G T YL + AL
Sbjct: 203 TSDRVFTLSLHKFGESFFPGTGHPRDVGYGRGRYYSMNLAVWDGITDFYYLGIFEHALHS 262
Query: 263 AGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ P+ ++ G D L GD LG+L +
Sbjct: 263 IVRRYSPDAIVLQCGADSLAGDRLGLLNL 291
>gi|403070424|ref|ZP_10911756.1| acetoin utilization protein [Oceanobacillus sp. Ndiop]
Length = 383
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 117/272 (43%), Gaps = 30/272 (11%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
++S D+ I E HPF+ + + L + L I+ P A++E++ + H
Sbjct: 7 FVFSDDFLIYHFNEE--HPFNQKRVLLAKELLEASAMLYAQDIIPPRMATEEEIGLFHDR 64
Query: 97 SYLKSLQSSPNVS--------IIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK--L 146
+Y+ +++ + ++S + E P+ FPN VGGT+ A L
Sbjct: 65 AYINAVKQADSLSEDEAYEYGLGTEDTPI--FPNMHEASSF------AVGGTLTAVDEVL 116
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
R A+N+GGG HH + GFC Y D ++ I Y + N+ +V+ +D DAH G+G
Sbjct: 117 TGRRDHALNLGGGLHHALQRKAAGFCIYNDCAIAIKYIREKYNL-KVLYVDTDAHHGDGV 175
Query: 207 EKDFSSDSRVYILDMFNPGIY---PRDYEARRFIDQ------KVEVVSGTTTNEYLKKLD 257
+ F D V + G Y + R I Q + + + T YL +
Sbjct: 176 QWAFYDDPNVCTFSIHETGRYLFPGSGNVSERGIKQGHGYSFNLPIDAFTQDESYLHSYE 235
Query: 258 EALEVAGHTFDPELVIYNAGTDILEGDPLGML 289
A F+P+++I G D DPL L
Sbjct: 236 TAFREIAKFFNPDIIITQNGADAHCFDPLTHL 267
>gi|224012517|ref|XP_002294911.1| histone deacetylase Rpd3 HDA2 HDA1 HDAC HD2 [Thalassiosira
pseudonana CCMP1335]
gi|220969350|gb|EED87691.1| histone deacetylase Rpd3 HDA2 HDA1 HDAC HD2 [Thalassiosira
pseudonana CCMP1335]
Length = 348
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 91/191 (47%), Gaps = 31/191 (16%)
Query: 124 LVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHY 183
L++R VL +V GT+L A+LA + G A ++ GG HH + G GF D+++
Sbjct: 108 LIERTVL-----EVAGTVLTAQLAMKYGLACHLAGGTHHAESCRGKGFTILNDLAVVAR- 161
Query: 184 AFVQLN----ISRVMIIDLDAHQGNG--------------HEKDFSSDS---RVYILDMF 222
+ N + RV+++D D HQG+G +K F + + ++Y LD+
Sbjct: 162 -LMTWNEGDEVERVLVVDCDVHQGDGTATFHTDQTSPSNNKDKTFPATNLCNKLYTLDLH 220
Query: 223 NPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILE 282
YP E + V + YL L +AL+ A +P+LV+YNAG D+
Sbjct: 221 AESNYPHPKEKCTY---DVPLPDDCDDELYLSSLGDALDRALEEVNPQLVLYNAGVDVYH 277
Query: 283 GDPLGMLKVKW 293
D LG L + W
Sbjct: 278 SDKLGRLSLSW 288
>gi|219109382|pdb|3F06|A Chain A, Crystal Structure Analysis Of Human Hdac8 D101a Variant.
gi|219109383|pdb|3F06|B Chain B, Crystal Structure Analysis Of Human Hdac8 D101a Variant
Length = 388
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 117/271 (43%), Gaps = 25/271 (9%)
Query: 30 IPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKED 89
+P++ IYSP+Y + K+ + + + + + IV+P AS E+
Sbjct: 15 VPVY----IYSPEYVSMCDSLAKI----PKRASMVHSLIEAYALHKQMRIVKPKVASMEE 66
Query: 90 LLVVHSESYLKSLQ--SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLA 147
+ H+++YL+ LQ S + L C + + + +GG + A
Sbjct: 67 MATFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYACPATEGI-FDYAAAIGGATITAAQC 125
Query: 148 KERGW---AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
G AIN GG+HH DE GFC D L I ++ R++ +DLD H G+
Sbjct: 126 LIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGI--LRLRRKFERILYVDLDLHHGD 183
Query: 205 GHEKDFSSDSRVYILDM--FNPGIYPRDYEAR-------RFIDQKVEVVSGTTTNEYLKK 255
G E FS S+V + + F+PG +P + R+ V + G +Y +
Sbjct: 184 GVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQI 243
Query: 256 LDEALEVAGHTFDPELVIYNAGTDILEGDPL 286
+ L+ F+P+ V+ G D + GDP+
Sbjct: 244 CESVLKEVYQAFNPKAVVLQLGADTIAGDPM 274
>gi|423582877|ref|ZP_17558988.1| hypothetical protein IIA_04392 [Bacillus cereus VD014]
gi|401211692|gb|EJR18439.1| hypothetical protein IIA_04392 [Bacillus cereus VD014]
Length = 397
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 116/274 (42%), Gaps = 32/274 (11%)
Query: 37 LIYSPDYDISFLG--IEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVH 94
IYS D FLG HPF+ + L GF+ + I+ P A+ E++ VH
Sbjct: 14 FIYSDD----FLGYSFSPDHPFNQLRVTLTYDLLQKGGFISPSQIISPRMATDEEIAYVH 69
Query: 95 SESYLKS--------LQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--A 144
+E Y+ + L+ S ++ + +FPN +L VGGT+ A A
Sbjct: 70 TEEYINAVKRAGEGKLEKSIAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDA 123
Query: 145 KLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGN 204
L+ + A+N+GGG HH + GFC Y D S+ + Y + + RV+ ID DAH G+
Sbjct: 124 VLSGKVKHALNLGGGLHHGFRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGD 182
Query: 205 GHEKDFSSDSRVYILDMFNPGIY---------PRDYEARRFIDQKVEVVSGTTTNEYLKK 255
G + F D V + + G Y R V + + T +L+
Sbjct: 183 GVQWSFYDDPNVCTVSLHETGRYLFPGTGAVNERGQGNGYSYSFNVPLDAFTEDESFLES 242
Query: 256 LDEALEVAGHTFDPELVIYNAGTDILEGDPLGML 289
++ F P++++ G D DPL L
Sbjct: 243 YRTVVKEVAAYFKPDIILTQNGADAHYYDPLTHL 276
>gi|225708990|gb|ACO10341.1| Histone deacetylase 8 [Caligus rogercresseyi]
Length = 373
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 96/223 (43%), Gaps = 17/223 (7%)
Query: 84 EASKEDLLVVHSESYLKSLQS----SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGG 139
EA+ E L HS+ YL L S N E V + C ++ R+ G
Sbjct: 53 EATHEKLKSFHSQDYLDKLNSMDDPKDNPENHQEQEEVGIGYECPWIPNIMSFVRRVAGA 112
Query: 140 TILAAK-LAK-ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIID 197
+I AA+ LA+ E +IN GG+HH D GFC DI L IH ++ +++ +D
Sbjct: 113 SITAAESLAQSESQISINWFGGWHHAQRDSASGFCYVNDIVLAIHT--LKKTFDKILYVD 170
Query: 198 LDAHQGNGHEKDFSSDSRVYILDM--FNPGIYPRDYEARRF-------IDQKVEVVSGTT 248
LD H G+G E F+ +VY M + G +P + V + G
Sbjct: 171 LDVHHGDGVENAFAFTPKVYTFSMHLYEKGFFPGSGKVEDVGQGNGTNFATNVPIKRGID 230
Query: 249 TNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+Y ++ + F P+ ++ G D+L GDPLG V
Sbjct: 231 DEQYAYIFTNLMDEICYAFRPDAIVVQCGGDVLAGDPLGGFNV 273
>gi|427778695|gb|JAA54799.1| Putative hdac6 [Rhipicephalus pulchellus]
Length = 587
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 124/289 (42%), Gaps = 22/289 (7%)
Query: 22 LSSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVE 81
L SK D+P + L+Y E+ HP + + Q + G L+ +++
Sbjct: 71 LRSKTNLDVPPNRTALVYDERMAKHRCLDERGHPERPERILKPWQVMEKRGLLNLCILLD 130
Query: 82 PLEASKEDLLVVHSESYLKSL---QSSPNVSIII---EVPPVALFPNCLVQRKVLYPFRK 135
A+ ++LL+VH + Y++ + Q N +I + P V L + +
Sbjct: 131 SRSATVDELLMVHDKKYVQKMRGCQEMKNADLIKLQEKYPSVYLCRDTFSSALLAAGSLL 190
Query: 136 QVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMI 195
Q+ + K + G A+ G HH E GGFC + ++++ +A + R++I
Sbjct: 191 QLVDAVCTNKC--QNGMALIRPPG-HHAERGEAGGFCIFNNVAIAARHAIETYGLQRILI 247
Query: 196 IDLDAHQGNGHEKDFSSDSRVYILDM-------FNPGIYPRDYEA------RRFIDQKVE 242
+D D H GNG + F D RV L + F P + D+ A + F
Sbjct: 248 LDWDVHHGNGTQHAFYDDPRVLYLSIHRYDNGSFFPCLPEADFGAVGEGAGQGFNINVAW 307
Query: 243 VVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
G + +YL + + + ++PELV+ ++G D GDPLG +V
Sbjct: 308 NSEGMSDGDYLTAFFQLVLPVAYAYNPELVLVSSGFDSCVGDPLGYCRV 356
>gi|149203338|ref|ZP_01880308.1| acetoin utilization protein AcuC [Roseovarius sp. TM1035]
gi|149143171|gb|EDM31210.1| acetoin utilization protein AcuC [Roseovarius sp. TM1035]
Length = 371
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 105/249 (42%), Gaps = 15/249 (6%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HP + + + G+L + A + L HS +Y+ +LQ++ + +
Sbjct: 21 HPLSIPRVPTVIDLCRALGWLPPSQYRISPRAKPQALTAWHSPAYIAALQAAETLGQV-- 78
Query: 114 VPPVALFPNCLVQRKVLYP--FRK---QVGGTILAAKLAKERGWAINVGGGFHHCSADEG 168
P + ++P FR+ GG++LA +L G A N GGG HH AD
Sbjct: 79 SPEIRARHQIGTLSNPVFPEMFRRPATAAGGSLLATELLAHGGVAYNPGGGTHHGMADHA 138
Query: 169 GGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
GGFC D L I AF+ +SR+ +D+DAH +G F D RV ++ G +P
Sbjct: 139 GGFCYLNDPVLAIK-AFLAQGLSRIAYVDIDAHHCDGVAAAFHGDPRVLMISTHEAGRWP 197
Query: 229 -----RDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEG 283
D ++ + + T + + L E + A F P ++ G D +
Sbjct: 198 FTGTVDDRAGGHALN--LPLPRATNDSGFAMALHEVILPAVQAFTPHALVLQCGADAVTE 255
Query: 284 DPLGMLKVK 292
DPL L +
Sbjct: 256 DPLSRLALS 264
>gi|449091626|ref|YP_007424067.1| hypothetical protein HD73_4968 [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|449025383|gb|AGE80546.1| hypothetical protein HD73_4968 [Bacillus thuringiensis serovar
kurstaki str. HD73]
Length = 388
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 108/255 (42%), Gaps = 26/255 (10%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + I+ P A+ E++ VH+E Y+ + L+ S
Sbjct: 20 HPFNQLRVTLTYDLLQKGGFISPSQIISPRMATDEEIAYVHTEEYINAVKRAGEGKLEKS 79
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 80 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 133
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ I Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 134 FRGKASGFCIYNDSSIAIKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 192
Query: 224 PGIY---------PRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIY 274
G Y R V + + T +L+ + F P++++
Sbjct: 193 TGRYLFPGTGAVNERGQGNGYSYSFNVPLDAFTEDESFLESYRTVVTEVAAYFKPDIILT 252
Query: 275 NAGTDILEGDPLGML 289
G D DPL L
Sbjct: 253 QNGADAHYYDPLTHL 267
>gi|423426796|ref|ZP_17403827.1| hypothetical protein IE5_04485 [Bacillus cereus BAG3X2-2]
gi|423502653|ref|ZP_17479245.1| hypothetical protein IG1_00219 [Bacillus cereus HD73]
gi|401110362|gb|EJQ18271.1| hypothetical protein IE5_04485 [Bacillus cereus BAG3X2-2]
gi|402459892|gb|EJV91620.1| hypothetical protein IG1_00219 [Bacillus cereus HD73]
Length = 397
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 108/255 (42%), Gaps = 26/255 (10%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + I+ P A+ E++ VH+E Y+ + L+ S
Sbjct: 29 HPFNQLRVTLTYDLLQKGGFISPSQIISPRMATDEEIAYVHTEEYINAVKRAGEGKLEKS 88
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 89 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 142
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ I Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 143 FRGKASGFCIYNDSSIAIKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 201
Query: 224 PGIY---------PRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIY 274
G Y R V + + T +L+ + F P++++
Sbjct: 202 TGRYLFPGTGAVNERGQGNGYSYSFNVPLDAFTEDESFLESYRTVVTEVAAYFKPDIILT 261
Query: 275 NAGTDILEGDPLGML 289
G D DPL L
Sbjct: 262 QNGADAHYYDPLTHL 276
>gi|261253511|ref|ZP_05946084.1| histone deacetylase/AcuC/AphA family protein [Vibrio orientalis CIP
102891 = ATCC 33934]
gi|417956016|ref|ZP_12599014.1| histone deacetylase/AcuC/AphA family protein [Vibrio orientalis CIP
102891 = ATCC 33934]
gi|260936902|gb|EEX92891.1| histone deacetylase/AcuC/AphA family protein [Vibrio orientalis CIP
102891 = ATCC 33934]
gi|342811536|gb|EGU46573.1| histone deacetylase/AcuC/AphA family protein [Vibrio orientalis CIP
102891 = ATCC 33934]
Length = 307
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 124/271 (45%), Gaps = 34/271 (12%)
Query: 35 LPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSE-----GFLDKNCIVEPLEASKED 89
+PLIY Y S L + + H + +K+ + ++SE + ++ V P ++
Sbjct: 2 IPLIYHSIY--SELPLPEGHRYPINKYRLLHDAINSEINANAAWQEQFTHVVPSMLDRQA 59
Query: 90 LLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTI 141
+ VH + Y+ L S + P + R++ +P+ + + GGT
Sbjct: 60 VTQVHCQEYIDLLFSG-----TLPAPKM---------RRIGFPWSETLITRTLTSAGGTC 105
Query: 142 LAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAH 201
+ E G AI++ GG+HH D G GFC D+ L A +I +V+I+D D H
Sbjct: 106 ETVNQSVEHGIAIHLSGGYHHAHHDFGSGFCLVNDLVLAAKRALTIDDIDKVLIVDSDVH 165
Query: 202 QGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARR-FIDQKVEVVSGTTTNEYLKKLDEAL 260
G+G + D+ + L +P AR+ D V + + +E+L+ +
Sbjct: 166 HGDGTATLCADDASIVTLSFHCDKNFP----ARKPQSDLDVPLARESGDDEFLETFTSVV 221
Query: 261 EVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
E+A + P+L++Y+AG DI + D LG L V
Sbjct: 222 EMAVNLHQPDLILYDAGVDIHKDDELGYLSV 252
>gi|308094689|ref|ZP_05891236.2| histone deacetylase/AcuC/AphA family protein [Vibrio
parahaemolyticus AN-5034]
gi|308094251|gb|EFO43946.1| histone deacetylase/AcuC/AphA family protein [Vibrio
parahaemolyticus AN-5034]
Length = 288
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 86/174 (49%), Gaps = 13/174 (7%)
Query: 127 RKVLYPFRKQV--------GGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADIS 178
R++ +P+ + + GT+L A+ A E G A+++ GG+HH D G GFC + D+
Sbjct: 64 RRIGFPWSEALITRTLTSAAGTLLTAEKALEHGIALHLSGGYHHAHKDFGSGFCLFNDLV 123
Query: 179 LCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARR-FI 237
+ + ++ +++IID D H G+G + + L +P AR+
Sbjct: 124 IAAKHMLDNEHVDKILIIDSDVHHGDGTATLCQEEPDIVTLSFHCDKNFP----ARKPQS 179
Query: 238 DQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
D V + GT +L E +E+A + P++VIY+AG DI + D LG V
Sbjct: 180 DLDVPLAKGTDDETFLMTFKEVVEMALNLHRPDMVIYDAGVDIHQDDELGYFDV 233
>gi|294501551|ref|YP_003565251.1| acetoin utilization protein AcuC [Bacillus megaterium QM B1551]
gi|294351488|gb|ADE71817.1| acetoin utilization protein AcuC [Bacillus megaterium QM B1551]
Length = 387
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 109/255 (42%), Gaps = 26/255 (10%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HPF+ + + L G L IV P AS E+L +VH SY+++++ + + + +E
Sbjct: 22 HPFNQLRVQLTYELLREFGALGNQDIVLPRMASDEELQLVHDTSYIQAVKLAGSGELSVE 81
Query: 114 --------VPPVALFPNCLVQRKVLYPFRKQVGGTILAAK--LAKERGWAINVGGGFHHC 163
+FPN L VGGT+ A + + A+N+GGG HH
Sbjct: 82 KAADFGLGTEDTPMFPNMHEASAFL------VGGTLTAVDYVMTGKAKHALNLGGGLHHG 135
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D ++ I Y + N +RV+ +D DAH G+G + F D V L +
Sbjct: 136 FRGKASGFCIYNDSAVAIKYMQQKYN-ARVLYVDTDAHHGDGVQWTFYDDPSVCTLSIHE 194
Query: 224 PGIY---------PRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIY 274
G Y R + V V + T +L +L+ F P++++
Sbjct: 195 TGRYLFPGTGNVNERGHGEGYGYSFNVPVDAYTEDESWLDVYKTSLKEVAAFFKPDVILT 254
Query: 275 NAGTDILEGDPLGML 289
G D DPL L
Sbjct: 255 QNGADSHYYDPLTHL 269
>gi|398815069|ref|ZP_10573742.1| deacetylase, histone deacetylase/acetoin utilization protein
[Brevibacillus sp. BC25]
gi|398035396|gb|EJL28640.1| deacetylase, histone deacetylase/acetoin utilization protein
[Brevibacillus sp. BC25]
Length = 385
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 115/272 (42%), Gaps = 28/272 (10%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
LIYSPDY + + HPF+ + +SS G L + I+ P A+ E+L +VH
Sbjct: 7 LIYSPDYTQYYFHDD--HPFNQRRLLLTHDLMSSYGILKDSDILTPRPATDEELALVHDP 64
Query: 97 SYLKSLQSSPN--------VSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKL 146
Y++ ++ + S + V F N ++ VGGT+ A A +
Sbjct: 65 RYIQFVRDQGHSEHELPQAASYGLGTEDVPCFSNMHEASSLI------VGGTLNAVDAVM 118
Query: 147 AKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGH 206
+ + A N GG HH GFC Y D S+ I Y N +RV+ ID DAH G+G
Sbjct: 119 SGQAEHAFNPAGGLHHAFRGRASGFCIYNDCSVAIAYLRKNWN-ARVLYIDTDAHHGDGV 177
Query: 207 EKDFSSDSRVYILDMFNPGIY---------PRDYEARRFIDQKVEVVSGTTTNEYLKKLD 257
+ F D V + + G Y R + V + + T + +L+ +
Sbjct: 178 QWAFYDDPHVLTVSIHETGKYLFPGTGNLSERGDGSGYGYSVNVPLDAFTEDDSFLEVYE 237
Query: 258 EALEVAGHTFDPELVIYNAGTDILEGDPLGML 289
E + F P++++ G D DPL L
Sbjct: 238 ELVSKLAAGFKPDVILTQNGCDAHAYDPLTHL 269
>gi|375105538|ref|ZP_09751799.1| deacetylase, histone deacetylase/acetoin utilization protein
[Burkholderiales bacterium JOSHI_001]
gi|374666269|gb|EHR71054.1| deacetylase, histone deacetylase/acetoin utilization protein
[Burkholderiales bacterium JOSHI_001]
Length = 314
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 104/224 (46%), Gaps = 23/224 (10%)
Query: 79 IVEPLEASKEDLLVVHSESYLKS-LQSSPNVSIIIEVPPVALFP--NCLVQRKVLYPFRK 135
I+E A++ +L + H Y+ L+ + + + E+ FP + QR V +
Sbjct: 40 ILEAPAATEGELALAHDPGYIDGVLRGTLSTAAQREIG----FPWSERMAQRAV-----R 90
Query: 136 QVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNIS---- 191
VG TI AA+ A G A GG HH + +G G+C + D+++ + +
Sbjct: 91 SVGATIAAARAALAEGVAAQTAGGTHHAYSFKGSGYCVFNDVAVAARLMQAETHRRHKRG 150
Query: 192 -RVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTN 250
RV++IDLD HQGNG F D V+ M +P EA D VE+ G +
Sbjct: 151 LRVLVIDLDVHQGNGTAAIFRDDESVFTFSMHGARNFPFRKEAS---DLDVELPDGCSDE 207
Query: 251 EYLKKLDEAL-EVAGHTFD--PELVIYNAGTDILEGDPLGMLKV 291
YL LD AL VA D P L Y AG D EGD LG LK+
Sbjct: 208 PYLAALDHALASVAARLADRPPGLAFYLAGADPHEGDRLGRLKL 251
>gi|258653919|ref|YP_003203075.1| histone deacetylase [Nakamurella multipartita DSM 44233]
gi|258557144|gb|ACV80086.1| Histone deacetylase [Nakamurella multipartita DSM 44233]
Length = 393
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 106/256 (41%), Gaps = 25/256 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HP +W G LD ++ P A L VH+ Y+++++++
Sbjct: 21 HPLHPLRWDLTWALAGELGVLDDYEVLVPEVADDAALGRVHTAGYIEAVRAASGPV---- 76
Query: 114 VPPVALFPNCLVQRKVLYPFRKQ-----VGGTILAAKLAKER--GWAINVGGGFHHCSAD 166
P+A+ ++P + GG+I AA+ R A+N GG HH D
Sbjct: 77 --PMAVGHGLGTDDNPIFPGMHENAALIAGGSIDAARAIAHREVDRAVNFCGGLHHAMPD 134
Query: 167 EGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN--- 223
GFC Y D++L I A + ++R+ ID+DAH G+G + F D RV + +
Sbjct: 135 HASGFCVYNDVALGI-TAMLDAGVNRIAYIDVDAHHGDGVQAAFYDDPRVLTISLHESPL 193
Query: 224 ---PGI-YPRDYEARRFIDQKVEVV--SGTTTNEYLKKLDEALEVAGHTFDPELVIYNAG 277
PG +P + V V GT +L+ + F PE+++ G
Sbjct: 194 TLFPGTGWPTELGVGAASGTAVNVALSPGTGDAAWLRAFHAVVPGVVRAFRPEVLVTQQG 253
Query: 278 TDILEGDPLG--MLKV 291
TD DPL ML V
Sbjct: 254 TDAHREDPLADLMLTV 269
>gi|441502435|ref|ZP_20984446.1| histone deacetylase superfamily [Photobacterium sp. AK15]
gi|441430182|gb|ELR67633.1| histone deacetylase superfamily [Photobacterium sp. AK15]
Length = 307
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 107/253 (42%), Gaps = 13/253 (5%)
Query: 42 DYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS 101
DY + +G + HP + G I +L+S ++ + A+ E L VH Y++
Sbjct: 10 DYLLHSMG--EQHPECPERLGAITSYLASTELGNQVTWLSAESATNEQLERVHPADYIRR 67
Query: 102 LQS-SPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKL---AKERGWAINVG 157
L S P ++ P AL P+ ++ R G +A +L K V
Sbjct: 68 LDSMQPQRGLVYADPDTALNPH------TMHAARLAAGAVTMATELVLSGKISNAFCAVR 121
Query: 158 GGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVY 217
HH + GFC + +I++ + A I RV I+D D H NG F V
Sbjct: 122 PPGHHAEHNTAMGFCFFNNIAVGVEQALTHYEIERVAILDFDVHHCNGTVDAFKDRPEVL 181
Query: 218 ILDMFNPGIYP-RDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNA 276
+ F YP R Y+ +R + +GTT ++ +++ A H P+++ +A
Sbjct: 182 VCSTFQHPFYPLRYYDIQRPNIVNSPLRAGTTGYQFRNVIEQDWLPALHYHQPQMIFVSA 241
Query: 277 GTDILEGDPLGML 289
G D + DPLG L
Sbjct: 242 GFDAHKADPLGQL 254
>gi|423411542|ref|ZP_17388662.1| hypothetical protein IE1_00846 [Bacillus cereus BAG3O-2]
gi|423432671|ref|ZP_17409675.1| hypothetical protein IE7_04487 [Bacillus cereus BAG4O-1]
gi|401104867|gb|EJQ12835.1| hypothetical protein IE1_00846 [Bacillus cereus BAG3O-2]
gi|401115804|gb|EJQ23651.1| hypothetical protein IE7_04487 [Bacillus cereus BAG4O-1]
Length = 397
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 109/255 (42%), Gaps = 26/255 (10%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + I+ P A+ E++ VH+E Y+ + L+ S
Sbjct: 29 HPFNQLRVTLTYDLLQKGGFISPSQIISPRMATDEEIAYVHTEEYINAVKRAGEGKLEKS 88
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 89 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 142
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 143 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 201
Query: 224 PGIY---------PRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIY 274
G Y R V + + T +L+ ++ F P++++
Sbjct: 202 TGRYLFPGTGAVNERGQGNGYSYSFNVPLDAFTEDESFLESYRTVVKEVAAYFKPDIILT 261
Query: 275 NAGTDILEGDPLGML 289
G D DPL L
Sbjct: 262 QNGADAHYYDPLTHL 276
>gi|452201140|ref|YP_007481221.1| NAD-independent protein deacetylase AcuC [Bacillus thuringiensis
serovar thuringiensis str. IS5056]
gi|452106533|gb|AGG03473.1| NAD-independent protein deacetylase AcuC [Bacillus thuringiensis
serovar thuringiensis str. IS5056]
Length = 388
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 109/255 (42%), Gaps = 26/255 (10%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + I+ P A+ E++ VH+E Y+ + L+ S
Sbjct: 20 HPFNQLRVTLTYDLLQKGGFISPSQIISPRMATDEEIAYVHTEEYINAVKRAGEGNLEKS 79
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 80 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 133
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 134 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 192
Query: 224 PGIY---------PRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIY 274
G Y R V + + T +L+ ++ F P++++
Sbjct: 193 TGRYLFPGTGAVNERGQGNGYSYSFNVPLDAFTEDESFLESYRTVVKEVAAYFKPDIILT 252
Query: 275 NAGTDILEGDPLGML 289
G D DPL L
Sbjct: 253 QNGADAHYYDPLTHL 267
>gi|423584808|ref|ZP_17560895.1| hypothetical protein IIE_00220 [Bacillus cereus VD045]
gi|423631383|ref|ZP_17607130.1| hypothetical protein IK5_04233 [Bacillus cereus VD154]
gi|401235000|gb|EJR41473.1| hypothetical protein IIE_00220 [Bacillus cereus VD045]
gi|401263956|gb|EJR70072.1| hypothetical protein IK5_04233 [Bacillus cereus VD154]
Length = 397
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 109/255 (42%), Gaps = 26/255 (10%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + I+ P A+ E++ VH+E Y+ + L+ S
Sbjct: 29 HPFNQLRVTLTYDLLQKGGFISPSQIISPRMATDEEIAYVHTEEYINAVKRAGEGKLEKS 88
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 89 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 142
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 143 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 201
Query: 224 PGIY---------PRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIY 274
G Y R V + + T +L+ ++ F P++++
Sbjct: 202 TGRYLFPGTGAVNERGQGNGYSYSFNVPLDAFTEDESFLESYRTVVKEVAAYFKPDIILT 261
Query: 275 NAGTDILEGDPLGML 289
G D DPL L
Sbjct: 262 QNGADAHYYDPLTHL 276
>gi|365158548|ref|ZP_09354740.1| hypothetical protein HMPREF1014_00203 [Bacillus sp. 7_6_55CFAA_CT2]
gi|423438101|ref|ZP_17415082.1| hypothetical protein IE9_04282 [Bacillus cereus BAG4X12-1]
gi|363626421|gb|EHL77404.1| hypothetical protein HMPREF1014_00203 [Bacillus sp. 7_6_55CFAA_CT2]
gi|401119714|gb|EJQ27525.1| hypothetical protein IE9_04282 [Bacillus cereus BAG4X12-1]
Length = 397
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 109/255 (42%), Gaps = 26/255 (10%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + I+ P A+ E++ VH+E Y+ + L+ S
Sbjct: 29 HPFNQLRVTLTYDLLQKGGFISPSQIISPRMATDEEIAYVHTEEYINAVKRAGEGKLEKS 88
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 89 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 142
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 143 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 201
Query: 224 PGIY---------PRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIY 274
G Y R V + + T +L+ ++ F P++++
Sbjct: 202 TGRYLFPGTGAVNERGQGNGYSYSFNVPLDAFTEDESFLESYRTVVKEVAAYFKPDIILT 261
Query: 275 NAGTDILEGDPLGML 289
G D DPL L
Sbjct: 262 QNGADAHYYDPLTHL 276
>gi|226356660|ref|YP_002786400.1| histone deacetylase superfamily protein [Deinococcus deserti
VCD115]
gi|226318650|gb|ACO46646.1| putative histone deacetylase superfamily [Deinococcus deserti
VCD115]
Length = 303
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 73/158 (46%), Gaps = 3/158 (1%)
Query: 134 RKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRV 193
R+ GG++ A A GW N+ GG HH D GFC D ++ +A + RV
Sbjct: 95 RRAAGGSLAALHDALAVGWGGNLAGGTHHAFHDRAEGFCLVNDAAILTRFALDEGLARRV 154
Query: 194 MIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYL 253
++DLD HQGNG ++ + + L + YP E + + G T EYL
Sbjct: 155 AVVDLDVHQGNGTAALLRAEPQAFTLSIHGERNYPFRKEQSSL---DLGLGDGVTDAEYL 211
Query: 254 KKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ L A F P+L++Y AG D+L GD G +
Sbjct: 212 EVLRTRALPALDAFRPDLLLYLAGADVLAGDRFGRFAL 249
>gi|355694242|gb|AER99604.1| Histone deacetylase 8 [Mustela putorius furo]
Length = 387
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 113/263 (42%), Gaps = 21/263 (7%)
Query: 38 IYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSES 97
IYSP+Y + K+ + + + + + IV+P AS E++ H+++
Sbjct: 29 IYSPEYVSMCDSLAKV----PKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDA 84
Query: 98 YLKSLQ--SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGW--- 152
YL+ LQ S + L +C + + + VGG + A G
Sbjct: 85 YLQHLQKVSQEGDDDHPDSIEYGLVYDCPATEGI-FDYAAAVGGATITAAQCLIDGMCKV 143
Query: 153 AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212
AIN GG+HH DE GFC D L I ++ R++ +DLD H G+G E FS
Sbjct: 144 AINWSGGWHHAKKDEASGFCYLNDAVLGI--LRLRRKFDRILYVDLDLHHGDGVEDAFSF 201
Query: 213 DSRVYILDM--FNPGIYPRDYEAR-------RFIDQKVEVVSGTTTNEYLKKLDEALEVA 263
S+V + + F+PG +P + R+ V + G +Y + L+
Sbjct: 202 TSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYHICESVLKEV 261
Query: 264 GHTFDPELVIYNAGTDILEGDPL 286
F+P+ V+ G D + GDP+
Sbjct: 262 YIAFNPKAVVLQLGADTIAGDPM 284
>gi|152994674|ref|YP_001339509.1| histone deacetylase superfamily protein [Marinomonas sp. MWYL1]
gi|150835598|gb|ABR69574.1| histone deacetylase superfamily [Marinomonas sp. MWYL1]
Length = 307
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 108/241 (44%), Gaps = 7/241 (2%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSL-QSSPNVSIII 112
HP + G I L +D +E A++E LL+ H E+Y+ S+ +P +
Sbjct: 20 HPESPLRLGAIQNRLIMGQLMDFLRRLESDPATREQLLLAHDEAYVDSIFARAPEEGHVE 79
Query: 113 EVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGW-AINVGGGFHHCSADEGGGF 171
P + P+ L LY + L + + AI G HH D+ GF
Sbjct: 80 LEPETLMMPHTL--DAALYAAGSVIKAVDLVMTSEMDNAFCAIRPPG--HHAEYDKAMGF 135
Query: 172 CAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP-RD 230
C + +I++ YA + + RV I+D D H GNG E F +D +V + YP D
Sbjct: 136 CLFNNIAVGTRYAIEKYGLERVAIVDFDVHHGNGTEDIFKADPKVLYASSYQHPFYPYSD 195
Query: 231 YEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLK 290
A + + +G+ + + + E L A TF P+L++ +AG D + DP+G L+
Sbjct: 196 PGASHDNILHMPLEAGSGSEAFQTIMTEQLLPALDTFKPQLIMISAGFDAHKEDPMGQLR 255
Query: 291 V 291
+
Sbjct: 256 L 256
>gi|348570652|ref|XP_003471111.1| PREDICTED: histone deacetylase 8-like [Cavia porcellus]
Length = 387
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 98/222 (44%), Gaps = 17/222 (7%)
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQ--SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQ 136
IV+P AS E++ H+++YL+ LQ S + L +C + + +
Sbjct: 56 IVKPKVASMEEMATFHTDAYLQHLQMVSQEGDDDHPDSTEYGLGYDCPATEGI-FEYAAA 114
Query: 137 VGGTILAAKLAKERGW---AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRV 193
VGG + A G AIN GG+HH DE GFC D L I ++ R+
Sbjct: 115 VGGATITAAQCLIDGMCKVAINWPGGWHHAKKDEASGFCYLNDAVLGI--LRLRRKFDRI 172
Query: 194 MIIDLDAHQGNGHEKDFSSDSRVYILDM--FNPGIYPRDYE-------ARRFIDQKVEVV 244
+ +DLD H G+G E FS S+V + + F+PG +P + R+ V +
Sbjct: 173 LYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDMCDIGLGKGRYYSVNVPIQ 232
Query: 245 SGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPL 286
G Y + L+ F+P+ V+ G D + GDP+
Sbjct: 233 DGIQDERYYHICESVLKEVYQAFNPKAVVLQLGADTIAGDPM 274
>gi|148264343|ref|YP_001231049.1| histone deacetylase superfamily protein [Geobacter uraniireducens
Rf4]
gi|146397843|gb|ABQ26476.1| histone deacetylase superfamily [Geobacter uraniireducens Rf4]
Length = 385
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 118/281 (41%), Gaps = 36/281 (12%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLD----KNCIVEPLEASKED 89
K LIYSPD+ G E HPF ++ + + + G + C P+ ++E
Sbjct: 4 KSALIYSPDFSRYSYGAE--HPFKVQRYRLAYELIQAYGLTRIPGVRLCQSRPI--AEEQ 59
Query: 90 LLVVHSESYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQV--------GGTI 141
LL HS YL L+ P A F L + P K V GT+
Sbjct: 60 LLTFHSPDYLAQLKEFSTAE-----EPRADFRYGLGDTE--NPVFKGVYDWACLGTAGTV 112
Query: 142 LAAKLAKERGW--AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLD 199
AA+L E G+ A N+ GG+HH ++ GF D + I+ + RV+ +DLD
Sbjct: 113 EAARLVAEEGYDFAFNLAGGWHHAHRNKASGFSYLNDAVIAINVLLAKGK--RVVYLDLD 170
Query: 200 AHQGNGHEKDFSSDSRVYILDMFNPGIY-------PRDYEARRFIDQKVEV--VSGTTTN 250
AH G+G + F +V + + G+Y + A + + V + + T
Sbjct: 171 AHHGDGVQDAFYDSDQVLTISLHESGVYFFPGTGFENETGAGKGVGYSVNIPLLEHTDDA 230
Query: 251 EYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKV 291
Y+K DE FDP++++ G D DPL L++
Sbjct: 231 LYMKAFDEVAFPLIAAFDPDVLVTQVGADTFRTDPLTRLEI 271
>gi|152977032|ref|YP_001376549.1| histone deacetylase superfamily protein [Bacillus cytotoxicus NVH
391-98]
gi|152025784|gb|ABS23554.1| histone deacetylase superfamily [Bacillus cytotoxicus NVH 391-98]
Length = 388
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 110/255 (43%), Gaps = 26/255 (10%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GFL + ++ P A+ E++ ++H+E Y+ + L+ S
Sbjct: 20 HPFNQLRVTLTYDLLVKSGFLSPSQVIPPRMATDEEIALIHTEDYINAVKRAGEGHLEQS 79
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FP+ +L VGGT+ A A ++ + A+N+GGG HH
Sbjct: 80 IAMTYGLGTEDTPMFPHMHEASALL------VGGTLTAVDAVMSGKATCALNLGGGLHHG 133
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ I Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 134 FRGKASGFCIYNDSSIAIKYLQQKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 192
Query: 224 PGIY---------PRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIY 274
G Y R V + + T +L+ ++ F P++++
Sbjct: 193 TGRYLFPGTGAVNERGQGVGYSYSFNVPLDAFTEDESFLQSYRTVVKEVAAYFKPDIIVT 252
Query: 275 NAGTDILEGDPLGML 289
G D DPL L
Sbjct: 253 QNGADAHYYDPLTHL 267
>gi|410906835|ref|XP_003966897.1| PREDICTED: histone deacetylase 8-like [Takifugu rubripes]
Length = 378
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 121/267 (45%), Gaps = 21/267 (7%)
Query: 34 KLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVV 93
K+ ++SP+Y + + K+ ++ + + + L+ IV+P A+ E++
Sbjct: 16 KVAYVFSPEYIRTCDSLSKV----PNRASMVHSLIEAYELLEHMNIVKPELATIEEMAKF 71
Query: 94 HSESYLKSLQ--SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK---LAK 148
H++SYL+ L S + + L +C V + + + VGG L A L +
Sbjct: 72 HTDSYLEHLHKISQDGDNDDPQSADYGLGYDCPVVEGI-FDYAAAVGGATLTAAQSLLDQ 130
Query: 149 ERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEK 208
+ AIN GG+HH DE GFC D L I ++ RV+ +D+D H G+G E
Sbjct: 131 KCDVAINWSGGWHHAKKDEASGFCYVNDAVLGI--LRLREKYERVLYVDVDLHHGDGVED 188
Query: 209 DFSSDSRVYILDM--FNPGIYPRDYEA-------RRFIDQKVEVVSGTTTNEYLKKLDEA 259
FS S+V + + F+PG +P + R+ V + G + Y +
Sbjct: 189 AFSFTSKVMTVSLHKFSPGFFPGTGDVCDTGLGKGRWYAVNVPLEDGIKDDRYYQIFCSV 248
Query: 260 LEVAGHTFDPELVIYNAGTDILEGDPL 286
++ F+PE V+ G D + GDP+
Sbjct: 249 MQEVYAHFNPEAVVMQLGADTMAGDPM 275
>gi|423452027|ref|ZP_17428880.1| hypothetical protein IEE_00771 [Bacillus cereus BAG5X1-1]
gi|401142098|gb|EJQ49647.1| hypothetical protein IEE_00771 [Bacillus cereus BAG5X1-1]
Length = 397
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 108/255 (42%), Gaps = 26/255 (10%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + ++ P A+ E++ +H+E Y+ + L+ S
Sbjct: 29 HPFNQLRVTLTYDLLQKSGFISPSQVISPRMATDEEIAFIHTEEYINAVKLAGEGKLEKS 88
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 89 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 142
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 143 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 201
Query: 224 PGIY---------PRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIY 274
G Y R V + + T +L ++ F P++++
Sbjct: 202 TGRYLFPGTGAVNERGQGNGYSYSFNVPLDAFTEDESFLDSYRTVVKEVAEYFKPDIILT 261
Query: 275 NAGTDILEGDPLGML 289
G D DPL L
Sbjct: 262 QNGADAHYYDPLTHL 276
>gi|296535922|ref|ZP_06898074.1| DNA helicase RecG [Roseomonas cervicalis ATCC 49957]
gi|296263747|gb|EFH10220.1| DNA helicase RecG [Roseomonas cervicalis ATCC 49957]
Length = 377
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 108/246 (43%), Gaps = 11/246 (4%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HP + + + G+LD ++ A E+L H +Y+ +LQ + + E
Sbjct: 22 HPLAIPRVSTALDLIRALGWLDPARYIDSPMARPEELTRFHDPAYIAALQQAEALGQATE 81
Query: 114 VPPVALFPNCLVQRKVLYP--FRK---QVGGTILAAKLAKERGWAINVGGGFHHCSADEG 168
+ + + +Y FR+ GG +LAA+L E G GGG HH D
Sbjct: 82 A--MRARHDIGARGNPVYAEIFRRPATSAGGVLLAARLTAEGGAVHVPGGGTHHGRPDRA 139
Query: 169 GGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP 228
GFC D L + A+ + ++ +D+DAH G+G + F+ D RV+ + + G +P
Sbjct: 140 SGFCYLNDAVLGL-LAWCDQGLENILYLDIDAHHGDGVQDAFADDPRVFTVSVHEAGRWP 198
Query: 229 RD--YEARRFIDQK-VEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDP 285
+ E R + + V G +E+L L A+ P+ ++ G D LE DP
Sbjct: 199 QTGLLEDRAGGHARNLPVPQGLNDSEFLYLLHHAILPLIRHRRPQAIMLQCGADALEEDP 258
Query: 286 LGMLKV 291
L L +
Sbjct: 259 LAKLGL 264
>gi|359419320|ref|ZP_09211278.1| putative acetoin utilization protein [Gordonia araii NBRC 100433]
gi|358244727|dbj|GAB09347.1| putative acetoin utilization protein [Gordonia araii NBRC 100433]
Length = 418
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 114/258 (44%), Gaps = 31/258 (12%)
Query: 52 KLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQ------SS 105
+ HP + + S G LD + PL+ + L VVH+ +Y+ +++
Sbjct: 22 REHPMNPVRLALTMSLAGSLGVLDGVDPIPPLDIDDDLLRVVHTRNYIDAVREVGGPDGG 81
Query: 106 PNVSIIIEVPPVA-----LFPNCLVQRKVLYPFRKQVGGTILAAKL---AKERGWAINVG 157
PN ++ ++ + +FP ++L VGG++ AAK K R A+N+G
Sbjct: 82 PNKALYEQLYGLGDMDNPVFPGMHEAARML------VGGSVAAAKAIADGKVRR-AVNIG 134
Query: 158 GGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVY 217
GG HH GFC Y D ++ I + + R+ ID+DAH G+G E+ F+ D RV
Sbjct: 135 GGMHHAMPSRAAGFCVYNDCAVAIDW-LLGHGFDRIAYIDVDAHHGDGVERVFADDPRVL 193
Query: 218 ILDMFN------PGI-YPRDY--EARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFD 268
+ + PG +P + EA V ++ G + +L+ + F
Sbjct: 194 TVSLHQHPATLWPGTGWPTEIGGEAATGSAANVALMPGIVDSLWLRAFHAIVPSLIGEFA 253
Query: 269 PELVIYNAGTDILEGDPL 286
P++++ G D DPL
Sbjct: 254 PQIIVSQCGADSHRADPL 271
>gi|148682173|gb|EDL14120.1| histone deacetylase 8, isoform CRA_a [Mus musculus]
Length = 378
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 99/222 (44%), Gaps = 16/222 (7%)
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQ--SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQ 136
IV+P AS E++ H+++YL+ LQ S + L +C +
Sbjct: 56 IVKPKVASMEEMATFHTDAYLQHLQKVSQEGDEDHPDSIEYGLGYDCPATEGIFDYAAAI 115
Query: 137 VGGTILAAK--LAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVM 194
GGTI AA+ + + AIN GG+HH DE GFC D L I ++ R++
Sbjct: 116 GGGTITAAQCLIDGKCKVAINWSGGWHHAKKDEASGFCYLNDAVLGI--LRLRRKFDRIL 173
Query: 195 IIDLDAHQGNGHEKDFSSDSRVYILDM--FNPGIYPRD--------YEARRFIDQKVEVV 244
+DLD H G+G E FS S+V + + F+PG +P R+ V +
Sbjct: 174 YVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGKTGDMSDVGLGKGRYYSVNVPIQ 233
Query: 245 SGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPL 286
G +Y + L+ F+P+ V+ G D + GDP+
Sbjct: 234 DGIQDEKYYHICESVLKEVYQAFNPKAVVLQLGADTIAGDPM 275
>gi|341884216|gb|EGT40151.1| hypothetical protein CAEBREN_23214 [Caenorhabditis brenneri]
Length = 1054
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 142/321 (44%), Gaps = 44/321 (13%)
Query: 4 SSSPSVTTDAETLKRNRILSSKLYF--DIPIFKL-PLIYSPDYDISFLGIEK--LHPFDS 58
SS P T E L+ N ++S KL D+P +L +IY + D + +E+ HP
Sbjct: 395 SSRPPDT--GEILQEN-LMSIKLKASDDLPSDELETIIYFNEGDDAHHDLEEEDRHPEKP 451
Query: 59 SKWGRICQFLSSEGFLDKNCIVEPLE--ASKEDLLVVHSES---YLKSLQSSPNVSIIIE 113
++ RI + L G LD+ C+ E A+ E++ +VH++ +LK+ +S ++ E
Sbjct: 452 ARTRRILKTLKESGVLDR-CVERNSERSATDEEIRMVHTKKMLDHLKTTESMKEEELMEE 510
Query: 114 VPPVALFPNCLVQRKVLYPFRKQVGGTILAA-----KLAKERGWAINVGGGFHHCSADEG 168
F + + + L RK +G + + K A R + V HH SA +
Sbjct: 511 A--QKEFNSIFLTQDTLKVARKAIGAVLQSVDEIFEKPAGLRNALVIVRPPGHHASASKS 568
Query: 169 GGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDM------- 221
GFC + ++++ YA + I RV+I+D D H GNG ++ F D V + +
Sbjct: 569 SGFCIFNNVAVAAKYAQRRHKIKRVLILDWDVHHGNGTQEIFYEDGNVMYMSIHRHDKGN 628
Query: 222 FNPGIYPRDYEARRFIDQKVEVVSGTTTN-----------EYLKKLDEALEVAGHTFDPE 270
F P P+DY D G T N EY + + F PE
Sbjct: 629 FYPVGEPKDY-----FDVGEGDGEGMTVNIPFSGAPMGDLEYQMAFQRVVLPIAYQFKPE 683
Query: 271 LVIYNAGTDILEGDPLGMLKV 291
LV+ +AG D DPLG KV
Sbjct: 684 LVLISAGFDAAIDDPLGEYKV 704
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 107/261 (40%), Gaps = 34/261 (13%)
Query: 52 KLHPFDSSKWGRICQFLSSEGFLDK-NCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSI 110
K HP + I + L+ L+K + + LE DL + H + + L N +
Sbjct: 32 KNHPESPGRIQSIKEVLTKTKVLEKCQVVTDFLEIDDADLSITHEKEMIAKLMEIENKTQ 91
Query: 111 IIEVPPVALFPNCLVQRKVLYPFR------KQVGGTILAAKLAKERGWAINVGGGFHHCS 164
F + + K R +++ I+A + + G+AI G HH
Sbjct: 92 EEINKECENFDSIYMTEKSQKAARDGVACVRELTNRIMANEASN--GFAIIRPPG-HHAD 148
Query: 165 ADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDM--F 222
D GFC Y + S AF R++I+DLD H GNG ++ F D RV + + +
Sbjct: 149 RDNPSGFCIYNNASQAAEEAFFN-GAERILIVDLDVHHGNGTQRMFYHDKRVLVFSIHRY 207
Query: 223 NPGIY-PR---------------DYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHT 266
G+Y P Y A ++++ G T ++YL L L
Sbjct: 208 EHGLYWPHLRESNFDRIGSGQGIGYNANLPLNEE-----GCTDSDYLSILFHVLLPLATQ 262
Query: 267 FDPELVIYNAGTDILEGDPLG 287
FDP VI +AG D L GDPLG
Sbjct: 263 FDPHFVIVSAGFDSLAGDPLG 283
>gi|423440595|ref|ZP_17417501.1| hypothetical protein IEA_00925 [Bacillus cereus BAG4X2-1]
gi|423449256|ref|ZP_17426135.1| hypothetical protein IEC_03864 [Bacillus cereus BAG5O-1]
gi|423463659|ref|ZP_17440427.1| hypothetical protein IEK_00846 [Bacillus cereus BAG6O-1]
gi|423533012|ref|ZP_17509430.1| hypothetical protein IGI_00844 [Bacillus cereus HuB2-9]
gi|423541725|ref|ZP_17518116.1| hypothetical protein IGK_03817 [Bacillus cereus HuB4-10]
gi|423622255|ref|ZP_17598033.1| hypothetical protein IK3_00853 [Bacillus cereus VD148]
gi|401128705|gb|EJQ36394.1| hypothetical protein IEC_03864 [Bacillus cereus BAG5O-1]
gi|401171258|gb|EJQ78491.1| hypothetical protein IGK_03817 [Bacillus cereus HuB4-10]
gi|401261395|gb|EJR67555.1| hypothetical protein IK3_00853 [Bacillus cereus VD148]
gi|402418726|gb|EJV51015.1| hypothetical protein IEA_00925 [Bacillus cereus BAG4X2-1]
gi|402421203|gb|EJV53463.1| hypothetical protein IEK_00846 [Bacillus cereus BAG6O-1]
gi|402464392|gb|EJV96087.1| hypothetical protein IGI_00844 [Bacillus cereus HuB2-9]
Length = 397
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 109/255 (42%), Gaps = 26/255 (10%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + I+ P A+ E++ VH+E Y+ + L+ S
Sbjct: 29 HPFNQLRVTLTYDLLQKGGFISPSQIISPRMATDEEIAYVHTEEYIHAVKRAGEGKLEKS 88
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 89 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 142
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 143 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 201
Query: 224 PGIY---------PRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIY 274
G Y R V + + T +L+ ++ F P++++
Sbjct: 202 TGRYLFPGTGAVNERGQGNGYSYSFNVPLDAFTEDESFLESYRTVVKEVAAYFKPDIILT 261
Query: 275 NAGTDILEGDPLGML 289
G D DPL L
Sbjct: 262 QNGADAHYYDPLTHL 276
>gi|423386180|ref|ZP_17363436.1| hypothetical protein ICE_03926 [Bacillus cereus BAG1X1-2]
gi|423527484|ref|ZP_17503929.1| hypothetical protein IGE_01036 [Bacillus cereus HuB1-1]
gi|401634831|gb|EJS52594.1| hypothetical protein ICE_03926 [Bacillus cereus BAG1X1-2]
gi|402452853|gb|EJV84663.1| hypothetical protein IGE_01036 [Bacillus cereus HuB1-1]
Length = 397
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 109/255 (42%), Gaps = 26/255 (10%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + I+ P A+ E++ VH+E Y+ + L+ S
Sbjct: 29 HPFNQLRVTLTYDLLQKGGFISPSQIITPRMATDEEIAYVHTEEYINAVKRAGEGKLEKS 88
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 89 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 142
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 143 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 201
Query: 224 PGIY---------PRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIY 274
G Y R V + + T +L+ ++ F P++++
Sbjct: 202 TGRYLFPGTGAVNERGQGNGYSYSFNVPLDAFTEDESFLESYRTVVKEVAAYFKPDIILT 261
Query: 275 NAGTDILEGDPLGML 289
G D DPL L
Sbjct: 262 QNGADAHYYDPLTHL 276
>gi|344282018|ref|XP_003412772.1| PREDICTED: histone deacetylase 8-like [Loxodonta africana]
Length = 377
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 103/222 (46%), Gaps = 17/222 (7%)
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQ--SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQ 136
IV+P AS E++ H+++YL+ LQ S + L +C + Y +
Sbjct: 56 IVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYDCPATEGI-YDYAAA 114
Query: 137 VGG-TILAAK--LAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRV 193
+GG TI AA+ + + AIN GG+HH DE GFC D L I ++ R+
Sbjct: 115 IGGATITAAQCLIDGKCKVAINWSGGWHHAKKDEASGFCYLNDAVLGI--LRLRRKFDRI 172
Query: 194 MIIDLDAHQGNGHEKDFSSDSRVYILDM--FNPGIYPRDYEAR-------RFIDQKVEVV 244
+ +DLD H G+G E FS S+V + + F+PG +P + R+ V +
Sbjct: 173 LYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQ 232
Query: 245 SGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPL 286
G +Y + L+ F+P+ V+ G D + GDP+
Sbjct: 233 DGIQDEKYYHICESVLKEVYVAFNPKAVVLQLGADTIAGDPM 274
>gi|221633525|ref|YP_002522750.1| hdac6 protein [Thermomicrobium roseum DSM 5159]
gi|221155670|gb|ACM04797.1| hdac6 protein [Thermomicrobium roseum DSM 5159]
Length = 368
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 102/249 (40%), Gaps = 18/249 (7%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HP + R Q +++ G L+ +V A++++L H+ Y+ +Q
Sbjct: 34 HPSSARIIRRTAQLIAASGLLEGALVVAARPATEDELTAYHTPEYIAHVQQVTKSGGGWL 93
Query: 114 VPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCA 173
P + P + ++ +LA + + G G HH D+G GFC
Sbjct: 94 DPETPVVPGSWEAALLAAGAAIELTDVVLAGRASCAFGLLRPPG---HHAMRDQGMGFCV 150
Query: 174 YADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEA 233
+ ++ L +A + + R+M++D D H GNG + F D V + + YP + A
Sbjct: 151 FNNVVLATRHA-QRRGVQRIMVLDWDVHHGNGTQAAFWDDPSVLFVSLHQDNWYPEGWGA 209
Query: 234 RRFIDQ-----------KVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILE 282
+DQ + + GT YL L+ + F PE++ +AG D
Sbjct: 210 ---VDQIGGPDSEGTTVNIPLPPGTGNRGYLAALERIVVPIARQFRPEMIFVSAGQDASM 266
Query: 283 GDPLGMLKV 291
DPLG + V
Sbjct: 267 EDPLGRMLV 275
>gi|336476702|ref|YP_004615843.1| histone deacetylase [Methanosalsum zhilinae DSM 4017]
gi|335930083|gb|AEH60624.1| Histone deacetylase [Methanosalsum zhilinae DSM 4017]
Length = 340
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 117/267 (43%), Gaps = 27/267 (10%)
Query: 37 LIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96
+IY PD S HP +S+ I L G + N +V P A + VH
Sbjct: 4 IIYHPD---SLKHNTGWHPESASRLKAIMDKLEENGIFEDNPLVIPQYADLSLIENVHDL 60
Query: 97 SYLKSLQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINV 156
Y+KS++ + E+P L P+ +V R GG + A +L + G A +
Sbjct: 61 DYIKSVEEH----CMREIP---LDPDTVVSRDSFNAALASAGGAVKATELVLDEGLAFAL 113
Query: 157 GGG-FHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSR 215
HH + GFC + +I++ YA + R++I+D D H GNG ++ F SD
Sbjct: 114 TRPPGHHAGYRKARGFCLFNNIAIAARYAQSR-GFERILIVDWDVHHGNGTQEIFYSDPG 172
Query: 216 VYILDMFNPGIYPR-----------DYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAG 264
V F+ +YP D +A+ F + V + G ++Y+ + L
Sbjct: 173 VL---YFSTHLYPWFPGTGWLDEIGDGDAQGF-NINVPLPPGLNNSDYIYIFKKLLLPIS 228
Query: 265 HTFDPELVIYNAGTDILEGDPLGMLKV 291
FDP++++ +AG D DPLG + +
Sbjct: 229 LQFDPQMIMVSAGMDSYSRDPLGNMNI 255
>gi|423377489|ref|ZP_17354773.1| hypothetical protein IC9_00842 [Bacillus cereus BAG1O-2]
gi|401638338|gb|EJS56088.1| hypothetical protein IC9_00842 [Bacillus cereus BAG1O-2]
Length = 397
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 109/255 (42%), Gaps = 26/255 (10%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + I+ P A+ E++ VH+E Y+ + L+ S
Sbjct: 29 HPFNQLRVTLTYDLLQKGGFISPSQIISPRMATDEEIAYVHTEEYINAVKCAGEGKLEKS 88
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 89 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 142
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 143 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 201
Query: 224 PGIY---------PRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIY 274
G Y R V + + T +L+ ++ F P++++
Sbjct: 202 TGRYLFPGTGAVNERGQGNGYSYSFNVPLDAFTEDESFLESYRTVVKEVAAYFKPDIILT 261
Query: 275 NAGTDILEGDPLGML 289
G D DPL L
Sbjct: 262 QNGADAHYYDPLTHL 276
>gi|206969663|ref|ZP_03230617.1| acetoin utilization protein AcuC [Bacillus cereus AH1134]
gi|206735351|gb|EDZ52519.1| acetoin utilization protein AcuC [Bacillus cereus AH1134]
Length = 388
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 109/255 (42%), Gaps = 26/255 (10%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + I+ P A+ E++ +H+E Y+ + L+ S
Sbjct: 20 HPFNQLRVTLTYDLLQKGGFISPSQIISPRMATDEEIAYIHTEEYINAVKRAGEGKLEKS 79
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 80 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 133
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 134 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 192
Query: 224 PGIY---------PRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIY 274
G Y R V + + T +L+ ++ F P++++
Sbjct: 193 TGRYLFPGTGAVNERGQGNGYSYSFNVPLDAFTEDESFLESYRTVVKEVAAYFKPDIILT 252
Query: 275 NAGTDILEGDPLGML 289
G D DPL L
Sbjct: 253 QNGADAHYYDPLTHL 267
>gi|410677064|ref|YP_006929435.1| acetoin utilization protein AcuB [Bacillus thuringiensis Bt407]
gi|409176193|gb|AFV20498.1| acetoin utilization protein AcuB [Bacillus thuringiensis Bt407]
Length = 397
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 109/255 (42%), Gaps = 26/255 (10%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + I+ P A+ E++ VH+E Y+ + L+ S
Sbjct: 29 HPFNQLRVTLTYDLLQKGGFISPSQIISPRMATDEEIAYVHTEEYINAVKRAGEGNLEKS 88
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 89 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 142
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 143 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 201
Query: 224 PGIY---------PRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIY 274
G Y R V + + T +L+ ++ F P++++
Sbjct: 202 TGRYLFPGTGAVNERGQGNGYSYSFNVPLDAFTEDESFLESYRTVVKEVAAYFKPDIILT 261
Query: 275 NAGTDILEGDPLGML 289
G D DPL L
Sbjct: 262 QNGADAHYYDPLTHL 276
>gi|341894557|gb|EGT50492.1| hypothetical protein CAEBREN_16084 [Caenorhabditis brenneri]
Length = 1061
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 142/321 (44%), Gaps = 44/321 (13%)
Query: 4 SSSPSVTTDAETLKRNRILSSKLYF--DIPIFKL-PLIYSPDYDISFLGIEK--LHPFDS 58
SS P T E L+ N ++S KL D+P +L +IY + D + +E+ HP
Sbjct: 402 SSRPPDT--GEILQEN-LMSIKLKASDDLPSDELETIIYFNEGDDAHHDLEEEDRHPEKP 458
Query: 59 SKWGRICQFLSSEGFLDKNCIVEPLE--ASKEDLLVVHSES---YLKSLQSSPNVSIIIE 113
++ RI + L G LD+ C+ E A+ E++ +VH++ +LK+ +S ++ E
Sbjct: 459 ARTRRILKTLKESGVLDR-CVERNSERSATDEEIRMVHTKKMLDHLKTTESMKEEELMEE 517
Query: 114 VPPVALFPNCLVQRKVLYPFRKQVGGTILAA-----KLAKERGWAINVGGGFHHCSADEG 168
F + + + L RK +G + + K A R + V HH SA +
Sbjct: 518 A--QKEFNSIFLTQDTLKVARKAIGAVLQSVDEIFEKPAGLRNALVIVRPPGHHASASKS 575
Query: 169 GGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDM------- 221
GFC + ++++ YA + I RV+I+D D H GNG ++ F D V + +
Sbjct: 576 SGFCIFNNVAVAAKYAQRRHKIKRVLILDWDVHHGNGTQEIFYEDGNVMYMSIHRHDKGN 635
Query: 222 FNPGIYPRDYEARRFIDQKVEVVSGTTTN-----------EYLKKLDEALEVAGHTFDPE 270
F P P+DY D G T N EY + + F PE
Sbjct: 636 FYPVGEPKDY-----FDVGEGDGEGMTVNIPFSGAPMGDLEYQMAFQRVVLPIAYQFKPE 690
Query: 271 LVIYNAGTDILEGDPLGMLKV 291
LV+ +AG D DPLG KV
Sbjct: 691 LVLISAGFDAAIDDPLGEYKV 711
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 107/261 (40%), Gaps = 34/261 (13%)
Query: 52 KLHPFDSSKWGRICQFLSSEGFLDK-NCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSI 110
K HP + I + L+ L+K + + LE DL + H + + L N +
Sbjct: 32 KDHPESPGRIQSIKEVLTKTKVLEKCQVVTDFLEIDDADLSITHEKEMIAKLMEIENKTQ 91
Query: 111 IIEVPPVALFPNCLVQRKVLYPFR------KQVGGTILAAKLAKERGWAINVGGGFHHCS 164
F + + K R +++ I+A + + G+AI G HH
Sbjct: 92 EEINKECEKFDSIYMTEKSQKAARDGVACVRELTNRIMANEASN--GFAIIRPPG-HHAD 148
Query: 165 ADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDM--F 222
D GFC Y + S AF R++I+DLD H GNG ++ F D RV + + +
Sbjct: 149 RDNPSGFCIYNNASQAAEEAFFN-GAERILIVDLDVHHGNGTQRMFYHDKRVLVFSIHRY 207
Query: 223 NPGIY-PR---------------DYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHT 266
G+Y P Y A ++++ G T ++YL L L
Sbjct: 208 EHGLYWPHLRESNFDRIGSGQGIGYNANLPLNEE-----GCTDSDYLSILFHVLLPLATQ 262
Query: 267 FDPELVIYNAGTDILEGDPLG 287
FDP VI +AG D L GDPLG
Sbjct: 263 FDPHFVIVSAGFDSLAGDPLG 283
>gi|423470868|ref|ZP_17447612.1| hypothetical protein IEM_02174 [Bacillus cereus BAG6O-2]
gi|423557758|ref|ZP_17534060.1| hypothetical protein II3_02962 [Bacillus cereus MC67]
gi|401192295|gb|EJQ99311.1| hypothetical protein II3_02962 [Bacillus cereus MC67]
gi|402434606|gb|EJV66644.1| hypothetical protein IEM_02174 [Bacillus cereus BAG6O-2]
Length = 397
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 108/255 (42%), Gaps = 26/255 (10%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + ++ P A+ E++ +H+E Y+ + L+ S
Sbjct: 29 HPFNQLRVTLTYDLLQKSGFISPSQVISPRMATDEEIAFIHTEEYINAVKLAGEGKLEKS 88
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 89 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 142
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 143 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 201
Query: 224 PGIY---------PRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIY 274
G Y R V + + T +L ++ F P++++
Sbjct: 202 TGRYLFPGTGAVNERGQGNGYSYSFNVPLDAFTEDESFLDSYRTVVKEVAEYFKPDIILT 261
Query: 275 NAGTDILEGDPLGML 289
G D DPL L
Sbjct: 262 QNGADAHYYDPLTHL 276
>gi|417410448|gb|JAA51697.1| Putative histone deacetylase complex catalytic component rpd3,
partial [Desmodus rotundus]
Length = 404
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 99/222 (44%), Gaps = 17/222 (7%)
Query: 79 IVEPLEASKEDLLVVHSESYLKSLQ--SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQ 136
IV+P AS E++ H+++YL+ LQ S + L +C + + +
Sbjct: 83 IVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYDCPATEGI-FDYAAA 141
Query: 137 VGGTILAAKLAKERGW---AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRV 193
VGG + A G AIN GG+HH DE GFC D+ L I ++ R+
Sbjct: 142 VGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDVVLGI--LRLRRKFDRI 199
Query: 194 MIIDLDAHQGNGHEKDFSSDSRVYILDM--FNPGIYPRDYEAR-------RFIDQKVEVV 244
+ +DLD H G+G E FS S V + + F+PG +P + R+ V +
Sbjct: 200 LYVDLDLHHGDGVEDAFSFTSTVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQ 259
Query: 245 SGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPL 286
G +Y + L+ F+P+ V+ G D + GDP+
Sbjct: 260 DGIQDEKYYHIYESVLKEVYIAFNPKAVVLQLGADTIAGDPM 301
>gi|154337098|ref|XP_001564782.1| putative histone deacetylase [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134061820|emb|CAM38854.1| putative histone deacetylase [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 432
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 122/269 (45%), Gaps = 23/269 (8%)
Query: 39 YSPDYDIS-FLGIEKLHPFDSSKWGRICQFLSSEGFLDKNC--IVEPLEASKEDLLVVHS 95
Y+ D +IS F+ + P+ I + L +D +C +V PL E+L+ H+
Sbjct: 30 YASDMNISAFVPQHAMKPYRVLAAMEIVRKLK----IDAHCRTVVPPL-VKVEELMAYHT 84
Query: 96 ESYLKSLQSSPNVSII--IEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKL--AKERG 151
++YL +L S + E V +C ++ GT++ A L + +
Sbjct: 85 DTYLANLGVHSCRSWLWNAETSKVFFSGDCPPVEGLMEHSIATASGTLMGAVLLNSGQVD 144
Query: 152 WAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFS 211
A++ GGG HH E GFC DI L I ++ + RV+ ID+D H G+G ++ F
Sbjct: 145 VAVHWGGGMHHSKCGECSGFCYVNDIVLGI-LELLKCH-DRVLYIDIDMHHGDGVDEAFC 202
Query: 212 SDSRVYILDM------FNPGI-YPRD--YEARRFIDQKVEVVSGTTTNEYLKKLDEALEV 262
R++ L + F PG +PRD Y R+ + V G T YL AL
Sbjct: 203 RSDRIFTLSLHKFGESFFPGTGHPRDVGYGRGRYYSMNLAVWDGITDFFYLGLFKHALHS 262
Query: 263 AGHTFDPELVIYNAGTDILEGDPLGMLKV 291
+ P++++ G D L GD LG+L +
Sbjct: 263 IVRRYSPDVIVLQCGADSLAGDRLGLLNL 291
>gi|423400479|ref|ZP_17377652.1| hypothetical protein ICW_00877 [Bacillus cereus BAG2X1-2]
gi|423457084|ref|ZP_17433881.1| hypothetical protein IEI_00224 [Bacillus cereus BAG5X2-1]
gi|423478815|ref|ZP_17455530.1| hypothetical protein IEO_04273 [Bacillus cereus BAG6X1-1]
gi|401148861|gb|EJQ56344.1| hypothetical protein IEI_00224 [Bacillus cereus BAG5X2-1]
gi|401655203|gb|EJS72737.1| hypothetical protein ICW_00877 [Bacillus cereus BAG2X1-2]
gi|402426846|gb|EJV58961.1| hypothetical protein IEO_04273 [Bacillus cereus BAG6X1-1]
Length = 397
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 108/255 (42%), Gaps = 26/255 (10%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSS 105
HPF+ + L GF+ + I+ P A+ E++ VH+E Y+ + L+ S
Sbjct: 29 HPFNQLRVTLTYDLLQKGGFISPSQIISPRMATDEEIAYVHTEEYINAVKRAGEGKLEKS 88
Query: 106 PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGFHHC 163
++ + +FPN +L VGGT+ A A L+ + A+N+GGG HH
Sbjct: 89 IAMTYGLGTEDTPMFPNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLHHG 142
Query: 164 SADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFN 223
+ GFC Y D S+ + Y + + RV+ ID DAH G+G + F D V + +
Sbjct: 143 FRGKASGFCIYNDSSIAMKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHE 201
Query: 224 PGIY---------PRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIY 274
G Y R V + + T +L ++ F P++++
Sbjct: 202 TGRYLFPGTGAVNERGQGNGYSYSFNVPLDAFTEDESFLNSYRTVVKEVAAYFKPDIILT 261
Query: 275 NAGTDILEGDPLGML 289
G D DPL L
Sbjct: 262 QNGADAHYYDPLTHL 276
>gi|49483975|ref|YP_041199.1| histone deacetylase [Staphylococcus aureus subsp. aureus MRSA252]
gi|257425848|ref|ZP_05602272.1| histone deacetylase [Staphylococcus aureus subsp. aureus 55/2053]
gi|257428515|ref|ZP_05604913.1| histone deacetylase [Staphylococcus aureus subsp. aureus 65-1322]
gi|257431148|ref|ZP_05607525.1| histone deacetylase [Staphylococcus aureus subsp. aureus 68-397]
gi|257433830|ref|ZP_05610188.1| histone deacetylase [Staphylococcus aureus subsp. aureus E1410]
gi|257436747|ref|ZP_05612791.1| histone deacetylase [Staphylococcus aureus subsp. aureus M876]
gi|282904304|ref|ZP_06312192.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus C160]
gi|282906129|ref|ZP_06313984.1| acetoin utilization protein acuC [Staphylococcus aureus subsp.
aureus Btn1260]
gi|282909045|ref|ZP_06316863.1| histone deacetylase [Staphylococcus aureus subsp. aureus WW2703/97]
gi|282911360|ref|ZP_06319162.1| histone deacetylase [Staphylococcus aureus subsp. aureus WBG10049]
gi|282914529|ref|ZP_06322315.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus M899]
gi|282919497|ref|ZP_06327232.1| acetoin utilization protein acuC [Staphylococcus aureus subsp.
aureus C427]
gi|282924875|ref|ZP_06332541.1| acetoin utilization protein acuC [Staphylococcus aureus subsp.
aureus C101]
gi|283958483|ref|ZP_06375934.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus A017934/97]
gi|293503607|ref|ZP_06667454.1| acetoin utilization protein acuC [Staphylococcus aureus subsp.
aureus 58-424]
gi|293510623|ref|ZP_06669328.1| acetoin utilization protein acuC [Staphylococcus aureus subsp.
aureus M809]
gi|293537164|ref|ZP_06671844.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus M1015]
gi|295428305|ref|ZP_06820934.1| acetoin utilization protein acuC [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297590732|ref|ZP_06949370.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus MN8]
gi|384867304|ref|YP_005747500.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus TCH60]
gi|415682541|ref|ZP_11447857.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus CGS00]
gi|417889376|ref|ZP_12533466.1| histone deacetylase family [Staphylococcus aureus subsp. aureus
21195]
gi|418564576|ref|ZP_13128997.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus 21264]
gi|418582665|ref|ZP_13146741.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIG1605]
gi|418595345|ref|ZP_13158963.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus 21342]
gi|418602071|ref|ZP_13165485.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus 21345]
gi|418892471|ref|ZP_13446583.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIG1176]
gi|418898371|ref|ZP_13452440.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIGC341D]
gi|418901243|ref|ZP_13455298.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIG1214]
gi|418909591|ref|ZP_13463585.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIG149]
gi|418917638|ref|ZP_13471596.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIG1267]
gi|418923424|ref|ZP_13477339.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIG1233]
gi|418982748|ref|ZP_13530455.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIG1242]
gi|418986413|ref|ZP_13534096.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIG1500]
gi|81650911|sp|Q6GFX3.1|ACUC_STAAR RecName: Full=Acetoin utilization protein AcuC
gi|49242104|emb|CAG40804.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus MRSA252]
gi|257271542|gb|EEV03688.1| histone deacetylase [Staphylococcus aureus subsp. aureus 55/2053]
gi|257275356|gb|EEV06843.1| histone deacetylase [Staphylococcus aureus subsp. aureus 65-1322]
gi|257278096|gb|EEV08744.1| histone deacetylase [Staphylococcus aureus subsp. aureus 68-397]
gi|257281923|gb|EEV12060.1| histone deacetylase [Staphylococcus aureus subsp. aureus E1410]
gi|257284098|gb|EEV14221.1| histone deacetylase [Staphylococcus aureus subsp. aureus M876]
gi|282313241|gb|EFB43637.1| acetoin utilization protein acuC [Staphylococcus aureus subsp.
aureus C101]
gi|282317307|gb|EFB47681.1| acetoin utilization protein acuC [Staphylococcus aureus subsp.
aureus C427]
gi|282321710|gb|EFB52035.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus M899]
gi|282325055|gb|EFB55365.1| histone deacetylase [Staphylococcus aureus subsp. aureus WBG10049]
gi|282327309|gb|EFB57604.1| histone deacetylase [Staphylococcus aureus subsp. aureus WW2703/97]
gi|282331421|gb|EFB60935.1| acetoin utilization protein acuC [Staphylococcus aureus subsp.
aureus Btn1260]
gi|282595922|gb|EFC00886.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus C160]
gi|283790632|gb|EFC29449.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus A017934/97]
gi|290920009|gb|EFD97077.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus M1015]
gi|291095273|gb|EFE25538.1| acetoin utilization protein acuC [Staphylococcus aureus subsp.
aureus 58-424]
gi|291466514|gb|EFF09035.1| acetoin utilization protein acuC [Staphylococcus aureus subsp.
aureus M809]
gi|295127705|gb|EFG57342.1| acetoin utilization protein acuC [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297575618|gb|EFH94334.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus MN8]
gi|312437809|gb|ADQ76880.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus TCH60]
gi|315195641|gb|EFU26028.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus CGS00]
gi|341851634|gb|EGS92548.1| histone deacetylase family [Staphylococcus aureus subsp. aureus
21195]
gi|371975713|gb|EHO93005.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus 21264]
gi|374397105|gb|EHQ68323.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus 21345]
gi|374401872|gb|EHQ72924.1| histone deacetylase family protein [Staphylococcus aureus subsp.
aureus 21342]
gi|377701912|gb|EHT26238.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIG1214]
gi|377703517|gb|EHT27831.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIG1500]
gi|377703793|gb|EHT28105.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIG1242]
gi|377709408|gb|EHT33661.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIG1605]
gi|377729947|gb|EHT54024.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIG1176]
gi|377734148|gb|EHT58187.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIG1233]
gi|377749703|gb|EHT73647.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIG1267]
gi|377751400|gb|EHT75330.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIG149]
gi|377759828|gb|EHT83708.1| acetoin utilization protein AcuC [Staphylococcus aureus subsp.
aureus CIGC341D]
Length = 389
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 116/255 (45%), Gaps = 24/255 (9%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIE 113
HPF+ + + L + L IV+P A+ ++L+++H Y+++++ + + II E
Sbjct: 25 HPFNQMRLKLTTELLLNANLLSPEQIVQPRIATDDELMLIHKYDYVEAIKHASH-GIISE 83
Query: 114 VPPVALFPNCLVQRKVLYPFRKQ---VGGTILAAKLAKERGWAIN---VGGGFHHCSADE 167
+ N + + R VGG + A L G A+N +GGG HH
Sbjct: 84 DEAMKYGLNDEENGQFKHMHRHSATIVGGALTLADLIMS-GKALNGCHLGGGLHHAQPGR 142
Query: 168 GGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG-- 225
GFC Y DI++ Y + N RV+IID DAH G+G + F +D+ V + G
Sbjct: 143 ASGFCIYNDIAITAQYLAKEYN-QRVLIIDTDAHHGDGTQWSFYADNHVTTYSIHETGKF 201
Query: 226 IYPRDYEARRFIDQKVEVVSGTTTN----------EYLKKLDEALEVAGHTFDPELVIYN 275
++P + + ++ ++ G T N +L+ +E +F P++++
Sbjct: 202 LFPG---SGHYTERGEDIGYGHTVNVPLEPYTEDSSFLECFKLTVEPVVKSFKPDIILSV 258
Query: 276 AGTDILEGDPLGMLK 290
G DI DPL L
Sbjct: 259 NGVDIHYRDPLTHLN 273
>gi|332306071|ref|YP_004433922.1| histone deacetylase superfamily protein [Glaciecola sp.
4H-3-7+YE-5]
gi|332173400|gb|AEE22654.1| histone deacetylase superfamily [Glaciecola sp. 4H-3-7+YE-5]
Length = 301
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 111/247 (44%), Gaps = 20/247 (8%)
Query: 54 HPFDSSKWGRIC-QFLSS--EGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSS-PNVS 109
HP S+ I Q ++S + +DK + +A+KE L + H ++Y+ S+ +S P
Sbjct: 16 HPESPSRLHAINDQLIASRLDAIIDKQ---QATQATKEQLYLAHDKAYVDSVFASVPEQG 72
Query: 110 IIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKL-----AKERGWAINVGGGFHHCS 164
I+ P L P L LY G ++A L A++ A+ G HH
Sbjct: 73 IVELAPDTQLGPRSL--EAALY----AAGANVMAVDLVMQGKAQQAFCAVRPPG--HHAE 124
Query: 165 ADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNP 224
+ GFC + +I++ HYA Q + R+ IID D H GNG E F D RV F
Sbjct: 125 YAKAMGFCFFNNIAVAAHYAMAQYGLERIAIIDFDVHHGNGTENIFFDDERVLFCSSFES 184
Query: 225 GIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGD 284
+P + + + +GT +E+++ + + F P+L++ +AG D D
Sbjct: 185 PFFPYNMGPGNEHILNLPMPAGTYGDEFMQAIGDKWLPKIDAFAPQLILISAGFDSHYED 244
Query: 285 PLGMLKV 291
+G +
Sbjct: 245 DMGHFNL 251
>gi|357012364|ref|ZP_09077363.1| acetoin utilization protein AcuC [Paenibacillus elgii B69]
Length = 392
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 110/260 (42%), Gaps = 33/260 (12%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQS----SPNVS 109
HPF+ + L L + ++ P+ A + L VHS+ Y+ ++++ P
Sbjct: 22 HPFNQQRLVLTVDLLRKAKALSGDSLIRPMPADETQLCSVHSQEYVNAVKALSADQPTEE 81
Query: 110 II-------IEVPPVALFPNCLVQRKVLYPFRKQVGGTILA--AKLAKERGWAINVGGGF 160
+ ++ FP L VGG+I A A L E G A+++GGG
Sbjct: 82 WLHQAGKYGLDTEDTPFFPGMHQATSFL------VGGSIRAVDAVLGGEAGHALHLGGGL 135
Query: 161 HHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILD 220
HH +G GFC Y D ++ I +A + + RV+ ID D H G+G + F +D
Sbjct: 136 HHAMPHKGAGFCVYNDAAVAIAHAKSKYGV-RVLYIDTDVHHGDGVQWSFYTDPDTCTFS 194
Query: 221 MFNPGIYPRDYEARRFIDQKVEVVS-GTTTN----------EYLKKLDEALEVAGHTFDP 269
+ G Y + ++++ + GTT N +L+ +E L F P
Sbjct: 195 IHETGKYL--FPGTGAVNERGDGTGFGTTINVPMEPFTEDESWLECFEEVLVKTAAQFKP 252
Query: 270 ELVIYNAGTDILEGDPLGML 289
+L++ G D DPL +
Sbjct: 253 DLIVSQHGCDAHAYDPLAHI 272
>gi|291407695|ref|XP_002720141.1| PREDICTED: histone deacetylase 8-like [Oryctolagus cuniculus]
Length = 410
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 113/262 (43%), Gaps = 19/262 (7%)
Query: 38 IYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSES 97
IYSP+Y + K+ + + + + + +V+P AS E++ H+++
Sbjct: 19 IYSPEYVTICDSLAKV----PKRASMVHSLIEAYALPKQMRVVKPKVASMEEMASFHTDA 74
Query: 98 YLKSLQ--SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKER--GWA 153
YL+ LQ S + L +C + G TI AA+ + A
Sbjct: 75 YLQHLQEVSEEGDDDHPDSVEYGLGYDCPATEGIFDYAAAVAGATITAAQCLIDGMCKVA 134
Query: 154 INVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSD 213
IN GG+HH DE GFC D L I ++ R++ +DLD H G+G E FS
Sbjct: 135 INWSGGWHHAKKDEASGFCYLNDAVLGI--LRLRRKFDRILYVDLDLHHGDGVEDAFSFT 192
Query: 214 SRVYILDM--FNPGIYPRDYEA-------RRFIDQKVEVVSGTTTNEYLKKLDEALEVAG 264
S+V + + F+PG +P + R+ V + G +Y + L+ A
Sbjct: 193 SKVMTVSLHKFSPGFFPGTGDMCDVGLGRGRYYSVNVPIQDGIQDEKYYHICESVLKEAY 252
Query: 265 HTFDPELVIYNAGTDILEGDPL 286
F+P+ V+ G D + GDP+
Sbjct: 253 QAFNPKAVVLQLGADTIAGDPM 274
>gi|291227687|ref|XP_002733814.1| PREDICTED: histone deacetylase 8-like [Saccoglossus kowalevskii]
Length = 520
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 128/296 (43%), Gaps = 25/296 (8%)
Query: 7 PSVTTDAETLKRNRIL-SSKLYFDIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRIC 65
P +T D+ K N I+ SS F + + +YS +Y + + P ++ +
Sbjct: 134 PRLTIDS---KENSIMHSSPHQFKLGSLSVCYLYSEEY----IRLCNKLPKIPNRASMVH 186
Query: 66 QFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSIIIEVPPVA----LFP 121
L + G LD ++ +A++ +L H+ Y++ LQ + +V ++ +
Sbjct: 187 SLLEAYGLLDPITVLRCRKATQHELTSFHTTDYIEYLQKINDEDDSEKVDEMSQEYGMGY 246
Query: 122 NCLVQRKVLYPFRKQVGGTILAAK--LAKERGWAINVGGGFHHCSADEGGGFCAYADISL 179
+C V G TI AA+ L AIN GG+HH DE GFC D+ L
Sbjct: 247 DCPSMPGVYDLVGCVAGATIQAAQCLLDGTADVAINWFGGWHHAKRDEAAGFCYVNDVVL 306
Query: 180 CIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDM--FNPGIYPRDYEAR--- 234
I + N R+M ID+D H G+G E FS S+V + + + PG +P
Sbjct: 307 GILKLKEKFN--RIMYIDIDLHHGDGVENAFSFTSKVMTVSLHKYAPGFFPSTGNQNDIG 364
Query: 235 ----RFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPL 286
+F V + G +Y + L A ++PE+++ G D + GDP+
Sbjct: 365 IGRGKFYTVNVPLYDGIQDVQYNSVFNRVLNEAKRCYNPEVIVLQCGVDTISGDPM 420
>gi|359784243|ref|ZP_09287416.1| histone deacetylase superfamily protein [Halomonas sp. GFAJ-1]
gi|359298436|gb|EHK62651.1| histone deacetylase superfamily protein [Halomonas sp. GFAJ-1]
Length = 313
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 112/251 (44%), Gaps = 11/251 (4%)
Query: 41 PDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLK 100
PD + +G E HP + I LS G L + + L AS+E L VH +L+
Sbjct: 9 PDCSLHHMGPE--HPESPLRLEAIRARLSLAGLLQQTMQADALGASEEALARVHPLRHLR 66
Query: 101 SLQSS-PNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGG 159
+L+ P+ II + P+ L +V + + + A A+ G
Sbjct: 67 ALEKCVPSEGIITLDSDTMMNPDSLHAARVAAGAVVRGVDQVFK-RQADNVFCAVRPPG- 124
Query: 160 FHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYIL 219
HH A + GFC Y ++++ +A + R+ I+D D HQ NG F +D V I
Sbjct: 125 -HHAEASDAMGFCFYNNVAVGAAHARAKYGAKRIAILDFDVHQCNGTIDIFKNDPEVLIC 183
Query: 220 DMFNPGIYPRDY---EARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNA 276
F YP Y E + I+ +EV GT + E+ + ++ A H F P+LV+ +A
Sbjct: 184 TSFQYPFYPWRYLRSEWQNVINTPLEV--GTDSVEFRRVVERRWLPALHAFKPDLVMLSA 241
Query: 277 GTDILEGDPLG 287
G D DP+G
Sbjct: 242 GFDAHRDDPMG 252
>gi|410643523|ref|ZP_11354019.1| histone deacetylase family protein [Glaciecola chathamensis S18K6]
gi|410136933|dbj|GAC12206.1| histone deacetylase family protein [Glaciecola chathamensis S18K6]
Length = 305
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 111/247 (44%), Gaps = 20/247 (8%)
Query: 54 HPFDSSKWGRIC-QFLSS--EGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSS-PNVS 109
HP S+ I Q ++S + +DK + +A+KE L + H ++Y+ S+ +S P
Sbjct: 20 HPESPSRLHAINDQLIASRLDAIIDKQ---QATQATKEQLYLAHDKAYVDSVFASVPEQG 76
Query: 110 IIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKL-----AKERGWAINVGGGFHHCS 164
I+ P L P L LY G ++A L A++ A+ G HH
Sbjct: 77 IVELAPDTQLGPRSL--EAALY----AAGANVMAVDLVMQGKAQQAFCAVRPPG--HHAE 128
Query: 165 ADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNP 224
+ GFC + +I++ HYA Q + R+ IID D H GNG E F D RV F
Sbjct: 129 YAKAMGFCFFNNIAVAAHYAMAQYGLERIAIIDFDVHHGNGTENIFFDDERVLFCSSFES 188
Query: 225 GIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGD 284
+P + + + +GT +E+++ + + F P+L++ +AG D D
Sbjct: 189 PFFPYNMGPGNEHILNLPMPAGTYGDEFMQAIGDKWLPKIDAFAPQLILISAGFDSHYED 248
Query: 285 PLGMLKV 291
+G +
Sbjct: 249 DMGHFNL 255
>gi|404417686|ref|ZP_10999474.1| acetoin utilization protein [Staphylococcus arlettae CVD059]
gi|403489888|gb|EJY95445.1| acetoin utilization protein [Staphylococcus arlettae CVD059]
Length = 384
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 113/249 (45%), Gaps = 20/249 (8%)
Query: 54 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQ-SSPNVSIII 112
HPF+ + + L L + +++P AS E++ ++HS Y++++ +S + +
Sbjct: 24 HPFNQMRLKLTTELLVDLNALHNHHLIQPRLASDEEIALIHSYDYIQAMHHASHGILSDV 83
Query: 113 EVPPVALFPNCLVQRKVLYPFRKQVGGTILA---AKLAKERGWAINVGGGFHHCSADEGG 169
E L +Q K ++ ++ G L A + + ++GGG HH
Sbjct: 84 EARKYGLDGEDTMQFKHMHQHSARIVGGALNLADAIMTNKVTNGCHLGGGLHHALPGRAN 143
Query: 170 GFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG--IY 227
GFC Y D+++ I + + N SRV+ ID DAH G+G + F ++ V + G ++
Sbjct: 144 GFCVYNDVAITIAHLIQKYN-SRVLCIDTDAHHGDGTQWSFYTNDHVLNYSIHETGKFLF 202
Query: 228 PRDYEARRFIDQKVEVVSGTTTN----------EYLKKLDEALEVAGHTFDPELVIYNAG 277
P + + ++ E G T N YL+ + +E TF P+++I G
Sbjct: 203 PG---SGHYTERGSEQGFGYTVNLPLEPFTENDSYLESFKQTIEPVIKTFKPDIIISVHG 259
Query: 278 TDILEGDPL 286
DI DPL
Sbjct: 260 VDIHYLDPL 268
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.139 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,757,105,398
Number of Sequences: 23463169
Number of extensions: 202487680
Number of successful extensions: 430331
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3119
Number of HSP's successfully gapped in prelim test: 2750
Number of HSP's that attempted gapping in prelim test: 416719
Number of HSP's gapped (non-prelim): 7126
length of query: 295
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 154
effective length of database: 9,050,888,538
effective search space: 1393836834852
effective search space used: 1393836834852
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 76 (33.9 bits)