BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022559
(295 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q2KI24|MTHSD_BOVIN Methenyltetrahydrofolate synthase domain-containing protein OS=Bos
taurus GN=MTHFSD PE=2 SV=1
Length = 380
Score = 176 bits (446), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 91/171 (53%), Positives = 114/171 (66%), Gaps = 2/171 (1%)
Query: 96 KWIIRKRIWDLMEVQNIAQNPRPVHHRIPNFVGASVAAKNLTGLEEFRVAGCVKVNPDSP 155
K IR++IWD ME QN+A PRPVHHRIPNF GAS AA++ L+ F++A +KVNPD+P
Sbjct: 9 KQDIREQIWDYMESQNLADFPRPVHHRIPNFKGASRAAEHFPRLQAFKMARTIKVNPDAP 68
Query: 156 QKQVRLLTLSGGKKLLTPQPRLRTGFFSVLDSSMLSPSTINEAC-TSVGVAKYGKQIGLD 214
QK R L K LL P PRLRTG F+ + + I C TS GV Y +GLD
Sbjct: 69 QKNARFFVLESKKTLLVPTPRLRTGLFNKITPPPGATKDILRKCATSQGVRNYSTPVGLD 128
Query: 215 EIIKVDLIVIGSVAVNPKTGARLGKGEGFAELEYGMLRYMGAIDDSTPVVT 265
+ VDL+V+GSVAV+ K G R+GKGEG+A+LEY M+ MGA+ TPVVT
Sbjct: 129 SKVLVDLVVVGSVAVSEK-GWRIGKGEGYADLEYAMMVSMGAVSQGTPVVT 178
>sp|Q2M296|MTHSD_HUMAN Methenyltetrahydrofolate synthase domain-containing protein OS=Homo
sapiens GN=MTHFSD PE=1 SV=2
Length = 383
Score = 163 bits (413), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 89/171 (52%), Positives = 111/171 (64%), Gaps = 2/171 (1%)
Query: 96 KWIIRKRIWDLMEVQNIAQNPRPVHHRIPNFVGASVAAKNLTGLEEFRVAGCVKVNPDSP 155
K IR++IW ME QN+A PRPVHHRIPNF G+ +A +N+ L+ F VKV+PD P
Sbjct: 10 KQDIREQIWGYMESQNLADFPRPVHHRIPNFKGSYLACQNIKDLDVFARTQEVKVDPDKP 69
Query: 156 QKQVRLLTLSGGKKLLTPQPRLRTGFFSVLDSSMLSPSTINEAC-TSVGVAKYGKQIGLD 214
+ VRLL L K LL P PRLRTG F+ + + I C TS GV Y IGLD
Sbjct: 70 LEGVRLLVLQSKKTLLVPTPRLRTGLFNKITPPPGATKDILRKCATSQGVRNYSVPIGLD 129
Query: 215 EIIKVDLIVIGSVAVNPKTGARLGKGEGFAELEYGMLRYMGAIDDSTPVVT 265
+ VDL+V+GSVAV+ K G R+GKGEG+A+LEY M+ MGA+ TPVVT
Sbjct: 130 SRVLVDLVVVGSVAVSEK-GWRIGKGEGYADLEYAMMVSMGAVSKETPVVT 179
>sp|Q0P464|MTHSD_DANRE Methenyltetrahydrofolate synthase domain-containing protein
OS=Danio rerio GN=mthfsd PE=2 SV=1
Length = 382
Score = 158 bits (399), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 79/171 (46%), Positives = 113/171 (66%), Gaps = 2/171 (1%)
Query: 96 KWIIRKRIWDLMEVQNIAQNPRPVHHRIPNFVGASVAAKNLTGLEEFRVAGCVKVNPDSP 155
KW +R ++W+ +EV+N+A PRPVH+RIPNF GA A + LE F + VKV+PD P
Sbjct: 13 KWDVRHKVWNYIEVKNLANFPRPVHNRIPNFKGALEACNKVAQLEIFIESAVVKVDPDKP 72
Query: 156 QKQVRLLTLSGGKKLLTPQPRLRTGFFS-VLDSSMLSPSTINEACTSVGVAKYGKQIGLD 214
+ VRL L K LL P PRLR G F+ + + T+ TS G+ ++ +GLD
Sbjct: 73 MEGVRLAALKARKSLLVPTPRLRFGLFNRITPPKGATKETLRVCSTSQGIKEFSVPVGLD 132
Query: 215 EIIKVDLIVIGSVAVNPKTGARLGKGEGFAELEYGMLRYMGAIDDSTPVVT 265
+ ++VDL+V+GSVAV+ K G R+GKGEGFA++EY M+ MG++ +ST V+T
Sbjct: 133 DKVQVDLVVVGSVAVSEK-GYRIGKGEGFADMEYAMMACMGSVTESTWVIT 182
>sp|Q3URQ7|MTHSD_MOUSE Methenyltetrahydrofolate synthase domain-containing protein OS=Mus
musculus GN=Mthfsd PE=2 SV=1
Length = 372
Score = 150 bits (378), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/184 (51%), Positives = 117/184 (63%), Gaps = 8/184 (4%)
Query: 83 ETESGAEDDPKSWKWIIRKRIWDLMEVQNIAQNPRPVHHRIPNFVGASVAAKNLTGLEEF 142
ET+ G K IR+RIWD ME +IA PRPVHHRIPNF GA+ AA +L L+ F
Sbjct: 2 ETQEGVS------KQSIRERIWDYMESHDIADFPRPVHHRIPNFKGAAQAAGHLPHLQAF 55
Query: 143 RVAGCVKVNPDSPQKQVRLLTLSGGKKLLTPQPRLRTGFFSVLDSSMLSPSTINEAC-TS 201
VA +KVNPD+PQ+ R L L K LL P PRLRTG F+ + + I C TS
Sbjct: 56 HVARTIKVNPDAPQRNARFLVLESKKTLLVPTPRLRTGLFNKITPPPGATKDILRKCATS 115
Query: 202 VGVAKYGKQIGLDEIIKVDLIVIGSVAVNPKTGARLGKGEGFAELEYGMLRYMGAIDDST 261
GV + +GLD + VDL+V+GSVAV+ K G R+GKGEG+A+LEY M+ MGA+ T
Sbjct: 116 QGVRNFSVPVGLDSSVLVDLVVVGSVAVSEK-GWRIGKGEGYADLEYAMMVSMGAVHKGT 174
Query: 262 PVVT 265
PVVT
Sbjct: 175 PVVT 178
>sp|Q52L34|MTHSD_XENLA Methenyltetrahydrofolate synthase domain-containing protein
OS=Xenopus laevis GN=mthfsd PE=2 SV=1
Length = 415
Score = 143 bits (361), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/173 (48%), Positives = 109/173 (63%), Gaps = 2/173 (1%)
Query: 85 ESGAEDDPKSWKWIIRKRIWDLMEVQNIAQNPRPVHHRIPNFVGASVAAKNLTGLEEFRV 144
E G DP KW IR+++WD +E N+A PRPVHHRIPNF + A +N+ LE FR
Sbjct: 2 EPGIRVDPGCSKWDIRQKVWDYIENNNLADFPRPVHHRIPNFKESHQACQNIIDLEVFRR 61
Query: 145 AGCVKVNPDSPQKQVRLLTLSGGKKLLTPQPRLRTGFFSVLDSSMLSPSTINEAC-TSVG 203
VKV+PD P + VRL L K LL P PRLRTG F+ + + + C TS G
Sbjct: 62 TWEVKVDPDKPLEGVRLAALQARKTLLVPTPRLRTGLFNKITPPPGANKEVLRICSTSQG 121
Query: 204 VAKYGKQIGLDEIIKVDLIVIGSVAVNPKTGARLGKGEGFAELEYGMLRYMGA 256
V Y +GLD ++VDL+V+GSVAV+ + G R+GKGEGFA++EY M+ MGA
Sbjct: 122 VKDYSVPMGLDAKVQVDLVVVGSVAVSVQ-GWRIGKGEGFADMEYAMMVSMGA 173
>sp|P13603|ADH1_TRIRP Alcohol dehydrogenase 1 OS=Trifolium repens GN=ADH1 PE=2 SV=1
Length = 380
Score = 33.1 bits (74), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 46/115 (40%), Gaps = 33/115 (28%)
Query: 117 RPVHHRIPNFVGASVAAKNLTGLEEFRV--AGCV-KVNPDSPQKQVRLLT------LSGG 167
+PVHH FVG S E+ V AGCV K+NPD+P +V +L+ L
Sbjct: 139 QPVHH----FVGTST-------FSEYTVVHAGCVAKINPDAPLDKVCILSCGICTGLGAT 187
Query: 168 KKLLTPQPRLRTGFFSVLDSSMLSPSTINEACTSVGVAKYGKQIGLDEIIKVDLI 222
+ P+P F + + A+ + G II VDL+
Sbjct: 188 VNVAKPKPGSSVAIFGL-------------GAVGLAAAEGARMSGASRIIGVDLV 229
>sp|Q3YRN4|SYFB_EHRCJ Phenylalanine--tRNA ligase beta subunit OS=Ehrlichia canis (strain
Jake) GN=pheT PE=3 SV=1
Length = 785
Score = 32.7 bits (73), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
Query: 139 LEEFRVAGCVKVNPDSPQKQVRLLTLSGGKKLL---TPQPRLRTGFFSVL---DSSMLSP 192
L+ F +A ++VNP ++++ +S GK++L ++ G SVL S M +
Sbjct: 41 LKTFVIAEVLEVNPHHSANKLKICKVSDGKQILQVVCGASNVKVGMKSVLACVGSIMPTD 100
Query: 193 STINEACTSVGVAKYGKQIGLDEIIKVD 220
+I E GV YG DE+ VD
Sbjct: 101 QSIIEVVKLRGVESYGMLCSNDELGIVD 128
>sp|Q6ZI17|OML2_ORYSJ Protein MEI2-like 2 OS=Oryza sativa subsp. japonica GN=ML2 PE=2
SV=1
Length = 848
Score = 32.0 bits (71), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 34/87 (39%), Gaps = 1/87 (1%)
Query: 91 DPKSWKWIIRKRIWDLMEVQNIAQNPRPVHHRIPNFVGASVAAKNLTGLEEFRVAGC-VK 149
DP +R+ EV+ I + P HH+ F A L L + +AG +K
Sbjct: 290 DPSVSNEEVRQIFGTYGEVKEIRETPNKKHHKFIEFYDVRAAEAALRSLNKSEIAGKRIK 349
Query: 150 VNPDSPQKQVRLLTLSGGKKLLTPQPR 176
+ P P R L G + +PR
Sbjct: 350 LEPSRPGGTRRNLMQQLGHDIDQDEPR 376
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 108,407,871
Number of Sequences: 539616
Number of extensions: 4532567
Number of successful extensions: 11568
Number of sequences better than 100.0: 23
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 11543
Number of HSP's gapped (non-prelim): 32
length of query: 295
length of database: 191,569,459
effective HSP length: 117
effective length of query: 178
effective length of database: 128,434,387
effective search space: 22861320886
effective search space used: 22861320886
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)