Query 022560
Match_columns 295
No_of_seqs 435 out of 2690
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 07:28:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022560.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022560hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2goy_A Adenosine phosphosulfat 100.0 4.3E-40 1.5E-44 295.1 10.3 153 2-157 113-265 (275)
2 2oq2_A Phosphoadenosine phosph 100.0 1.9E-37 6.6E-42 275.9 9.5 133 8-152 115-249 (261)
3 2o8v_A Phosphoadenosine phosph 100.0 1.3E-34 4.6E-39 256.3 10.9 131 8-154 110-245 (252)
4 3fwk_A FMN adenylyltransferase 99.9 1E-28 3.6E-33 221.1 7.4 108 8-129 125-238 (308)
5 1zun_A Sulfate adenylyltransfe 99.9 9.4E-26 3.2E-30 206.1 6.9 116 22-138 123-307 (325)
6 2wsi_A FAD synthetase; transfe 99.9 9.1E-25 3.1E-29 198.1 7.8 127 7-142 119-251 (306)
7 3zzx_A Thioredoxin; oxidoreduc 99.9 2.1E-22 7.3E-27 154.4 13.0 103 185-295 2-105 (105)
8 3h79_A Thioredoxin-like protei 99.9 1.1E-21 3.9E-26 154.6 15.5 109 181-294 13-126 (127)
9 2av4_A Thioredoxin-like protei 99.8 6.3E-21 2.1E-25 154.9 10.8 106 184-294 22-137 (160)
10 2qsi_A Putative hydrogenase ex 99.8 6.1E-21 2.1E-25 152.3 10.4 105 183-294 15-121 (137)
11 3gnj_A Thioredoxin domain prot 99.8 3E-20 1E-24 142.0 13.6 105 183-294 4-108 (111)
12 3hxs_A Thioredoxin, TRXP; elec 99.8 2.3E-20 8E-25 149.3 13.2 110 180-294 19-137 (141)
13 2dml_A Protein disulfide-isome 99.8 5.1E-20 1.8E-24 145.1 14.5 108 181-294 15-122 (130)
14 2dj1_A Protein disulfide-isome 99.8 4.3E-20 1.5E-24 147.4 13.6 105 182-294 16-122 (140)
15 3tco_A Thioredoxin (TRXA-1); d 99.8 5.4E-20 1.8E-24 139.8 13.1 105 182-294 3-107 (109)
16 2qgv_A Hydrogenase-1 operon pr 99.8 4.4E-21 1.5E-25 153.7 7.2 103 184-294 18-123 (140)
17 1sur_A PAPS reductase; assimil 99.8 9E-21 3.1E-25 163.5 8.9 86 26-122 128-215 (215)
18 2trx_A Thioredoxin; electron t 99.8 9.5E-20 3.3E-24 138.7 13.1 105 183-294 2-106 (108)
19 3die_A Thioredoxin, TRX; elect 99.8 9.7E-20 3.3E-24 137.8 12.9 103 183-294 3-105 (106)
20 3ga4_A Dolichyl-diphosphooligo 99.8 1.1E-19 3.7E-24 151.7 13.9 109 181-293 16-150 (178)
21 1x5d_A Protein disulfide-isome 99.8 1.1E-19 3.9E-24 143.4 13.3 106 182-294 6-115 (133)
22 2i4a_A Thioredoxin; acidophIle 99.8 1.8E-19 6E-24 136.6 13.8 106 183-295 2-107 (107)
23 1x5e_A Thioredoxin domain cont 99.8 1.7E-19 5.7E-24 141.6 13.7 103 182-294 6-108 (126)
24 1nsw_A Thioredoxin, TRX; therm 99.8 1.1E-19 3.7E-24 137.7 12.1 102 185-294 2-103 (105)
25 3p2a_A Thioredoxin 2, putative 99.8 2.1E-19 7.3E-24 145.2 14.4 105 182-294 37-141 (148)
26 3uvt_A Thioredoxin domain-cont 99.8 1.8E-19 6.2E-24 137.5 13.0 105 182-294 4-110 (111)
27 1r26_A Thioredoxin; redox-acti 99.8 1.7E-19 5.8E-24 142.3 13.0 112 173-294 9-121 (125)
28 3qfa_C Thioredoxin; protein-pr 99.8 9.6E-20 3.3E-24 141.4 11.2 103 184-294 13-115 (116)
29 2yzu_A Thioredoxin; redox prot 99.8 2.2E-19 7.4E-24 136.3 12.9 103 184-294 2-104 (109)
30 3hz4_A Thioredoxin; NYSGXRC, P 99.8 1.2E-19 4E-24 145.6 11.9 106 182-294 5-110 (140)
31 2ppt_A Thioredoxin-2; thiredox 99.8 1.9E-19 6.4E-24 147.4 13.2 105 182-294 46-150 (155)
32 1t00_A Thioredoxin, TRX; redox 99.8 2.8E-19 9.7E-24 137.0 13.4 106 182-294 4-109 (112)
33 2voc_A Thioredoxin; electron t 99.8 1.2E-19 4.2E-24 139.7 11.3 102 184-294 2-103 (112)
34 3f3q_A Thioredoxin-1; His TAG, 99.8 2.8E-19 9.7E-24 137.1 13.0 100 185-294 9-108 (109)
35 2l5l_A Thioredoxin; structural 99.8 3E-19 1E-23 142.4 13.5 107 182-294 8-124 (136)
36 1dby_A Chloroplast thioredoxin 99.8 3.3E-19 1.1E-23 135.4 13.0 104 184-294 2-105 (107)
37 1w4v_A Thioredoxin, mitochondr 99.8 2.6E-19 8.8E-24 139.5 12.6 106 182-294 12-117 (119)
38 2pu9_C TRX-F, thioredoxin F-ty 99.8 4.2E-19 1.5E-23 136.1 13.3 105 182-294 4-109 (111)
39 1thx_A Thioredoxin, thioredoxi 99.8 5.3E-19 1.8E-23 135.7 13.7 106 182-294 6-111 (115)
40 3aps_A DNAJ homolog subfamily 99.8 1.8E-19 6.3E-24 140.3 11.2 107 182-294 2-111 (122)
41 3d6i_A Monothiol glutaredoxin- 99.8 3.8E-19 1.3E-23 136.4 12.7 105 185-294 2-107 (112)
42 2o8v_B Thioredoxin 1; disulfid 99.8 1.8E-19 6.2E-24 142.5 11.2 107 181-294 20-126 (128)
43 2e0q_A Thioredoxin; electron t 99.8 4.5E-19 1.5E-23 133.2 12.4 101 185-294 1-101 (104)
44 4euy_A Uncharacterized protein 99.8 6E-20 2.1E-24 139.7 7.5 97 189-294 7-103 (105)
45 1fb6_A Thioredoxin M; electron 99.8 6E-19 2.1E-23 133.2 13.0 103 185-294 2-104 (105)
46 3idv_A Protein disulfide-isome 99.8 4.6E-19 1.6E-23 153.9 13.4 107 180-294 12-120 (241)
47 1ep7_A Thioredoxin CH1, H-type 99.8 5.1E-19 1.8E-23 135.4 12.2 106 183-294 2-109 (112)
48 1gh2_A Thioredoxin-like protei 99.8 9.3E-19 3.2E-23 133.3 13.4 102 185-294 3-105 (107)
49 1syr_A Thioredoxin; SGPP, stru 99.8 8.3E-19 2.8E-23 134.9 12.1 102 183-294 9-110 (112)
50 3evi_A Phosducin-like protein 99.8 4.5E-19 1.5E-23 138.7 10.6 103 183-293 3-111 (118)
51 2i1u_A Thioredoxin, TRX, MPT46 99.8 8.4E-19 2.9E-23 136.1 12.1 106 182-294 11-116 (121)
52 3qou_A Protein YBBN; thioredox 99.8 5.5E-19 1.9E-23 157.9 12.6 107 182-294 6-112 (287)
53 2dj3_A Protein disulfide-isome 99.8 1.2E-19 4.1E-24 143.5 7.0 109 182-294 6-116 (133)
54 1faa_A Thioredoxin F; electron 99.8 1.6E-18 5.4E-23 135.5 13.3 107 182-295 17-123 (124)
55 1mek_A Protein disulfide isome 99.8 2.2E-19 7.5E-24 138.6 8.2 107 182-294 6-115 (120)
56 3apq_A DNAJ homolog subfamily 99.8 2.3E-18 7.8E-23 147.5 14.3 106 181-294 95-200 (210)
57 3m9j_A Thioredoxin; oxidoreduc 99.8 2.4E-18 8.3E-23 130.0 12.8 101 186-294 3-104 (105)
58 2djj_A PDI, protein disulfide- 99.8 6.5E-19 2.2E-23 136.8 9.9 105 182-294 6-115 (121)
59 3ed3_A Protein disulfide-isome 99.8 2.8E-18 9.4E-23 155.1 14.9 108 181-294 15-140 (298)
60 1xfl_A Thioredoxin H1; AT3G510 99.8 2.7E-18 9.2E-23 134.9 13.0 106 182-294 15-122 (124)
61 2xc2_A Thioredoxinn; oxidoredu 99.8 2.4E-18 8.3E-23 133.2 12.5 101 185-294 15-116 (117)
62 1xwb_A Thioredoxin; dimerizati 99.8 2.8E-18 9.7E-23 129.7 12.5 103 185-294 2-105 (106)
63 3us3_A Calsequestrin-1; calciu 99.8 2.7E-18 9.2E-23 159.4 14.5 111 176-294 6-122 (367)
64 2vlu_A Thioredoxin, thioredoxi 99.8 2.9E-18 1E-22 133.5 12.5 105 183-294 13-118 (122)
65 3ul3_B Thioredoxin, thioredoxi 99.8 9.6E-19 3.3E-23 137.9 9.7 88 201-293 40-127 (128)
66 3gix_A Thioredoxin-like protei 99.8 1.7E-18 5.7E-23 140.8 11.3 102 188-294 9-119 (149)
67 2l6c_A Thioredoxin; oxidoreduc 99.8 1.7E-18 5.9E-23 132.9 10.7 101 184-294 4-104 (110)
68 1oaz_A Thioredoxin 1; immune s 99.8 3.4E-19 1.2E-23 140.0 6.5 106 182-294 2-121 (123)
69 2b5e_A Protein disulfide-isome 99.8 5.1E-18 1.8E-22 163.5 16.0 108 181-294 12-120 (504)
70 2vim_A Thioredoxin, TRX; thior 99.8 5.5E-18 1.9E-22 127.6 12.9 102 185-294 1-103 (104)
71 1v98_A Thioredoxin; oxidoreduc 99.8 3.2E-18 1.1E-22 136.9 12.1 104 183-294 33-136 (140)
72 2oe3_A Thioredoxin-3; electron 99.8 2.1E-18 7E-23 133.6 10.4 102 183-294 12-114 (114)
73 3dxb_A Thioredoxin N-terminall 99.8 2.8E-18 9.7E-23 148.3 12.2 107 181-294 10-116 (222)
74 2r2j_A Thioredoxin domain-cont 99.8 2.1E-18 7.3E-23 160.8 12.3 106 183-294 5-115 (382)
75 2dj0_A Thioredoxin-related tra 99.8 2E-19 6.8E-24 143.6 4.5 104 183-291 7-116 (137)
76 2wz9_A Glutaredoxin-3; protein 99.8 4.8E-18 1.6E-22 138.3 12.5 104 183-294 12-116 (153)
77 2dbc_A PDCL2, unnamed protein 99.8 4.5E-18 1.5E-22 135.8 11.2 104 183-294 10-119 (135)
78 1zma_A Bacterocin transport ac 99.8 1.9E-18 6.6E-23 134.0 8.6 102 183-293 12-118 (118)
79 3q6o_A Sulfhydryl oxidase 1; p 99.8 1.6E-17 5.5E-22 145.3 15.4 108 181-294 10-125 (244)
80 1sji_A Calsequestrin 2, calseq 99.8 3.3E-18 1.1E-22 157.6 11.6 105 181-294 9-120 (350)
81 2j23_A Thioredoxin; immune pro 99.8 3E-18 1E-22 133.8 9.6 104 183-294 15-119 (121)
82 2l57_A Uncharacterized protein 99.8 3.9E-18 1.3E-22 133.7 10.3 105 185-294 6-115 (126)
83 1ti3_A Thioredoxin H, PTTRXH1; 99.7 6.7E-18 2.3E-22 129.2 11.0 105 183-294 4-110 (113)
84 2f51_A Thioredoxin; electron t 99.7 1.3E-17 4.4E-22 129.8 12.4 104 183-295 3-112 (118)
85 3emx_A Thioredoxin; structural 99.7 2.5E-18 8.7E-23 137.0 8.4 102 181-294 14-124 (135)
86 1qgv_A Spliceosomal protein U5 99.7 6.6E-18 2.3E-22 136.1 10.9 101 189-294 10-119 (142)
87 3d22_A TRXH4, thioredoxin H-ty 99.7 9E-18 3.1E-22 133.9 11.5 106 182-294 23-130 (139)
88 3cxg_A Putative thioredoxin; m 99.7 3.3E-18 1.1E-22 136.2 8.6 106 181-294 18-127 (133)
89 2vm1_A Thioredoxin, thioredoxi 99.7 1.8E-17 6.1E-22 127.8 12.1 105 183-294 6-112 (118)
90 3f8u_A Protein disulfide-isome 99.7 1.1E-17 3.8E-22 160.1 12.8 106 184-294 2-107 (481)
91 3idv_A Protein disulfide-isome 99.7 1.8E-17 6.1E-22 143.8 12.5 104 183-294 130-235 (241)
92 2es7_A Q8ZP25_salty, putative 99.7 3.3E-18 1.1E-22 138.1 6.8 102 184-294 18-123 (142)
93 3uem_A Protein disulfide-isome 99.7 7.2E-17 2.5E-21 148.8 14.0 107 181-294 247-355 (361)
94 2c0g_A ERP29 homolog, windbeut 99.7 1.9E-16 6.7E-21 139.0 14.6 102 182-294 15-130 (248)
95 2fwh_A Thiol:disulfide interch 99.7 1.1E-16 3.7E-21 127.2 11.1 100 189-295 18-127 (134)
96 2kuc_A Putative disulphide-iso 99.7 6.9E-17 2.3E-21 127.0 9.9 107 185-294 8-119 (130)
97 3t58_A Sulfhydryl oxidase 1; o 99.7 2E-16 6.9E-21 152.9 15.1 109 181-294 10-125 (519)
98 3fk8_A Disulphide isomerase; A 99.7 1.3E-16 4.3E-21 126.2 10.6 101 191-294 16-131 (133)
99 2yj7_A LPBCA thioredoxin; oxid 99.5 2E-18 6.8E-23 130.1 0.0 104 184-294 2-105 (106)
100 1a8l_A Protein disulfide oxido 99.7 1.6E-16 5.6E-21 136.7 12.0 104 184-294 117-224 (226)
101 2qc7_A ERP31, ERP28, endoplasm 99.7 3.8E-16 1.3E-20 136.6 14.2 102 183-294 5-117 (240)
102 1wou_A Thioredoxin -related pr 99.7 1.2E-16 4E-21 125.3 9.4 102 185-293 7-122 (123)
103 2trc_P Phosducin, MEKA, PP33; 99.7 3.2E-17 1.1E-21 141.5 6.4 105 183-294 99-211 (217)
104 2djk_A PDI, protein disulfide- 99.7 2.4E-16 8.3E-21 125.3 10.2 101 184-294 7-113 (133)
105 3f8u_A Protein disulfide-isome 99.7 5.3E-16 1.8E-20 148.4 13.9 108 181-294 350-459 (481)
106 3iv4_A Putative oxidoreductase 99.7 2.1E-16 7.3E-21 121.3 8.6 100 183-291 6-111 (112)
107 1a0r_P Phosducin, MEKA, PP33; 99.7 1.5E-16 5.2E-21 139.5 8.7 106 183-294 112-224 (245)
108 3apo_A DNAJ homolog subfamily 99.7 2.6E-16 8.9E-21 159.1 10.9 106 181-294 114-219 (780)
109 3f9u_A Putative exported cytoc 99.6 3.1E-16 1.1E-20 129.6 9.1 107 184-294 27-164 (172)
110 3qcp_A QSOX from trypanosoma b 99.6 6.7E-17 2.3E-21 153.4 5.1 96 181-279 21-124 (470)
111 1wmj_A Thioredoxin H-type; str 99.6 3.3E-17 1.1E-21 128.6 1.5 106 182-294 13-120 (130)
112 1fo5_A Thioredoxin; disulfide 99.6 5.1E-16 1.8E-20 112.6 6.8 82 204-294 3-84 (85)
113 2b5e_A Protein disulfide-isome 99.6 2.8E-15 9.6E-20 144.3 13.3 106 182-294 357-465 (504)
114 1nho_A Probable thioredoxin; b 99.6 5.6E-16 1.9E-20 112.4 6.2 81 205-294 3-83 (85)
115 2ywm_A Glutaredoxin-like prote 99.6 4.1E-15 1.4E-19 128.3 10.9 100 183-294 118-218 (229)
116 2ju5_A Thioredoxin disulfide i 99.6 9.2E-15 3.1E-19 119.0 11.9 100 191-294 34-150 (154)
117 3or5_A Thiol:disulfide interch 99.6 1.9E-14 6.3E-19 117.1 12.6 90 202-294 33-149 (165)
118 3raz_A Thioredoxin-related pro 99.6 1.5E-14 5E-19 116.6 11.8 91 202-294 23-138 (151)
119 1lu4_A Soluble secreted antige 99.6 1.5E-14 5E-19 113.7 11.2 88 202-294 23-134 (136)
120 2b5x_A YKUV protein, TRXY; thi 99.6 3.7E-14 1.3E-18 112.8 13.4 102 186-294 15-143 (148)
121 2lst_A Thioredoxin; structural 99.3 2.1E-16 7.1E-21 124.4 0.0 88 202-294 18-114 (130)
122 1z6n_A Hypothetical protein PA 99.6 4.1E-15 1.4E-19 123.1 6.9 86 186-277 39-127 (167)
123 3dml_A Putative uncharacterize 99.6 3E-15 1E-19 116.1 5.3 87 202-294 17-108 (116)
124 2h30_A Thioredoxin, peptide me 99.5 1.8E-14 6.2E-19 117.2 9.8 105 184-294 22-154 (164)
125 1zzo_A RV1677; thioredoxin fol 99.5 3.3E-14 1.1E-18 111.4 10.8 88 202-294 24-133 (136)
126 2f9s_A Thiol-disulfide oxidore 99.5 3.3E-14 1.1E-18 114.3 10.9 91 202-294 25-136 (151)
127 1sen_A Thioredoxin-like protei 99.5 3.6E-15 1.2E-19 122.9 5.1 97 191-294 37-146 (164)
128 3apo_A DNAJ homolog subfamily 99.5 5.7E-14 1.9E-18 142.0 14.8 110 182-294 542-654 (780)
129 3ph9_A Anterior gradient prote 99.5 2.5E-15 8.7E-20 122.3 3.5 99 192-293 32-139 (151)
130 3erw_A Sporulation thiol-disul 99.5 3.5E-14 1.2E-18 112.6 10.0 88 202-292 33-145 (145)
131 2hls_A Protein disulfide oxido 99.5 5.6E-14 1.9E-18 123.1 12.0 97 188-294 125-224 (243)
132 1a8l_A Protein disulfide oxido 99.5 2.9E-14 1E-18 122.5 9.7 99 190-293 9-110 (226)
133 3kp8_A Vkorc1/thioredoxin doma 99.5 5.7E-15 1.9E-19 113.0 4.2 74 203-292 12-91 (106)
134 3ira_A Conserved protein; meth 99.5 2.2E-14 7.6E-19 119.2 7.9 79 188-272 27-116 (173)
135 3lor_A Thiol-disulfide isomera 99.5 1.1E-13 3.8E-18 112.0 12.0 90 202-294 29-153 (160)
136 1ilo_A Conserved hypothetical 99.5 5.4E-14 1.9E-18 100.1 8.8 74 206-291 2-76 (77)
137 3hcz_A Possible thiol-disulfid 99.5 5.7E-14 1.9E-18 111.9 9.5 89 202-293 30-143 (148)
138 4evm_A Thioredoxin family prot 99.5 9.4E-14 3.2E-18 108.6 10.3 90 202-295 21-138 (138)
139 3hdc_A Thioredoxin family prot 99.5 1.9E-13 6.5E-18 111.0 12.2 91 202-294 40-150 (158)
140 3eyt_A Uncharacterized protein 99.5 1.2E-13 4.2E-18 111.6 10.9 90 202-294 27-150 (158)
141 2lja_A Putative thiol-disulfid 99.5 1E-13 3.5E-18 111.3 10.4 91 202-294 29-141 (152)
142 2l5o_A Putative thioredoxin; s 99.5 1.8E-13 6.1E-18 110.0 11.4 90 202-294 27-139 (153)
143 3fkf_A Thiol-disulfide oxidore 99.5 1.5E-13 5E-18 109.5 10.3 88 202-294 32-144 (148)
144 2ywm_A Glutaredoxin-like prote 99.5 1.4E-13 4.8E-18 118.6 10.5 99 191-294 9-113 (229)
145 2lrn_A Thiol:disulfide interch 99.5 3.1E-13 1.1E-17 108.9 11.0 88 202-294 28-139 (152)
146 3gl3_A Putative thiol:disulfid 99.5 4.2E-13 1.4E-17 107.7 11.7 92 202-295 27-141 (152)
147 3lwa_A Secreted thiol-disulfid 99.5 4.7E-13 1.6E-17 111.3 11.9 90 202-294 58-179 (183)
148 3eur_A Uncharacterized protein 99.5 2.6E-13 8.9E-18 108.1 9.9 86 202-293 30-142 (142)
149 3ewl_A Uncharacterized conserv 99.5 3.1E-13 1.1E-17 107.3 10.2 87 202-294 26-139 (142)
150 3ia1_A THIO-disulfide isomeras 99.4 3.3E-13 1.1E-17 108.6 10.1 85 204-294 31-142 (154)
151 2lrt_A Uncharacterized protein 99.4 9.9E-13 3.4E-17 106.3 12.7 86 202-290 34-142 (152)
152 3kcm_A Thioredoxin family prot 99.4 4.5E-13 1.5E-17 107.7 10.2 93 202-295 27-142 (154)
153 3fw2_A Thiol-disulfide oxidore 99.4 1.9E-12 6.4E-17 104.0 12.6 88 202-294 32-146 (150)
154 2b1k_A Thiol:disulfide interch 99.4 6.9E-13 2.4E-17 108.5 9.5 86 202-294 50-158 (168)
155 2fgx_A Putative thioredoxin; N 99.4 5.2E-13 1.8E-17 102.1 7.9 78 204-291 29-106 (107)
156 1kng_A Thiol:disulfide interch 99.4 7.5E-13 2.6E-17 106.5 9.2 88 202-294 41-150 (156)
157 1i5g_A Tryparedoxin II; electr 99.4 1.3E-12 4.5E-17 104.1 10.4 69 202-271 27-121 (144)
158 3ha9_A Uncharacterized thiored 99.4 1.7E-12 5.9E-17 105.8 11.1 88 202-295 36-163 (165)
159 4fo5_A Thioredoxin-like protei 99.4 1.3E-12 4.4E-17 104.1 9.4 88 202-294 31-143 (143)
160 1ttz_A Conserved hypothetical 99.4 7.8E-13 2.7E-17 97.4 7.2 73 207-294 3-75 (87)
161 2ywi_A Hypothetical conserved 99.4 2.6E-12 8.8E-17 107.7 11.0 91 202-294 44-172 (196)
162 1o73_A Tryparedoxin; electron 99.4 2.9E-12 1E-16 101.8 10.5 75 202-278 27-126 (144)
163 1o8x_A Tryparedoxin, TRYX, TXN 99.4 2.9E-12 9.9E-17 102.4 10.5 69 202-271 27-121 (146)
164 3kh7_A Thiol:disulfide interch 99.4 3.1E-12 1.1E-16 106.1 10.4 87 202-294 57-165 (176)
165 3uem_A Protein disulfide-isome 99.4 4.3E-12 1.5E-16 116.7 12.0 106 183-294 117-228 (361)
166 2hyx_A Protein DIPZ; thioredox 99.3 4.6E-12 1.6E-16 116.7 10.9 91 202-294 81-197 (352)
167 3s9f_A Tryparedoxin; thioredox 99.3 7.2E-12 2.5E-16 102.8 11.0 74 202-277 47-145 (165)
168 1jfu_A Thiol:disulfide interch 99.3 1E-11 3.4E-16 103.3 11.5 91 202-294 59-178 (186)
169 2dlx_A UBX domain-containing p 99.3 1.7E-11 5.7E-16 99.8 12.4 101 190-294 28-134 (153)
170 2cvb_A Probable thiol-disulfid 99.3 6.7E-12 2.3E-16 104.6 9.1 88 202-294 32-157 (188)
171 2ls5_A Uncharacterized protein 98.9 3.8E-13 1.3E-17 109.1 0.0 89 202-294 32-146 (159)
172 3u5r_E Uncharacterized protein 99.3 1.9E-11 6.5E-16 105.0 10.6 91 202-294 57-185 (218)
173 3drn_A Peroxiredoxin, bacterio 99.3 3E-11 1E-15 98.3 10.8 92 202-294 27-147 (161)
174 2lus_A Thioredoxion; CR-Trp16, 98.9 7.4E-13 2.5E-17 105.0 0.0 76 202-279 24-126 (143)
175 2hls_A Protein disulfide oxido 99.2 3.4E-11 1.2E-15 105.2 10.1 93 191-293 15-114 (243)
176 2rli_A SCO2 protein homolog, m 99.2 6.4E-11 2.2E-15 96.8 10.4 91 202-294 25-162 (171)
177 2ggt_A SCO1 protein homolog, m 99.2 3.6E-11 1.2E-15 97.4 8.7 91 202-294 22-159 (164)
178 2vup_A Glutathione peroxidase- 99.2 6E-11 2.1E-15 99.4 10.3 92 202-294 47-183 (190)
179 3dwv_A Glutathione peroxidase- 99.2 7E-11 2.4E-15 98.8 10.0 92 202-294 45-181 (187)
180 2p5q_A Glutathione peroxidase 99.2 3.3E-11 1.1E-15 98.3 7.8 91 202-294 31-166 (170)
181 3cmi_A Peroxiredoxin HYR1; thi 99.2 4E-11 1.4E-15 98.6 7.7 91 202-294 31-166 (171)
182 2v1m_A Glutathione peroxidase; 99.2 1.1E-10 3.6E-15 95.1 10.2 91 202-294 30-165 (169)
183 3kp9_A Vkorc1/thioredoxin doma 99.2 6.1E-12 2.1E-16 112.6 2.4 72 206-292 200-276 (291)
184 2bmx_A Alkyl hydroperoxidase C 99.2 7E-11 2.4E-15 99.4 8.6 92 202-294 44-168 (195)
185 1xvw_A Hypothetical protein RV 99.2 8E-11 2.7E-15 95.3 8.7 93 202-295 34-159 (160)
186 1zof_A Alkyl hydroperoxide-red 99.1 3E-11 1E-15 101.9 5.7 92 202-294 32-159 (198)
187 1hyu_A AHPF, alkyl hydroperoxi 99.1 1.5E-10 5.1E-15 112.0 11.2 97 185-293 101-197 (521)
188 2obi_A PHGPX, GPX-4, phospholi 99.1 1E-10 3.4E-15 97.3 8.6 91 202-294 46-182 (183)
189 2p31_A CL683, glutathione pero 99.1 6.9E-11 2.4E-15 98.2 7.5 91 202-294 48-179 (181)
190 2k6v_A Putative cytochrome C o 99.1 4.7E-11 1.6E-15 97.5 6.4 90 202-294 34-171 (172)
191 1we0_A Alkyl hydroperoxide red 99.1 5.9E-11 2E-15 99.0 6.9 92 202-294 30-155 (187)
192 1wjk_A C330018D20RIK protein; 99.1 1.1E-10 3.7E-15 88.0 7.5 79 202-294 14-94 (100)
193 2f8a_A Glutathione peroxidase 99.1 1.8E-10 6.1E-15 98.3 9.3 44 202-245 46-89 (208)
194 1qmv_A Human thioredoxin perox 99.1 2.6E-10 8.9E-15 96.0 8.8 92 202-294 33-161 (197)
195 2e7p_A Glutaredoxin; thioredox 99.1 7.6E-11 2.6E-15 90.5 4.4 82 202-294 18-106 (116)
196 2k8s_A Thioredoxin; dimer, str 99.1 2.8E-11 9.6E-16 87.1 1.7 61 206-271 3-64 (80)
197 3kij_A Probable glutathione pe 99.1 2.4E-10 8.1E-15 94.8 7.4 45 202-246 37-81 (180)
198 2gs3_A PHGPX, GPX-4, phospholi 99.1 4.6E-10 1.6E-14 93.5 8.8 91 202-294 48-184 (185)
199 1uul_A Tryparedoxin peroxidase 99.0 3.1E-10 1E-14 96.0 7.5 92 202-294 35-163 (202)
200 1ego_A Glutaredoxin; electron 99.0 7.3E-10 2.5E-14 80.0 8.0 75 206-293 2-81 (85)
201 1zye_A Thioredoxin-dependent p 99.0 4.8E-10 1.6E-14 96.4 8.1 92 202-294 55-183 (220)
202 2h01_A 2-Cys peroxiredoxin; th 99.0 3.2E-10 1.1E-14 95.0 6.5 92 202-294 30-157 (192)
203 2i81_A 2-Cys peroxiredoxin; st 99.0 6.4E-10 2.2E-14 95.2 8.0 92 202-294 51-178 (213)
204 3ztl_A Thioredoxin peroxidase; 99.0 1.2E-09 4.1E-14 94.0 9.2 92 202-294 68-196 (222)
205 2jsy_A Probable thiol peroxida 99.0 3.5E-09 1.2E-13 86.3 11.0 90 202-294 43-165 (167)
206 3gkn_A Bacterioferritin comigr 99.0 3E-09 1E-13 86.2 10.4 93 202-295 34-161 (163)
207 1xzo_A BSSCO, hypothetical pro 99.0 2.6E-09 9E-14 87.3 9.4 92 202-294 32-170 (174)
208 4f9z_D Endoplasmic reticulum r 98.9 2.5E-08 8.5E-13 85.8 14.2 106 183-294 113-223 (227)
209 2b7k_A SCO1 protein; metalloch 98.9 9E-09 3.1E-13 86.8 10.2 90 202-293 40-176 (200)
210 2i3y_A Epididymal secretory gl 98.8 2E-08 6.8E-13 86.1 11.3 90 202-294 55-209 (215)
211 3gyk_A 27KDA outer membrane pr 98.8 1.3E-08 4.4E-13 83.7 9.6 82 202-294 21-171 (175)
212 1xvq_A Thiol peroxidase; thior 98.8 4.5E-09 1.5E-13 86.7 6.8 87 202-292 43-164 (175)
213 1eej_A Thiol:disulfide interch 98.8 7.5E-09 2.6E-13 88.6 7.8 81 202-294 85-209 (216)
214 3ixr_A Bacterioferritin comigr 98.8 1.3E-08 4.6E-13 84.2 9.1 92 202-294 50-176 (179)
215 1t3b_A Thiol:disulfide interch 98.8 1.6E-08 5.3E-13 86.4 8.9 82 202-295 85-210 (211)
216 2c0d_A Thioredoxin peroxidase 98.8 9.9E-09 3.4E-13 88.3 7.7 92 202-294 55-182 (221)
217 3a2v_A Probable peroxiredoxin; 98.8 1.3E-08 4.3E-13 89.2 7.9 93 202-295 32-161 (249)
218 2r37_A Glutathione peroxidase 98.7 4.7E-08 1.6E-12 83.2 10.5 90 202-294 37-191 (207)
219 1n8j_A AHPC, alkyl hydroperoxi 98.7 2.3E-08 7.9E-13 83.4 8.3 92 202-294 29-154 (186)
220 4g2e_A Peroxiredoxin; redox pr 98.7 6.1E-09 2.1E-13 84.5 4.6 92 202-294 29-156 (157)
221 2pn8_A Peroxiredoxin-4; thiore 98.7 2.6E-08 8.9E-13 84.9 8.7 92 202-294 47-175 (211)
222 2l4c_A Endoplasmic reticulum r 98.7 1.2E-07 4.2E-12 74.1 11.5 98 183-294 21-122 (124)
223 2a4v_A Peroxiredoxin DOT5; yea 98.7 7.4E-08 2.5E-12 77.8 9.9 74 203-279 35-135 (159)
224 3me7_A Putative uncharacterize 98.7 7.2E-08 2.5E-12 79.1 9.6 92 202-294 27-160 (170)
225 3hd5_A Thiol:disulfide interch 98.7 9.1E-08 3.1E-12 80.1 9.8 43 202-245 24-66 (195)
226 1h75_A Glutaredoxin-like prote 98.7 2.3E-08 7.7E-13 71.5 5.0 71 207-293 3-75 (81)
227 3qpm_A Peroxiredoxin; oxidored 98.7 7.7E-08 2.6E-12 83.7 9.1 93 202-295 76-205 (240)
228 1r7h_A NRDH-redoxin; thioredox 98.6 1.1E-07 3.7E-12 66.6 7.8 69 207-292 3-74 (75)
229 3h93_A Thiol:disulfide interch 98.6 1.2E-07 4E-12 79.2 8.5 42 202-244 24-65 (192)
230 4gqc_A Thiol peroxidase, perox 98.6 1.3E-08 4.3E-13 83.4 2.4 99 192-294 25-158 (164)
231 1psq_A Probable thiol peroxida 98.6 2.8E-07 9.6E-12 74.8 9.7 90 202-294 41-163 (163)
232 1v58_A Thiol:disulfide interch 98.6 1.8E-07 6.3E-12 81.3 9.0 87 202-294 96-231 (241)
233 1nm3_A Protein HI0572; hybrid, 98.5 2.1E-07 7E-12 80.6 8.3 90 202-293 32-164 (241)
234 4f9z_D Endoplasmic reticulum r 98.5 2.5E-07 8.6E-12 79.5 8.5 98 183-294 9-110 (227)
235 3tjj_A Peroxiredoxin-4; thiore 98.5 1.6E-07 5.6E-12 82.4 7.0 93 202-295 90-219 (254)
236 1prx_A HORF6; peroxiredoxin, h 98.5 1.4E-06 4.7E-11 74.9 11.6 90 205-295 34-168 (224)
237 1tp9_A Peroxiredoxin, PRX D (t 98.5 3E-07 1E-11 74.7 7.0 69 202-271 34-138 (162)
238 3p7x_A Probable thiol peroxida 98.5 5.9E-07 2E-11 73.1 8.7 89 202-294 45-166 (166)
239 1q98_A Thiol peroxidase, TPX; 98.4 2.6E-07 8.9E-12 75.2 6.5 74 202-278 42-147 (165)
240 2yzh_A Probable thiol peroxida 98.4 8.5E-07 2.9E-11 72.4 8.8 90 202-294 46-170 (171)
241 2v2g_A Peroxiredoxin 6; oxidor 98.4 9.3E-07 3.2E-11 76.6 9.4 91 204-295 30-164 (233)
242 3uma_A Hypothetical peroxiredo 98.4 5.8E-07 2E-11 75.0 7.8 90 202-293 55-183 (184)
243 4hde_A SCO1/SENC family lipopr 98.4 3.6E-06 1.2E-10 68.9 11.5 92 202-294 31-168 (170)
244 2wfc_A Peroxiredoxin 5, PRDX5; 98.4 7.1E-07 2.4E-11 73.1 6.8 45 202-246 30-77 (167)
245 1xcc_A 1-Cys peroxiredoxin; un 98.3 9E-07 3.1E-11 75.9 7.2 90 205-295 34-165 (220)
246 1kte_A Thioltransferase; redox 98.3 2.3E-07 8E-12 69.5 2.8 59 206-271 13-77 (105)
247 1sji_A Calsequestrin 2, calseq 98.3 9.5E-06 3.2E-10 74.0 14.1 111 182-294 225-344 (350)
248 3mng_A Peroxiredoxin-5, mitoch 98.3 1.3E-06 4.4E-11 72.1 7.3 91 202-294 42-173 (173)
249 2hze_A Glutaredoxin-1; thiored 98.3 7.1E-07 2.4E-11 68.3 5.2 58 204-271 18-84 (114)
250 3zrd_A Thiol peroxidase; oxido 98.3 1.1E-06 3.7E-11 74.2 6.8 72 202-276 77-180 (200)
251 2klx_A Glutaredoxin; thioredox 98.2 2.8E-06 9.5E-11 61.7 6.7 55 206-271 7-64 (89)
252 3bj5_A Protein disulfide-isome 98.2 2.7E-05 9.2E-10 62.4 12.3 106 183-294 14-125 (147)
253 3ic4_A Glutaredoxin (GRX-1); s 98.2 2.7E-06 9.2E-11 62.1 5.8 71 206-292 13-91 (92)
254 2znm_A Thiol:disulfide interch 98.2 4E-06 1.4E-10 69.8 7.4 42 202-244 21-62 (195)
255 2pwj_A Mitochondrial peroxired 98.2 2.2E-06 7.4E-11 70.4 5.7 43 204-246 45-89 (171)
256 1un2_A DSBA, thiol-disulfide i 98.2 8E-07 2.7E-11 75.0 3.0 44 203-247 113-159 (197)
257 2ht9_A Glutaredoxin-2; thiored 98.2 3.5E-06 1.2E-10 67.6 6.6 66 191-271 40-111 (146)
258 2ec4_A FAS-associated factor 1 98.1 3.6E-05 1.2E-09 63.7 12.7 105 187-293 34-165 (178)
259 2lqo_A Putative glutaredoxin R 98.1 6.1E-06 2.1E-10 60.8 7.2 74 206-294 5-82 (92)
260 2cq9_A GLRX2 protein, glutared 98.1 4.3E-06 1.5E-10 65.6 6.7 67 190-271 17-89 (130)
261 2yan_A Glutaredoxin-3; oxidore 98.1 5.8E-06 2E-10 62.1 7.1 65 191-271 8-81 (105)
262 3us3_A Calsequestrin-1; calciu 98.1 1.8E-05 6.1E-10 72.8 11.7 111 182-294 227-346 (367)
263 3qmx_A Glutaredoxin A, glutare 98.1 8E-06 2.7E-10 61.0 7.3 60 202-271 13-76 (99)
264 1z6m_A Conserved hypothetical 98.1 1.7E-05 5.8E-10 64.8 10.0 42 202-244 26-69 (175)
265 2h8l_A Protein disulfide-isome 98.1 2.9E-05 9.9E-10 67.5 11.3 98 183-294 6-111 (252)
266 3c1r_A Glutaredoxin-1; oxidize 98.1 3.3E-06 1.1E-10 65.1 4.6 69 191-271 16-91 (118)
267 2rem_A Disulfide oxidoreductas 98.0 4.1E-05 1.4E-09 63.4 11.4 41 203-244 25-65 (193)
268 3nzn_A Glutaredoxin; structura 98.0 1.2E-05 4.1E-10 60.2 7.2 74 204-291 21-101 (103)
269 4dvc_A Thiol:disulfide interch 98.0 2.2E-05 7.6E-10 64.2 9.1 41 202-243 20-60 (184)
270 3gv1_A Disulfide interchange p 98.0 1.5E-05 5.1E-10 64.0 7.6 80 202-294 13-137 (147)
271 3ec3_A Protein disulfide-isome 98.0 3.4E-05 1.2E-09 67.1 10.5 99 183-294 6-113 (250)
272 1fov_A Glutaredoxin 3, GRX3; a 97.9 2.8E-05 9.5E-10 55.0 6.9 69 207-293 3-74 (82)
273 2khp_A Glutaredoxin; thioredox 97.9 2.4E-05 8.2E-10 56.9 6.4 55 206-271 7-65 (92)
274 2r2j_A Thioredoxin domain-cont 97.9 9.5E-05 3.2E-09 68.2 12.0 104 183-294 219-327 (382)
275 3rhb_A ATGRXC5, glutaredoxin-C 97.9 1.6E-05 5.6E-10 60.3 5.7 55 207-271 21-82 (113)
276 3sbc_A Peroxiredoxin TSA1; alp 97.9 4.2E-05 1.4E-09 65.3 8.5 92 202-295 51-180 (216)
277 3msz_A Glutaredoxin 1; alpha-b 97.8 8.7E-05 3E-09 53.2 7.9 74 205-294 4-85 (89)
278 3keb_A Probable thiol peroxida 97.7 9E-05 3.1E-09 63.5 8.3 87 202-294 47-174 (224)
279 3hz8_A Thiol:disulfide interch 97.7 5.5E-05 1.9E-09 63.1 5.8 43 202-245 23-65 (193)
280 1wik_A Thioredoxin-like protei 97.6 0.00016 5.4E-09 54.6 7.4 66 190-271 5-79 (109)
281 2h8l_A Protein disulfide-isome 97.6 0.00039 1.3E-08 60.3 10.8 103 183-294 114-228 (252)
282 3tue_A Tryparedoxin peroxidase 97.6 0.00035 1.2E-08 59.6 10.0 93 202-295 55-184 (219)
283 3ctg_A Glutaredoxin-2; reduced 97.6 8.1E-05 2.8E-09 58.2 5.0 69 191-271 28-103 (129)
284 3h8q_A Thioredoxin reductase 3 97.5 0.00012 4.2E-09 55.7 5.7 66 191-271 8-79 (114)
285 3ec3_A Protein disulfide-isome 97.5 0.0017 5.8E-08 56.2 12.8 103 183-294 116-226 (250)
286 3l9v_A Putative thiol-disulfid 97.4 7.7E-05 2.6E-09 62.0 3.3 42 203-245 14-58 (189)
287 4eo3_A Bacterioferritin comigr 97.4 0.00033 1.1E-08 63.3 7.0 88 202-294 23-137 (322)
288 4f82_A Thioredoxin reductase; 97.2 0.00079 2.7E-08 55.5 7.6 51 192-246 40-93 (176)
289 3feu_A Putative lipoprotein; a 97.0 0.00038 1.3E-08 57.6 3.8 39 203-244 22-60 (185)
290 3ed3_A Protein disulfide-isome 97.0 0.0028 9.5E-08 56.4 9.2 103 181-292 141-263 (298)
291 3l4n_A Monothiol glutaredoxin- 97.0 0.00075 2.6E-08 52.5 4.7 69 191-271 5-79 (127)
292 3gha_A Disulfide bond formatio 96.9 0.0056 1.9E-07 51.2 10.1 43 202-244 28-72 (202)
293 3f4s_A Alpha-DSBA1, putative u 96.9 0.011 3.8E-07 50.4 12.0 42 202-243 38-81 (226)
294 2wci_A Glutaredoxin-4; redox-a 96.8 0.00097 3.3E-08 52.5 4.2 67 191-271 26-99 (135)
295 3q6o_A Sulfhydryl oxidase 1; p 96.8 0.015 5E-07 49.7 11.6 96 187-294 142-238 (244)
296 3ipz_A Monothiol glutaredoxin- 96.7 0.003 1E-07 47.5 6.0 60 202-271 16-82 (109)
297 1nm3_A Protein HI0572; hybrid, 96.5 0.0057 1.9E-07 52.3 7.4 58 204-271 169-228 (241)
298 1aba_A Glutaredoxin; electron 96.5 0.0061 2.1E-07 43.5 6.3 56 207-271 2-74 (87)
299 2axo_A Hypothetical protein AT 96.4 0.031 1.1E-06 48.9 11.4 80 203-293 42-140 (270)
300 3l9s_A Thiol:disulfide interch 96.4 0.0028 9.7E-08 52.6 4.5 41 203-244 21-64 (191)
301 3gx8_A Monothiol glutaredoxin- 96.3 0.0091 3.1E-07 45.8 6.8 59 203-271 15-83 (121)
302 1t1v_A SH3BGRL3, SH3 domain-bi 96.3 0.0085 2.9E-07 43.4 6.0 54 207-271 4-69 (93)
303 3zyw_A Glutaredoxin-3; metal b 96.3 0.007 2.4E-07 45.7 5.7 58 203-271 15-80 (111)
304 2wem_A Glutaredoxin-related pr 96.3 0.0083 2.8E-07 45.9 6.1 64 193-271 13-85 (118)
305 2ct6_A SH3 domain-binding glut 96.3 0.012 4E-07 44.4 6.9 56 205-271 8-81 (111)
306 3t58_A Sulfhydryl oxidase 1; o 95.7 0.037 1.3E-06 53.1 9.4 97 185-293 140-237 (519)
307 1xiy_A Peroxiredoxin, pfaop; a 95.6 0.024 8.2E-07 46.7 6.6 92 202-294 42-180 (182)
308 3c7m_A Thiol:disulfide interch 95.5 0.028 9.5E-07 45.9 6.5 41 203-244 17-58 (195)
309 1u6t_A SH3 domain-binding glut 95.0 0.067 2.3E-06 41.0 6.9 58 206-265 1-69 (121)
310 2xhf_A Peroxiredoxin 5; oxidor 93.3 0.065 2.2E-06 43.6 3.9 45 202-246 41-87 (171)
311 2ywb_A GMP synthase [glutamine 93.1 0.044 1.5E-06 52.4 2.9 83 33-117 295-383 (503)
312 2wul_A Glutaredoxin related pr 92.5 0.21 7.3E-06 38.0 5.4 68 190-271 10-85 (118)
313 2kok_A Arsenate reductase; bru 91.9 0.49 1.7E-05 35.7 7.0 34 206-246 6-39 (120)
314 3bci_A Disulfide bond protein 91.7 0.4 1.4E-05 38.7 6.7 42 202-243 10-53 (186)
315 2jad_A Yellow fluorescent prot 91.7 0.093 3.2E-06 47.8 3.0 60 207-271 263-327 (362)
316 3gn3_A Putative protein-disulf 91.6 0.32 1.1E-05 39.7 5.9 42 202-244 13-55 (182)
317 1t4y_A Adaptive-response senso 91.5 3.2 0.00011 30.6 10.7 81 206-291 13-94 (105)
318 2dpl_A GMP synthetase, GMP syn 90.6 0.25 8.5E-06 44.0 4.7 70 43-116 120-189 (308)
319 2in3_A Hypothetical protein; D 90.1 0.39 1.3E-05 39.7 5.3 43 249-294 166-208 (216)
320 3gmf_A Protein-disulfide isome 89.7 0.81 2.8E-05 38.0 6.9 43 202-244 14-58 (205)
321 3tdg_A DSBG, putative uncharac 88.6 0.37 1.3E-05 42.1 4.1 30 202-231 146-175 (273)
322 2x8g_A Thioredoxin glutathione 87.9 0.55 1.9E-05 45.3 5.3 66 191-271 9-80 (598)
323 3kzq_A Putative uncharacterize 85.8 0.99 3.4E-05 37.1 5.1 43 249-294 159-201 (208)
324 2pg3_A Queuosine biosynthesis 84.2 0.64 2.2E-05 39.2 3.2 43 82-125 155-203 (232)
325 1wy5_A TILS, hypothetical UPF0 83.8 0.65 2.2E-05 41.3 3.2 101 6-109 74-190 (317)
326 2g2q_A Glutaredoxin-2; thiored 83.2 2.2 7.4E-05 32.1 5.3 83 204-293 2-113 (124)
327 1z3e_A Regulatory protein SPX; 83.2 1.5 5E-05 33.6 4.7 34 207-247 3-36 (132)
328 3bl5_A Queuosine biosynthesis 82.0 0.65 2.2E-05 38.4 2.4 45 81-125 151-200 (219)
329 3bci_A Disulfide bond protein 80.5 1.7 5.7E-05 34.9 4.3 38 249-294 139-176 (186)
330 3feu_A Putative lipoprotein; a 79.9 1.9 6.3E-05 34.9 4.4 41 249-294 142-182 (185)
331 3l78_A Regulatory protein SPX; 79.5 2.4 8.1E-05 31.9 4.6 78 207-293 2-85 (120)
332 1kor_A Argininosuccinate synth 78.6 1.4 4.7E-05 40.7 3.6 65 35-109 97-166 (400)
333 1rw1_A Conserved hypothetical 76.7 2.1 7.2E-05 31.8 3.5 33 207-246 2-34 (114)
334 3fz4_A Putative arsenate reduc 75.3 4.6 0.00016 30.4 5.1 78 206-292 4-89 (120)
335 3k32_A Uncharacterized protein 74.3 0.51 1.7E-05 39.1 -0.6 65 27-103 86-153 (203)
336 3c7m_A Thiol:disulfide interch 71.2 2.1 7.3E-05 34.2 2.5 41 249-294 152-192 (195)
337 3gn3_A Putative protein-disulf 70.1 4.6 0.00016 32.6 4.3 36 250-291 145-181 (182)
338 3ktb_A Arsenical resistance op 69.8 9.9 0.00034 28.1 5.6 51 235-291 42-101 (106)
339 3hz8_A Thiol:disulfide interch 69.4 7.2 0.00025 31.5 5.4 38 249-294 144-181 (193)
340 1ni5_A Putative cell cycle pro 65.0 5.1 0.00017 37.1 4.0 93 5-109 62-177 (433)
341 3kgk_A Arsenical resistance op 64.3 9.8 0.00033 28.3 4.6 52 235-292 39-99 (110)
342 3gmf_A Protein-disulfide isome 64.2 6.5 0.00022 32.4 4.1 34 254-294 162-195 (205)
343 3kzq_A Putative uncharacterize 64.1 12 0.00041 30.4 5.8 38 205-243 3-40 (208)
344 1hyu_A AHPF, alkyl hydroperoxi 63.9 20 0.00067 33.8 8.0 77 202-293 17-93 (521)
345 3a2k_A TRNA(Ile)-lysidine synt 62.8 4 0.00014 38.2 2.9 93 6-109 68-188 (464)
346 3gkx_A Putative ARSC family re 62.7 5 0.00017 30.1 2.9 35 206-247 5-39 (120)
347 1wwj_A Circadian clock protein 61.8 2.3 7.8E-05 31.4 0.7 61 204-266 7-67 (105)
348 3gl5_A Putative DSBA oxidoredu 61.6 10 0.00035 31.9 5.0 39 249-294 173-211 (239)
349 3l9v_A Putative thiol-disulfid 60.7 9 0.00031 30.8 4.3 20 249-271 135-154 (189)
350 2in3_A Hypothetical protein; D 59.9 23 0.00078 28.5 6.8 39 204-243 7-45 (216)
351 1xng_A NH(3)-dependent NAD(+) 58.8 5.9 0.0002 34.0 3.0 26 82-107 150-175 (268)
352 2imf_A HCCA isomerase, 2-hydro 58.6 6.3 0.00021 32.0 3.0 38 249-294 157-194 (203)
353 2d8c_A Phosphatidylcholine:cer 57.8 5 0.00017 29.1 2.0 23 84-106 13-35 (97)
354 3lyk_A Stringent starvation pr 56.2 46 0.0016 26.6 8.1 56 204-265 4-59 (216)
355 3f0i_A Arsenate reductase; str 55.0 8.4 0.00029 28.8 3.0 34 206-246 5-38 (119)
356 2gle_A Neurabin-1; SAM domain, 54.2 3.4 0.00012 28.0 0.6 29 86-117 2-30 (74)
357 1un2_A DSBA, thiol-disulfide i 54.0 7.9 0.00027 31.6 2.9 20 249-271 40-59 (197)
358 1s3c_A Arsenate reductase; ARS 54.0 7.6 0.00026 30.0 2.7 78 207-293 4-87 (141)
359 3l9s_A Thiol:disulfide interch 53.9 16 0.00055 29.4 4.8 20 249-271 141-160 (191)
360 3bs7_A Protein aveugle; sterIl 53.9 4.2 0.00014 27.9 1.0 31 86-117 1-31 (78)
361 2hma_A Probable tRNA (5-methyl 53.2 7.9 0.00027 35.2 3.0 80 27-107 105-193 (376)
362 3rdw_A Putative arsenate reduc 53.0 6.7 0.00023 29.4 2.1 78 207-293 7-91 (121)
363 2e18_A NH(3)-dependent NAD(+) 51.5 6.5 0.00022 33.4 2.1 29 82-110 147-175 (257)
364 1kw4_A Polyhomeotic; SAM domai 48.6 8.3 0.00028 27.4 1.9 28 86-116 12-40 (89)
365 1gpm_A GMP synthetase, XMP ami 48.0 7.4 0.00025 37.0 2.0 35 82-116 370-404 (525)
366 3bq7_A Diacylglycerol kinase d 47.5 9.7 0.00033 26.3 2.1 30 85-117 4-33 (81)
367 4dej_A Glutathione S-transfera 45.2 83 0.0029 25.5 8.1 57 203-265 9-66 (231)
368 3fz5_A Possible 2-hydroxychrom 45.0 16 0.00053 29.6 3.4 37 249-293 163-199 (202)
369 1s3a_A NADH-ubiquinone oxidore 41.8 94 0.0032 22.2 7.0 74 206-294 21-97 (102)
370 3tqi_A GMP synthase [glutamine 41.3 9.3 0.00032 36.3 1.6 36 82-117 372-407 (527)
371 1v85_A Similar to ring finger 39.3 12 0.00041 26.5 1.5 24 82-105 11-34 (91)
372 2a2p_A Selenoprotein M, SELM p 39.2 33 0.0011 26.1 4.0 34 260-293 55-88 (129)
373 3rpp_A Glutathione S-transfera 38.8 28 0.00095 29.0 4.0 41 249-293 172-212 (234)
374 2imf_A HCCA isomerase, 2-hydro 38.4 47 0.0016 26.6 5.3 35 206-241 2-36 (203)
375 2r4v_A XAP121, chloride intrac 37.0 1.1E+02 0.0039 24.9 7.7 67 211-293 26-92 (247)
376 1r4w_A Glutathione S-transfera 36.5 32 0.0011 28.2 4.0 41 249-293 172-212 (226)
377 3bs5_B Connector enhancer of k 36.4 17 0.0006 24.7 2.0 19 86-104 2-20 (80)
378 2ahe_A Chloride intracellular 35.5 1.8E+02 0.0061 24.2 8.8 67 211-293 31-97 (267)
379 4hoj_A REGF protein; GST, glut 34.6 92 0.0031 24.6 6.5 53 207-265 4-56 (210)
380 3lyp_A Stringent starvation pr 33.5 1.4E+02 0.005 23.4 7.6 53 207-265 9-61 (215)
381 2e8o_A SAM domain and HD domai 33.1 15 0.00052 26.6 1.3 33 84-117 23-55 (103)
382 3bs5_A Protein aveugle; sterIl 33.1 14 0.00047 27.1 1.0 33 82-117 17-51 (106)
383 2der_A TRNA-specific 2-thiouri 30.8 27 0.00094 31.6 2.8 79 27-107 113-201 (380)
384 1pk1_B Sex COMB on midleg CG94 30.5 24 0.00082 24.9 1.9 19 86-104 12-30 (89)
385 2eap_A Lymphocyte cytosolic pr 30.3 14 0.00048 26.2 0.6 27 82-108 13-39 (90)
386 3p52_A NH(3)-dependent NAD(+) 30.2 32 0.0011 29.1 3.0 23 84-106 153-175 (249)
387 1yy7_A SSPA, stringent starvat 29.7 1.9E+02 0.0066 22.6 7.8 54 206-265 10-63 (213)
388 1k0m_A CLIC1, NCC27, chloride 29.2 1.7E+02 0.0059 23.7 7.5 47 213-265 22-68 (241)
389 3ir4_A Glutaredoxin 2; glutath 28.3 64 0.0022 25.7 4.5 52 207-265 4-55 (218)
390 2f3n_A SH3 and multiple ankyri 27.7 32 0.0011 23.3 2.1 27 88-117 2-28 (76)
391 1v32_A AT5G08430, hypothetical 25.7 23 0.00079 25.8 1.1 13 94-106 42-54 (101)
392 4f03_A Glutathione transferase 25.3 65 0.0022 26.1 4.1 31 212-247 19-49 (253)
393 1wwv_A Connector enhancer of k 25.1 15 0.00051 26.2 -0.0 21 83-103 6-26 (91)
394 3vln_A GSTO-1, glutathione S-t 24.0 2E+02 0.007 23.0 7.0 55 206-266 23-77 (241)
395 3lxz_A Glutathione S-transfera 24.0 2.3E+02 0.0079 22.3 7.3 53 207-266 3-55 (229)
396 1uhr_A SWI/SNF related, matrix 23.9 36 0.0012 24.2 1.9 13 94-106 34-46 (93)
397 1v31_A Hypothetical protein RA 23.8 37 0.0013 24.1 1.9 13 94-106 34-46 (93)
398 3fiu_A NH(3)-dependent NAD(+) 23.4 43 0.0015 28.3 2.6 23 84-106 162-184 (249)
399 1z9h_A Membrane-associated pro 23.4 1.3E+02 0.0043 25.4 5.7 53 204-266 12-66 (290)
400 2c5s_A THII, probable thiamine 23.1 34 0.0012 31.3 2.0 54 44-106 291-344 (413)
401 3rbt_A Glutathione transferase 22.3 2.4E+02 0.008 22.8 7.1 55 206-266 26-80 (246)
402 2l5y_A Stromal interaction mol 21.7 24 0.00083 27.7 0.5 31 84-117 74-105 (150)
403 1hmj_A RPB5, protein (subunit 21.1 1.5E+02 0.0051 20.4 4.4 51 4-61 16-67 (78)
404 3uow_A GMP synthetase; structu 20.3 40 0.0014 32.2 1.9 36 82-117 401-436 (556)
405 2gsq_A Squid GST, glutathione 20.1 2.9E+02 0.0099 21.2 7.0 53 207-266 3-55 (202)
No 1
>2goy_A Adenosine phosphosulfate reductase; iron sulfur cluster, nucleotide binding, thiosulfonate intermediate, oxidoreductase; HET: ADX; 2.70A {Pseudomonas aeruginosa}
Probab=100.00 E-value=4.3e-40 Score=295.07 Aligned_cols=153 Identities=58% Similarity=1.204 Sum_probs=121.8
Q ss_pred CCCHHHHHHHHHhcCCCCccccChhhhcchhchHHHHHHHhcCCEEEEeeeccCCCcccCCCCceecCCccccccCCCCC
Q 022560 2 FPDAVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRAWITGQRKDQSPGTRSEIPVVQVDPVFEGLEGGVGS 81 (295)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~K~~pl~~~l~~~~~~~~G~R~~es~~~R~~~~~~~~~~~~~~~~~~~~~ 81 (295)
.|+...++++.+..|+..||..++..||.++|++||+++++++++|++|+|++|++..|+.+++++.|+.+. .+.++
T Consensus 113 ~~~~~~~~~~~~~~g~~~~~~~~~~~cc~~~K~~pl~r~l~~~~~~itG~r~dds~~~R~~~~~~~~d~~~~---~~~~g 189 (275)
T 2goy_A 113 SPDPRLLEPLVKEKGLFSFYRDGHGECCGIRKIEPLKRKLAGVRAWATGQRRDQSPGTRSQVAVLEIDGAFS---TPEKP 189 (275)
T ss_dssp CCCHHHHHHHHHHHCSCHHHHHCTHHHHHHHTHHHHHHHHHTCSEEECCCCGGGTTSCSCCCCSEEECTTTC---CSSSC
T ss_pred eCCccCHHHHHHHhCCCCccccCHHHHHHHHHHHHHHHHHHhcCchhcCchhhhhhhhhhhCcccccccccc---cCCCC
Confidence 456556777788888877888888899999999999999999999999999999833999999999875221 12356
Q ss_pred EEEEeeCCCCCHHHHHHHHHHCCCCCCccccCCccccCCCCCCCCCCCCccccccccccccCCccccCCCCCCCcc
Q 022560 82 LVKWNPVANVKGNDIWNFLRTMDVPINSLHSQGYISIGCEPCTRPVLPGQHEREGRWWWEDAKAKECGLHKGNIKQ 157 (295)
Q Consensus 82 ~~~~~Pi~~W~~~dvw~y~~~~~~p~~~ly~~g~~sigc~~ct~~~~~~~~~r~gr~~w~~~~~~ecglh~~~i~~ 157 (295)
.++++||++|+.+|||+|+++++|||||||++||+||||++||.|+.+++++|+|||||++..|+|||||...+..
T Consensus 190 ~~~i~PL~~wt~~dV~~Yi~~~~lp~~~Ly~~Gy~siGC~~Ct~~~~~g~~~R~gRw~w~~~~k~ecGlh~~~~~~ 265 (275)
T 2goy_A 190 LYKFNPLSSMTSEEVWGYIRMLELPYNSLHERGYISIGCEPCTRPVLPNQHEREGRWWWEEATHKECGLHAGNLIS 265 (275)
T ss_dssp CEEECTTTTCCHHHHHHHHHHTTCCCCGGGGGTCSSCCCGGGBCCCCTTCCGGGGBSTTC----------------
T ss_pred eEEEechHhCCHHHHHHHHHHhCCCCChHHHcCCCCCCCccCCCCCCCCCccccCccccCCCCCccCCCCcCcchh
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999765533
No 2
>2oq2_A Phosphoadenosine phosphosulfate reductase; sulfate reduction, PAPS reductase, oxidoreductase; HET: A3P; 2.10A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-37 Score=275.86 Aligned_cols=133 Identities=33% Similarity=0.583 Sum_probs=117.1
Q ss_pred HHHHHHhcCCCCccccChhhhcchhchHHHHHHHhcCC--EEEEeeeccCCCcccCCCCceecCCccccccCCCCCEEEE
Q 022560 8 VQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLR--AWITGQRKDQSPGTRSEIPVVQVDPVFEGLEGGVGSLVKW 85 (295)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~c~~~~K~~pl~~~l~~~~--~~~~G~R~~es~~~R~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (295)
++++++++|. .+|..++..||.++|++||++++++++ +|++|+|++|+ .+|+.++++++|+ +++.+++
T Consensus 115 ~~~~~~~~G~-~~~~~~~~~cc~~~K~~pl~~~l~~~g~~~~~tG~R~dds-~~R~~~~~~~~~~--------~~~~~ki 184 (261)
T 2oq2_A 115 EADFASKYGD-FLWEKDDDKYDYLAKVEPAHRAYKELHISAVFTGRRKSQG-SARSQLSIIEIDE--------LNGILKI 184 (261)
T ss_dssp HHHHHHHHCT-THHHHCHHHHHHHHTHHHHHHHHHHTTCSEEECCCCGGGC-GGGGGCCSEEEET--------TTTEEEE
T ss_pred HHHHHHHhCC-CccccChHHHHHHHhHHHHHHHHHHcCCCEEEEeccccch-HHHccCCceeecC--------CCCeEEE
Confidence 5567777886 357778899999999999999999664 99999999999 5999999998875 2568999
Q ss_pred eeCCCCCHHHHHHHHHHCCCCCCccccCCccccCCCCCCCCCCCCccccccccccccCCccccCCCC
Q 022560 86 NPVANVKGNDIWNFLRTMDVPINSLHSQGYISIGCEPCTRPVLPGQHEREGRWWWEDAKAKECGLHK 152 (295)
Q Consensus 86 ~Pi~~W~~~dvw~y~~~~~~p~~~ly~~g~~sigc~~ct~~~~~~~~~r~gr~~w~~~~~~ecglh~ 152 (295)
|||++|+.+|||+|++.++|||||||++||+||||++||.++.++.++|+||| ++..|+|||||.
T Consensus 185 ~PL~~wt~~dV~~Yi~~~~lp~~pLy~~Gy~siGC~~ct~~~~~~~~eR~gRw--~~~~k~ecGlh~ 249 (261)
T 2oq2_A 185 NPLINWTFEQVKQYIDANNVPYNELLDLGYRSIGDYHSTQPVKEGEDERAGRW--KGKAKTECGIHE 249 (261)
T ss_dssp CTTTTCCHHHHHHHHHHHTCCCCGGGGGTCSSCCBGGGCCCCCTTSCTTTTTC-------CCCTTTC
T ss_pred echHhCCHHHHHHHHHHcCCCCCchhhCCCCCCCCcCCCCcCCCCCCcccccc--CCCCCcccCCCC
Confidence 99999999999999999999999999999999999999999999999999996 678899999995
No 3
>2o8v_A Phosphoadenosine phosphosulfate reductase; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=100.00 E-value=1.3e-34 Score=256.28 Aligned_cols=131 Identities=32% Similarity=0.617 Sum_probs=101.2
Q ss_pred HHHHHHhcCCCCccccC---hhhhcchhchHHHHHHHhcCC--EEEEeeeccCCCcccCCCCceecCCccccccCCCCCE
Q 022560 8 VQALVRSKGLFSFYEDG---HQECCRVRKVRPLRRALKGLR--AWITGQRKDQSPGTRSEIPVVQVDPVFEGLEGGVGSL 82 (295)
Q Consensus 8 ~~~~~~~~~~~~~~~~~---~~~c~~~~K~~pl~~~l~~~~--~~~~G~R~~es~~~R~~~~~~~~~~~~~~~~~~~~~~ 82 (295)
+.++++++| .+|..+ +..||.++|++||++++++++ +|++|.|++|+ ..|+.++.++.. ++.
T Consensus 110 ~~~~~~~~g--~~~~~~~~~~~~cc~~~K~~pl~~~l~~~~~~~~~tG~r~dds-~~R~~l~~~~~~----------~~~ 176 (252)
T 2o8v_A 110 AAWQEARYG--KLWEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQS-GSRANLPVLAIQ----------RGV 176 (252)
T ss_dssp HHHHHHHTC--CGGGSHHHHHHHHHHHHTHHHHHHHHHHTTCSEEEECCCSTTT-TCCTTSCSEEES----------SSS
T ss_pred HHHHHHHcC--CccccCCchHHHHHHHHHHHHHHHHHHhcCCcEEEEecccccc-cccccCceeecC----------CCe
Confidence 445666677 345543 356999999999999999987 59999999999 499999998643 257
Q ss_pred EEEeeCCCCCHHHHHHHHHHCCCCCCccccCCccccCCCCCCCCCCCCccccccccccccCCccccCCCCCC
Q 022560 83 VKWNPVANVKGNDIWNFLRTMDVPINSLHSQGYISIGCEPCTRPVLPGQHEREGRWWWEDAKAKECGLHKGN 154 (295)
Q Consensus 83 ~~~~Pi~~W~~~dvw~y~~~~~~p~~~ly~~g~~sigc~~ct~~~~~~~~~r~gr~~w~~~~~~ecglh~~~ 154 (295)
++++||++|+.+|||+|+++++|||||||++||+||||++||+++.+++++|+||| .+ .|+|||||...
T Consensus 177 ~~i~PL~~wt~~dV~~y~~~~~lp~~~Ly~~Gy~siGC~~Ct~~~~~g~~~r~gRw--~~-~k~ecglh~~~ 245 (252)
T 2o8v_A 177 FKVLPIIDWDNRTIYQYLQKHGLKYHPLWDEGYLSVGDTHTTRKWEPGMAEEETRF--FG-LKRECGLHEGL 245 (252)
T ss_dssp EEECGGGSCCHHHHHHHHHHTTCCCCTTTTTTCSSCCBCTTTCC-----------------CCSCCCSCCC-
T ss_pred EEEechhhCCHHHHHHHHHHcCCCCChHHhCCCCCCCCcCcCCcCCCCCCcccccc--CC-CCccCCCCCCc
Confidence 89999999999999999999999999999999999999999999999999999997 45 99999999753
No 4
>3fwk_A FMN adenylyltransferase; FAD biosynthesis, alpha/beta protein, rossmann- like fold, APO-form, extended loop region; HET: BGC; 1.20A {Candida glabrata} PDB: 3g59_A* 3g5a_A* 3g6k_A*
Probab=99.95 E-value=1e-28 Score=221.11 Aligned_cols=108 Identities=19% Similarity=0.264 Sum_probs=91.4
Q ss_pred HHHHHHhcCCCCcc-c-----cChhhhcchhchHHHHHHHhcCCEEEEeeeccCCCcccCCCCceecCCccccccCCCCC
Q 022560 8 VQALVRSKGLFSFY-E-----DGHQECCRVRKVRPLRRALKGLRAWITGQRKDQSPGTRSEIPVVQVDPVFEGLEGGVGS 81 (295)
Q Consensus 8 ~~~~~~~~~~~~~~-~-----~~~~~c~~~~K~~pl~~~l~~~~~~~~G~R~~es~~~R~~~~~~~~~~~~~~~~~~~~~ 81 (295)
+++..++||++..- . ...+.||.++|++| .++|||+|+||++ + +|+++++++.+. .+|++
T Consensus 125 ~d~~~~~ygL~L~v~~p~~~~~~~~~cc~~~K~~P------~~~AwitG~RR~e-~-~Ra~l~~~e~~d------~~w~~ 190 (308)
T 3fwk_A 125 IEETSLRYSLSLYESDRDKCETMAEAFETFLQVFP------ETKAIVIGIRHTD-P-FGEHLKPIQKTD------ANWPD 190 (308)
T ss_dssp HHHHHHHTTEEEEECCTTSCCCHHHHHHHHHHHCT------TCCEEECCCCTTS-T-TCTTCCSEEECC------TTSCS
T ss_pred HHHHHHHhCCcEEEeCCCCCHHHHHHHHHHHHhCC------CCCEEEEEeecCC-c-ccCCCCeeeccC------CCCCC
Confidence 45667888874311 1 12358999999988 4889999999995 5 999999998753 36889
Q ss_pred EEEEeeCCCCCHHHHHHHHHHCCCCCCccccCCccccCCCCCCCCCCC
Q 022560 82 LVKWNPVANVKGNDIWNFLRTMDVPINSLHSQGYISIGCEPCTRPVLP 129 (295)
Q Consensus 82 ~~~~~Pi~~W~~~dvw~y~~~~~~p~~~ly~~g~~sigc~~ct~~~~~ 129 (295)
++|+|||++||+.|||+||++++|||||||++||+||||++||+|...
T Consensus 191 ~iKVnPL~dWT~~DVW~YI~~~~LPynpLYd~GY~SIGC~~CT~pnp~ 238 (308)
T 3fwk_A 191 FYRLQPLLHWNLANIWSFLLYSNEPICELYRYGFTSLGNVEETLPNPH 238 (308)
T ss_dssp CEEECTTTTCCHHHHHHHHHHHTCCCCGGGGGTCSSCCCTTTBCCCGG
T ss_pred eEEEechhhCCHHHHHHHHHHcCCCCCcHHhcCCCCCCCCccCCCChh
Confidence 999999999999999999999999999999999999999999997653
No 5
>1zun_A Sulfate adenylyltransferase subunit 2; beta barrel, switch domain, heterodimer, pyrophosphate, G protein; HET: GDP AGS; 2.70A {Pseudomonas syringae} SCOP: c.26.2.2
Probab=99.92 E-value=9.4e-26 Score=206.06 Aligned_cols=116 Identities=27% Similarity=0.443 Sum_probs=70.7
Q ss_pred ccChhhhcchhchHHHHHHHhc--CCEEEEeeeccCCCcccCCCCcee-------cCCcccc-----c---cCCCCCEEE
Q 022560 22 EDGHQECCRVRKVRPLRRALKG--LRAWITGQRKDQSPGTRSEIPVVQ-------VDPVFEG-----L---EGGVGSLVK 84 (295)
Q Consensus 22 ~~~~~~c~~~~K~~pl~~~l~~--~~~~~~G~R~~es~~~R~~~~~~~-------~~~~~~~-----~---~~~~~~~~~ 84 (295)
..++..||+++|++||+++|++ +++|++|.|+||+ .+|+.+++++ +++.+++ . ....++.++
T Consensus 123 ~~~~~~cc~~~K~~pL~~~l~e~g~~~i~tG~R~Des-~~Ra~~~~~~~r~~~~~~d~~~~rp~l~~~~n~~~~~g~~~~ 201 (325)
T 1zun_A 123 THGSAKHTDIMKTEGLKQALDKHGFDAAFGGARRDEE-KSRAKERVYSFRDSKHRWDPKNQRPELWNVYNGNVNKGESIR 201 (325)
T ss_dssp ---CCHHHHHHTHHHHHHHHHHHTCSEEECCCCTTSS-GGGGGCCSEEEECTTCCBCGGGCCCCCSSCCCCCCCTTCEEE
T ss_pred ccChHHHHHHHHHHHHHHHHHHcCCCEEEEecccchh-hhhhcccceeccccccccCccccCcchhhhccccccCCCeEE
Confidence 3455679999999999999995 6799999999998 5999999987 3332110 0 000124899
Q ss_pred EeeCCCCCHHHHHHHHHHCCCCCCccc-------------------cCC------------------ccccCCCCCCCCC
Q 022560 85 WNPVANVKGNDIWNFLRTMDVPINSLH-------------------SQG------------------YISIGCEPCTRPV 127 (295)
Q Consensus 85 ~~Pi~~W~~~dvw~y~~~~~~p~~~ly-------------------~~g------------------~~sigc~~ct~~~ 127 (295)
++||++|++.|||+|++.++||||||| ++| |+||||++||.++
T Consensus 202 i~PLl~wt~~dIw~Yi~~~~lp~~~LY~~~~r~~~~r~g~~~~~~~~~g~~~~~~~~~~~~~~~~~ry~siGc~~cT~~v 281 (325)
T 1zun_A 202 VFPLSNWTELDIWQYIYLEGIPIVPLYFAAERDVIEKNGTLIMIDDERILEHLTDEEKSRIVKKKVRFRTLGCYPLTGAV 281 (325)
T ss_dssp ECTTTTCCHHHHHHHHHHHTCCCCSCCSCC--------------------------------------------------
T ss_pred EEchhhCCHHHHHHHHHHhCCCcchhhhcccccccccCCceeccchhhcccccCCCccccccccccccCCcCCcccCCcc
Confidence 999999999999999999999999999 689 9999999999998
Q ss_pred CCCc---------------ccccccc
Q 022560 128 LPGQ---------------HEREGRW 138 (295)
Q Consensus 128 ~~~~---------------~~r~gr~ 138 (295)
.+++ .||.||+
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~er~~R~ 307 (325)
T 1zun_A 282 ESEATSLTDIIQEMLLTRTSERQGRV 307 (325)
T ss_dssp --------------------------
T ss_pred CCCCccHHHHHHHHHhcCCCcccccc
Confidence 7653 5888885
No 6
>2wsi_A FAD synthetase; transferase, nucleotidyltransferase, nucleotide-binding; HET: FAD; 1.90A {Saccharomyces cerevisiae}
Probab=99.91 E-value=9.1e-25 Score=198.10 Aligned_cols=127 Identities=22% Similarity=0.283 Sum_probs=92.6
Q ss_pred HHHHHHHhcCCCCccccChhhhcchhchHHHHHHHhc---CCEEEEeeeccCCCcccCCCCceecCCccccccCCCCCEE
Q 022560 7 EVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKG---LRAWITGQRKDQSPGTRSEIPVVQVDPVFEGLEGGVGSLV 83 (295)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~c~~~~K~~pl~~~l~~---~~~~~~G~R~~es~~~R~~~~~~~~~~~~~~~~~~~~~~~ 83 (295)
-++++.+++|+.. ..-..+.|-...--+.+.+.++. .+++|+|+|++|+ .+|+..++...| .+|++++
T Consensus 119 fv~~~~~~ygl~l-~v~~~~~~~~~~l~~~~~~~~k~~p~~~aii~G~Rrdds-~~r~l~~~~~~d-------~~~p~~~ 189 (306)
T 2wsi_A 119 FVLETSERYCLSL-YESQRQSGASVNMADAFRDFIKIYPETEAIVIGIRHTDP-FGEALKPIQRTD-------SNWPDFM 189 (306)
T ss_dssp HHHHHHHHTTEEE-EECCC-----CCHHHHHHHHHHHCTTCCEEECCCCCCSS-SCCCCCSEEECC-------TTSCSCE
T ss_pred HHHHHHHHcCCCE-EEEeCCccccccHHHHHHHHHhhCCCCcEEEEEEecccc-cccccCceeccC-------CCCCCcE
Confidence 4556677888742 22222223211111233444443 3599999999998 588777654444 3788999
Q ss_pred EEeeCCCCCHHHHHHHHHHCCCCCCccccCCccccCCCCCCCCCCC---Ccccccccccccc
Q 022560 84 KWNPVANVKGNDIWNFLRTMDVPINSLHSQGYISIGCEPCTRPVLP---GQHEREGRWWWED 142 (295)
Q Consensus 84 ~~~Pi~~W~~~dvw~y~~~~~~p~~~ly~~g~~sigc~~ct~~~~~---~~~~r~gr~~w~~ 142 (295)
|+|||++|++.|||.||+.++|||||||++||+||||++||+|... +.+.+.++|||+.
T Consensus 190 ri~PL~dWt~~DVw~Yi~~~~lpy~pLYd~GY~SiGc~~cT~pnp~l~~~~~~~~~~~~we~ 251 (306)
T 2wsi_A 190 RLQPLLHWDLTNIWSFLLYSNEPICGLYGKGFTSIGGINNSLPNPHLRKDSNNPALHFEWEI 251 (306)
T ss_dssp EECTTTTCCHHHHHHHHHHHCCCBCHHHHTTCSSCCCTTTBCSCGGGBGGGCCCCCSCHHHH
T ss_pred EEeChHHCCHHHHHHHHHHcCCCCChhHhcCCCcCCcccCCCcCHHHhcccccccccccccc
Confidence 9999999999999999999999999999999999999999998765 3456788999973
No 7
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.88 E-value=2.1e-22 Score=154.42 Aligned_cols=103 Identities=19% Similarity=0.372 Sum_probs=89.2
Q ss_pred ceecC-cccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCCCe
Q 022560 185 LVTLN-RTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPT 263 (295)
Q Consensus 185 v~~lt-~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~Pt 263 (295)
|.+++ .++|++.+. ...+++|||+|||+||++|+.+.|.++++++.+.+ +.|++||++++ ++++ ++|+|+++||
T Consensus 2 V~~i~~~~~f~~~l~-~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~~--~~~~~vd~d~~-~~l~-~~~~V~~~PT 76 (105)
T 3zzx_A 2 VYQVKDQEDFTKQLN-EAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMSD--VVFLKVDVDEC-EDIA-QDNQIACMPT 76 (105)
T ss_dssp CEECCSHHHHHHHHH-HTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--EEEEEEETTTC-HHHH-HHTTCCBSSE
T ss_pred eEEeCCHHHHHHHHH-hcCCCEEEEEEECCCCCCccCCCcchhhhhhccCC--eEEEEEecccC-HHHH-HHcCCCeecE
Confidence 45564 478998875 23578999999999999999999999999999876 99999999999 9999 9999999999
Q ss_pred EEEEeCCCCCeeecCCCCCCHHHHHHHHHHhC
Q 022560 264 ILFFPKHSSKPIKYPSERRDVDSLMAFVDALR 295 (295)
Q Consensus 264 i~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l~ 295 (295)
+++|++|+. +..+.| .+.++|.++|++.+
T Consensus 77 ~~~~~~G~~-v~~~~G--~~~~~l~~~i~k~K 105 (105)
T 3zzx_A 77 FLFMKNGQK-LDSLSG--ANYDKLLELVEKNK 105 (105)
T ss_dssp EEEEETTEE-EEEEES--CCHHHHHHHHHHHC
T ss_pred EEEEECCEE-EEEEeC--cCHHHHHHHHHhcC
Confidence 999999874 445555 68999999999865
No 8
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.88 E-value=1.1e-21 Score=154.56 Aligned_cols=109 Identities=15% Similarity=0.359 Sum_probs=96.9
Q ss_pred CCCCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcC----CCeEEEEEEcCCCcHHHHHHhc
Q 022560 181 NSQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAG----NGVKVGKFRADGDQKEYAKQKL 256 (295)
Q Consensus 181 ~~~~v~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~----~~v~~~~vd~~~~~~~l~~~~~ 256 (295)
.++.|.+|++++|++++. +++++|||+|||+||++|+.+.|.|+++++.+.. ..+.|+.||++++ .+++ ++|
T Consensus 13 ~~~~v~~l~~~~f~~~~~--~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~-~~l~-~~~ 88 (127)
T 3h79_A 13 RPSRVVELTDETFDSIVM--DPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKY-PDVI-ERM 88 (127)
T ss_dssp CCCCCEECCTTTHHHHHT--CTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTC-HHHH-HHT
T ss_pred CCCceEECChhhHHHHHh--CCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEcccc-HhHH-Hhc
Confidence 456799999999999874 3589999999999999999999999999998752 3699999999999 9999 999
Q ss_pred CCCCCCeEEEEeCCCCC-eeecCCCCCCHHHHHHHHHHh
Q 022560 257 QLGSFPTILFFPKHSSK-PIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 257 ~V~~~Pti~~~~~g~~~-~~~~~gg~~~~e~l~~fi~~l 294 (295)
+|.++||+++|++|+.. ...|.| .++.++|.+||+++
T Consensus 89 ~v~~~Pt~~~~~~g~~~~~~~~~G-~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 89 RVSGFPTMRYYTRIDKQEPFEYSG-QRYLSLVDSFVFQN 126 (127)
T ss_dssp TCCSSSEEEEECSSCSSSCEECCS-CCCHHHHHHHHHHH
T ss_pred CCccCCEEEEEeCCCCCCceEecC-CccHHHHHHHHHhc
Confidence 99999999999988753 368888 79999999999875
No 9
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.84 E-value=6.3e-21 Score=154.89 Aligned_cols=106 Identities=11% Similarity=0.121 Sum_probs=90.0
Q ss_pred CceecCc-ccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCCC
Q 022560 184 NLVTLNR-TGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 262 (295)
Q Consensus 184 ~v~~lt~-~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~P 262 (295)
.|..++. ++|++.+. ..++++|||+|||+||+||+.+.|.|+++++++.+ .+.|++||+|++ ++++ .+|+|.++|
T Consensus 22 mv~~l~t~~~f~~~v~-~~~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~-~v~f~kVDVDe~-~e~a-~~y~V~siP 97 (160)
T 2av4_A 22 MLQHLNSGWAVDQAIV-NEDERLVCIRFGHDYDPDCMKMDELLYKVADDIKN-FCVIYLVDITEV-PDFN-TMYELYDPV 97 (160)
T ss_dssp CCEECCSHHHHHHHHH-HCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTT-TEEEEEEETTTC-CTTT-TTTTCCSSE
T ss_pred hhhccCCHHHHHHHHH-hcCCCEEEEEEECCCChhHHHHHHHHHHHHHHccC-CcEEEEEECCCC-HHHH-HHcCCCCCC
Confidence 3667754 88988763 13678999999999999999999999999999987 799999999999 9999 999999999
Q ss_pred eEEEEeCCCCCe-e-------ecCCCCCC-HHHHHHHHHHh
Q 022560 263 TILFFPKHSSKP-I-------KYPSERRD-VDSLMAFVDAL 294 (295)
Q Consensus 263 ti~~~~~g~~~~-~-------~~~gg~~~-~e~l~~fi~~l 294 (295)
|+++|++|+... . +..| ... .++|+++|+++
T Consensus 98 T~~fFk~G~~v~vd~Gtgd~~k~vG-a~~~k~~l~~~ie~~ 137 (160)
T 2av4_A 98 SVMFFYRNKHMMIDLGTGNNNKINW-PMNNKQEFIDIVETI 137 (160)
T ss_dssp EEEEEETTEEEEEECSSSCCSCBCS-CCCCHHHHHHHHHHH
T ss_pred EEEEEECCEEEEEecCCCCcCeEEe-ecCCHHHHHHHHHHH
Confidence 999999998421 2 5666 455 89999999864
No 10
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.84 E-value=6.1e-21 Score=152.30 Aligned_cols=105 Identities=10% Similarity=0.163 Sum_probs=91.5
Q ss_pred CCceecCcccHHHHHhhcCCCCcEEEEEECCCC--hhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCC
Q 022560 183 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWC--QFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGS 260 (295)
Q Consensus 183 ~~v~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC--~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~ 260 (295)
.....+|+++|++.+. +.+++|||+|||+|| ++|+.+.|.+++++++|.+ ++.|++||+|++ ++++ .+|+|++
T Consensus 15 ~g~~~vt~~~F~~~v~--~~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~-~v~~~KVdvDe~-~~la-~~ygV~s 89 (137)
T 2qsi_A 15 NAPTLVDEATVDDFIA--HSGKIVVLFFRGDAVRFPEAADLAVVLPELINAFPG-RLVAAEVAAEAE-RGLM-ARFGVAV 89 (137)
T ss_dssp --CEEECTTTHHHHHH--TSSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTT-TEEEEEECGGGH-HHHH-HHHTCCS
T ss_pred cCCcccCHhHHHHHHh--cCCCcEEEEEeCCccCCCchhhHHhHHHHHHHHccC-CcEEEEEECCCC-HHHH-HHcCCcc
Confidence 3456889999999885 244599999999999 9999999999999999988 799999999999 9999 9999999
Q ss_pred CCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 261 FPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 261 ~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
+||+++|++|+. +....| ..+.++|.++|+++
T Consensus 90 iPTlilFkdG~~-v~~~vG-~~~k~~l~~~l~~~ 121 (137)
T 2qsi_A 90 CPSLAVVQPERT-LGVIAK-IQDWSSYLAQIGAM 121 (137)
T ss_dssp SSEEEEEECCEE-EEEEES-CCCHHHHHHHHHHH
T ss_pred CCEEEEEECCEE-EEEEeC-CCCHHHHHHHHHHH
Confidence 999999999984 444555 78999999999864
No 11
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.84 E-value=3e-20 Score=142.02 Aligned_cols=105 Identities=19% Similarity=0.277 Sum_probs=94.5
Q ss_pred CCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCCC
Q 022560 183 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 262 (295)
Q Consensus 183 ~~v~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~P 262 (295)
..|..++.++|++.+. .++++++|+||++||++|+.+.|.++++++.+.+ ++.|+.||++++ +.++ ++|+|.++|
T Consensus 4 ~~v~~l~~~~~~~~~~--~~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~vd~~~~-~~l~-~~~~v~~~P 78 (111)
T 3gnj_A 4 MSLEKLDTNTFEQLIY--DEGKACLVMFSRKNCHVCQKVTPVLEELRLNYEE-SFGFYYVDVEEE-KTLF-QRFSLKGVP 78 (111)
T ss_dssp CCSEECCHHHHHHHHT--TSCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTTC-HHHH-HHTTCCSSC
T ss_pred CcceecCHHHHHHHHH--hcCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCC-ceEEEEEECCcC-hhHH-HhcCCCcCC
Confidence 5688999999999883 3689999999999999999999999999999987 799999999999 9999 999999999
Q ss_pred eEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 263 TILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 263 ti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
|+++|++|+. +..+.| ..+.++|.++|+++
T Consensus 79 t~~~~~~g~~-~~~~~g-~~~~~~l~~~l~~~ 108 (111)
T 3gnj_A 79 QILYFKDGEY-KGKMAG-DVEDDEVEQMIADV 108 (111)
T ss_dssp EEEEEETTEE-EEEEES-SCCHHHHHHHHHHH
T ss_pred EEEEEECCEE-EEEEec-cCCHHHHHHHHHHH
Confidence 9999988874 456666 78999999999875
No 12
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.84 E-value=2.3e-20 Score=149.25 Aligned_cols=110 Identities=24% Similarity=0.404 Sum_probs=94.5
Q ss_pred cCCCCceecCcccHHHHHhhcC---------CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHH
Q 022560 180 FNSQNLVTLNRTGMENLARLDH---------RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKE 250 (295)
Q Consensus 180 ~~~~~v~~lt~~~f~~~i~~~~---------~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~ 250 (295)
..++.|+.++.++|...+...+ +++++||+||++||++|+.+.|.|.++++.+.+ .+.|+.||++++ .+
T Consensus 19 ~~~~~v~~l~~~~f~~~l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~-~~ 96 (141)
T 3hxs_A 19 KPQSGTIHLTRAEFLKKIADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAG-KIYIYKVNVDKE-PE 96 (141)
T ss_dssp ----CCEECCHHHHHHHTCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTT-TCEEEEEETTTC-HH
T ss_pred CCCCCcccccHHHHHHHhhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcC-ceEEEEEECCCC-HH
Confidence 4557799999999999875322 478999999999999999999999999999987 799999999999 99
Q ss_pred HHHHhcCCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 251 YAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 251 l~~~~~~V~~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
++ ++|+|.++||+++|+.+++ +..+.| ..+.++|.++|+++
T Consensus 97 ~~-~~~~v~~~Pt~~~~~~~g~-~~~~~G-~~~~~~l~~~l~~~ 137 (141)
T 3hxs_A 97 LA-RDFGIQSIPTIWFVPMKGE-PQVNMG-ALSKEQLKGYIDKV 137 (141)
T ss_dssp HH-HHTTCCSSSEEEEECSSSC-CEEEES-CCCHHHHHHHHHHT
T ss_pred HH-HHcCCCCcCEEEEEeCCCC-EEEEeC-CCCHHHHHHHHHHH
Confidence 99 9999999999999966655 457777 78999999999875
No 13
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.84 E-value=5.1e-20 Score=145.10 Aligned_cols=108 Identities=27% Similarity=0.521 Sum_probs=96.8
Q ss_pred CCCCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCC
Q 022560 181 NSQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGS 260 (295)
Q Consensus 181 ~~~~v~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~ 260 (295)
..+.|..++.++|++.+. .+++++||+||++||++|+.+.|.|.++++.+++ .+.|+.||++++ .+++ ++|+|.+
T Consensus 15 ~~~~v~~l~~~~f~~~~~--~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~~-~~l~-~~~~v~~ 89 (130)
T 2dml_A 15 SSDDVIELTPSNFNREVI--QSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKD-VVKVGAVNADKH-QSLG-GQYGVQG 89 (130)
T ss_dssp TTSSSEECCTTTHHHHTT--TCSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTT-TSEEEEEETTTC-HHHH-HHHTCCS
T ss_pred CCCCcEECCHHHHHHHHh--cCCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcC-ceEEEEEeCCCC-HHHH-HHcCCCc
Confidence 456799999999998653 4688999999999999999999999999999987 699999999999 9999 9999999
Q ss_pred CCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 261 FPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 261 ~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
+||+++|++|+..+..+.| ..+.++|.+||.+.
T Consensus 90 ~Pt~~~~~~~~~~~~~~~G-~~~~~~l~~~l~~~ 122 (130)
T 2dml_A 90 FPTIKIFGANKNKPEDYQG-GRTGEAIVDAALSA 122 (130)
T ss_dssp SSEEEEESSCTTSCEECCS-CCSHHHHHHHHHHH
T ss_pred cCEEEEEeCCCCeEEEeec-CCCHHHHHHHHHHH
Confidence 9999999988865677887 78999999999763
No 14
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.83 E-value=4.3e-20 Score=147.41 Aligned_cols=105 Identities=26% Similarity=0.534 Sum_probs=95.5
Q ss_pred CCCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCC--CeEEEEEEcCCCcHHHHHHhcCCC
Q 022560 182 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGN--GVKVGKFRADGDQKEYAKQKLQLG 259 (295)
Q Consensus 182 ~~~v~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~--~v~~~~vd~~~~~~~l~~~~~~V~ 259 (295)
...|..++.++|++++. .++++||+||++||++|+.+.|.|.++++.+.+. .+.|+.||++++ .+++ ++|+|.
T Consensus 16 ~~~v~~l~~~~~~~~~~---~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~-~~~~-~~~~v~ 90 (140)
T 2dj1_A 16 ENGVWVLNDGNFDNFVA---DKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSA-SMLA-SKFDVS 90 (140)
T ss_dssp ETTEEECCTTTHHHHHT---TCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTC-HHHH-HHTTCC
T ss_pred CCCCEEcChHhHHHHHh---cCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCccc-HHHH-HHCCCC
Confidence 46789999999999875 6899999999999999999999999999999872 499999999999 9999 999999
Q ss_pred CCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 260 SFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 260 ~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
++||+++|++|+ +..+.| ..+.++|.+||+++
T Consensus 91 ~~Pt~~~~~~G~--~~~~~g-~~~~~~l~~~l~~~ 122 (140)
T 2dj1_A 91 GYPTIKILKKGQ--AVDYDG-SRTQEEIVAKVREV 122 (140)
T ss_dssp SSSEEEEEETTE--EEECCS-CCCHHHHHHHHHHH
T ss_pred ccCeEEEEECCc--EEEcCC-CCCHHHHHHHHHHh
Confidence 999999998877 777887 79999999999874
No 15
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.83 E-value=5.4e-20 Score=139.83 Aligned_cols=105 Identities=24% Similarity=0.397 Sum_probs=95.0
Q ss_pred CCCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCC
Q 022560 182 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSF 261 (295)
Q Consensus 182 ~~~v~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~ 261 (295)
++.|..+++++|++++. ++++++|+||++||++|+.+.|.+.++++.+++ .+.|+.||++++ ++++ ++|+|.++
T Consensus 3 ~~~v~~l~~~~~~~~~~---~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~-~~~~-~~~~i~~~ 76 (109)
T 3tco_A 3 EDVTLVLTEENFDEVIR---NNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKG-KAVFGRLNVDEN-QKIA-DKYSVLNI 76 (109)
T ss_dssp CCCCEECCTTTHHHHHH---HSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTTC-HHHH-HHTTCCSS
T ss_pred CCeEEEecHHHHHHHHh---cCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCC-CceEEEEccccC-HHHH-HhcCcccC
Confidence 35688999999999886 689999999999999999999999999999987 799999999999 9999 99999999
Q ss_pred CeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 262 PTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 262 Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
||+++|.+|+. ...+.| ..+.++|.++|+++
T Consensus 77 Pt~~~~~~g~~-~~~~~g-~~~~~~l~~~l~~~ 107 (109)
T 3tco_A 77 PTTLIFVNGQL-VDSLVG-AVDEDTLESTVNKY 107 (109)
T ss_dssp SEEEEEETTEE-EEEEES-CCCHHHHHHHHHHH
T ss_pred CEEEEEcCCcE-EEeeec-cCCHHHHHHHHHHH
Confidence 99999987764 555666 78999999999875
No 16
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.83 E-value=4.4e-21 Score=153.69 Aligned_cols=103 Identities=11% Similarity=0.072 Sum_probs=93.1
Q ss_pred CceecCcccHHHHHhhcCCCCcEEEEEECCC--ChhHHHHHHHHHHHHHHhcCCC-eEEEEEEcCCCcHHHHHHhcCCCC
Q 022560 184 NLVTLNRTGMENLARLDHRQEPWLVVLYAPW--CQFCQAMEGSYVELADKLAGNG-VKVGKFRADGDQKEYAKQKLQLGS 260 (295)
Q Consensus 184 ~v~~lt~~~f~~~i~~~~~~k~vvV~Fya~w--C~~C~~~~p~~~~la~~~~~~~-v~~~~vd~~~~~~~l~~~~~~V~~ 260 (295)
.+..+++++|++.+. ++++|||+|||+| |++|+.+.|.+++++++|.+ + +.|++||+|++ ++++ .+|+|++
T Consensus 18 g~~~~t~~~F~~~v~---~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g-~~v~~~KVdvDe~-~~lA-~~ygV~s 91 (140)
T 2qgv_A 18 GWTPVSESRLDDWLT---QAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPD-YTWQVAIADLEQS-EAIG-DRFGAFR 91 (140)
T ss_dssp TCEECCHHHHHHHHH---TCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTT-SCCEEEECCHHHH-HHHH-HHHTCCS
T ss_pred CCccCCHHHHHHHHh---CCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCC-CeEEEEEEECCCC-HHHH-HHcCCcc
Confidence 577899999999885 7889999999999 99999999999999999988 7 99999999999 9999 9999999
Q ss_pred CCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 261 FPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 261 ~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
+||+++|++|+. +....| ..+.++|.++|+++
T Consensus 92 IPTlilFk~G~~-v~~~~G-~~~k~~l~~~i~~~ 123 (140)
T 2qgv_A 92 FPATLVFTGGNY-RGVLNG-IHPWAELINLMRGL 123 (140)
T ss_dssp SSEEEEEETTEE-EEEEES-CCCHHHHHHHHHHH
T ss_pred CCEEEEEECCEE-EEEEec-CCCHHHHHHHHHHH
Confidence 999999999984 444555 78999999999864
No 17
>1sur_A PAPS reductase; assimilatory sulfate reduction, 3-phospho-adenylyl-sulfate reductase, oxidoreductase; 2.00A {Escherichia coli} SCOP: c.26.2.2
Probab=99.83 E-value=9e-21 Score=163.48 Aligned_cols=86 Identities=30% Similarity=0.659 Sum_probs=78.3
Q ss_pred hhhcchhchHHHHHHHhcCC--EEEEeeeccCCCcccCCCCceecCCccccccCCCCCEEEEeeCCCCCHHHHHHHHHHC
Q 022560 26 QECCRVRKVRPLRRALKGLR--AWITGQRKDQSPGTRSEIPVVQVDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTM 103 (295)
Q Consensus 26 ~~c~~~~K~~pl~~~l~~~~--~~~~G~R~~es~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~W~~~dvw~y~~~~ 103 (295)
..||.++|..||.+++++++ +|++|.|++|+ ..|+.++.++.. ++..+++||++|+.+|||+|++++
T Consensus 128 ~~~~~~~K~~~l~~~~~~~~~~~i~~G~r~dd~-~~r~~~~~~~~~----------~~~~~i~PLl~~t~~dI~~y~~~~ 196 (215)
T 1sur_A 128 EKYNDINKVEPMNRALKELNAQTWFAGLRREQS-GSRANLPVLAIQ----------RGVFKVLPIIDWDNRTIYQYLQKH 196 (215)
T ss_dssp HHHHHHHTHHHHHHHHHHTTEEEEECCCCTTSS-STTTTCCSEEEE----------TTEEEECTTTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCceEEEEeehhhh-hhhcCCCccccC----------CCEEEEechHhCCHHHHHHHHHHh
Confidence 45999999999999999987 69999999998 599999887533 257899999999999999999999
Q ss_pred CCCCCccccCCccccCCCC
Q 022560 104 DVPINSLHSQGYISIGCEP 122 (295)
Q Consensus 104 ~~p~~~ly~~g~~sigc~~ 122 (295)
+||+||||++||+||||+|
T Consensus 197 ~lp~~~lY~~Gy~siGC~p 215 (215)
T 1sur_A 197 GLKYHPLWDEGYLSVGDTH 215 (215)
T ss_dssp TCCCCGGGGGTCSCCCBCC
T ss_pred CCCCChHHhCCCCCCCCCC
Confidence 9999999999999999986
No 18
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.82 E-value=9.5e-20 Score=138.65 Aligned_cols=105 Identities=23% Similarity=0.394 Sum_probs=92.8
Q ss_pred CCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCCC
Q 022560 183 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 262 (295)
Q Consensus 183 ~~v~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~P 262 (295)
+.|+.++.++|++.+. .++++++|+||++||++|+.+.|.+.++++.+++ ++.|+.||++++ .+++ ++|+|.++|
T Consensus 2 ~~v~~l~~~~f~~~~~--~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~-~~~~-~~~~v~~~P 76 (108)
T 2trx_A 2 DKIIHLTDDSFDTDVL--KADGAILVDFWAEWCGPCKMIAPILDEIADEYQG-KLTVAKLNIDQN-PGTA-PKYGIRGIP 76 (108)
T ss_dssp TTEEECCTTTHHHHTT--TCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETTTC-TTHH-HHTTCCSSS
T ss_pred CcceecchhhHHHHHH--hcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCC-CcEEEEEECCCC-HHHH-HHcCCcccC
Confidence 5688999999997652 4789999999999999999999999999999987 699999999998 8999 999999999
Q ss_pred eEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 263 TILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 263 ti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
|+++|++|+. ...+.| ..+.++|.++|+++
T Consensus 77 t~~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 106 (108)
T 2trx_A 77 TLLLFKNGEV-AATKVG-ALSKGQLKEFLDAN 106 (108)
T ss_dssp EEEEEETTEE-EEEEES-CCCHHHHHHHHHHH
T ss_pred EEEEEeCCEE-EEEEec-CCCHHHHHHHHHHh
Confidence 9999987763 445666 78999999999875
No 19
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.82 E-value=9.7e-20 Score=137.84 Aligned_cols=103 Identities=20% Similarity=0.290 Sum_probs=93.5
Q ss_pred CCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCCC
Q 022560 183 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 262 (295)
Q Consensus 183 ~~v~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~P 262 (295)
..+.+++.++|++.+ ++++++|+||++||++|+.+.|.+.++++.+++ ++.|+.||++++ .+++ ++|+|.++|
T Consensus 3 ~~v~~l~~~~~~~~~----~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~-~~~~-~~~~v~~~P 75 (106)
T 3die_A 3 MAIVKVTDADFDSKV----ESGVQLVDFWATACGPCKMIAPVLEELAADYEG-KADILKLDVDEN-PSTA-AKYEVMSIP 75 (106)
T ss_dssp CCCEECCTTTHHHHS----CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTC-HHHH-HHTTCCSBS
T ss_pred cceEECCHHHHHHHh----cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcC-CcEEEEEECCcC-HHHH-HhCCCcccC
Confidence 468899999999977 689999999999999999999999999999987 699999999999 9999 999999999
Q ss_pred eEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 263 TILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 263 ti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
|+++|++|+. ...+.| ..+.++|.++|+++
T Consensus 76 t~~~~~~G~~-~~~~~g-~~~~~~l~~~l~~~ 105 (106)
T 3die_A 76 TLIVFKDGQP-VDKVVG-FQPKENLAEVLDKH 105 (106)
T ss_dssp EEEEEETTEE-EEEEES-CCCHHHHHHHHHTT
T ss_pred EEEEEeCCeE-EEEEeC-CCCHHHHHHHHHHh
Confidence 9999997764 556666 78999999999875
No 20
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=99.82 E-value=1.1e-19 Score=151.70 Aligned_cols=109 Identities=16% Similarity=0.272 Sum_probs=93.0
Q ss_pred CCCCceecCcccHHHHHhhcCCCCcEEEEEEC-------CCChhHHHHHHHHHHHHHHhc-----CCCeEEEEEEcCCCc
Q 022560 181 NSQNLVTLNRTGMENLARLDHRQEPWLVVLYA-------PWCQFCQAMEGSYVELADKLA-----GNGVKVGKFRADGDQ 248 (295)
Q Consensus 181 ~~~~v~~lt~~~f~~~i~~~~~~k~vvV~Fya-------~wC~~C~~~~p~~~~la~~~~-----~~~v~~~~vd~~~~~ 248 (295)
.++.|++||+++|++++. ..++.+|||+||| +||++|+.+.|+|+++++.+. + ++.|++||++++
T Consensus 16 ~~~~vi~lt~~nF~~~v~-~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~-~v~f~kvD~d~~- 92 (178)
T 3ga4_A 16 DDTGVITVTADNYPLLSR-GVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQS-LNLFFTVDVNEV- 92 (178)
T ss_dssp CTTSEEECCTTTHHHHTT-CCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTC-CEEEEEEETTTC-
T ss_pred ccCCCEECCHHHHHHHHc-ccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCC-CEEEEEEECccC-
Confidence 346799999999999874 2346789999999 499999999999999999997 5 799999999999
Q ss_pred HHHHHHhcCCCCCCeEEEEeCCCCCe-----------eec--C-CCCCCHHHHHHHHHH
Q 022560 249 KEYAKQKLQLGSFPTILFFPKHSSKP-----------IKY--P-SERRDVDSLMAFVDA 293 (295)
Q Consensus 249 ~~l~~~~~~V~~~Pti~~~~~g~~~~-----------~~~--~-gg~~~~e~l~~fi~~ 293 (295)
++++ ++|+|+++||+++|++|+... ..| . ++.++++.|.+||.+
T Consensus 93 ~~la-~~~~I~siPtl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae~la~fi~~ 150 (178)
T 3ga4_A 93 PQLV-KDLKLQNVPHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTLQFGDFLAK 150 (178)
T ss_dssp HHHH-HHTTCCSSCEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHHHHHHHHHH
T ss_pred HHHH-HHcCCCCCCEEEEEcCCCCCCccccccccCCcceeecccCCCcCHHHHHHHHHH
Confidence 9999 999999999999999987533 334 1 225899999999976
No 21
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.82 E-value=1.1e-19 Score=143.38 Aligned_cols=106 Identities=25% Similarity=0.561 Sum_probs=94.3
Q ss_pred CCCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhc----CCCeEEEEEEcCCCcHHHHHHhcC
Q 022560 182 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLA----GNGVKVGKFRADGDQKEYAKQKLQ 257 (295)
Q Consensus 182 ~~~v~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~----~~~v~~~~vd~~~~~~~l~~~~~~ 257 (295)
...|..++.++|++.+. .+++++||+||++||++|+.+.|.|.++++.++ + ++.|+.||++.+ ..++ ++|+
T Consensus 6 ~~~v~~l~~~~~~~~~~--~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~~-~~l~-~~~~ 80 (133)
T 1x5d_A 6 SGDVIELTDDSFDKNVL--DSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKG-KVKLAAVDATVN-QVLA-SRYG 80 (133)
T ss_dssp CCSCEECCTTHHHHHTT--TSSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTT-SEEEEEEETTTC-CHHH-HHHT
T ss_pred CCcCEEcCHhhHHHHHh--cCCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCC-cEEEEEEECCCC-HHHH-HhCC
Confidence 35689999999998763 367899999999999999999999999999997 4 699999999998 8999 9999
Q ss_pred CCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 258 LGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 258 V~~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
|.++||+++|++|+ .+..+.| ..+.++|.+||+++
T Consensus 81 v~~~Pt~~~~~~g~-~~~~~~G-~~~~~~l~~~l~~~ 115 (133)
T 1x5d_A 81 IRGFPTIKIFQKGE-SPVDYDG-GRTRSDIVSRALDL 115 (133)
T ss_dssp CCSSSEEEEEETTE-EEEEECS-CCSHHHHHHHHHHH
T ss_pred CCeeCeEEEEeCCC-ceEEecC-CCCHHHHHHHHHHH
Confidence 99999999999976 3667777 78999999999864
No 22
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.82 E-value=1.8e-19 Score=136.64 Aligned_cols=106 Identities=21% Similarity=0.345 Sum_probs=93.8
Q ss_pred CCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCCC
Q 022560 183 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 262 (295)
Q Consensus 183 ~~v~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~P 262 (295)
+.|+++++++|++.+. .++++++|+||++||++|+.+.|.+.++++.+.+ ++.|+.||++++ ..++ ++|+|.++|
T Consensus 2 ~~v~~l~~~~~~~~~~--~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~-~~~~-~~~~v~~~P 76 (107)
T 2i4a_A 2 EHTLAVSDSSFDQDVL--KASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAG-KVTVAKVNIDDN-PETP-NAYQVRSIP 76 (107)
T ss_dssp CCEEECCTTTHHHHTT--TCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTT-SEEEEEEETTTC-CHHH-HHTTCCSSS
T ss_pred CceeecchhhhhHHHH--hCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCC-cEEEEEEECCCC-HHHH-HhcCCCccC
Confidence 4688999999987652 4789999999999999999999999999999987 799999999998 8999 999999999
Q ss_pred eEEEEeCCCCCeeecCCCCCCHHHHHHHHHHhC
Q 022560 263 TILFFPKHSSKPIKYPSERRDVDSLMAFVDALR 295 (295)
Q Consensus 263 ti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l~ 295 (295)
|+++|++|+. ...+.| ..+.++|.++|+++.
T Consensus 77 t~~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~l 107 (107)
T 2i4a_A 77 TLMLVRDGKV-IDKKVG-ALPKSQLKAWVESAQ 107 (107)
T ss_dssp EEEEEETTEE-EEEEES-CCCHHHHHHHHHHTC
T ss_pred EEEEEeCCEE-EEEecC-CCCHHHHHHHHHhcC
Confidence 9999987763 445666 789999999998863
No 23
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.82 E-value=1.7e-19 Score=141.60 Aligned_cols=103 Identities=19% Similarity=0.443 Sum_probs=91.8
Q ss_pred CCCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCC
Q 022560 182 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSF 261 (295)
Q Consensus 182 ~~~v~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~ 261 (295)
.+.|+.+++++|++++. + .+||+|||+||++|+.+.|.|.++++.+++.++.|+.||++++ ..++ ++|+|.++
T Consensus 6 ~~~v~~l~~~~f~~~~~----~-~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~~-~~~~-~~~~v~~~ 78 (126)
T 1x5e_A 6 SGNVRVITDENWRELLE----G-DWMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQ-PGLS-GRFIINAL 78 (126)
T ss_dssp CCSEEECCTTTHHHHTS----S-EEEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTTC-HHHH-HHTTCCSS
T ss_pred CCccEEecHHHHHHHhC----C-CEEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcCC-HHHH-HHcCCccc
Confidence 35689999999998763 2 3999999999999999999999999998754699999999999 8999 99999999
Q ss_pred CeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 262 PTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 262 Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
||+++|++|+ +..+.| ..+.++|.+||+++
T Consensus 79 Pt~~~~~~G~--~~~~~G-~~~~~~l~~~l~~~ 108 (126)
T 1x5e_A 79 PTIYHCKDGE--FRRYQG-PRTKKDFINFISDK 108 (126)
T ss_dssp SEEEEEETTE--EEECCS-CCCHHHHHHHHHTC
T ss_pred CEEEEEeCCe--EEEeec-CCCHHHHHHHHHHH
Confidence 9999998876 677887 78999999999864
No 24
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.82 E-value=1.1e-19 Score=137.65 Aligned_cols=102 Identities=24% Similarity=0.393 Sum_probs=90.9
Q ss_pred ceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCCCeE
Q 022560 185 LVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTI 264 (295)
Q Consensus 185 v~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~Pti 264 (295)
|+++++++|++++. ++++++|+||++||++|+.+.|.++++++.+.+ .+.|+.||++++ .+++ ++|+|.++||+
T Consensus 2 v~~l~~~~~~~~~~---~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~-~v~~~~v~~~~~-~~~~-~~~~v~~~Pt~ 75 (105)
T 1nsw_A 2 TMTLTDANFQQAIQ---GDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHAD-KVTVAKLNVDEN-PETT-SQFGIMSIPTL 75 (105)
T ss_dssp CEEECTTTHHHHHS---SSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT-TCEEEEEETTTC-HHHH-HHTTCCSSSEE
T ss_pred ceeccHHhHHHHHh---CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CcEEEEEECcCC-HHHH-HHcCCccccEE
Confidence 67899999997665 789999999999999999999999999999987 699999999999 8999 99999999999
Q ss_pred EEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 265 LFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 265 ~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
++|++|+. ...+.| ..+.++|.++|+++
T Consensus 76 ~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 103 (105)
T 1nsw_A 76 ILFKGGRP-VKQLIG-YQPKEQLEAQLADV 103 (105)
T ss_dssp EEEETTEE-EEEEES-CCCHHHHHHHTTTT
T ss_pred EEEeCCeE-EEEEec-CCCHHHHHHHHHHH
Confidence 99987763 445666 78999999998765
No 25
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.82 E-value=2.1e-19 Score=145.16 Aligned_cols=105 Identities=17% Similarity=0.401 Sum_probs=95.1
Q ss_pred CCCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCC
Q 022560 182 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSF 261 (295)
Q Consensus 182 ~~~v~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~ 261 (295)
...++.++.++|++++. .++++||+||++||++|+.+.|.|+++++.+.+ ++.|+.||++++ .+++ ++|+|.++
T Consensus 37 ~~~v~~l~~~~~~~~~~---~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~-~~~~~~vd~~~~-~~l~-~~~~v~~~ 110 (148)
T 3p2a_A 37 DGEVINATAETLDKLLQ---DDLPMVIDFWAPWCGPCRSFAPIFAETAAERAG-KVRFVKVNTEAE-PALS-TRFRIRSI 110 (148)
T ss_dssp CCCCEECCTTTHHHHTT---CSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTC-HHHH-HHTTCCSS
T ss_pred cCCceecCHHHHHHHHh---cCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCC-ceEEEEEECcCC-HHHH-HHCCCCcc
Confidence 45789999999999874 889999999999999999999999999999987 699999999999 9999 99999999
Q ss_pred CeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 262 PTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 262 Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
||+++|++|+. +..+.| ..+.++|.+||+++
T Consensus 111 Pt~~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 141 (148)
T 3p2a_A 111 PTIMLYRNGKM-IDMLNG-AVPKAPFDNWLDEQ 141 (148)
T ss_dssp SEEEEEETTEE-EEEESS-CCCHHHHHHHHHHH
T ss_pred CEEEEEECCeE-EEEEeC-CCCHHHHHHHHHHH
Confidence 99999988764 556776 79999999999874
No 26
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.82 E-value=1.8e-19 Score=137.48 Aligned_cols=105 Identities=24% Similarity=0.509 Sum_probs=93.5
Q ss_pred CCCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcC--CCeEEEEEEcCCCcHHHHHHhcCCC
Q 022560 182 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAG--NGVKVGKFRADGDQKEYAKQKLQLG 259 (295)
Q Consensus 182 ~~~v~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~--~~v~~~~vd~~~~~~~l~~~~~~V~ 259 (295)
++.|+.+++++|++.+. +++++|+||++||++|+.+.|.+.++++.+.. ..+.|+.||++++ .+++ ++|+|.
T Consensus 4 ~~~v~~l~~~~~~~~~~----~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~-~~l~-~~~~v~ 77 (111)
T 3uvt_A 4 GSTVLALTENNFDDTIA----EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAE-RNIC-SKYSVR 77 (111)
T ss_dssp -CCSEECCTTTHHHHHH----SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTC-HHHH-HHTTCC
T ss_pred CCcceEcChhhHHHHhc----CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEecccc-HhHH-HhcCCC
Confidence 35789999999999885 78999999999999999999999999998764 2699999999999 9999 999999
Q ss_pred CCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 260 SFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 260 ~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
++||+++|++|+. +..+.| ..+.++|.+||++.
T Consensus 78 ~~Pt~~~~~~g~~-~~~~~g-~~~~~~l~~~l~~~ 110 (111)
T 3uvt_A 78 GYPTLLLFRGGKK-VSEHSG-GRDLDSLHRFVLSQ 110 (111)
T ss_dssp SSSEEEEEETTEE-EEEECS-CCSHHHHHHHHHHH
T ss_pred cccEEEEEeCCcE-EEeccC-CcCHHHHHHHHHhc
Confidence 9999999988874 566777 78999999999874
No 27
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.81 E-value=1.7e-19 Score=142.26 Aligned_cols=112 Identities=16% Similarity=0.211 Sum_probs=93.5
Q ss_pred CcccccccCCCCceecCc-ccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHH
Q 022560 173 SEAVADIFNSQNLVTLNR-TGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEY 251 (295)
Q Consensus 173 ~~~~~~~~~~~~v~~lt~-~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l 251 (295)
+++.........|.++++ ++|++++. +++++||+|||+||++|+.+.|.|.++++.+++ +.|+.||++++ .++
T Consensus 9 ~~~~~~~~~~~mv~~l~~~~~f~~~~~---~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~--v~~~~vd~d~~-~~l 82 (125)
T 1r26_A 9 HHGIRMRARYPSVVDVYSVEQFRNIMS---EDILTVAWFTAVWCGPCKTIERPMEKIAYEFPT--VKFAKVDADNN-SEI 82 (125)
T ss_dssp ---CCCSSCCSCCEEECCHHHHHHHHH---SSSCEEEEEECTTCHHHHHTHHHHHHHHHHCTT--SEEEEEETTTC-HHH
T ss_pred ccceeeeccccceEECCCHHHHHHHHc---cCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCC--CEEEEEECCCC-HHH
Confidence 333333334455889998 99999885 789999999999999999999999999999854 99999999999 999
Q ss_pred HHHhcCCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 252 AKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 252 ~~~~~~V~~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
+ ++|+|.++||+++|++|+. +..+.| .+.++|.++|+++
T Consensus 83 ~-~~~~v~~~Pt~~i~~~G~~-~~~~~G--~~~~~l~~~l~~~ 121 (125)
T 1r26_A 83 V-SKCRVLQLPTFIIARSGKM-LGHVIG--ANPGMLRQKLRDI 121 (125)
T ss_dssp H-HHTTCCSSSEEEEEETTEE-EEEEES--SCHHHHHHHHHHH
T ss_pred H-HHcCCCcccEEEEEeCCeE-EEEEeC--CCHHHHHHHHHHH
Confidence 9 9999999999999988863 445555 5889999999875
No 28
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.81 E-value=9.6e-20 Score=141.44 Aligned_cols=103 Identities=18% Similarity=0.281 Sum_probs=90.4
Q ss_pred CceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCCCe
Q 022560 184 NLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPT 263 (295)
Q Consensus 184 ~v~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~Pt 263 (295)
.+...+.++|++++.. .+++++||+|||+||++|+.+.|.|+++++.+++ +.|+.||++++ .+++ ++|+|.++||
T Consensus 13 ~~~~~t~~~f~~~l~~-~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~--v~~~~vd~d~~-~~l~-~~~~v~~~Pt 87 (116)
T 3qfa_C 13 VKQIESKTAFQEALDA-AGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN--VIFLEVDVDDC-QDVA-SECEVKSMPT 87 (116)
T ss_dssp CBCCCCHHHHHHHHHH-HTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT--SEEEEEETTTT-HHHH-HHTTCCSSSE
T ss_pred ccCCCCHHHHHHHHHh-cCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--CEEEEEECCCC-HHHH-HHcCCccccE
Confidence 4555788999998752 2689999999999999999999999999999877 99999999999 9999 9999999999
Q ss_pred EEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 264 ILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 264 i~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
+++|++|+. +..+.| . +.++|.++|+++
T Consensus 88 ~~~~~~G~~-~~~~~G-~-~~~~l~~~l~~~ 115 (116)
T 3qfa_C 88 FQFFKKGQK-VGEFSG-A-NKEKLEATINEL 115 (116)
T ss_dssp EEEESSSSE-EEEEES-C-CHHHHHHHHHHH
T ss_pred EEEEeCCeE-EEEEcC-C-CHHHHHHHHHHh
Confidence 999987763 555666 5 999999999876
No 29
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.81 E-value=2.2e-19 Score=136.29 Aligned_cols=103 Identities=17% Similarity=0.326 Sum_probs=92.5
Q ss_pred CceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCCCe
Q 022560 184 NLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPT 263 (295)
Q Consensus 184 ~v~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~Pt 263 (295)
.|+++++++|++++. ++++++|+||++||++|+.+.|.+.++++.+.+ ++.|+.||++++ .+++ ++|+|.++||
T Consensus 2 ~v~~l~~~~~~~~~~---~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~-~~~~-~~~~v~~~Pt 75 (109)
T 2yzu_A 2 KPIEVTDQNFDETLG---QHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEG-KLLVAKLDVDEN-PKTA-MRYRVMSIPT 75 (109)
T ss_dssp CCEECCTTTHHHHHH---HCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBT-TBEEEEEETTTC-HHHH-HHTTCCSSSE
T ss_pred cceEccHhHHHHHhc---CCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhC-ceEEEEEECCCC-HhHH-HhCCCCcCCE
Confidence 578899999998775 689999999999999999999999999999987 699999999999 8999 9999999999
Q ss_pred EEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 264 ILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 264 i~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
+++|++|+. ...+.| ..+.++|.++|+++
T Consensus 76 ~~~~~~g~~-~~~~~g-~~~~~~l~~~l~~~ 104 (109)
T 2yzu_A 76 VILFKDGQP-VEVLVG-AQPKRNYQAKIEKH 104 (109)
T ss_dssp EEEEETTEE-EEEEES-CCCHHHHHHHHHTT
T ss_pred EEEEeCCcE-eeeEeC-CCCHHHHHHHHHHH
Confidence 999987763 445666 68999999999875
No 30
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.81 E-value=1.2e-19 Score=145.61 Aligned_cols=106 Identities=19% Similarity=0.332 Sum_probs=94.1
Q ss_pred CCCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCC
Q 022560 182 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSF 261 (295)
Q Consensus 182 ~~~v~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~ 261 (295)
...|..+++++|.+.+. .+++++||+||++||++|+.+.|.|.++++.+.+ ++.|+.||++++ .+++ ++|+|.++
T Consensus 5 ~~~v~~l~~~~f~~~~~--~~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~~-~~l~-~~~~v~~~ 79 (140)
T 3hz4_A 5 GSSIIEFEDMTWSQQVE--DSKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGS-SAVFGRINIATN-PWTA-EKYGVQGT 79 (140)
T ss_dssp TTTEEEECHHHHHHHTT--TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TSEEEEEETTTC-HHHH-HHHTCCEE
T ss_pred CcceEEcchHhHHHHHH--hCCCcEEEEEECCCChhHHHHHHHHHHHHHHhCC-ceEEEEEECCcC-HhHH-HHCCCCcC
Confidence 46789999999995442 3689999999999999999999999999999988 799999999999 9999 99999999
Q ss_pred CeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 262 PTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 262 Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
||+++|++|+. +..+.| ..+.++|.++|+++
T Consensus 80 Pt~~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 110 (140)
T 3hz4_A 80 PTFKFFCHGRP-VWEQVG-QIYPSILKNAVRDM 110 (140)
T ss_dssp SEEEEEETTEE-EEEEES-SCCHHHHHHHHHHH
T ss_pred CEEEEEeCCcE-EEEEcC-CCCHHHHHHHHHHH
Confidence 99999988874 556766 78999999999864
No 31
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.81 E-value=1.9e-19 Score=147.35 Aligned_cols=105 Identities=23% Similarity=0.464 Sum_probs=93.8
Q ss_pred CCCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCC
Q 022560 182 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSF 261 (295)
Q Consensus 182 ~~~v~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~ 261 (295)
+..+++++.++|++++. +++++||+||++||++|+.+.|.|+++++.+.+ ++.|++||++++ ++++ ++|+|.++
T Consensus 46 ~~~~~~l~~~~f~~~~~---~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~-~v~~~~vd~~~~-~~l~-~~~~i~~~ 119 (155)
T 2ppt_A 46 TGKVAGIDPAILARAER---DDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAG-QVRLAKIDTQAH-PAVA-GRHRIQGI 119 (155)
T ss_dssp CSSEEECCHHHHHHHTT---CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTTS-THHH-HHTTCCSS
T ss_pred CCCCccCCHHHHHHHHh---CCCcEEEEEECCCCHHHHHHHHHHHHHHHHccC-CEEEEEEeCCcc-HHHH-HHcCCCcC
Confidence 34678899999999773 789999999999999999999999999999987 699999999999 8999 99999999
Q ss_pred CeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 262 PTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 262 Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
||+++|++|+. +..+.| ..+.++|.+||+++
T Consensus 120 Pt~~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 150 (155)
T 2ppt_A 120 PAFILFHKGRE-LARAAG-ARPASELVGFVRGK 150 (155)
T ss_dssp SEEEEEETTEE-EEEEES-CCCHHHHHHHHHHH
T ss_pred CEEEEEeCCeE-EEEecC-CCCHHHHHHHHHHH
Confidence 99999988764 455666 78999999999874
No 32
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.81 E-value=2.8e-19 Score=137.02 Aligned_cols=106 Identities=17% Similarity=0.309 Sum_probs=92.9
Q ss_pred CCCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCC
Q 022560 182 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSF 261 (295)
Q Consensus 182 ~~~v~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~ 261 (295)
+..|..+++++|.+.+. +++++++|+||++||++|+.+.|.+.++++.+++ ++.|+.||++++ .+++ ++|+|.++
T Consensus 4 ~~~v~~l~~~~~~~~~~--~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~-~~~~-~~~~v~~~ 78 (112)
T 1t00_A 4 AGTLKHVTDDSFEQDVL--KNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGD-KIEIVKLNIDEN-PGTA-AKYGVMSI 78 (112)
T ss_dssp SCCCEEECTTTHHHHTT--TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTC-HHHH-HHTTCCSS
T ss_pred cceEEecchhhHHHHHh--hCCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcC-CeEEEEEEcCCC-HHHH-HhCCCCcc
Confidence 35688999999987553 4689999999999999999999999999999977 699999999999 9999 99999999
Q ss_pred CeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 262 PTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 262 Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
||+++|++|+. ...+.| ..+.++|.++|+++
T Consensus 79 Pt~~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 109 (112)
T 1t00_A 79 PTLNVYQGGEV-AKTIVG-AKPKAAIVRDLEDF 109 (112)
T ss_dssp SEEEEEETTEE-EEEEES-CCCHHHHHHHTHHH
T ss_pred cEEEEEeCCEE-EEEEeC-CCCHHHHHHHHHHH
Confidence 99999988763 455666 78899999999875
No 33
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.81 E-value=1.2e-19 Score=139.65 Aligned_cols=102 Identities=20% Similarity=0.300 Sum_probs=91.8
Q ss_pred CceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCCCe
Q 022560 184 NLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPT 263 (295)
Q Consensus 184 ~v~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~Pt 263 (295)
.|++++.++|++.+ ++++++|+||++||++|+.+.|.+.++++.+++ ++.|+.||++++ .+++ ++|+|.++||
T Consensus 2 ~v~~l~~~~~~~~~----~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~-~v~~~~vd~~~~-~~l~-~~~~v~~~Pt 74 (112)
T 2voc_A 2 AIVKATDQSFSAET----SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGD-KLKIVKIDVDEN-QETA-GKYGVMSIPT 74 (112)
T ss_dssp CCEECCTTTHHHHH----SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTT-TCEEEEEETTTC-CSHH-HHTTCCSBSE
T ss_pred CeEEecHHHHHHHh----CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC-CcEEEEEECCCC-HHHH-HHcCCCcccE
Confidence 47889999999977 689999999999999999999999999999987 799999999998 8999 9999999999
Q ss_pred EEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 264 ILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 264 i~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
+++|++|+. +..+.| ..+.++|.+||+++
T Consensus 75 ~~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 103 (112)
T 2voc_A 75 LLVLKDGEV-VETSVG-FKPKEALQELVNKH 103 (112)
T ss_dssp EEEEETTEE-EEEEES-CCCHHHHHHHHHTT
T ss_pred EEEEeCCEE-EEEEeC-CCCHHHHHHHHHHH
Confidence 999987763 555666 79999999999865
No 34
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.81 E-value=2.8e-19 Score=137.14 Aligned_cols=100 Identities=17% Similarity=0.289 Sum_probs=88.2
Q ss_pred ceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCCCeE
Q 022560 185 LVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTI 264 (295)
Q Consensus 185 v~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~Pti 264 (295)
....+.++|++++. +++++||+||++||++|+.+.|.++++++.+++ +.|+.||++++ .+++ ++|+|.++||+
T Consensus 9 ~~~~~~~~f~~~~~---~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~--~~~~~vd~~~~-~~l~-~~~~v~~~Pt~ 81 (109)
T 3f3q_A 9 TQFKTASEFDSAIA---QDKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQ--ADFYKLDVDEL-GDVA-QKNEVSAMPTL 81 (109)
T ss_dssp EECCSHHHHHHHTT---SSSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTTC-HHHH-HHTTCCSSSEE
T ss_pred cCCCCHHHHHHHHh---cCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCC--CEEEEEECCCC-HHHH-HHcCCCccCEE
Confidence 34467789998876 799999999999999999999999999999976 99999999999 9999 99999999999
Q ss_pred EEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 265 LFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 265 ~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
++|++|+. +..+.| . +.++|.++|+++
T Consensus 82 ~~~~~G~~-~~~~~G-~-~~~~l~~~i~~~ 108 (109)
T 3f3q_A 82 LLFKNGKE-VAKVVG-A-NPAAIKQAIAAN 108 (109)
T ss_dssp EEEETTEE-EEEEES-S-CHHHHHHHHHHH
T ss_pred EEEECCEE-EEEEeC-C-CHHHHHHHHHhh
Confidence 99997763 555666 4 789999999886
No 35
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.81 E-value=3e-19 Score=142.42 Aligned_cols=107 Identities=21% Similarity=0.359 Sum_probs=93.2
Q ss_pred CCCceecCcccHHHHHhhc---------CCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHH
Q 022560 182 SQNLVTLNRTGMENLARLD---------HRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYA 252 (295)
Q Consensus 182 ~~~v~~lt~~~f~~~i~~~---------~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~ 252 (295)
+..|+.+++++|.+.+... ..++++||+||++||++|+.+.|.|.++++.+++ ++.|+.||++++ .+++
T Consensus 8 ~~~v~~l~~~~f~~~v~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~~-~~l~ 85 (136)
T 2l5l_A 8 NGKVIHLTKAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYADWCGPCKMVAPILDELAKEYDG-QIVIYKVDTEKE-QELA 85 (136)
T ss_dssp TTSEEEECHHHHHHHTBCTTTCSSSCCBCCSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTC-HHHH
T ss_pred CCceEEecchHHHHHHHhhccCccceeecCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcC-CEEEEEEeCCCC-HHHH
Confidence 3568899999999877521 1568999999999999999999999999999987 699999999999 8999
Q ss_pred HHhcCCCCCCeEEEE-eCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 253 KQKLQLGSFPTILFF-PKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 253 ~~~~~V~~~Pti~~~-~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
++|+|.++||+++| ++|+ ++.+.| ..+.++|.++|+++
T Consensus 86 -~~~~v~~~Pt~~~~~~~G~--~~~~~G-~~~~~~l~~~l~~~ 124 (136)
T 2l5l_A 86 -GAFGIRSIPSILFIPMEGK--PEMAQG-AMPKASFKKAIDEF 124 (136)
T ss_dssp -HHTTCCSSCEEEEECSSSC--CEEEES-CCCHHHHHHHHHHH
T ss_pred -HHcCCCCCCEEEEECCCCc--EEEEeC-CCCHHHHHHHHHHH
Confidence 99999999999999 5665 446777 68999999999874
No 36
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.81 E-value=3.3e-19 Score=135.43 Aligned_cols=104 Identities=21% Similarity=0.338 Sum_probs=92.1
Q ss_pred CceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCCCe
Q 022560 184 NLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPT 263 (295)
Q Consensus 184 ~v~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~Pt 263 (295)
.|..+++++|++.+. +++++++|+||++||++|+.+.|.+.++++.+++ ++.|+.||++++ ++++ ++|+|.++||
T Consensus 2 ~v~~l~~~~~~~~~~--~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~-~~~~-~~~~v~~~Pt 76 (107)
T 1dby_A 2 EAGAVNDDTFKNVVL--ESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKD-KLKCVKLNTDES-PNVA-SEYGIRSIPT 76 (107)
T ss_dssp CCEEECHHHHHHHTT--TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTC-HHHH-HHHTCCSSCE
T ss_pred ccEeccHHHHHHHHh--cCCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCC-ceEEEEEECCCC-HHHH-HHCCCCcCCE
Confidence 478899999998663 4689999999999999999999999999999987 699999999999 8999 9999999999
Q ss_pred EEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 264 ILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 264 i~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
+++|++|+. ...+.| ..+.++|.++|+++
T Consensus 77 ~~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 105 (107)
T 1dby_A 77 IMVFKGGKK-CETIIG-AVPKATIVQTVEKY 105 (107)
T ss_dssp EEEESSSSE-EEEEES-CCCHHHHHHHHHHH
T ss_pred EEEEeCCEE-EEEEeC-CCCHHHHHHHHHHH
Confidence 999987763 455666 78999999999876
No 37
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.81 E-value=2.6e-19 Score=139.46 Aligned_cols=106 Identities=22% Similarity=0.375 Sum_probs=93.4
Q ss_pred CCCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCC
Q 022560 182 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSF 261 (295)
Q Consensus 182 ~~~v~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~ 261 (295)
++.+..+++++|++.+. ++++++||+||++||++|+.+.|.|.++++.+.+ ++.|+.||++++ .+++ ++|+|.++
T Consensus 12 ~~~~~~~~~~~f~~~v~--~~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~-~v~~~~vd~d~~-~~l~-~~~~v~~~ 86 (119)
T 1w4v_A 12 STTFNIQDGPDFQDRVV--NSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHG-KVVMAKVDIDDH-TDLA-IEYEVSAV 86 (119)
T ss_dssp CSEEECCSHHHHHHHTT--TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-SSEEEEEETTTT-HHHH-HHTTCCSS
T ss_pred ceEEEecChhhHHHHHH--cCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEeCCCC-HHHH-HHcCCCcc
Confidence 45688899999998653 4688999999999999999999999999999977 699999999999 8999 99999999
Q ss_pred CeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 262 PTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 262 Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
||+++|++|+. +..+.| ..+.++|.++|+++
T Consensus 87 Pt~~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 117 (119)
T 1w4v_A 87 PTVLAMKNGDV-VDKFVG-IKDEDQLEAFLKKL 117 (119)
T ss_dssp SEEEEEETTEE-EEEEES-CCCHHHHHHHHHHH
T ss_pred cEEEEEeCCcE-EEEEcC-CCCHHHHHHHHHHH
Confidence 99999987763 445666 68999999999875
No 38
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.81 E-value=4.2e-19 Score=136.07 Aligned_cols=105 Identities=19% Similarity=0.346 Sum_probs=90.6
Q ss_pred CCCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcC-CCcHHHHHHhcCCCC
Q 022560 182 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD-GDQKEYAKQKLQLGS 260 (295)
Q Consensus 182 ~~~v~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~-~~~~~l~~~~~~V~~ 260 (295)
.+.|..++.++|.+++. ..++++++|+||++||++|+.+.|.+.++++.+++ +.|+.||++ ++ .+++ ++|+|.+
T Consensus 4 ~~~v~~l~~~~~~~~~~-~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~--v~~~~vd~~~~~-~~~~-~~~~v~~ 78 (111)
T 2pu9_C 4 VGKVTEVNKDTFWPIVK-AAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYLD--VIFLKLDCNQEN-KTLA-KELGIRV 78 (111)
T ss_dssp TTSEEEECTTTHHHHHT-TCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEECSSTT-HHHH-HHHCCSB
T ss_pred cCccEEechHHHHHHHH-hcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCCC--eEEEEEecCcch-HHHH-HHcCCCe
Confidence 46789999999999885 22578999999999999999999999999999876 999999998 55 8999 9999999
Q ss_pred CCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 261 FPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 261 ~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
+||++++++|+. ...+.| . +.++|.++|+++
T Consensus 79 ~Pt~~~~~~G~~-~~~~~G-~-~~~~l~~~l~~~ 109 (111)
T 2pu9_C 79 VPTFKILKENSV-VGEVTG-A-KYDKLLEAIQAA 109 (111)
T ss_dssp SSEEEEESSSSE-EEEEES-S-CHHHHHHHHHHH
T ss_pred eeEEEEEeCCcE-EEEEcC-C-CHHHHHHHHHHh
Confidence 999999988873 445556 4 589999999875
No 39
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.81 E-value=5.3e-19 Score=135.73 Aligned_cols=106 Identities=22% Similarity=0.352 Sum_probs=93.6
Q ss_pred CCCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCC
Q 022560 182 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSF 261 (295)
Q Consensus 182 ~~~v~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~ 261 (295)
++.|..++.++|++.+. .++++++|+||++||++|+.+.|.|+++++.+++ ++.|+.||++++ .+++ ++|+|.++
T Consensus 6 ~~~v~~l~~~~~~~~~~--~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-~v~~~~v~~~~~-~~~~-~~~~v~~~ 80 (115)
T 1thx_A 6 SKGVITITDAEFESEVL--KAEQPVLVYFWASWCGPCQLMSPLINLAANTYSD-RLKVVKLEIDPN-PTTV-KKYKVEGV 80 (115)
T ss_dssp CCSEEECCGGGHHHHTT--TCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTT-TCEEEEEESTTC-HHHH-HHTTCCSS
T ss_pred cCceEEeeccchhhHhh--cCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCC-cEEEEEEEcCCC-HHHH-HHcCCCce
Confidence 45689999999998652 4789999999999999999999999999999987 699999999999 8999 99999999
Q ss_pred CeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 262 PTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 262 Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
||+++|++|+. ...+.| ..+.++|.++|+++
T Consensus 81 Pt~~~~~~G~~-~~~~~g-~~~~~~l~~~l~~~ 111 (115)
T 1thx_A 81 PALRLVKGEQI-LDSTEG-VISKDKLLSFLDTH 111 (115)
T ss_dssp SEEEEEETTEE-EEEEES-CCCHHHHHHHHHHH
T ss_pred eEEEEEcCCEE-EEEecC-CCCHHHHHHHHHHH
Confidence 99999987763 445666 78999999999875
No 40
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.81 E-value=1.8e-19 Score=140.33 Aligned_cols=107 Identities=21% Similarity=0.443 Sum_probs=92.1
Q ss_pred CCCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCC
Q 022560 182 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSF 261 (295)
Q Consensus 182 ~~~v~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~ 261 (295)
++.|..+++++|.+.+. .+++++||+||++||++|+.+.|.|+++++.+.+ ++.|+.||++++ .+++ ++|+|.++
T Consensus 2 ~~~v~~l~~~~f~~~~~--~~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~~-~~~~-~~~~v~~~ 76 (122)
T 3aps_A 2 PQASIDLTPQTFNEKVL--QGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKG-KVRAGKVDCQAY-PQTC-QKAGIKAY 76 (122)
T ss_dssp CCCSEECCHHHHHHHTT--TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTTC-HHHH-HHTTCCSS
T ss_pred CcchhcCCHHHHHHHHh--cCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEeCcCC-HHHH-HHcCCCcc
Confidence 35688999999966432 4789999999999999999999999999999987 799999999999 8999 99999999
Q ss_pred CeEEEEeCCCCCeeecCC---CCCCHHHHHHHHHHh
Q 022560 262 PTILFFPKHSSKPIKYPS---ERRDVDSLMAFVDAL 294 (295)
Q Consensus 262 Pti~~~~~g~~~~~~~~g---g~~~~e~l~~fi~~l 294 (295)
||+++|++|+. +..+.| +..+.++|.++|+++
T Consensus 77 Pt~~~~~~~~~-~~~~~g~~~~~~~~~~l~~~l~~~ 111 (122)
T 3aps_A 77 PSVKLYQYERA-KKSIWEEQINSRDAKTIAALIYGK 111 (122)
T ss_dssp SEEEEEEEEGG-GTEEEEEEECCSCHHHHHHHHHHH
T ss_pred ceEEEEeCCCc-cceeeccccCcCCHHHHHHHHHHH
Confidence 99999988775 444554 137999999999864
No 41
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.80 E-value=3.8e-19 Score=136.44 Aligned_cols=105 Identities=11% Similarity=0.299 Sum_probs=86.6
Q ss_pred ceecCc-ccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCCCe
Q 022560 185 LVTLNR-TGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPT 263 (295)
Q Consensus 185 v~~lt~-~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~Pt 263 (295)
|.++++ ++|++++.....+++++|+||++||++|+.+.|.++++++.++..++.|+.||++++ .+++ ++|+|.++||
T Consensus 2 v~~i~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~~-~~~~-~~~~v~~~Pt 79 (112)
T 3d6i_A 2 VIEINDQEQFTYLTTTAAGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADEN-SEIS-ELFEISAVPY 79 (112)
T ss_dssp EEEECCHHHHHHHHTTTTTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTTC-HHHH-HHTTCCSSSE
T ss_pred ccccCCHHHHHHHHhcccCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEecccC-HHHH-HHcCCCcccE
Confidence 677887 999998862234899999999999999999999999999996443699999999999 8999 9999999999
Q ss_pred EEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 264 ILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 264 i~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
+++|++|+. +..+.| . ..++|.++|+++
T Consensus 80 ~~~~~~G~~-~~~~~G-~-~~~~l~~~l~~~ 107 (112)
T 3d6i_A 80 FIIIHKGTI-LKELSG-A-DPKEYVSLLEDC 107 (112)
T ss_dssp EEEEETTEE-EEEECS-C-CHHHHHHHHHHH
T ss_pred EEEEECCEE-EEEecC-C-CHHHHHHHHHHH
Confidence 999987763 455666 3 566799999864
No 42
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.80 E-value=1.8e-19 Score=142.53 Aligned_cols=107 Identities=22% Similarity=0.357 Sum_probs=93.5
Q ss_pred CCCCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCC
Q 022560 181 NSQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGS 260 (295)
Q Consensus 181 ~~~~v~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~ 260 (295)
.+..|+.++.++|++.+ .++++++||+||++||++|+.+.|.++++++.+++ ++.|+.||++++ .+++ ++|+|.+
T Consensus 20 m~~~v~~l~~~~f~~~~--~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-~v~~~~vd~~~~-~~l~-~~~~v~~ 94 (128)
T 2o8v_B 20 HSDKIIHLTDDSFDTDV--LKADGAILVDFWAEWCGPAKMIAPILDEIADEYQG-KLTVAKLNIDQN-PGTA-PKYGIRG 94 (128)
T ss_dssp -CCCSEEECTTTHHHHT--TTCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTT-TEEEEEEETTTC-CTTS-GGGTCCS
T ss_pred cccccEecChhhHHHHH--HhcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEECCCC-HHHH-HHcCCCc
Confidence 44568999999999765 24789999999999999999999999999999987 699999999998 8899 9999999
Q ss_pred CCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 261 FPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 261 ~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
+||+++|++|+. +..+.| ..+.++|.++|+++
T Consensus 95 ~Pt~~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 126 (128)
T 2o8v_B 95 IPTLLLFKNGEV-AATKVG-ALSKGQLKEFLDAN 126 (128)
T ss_dssp SSEEEEEETTEE-EEEEES-CCCHHHHHHHHHHH
T ss_pred cCEEEEEeCCEE-EEEEcC-CCCHHHHHHHHHHh
Confidence 999999987763 455666 78999999999875
No 43
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.80 E-value=4.5e-19 Score=133.21 Aligned_cols=101 Identities=21% Similarity=0.392 Sum_probs=90.8
Q ss_pred ceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCCCeE
Q 022560 185 LVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTI 264 (295)
Q Consensus 185 v~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~Pti 264 (295)
|++++.++|++.+. ++++++|+||++||++|+.+.|.+.++++.+++ +.|+.||++++ .+++ ++|+|.++||+
T Consensus 1 V~~l~~~~~~~~~~---~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~v~~~~~-~~~~-~~~~v~~~Pt~ 73 (104)
T 2e0q_A 1 VIHLDSKNFDSFLA---SHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ--VGFGKLNSDEN-PDIA-ARYGVMSLPTV 73 (104)
T ss_dssp CEECCTTTHHHHHH---HSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTTC-HHHH-HHTTCCSSCEE
T ss_pred CeecCHHHHHHHHh---cCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC--ceEEEEECCCC-HHHH-HhCCccccCEE
Confidence 56789999999885 789999999999999999999999999999977 99999999999 8999 99999999999
Q ss_pred EEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 265 LFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 265 ~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
++|++|+. ...+.| ..+.++|.++|+++
T Consensus 74 ~~~~~g~~-~~~~~g-~~~~~~l~~~l~~~ 101 (104)
T 2e0q_A 74 IFFKDGEP-VDEIIG-AVPREEIEIRIKNL 101 (104)
T ss_dssp EEEETTEE-EEEEES-CCCHHHHHHHHHHH
T ss_pred EEEECCeE-hhhccC-CCCHHHHHHHHHHH
Confidence 99987763 445666 68999999999875
No 44
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.80 E-value=6e-20 Score=139.68 Aligned_cols=97 Identities=13% Similarity=0.155 Sum_probs=75.1
Q ss_pred CcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCCCeEEEEe
Q 022560 189 NRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILFFP 268 (295)
Q Consensus 189 t~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~Pti~~~~ 268 (295)
+.++|++++. ++++++|+|||+||++|+.+.|.++++++.+. ++.|+.||++++ ++++ ++|+|.++||+++|+
T Consensus 7 ~~~~~~~~~~---~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~--~~~~~~vd~~~~-~~l~-~~~~v~~~Pt~~~~~ 79 (105)
T 4euy_A 7 TIEELATYIE---EQQLVLLFIKTENCGVCDVMLRKVNYVLENYN--YVEKIEILLQDM-QEIA-GRYAVFTGPTVLLFY 79 (105)
T ss_dssp ---CCSSSTT---CSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT--TEEEEEEEECCC-----------CCCCEEEEEE
T ss_pred CHHHHHHHHh---cCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC--CceEEEEECCCC-HHHH-HhcCCCCCCEEEEEe
Confidence 4567777664 78999999999999999999999999999985 499999999999 8999 999999999999999
Q ss_pred CCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 269 KHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 269 ~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
+|+. +..+.| ..+.++|.++|+++
T Consensus 80 ~G~~-~~~~~g-~~~~~~l~~~l~~~ 103 (105)
T 4euy_A 80 NGKE-ILRESR-FISLENLERTIQLF 103 (105)
T ss_dssp TTEE-EEEEES-SCCHHHHHHHHHTT
T ss_pred CCeE-EEEEeC-CcCHHHHHHHHHHh
Confidence 8763 455566 78999999999875
No 45
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.80 E-value=6e-19 Score=133.22 Aligned_cols=103 Identities=22% Similarity=0.409 Sum_probs=91.5
Q ss_pred ceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCCCeE
Q 022560 185 LVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTI 264 (295)
Q Consensus 185 v~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~Pti 264 (295)
|..++.++|++.+. .++++++|+||++||++|+.+.|.+.++++.+++ ++.|+.||++++ ++++ ++|+|.++||+
T Consensus 2 v~~~~~~~~~~~~~--~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~-~~~~-~~~~v~~~Pt~ 76 (105)
T 1fb6_A 2 VQDVNDSSWKEFVL--ESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSG-KIAVYKLNTDEA-PGIA-TQYNIRSIPTV 76 (105)
T ss_dssp CEECCTTTHHHHTT--TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTC-HHHH-HHTTCCSSSEE
T ss_pred ceechhhhHHHHHh--cCCCcEEEEEECCCChHHHHHHHHHHHHHHHhcC-ceEEEEEcCcch-HHHH-HhCCCCcccEE
Confidence 67889999998664 3688999999999999999999999999999987 699999999999 8999 99999999999
Q ss_pred EEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 265 LFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 265 ~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
++|++|+. ...+.| ..+.++|.++|+++
T Consensus 77 ~~~~~g~~-~~~~~G-~~~~~~l~~~l~~~ 104 (105)
T 1fb6_A 77 LFFKNGER-KESIIG-AVPKSTLTDSIEKY 104 (105)
T ss_dssp EEEETTEE-EEEEEE-CCCHHHHHHHHHHH
T ss_pred EEEeCCeE-EEEEec-CCCHHHHHHHHHhh
Confidence 99988763 445666 68999999999876
No 46
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.80 E-value=4.6e-19 Score=153.85 Aligned_cols=107 Identities=23% Similarity=0.523 Sum_probs=96.7
Q ss_pred cCCCCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCC--CeEEEEEEcCCCcHHHHHHhcC
Q 022560 180 FNSQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGN--GVKVGKFRADGDQKEYAKQKLQ 257 (295)
Q Consensus 180 ~~~~~v~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~--~v~~~~vd~~~~~~~l~~~~~~ 257 (295)
...+.|+.+++++|++++. ++++++|+|||+||++|+.+.|.|.++++.+++. .+.|+.||++++ .+++ ++|+
T Consensus 12 ~~~~~v~~l~~~~~~~~~~---~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~-~~l~-~~~~ 86 (241)
T 3idv_A 12 KEENGVLVLNDANFDNFVA---DKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSA-SVLA-SRFD 86 (241)
T ss_dssp EEETTEEEECTTTHHHHHT---TCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTTC-HHHH-HHTT
T ss_pred ccCCCcEEecccCHHHHHh---cCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccCC-HHHH-HhcC
Confidence 3456799999999999886 7899999999999999999999999999999873 399999999999 9999 9999
Q ss_pred CCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 258 LGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 258 V~~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
|.++||+++|++|+ .+.+.| .++.++|.+||.++
T Consensus 87 v~~~Pt~~~~~~g~--~~~~~g-~~~~~~l~~~i~~~ 120 (241)
T 3idv_A 87 VSGYPTIKILKKGQ--AVDYEG-SRTQEEIVAKVREV 120 (241)
T ss_dssp CCSSSEEEEEETTE--EEECCS-CSCHHHHHHHHHHH
T ss_pred CCcCCEEEEEcCCC--cccccC-cccHHHHHHHHhhc
Confidence 99999999999887 567887 79999999999864
No 47
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.80 E-value=5.1e-19 Score=135.44 Aligned_cols=106 Identities=18% Similarity=0.312 Sum_probs=90.6
Q ss_pred CCceec-CcccHHHHHhh-cCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCC
Q 022560 183 QNLVTL-NRTGMENLARL-DHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGS 260 (295)
Q Consensus 183 ~~v~~l-t~~~f~~~i~~-~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~ 260 (295)
+.|..+ +.++|++++.. ...+++++|+||++||++|+.+.|.|+++++.+.+ ++.|+.||++++ .+++ ++|+|.+
T Consensus 2 ~~v~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~~-~~~~-~~~~v~~ 78 (112)
T 1ep7_A 2 GSVIVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAG-KVIFLKVDVDAV-AAVA-EAAGITA 78 (112)
T ss_dssp CSEEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTTT-HHHH-HHHTCCB
T ss_pred CcEEEecCHHHHHHHHHhhcccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC-CeEEEEEECCch-HHHH-HHcCCCc
Confidence 457777 56899998862 11288999999999999999999999999999986 699999999998 9999 9999999
Q ss_pred CCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 261 FPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 261 ~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
+||+++|++|+. ...+.| . +.++|.++|+++
T Consensus 79 ~Pt~~~~~~G~~-~~~~~G-~-~~~~l~~~l~~~ 109 (112)
T 1ep7_A 79 MPTFHVYKDGVK-ADDLVG-A-SQDKLKALVAKH 109 (112)
T ss_dssp SSEEEEEETTEE-EEEEES-C-CHHHHHHHHHHH
T ss_pred ccEEEEEECCeE-EEEEcC-C-CHHHHHHHHHHH
Confidence 999999988763 445666 5 899999999875
No 48
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.80 E-value=9.3e-19 Score=133.26 Aligned_cols=102 Identities=12% Similarity=0.128 Sum_probs=86.5
Q ss_pred ceec-CcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCCCe
Q 022560 185 LVTL-NRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPT 263 (295)
Q Consensus 185 v~~l-t~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~Pt 263 (295)
|.++ +.++|++++.. .++++++|+||++||++|+.+.|.++++++.+. ++.|+.||++++ .+++ ++|+|.++||
T Consensus 3 v~~i~~~~~~~~~~~~-~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~--~~~~~~vd~~~~-~~~~-~~~~v~~~Pt 77 (107)
T 1gh2_A 3 VKPVGSDPDFQPELSG-AGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYP--QAVFLEVDVHQC-QGTA-ATNNISATPT 77 (107)
T ss_dssp EEEECSGGGHHHHHHH-TTTSCEEEEEECSSCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTS-HHHH-HHTTCCSSSE
T ss_pred eEEecCHHHHHHHHHh-CCCCEEEEEEECCCChhhHHHHHHHHHHHHHCC--CcEEEEEECccC-HHHH-HhcCCCcccE
Confidence 4555 56899998742 368999999999999999999999999999994 499999999998 9999 9999999999
Q ss_pred EEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 264 ILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 264 i~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
+++|++|+. ...+.| .+.++|.++|+++
T Consensus 78 ~~~~~~G~~-~~~~~G--~~~~~l~~~l~~~ 105 (107)
T 1gh2_A 78 FQFFRNKVR-IDQYQG--ADAVGLEEKIKQH 105 (107)
T ss_dssp EEEEETTEE-EEEEES--SCHHHHHHHHHHH
T ss_pred EEEEECCeE-EEEEeC--CCHHHHHHHHHHh
Confidence 999988863 445655 4556799999874
No 49
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.79 E-value=8.3e-19 Score=134.87 Aligned_cols=102 Identities=18% Similarity=0.298 Sum_probs=90.9
Q ss_pred CCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCCC
Q 022560 183 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 262 (295)
Q Consensus 183 ~~v~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~P 262 (295)
+....++.++|+++++ +++++||+||++||++|+.+.|.+.++++.+++ +.|+.||++++ ..++ ++|+|.++|
T Consensus 9 ~~~~~~~~~~f~~~~~---~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~--v~~~~vd~~~~-~~~~-~~~~v~~~P 81 (112)
T 1syr_A 9 MVKIVTSQAEFDSIIS---QNELVIVDFFAEWCGPCKRIAPFYEECSKTYTK--MVFIKVDVDEV-SEVT-EKENITSMP 81 (112)
T ss_dssp CCEEECSHHHHHHHHH---HCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTTT-HHHH-HHTTCCSSS
T ss_pred eEEEECCHHHHHHHHc---cCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC--CEEEEEECCCC-HHHH-HHcCCCccc
Confidence 4567789999999886 789999999999999999999999999999875 99999999998 8999 999999999
Q ss_pred eEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 263 TILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 263 ti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
|+++|++|+. +..+.| . +.++|.++|+++
T Consensus 82 t~~~~~~G~~-~~~~~G-~-~~~~l~~~l~~~ 110 (112)
T 1syr_A 82 TFKVYKNGSS-VDTLLG-A-NDSALKQLIEKY 110 (112)
T ss_dssp EEEEEETTEE-EEEEES-C-CHHHHHHHHHTT
T ss_pred EEEEEECCcE-EEEEeC-C-CHHHHHHHHHHh
Confidence 9999998763 445666 5 999999999875
No 50
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.79 E-value=4.5e-19 Score=138.74 Aligned_cols=103 Identities=16% Similarity=0.138 Sum_probs=85.7
Q ss_pred CCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCCC
Q 022560 183 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 262 (295)
Q Consensus 183 ~~v~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~P 262 (295)
+.|.+++.++|.+.+...+.+++|+|+|||+||++|+.+.|.|++++++|.+ +.|++||+++. + .+|+|+++|
T Consensus 3 G~v~~it~~~f~~~v~~~~~~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~~--v~f~kvd~d~~----~-~~~~v~~~P 75 (118)
T 3evi_A 3 GELREISGNQYVNEVTNAEEDVWVIIHLYRSSIPMCLLVNQHLSLLARKFPE--TKFVKAIVNSC----I-QHYHDNCLP 75 (118)
T ss_dssp CSCEECCGGGHHHHTTTCCTTCEEEEEEECTTSHHHHHHHHHHHHHHHHCTT--SEEEEEEGGGT----S-TTCCGGGCS
T ss_pred cceEEeCHHHHHHHHHhcCCCCeEEEEEeCCCChHHHHHHHHHHHHHHHCCC--CEEEEEEhHHh----H-HHCCCCCCC
Confidence 4678899999998775222344999999999999999999999999999976 99999999986 5 799999999
Q ss_pred eEEEEeCCCCCeeecCC------CCCCHHHHHHHHHH
Q 022560 263 TILFFPKHSSKPIKYPS------ERRDVDSLMAFVDA 293 (295)
Q Consensus 263 ti~~~~~g~~~~~~~~g------g~~~~e~l~~fi~~ 293 (295)
|+++|++|+. +..+.| ...+.++|..+|.+
T Consensus 76 T~~~fk~G~~-v~~~~G~~~~gg~~~~~~~le~~L~~ 111 (118)
T 3evi_A 76 TIFVYKNGQI-EAKFIGIIECGGINLKLEELEWKLAE 111 (118)
T ss_dssp EEEEEETTEE-EEEEESTTTTTCSSCCHHHHHHHHHT
T ss_pred EEEEEECCEE-EEEEeChhhhCCCCCCHHHHHHHHHH
Confidence 9999999974 333333 24689999999975
No 51
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.79 E-value=8.4e-19 Score=136.10 Aligned_cols=106 Identities=20% Similarity=0.368 Sum_probs=92.6
Q ss_pred CCCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCC
Q 022560 182 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSF 261 (295)
Q Consensus 182 ~~~v~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~ 261 (295)
...|..++.++|.+.+. .+++++||+||++||++|+.+.|.|.++++.+++ ++.|+.||++++ ..++ ++|+|.++
T Consensus 11 ~~~v~~l~~~~~~~~~~--~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~-~~~~-~~~~i~~~ 85 (121)
T 2i1u_A 11 KSATIKVTDASFATDVL--SSNKPVLVDFWATWCGPCKMVAPVLEEIATERAT-DLTVAKLDVDTN-PETA-RNFQVVSI 85 (121)
T ss_dssp -CCSEECCTTTHHHHTT--TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTC-HHHH-HHTTCCSS
T ss_pred cccceecCHHHHHHHHH--hCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEECCCC-HHHH-HhcCCCcC
Confidence 45688999999987553 4688999999999999999999999999999987 699999999999 8999 99999999
Q ss_pred CeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 262 PTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 262 Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
||+++|++|+. +..+.| ..+.++|.++|+++
T Consensus 86 Pt~~~~~~g~~-~~~~~G-~~~~~~l~~~l~~~ 116 (121)
T 2i1u_A 86 PTLILFKDGQP-VKRIVG-AKGKAALLRELSDV 116 (121)
T ss_dssp SEEEEEETTEE-EEEEES-CCCHHHHHHHTCSC
T ss_pred CEEEEEECCEE-EEEecC-CCCHHHHHHHHHHH
Confidence 99999997763 455666 78999999998764
No 52
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.79 E-value=5.5e-19 Score=157.90 Aligned_cols=107 Identities=18% Similarity=0.372 Sum_probs=94.9
Q ss_pred CCCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCC
Q 022560 182 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSF 261 (295)
Q Consensus 182 ~~~v~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~ 261 (295)
.+.|+++|.++|++++. .+.+++|||+|||+||++|+.+.|.|+++++.+++ ++.|++||++++ ++++ ++|+|.++
T Consensus 6 ~~~v~~~~~~~f~~~~~-~~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~~-~~~~-~~~~v~~~ 81 (287)
T 3qou_A 6 VENIVNINESNLQQVLE-QSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNG-QFILAKLDCDAE-QMIA-AQFGLRAI 81 (287)
T ss_dssp CTTEEECCTTTHHHHHT-TTTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTS-SSEEEEEETTTC-HHHH-HTTTCCSS
T ss_pred CCccEECCHHHHHHHHH-hcCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCC-CeEEEEEeCccC-HHHH-HHcCCCCC
Confidence 45789999999999774 23489999999999999999999999999999987 799999999999 9999 99999999
Q ss_pred CeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 262 PTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 262 Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
||+++|++|+. +..+.| ..+.+.|.++|..+
T Consensus 82 Pt~~~~~~G~~-~~~~~g-~~~~~~l~~~l~~~ 112 (287)
T 3qou_A 82 PTVYLFQNGQP-VDGFQG-PQPEEAIRALLDXV 112 (287)
T ss_dssp SEEEEEETTEE-EEEEES-CCCHHHHHHHHHHH
T ss_pred CeEEEEECCEE-EEEeeC-CCCHHHHHHHHHHH
Confidence 99999988763 455666 78999999999764
No 53
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.79 E-value=1.2e-19 Score=143.52 Aligned_cols=109 Identities=28% Similarity=0.579 Sum_probs=94.4
Q ss_pred CCCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcC-CCeEEEEEEcCCCcHHHHHHhcCCCC
Q 022560 182 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAG-NGVKVGKFRADGDQKEYAKQKLQLGS 260 (295)
Q Consensus 182 ~~~v~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~-~~v~~~~vd~~~~~~~l~~~~~~V~~ 260 (295)
...|..++.++|+..+. .+++++||+||++||++|+.+.|.|.++++.+++ ..+.|+.||++++ ..++ ++|+|.+
T Consensus 6 ~~~v~~l~~~~~~~~~~--~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~-~~~~-~~~~v~~ 81 (133)
T 2dj3_A 6 SGPVKVVVGKTFDAIVM--DPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATAN-DITN-DQYKVEG 81 (133)
T ss_dssp SCSSEECCTTTCCCCCT--CTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTS-CCCC-SSCCCSS
T ss_pred CCceEEEcCCCHHHHhc--cCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcC-HHHH-hhcCCCc
Confidence 45789999999988764 3589999999999999999999999999999985 3699999999998 7888 8999999
Q ss_pred CCeEEEEeCCCCC-eeecCCCCCCHHHHHHHHHHh
Q 022560 261 FPTILFFPKHSSK-PIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 261 ~Pti~~~~~g~~~-~~~~~gg~~~~e~l~~fi~~l 294 (295)
+||+++|++|+.. .+.+.||..+.++|.+||+++
T Consensus 82 ~Pt~~~~~~g~~~~~~~~~gg~~~~~~l~~~l~~~ 116 (133)
T 2dj3_A 82 FPTIYFAPSGDKKNPIKFEGGNRDLEHLSKFIDEH 116 (133)
T ss_dssp SSEEEEECTTCTTSCEECCSSCCSTTHHHHHHHHH
T ss_pred CCEEEEEeCCCcccceEecCCCcCHHHHHHHHHHh
Confidence 9999999988752 346776578999999999875
No 54
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.79 E-value=1.6e-18 Score=135.51 Aligned_cols=107 Identities=21% Similarity=0.392 Sum_probs=91.4
Q ss_pred CCCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCC
Q 022560 182 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSF 261 (295)
Q Consensus 182 ~~~v~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~ 261 (295)
.+.|..+++++|.+.+. ..++++++|+||++||++|+.+.|.++++++.+++ +.|+.||+++.+.+++ ++|+|.++
T Consensus 17 ~~~v~~l~~~~~~~~~~-~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~~--~~~~~vd~~~~~~~~~-~~~~v~~~ 92 (124)
T 1faa_A 17 VGKVTEVNKDTFWPIVK-AAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLD--VIFLKLDCNQENKTLA-KELGIRVV 92 (124)
T ss_dssp TTSEEEECTTTHHHHHH-HTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEECSSTTHHHH-HHHCCSSS
T ss_pred CCceEEecchhHHHHHH-hcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCCC--CEEEEEecCcchHHHH-HHcCCCee
Confidence 46788999999998875 23688999999999999999999999999999876 9999999984338999 99999999
Q ss_pred CeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHhC
Q 022560 262 PTILFFPKHSSKPIKYPSERRDVDSLMAFVDALR 295 (295)
Q Consensus 262 Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l~ 295 (295)
||+++|++|+. +..+.| . ..++|.++|++++
T Consensus 93 Pt~~~~~~G~~-~~~~~G-~-~~~~l~~~i~~~~ 123 (124)
T 1faa_A 93 PTFKILKENSV-VGEVTG-A-KYDKLLEAIQAAR 123 (124)
T ss_dssp SEEEEEETTEE-EEEEES-S-CHHHHHHHHHHHT
T ss_pred eEEEEEeCCcE-EEEEcC-C-CHHHHHHHHHHhh
Confidence 99999988873 445556 4 4899999998864
No 55
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.79 E-value=2.2e-19 Score=138.62 Aligned_cols=107 Identities=25% Similarity=0.586 Sum_probs=94.8
Q ss_pred CCCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcC--CCeEEEEEEcCCCcHHHHHHhcCCC
Q 022560 182 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAG--NGVKVGKFRADGDQKEYAKQKLQLG 259 (295)
Q Consensus 182 ~~~v~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~--~~v~~~~vd~~~~~~~l~~~~~~V~ 259 (295)
++.|..++.++|++++. ++++++|+||++||++|+.+.|.+.++++.+++ ..+.|+.||++++ ..++ ++|+|.
T Consensus 6 ~~~v~~l~~~~~~~~~~---~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~-~~~~-~~~~v~ 80 (120)
T 1mek_A 6 EDHVLVLRKSNFAEALA---AHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEE-SDLA-QQYGVR 80 (120)
T ss_dssp ETTEEECCTTTHHHHHH---HCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTC-CSSH-HHHTCC
T ss_pred CCCcEEechhhHHHHHc---cCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCC-HHHH-HHCCCC
Confidence 35689999999999876 689999999999999999999999999999875 3699999999998 8899 999999
Q ss_pred CCCeEEEEeCCCCC-eeecCCCCCCHHHHHHHHHHh
Q 022560 260 SFPTILFFPKHSSK-PIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 260 ~~Pti~~~~~g~~~-~~~~~gg~~~~e~l~~fi~~l 294 (295)
++||+++|++|+.. ...+.| ..+.++|.+||+++
T Consensus 81 ~~Pt~~~~~~g~~~~~~~~~g-~~~~~~l~~~l~~~ 115 (120)
T 1mek_A 81 GYPTIKFFRNGDTASPKEYTA-GREADDIVNWLKKR 115 (120)
T ss_dssp SSSEEEEEESSCSSSCEECCC-CSSHHHHHHHHHTT
T ss_pred cccEEEEEeCCCcCCcccccC-ccCHHHHHHHHHhc
Confidence 99999999888752 267777 78999999999875
No 56
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.78 E-value=2.3e-18 Score=147.45 Aligned_cols=106 Identities=24% Similarity=0.556 Sum_probs=95.8
Q ss_pred CCCCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCC
Q 022560 181 NSQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGS 260 (295)
Q Consensus 181 ~~~~v~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~ 260 (295)
....|..++.++|+..+. +++++||+|||+||++|+.+.|.|.++++.+++ .+.|+.||++++ ..++ ++|+|.+
T Consensus 95 ~~~~v~~l~~~~f~~~~~---~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~-~v~~~~vd~~~~-~~l~-~~~~v~~ 168 (210)
T 3apq_A 95 DDPEIITLERREFDAAVN---SGELWFVNFYSPGCSHCHDLAPTWREFAKEVDG-LLRIGAVNCGDD-RMLC-RMKGVNS 168 (210)
T ss_dssp TCTTSEECCHHHHHHHHH---HSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBT-TBEEEEEETTTC-HHHH-HHTTCCS
T ss_pred CCCceEEecHHHHHHHHc---cCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcC-ceEEEEEECCcc-HHHH-HHcCCCc
Confidence 346788999999999885 789999999999999999999999999999987 799999999999 9999 9999999
Q ss_pred CCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 261 FPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 261 ~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
+||+++|++|+. +..+.| ..+.++|.+||+++
T Consensus 169 ~Pt~~~~~~G~~-~~~~~G-~~~~~~l~~~i~~~ 200 (210)
T 3apq_A 169 YPSLFIFRSGMA-AVKYNG-DRSKESLVAFAMQH 200 (210)
T ss_dssp SSEEEEECTTSC-CEECCS-CCCHHHHHHHHHHH
T ss_pred CCeEEEEECCCc-eeEecC-CCCHHHHHHHHHHh
Confidence 999999987764 667777 79999999999864
No 57
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.78 E-value=2.4e-18 Score=129.99 Aligned_cols=101 Identities=20% Similarity=0.358 Sum_probs=87.7
Q ss_pred eec-CcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCCCeE
Q 022560 186 VTL-NRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTI 264 (295)
Q Consensus 186 ~~l-t~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~Pti 264 (295)
..+ +.++|++.+. ..++++++|+||++||++|+.+.|.++++++.+++ +.|+.||++++ ++++ ++|+|.++||+
T Consensus 3 ~~i~~~~~~~~~l~-~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~vd~~~~-~~~~-~~~~v~~~Pt~ 77 (105)
T 3m9j_A 3 KQIESKTAFQEALD-AAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN--VIFLEVDVDDC-QDVA-SESEVKSMPTF 77 (105)
T ss_dssp EECCSHHHHHHHHH-HTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT--SEEEEEETTTC-HHHH-HHTTCCBSSEE
T ss_pred EEcCCHHHHHHHHH-hcCCCeEEEEEECCCChhhHHHHHHHHHHHHHccC--eEEEEEEhhhh-HHHH-HHcCCCcCcEE
Confidence 445 5578888775 23689999999999999999999999999999977 99999999999 9999 99999999999
Q ss_pred EEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 265 LFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 265 ~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
++|++|+. +..+.| . +.++|.++|+++
T Consensus 78 ~~~~~g~~-~~~~~g-~-~~~~l~~~l~~~ 104 (105)
T 3m9j_A 78 QFFKKGQK-VGEFSG-A-NKEKLEATINEL 104 (105)
T ss_dssp EEEETTEE-EEEEES-S-CHHHHHHHHHHH
T ss_pred EEEECCeE-EEEEeC-C-CHHHHHHHHHHh
Confidence 99988773 455666 5 999999999875
No 58
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.78 E-value=6.5e-19 Score=136.85 Aligned_cols=105 Identities=25% Similarity=0.552 Sum_probs=90.8
Q ss_pred CCCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcC----CCeEEEEEEcCCCcHHHHHHhcC
Q 022560 182 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAG----NGVKVGKFRADGDQKEYAKQKLQ 257 (295)
Q Consensus 182 ~~~v~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~----~~v~~~~vd~~~~~~~l~~~~~~ 257 (295)
++.|..+++++|++.+. .+++++||+|||+||++|+.+.|.|+++++.+++ ..+.|+.||++++ . ++ + +
T Consensus 6 ~~~v~~l~~~~f~~~v~--~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~-~-~~-~--~ 78 (121)
T 2djj_A 6 EGPVTVVVAKNYNEIVL--DDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAN-D-VP-D--E 78 (121)
T ss_dssp SCSSEECCTTTTTTSSS--CTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTS-C-CS-S--C
T ss_pred CCCeEEecccCHHHHhh--cCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECccc-c-cc-c--c
Confidence 45689999999998752 4789999999999999999999999999999975 2699999999988 3 56 4 9
Q ss_pred CCCCCeEEEEeCCCCC-eeecCCCCCCHHHHHHHHHHh
Q 022560 258 LGSFPTILFFPKHSSK-PIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 258 V~~~Pti~~~~~g~~~-~~~~~gg~~~~e~l~~fi~~l 294 (295)
|.++||+++|++|++. ...+.| ..+.++|.+||+++
T Consensus 79 v~~~Pt~~~~~~~~~~~~~~~~G-~~~~~~l~~~i~~~ 115 (121)
T 2djj_A 79 IQGFPTIKLYPAGAKGQPVTYSG-SRTVEDLIKFIAEN 115 (121)
T ss_dssp CSSSSEEEEECSSCTTSCCCCCC-CSCHHHHHHHHHHT
T ss_pred cCcCCeEEEEeCcCCCCceEecC-CCCHHHHHHHHHhc
Confidence 9999999999988653 567777 78999999999875
No 59
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.78 E-value=2.8e-18 Score=155.07 Aligned_cols=108 Identities=22% Similarity=0.481 Sum_probs=96.1
Q ss_pred CCCCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcC--CCcHHHHHHhcCC
Q 022560 181 NSQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD--GDQKEYAKQKLQL 258 (295)
Q Consensus 181 ~~~~v~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~--~~~~~l~~~~~~V 258 (295)
....|++|+.++|++++. +.+++|||+|||+||++|+.+.|.|+++++.+.+ .+.|+.||++ ++ .+++ ++|+|
T Consensus 15 ~~~~vv~lt~~~f~~~i~--~~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~-~~~~~~v~~d~~~~-~~l~-~~~~I 89 (298)
T 3ed3_A 15 SDPHISELTPKSFDKAIH--NTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDG-VVQVAAVNCDLNKN-KALC-AKYDV 89 (298)
T ss_dssp SCTTCEECCHHHHHHHHT--SSSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTSTTT-HHHH-HHTTC
T ss_pred CCCCeEEeCHHHHHHHHH--hCCCeEEEEEECCCCHHHHHHHHHHHHHHHHccC-CcEEEEEEccCccC-HHHH-HhCCC
Confidence 446799999999999884 3678999999999999999999999999999987 6999999998 45 8999 99999
Q ss_pred CCCCeEEEEeCCCC----------------CeeecCCCCCCHHHHHHHHHHh
Q 022560 259 GSFPTILFFPKHSS----------------KPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 259 ~~~Pti~~~~~g~~----------------~~~~~~gg~~~~e~l~~fi~~l 294 (295)
.++||+++|++|+. ....|.| .++.+.|.+||.+.
T Consensus 90 ~~~Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G-~r~~~~i~~fl~~~ 140 (298)
T 3ed3_A 90 NGFPTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSG-ARTLAPIVDFSLSR 140 (298)
T ss_dssp CBSSEEEEEECCCC-------------CCCEEEECCS-CCSHHHHHHHHHTT
T ss_pred CccceEEEEECCceeecccccccccccccccceeecC-CcCHHHHHHHHHHh
Confidence 99999999999861 3678888 79999999999764
No 60
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.78 E-value=2.7e-18 Score=134.95 Aligned_cols=106 Identities=19% Similarity=0.261 Sum_probs=90.3
Q ss_pred CCCceec-CcccHHHHHhhc-CCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCC
Q 022560 182 SQNLVTL-NRTGMENLARLD-HRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLG 259 (295)
Q Consensus 182 ~~~v~~l-t~~~f~~~i~~~-~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~ 259 (295)
...|+.+ +.++|++.+... .+++++||+||++||++|+.+.|.|+++++.+++ +.|+.||++++ .+++ ++|+|.
T Consensus 15 ~~~v~~l~~~~~~~~~l~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~~--v~~~~vd~d~~-~~l~-~~~~v~ 90 (124)
T 1xfl_A 15 EGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPN--VLFLKVDTDEL-KSVA-SDWAIQ 90 (124)
T ss_dssp CSCCEEESSHHHHHHHHHHHHHTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCSS--EEEEEEETTTS-HHHH-HHTTCC
T ss_pred CCcEEEeCCHHHHHHHHHHhhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--cEEEEEECccC-HHHH-HHcCCC
Confidence 3557777 668898887632 2588999999999999999999999999999875 99999999998 9999 999999
Q ss_pred CCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 260 SFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 260 ~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
++||+++|++|+. +..+.| .+.++|.++|+++
T Consensus 91 ~~Pt~~~~~~G~~-~~~~~G--~~~~~l~~~l~~~ 122 (124)
T 1xfl_A 91 AMPTFMFLKEGKI-LDKVVG--AKKDELQSTIAKH 122 (124)
T ss_dssp SSSEEEEEETTEE-EEEEES--CCHHHHHHHHHHH
T ss_pred ccCEEEEEECCEE-EEEEeC--CCHHHHHHHHHHh
Confidence 9999999988763 444555 4899999999875
No 61
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.78 E-value=2.4e-18 Score=133.18 Aligned_cols=101 Identities=20% Similarity=0.395 Sum_probs=88.3
Q ss_pred ceecCc-ccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCCCe
Q 022560 185 LVTLNR-TGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPT 263 (295)
Q Consensus 185 v~~lt~-~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~Pt 263 (295)
+.++++ ++|++++. ..++++++|+||++||++|+.+.|.++++++.+ + +.|+.||++++ .+++ ++|+|.++||
T Consensus 15 v~~l~~~~~~~~~l~-~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~-~--~~~~~vd~~~~-~~~~-~~~~v~~~Pt 88 (117)
T 2xc2_A 15 LIELKQDGDLESLLE-QHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY-D--AIFVKVDVDKL-EETA-RKYNISAMPT 88 (117)
T ss_dssp EEECCSTTHHHHHHH-HTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS-S--SEEEEEETTTS-HHHH-HHTTCCSSSE
T ss_pred eEEeCCHHHHHHHHH-hCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc-C--cEEEEEECCcc-HHHH-HHcCCCccce
Confidence 788888 89998875 236889999999999999999999999999888 4 99999999999 8999 9999999999
Q ss_pred EEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 264 ILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 264 i~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
+++|++|+. +..+.| .+.++|.++|+++
T Consensus 89 ~~~~~~G~~-~~~~~G--~~~~~l~~~l~~~ 116 (117)
T 2xc2_A 89 FIAIKNGEK-VGDVVG--ASIAKVEDMIKKF 116 (117)
T ss_dssp EEEEETTEE-EEEEES--SCHHHHHHHHHHH
T ss_pred EEEEeCCcE-EEEEeC--CCHHHHHHHHHHh
Confidence 999988763 445555 5889999999875
No 62
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.77 E-value=2.8e-18 Score=129.70 Aligned_cols=103 Identities=18% Similarity=0.354 Sum_probs=89.5
Q ss_pred ceecCc-ccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCCCe
Q 022560 185 LVTLNR-TGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPT 263 (295)
Q Consensus 185 v~~lt~-~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~Pt 263 (295)
|.++++ ++|++.+.. .++++++|+||++||++|+.+.|.++++++.+++ ++.|+.||++++ .+++ ++|+|.++||
T Consensus 2 v~~l~~~~~~~~~l~~-~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~-~~~~-~~~~v~~~Pt 77 (106)
T 1xwb_A 2 VYQVKDKADLDGQLTK-ASGKLVVLDFFATWCGPCKMISPKLVELSTQFAD-NVVVLKVDVDEC-EDIA-MEYNISSMPT 77 (106)
T ss_dssp EEECCSHHHHHHHHHH-HTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETTTC-HHHH-HHTTCCSSSE
T ss_pred ceecCCHHHHHHHHHh-cCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCC-CeEEEEEeccch-HHHH-HHcCCCcccE
Confidence 567887 889887752 3688999999999999999999999999999965 699999999999 8999 9999999999
Q ss_pred EEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 264 ILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 264 i~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
+++|++|+. ...+.| .+.++|.++|+++
T Consensus 78 ~~~~~~G~~-~~~~~g--~~~~~l~~~i~~~ 105 (106)
T 1xwb_A 78 FVFLKNGVK-VEEFAG--ANAKRLEDVIKAN 105 (106)
T ss_dssp EEEEETTEE-EEEEES--CCHHHHHHHHHHT
T ss_pred EEEEcCCcE-EEEEcC--CCHHHHHHHHHHh
Confidence 999988763 445555 6889999999875
No 63
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=99.77 E-value=2.7e-18 Score=159.41 Aligned_cols=111 Identities=19% Similarity=0.227 Sum_probs=96.5
Q ss_pred cccccCCCCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHH------HHHHHHHHHhcCCCeEEEEEEcCCCcH
Q 022560 176 VADIFNSQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAME------GSYVELADKLAGNGVKVGKFRADGDQK 249 (295)
Q Consensus 176 ~~~~~~~~~v~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~------p~~~~la~~~~~~~v~~~~vd~~~~~~ 249 (295)
.+.+...+.|++|+.++|++++. ++++|||+||||||++|+... |.++++++.+++.++.|++|||+++ +
T Consensus 6 ~p~~~~~~~v~~lt~~~f~~~i~---~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~~~-~ 81 (367)
T 3us3_A 6 FPEYDGVDRVINVNAKNYKNVFK---KYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEKD-A 81 (367)
T ss_dssp CCCCCCCCCCEECCTTTHHHHHH---HCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETTTT-H
T ss_pred CCCCCCCCccEECCHHHHHHHHh---hCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCccc-H
Confidence 33444556799999999999886 689999999999999974433 6899999999875699999999999 9
Q ss_pred HHHHHhcCCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 250 EYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 250 ~l~~~~~~V~~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
++| ++|+|+++||+++|++|+ ++.|.| .++.+.|.+||.+.
T Consensus 82 ~l~-~~~~V~~~PTl~~f~~G~--~~~y~G-~~~~~~i~~~i~~~ 122 (367)
T 3us3_A 82 AVA-KKLGLTEEDSIYVFKEDE--VIEYDG-EFSADTLVEFLLDV 122 (367)
T ss_dssp HHH-HHHTCCSTTEEEEEETTE--EEECCS-CCSHHHHHHHHHHH
T ss_pred HHH-HHcCCCcCceEEEEECCc--EEEeCC-CCCHHHHHHHHHHh
Confidence 999 999999999999999886 678988 79999999999764
No 64
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.77 E-value=2.9e-18 Score=133.46 Aligned_cols=105 Identities=18% Similarity=0.250 Sum_probs=90.5
Q ss_pred CCceecCcccHHHHHhh-cCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCC
Q 022560 183 QNLVTLNRTGMENLARL-DHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSF 261 (295)
Q Consensus 183 ~~v~~lt~~~f~~~i~~-~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~ 261 (295)
+.+..++.++|++.+.. ..++++++|+||++||++|+.+.|.|+++++.+++ +.|+.||++++ .+++ ++|+|.++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~vd~~~~-~~~~-~~~~v~~~ 88 (122)
T 2vlu_A 13 EVISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN--AVFLKVDVDEL-KPIA-EQFSVEAM 88 (122)
T ss_dssp CCEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTTC-HHHH-HHTTCCSS
T ss_pred cceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--cEEEEEECCCC-HHHH-HHcCCCcc
Confidence 44667788999998753 12588999999999999999999999999999877 99999999999 9999 99999999
Q ss_pred CeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 262 PTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 262 Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
||+++|++|+. ...+.| .. .++|.++|+++
T Consensus 89 Pt~~~~~~G~~-~~~~~G-~~-~~~l~~~l~~~ 118 (122)
T 2vlu_A 89 PTFLFMKEGDV-KDRVVG-AI-KEELTAKVGLH 118 (122)
T ss_dssp SEEEEEETTEE-EEEEES-SC-HHHHHHHHHHH
T ss_pred cEEEEEeCCEE-EEEEeC-cC-HHHHHHHHHHH
Confidence 99999988763 455666 56 99999999875
No 65
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.77 E-value=9.6e-19 Score=137.94 Aligned_cols=88 Identities=18% Similarity=0.360 Sum_probs=80.2
Q ss_pred CCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCCCeEEEEeCCCCCeeecCCC
Q 022560 201 HRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSE 280 (295)
Q Consensus 201 ~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~Pti~~~~~g~~~~~~~~gg 280 (295)
.++++++|+|||+||++|+.+.|.++++++.+++ ++.|+.||++++ .+++ ++|+|.++||+++|++|+. +..+.|
T Consensus 40 ~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~-~v~~~~vd~d~~-~~l~-~~~~v~~~Pt~~~~~~G~~-~~~~~G- 114 (128)
T 3ul3_B 40 MKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGK-RIYLLKVDLDKN-ESLA-RKFSVKSLPTIILLKNKTM-LARKDH- 114 (128)
T ss_dssp SCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG-GEEEEEEEGGGC-HHHH-HHTTCCSSSEEEEEETTEE-EEEESS-
T ss_pred ccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEECCCC-HHHH-HHcCCCCcCEEEEEECCEE-EEEecC-
Confidence 3789999999999999999999999999999986 799999999999 9999 9999999999999987763 556666
Q ss_pred CCCHHHHHHHHHH
Q 022560 281 RRDVDSLMAFVDA 293 (295)
Q Consensus 281 ~~~~e~l~~fi~~ 293 (295)
..+.++|.++|++
T Consensus 115 ~~~~~~l~~~l~~ 127 (128)
T 3ul3_B 115 FVSSNDLIALIKK 127 (128)
T ss_dssp CCCHHHHHHHHTT
T ss_pred CCCHHHHHHHHHh
Confidence 7999999999975
No 66
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.77 E-value=1.7e-18 Score=140.78 Aligned_cols=102 Identities=9% Similarity=0.209 Sum_probs=87.0
Q ss_pred cCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCCCeEEEE
Q 022560 188 LNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILFF 267 (295)
Q Consensus 188 lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~Pti~~~ 267 (295)
.+.++|++.+. ..++++|||+|||+||++|+.+.|.++++++.+++ .+.|+.||++++ ++++ ++|+|.++||+++|
T Consensus 9 ~~~~~~~~~i~-~~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~-~~~~~~vd~d~~-~~l~-~~~~v~~~Pt~~~~ 84 (149)
T 3gix_A 9 TSKKEVDQAIK-STAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSK-MAAIYLVDVDQT-AVYT-QYFDISYIPSTVFF 84 (149)
T ss_dssp CSHHHHHHHHH-HCCSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTT-TEEEEEEETTTC-CHHH-HHTTCCSSSEEEEE
T ss_pred CCHHHHHHHHH-hcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccC-ceEEEEEECCcC-HHHH-HHcCCCccCeEEEE
Confidence 35678888773 23689999999999999999999999999999977 699999999999 8999 99999999999999
Q ss_pred eCCCCCe---------eecCCCCCCHHHHHHHHHHh
Q 022560 268 PKHSSKP---------IKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 268 ~~g~~~~---------~~~~gg~~~~e~l~~fi~~l 294 (295)
++|+. + ..+.|...+.++|.++|+++
T Consensus 85 ~~G~~-v~~~~g~~~~~~~~G~~~~~~~l~~~l~~~ 119 (149)
T 3gix_A 85 FNGQH-MKVDYGSPDHTKFVGSFKTKQDFIDLIEVI 119 (149)
T ss_dssp ETTEE-EEEECSSSCCSCEESCCSSHHHHHHHHHHH
T ss_pred ECCeE-EEeecCCCCCCeEeeecCCHHHHHHHHHHH
Confidence 99873 2 23444257899999999865
No 67
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.77 E-value=1.7e-18 Score=132.93 Aligned_cols=101 Identities=15% Similarity=0.249 Sum_probs=87.2
Q ss_pred CceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCCCe
Q 022560 184 NLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPT 263 (295)
Q Consensus 184 ~v~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~Pt 263 (295)
.+..++.++| +.+. ++++++|+||++||++|+.+.|.++++++.+.+ +.|+.||++++ .+++ ++|+|.++||
T Consensus 4 ~~~~~~~~~f-~~~~---~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~~--v~~~~vd~~~~-~~l~-~~~~v~~~Pt 75 (110)
T 2l6c_A 4 IRDITTEAGM-AHFE---GLSDAIVFFHKNLCPHCKNMEKVLDKFGARAPQ--VAISSVDSEAR-PELM-KELGFERVPT 75 (110)
T ss_dssp CSBCGGGCSH-HHHT---TCSEEEEEEECSSCSTHHHHHHHHHHHHTTCTT--SCEEEEEGGGC-HHHH-HHTTCCSSCE
T ss_pred eeecCCHHHH-HHHH---cCCCEEEEEECCCCHhHHHHHHHHHHHHHHCCC--cEEEEEcCcCC-HHHH-HHcCCcccCE
Confidence 3556788999 5554 679999999999999999999999999988764 99999999998 9999 9999999999
Q ss_pred EEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 264 ILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 264 i~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
+++|++|+. +..+.| ..+.++|.++|++.
T Consensus 76 ~~~~~~G~~-v~~~~G-~~~~~~l~~~~~~~ 104 (110)
T 2l6c_A 76 LVFIRDGKV-AKVFSG-IMNPRELQALYASI 104 (110)
T ss_dssp EEEEESSSE-EEEEES-CCCHHHHHHHHHTC
T ss_pred EEEEECCEE-EEEEcC-CCCHHHHHHHHHHH
Confidence 999988774 555666 78999999999764
No 68
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.77 E-value=3.4e-19 Score=140.04 Aligned_cols=106 Identities=24% Similarity=0.391 Sum_probs=87.4
Q ss_pred CCCceecCcccHHHHHhhcCCCCcEEEEEECCCCh--------------hHHHHHHHHHHHHHHhcCCCeEEEEEEcCCC
Q 022560 182 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQ--------------FCQAMEGSYVELADKLAGNGVKVGKFRADGD 247 (295)
Q Consensus 182 ~~~v~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~--------------~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~ 247 (295)
++.|+++++++|++.+ .+++++++|+|||+||+ +|+.+.|.++++++.+++ ++.|++||++++
T Consensus 2 ~~~v~~l~~~~f~~~~--~~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~-~~~~~~vd~d~~ 78 (123)
T 1oaz_A 2 SDKIIHLTDDSFDTDV--LKADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQG-KLTVAKLNIDQN 78 (123)
T ss_dssp CCSCEECCSTTHHHHT--TSCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC--------CEEEEEETTSC
T ss_pred CCccEecChhhHHHHH--HhCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcC-CeEEEEEECCCC
Confidence 3568899999998755 24789999999999999 999999999999999987 699999999999
Q ss_pred cHHHHHHhcCCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 248 QKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 248 ~~~l~~~~~~V~~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
.+++ ++|+|.++||+++|++|+. +..+.| ..+.++|.++|+++
T Consensus 79 -~~l~-~~~~v~~~Pt~~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 121 (123)
T 1oaz_A 79 -PGTA-PKYGIRGIPTLLLFKNGEV-AATKVG-ALSKGQLKEFLDAN 121 (123)
T ss_dssp -TTTG-GGGTCCBSSEEEEEESSSE-EEEEES-CCCHHHHHHHHTTT
T ss_pred -HHHH-HHcCCCccCEEEEEECCEE-EEEEeC-CCCHHHHHHHHHHH
Confidence 8999 9999999999999988763 445666 78999999999875
No 69
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.77 E-value=5.1e-18 Score=163.48 Aligned_cols=108 Identities=19% Similarity=0.498 Sum_probs=98.0
Q ss_pred CCCCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCC
Q 022560 181 NSQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGS 260 (295)
Q Consensus 181 ~~~~v~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~ 260 (295)
..+.|+.|++++|++++. ++++|||+|||+||++|+.+.|.|+++++.+++.++.|++|||+.+ ..++ ++|+|.+
T Consensus 12 ~~~~v~~l~~~~f~~~~~---~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~~v~~~~vd~~~~-~~l~-~~~~v~~ 86 (504)
T 2b5e_A 12 EDSAVVKLATDSFNEYIQ---SHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTEN-QDLC-MEHNIPG 86 (504)
T ss_dssp TTSSCEECCTTTHHHHHT---TCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTTCEEEEEETTTC-HHHH-HHTTCCS
T ss_pred CCCCcEECCHHHHHHHHh---cCCeEEEEEECCCCHHHHHhHHHHHHHHHHhccCCeEEEEEECCCC-HHHH-HhcCCCc
Confidence 346799999999999885 7899999999999999999999999999999874599999999999 9999 9999999
Q ss_pred CCeEEEEeCCCCC-eeecCCCCCCHHHHHHHHHHh
Q 022560 261 FPTILFFPKHSSK-PIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 261 ~Pti~~~~~g~~~-~~~~~gg~~~~e~l~~fi~~l 294 (295)
+||+++|++|+.. +..|.| .++.+.|.+||.+.
T Consensus 87 ~Pt~~~~~~g~~~~~~~~~G-~~~~~~l~~~l~~~ 120 (504)
T 2b5e_A 87 FPSLKIFKNSDVNNSIDYEG-PRTAEAIVQFMIKQ 120 (504)
T ss_dssp SSEEEEEETTCTTCEEECCS-CCSHHHHHHHHHHH
T ss_pred CCEEEEEeCCccccceeecC-CCCHHHHHHHHHHh
Confidence 9999999998743 678888 79999999999864
No 70
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.77 E-value=5.5e-18 Score=127.63 Aligned_cols=102 Identities=20% Similarity=0.394 Sum_probs=87.5
Q ss_pred ceecCc-ccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCCCe
Q 022560 185 LVTLNR-TGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPT 263 (295)
Q Consensus 185 v~~lt~-~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~Pt 263 (295)
|..+++ ++|++.+. ..++++++|+||++||++|+.+.|.+.++++.+++ +.|+.||++++ ++++ ++|+|.++||
T Consensus 1 v~~i~~~~~~~~~l~-~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~v~~~~~-~~~~-~~~~v~~~Pt 75 (104)
T 2vim_A 1 MRVLATAADLEKLIN-ENKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIPE--VEFAKVDVDQN-EEAA-AKYSVTAMPT 75 (104)
T ss_dssp CEECCSHHHHHHHHH-TTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTTC-HHHH-HHTTCCSSSE
T ss_pred CeecCCHHHHHHHHH-hcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCCC--CEEEEEeccCC-HHHH-HHcCCccccE
Confidence 345666 88988775 23688999999999999999999999999999864 99999999999 8999 9999999999
Q ss_pred EEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 264 ILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 264 i~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
+++|++|+. ...+.| .+.++|.++|+++
T Consensus 76 ~~~~~~g~~-~~~~~G--~~~~~l~~~l~~~ 103 (104)
T 2vim_A 76 FVFIKDGKE-VDRFSG--ANETKLRETITRH 103 (104)
T ss_dssp EEEEETTEE-EEEEES--SCHHHHHHHHHHH
T ss_pred EEEEeCCcE-EEEEeC--CCHHHHHHHHHhh
Confidence 999998763 444555 5899999999876
No 71
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.77 E-value=3.2e-18 Score=136.93 Aligned_cols=104 Identities=23% Similarity=0.345 Sum_probs=78.1
Q ss_pred CCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCCC
Q 022560 183 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 262 (295)
Q Consensus 183 ~~v~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~P 262 (295)
+.+.+++.++|...+. ..++ +||+||++||++|+.+.|.|+++++.+++ ++.|+.||++++ .+++ ++|+|.++|
T Consensus 33 ~~v~~l~~~~~~~~~~--~~~~-vvv~f~~~~C~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~~-~~l~-~~~~v~~~P 106 (140)
T 1v98_A 33 PWVVEADEKGFAQEVA--GAPL-TLVDFFAPWCGPCRLVSPILEELARDHAG-RLKVVKVNVDEH-PGLA-ARYGVRSVP 106 (140)
T ss_dssp ------------------CCCE-EEEEEECTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETTTC-HHHH-HHTTCCSSS
T ss_pred CccccCCHHHHHHHHH--cCCC-EEEEEECCCCHHHHHHHHHHHHHHHHccC-ceEEEEEECCCC-HHHH-HHCCCCccC
Confidence 4578899999998765 2344 99999999999999999999999999987 699999999999 8999 999999999
Q ss_pred eEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 263 TILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 263 ti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
|+++|++|+. ...+.| ..+.++|.+||+++
T Consensus 107 t~~~~~~G~~-~~~~~G-~~~~~~l~~~i~~~ 136 (140)
T 1v98_A 107 TLVLFRRGAP-VATWVG-ASPRRVLEERLRPY 136 (140)
T ss_dssp EEEEEETTEE-EEEEES-CCCHHHHHHHHHHH
T ss_pred EEEEEeCCcE-EEEEeC-CCCHHHHHHHHHHH
Confidence 9999988763 455666 78999999999875
No 72
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.76 E-value=2.1e-18 Score=133.61 Aligned_cols=102 Identities=20% Similarity=0.343 Sum_probs=86.8
Q ss_pred CCceecCc-ccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCC
Q 022560 183 QNLVTLNR-TGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSF 261 (295)
Q Consensus 183 ~~v~~lt~-~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~ 261 (295)
+.+..+++ ++|+++++ +++++||+||++||++|+.+.|.|+++++.+++ +.|+.||++++ .+++ ++|+|.++
T Consensus 12 ~~~~~~~~~~~~~~~~~---~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~--v~~~~vd~~~~-~~l~-~~~~v~~~ 84 (114)
T 2oe3_A 12 TSITKLTNLTEFRNLIK---QNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD--VRFVKCDVDES-PDIA-KECEVTAM 84 (114)
T ss_dssp GGSCBCCSHHHHHHHHH---HCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT--SEEEEEETTTC-HHHH-HHTTCCSB
T ss_pred hheeecCCHHHHHHHHh---CCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--CEEEEEECCCC-HHHH-HHCCCCcc
Confidence 34555555 66777765 789999999999999999999999999999877 99999999999 8999 99999999
Q ss_pred CeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 262 PTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 262 Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
||+++|++|+. +..+.| .. .++|.++|+++
T Consensus 85 Pt~~~~~~G~~-~~~~~G-~~-~~~l~~~l~~~ 114 (114)
T 2oe3_A 85 PTFVLGKDGQL-IGKIIG-AN-PTALEKGIKDL 114 (114)
T ss_dssp SEEEEEETTEE-EEEEES-SC-HHHHHHHHHTC
T ss_pred cEEEEEeCCeE-EEEEeC-CC-HHHHHHHHHhC
Confidence 99999988763 455666 45 99999999864
No 73
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.76 E-value=2.8e-18 Score=148.26 Aligned_cols=107 Identities=23% Similarity=0.386 Sum_probs=94.9
Q ss_pred CCCCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCC
Q 022560 181 NSQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGS 260 (295)
Q Consensus 181 ~~~~v~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~ 260 (295)
....+..+|+++|++.+. ++++++||+|||+||++|+.+.|.|+++++.+++ .+.|+.||++.+ ..++ ++|+|.+
T Consensus 10 ~~~~~~~lt~~~f~~~v~--~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~-~v~~~~vd~d~~-~~l~-~~~~v~~ 84 (222)
T 3dxb_A 10 MSDKIIHLTDDSFDTDVL--KADGAILVDFWAEWCGPCKMIAPILDEIADEYQG-KLTVAKLNIDQN-PGTA-PKYGIRG 84 (222)
T ss_dssp CSCCCEECCTTTHHHHHT--TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTC-TTTG-GGGTCCS
T ss_pred CCCCceeCCHHHHHHHHH--hcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcC-CcEEEEEECCCC-HHHH-HHcCCCc
Confidence 346788999999998542 4789999999999999999999999999999988 699999999999 8999 9999999
Q ss_pred CCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 261 FPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 261 ~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
+||+++|++|+. +..+.| ..+.++|.+||+++
T Consensus 85 ~Pt~~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 116 (222)
T 3dxb_A 85 IPTLLLFKNGEV-AATKVG-ALSKGQLKEFLDAN 116 (222)
T ss_dssp BSEEEEEETTEE-EEEEES-CCCHHHHHHHHHHH
T ss_pred CCEEEEEECCeE-EEEecc-ccChHHHHHHHHhh
Confidence 999999998764 456666 78999999999875
No 74
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.76 E-value=2.1e-18 Score=160.79 Aligned_cols=106 Identities=22% Similarity=0.484 Sum_probs=92.0
Q ss_pred CCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcC-----CCeEEEEEEcCCCcHHHHHHhcC
Q 022560 183 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAG-----NGVKVGKFRADGDQKEYAKQKLQ 257 (295)
Q Consensus 183 ~~v~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~-----~~v~~~~vd~~~~~~~l~~~~~~ 257 (295)
+.|+.|++++|+.++. ++++|||+|||+||++|+.+.|.|+++++.+++ ..+.|++|||+.+ .+++ ++|+
T Consensus 5 ~~v~~l~~~~f~~~~~---~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~-~~l~-~~~~ 79 (382)
T 2r2j_A 5 SEITSLDTENIDEILN---NADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQH-SDIA-QRYR 79 (382)
T ss_dssp ---CBCCTTTHHHHHH---HCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTC-HHHH-HHTT
T ss_pred CceEECCHHHHHHHHh---cCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCcc-HHHH-HhcC
Confidence 4588999999999876 689999999999999999999999999999852 2599999999999 9999 9999
Q ss_pred CCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 258 LGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 258 V~~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
|.++||+++|++|+.....|.| .++.+.|.+||.++
T Consensus 80 v~~~Pt~~~f~~G~~~~~~~~G-~~~~~~l~~~i~~~ 115 (382)
T 2r2j_A 80 ISKYPTLKLFRNGMMMKREYRG-QRSVKALADYIRQQ 115 (382)
T ss_dssp CCEESEEEEEETTEEEEEECCS-CCSHHHHHHHHHHH
T ss_pred CCcCCEEEEEeCCcEeeeeecC-cchHHHHHHHHHHh
Confidence 9999999999998742225887 79999999999864
No 75
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.76 E-value=2e-19 Score=143.57 Aligned_cols=104 Identities=16% Similarity=0.424 Sum_probs=86.7
Q ss_pred CCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCC---
Q 022560 183 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLG--- 259 (295)
Q Consensus 183 ~~v~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~--- 259 (295)
..|..++.++|++++. ..++++|||+|||+||++|+.+.|.|+++++.+.+.++.|+.||++++ .+++ ++|+|.
T Consensus 7 ~~v~~l~~~~f~~~~~-~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~-~~~~-~~~~v~~~~ 83 (137)
T 2dj0_A 7 GYIKYFNDKTIDEELE-RDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRY-TDVS-TRYKVSTSP 83 (137)
T ss_dssp SCCEECCTTHHHHHHH-HSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTTC-HHHH-HHTTCCCCS
T ss_pred ceEEEccHhhHHHHHh-cCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCccC-HHHH-HHccCcccC
Confidence 4688999999999885 344569999999999999999999999999999865699999999999 9999 999999
Q ss_pred ---CCCeEEEEeCCCCCeeecCCCCCCHHHHHHHH
Q 022560 260 ---SFPTILFFPKHSSKPIKYPSERRDVDSLMAFV 291 (295)
Q Consensus 260 ---~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi 291 (295)
++||+++|++|+. +..+.| ..+.++|.+||
T Consensus 84 ~~~~~Pt~~~~~~G~~-~~~~~G-~~~~~~l~~~l 116 (137)
T 2dj0_A 84 LTKQLPTLILFQGGKE-AMRRPQ-IDKKGRAVSWT 116 (137)
T ss_dssp SSSCSSEEEEESSSSE-EEEESC-BCSSSCBCCCC
T ss_pred CcCCCCEEEEEECCEE-EEEecC-cCchHHHHHHH
Confidence 9999999988774 444555 45555554443
No 76
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.76 E-value=4.8e-18 Score=138.27 Aligned_cols=104 Identities=27% Similarity=0.424 Sum_probs=88.6
Q ss_pred CCceecC-cccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCC
Q 022560 183 QNLVTLN-RTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSF 261 (295)
Q Consensus 183 ~~v~~lt-~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~ 261 (295)
+.+..++ .++|++++.. ..++++||+||++||++|+.+.|.|+++++.+++ +.|+.||++++ .+++ ++|+|.++
T Consensus 12 ~~v~~l~~~~~~~~~~~~-~~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~--v~~~~vd~~~~-~~l~-~~~~v~~~ 86 (153)
T 2wz9_A 12 AAVEEVGSAGQFEELLRL-KAKSLLVVHFWAPWAPQCAQMNEVMAELAKELPQ--VSFVKLEAEGV-PEVS-EKYEISSV 86 (153)
T ss_dssp CCSEEECSHHHHHHHHHH-TTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTTS-HHHH-HHTTCCSS
T ss_pred CCeEEcCCHHHHHHHHHh-cCCCeEEEEEECCCCHhHHHHHHHHHHHHHHcCC--eEEEEEECCCC-HHHH-HHcCCCCC
Confidence 5677886 5889988862 2389999999999999999999999999999854 99999999999 8999 99999999
Q ss_pred CeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 262 PTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 262 Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
||+++|++|+. +..+.| .+.++|.++|+++
T Consensus 87 Pt~~~~~~G~~-~~~~~G--~~~~~l~~~i~~~ 116 (153)
T 2wz9_A 87 PTFLFFKNSQK-IDRLDG--AHAPELTKKVQRH 116 (153)
T ss_dssp SEEEEEETTEE-EEEEES--SCHHHHHHHHHHH
T ss_pred CEEEEEECCEE-EEEEeC--CCHHHHHHHHHHH
Confidence 99999997763 344555 5788999999875
No 77
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.75 E-value=4.5e-18 Score=135.77 Aligned_cols=104 Identities=14% Similarity=0.137 Sum_probs=86.6
Q ss_pred CCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCCC
Q 022560 183 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 262 (295)
Q Consensus 183 ~~v~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~P 262 (295)
+.|.+++.++|.+.+.....+++|||+|||+||++|+.+.|.|+++++.+.+ +.|+.||+++. . ++|+|.++|
T Consensus 10 g~v~~i~~~~~~~~v~~~~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~~--v~~~~vd~~~~-~----~~~~i~~~P 82 (135)
T 2dbc_A 10 GELREISGNQYVNEVTNAEKDLWVVIHLYRSSVPMCLVVNQHLSVLARKFPE--TKFVKAIVNSC-I----EHYHDNCLP 82 (135)
T ss_dssp CSCEECCHHHHHHHTTTCCSSCEEEEEECCTTCHHHHHHHHHHHHHHHHCSS--EEEEEECCSSS-C----SSCCSSCCS
T ss_pred CceEEcCHHHHHHHHHhcCCCCEEEEEEECCCChHHHHHHHHHHHHHHHCCC--cEEEEEEhhcC-c----ccCCCCCCC
Confidence 5688899999999876333457999999999999999999999999999865 99999999987 2 689999999
Q ss_pred eEEEEeCCCCCeeecCCC------CCCHHHHHHHHHHh
Q 022560 263 TILFFPKHSSKPIKYPSE------RRDVDSLMAFVDAL 294 (295)
Q Consensus 263 ti~~~~~g~~~~~~~~gg------~~~~e~l~~fi~~l 294 (295)
|+++|++|+. +..+.|. ..+.++|.++|.+.
T Consensus 83 t~~~~~~G~~-v~~~~G~~~~~~~~~~~~~l~~~l~~~ 119 (135)
T 2dbc_A 83 TIFVYKNGQI-EGKFIGIIECGGINLKLEELEWKLSEV 119 (135)
T ss_dssp EEEEESSSSC-SEEEESTTTTTCTTCCHHHHHHHHHHH
T ss_pred EEEEEECCEE-EEEEEeEEeeCCCcCCHHHHHHHHHHc
Confidence 9999998874 4444442 13789999999864
No 78
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.75 E-value=1.9e-18 Score=134.04 Aligned_cols=102 Identities=8% Similarity=0.213 Sum_probs=83.3
Q ss_pred CCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCC-----cHHHHHHhcC
Q 022560 183 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD-----QKEYAKQKLQ 257 (295)
Q Consensus 183 ~~v~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~-----~~~l~~~~~~ 257 (295)
..+..++.++|.+.+. ++++++|+|||+||++|+.+.|.+.++++.+.. .+.++ |++.. ...++ ++|+
T Consensus 12 ~~~~~~~~~~~~~~~~---~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~-~v~~~--~~~~~~~~~~~~~~~-~~~~ 84 (118)
T 1zma_A 12 KDLEVTTVVRAQEALD---KKETATFFIGRKTCPYCRKFAGTLSGVVAETKA-HIYFI--NSEEPSQLNDLQAFR-SRYG 84 (118)
T ss_dssp TTSEECCHHHHHHHHH---TTCCEEEEEECTTCHHHHHHHHHHHHHHHHHCC-CCEEE--ETTCGGGHHHHHHHH-HHHT
T ss_pred hhhhcCCHHHHHHHHh---CCCeEEEEEECCCCccHHHHHHHHHHHHHhcCC-eEEEE--ECCCcCcHHHHHHHH-HHcC
Confidence 4567788999998876 688999999999999999999999999998865 45555 44332 15788 8999
Q ss_pred CCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHH
Q 022560 258 LGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDA 293 (295)
Q Consensus 258 V~~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~ 293 (295)
|.++||+++|++|+. +..+.| ..+.++|.+||++
T Consensus 85 i~~~Pt~~~~~~G~~-~~~~~G-~~~~~~l~~~l~k 118 (118)
T 1zma_A 85 IPTVPGFVHITDGQI-NVRCDS-SMSAQEIKDFAGL 118 (118)
T ss_dssp CCSSCEEEEEETTEE-EEECCT-TCCHHHHHHHHTC
T ss_pred CCCCCeEEEEECCEE-EEEecC-CCCHHHHHHHhhC
Confidence 999999999998874 456666 7899999999863
No 79
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.75 E-value=1.6e-17 Score=145.30 Aligned_cols=108 Identities=19% Similarity=0.424 Sum_probs=91.7
Q ss_pred CCCCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcC--CCeEEEEEEc--CCCcHHHHHHhc
Q 022560 181 NSQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAG--NGVKVGKFRA--DGDQKEYAKQKL 256 (295)
Q Consensus 181 ~~~~v~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~--~~v~~~~vd~--~~~~~~l~~~~~ 256 (295)
.+..|.++++++|++.+. +++++++|+|||+||++|+.+.|.|+++++.+++ ..+.|+.||+ +++ .+++ ++|
T Consensus 10 ~~~~v~~l~~~~f~~~i~--~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~-~~l~-~~~ 85 (244)
T 3q6o_A 10 PSDPLTLLQADTVRGAVL--GSRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETN-SAVC-RDF 85 (244)
T ss_dssp TTSSSEEECTTTHHHHHS--SCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTT-HHHH-HHT
T ss_pred CCCCceeCChhhHHHHHh--hCCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhh-HHHH-HHc
Confidence 456799999999999774 4679999999999999999999999999999986 4799999999 556 8999 999
Q ss_pred CCCCCCeEEEEeCCCCC----eeecCCCCCCHHHHHHHHHHh
Q 022560 257 QLGSFPTILFFPKHSSK----PIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 257 ~V~~~Pti~~~~~g~~~----~~~~~gg~~~~e~l~~fi~~l 294 (295)
+|.++||+++|++|++. .+.+.| .+.+.|.++|.++
T Consensus 86 ~v~~~Pt~~~~~~g~~~~~g~~~~~~g--~~~~~l~~~i~~~ 125 (244)
T 3q6o_A 86 NIPGFPTVRFFXAFTXNGSGAVFPVAG--ADVQTLRERLIDA 125 (244)
T ss_dssp TCCSSSEEEEECTTCCSSSCEECCCTT--CCHHHHHHHHHHH
T ss_pred CCCccCEEEEEeCCCcCCCCeeEecCC--CCHHHHHHHHHHH
Confidence 99999999999986531 233433 6999999998764
No 80
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.75 E-value=3.3e-18 Score=157.58 Aligned_cols=105 Identities=12% Similarity=0.182 Sum_probs=95.1
Q ss_pred CCCCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHH-------HHHHHHHhcCCCeEEEEEEcCCCcHHHHH
Q 022560 181 NSQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGS-------YVELADKLAGNGVKVGKFRADGDQKEYAK 253 (295)
Q Consensus 181 ~~~~v~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~-------~~~la~~~~~~~v~~~~vd~~~~~~~l~~ 253 (295)
..+.|++|++++|++++. ++++|+|+||||||+ |+.+.|. |+++++.+++.++.|++|||+++ .++|
T Consensus 9 ~~~~v~~l~~~~f~~~i~---~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~~~-~~l~- 82 (350)
T 1sji_A 9 GKDRVVSLTEKNFKQVLK---KYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAKKE-AKLA- 82 (350)
T ss_dssp CCCCCEEECHHHHHHHHT---TCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETTTT-HHHH-
T ss_pred CCCccEECCHHHHHHHHh---hCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCCCC-HHHH-
Confidence 446799999999999886 689999999999999 9999888 89999999875699999999999 9999
Q ss_pred HhcCCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 254 QKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 254 ~~~~V~~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
++|+|+++||+++|++|+ +..|.| .++.+.|.+||.++
T Consensus 83 ~~~~v~~~Pt~~~~~~g~--~~~~~G-~~~~~~l~~~i~~~ 120 (350)
T 1sji_A 83 KKLGFDEEGSLYVLKGDR--TIEFDG-EFAADVLVEFLLDL 120 (350)
T ss_dssp HHHTCCSTTEEEEEETTE--EEEECS-CCCHHHHHHHHHTT
T ss_pred HhcCCCccceEEEEECCc--EEEecC-CCCHHHHHHHHHHh
Confidence 999999999999999987 678988 79999999999864
No 81
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.75 E-value=3e-18 Score=133.82 Aligned_cols=104 Identities=18% Similarity=0.358 Sum_probs=89.8
Q ss_pred CCceecCc-ccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCC
Q 022560 183 QNLVTLNR-TGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSF 261 (295)
Q Consensus 183 ~~v~~lt~-~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~ 261 (295)
..+..+++ ++|++++. +++++||+||++||++|+.+.|.|+++++.+++.++.|+.||++++ .+++ ++|+|.++
T Consensus 15 ~~~~~i~~~~~f~~~l~---~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~~-~~~~-~~~~v~~~ 89 (121)
T 2j23_A 15 GSVQVISSYDQFKQVTG---GDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQ-SQIA-QEVGIRAM 89 (121)
T ss_dssp CCEEECCSHHHHHHHHS---SSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTTC-HHHH-HHHTCCSS
T ss_pred cceEEcCCHHHHHHHHc---CCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcCC-HHHH-HHcCCCcc
Confidence 45666655 88988874 7899999999999999999999999999888763499999999999 8999 99999999
Q ss_pred CeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 262 PTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 262 Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
||+++|++|+. +..+.| . +.++|.++|+++
T Consensus 90 Pt~~~~~~G~~-~~~~~G-~-~~~~l~~~l~~~ 119 (121)
T 2j23_A 90 PTFVFFKNGQK-IDTVVG-A-DPSKLQAAITQH 119 (121)
T ss_dssp SEEEEEETTEE-EEEEES-S-CHHHHHHHHHHH
T ss_pred cEEEEEECCeE-EeeEcC-C-CHHHHHHHHHHh
Confidence 99999988763 455666 5 999999999876
No 82
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.75 E-value=3.9e-18 Score=133.73 Aligned_cols=105 Identities=13% Similarity=0.237 Sum_probs=85.6
Q ss_pred ceecCcccHH--HHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEE--cCCCcHHHHHHhcCCCC
Q 022560 185 LVTLNRTGME--NLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFR--ADGDQKEYAKQKLQLGS 260 (295)
Q Consensus 185 v~~lt~~~f~--~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd--~~~~~~~l~~~~~~V~~ 260 (295)
+..++..+|+ +.+....+++++||+||++||++|+.+.|.+.++++.+++ ++.|+.|| ++++ .+++ ++|+|.+
T Consensus 6 ~~~l~~~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~-~v~~~~v~~~~d~~-~~~~-~~~~v~~ 82 (126)
T 2l57_A 6 IKQINFQSINVVENLEEAKEGIPTIIMFKTDTCPYCVEMQKELSYVSKEREG-KFNIYYARLEEEKN-IDLA-YKYDANI 82 (126)
T ss_dssp SSCTTTTCCSEESSTTTCCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSSS-SCEEEEEETTSSHH-HHHH-HHTTCCS
T ss_pred cCCCCccccchhHHHHHHhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhcC-CeEEEEEeCCCCch-HHHH-HHcCCcc
Confidence 4445555554 1112234789999999999999999999999999999975 79999999 8888 8999 9999999
Q ss_pred CCeEEEEe-CCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 261 FPTILFFP-KHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 261 ~Pti~~~~-~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
+||+++|+ +|+ ....+.| ..+.++|.++|+++
T Consensus 83 ~Pt~~~~~~~G~-~~~~~~G-~~~~~~l~~~l~~~ 115 (126)
T 2l57_A 83 VPTTVFLDKEGN-KFYVHQG-LMRKNNIETILNSL 115 (126)
T ss_dssp SSEEEEECTTCC-EEEEEES-CCCHHHHHHHHHHH
T ss_pred eeEEEEECCCCC-EEEEecC-CCCHHHHHHHHHHH
Confidence 99999999 555 3555666 78999999999875
No 83
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.75 E-value=6.7e-18 Score=129.23 Aligned_cols=105 Identities=22% Similarity=0.300 Sum_probs=89.0
Q ss_pred CCceec-CcccHHHHHhhc-CCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCC
Q 022560 183 QNLVTL-NRTGMENLARLD-HRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGS 260 (295)
Q Consensus 183 ~~v~~l-t~~~f~~~i~~~-~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~ 260 (295)
+.++.+ +.++|++.+... .++++++|+||++||++|+.+.|.++++++.+.+ +.|+.||++++ .+++ ++|+|.+
T Consensus 4 ~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--v~~~~v~~~~~-~~~~-~~~~v~~ 79 (113)
T 1ti3_A 4 GQVIACHTVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFPN--VTFLKVDVDEL-KAVA-EEWNVEA 79 (113)
T ss_dssp CCEEEECSHHHHHHHHHHHTTSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCSS--EEEEEEETTTC-HHHH-HHHHCSS
T ss_pred CceeEeccHHHHHHHHHHhhhcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCCC--cEEEEEEcccc-HHHH-HhCCCCc
Confidence 457777 568999888642 2588999999999999999999999999999875 99999999998 8999 9999999
Q ss_pred CCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 261 FPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 261 ~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
+||+++|++|+. +..+.| .+.++|.++|+++
T Consensus 80 ~Pt~~~~~~G~~-~~~~~g--~~~~~l~~~l~~~ 110 (113)
T 1ti3_A 80 MPTFIFLKDGKL-VDKTVG--ADKDGLPTLVAKH 110 (113)
T ss_dssp TTEEEEEETTEE-EEEEEC--CCTTHHHHHHHHH
T ss_pred ccEEEEEeCCEE-EEEEec--CCHHHHHHHHHHh
Confidence 999999988763 344444 5788999999875
No 84
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.75 E-value=1.3e-17 Score=129.84 Aligned_cols=104 Identities=20% Similarity=0.347 Sum_probs=86.3
Q ss_pred CCceec--CcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCC
Q 022560 183 QNLVTL--NRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGS 260 (295)
Q Consensus 183 ~~v~~l--t~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~ 260 (295)
+.|..+ +..+|.+.+. ++++++||+||++||++|+.+.|.|.++++.+ . ++.|+.||++++ .+++ ++|+|.+
T Consensus 3 ~~v~~~~g~~~~~~~~~~--~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~-~-~v~~~~vd~~~~-~~~~-~~~~i~~ 76 (118)
T 2f51_A 3 DPIVHFNGTHEALLNRIK--EAPGLVLVDFFATWCGPCQRLGQILPSIAEAN-K-DVTFIKVDVDKN-GNAA-DAYGVSS 76 (118)
T ss_dssp CCSEEECSCHHHHHHHHH--HCSSCEEEEEECTTCHHHHHHHHHHHHHHHHC-T-TSEEEEEETTTC-HHHH-HHTTCCS
T ss_pred CcceEecCCHHHHHHHHH--hCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC-C-CeEEEEEECCCC-HHHH-HhcCCCC
Confidence 457777 4678885442 26899999999999999999999999999999 3 699999999999 9999 9999999
Q ss_pred CCeEEEEeC----CCCCeeecCCCCCCHHHHHHHHHHhC
Q 022560 261 FPTILFFPK----HSSKPIKYPSERRDVDSLMAFVDALR 295 (295)
Q Consensus 261 ~Pti~~~~~----g~~~~~~~~gg~~~~e~l~~fi~~l~ 295 (295)
+||+++|++ |+. +..+.| ...++|.+.|++++
T Consensus 77 ~Pt~~~~~~~~~~G~~-~~~~~G--~~~~~l~~~~~~~~ 112 (118)
T 2f51_A 77 IPALFFVKKEGNEIKT-LDQFVG--ADVSRIKADIEKFK 112 (118)
T ss_dssp SSEEEEEEEETTEEEE-EEEEES--CCHHHHHHHHHHHC
T ss_pred CCEEEEEeCCCCcceE-EEeecC--CCHHHHHHHHHHhh
Confidence 999999987 552 455655 45677999998753
No 85
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.75 E-value=2.5e-18 Score=137.02 Aligned_cols=102 Identities=12% Similarity=0.187 Sum_probs=89.4
Q ss_pred CCCCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEc---------CCCcHHH
Q 022560 181 NSQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRA---------DGDQKEY 251 (295)
Q Consensus 181 ~~~~v~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~---------~~~~~~l 251 (295)
.++.++.++.++|++.+. . +++|+|||+||++|+.+.|.|+++++.++ +.|+.||+ +++ .++
T Consensus 14 ~~~~v~~l~~~~~~~~~~---~--~vlv~F~a~wC~~C~~~~p~l~~l~~~~~---v~~~~vd~~~~~~~~~~d~~-~~l 84 (135)
T 3emx_A 14 EDGRLIYITPEEFRQLLQ---G--DAILAVYSKTCPHCHRDWPQLIQASKEVD---VPIVMFIWGSLIGERELSAA-RLE 84 (135)
T ss_dssp ETTEEEECCHHHHHHHHT---S--SEEEEEEETTCHHHHHHHHHHHHHHTTCC---SCEEEEEECTTCCHHHHHHH-HHH
T ss_pred ccCceeecCHHHHHHHhC---C--cEEEEEECCcCHhhhHhChhHHHHHHHCC---CEEEEEECCCchhhhhhhhh-HHH
Confidence 346789999999999885 3 99999999999999999999999998874 89999999 666 889
Q ss_pred HHHhcCCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 252 AKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 252 ~~~~~~V~~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
+ ++|+|.++||+++|++|+. +..+.| ..+.+.+.++++++
T Consensus 85 ~-~~~~v~~~Pt~~~~~~G~~-v~~~~G-~~~~~~~~~~i~~~ 124 (135)
T 3emx_A 85 M-NKAGVEGTPTLVFYKEGRI-VDKLVG-ATPWSLKVEKAREI 124 (135)
T ss_dssp H-HHHTCCSSSEEEEEETTEE-EEEEES-CCCHHHHHHHHHHH
T ss_pred H-HHcCCceeCeEEEEcCCEE-EEEEeC-CCCHHHHHHHHHHH
Confidence 9 9999999999999998763 556666 79999999999876
No 86
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.75 E-value=6.6e-18 Score=136.12 Aligned_cols=101 Identities=13% Similarity=0.186 Sum_probs=83.7
Q ss_pred CcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCCCeEEEEe
Q 022560 189 NRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILFFP 268 (295)
Q Consensus 189 t~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~Pti~~~~ 268 (295)
+.++|+..+. ..++++|+|+|||+||++|+.+.|.++++++.+.+ ++.|+.||++++ .+++ ++|+|.++||+++|+
T Consensus 10 ~~~~~~~~v~-~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-~v~~~~vd~d~~-~~~~-~~~~i~~~Pt~~~~~ 85 (142)
T 1qgv_A 10 NGWQVDQAIL-SEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKN-FAVIYLVDITEV-PDFN-KMYELYDPCTVMFFF 85 (142)
T ss_dssp SHHHHHHHHH-TCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTT-TEEEEEEETTTC-CTTT-TSSCSCSSCEEEEEE
T ss_pred CHHHHHHHHH-hcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC-CeEEEEEccccC-HHHH-HHcCCCCCCEEEEEE
Confidence 4678887664 12589999999999999999999999999999977 699999999998 8999 999999999999999
Q ss_pred CCCCCee--------ecCCCCC-CHHHHHHHHHHh
Q 022560 269 KHSSKPI--------KYPSERR-DVDSLMAFVDAL 294 (295)
Q Consensus 269 ~g~~~~~--------~~~gg~~-~~e~l~~fi~~l 294 (295)
+|+.... ...| .. +.++|.++|+++
T Consensus 86 ~G~~v~~~~g~~~~~~~~g-~~~~~~~l~~~i~~~ 119 (142)
T 1qgv_A 86 RNKHIMIDLGTGNNNKINW-AMEDKQEMVDIIETV 119 (142)
T ss_dssp TTEEEEEECC------CCS-CCSCHHHHHHHHHHH
T ss_pred CCcEEEEecCCCCcceeee-ecCcHHHHHHHHHHH
Confidence 8874221 2344 34 489999998864
No 87
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.75 E-value=9e-18 Score=133.90 Aligned_cols=106 Identities=14% Similarity=0.239 Sum_probs=89.3
Q ss_pred CCCceecC-cccHHHHHhhc-CCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCC
Q 022560 182 SQNLVTLN-RTGMENLARLD-HRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLG 259 (295)
Q Consensus 182 ~~~v~~lt-~~~f~~~i~~~-~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~ 259 (295)
...++.++ .++|++.+... .+++++||+||++||++|+.+.|.++++++.+.+ +.|+.||++++ .+++ ++|+|.
T Consensus 23 ~~~~~~i~~~~~~~~~~~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~~--v~~~~v~~~~~-~~~~-~~~~v~ 98 (139)
T 3d22_A 23 GGNVHLITTKERWDQKLSEASRDGKIVLANFSARWCGPSRQIAPYYIELSENYPS--LMFLVIDVDEL-SDFS-ASWEIK 98 (139)
T ss_dssp CTTCEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTTS-HHHH-HHTTCC
T ss_pred CCcEEEeCCHHHHHHHHHHHhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--CEEEEEeCccc-HHHH-HHcCCC
Confidence 34566664 68999887532 3588999999999999999999999999999854 99999999999 9999 999999
Q ss_pred CCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 260 SFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 260 ~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
++||+++|++|+. ...+.| . +.++|.++|+++
T Consensus 99 ~~Pt~~~~~~G~~-~~~~~G-~-~~~~l~~~l~~~ 130 (139)
T 3d22_A 99 ATPTFFFLRDGQQ-VDKLVG-A-NKPELHKKITAI 130 (139)
T ss_dssp EESEEEEEETTEE-EEEEES-C-CHHHHHHHHHHH
T ss_pred cccEEEEEcCCeE-EEEEeC-C-CHHHHHHHHHHH
Confidence 9999999987763 445556 4 889999999864
No 88
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.74 E-value=3.3e-18 Score=136.16 Aligned_cols=106 Identities=9% Similarity=0.209 Sum_probs=88.1
Q ss_pred CCCCceecCc-ccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCC
Q 022560 181 NSQNLVTLNR-TGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLG 259 (295)
Q Consensus 181 ~~~~v~~lt~-~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~ 259 (295)
..+.++++++ ++|++++. ...++++||+|||+||++|+.+.|.|+++++.+ ++.|+.||++++ .+++ ++|+|.
T Consensus 18 ~~~~v~~l~~~~~~~~~l~-~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~---~v~~~~vd~~~~-~~l~-~~~~v~ 91 (133)
T 3cxg_A 18 GQSIYIELKNTGSLNQVFS-STQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY---YVTLVDIDVDIH-PKLN-DQHNIK 91 (133)
T ss_dssp TTEEEEECCCTTHHHHHHT-C-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE---ECEEEEEETTTC-HHHH-HHTTCC
T ss_pred CCccEEEecChhHHHHHHH-hcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc---CEEEEEEeccch-HHHH-HhcCCC
Confidence 3456788876 88888775 234689999999999999999999999988776 489999999999 8999 999999
Q ss_pred CCCeEEEEe--CCCC-CeeecCCCCCCHHHHHHHHHHh
Q 022560 260 SFPTILFFP--KHSS-KPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 260 ~~Pti~~~~--~g~~-~~~~~~gg~~~~e~l~~fi~~l 294 (295)
++||+++|+ +|+. .+..+.| . +.++|.++|+++
T Consensus 92 ~~Pt~~~~~~~~g~g~~~~~~~G-~-~~~~l~~~l~~~ 127 (133)
T 3cxg_A 92 ALPTFEFYFNLNNEWVLVHTVEG-A-NQNDIEKAFQKY 127 (133)
T ss_dssp SSSEEEEEEEETTEEEEEEEEES-C-CHHHHHHHHHHH
T ss_pred CCCEEEEEEecCCCeEEEEEEcC-C-CHHHHHHHHHHH
Confidence 999999996 6652 2455666 4 899999999875
No 89
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.74 E-value=1.8e-17 Score=127.83 Aligned_cols=105 Identities=18% Similarity=0.300 Sum_probs=89.0
Q ss_pred CCceec-CcccHHHHHhhc-CCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCC
Q 022560 183 QNLVTL-NRTGMENLARLD-HRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGS 260 (295)
Q Consensus 183 ~~v~~l-t~~~f~~~i~~~-~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~ 260 (295)
+.++.+ +.++|++.+... ..+++++|+||++||++|+.+.|.++++++.+++ +.|+.||++++ .+++ ++|+|.+
T Consensus 6 ~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~v~~~~~-~~~~-~~~~v~~ 81 (118)
T 2vm1_A 6 GAVIACHTKQEFDTHMANGKDTGKLVIIDFTASWCGPCRVIAPVFAEYAKKFPG--AIFLKVDVDEL-KDVA-EAYNVEA 81 (118)
T ss_dssp CCEEECCSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTTS-HHHH-HHTTCCS
T ss_pred CceEEecCHHHHHHHHHhcccCCCEEEEEEECCCCHhHHHHhHHHHHHHHHCCC--cEEEEEEcccC-HHHH-HHcCCCc
Confidence 457777 568999887632 2478999999999999999999999999999875 99999999998 8999 9999999
Q ss_pred CCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 261 FPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 261 ~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
+||+++|++|+. +..+.| .+.++|.++|+++
T Consensus 82 ~Pt~~~~~~g~~-~~~~~g--~~~~~l~~~l~~~ 112 (118)
T 2vm1_A 82 MPTFLFIKDGEK-VDSVVG--GRKDDIHTKIVAL 112 (118)
T ss_dssp BSEEEEEETTEE-EEEEES--CCHHHHHHHHHHH
T ss_pred CcEEEEEeCCeE-EEEecC--CCHHHHHHHHHHH
Confidence 999999988773 344555 5889999999874
No 90
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.74 E-value=1.1e-17 Score=160.06 Aligned_cols=106 Identities=20% Similarity=0.395 Sum_probs=95.6
Q ss_pred CceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCCCe
Q 022560 184 NLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPT 263 (295)
Q Consensus 184 ~v~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~Pt 263 (295)
.|+.|++++|++++.....+++|+|+|||+||++|+.+.|.|+++++.+++ .+.|++|||+++ ..++ ++|+|.++||
T Consensus 2 ~v~~l~~~~f~~~i~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~-~v~~~~vd~~~~-~~l~-~~~~v~~~Pt 78 (481)
T 3f8u_A 2 DVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHAKRLAPEYEAAATRLKG-IVPLAKVDCTAN-TNTC-NKYGVSGYPT 78 (481)
T ss_dssp CCEEECTTTHHHHTTCCSSSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCCEEEEETTTC-HHHH-HHTTCCEESE
T ss_pred ceEEecHHHHHHHHHhCCCCCeEEEEEECCCCHHHHHhHHHHHHHHHHhcC-ceEEEEEECCCC-HHHH-HhcCCCCCCE
Confidence 588999999999886222349999999999999999999999999999988 599999999999 9999 9999999999
Q ss_pred EEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 264 ILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 264 i~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
+++|++|+. +..|.| .++.+.|.+||.+.
T Consensus 79 l~~~~~g~~-~~~~~G-~~~~~~l~~~~~~~ 107 (481)
T 3f8u_A 79 LKIFRDGEE-AGAYDG-PRTADGIVSHLKKQ 107 (481)
T ss_dssp EEEEETTEE-EEECCS-CSSHHHHHHHHHHH
T ss_pred EEEEeCCce-eeeecC-ccCHHHHHHHHHhh
Confidence 999998864 678888 79999999999864
No 91
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.73 E-value=1.8e-17 Score=143.75 Aligned_cols=104 Identities=21% Similarity=0.525 Sum_probs=94.3
Q ss_pred CCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcC--CCeEEEEEEcCCCcHHHHHHhcCCCC
Q 022560 183 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAG--NGVKVGKFRADGDQKEYAKQKLQLGS 260 (295)
Q Consensus 183 ~~v~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~--~~v~~~~vd~~~~~~~l~~~~~~V~~ 260 (295)
..+..++.++|++++. .+++++|+|||+||++|+.+.|.+.++++.+.+ ..+.|+.||++++ .+++ ++|+|.+
T Consensus 130 ~~~~~~~~~~~~~~~~---~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~~-~~l~-~~~~v~~ 204 (241)
T 3idv_A 130 EVTLVLTKENFDEVVN---DADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAE-TDLA-KRFDVSG 204 (241)
T ss_dssp CSSEECCTTTHHHHHH---HCSEEEEEEECTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTTC-HHHH-HHTTCCS
T ss_pred ccceeccHHHHHHhhc---cCCeEEEEEECCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCCC-HHHH-HHcCCcc
Confidence 4578899999999886 678999999999999999999999999999976 2499999999999 9999 9999999
Q ss_pred CCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 261 FPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 261 ~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
+||+++|++|+ .+.|.| .++.++|.+||.+.
T Consensus 205 ~Pt~~~~~~g~--~~~~~g-~~~~~~l~~~l~~~ 235 (241)
T 3idv_A 205 YPTLKIFRKGR--PYDYNG-PREKYGIVDYMIEQ 235 (241)
T ss_dssp SSEEEEEETTE--EEECCS-CCSHHHHHHHHHHH
T ss_pred cCEEEEEECCe--EEEecC-CCCHHHHHHHHHhh
Confidence 99999999987 566887 79999999999864
No 92
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.73 E-value=3.3e-18 Score=138.12 Aligned_cols=102 Identities=10% Similarity=0.135 Sum_probs=77.2
Q ss_pred CceecCcccHHHHHhhcCCCCcEEEEEECCC--ChhHHHHHHHHHHHHHHhcCCCeE--EEEEEcCCCcHHHHHHhcCCC
Q 022560 184 NLVTLNRTGMENLARLDHRQEPWLVVLYAPW--CQFCQAMEGSYVELADKLAGNGVK--VGKFRADGDQKEYAKQKLQLG 259 (295)
Q Consensus 184 ~v~~lt~~~f~~~i~~~~~~k~vvV~Fya~w--C~~C~~~~p~~~~la~~~~~~~v~--~~~vd~~~~~~~l~~~~~~V~ 259 (295)
.+..+++++|++++. +.+.++|+|+++| |++|+.+.|.|++++++| + ++. |++||++++ ++++ ++|+|.
T Consensus 18 ~~~~l~~~~f~~~i~---~~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~-~v~~~~~~Vd~d~~-~~la-~~~~V~ 90 (142)
T 2es7_A 18 GWQPVEASTVDDWIK---RVGDGVILLSSDPRRTPEVSDNPVMIAELLREF-P-QFDWQVAVADLEQS-EAIG-DRFNVR 90 (142)
T ss_dssp TCEECCCC-----------CCSEEEEECCCSCC----CCHHHHHHHHHHTC-T-TSCCEEEEECHHHH-HHHH-HTTTCC
T ss_pred cCcccccccHHHHHH---hCCCEEEEEECCCCCCccHHHHHHHHHHHHHHh-c-ccceeEEEEECCCC-HHHH-HhcCCC
Confidence 678899999999885 5667999999987 999999999999999999 5 688 999999998 9999 999999
Q ss_pred CCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 260 SFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 260 ~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
++||+++|++|+. +..+.| ..+.++|.++|+++
T Consensus 91 ~iPT~~~fk~G~~-v~~~~G-~~~~~~l~~~i~~~ 123 (142)
T 2es7_A 91 RFPATLVFTDGKL-RGALSG-IHPWAELLTLMRSI 123 (142)
T ss_dssp SSSEEEEESCC-----CEES-CCCHHHHHHHHHHH
T ss_pred cCCeEEEEeCCEE-EEEEeC-CCCHHHHHHHHHHH
Confidence 9999999988764 555666 78999999999864
No 93
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.71 E-value=7.2e-17 Score=148.80 Aligned_cols=107 Identities=23% Similarity=0.549 Sum_probs=94.4
Q ss_pred CCCCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcC-CCeEEEEEEcCCCcHHHHHHhcCCC
Q 022560 181 NSQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAG-NGVKVGKFRADGDQKEYAKQKLQLG 259 (295)
Q Consensus 181 ~~~~v~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~-~~v~~~~vd~~~~~~~l~~~~~~V~ 259 (295)
....|..+++++|++++. +++++++|+|||+||++|+.+.|.|.++++.+++ .++.|+.||++.+ . + .+|+|.
T Consensus 247 ~~~~v~~l~~~~f~~~~~--~~~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~~~-~--~-~~~~v~ 320 (361)
T 3uem_A 247 DKQPVKVLVGKNFEDVAF--DEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTAN-E--V-EAVKVH 320 (361)
T ss_dssp TTSSSEEECTTTHHHHHT--CTTCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTTC-B--C-SSCCCC
T ss_pred ccCCcEEeecCchhhhcc--cCCCcEEEEEecCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECCcc-c--h-hhcCCc
Confidence 456789999999999873 4789999999999999999999999999999987 3699999999998 4 6 899999
Q ss_pred CCCeEEEEeCC-CCCeeecCCCCCCHHHHHHHHHHh
Q 022560 260 SFPTILFFPKH-SSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 260 ~~Pti~~~~~g-~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
++||+++|++| +..+..|.| .++.++|.+||++.
T Consensus 321 ~~Pt~~~~~~~~~~~~~~~~G-~~~~~~l~~~l~~~ 355 (361)
T 3uem_A 321 SFPTLKFFPASADRTVIDYNG-ERTLDGFKKFLESG 355 (361)
T ss_dssp SSSEEEEECSSSSCCCEECCS-CSSHHHHHHHHTTT
T ss_pred ccCeEEEEECCCCcceeEecC-CCCHHHHHHHHHhc
Confidence 99999999766 445788988 79999999999764
No 94
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=99.70 E-value=1.9e-16 Score=139.02 Aligned_cols=102 Identities=17% Similarity=0.322 Sum_probs=90.2
Q ss_pred CCCceecCcccHHHHHhhcCCCCcEEEEEE--CCCChhHHHHHHHHHHHHHHhcC--CCeEEEEEEcCC-----CcHHHH
Q 022560 182 SQNLVTLNRTGMENLARLDHRQEPWLVVLY--APWCQFCQAMEGSYVELADKLAG--NGVKVGKFRADG-----DQKEYA 252 (295)
Q Consensus 182 ~~~v~~lt~~~f~~~i~~~~~~k~vvV~Fy--a~wC~~C~~~~p~~~~la~~~~~--~~v~~~~vd~~~-----~~~~l~ 252 (295)
.+.|+.|++.+|++++. ++++|||+|| ||||+ +.|.|+++++.+.+ .++.|++|||++ + +++|
T Consensus 15 ~~~v~~Lt~~nF~~vi~---~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n-~~la 86 (248)
T 2c0g_A 15 CTGCVDLDELSFEKTVE---RFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKDYGELEN-KALG 86 (248)
T ss_dssp CTTCEECCTTTHHHHHT---TSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTT-HHHH
T ss_pred CCCcEECCHHHHHHHHh---cCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCccccccc-HHHH
Confidence 35688999999999775 7889999999 99998 99999999999853 379999999998 6 8999
Q ss_pred HHhcCCC--CCCeEEEEeCCC-CCeeec--CCCCCCHHHHHHHHHHh
Q 022560 253 KQKLQLG--SFPTILFFPKHS-SKPIKY--PSERRDVDSLMAFVDAL 294 (295)
Q Consensus 253 ~~~~~V~--~~Pti~~~~~g~-~~~~~~--~gg~~~~e~l~~fi~~l 294 (295)
++|+|+ ++||+++|+ |. ..+..| .| .++.++|.+||++.
T Consensus 87 -~~~~V~~~~~PTl~~F~-G~~~~~~~y~~~G-~~~~~~L~~fi~~~ 130 (248)
T 2c0g_A 87 -DRYKVDDKNFPSIFLFK-GNADEYVQLPSHV-DVTLDNLKAFVSAN 130 (248)
T ss_dssp -HHTTCCTTSCCEEEEES-SSSSSEEECCTTS-CCCHHHHHHHHHHH
T ss_pred -HHhCCCcCCCCeEEEEe-CCcCcceeecccC-CCCHHHHHHHHHHh
Confidence 999999 999999999 87 346778 77 79999999999864
No 95
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.69 E-value=1.1e-16 Score=127.24 Aligned_cols=100 Identities=20% Similarity=0.343 Sum_probs=82.6
Q ss_pred CcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHH---HHHHHHhcCCCeEEEEEEcC----CCcHHHHHHhcCCCCC
Q 022560 189 NRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSY---VELADKLAGNGVKVGKFRAD----GDQKEYAKQKLQLGSF 261 (295)
Q Consensus 189 t~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~---~~la~~~~~~~v~~~~vd~~----~~~~~l~~~~~~V~~~ 261 (295)
+.++|...+... +++++||+||++||++|+.+.|.+ .++++.+++ +.|+.||++ .+ ..++ ++|+|.++
T Consensus 18 ~~~~~~~~l~~~-~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~~--~~~~~vd~~~~~~~~-~~l~-~~~~v~~~ 92 (134)
T 2fwh_A 18 TVDELNQALVEA-KGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALAD--TVLLQANVTANDAQD-VALL-KHLNVLGL 92 (134)
T ss_dssp SHHHHHHHHHHH-TTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTTT--SEEEEEECTTCCHHH-HHHH-HHTTCCSS
T ss_pred CHHHHHHHHHHh-cCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC--cEEEEEeCCCCcchH-HHHH-HHcCCCCC
Confidence 456777766522 489999999999999999999999 899998876 999999995 34 7889 99999999
Q ss_pred CeEEEE-eCCCCCe--eecCCCCCCHHHHHHHHHHhC
Q 022560 262 PTILFF-PKHSSKP--IKYPSERRDVDSLMAFVDALR 295 (295)
Q Consensus 262 Pti~~~-~~g~~~~--~~~~gg~~~~e~l~~fi~~l~ 295 (295)
||+++| .+|+. + ..+.| ..+.++|.++|++++
T Consensus 93 Pt~~~~d~~G~~-v~~~~~~G-~~~~~~l~~~l~~~~ 127 (134)
T 2fwh_A 93 PTILFFDGQGQE-HPQARVTG-FMDAETFSAHLRDRQ 127 (134)
T ss_dssp SEEEEECTTSCB-CGGGCBCS-CCCHHHHHHHHHHC-
T ss_pred CEEEEECCCCCE-eeeeeeee-ccCHHHHHHHHHhcC
Confidence 999999 55552 3 46777 789999999998753
No 96
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.69 E-value=6.9e-17 Score=127.02 Aligned_cols=107 Identities=15% Similarity=0.245 Sum_probs=86.3
Q ss_pred ceecCcccHHHHHhhc-CCCCcEEEEEECCCChhHHHHHHHH---HHHHHHhcCCCeEEEEEEcCC-CcHHHHHHhcCCC
Q 022560 185 LVTLNRTGMENLARLD-HRQEPWLVVLYAPWCQFCQAMEGSY---VELADKLAGNGVKVGKFRADG-DQKEYAKQKLQLG 259 (295)
Q Consensus 185 v~~lt~~~f~~~i~~~-~~~k~vvV~Fya~wC~~C~~~~p~~---~~la~~~~~~~v~~~~vd~~~-~~~~l~~~~~~V~ 259 (295)
.+.++..+|.+.+... .+++++||+||++||++|+.+.|.+ .++++.+.. .+.++.||++. ....++ ++|+|.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~-~~~~v~ 85 (130)
T 2kuc_A 8 GIAFRELSFPEALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNR-HFVNLKMDMEKGEGVELR-KKYGVH 85 (130)
T ss_dssp CCCCBCCCHHHHHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHH-HSEEEEECSSSTTHHHHH-HHTTCC
T ss_pred CCCcccCCHHHHHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhc-CeEEEEEecCCcchHHHH-HHcCCC
Confidence 4556788888876432 3588999999999999999999999 777777765 68999999984 227899 999999
Q ss_pred CCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 260 SFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 260 ~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
++||+++|+.+++.+..+.| ..+.++|.++|+++
T Consensus 86 ~~Pt~~~~d~~G~~~~~~~G-~~~~~~l~~~l~~~ 119 (130)
T 2kuc_A 86 AYPTLLFINSSGEVVYRLVG-AEDAPELLKKVKLG 119 (130)
T ss_dssp SSCEEEEECTTSCEEEEEES-CCCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCcEEEEecC-CCCHHHHHHHHHHH
Confidence 99999999543333556666 68999999999875
No 97
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.69 E-value=2e-16 Score=152.92 Aligned_cols=109 Identities=17% Similarity=0.364 Sum_probs=93.2
Q ss_pred CCCCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcC--CCeEEEEEEcCC--CcHHHHHHhc
Q 022560 181 NSQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAG--NGVKVGKFRADG--DQKEYAKQKL 256 (295)
Q Consensus 181 ~~~~v~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~--~~v~~~~vd~~~--~~~~l~~~~~ 256 (295)
.+..|.++++++|+..+. +.+++|||+|||+||++|+.+.|.|+++++.+++ ..+.|+.||++. + .+++ ++|
T Consensus 10 ~~~~V~~Lt~~~f~~~v~--~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~-~~l~-~~~ 85 (519)
T 3t58_A 10 SSDPLTLLDADSVRPTVL--GSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETN-SAVC-REF 85 (519)
T ss_dssp TTSSSEEECTTTHHHHHS--SCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGG-HHHH-HHT
T ss_pred CCCCcEECChHHHHHHHH--hCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCcccc-HHHH-HHc
Confidence 456799999999999773 4679999999999999999999999999999986 469999999964 5 8999 999
Q ss_pred CCCCCCeEEEEeCCCC---CeeecCCCCCCHHHHHHHHHHh
Q 022560 257 QLGSFPTILFFPKHSS---KPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 257 ~V~~~Pti~~~~~g~~---~~~~~~gg~~~~e~l~~fi~~l 294 (295)
+|.++||+++|++|++ ....+.| ..+.++|.++|.++
T Consensus 86 ~V~~~PTl~~f~~g~~~G~~~~~~~g-~~~~~~L~~~l~~~ 125 (519)
T 3t58_A 86 NIAGFPTVRFFQAFTKNGSGATLPGA-GANVQTLRMRLIDA 125 (519)
T ss_dssp TCCSBSEEEEECTTCCSCCCEEECCS-SCCHHHHHHHHHHH
T ss_pred CCcccCEEEEEcCcccCCCceeEecC-CCCHHHHHHHHHHH
Confidence 9999999999996442 3455666 58999999999764
No 98
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.69 E-value=1.3e-16 Score=126.22 Aligned_cols=101 Identities=18% Similarity=0.294 Sum_probs=81.8
Q ss_pred ccHHHHHhh-cCCCCcEEEEEECCCChhHHHHHHHHH--HHHHHhcCCCeEEEEEEc---CCCcHHHHHHhcCC---CCC
Q 022560 191 TGMENLARL-DHRQEPWLVVLYAPWCQFCQAMEGSYV--ELADKLAGNGVKVGKFRA---DGDQKEYAKQKLQL---GSF 261 (295)
Q Consensus 191 ~~f~~~i~~-~~~~k~vvV~Fya~wC~~C~~~~p~~~--~la~~~~~~~v~~~~vd~---~~~~~~l~~~~~~V---~~~ 261 (295)
.+|++.+.. ..++++|||+||++||++|+.+.|.|. ++++.+.+ ++.|+.||+ +.+ .+++ ++|+| .++
T Consensus 16 ~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~-~~~~~~vd~~~~~~~-~~l~-~~~~v~~~~~~ 92 (133)
T 3fk8_A 16 TQVKKALAAGKRTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAK-HFEVVKIDVGNFDRN-LELS-QAYGDPIQDGI 92 (133)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHH-HCEEEEEECTTTTSS-HHHH-HHTTCGGGGCS
T ss_pred hHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcC-CEEEEEEeCCcccch-HHHH-HHhCCccCCcc
Confidence 445554432 236899999999999999999999999 99999866 699999999 777 8999 99999 999
Q ss_pred CeEEEEeCCCCCeeecCCC------CCCHHHHHHHHHHh
Q 022560 262 PTILFFPKHSSKPIKYPSE------RRDVDSLMAFVDAL 294 (295)
Q Consensus 262 Pti~~~~~g~~~~~~~~gg------~~~~e~l~~fi~~l 294 (295)
||+++|+.+++.+..+.|+ ..+.++|.+||+++
T Consensus 93 Pt~~~~d~~G~~~~~~~g~~~~~~~~~~~~~l~~~l~~l 131 (133)
T 3fk8_A 93 PAVVVVNSDGKVRYTTKGGELANARKMSDQGIYDFFAKI 131 (133)
T ss_dssp SEEEEECTTSCEEEECCSCTTTTGGGSCHHHHHHHHHHH
T ss_pred ceEEEECCCCCEEEEecCCcccccccCCHHHHHHHHHHh
Confidence 9999994433334444442 47899999999886
No 99
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=99.51 E-value=2e-18 Score=130.08 Aligned_cols=104 Identities=25% Similarity=0.429 Sum_probs=90.0
Q ss_pred CceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCCCe
Q 022560 184 NLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPT 263 (295)
Q Consensus 184 ~v~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~Pt 263 (295)
.|.+++.++|.+.+. .++++++|+||++||++|+.+.|.+.++++.+.+ ++.|+.||++++ .+++ ++|+|.++||
T Consensus 2 ~v~~l~~~~~~~~~~--~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~-~~~~-~~~~v~~~Pt 76 (106)
T 2yj7_A 2 SVIEVTDENFEQEVL--KSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEG-KVKVVKVNVDEN-PNTA-AQYGIRSIPT 76 (106)
Confidence 367789999987552 4688999999999999999999999999999986 699999999998 8999 9999999999
Q ss_pred EEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 264 ILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 264 i~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
+++|++|+. ...+.| ..+.++|.++|+++
T Consensus 77 ~~~~~~g~~-~~~~~g-~~~~~~l~~~l~~~ 105 (106)
T 2yj7_A 77 LLLFKNGQV-VDRLVG-AQPKEALKERIDKH 105 (106)
Confidence 999977763 455666 68899999999875
No 100
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.68 E-value=1.6e-16 Score=136.70 Aligned_cols=104 Identities=11% Similarity=0.143 Sum_probs=88.9
Q ss_pred CceecCcccHHHHHhhcCCCCcE-EEEEECCCChhHHHHHHHHHHHHHHhcC---CCeEEEEEEcCCCcHHHHHHhcCCC
Q 022560 184 NLVTLNRTGMENLARLDHRQEPW-LVVLYAPWCQFCQAMEGSYVELADKLAG---NGVKVGKFRADGDQKEYAKQKLQLG 259 (295)
Q Consensus 184 ~v~~lt~~~f~~~i~~~~~~k~v-vV~Fya~wC~~C~~~~p~~~~la~~~~~---~~v~~~~vd~~~~~~~l~~~~~~V~ 259 (295)
.+..+++++|+.+.. .++++ +|+|||+||++|+.+.|.++++++.+.+ .++.|+.||++++ .+++ ++|+|.
T Consensus 117 ~~~~l~~~~~~~~~~---~~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~~~-~~l~-~~~~v~ 191 (226)
T 1a8l_A 117 EETNLMDETKQAIRN---IDQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIEY-PEWA-DQYNVM 191 (226)
T ss_dssp TCCCCCHHHHHHHTT---CCSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGGC-HHHH-HHTTCC
T ss_pred CCCCCCHHHHHHHHh---cCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEcccC-HHHH-HhCCCc
Confidence 345678888887654 56666 9999999999999999999999999971 2699999999998 8999 999999
Q ss_pred CCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 260 SFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 260 ~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
++||+++|++|+. ...+.| ..+.++|.++|+++
T Consensus 192 ~~Pt~~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 224 (226)
T 1a8l_A 192 AVPKIVIQVNGED-RVEFEG-AYPEKMFLEKLLSA 224 (226)
T ss_dssp SSCEEEEEETTEE-EEEEES-CCCHHHHHHHHHHH
T ss_pred ccCeEEEEeCCce-eEEEcC-CCCHHHHHHHHHHh
Confidence 9999999998864 556777 78999999999875
No 101
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=99.68 E-value=3.8e-16 Score=136.63 Aligned_cols=102 Identities=17% Similarity=0.362 Sum_probs=90.7
Q ss_pred CCceecCcccHHHHHhhcCCCCcEEEEEEC--CCChhHHHHHHHHHHHHHHhcC-CCeEEEEEEcCC-----CcHHHHHH
Q 022560 183 QNLVTLNRTGMENLARLDHRQEPWLVVLYA--PWCQFCQAMEGSYVELADKLAG-NGVKVGKFRADG-----DQKEYAKQ 254 (295)
Q Consensus 183 ~~v~~lt~~~f~~~i~~~~~~k~vvV~Fya--~wC~~C~~~~p~~~~la~~~~~-~~v~~~~vd~~~-----~~~~l~~~ 254 (295)
+.|+.|++.+|++++. .+++|||+||| |||+ +.|.|+++++.+.+ .++.|++||+++ + +++| +
T Consensus 5 ~~v~~Lt~~nF~~~i~---~~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~-~~l~-~ 75 (240)
T 2qc7_A 5 KGALPLDTVTFYKVIP---KSKFVLVKFDTQYPYGE----KQDEFKRLAENSASSDDLLVAEVGISDYGDKLN-MELS-E 75 (240)
T ss_dssp TTCEECCTTHHHHHGG---GCSEEEEEECCSSCCSH----HHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCS-HHHH-H
T ss_pred CCceECCHHHHHHHHc---CCCCEEEEEeCCCCCCc----chHHHHHHHHHhcCCCCeEEEEEeCCcccchhh-HHHH-H
Confidence 5688999999999775 67899999999 9999 99999999999975 479999999554 6 8999 9
Q ss_pred hcCCC--CCCeEEEEeCCC-CCeeecCCCCCCHHHHHHHHHHh
Q 022560 255 KLQLG--SFPTILFFPKHS-SKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 255 ~~~V~--~~Pti~~~~~g~-~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
+|+|. ++||+++|++|+ ..+..|.| .++.++|.+||++.
T Consensus 76 ~~~V~~~~~PTl~~f~~G~~~~~~~y~G-~~~~~~L~~fi~~~ 117 (240)
T 2qc7_A 76 KYKLDKESYPVFYLFRDGDFENPVPYTG-AVKVGAIQRWLKGQ 117 (240)
T ss_dssp HTTCCGGGCSEEEEEETTCSSCCEECCS-CSCHHHHHHHHHHT
T ss_pred HcCCCCCCCCEEEEEeCCCcCcceeecC-CCCHHHHHHHHHHh
Confidence 99999 999999999998 45778887 79999999999864
No 102
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.68 E-value=1.2e-16 Score=125.27 Aligned_cols=102 Identities=12% Similarity=0.233 Sum_probs=85.6
Q ss_pred ceecCcccHHHHHhhcCCCCcEEEEEECC-------CChhHHHHHHHHHHHHHHhcCCCeEEEEEEc-------CCCcHH
Q 022560 185 LVTLNRTGMENLARLDHRQEPWLVVLYAP-------WCQFCQAMEGSYVELADKLAGNGVKVGKFRA-------DGDQKE 250 (295)
Q Consensus 185 v~~lt~~~f~~~i~~~~~~k~vvV~Fya~-------wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~-------~~~~~~ 250 (295)
+...+.++|.+.+.. .++++++|+|||+ ||++|+.+.|.|.++++.+.+ ++.|+.||+ +.+ ..
T Consensus 7 v~~~~~~~~~~~~~~-~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~-~~~~~~vd~~~~~~~~d~~-~~ 83 (123)
T 1wou_A 7 VSVSGFEEFHRAVEQ-HNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISE-GCVFIYCQVGEKPYWKDPN-ND 83 (123)
T ss_dssp EEEESHHHHHHHHHT-TTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCT-TEEEEEEECCCHHHHHCTT-CH
T ss_pred EEeccHHHHHHHHHH-hCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCC-CcEEEEEECCCchhhhchh-HH
Confidence 455677899888761 1489999999999 999999999999999999876 799999999 666 88
Q ss_pred HHHHhcCCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHH
Q 022560 251 YAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDA 293 (295)
Q Consensus 251 l~~~~~~V~~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~ 293 (295)
++ ++|+|.++||+++|++++. ...+.+ .+.+.|.+||++
T Consensus 84 ~~-~~~~i~~~Pt~~~~~~~~~-~~g~~~--~~~~~l~~~i~~ 122 (123)
T 1wou_A 84 FR-KNLKVTAVPTLLKYGTPQK-LVESEC--LQANLVEMLFSE 122 (123)
T ss_dssp HH-HHHCCCSSSEEEETTSSCE-EEGGGG--GCHHHHHHHHHC
T ss_pred HH-HHCCCCeeCEEEEEcCCce-Eecccc--CCHHHHHHHHhc
Confidence 99 8999999999999988653 444443 678999999875
No 103
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.68 E-value=3.2e-17 Score=141.52 Aligned_cols=105 Identities=17% Similarity=0.240 Sum_probs=88.6
Q ss_pred CCceec-CcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCC
Q 022560 183 QNLVTL-NRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSF 261 (295)
Q Consensus 183 ~~v~~l-t~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~ 261 (295)
+.|..+ +.++|.+++.....+++|||+||++||++|+.+.|.|.++++.|.+ +.|++||++ + +.++ .+|+|.++
T Consensus 99 g~v~~i~~~~~f~~~v~~~~~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~~--v~f~~vd~~-~-~~l~-~~~~i~~~ 173 (217)
T 2trc_P 99 GFVYELETGEQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYPM--VKFCKIRAS-N-TGAG-DRFSSDVL 173 (217)
T ss_dssp CSEEECCSHHHHHHHHHHSCTTCEEEEEEECTTSTTHHHHHHHHHHHHTTCTT--SEEEEEEHH-H-HTCS-TTSCGGGC
T ss_pred CeEEEcCCHHHHHHHHHhcCCCcEEEEEEECCCCccHHHHHHHHHHHHHHCCC--eEEEEEECC-c-HHHH-HHCCCCCC
Confidence 457888 8899999886444568999999999999999999999999999865 999999999 5 7888 89999999
Q ss_pred CeEEEEeCCCCCeeecCCCCCC-------HHHHHHHHHHh
Q 022560 262 PTILFFPKHSSKPIKYPSERRD-------VDSLMAFVDAL 294 (295)
Q Consensus 262 Pti~~~~~g~~~~~~~~gg~~~-------~e~l~~fi~~l 294 (295)
||+++|++|+. +..+.| ..+ .++|..||.++
T Consensus 174 PTl~~~~~G~~-v~~~~G-~~~~~g~~~~~~~Le~~L~~~ 211 (217)
T 2trc_P 174 PTLLVYKGGEL-ISNFIS-VAEQFAEDFFAADVESFLNEY 211 (217)
T ss_dssp SEEEEEETTEE-EEEETT-GGGGSCSSCCHHHHHHHHHTT
T ss_pred CEEEEEECCEE-EEEEeC-CcccCcccCCHHHHHHHHHHc
Confidence 99999998864 445555 343 59999999864
No 104
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=99.67 E-value=2.4e-16 Score=125.33 Aligned_cols=101 Identities=14% Similarity=0.223 Sum_probs=89.3
Q ss_pred CceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCC--C
Q 022560 184 NLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGS--F 261 (295)
Q Consensus 184 ~v~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~--~ 261 (295)
.|.++|.++|++++. .+.+|+|+|||+ |++|+.+.|.|+++|++|++ ++.|++||.+++ +.++ ++|+|++ +
T Consensus 7 lv~~~t~~~f~~~~~---~~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~g-k~~f~~vd~d~~-~~~a-~~~gi~~~~i 79 (133)
T 2djk_A 7 LIGEIGPETYSDYMS---AGIPLAYIFAET-AEERKELSDKLKPIAEAQRG-VINFGTIDAKAF-GAHA-GNLNLKTDKF 79 (133)
T ss_dssp CSEECCHHHHHHHHH---TTSCEEEEECSC-SSSHHHHHHHHHHHHHSSTT-TSEEEEECTTTT-GGGT-TTTTCCSSSS
T ss_pred ceeccChHHHHHHhc---CCCCEEEEEecC-hhhHHHHHHHHHHHHHHhCC-eEEEEEEchHHh-HHHH-HHcCCCcccC
Confidence 478899999998765 788999999999 89999999999999999988 799999999998 8899 9999999 9
Q ss_pred CeEEEEeC--CCCCeeecC--CCCCCHHHHHHHHHHh
Q 022560 262 PTILFFPK--HSSKPIKYP--SERRDVDSLMAFVDAL 294 (295)
Q Consensus 262 Pti~~~~~--g~~~~~~~~--gg~~~~e~l~~fi~~l 294 (295)
||+++|++ |+ ...+. | ..+.++|.+||+++
T Consensus 80 Ptl~i~~~~~g~--~~~~~~~g-~~~~~~l~~fi~~~ 113 (133)
T 2djk_A 80 PAFAIQEVAKNQ--KFPFDQEK-EITFEAIKAFVDDF 113 (133)
T ss_dssp SEEEEECTTTCC--BCCCCSSS-CCCHHHHHHHHHHH
T ss_pred CEEEEEecCcCc--ccCCCCcc-ccCHHHHHHHHHHH
Confidence 99999987 44 34543 5 78999999999864
No 105
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.66 E-value=5.3e-16 Score=148.40 Aligned_cols=108 Identities=24% Similarity=0.580 Sum_probs=95.8
Q ss_pred CCCCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcC-CCeEEEEEEcCCCcHHHHHHhcCCC
Q 022560 181 NSQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAG-NGVKVGKFRADGDQKEYAKQKLQLG 259 (295)
Q Consensus 181 ~~~~v~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~-~~v~~~~vd~~~~~~~l~~~~~~V~ 259 (295)
....|..++.++|++++. +++++|||+|||+||++|+.+.|.|+++++.+++ .++.|+.||++.+ +++ .+|+|.
T Consensus 350 ~~~~v~~~~~~~~~~~~~--~~~k~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~~v~~~~id~~~~--~~~-~~~~v~ 424 (481)
T 3f8u_A 350 NDGPVKVVVAENFDEIVN--NENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATAN--DVP-SPYEVR 424 (481)
T ss_dssp CCSSSEEECTTTHHHHHT--CTTCEEEEEEECTTBHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTSS--CCC-TTCCCC
T ss_pred CCCCeEEecccCHHHHhh--cCCCcEEEEEecCcChhHHHhhHHHHHHHHHhccCCCEEEEEEECCch--hhH-hhCCCc
Confidence 345688899999999875 4589999999999999999999999999999987 3799999999987 677 899999
Q ss_pred CCCeEEEEeCCCCC-eeecCCCCCCHHHHHHHHHHh
Q 022560 260 SFPTILFFPKHSSK-PIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 260 ~~Pti~~~~~g~~~-~~~~~gg~~~~e~l~~fi~~l 294 (295)
++||+++|++|++. +..+.| .++.++|.+||++.
T Consensus 425 ~~Pt~~~~~~~~~~~~~~~~G-~~~~~~l~~~l~~~ 459 (481)
T 3f8u_A 425 GFPTIYFSPANKKLNPKKYEG-GRELSDFISYLQRE 459 (481)
T ss_dssp SSSEEEEECTTCTTSCEECCS-CCSHHHHHHHHHHH
T ss_pred ccCEEEEEeCCCeEeeeEeCC-CCCHHHHHHHHHHh
Confidence 99999999988863 788888 69999999999874
No 106
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.66 E-value=2.1e-16 Score=121.31 Aligned_cols=100 Identities=11% Similarity=0.107 Sum_probs=82.8
Q ss_pred CCceec-CcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHH----HHHHhcC
Q 022560 183 QNLVTL-NRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKE----YAKQKLQ 257 (295)
Q Consensus 183 ~~v~~l-t~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~----l~~~~~~ 257 (295)
.....+ +.++|+++++ ++++++|+|+|+||++|+.+.|.|+++++. . ++.|++||++++ ++ ++ .+|+
T Consensus 6 ~~~~~i~s~e~f~~ii~---~~~~vvi~khatwCgpc~~~~~~~e~~~~~-~--~v~~~~vdVde~-r~~Sn~IA-~~~~ 77 (112)
T 3iv4_A 6 GVAIKLSSIDQFEQVIE---ENKYVFVLKHSETCPISANAYDQFNKFLYE-R--DMDGYYLIVQQE-RDLSDYIA-KKTN 77 (112)
T ss_dssp GCEEECCSHHHHHHHHH---HCSEEEEEEECTTCHHHHHHHHHHHHHHHH-H--TCCEEEEEGGGG-HHHHHHHH-HHHT
T ss_pred cceeecCCHHHHHHHHh---cCCCEEEEEECCcCHhHHHHHHHHHHHhcc-C--CceEEEEEeecC-chhhHHHH-HHhC
Confidence 445666 4578999887 589999999999999999999999999985 3 599999999998 66 78 9999
Q ss_pred CC-CCCeEEEEeCCCCCeeecCCCCCCHHHHHHHH
Q 022560 258 LG-SFPTILFFPKHSSKPIKYPSERRDVDSLMAFV 291 (295)
Q Consensus 258 V~-~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi 291 (295)
|+ ..||+++|++|+..-..-.+ ..+.+.|.+.|
T Consensus 78 V~h~sPq~il~k~G~~v~~~SH~-~I~~~~l~~~~ 111 (112)
T 3iv4_A 78 VKHESPQAFYFVNGEMVWNRDHG-DINVSSLAQAE 111 (112)
T ss_dssp CCCCSSEEEEEETTEEEEEEEGG-GCSHHHHHHHT
T ss_pred CccCCCeEEEEECCEEEEEeecc-ccCHHHHHHhh
Confidence 99 59999999999853333334 68888888765
No 107
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.66 E-value=1.5e-16 Score=139.50 Aligned_cols=106 Identities=17% Similarity=0.229 Sum_probs=87.6
Q ss_pred CCceec-CcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCC
Q 022560 183 QNLVTL-NRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSF 261 (295)
Q Consensus 183 ~~v~~l-t~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~ 261 (295)
+.|..+ +.++|.+++.....+++|||+|||+||++|+.+.|.|.++++.|.+ +.|++||++. ..++ .+|+|.++
T Consensus 112 G~V~ei~s~~~f~~~v~~~~~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~~--v~f~kVd~d~--~~l~-~~~~I~~~ 186 (245)
T 1a0r_P 112 GFVYELESGEQFLETIEKEQKITTIVVHIYEDGIKGCDALNSSLICLAAEYPM--VKFCKIKASN--TGAG-DRFSSDVL 186 (245)
T ss_dssp CSEEECCSHHHHHHHHHSSCTTCEEEEEEECTTSTTHHHHHHHHHHHHHHCTT--SEEEEEEHHH--HCCT-TSSCTTTC
T ss_pred CeEEEeCCHHHHHHHHHHhcCCCEEEEEEECCCChHHHHHHHHHHHHHHHCCC--CEEEEEeCCc--HHHH-HHCCCCCC
Confidence 457888 7899999886334588999999999999999999999999999976 9999999976 4577 89999999
Q ss_pred CeEEEEeCCCCCeeecCC------CCCCHHHHHHHHHHh
Q 022560 262 PTILFFPKHSSKPIKYPS------ERRDVDSLMAFVDAL 294 (295)
Q Consensus 262 Pti~~~~~g~~~~~~~~g------g~~~~e~l~~fi~~l 294 (295)
||+++|++|+. +..+.| ..++.+.|..||.+.
T Consensus 187 PTll~~~~G~~-v~~~vG~~~~~g~~~~~e~Le~~L~~~ 224 (245)
T 1a0r_P 187 PTLLVYKGGEL-LSNFISVTEQLAEEFFTGDVESFLNEY 224 (245)
T ss_dssp SEEEEEETTEE-EEEETTGGGGSCTTCCHHHHHHHHHTT
T ss_pred CEEEEEECCEE-EEEEeCCcccccccccHHHHHHHHHHc
Confidence 99999998863 333333 125788999999764
No 108
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.65 E-value=2.6e-16 Score=159.14 Aligned_cols=106 Identities=22% Similarity=0.484 Sum_probs=89.5
Q ss_pred CCCCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCC
Q 022560 181 NSQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGS 260 (295)
Q Consensus 181 ~~~~v~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~ 260 (295)
....|+.|+.++|++++. ++++|+|+|||+||++|+.+.|.|+++++.+.+ .+.|++|||+++ +++| ++|+|.+
T Consensus 114 ~~~~v~~l~~~~f~~~i~---~~~~~lv~Fya~wC~~C~~~~p~~~~~a~~~~~-~v~~~~vd~~~~-~~l~-~~~~v~~ 187 (780)
T 3apo_A 114 DDPEIITLERREFDAAVN---SGELWFVNFYSPGSSHSHDLAPTWREFAKEVDG-LLRIGAVNCGDD-RMLC-RMKGVNS 187 (780)
T ss_dssp TCTTEEECCHHHHHHHHT---SSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTTC-SSCC--------
T ss_pred CCcceeeechHhHHhhhc---CCCcEEEEEeCCCCcchhHhhHHHHHHHHHhcC-ceEEEEEeCCCc-HHHH-HHcCCce
Confidence 456799999999999885 789999999999999999999999999999988 699999999999 8999 9999999
Q ss_pred CCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 261 FPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 261 ~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
+||+++|++|+. +..|.| .++.+.|.+||.+.
T Consensus 188 ~Pt~~~~~~g~~-~~~~~G-~~~~~~l~~~l~~~ 219 (780)
T 3apo_A 188 YPSLFIFRSGMA-AVKYNG-DRSKESLVAFAMQH 219 (780)
T ss_dssp -CEEEEECTTSC-CEECCS-CSCHHHHHHHHHTT
T ss_pred eeeEEEEeCCcE-eeEecC-CCCHHHHHHHHHHh
Confidence 999999998875 678888 79999999999864
No 109
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.65 E-value=3.1e-16 Score=129.63 Aligned_cols=107 Identities=11% Similarity=0.136 Sum_probs=81.4
Q ss_pred CceecCcccHHHHHhh-cCCCCcEEEEEECCCChhHHHHHHHH---HHHHHHhcCCCeEEEEEEcCCCcHHH--------
Q 022560 184 NLVTLNRTGMENLARL-DHRQEPWLVVLYAPWCQFCQAMEGSY---VELADKLAGNGVKVGKFRADGDQKEY-------- 251 (295)
Q Consensus 184 ~v~~lt~~~f~~~i~~-~~~~k~vvV~Fya~wC~~C~~~~p~~---~~la~~~~~~~v~~~~vd~~~~~~~l-------- 251 (295)
....++..+|++.+.. ..++++|||+|||+||++|+.+.+.+ .++.+.+++ ++.|+.||+++. .++
T Consensus 27 ~~~~~~~~~~~~~~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~-~~~~v~v~~d~~-~~~~~~~~~~~ 104 (172)
T 3f9u_A 27 NEVHAKFDDYDLGMEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINN-DYVLITLYVDNK-TPLTEPVKIME 104 (172)
T ss_dssp -CCCCCBSCHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHH-HCEEEEEETTCC-CEEEEEEEEEE
T ss_pred cccccchhhHHHHHHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC-CEEEEEEecCcc-cccchhhhhhh
Confidence 3455667788877643 24689999999999999999986555 666666665 699999999876 322
Q ss_pred ------------------HHHhcCCCCCCeEEEEeCCCCCeeecCCCCCC-HHHHHHHHHHh
Q 022560 252 ------------------AKQKLQLGSFPTILFFPKHSSKPIKYPSERRD-VDSLMAFVDAL 294 (295)
Q Consensus 252 ------------------~~~~~~V~~~Pti~~~~~g~~~~~~~~gg~~~-~e~l~~fi~~l 294 (295)
. ++|+|.++||+++|+.+++.+..+.| ..+ .++|.++|+++
T Consensus 105 ~~~~~~~~~~~~~~~~~~~-~~~~v~~~Pt~~lid~~G~~~~~~~G-~~~~~~~l~~~l~~~ 164 (172)
T 3f9u_A 105 NGTERTLRTVGDKWSYLQR-VKFGANAQPFYVLIDNEGNPLNKSYA-YDEDISKYINFLQTG 164 (172)
T ss_dssp TTEEEEEEEHHHHHHHHHH-HHHSCCCSSEEEEECTTSCBSSCCBC-SCCCHHHHHHHHHHH
T ss_pred cchhhhhhhhhhhhhHHHH-HHcCCCCcceEEEECCCCCEEeeccC-CCCCHHHHHHHHHHH
Confidence 5 78999999999999654444555666 666 99999998764
No 110
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=99.64 E-value=6.7e-17 Score=153.39 Aligned_cols=96 Identities=16% Similarity=0.349 Sum_probs=81.6
Q ss_pred CCCCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCC-------CeEEEEEEcCCCcHHHHH
Q 022560 181 NSQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGN-------GVKVGKFRADGDQKEYAK 253 (295)
Q Consensus 181 ~~~~v~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~-------~v~~~~vd~~~~~~~l~~ 253 (295)
....|+.++.++|++++. ...+++|||+|||+||++|+.+.|.|+++++.+.+. .+.|++||++++ .+++
T Consensus 21 ~~~~V~~Lt~~~F~~~l~-~~~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~-~~la- 97 (470)
T 3qcp_A 21 LDSSVVDLSGDDFSRVHR-VAPLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASE-VDLC- 97 (470)
T ss_dssp TCTTEEECSCSCGGGTCT-TGGGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTC-HHHH-
T ss_pred CCCCcEECCHHHHHHHHH-hCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCC-HHHH-
Confidence 356799999999998775 234589999999999999999999999999999741 499999999999 9999
Q ss_pred HhcCCCCCCeEEEEeCCC-CCeeecCC
Q 022560 254 QKLQLGSFPTILFFPKHS-SKPIKYPS 279 (295)
Q Consensus 254 ~~~~V~~~Pti~~~~~g~-~~~~~~~g 279 (295)
++|+|.++||+++|++|+ ..+..|.|
T Consensus 98 ~~y~V~~~PTlilf~~gg~~~~~~y~G 124 (470)
T 3qcp_A 98 RKYDINFVPRLFFFYPRDSCRSNEECG 124 (470)
T ss_dssp HHTTCCSSCEEEEEEESSCCCTTSCCC
T ss_pred HHcCCCccCeEEEEECCCceEEEEeeC
Confidence 999999999999997654 33555665
No 111
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.63 E-value=3.3e-17 Score=128.57 Aligned_cols=106 Identities=20% Similarity=0.302 Sum_probs=88.5
Q ss_pred CCCceecC-cccHHHHHhhc-CCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCC
Q 022560 182 SQNLVTLN-RTGMENLARLD-HRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLG 259 (295)
Q Consensus 182 ~~~v~~lt-~~~f~~~i~~~-~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~ 259 (295)
.+.+..++ .++|++.+... .+++++||+||++||++|+.+.|.|.++++.+++ +.|+.||++++ .+++ ++|+|.
T Consensus 13 ~~~~~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--v~~~~v~~~~~-~~~~-~~~~v~ 88 (130)
T 1wmj_A 13 EGVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPG--AVFLKVDVDEL-KEVA-EKYNVE 88 (130)
T ss_dssp CSSSBCCSSSHHHHHHHHHHHTTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCTT--BCCEECCTTTS-GGGH-HHHTCC
T ss_pred CcceEEcCCHHHHHHHHHHHhhcCCEEEEEEECCCChhHHHHHHHHHHHHHHCCC--CEEEEEeccch-HHHH-HHcCCC
Confidence 34577774 58898887632 3588999999999999999999999999999875 99999999998 8999 999999
Q ss_pred CCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 260 SFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 260 ~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
++||+++|++|+. +..+.| .+.++|.++|+++
T Consensus 89 ~~Pt~~~~~~g~~-~~~~~g--~~~~~l~~~l~~~ 120 (130)
T 1wmj_A 89 AMPTFLFIKDGAE-ADKVVG--ARKDDLQNTIVKH 120 (130)
T ss_dssp SSCCCCBCTTTTC-CBCCCT--TCTTTHHHHHHHH
T ss_pred ccceEEEEeCCeE-EEEEeC--CCHHHHHHHHHHH
Confidence 9999999987763 444544 4778899998865
No 112
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.62 E-value=5.1e-16 Score=112.61 Aligned_cols=82 Identities=16% Similarity=0.293 Sum_probs=73.7
Q ss_pred CcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCCCeEEEEeCCCCCeeecCCCCCC
Q 022560 204 EPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRD 283 (295)
Q Consensus 204 k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~Pti~~~~~g~~~~~~~~gg~~~ 283 (295)
.+++|+||++||++|+.+.|.++++++.+++ ++.|+.+|++++ .+++ ++|+|.++||+++ +|+ . .+.| ..+
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~~-~~~~-~~~~v~~~Pt~~~--~G~--~-~~~G-~~~ 73 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMPD-AVEVEYINVMEN-PQKA-MEYGIMAVPTIVI--NGD--V-EFIG-APT 73 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCSS-SEEEEEEESSSS-CCTT-TSTTTCCSSEEEE--TTE--E-ECCS-SSS
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcCC-ceEEEEEECCCC-HHHH-HHCCCcccCEEEE--CCE--E-eeec-CCC
Confidence 4689999999999999999999999999986 799999999998 8899 9999999999999 665 3 6777 678
Q ss_pred HHHHHHHHHHh
Q 022560 284 VDSLMAFVDAL 294 (295)
Q Consensus 284 ~e~l~~fi~~l 294 (295)
.++|.++|+++
T Consensus 74 ~~~l~~~l~~~ 84 (85)
T 1fo5_A 74 KEALVEAIKKR 84 (85)
T ss_dssp SHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999999875
No 113
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.62 E-value=2.8e-15 Score=144.31 Aligned_cols=106 Identities=25% Similarity=0.575 Sum_probs=91.2
Q ss_pred CCCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhc-C-CCeEEEEEEcCCCcHHHHHHhcCCC
Q 022560 182 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLA-G-NGVKVGKFRADGDQKEYAKQKLQLG 259 (295)
Q Consensus 182 ~~~v~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~-~-~~v~~~~vd~~~~~~~l~~~~~~V~ 259 (295)
...|..+++++|+.++. +.+++|||+|||+||++|+.+.|.|+++++.++ + ..+.+++||++.+ . .. . |+|.
T Consensus 357 ~~~v~~l~~~~f~~~v~--~~~k~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~-~-~~-~-~~v~ 430 (504)
T 2b5e_A 357 DSSVFQLVGKNHDEIVN--DPKKDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAKLDHTEN-D-VR-G-VVIE 430 (504)
T ss_dssp SCSEEEECTTTHHHHHH--CTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEGGGC-C-CS-S-CCCS
T ss_pred cccceecccccHHHhhc--cCCCCEEEEEECCCChhHHHHhHHHHHHHHHhhccCCcEEEEEecCCcc-c-cc-c-CCce
Confidence 46789999999999874 468999999999999999999999999999987 2 4699999999987 2 34 4 9999
Q ss_pred CCCeEEEEeCCCC-CeeecCCCCCCHHHHHHHHHHh
Q 022560 260 SFPTILFFPKHSS-KPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 260 ~~Pti~~~~~g~~-~~~~~~gg~~~~e~l~~fi~~l 294 (295)
++||+++|++|+. .+..|.| .++.++|.+||++.
T Consensus 431 ~~Pt~~~~~~G~~~~~~~~~G-~~~~~~l~~~i~~~ 465 (504)
T 2b5e_A 431 GYPTIVLYPGGKKSESVVYQG-SRSLDSLFDFIKEN 465 (504)
T ss_dssp SSSEEEEECCTTSCCCCBCCS-CCCHHHHHHHHHHH
T ss_pred ecCeEEEEeCCceecceEecC-CCCHHHHHHHHHhc
Confidence 9999999988864 3677877 79999999999874
No 114
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.61 E-value=5.6e-16 Score=112.39 Aligned_cols=81 Identities=17% Similarity=0.256 Sum_probs=72.8
Q ss_pred cEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCCCeEEEEeCCCCCeeecCCCCCCH
Q 022560 205 PWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDV 284 (295)
Q Consensus 205 ~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~Pti~~~~~g~~~~~~~~gg~~~~ 284 (295)
.+||+||++||++|+.+.|.++++++.+++ ++.|+.+|++++ .+++ ++|+|.++||+++ +|+ . .+.| ..+.
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~~-~~~~-~~~~v~~~Pt~~~--~G~--~-~~~G-~~~~ 73 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFGD-KIDVEKIDIMVD-REKA-IEYGLMAVPAIAI--NGV--V-RFVG-APSR 73 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHCS-SCCEEEECTTTC-GGGG-GGTCSSCSSEEEE--TTT--E-EEEC-SSCC
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhcC-CeEEEEEECCCC-HHHH-HhCCceeeCEEEE--CCE--E-EEcc-CCCH
Confidence 468999999999999999999999999987 799999999998 8999 9999999999999 666 4 6666 6789
Q ss_pred HHHHHHHHHh
Q 022560 285 DSLMAFVDAL 294 (295)
Q Consensus 285 e~l~~fi~~l 294 (295)
++|.++|+++
T Consensus 74 ~~l~~~l~~~ 83 (85)
T 1nho_A 74 EELFEAINDE 83 (85)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999875
No 115
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.59 E-value=4.1e-15 Score=128.35 Aligned_cols=100 Identities=15% Similarity=0.263 Sum_probs=86.1
Q ss_pred CCceecCcccHHHHHhhcCCCCcE-EEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCC
Q 022560 183 QNLVTLNRTGMENLARLDHRQEPW-LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSF 261 (295)
Q Consensus 183 ~~v~~lt~~~f~~~i~~~~~~k~v-vV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~ 261 (295)
..+..+++++|+.++. .++++ ||+||++||++|+.+.|.+++++..+. ++.|+.||++++ .+++ ++|+|.++
T Consensus 118 ~~~~~l~~~~~~~~~~---~~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~~--~v~~~~vd~~~~-~~l~-~~~~v~~~ 190 (229)
T 2ywm_A 118 QRKPQLSEKTLELLQV---VDIPIEIWVFVTTSCGYCPSAAVMAWDFALAND--YITSKVIDASEN-QDLA-EQFQVVGV 190 (229)
T ss_dssp TTCCSCCHHHHHHHTT---CCSCEEEEEEECTTCTTHHHHHHHHHHHHHHCT--TEEEEEEEGGGC-HHHH-HHTTCCSS
T ss_pred CCccCCCHHHHHHHHh---cCCCeEEEEEECCCCcchHHHHHHHHHHHHHCC--CeEEEEEECCCC-HHHH-HHcCCccc
Confidence 3467788899988764 45555 889999999999999999999999984 599999999999 9999 99999999
Q ss_pred CeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 262 PTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 262 Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
||+++ +|+ +..+.| ..+.++|.++|+++
T Consensus 191 Pt~~~--~G~--~~~~~G-~~~~~~l~~~l~~~ 218 (229)
T 2ywm_A 191 PKIVI--NKG--VAEFVG-AQPENAFLGYIMAV 218 (229)
T ss_dssp SEEEE--GGG--TEEEES-CCCHHHHHHHHHHH
T ss_pred CEEEE--CCE--EEEeeC-CCCHHHHHHHHHHH
Confidence 99998 665 566777 79999999999764
No 116
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.59 E-value=9.2e-15 Score=118.98 Aligned_cols=100 Identities=11% Similarity=0.260 Sum_probs=78.1
Q ss_pred ccHHHHHhh-cCCCCcEEEEEE-CCCChhHHHHHHHH---HHHHHHhcCCCeEEEEEEcCCCc----------HHHHHHh
Q 022560 191 TGMENLARL-DHRQEPWLVVLY-APWCQFCQAMEGSY---VELADKLAGNGVKVGKFRADGDQ----------KEYAKQK 255 (295)
Q Consensus 191 ~~f~~~i~~-~~~~k~vvV~Fy-a~wC~~C~~~~p~~---~~la~~~~~~~v~~~~vd~~~~~----------~~l~~~~ 255 (295)
.++.+.+.. ..+++++||+|| |+||++|+.+.|.+ .++.+.+.. ++.++.||+++.. ..++ ++
T Consensus 34 ~~~~~~~~~a~~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~-~~~~v~vd~~~~~~~~~~~~~~~~~l~-~~ 111 (154)
T 2ju5_A 34 ESYAEALEHSKQDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGV-HLHMVEVDFPQKNHQPEEQRQKNQELK-AQ 111 (154)
T ss_dssp ECHHHHHHHHHHHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHH-HCEEEEEECCSSCCCCHHHHHHHHHHH-HH
T ss_pred CCHHHHHHHHHhCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcC-cEEEEEecCccccCCChhhHhhHHHHH-HH
Confidence 344444432 235899999999 99999999999999 778776644 6999999998751 4888 99
Q ss_pred cCCCCCCeEEEEeCCCCCeeecCCCCC--CHHHHHHHHHHh
Q 022560 256 LQLGSFPTILFFPKHSSKPIKYPSERR--DVDSLMAFVDAL 294 (295)
Q Consensus 256 ~~V~~~Pti~~~~~g~~~~~~~~gg~~--~~e~l~~fi~~l 294 (295)
|+|.++||+++|+.+++.+..+ | .. +.++|.++|+++
T Consensus 112 ~~v~~~Pt~~~~d~~G~~~~~~-G-~~~~~~~~l~~~l~~~ 150 (154)
T 2ju5_A 112 YKVTGFPELVFIDAEGKQLARM-G-FEPGGGAAYVSKVKSA 150 (154)
T ss_dssp TTCCSSSEEEEECTTCCEEEEE-C-CCTTCHHHHHHHHHHH
T ss_pred cCCCCCCEEEEEcCCCCEEEEe-c-CCCCCHHHHHHHHHHH
Confidence 9999999999995444435555 6 66 899999999875
No 117
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.58 E-value=1.9e-14 Score=117.15 Aligned_cols=90 Identities=13% Similarity=0.269 Sum_probs=77.5
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhc-------------------------
Q 022560 202 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKL------------------------- 256 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~------------------------- 256 (295)
+++++||+||++||++|+.+.|.+.++++.+++.++.|+.|+++.. .+.. ++|
T Consensus 33 ~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (165)
T 3or5_A 33 KGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQ-LPNV-KNYMKTQGIIYPVMMATPELIRAFNGYI 110 (165)
T ss_dssp TTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCC-HHHH-HHHHHHHTCCSCEEECCHHHHHHHHTTS
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCC-HHHH-HHHHHHcCCCCceEecCHHHHHHHhhhh
Confidence 5789999999999999999999999999999886799999999987 5555 555
Q ss_pred --CCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 257 --QLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 257 --~V~~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
+|.++|++++++.++++...+.| ..+.++|.++|+++
T Consensus 111 ~~~i~~~P~~~lid~~G~i~~~~~g-~~~~~~l~~~l~~~ 149 (165)
T 3or5_A 111 DGGITGIPTSFVIDASGNVSGVIVG-PRSKADFDRIVKMA 149 (165)
T ss_dssp TTCSCSSSEEEEECTTSBEEEEECS-CCCHHHHHHHHHHH
T ss_pred ccCCCCCCeEEEECCCCcEEEEEcC-CCCHHHHHHHHHHH
Confidence 89999999999766654566666 68999999999875
No 118
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.58 E-value=1.5e-14 Score=116.63 Aligned_cols=91 Identities=14% Similarity=0.229 Sum_probs=78.4
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCC-----------------------cHHHHHHhcC-
Q 022560 202 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD-----------------------QKEYAKQKLQ- 257 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~-----------------------~~~l~~~~~~- 257 (295)
+++++||+||++||++|+.+.|.+.++++.+++.++.|+.|+++.. ...++ +.|+
T Consensus 23 ~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 101 (151)
T 3raz_A 23 KAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANSRNFM-KTYGN 101 (151)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCHHHHH-HTTTC
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCChHHHHHHHHHcCCCCceEecCccchHHHH-HHhCC
Confidence 5899999999999999999999999999999766899999998732 14577 7899
Q ss_pred -CCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 258 -LGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 258 -V~~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
+.++|++++++.++++...+.| ..+.++|.++|+++
T Consensus 102 ~v~~~P~~~lid~~G~i~~~~~g-~~~~~~l~~~l~~l 138 (151)
T 3raz_A 102 TVGVLPFTVVEAPKCGYRQTITG-EVNEKSLTDAVKLA 138 (151)
T ss_dssp CSCCSSEEEEEETTTTEEEECCS-CCCHHHHHHHHHHH
T ss_pred ccCCCCEEEEECCCCcEEEEECC-CCCHHHHHHHHHHH
Confidence 9999999999776665667777 78999999999876
No 119
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.57 E-value=1.5e-14 Score=113.70 Aligned_cols=88 Identities=20% Similarity=0.365 Sum_probs=76.3
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCC---------------------cHHHHHHhcCCCC
Q 022560 202 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD---------------------QKEYAKQKLQLGS 260 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~---------------------~~~l~~~~~~V~~ 260 (295)
++++++|+||++||++|+.+.|.+.++++.++ ++.|+.|+++.+ +..++ +.|+|.+
T Consensus 23 ~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~i~~ 99 (136)
T 1lu4_A 23 QGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP--AVTFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIW-ARYNVPW 99 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTTSHHH-HHTTCCS
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHCC--CcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCchhHH-HhcCCCC
Confidence 57899999999999999999999999999997 599999999872 26788 8999999
Q ss_pred CCeEEEEeCCCCCeeecC---CCCCCHHHHHHHHHHh
Q 022560 261 FPTILFFPKHSSKPIKYP---SERRDVDSLMAFVDAL 294 (295)
Q Consensus 261 ~Pti~~~~~g~~~~~~~~---gg~~~~e~l~~fi~~l 294 (295)
+|++++++.+++.. .+. | ..+.++|.++|+++
T Consensus 100 ~P~~~lid~~G~i~-~~~~~~g-~~~~~~l~~~l~~l 134 (136)
T 1lu4_A 100 QPAFVFYRADGTST-FVNNPTA-AMSQDELSGRVAAL 134 (136)
T ss_dssp SSEEEEECTTSCEE-EECCSSS-CCCHHHHHHHHHHC
T ss_pred CCEEEEECCCCcEE-EEEcCCC-ccCHHHHHHHHHHH
Confidence 99999996555434 666 6 78999999999875
No 120
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.57 E-value=3.7e-14 Score=112.84 Aligned_cols=102 Identities=16% Similarity=0.195 Sum_probs=83.0
Q ss_pred eecCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcC--------------------
Q 022560 186 VTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD-------------------- 245 (295)
Q Consensus 186 ~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~-------------------- 245 (295)
..++++.+..... +++++||+||++||++|+.+.|.+.++++.+.+ .+.|+.|+++
T Consensus 15 ~~~~g~~~~~~~~---~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 90 (148)
T 2b5x_A 15 AWLNGEVTREQLI---GEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQD-QLNVVAVHMPRSEDDLDPGKIKETAAEHDI 90 (148)
T ss_dssp EEESCCCCHHHHT---TTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TSEEEEEECCCSTTTSSHHHHHHHHHHTTC
T ss_pred ccccCcccchhhc---CCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcC-CcEEEEEEcCCCccccCHHHHHHHHHHcCC
Confidence 4566666654332 689999999999999999999999999999988 4999999964
Q ss_pred -------CCcHHHHHHhcCCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 246 -------GDQKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 246 -------~~~~~l~~~~~~V~~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
.+ ..++ +.|+|.++|++++++.+++....+.| ..+.++|.++|+++
T Consensus 91 ~~~~~~d~~-~~~~-~~~~v~~~P~~~lid~~G~i~~~~~g-~~~~~~l~~~l~~~ 143 (148)
T 2b5x_A 91 TQPIFVDSD-HALT-DAFENEYVPAYYVFDKTGQLRHFQAG-GSGMKMLEKRVNRV 143 (148)
T ss_dssp CSCEEECSS-CHHH-HHTCCCCSSEEEEECTTCBEEEEEES-CSTTHHHHHHHHHH
T ss_pred CcceEECCc-hhHH-HHhCCCCCCEEEEECCCCcEEEEecC-CCCHHHHHHHHHHH
Confidence 33 6788 89999999999999655554555666 67889999999875
No 121
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=99.34 E-value=2.1e-16 Score=124.35 Aligned_cols=88 Identities=16% Similarity=0.244 Sum_probs=74.4
Q ss_pred CCCcEEEEEECCCChhHHHHHHHH---HHHHHHhcCCCeEEEEEEcC--CCcHHHHHHhcCCCCCCeEEEEe--CCCCC-
Q 022560 202 RQEPWLVVLYAPWCQFCQAMEGSY---VELADKLAGNGVKVGKFRAD--GDQKEYAKQKLQLGSFPTILFFP--KHSSK- 273 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~C~~~~p~~---~~la~~~~~~~v~~~~vd~~--~~~~~l~~~~~~V~~~Pti~~~~--~g~~~- 273 (295)
+++++||+|||+||++|+.+.|.+ .++++.+.+ ++.++.||++ ++ ..++ ++|+|.++||+++|+ +|+ .
T Consensus 18 ~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~-~~~~-~~~~v~~~Pt~~~~d~~~G~-~~ 93 (130)
T 2lst_A 18 HGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEA-RFVVASVSVDTPEG-QELA-RRYRVPGTPTFVFLVPKAGA-WE 93 (130)
Confidence 688999999999999999999999 889888876 7999999995 44 7889 999999999999995 444 2
Q ss_pred -eeecCCCCCCHHHHHHHHHHh
Q 022560 274 -PIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 274 -~~~~~gg~~~~e~l~~fi~~l 294 (295)
+..+.| ..+.++|.++|+++
T Consensus 94 ~~~~~~G-~~~~~~l~~~l~~~ 114 (130)
T 2lst_A 94 EVGRLFG-SRPRAEFLKELRQV 114 (130)
Confidence 345666 68889999998764
No 122
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.55 E-value=4.1e-15 Score=123.09 Aligned_cols=86 Identities=14% Similarity=0.140 Sum_probs=69.2
Q ss_pred eecCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcC---CCCCC
Q 022560 186 VTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQ---LGSFP 262 (295)
Q Consensus 186 ~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~---V~~~P 262 (295)
+.++++.+..+.. .++++++|+|||+||++|+.+.|.++++++.+++ +.|+.||.+++ ++++ .+|. +.++|
T Consensus 39 ~~~~~~~~~~l~~--~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~~--v~~~~v~~d~~-~~~~-~~~~~~~v~~iP 112 (167)
T 1z6n_A 39 NGLPSALTERLQR--IERRYRLLVAGEMWCPDCQINLAALDFAQRLQPN--IELAIISKGRA-EDDL-RQRLALERIAIP 112 (167)
T ss_dssp HCCCHHHHHHHHT--CCSCEEEEEECCTTCHHHHHHHHHHHHHHHHCTT--EEEEEECHHHH-HHHT-TTTTTCSSCCSS
T ss_pred cCCCHHHHHHHHH--hCCCEEEEEEECCCChhHHHHHHHHHHHHHHCCC--cEEEEEECCCC-HHHH-HHHHHcCCCCcC
Confidence 3455555554432 2568999999999999999999999999988754 99999999988 8888 8887 99999
Q ss_pred eEEEEeCCCCCeeec
Q 022560 263 TILFFPKHSSKPIKY 277 (295)
Q Consensus 263 ti~~~~~g~~~~~~~ 277 (295)
|+++|++|++....+
T Consensus 113 t~i~~~~~G~~~~~~ 127 (167)
T 1z6n_A 113 LVLVLDEEFNLLGRF 127 (167)
T ss_dssp EEEEECTTCCEEEEE
T ss_pred eEEEECCCCCEEEEE
Confidence 999999875533333
No 123
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=99.55 E-value=3e-15 Score=116.14 Aligned_cols=87 Identities=11% Similarity=0.187 Sum_probs=68.5
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcC----CCeEEEEEEcCCCc-HHHHHHhcCCCCCCeEEEEeCCCCCeee
Q 022560 202 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAG----NGVKVGKFRADGDQ-KEYAKQKLQLGSFPTILFFPKHSSKPIK 276 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~----~~v~~~~vd~~~~~-~~l~~~~~~V~~~Pti~~~~~g~~~~~~ 276 (295)
+.+.+||+|||+||++|+.+.+.+... +.. ..+.+++||++.+. .+++ .+|+|.++||+++|++|++ +.+
T Consensus 17 ~~~~~LV~F~A~wC~~Ck~~~~~i~~~---~~~~a~~~~~~l~~vdv~~~~~~~la-~~~~V~g~PT~i~f~~G~e-v~R 91 (116)
T 3dml_A 17 KAELRLLMFEQPGCLYCARWDAEIAPQ---YPLTDEGRAAPVQRLQMRDPLPPGLE-LARPVTFTPTFVLMAGDVE-SGR 91 (116)
T ss_dssp --CEEEEEEECTTCHHHHHHHHHTTTT---GGGSHHHHHSCEEEEETTSCCCTTCB-CSSCCCSSSEEEEEETTEE-EEE
T ss_pred cCCCEEEEEECCCCHHHHHHHHHHHhh---HHHhhhcccceEEEEECCCCCchhHH-HHCCCCCCCEEEEEECCEE-Eee
Confidence 457899999999999999999765432 332 12788899998862 4677 8899999999999998875 556
Q ss_pred cCCCCCCHHHHHHHHHHh
Q 022560 277 YPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 277 ~~gg~~~~e~l~~fi~~l 294 (295)
..| ....+.|..+|+++
T Consensus 92 i~G-~~~~~~f~~~L~~~ 108 (116)
T 3dml_A 92 LEG-YPGEDFFWPMLARL 108 (116)
T ss_dssp EEC-CCCHHHHHHHHHHH
T ss_pred ecC-CCCHHHHHHHHHHH
Confidence 666 79999999999864
No 124
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.54 E-value=1.8e-14 Score=117.20 Aligned_cols=105 Identities=14% Similarity=0.260 Sum_probs=82.9
Q ss_pred CceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcC------------------
Q 022560 184 NLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD------------------ 245 (295)
Q Consensus 184 ~v~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~------------------ 245 (295)
.+..++++.+.... .+++++||+||++||++|+.+.|.|.++++.|+..++.|+.|+++
T Consensus 22 ~l~~~~g~~~~~~~---~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~ 98 (164)
T 2h30_A 22 TMKTADNRPASVYL---KKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKDGEFQKWYAGL 98 (164)
T ss_dssp TCEETTSSBGGGGC---CTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTTHHHHHHTTS
T ss_pred ccCCCCCCEeeHHH---hCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccCHHHHHHHHHhC
Confidence 46666766655422 368899999999999999999999999999886656777777643
Q ss_pred ----------CCcHHHHHHhcCCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 246 ----------GDQKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 246 ----------~~~~~l~~~~~~V~~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
.+ ..++ ++|+|.++|++++++.+++....+.| ..+.++|.++|+++
T Consensus 99 ~~~~~~~~~d~~-~~~~-~~~~v~~~P~~~lid~~G~i~~~~~g-~~~~~~l~~~i~~~ 154 (164)
T 2h30_A 99 NYPKLPVVTDNG-GTIA-QNLNISVYPSWALIGKDGDVQRIVKG-SINEAQALALIRNP 154 (164)
T ss_dssp CCTTSCEEECTT-CHHH-HHTTCCSSSEEEEECTTSCEEEEEES-CCCHHHHHHHHHCT
T ss_pred CCCcceEEEcCc-hHHH-HHcCCCccceEEEECCCCcEEEEEcC-CCCHHHHHHHHHHH
Confidence 23 5788 89999999999999655544555666 78999999999875
No 125
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.54 E-value=3.3e-14 Score=111.40 Aligned_cols=88 Identities=20% Similarity=0.277 Sum_probs=75.5
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCC----------------------cHHHHHHhcCCC
Q 022560 202 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD----------------------QKEYAKQKLQLG 259 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~----------------------~~~l~~~~~~V~ 259 (295)
.+++++|+||++||++|+.+.|.+.++++.++ ++.|+.|+++.. +..++ +.|+|.
T Consensus 24 ~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~i~ 100 (136)
T 1zzo_A 24 LGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP--EVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVW-ANFGVT 100 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSSCHHHHHHHHHHTTCTTSEEEECTTCHHH-HHTTCC
T ss_pred CCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC--CeEEEEEeCCCCHHHHHHHHHHcCCCceEEEEcCCcHHH-HHcCCC
Confidence 57899999999999999999999999999987 499999998541 26788 899999
Q ss_pred CCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 260 SFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 260 ~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
++|++++++.+++.. .+.| ..+.++|.++|+++
T Consensus 101 ~~P~~~~id~~g~i~-~~~g-~~~~~~l~~~l~~~ 133 (136)
T 1zzo_A 101 QQPAYAFVDPHGNVD-VVRG-RMSQDELTRRVTAL 133 (136)
T ss_dssp SSSEEEEECTTCCEE-EEES-CCCHHHHHHHHHHH
T ss_pred CCceEEEECCCCCEE-EEec-CCCHHHHHHHHHHH
Confidence 999999997555434 6766 68999999999875
No 126
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.54 E-value=3.3e-14 Score=114.32 Aligned_cols=91 Identities=8% Similarity=0.249 Sum_probs=77.9
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCC---------------------cHHHHHHhcCCCC
Q 022560 202 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD---------------------QKEYAKQKLQLGS 260 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~---------------------~~~l~~~~~~V~~ 260 (295)
.++++||+||++||++|+.+.|.+.++.+.+++.++.|+.|+++.. +..++ +.|+|.+
T Consensus 25 ~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~v~~ 103 (151)
T 2f9s_A 25 KGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVL-DAYDVSP 103 (151)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHH-HHTTCCS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHH-HhcCCCC
Confidence 5789999999999999999999999999999875699999998763 14788 8999999
Q ss_pred CCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 261 FPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 261 ~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
+|++++++..+++...+.| ..+.++|.++|+++
T Consensus 104 ~P~~~lid~~G~i~~~~~G-~~~~~~l~~~l~~l 136 (151)
T 2f9s_A 104 LPTTFLINPEGKVVKVVTG-TMTESMIHDYMNLI 136 (151)
T ss_dssp SCEEEEECTTSEEEEEEES-CCCHHHHHHHHHHH
T ss_pred CCeEEEECCCCcEEEEEeC-CCCHHHHHHHHHHH
Confidence 9999999655554555666 68999999999876
No 127
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.54 E-value=3.6e-15 Score=122.87 Aligned_cols=97 Identities=16% Similarity=0.313 Sum_probs=73.6
Q ss_pred ccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHH-HHHHhcCC--CCCCeEEEE
Q 022560 191 TGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKE-YAKQKLQL--GSFPTILFF 267 (295)
Q Consensus 191 ~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~-l~~~~~~V--~~~Pti~~~ 267 (295)
+.|..... ++++|||+|||+||++|+.+.|.|.++++.+.. ++.|+.||++.+ .. ++ ..|++ .++||+++|
T Consensus 37 ~~~~~~~~---~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~-~~~~~~v~~d~~-~~~~~-~~~~~~~~~~Pt~~~~ 110 (164)
T 1sen_A 37 DGKKEAAA---SGLPLMVIIHKSWCGACKALKPKFAESTEISEL-SHNFVMVNLEDE-EEPKD-EDFSPDGGYIPRILFL 110 (164)
T ss_dssp HHHHHHHH---HTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHH-HTTSEEEEEEGG-GSCSC-GGGCTTCSCSSEEEEE
T ss_pred HHHHHHHh---cCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhc-CCeEEEEEecCC-chHHH-HHhcccCCcCCeEEEE
Confidence 44544443 689999999999999999999999998776654 467788888776 44 67 78888 669999999
Q ss_pred e-CCCCCeeecCCC---------CCCHHHHHHHHHHh
Q 022560 268 P-KHSSKPIKYPSE---------RRDVDSLMAFVDAL 294 (295)
Q Consensus 268 ~-~g~~~~~~~~gg---------~~~~e~l~~fi~~l 294 (295)
+ +|+. +..+.|. ..+.++|.++|+++
T Consensus 111 d~~G~~-~~~~~G~~~~~~~~~~~~~~~~l~~~l~~~ 146 (164)
T 1sen_A 111 DPSGKV-HPEIINENGNPSYKYFYVSAEQVVQGMKEA 146 (164)
T ss_dssp CTTSCB-CTTCCCTTSCTTSTTCCCSHHHHHHHHHHH
T ss_pred CCCCCE-EEEEeCCCCccchhcccCCHHHHHHHHHHH
Confidence 4 5553 4444442 26889999988764
No 128
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.54 E-value=5.7e-14 Score=142.00 Aligned_cols=110 Identities=24% Similarity=0.478 Sum_probs=96.7
Q ss_pred CCCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCC
Q 022560 182 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSF 261 (295)
Q Consensus 182 ~~~v~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~ 261 (295)
.+.|..|+.++|++++.....++.++|.||+|||++|+.+.|.|+++++.+++ .+.|+.||++.+ ..++ ++|+|.++
T Consensus 542 ~~~v~~l~~~~f~~~v~~~~~~~~~lv~F~ap~C~~c~~~~p~~~~lA~~~~~-~v~~~~vd~~~~-~~l~-~~~~v~~~ 618 (780)
T 3apo_A 542 NPSVVSLTPSTFNELVKQRKHDEVWMVDFYSPWSHPSQVLMPEWKRMARTLTG-LINVGSVDCGQY-HSFC-TQENVQRY 618 (780)
T ss_dssp SCSEEECCHHHHHHHTTTCCTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TSEEEEEETTTT-HHHH-HHTTCCSS
T ss_pred ccceeecCcccHHHHhhccCCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhC-CeEEEEEECcch-HHHH-HHcCCCCC
Confidence 46789999999999886333467899999999999999999999999999998 799999999998 8999 99999999
Q ss_pred CeEEEEeCCCC---CeeecCCCCCCHHHHHHHHHHh
Q 022560 262 PTILFFPKHSS---KPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 262 Pti~~~~~g~~---~~~~~~gg~~~~e~l~~fi~~l 294 (295)
||+++|+.|.. ....|.|..++.++|.+||.+.
T Consensus 619 Pti~~~~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~ 654 (780)
T 3apo_A 619 PEIRFYPQKSSKAYQYHSYNGWNRDAYSLRSWGLGF 654 (780)
T ss_dssp SEEEEECCCSSSCCSCEECCCSCCSHHHHHHHHHTT
T ss_pred CeEEEEcCCCcCccchhhcCCCCCCHHHHHHHHhhh
Confidence 99999988764 3567877468999999999864
No 129
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=99.53 E-value=2.5e-15 Score=122.30 Aligned_cols=99 Identities=13% Similarity=0.144 Sum_probs=63.2
Q ss_pred cHHHHHhh-cCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCCCeEEEEe-C
Q 022560 192 GMENLARL-DHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILFFP-K 269 (295)
Q Consensus 192 ~f~~~i~~-~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~Pti~~~~-~ 269 (295)
+|++.++. ..++++|||+|||+||++|+.+.|.+.+..+.....+..|+.|+++.+..+++ .+++|.++||++||+ +
T Consensus 32 ~~~~al~~A~~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~~~fv~V~vD~e~~~~~-~~~~v~~~PT~~f~~~~ 110 (151)
T 3ph9_A 32 TYEEGLFYAQKSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQNKFIMLNLMHETTDKN-LSPDGQYVPRIMFVDPS 110 (151)
T ss_dssp SHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHHHTCEEEEESSCCSCGG-GCTTCCCSSEEEEECTT
T ss_pred CHHHHHHHHHHcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhhcCeEEEEecCCchhhH-hhcCCCCCCEEEEECCC
Confidence 44444432 23689999999999999999999999864322110012345555543224566 789999999999999 5
Q ss_pred CCCCeeecCCCC-------CCHHHHHHHHHH
Q 022560 270 HSSKPIKYPSER-------RDVDSLMAFVDA 293 (295)
Q Consensus 270 g~~~~~~~~gg~-------~~~e~l~~fi~~ 293 (295)
|+ .+....| . ...+++.++|+.
T Consensus 111 G~-~v~~~~G-~~~~~~~~~~~~~~~~ll~~ 139 (151)
T 3ph9_A 111 LT-VRADIAG-RYSNRLYTYEPRDLPLLIEN 139 (151)
T ss_dssp SC-BCTTCCC-SCTTSTTCCCGGGHHHHHHH
T ss_pred CC-EEEEEeC-CcCCcccccchhhHHHHHHH
Confidence 55 3444445 4 444444444443
No 130
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.53 E-value=3.5e-14 Score=112.58 Aligned_cols=88 Identities=11% Similarity=0.272 Sum_probs=76.2
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCC-------------------------CcHHHHHHhc
Q 022560 202 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG-------------------------DQKEYAKQKL 256 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~-------------------------~~~~l~~~~~ 256 (295)
+++++||+||++||++|+.+.|.+.++++.+++.++.|+.|+++. + ..++ +.|
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~-~~~ 110 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDSK-GELM-KEY 110 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECSS-SHHH-HHT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcCc-hhHH-Hhc
Confidence 678999999999999999999999999999985479999999964 3 5888 999
Q ss_pred CCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHH
Q 022560 257 QLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVD 292 (295)
Q Consensus 257 ~V~~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~ 292 (295)
+|.++|++++++.++++...+.| ..+.++|.++|+
T Consensus 111 ~v~~~P~~~lid~~G~i~~~~~g-~~~~~~l~~~l~ 145 (145)
T 3erw_A 111 HIITIPTSFLLNEKGEIEKTKIG-PMTAEQLKEWTE 145 (145)
T ss_dssp TCCEESEEEEECTTCCEEEEEES-CCCHHHHHHHHC
T ss_pred CcCccCeEEEEcCCCcEEEEEcC-CcCHHHHHHhhC
Confidence 99999999999665554566666 789999998873
No 131
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.53 E-value=5.6e-14 Score=123.08 Aligned_cols=97 Identities=15% Similarity=0.198 Sum_probs=79.2
Q ss_pred cCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhc--C-CCeEEEEEEcCCCcHHHHHHhcCCCCCCeE
Q 022560 188 LNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLA--G-NGVKVGKFRADGDQKEYAKQKLQLGSFPTI 264 (295)
Q Consensus 188 lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~--~-~~v~~~~vd~~~~~~~l~~~~~~V~~~Pti 264 (295)
++.+.++.+.+ ..++.+|+.|||+||++|+.+.|.+++++..++ + .++.+..||++.+ ++++ ++|+|.++||+
T Consensus 125 l~~~~~~~~~~--~~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~~~-~~~~-~~~~V~~vPt~ 200 (243)
T 2hls_A 125 LEDATKEALKS--LKGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAYEN-PDIA-DKYGVMSVPSI 200 (243)
T ss_dssp CCHHHHHHHHH--CCSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETTTC-HHHH-HHTTCCSSSEE
T ss_pred CCHHHHHHHHH--cCCCcEEEEEECCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEECccC-HHHH-HHcCCeeeCeE
Confidence 44455554432 235678999999999999999999999999983 1 3699999999999 8999 99999999999
Q ss_pred EEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 265 LFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 265 ~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
++ +|+ +. +.| .++.++|.++|++.
T Consensus 201 ~i--~G~--~~-~~G-~~~~~~l~~~l~~~ 224 (243)
T 2hls_A 201 AI--NGY--LV-FVG-VPYEEDFLDYVKSA 224 (243)
T ss_dssp EE--TTE--EE-EES-CCCHHHHHHHHHHH
T ss_pred EE--CCE--EE-EeC-CCCHHHHHHHHHHH
Confidence 88 665 33 777 78999999999864
No 132
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.52 E-value=2.9e-14 Score=122.52 Aligned_cols=99 Identities=15% Similarity=0.227 Sum_probs=80.4
Q ss_pred cccHHHHHhhcCCCCcEEEEEECC-CChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCC--CcHHHHHHhcCCCCCCeEEE
Q 022560 190 RTGMENLARLDHRQEPWLVVLYAP-WCQFCQAMEGSYVELADKLAGNGVKVGKFRADG--DQKEYAKQKLQLGSFPTILF 266 (295)
Q Consensus 190 ~~~f~~~i~~~~~~k~vvV~Fya~-wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~--~~~~l~~~~~~V~~~Pti~~ 266 (295)
.+++.++++...++..++|+||++ ||++|+.+.|.++++++. .+ ++.|+.||+++ + ++++ ++|+|.++||+++
T Consensus 9 ~~~~~~~~~~~~~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~-~~-~v~~~~vd~~~~~~-~~~~-~~~~v~~~Pt~~~ 84 (226)
T 1a8l_A 9 KKVIKEEFFSKMVNPVKLIVFVRKDHCQYCDQLKQLVQELSEL-TD-KLSYEIVDFDTPEG-KELA-KRYRIDRAPATTI 84 (226)
T ss_dssp HHHHHHHTGGGCCSCEEEEEEECSSSCTTHHHHHHHHHHHHTT-CT-TEEEEEEETTSHHH-HHHH-HHTTCCSSSEEEE
T ss_pred HHHHHHHHHHhcCCCeEEEEEecCCCCchhHHHHHHHHHHHhh-CC-ceEEEEEeCCCccc-HHHH-HHcCCCcCceEEE
Confidence 355666552123456778999999 999999999999999865 34 69999999998 7 8999 9999999999999
Q ss_pred EeCCCCCeeecCCCCCCHHHHHHHHHH
Q 022560 267 FPKHSSKPIKYPSERRDVDSLMAFVDA 293 (295)
Q Consensus 267 ~~~g~~~~~~~~gg~~~~e~l~~fi~~ 293 (295)
|++|+.....|.| ..+.+++.+|+..
T Consensus 85 ~~~g~~~~~~~~G-~~~~~~l~~~l~~ 110 (226)
T 1a8l_A 85 TQDGKDFGVRYFG-LPAGHEFAAFLED 110 (226)
T ss_dssp EETTBCCSEEEES-CCCTTHHHHHHHH
T ss_pred EcCCceeeEEEec-cCcHHHHHHHHHH
Confidence 9988754467777 6777888888865
No 133
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.52 E-value=5.7e-15 Score=113.03 Aligned_cols=74 Identities=16% Similarity=0.302 Sum_probs=61.0
Q ss_pred CCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcC------CCcHHHHHHhcCCCCCCeEEEEeCCCCCeee
Q 022560 203 QEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD------GDQKEYAKQKLQLGSFPTILFFPKHSSKPIK 276 (295)
Q Consensus 203 ~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~------~~~~~l~~~~~~V~~~Pti~~~~~g~~~~~~ 276 (295)
++++||+|||+||++|+.+.|.|+++++.++ .||++ ++ .+++ ++|+|.++||+++ +|+ .
T Consensus 12 ~k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~-------~v~~~~~~~~~~~-~~l~-~~~~V~~~PT~~i--~G~--~-- 76 (106)
T 3kp8_A 12 RQIGGTMYGAYWCPHCQDQKELFGAAFDQVP-------YVECSPNGPGTPQ-AQEC-TEAGITSYPTWII--NGR--T-- 76 (106)
T ss_dssp HHHTCEEEECTTCHHHHHHHHHHGGGGGGSC-------EEESCTTCTTSCC-CHHH-HHTTCCSSSEEEE--TTE--E--
T ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHHhCC-------EEEEecccccchh-HHHH-HHcCCeEeCEEEE--CCE--E--
Confidence 5778999999999999999999999986553 45555 45 7899 9999999999777 654 2
Q ss_pred cCCCCCCHHHHHHHHH
Q 022560 277 YPSERRDVDSLMAFVD 292 (295)
Q Consensus 277 ~~gg~~~~e~l~~fi~ 292 (295)
+.| ..+.++|.+|+.
T Consensus 77 ~~G-~~~~~~l~~~~~ 91 (106)
T 3kp8_A 77 YTG-VRSLEALAVASG 91 (106)
T ss_dssp EES-CCCHHHHHHHHT
T ss_pred ecC-CCCHHHHHHHhC
Confidence 666 799999999874
No 134
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=99.51 E-value=2.2e-14 Score=119.22 Aligned_cols=79 Identities=13% Similarity=0.275 Sum_probs=65.6
Q ss_pred cCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHH-H--HHHHHHhcCCCeEEEEEEcCCCcHHHHHHhc--------
Q 022560 188 LNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGS-Y--VELADKLAGNGVKVGKFRADGDQKEYAKQKL-------- 256 (295)
Q Consensus 188 lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~-~--~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~-------- 256 (295)
..++.|+.... ++|+|||+|||+||++|+.|.|. | .++++.+.+ ++.+++||.++. +++. +.|
T Consensus 27 ~~~ea~~~A~~---~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~-~fv~ikVD~de~-~~l~-~~y~~~~q~~~ 100 (173)
T 3ira_A 27 WGEEAFEKARK---ENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNE-AFVSIKVDREER-PDID-NIYMTVCQIIL 100 (173)
T ss_dssp SSHHHHHHHHH---HTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHH-HCEEEEEETTTC-HHHH-HHHHHHHHHHH
T ss_pred cCHHHHHHHHH---hCCCEEEecccchhHhhccccccccCCHHHHHHHHh-cCceeeeCCccc-CcHH-HHHHHHHHHHc
Confidence 34566777655 79999999999999999999994 3 567777765 699999999998 8888 777
Q ss_pred CCCCCCeEEEEeCCCC
Q 022560 257 QLGSFPTILFFPKHSS 272 (295)
Q Consensus 257 ~V~~~Pti~~~~~g~~ 272 (295)
+|.++||+++|+.+++
T Consensus 101 gv~g~Pt~v~l~~dG~ 116 (173)
T 3ira_A 101 GRGGWPLNIIMTPGKK 116 (173)
T ss_dssp SCCCSSEEEEECTTSC
T ss_pred CCCCCcceeeECCCCC
Confidence 9999999999984443
No 135
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.51 E-value=1.1e-13 Score=112.03 Aligned_cols=90 Identities=16% Similarity=0.140 Sum_probs=76.3
Q ss_pred CCCcEEEEEECCCChhHHH-HHHHHHHHHHHhcCCCeEEEEEEcC----------------------------CCcHH--
Q 022560 202 RQEPWLVVLYAPWCQFCQA-MEGSYVELADKLAGNGVKVGKFRAD----------------------------GDQKE-- 250 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~C~~-~~p~~~~la~~~~~~~v~~~~vd~~----------------------------~~~~~-- 250 (295)
+++++||+||++||++|+. +.|.+.++++.|++.++.|+.|+++ .. ..
T Consensus 29 ~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~ 107 (160)
T 3lor_A 29 RGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSVFEHHDVMTPEALKVFIDEFGIKFPVAVDMP-REGQ 107 (160)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECC-CTTC
T ss_pred CCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEeccccccccCCHHHHHHHHHHcCCCCcEEECCc-cccc
Confidence 5899999999999999999 6999999999998867999999863 22 23
Q ss_pred ----HHHHhcCCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 251 ----YAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 251 ----l~~~~~~V~~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
+. +.|+|.++|++++++..+++...+.| ..+.++|.+.|+++
T Consensus 108 ~~~~~~-~~~~v~~~P~~~lid~~G~i~~~~~g-~~~~~~l~~~i~~l 153 (160)
T 3lor_A 108 RIPSTM-KKYRLEGTPSIILADRKGRIRQVQFG-QVDDFVLGLLLGSL 153 (160)
T ss_dssp SSCHHH-HHTTCCSSSEEEEECTTSBEEEEEES-CCCHHHHHHHHHHH
T ss_pred hhhhHH-HhcccCccceEEEECCCCcEEEEecC-cCCHHHHHHHHHHH
Confidence 78 89999999999999866655666666 68999999999875
No 136
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=99.51 E-value=5.4e-14 Score=100.11 Aligned_cols=74 Identities=15% Similarity=0.252 Sum_probs=63.9
Q ss_pred EEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCCCeEEEEeCCCCCeeecCCCCC-CH
Q 022560 206 WLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERR-DV 284 (295)
Q Consensus 206 vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~Pti~~~~~g~~~~~~~~gg~~-~~ 284 (295)
+.|.||++||++|+.+.|.++++++.+.+ ++.++.|| + .+++ ++|+|.++||+++ +|+ .+.. | .. +.
T Consensus 2 ~~v~f~a~wC~~C~~~~~~l~~~~~~~~~-~~~~~~v~---~-~~~~-~~~~v~~~Pt~~~--~G~--~~~~-G-~~~~~ 69 (77)
T 1ilo_A 2 MKIQIYGTGCANCQMLEKNAREAVKELGI-DAEFEKIK---E-MDQI-LEAGLTALPGLAV--DGE--LKIM-G-RVASK 69 (77)
T ss_dssp EEEEEECSSSSTTHHHHHHHHHHHHHTTC-CEEEEEEC---S-HHHH-HHHTCSSSSCEEE--TTE--EEEC-S-SCCCH
T ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHcCC-ceEEEEec---C-HHHH-HHCCCCcCCEEEE--CCE--EEEc-C-CCCCH
Confidence 46899999999999999999999999986 69999998 5 7889 9999999999999 665 4444 6 66 89
Q ss_pred HHHHHHH
Q 022560 285 DSLMAFV 291 (295)
Q Consensus 285 e~l~~fi 291 (295)
++|.++|
T Consensus 70 ~~l~~~l 76 (77)
T 1ilo_A 70 EEIKKIL 76 (77)
T ss_dssp HHHHHHC
T ss_pred HHHHHHh
Confidence 9998876
No 137
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.51 E-value=5.7e-14 Score=111.91 Aligned_cols=89 Identities=12% Similarity=0.206 Sum_probs=75.3
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHH-------------------------HHHHhc
Q 022560 202 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKE-------------------------YAKQKL 256 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~-------------------------l~~~~~ 256 (295)
.++++||+||++||++|+.+.|.+.++.+.+++.++.|+.|+++.. .+ ++ +.|
T Consensus 30 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~-~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~ 107 (148)
T 3hcz_A 30 QAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIERK-DEEWLKFIRSKKIGGWLNVRDSKNHTDFK-ITY 107 (148)
T ss_dssp CCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCSS-SHHHHHHHHHHTCTTSEEEECTTCCCCHH-HHH
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecCC-HHHHHHHHHHcCCCCceEEeccccchhHH-Hhc
Confidence 5789999999999999999999999999999885699999999976 55 88 899
Q ss_pred CCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHH
Q 022560 257 QLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDA 293 (295)
Q Consensus 257 ~V~~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~ 293 (295)
+|.++|++++++.++.+...+.| ..+.+++++.|.+
T Consensus 108 ~i~~~P~~~lid~~G~i~~~~~g-~~~~~~~l~~l~~ 143 (148)
T 3hcz_A 108 DIYATPVLYVLDKNKVIIAKRIG-YENLDDFLVQYEK 143 (148)
T ss_dssp CCCSSCEEEEECTTCBEEEESCC-GGGHHHHHHHHHH
T ss_pred CcCCCCEEEEECCCCcEEEecCC-HHHHHHHHHHHHH
Confidence 99999999999766655666666 5667777666654
No 138
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.50 E-value=9.4e-14 Score=108.57 Aligned_cols=90 Identities=18% Similarity=0.292 Sum_probs=75.9
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcC----------------------------CCcHHHHH
Q 022560 202 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD----------------------------GDQKEYAK 253 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~----------------------------~~~~~l~~ 253 (295)
+++++||+||++||++|+.+.|.+.++++.+.+ ++.++.|+++ .+ ..++
T Consensus 21 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~- 97 (138)
T 4evm_A 21 KGKKVYLKFWASWCSICLASLPDTDEIAKEAGD-DYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDPS-GKLL- 97 (138)
T ss_dssp TTSEEEEEECCTTCHHHHHHHHHHHHHHHTCTT-TEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCCEEECTT-CHHH-
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCC-CcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCeeEEECcc-hHHH-
Confidence 578999999999999999999999999999765 7999999542 23 5788
Q ss_pred HhcCCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHhC
Q 022560 254 QKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDALR 295 (295)
Q Consensus 254 ~~~~V~~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l~ 295 (295)
+.|+|.++|++++++.++++...+.| ..+.++|.++|++++
T Consensus 98 ~~~~v~~~P~~~lid~~G~i~~~~~g-~~~~~~l~~~l~~l~ 138 (138)
T 4evm_A 98 ETYGVRSYPTQAFIDKEGKLVKTHPG-FMEKDAILQTLKELA 138 (138)
T ss_dssp HHTTCCSSSEEEEECTTCCEEEEEES-CCCHHHHHHHHHHCC
T ss_pred HHcCcccCCeEEEECCCCcEEEeecC-CCcHHHHHHHHHhhC
Confidence 89999999999999665554566666 789999999999874
No 139
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.50 E-value=1.9e-13 Score=110.97 Aligned_cols=91 Identities=15% Similarity=0.333 Sum_probs=77.1
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCC-------------------CcHHHHHHhcCCCCCC
Q 022560 202 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG-------------------DQKEYAKQKLQLGSFP 262 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~-------------------~~~~l~~~~~~V~~~P 262 (295)
+++++||+||++||++|+.+.|.+.++++.+++.++.|+.|+++. . ..++ +.|+|.++|
T Consensus 40 ~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~~-~~~~-~~~~v~~~P 117 (158)
T 3hdc_A 40 RGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEKRFPEKYRRAPVSFNFLSDAT-GQVQ-QRYGANRLP 117 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSSSCCGGGGGCCCSCEEEECTT-SHHH-HHTTCCSSS
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCHHHHHHHHHcCCCceEEECch-HHHH-HHhCCCCcc
Confidence 578999999999999999999999999999986579999999987 4 6888 999999999
Q ss_pred eEEEEeCCCCCeeecCCC-CCCHHHHHHHHHHh
Q 022560 263 TILFFPKHSSKPIKYPSE-RRDVDSLMAFVDAL 294 (295)
Q Consensus 263 ti~~~~~g~~~~~~~~gg-~~~~e~l~~fi~~l 294 (295)
++++++.++++...+.|. ..+.+++++.+.+.
T Consensus 118 ~~~lid~~G~i~~~~~G~~~~~~~~~~~~~~~~ 150 (158)
T 3hdc_A 118 DTFIVDRKGIIRQRVTGGIEWDAPKVVSYLKSL 150 (158)
T ss_dssp EEEEECTTSBEEEEEESCCCTTSHHHHHHHHTT
T ss_pred eEEEEcCCCCEEEEEeCCCccchHHHHHHHHhh
Confidence 999997666656666663 35678888777654
No 140
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.50 E-value=1.2e-13 Score=111.65 Aligned_cols=90 Identities=13% Similarity=0.079 Sum_probs=76.1
Q ss_pred CCCcEEEEEECCCChhHHHH-HHHHHHHHHHhcCCCeEEEEEEcC----------------------------CCcH---
Q 022560 202 RQEPWLVVLYAPWCQFCQAM-EGSYVELADKLAGNGVKVGKFRAD----------------------------GDQK--- 249 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~C~~~-~p~~~~la~~~~~~~v~~~~vd~~----------------------------~~~~--- 249 (295)
+++++||+||++||++|+.+ .|.+.++++.|++.++.|+.|+++ .. .
T Consensus 27 ~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~ 105 (158)
T 3eyt_A 27 RGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPVGVDQP-GDGA 105 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECC-CSSS
T ss_pred CCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEecccccccCCHHHHHHHHHHcCCCceEEEcCc-cchh
Confidence 57999999999999999995 999999999998667999999864 11 2
Q ss_pred --HHHHHhcCCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 250 --EYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 250 --~l~~~~~~V~~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
.++ +.|+|.++|++++++..+++...+.| ..+.++|.+.|+++
T Consensus 106 ~~~~~-~~~~v~~~P~~~lid~~G~i~~~~~g-~~~~~~l~~~i~~l 150 (158)
T 3eyt_A 106 MPRTM-AAYQMRGTPSLLLIDKAGDLRAHHFG-DVSELLLGAEIATL 150 (158)
T ss_dssp SCHHH-HHTTCCSSSEEEEECTTSEEEEEEES-CCCHHHHHHHHHHH
T ss_pred hHHHH-HHcCCCCCCEEEEECCCCCEEEEEeC-CCCHHHHHHHHHHH
Confidence 578 89999999999999766655566666 68999999999875
No 141
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.50 E-value=1e-13 Score=111.30 Aligned_cols=91 Identities=14% Similarity=0.327 Sum_probs=77.1
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCc----------------------HHHHHHhcCCC
Q 022560 202 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ----------------------KEYAKQKLQLG 259 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~----------------------~~l~~~~~~V~ 259 (295)
.++++||+||++||++|+.+.|.+.++.+.+.+.++.|+.|+++... ..++ +.|+|.
T Consensus 29 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~v~ 107 (152)
T 2lja_A 29 KGKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTFM-DAYLIN 107 (152)
T ss_dssp TTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHHH-HHTTCC
T ss_pred CCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhHH-HHcCcC
Confidence 57899999999999999999999999999998767999999998761 2688 899999
Q ss_pred CCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 260 SFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 260 ~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
++|++++++..+++...+.| ..+.++|.++|+++
T Consensus 108 ~~P~~~lid~~G~i~~~~~g-~~~~~~l~~~l~~~ 141 (152)
T 2lja_A 108 GIPRFILLDRDGKIISANMT-RPSDPKTAEKFNEL 141 (152)
T ss_dssp SSCCEEEECTTSCEEESSCC-CTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCCeEEEccCC-CCCHHHHHHHHHHH
Confidence 99999999854443444555 68889999999875
No 142
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.49 E-value=1.8e-13 Score=109.96 Aligned_cols=90 Identities=18% Similarity=0.256 Sum_probs=76.4
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcC-----------------------CCcHHHHHHhcCC
Q 022560 202 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD-----------------------GDQKEYAKQKLQL 258 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~-----------------------~~~~~l~~~~~~V 258 (295)
.++++||.||++||++|+.+.|.+.++++.+++.++.|+.|+.+ .+ ..++ +.|+|
T Consensus 27 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~-~~~~i 104 (153)
T 2l5o_A 27 QGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDAD-KAVG-QAFGT 104 (153)
T ss_dssp TTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTSCHHHHHHHHHHTTCCSEEEECSS-CHHH-HHHTC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEecCCCCHHHHHHHHHHcCCCceEEcCch-HHHH-HHcCC
Confidence 57899999999999999999999999999998766888887743 34 6788 89999
Q ss_pred CCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 259 GSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 259 ~~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
.++|++++++.++++...+.| ..+.++|.++|+++
T Consensus 105 ~~~P~~~lid~~G~i~~~~~g-~~~~~~l~~~l~~l 139 (153)
T 2l5o_A 105 QVYPTSVLIGKKGEILKTYVG-EPDFGKLYQEIDTA 139 (153)
T ss_dssp CSSSEEEEECSSSCCCEEEES-SCCHHHHHHHHHHH
T ss_pred CccCeEEEECCCCcEEEEEcC-CCCHHHHHHHHHHH
Confidence 999999999655554566776 68999999999875
No 143
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.48 E-value=1.5e-13 Score=109.46 Aligned_cols=88 Identities=16% Similarity=0.248 Sum_probs=73.4
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHh-cCCCeEEEEEEcCCC------------------------cHHHHHHhc
Q 022560 202 RQEPWLVVLYAPWCQFCQAMEGSYVELADKL-AGNGVKVGKFRADGD------------------------QKEYAKQKL 256 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~-~~~~v~~~~vd~~~~------------------------~~~l~~~~~ 256 (295)
+++++||+||++||++|+.+.|.+.++++.+ .+.++.|+.|+++.. +..++ +.|
T Consensus 32 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~ 110 (148)
T 3fkf_A 32 RNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSSETA-KQY 110 (148)
T ss_dssp TTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHH-HHT
T ss_pred CCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcchHHH-Hhc
Confidence 5789999999999999999999999999999 665699999999874 14788 999
Q ss_pred CCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 257 QLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 257 ~V~~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
+|.++|++++++.++++...+ .+.++|.++|+++
T Consensus 111 ~v~~~P~~~lid~~G~i~~~~----~~~~~l~~~l~~l 144 (148)
T 3fkf_A 111 AILTLPTNILLSPTGKILARD----IQGEALTGKLKEL 144 (148)
T ss_dssp TCCSSSEEEEECTTSBEEEES----CCHHHHHHHHHHH
T ss_pred CCCCcCEEEEECCCCeEEEec----CCHHHHHHHHHHH
Confidence 999999999996555423322 2788899888875
No 144
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.48 E-value=1.4e-13 Score=118.63 Aligned_cols=99 Identities=19% Similarity=0.310 Sum_probs=79.3
Q ss_pred ccHHHHHhhcCCCCcEEEEEE-----CCCChhHHHHHHHHHHHHHHhcC-CCeEEEEEEcCCCcHHHHHHhcCCCCCCeE
Q 022560 191 TGMENLARLDHRQEPWLVVLY-----APWCQFCQAMEGSYVELADKLAG-NGVKVGKFRADGDQKEYAKQKLQLGSFPTI 264 (295)
Q Consensus 191 ~~f~~~i~~~~~~k~vvV~Fy-----a~wC~~C~~~~p~~~~la~~~~~-~~v~~~~vd~~~~~~~l~~~~~~V~~~Pti 264 (295)
+++.+++. .+..++|+|.|| +|||++|+.+.|.+.++++.+.+ .++.|++||++++ ++++ ++|+|+++||+
T Consensus 9 ~~l~~~~~-~~~~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~vd~~~~-~~l~-~~~~v~~~Ptl 85 (229)
T 2ywm_A 9 MQLKELAQ-KEFKEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQDKIKLDIYSPFTH-KEET-EKYGVDRVPTI 85 (229)
T ss_dssp HHHHHHHH-HHCCSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTTTEEEEEECTTTC-HHHH-HHTTCCBSSEE
T ss_pred HHHHHHHH-HhccCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCccc-HHHH-HHcCCCcCcEE
Confidence 44555551 024566776666 89999999999999999988832 3799999999998 9999 99999999999
Q ss_pred EEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 265 LFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 265 ~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
++|++|+ ....|.| ..+.++|.+|+.++
T Consensus 86 ~~~~~~~-~~~~~~G-~~~~~~l~~~~~~~ 113 (229)
T 2ywm_A 86 VIEGDKD-YGIRYIG-LPAGLEFTTLINGI 113 (229)
T ss_dssp EEESSSC-CCEEEES-CCCTTHHHHHHHHH
T ss_pred EEECCCc-ccceecC-CccHHHHHHHHHHH
Confidence 9998544 3778888 68888899988753
No 145
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.46 E-value=3.1e-13 Score=108.86 Aligned_cols=88 Identities=16% Similarity=0.247 Sum_probs=71.4
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCC------------------------cHHHHHHhcC
Q 022560 202 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD------------------------QKEYAKQKLQ 257 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~------------------------~~~l~~~~~~ 257 (295)
+++++||+||++||++|+.+.|.+.++++.+++.++.|+.|+++.. ...++ +.|+
T Consensus 28 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~~ 106 (152)
T 2lrn_A 28 KGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDVL-ESYC 106 (152)
T ss_dssp TTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHHH-HHTT
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHHH-HHhC
Confidence 5789999999999999999999999999999886799999999872 26788 8999
Q ss_pred CCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 258 LGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 258 V~~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
|.++|++++++.++++...+. +.++|.++|+++
T Consensus 107 v~~~P~~~lid~~G~i~~~~~----~~~~l~~~l~~l 139 (152)
T 2lrn_A 107 IVGFPHIILVDPEGKIVAKEL----RGDDLYNTVEKF 139 (152)
T ss_dssp CCSSCEEEEECTTSEEEEECC----CTTHHHHHHHHH
T ss_pred CCcCCeEEEECCCCeEEEeeC----CHHHHHHHHHHH
Confidence 999999999965554344433 335677666654
No 146
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.46 E-value=4.2e-13 Score=107.65 Aligned_cols=92 Identities=14% Similarity=0.212 Sum_probs=77.0
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcH----------------------HHHHHhcCCC
Q 022560 202 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQK----------------------EYAKQKLQLG 259 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~----------------------~l~~~~~~V~ 259 (295)
.++++||+||++||++|+.+.|.+.++++.+++.++.|+.|+++.. . .++ +.|+|.
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~-~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~v~ 104 (152)
T 3gl3_A 27 TGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAK-TGDAMKFLAQVPAEFTVAFDPKGQTP-RLYGVK 104 (152)
T ss_dssp TTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSS-HHHHHHHHHHSCCCSEEEECTTCHHH-HHTTCC
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCC-HHHHHHHHHHcCCCCceeECCcchhH-HHcCCC
Confidence 5789999999999999999999999999999886699999999876 3 677 889999
Q ss_pred CCCeEEEEeCCCCCeeecCCC-CCCHHHHHHHHHHhC
Q 022560 260 SFPTILFFPKHSSKPIKYPSE-RRDVDSLMAFVDALR 295 (295)
Q Consensus 260 ~~Pti~~~~~g~~~~~~~~gg-~~~~e~l~~fi~~l~ 295 (295)
++|++++++.++++...+.|. ..+.++|.++|++++
T Consensus 105 ~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~i~~~~ 141 (152)
T 3gl3_A 105 GMPTSFLIDRNGKVLLQHVGFRPADKEALEQQILAAL 141 (152)
T ss_dssp SSSEEEEECTTSBEEEEEESCCTTTHHHHHHHHHHHT
T ss_pred CCCeEEEECCCCCEEEEEccCCCcCHHHHHHHHHHHH
Confidence 999999997666545555552 246689999998753
No 147
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.46 E-value=4.7e-13 Score=111.26 Aligned_cols=90 Identities=13% Similarity=0.299 Sum_probs=74.8
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCe------EEEEEEcCC-CcHHHHHHhc------------------
Q 022560 202 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGV------KVGKFRADG-DQKEYAKQKL------------------ 256 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v------~~~~vd~~~-~~~~l~~~~~------------------ 256 (295)
+++++||+||++||++|+.+.|.|.++++.|++.++ .|+.|+++. . .+.. ++|
T Consensus 58 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~~-~~~~-~~~~~~~~~~~~~~~d~~~~~ 135 (183)
T 3lwa_A 58 ENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDYS-RDIA-QDFVTDNGLDYPSIYDPPFMT 135 (183)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCCC-HHHH-HHHHHHTTCCSCEEECTTCGG
T ss_pred CCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCCC-HHHH-HHHHHHcCCCccEEECCcchH
Confidence 579999999999999999999999999999987557 999999998 4 5555 444
Q ss_pred -------CCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 257 -------QLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 257 -------~V~~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
+|.++|++++++..+++...+.| ..+.++|.++|+++
T Consensus 136 ~~~~~~~~v~~~P~~~lid~~G~i~~~~~g-~~~~~~l~~~l~~l 179 (183)
T 3lwa_A 136 AASLGGVPASVIPTTIVLDKQHRPAAVFLR-EVTSKDVLDVALPL 179 (183)
T ss_dssp GGGTTTCCTTCCSEEEEECTTSCEEEEECS-CCCHHHHHHHHHHH
T ss_pred HHHhccCCCCCCCeEEEECCCCcEEEEEcC-CCCHHHHHHHHHHH
Confidence 68999998888766654566666 68999999999875
No 148
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.46 E-value=2.6e-13 Score=108.06 Aligned_cols=86 Identities=16% Similarity=0.278 Sum_probs=71.5
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHH---HHHHhcCCCeEEEEEEcCCCcHH------------------------HHHH
Q 022560 202 RQEPWLVVLYAPWCQFCQAMEGSYVE---LADKLAGNGVKVGKFRADGDQKE------------------------YAKQ 254 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~C~~~~p~~~~---la~~~~~~~v~~~~vd~~~~~~~------------------------l~~~ 254 (295)
.++++||+|||+||++|+.+.|.+.+ +.+.+++.++.++.|+.+.. .+ +. +
T Consensus 30 ~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~-~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~ 107 (142)
T 3eur_A 30 PAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEE-LDEWKKHRNDFAKEWTNGYDKELVIKNK-N 107 (142)
T ss_dssp CCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSC-HHHHHHHGGGSCTTSEEEECTTCHHHHT-T
T ss_pred CCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCC-HHHHHHHHHhcccccccccCccchhhhh-h
Confidence 47999999999999999999999999 99999776899999999876 32 35 7
Q ss_pred hcCCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHH
Q 022560 255 KLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDA 293 (295)
Q Consensus 255 ~~~V~~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~ 293 (295)
.|+|.++|++++++..+.++. .+ .+.++|.++|++
T Consensus 108 ~~~v~~~P~~~lid~~G~i~~--~~--~~~~~l~~~l~e 142 (142)
T 3eur_A 108 LYDLRAIPTLYLLDKNKTVLL--KD--ATLQKVEQYLAE 142 (142)
T ss_dssp CSCCTTCSEEEEECTTCBEEE--EE--ECHHHHHHHHHC
T ss_pred hcCCCcCCeEEEECCCCcEEe--cC--CCHHHHHHHHhC
Confidence 899999999999987664333 22 457999998864
No 149
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.45 E-value=3.1e-13 Score=107.28 Aligned_cols=87 Identities=17% Similarity=0.386 Sum_probs=71.6
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHH---HHHHhcCCCeEEEEEEcCCCcHHH------------------------HHH
Q 022560 202 RQEPWLVVLYAPWCQFCQAMEGSYVE---LADKLAGNGVKVGKFRADGDQKEY------------------------AKQ 254 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~C~~~~p~~~~---la~~~~~~~v~~~~vd~~~~~~~l------------------------~~~ 254 (295)
+++++||+||++||++|+.+.|.+.+ +.+.+++.++.|+.|+++.. .+. . +
T Consensus 26 ~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~~-~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~ 103 (142)
T 3ewl_A 26 KAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDEN-REEWATKAVYMPQGWIVGWNKAGDIRTR-Q 103 (142)
T ss_dssp CCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSSC-HHHHHHHHTTSCTTCEEEECTTCHHHHT-T
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecCC-HHHHHHHHHHcCCCcceeeCCccchhhH-H
Confidence 57999999999999999999999998 88888776799999999875 332 2 3
Q ss_pred hcCCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 255 KLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 255 ~~~V~~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
.|+|.++|++++++..++ ++ + + ..+.++|.++|+++
T Consensus 104 ~~~v~~~P~~~lid~~G~-i~-~-~-~~~~~~l~~~l~~~ 139 (142)
T 3ewl_A 104 LYDIRATPTIYLLDGRKR-VI-L-K-DTSMEQLIDYLATQ 139 (142)
T ss_dssp CSCCCSSSEEEEECTTCB-EE-E-C-SCCHHHHHHHHHC-
T ss_pred HcCCCCCCeEEEECCCCC-EE-e-c-CCCHHHHHHHHHHH
Confidence 899999999999976553 33 3 3 47899999999875
No 150
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.45 E-value=3.3e-13 Score=108.62 Aligned_cols=85 Identities=19% Similarity=0.350 Sum_probs=74.1
Q ss_pred CcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEc---------------------------CCCcHHHHHHhc
Q 022560 204 EPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRA---------------------------DGDQKEYAKQKL 256 (295)
Q Consensus 204 k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~---------------------------~~~~~~l~~~~~ 256 (295)
+++||+||++||++|+.+.|.+.++++.+ + +.|+.|++ +.. ..++ +.|
T Consensus 31 k~vll~f~~~~C~~C~~~~~~l~~l~~~~-~--v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~-~~~ 105 (154)
T 3ia1_A 31 KPAVIVFWASWCTVCKAEFPGLHRVAEET-G--VPFYVISREPRDTREVVLEYMKTYPRFIPLLASDRDRP-HEVA-ARF 105 (154)
T ss_dssp SSEEEEEECTTCHHHHHHHHHHHHHHHHH-C--CCEEEEECCTTCCHHHHHHHHTTCTTEEECBCCSSCCH-HHHH-TTS
T ss_pred CeEEEEEEcccChhHHHHHHHHHHHHHHc-C--CeEEEEeCCCcccHHHHHHHHHHcCCCcccccccccch-HHHH-HHh
Confidence 89999999999999999999999999999 5 89999998 244 6788 899
Q ss_pred CCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 257 QLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 257 ~V~~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
+|.++|++++++..+++...+.| ..+.++|.++|+++
T Consensus 106 ~v~~~P~~~lid~~G~i~~~~~g-~~~~~~l~~~l~~~ 142 (154)
T 3ia1_A 106 KVLGQPWTFVVDREGKVVALFAG-RAGREALLDALLLA 142 (154)
T ss_dssp SBCSSCEEEEECTTSEEEEEEES-BCCHHHHHHHHHHT
T ss_pred CCCcccEEEEECCCCCEEEEEcC-CCCHHHHHHHHHhc
Confidence 99999999999766655566666 78999999999876
No 151
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.45 E-value=9.9e-13 Score=106.32 Aligned_cols=86 Identities=16% Similarity=0.266 Sum_probs=72.1
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHH-----------------------HHHHhcCC
Q 022560 202 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKE-----------------------YAKQKLQL 258 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~-----------------------l~~~~~~V 258 (295)
.++++||+||++||++|+.+.|.+.++++++++.++.|+.|+++.. .+ +. +.|+|
T Consensus 34 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~-~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~~v 111 (152)
T 2lrt_A 34 KGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQISLDGD-EHFWKTSADNLPWVCVRDANGAYSSYI-SLYNV 111 (152)
T ss_dssp GGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCC-HHHHHHHHTTCSSEEEECSSGGGCHHH-HHHTC
T ss_pred CCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccCC-HHHHHHHHhCCCceEEECCCCcchHHH-HHcCc
Confidence 4789999999999999999999999999999876699999999876 43 77 89999
Q ss_pred CCCCeEEEEeCCCCCeeecCCCCCCHHHHHHH
Q 022560 259 GSFPTILFFPKHSSKPIKYPSERRDVDSLMAF 290 (295)
Q Consensus 259 ~~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~f 290 (295)
.++|++++++..+++...+.| ..+.++...-
T Consensus 112 ~~~P~~~lid~~G~i~~~~~g-~~~~e~~~~~ 142 (152)
T 2lrt_A 112 TNLPSVFLVNRNNELSARGEN-IKDLDEAIKK 142 (152)
T ss_dssp CSCSEEEEEETTTEEEEETTT-CSCHHHHHHH
T ss_pred ccCceEEEECCCCeEEEecCC-HHHHHHHHHH
Confidence 999999999866655666666 5776665543
No 152
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.44 E-value=4.5e-13 Score=107.72 Aligned_cols=93 Identities=18% Similarity=0.295 Sum_probs=76.5
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCc----------------------HHHHHHhcCCC
Q 022560 202 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ----------------------KEYAKQKLQLG 259 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~----------------------~~l~~~~~~V~ 259 (295)
+++++||+||++||++|+.+.|.+.++.+.+.+.++.|+.|+++... ..++ +.|+|.
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~v~ 105 (154)
T 3kcm_A 27 KGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRVG-KLYGTT 105 (154)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTTHHHHHHHHHHHHCCCCCEEECTTCHHH-HHHTCC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCcchHHHHHHHHHcCCCeeEEecCchHHH-HHhCCC
Confidence 57899999999999999999999999999998767999999998741 2377 889999
Q ss_pred CCCeEEEEeCCCCCeeecCCC-CCCHHHHHHHHHHhC
Q 022560 260 SFPTILFFPKHSSKPIKYPSE-RRDVDSLMAFVDALR 295 (295)
Q Consensus 260 ~~Pti~~~~~g~~~~~~~~gg-~~~~e~l~~fi~~l~ 295 (295)
++|++++++.+++....+.|. ..+.++|.++|+++.
T Consensus 106 ~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~l~ 142 (154)
T 3kcm_A 106 GVPETFVIDRHGVILKKVVGAMEWDHPEVIAFLNNEL 142 (154)
T ss_dssp SBCEEEEECTTSBEEEEEESCCCTTSHHHHHHHHTC-
T ss_pred CCCeEEEECCCCcEEEEEcCCCccccHHHHHHHHHHH
Confidence 999998887666545556662 247789999998763
No 153
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.42 E-value=1.9e-12 Score=104.00 Aligned_cols=88 Identities=15% Similarity=0.230 Sum_probs=72.5
Q ss_pred CCCcEEEEEECCCChh--HHHHHHHHHHHHHHh-cCCCeEEEEEEcCCCc------------------------HHHHHH
Q 022560 202 RQEPWLVVLYAPWCQF--CQAMEGSYVELADKL-AGNGVKVGKFRADGDQ------------------------KEYAKQ 254 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~--C~~~~p~~~~la~~~-~~~~v~~~~vd~~~~~------------------------~~l~~~ 254 (295)
+++++||+||++||++ |+.+.|.+.++.+.| ++.++.|+.|+++... ..++ +
T Consensus 32 ~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~ 110 (150)
T 3fw2_A 32 KQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDVDKQQWKDAIKRDTLDWEQVCDFGGLNSEVA-K 110 (150)
T ss_dssp TTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHH-H
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCCCHHHHHHHHHHhCCCceEEEcCcccchHHH-H
Confidence 5789999999999999 999999999999999 6666999999998761 2778 8
Q ss_pred hcCCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 255 KLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 255 ~~~V~~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
.|+|.++|++++++..+++...+ .+.++|.+.|+++
T Consensus 111 ~~~v~~~P~~~lid~~G~i~~~~----~~~~~l~~~l~~l 146 (150)
T 3fw2_A 111 QYSIYKIPANILLSSDGKILAKN----LRGEELKKKIENI 146 (150)
T ss_dssp HTTCCSSSEEEEECTTSBEEEES----CCHHHHHHHHHHH
T ss_pred HcCCCccCeEEEECCCCEEEEcc----CCHHHHHHHHHHH
Confidence 99999999999997655423333 3778888877764
No 154
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.41 E-value=6.9e-13 Score=108.51 Aligned_cols=86 Identities=19% Similarity=0.336 Sum_probs=69.6
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEc-----------------------CCCcHHHHHHhcCC
Q 022560 202 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRA-----------------------DGDQKEYAKQKLQL 258 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~-----------------------~~~~~~l~~~~~~V 258 (295)
+++++||+||++||++|+.+.|.+.++++. ++.|+.|++ +.+ ..++ +.|+|
T Consensus 50 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~----~v~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~-~~~~v 123 (168)
T 2b1k_A 50 QGKPVLLNVWATWCPTCRAEHQYLNQLSAQ----GIRVVGMNYKDDRQKAISWLKELGNPYALSLFDGD-GMLG-LDLGV 123 (168)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHT----TCCEEEEEESCCHHHHHHHHHHHCCCCSEEEEETT-CHHH-HHHTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHC----CCEEEEEECCCChHHHHHHHHHcCCCCceeeECcc-hHHH-HHcCc
Confidence 689999999999999999999999998876 378888874 334 5788 89999
Q ss_pred CCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 259 GSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 259 ~~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
.++|++++++.++++...+.| ..+.++|.++|+++
T Consensus 124 ~~~P~~~lid~~G~i~~~~~g-~~~~~~l~~~l~~~ 158 (168)
T 2b1k_A 124 YGAPETFLIDGNGIIRYRHAG-DLNPRVWEEEIKPL 158 (168)
T ss_dssp CSSSEEEEECTTSBEEEEEES-CCCHHHHHHTTHHH
T ss_pred cccCEEEEECCCCeEEEEEeC-CCCHHHHHHHHHHH
Confidence 999988887655554555666 68899988887764
No 155
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=99.41 E-value=5.2e-13 Score=102.08 Aligned_cols=78 Identities=19% Similarity=0.253 Sum_probs=68.2
Q ss_pred CcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCCCeEEEEeCCCCCeeecCCCCCC
Q 022560 204 EPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRD 283 (295)
Q Consensus 204 k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~Pti~~~~~g~~~~~~~~gg~~~ 283 (295)
.++|++|+++||++|+.+.+.++++++++ ++.|..||++++ +++. .+|+++ +|++++|.+|+ .+ ..| ..+
T Consensus 29 m~~vv~y~~~~C~~C~~a~~~L~~l~~e~---~i~~~~vDId~d-~~l~-~~ygv~-VP~l~~~~dG~--~v-~~g-~~~ 98 (107)
T 2fgx_A 29 PRKLVVYGREGCHLCEEMIASLRVLQKKS---WFELEVINIDGN-EHLT-RLYNDR-VPVLFAVNEDK--EL-CHY-FLD 98 (107)
T ss_dssp CCCEEEEECSSCHHHHHHHHHHHHHHHHS---CCCCEEEETTTC-HHHH-HHSTTS-CSEEEETTTTE--EE-ECS-SCC
T ss_pred ccEEEEEeCCCChhHHHHHHHHHHHHHhc---CCeEEEEECCCC-HHHH-HHhCCC-CceEEEEECCE--EE-Eec-CCC
Confidence 36799999999999999999999999886 389999999998 8999 999997 99999999887 33 345 688
Q ss_pred HHHHHHHH
Q 022560 284 VDSLMAFV 291 (295)
Q Consensus 284 ~e~l~~fi 291 (295)
.++|.++|
T Consensus 99 ~~~L~~~L 106 (107)
T 2fgx_A 99 SDVIGAYL 106 (107)
T ss_dssp CHHHHHHH
T ss_pred HHHHHHHh
Confidence 89999887
No 156
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.40 E-value=7.5e-13 Score=106.50 Aligned_cols=88 Identities=14% Similarity=0.188 Sum_probs=70.7
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCC----------------------cHHHHHHhcCCC
Q 022560 202 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD----------------------QKEYAKQKLQLG 259 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~----------------------~~~l~~~~~~V~ 259 (295)
.++++||+||++||++|+.+.|.+.++++. + ++.|+.|++++. ...++ +.|+|.
T Consensus 41 ~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~--~-~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~v~ 116 (156)
T 1kng_A 41 KGKVSLVNVWASWCVPCHDEAPLLTELGKD--K-RFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRAS-IEWGVY 116 (156)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHTTC--T-TSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTSHHH-HHTTCC
T ss_pred CCCEEEEEEEcccCHhHHHHHHHHHHHHhc--C-CeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchhHHH-HhcCcC
Confidence 478999999999999999999999998776 3 589998886532 14677 889999
Q ss_pred CCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 260 SFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 260 ~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
++|++++++.+++....+.| ..+.++|.++|+++
T Consensus 117 ~~P~~~~id~~G~i~~~~~g-~~~~~~l~~~l~~~ 150 (156)
T 1kng_A 117 GVPETFVVGREGTIVYKLVG-PITPDNLRSVLLPQ 150 (156)
T ss_dssp SSCEEEEECTTSBEEEEEES-CCCHHHHHHTHHHH
T ss_pred ccCeEEEEcCCCCEEEEEeC-CCCHHHHHHHHHHH
Confidence 99988888655554555666 68889998888764
No 157
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.40 E-value=1.3e-12 Score=104.06 Aligned_cols=69 Identities=14% Similarity=0.221 Sum_probs=60.7
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcC-CCeEEEEEEcCCC-----------------------cHHHHHHhcC
Q 022560 202 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAG-NGVKVGKFRADGD-----------------------QKEYAKQKLQ 257 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~-~~v~~~~vd~~~~-----------------------~~~l~~~~~~ 257 (295)
+++++||+||++||++|+.+.|.+.++++.+++ .++.++.|+++.. ...++ ++|+
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~ 105 (144)
T 1i5g_A 27 AGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPFEDRKGMEFLT-TGFD 105 (144)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHH-HHTT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCccccccCchHHHHHHH-HHcC
Confidence 578999999999999999999999999999984 4799999999863 14688 8999
Q ss_pred CCCCCeEEEEe--CCC
Q 022560 258 LGSFPTILFFP--KHS 271 (295)
Q Consensus 258 V~~~Pti~~~~--~g~ 271 (295)
|.++|++++++ +|+
T Consensus 106 v~~~P~~~lid~~~G~ 121 (144)
T 1i5g_A 106 VKSIPTLVGVEADSGN 121 (144)
T ss_dssp CCSSSEEEEEETTTCC
T ss_pred CCCCCEEEEEECCCCc
Confidence 99999999998 444
No 158
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.40 E-value=1.7e-12 Score=105.78 Aligned_cols=88 Identities=16% Similarity=0.274 Sum_probs=74.0
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcC------------------CCc---------------
Q 022560 202 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD------------------GDQ--------------- 248 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~------------------~~~--------------- 248 (295)
+++++||+||++||++|+.+.|.+.++.+.++ ++.|+.|+++ ...
T Consensus 36 ~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~--~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (165)
T 3ha9_A 36 GGDVVILWFMAAWCPSCVYMADLLDRLTEKYR--EISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKFIANYGDPSW 113 (165)
T ss_dssp CSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT--TEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHHHHHHSCTTS
T ss_pred CCCEEEEEEECCCCcchhhhHHHHHHHHHHcC--CcEEEEEEecccccccccccccccCCCCCCHHHHHHHHHHcCCCCe
Confidence 57999999999999999999999999999998 4999999998 330
Q ss_pred ------HHHHHHhcCCCCCCeEEEEeCCCCCeeecCCCCC-CHHHHHHHHHHhC
Q 022560 249 ------KEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERR-DVDSLMAFVDALR 295 (295)
Q Consensus 249 ------~~l~~~~~~V~~~Pti~~~~~g~~~~~~~~gg~~-~~e~l~~fi~~l~ 295 (295)
..++ +.|+|.++|++++++.+++ ++. .| .. +.++|.++|+++.
T Consensus 114 ~~~~d~~~~~-~~~~v~~~P~~~lid~~G~-i~~-~g-~~~~~~~l~~~l~~l~ 163 (165)
T 3ha9_A 114 IMVMDDGSLV-EKFNVRSIDYIVIMDKSSN-VLY-AG-TTPSLGELESVIKSVQ 163 (165)
T ss_dssp EEEECCSHHH-HHTTCCSSSEEEEEETTCC-EEE-EE-ESCCHHHHHHHHHHC-
T ss_pred eEEeChHHHH-HHhCCCCceEEEEEcCCCc-EEE-eC-CCCCHHHHHHHHHHHh
Confidence 2678 8999999999999976554 333 55 67 8999999998863
No 159
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.39 E-value=1.3e-12 Score=104.11 Aligned_cols=88 Identities=13% Similarity=0.107 Sum_probs=71.2
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCc-------------------------HHHHHHhc
Q 022560 202 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ-------------------------KEYAKQKL 256 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~-------------------------~~l~~~~~ 256 (295)
+++++||+||++||++|+.+.|.+.++.+.|++.++.|+.|+++... ..++ +.|
T Consensus 31 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~ 109 (143)
T 4fo5_A 31 LGRYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISMDEKESIFTETVKIDKLDLSTQFHEGLGKESELY-KKY 109 (143)
T ss_dssp SCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECTTGGGSHHH-HHT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccCCHHHHHHHHHHhCCCCceeeecccccchHHH-HHc
Confidence 57899999999999999999999999999998767999999988541 2567 889
Q ss_pred CCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 257 QLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 257 ~V~~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
+|.++|++++++..++ ++.. . ...++|.++|+++
T Consensus 110 ~v~~~P~~~lid~~G~-i~~~-~--~~~~~l~~~l~~i 143 (143)
T 4fo5_A 110 DLRKGFKNFLINDEGV-IIAA-N--VTPEKLTEILKAI 143 (143)
T ss_dssp TGGGCCCEEEECTTSB-EEEE-S--CCHHHHHHHHTC-
T ss_pred CCCCCCcEEEECCCCE-EEEc-c--CCHHHHHHHHHhC
Confidence 9999999999986554 3332 2 4578888888654
No 160
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=99.38 E-value=7.8e-13 Score=97.44 Aligned_cols=73 Identities=18% Similarity=0.209 Sum_probs=61.8
Q ss_pred EEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCCCeEEEEeCCCCCeeecCCCCCCHHH
Q 022560 207 LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDS 286 (295)
Q Consensus 207 vV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~Pti~~~~~g~~~~~~~~gg~~~~e~ 286 (295)
|++||++||++|+.+.|.|++++..+ +.+||++++ +++. .+|+++ +|++++ .+|+ .+. | ..+.++
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~------~~~vdid~~-~~l~-~~~g~~-vPtl~~-~~G~--~v~--g-~~~~~~ 67 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA------FFSVFIDDD-AALE-SAYGLR-VPVLRD-PMGR--ELD--W-PFDAPR 67 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC------EEEEECTTC-HHHH-HHHTTT-CSEEEC-TTCC--EEE--S-CCCHHH
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh------eEEEECCCC-HHHH-HHhCCC-cCeEEE-ECCE--EEe--C-CCCHHH
Confidence 78999999999999999998875332 689999998 8999 999998 999999 7776 343 5 689999
Q ss_pred HHHHHHHh
Q 022560 287 LMAFVDAL 294 (295)
Q Consensus 287 l~~fi~~l 294 (295)
|.++|+++
T Consensus 68 L~~~l~~~ 75 (87)
T 1ttz_A 68 LRAWLDAA 75 (87)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHHH
Confidence 99999764
No 161
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.37 E-value=2.6e-12 Score=107.74 Aligned_cols=91 Identities=18% Similarity=0.307 Sum_probs=73.9
Q ss_pred CCC-cEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCC----------------------------CcHHHH
Q 022560 202 RQE-PWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG----------------------------DQKEYA 252 (295)
Q Consensus 202 ~~k-~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~----------------------------~~~~l~ 252 (295)
.++ ++||+||++||++|+.+.|.+.++.+++.+.++.|+.|+++. .+..++
T Consensus 44 ~gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~ 123 (196)
T 2ywi_A 44 KSDAATVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAINSNDAEQYPEDSPENMKKVAEELGYPFPYLYDETQEVA 123 (196)
T ss_dssp CCSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSCHHH
T ss_pred CCCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCccccccccCHHHHHHHHHHcCCCceEEECCchHHH
Confidence 456 599999999999999999999999999987569999999842 125788
Q ss_pred HHhcCCCCCCeEEEEeCCCCCeee---------cCCCCCCHHHHHHHHHHh
Q 022560 253 KQKLQLGSFPTILFFPKHSSKPIK---------YPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 253 ~~~~~V~~~Pti~~~~~g~~~~~~---------~~gg~~~~e~l~~fi~~l 294 (295)
+.|+|.++|++++++..+++... +.| ..+.++|.+.|+++
T Consensus 124 -~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~~~g-~~~~~~l~~~i~~l 172 (196)
T 2ywi_A 124 -KAYDAACTPDFYIFDRDLKCVYRGQLDDSRPNNGI-PVTGESIRAALDAL 172 (196)
T ss_dssp -HHHTCCEESEEEEEETTCBEEEEECSSSCCTTTCC-CCCCHHHHHHHHHH
T ss_pred -HHhCCCCCCeEEEEcCCCeEEEccccCcccccccC-ccCHHHHHHHHHHH
Confidence 89999999999999765543433 234 67889999998865
No 162
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.37 E-value=2.9e-12 Score=101.84 Aligned_cols=75 Identities=17% Similarity=0.293 Sum_probs=62.6
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcC-CCeEEEEEEcCCC-----------------------cHHHHHHhcC
Q 022560 202 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAG-NGVKVGKFRADGD-----------------------QKEYAKQKLQ 257 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~-~~v~~~~vd~~~~-----------------------~~~l~~~~~~ 257 (295)
+++++||+||++||++|+.+.|.+.++++.+++ .++.++.|+++.. ...++ ++|+
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 105 (144)
T 1o73_A 27 VGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELG-KTFG 105 (144)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHH-HHHT
T ss_pred CCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHHHH-HHcC
Confidence 578999999999999999999999999999983 4799999998864 14678 8999
Q ss_pred CCCCCeEEEEe-CCCCCeeecC
Q 022560 258 LGSFPTILFFP-KHSSKPIKYP 278 (295)
Q Consensus 258 V~~~Pti~~~~-~g~~~~~~~~ 278 (295)
|.++||+++++ .+++ ++...
T Consensus 106 v~~~Pt~~lid~~~G~-i~~~~ 126 (144)
T 1o73_A 106 VESIPTLITINADTGA-IIGTQ 126 (144)
T ss_dssp CCSSSEEEEEETTTCC-EEESC
T ss_pred CCCCCEEEEEECCCCe-EEecc
Confidence 99999999999 3332 44443
No 163
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.37 E-value=2.9e-12 Score=102.42 Aligned_cols=69 Identities=16% Similarity=0.288 Sum_probs=60.6
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcC-CCeEEEEEEcCCC-----------------------cHHHHHHhcC
Q 022560 202 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAG-NGVKVGKFRADGD-----------------------QKEYAKQKLQ 257 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~-~~v~~~~vd~~~~-----------------------~~~l~~~~~~ 257 (295)
+++++||+||++||++|+.+.|.+.++++.+++ .++.++.|+++.. ...++ ++|+
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~ 105 (146)
T 1o8x_A 27 AGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLS-KHFN 105 (146)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHHHH-HHTT
T ss_pred CCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHHHHH-HHhC
Confidence 578999999999999999999999999999984 4799999998863 14678 8999
Q ss_pred CCCCCeEEEEe--CCC
Q 022560 258 LGSFPTILFFP--KHS 271 (295)
Q Consensus 258 V~~~Pti~~~~--~g~ 271 (295)
|.++||+++++ +|+
T Consensus 106 v~~~Pt~~lid~~~G~ 121 (146)
T 1o8x_A 106 VESIPTLIGVDADSGD 121 (146)
T ss_dssp CCSSSEEEEEETTTCC
T ss_pred CCCCCEEEEEECCCCe
Confidence 99999999998 454
No 164
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.36 E-value=3.1e-12 Score=106.07 Aligned_cols=87 Identities=20% Similarity=0.303 Sum_probs=70.6
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCC----------------------cHHHHHHhcCCC
Q 022560 202 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD----------------------QKEYAKQKLQLG 259 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~----------------------~~~l~~~~~~V~ 259 (295)
.++++||+||++||++|+.+.|.+.++++. ++.|+.|++++. +..++ +.|+|.
T Consensus 57 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~----~v~vv~vs~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~v~ 131 (176)
T 3kh7_A 57 KGKPALVNVWGTWCPSCRVEHPELTRLAEQ----GVVIYGINYKDDNAAAIKWLNELHNPYLLSISDADGTLG-LDLGVY 131 (176)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHT----TCEEEEEEESCCHHHHHHHHHHTTCCCSEEEEETTCHHH-HHHTCC
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHC----CCEEEEEeCCCCHHHHHHHHHHcCCCCceEEECCcchHH-HHcCCC
Confidence 579999999999999999999999998876 488888886332 15677 889999
Q ss_pred CCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 260 SFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 260 ~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
++|++++++..+++...+.| ..+.++|.++|+++
T Consensus 132 ~~P~~~lid~~G~i~~~~~g-~~~~~~l~~~l~~~ 165 (176)
T 3kh7_A 132 GAPETYLIDKQGIIRHKIVG-VVDQKVWREQLAPL 165 (176)
T ss_dssp SSCEEEEECTTCBEEEEEES-CCCHHHHHHHTHHH
T ss_pred CCCeEEEECCCCeEEEEEcC-CCCHHHHHHHHHHH
Confidence 99999999766665566666 68888888877654
No 165
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.35 E-value=4.3e-12 Score=116.70 Aligned_cols=106 Identities=9% Similarity=0.167 Sum_probs=89.6
Q ss_pred CCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcC--CCcHHHHHHhcCCCC
Q 022560 183 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD--GDQKEYAKQKLQLGS 260 (295)
Q Consensus 183 ~~v~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~--~~~~~l~~~~~~V~~ 260 (295)
+.|.+++.+++..++. ...++++|+||++||++|+.+.|.|.++++.+++ .+.|+.||++ ++ ..++ +.|+|.+
T Consensus 117 p~v~~~~~~~~~~~~~--~~~~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~-~i~f~~vd~~~~~~-~~~~-~~fgi~~ 191 (361)
T 3uem_A 117 PLVIEFTEQTAPKIFG--GEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKG-KILFIFIDSDHTDN-QRIL-EFFGLKK 191 (361)
T ss_dssp CSEEECSTTTHHHHHS--CSCCEEEEEECCSSSSSHHHHHHHHHHHHGGGTT-TCEEEEECTTSGGG-HHHH-HHTTCCT
T ss_pred CcceecCcccHHHHhc--CCCCcEEEEEEeCCchhHHHHHHHHHHHHHHccC-ceEEEEecCChHHH-HHHH-HHcCCCc
Confidence 5688999999998875 2345789999999999999999999999999998 7999999999 56 8999 9999988
Q ss_pred --CCeEEEEeCCCCCeeecC--CCCCCHHHHHHHHHHh
Q 022560 261 --FPTILFFPKHSSKPIKYP--SERRDVDSLMAFVDAL 294 (295)
Q Consensus 261 --~Pti~~~~~g~~~~~~~~--gg~~~~e~l~~fi~~l 294 (295)
+|++++|..++. ...|. ++..+.++|.+|++++
T Consensus 192 ~~~P~~~~~~~~~~-~~ky~~~~~~~~~~~l~~fi~~~ 228 (361)
T 3uem_A 192 EECPAVRLITLEEE-MTKYKPESEELTAERITEFCHRF 228 (361)
T ss_dssp TTCSEEEEEECC---CCEECCSSCCCCHHHHHHHHHHH
T ss_pred cCCccEEEEEcCCc-ccccCCCccccCHHHHHHHHHHH
Confidence 999999998653 34444 3479999999999864
No 166
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.33 E-value=4.6e-12 Score=116.68 Aligned_cols=91 Identities=14% Similarity=0.109 Sum_probs=77.1
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCC--------------------------CcHHHHHHh
Q 022560 202 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG--------------------------DQKEYAKQK 255 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~--------------------------~~~~l~~~~ 255 (295)
++++|||+||++||++|+.+.|.|.+++++|++.++.|+.|+++. .+..++ +.
T Consensus 81 ~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~D~~~~l~-~~ 159 (352)
T 2hyx_A 81 RGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIALDNNYATW-TN 159 (352)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEECTTSHHH-HH
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECCcccccCCHHHHHHHHHHcCCCccEEeCCcHHHH-HH
Confidence 579999999999999999999999999999987669999998753 114678 89
Q ss_pred cCCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 256 LQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 256 ~~V~~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
|+|.++|++++++..++++..+.| ..+.++|.++|+++
T Consensus 160 ygV~~~Pt~~lID~~G~Iv~~~~G-~~~~~~l~~~I~~l 197 (352)
T 2hyx_A 160 YRNRYWPAEYLIDATGTVRHIKFG-EGDYNVTETLVRQL 197 (352)
T ss_dssp TTCCEESEEEEECTTSBEEEEEES-BCCHHHHHHHHHHH
T ss_pred cCCCccCEEEEEeCCCeEEEEEcC-CCCHHHHHHHHHHH
Confidence 999999999999766655666666 68899999998875
No 167
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.33 E-value=7.2e-12 Score=102.82 Aligned_cols=74 Identities=16% Similarity=0.329 Sum_probs=63.3
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcC-CCeEEEEEEcCCCc-----------------------HHHHHHhcC
Q 022560 202 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAG-NGVKVGKFRADGDQ-----------------------KEYAKQKLQ 257 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~-~~v~~~~vd~~~~~-----------------------~~l~~~~~~ 257 (295)
+++++||+|||+||++|+.+.|.+.++++.|++ .++.|+.|+++... ..++ +.|+
T Consensus 47 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~ 125 (165)
T 3s9f_A 47 SGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVEALT-KKYS 125 (165)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHHHHH-HHTT
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHHHHH-HHcC
Confidence 579999999999999999999999999999986 57999999988761 4677 8999
Q ss_pred CCCCCeEEEEeCC-CCCeeec
Q 022560 258 LGSFPTILFFPKH-SSKPIKY 277 (295)
Q Consensus 258 V~~~Pti~~~~~g-~~~~~~~ 277 (295)
|.++|++++++.. ++ ++..
T Consensus 126 v~~~Pt~~lid~~~G~-iv~~ 145 (165)
T 3s9f_A 126 VESIPTLIGLNADTGD-TVTT 145 (165)
T ss_dssp CCSSSEEEEEETTTCC-EEES
T ss_pred CCCCCEEEEEeCCCCE-EEec
Confidence 9999999999854 43 4443
No 168
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.32 E-value=1e-11 Score=103.33 Aligned_cols=91 Identities=22% Similarity=0.388 Sum_probs=73.4
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCc----HHHHHHhcCCC------------------
Q 022560 202 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ----KEYAKQKLQLG------------------ 259 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~----~~l~~~~~~V~------------------ 259 (295)
+++++||+||++||++|+.+.|.+.++.+.+++.++.|+.|+++... ..+. +++++.
T Consensus 59 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~~ 137 (186)
T 1jfu_A 59 RGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDPEKPKTFL-KEANLTRLGYFNDQKAKVFQDLKA 137 (186)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCSCTTHHHHHH-HHTTCCTTCCEECTTCHHHHHHHT
T ss_pred CCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCCCCHHHHHHHH-HHcCCCCCceEECCcchHHHHhcc
Confidence 57899999999999999999999999999998557999999988641 3555 666664
Q ss_pred -----CCCeEEEEeCCCCCeeecCCCCC--CHHHHHHHHHHh
Q 022560 260 -----SFPTILFFPKHSSKPIKYPSERR--DVDSLMAFVDAL 294 (295)
Q Consensus 260 -----~~Pti~~~~~g~~~~~~~~gg~~--~~e~l~~fi~~l 294 (295)
++|++++++..+++...+.| .. +.++|.++|+++
T Consensus 138 ~~~~~~~P~~~lid~~G~i~~~~~g-~~~~~~~~l~~~l~~l 178 (186)
T 1jfu_A 138 IGRALGMPTSVLVDPQGCEIATIAG-PAEWASEDALKLIRAA 178 (186)
T ss_dssp TTCCSSSSEEEEECTTSBEEEEEES-CCCTTSHHHHHHHHHH
T ss_pred ccccCCCCEEEEECCCCCEEEEEec-CCccCHHHHHHHHHHH
Confidence 89999999766655556666 33 478899998875
No 169
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=99.32 E-value=1.7e-11 Score=99.84 Aligned_cols=101 Identities=15% Similarity=0.247 Sum_probs=77.5
Q ss_pred cccHHHHHhhc-CCCCcEEEEEECCCChhHHHHHHHH---HHHHHHhcCCCeEEEEEEcCCC-cHHHHHHhcCCCCCCeE
Q 022560 190 RTGMENLARLD-HRQEPWLVVLYAPWCQFCQAMEGSY---VELADKLAGNGVKVGKFRADGD-QKEYAKQKLQLGSFPTI 264 (295)
Q Consensus 190 ~~~f~~~i~~~-~~~k~vvV~Fya~wC~~C~~~~p~~---~~la~~~~~~~v~~~~vd~~~~-~~~l~~~~~~V~~~Pti 264 (295)
..+|++.+... .++|+|||+||++||..|+.|...+ .++++.+.. ++.++++|.+.. ...+. ++|++.++|++
T Consensus 28 ~~~~~~Al~~Ak~~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~-~fv~v~~d~~~~~~~~l~-~~y~v~~~P~~ 105 (153)
T 2dlx_A 28 KGSFETAKECGQMQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIRE-HFIFWQVYHDSEEGQRYI-QFYKLGDFPYV 105 (153)
T ss_dssp CSCHHHHHHHHHHHTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHH-TEEEEEEESSSHHHHHHH-HHHTCCSSSEE
T ss_pred ccCHHHHHHHHHHcCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHc-CeEEEEEecCCHhHHHHH-HHcCCCCCCEE
Confidence 35777766543 3589999999999999999998766 556666654 699999999764 24677 89999999999
Q ss_pred EEEeCC-CCCeeecCCCCCCHHHHHHHHHHh
Q 022560 265 LFFPKH-SSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 265 ~~~~~g-~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
+|++.. ++.+... +| .++++|.++|+++
T Consensus 106 ~fld~~~G~~l~~~-~g-~~~~~fl~~L~~~ 134 (153)
T 2dlx_A 106 SILDPRTGQKLVEW-HQ-LDVSSFLDQVTGF 134 (153)
T ss_dssp EEECTTTCCCCEEE-SS-CCHHHHHHHHHHH
T ss_pred EEEeCCCCcEeeec-CC-CCHHHHHHHHHHH
Confidence 999764 4334444 54 8999999988764
No 170
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.30 E-value=6.7e-12 Score=104.65 Aligned_cols=88 Identities=20% Similarity=0.308 Sum_probs=71.3
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcC-----------------------------CCcHHHH
Q 022560 202 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD-----------------------------GDQKEYA 252 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~-----------------------------~~~~~l~ 252 (295)
.++++||+||++||++|+.+.|.+.++.+++.+. +.|+.|+++ .+ ..++
T Consensus 32 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~-~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~-~~~~ 109 (188)
T 2cvb_A 32 HEPLLAVVFMCNHCPYVKGSIGELVALAERYRGK-VAFVGINANDYEKYPEDAPEKMAAFAEEHGIFFPYLLDET-QEVA 109 (188)
T ss_dssp CSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTT-EEEEEEECCCTTTCGGGSHHHHHHHHHHHTCCSCEEECSS-SHHH
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhhcC-eEEEEEEcCccccccccCHHHHHHHHHHhCCCceEEECCc-chHH
Confidence 5799999999999999999999999999999885 999999984 23 5788
Q ss_pred HHhcCCCCCCeEEEEeCCCCCeeecCCC---------CCCHHHHHHHHHHh
Q 022560 253 KQKLQLGSFPTILFFPKHSSKPIKYPSE---------RRDVDSLMAFVDAL 294 (295)
Q Consensus 253 ~~~~~V~~~Pti~~~~~g~~~~~~~~gg---------~~~~e~l~~fi~~l 294 (295)
+.|+|.++|++++++..++ ++.. |. ..+.++|.+.|+++
T Consensus 110 -~~~~v~~~P~~~lid~~G~-i~~~-g~~~~~~~~~g~~~~~~l~~~i~~l 157 (188)
T 2cvb_A 110 -KAYRALRTPEVFLFDERRL-LRYH-GRVNDNPKDPSKVQSHDLEAAIEAL 157 (188)
T ss_dssp -HHTTCCEESEEEEECTTCB-EEEE-ECSSSCTTCGGGCCCCHHHHHHHHH
T ss_pred -HHcCCCCCCeEEEECCCCc-EEEE-EecCCccccccccCHHHHHHHHHHH
Confidence 8999999999999976554 3322 31 23677888888765
No 171
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=98.93 E-value=3.8e-13 Score=109.07 Aligned_cols=89 Identities=10% Similarity=0.112 Sum_probs=67.1
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHH-HHHHhc-CCCeEEEEEEcCCCcHHHHHHh----------------------cC
Q 022560 202 RQEPWLVVLYAPWCQFCQAMEGSYVE-LADKLA-GNGVKVGKFRADGDQKEYAKQK----------------------LQ 257 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~C~~~~p~~~~-la~~~~-~~~v~~~~vd~~~~~~~l~~~~----------------------~~ 257 (295)
+++++||+||++||++|+.+.|.+.+ +.+.+. +.++.++.|++++. .+.. ++ |+
T Consensus 32 ~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~~-~~~~-~~~~~~~~~~~~~~~d~~~~~~~~~~ 109 (159)
T 2ls5_A 32 RGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDEP-LEKV-LAFAKSTGVTYPLGLDPGADIFAKYA 109 (159)
Confidence 57899999999999999999999998 888887 45799999998865 3333 23 33
Q ss_pred --CCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 258 --LGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 258 --V~~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
+.++|++++++..+++...+.| .+.+++.++|+++
T Consensus 110 ~~~~~~P~~~lid~~G~i~~~~~g--~~~~~l~~~l~~l 146 (159)
T 2ls5_A 110 LRDAGITRNVLIDREGKIVKLTRL--YNEEEFASLVQQI 146 (159)
Confidence 5679999999654443444443 5667788777765
No 172
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=99.27 E-value=1.9e-11 Score=104.95 Aligned_cols=91 Identities=18% Similarity=0.298 Sum_probs=72.2
Q ss_pred CCC-cEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcC-----------------------------CCcHHH
Q 022560 202 RQE-PWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD-----------------------------GDQKEY 251 (295)
Q Consensus 202 ~~k-~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~-----------------------------~~~~~l 251 (295)
.++ +|||+||++||++|+.+.|.|.+++++|++.++.|+.|+++ .. ..+
T Consensus 57 ~gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~d~~~~~~~~~~~~~~~~~~l~D~~-~~~ 135 (218)
T 3u5r_E 57 KDSPALLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVVAINSNDAQAFPEETLERVGAEVKAYGYGFPYLKDAS-QSV 135 (218)
T ss_dssp TTCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECTT-CHH
T ss_pred CCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccccCCHHHHHHHHHHhCCCccEEECCc-cHH
Confidence 466 59999999999999999999999999998867999999994 23 578
Q ss_pred HHHhcCCCCCCeEEEEeCCCCCeeec--------CCCCCCHHHHHHHHHHh
Q 022560 252 AKQKLQLGSFPTILFFPKHSSKPIKY--------PSERRDVDSLMAFVDAL 294 (295)
Q Consensus 252 ~~~~~~V~~~Pti~~~~~g~~~~~~~--------~gg~~~~e~l~~fi~~l 294 (295)
+ +.|+|.++|++++++..++++... ..+..+.++|.+.|+++
T Consensus 136 ~-~~~~v~~~P~~~liD~~G~i~~~g~~d~~~~~~~~~~~~~~l~~~i~~l 185 (218)
T 3u5r_E 136 A-KAYGAACTPDFFLYDRERRLVYHGQFDDARPGNGKDVTGADLRAAVDAV 185 (218)
T ss_dssp H-HHHTCCEESEEEEECTTCBEEEEECSSSCCTTSCCCCCCHHHHHHHHHH
T ss_pred H-HHcCCCCCCeEEEECCCCcEEEeccccccccccccccCHHHHHHHHHHH
Confidence 8 899999999999997655422221 11135578888888765
No 173
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.26 E-value=3e-11 Score=98.34 Aligned_cols=92 Identities=12% Similarity=0.064 Sum_probs=72.6
Q ss_pred CCCc-EEEEEE-CCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCC--------------------CcHHHHHHhcCCC
Q 022560 202 RQEP-WLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG--------------------DQKEYAKQKLQLG 259 (295)
Q Consensus 202 ~~k~-vvV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~--------------------~~~~l~~~~~~V~ 259 (295)
.++. +||+|| ++||++|+...|.+.+++++|++.++.|+.|+.+. .+..++ +.|+|.
T Consensus 27 ~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~v~ 105 (161)
T 3drn_A 27 IGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSDDINSHKRFKEKYKLPFILVSDPDKKIR-ELYGAK 105 (161)
T ss_dssp TTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESCCHHHHHHHHHHTTCCSEEEECTTSHHH-HHTTCC
T ss_pred cCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHH-HHcCCC
Confidence 4676 999999 99999999999999999999988679999999873 125788 899999
Q ss_pred C----CCeEEEEeCCCCCeeecCCC---CCCHHHHHHHHHHh
Q 022560 260 S----FPTILFFPKHSSKPIKYPSE---RRDVDSLMAFVDAL 294 (295)
Q Consensus 260 ~----~Pti~~~~~g~~~~~~~~gg---~~~~e~l~~fi~~l 294 (295)
+ +|++++++..+++...+.|. ....+++.+.|+++
T Consensus 106 ~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~il~~l~~l 147 (161)
T 3drn_A 106 GFILPARITFVIDKKGIIRHIYNSQMNPANHVNEALKALKQI 147 (161)
T ss_dssp CSSSCCCEEEEECTTSBEEEEEECSSCTTHHHHHHHHHHHHH
T ss_pred CcCcccceEEEECCCCEEEEEEecCCCCCcCHHHHHHHHHHh
Confidence 9 99999997666545555551 23456666666655
No 174
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=98.88 E-value=7.4e-13 Score=104.99 Aligned_cols=76 Identities=13% Similarity=0.291 Sum_probs=60.5
Q ss_pred CCC-cEEEEEECCCChhHHHHHHHHHHHHHHhcC--CCeEEEEEEcCCCc------------------------HHHHHH
Q 022560 202 RQE-PWLVVLYAPWCQFCQAMEGSYVELADKLAG--NGVKVGKFRADGDQ------------------------KEYAKQ 254 (295)
Q Consensus 202 ~~k-~vvV~Fya~wC~~C~~~~p~~~~la~~~~~--~~v~~~~vd~~~~~------------------------~~l~~~ 254 (295)
+++ ++||+||++||++|+.+.|.+.++++.++. .++.++.|+++... ..++ +
T Consensus 24 ~gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 102 (143)
T 2lus_A 24 KDKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMMESHGDWLAIPYRSGPASNVT-A 102 (143)
Confidence 466 999999999999999999999999999843 36888888877541 2677 8
Q ss_pred hcCCCCCCeEEEEeCCCCCeeecCC
Q 022560 255 KLQLGSFPTILFFPKHSSKPIKYPS 279 (295)
Q Consensus 255 ~~~V~~~Pti~~~~~g~~~~~~~~g 279 (295)
.|+|.++|++++++.+++ ++...|
T Consensus 103 ~~~v~~~P~~~lid~~G~-i~~~~~ 126 (143)
T 2lus_A 103 KYGITGIPALVIVKKDGT-LISMNG 126 (143)
Confidence 999999999999984433 444444
No 175
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.23 E-value=3.4e-11 Score=105.25 Aligned_cols=93 Identities=14% Similarity=0.324 Sum_probs=76.6
Q ss_pred ccHHHHHhhcCCCCcEEEEEECCC--ChhHHHHHHHHHHHHHHh---cCCC--eEEEEEEcCCCcHHHHHHhcCCCCCCe
Q 022560 191 TGMENLARLDHRQEPWLVVLYAPW--CQFCQAMEGSYVELADKL---AGNG--VKVGKFRADGDQKEYAKQKLQLGSFPT 263 (295)
Q Consensus 191 ~~f~~~i~~~~~~k~vvV~Fya~w--C~~C~~~~p~~~~la~~~---~~~~--v~~~~vd~~~~~~~l~~~~~~V~~~Pt 263 (295)
++|.+++. .-+++|+|.||++| |++|+.+.+.+.++++.+ ++ + |.|+.+|++++ .+++ ++|+|+++||
T Consensus 15 ~ql~~~~~--~~~~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~-~~~v~~~~vd~d~~-~~~~-~~~gv~~~Pt 89 (243)
T 2hls_A 15 RELRETLA--EMVNPVEVHVFLSKSGCETCEDTLRLMKLFEEESPTRNG-GKLLKLNVYYRESD-SDKF-SEFKVERVPT 89 (243)
T ss_dssp HHHHHHHT--TCCSCEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEETT-EESEEEEEEETTTT-HHHH-HHTTCCSSSE
T ss_pred HHHHHHHH--hCCCCEEEEEEeCCCCCCchHHHHHHHHHHHHhccCCCC-CceeEEEEecCCcC-HHHH-HhcCCCcCCE
Confidence 56666664 34689999999999 999999999999999884 33 3 99999999998 8999 9999999999
Q ss_pred EEEEeCCCCCeeecCCCCCCHHHHHHHHHH
Q 022560 264 ILFFPKHSSKPIKYPSERRDVDSLMAFVDA 293 (295)
Q Consensus 264 i~~~~~g~~~~~~~~gg~~~~e~l~~fi~~ 293 (295)
+++| +| ...|.| ....+++..|+..
T Consensus 90 ~~i~-~g---~~~~~G-~~~~~~l~~fv~~ 114 (243)
T 2hls_A 90 VAFL-GG---EVRWTG-IPAGEEIRALVEV 114 (243)
T ss_dssp EEET-TT---TEEEES-CCCTTHHHHHHHH
T ss_pred EEEE-CC---ceeEcC-CCcHHHHHHHHHH
Confidence 9999 54 566766 4566777777764
No 176
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=99.21 E-value=6.4e-11 Score=96.75 Aligned_cols=91 Identities=13% Similarity=0.111 Sum_probs=73.2
Q ss_pred CCCcEEEEEECCCChh-HHHHHHHHHHHHHHhcC----CCeEEEEEEcCCC--c-------------------------H
Q 022560 202 RQEPWLVVLYAPWCQF-CQAMEGSYVELADKLAG----NGVKVGKFRADGD--Q-------------------------K 249 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~-C~~~~p~~~~la~~~~~----~~v~~~~vd~~~~--~-------------------------~ 249 (295)
.++++||+||++||++ |+.+.|.+.++.+.++. .++.|+.|+++.. . .
T Consensus 25 ~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~~~~~~~~ 104 (171)
T 2rli_A 25 RGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQDFHPRLLGLTGSTKQVA 104 (171)
T ss_dssp TTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHHHHHTTCTTCCEEECCHHHHH
T ss_pred CCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHH
Confidence 4789999999999998 99999999999999952 3699999998731 0 2
Q ss_pred HHHHHhcCCCCCC---------------eEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 250 EYAKQKLQLGSFP---------------TILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 250 ~l~~~~~~V~~~P---------------ti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
.++ +.|+|..+| ++++++..+++...+.| ..+.++|.+.|+++
T Consensus 105 ~~~-~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g-~~~~~~l~~~l~~l 162 (171)
T 2rli_A 105 QAS-HSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGR-SRSAEQISDSVRRH 162 (171)
T ss_dssp HHH-HHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEEES-SCCHHHHHHHHHHH
T ss_pred HHH-HHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEEECC-CCCHHHHHHHHHHH
Confidence 577 789999888 88888665554555655 68899999988765
No 177
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=99.21 E-value=3.6e-11 Score=97.44 Aligned_cols=91 Identities=9% Similarity=0.104 Sum_probs=73.3
Q ss_pred CCCcEEEEEECCCChh-HHHHHHHHHHHHHHhcC----CCeEEEEEEcCCCc---------------------------H
Q 022560 202 RQEPWLVVLYAPWCQF-CQAMEGSYVELADKLAG----NGVKVGKFRADGDQ---------------------------K 249 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~-C~~~~p~~~~la~~~~~----~~v~~~~vd~~~~~---------------------------~ 249 (295)
.++++||+||++||++ |+...|.+.++.+.+++ .++.++.|+++... .
T Consensus 22 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~ 101 (164)
T 2ggt_A 22 LGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIANYVKEFSPKLVGLTGTREEVD 101 (164)
T ss_dssp TTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHHHHHHHTTCSSCEEEECCHHHHH
T ss_pred CCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHH
Confidence 4789999999999998 99999999999999864 37999999987520 1
Q ss_pred HHHHHhcCCCCCC---------------eEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 250 EYAKQKLQLGSFP---------------TILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 250 ~l~~~~~~V~~~P---------------ti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
.+. +.|+|..+| ++++++..+.+...+.| ..+.++|.+.|+++
T Consensus 102 ~~~-~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g-~~~~~~l~~~l~~l 159 (164)
T 2ggt_A 102 QVA-RAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQ-NKRKGEIAASIATH 159 (164)
T ss_dssp HHH-HTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEEEET-TCCHHHHHHHHHHH
T ss_pred HHH-HhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEEeCC-CCCHHHHHHHHHHH
Confidence 477 889999999 78888765554555555 68899999888765
No 178
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=99.21 E-value=6e-11 Score=99.36 Aligned_cols=92 Identities=15% Similarity=0.238 Sum_probs=71.2
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCC-------CcH---HHH-HH----------------
Q 022560 202 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG-------DQK---EYA-KQ---------------- 254 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~-------~~~---~l~-~~---------------- 254 (295)
+++++||+||++||++|+...|.|.++.++|++.++.|+.|++++ ... .++ ++
T Consensus 47 ~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~D~~~~ 126 (190)
T 2vup_A 47 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPCNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNGE 126 (190)
T ss_dssp TTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCBSSST
T ss_pred CCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcCCeEEEEEEcCccCCCCCCCHHHHHHHHHHhcCCCeEEEeecccCcc
Confidence 578999999999999999999999999999987669999999873 101 111 01
Q ss_pred ------------hcCCCCCC------eEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 255 ------------KLQLGSFP------TILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 255 ------------~~~V~~~P------ti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
.|++.++| ++++++..+++...+.| ..+.++|.+.|+++
T Consensus 127 ~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g-~~~~~~l~~~i~~l 183 (190)
T 2vup_A 127 NAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGVPVERFSP-GASVKDIEKKLIPL 183 (190)
T ss_dssp TBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSCEEEEECT-TCCHHHHHHHHHHH
T ss_pred cccHHHHHHHhhcCCcCCCccccccceEEEECCCCcEEEEECC-CCCHHHHHHHHHHH
Confidence 14778889 88888665554555666 68899999988765
No 179
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=99.19 E-value=7e-11 Score=98.78 Aligned_cols=92 Identities=16% Similarity=0.247 Sum_probs=70.5
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCC-------CcHHHHH--H-h----------------
Q 022560 202 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG-------DQKEYAK--Q-K---------------- 255 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~-------~~~~l~~--~-~---------------- 255 (295)
++++|||+||++||++|+.+.|.|.++.++|++.++.++.|+++. ....+.. + +
T Consensus 45 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 124 (187)
T 3dwv_A 45 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPSNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNGE 124 (187)
T ss_dssp TTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGGTCEEEEEEBCCCSSCSSSBTTHHHHSCCBCCCCSSCBBCCBCCSCC
T ss_pred CCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhCCeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCCceeeccccCCc
Confidence 579999999999999999999999999999988679999998862 1122220 1 1
Q ss_pred ----------------cCCCCCC---eEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 256 ----------------LQLGSFP---TILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 256 ----------------~~V~~~P---ti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
+++..+| ++++++..+.+...+.| ..+.++|.+.|+++
T Consensus 125 ~~~~~~~~l~~~~~~~~~~~~iP~~~~~~liD~~G~i~~~~~g-~~~~~~l~~~i~~l 181 (187)
T 3dwv_A 125 NAHPLYEYMKKTKPGILATKAIKWNFTSFLIDRDGVPVERFSP-GASVKDIEEKLIPL 181 (187)
T ss_dssp -CCHHHHHHHHHSCCSBSSSSCCSTTCEEEECTTSCEEEEECT-TCCHHHHHHHHHHH
T ss_pred chhHHHHHHHhhcCCccCCCccccceeEEEECCCCCEEEEECC-CCCHHHHHHHHHHH
Confidence 1334667 99999766655566666 68999999999875
No 180
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=99.19 E-value=3.3e-11 Score=98.27 Aligned_cols=91 Identities=14% Similarity=0.221 Sum_probs=71.0
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCC-------Cc---HHHHHH-hc--------------
Q 022560 202 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG-------DQ---KEYAKQ-KL-------------- 256 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~-------~~---~~l~~~-~~-------------- 256 (295)
+++++||+||++||++|+.+.|.+.++++++++.++.|+.|+++. .. ..++ + ++
T Consensus 31 ~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~d~~~ 109 (170)
T 2p5q_A 31 KGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCNQFGEEEPGTNDQITDFV-CTRFKSEFPIFDKIDVNG 109 (170)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHH-HHHTCCCSCBBCCCBSSS
T ss_pred CCCEEEEEEEeccCCccHHHHHHHHHHHHHhccCCEEEEEEECCCCCCCCCCCHHHHHHHH-HHhcCCCceeEeeeccCC
Confidence 579999999999999999999999999999987669999999863 11 2333 3 32
Q ss_pred ---------------CC--CCCC---eEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 257 ---------------QL--GSFP---TILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 257 ---------------~V--~~~P---ti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
++ .++| ++++++..+++...+.| ..+.++|.+.|+++
T Consensus 110 ~~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~i~~~~~g-~~~~~~l~~~i~~l 166 (170)
T 2p5q_A 110 ENASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQVVDRYYP-TTSPLSLERDIKQL 166 (170)
T ss_dssp TTBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSCEEEEECT-TSCGGGGHHHHHHH
T ss_pred CchHHHHHHHHhcCCCccCCcccccccEEEECCCCCEEEeeCC-CCCHHHHHHHHHHH
Confidence 34 6688 88888766554556666 67888899888875
No 181
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=99.18 E-value=4e-11 Score=98.56 Aligned_cols=91 Identities=18% Similarity=0.227 Sum_probs=68.7
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCC-------Cc---HHHH-H-----------------
Q 022560 202 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG-------DQ---KEYA-K----------------- 253 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~-------~~---~~l~-~----------------- 253 (295)
+++++||+|||+||++|+ ..|.|.++.+++++.++.|+.|+++. .. ..+. +
T Consensus 31 ~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~d~~~~~~~~~~~~~~~~~p~~~d~d~~~~ 109 (171)
T 3cmi_A 31 KGKVVLIVNVASKCGFTP-QYKELEALYKRYKDEGFTIIGFPCNQFGHQEPGSDEEIAQFCQLNYGVTFPIMKKIDVNGG 109 (171)
T ss_dssp TTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGGTEEEEEEEECSCC------------------CCCSCBBCCCBSSST
T ss_pred CCCEEEEEEEecCCCcch-hHHHHHHHHHHhccCCeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCceEEeeccCCCc
Confidence 579999999999999999 99999999999987669999998741 10 1111 0
Q ss_pred -----------HhcCCCCCC------eEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 254 -----------QKLQLGSFP------TILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 254 -----------~~~~V~~~P------ti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
+.|++.++| ++++++..+++...+.| ..+.++|.+.|+++
T Consensus 110 ~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g-~~~~~~l~~~i~~l 166 (171)
T 3cmi_A 110 NEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDKKGKVYERYSS-LTKPSSLSETIEEL 166 (171)
T ss_dssp TBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECSSSCEEEEECT-TSCGGGGHHHHHHH
T ss_pred cchHHHHHHHhccCCcCCCCcccccceEEEECCCCCEEEEeCC-CCCHHHHHHHHHHH
Confidence 246788999 88888665554556666 67888888888765
No 182
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=99.18 E-value=1.1e-10 Score=95.12 Aligned_cols=91 Identities=15% Similarity=0.216 Sum_probs=69.1
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCC-------Cc---HHH-HHHhc--------------
Q 022560 202 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG-------DQ---KEY-AKQKL-------------- 256 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~-------~~---~~l-~~~~~-------------- 256 (295)
+++++||+||++||++|+...|.+.++.+++++.++.++.|+++. .. ..+ . +++
T Consensus 30 ~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~d~~~ 108 (169)
T 2v1m_A 30 RGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGKGLRILAFPCNQFGGQEPWAEAEIKKFVT-EKYGVQFDMFSKIKVNG 108 (169)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHH-HHHCCCSEEBCCCCCSS
T ss_pred CCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcCCeEEEEEECCccCCCCCCCHHHHHHHHH-HhcCCCCceEEEEeecC
Confidence 579999999999999999999999999999987679999999863 10 112 1 111
Q ss_pred ---------------C-----CCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 257 ---------------Q-----LGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 257 ---------------~-----V~~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
+ |..+|++++++..+++...+.| ..+.++|.+.|+++
T Consensus 109 ~~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g-~~~~~~l~~~i~~l 165 (169)
T 2v1m_A 109 SDADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQPVKRYSP-TTAPYDIEGDIMEL 165 (169)
T ss_dssp TTSCHHHHHHHHHSCCSSSCSCCSTTCEEEECTTSCEEEEECT-TSCGGGGHHHHHHH
T ss_pred ccccHHHHHHHhhcCCccCCcccccceEEEECCCCCEEEEcCC-CCCHHHHHHHHHHH
Confidence 3 4446899999766665666666 67888888888765
No 183
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=99.17 E-value=6.1e-12 Score=112.59 Aligned_cols=72 Identities=18% Similarity=0.311 Sum_probs=57.0
Q ss_pred EEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcC-----CCcHHHHHHhcCCCCCCeEEEEeCCCCCeeecCCC
Q 022560 206 WLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD-----GDQKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSE 280 (295)
Q Consensus 206 vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~-----~~~~~l~~~~~~V~~~Pti~~~~~g~~~~~~~~gg 280 (295)
.+|+|||+||++|++++|.|+++++++ . .+|++ +.+++++ ++|+|+++||+++ +|+ . +.|
T Consensus 200 ~vV~F~A~WC~~Ck~l~p~le~lA~~l-----~--~Vd~d~~d~~~~~~~la-~~~gI~~vPT~~i--~G~--~--~~G- 264 (291)
T 3kp9_A 200 GGTMYGAYWCPHCQDQKELFGAAFDQV-----P--YVECSPNGPGTPQAQEC-TEAGITSYPTWII--NGR--T--YTG- 264 (291)
T ss_dssp TCEEEECTTCHHHHHHHHHHGGGGGGS-----C--EEESCSSCSSSCCCHHH-HTTTCCSTTEEEE--TTE--E--EES-
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHc-----C--EEEEeecCchhhHHHHH-HHcCCcccCeEEE--CCE--E--ecC-
Confidence 479999999999999999999998654 2 34444 2138999 9999999999655 664 2 666
Q ss_pred CCCHHHHHHHHH
Q 022560 281 RRDVDSLMAFVD 292 (295)
Q Consensus 281 ~~~~e~l~~fi~ 292 (295)
.++.++|.+|+.
T Consensus 265 ~~~~~~L~~~l~ 276 (291)
T 3kp9_A 265 VRSLEALAVASG 276 (291)
T ss_dssp CCCHHHHHHHTC
T ss_pred CCCHHHHHHHHC
Confidence 799999999874
No 184
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.16 E-value=7e-11 Score=99.38 Aligned_cols=92 Identities=14% Similarity=0.254 Sum_probs=75.0
Q ss_pred CCCcEEEEEE-CCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCC------------------------cHHHHHHhc
Q 022560 202 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD------------------------QKEYAKQKL 256 (295)
Q Consensus 202 ~~k~vvV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~------------------------~~~l~~~~~ 256 (295)
.++++||+|| ++||++|+...|.+.++.++|++.++.|+.|+++.. +..++ +.|
T Consensus 44 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~ 122 (195)
T 2bmx_A 44 PGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKRELS-QAA 122 (195)
T ss_dssp TTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTTSHHH-HHH
T ss_pred CCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhccccCCceeEEeCCchHHH-HHh
Confidence 4789999999 999999999999999999999876799999998741 24677 889
Q ss_pred CCC-----CCCeEEEEeCCCCCeeecCCC---CCCHHHHHHHHHHh
Q 022560 257 QLG-----SFPTILFFPKHSSKPIKYPSE---RRDVDSLMAFVDAL 294 (295)
Q Consensus 257 ~V~-----~~Pti~~~~~g~~~~~~~~gg---~~~~e~l~~fi~~l 294 (295)
+|. .+|++++++..+++...+.|. ..+.++|.+.|+++
T Consensus 123 ~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l 168 (195)
T 2bmx_A 123 GVLNADGVADRVTFIVDPNNEIQFVSATAGSVGRNVDEVLRVLDAL 168 (195)
T ss_dssp TCBCTTSSBCEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred CCcccCCCccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 999 999999997665544444442 13789999999875
No 185
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=99.16 E-value=8e-11 Score=95.30 Aligned_cols=93 Identities=11% Similarity=0.097 Sum_probs=73.4
Q ss_pred CCC-cEEEEEE-CCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCC----------------------cHHHHHHhcC
Q 022560 202 RQE-PWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD----------------------QKEYAKQKLQ 257 (295)
Q Consensus 202 ~~k-~vvV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~----------------------~~~l~~~~~~ 257 (295)
.++ ++||+|| ++||++|+.+.|.+.++++++++.++.|+.|+++.. +..+. +.|+
T Consensus 34 ~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~~ 112 (160)
T 1xvw_A 34 RGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVGPPPTHKIWATQSGFTFPLLSDFWPHGAVS-QAYG 112 (160)
T ss_dssp TTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTTTTHHH-HHTT
T ss_pred cCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCCCHHHHHHHHHhcCCCceEEecCCcChHHH-HHcC
Confidence 355 8999998 999999999999999999999766799999998741 26788 8999
Q ss_pred CC----CCC--eEEEEeCCCCCeeecCCC---CCCHHHHHHHHHHhC
Q 022560 258 LG----SFP--TILFFPKHSSKPIKYPSE---RRDVDSLMAFVDALR 295 (295)
Q Consensus 258 V~----~~P--ti~~~~~g~~~~~~~~gg---~~~~e~l~~fi~~l~ 295 (295)
+. ++| ++++++..+.+...+.|. ....+++.+.|++++
T Consensus 113 v~~~~~~~p~~~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 159 (160)
T 1xvw_A 113 VFNEQAGIANRGTFVVDRSGIIRFAEMKQPGEVRDQRLWTDALAALT 159 (160)
T ss_dssp CEETTTTEECSEEEEECTTSBEEEEEECCTTCCCCHHHHHHHHHHTC
T ss_pred CccccCCCeeeeEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHhc
Confidence 98 999 788886655545555552 235788888888764
No 186
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=99.15 E-value=3e-11 Score=101.87 Aligned_cols=92 Identities=13% Similarity=0.239 Sum_probs=74.7
Q ss_pred CCCcEEEEEE-CCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCC---------------------------cHHHHH
Q 022560 202 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD---------------------------QKEYAK 253 (295)
Q Consensus 202 ~~k~vvV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~---------------------------~~~l~~ 253 (295)
+++++||+|| ++||++|+.+.|.+.++.+++++.++.|+.|+++.. +..++
T Consensus 32 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~- 110 (198)
T 1zof_A 32 GKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVSFPMVADITKSIS- 110 (198)
T ss_dssp CSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCCCSSCEEECTTSHHH-
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHhhhhcccccCceeEEEECCchHHH-
Confidence 4789999999 999999999999999999999776799999998741 25788
Q ss_pred HhcCCC-----CCCeEEEEeCCCCCeeecCCC---CCCHHHHHHHHHHh
Q 022560 254 QKLQLG-----SFPTILFFPKHSSKPIKYPSE---RRDVDSLMAFVDAL 294 (295)
Q Consensus 254 ~~~~V~-----~~Pti~~~~~g~~~~~~~~gg---~~~~e~l~~fi~~l 294 (295)
+.|+|. .+|++++++..+.+...+.|. ..+.++|.+.|+++
T Consensus 111 ~~~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l 159 (198)
T 1zof_A 111 RDYDVLFEEAIALRGAFLIDKNMKVRHAVINDLPLGRNADEMLRMVDAL 159 (198)
T ss_dssp HHTTCEETTTEECEEEEEEETTTEEEEEEEESSSCCCHHHHHHHHHHHH
T ss_pred HHhCCcccCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 899999 999999998666544444441 13688999998875
No 187
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.15 E-value=1.5e-10 Score=111.98 Aligned_cols=97 Identities=11% Similarity=0.111 Sum_probs=79.9
Q ss_pred ceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCCCeE
Q 022560 185 LVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTI 264 (295)
Q Consensus 185 v~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~Pti 264 (295)
...++++.++.+.. ..++..|+.||++||++|+.+.|.+++++..+. ++.+.+||.+.+ ++++ ++|+|.++||+
T Consensus 101 ~~~~~~~~~~~i~~--~~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~--~v~~~~vd~~~~-~~~~-~~~~i~svPt~ 174 (521)
T 1hyu_A 101 PSKEAQSLLEQIRD--IDGDFEFETYYSLSCHNCPDVVQALNLMAVLNP--RIKHTAIDGGTF-QNEI-TERNVMGVPAV 174 (521)
T ss_dssp CCCSCHHHHHHHHH--CCSCEEEEEEECTTCSSHHHHHHHHHHHHHHCT--TEEEEEEETTTC-HHHH-HHTTCCSSSEE
T ss_pred CCCCCHHHHHHHHh--cCCCcceEEEECCCCcCcHHHHHHHHHHHhHcC--ceEEEEEechhh-HHHH-HHhCCCccCEE
Confidence 34567777777643 235678999999999999999999999998876 499999999999 9999 99999999999
Q ss_pred EEEeCCCCCeeecCCCCCCHHHHHHHHHH
Q 022560 265 LFFPKHSSKPIKYPSERRDVDSLMAFVDA 293 (295)
Q Consensus 265 ~~~~~g~~~~~~~~gg~~~~e~l~~fi~~ 293 (295)
++ +|+ .+.. | ..+.++|.++|.+
T Consensus 175 ~i--~g~--~~~~-G-~~~~~~l~~~l~~ 197 (521)
T 1hyu_A 175 FV--NGK--EFGQ-G-RMTLTEIVAKVDT 197 (521)
T ss_dssp EE--TTE--EEEE-S-CCCHHHHHHHHCC
T ss_pred EE--CCE--EEec-C-CCCHHHHHHHHhh
Confidence 77 665 3333 5 7899999998754
No 188
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=99.14 E-value=1e-10 Score=97.26 Aligned_cols=91 Identities=16% Similarity=0.146 Sum_probs=69.6
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCC-------Cc---HHHHHHhc---------------
Q 022560 202 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG-------DQ---KEYAKQKL--------------- 256 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~-------~~---~~l~~~~~--------------- 256 (295)
+++++||+||++||++|+...|.|.++.++|++.++.|+.|+++. .. ..++ +++
T Consensus 46 ~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~-~~~~~~~p~~~~~d~~~~ 124 (183)
T 2obi_A 46 RGFVCIVTNVASQCGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFA-AGYNVKFDMFSKICVNGD 124 (183)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHH-HTTTCCSEEBCCCCCSST
T ss_pred CCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcCCeEEEEEECCCCCCCCCCCHHHHHHHH-HHcCCCceEEeeeccCCc
Confidence 578999999999999999999999999999987669999998862 10 1122 221
Q ss_pred ----------------C-----CCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 257 ----------------Q-----LGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 257 ----------------~-----V~~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
+ |..+|++++++..+++...+.| ..+.++|.+.|+++
T Consensus 125 ~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g-~~~~~~l~~~i~~l 182 (183)
T 2obi_A 125 DAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGP-MEEPLVIEKDLPHY 182 (183)
T ss_dssp TSCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECTTSCEEEEECT-TSCTHHHHTTSGGG
T ss_pred chhHHHHHhhccCCCCCcccccccccceEEEECCCCCEEEEeCC-CCCHHHHHHHHHHh
Confidence 2 3336999999766655566666 67889999888765
No 189
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=99.14 E-value=6.9e-11 Score=98.25 Aligned_cols=91 Identities=16% Similarity=0.163 Sum_probs=70.3
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCC-------Cc---HHHHHHh-c--------------
Q 022560 202 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG-------DQ---KEYAKQK-L-------------- 256 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~-------~~---~~l~~~~-~-------------- 256 (295)
+++++||+||++||++|+...|.|.+++++|++.++.++.|+++. .. ..++ ++ +
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~-~~~~~~~~p~~~~~d~~g 126 (181)
T 2p31_A 48 RGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEPDSNKEIESFA-RRTYSVSFPMFSKIAVTG 126 (181)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHH-HHHHCCCSCBBCCCCCSS
T ss_pred CCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcCCEEEEEEECcCCCCCCCCCHHHHHHHH-HhhcCCCceeEeecccCC
Confidence 578999999999999999999999999999987669999999863 10 2233 22 2
Q ss_pred ---------CCCCCC-------eEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 257 ---------QLGSFP-------TILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 257 ---------~V~~~P-------ti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
.+..+| ++++++..+++...+.| ..+.++|.+.|+++
T Consensus 127 ~~~~~~~~~~~~~~P~~~~~~~~~~lid~~G~i~~~~~g-~~~~~~l~~~i~~l 179 (181)
T 2p31_A 127 TGAHPAFKYLAQTSGKEPTWNFWKYLVAPDGKVVGAWDP-TVSVEEVRPQITAL 179 (181)
T ss_dssp TTSCHHHHHHHHHHSCCCCSTTCEEEECTTSCEEEEECT-TSCHHHHHHHHHTT
T ss_pred ccchhhhhhhhhcCCCccccceeEEEEcCCCCEEEEeCC-CCCHHHHHHHHHHH
Confidence 244578 77777665554556666 68999999999875
No 190
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=99.14 E-value=4.7e-11 Score=97.51 Aligned_cols=90 Identities=19% Similarity=0.215 Sum_probs=71.7
Q ss_pred CCCcEEEEEECCCChh-HHHHHHHHHHHHHHhcCC---CeEEEEEEcCCC--c-------------------------HH
Q 022560 202 RQEPWLVVLYAPWCQF-CQAMEGSYVELADKLAGN---GVKVGKFRADGD--Q-------------------------KE 250 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~-C~~~~p~~~~la~~~~~~---~v~~~~vd~~~~--~-------------------------~~ 250 (295)
+++++||+||++||++ |+.+.|.+.++.+++++. ++.|+.|+++.. . ..
T Consensus 34 ~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~d~~~~~~~ 113 (172)
T 2k6v_A 34 QDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERDPPEVADRYAKAFHPSFLGLSGSPEAVRE 113 (172)
T ss_dssp TTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTTCCHHHHHHHHHHHCTTEEEECCCHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCCCCCHHHHHHHHHHhCCCcEEEeCCHHHHHH
Confidence 5789999999999997 999999999999988742 699999998742 1 24
Q ss_pred HHHHhcC---------------CCCCCeEEEEeCCCCCeeecCCCCC--CHHHHHHHHHHh
Q 022560 251 YAKQKLQ---------------LGSFPTILFFPKHSSKPIKYPSERR--DVDSLMAFVDAL 294 (295)
Q Consensus 251 l~~~~~~---------------V~~~Pti~~~~~g~~~~~~~~gg~~--~~e~l~~fi~~l 294 (295)
++ +.|+ |.++|++++++ .+++...+.| .. +.++|.+.|+++
T Consensus 114 ~~-~~~gv~~~~~~~~~~~~~~i~~~P~~~lid-~G~i~~~~~g-~~~~~~~~l~~~l~~l 171 (172)
T 2k6v_A 114 AA-QTFGVFYQKSQYRGPGEYLVDHTATTFVVK-EGRLVLLYSP-DKAEATDRVVADLQAL 171 (172)
T ss_dssp HH-HHHTCCEEEEEEEETTEEEEEECCCEEEEE-TTEEEEEECH-HHHTCHHHHHHHHHHC
T ss_pred HH-HhcCeEEEeccCCCCCCceEecCCEEEEEE-CCEEEEEECC-CCCCCHHHHHHHHHHh
Confidence 55 5555 46789999999 5554555665 56 899999999876
No 191
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=99.14 E-value=5.9e-11 Score=99.03 Aligned_cols=92 Identities=16% Similarity=0.160 Sum_probs=74.2
Q ss_pred CCCcEEEEEE-CCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCC------------------------cHHHHHHhc
Q 022560 202 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD------------------------QKEYAKQKL 256 (295)
Q Consensus 202 ~~k~vvV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~------------------------~~~l~~~~~ 256 (295)
.++++||+|| ++||++|+.+.|.|.++++++++.++.++.|+++.. +..++ +.|
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~ 108 (187)
T 1we0_A 30 KGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTDTHFVHKAWHENSPAVGSIEYIMIGDPSQTIS-RQF 108 (187)
T ss_dssp SSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHSCHHHHTCCSEEEECTTCHHH-HHT
T ss_pred CCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHHhccccCCCceEEECCchHHH-HHh
Confidence 4789999999 999999999999999999999865699999998751 25678 889
Q ss_pred CCC------CCCeEEEEeCCCCCeeecCCC---CCCHHHHHHHHHHh
Q 022560 257 QLG------SFPTILFFPKHSSKPIKYPSE---RRDVDSLMAFVDAL 294 (295)
Q Consensus 257 ~V~------~~Pti~~~~~g~~~~~~~~gg---~~~~e~l~~fi~~l 294 (295)
++. .+|++++++..+.+...+.|. ..+.++|.+.|+++
T Consensus 109 ~v~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l 155 (187)
T 1we0_A 109 DVLNEETGLADRGTFIIDPDGVIQAIEINADGIGRDASTLINKVKAA 155 (187)
T ss_dssp TCEETTTTEECEEEEEECTTSBEEEEEEECTTSCCCTTHHHHHHHHH
T ss_pred CCCcCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 998 999999997655544444442 13788898888775
No 192
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=99.13 E-value=1.1e-10 Score=87.99 Aligned_cols=79 Identities=11% Similarity=0.185 Sum_probs=63.9
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcC--CCcHHHHHHhcCCCCCCeEEEEeCCCCCeeecCC
Q 022560 202 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD--GDQKEYAKQKLQLGSFPTILFFPKHSSKPIKYPS 279 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~--~~~~~l~~~~~~V~~~Pti~~~~~g~~~~~~~~g 279 (295)
...++|++|+++||++|+.+.+.|++++ . ++.|..||++ ++ .++. .+|+ .++|++ |.+|+ ... .+
T Consensus 14 ~~~~~v~~f~~~~C~~C~~~~~~L~~l~----~-~i~~~~vdi~~~~~-~el~-~~~g-~~vP~l--~~~g~--~~~-~~ 80 (100)
T 1wjk_A 14 RALPVLTLFTKAPCPLCDEAKEVLQPYK----D-RFILQEVDITLPEN-STWY-ERYK-FDIPVF--HLNGQ--FLM-MH 80 (100)
T ss_dssp CCCCEEEEEECSSCHHHHHHHHHTSTTS----S-SSEEEEEETTSSTT-HHHH-HHSS-SSCSEE--EESSS--EEE-ES
T ss_pred CCCCEEEEEeCCCCcchHHHHHHHHHhh----h-CCeEEEEECCCcch-HHHH-HHHC-CCCCEE--EECCE--EEE-ec
Confidence 4567899999999999999999998764 2 4899999998 66 8898 9999 999986 45666 332 34
Q ss_pred CCCCHHHHHHHHHHh
Q 022560 280 ERRDVDSLMAFVDAL 294 (295)
Q Consensus 280 g~~~~e~l~~fi~~l 294 (295)
..+.++|.++|+++
T Consensus 81 -g~~~~~l~~~l~~~ 94 (100)
T 1wjk_A 81 -RVNTSKLEKQLRKL 94 (100)
T ss_dssp -SCCHHHHHHHHHSS
T ss_pred -CCCHHHHHHHHHHH
Confidence 48899999999764
No 193
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=99.12 E-value=1.8e-10 Score=98.31 Aligned_cols=44 Identities=20% Similarity=0.117 Sum_probs=41.0
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcC
Q 022560 202 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD 245 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~ 245 (295)
++++|||+|||+||++|+...|.|++++++|++.++.++.|+++
T Consensus 46 ~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g~~vv~v~~d 89 (208)
T 2f8a_A 46 RGKVLLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVLGFPCN 89 (208)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHccCCCeEEEEEECC
Confidence 57899999999999999999999999999998767999999986
No 194
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=99.09 E-value=2.6e-10 Score=95.99 Aligned_cols=92 Identities=11% Similarity=0.178 Sum_probs=74.3
Q ss_pred CCCcEEEEEE-CCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCC---------------------------cHHHHH
Q 022560 202 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD---------------------------QKEYAK 253 (295)
Q Consensus 202 ~~k~vvV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~---------------------------~~~l~~ 253 (295)
.++++||+|| ++||++|+...|.|.+++++|++.++.|+.|+++.. +..++
T Consensus 33 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~- 111 (197)
T 1qmv_A 33 KGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTRRLS- 111 (197)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTCHHH-
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhCCCCCCceEEEECCcHHHH-
Confidence 4789999999 999999999999999999999876799999998741 14678
Q ss_pred HhcCCC------CCCeEEEEeCCCCCeeecCCC---CCCHHHHHHHHHHh
Q 022560 254 QKLQLG------SFPTILFFPKHSSKPIKYPSE---RRDVDSLMAFVDAL 294 (295)
Q Consensus 254 ~~~~V~------~~Pti~~~~~g~~~~~~~~gg---~~~~e~l~~fi~~l 294 (295)
+.|++. .+|++++++..+.+...+.|. ..+.+++.+.|+++
T Consensus 112 ~~~gv~~~~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~~e~l~~l~~l 161 (197)
T 1qmv_A 112 EDYGVLKTDEGIAYRGLFIIDGKGVLRQITVNDLPVGRSVDEALRLVQAF 161 (197)
T ss_dssp HHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HHcCCccCCCCceeeEEEEECCCCcEEEEEeCCCCCCCCHHHHHHHHHhc
Confidence 889998 799999997666544443331 35789999998876
No 195
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=99.07 E-value=7.6e-11 Score=90.48 Aligned_cols=82 Identities=15% Similarity=0.275 Sum_probs=55.6
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCc----HHHHHHhcCCCCCCeEEEEeCCCCCeeec
Q 022560 202 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ----KEYAKQKLQLGSFPTILFFPKHSSKPIKY 277 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~----~~l~~~~~~V~~~Pti~~~~~g~~~~~~~ 277 (295)
.++.+++ ||++||++|+.+.|.|.++.. .+.++.||.+... ..++ ++|++.++||+ |.+|+. +..+
T Consensus 18 ~~~~vv~-f~a~~C~~C~~~~~~l~~~~~-----~~~~v~v~~~~~~~~~~~~l~-~~~~v~~~Pt~--~~~g~~-v~~~ 87 (116)
T 2e7p_A 18 SSAPVVV-FSKTYCGYCNRVKQLLTQVGA-----SYKVVELDELSDGSQLQSALA-HWTGRGTVPNV--FIGGKQ-IGGC 87 (116)
T ss_dssp TSSSEEE-EECTTCHHHHHHHHHHHHHTC-----CCEEEEGGGSTTHHHHHHHHH-HHHSCCSSCEE--EETTEE-EECH
T ss_pred cCCCEEE-EECCCChhHHHHHHHHHHcCC-----CeEEEEccCCCChHHHHHHHH-HHhCCCCcCEE--EECCEE-ECCh
Confidence 3456666 999999999999999988742 2556555555431 3578 89999999999 456652 3333
Q ss_pred CCCCC---CHHHHHHHHHHh
Q 022560 278 PSERR---DVDSLMAFVDAL 294 (295)
Q Consensus 278 ~gg~~---~~e~l~~fi~~l 294 (295)
.| .. +.++|.++|+++
T Consensus 88 ~~-~~~~~~~~~l~~~l~~~ 106 (116)
T 2e7p_A 88 DT-VVEKHQRNELLPLLQDA 106 (116)
T ss_dssp HH-HHHHHHTTCHHHHHHHT
T ss_pred HH-HHHHHhCChHHHHHHHc
Confidence 32 22 455677777653
No 196
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=99.07 E-value=2.8e-11 Score=87.10 Aligned_cols=61 Identities=18% Similarity=0.285 Sum_probs=47.9
Q ss_pred EEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcC-CCcHHHHHHhcCCCCCCeEEEEeCCC
Q 022560 206 WLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD-GDQKEYAKQKLQLGSFPTILFFPKHS 271 (295)
Q Consensus 206 vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~-~~~~~l~~~~~~V~~~Pti~~~~~g~ 271 (295)
-++.||++||++|+.+.+.++++++.+.. .+.++.||.+ +. .+++ ++|++.++||+++ +|+
T Consensus 3 ~~~~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~~-~~~~-~~~gv~~vPt~~i--~g~ 64 (80)
T 2k8s_A 3 SKAIFYHAGCPVCVSAEQAVANAIDPSKY-TVEIVHLGTDKAR-IAEA-EKAGVKSVPALVI--DGA 64 (80)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHHSCTTTE-EEEEEETTTCSST-HHHH-HHHTCCEEEEEEE--TTE
T ss_pred ceEEEeCCCCCchHHHHHHHHHHHHhcCC-eEEEEEecCChhh-HHHH-HHcCCCcCCEEEE--CCE
Confidence 37889999999999999999998766533 3555555554 34 7888 8999999999987 555
No 197
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=99.06 E-value=2.4e-10 Score=94.79 Aligned_cols=45 Identities=22% Similarity=0.172 Sum_probs=41.7
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCC
Q 022560 202 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG 246 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~ 246 (295)
++++|||+||++||++|+...|.+.++.++|++.++.++.|+++.
T Consensus 37 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~ 81 (180)
T 3kij_A 37 KGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQ 81 (180)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEECCC
T ss_pred CCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccCCeEEEEEECCc
Confidence 578999999999999999999999999999988679999998764
No 198
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=99.05 E-value=4.6e-10 Score=93.51 Aligned_cols=91 Identities=15% Similarity=0.100 Sum_probs=69.5
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCC-------Cc---HHHHHHhcCC-------------
Q 022560 202 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG-------DQ---KEYAKQKLQL------------- 258 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~-------~~---~~l~~~~~~V------------- 258 (295)
+++++||+||++||++|+...|.+.++.+++++.++.++.|+++. .. .+++ +++++
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~d~~~~ 126 (185)
T 2gs3_A 48 RGFVCIVTNVASQGGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFA-AGYNVKFDMFSKICVNGD 126 (185)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHH-HHTTCCSEEBCCCBSSST
T ss_pred CCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcCCeEEEEEECcccCCCCCCCHHHHHHHH-HHcCCCCeeeeeeccCCh
Confidence 578999999999999999999999999999987679999998863 10 2233 33222
Q ss_pred -----------------------CCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 259 -----------------------GSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 259 -----------------------~~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
..+|++++++..+++...+.| ..+.++|.+.|+++
T Consensus 127 ~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g-~~~~~~l~~~i~~l 184 (185)
T 2gs3_A 127 DAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGP-MEEPLVIEKDLPHY 184 (185)
T ss_dssp TBCHHHHHHTTSGGGCCSSSSSCCSSCCEEEECTTSCEEEEECT-TSCGGGGGGGHHHH
T ss_pred hhhHHHHHHHhhcccccccCCcccccceEEEECCCCCEEEeeCC-CCCHHHHHHHHHHh
Confidence 225899999766665666666 67888898888875
No 199
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=99.04 E-value=3.1e-10 Score=96.02 Aligned_cols=92 Identities=13% Similarity=0.233 Sum_probs=74.3
Q ss_pred CCCcEEEEEE-CCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCC---------------------------cHHHHH
Q 022560 202 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD---------------------------QKEYAK 253 (295)
Q Consensus 202 ~~k~vvV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~---------------------------~~~l~~ 253 (295)
.++++||+|| ++||++|+...|.|.+++++|++.++.|+.|+++.. +..++
T Consensus 35 ~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~D~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~- 113 (202)
T 1uul_A 35 KGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMDSEYSHLAWTSIERKRGGLGQMNIPILADKTKCIM- 113 (202)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTCHHH-
T ss_pred CCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCCCCCceeEEECCchHHH-
Confidence 4789999999 999999999999999999999876799999998741 24677
Q ss_pred HhcCCC------CCCeEEEEeCCCCCeeecCCC---CCCHHHHHHHHHHh
Q 022560 254 QKLQLG------SFPTILFFPKHSSKPIKYPSE---RRDVDSLMAFVDAL 294 (295)
Q Consensus 254 ~~~~V~------~~Pti~~~~~g~~~~~~~~gg---~~~~e~l~~fi~~l 294 (295)
+.|++. .+|++++++..+.+...+.|. ..+.++|.+.|+++
T Consensus 114 ~~ygv~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~ell~~l~~l 163 (202)
T 1uul_A 114 KSYGVLKEEDGVAYRGLFIIDPKQNLRQITVNDLPVGRDVDEALRLVKAF 163 (202)
T ss_dssp HHHTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HHcCCccCCCCceeeEEEEECCCCEEEEEEeCCCCCCCCHHHHHHHHHHh
Confidence 889998 999999997666544443331 25679999988876
No 200
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=99.03 E-value=7.3e-10 Score=80.05 Aligned_cols=75 Identities=16% Similarity=0.286 Sum_probs=59.4
Q ss_pred EEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCc---HHHHHHhcC--CCCCCeEEEEeCCCCCeeecCCC
Q 022560 206 WLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ---KEYAKQKLQ--LGSFPTILFFPKHSSKPIKYPSE 280 (295)
Q Consensus 206 vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~---~~l~~~~~~--V~~~Pti~~~~~g~~~~~~~~gg 280 (295)
-|+.|+++||++|+.+.+.|++++..+.+ +.+..+|++++. .++. ++++ +.++|++ |.+|+ .+ ++
T Consensus 2 ~v~~f~~~~C~~C~~~~~~l~~l~~~~~~--i~~~~vdi~~~~~~~~~l~-~~~~~~~~~vP~i--~~~g~--~i---~~ 71 (85)
T 1ego_A 2 QTVIFGRSGCPYCVRAKDLAEKLSNERDD--FQYQYVDIRAEGITKEDLQ-QKAGKPVETVPQI--FVDQQ--HI---GG 71 (85)
T ss_dssp EEEEECCTTSTHHHHHHHHHHHHHHHHSS--CEEEEECHHHHTCCSHHHH-HHTCCCSCCSCEE--EETTE--EE---ES
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHhcCCC--ceEEEEecccChHHHHHHH-HHhCCCCceeCeE--EECCE--EE---EC
Confidence 37889999999999999999999988766 999999987651 3788 8898 9999998 34665 33 22
Q ss_pred CCCHHHHHHHHHH
Q 022560 281 RRDVDSLMAFVDA 293 (295)
Q Consensus 281 ~~~~e~l~~fi~~ 293 (295)
.++|.+++++
T Consensus 72 ---~~~l~~~~~~ 81 (85)
T 1ego_A 72 ---YTDFAAWVKE 81 (85)
T ss_dssp ---SHHHHHHHHH
T ss_pred ---HHHHHHHHHH
Confidence 2678888765
No 201
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=99.03 E-value=4.8e-10 Score=96.38 Aligned_cols=92 Identities=11% Similarity=0.202 Sum_probs=73.8
Q ss_pred CCCcEEEEEE-CCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCC---------------------------cHHHHH
Q 022560 202 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD---------------------------QKEYAK 253 (295)
Q Consensus 202 ~~k~vvV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~---------------------------~~~l~~ 253 (295)
.++++||+|| ++||++|+...|.|.+++++|++.++.|+.|+++.. +..++
T Consensus 55 ~Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~i~- 133 (220)
T 1zye_A 55 KGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQIS- 133 (220)
T ss_dssp TTSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHH-
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHhCCCcCCceEEEECCcHHHH-
Confidence 4689999999 999999999999999999999765799999988641 14678
Q ss_pred HhcCCC------CCCeEEEEeCCCCCeeecCCC---CCCHHHHHHHHHHh
Q 022560 254 QKLQLG------SFPTILFFPKHSSKPIKYPSE---RRDVDSLMAFVDAL 294 (295)
Q Consensus 254 ~~~~V~------~~Pti~~~~~g~~~~~~~~gg---~~~~e~l~~fi~~l 294 (295)
+.|++. .+|++++++..+.+...+.|. ..+.++|.+.|+++
T Consensus 134 ~~ygv~~~~~g~~~P~~~liD~~G~I~~~~~g~~~~~~~~~ell~~l~~l 183 (220)
T 1zye_A 134 RDYGVLLEGPGLALRGLFIIDPNGVIKHLSVNDLPVGRSVEETLRLVKAF 183 (220)
T ss_dssp HHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred HHhCCeecCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHh
Confidence 899998 999999997665533333331 35789999988875
No 202
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=99.02 E-value=3.2e-10 Score=95.01 Aligned_cols=92 Identities=16% Similarity=0.240 Sum_probs=73.4
Q ss_pred CCCcEEEEEE-CCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCC---------------------------cHHHHH
Q 022560 202 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD---------------------------QKEYAK 253 (295)
Q Consensus 202 ~~k~vvV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~---------------------------~~~l~~ 253 (295)
+++++||+|| ++||++|+...|.|.+++++|++.++.|+.|+++.. +..++
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~- 108 (192)
T 2h01_A 30 GKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSVDSKFTHLAWKKTPLSQGGIGNIKHTLISDISKSIA- 108 (192)
T ss_dssp TTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHH-
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhHHhhCCccCCCcCeEECCcHHHH-
Confidence 4789999999 999999999999999999999765799999988741 14678
Q ss_pred HhcCCC-----CCCeEEEEeCCCCCeeecCCC---CCCHHHHHHHHHHh
Q 022560 254 QKLQLG-----SFPTILFFPKHSSKPIKYPSE---RRDVDSLMAFVDAL 294 (295)
Q Consensus 254 ~~~~V~-----~~Pti~~~~~g~~~~~~~~gg---~~~~e~l~~fi~~l 294 (295)
+.|++. .+|++++++..+.+...+.|. ..+.++|.+.|+++
T Consensus 109 ~~~gv~~~~g~~~P~~~liD~~G~i~~~~~g~~~~~~~~~~l~~~l~~l 157 (192)
T 2h01_A 109 RSYDVLFNESVALRAFVLIDKQGVVQHLLVNNLALGRSVDEILRLIDAL 157 (192)
T ss_dssp HHTTCEETTTEECCEEEEECTTSBEEEEEEGGGSSGGGHHHHHHHHHHH
T ss_pred HHhCCcCcCCceeeEEEEEcCCCEEEEEEeCCCCCCCCHHHHHHHHHHH
Confidence 899999 899999997666544444331 24688888888765
No 203
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=99.01 E-value=6.4e-10 Score=95.17 Aligned_cols=92 Identities=14% Similarity=0.208 Sum_probs=73.7
Q ss_pred CCCcEEEEEE-CCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCC---------------------------cHHHHH
Q 022560 202 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD---------------------------QKEYAK 253 (295)
Q Consensus 202 ~~k~vvV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~---------------------------~~~l~~ 253 (295)
+++++||+|| ++||++|+...|.|.+++++|++.++.|+.|++|.. +..++
T Consensus 51 ~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~- 129 (213)
T 2i81_A 51 GKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVDSKYTHLAWKKTPLAKGGIGNIKHTLLSDITKSIS- 129 (213)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHSSCGGGTCCCSCSSEEEECTTSHHH-
T ss_pred CCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCccCCCceEEECCchHHH-
Confidence 4789999999 999999999999999999999765799999987641 14678
Q ss_pred HhcCCC-----CCCeEEEEeCCCCCeeecCCC---CCCHHHHHHHHHHh
Q 022560 254 QKLQLG-----SFPTILFFPKHSSKPIKYPSE---RRDVDSLMAFVDAL 294 (295)
Q Consensus 254 ~~~~V~-----~~Pti~~~~~g~~~~~~~~gg---~~~~e~l~~fi~~l 294 (295)
+.|++. .+|++++++..+.+...+.+. ..+.++|.+.|+++
T Consensus 130 ~~ygv~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~ell~~l~~l 178 (213)
T 2i81_A 130 KDYNVLFDDSVSLRAFVLIDMNGIVQHLLVNNLAIGRSVDEILRIIDAI 178 (213)
T ss_dssp HHTTCEETTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred HHhCCccccCCcccEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 889998 899999998666544443331 25689999988875
No 204
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=98.99 E-value=1.2e-09 Score=93.95 Aligned_cols=92 Identities=13% Similarity=0.247 Sum_probs=73.4
Q ss_pred CCCcEEEEEEC-CCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCC---------------------------cHHHHH
Q 022560 202 RQEPWLVVLYA-PWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD---------------------------QKEYAK 253 (295)
Q Consensus 202 ~~k~vvV~Fya-~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~---------------------------~~~l~~ 253 (295)
+++++||+||+ +||++|+...|.|.++.++|++.++.|+.|+++.. +..+.
T Consensus 68 ~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~- 146 (222)
T 3ztl_A 68 RGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEIS- 146 (222)
T ss_dssp TTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTSCCSCSSCEEECSSSHHH-
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhhccccccceeEEeCCchHHH-
Confidence 57899999996 99999999999999999999876799999998742 13567
Q ss_pred HhcCCC------CCCeEEEEeCCCCCeeecCCC---CCCHHHHHHHHHHh
Q 022560 254 QKLQLG------SFPTILFFPKHSSKPIKYPSE---RRDVDSLMAFVDAL 294 (295)
Q Consensus 254 ~~~~V~------~~Pti~~~~~g~~~~~~~~gg---~~~~e~l~~fi~~l 294 (295)
+.|+|. .+|++++++..+.+...+.+. ....+++++.|+++
T Consensus 147 ~~ygv~~~~~g~~~P~~~lID~~G~I~~~~~g~~~~~~~~~~il~~l~~l 196 (222)
T 3ztl_A 147 KAYGVFDEEDGNAFRGLFIIDPNGILRQITINDKPVGRSVDETLRLLDAF 196 (222)
T ss_dssp HHTTCBCTTTSSBCEEEEEECTTSEEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HHcCCeecCCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHh
Confidence 789998 899999998766544444331 24578888888765
No 205
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=98.98 E-value=3.5e-09 Score=86.27 Aligned_cols=90 Identities=14% Similarity=0.183 Sum_probs=70.7
Q ss_pred CCCcEEEEEECCC-ChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCC----------------------CcHHHHHHhcCC
Q 022560 202 RQEPWLVVLYAPW-CQFCQAMEGSYVELADKLAGNGVKVGKFRADG----------------------DQKEYAKQKLQL 258 (295)
Q Consensus 202 ~~k~vvV~Fya~w-C~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~----------------------~~~~l~~~~~~V 258 (295)
.++++||+||++| |++|+...|.+.++++++ . ++.|+.|+.+. .+..+. +.|++
T Consensus 43 ~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~-~-~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~v 119 (167)
T 2jsy_A 43 KGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL-G-DVNVYTISADLPFAQARWCGANGIDKVETLSDHRDMSFG-EAFGV 119 (167)
T ss_dssp TTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH-S-SCEEEEEECSSGGGTSCCGGGSSCTTEEEEEGGGTCHHH-HHTTC
T ss_pred CCCeEEEEEecCCCCCchHHHHHHHHHHHHHc-C-CCEEEEEECCCHHHHHHHHHhcCCCCceEeeCCchhHHH-HHhCC
Confidence 4789999999999 999999999999999999 4 69999998874 114677 88998
Q ss_pred CC------CCeEEEEeCCCCCeeecCCC----CCCHHHHHHHHHHh
Q 022560 259 GS------FPTILFFPKHSSKPIKYPSE----RRDVDSLMAFVDAL 294 (295)
Q Consensus 259 ~~------~Pti~~~~~g~~~~~~~~gg----~~~~e~l~~fi~~l 294 (295)
.. +|++++++..+.+...+.|. ..+.+++.+.|+++
T Consensus 120 ~~~~~g~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~~l~~~l~~l 165 (167)
T 2jsy_A 120 YIKELRLLARSVFVLDENGKVVYAEYVSEATNHPNYEKPIEAAKAL 165 (167)
T ss_dssp BBTTTCSBCCEEEEECTTSCEEEEEECSBTTSCCCSHHHHHHHHHH
T ss_pred ccccCCceeeEEEEEcCCCcEEEEEecCCcCCCCCHHHHHHHHHHh
Confidence 76 49999998666545555431 23568888888775
No 206
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=98.97 E-value=3e-09 Score=86.24 Aligned_cols=93 Identities=9% Similarity=0.078 Sum_probs=72.2
Q ss_pred CCCcEEEEEEC-CCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCC--------------------cHHHHHHhcCCCC
Q 022560 202 RQEPWLVVLYA-PWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD--------------------QKEYAKQKLQLGS 260 (295)
Q Consensus 202 ~~k~vvV~Fya-~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~--------------------~~~l~~~~~~V~~ 260 (295)
.++++||+||+ +||++|+...|.+.++.++|++.++.++.|+++.. +..+. +.|++..
T Consensus 34 ~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~v~~ 112 (163)
T 3gkn_A 34 AGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRDSVKSHDNFCAKQGFAFPLVSDGDEALC-RAFDVIK 112 (163)
T ss_dssp TTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHCCSSCEEECTTCHHH-HHTTCEE
T ss_pred CCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHH-HHhCCcc
Confidence 46799999998 99999999999999999999876799999988742 13566 7888877
Q ss_pred ------------CCeEEEEeCCCCCeeecCCC--CCCHHHHHHHHHHhC
Q 022560 261 ------------FPTILFFPKHSSKPIKYPSE--RRDVDSLMAFVDALR 295 (295)
Q Consensus 261 ------------~Pti~~~~~g~~~~~~~~gg--~~~~e~l~~fi~~l~ 295 (295)
+|++++++..+.+...+.+. ....+++.+.|++++
T Consensus 113 ~~~~~~~~~~~~~p~~~lid~~G~i~~~~~~~~~~~~~~~il~~l~~l~ 161 (163)
T 3gkn_A 113 EKNMYGKQVLGIERSTFLLSPEGQVVQAWRKVKVAGHADAVLAALKAHA 161 (163)
T ss_dssp EEEETTEEEEEECCEEEEECTTSCEEEEECSCCSTTHHHHHHHHHHHHC
T ss_pred ccccccccccCcceEEEEECCCCeEEEEEcCCCcccCHHHHHHHHHHHh
Confidence 99999998766544444331 234678888887763
No 207
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=98.95 E-value=2.6e-09 Score=87.26 Aligned_cols=92 Identities=17% Similarity=0.300 Sum_probs=69.1
Q ss_pred CCCcEEEEEECCCCh-hHHHHHHHHHHHHHHhcCC--CeEEEEEEcCC---C------------------------cHHH
Q 022560 202 RQEPWLVVLYAPWCQ-FCQAMEGSYVELADKLAGN--GVKVGKFRADG---D------------------------QKEY 251 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~-~C~~~~p~~~~la~~~~~~--~v~~~~vd~~~---~------------------------~~~l 251 (295)
.++++||+||++||+ +|+...|.+.++.+.+++. ++.|+.|+++. . +..+
T Consensus 32 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~d~~~~~~~~~~~~~~~~~~~~~l~d~~~~~ 111 (174)
T 1xzo_A 32 KGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPENDKPKQLKKFAANYPLSFDNWDFLTGYSQSE 111 (174)
T ss_dssp TTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTTSCCCGGGEEEEBCSCHHH
T ss_pred CCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCCcceEEEeCCCHHH
Confidence 578999999999999 9999999999999998763 39999999872 1 0122
Q ss_pred HHHh----------------cCCCCCCeEEEEeCCCCCeeecCCCC-CCHHHHHHHHHHh
Q 022560 252 AKQK----------------LQLGSFPTILFFPKHSSKPIKYPSER-RDVDSLMAFVDAL 294 (295)
Q Consensus 252 ~~~~----------------~~V~~~Pti~~~~~g~~~~~~~~gg~-~~~e~l~~fi~~l 294 (295)
. +. +++..+|++++++..+.+...+.|.. .+.++|.+.|+++
T Consensus 112 ~-~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~l 170 (174)
T 1xzo_A 112 I-EEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKVLKDYNGVENTPYDDIISDVKSA 170 (174)
T ss_dssp H-HHHHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSEEEEEEESSSSCCHHHHHHHHHHH
T ss_pred H-HHHHHhhcCeeEeecCCCCeeeeeeEEEEECCCCeEEEEEcCCCCCCHHHHHHHHHHH
Confidence 2 22 24567899999977666555566622 2589999999876
No 208
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=98.90 E-value=2.5e-08 Score=85.84 Aligned_cols=106 Identities=11% Similarity=0.146 Sum_probs=86.6
Q ss_pred CCceecCcccHHHHHhhcCCC-CcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCC--CcHHHHHHhcCCC
Q 022560 183 QNLVTLNRTGMENLARLDHRQ-EPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG--DQKEYAKQKLQLG 259 (295)
Q Consensus 183 ~~v~~lt~~~f~~~i~~~~~~-k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~--~~~~l~~~~~~V~ 259 (295)
+.|.++|.+++..+.. .+ ..+++.|+.+||..|..+.+.|.++|+.+++ ++.|+.+|.+. . ..++ +.|++.
T Consensus 113 plv~e~t~~n~~~~~~---~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~~k~-~i~F~~vd~~~~~~-~~~l-~~fgl~ 186 (227)
T 4f9z_D 113 HMVTEYNPVTVIGLFN---SVIQIHLLLIMNKASPEYEENMHRYQKAAKLFQG-KILFILVDSGMKEN-GKVI-SFFKLK 186 (227)
T ss_dssp CSEEECCHHHHHHHHH---SSCCEEEEEEECTTSTTHHHHHHHHHHHHHHTTT-TCEEEEEETTSGGG-HHHH-HHTTCC
T ss_pred CceeecCcccHHHHhc---cCCceEEEEEEcCCcchHHHHHHHHHHHHHHhhC-CEEEEEeCCccHhH-HHHH-HHcCCC
Confidence 5688999999998875 44 3455667789999999999999999999999 79999999974 4 6778 899998
Q ss_pred --CCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 260 --SFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 260 --~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
.+|++++++.++.....+..+..+.++|.+|++.+
T Consensus 187 ~~~~P~~~i~~~~~~~ky~~~~~~~t~~~i~~Fv~~~ 223 (227)
T 4f9z_D 187 ESQLPALAIYQTLDDEWDTLPTAEVSVEHVQNFCDGF 223 (227)
T ss_dssp GGGCSEEEEEESSSCCEEEETTCCCCHHHHHHHHHHH
T ss_pred cccCCEEEEEECCCCccccCCcCCCCHHHHHHHHHHH
Confidence 89999999865533444443368999999999875
No 209
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=98.88 E-value=9e-09 Score=86.85 Aligned_cols=90 Identities=10% Similarity=-0.013 Sum_probs=62.4
Q ss_pred CCCcEEEEEECCCChh-HHHHHHHHHHHHHHhcC---CCeEEEEEEcCCC---------------------------cHH
Q 022560 202 RQEPWLVVLYAPWCQF-CQAMEGSYVELADKLAG---NGVKVGKFRADGD---------------------------QKE 250 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~-C~~~~p~~~~la~~~~~---~~v~~~~vd~~~~---------------------------~~~ 250 (295)
.++++||+||++||++ |+...|.|.++.+.+.. .++.++.|++|.. ...
T Consensus 40 ~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~~ 119 (200)
T 2b7k_A 40 LGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDPARDSPAVLKEYLSDFHPSILGLTGTFDEVKN 119 (200)
T ss_dssp TTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCTTTCCHHHHHHHHTTSCTTCEEEECCHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCCCCCCHHHHHHHHHHcCCCceEEeCCHHHHHH
Confidence 5789999999999997 99999999998887752 2688999988731 124
Q ss_pred HHHHhcCCC-CCC---------------eEEEEeCCCCCeeecCCCCCCHHHHHHHHHH
Q 022560 251 YAKQKLQLG-SFP---------------TILFFPKHSSKPIKYPSERRDVDSLMAFVDA 293 (295)
Q Consensus 251 l~~~~~~V~-~~P---------------ti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~ 293 (295)
++ +.|+|. ..| ++++++..+.+...+.| ..+.+.+.+.|.+
T Consensus 120 ~~-~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i~~~~~g-~~~~~~~~~~i~~ 176 (200)
T 2b7k_A 120 AC-KKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQFVDALGR-NYDEKTGVDKIVE 176 (200)
T ss_dssp HH-HHTTC--------------CTTTCCCEEEECTTSCEEEEECT-TCCTTHHHHHHHH
T ss_pred HH-HHcCcEEeeccccCCCCCceeeecceEEEECCCCcEEEEeCC-CCCHHHHHHHHHH
Confidence 66 788886 444 67777766654555555 4555555554443
No 210
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=98.84 E-value=2e-08 Score=86.10 Aligned_cols=90 Identities=14% Similarity=0.083 Sum_probs=68.5
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCC------c----HHHHHH------hcCCC------
Q 022560 202 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD------Q----KEYAKQ------KLQLG------ 259 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~------~----~~l~~~------~~~V~------ 259 (295)
++|+|||+|||+||++|+ ..|.|+++.++|++.++.++.|++++. . ..++ + ++++.
T Consensus 55 ~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~g~~Vlgvs~d~f~~~e~~~~~~i~~f~-~~~~~~~~~~~~fpll~d 132 (215)
T 2i3y_A 55 VGKHILFVNVATYCGLTA-QYPELNALQEELKPYGLVVLGFPCNQFGKQEPGDNKEILPGL-KYVRPGGGFVPSFQLFEK 132 (215)
T ss_dssp TTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHH-HHTSSCTTCCCSSEEBCC
T ss_pred CCCEEEEEEeCCCCCChH-hHHHHHHHHHHhccCCeEEEEEEccccCcCCCCCHHHHHHHH-HhccchhccCccceeEee
Confidence 589999999999999999 899999999999876799999987631 0 2344 4 44331
Q ss_pred -------------------------------------------CCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 260 -------------------------------------------SFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 260 -------------------------------------------~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
..|+.++++..+.++..+.| ..+.++|.+.|+++
T Consensus 133 ~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~npttfLID~~G~vv~~~~g-~~~~~~l~~~I~~l 209 (215)
T 2i3y_A 133 GDVNGEKEQKVFSFLKHSCPHPSEILGTFKSISWDPVKVHDIRWNFEKFLVGPDGIPVMRWSH-RATVSSVKTDILAY 209 (215)
T ss_dssp CCSSSTTCCHHHHHHHHHSCCSCSCCCCTTTCCSSSCCTTCCCSTTCEEEECTTSCEEEEECT-TSCHHHHHHHHHHH
T ss_pred eccCCcccchHHHHHHhhCcccccccccccccccccccccccccCceEEEECCCCeEEEEeCC-CCCHHHHHHHHHHH
Confidence 01688888776665566666 67889999888775
No 211
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=98.84 E-value=1.3e-08 Score=83.68 Aligned_cols=82 Identities=18% Similarity=0.233 Sum_probs=64.3
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcC------------------------------------
Q 022560 202 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD------------------------------------ 245 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~------------------------------------ 245 (295)
..+++|+.|+.+|||+|+.+.|.+.++.+.+.+ +.+..+++.
T Consensus 21 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~--v~~~~~~~p~~~~~s~~aa~~~~~a~~~~~~~~~~~~lf~~~~~~ 98 (175)
T 3gyk_A 21 EGDVTVVEFFDYNCPYCRRAMAEVQGLVDADPN--VRLVYREWPILGEGSDFAARAALAARQQGKYEAFHWALMGMSGKA 98 (175)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--EEEEEEECCCSCHHHHHHHHHHHHGGGGTCHHHHHHHHHTCSSCC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHhCCC--EEEEEEeCCCCCCChHHHHHHHHHHHHHhHHHHHHHHHHhcCCCC
Confidence 467899999999999999999999999988755 666666532
Q ss_pred ---------------------------------CCcHHHHHHhcCCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHH
Q 022560 246 ---------------------------------GDQKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVD 292 (295)
Q Consensus 246 ---------------------------------~~~~~l~~~~~~V~~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~ 292 (295)
.+ ..++ ++++|.++||+++ +|+ .+.| ..+.+.|.+.|+
T Consensus 99 ~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~-~~~a-~~~gv~gtPt~~i--~g~----~~~G-~~~~~~l~~~i~ 169 (175)
T 3gyk_A 99 NETGVLRIAREVGLDTEQLQRDMEAPEVTAHIAQS-MALA-QKLGFNGTPSFVV--EDA----LVPG-FVEQSQLQDAVD 169 (175)
T ss_dssp SHHHHHHHHHHTTCCHHHHHHHTTCHHHHHHHHHH-HHHH-HHHTCCSSSEEEE--TTE----EECS-CCCHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCHHHHHHHHhChHHHHHHHHH-HHHH-HHcCCccCCEEEE--CCE----EeeC-CCCHHHHHHHHH
Confidence 11 3456 7899999999987 553 3445 689999999998
Q ss_pred Hh
Q 022560 293 AL 294 (295)
Q Consensus 293 ~l 294 (295)
+.
T Consensus 170 ~~ 171 (175)
T 3gyk_A 170 RA 171 (175)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 212
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=98.83 E-value=4.5e-09 Score=86.71 Aligned_cols=87 Identities=13% Similarity=0.174 Sum_probs=64.5
Q ss_pred CCCcEEEEEECCC-ChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCC---------------------cHHHHHHhcCCC
Q 022560 202 RQEPWLVVLYAPW-CQFCQAMEGSYVELADKLAGNGVKVGKFRADGD---------------------QKEYAKQKLQLG 259 (295)
Q Consensus 202 ~~k~vvV~Fya~w-C~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~---------------------~~~l~~~~~~V~ 259 (295)
.++++||+||++| |++|+...|.|.++.++ . ++.|+.|+.+.. +..+. +.|++.
T Consensus 43 ~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~-~--~v~vv~Is~D~~~~~~~~~~~~~~~~~~~l~D~~~~~~-~~~gv~ 118 (175)
T 1xvq_A 43 RGKSVLLNIFPSVDTPVCATSVRTFDERAAA-S--GATVLCVSKDLPFAQKRFCGAEGTENVMPASAFRDSFG-EDYGVT 118 (175)
T ss_dssp TTSCEEEEECSCCCSSCCCHHHHHHHHHHHH-T--TCEEEEEESSCHHHHTTCC------CEEEEECTTSSHH-HHTTCB
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHhh-c--CCEEEEEECCCHHHHHHHHHHcCCCCceEeeCCHHHHH-HHhCCc
Confidence 4789999999999 99999999999999988 3 599999988721 14577 889998
Q ss_pred CC---------CeEEEEeCCCCCeeecCC-C---CCCHHHHHHHHH
Q 022560 260 SF---------PTILFFPKHSSKPIKYPS-E---RRDVDSLMAFVD 292 (295)
Q Consensus 260 ~~---------Pti~~~~~g~~~~~~~~g-g---~~~~e~l~~fi~ 292 (295)
.. |++++++..+++...+.| + ..+.+++++.+.
T Consensus 119 ~~~~~~~g~~~p~~~lid~~G~I~~~~~g~~~~~~~~~~~~l~~l~ 164 (175)
T 1xvq_A 119 IADGPMAGLLARAIVVIGADGNVAYTELVPEIAQEPNYEAALAALG 164 (175)
T ss_dssp BCSSTTTTSBCSEEEEECTTSBEEEEEECSBTTCCCCHHHHHHHHH
T ss_pred ccccccCCcccceEEEECCCCeEEEEEECCCcCCCCCHHHHHHHHH
Confidence 77 899999766654444432 1 224555555444
No 213
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=98.82 E-value=7.5e-09 Score=88.58 Aligned_cols=81 Identities=12% Similarity=0.298 Sum_probs=60.9
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcC------------------------------------
Q 022560 202 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD------------------------------------ 245 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~------------------------------------ 245 (295)
.++++|+.||++||++|+.+.|.+.++.+. ++.+..+...
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~----~v~v~~~~~p~~~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~ 160 (216)
T 1eej_A 85 QEKHVITVFTDITCGYCHKLHEQMADYNAL----GITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVMAGKSVAP 160 (216)
T ss_dssp TCCEEEEEEECTTCHHHHHHHTTHHHHHHT----TEEEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHHHHTTCCCCC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHhC----CcEEEEEECCccCCCchHHHHHHHHHhccCHHHHHHHHHhCCCCCh
Confidence 467899999999999999999999998652 3555544331
Q ss_pred --------CCcHHHHHHhcCCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 246 --------GDQKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 246 --------~~~~~l~~~~~~V~~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
++ ..++ ++++|.++||+ ++.+|. . +.| ..+.++|.++|+++
T Consensus 161 ~~~~~~v~~~-~~l~-~~~gV~gtPt~-v~~dG~--~--~~G-~~~~~~l~~~l~~~ 209 (216)
T 1eej_A 161 ASCDVDIADH-YALG-VQLGVSGTPAV-VLSNGT--L--VPG-YQPPKEMKEFLDEH 209 (216)
T ss_dssp CCCSCCHHHH-HHHH-HHHTCCSSSEE-ECTTSC--E--EES-CCCHHHHHHHHHHH
T ss_pred hHHHHHHHHH-HHHH-HHcCCCccCEE-EEcCCe--E--ecC-CCCHHHHHHHHHHh
Confidence 12 4677 89999999999 555664 2 345 67889999998764
No 214
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=98.82 E-value=1.3e-08 Score=84.25 Aligned_cols=92 Identities=5% Similarity=-0.027 Sum_probs=70.0
Q ss_pred CCCcEEEEEE-CCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCC--------------------cHHHHHHhcCCCC
Q 022560 202 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD--------------------QKEYAKQKLQLGS 260 (295)
Q Consensus 202 ~~k~vvV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~--------------------~~~l~~~~~~V~~ 260 (295)
.++++||+|| ++||++|....|.|.++.++|++.++.++.|..+.. +..++ +.|++..
T Consensus 50 ~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv~Vs~D~~~~~~~~~~~~~~~f~~l~D~~~~~~-~~~gv~~ 128 (179)
T 3ixr_A 50 TNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSRDSVKSHDSFCAKQGFTFPLVSDSDAILC-KAFDVIK 128 (179)
T ss_dssp TTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTCHHH-HHTTCEE
T ss_pred CCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCceEEEECCchHHH-HHcCCcc
Confidence 5778999998 999999999999999999999887799999987652 13566 7788753
Q ss_pred ------------CCeEEEEeCCCCCeeecCC--CCCCHHHHHHHHHHh
Q 022560 261 ------------FPTILFFPKHSSKPIKYPS--ERRDVDSLMAFVDAL 294 (295)
Q Consensus 261 ------------~Pti~~~~~g~~~~~~~~g--g~~~~e~l~~fi~~l 294 (295)
.|++++++..+.+...+.+ .....+++.+.|+++
T Consensus 129 ~~~~~g~~~~~~~p~~~lID~~G~I~~~~~~~~~~~~~~~il~~l~~l 176 (179)
T 3ixr_A 129 EKTMYGRQVIGIERSTFLIGPTHRIVEAWRQVKVPGHAEEVLNKLKAH 176 (179)
T ss_dssp EECCC--CEEEECCEEEEECTTSBEEEEECSCCSTTHHHHHHHHHHHH
T ss_pred cccccCcccCCcceEEEEECCCCEEEEEEcCCCCCCCHHHHHHHHHHH
Confidence 6999999866654444433 124567788777765
No 215
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=98.79 E-value=1.6e-08 Score=86.37 Aligned_cols=82 Identities=13% Similarity=0.225 Sum_probs=62.4
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcC------------------------------------
Q 022560 202 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD------------------------------------ 245 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~------------------------------------ 245 (295)
.++++|+.|+++|||+|+.+.|.+.++.+. ++.+..+...
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~~~~~----~v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~~~~~~~~~~ 160 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKEYNDL----GITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEAEKGNLPKE 160 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHHHHHT----TEEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHHHHTTCCCSS
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHhC----CcEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHHHHcCCCCCh
Confidence 467899999999999999999999987652 2555544322
Q ss_pred --------CCcHHHHHHhcCCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHhC
Q 022560 246 --------GDQKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDALR 295 (295)
Q Consensus 246 --------~~~~~l~~~~~~V~~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l~ 295 (295)
++ ..++ ++++|+++||+++ .+|+ .+.| ..+.++|.++|++.+
T Consensus 161 ~~~~~~v~~~-~~l~-~~~gV~gTPt~vi-~nG~----~~~G-~~~~~~l~~~l~~~~ 210 (211)
T 1t3b_A 161 VKTPNIVKKH-YELG-IQFGVRGTPSIVT-STGE----LIGG-YLKPADLLRALEETA 210 (211)
T ss_dssp CCCSSHHHHH-HHHH-HHHTCCSSCEEEC-TTSC----CCCS-CCCHHHHHHHHHHCC
T ss_pred HHHHHHHHHH-HHHH-HHcCCCcCCEEEE-eCCE----EecC-CCCHHHHHHHHHhcc
Confidence 12 4567 8899999999998 5665 2345 689999999998753
No 216
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=98.79 E-value=9.9e-09 Score=88.31 Aligned_cols=92 Identities=11% Similarity=0.226 Sum_probs=71.0
Q ss_pred CCCcEEEEEE-CCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCC---------------------------cHHHHH
Q 022560 202 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD---------------------------QKEYAK 253 (295)
Q Consensus 202 ~~k~vvV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~---------------------------~~~l~~ 253 (295)
+++++||+|| ++||++|+...|.|.++.++|++.++.|+.|++|.. +..++
T Consensus 55 ~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~- 133 (221)
T 2c0d_A 55 GQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVELLGISVDSVYSHLAWKNMPIEKGGIGNVEFTLVSDINKDIS- 133 (221)
T ss_dssp TTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSEEEECTTSHHH-
T ss_pred CCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhhhhcCccCCceEEEECCchHHH-
Confidence 4789999999 999999999999999999999765799999887642 02456
Q ss_pred HhcCC-----CCCCeEEEEeCCCCCeeecCCC---CCCHHHHHHHHHHh
Q 022560 254 QKLQL-----GSFPTILFFPKHSSKPIKYPSE---RRDVDSLMAFVDAL 294 (295)
Q Consensus 254 ~~~~V-----~~~Pti~~~~~g~~~~~~~~gg---~~~~e~l~~fi~~l 294 (295)
+.|++ ..+|++++++..+.+...+.|. ..+.++|.+.|+++
T Consensus 134 ~~ygv~~~~g~~~P~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~L 182 (221)
T 2c0d_A 134 KNYNVLYDNSFALRGLFIIDKNGCVRHQTVNDLPIGRNVQEVLRTIDSI 182 (221)
T ss_dssp HHTTCEETTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred HHcCCcccCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 67777 3689999998766544443331 35788999988875
No 217
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=98.77 E-value=1.3e-08 Score=89.24 Aligned_cols=93 Identities=18% Similarity=0.170 Sum_probs=72.0
Q ss_pred CCC-cEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCC--------------------------cHHHHHH
Q 022560 202 RQE-PWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD--------------------------QKEYAKQ 254 (295)
Q Consensus 202 ~~k-~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~--------------------------~~~l~~~ 254 (295)
.++ .||++|+++||++|....+.|.+++++|++.++.++.|++|.. +..++ +
T Consensus 32 ~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~gv~VI~VS~Ds~~~~~~w~~~~~~~~~~~i~fPil~D~~~~ia-~ 110 (249)
T 3a2v_A 32 QGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQGTVA-R 110 (249)
T ss_dssp TTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHHHHHHTCCCCCSCEEECTTSHHH-H
T ss_pred CCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHhCCcEEEEEECCCHHHHHHHHHHHHHhcCCCCceeEEECCchHHH-H
Confidence 356 4566889999999999999999999999876799999998652 14577 8
Q ss_pred hcCCC-------CCCeEEEEeCCCCCeeecCCC---CCCHHHHHHHHHHhC
Q 022560 255 KLQLG-------SFPTILFFPKHSSKPIKYPSE---RRDVDSLMAFVDALR 295 (295)
Q Consensus 255 ~~~V~-------~~Pti~~~~~g~~~~~~~~gg---~~~~e~l~~fi~~l~ 295 (295)
.|+|. .+|++++++..+.+...+.+. .++.++|...|++++
T Consensus 111 ~ygv~~~~~g~~~~p~~fIID~dG~I~~~~~~~~~~gr~~~Ellr~I~alq 161 (249)
T 3a2v_A 111 RLGLLHAESATHTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKALK 161 (249)
T ss_dssp HHTCCCTTCSSSCCEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HhCCccccCCCcccceEEEECCCCeEEEEEecCCcccchhHHHHHHHHHHH
Confidence 89987 899999998666533333221 258999999998764
No 218
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=98.75 E-value=4.7e-08 Score=83.21 Aligned_cols=90 Identities=11% Similarity=0.014 Sum_probs=67.4
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCC------c----HHHHHH------hcCCC------
Q 022560 202 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD------Q----KEYAKQ------KLQLG------ 259 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~------~----~~l~~~------~~~V~------ 259 (295)
++|+|||+|||+||++| ...|.|.++.++|++.++.++.|++++. . ..++ + ++++.
T Consensus 37 kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~g~~vlgvs~d~f~~~e~~~~~~i~~f~-~~~~~~~~~~~~fp~l~d 114 (207)
T 2r37_A 37 AGKYVLFVNVASYGGLT-GQYIELNALQEELAPFGLVILGFPCNQFGKQEPGENSEILPTL-KYVRPGGGFVPNFQLFEK 114 (207)
T ss_dssp TTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGGTEEEEEEECCCBTTCCCSCHHHHHHHH-HHTSSCTTCCCSSEEBCC
T ss_pred CCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccCCEEEEEEECcccCcCCCCCHHHHHHHH-HhcchhhccCccceeeeE
Confidence 58999999999999999 6889999999999876799999987521 0 2344 4 44331
Q ss_pred -------------------------------------------CCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 260 -------------------------------------------SFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 260 -------------------------------------------~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
..|+.++++..+.++..+.| ..+.++|.+.|+++
T Consensus 115 ~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~~~ttflID~~G~i~~~~~g-~~~~~~l~~~I~~l 191 (207)
T 2r37_A 115 GDVNGEKEQKFYTFLKNSCPPTSELLGTSDRLFWEPMKVHDIRWNFEKFLVGPDGIPIMRWHH-RTTVSNVKMDILSY 191 (207)
T ss_dssp CCSSSTTCCHHHHHHHHHSCCSCSCCCCGGGBCCSSCCTTCCCSTTCEEEECTTSCEEEEECT-TSCHHHHHHHHHHH
T ss_pred eccCCcccchHHHHHHhhCccccccccccccccccccccCcccccceEEEECCCCcEEEEECC-CCCHHHHHHHHHHH
Confidence 01688888776665566666 67888888888764
No 219
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=98.74 E-value=2.3e-08 Score=83.39 Aligned_cols=92 Identities=12% Similarity=0.095 Sum_probs=69.8
Q ss_pred CCCcEEEEEEC-CCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCC------------------------cHHHHHHhc
Q 022560 202 RQEPWLVVLYA-PWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD------------------------QKEYAKQKL 256 (295)
Q Consensus 202 ~~k~vvV~Fya-~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~------------------------~~~l~~~~~ 256 (295)
+++++||+||+ +||++|+...|.|.++.++|++.++.++.|+.+.. +..++ +.|
T Consensus 29 ~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~fp~l~D~~~~~~-~~y 107 (186)
T 1n8j_A 29 EGRWSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGALT-RNF 107 (186)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSEEEECTTSHHH-HHT
T ss_pred CCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCcccCCceeEEECCchHHH-HHh
Confidence 47899999995 99999999999999999999766799999987642 12455 566
Q ss_pred CCC------CCCeEEEEeCCCCCeeecCCC---CCCHHHHHHHHHHh
Q 022560 257 QLG------SFPTILFFPKHSSKPIKYPSE---RRDVDSLMAFVDAL 294 (295)
Q Consensus 257 ~V~------~~Pti~~~~~g~~~~~~~~gg---~~~~e~l~~fi~~l 294 (295)
++. .+|++++++..+.+...+.+. ..+.++|.+.|+++
T Consensus 108 gv~~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~~l~~~l~~l 154 (186)
T 1n8j_A 108 DNMREDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAA 154 (186)
T ss_dssp TCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred CCccCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 765 379999998666544444431 23688999988875
No 220
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=98.74 E-value=6.1e-09 Score=84.54 Aligned_cols=92 Identities=15% Similarity=0.253 Sum_probs=63.9
Q ss_pred CCCcEEEEEE-CCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCC--------------------cHHHHHHhcCCC-
Q 022560 202 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD--------------------QKEYAKQKLQLG- 259 (295)
Q Consensus 202 ~~k~vvV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~--------------------~~~l~~~~~~V~- 259 (295)
++|++||.|| ++||++|+...|.+.++.+++++.++.++.|+.+.. +.+++ +.|+|.
T Consensus 29 ~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~~~~v~vs~d~~~~~~~~~~~~~~~~p~l~D~~~~v~-~~ygv~~ 107 (157)
T 4g2e_A 29 KGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLGISVDPPFSNKAFKEHNKLNFTILSDYNREVV-KKYNVAW 107 (157)
T ss_dssp TTSCEEEEECSCTTCCC------CCSCGGGGGGGCSSEEEEEESSCHHHHHHHHHHTTCCSEEEECTTSHHH-HHTTCEE
T ss_pred CCCeEEEEecCCCCCCccccchhhcccccccccccCceEeeecccchhHHHHHHHHcCCcEEEEEcCCcHHH-HHcCCcc
Confidence 5789999999 999999999999999999888877899999987653 13556 677763
Q ss_pred ----------CCCeEEEEeCCCCCeeecC----CCCCCHHHHHHHHHHh
Q 022560 260 ----------SFPTILFFPKHSSKPIKYP----SERRDVDSLMAFVDAL 294 (295)
Q Consensus 260 ----------~~Pti~~~~~g~~~~~~~~----gg~~~~e~l~~fi~~l 294 (295)
..|++++++..+.+...+. .+..+.+++.+.|++|
T Consensus 108 ~~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~~L 156 (157)
T 4g2e_A 108 EFPALPGYVLAKRAVFVIDKEGKVRYKWVSDDPTKEPPYDEIEKVVKSL 156 (157)
T ss_dssp ECTTSTTCEEECEEEEEECTTSBEEEEEEESSTTCCCCHHHHHHHHHHT
T ss_pred ccccCCCcceeeeeEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHh
Confidence 4678888876654332221 2246789999999887
No 221
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=98.74 E-value=2.6e-08 Score=84.91 Aligned_cols=92 Identities=11% Similarity=0.187 Sum_probs=71.2
Q ss_pred CCCcEEEEEE-CCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCC---------------------------cHHHHH
Q 022560 202 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD---------------------------QKEYAK 253 (295)
Q Consensus 202 ~~k~vvV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~---------------------------~~~l~~ 253 (295)
.++++||+|| ++||++|....|.|.++.++|++.++.++.|+++.. +..++
T Consensus 47 ~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~- 125 (211)
T 2pn8_A 47 RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQIS- 125 (211)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHHH-
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhccCccCCceEEEECCchHHH-
Confidence 4789999999 999999999999999999999776799999887542 12456
Q ss_pred HhcCCC------CCCeEEEEeCCCCCeeecCCC---CCCHHHHHHHHHHh
Q 022560 254 QKLQLG------SFPTILFFPKHSSKPIKYPSE---RRDVDSLMAFVDAL 294 (295)
Q Consensus 254 ~~~~V~------~~Pti~~~~~g~~~~~~~~gg---~~~~e~l~~fi~~l 294 (295)
+.|++. .+|++++++..+.+...+.|. ..+.+++.+.|+++
T Consensus 126 ~~ygv~~~~~g~~~p~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~l 175 (211)
T 2pn8_A 126 KDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAF 175 (211)
T ss_dssp HHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HHcCCcccCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHh
Confidence 677874 699999998766544443331 25788999888875
No 222
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=98.73 E-value=1.2e-07 Score=74.05 Aligned_cols=98 Identities=16% Similarity=0.154 Sum_probs=79.8
Q ss_pred CCceec-CcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCC
Q 022560 183 QNLVTL-NRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSF 261 (295)
Q Consensus 183 ~~v~~l-t~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~ 261 (295)
..+..| +.+++++++. .++++||-|+++||++| .+.|.++|+.+ + .+.|+.++ + .+++ +++++. .
T Consensus 21 ~~~~~i~s~~e~e~fi~---~~~v~VVGfF~~~~~~~---~~~F~~~A~~~-~-d~~F~~t~---~-~~v~-~~~~v~-~ 86 (124)
T 2l4c_A 21 QEPTWLTDVPAAMEFIA---ATEVAVIGFFQDLEIPA---VPILHSMVQKF-P-GVSFGIST---D-SEVL-THYNIT-G 86 (124)
T ss_dssp CCCEECCSHHHHHHHHH---TSSEEEEEECSCTTSTH---HHHHHHHHHHC-T-TSEEEEEC---C-HHHH-HHTTCC-S
T ss_pred CcceEcCCHHHHHHHHh---cCCCEEEEEECCCCChh---HHHHHHHHHhC-C-CceEEEEC---h-HHHH-HHcCCC-C
Confidence 334556 4477888886 78899999999999998 67899999999 4 59998775 3 6788 899998 8
Q ss_pred CeEEEEeCCCCCeeecCC---CCCCHHHHHHHHHHh
Q 022560 262 PTILFFPKHSSKPIKYPS---ERRDVDSLMAFVDAL 294 (295)
Q Consensus 262 Pti~~~~~g~~~~~~~~g---g~~~~e~l~~fi~~l 294 (295)
|++++|++.......|.| +..+.++|.+||...
T Consensus 87 ~~vvlfkkfde~~~~~~g~~~~~~~~~~L~~FI~~n 122 (124)
T 2l4c_A 87 NTICLFRLVDNEQLNLEDEDIESIDATKLSRFIEIN 122 (124)
T ss_dssp SCEEEEETTTTEEEEECHHHHTTCCHHHHHHHHHHH
T ss_pred CeEEEEEcCCCCceeecCcccCCCCHHHHHHHHHHh
Confidence 999999987665777875 368999999999863
No 223
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=98.70 E-value=7.4e-08 Score=77.77 Aligned_cols=74 Identities=14% Similarity=0.118 Sum_probs=55.3
Q ss_pred CCcEEEEEE-CCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCC--------------------cHHHHHHhcCCCCC
Q 022560 203 QEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD--------------------QKEYAKQKLQLGSF 261 (295)
Q Consensus 203 ~k~vvV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~--------------------~~~l~~~~~~V~~~ 261 (295)
++++||+|| ++||++|....|.|.++.+++++.+ .++.|+++.. +..+. +.|++...
T Consensus 35 ~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~-~vv~is~d~~~~~~~~~~~~~~~~~~l~D~~~~~~-~~~gv~~~ 112 (159)
T 2a4v_A 35 NRVVVFFVYPRASTPGSTRQASGFRDNYQELKEYA-AVFGLSADSVTSQKKFQSKQNLPYHLLSDPKREFI-GLLGAKKT 112 (159)
T ss_dssp CSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTC-EEEEEESCCHHHHHHHHHHHTCSSEEEECTTCHHH-HHHTCBSS
T ss_pred CCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCC-cEEEEeCCCHHHHHHHHHHhCCCceEEECCccHHH-HHhCCccc
Confidence 347889987 9999999999999999999998756 8888877532 14677 78999999
Q ss_pred C------eEEEEeCCCCCeeecCC
Q 022560 262 P------TILFFPKHSSKPIKYPS 279 (295)
Q Consensus 262 P------ti~~~~~g~~~~~~~~g 279 (295)
| +.+++++|+ +...+.|
T Consensus 113 p~~g~~~~~~li~~G~-i~~~~~g 135 (159)
T 2a4v_A 113 PLSGSIRSHFIFVDGK-LKFKRVK 135 (159)
T ss_dssp SSSCBCCEEEEEETTE-EEEEEES
T ss_pred ccCCccceEEEEcCCE-EEEEEcc
Confidence 8 444446665 2344444
No 224
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=98.69 E-value=7.2e-08 Score=79.10 Aligned_cols=92 Identities=11% Similarity=0.106 Sum_probs=69.5
Q ss_pred CCCcEEEEEECCCCh-hHHHHHHHHHHHHHHhcC--CCeEEEEEEcCC-C-----------------------------c
Q 022560 202 RQEPWLVVLYAPWCQ-FCQAMEGSYVELADKLAG--NGVKVGKFRADG-D-----------------------------Q 248 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~-~C~~~~p~~~~la~~~~~--~~v~~~~vd~~~-~-----------------------------~ 248 (295)
.+|++||+||++||+ .|....+.+.++.+.+.. .++.++.|.++. . .
T Consensus 27 ~Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~d~~~~~~~~~~~~~~~~~~w~~l~~~~~~~~ 106 (170)
T 3me7_A 27 KGKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKDTLEDIKRFQKEYGIDGKGWKVVKAKTSEDL 106 (170)
T ss_dssp TTSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTTCCHHHHHHHHHHTTCCSSSEEEEEESSHHHH
T ss_pred CCCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCCCCHHHHHHHHHHcCCCCCCeEEEeCCCHHHH
Confidence 478999999999997 699999999999999964 468888887751 0 0
Q ss_pred HHHHHHhcC---------CCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 249 KEYAKQKLQ---------LGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 249 ~~l~~~~~~---------V~~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
..++ +.|+ +...|++++++..+++...+.|...+.++|.+.|+++
T Consensus 107 ~~~~-~~~g~~~~~~~~~~~~~~~~~lID~~G~i~~~~~g~~~~~~~i~~~l~~~ 160 (170)
T 3me7_A 107 FKLL-DAIDFRFMTAGNDFIHPNVVVVLSPELQIKDYIYGVNYNYLEFVNALRLA 160 (170)
T ss_dssp HHHH-HHTTCCCEEETTEEECCCEEEEECTTSBEEEEEESSSCCHHHHHHHHHHH
T ss_pred HHHH-HHCCeEEecCCCccccCceEEEECCCCeEEEEEeCCCCCHHHHHHHHHHh
Confidence 2344 5544 3456889999876664545566457899999999875
No 225
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=98.67 E-value=9.1e-08 Score=80.06 Aligned_cols=43 Identities=16% Similarity=0.213 Sum_probs=39.4
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcC
Q 022560 202 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD 245 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~ 245 (295)
.++++||.|+++||++|+.+.|.+.++.+.+.+ ++.|..++++
T Consensus 24 ~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~~~~ 66 (195)
T 3hd5_A 24 PGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQ-DVVLKQVPIA 66 (195)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCT-TEEEEEEECC
T ss_pred CCCeEEEEEECCCCccHHHhhHHHHHHHHHCCC-CeEEEEEecc
Confidence 578899999999999999999999999999987 7999998875
No 226
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=98.66 E-value=2.3e-08 Score=71.47 Aligned_cols=71 Identities=15% Similarity=0.194 Sum_probs=52.9
Q ss_pred EEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHH--HhcCCCCCCeEEEEeCCCCCeeecCCCCCCH
Q 022560 207 LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAK--QKLQLGSFPTILFFPKHSSKPIKYPSERRDV 284 (295)
Q Consensus 207 vV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~--~~~~V~~~Pti~~~~~g~~~~~~~~gg~~~~ 284 (295)
++.|+++||++|+.+.+.++++ ++.|..+|++++ +++.. .++++.++|+++ .+|+ .+ + ..+.
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~~-------~i~~~~vdi~~~-~~~~~~~~~~g~~~vP~~~--~~g~--~~---~-g~~~ 66 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMENR-------GFDFEMINVDRV-PEAAEALRAQGFRQLPVVI--AGDL--SW---S-GFRP 66 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-------TCCCEEEETTTC-HHHHHHHHHTTCCSSCEEE--ETTE--EE---E-SCCH
T ss_pred EEEEcCCCChhHHHHHHHHHHC-------CCCeEEEECCCC-HHHHHHHHHhCCCccCEEE--ECCE--EE---e-cCCH
Confidence 6789999999999999988763 478888999887 55441 258999999983 4554 22 2 2577
Q ss_pred HHHHHHHHH
Q 022560 285 DSLMAFVDA 293 (295)
Q Consensus 285 e~l~~fi~~ 293 (295)
++|.++|++
T Consensus 67 ~~l~~~l~~ 75 (81)
T 1h75_A 67 DMINRLHPA 75 (81)
T ss_dssp HHHGGGSCC
T ss_pred HHHHHHHhc
Confidence 888877754
No 227
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=98.65 E-value=7.7e-08 Score=83.73 Aligned_cols=93 Identities=11% Similarity=0.189 Sum_probs=72.4
Q ss_pred CCCcEEEEEEC-CCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCC---------------------------cHHHHH
Q 022560 202 RQEPWLVVLYA-PWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD---------------------------QKEYAK 253 (295)
Q Consensus 202 ~~k~vvV~Fya-~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~---------------------------~~~l~~ 253 (295)
.++++||+||+ +||++|....|.|.+++++|++.++.++.|++|.. +..++
T Consensus 76 ~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~gv~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~fp~l~D~~~~v~- 154 (240)
T 3qpm_A 76 RGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVACSVDSQFTHLAWIITPRKQGGLGPMKIPLLSDLTHQIS- 154 (240)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTSHHH-
T ss_pred CCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhcCCCCCceeEEeCchHHHH-
Confidence 57899999999 99999999999999999999876799999987642 13566
Q ss_pred HhcCCC------CCCeEEEEeCCCCCeeecCC---CCCCHHHHHHHHHHhC
Q 022560 254 QKLQLG------SFPTILFFPKHSSKPIKYPS---ERRDVDSLMAFVDALR 295 (295)
Q Consensus 254 ~~~~V~------~~Pti~~~~~g~~~~~~~~g---g~~~~e~l~~fi~~l~ 295 (295)
+.|++. .+|++++++..+.+...+.+ ...+.+++.+.|+.++
T Consensus 155 ~~ygv~~~~~g~~~p~~flID~~G~I~~~~~~~~~~~~~~~eil~~l~~lq 205 (240)
T 3qpm_A 155 KDYGVYLEDQGHTLRGLFIIDEKGVLRQITMNDLPVGRSVDETLRLVQAFQ 205 (240)
T ss_dssp HHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HHhCCccccCCCccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHhh
Confidence 778887 68999999866653333222 1356889998888763
No 228
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=98.63 E-value=1.1e-07 Score=66.56 Aligned_cols=69 Identities=13% Similarity=0.199 Sum_probs=53.6
Q ss_pred EEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHH---hcCCCCCCeEEEEeCCCCCeeecCCCCCC
Q 022560 207 LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQ---KLQLGSFPTILFFPKHSSKPIKYPSERRD 283 (295)
Q Consensus 207 vV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~---~~~V~~~Pti~~~~~g~~~~~~~~gg~~~ 283 (295)
++.|+++||++|+.+.+.++++ ++.|..+|++.+ .++. + ++++.++|++++ +|+ . ..| .+
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~-------~i~~~~~di~~~-~~~~-~~~~~~~~~~vP~l~~--~g~--~--~~g--~~ 65 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRA-------GLAYNTVDISLD-DEAR-DYVMALGYVQAPVVEV--DGE--H--WSG--FR 65 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-------TCCCEEEETTTC-HHHH-HHHHHTTCBCCCEEEE--TTE--E--EES--CC
T ss_pred EEEEeCCCChHHHHHHHHHHHc-------CCCcEEEECCCC-HHHH-HHHHHcCCCccCEEEE--CCe--E--EcC--CC
Confidence 6789999999999999988764 378888999887 5555 4 799999999974 554 2 223 67
Q ss_pred HHHHHHHHH
Q 022560 284 VDSLMAFVD 292 (295)
Q Consensus 284 ~e~l~~fi~ 292 (295)
.++|.++|+
T Consensus 66 ~~~l~~~l~ 74 (75)
T 1r7h_A 66 PERIKQLQA 74 (75)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHHh
Confidence 888888874
No 229
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=98.60 E-value=1.2e-07 Score=79.15 Aligned_cols=42 Identities=26% Similarity=0.343 Sum_probs=37.5
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEc
Q 022560 202 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRA 244 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~ 244 (295)
.++++|+.|+++||++|+.+.|.+.++.+.+.+ ++.|..+.+
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~ 65 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPA-DVHFVRLPA 65 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCT-TEEEEEEEC
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCC-CeEEEEEeh
Confidence 468899999999999999999999999999887 788876665
No 230
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=98.60 E-value=1.3e-08 Score=83.38 Aligned_cols=99 Identities=11% Similarity=0.259 Sum_probs=72.4
Q ss_pred cHHHHHhhcCCCCcEEEEEE-CCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCC--------------------cHH
Q 022560 192 GMENLARLDHRQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD--------------------QKE 250 (295)
Q Consensus 192 ~f~~~i~~~~~~k~vvV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~--------------------~~~ 250 (295)
++.++.. ++|++||.|| ++||++|....|.|.++.++|++.++.++.|+.+.. +.+
T Consensus 25 ~Lsd~~~---~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~fp~l~D~~~~ 101 (164)
T 4gqc_A 25 NLYEVLK---RGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKANAEVLAISVDSPWCLKKFKDENRLAFNLLSDYNRE 101 (164)
T ss_dssp EHHHHHH---TSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGSSSEEEEEESSCHHHHHHHHHHTTCCSEEEECTTSH
T ss_pred EHHHHhc---CCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhccCceEEEecCCCHHHHHHHHHhcCcccceeecCchH
Confidence 3445443 6889999998 999999999999999999888877799999987642 135
Q ss_pred HHHHhcCCC----------CCCeEEEEeCCCCCeeecCC----CCCCHHHHHHHHHHh
Q 022560 251 YAKQKLQLG----------SFPTILFFPKHSSKPIKYPS----ERRDVDSLMAFVDAL 294 (295)
Q Consensus 251 l~~~~~~V~----------~~Pti~~~~~g~~~~~~~~g----g~~~~e~l~~fi~~l 294 (295)
++ +.|+|. ..|++++++..+.+...+.+ +..+.+++.+.|+++
T Consensus 102 v~-~~ygv~~~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~~l 158 (164)
T 4gqc_A 102 VI-KLYNVYHEDLKGLKMVAKRAVFIVKPDGTVAYKWVTDNPLNEPDYDEVVREANKI 158 (164)
T ss_dssp HH-HHTTCEEEEETTEEEEECCEEEEECTTSBEEEEEECSCTTCCCCHHHHHHHHHHH
T ss_pred HH-HHcCCcccccccCcCCeeeEEEEECCCCEEEEEEEeCCCCCCCCHHHHHHHHHHH
Confidence 66 777773 47888999766643332221 235788888888765
No 231
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=98.57 E-value=2.8e-07 Score=74.78 Aligned_cols=90 Identities=10% Similarity=0.077 Sum_probs=66.8
Q ss_pred CCCcEEEEEEC-CCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCC----------------------cHHHHHHhcCC
Q 022560 202 RQEPWLVVLYA-PWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD----------------------QKEYAKQKLQL 258 (295)
Q Consensus 202 ~~k~vvV~Fya-~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~----------------------~~~l~~~~~~V 258 (295)
+++++||+||+ +||++|....|.+.++.+++ . ++.++.|+.+.. +..+. +.|++
T Consensus 41 ~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~-~-~v~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~-~~~gv 117 (163)
T 1psq_A 41 DGKKKVLSVVPSIDTGICSTQTRRFNEELAGL-D-NTVVLTVSMDLPFAQKRWCGAEGLDNAIMLSDYFDHSFG-RDYAL 117 (163)
T ss_dssp TTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-T-TEEEEEEESSCHHHHHHHHHHHTCTTSEEEECTTTCHHH-HHHTC
T ss_pred CCCEEEEEEECCCCCCccHHHHHHHHHHHHHc-C-CcEEEEEECCCHHHHHHHHHhcCCCCcEEecCCchhHHH-HHhCC
Confidence 57899999995 99999999999999998888 3 688888876532 13455 66777
Q ss_pred C----C--CCeEEEEeCCCCCeeecCC----CCCCHHHHHHHHHHh
Q 022560 259 G----S--FPTILFFPKHSSKPIKYPS----ERRDVDSLMAFVDAL 294 (295)
Q Consensus 259 ~----~--~Pti~~~~~g~~~~~~~~g----g~~~~e~l~~fi~~l 294 (295)
. + .|++++++..+.+...+.| ...+.+++.+.|+++
T Consensus 118 ~~~~~g~~~p~~~liD~~G~i~~~~~g~~~~~~~~~~~~l~~l~~l 163 (163)
T 1psq_A 118 LINEWHLLARAVFVLDTDNTIRYVEYVDNINSEPNFEAAIAAAKAL 163 (163)
T ss_dssp BCTTTCSBCCEEEEECTTCBEEEEEECSBTTSCCCHHHHHHHHHHC
T ss_pred ccccCCceEEEEEEEcCCCeEEEEEecCCcCCCCCHHHHHHHHHhC
Confidence 5 3 3999999876654554433 134568888888764
No 232
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=98.56 E-value=1.8e-07 Score=81.32 Aligned_cols=87 Identities=16% Similarity=0.282 Sum_probs=63.9
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCC-----------------------------------
Q 022560 202 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG----------------------------------- 246 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~----------------------------------- 246 (295)
..+.+|+.|+.+|||+|+.+.+.+.++.+. + +|.|..+.+.-
T Consensus 96 ~ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~--g-~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~l~ 172 (241)
T 1v58_A 96 DAPVIVYVFADPFCPYCKQFWQQARPWVDS--G-KVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEASGGKLKLN 172 (241)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHT--T-SEEEEEEECCCSSTTHHHHHHHHHHSSSHHHHHHHHHHTTTCCCCC
T ss_pred CCCeEEEEEECCCChhHHHHHHHHHHHHhC--C-cEEEEEEECCcCCCcHHHHHHHHHHccCHHHHHHHHHHHhccCCCC
Confidence 356789999999999999999999887664 3 57777655420
Q ss_pred --------------CcHHHHHHhcCCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 247 --------------DQKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 247 --------------~~~~l~~~~~~V~~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
.+..++ ++++|.++||+++.+.++. .....| ..+.++|.++|++.
T Consensus 173 ~~~~~~~~~~~~v~~~~~l~-~~~gv~gtPt~vi~~~~G~-~~~~~G-~~~~~~L~~~l~~~ 231 (241)
T 1v58_A 173 VPANVSTEQMKVLSDNEKLM-DDLGANVTPAIYYMSKENT-LQQAVG-LPDQKTLNIIMGNK 231 (241)
T ss_dssp CCSSCCHHHHHHHHHHHHHH-HHHTCCSSCEEEEEETTTE-EEEEES-SCCHHHHHHHTTC-
T ss_pred ccccCCHHHHHHHHHHHHHH-HHcCCCCCCEEEEECCCCC-EEEecC-CCCHHHHHHHHHHH
Confidence 013456 7899999999999874332 334555 68999999988754
No 233
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=98.53 E-value=2.1e-07 Score=80.63 Aligned_cols=90 Identities=13% Similarity=0.246 Sum_probs=65.8
Q ss_pred CCCcEEEEEE-CCCChhHH-HHHHHHHHHHHHhcCCCe-EEEEEEcCCC---------------------cHHHHHHhcC
Q 022560 202 RQEPWLVVLY-APWCQFCQ-AMEGSYVELADKLAGNGV-KVGKFRADGD---------------------QKEYAKQKLQ 257 (295)
Q Consensus 202 ~~k~vvV~Fy-a~wC~~C~-~~~p~~~~la~~~~~~~v-~~~~vd~~~~---------------------~~~l~~~~~~ 257 (295)
+++++||+|| ++||++|+ ...|.|.+++++|++.++ .++.|+.+.. +..++ +.|+
T Consensus 32 ~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~-~~~g 110 (241)
T 1nm3_A 32 DNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYGVDDILVVSVNDTFVMNAWKEDEKSENISFIPDGNGEFT-EGMG 110 (241)
T ss_dssp TTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSCHHHHHHHHHHTTCTTSEEEECTTSHHH-HHTT
T ss_pred CCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEcCCHHHHHHHHHhcCCCceEEEECCCcHHH-HHhC
Confidence 4789999999 99999999 999999999999976679 8999987642 13566 6788
Q ss_pred CC-----------CCCeEEEEeCCCCCeeecCCC--C------CCHHHHHHHHHH
Q 022560 258 LG-----------SFPTILFFPKHSSKPIKYPSE--R------RDVDSLMAFVDA 293 (295)
Q Consensus 258 V~-----------~~Pti~~~~~g~~~~~~~~gg--~------~~~e~l~~fi~~ 293 (295)
+. ..|+.+++++|. +...+.+. . .+.+++.+.|..
T Consensus 111 v~~~~~~~g~~~~~~p~t~li~~G~-i~~~~~~~~~~~~~~~~~~~~~il~~l~~ 164 (241)
T 1nm3_A 111 MLVGKEDLGFGKRSWRYSMLVKNGV-VEKMFIEPNEPGDPFKVSDADTMLKYLAP 164 (241)
T ss_dssp CEEECTTTTCCEEECCEEEEEETTE-EEEEEECCSCSSCCCSSSSHHHHHHHHCT
T ss_pred ceeecccccCcccceeEEEEEECCE-EEEEEEeccCCCccceecCHHHHHHHhhh
Confidence 75 358877775554 23333331 1 467888777754
No 234
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=98.51 E-value=2.5e-07 Score=79.48 Aligned_cols=98 Identities=16% Similarity=0.190 Sum_probs=79.8
Q ss_pred CCceec-CcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCC
Q 022560 183 QNLVTL-NRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSF 261 (295)
Q Consensus 183 ~~v~~l-t~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~ 261 (295)
..+++| +.+++++++. +++.+||-|+++| |..+.+.|.++|+.+. .+.|+... + .+++ ++|+|++
T Consensus 9 ~~~~~l~s~~~~~~~l~---~~~v~vVgff~~~---~~~~~~~f~~~A~~l~--~~~F~~t~---~-~~v~-~~~~v~~- 74 (227)
T 4f9z_D 9 QEPTWLTDVPAAMEFIA---ATEVAVIGFFQDL---EIPAVPILHSMVQKFP--GVSFGIST---D-SEVL-THYNITG- 74 (227)
T ss_dssp CCCEECCSHHHHHHHHH---TSSEEEEEECSCS---CSTHHHHHHHHTTTCT--TSEEEEEC---C-HHHH-HHTTCCS-
T ss_pred CCCeeeCCHHHHHHHHh---cCCeEEEEEecCC---CchhHHHHHHHHHhCC--CceEEEEC---C-HHHH-HHcCCCC-
Confidence 456667 5589999876 7889999999999 5678999999999994 58988753 4 7889 8999998
Q ss_pred CeEEEEeCCCCCeeecCC---CCCCHHHHHHHHHHh
Q 022560 262 PTILFFPKHSSKPIKYPS---ERRDVDSLMAFVDAL 294 (295)
Q Consensus 262 Pti~~~~~g~~~~~~~~g---g~~~~e~l~~fi~~l 294 (295)
|++++|++.......|.| |.++.++|.+||.+.
T Consensus 75 p~i~lfk~~~~~~~~~~~~~~g~~~~~~l~~fi~~~ 110 (227)
T 4f9z_D 75 NTICLFRLVDNEQLNLEDEDIESIDATKLSRFIEIN 110 (227)
T ss_dssp SEEEEEETTTTEEEEECHHHHHTCCHHHHHHHHHHH
T ss_pred CeEEEEEecCcccccccccccCCCCHHHHHHHHHHh
Confidence 999999986554677874 368999999999763
No 235
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=98.50 E-value=1.6e-07 Score=82.38 Aligned_cols=93 Identities=11% Similarity=0.174 Sum_probs=71.4
Q ss_pred CCCcEEEEEE-CCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCC---------------------------cHHHHH
Q 022560 202 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD---------------------------QKEYAK 253 (295)
Q Consensus 202 ~~k~vvV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~---------------------------~~~l~~ 253 (295)
.++.+||+|| ++||++|....|.|.+++++|++.++.++.|++|.. +..++
T Consensus 90 kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~gv~vv~IS~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~va- 168 (254)
T 3tjj_A 90 RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQIS- 168 (254)
T ss_dssp TTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTSCCSCSSCEEECTTSHHH-
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHHHHhcCCcccccceeeCcHHHHH-
Confidence 4789999999 999999999999999999999876799999987642 13466
Q ss_pred HhcCCC------CCCeEEEEeCCCCCeeecCC---CCCCHHHHHHHHHHhC
Q 022560 254 QKLQLG------SFPTILFFPKHSSKPIKYPS---ERRDVDSLMAFVDALR 295 (295)
Q Consensus 254 ~~~~V~------~~Pti~~~~~g~~~~~~~~g---g~~~~e~l~~fi~~l~ 295 (295)
+.|++. .+|++++++..+.+...+.+ ...+.+++.+.|+.++
T Consensus 169 ~~ygv~~~~~g~~~p~tflID~~G~I~~~~~~~~~~~~~~~eil~~L~alq 219 (254)
T 3tjj_A 169 KDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQ 219 (254)
T ss_dssp HHHTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred HHcCCccccCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHhhc
Confidence 677774 57999999866653333222 1367889998888763
No 236
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=98.46 E-value=1.4e-06 Score=74.92 Aligned_cols=90 Identities=19% Similarity=0.224 Sum_probs=67.9
Q ss_pred cEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCC------------------------------cHHHHHH
Q 022560 205 PWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD------------------------------QKEYAKQ 254 (295)
Q Consensus 205 ~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~------------------------------~~~l~~~ 254 (295)
.||+.|+++||++|....+.|.+++++|++.++.++.|++|.. +..++ +
T Consensus 34 vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~IS~D~~~~~~~~~~~i~~~~~~~~~~~~~fpil~D~~~~va-~ 112 (224)
T 1prx_A 34 GILFSHPRDFTPVCTTELGRAAKLAPEFAKRNVKLIALSIDSVEDHLAWSKDINAYNSEEPTEKLPFPIIDDRNRELA-I 112 (224)
T ss_dssp EEEEEESCSSCHHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSCCCSCCSSCEEECTTCHHH-H
T ss_pred EEEEEECCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhhCcccccCcCcceeecCchHHH-H
Confidence 5666678999999999999999999999876799999887642 12455 6
Q ss_pred hcCCC------------CCCeEEEEeCCCCCeeecCC---CCCCHHHHHHHHHHhC
Q 022560 255 KLQLG------------SFPTILFFPKHSSKPIKYPS---ERRDVDSLMAFVDALR 295 (295)
Q Consensus 255 ~~~V~------------~~Pti~~~~~g~~~~~~~~g---g~~~~e~l~~fi~~l~ 295 (295)
.|++. .+|++++++..+.+...+.+ ..++.++|.+.|++++
T Consensus 113 ~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~~~gr~~~eil~~i~~l~ 168 (224)
T 1prx_A 113 LLGMLDPAEKDEKGMPVTARVVFVFGPDKKLKLSILYPATTGRNFDEILRVVISLQ 168 (224)
T ss_dssp HTTSSCSCTTCSSSCCTTCCEEEEECTTSBEEEEEECCTTBCCCHHHHHHHHHHHH
T ss_pred HhCCCCcccccCCCccccceEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 77773 37999999876654443322 1368999999998764
No 237
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=98.45 E-value=3e-07 Score=74.67 Aligned_cols=69 Identities=14% Similarity=0.210 Sum_probs=54.3
Q ss_pred CCCcEEEEEE-CCCChhHH-HHHHHHHHHHHHhcCCCeE-EEEEEcCCC----------------------cHHHHHHhc
Q 022560 202 RQEPWLVVLY-APWCQFCQ-AMEGSYVELADKLAGNGVK-VGKFRADGD----------------------QKEYAKQKL 256 (295)
Q Consensus 202 ~~k~vvV~Fy-a~wC~~C~-~~~p~~~~la~~~~~~~v~-~~~vd~~~~----------------------~~~l~~~~~ 256 (295)
+++++||+|| ++||++|. ...|.|.++.+++++.++. ++.|+.+.. +..++ +.|
T Consensus 34 ~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~v~~vv~Is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~-~~~ 112 (162)
T 1tp9_A 34 AGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKGVTEILCISVNDPFVMKAWAKSYPENKHVKFLADGSATYT-HAL 112 (162)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCCEEEEESSCHHHHHHHHHTCTTCSSEEEEECTTSHHH-HHT
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHhcCCCCCeEEEECCCchHH-HHc
Confidence 5789999999 89999999 8999999999998765688 888876531 13566 677
Q ss_pred CCC------C-----CCeEEEEeCCC
Q 022560 257 QLG------S-----FPTILFFPKHS 271 (295)
Q Consensus 257 ~V~------~-----~Pti~~~~~g~ 271 (295)
++. + .|+++++++|+
T Consensus 113 gv~~~~~~~g~~~~~~p~~~vid~G~ 138 (162)
T 1tp9_A 113 GLELDLQEKGLGTRSRRFALLVDDLK 138 (162)
T ss_dssp TCEEEETTTTSEEEECCEEEEEETTE
T ss_pred CcccccccCCCCccceeEEEEEECCE
Confidence 775 2 79999998443
No 238
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=98.45 E-value=5.9e-07 Score=73.06 Aligned_cols=89 Identities=12% Similarity=0.082 Sum_probs=65.1
Q ss_pred CCCcEEEEEE-CCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCC----------------------cHHHHHHhcCC
Q 022560 202 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD----------------------QKEYAKQKLQL 258 (295)
Q Consensus 202 ~~k~vvV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~----------------------~~~l~~~~~~V 258 (295)
++++++|+|| +.||++|....|.+.++.++ . ++.++.|+.+.. +..+. +.|++
T Consensus 45 ~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~-~--~~~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~-~~~gv 120 (166)
T 3p7x_A 45 AGKKKLISVVPSIDTGVCDQQTRKFNSDASK-E--EGIVLTISADLPFAQKRWCASAGLDNVITLSDHRDLSFG-ENYGV 120 (166)
T ss_dssp TTSCEEEEECSCTTSHHHHHHHHHHHHHSCT-T--TSEEEEEESSCHHHHHHHHHHHTCSSCEEEECTTTCHHH-HHHTC
T ss_pred CCCcEEEEEECCCCCCccHHHHHHHHHHhhc-C--CCEEEEEECCCHHHHHHHHHHcCCCceEEccCCchhHHH-HHhCC
Confidence 4789999999 78999999999999998777 3 588888876542 13555 66777
Q ss_pred CC------CCeEEEEeCCCCCeeecC----CCCCCHHHHHHHHHHh
Q 022560 259 GS------FPTILFFPKHSSKPIKYP----SERRDVDSLMAFVDAL 294 (295)
Q Consensus 259 ~~------~Pti~~~~~g~~~~~~~~----gg~~~~e~l~~fi~~l 294 (295)
.. .|++++++..+.+...+. ....+.+++.+.|+++
T Consensus 121 ~~~~~g~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~il~~l~~l 166 (166)
T 3p7x_A 121 VMEELRLLARAVFVLDADNKVVYKEIVSEGTDFPDFDAALAAYKNI 166 (166)
T ss_dssp EETTTTEECCEEEEECTTCBEEEEEECSBTTSCCCHHHHHHHHHTC
T ss_pred ccccCCceeeEEEEECCCCeEEEEEEcCCcccCCCHHHHHHHHhcC
Confidence 64 899999986665333322 1245678888888764
No 239
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=98.45 E-value=2.6e-07 Score=75.17 Aligned_cols=74 Identities=11% Similarity=0.087 Sum_probs=57.1
Q ss_pred CCCcEEEEEE-CCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCC----------------------cHHHHHHhcCC
Q 022560 202 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD----------------------QKEYAKQKLQL 258 (295)
Q Consensus 202 ~~k~vvV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~----------------------~~~l~~~~~~V 258 (295)
.++++||+|| +.||++|....|.|.++.+++ . ++.++.|+.+.. +..++ +.|++
T Consensus 42 ~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~-~-~v~vv~Is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~-~~~gv 118 (165)
T 1q98_A 42 ASKRKVLNIFPSIDTGVCATSVRKFNQQAAKL-S-NTIVLCISADLPFAQARFCGAEGIENAKTVSTFRNHALH-SQLGV 118 (165)
T ss_dssp TTSEEEEEECSCSCSSCCCHHHHHHHHHHHHS-T-TEEEEEEESSCHHHHTTCTTTTTCTTEEEEECTTCTHHH-HHTTC
T ss_pred CCCeEEEEEECCCCCCccHHHHHHHHHHHHHc-C-CCEEEEEeCCCHHHHHHHHHHcCCCceEEeeccccchHH-HHhCc
Confidence 4789999999 899999999999999999998 3 688888876531 14566 77887
Q ss_pred CC---------CCeEEEEeCCCCCeeecC
Q 022560 259 GS---------FPTILFFPKHSSKPIKYP 278 (295)
Q Consensus 259 ~~---------~Pti~~~~~g~~~~~~~~ 278 (295)
.. .|++++++..+.+...+.
T Consensus 119 ~~~~~~~~g~~~p~~~liD~~G~i~~~~~ 147 (165)
T 1q98_A 119 DIQTGPLAGLTSRAVIVLDEQNNVLHSQL 147 (165)
T ss_dssp EECSSTTTTSBCCEEEEECTTSBEEEEEE
T ss_pred eecccccCCccceeEEEEcCCCEEEEEEe
Confidence 53 499999986665444443
No 240
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=98.41 E-value=8.5e-07 Score=72.38 Aligned_cols=90 Identities=13% Similarity=0.166 Sum_probs=65.3
Q ss_pred CCCcEEEEEE-CCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCc--HHHHHHh-------------------cCCC
Q 022560 202 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ--KEYAKQK-------------------LQLG 259 (295)
Q Consensus 202 ~~k~vvV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~--~~l~~~~-------------------~~V~ 259 (295)
.++++||+|| ++||++|....|.+.++.+++ . ++.++.|+.+... ..++ ++ |++.
T Consensus 46 ~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~-~-~v~vv~Is~d~~~~~~~~~-~~~~~~~~~~l~D~~~~~~~~~gv~ 122 (171)
T 2yzh_A 46 KDVVQVIITVPSLDTPVCETETKKFNEIMAGM-E-GVDVTVVSMDLPFAQKRFC-ESFNIQNVTVASDFRYRDMEKYGVL 122 (171)
T ss_dssp CSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-T-TEEEEEEESSCHHHHHHHH-HHTTCCSSEEEECTTTCGGGGGTCB
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHc-C-CceEEEEeCCCHHHHHHHH-HHcCCCCeEEeecCccCcHHHhCCE
Confidence 4789999999 899999999999999999888 4 6999999887531 1222 23 3332
Q ss_pred ---------CCCeEEEEeCCCCCeeecCC----CCCCHHHHHHHHHHh
Q 022560 260 ---------SFPTILFFPKHSSKPIKYPS----ERRDVDSLMAFVDAL 294 (295)
Q Consensus 260 ---------~~Pti~~~~~g~~~~~~~~g----g~~~~e~l~~fi~~l 294 (295)
..|++++++..+.+...+.+ ...+.++|.+.|+++
T Consensus 123 ~~~~~~~g~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~ll~~l~~l 170 (171)
T 2yzh_A 123 IGEGALKGILARAVFIIDKEGKVAYVQLVPEITEEPNYDEVVNKVKEL 170 (171)
T ss_dssp BCSSTTTTSBCCEEEEECTTSBEEEEEECSBTTSCCCCHHHHHHHHHC
T ss_pred ecccccCCceeeEEEEEcCCCeEEEEEeCCCcCCCCCHHHHHHHHHhh
Confidence 15899999866654444432 245678899988876
No 241
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=98.41 E-value=9.3e-07 Score=76.56 Aligned_cols=91 Identities=14% Similarity=0.216 Sum_probs=68.7
Q ss_pred CcEEEEEE-CCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCC----------------------------cHHHHHH
Q 022560 204 EPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD----------------------------QKEYAKQ 254 (295)
Q Consensus 204 k~vvV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~----------------------------~~~l~~~ 254 (295)
+.+||+|| ++||++|....+.|.++.++|++.++.++.|++|.. +..++ +
T Consensus 30 ~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~~v~vigIS~D~~~~~~~~~~~i~~~~~~~~~~~fpil~D~~~~va-~ 108 (233)
T 2v2g_A 30 SWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKRGVKLIALSCDNVADHKEWSEDVKCLSGVKGDMPYPIIADETRELA-V 108 (233)
T ss_dssp SEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHHHHHHHTCCSSCSSCEEECTTCHHH-H
T ss_pred CeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHHHHhhCcccCCceEEEECChHHHH-H
Confidence 48889998 999999999999999999999776799998887642 12455 5
Q ss_pred hcCCC------------CCCeEEEEeCCCCCeeecCC---CCCCHHHHHHHHHHhC
Q 022560 255 KLQLG------------SFPTILFFPKHSSKPIKYPS---ERRDVDSLMAFVDALR 295 (295)
Q Consensus 255 ~~~V~------------~~Pti~~~~~g~~~~~~~~g---g~~~~e~l~~fi~~l~ 295 (295)
.|++. .+|++++++..+.+...+.+ ..++.++|.+.|++++
T Consensus 109 ~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~~~gr~~~eilr~l~~Lq 164 (233)
T 2v2g_A 109 KLGMVDPDERTSTGMPLTCRAVFIIGPDKKLKLSILYPATTGRNFSEILRVIDSLQ 164 (233)
T ss_dssp HTTCEEEEEECTTCCEEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HhCCcCcccccCCCcccccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 67764 57999999876654333322 1368999999998764
No 242
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=98.41 E-value=5.8e-07 Score=74.99 Aligned_cols=90 Identities=10% Similarity=0.156 Sum_probs=60.6
Q ss_pred CCCcE-EEEEECCCChhHHH-HHHHHHHHHHHhcCCCeE-EEEEEcCCC----------------------cHHHHHHhc
Q 022560 202 RQEPW-LVVLYAPWCQFCQA-MEGSYVELADKLAGNGVK-VGKFRADGD----------------------QKEYAKQKL 256 (295)
Q Consensus 202 ~~k~v-vV~Fya~wC~~C~~-~~p~~~~la~~~~~~~v~-~~~vd~~~~----------------------~~~l~~~~~ 256 (295)
+++++ |+.|+++||++|+. ..|.|.+++++|++.++. ++.|+.+.. +..++ +.|
T Consensus 55 ~Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~~~~~~f~~~~~~~~~fp~l~D~~~~va-~~y 133 (184)
T 3uma_A 55 KGKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILARGVDDIAVVAVNDLHVMGAWATHSGGMGKIHFLSDWNAAFT-KAI 133 (184)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCHHHHHHHHHHHTCTTTSEEEECTTCHHH-HHT
T ss_pred CCCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcCCCEEEEEECCCHHHHHHHHHHhCCCCceEEEEcCchHHH-HHc
Confidence 45654 55566999999999 799999999999876788 888887652 13466 677
Q ss_pred CCC-----------CCCeEEEEeCCCCCeeecCC---CCCCHHHHHHHHHH
Q 022560 257 QLG-----------SFPTILFFPKHSSKPIKYPS---ERRDVDSLMAFVDA 293 (295)
Q Consensus 257 ~V~-----------~~Pti~~~~~g~~~~~~~~g---g~~~~e~l~~fi~~ 293 (295)
++. ..|+.+++++|.. ...+.+ +..+..++.+.|++
T Consensus 134 Gv~~~~~~~g~g~~~~r~tfiIddG~I-~~~~~~~~~g~~~~~~~~~vL~~ 183 (184)
T 3uma_A 134 GMEIDLSAGTLGIRSKRYSMLVEDGVV-KALNIEESPGQATASGAAAMLEL 183 (184)
T ss_dssp TCEEEEGGGTCEEEECCEEEEEETTEE-EEEEECSSTTCCSTTSHHHHHHH
T ss_pred CCceeccccCCcccceeEEEEECCCEE-EEEEEeCCCCCCcCCCHHHHHhh
Confidence 774 3577888876542 222222 23445555555554
No 243
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=98.37 E-value=3.6e-06 Score=68.92 Aligned_cols=92 Identities=17% Similarity=0.305 Sum_probs=63.5
Q ss_pred CCCcEEEEEECCCCh-hHHHHHHHHHHHHHHhcC--CCeEEEEEEcCCC--cHH----HHHHhcC---------------
Q 022560 202 RQEPWLVVLYAPWCQ-FCQAMEGSYVELADKLAG--NGVKVGKFRADGD--QKE----YAKQKLQ--------------- 257 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~-~C~~~~p~~~~la~~~~~--~~v~~~~vd~~~~--~~~----l~~~~~~--------------- 257 (295)
++|+|||+||++||+ .|....+.+.++.+.++. .++.++.|.+|-. .++ +. ++|+
T Consensus 31 ~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvDp~~Dtp~~l~~y~-~~~~~~~~~~~~ltg~~~~ 109 (170)
T 4hde_A 31 KGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVDPDLDKPENLKAFI-QKFTEDTSNWNLLTGYSLE 109 (170)
T ss_dssp TTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHH-TTTCSCCTTEEEEBCSCHH
T ss_pred CCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecCcccccHHHHHHHH-HHcCCCCCCceecCcccHH
Confidence 589999999999996 799999999998888754 3688888877621 111 12 2222
Q ss_pred ---------------------CCCCCeEEEEeCCCCCeeecCCC-CCCHHHHHHHHHHh
Q 022560 258 ---------------------LGSFPTILFFPKHSSKPIKYPSE-RRDVDSLMAFVDAL 294 (295)
Q Consensus 258 ---------------------V~~~Pti~~~~~g~~~~~~~~gg-~~~~e~l~~fi~~l 294 (295)
+...|++++++..+.+...|.|. ....++|++-|++|
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~H~~~~~liD~~G~i~~~~~g~~~~~~~~l~~~ik~L 168 (170)
T 4hde_A 110 DITKFSKDNFQSLVDKPENGQVIHGTSFYLIDQNGKVMKKYSGISNTPYEDIIRDMKRL 168 (170)
T ss_dssp HHHHHHHHHHCCCCBCCTTSCCBCCCEEEEECTTSCEEEEEESSSSCCHHHHHHHHHHH
T ss_pred HHHHHHHhcccccccCCCCceEEeeeEEEEEcCCCeEEEEECCCCCCCHHHHHHHHHHH
Confidence 22347888887766545455542 35678888887765
No 244
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=98.35 E-value=7.1e-07 Score=73.15 Aligned_cols=45 Identities=16% Similarity=0.194 Sum_probs=38.9
Q ss_pred CCCcEEEEEE-CCCChhHHH-HHHHHHHHHHHhcCCCe-EEEEEEcCC
Q 022560 202 RQEPWLVVLY-APWCQFCQA-MEGSYVELADKLAGNGV-KVGKFRADG 246 (295)
Q Consensus 202 ~~k~vvV~Fy-a~wC~~C~~-~~p~~~~la~~~~~~~v-~~~~vd~~~ 246 (295)
+++++||.|| ++||++|+. ..|.|.++++++++.++ .++.|+.+.
T Consensus 30 ~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~ 77 (167)
T 2wfc_A 30 AGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKGVDIIACMAVND 77 (167)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHTTCCEEEEEESSC
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCC
Confidence 4678888887 999999999 99999999999976679 999998764
No 245
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=98.33 E-value=9e-07 Score=75.88 Aligned_cols=90 Identities=12% Similarity=0.218 Sum_probs=67.4
Q ss_pred cEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCC---------------------------cHHHHHHhcC
Q 022560 205 PWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD---------------------------QKEYAKQKLQ 257 (295)
Q Consensus 205 ~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~---------------------------~~~l~~~~~~ 257 (295)
.||+.|+++||++|....+.|.++.++|++.++.++.|++|.. +..++ +.|+
T Consensus 34 vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~vS~D~~~~~~~~~~~i~~~~~~~~~~fpil~D~~~~va-~~yg 112 (220)
T 1xcc_A 34 AILFSHPNDFTPVCTTELAELGKMHEDFLKLNCKLIGFSCNSKESHDKWIEDIKYYGKLNKWEIPIVCDESRELA-NKLK 112 (220)
T ss_dssp EEEECCSCTTCHHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHHTCSCCCCCEEECTTSHHH-HHHT
T ss_pred EEEEEECCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHHHhcCCCCcceeEECchhHHH-HHhC
Confidence 4555568999999999999999999999876799999987642 13456 6777
Q ss_pred CC------------CCCeEEEEeCCCCCeeecCC---CCCCHHHHHHHHHHhC
Q 022560 258 LG------------SFPTILFFPKHSSKPIKYPS---ERRDVDSLMAFVDALR 295 (295)
Q Consensus 258 V~------------~~Pti~~~~~g~~~~~~~~g---g~~~~e~l~~fi~~l~ 295 (295)
+. .+|++++++..+.+...+.+ ..++.++|.+.|++++
T Consensus 113 v~~~~~~~~~g~~~~~p~~flID~~G~I~~~~~~~~~~g~~~~ell~~i~~lq 165 (220)
T 1xcc_A 113 IMDEQEKDITGLPLTCRCLFFISPEKKIKATVLYPATTGRNAHEILRVLKSLQ 165 (220)
T ss_dssp CEEEEEECTTSCEEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred CCCcccccCCCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 73 47999999876654333321 1368999999998764
No 246
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=98.31 E-value=2.3e-07 Score=69.54 Aligned_cols=59 Identities=19% Similarity=0.247 Sum_probs=42.4
Q ss_pred EEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCc------HHHHHHhcCCCCCCeEEEEeCCC
Q 022560 206 WLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ------KEYAKQKLQLGSFPTILFFPKHS 271 (295)
Q Consensus 206 vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~------~~l~~~~~~V~~~Pti~~~~~g~ 271 (295)
.++.|+++||++|+.+.+.|.++...+.+ |..+|++.+. ..+. +.+++.++|++ |.+|+
T Consensus 13 ~v~~f~~~~C~~C~~~~~~L~~~~~~~~~----~~~vdi~~~~~~~~~~~~l~-~~~g~~~vP~i--~~~g~ 77 (105)
T 1kte_A 13 KVVVFIKPTCPFCRKTQELLSQLPFKEGL----LEFVDITATSDTNEIQDYLQ-QLTGARTVPRV--FIGKE 77 (105)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHSCBCTTS----EEEEEGGGSTTHHHHHHHHH-HHHSCCCSCEE--EETTE
T ss_pred CEEEEEcCCCHhHHHHHHHHHHcCCCCCc----cEEEEccCCCCHHHHHHHHH-HHhCCCCcCeE--EECCE
Confidence 36779999999999999999876543321 4455665541 2466 78999999997 34555
No 247
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=98.31 E-value=9.5e-06 Score=74.01 Aligned_cols=111 Identities=10% Similarity=0.051 Sum_probs=84.7
Q ss_pred CCCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcC-CCeEEEEEEcCCCcHHHHH---HhcC
Q 022560 182 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAG-NGVKVGKFRADGDQKEYAK---QKLQ 257 (295)
Q Consensus 182 ~~~v~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~-~~v~~~~vd~~~~~~~l~~---~~~~ 257 (295)
.+.|.++|.+++..+.. ...++..++.|+.++|+.|..+.+.+.++|+.+++ .++.|+.+|+++. ..++. +.|+
T Consensus 225 ~p~v~elt~~~~~~~~~-~~~~~~~~l~f~~~~~~~~~~~~~~~~~vA~~~~~~~~~~f~~id~~~~-~~~~~~~~~~~g 302 (350)
T 1sji_A 225 RPTLRRLRPEDMFETWE-DDLNGIHIVAFAERSDPDGYEFLEILKQVARDNTDNPDLSIVWIDPDDF-PLLVAYWEKTFK 302 (350)
T ss_dssp CCSEEECCTTTHHHHHH-SCSSSEEEEEECCTTSHHHHHHHHHHHHHHHHGGGCSSCCEEEECGGGC-HHHHHHHHHHCC
T ss_pred ccchhhcChhhHHHHhc-CCCCCcEEEEEEcCCCccHHHHHHHHHHHHHHhCCCCceEEEEECchhh-HHHHHHHHhhcC
Confidence 46788999999988764 11124456669999999999999999999999984 5699999999987 65551 4788
Q ss_pred CC-CCCeEEEEeCCCCCeee--cCC--CCCCHHHHHHHHHHh
Q 022560 258 LG-SFPTILFFPKHSSKPIK--YPS--ERRDVDSLMAFVDAL 294 (295)
Q Consensus 258 V~-~~Pti~~~~~g~~~~~~--~~g--g~~~~e~l~~fi~~l 294 (295)
+. .+|++++++..+..... +.+ +..+.++|.+||+.+
T Consensus 303 i~~~~P~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~F~~d~ 344 (350)
T 1sji_A 303 IDLFKPQIGVVNVTDADSVWMEIPDDDDLPTAEELEDWIEDV 344 (350)
T ss_dssp SCTTSCEEEEEESSSSCEEESCSSCCSCCCCHHHHHHHHHHH
T ss_pred CCccCCcEEEEecccccccccCCCcccccCCHHHHHHHHHHH
Confidence 97 58999999863321233 221 368999999999875
No 248
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=98.30 E-value=1.3e-06 Score=72.12 Aligned_cols=91 Identities=11% Similarity=0.093 Sum_probs=61.2
Q ss_pred CCCcEEEEEE-CCCChhHH-HHHHHHHHHHHHhcCCCeEEEE-EEcCCC----------------------cHHHHHHhc
Q 022560 202 RQEPWLVVLY-APWCQFCQ-AMEGSYVELADKLAGNGVKVGK-FRADGD----------------------QKEYAKQKL 256 (295)
Q Consensus 202 ~~k~vvV~Fy-a~wC~~C~-~~~p~~~~la~~~~~~~v~~~~-vd~~~~----------------------~~~l~~~~~ 256 (295)
+++++||.|| ++||++|. ...|.|.+++++|++.++.++. |..+.. +.+++ +.|
T Consensus 42 ~gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~gv~vv~~iS~D~~~~~~~f~~~~~~~~~fp~l~D~~~~va-~~y 120 (173)
T 3mng_A 42 KGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVVACLSVNDAFVTGEWGRAHKAEGKVRLLADPTGAFG-KET 120 (173)
T ss_dssp TTSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCHHHHHHHHHHTTCTTTCEEEECTTCHHH-HHH
T ss_pred CCCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEEcCCCHHHHHHHHHHhCCCCceEEEECCChHHH-HHh
Confidence 4666655555 99999999 5899999999999876777775 776542 13566 777
Q ss_pred CCC-------------CCCeEEEEeCCCCCeeecCC---CCCCHHHHHHHHHHh
Q 022560 257 QLG-------------SFPTILFFPKHSSKPIKYPS---ERRDVDSLMAFVDAL 294 (295)
Q Consensus 257 ~V~-------------~~Pti~~~~~g~~~~~~~~g---g~~~~e~l~~fi~~l 294 (295)
++. ..|+.+++++|. +...+.+ ..++..+....|++|
T Consensus 121 Gv~~~~~~~~~~g~~~~~r~tfvIDdG~-I~~~~v~~~~~g~~~~~~~~vl~~l 173 (173)
T 3mng_A 121 DLLLDDSLVSIFGNRRLKRFSMVVQDGI-VKALNVEPDGTGLTCSLAPNIISQL 173 (173)
T ss_dssp TCBCCSTTHHHHSSCCBCCEEEEEETTE-EEEEEECTTSSCSSTTSHHHHHHHC
T ss_pred CCCcccccccccCCcceEEEEEEEECCE-EEEEEEeCCCCCcchHHHHHHHHhC
Confidence 775 359999999443 2222222 135666666666543
No 249
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=98.29 E-value=7.1e-07 Score=68.32 Aligned_cols=58 Identities=14% Similarity=0.214 Sum_probs=44.3
Q ss_pred CcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeE---EEEEEcCCCc------HHHHHHhcCCCCCCeEEEEeCCC
Q 022560 204 EPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVK---VGKFRADGDQ------KEYAKQKLQLGSFPTILFFPKHS 271 (295)
Q Consensus 204 k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~---~~~vd~~~~~------~~l~~~~~~V~~~Pti~~~~~g~ 271 (295)
...|+.|+++||++|+.+.+.|.++. +. |..+|++.+. ..+. +.+++.++|++++ +|+
T Consensus 18 ~~~vv~f~~~~Cp~C~~~~~~L~~~~-------~~~~~~~~vdi~~~~~~~~~~~~l~-~~~g~~~vP~v~i--~g~ 84 (114)
T 2hze_A 18 NNKVTIFVKYTCPFCRNALDILNKFS-------FKRGAYEIVDIKEFKPENELRDYFE-QITGGKTVPRIFF--GKT 84 (114)
T ss_dssp TTCEEEEECTTCHHHHHHHHHHTTSC-------BCTTSEEEEEGGGSSSHHHHHHHHH-HHHSCCSSCEEEE--TTE
T ss_pred cCCEEEEEeCCChhHHHHHHHHHHcC-------CCcCceEEEEccCCCChHHHHHHHH-HHhCCCCcCEEEE--CCE
Confidence 34577899999999999999887642 44 7778887762 2677 7899999998743 554
No 250
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=98.29 E-value=1.1e-06 Score=74.18 Aligned_cols=72 Identities=11% Similarity=0.137 Sum_probs=56.0
Q ss_pred CCCcEEEEEE-CCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCC----------------------cHHHHHHhcCC
Q 022560 202 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD----------------------QKEYAKQKLQL 258 (295)
Q Consensus 202 ~~k~vvV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~----------------------~~~l~~~~~~V 258 (295)
+++++||+|| +.||++|....|.|.++.++| . ++.++.|+.|.. +..+. +.|++
T Consensus 77 ~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~-~-~v~vv~Is~D~~~~~~~~~~~~~~~~f~~l~D~~~~~~~-~~ygv 153 (200)
T 3zrd_A 77 AGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL-E-NTVVLCISSDLPFAQSRFCGAEGLSNVITLSTLRGADFK-QAYGV 153 (200)
T ss_dssp TTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS-T-TEEEEEEESSCHHHHTTCTTTTTCTTEEEEETTSCTHHH-HHTTC
T ss_pred CCCcEEEEEECCCCCchhHHHHHHHHHHHHHh-C-CCEEEEEECCCHHHHHHHHHHcCCCCceEEecCchHHHH-HHhCc
Confidence 5789999999 789999999999999999999 3 689998887542 13566 67777
Q ss_pred C---------CCCeEEEEeCCCCCeee
Q 022560 259 G---------SFPTILFFPKHSSKPIK 276 (295)
Q Consensus 259 ~---------~~Pti~~~~~g~~~~~~ 276 (295)
. ..|++++++..+.+...
T Consensus 154 ~~~~~~~~g~~~p~~~lID~~G~I~~~ 180 (200)
T 3zrd_A 154 AITEGPLAGLTARAVVVLDGQDNVIYS 180 (200)
T ss_dssp EECSSTTTTSBCCEEEEECTTSBEEEE
T ss_pred eeecccCCCccccEEEEECCCCeEEEE
Confidence 5 36999999766653333
No 251
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=98.22 E-value=2.8e-06 Score=61.70 Aligned_cols=55 Identities=22% Similarity=0.373 Sum_probs=43.4
Q ss_pred EEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcC--CCcHHHHHHhc-CCCCCCeEEEEeCCC
Q 022560 206 WLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD--GDQKEYAKQKL-QLGSFPTILFFPKHS 271 (295)
Q Consensus 206 vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~--~~~~~l~~~~~-~V~~~Pti~~~~~g~ 271 (295)
.++.|+++||++|+.+.+.+++. ++.|..+|++ .. .++. +.+ ++.++|+++ .+|+
T Consensus 7 ~v~~y~~~~C~~C~~~~~~L~~~-------~i~~~~vdv~~~~~-~~l~-~~~~~~~~vP~l~--~~g~ 64 (89)
T 2klx_A 7 EIILYTRPNCPYCKRARDLLDKK-------GVKYTDIDASTSLR-QEMV-QRANGRNTFPQIF--IGDY 64 (89)
T ss_dssp CEEEESCSCCTTTHHHHHHHHHH-------TCCEEEECSCHHHH-HHHH-HHHHSSCCSCEEE--ETTE
T ss_pred eEEEEECCCChhHHHHHHHHHHc-------CCCcEEEECCHHHH-HHHH-HHhCCCCCcCEEE--ECCE
Confidence 47789999999999999988775 3667788887 33 5677 788 999999984 3554
No 252
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=98.17 E-value=2.7e-05 Score=62.39 Aligned_cols=106 Identities=8% Similarity=0.130 Sum_probs=77.8
Q ss_pred CCceecCcccHHHHHhhcCCCCcEEEEEEC-CCChhHHHHHHHHHHHHHHhcCCCeEEEEEEc--CCCcHHHHHHhcCCC
Q 022560 183 QNLVTLNRTGMENLARLDHRQEPWLVVLYA-PWCQFCQAMEGSYVELADKLAGNGVKVGKFRA--DGDQKEYAKQKLQLG 259 (295)
Q Consensus 183 ~~v~~lt~~~f~~~i~~~~~~k~vvV~Fya-~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~--~~~~~~l~~~~~~V~ 259 (295)
+-|.++|.++...+.. ++-++.++++. .--..-..+.+.+.++|+.+++ ++.|+.+|. ++. ..+. +.||+.
T Consensus 14 PLV~e~t~en~~~~~~---~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~fkg-ki~Fv~vd~~~~~~-~~~l-~~fGl~ 87 (147)
T 3bj5_A 14 PLVIEFTEQTAPKIFG---GEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKG-KILFAFIDSDHTDN-QRIL-EFFGLK 87 (147)
T ss_dssp -CEEECCTTTHHHHHS---SSCCEEEEEECCTTSSSHHHHHHHHHHHHHTTTT-TCEEEEECTTCGGG-HHHH-HHTTCC
T ss_pred CeeEEeccccHHHHhc---CCCceEEEEEecCCcHhHHHHHHHHHHHHHHcCC-ceEEEEEecchHhH-HHHH-HHcCCC
Confidence 4588899999888764 45555544344 2333356688999999999998 899999998 555 5677 899998
Q ss_pred C--CCeEEEEeC-CCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 260 S--FPTILFFPK-HSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 260 ~--~Pti~~~~~-g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
. +|++.++.. +....+.+..+..+.+.|.+|++++
T Consensus 88 ~~~~P~v~i~~~~~~~~Ky~~~~~~~t~~~i~~Fv~d~ 125 (147)
T 3bj5_A 88 KEECPAVRLITLEEEMTKYKPESEELTAERITEFCHRF 125 (147)
T ss_dssp GGGCSEEEEEECSSSCEEECCSCCCCCHHHHHHHHHHH
T ss_pred cccCCEEEEEecccccccCCCCcccCCHHHHHHHHHHH
Confidence 5 999999975 3321344433478999999999874
No 253
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=98.17 E-value=2.7e-06 Score=62.06 Aligned_cols=71 Identities=10% Similarity=0.049 Sum_probs=51.4
Q ss_pred EEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCC----c----HHHHHHhcCCCCCCeEEEEeCCCCCeeec
Q 022560 206 WLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD----Q----KEYAKQKLQLGSFPTILFFPKHSSKPIKY 277 (295)
Q Consensus 206 vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~----~----~~l~~~~~~V~~~Pti~~~~~g~~~~~~~ 277 (295)
.++.|+++||++|+.+.+.+.++. +.+-.+|++.. . .++. +.+++.++|++++ +|+ .
T Consensus 13 ~v~ly~~~~Cp~C~~~~~~L~~~g-------i~~~~~~v~~~~~~~~~~~~~~l~-~~~g~~~vP~l~~--~g~--~--- 77 (92)
T 3ic4_A 13 EVLMYGLSTCPHCKRTLEFLKREG-------VDFEVIWIDKLEGEERKKVIEKVH-SISGSYSVPVVVK--GDK--H--- 77 (92)
T ss_dssp SSEEEECTTCHHHHHHHHHHHHHT-------CCCEEEEGGGCCHHHHHHHHHHHH-HHHSSSCSCEEEE--TTE--E---
T ss_pred eEEEEECCCChHHHHHHHHHHHcC-------CCcEEEEeeeCCccchHHHHHHHH-HhcCCCCcCEEEE--CCE--E---
Confidence 367799999999999999887752 44455666531 1 4555 6789999999987 553 2
Q ss_pred CCCCCCHHHHHHHHH
Q 022560 278 PSERRDVDSLMAFVD 292 (295)
Q Consensus 278 ~gg~~~~e~l~~fi~ 292 (295)
.+| .+.++|.++|+
T Consensus 78 i~G-~~~~~l~~~l~ 91 (92)
T 3ic4_A 78 VLG-YNEEKLKELIR 91 (92)
T ss_dssp EES-CCHHHHHHHHH
T ss_pred EeC-CCHHHHHHHhc
Confidence 232 68999999886
No 254
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=98.16 E-value=4e-06 Score=69.79 Aligned_cols=42 Identities=10% Similarity=0.267 Sum_probs=36.6
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEc
Q 022560 202 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRA 244 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~ 244 (295)
.++++|+.|+.+|||+|+.+.|.+.++.+.+.+ .+.|..+.+
T Consensus 21 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~ 62 (195)
T 2znm_A 21 SGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPS-DAYLRTEHV 62 (195)
T ss_dssp SSSEEEEEEECTTSCCTTSSCHHHHHHHHHSCT-TEEEEEEEC
T ss_pred CCCcEEEEEECCCChhHHHHhHHHHHHHHHCCC-ceEEEEecc
Confidence 467899999999999999999999999999876 677776664
No 255
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=98.16 E-value=2.2e-06 Score=70.42 Aligned_cols=43 Identities=19% Similarity=0.236 Sum_probs=37.2
Q ss_pred CcEEEEEECCCChhHHHH-HHHHHHHHHHhcCCCeE-EEEEEcCC
Q 022560 204 EPWLVVLYAPWCQFCQAM-EGSYVELADKLAGNGVK-VGKFRADG 246 (295)
Q Consensus 204 k~vvV~Fya~wC~~C~~~-~p~~~~la~~~~~~~v~-~~~vd~~~ 246 (295)
+.||+.||++||++|+.. .|.|.+++++|++.++. ++.|+.+.
T Consensus 45 ~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~g~~~vv~Is~d~ 89 (171)
T 2pwj_A 45 KVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAKGVDSVICVAIND 89 (171)
T ss_dssp EEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHTTCSEEEEEESSC
T ss_pred CEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCC
Confidence 477888999999999998 99999999998765688 88888764
No 256
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=98.15 E-value=8e-07 Score=74.97 Aligned_cols=44 Identities=23% Similarity=0.464 Sum_probs=40.6
Q ss_pred CCcEEEEEECCCChhHHHHHHHH---HHHHHHhcCCCeEEEEEEcCCC
Q 022560 203 QEPWLVVLYAPWCQFCQAMEGSY---VELADKLAGNGVKVGKFRADGD 247 (295)
Q Consensus 203 ~k~vvV~Fya~wC~~C~~~~p~~---~~la~~~~~~~v~~~~vd~~~~ 247 (295)
++++||.||+.||++|+.+.|.+ +++++.+++ ++.|.+++++.+
T Consensus 113 ~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~-~v~~~~~~v~~~ 159 (197)
T 1un2_A 113 GAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPE-GVKMTKYHVNFM 159 (197)
T ss_dssp TCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCT-TCCEEEEECSSS
T ss_pred CCCEEEEEECCCChhHHHhCcccccHHHHHHHCCC-CCEEEEeccCcC
Confidence 57899999999999999999999 999999987 799999999875
No 257
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=98.15 E-value=3.5e-06 Score=67.61 Aligned_cols=66 Identities=9% Similarity=0.170 Sum_probs=46.0
Q ss_pred ccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCC--cH----HHHHHhcCCCCCCeE
Q 022560 191 TGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD--QK----EYAKQKLQLGSFPTI 264 (295)
Q Consensus 191 ~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~--~~----~l~~~~~~V~~~Pti 264 (295)
+.+.+++. .+ .|+ .|+++||++|+.+.+.|.++. +.|..+|++.. .. .+. +.+++.++|++
T Consensus 40 ~~~~~~i~---~~-~Vv-vf~~~~Cp~C~~~k~~L~~~~-------i~~~~vdId~~~~~~~~~~~L~-~~~g~~tvP~i 106 (146)
T 2ht9_A 40 NQIQETIS---DN-CVV-IFSKTSCSYCTMAKKLFHDMN-------VNYKVVELDLLEYGNQFQDALY-KMTGERTVPRI 106 (146)
T ss_dssp HHHHHHHH---HC-SEE-EEECTTCHHHHHHHHHHHHHT-------CCCEEEEGGGCTTHHHHHHHHH-HHHSCCCSCEE
T ss_pred HHHHHHhc---CC-CEE-EEECCCChhHHHHHHHHHHcC-------CCeEEEECccCcCCHHHHHHHH-HHhCCCCcCeE
Confidence 45666664 23 444 499999999999999998762 44556666543 12 367 78999999998
Q ss_pred EEEeCCC
Q 022560 265 LFFPKHS 271 (295)
Q Consensus 265 ~~~~~g~ 271 (295)
+ .+|+
T Consensus 107 f--i~G~ 111 (146)
T 2ht9_A 107 F--VNGT 111 (146)
T ss_dssp E--ETTE
T ss_pred E--ECCE
Confidence 4 3554
No 258
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.14 E-value=3.6e-05 Score=63.71 Aligned_cols=105 Identities=12% Similarity=0.069 Sum_probs=76.9
Q ss_pred ecCcccHHHHHhhc-----CCCCcEEEEEECCCChhHHHHHHHH---HHHHHHhcCCCeEEEEEEcCCCc----------
Q 022560 187 TLNRTGMENLARLD-----HRQEPWLVVLYAPWCQFCQAMEGSY---VELADKLAGNGVKVGKFRADGDQ---------- 248 (295)
Q Consensus 187 ~lt~~~f~~~i~~~-----~~~k~vvV~Fya~wC~~C~~~~p~~---~~la~~~~~~~v~~~~vd~~~~~---------- 248 (295)
.+-...|+++++.+ .+.|.++|+++++||..|..+...+ +++.+.++. ++.+...|++...
T Consensus 34 ~F~~gs~~~Al~~A~~~~k~e~K~LlVyLhs~~~~~~~~f~~~~L~~~~V~~~l~~-nfV~w~~dv~~~e~~~~~~~~~~ 112 (178)
T 2ec4_A 34 VFFIGSLEAAFQEAFYVKARDRKLLAIYLHHDESVLTNVFCSQMLCAESIVSYLSQ-NFITWAWDLTKDSNRARFLTMCN 112 (178)
T ss_dssp CCCCSCHHHHHHTTTSSCTTTCCEEEEEEECSSCSHHHHHHHHTTTCHHHHHHHHH-TEEEEEEECCSHHHHHHHHHHHH
T ss_pred CeeeCCHHHHHHHHHhhhhhhCcEEEEEEeCCCCccHHHHHHHhcCCHHHHHHHHc-CEEEEEEeCCCchhhhhhhhhhh
Confidence 34566777777654 4689999999999999999998655 556666666 7999999998762
Q ss_pred ----HHHHH--HhcCCCCCCeEEEEeCCC---CCeeecCCCCCCHHHHHHHHHH
Q 022560 249 ----KEYAK--QKLQLGSFPTILFFPKHS---SKPIKYPSERRDVDSLMAFVDA 293 (295)
Q Consensus 249 ----~~l~~--~~~~V~~~Pti~~~~~g~---~~~~~~~gg~~~~e~l~~fi~~ 293 (295)
..++. +.|++.++|++.++...+ +.+....| ..++++|.+.|.+
T Consensus 113 ~~~g~~~a~~~~~~~~~~~P~l~ii~~~~~~~~vl~~~~G-~~~~~~ll~~L~~ 165 (178)
T 2ec4_A 113 RHFGSVVAQTIRTQKTDQFPLFLIIMGKRSSNEVLNVIQG-NTTVDELMMRLMA 165 (178)
T ss_dssp HHTCHHHHHHHHHSCSTTCSEEEEECCCSSCCCEEEEECS-CCCHHHHHHHHHH
T ss_pred hhhHHHHHHHHhhcCCCCCCeEEEEEcCCCceEEEEEEeC-CCCHHHHHHHHHH
Confidence 12330 238999999999996432 22344555 7999999887754
No 259
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=98.14 E-value=6.1e-06 Score=60.84 Aligned_cols=74 Identities=15% Similarity=0.324 Sum_probs=53.0
Q ss_pred EEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHH---Hh-cCCCCCCeEEEEeCCCCCeeecCCCC
Q 022560 206 WLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAK---QK-LQLGSFPTILFFPKHSSKPIKYPSER 281 (295)
Q Consensus 206 vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~---~~-~~V~~~Pti~~~~~g~~~~~~~~gg~ 281 (295)
-|+.|..+|||+|+..+..|.+. ++.|-.+|++++ ++... +. .+.+++|++++ .+|. +. + .
T Consensus 5 ~I~vYs~~~Cp~C~~aK~~L~~~-------gi~y~~idi~~d-~~~~~~~~~~~~G~~tVP~I~i-~Dg~--~l---~-~ 69 (92)
T 2lqo_A 5 ALTIYTTSWCGYCLRLKTALTAN-------RIAYDEVDIEHN-RAAAEFVGSVNGGNRTVPTVKF-ADGS--TL---T-N 69 (92)
T ss_dssp CEEEEECTTCSSHHHHHHHHHHT-------TCCCEEEETTTC-HHHHHHHHHHSSSSSCSCEEEE-TTSC--EE---E-S
T ss_pred cEEEEcCCCCHhHHHHHHHHHhc-------CCceEEEEcCCC-HHHHHHHHHHcCCCCEeCEEEE-eCCE--EE---e-C
Confidence 37789999999999988877652 588899999987 54431 22 26789999754 4554 22 1 2
Q ss_pred CCHHHHHHHHHHh
Q 022560 282 RDVDSLMAFVDAL 294 (295)
Q Consensus 282 ~~~e~l~~fi~~l 294 (295)
.+.++|.+.|.++
T Consensus 70 ~~~~el~~~L~el 82 (92)
T 2lqo_A 70 PSADEVKAKLVKI 82 (92)
T ss_dssp CCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHh
Confidence 5778898888765
No 260
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.13 E-value=4.3e-06 Score=65.55 Aligned_cols=67 Identities=10% Similarity=0.165 Sum_probs=46.4
Q ss_pred cccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCC--cH----HHHHHhcCCCCCCe
Q 022560 190 RTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD--QK----EYAKQKLQLGSFPT 263 (295)
Q Consensus 190 ~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~--~~----~l~~~~~~V~~~Pt 263 (295)
.+.+.+++. .+ .| +.|+++||++|+.+.+.|.++. +.|..+|++.. .. .+. +.+++.++|+
T Consensus 17 ~~~~~~~i~---~~-~v-vvf~~~~Cp~C~~~~~~L~~~~-------i~~~~vdid~~~~~~~~~~~l~-~~~g~~~vP~ 83 (130)
T 2cq9_A 17 VNQIQETIS---DN-CV-VIFSKTSCSYCTMAKKLFHDMN-------VNYKVVELDLLEYGNQFQDALY-KMTGERTVPR 83 (130)
T ss_dssp HHHHHHHHH---HS-SE-EEEECSSCSHHHHHHHHHHHHT-------CCCEEEETTTSTTHHHHHHHHH-HHHSSCCSSE
T ss_pred HHHHHHHHc---CC-cE-EEEEcCCChHHHHHHHHHHHcC-------CCcEEEECcCCcCcHHHHHHHH-HHhCCCCcCE
Confidence 344566554 33 34 4499999999999999998762 45566676654 12 366 7899999999
Q ss_pred EEEEeCCC
Q 022560 264 ILFFPKHS 271 (295)
Q Consensus 264 i~~~~~g~ 271 (295)
++ .+|+
T Consensus 84 l~--i~G~ 89 (130)
T 2cq9_A 84 IF--VNGT 89 (130)
T ss_dssp EE--ETTE
T ss_pred EE--ECCE
Confidence 84 3554
No 261
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=98.13 E-value=5.8e-06 Score=62.15 Aligned_cols=65 Identities=15% Similarity=0.290 Sum_probs=47.0
Q ss_pred ccHHHHHhhcCCCCcEEEEEEC-----CCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHH----HHHHhcCCCCC
Q 022560 191 TGMENLARLDHRQEPWLVVLYA-----PWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKE----YAKQKLQLGSF 261 (295)
Q Consensus 191 ~~f~~~i~~~~~~k~vvV~Fya-----~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~----l~~~~~~V~~~ 261 (295)
+.+++++. ...|+| |++ +||++|+.+.+.|.++ ++.|..+|++++ +. +. ..+++.++
T Consensus 8 ~~~~~~i~----~~~vvv-f~~g~~~~~~C~~C~~~~~~L~~~-------~i~~~~vdi~~~-~~~~~~l~-~~~g~~~v 73 (105)
T 2yan_A 8 ERLKVLTN----KASVML-FMKGNKQEAKCGFSKQILEILNST-------GVEYETFDILED-EEVRQGLK-AYSNWPTY 73 (105)
T ss_dssp HHHHHHHT----SSSEEE-EESBCSSSBCTTHHHHHHHHHHHH-------TCCCEEEEGGGC-HHHHHHHH-HHHTCCSS
T ss_pred HHHHHHhc----cCCEEE-EEecCCCCCCCccHHHHHHHHHHC-------CCCeEEEECCCC-HHHHHHHH-HHHCCCCC
Confidence 34555553 334555 777 9999999999999775 377888999887 54 44 56789999
Q ss_pred CeEEEEeCCC
Q 022560 262 PTILFFPKHS 271 (295)
Q Consensus 262 Pti~~~~~g~ 271 (295)
|++ |.+|+
T Consensus 74 P~v--~i~g~ 81 (105)
T 2yan_A 74 PQL--YVKGE 81 (105)
T ss_dssp CEE--EETTE
T ss_pred CeE--EECCE
Confidence 998 34665
No 262
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=98.12 E-value=1.8e-05 Score=72.83 Aligned_cols=111 Identities=10% Similarity=0.030 Sum_probs=85.1
Q ss_pred CCCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCC-CeEEEEEEcCCCcHHHH---HHhcC
Q 022560 182 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGN-GVKVGKFRADGDQKEYA---KQKLQ 257 (295)
Q Consensus 182 ~~~v~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~-~v~~~~vd~~~~~~~l~---~~~~~ 257 (295)
.+.|.+++.+++..+... ...++.+|.|+.++|..+..+.+.+.++|+.+++. ++.|+.+|+++. .... .+.|+
T Consensus 227 ~p~v~elt~~~~~~~~~~-~~~~~~~~~f~~~~~~~~~~~~~~l~~vA~~~~~~~ki~F~~id~~~~-~~~l~~~~~~fg 304 (367)
T 3us3_A 227 RSTLRKLKPESMYETWED-DMDGIHIVAFAEEADPDGYEFLEILKSVAQDNTDNPDLSIIWIDPDDF-PLLVPYWEKTFD 304 (367)
T ss_dssp SCSEEECCGGGHHHHHHS-CBTTEEEEEECCTTSHHHHHHHHHHHHHHHHTTTCTTCCEEEECGGGC-TTTHHHHHHHHT
T ss_pred ccceeecChhhHHHHHhh-ccCCcEEEEEEcCCChhHHHHHHHHHHHHHHcCCCCceEEEEECCccc-hhHHHHHHHhcC
Confidence 356889999998777641 11346778899999999999999999999999984 699999999987 4322 14588
Q ss_pred CC-CCCeEEEEeCCCC--CeeecCC--CCCCHHHHHHHHHHh
Q 022560 258 LG-SFPTILFFPKHSS--KPIKYPS--ERRDVDSLMAFVDAL 294 (295)
Q Consensus 258 V~-~~Pti~~~~~g~~--~~~~~~g--g~~~~e~l~~fi~~l 294 (295)
+. .+|++++++.... ....+.+ +..+.++|.+||+++
T Consensus 305 l~~~~P~~~i~~~~~~~~~~y~~~~~~~~~t~~~i~~F~~~~ 346 (367)
T 3us3_A 305 IDLSAPQIGVVNVTDADSVWMEMDDEEDLPSAEELEDWLEDV 346 (367)
T ss_dssp CCTTSCEEEEEETTTCCEEECCCCTTSCCCCHHHHHHHHHHH
T ss_pred CCCCCCeEEEEecccccceeecCCcccccCCHHHHHHHHHHH
Confidence 87 8999999986543 1233333 368999999999875
No 263
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=98.10 E-value=8e-06 Score=60.96 Aligned_cols=60 Identities=22% Similarity=0.331 Sum_probs=44.9
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHH---HHhc-CCCCCCeEEEEeCCC
Q 022560 202 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYA---KQKL-QLGSFPTILFFPKHS 271 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~---~~~~-~V~~~Pti~~~~~g~ 271 (295)
+.+.-|+.|+++||++|+.+++.|+++ ++.|..+|++.+ ++.. .+.. +..++|++ |.+|+
T Consensus 13 ~~~~~v~vy~~~~Cp~C~~ak~~L~~~-------~i~y~~idI~~~-~~~~~~l~~~~~g~~~vP~i--fi~g~ 76 (99)
T 3qmx_A 13 AVSAKIEIYTWSTCPFCMRALALLKRK-------GVEFQEYCIDGD-NEAREAMAARANGKRSLPQI--FIDDQ 76 (99)
T ss_dssp CCCCCEEEEECTTCHHHHHHHHHHHHH-------TCCCEEEECTTC-HHHHHHHHHHTTTCCCSCEE--EETTE
T ss_pred cCCCCEEEEEcCCChhHHHHHHHHHHC-------CCCCEEEEcCCC-HHHHHHHHHHhCCCCCCCEE--EECCE
Confidence 445667789999999999999999875 367788888887 5443 0333 89999987 44664
No 264
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=98.10 E-value=1.7e-05 Score=64.76 Aligned_cols=42 Identities=14% Similarity=0.128 Sum_probs=35.0
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHh--cCCCeEEEEEEc
Q 022560 202 RQEPWLVVLYAPWCQFCQAMEGSYVELADKL--AGNGVKVGKFRA 244 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~--~~~~v~~~~vd~ 244 (295)
..+.+|+.|+..+||+|+.+.+.+.++.+.| .+ +|.|...++
T Consensus 26 ~a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~~~-~v~~~~~~~ 69 (175)
T 1z6m_A 26 NAPVKMIEFINVRCPYCRKWFEESEELLAQSVKSG-KVERIIKLF 69 (175)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHTT-SEEEEEEEC
T ss_pred CCCeEEEEEECCCCcchHHHHHHHHHHHHHHhhCC-cEEEEEEeC
Confidence 4577899999999999999999999988888 55 577776554
No 265
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=98.06 E-value=2.9e-05 Score=67.51 Aligned_cols=98 Identities=10% Similarity=0.222 Sum_probs=77.4
Q ss_pred CCceecC-cccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCC
Q 022560 183 QNLVTLN-RTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSF 261 (295)
Q Consensus 183 ~~v~~lt-~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~ 261 (295)
+.|..|+ .+++++++. .++.++|-|+++| |....+.|.++|+.+.+ .+.|+.+. + .+++ ++|++..
T Consensus 6 P~v~~l~s~~~~~~~l~---~~~v~vvgff~~~---~~~~~~~f~~~A~~lr~-~~~F~~~~---~-~~v~-~~~~~~~- 72 (252)
T 2h8l_A 6 PASVPLRTEEEFKKFIS---DKDASIVGFFDDS---FSEAHSEFLKAASNLRD-NYRFAHTN---V-ESLV-NEYDDNG- 72 (252)
T ss_dssp CCEEECCSHHHHHHHHT---SSSCEEEEEESCT---TSHHHHHHHHHHHHTTT-TSCEEEEC---C-HHHH-HHHCSSS-
T ss_pred CCceeecCHHHHHHHhh---cCCeEEEEEECCC---CChHHHHHHHHHHhccc-CcEEEEEC---h-HHHH-HHhCCCC-
Confidence 4577785 467777775 6788999999998 45577899999999977 68888773 3 6788 8999997
Q ss_pred CeEEEEeCCC------CCeeec-CCCCCCHHHHHHHHHHh
Q 022560 262 PTILFFPKHS------SKPIKY-PSERRDVDSLMAFVDAL 294 (295)
Q Consensus 262 Pti~~~~~g~------~~~~~~-~gg~~~~e~l~~fi~~l 294 (295)
|++++|+++. .....| .| ..+.++|.+||...
T Consensus 73 p~i~~fk~~~~~~kf~e~~~~y~~g-~~~~~~l~~fi~~~ 111 (252)
T 2h8l_A 73 EGIILFRPSHLTNKFEDKTVAYTEQ-KMTSGKIKKFIQEN 111 (252)
T ss_dssp EEEEEECCGGGCCTTSCSEEECCCS-SCCHHHHHHHHHHH
T ss_pred CcEEEEcchhhcccccccccccCCC-CcCHHHHHHHHHhc
Confidence 9999998641 236778 77 68999999999863
No 266
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=98.06 E-value=3.3e-06 Score=65.14 Aligned_cols=69 Identities=14% Similarity=0.246 Sum_probs=48.4
Q ss_pred ccHHHHHhhcCCCCcEEEEEECCCChhHHHH-HHHHHHHHHHhcCCCeEEEEEEcCCCc------HHHHHHhcCCCCCCe
Q 022560 191 TGMENLARLDHRQEPWLVVLYAPWCQFCQAM-EGSYVELADKLAGNGVKVGKFRADGDQ------KEYAKQKLQLGSFPT 263 (295)
Q Consensus 191 ~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~-~p~~~~la~~~~~~~v~~~~vd~~~~~------~~l~~~~~~V~~~Pt 263 (295)
+.+++++. .. .|+.|+++||++|+.+ .+.|.++.. ..+.|..+|++.+. ..+. +.+++.++|+
T Consensus 16 ~~~~~~i~---~~--~Vvvf~~~~Cp~C~~alk~~L~~~~~----~~i~~~~vdid~~~~~~~~~~~l~-~~~g~~tvP~ 85 (118)
T 3c1r_A 16 KHVKDLIA---EN--EIFVASKTYCPYCHAALNTLFEKLKV----PRSKVLVLQLNDMKEGADIQAALY-EINGQRTVPN 85 (118)
T ss_dssp HHHHHHHH---HS--SEEEEECSSCHHHHHHHHHHHTTSCC----CGGGEEEEEGGGSTTHHHHHHHHH-HHHSCCSSCE
T ss_pred HHHHHHHc---cC--cEEEEEcCCCcCHHHHHHHHHHHcCC----CCCCeEEEECccCCChHHHHHHHH-HHhCCCCcCE
Confidence 44555554 22 3666999999999998 777765431 13778888888752 2566 7899999998
Q ss_pred EEEEeCCC
Q 022560 264 ILFFPKHS 271 (295)
Q Consensus 264 i~~~~~g~ 271 (295)
+ |.+|+
T Consensus 86 v--fi~g~ 91 (118)
T 3c1r_A 86 I--YINGK 91 (118)
T ss_dssp E--EETTE
T ss_pred E--EECCE
Confidence 7 45665
No 267
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=98.05 E-value=4.1e-05 Score=63.37 Aligned_cols=41 Identities=15% Similarity=0.246 Sum_probs=35.5
Q ss_pred CCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEc
Q 022560 203 QEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRA 244 (295)
Q Consensus 203 ~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~ 244 (295)
.+.+|+.|+.++||+|..+.+.+.++.+.+.+ +|.|..+.+
T Consensus 25 a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~ 65 (193)
T 2rem_A 25 GKIEVVEIFGYTCPHCAHFDSKLQAWGARQAK-DVRFTLVPA 65 (193)
T ss_dssp TCEEEEEEECTTCHHHHHHHHHHHHHHHTSCT-TEEEEEEEC
T ss_pred CCeEEEEEECCCChhHhhhhHHHHHHHHhcCC-ceEEEEeCc
Confidence 56789999999999999999999999988876 677776654
No 268
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=98.03 E-value=1.2e-05 Score=60.19 Aligned_cols=74 Identities=14% Similarity=0.157 Sum_probs=49.7
Q ss_pred CcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCc----HHHH---HHhcCCCCCCeEEEEeCCCCCeee
Q 022560 204 EPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ----KEYA---KQKLQLGSFPTILFFPKHSSKPIK 276 (295)
Q Consensus 204 k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~----~~l~---~~~~~V~~~Pti~~~~~g~~~~~~ 276 (295)
+..++.|+++||++|+.+++.|.++. +.+-.+|++..+ .++. ++..++.++|++++ +|+.
T Consensus 21 ~~~v~ly~~~~Cp~C~~ak~~L~~~~-------i~y~~vdI~~~~~~~~~~~~~~l~~~~g~~~vP~l~i--~~~~---- 87 (103)
T 3nzn_A 21 RGKVIMYGLSTCVWCKKTKKLLTDLG-------VDFDYVYVDRLEGKEEEEAVEEVRRFNPSVSFPTTII--NDEK---- 87 (103)
T ss_dssp CSCEEEEECSSCHHHHHHHHHHHHHT-------BCEEEEEGGGCCHHHHHHHHHHHHHHCTTCCSCEEEE--TTTE----
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHcC-------CCcEEEEeeccCcccHHHHHHHHHHhCCCCccCEEEE--CCCE----
Confidence 44577799999999999999987752 455556666421 2222 03468999999876 3321
Q ss_pred cCCCCCCHHHHHHHH
Q 022560 277 YPSERRDVDSLMAFV 291 (295)
Q Consensus 277 ~~gg~~~~e~l~~fi 291 (295)
+.| ..+.++|.++|
T Consensus 88 ~ig-g~~~~~l~~~L 101 (103)
T 3nzn_A 88 AIV-GFKEKEIRESL 101 (103)
T ss_dssp EEE-SCCHHHHHHHT
T ss_pred EEE-cCCHHHHHHHh
Confidence 234 37888888876
No 269
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=98.02 E-value=2.2e-05 Score=64.18 Aligned_cols=41 Identities=22% Similarity=0.478 Sum_probs=34.5
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEE
Q 022560 202 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFR 243 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd 243 (295)
.++++||.|+.-.||+|+.+.+.+.++.+.+.+ .+.+..+.
T Consensus 20 ~~~~~vvEf~dy~Cp~C~~~~~~~~~l~~~~~~-~~~~~~~~ 60 (184)
T 4dvc_A 20 SSSPVVSEFFSFYCPHCNTFEPIIAQLKQQLPE-GAKFQKNH 60 (184)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHTSCT-TCEEEEEE
T ss_pred CCCCEEEEEECCCCHhHHHHhHHHHHHHhhcCC-ceEEEEEe
Confidence 467899999999999999999999999998877 55665543
No 270
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=98.01 E-value=1.5e-05 Score=63.97 Aligned_cols=80 Identities=18% Similarity=0.356 Sum_probs=59.2
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCC-----------------------------------
Q 022560 202 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG----------------------------------- 246 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~----------------------------------- 246 (295)
..+.+|+.|..++|++|+++.+.+.++ . ++.+..++..-
T Consensus 13 ~a~~~vv~f~D~~Cp~C~~~~~~l~~l----~--~v~v~~~~~P~~~~~~~s~~~a~a~~ca~d~~~a~~~~~~~g~~~~ 86 (147)
T 3gv1_A 13 NGKLKVAVFSDPDCPFCKRLEHEFEKM----T--DVTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDWMRKGKFPV 86 (147)
T ss_dssp TCCEEEEEEECTTCHHHHHHHHHHTTC----C--SEEEEEEECCCTTTCTTHHHHHHHHHTSSSHHHHHHHHHHHCCCCT
T ss_pred CCCEEEEEEECCCChhHHHHHHHHhhc----C--ceEEEEEEccccccChhHHHHHHHHHcCCCHHHHHHHHHhCCCCCC
Confidence 567899999999999999999998764 2 35555443210
Q ss_pred ----------CcHHHHHHhcCCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 247 ----------DQKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 247 ----------~~~~l~~~~~~V~~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
.+..++ ++++|+++||+++ .+|+ . ..| ..+.+.|.++|++.
T Consensus 87 ~~~~~~~~v~~~~~la-~~~gI~gtPt~vi-~nG~--~--i~G-~~~~~~l~~~i~~~ 137 (147)
T 3gv1_A 87 GGSICDNPVAETTSLG-EQFGFNGTPTLVF-PNGR--T--QSG-YSPMPQLEEIIRKN 137 (147)
T ss_dssp TCCCCSCSHHHHHHHH-HHTTCCSSCEEEC-TTSC--E--EES-CCCTTHHHHHHHHT
T ss_pred ccHHHHHHHHHHHHHH-HHhCCCccCEEEE-ECCE--E--eeC-CCCHHHHHHHHHHH
Confidence 014667 7899999999998 5665 2 345 67889999998865
No 271
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=98.00 E-value=3.4e-05 Score=67.07 Aligned_cols=99 Identities=8% Similarity=0.079 Sum_probs=78.0
Q ss_pred CCceecCc-ccHHHHHhhcCC-CCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCC
Q 022560 183 QNLVTLNR-TGMENLARLDHR-QEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGS 260 (295)
Q Consensus 183 ~~v~~lt~-~~f~~~i~~~~~-~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~ 260 (295)
+.|..|++ +++++++. . ++.+||-|++++| ....+.|.++|+.+.+ .+.|+... + .+++ .+|++..
T Consensus 6 P~v~~l~s~~~~~~~~~---~~~~v~vVgff~~~~---~~~~~~F~~~A~~lr~-~~~F~~t~---~-~~v~-~~~~v~~ 73 (250)
T 3ec3_A 6 PPSKEILTLKQVQEFLK---DGDDVVILGVFQGVG---DPGYLQYQDAANTLRE-DYKFHHTF---S-TEIA-KFLKVSL 73 (250)
T ss_dssp CSSEECCCHHHHHHHHH---HCSSCEEEEECSCTT---CHHHHHHHHHHHHHTT-TCCEEEEC---C-HHHH-HHHTCCS
T ss_pred CCceecCCHHHHHHHHh---cCCCeEEEEEEcCCC---chHHHHHHHHHHhhhc-CcEEEEEC---c-HHHH-HHcCCCC
Confidence 45777755 78888776 5 7899999999984 5678899999999977 68888764 3 6788 8899987
Q ss_pred CCeEEEEeCC------CCCeeecCC-CCCCHHHHHHHHHHh
Q 022560 261 FPTILFFPKH------SSKPIKYPS-ERRDVDSLMAFVDAL 294 (295)
Q Consensus 261 ~Pti~~~~~g------~~~~~~~~g-g~~~~e~l~~fi~~l 294 (295)
|++++|+++ ......|.| +..+.++|.+||...
T Consensus 74 -p~ivlfk~~~~~~kfde~~~~y~g~~~~~~~~l~~fi~~~ 113 (250)
T 3ec3_A 74 -GKLVLMQPEKFQSKYEPRMHVMDVQGSTEASAIKDYVVKH 113 (250)
T ss_dssp -SEEEEECCGGGCCTTSCSCEEEECCTTSCHHHHHHHHHHH
T ss_pred -CeEEEEecchhhccccccceeccCCCCCCHHHHHHHHHHc
Confidence 999999863 122567775 478999999999763
No 272
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=97.91 E-value=2.8e-05 Score=54.98 Aligned_cols=69 Identities=19% Similarity=0.345 Sum_probs=48.6
Q ss_pred EEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCc---HHHHHHhcCCCCCCeEEEEeCCCCCeeecCCCCCC
Q 022560 207 LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ---KEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRD 283 (295)
Q Consensus 207 vV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~---~~l~~~~~~V~~~Pti~~~~~g~~~~~~~~gg~~~ 283 (295)
++.|+++||++|+.+.+.+.+. ++.|..+|++.+. .++. +.+++.++|+++ .+|+ .+ + .
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~-------~i~~~~~~i~~~~~~~~~~~-~~~~~~~vP~l~--~~g~--~i---~---g 64 (82)
T 1fov_A 3 VEIYTKETCPYCHRAKALLSSK-------GVSFQELPIDGNAAKREEMI-KRSGRTTVPQIF--IDAQ--HI---G---G 64 (82)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH-------TCCCEEEECTTCSHHHHHHH-HHHSSCCSCEEE--ETTE--EE---E---S
T ss_pred EEEEECCCChhHHHHHHHHHHC-------CCCcEEEECCCCHHHHHHHH-HHhCCCCcCEEE--ECCE--EE---e---C
Confidence 6779999999999999988764 3667778887641 2355 678999999984 3554 22 2 2
Q ss_pred HHHHHHHHHH
Q 022560 284 VDSLMAFVDA 293 (295)
Q Consensus 284 ~e~l~~fi~~ 293 (295)
.++|.+++++
T Consensus 65 ~~~i~~~~~~ 74 (82)
T 1fov_A 65 YDDLYALDAR 74 (82)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHC
Confidence 3566666653
No 273
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=97.89 E-value=2.4e-05 Score=56.86 Aligned_cols=55 Identities=18% Similarity=0.403 Sum_probs=42.1
Q ss_pred EEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcH----HHHHHhcCCCCCCeEEEEeCCC
Q 022560 206 WLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQK----EYAKQKLQLGSFPTILFFPKHS 271 (295)
Q Consensus 206 vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~----~l~~~~~~V~~~Pti~~~~~g~ 271 (295)
.++.|+++||++|+.+.+.+++. ++.|..+|++++ . ++. +.+++.++|++ |.+|+
T Consensus 7 ~v~ly~~~~C~~C~~~~~~L~~~-------~i~~~~~di~~~-~~~~~~l~-~~~~~~~vP~l--~~~g~ 65 (92)
T 2khp_A 7 DVIIYTRPGCPYCARAKALLARK-------GAEFNEIDASAT-PELRAEMQ-ERSGRNTFPQI--FIGSV 65 (92)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHT-------TCCCEEEESTTS-HHHHHHHH-HHHTSSCCCEE--EETTE
T ss_pred cEEEEECCCChhHHHHHHHHHHc-------CCCcEEEECCCC-HHHHHHHH-HHhCCCCcCEE--EECCE
Confidence 47789999999999999888763 377788888876 3 344 57899999975 44654
No 274
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=97.89 E-value=9.5e-05 Score=68.21 Aligned_cols=104 Identities=13% Similarity=0.046 Sum_probs=80.0
Q ss_pred CCceecCcccHHHHHhhcCCCCcEEEEEECCCC-hhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCC--
Q 022560 183 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWC-QFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLG-- 259 (295)
Q Consensus 183 ~~v~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC-~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~-- 259 (295)
+.|.+++.+++.++.. .+.+++|.|+.++| ..++.+...+.+++..+++ .+.|+.+|+++. ..++ +.|++.
T Consensus 219 p~v~elt~~~~~~~~~---~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~-~i~f~~id~~~~-~~~~-~~~gl~~~ 292 (382)
T 2r2j_A 219 PLVREITFENGEELTE---EGLPFLILFHMKEDTESLEIFQNEVARQLISEKG-TINFLHADCDKF-RHPL-LHIQKTPA 292 (382)
T ss_dssp CSSEECCHHHHHHHHT---TCCCEEEEEECTTCCHHHHHHHHHHHHHTGGGTT-TSEEEEEETTTT-HHHH-HHTTCCGG
T ss_pred CceEecChhhHHHHhc---CCCcEEEEEecCCchHHHHHHHHHHHHHHHHhCC-eeEEEEEchHHh-HHHH-HHcCCCcc
Confidence 5678899999888765 68899999999998 4456666667776667766 799999999988 7888 899997
Q ss_pred CCCeEEEEeCCCCCeeecCC--CCCCHHHHHHHHHHh
Q 022560 260 SFPTILFFPKHSSKPIKYPS--ERRDVDSLMAFVDAL 294 (295)
Q Consensus 260 ~~Pti~~~~~g~~~~~~~~g--g~~~~e~l~~fi~~l 294 (295)
.+|.++++..++ ...+.. +..+.++|.+||+.+
T Consensus 293 ~~P~i~i~~~~~--~y~~~~~~~~~~~~~i~~F~~d~ 327 (382)
T 2r2j_A 293 DCPVIAIDSFRH--MYVFGDFKDVLIPGKLKQFVFDL 327 (382)
T ss_dssp GCSEEEEECSSC--EEECCCSGGGGSTTHHHHHHHHH
T ss_pred CCCEEEEEcchh--cCCCCccccccCHHHHHHHHHHH
Confidence 789999987544 333332 134678999999865
No 275
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=97.89 E-value=1.6e-05 Score=60.33 Aligned_cols=55 Identities=18% Similarity=0.405 Sum_probs=39.8
Q ss_pred EEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCC---cHH----HHHHhcCCCCCCeEEEEeCCC
Q 022560 207 LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD---QKE----YAKQKLQLGSFPTILFFPKHS 271 (295)
Q Consensus 207 vV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~---~~~----l~~~~~~V~~~Pti~~~~~g~ 271 (295)
|+.|+++||++|+.+.+.|.++ ++.+..+|++.. ..+ +. +..++.++|++ |.+|+
T Consensus 21 v~vy~~~~Cp~C~~~~~~L~~~-------~i~~~~~di~~~~~~~~~~~~~l~-~~~g~~tvP~i--fi~g~ 82 (113)
T 3rhb_A 21 VVIYSKTWCSYCTEVKTLFKRL-------GVQPLVVELDQLGPQGPQLQKVLE-RLTGQHTVPNV--FVCGK 82 (113)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-------TCCCEEEEGGGSTTHHHHHHHHHH-HHHSCCSSCEE--EETTE
T ss_pred EEEEECCCChhHHHHHHHHHHc-------CCCCeEEEeecCCCChHHHHHHHH-HHhCCCCcCEE--EECCE
Confidence 6679999999999999998764 355566777652 122 44 55699999998 44665
No 276
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=97.88 E-value=4.2e-05 Score=65.26 Aligned_cols=92 Identities=13% Similarity=0.207 Sum_probs=71.7
Q ss_pred CCCcEEEEEE-CCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCC---------------------------cHHHHH
Q 022560 202 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD---------------------------QKEYAK 253 (295)
Q Consensus 202 ~~k~vvV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~---------------------------~~~l~~ 253 (295)
.+|.||++|| ++||+.|....+.|.+...+|+..++.++.|.+|.. +.+++
T Consensus 51 ~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~~g~~vigiS~Ds~~sh~aw~~~~~~~~~~~~l~fpllsD~~~~va- 129 (216)
T 3sbc_A 51 KGKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQGAQVLFASTDSEYSLLAWTNIPRKEGGLGPINIPLLADTNHSLS- 129 (216)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHHH-
T ss_pred CCCeEEEEEEcCCCCCcCchhhhHHHHhHHhhccCCceEEEeecCchhhHHHHHHHHHHhCCccCcccceEeCCCCHHH-
Confidence 4789999999 999999999999999999999877899999987642 14677
Q ss_pred HhcCCC------CCCeEEEEeCCCCCe----eecCCCCCCHHHHHHHHHHhC
Q 022560 254 QKLQLG------SFPTILFFPKHSSKP----IKYPSERRDVDSLMAFVDALR 295 (295)
Q Consensus 254 ~~~~V~------~~Pti~~~~~g~~~~----~~~~gg~~~~e~l~~fi~~l~ 295 (295)
+.|+|- .++.+++++..+.+. ..... .++.+++...|+.||
T Consensus 130 k~YGv~~~~~g~~~R~tFiID~~G~Ir~~~v~~~~~-grn~dEiLr~l~AlQ 180 (216)
T 3sbc_A 130 RDYGVLIEEEGVALRGLFIIDPKGVIRHITINDLPV-GRNVDEALRLVEAFQ 180 (216)
T ss_dssp HHHTCEETTTTEECEEEEEECTTSBEEEEEEECTTB-CCCHHHHHHHHHHHH
T ss_pred HHcCCeeccCCceeeEEEEECCCCeEEEEEEcCCCC-CCCHHHHHHHHHHhh
Confidence 788873 467888887766421 11222 489999999998875
No 277
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=97.79 E-value=8.7e-05 Score=53.16 Aligned_cols=74 Identities=12% Similarity=0.133 Sum_probs=48.5
Q ss_pred cEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCc---HHHHHHhcCC-----CCCCeEEEEeCCCCCeee
Q 022560 205 PWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ---KEYAKQKLQL-----GSFPTILFFPKHSSKPIK 276 (295)
Q Consensus 205 ~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~---~~l~~~~~~V-----~~~Pti~~~~~g~~~~~~ 276 (295)
..++.|+++||++|+.+...|.++. - .+.+..||.+... .++. +.++. .++|++++ +|+ .+
T Consensus 4 m~v~ly~~~~Cp~C~~~~~~L~~~~----i-~~~~~~vd~~~~~~~~~el~-~~~g~~~~~~~~vP~i~i--~g~--~i- 72 (89)
T 3msz_A 4 MKVKIYTRNGCPYCVWAKQWFEENN----I-AFDETIIDDYAQRSKFYDEM-NQSGKVIFPISTVPQIFI--DDE--HI- 72 (89)
T ss_dssp CCEEEEECTTCHHHHHHHHHHHHTT----C-CCEEEECCSHHHHHHHHHHH-HTTTCCSSCCCSSCEEEE--TTE--EE-
T ss_pred eEEEEEEcCCChhHHHHHHHHHHcC----C-CceEEEeecCCChhHHHHHH-HHhCCCCCCCCccCEEEE--CCE--EE-
Confidence 4578899999999999988886642 1 3555555554431 3466 67777 99999954 554 22
Q ss_pred cCCCCCCHHHHHHHHHHh
Q 022560 277 YPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 277 ~~gg~~~~e~l~~fi~~l 294 (295)
| ..++|.++++++
T Consensus 73 --~---g~~~i~~~~~~~ 85 (89)
T 3msz_A 73 --G---GFTELKANADKI 85 (89)
T ss_dssp --E---SHHHHHHTHHHH
T ss_pred --e---ChHHHHHHHHHH
Confidence 2 346666666543
No 278
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=97.73 E-value=9e-05 Score=63.55 Aligned_cols=87 Identities=10% Similarity=0.113 Sum_probs=62.5
Q ss_pred CCCcEEEEEECCC-ChhHH-----HHHHHHHHHHHHhcCCCeEEEEEEcCCC----------------------cHHHHH
Q 022560 202 RQEPWLVVLYAPW-CQFCQ-----AMEGSYVELADKLAGNGVKVGKFRADGD----------------------QKEYAK 253 (295)
Q Consensus 202 ~~k~vvV~Fya~w-C~~C~-----~~~p~~~~la~~~~~~~v~~~~vd~~~~----------------------~~~l~~ 253 (295)
.++++||+||+.| |++|. ...+.|.++ +. ++.++.|+.|.. +..++
T Consensus 47 ~Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~~--gv~VvgIS~Ds~~~~~~f~~~~gl~~fplLsD~~~~~va- 120 (224)
T 3keb_A 47 SHTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS---WP--HLKLIVITVDSPSSLARARHEHGLPNIALLSTLRGRDFH- 120 (224)
T ss_dssp TTCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT---CT--TSEEEEEESSCHHHHHHHHHHHCCTTCEEEESTTCTTHH-
T ss_pred CCCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH---cC--CCEEEEEECCCHHHHHHHHHHcCCCCceEEEcCCchHHH-
Confidence 4789999999988 99999 777777776 53 588888876531 14677
Q ss_pred HhcCCCC---------CCeEEEEeCCCCCeeecC----CCCCCHHHHHHHHHHh
Q 022560 254 QKLQLGS---------FPTILFFPKHSSKPIKYP----SERRDVDSLMAFVDAL 294 (295)
Q Consensus 254 ~~~~V~~---------~Pti~~~~~g~~~~~~~~----gg~~~~e~l~~fi~~l 294 (295)
+.|+|.. .|++++++..+.+..... .+..+.+++.+.|+++
T Consensus 121 k~yGv~~~~~~~~G~~~p~tfvID~dG~I~~~~~~~~~~~~pd~~evl~~L~~l 174 (224)
T 3keb_A 121 KRYGVLITEYPLSGYTSPAIILADAANVVHYSERLANTRDFFDFDAIEKLLQEG 174 (224)
T ss_dssp HHTTCBCCSTTSTTCBCCEEEEECTTCBEEEEEECSBTTCCCCHHHHHHHHHHH
T ss_pred HHhCCccccccccCCccCEEEEEcCCCEEEEEEecCCCCCCCCHHHHHHHHHHh
Confidence 7888864 799999986554332211 1246789999888765
No 279
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=97.66 E-value=5.5e-05 Score=63.13 Aligned_cols=43 Identities=9% Similarity=0.205 Sum_probs=38.9
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcC
Q 022560 202 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD 245 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~ 245 (295)
.++++||.|++.||++|+.+.|.+.++.+.+.+ ++.|..+++.
T Consensus 23 ~~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~-~v~~~~~p~~ 65 (193)
T 3hz8_A 23 AGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKD-DMYLRTEHVV 65 (193)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHTTCCT-TEEEEEEECC
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHCCC-CeEEEEecCC
Confidence 468899999999999999999999999999887 7999888864
No 280
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=97.62 E-value=0.00016 Score=54.59 Aligned_cols=66 Identities=15% Similarity=0.330 Sum_probs=47.1
Q ss_pred cccHHHHHhhcCCCCcEEEEEEC-----CCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHH----HHHHhcCCCC
Q 022560 190 RTGMENLARLDHRQEPWLVVLYA-----PWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKE----YAKQKLQLGS 260 (295)
Q Consensus 190 ~~~f~~~i~~~~~~k~vvV~Fya-----~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~----l~~~~~~V~~ 260 (295)
.+.+++++. .+ .|+ .|+. +||++|+.++..|.++ ++.|..+|++++ .. +. +..+..+
T Consensus 5 ~~~~~~~i~---~~-~vv-vy~~g~~~~~~Cp~C~~ak~~L~~~-------~i~~~~vdi~~~-~~~~~~l~-~~~g~~~ 70 (109)
T 1wik_A 5 SSGLKVLTN---KA-SVM-LFMKGNKQEAKCGFSKQILEILNST-------GVEYETFDILED-EEVRQGLK-TFSNWPT 70 (109)
T ss_dssp CCCHHHHHT---TS-SEE-EEESSTTTCCCSSTHHHHHHHHHHT-------CSCEEEEESSSC-HHHHHHHH-HHHSCCS
T ss_pred HHHHHHHhc---cC-CEE-EEEecCCCCCCCchHHHHHHHHHHc-------CCCeEEEECCCC-HHHHHHHH-HHhCCCC
Confidence 355677764 33 444 4666 9999999999888764 478899999887 44 33 4568889
Q ss_pred CCeEEEEeCCC
Q 022560 261 FPTILFFPKHS 271 (295)
Q Consensus 261 ~Pti~~~~~g~ 271 (295)
+|++ |.+|+
T Consensus 71 vP~i--fi~g~ 79 (109)
T 1wik_A 71 YPQL--YVRGD 79 (109)
T ss_dssp SCEE--ECSSS
T ss_pred CCEE--EECCE
Confidence 9985 55665
No 281
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=97.62 E-value=0.00039 Score=60.29 Aligned_cols=103 Identities=10% Similarity=0.097 Sum_probs=76.4
Q ss_pred CCceecCcccHHHHHhhcCCCCcEEEEEECCCChh----HHHHHHHHHHHHHHhcC--CCeEEEEEEcCCCcHHHHHHhc
Q 022560 183 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQF----CQAMEGSYVELADKLAG--NGVKVGKFRADGDQKEYAKQKL 256 (295)
Q Consensus 183 ~~v~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~----C~~~~p~~~~la~~~~~--~~v~~~~vd~~~~~~~l~~~~~ 256 (295)
+.|.++|.+++..+. +.+++|.|+..-+.. ...+...+.++|+.+++ ..+.|+.+|.++. ..+. +.|
T Consensus 114 Plv~e~t~~n~~~~~-----~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~k~~~~~F~~~d~~~~-~~~~-~~f 186 (252)
T 2h8l_A 114 GICPHMTEDNKDLIQ-----GKDLLIAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAGHKLNFAVASRKTF-SHEL-SDF 186 (252)
T ss_dssp CSSCEECTTTHHHHS-----SSSEEEEEECCBTTTBHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEETTTT-HHHH-GGG
T ss_pred CCeeecccccHhhhc-----CCCeEEEEeecchhhcchhHHHHHHHHHHHHHHccccCceEEEEEEchHHH-HHHH-HHc
Confidence 568899999988853 356677777543321 22477888889999987 2399999999988 7788 899
Q ss_pred CC----CCCCeEEEEeCCCCCeeecCCCCCCHHH--HHHHHHHh
Q 022560 257 QL----GSFPTILFFPKHSSKPIKYPSERRDVDS--LMAFVDAL 294 (295)
Q Consensus 257 ~V----~~~Pti~~~~~g~~~~~~~~gg~~~~e~--l~~fi~~l 294 (295)
++ ..+|.+++++..+. .+.+.+ ..+.+. |.+|++.+
T Consensus 187 gl~~~~~~~P~v~i~~~~~~-ky~~~~-~~t~~~~~i~~F~~~~ 228 (252)
T 2h8l_A 187 GLESTAGEIPVVAIRTAKGE-KFVMQE-EFSRDGKALERFLQDY 228 (252)
T ss_dssp TCCCCSCSSCEEEEECTTSC-EEECCS-CCCTTSHHHHHHHHHH
T ss_pred CCCCccCCCCEEEEEeCcCc-EecCCc-ccCcchHHHHHHHHHH
Confidence 99 36999999965332 455655 677788 99999875
No 282
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=97.60 E-value=0.00035 Score=59.64 Aligned_cols=93 Identities=11% Similarity=0.219 Sum_probs=69.4
Q ss_pred CCCcEEEEEE-CCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCC---------------------------cHHHHH
Q 022560 202 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD---------------------------QKEYAK 253 (295)
Q Consensus 202 ~~k~vvV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~---------------------------~~~l~~ 253 (295)
.+|.|||+|| ++||+.|......|.++..+|+..++.++.|.+|.. +.+++
T Consensus 55 ~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~~~g~~vigiS~Ds~~sh~~w~~~~~~~~~~~~l~fpllsD~~~~va- 133 (219)
T 3tue_A 55 KGKWVVLFFYPLDFTFVCPTEVIAFSDSVSRFNELNCEVLACSIDSEYAHLQWTLQDRKKGGLGTMAIPILADKTKNIA- 133 (219)
T ss_dssp TTSEEEEEECSCTTCSSCCHHHHHHHTTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTSHHH-
T ss_pred CCCEEEEEEecccCCCCCchhHhhHHHHHhhhccCCcEEEEeeCCchhhHHHHhhhhHHhcCccccccccccCcccHHH-
Confidence 4788999999 999999999999999999999887899999987652 14677
Q ss_pred HhcCCC----C--CCeEEEEeCCCCCee-e-cC-CCCCCHHHHHHHHHHhC
Q 022560 254 QKLQLG----S--FPTILFFPKHSSKPI-K-YP-SERRDVDSLMAFVDALR 295 (295)
Q Consensus 254 ~~~~V~----~--~Pti~~~~~g~~~~~-~-~~-gg~~~~e~l~~fi~~l~ 295 (295)
+.|+|- + +-.+++++..+.+.. . +. .-.++.+++.+.|+.||
T Consensus 134 ~~yGv~~~~~g~~~R~tFiIDp~g~Ir~~~~~~~~~gr~~~EvLr~l~aLQ 184 (219)
T 3tue_A 134 RSYGVLEESQGVAYRGLFIIDPHGMLRQITVNDMPVGRSVEEVLRLLEAFQ 184 (219)
T ss_dssp HHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred HHcCCcccCCCeeEEEEEEECCCCeEEEEEEecCCCCCCHHHHHHHHHHhh
Confidence 788873 2 235667766553211 1 11 12479999999998875
No 283
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=97.55 E-value=8.1e-05 Score=58.18 Aligned_cols=69 Identities=16% Similarity=0.295 Sum_probs=45.8
Q ss_pred ccHHHHHhhcCCCCcEEEEEECCCChhHHHH-HHHHHHHHHHhcCCCeEEEEEEcCCCc------HHHHHHhcCCCCCCe
Q 022560 191 TGMENLARLDHRQEPWLVVLYAPWCQFCQAM-EGSYVELADKLAGNGVKVGKFRADGDQ------KEYAKQKLQLGSFPT 263 (295)
Q Consensus 191 ~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~-~p~~~~la~~~~~~~v~~~~vd~~~~~------~~l~~~~~~V~~~Pt 263 (295)
+.+++++. ..+ |+.|+++||++|+.+ ++.|.++... .+.+..+|++... ..+. +.+++.++|+
T Consensus 28 ~~v~~~i~---~~~--Vvvy~~~~Cp~C~~a~k~~L~~~~~~----~i~~~~vdvd~~~~~~~~~~~L~-~~~g~~tVP~ 97 (129)
T 3ctg_A 28 AHVKDLIG---QKE--VFVAAKTYCPYCKATLSTLFQELNVP----KSKALVLELDEMSNGSEIQDALE-EISGQKTVPN 97 (129)
T ss_dssp HHHHHHHH---HSS--EEEEECTTCHHHHHHHHHHHTTSCCC----GGGEEEEEGGGSTTHHHHHHHHH-HHHSCCSSCE
T ss_pred HHHHHHHc---CCC--EEEEECCCCCchHHHHHHHHHhcCcc----CCCcEEEEccccCCHHHHHHHHH-HHhCCCCCCE
Confidence 45556554 333 678999999999998 7777654311 1555566665431 3566 7889999999
Q ss_pred EEEEeCCC
Q 022560 264 ILFFPKHS 271 (295)
Q Consensus 264 i~~~~~g~ 271 (295)
+ |.+|+
T Consensus 98 v--fi~g~ 103 (129)
T 3ctg_A 98 V--YINGK 103 (129)
T ss_dssp E--EETTE
T ss_pred E--EECCE
Confidence 6 45665
No 284
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=97.53 E-value=0.00012 Score=55.69 Aligned_cols=66 Identities=15% Similarity=0.324 Sum_probs=45.1
Q ss_pred ccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCC--c----HHHHHHhcCCCCCCeE
Q 022560 191 TGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD--Q----KEYAKQKLQLGSFPTI 264 (295)
Q Consensus 191 ~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~--~----~~l~~~~~~V~~~Pti 264 (295)
+.+++++. +++ |+.|+++|||+|+.+++.|.++ ++.+-.+|++.. . ..+. +..+..++|++
T Consensus 8 ~~~~~~i~---~~~--v~vy~~~~Cp~C~~ak~~L~~~-------~i~~~~~dvd~~~~~~~~~~~l~-~~~g~~tvP~v 74 (114)
T 3h8q_A 8 RHLVGLIE---RSR--VVIFSKSYCPHSTRVKELFSSL-------GVECNVLELDQVDDGARVQEVLS-EITNQKTVPNI 74 (114)
T ss_dssp HHHHHHHH---HCS--EEEEECTTCHHHHHHHHHHHHT-------TCCCEEEETTTSTTHHHHHHHHH-HHHSCCSSCEE
T ss_pred HHHHHHhc---cCC--EEEEEcCCCCcHHHHHHHHHHc-------CCCcEEEEecCCCChHHHHHHHH-HHhCCCccCEE
Confidence 45566654 333 4449999999999999988774 356677777742 1 1244 56788999998
Q ss_pred EEEeCCC
Q 022560 265 LFFPKHS 271 (295)
Q Consensus 265 ~~~~~g~ 271 (295)
++ +|+
T Consensus 75 fi--~g~ 79 (114)
T 3h8q_A 75 FV--NKV 79 (114)
T ss_dssp EE--TTE
T ss_pred EE--CCE
Confidence 65 554
No 285
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=97.46 E-value=0.0017 Score=56.16 Aligned_cols=103 Identities=17% Similarity=0.166 Sum_probs=76.4
Q ss_pred CCceecCcccHHHHHhhcCCCCcEEEEEECC-CC---h-hHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcC
Q 022560 183 QNLVTLNRTGMENLARLDHRQEPWLVVLYAP-WC---Q-FCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQ 257 (295)
Q Consensus 183 ~~v~~lt~~~f~~~i~~~~~~k~vvV~Fya~-wC---~-~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~ 257 (295)
+.|.++|.+++..+. .++++++.|+.. .. . ....+...+.++|+.++ ++.|+.+|.++. .... +.|+
T Consensus 116 Plv~e~t~~n~~~~~----~~~~l~~~~~~~d~~~~~~~~~~~~~~~~~~vAk~~k--ki~F~~~d~~~~-~~~l-~~fg 187 (250)
T 3ec3_A 116 PLVGHRKTSNDAKRY----SKRPLVVVYYSVDFSFDYRTATQFWRNKVLEVAKDFP--EYTFAIADEEDY-ATEV-KDLG 187 (250)
T ss_dssp CTEEEECTTTHHHHS----CSSSEEEEEECCCCSTTTHHHHHHHHHHHHHHHTTCT--TSEEEEEETTTT-HHHH-HHTT
T ss_pred CceeecCccchhhhh----ccCccEEEEEecccccccchhHHHHHHHHHHHHHhhc--ceeEEEEcHHHH-HHHH-HHcC
Confidence 568889999987765 367777777753 32 3 34557889999999998 599999999988 6777 8899
Q ss_pred CCC--C-CeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 258 LGS--F-PTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 258 V~~--~-Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
+.. + |.+++++..+ ..+.+..+..+.++|.+|++.+
T Consensus 188 l~~~~~~p~~~~~~~~~-~ky~~~~~~~t~~~i~~Fv~~~ 226 (250)
T 3ec3_A 188 LSESGGDVNAAILDESG-KKFAMEPEEFDSDALREFVMAF 226 (250)
T ss_dssp CSSCSCSCEEEEECTTS-CEEECCCCSCCHHHHHHHHHHH
T ss_pred CCccCCCcEEEEEcCCC-ceecCCcccCCHHHHHHHHHHH
Confidence 863 4 4777775433 2555553468999999999875
No 286
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=97.40 E-value=7.7e-05 Score=62.03 Aligned_cols=42 Identities=19% Similarity=0.456 Sum_probs=35.9
Q ss_pred CCcEEEEEECCCChhHHHHHHHH---HHHHHHhcCCCeEEEEEEcC
Q 022560 203 QEPWLVVLYAPWCQFCQAMEGSY---VELADKLAGNGVKVGKFRAD 245 (295)
Q Consensus 203 ~k~vvV~Fya~wC~~C~~~~p~~---~~la~~~~~~~v~~~~vd~~ 245 (295)
.+++||.|++.|||+|+.+.|.+ .++.+.+.+ ++.|..+++.
T Consensus 14 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~ 58 (189)
T 3l9v_A 14 DAPAVVEFFSFYCPPCYAFSQTMGVDQAIRHVLPQ-GSRMVKYHVS 58 (189)
T ss_dssp TCCSEEEEECTTCHHHHHHHHTSCHHHHHHTTCCT-TCCEEEEECS
T ss_pred CCCEEEEEECCCChhHHHHhHhccchHHHHHhCCC-CCEEEEEech
Confidence 47899999999999999999987 678888876 6888888765
No 287
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=97.35 E-value=0.00033 Score=63.34 Aligned_cols=88 Identities=6% Similarity=0.040 Sum_probs=62.5
Q ss_pred CCCcEEEEEE-CCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCC--------------------cHHHHHHhcCC--
Q 022560 202 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD--------------------QKEYAKQKLQL-- 258 (295)
Q Consensus 202 ~~k~vvV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~--------------------~~~l~~~~~~V-- 258 (295)
.+|.|||+|| +.||+.|....+.|.+. .+ .++.++.|+.|.. +..++ +.|+|
T Consensus 23 ~Gk~vvl~F~p~~~tp~C~~e~~~~~~~--~~--~~~~v~gis~D~~~~~~~f~~~~~l~fp~l~D~~~~v~-~~ygv~~ 97 (322)
T 4eo3_A 23 YGKYTILFFFPKAGTSGSTREAVEFSRE--NF--EKAQVVGISRDSVEALKRFKEKNDLKVTLLSDPEGILH-EFFNVLE 97 (322)
T ss_dssp TTSEEEEEECSSTTSHHHHHHHHHHHHS--CC--TTEEEEEEESCCHHHHHHHHHHHTCCSEEEECTTCHHH-HHTTCEE
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHH--hh--CCCEEEEEeCCCHHHHHHHHHhhCCceEEEEcCchHHH-HhcCCCC
Confidence 5789999999 68999999887777541 12 3588888887642 14677 88998
Q ss_pred --CCCCeEEEEeCCCCCeeecCC--CCCCHHHHHHHHHHh
Q 022560 259 --GSFPTILFFPKHSSKPIKYPS--ERRDVDSLMAFVDAL 294 (295)
Q Consensus 259 --~~~Pti~~~~~g~~~~~~~~g--g~~~~e~l~~fi~~l 294 (295)
..+|+.++++..+.+...+.+ .....+++.+.|+++
T Consensus 98 ~~~~~r~tfiId~~G~i~~~~~~v~~~~h~~~~l~~~~~~ 137 (322)
T 4eo3_A 98 NGKTVRSTFLIDRWGFVRKEWRRVKVEGHVQEVKEALDRL 137 (322)
T ss_dssp TTEECCEEEEECTTSBEEEEEESCCSTTHHHHHHHHHHHH
T ss_pred CCcCccEEEEECCCCEEEEEEeCCCccccHHHHHHHHhhh
Confidence 357899999876654333333 134678888888876
No 288
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=97.24 E-value=0.00079 Score=55.47 Aligned_cols=51 Identities=18% Similarity=0.280 Sum_probs=39.7
Q ss_pred cHHHHHhhcCCCC-cEEEEEECCCChhHHH-HHHHHHHHHHHhcCCCe-EEEEEEcCC
Q 022560 192 GMENLARLDHRQE-PWLVVLYAPWCQFCQA-MEGSYVELADKLAGNGV-KVGKFRADG 246 (295)
Q Consensus 192 ~f~~~i~~~~~~k-~vvV~Fya~wC~~C~~-~~p~~~~la~~~~~~~v-~~~~vd~~~ 246 (295)
++.+++ +++ .||+.|++.||+.|.. ..+.|.+.+++|+..++ .++.|..+.
T Consensus 40 sLsd~~----~Gk~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~~g~d~VigIS~D~ 93 (176)
T 4f82_A 40 SVRDQV----AGKRVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRAAGIDEIWCVSVND 93 (176)
T ss_dssp EHHHHH----TTCEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSC
T ss_pred eHHHHh----CCCeEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 455554 355 5566677999999999 99999999999987678 888887764
No 289
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=97.05 E-value=0.00038 Score=57.61 Aligned_cols=39 Identities=21% Similarity=0.403 Sum_probs=33.9
Q ss_pred CCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEc
Q 022560 203 QEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRA 244 (295)
Q Consensus 203 ~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~ 244 (295)
++++||.|++.||++|+.+.|.+.++.+.+ + +.|..+.+
T Consensus 22 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~-~--v~~~~~p~ 60 (185)
T 3feu_A 22 GMAPVTEVFALSCGHCRNMENFLPVISQEA-G--TDIGKMHI 60 (185)
T ss_dssp CCCSEEEEECTTCHHHHHHGGGHHHHHHHH-T--SCCEEEEC
T ss_pred CCCEEEEEECCCChhHHHhhHHHHHHHHHh-C--CeEEEEec
Confidence 678999999999999999999999999998 5 66666654
No 290
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=96.98 E-value=0.0028 Score=56.44 Aligned_cols=103 Identities=11% Similarity=0.123 Sum_probs=72.0
Q ss_pred CCCCceecC-cccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHH-HHhc--
Q 022560 181 NSQNLVTLN-RTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYA-KQKL-- 256 (295)
Q Consensus 181 ~~~~v~~lt-~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~-~~~~-- 256 (295)
....+..++ .+++++++. ..+++++|.|.. - ....+.|.++|..+.+ .+.|+.++-.+. ..+. -++|
T Consensus 141 ~~~~v~~i~~~~~l~~~l~--~~~~~~vi~fs~-~----~~~~~~f~~~A~~~~~-~~~F~~v~~~~~-a~~~~~~~~~~ 211 (298)
T 3ed3_A 141 IRSYVKKFVRIDTLGSLLR--KSPKLSVVLFSK-Q----DKISPVYKSIALDWLG-KFDFYSISNKKL-KQLTDMNPTYE 211 (298)
T ss_dssp CCCCEEECSCGGGHHHHHT--SCSSEEEEEEES-S----SSCCHHHHHHHHHTBT-TEEEEEEEGGGC-CCCCTTCTTST
T ss_pred cccccEEcCCHHHHHHHHh--cCCceEEEEEcC-C----CcchHHHHHHHHHhhc-CcEEEEEcchHh-hhhhhhhhhcc
Confidence 345677774 477888875 224666776633 2 2345789999999988 899999986543 1000 0011
Q ss_pred ----------------CCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHH
Q 022560 257 ----------------QLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVD 292 (295)
Q Consensus 257 ----------------~V~~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~ 292 (295)
.....|++++|+.....++.|.|+..+.++|.+||.
T Consensus 212 ~~p~i~~~~~~~~~~~~~~~~P~lv~~~~~~~~~~~y~g~~~~~~~i~~fi~ 263 (298)
T 3ed3_A 212 KTPEIFKYLQKVIPEQRQSDKSKLVVFDADKDKFWEYEGNSINKNDISKFLR 263 (298)
T ss_dssp TCHHHHHHHHHHHHHHTTCSSCEEEEEETTTTEEEECCCSSCCHHHHHHHHH
T ss_pred cCcchhhhhhcccccccccCCCeEEEEcCCCCceEEeccccCCHHHHHHHHH
Confidence 226799999998766668999976789999999997
No 291
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=96.98 E-value=0.00075 Score=52.54 Aligned_cols=69 Identities=10% Similarity=0.105 Sum_probs=43.1
Q ss_pred ccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCC--Cc---HH-HHHHhcCCCCCCeE
Q 022560 191 TGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG--DQ---KE-YAKQKLQLGSFPTI 264 (295)
Q Consensus 191 ~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~--~~---~~-l~~~~~~V~~~Pti 264 (295)
++|++++. ..+ |+.|..+||++|+..+..|.+. +.- ++.+..+|++. +. .+ +. +..+..++|++
T Consensus 5 ~~~~~ii~---~~~--Vvvysk~~Cp~C~~ak~lL~~~---~~~-~v~~~~idid~~~d~~~~~~~l~-~~~G~~tVP~I 74 (127)
T 3l4n_A 5 KEYSLILD---LSP--IIIFSKSTCSYSKGMKELLENE---YQF-IPNYYIIELDKHGHGEELQEYIK-LVTGRGTVPNL 74 (127)
T ss_dssp HHHHHHHT---SCS--EEEEECTTCHHHHHHHHHHHHH---EEE-ESCCEEEEGGGSTTHHHHHHHHH-HHHSCCSSCEE
T ss_pred HHHHHHHc---cCC--EEEEEcCCCccHHHHHHHHHHh---ccc-CCCcEEEEecCCCCHHHHHHHHH-HHcCCCCcceE
Confidence 46777764 333 7789999999999999888763 111 13344455543 21 12 32 34588899998
Q ss_pred EEEeCCC
Q 022560 265 LFFPKHS 271 (295)
Q Consensus 265 ~~~~~g~ 271 (295)
++ +|+
T Consensus 75 fI--~G~ 79 (127)
T 3l4n_A 75 LV--NGV 79 (127)
T ss_dssp EE--TTE
T ss_pred EE--CCE
Confidence 54 554
No 292
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=96.93 E-value=0.0056 Score=51.20 Aligned_cols=43 Identities=12% Similarity=0.169 Sum_probs=33.7
Q ss_pred CCCcEEEEEECCCChhHHHHHHHH-HHHHHHhcC-CCeEEEEEEc
Q 022560 202 RQEPWLVVLYAPWCQFCQAMEGSY-VELADKLAG-NGVKVGKFRA 244 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~C~~~~p~~-~~la~~~~~-~~v~~~~vd~ 244 (295)
..+.+||.|+...||+|+.+.+.+ ..+.+.|.+ .+|.|...++
T Consensus 28 ~a~vtvvef~D~~CP~C~~~~~~~~~~l~~~~~~~g~v~~~~~~~ 72 (202)
T 3gha_A 28 DAPVTVVEFGDYKCPSCKVFNSDIFPKIQKDFIDKGDVKFSFVNV 72 (202)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHTHHHHHHHTTTTTSEEEEEEEC
T ss_pred CCCEEEEEEECCCChhHHHHHHHhhHHHHHHhccCCeEEEEEEec
Confidence 457889999999999999999887 567777743 3688877653
No 293
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=96.92 E-value=0.011 Score=50.39 Aligned_cols=42 Identities=7% Similarity=0.090 Sum_probs=32.5
Q ss_pred CCCcEEEEEECCCChhHHHHHHHH-HHHHHHhcC-CCeEEEEEE
Q 022560 202 RQEPWLVVLYAPWCQFCQAMEGSY-VELADKLAG-NGVKVGKFR 243 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~C~~~~p~~-~~la~~~~~-~~v~~~~vd 243 (295)
..+.+|+.|....||+|+.+.+.+ .++.+.|.+ .+|.|+..+
T Consensus 38 ~A~vtIvef~Dy~CP~C~~~~~~~~~~l~~~~~~~g~V~~v~~~ 81 (226)
T 3f4s_A 38 KAPILMIEYASLTCYHCSLFHRNVFPKIKEKYIDTGKMLYIFRH 81 (226)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHTHHHHHHHHTTTTSEEEEEEE
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHcccCCeEEEEEEe
Confidence 356789999999999999999965 778878842 367776654
No 294
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=96.82 E-value=0.00097 Score=52.47 Aligned_cols=67 Identities=12% Similarity=0.235 Sum_probs=44.2
Q ss_pred ccHHHHHhhcCCCCcEEEEEEC----CCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHH---HHhcCCCCCCe
Q 022560 191 TGMENLARLDHRQEPWLVVLYA----PWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYA---KQKLQLGSFPT 263 (295)
Q Consensus 191 ~~f~~~i~~~~~~k~vvV~Fya----~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~---~~~~~V~~~Pt 263 (295)
+.+++++. ...|+|+.++ +||++|+..+..|.++ ++.|..+|++.+ +++. +...+..++|.
T Consensus 26 ~~v~~~i~----~~~Vvvy~ks~~~~~~Cp~C~~ak~~L~~~-------gv~y~~vdI~~d-~~~~~~L~~~~G~~tvP~ 93 (135)
T 2wci_A 26 EKIQRQIA----ENPILLYMKGSPKLPSCGFSAQAVQALAAC-------GERFAYVDILQN-PDIRAELPKYANWPTFPQ 93 (135)
T ss_dssp HHHHHHHH----HCSEEEEESBCSSSBSSHHHHHHHHHHHTT-------CSCCEEEEGGGC-HHHHHHHHHHHTCCSSCE
T ss_pred HHHHHHhc----cCCEEEEEEecCCCCCCccHHHHHHHHHHc-------CCceEEEECCCC-HHHHHHHHHHHCCCCcCE
Confidence 34455443 3456665554 9999999998888653 477888898876 4433 03457788998
Q ss_pred EEEEeCCC
Q 022560 264 ILFFPKHS 271 (295)
Q Consensus 264 i~~~~~g~ 271 (295)
++ .+|+
T Consensus 94 Vf--I~G~ 99 (135)
T 2wci_A 94 LW--VDGE 99 (135)
T ss_dssp EE--ETTE
T ss_pred EE--ECCE
Confidence 64 4554
No 295
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=96.75 E-value=0.015 Score=49.73 Aligned_cols=96 Identities=15% Similarity=0.210 Sum_probs=65.8
Q ss_pred ecCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcC-CCeEEEEEEcCCCcHHHHHHhcCCCCCCeEE
Q 022560 187 TLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAG-NGVKVGKFRADGDQKEYAKQKLQLGSFPTIL 265 (295)
Q Consensus 187 ~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~-~~v~~~~vd~~~~~~~l~~~~~~V~~~Pti~ 265 (295)
.++.+++..++.. +..+.+.+.|...-|... .+++..+.. ..+.+..++ +.+ ..++ ++|+|+++|+++
T Consensus 142 ~~~~~~l~~~~~~-~~~~~~al~f~~~~~~~~-------~~~~~d~~~~~~i~v~~~~-~~~-~~l~-~~f~v~~~Pslv 210 (244)
T 3q6o_A 142 PAXLEEIDGFFAR-NNEEYLALIFEXGGSYLA-------REVALDLSQHKGVAVRRVL-NTE-ANVV-RKFGVTDFPSCY 210 (244)
T ss_dssp CCCHHHHHTHHHH-CCCSEEEEEEECTTCCHH-------HHHHHHTTTCTTEEEEEEE-TTC-HHHH-HHHTCCCSSEEE
T ss_pred cccHHHHHHHhhc-CCCceEEEEEEECCcchH-------HHHHHHhccCCceEEEEEe-Cch-HHHH-HHcCCCCCCeEE
Confidence 3456677776652 456778888888765433 333444443 357877776 344 7899 999999999999
Q ss_pred EEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 266 FFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 266 ~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
+|..+++ ...+.....+.+.+..+|+++
T Consensus 211 l~~~~g~-~~~~~~~~~~r~~~~~~l~~~ 238 (244)
T 3q6o_A 211 LLFRNGS-VSRVPVLMESRSFYTAYLQRL 238 (244)
T ss_dssp EEETTSC-EEECCCSSSSHHHHHHHHHTC
T ss_pred EEeCCCC-eEeeccccccHHHHHHHHHhC
Confidence 9986654 555555456778888888765
No 296
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=96.70 E-value=0.003 Score=47.47 Aligned_cols=60 Identities=15% Similarity=0.241 Sum_probs=39.3
Q ss_pred CCCcEEEEEEC----CCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHH---HHhcCCCCCCeEEEEeCCC
Q 022560 202 RQEPWLVVLYA----PWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYA---KQKLQLGSFPTILFFPKHS 271 (295)
Q Consensus 202 ~~k~vvV~Fya----~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~---~~~~~V~~~Pti~~~~~g~ 271 (295)
+...|+|+--. |||++|+..+..|.+. ++.|-.+|++++ .++. .+..+..++|.++ -+|+
T Consensus 16 ~~~~Vvvy~k~t~~~p~Cp~C~~ak~~L~~~-------gi~~~~~dI~~~-~~~~~~l~~~~g~~tvP~if--i~g~ 82 (109)
T 3ipz_A 16 NSEKVVLFMKGTRDFPMCGFSNTVVQILKNL-------NVPFEDVNILEN-EMLRQGLKEYSNWPTFPQLY--IGGE 82 (109)
T ss_dssp TSSSEEEEESBCSSSBSSHHHHHHHHHHHHT-------TCCCEEEEGGGC-HHHHHHHHHHHTCSSSCEEE--ETTE
T ss_pred ccCCEEEEEecCCCCCCChhHHHHHHHHHHc-------CCCcEEEECCCC-HHHHHHHHHHHCCCCCCeEE--ECCE
Confidence 34455553333 5999999999888764 477788888766 4332 0344788999763 3554
No 297
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=96.52 E-value=0.0057 Score=52.28 Aligned_cols=58 Identities=12% Similarity=0.245 Sum_probs=42.9
Q ss_pred CcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCc--HHHHHHhcCCCCCCeEEEEeCCC
Q 022560 204 EPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ--KEYAKQKLQLGSFPTILFFPKHS 271 (295)
Q Consensus 204 k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~--~~l~~~~~~V~~~Pti~~~~~g~ 271 (295)
...++.|..+||+.|+..+..|++. ++.+-.+|++.+. .++. +.++..++|++++ +|+
T Consensus 169 ~~~i~ly~~~~Cp~C~~a~~~L~~~-------~i~~~~~~i~~~~~~~~l~-~~~g~~~vP~~~~--~g~ 228 (241)
T 1nm3_A 169 QESISIFTKPGCPFCAKAKQLLHDK-------GLSFEEIILGHDATIVSVR-AVSGRTTVPQVFI--GGK 228 (241)
T ss_dssp CCCEEEEECSSCHHHHHHHHHHHHH-------TCCCEEEETTTTCCHHHHH-HHTCCSSSCEEEE--TTE
T ss_pred cceEEEEECCCChHHHHHHHHHHHc-------CCceEEEECCCchHHHHHH-HHhCCCCcCEEEE--CCE
Confidence 4567788999999999998888763 3566667776541 3466 7789999999853 554
No 298
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=96.51 E-value=0.0061 Score=43.50 Aligned_cols=56 Identities=18% Similarity=0.149 Sum_probs=39.5
Q ss_pred EEEEECC----CChhHHHHHHHHHHHHHHhcCCCeEEEEEEcC-----CCc---HHHHHHhcCCC-----CCCeEEEEeC
Q 022560 207 LVVLYAP----WCQFCQAMEGSYVELADKLAGNGVKVGKFRAD-----GDQ---KEYAKQKLQLG-----SFPTILFFPK 269 (295)
Q Consensus 207 vV~Fya~----wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~-----~~~---~~l~~~~~~V~-----~~Pti~~~~~ 269 (295)
|+.|+.+ ||++|+..+..|++. ++.+-.+|++ .+. .++. +..+.. ++|++++ .+
T Consensus 2 v~iY~~~~~~~~Cp~C~~ak~~L~~~-------gi~y~~idI~~~~~~~~~~~~~~l~-~~~g~~~~~~~tvP~v~i-~~ 72 (87)
T 1aba_A 2 FKVYGYDSNIHKCGPCDNAKRLLTVK-------KQPFEFINIMPEKGVFDDEKIAELL-TKLGRDTQIGLTMPQVFA-PD 72 (87)
T ss_dssp EEEEECCTTTSCCHHHHHHHHHHHHT-------TCCEEEEESCSBTTBCCHHHHHHHH-HHHTCSCCTTCCSCEEEC-TT
T ss_pred EEEEEeCCCCCcCccHHHHHHHHHHc-------CCCEEEEEeeccccccCHHHHHHHH-HHhCCCCCCCCccCEEEE-EC
Confidence 5678899 999999988887663 4677778887 441 2345 566777 8998764 34
Q ss_pred CC
Q 022560 270 HS 271 (295)
Q Consensus 270 g~ 271 (295)
|+
T Consensus 73 g~ 74 (87)
T 1aba_A 73 GS 74 (87)
T ss_dssp SC
T ss_pred CE
Confidence 54
No 299
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=96.41 E-value=0.031 Score=48.89 Aligned_cols=80 Identities=16% Similarity=0.201 Sum_probs=54.3
Q ss_pred CCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCC-----------------cHHHHHHhcCCCCC--Ce
Q 022560 203 QEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD-----------------QKEYAKQKLQLGSF--PT 263 (295)
Q Consensus 203 ~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~-----------------~~~l~~~~~~V~~~--Pt 263 (295)
....|..|.+++|++|...+..+.+++..+ ++....++++.. +..+. ++++.+++ |.
T Consensus 42 ~~~~VelyTs~gCp~C~~Ak~lL~~~~~~~---~vi~l~~~v~~~dylgw~D~~a~~~~~~r~~~~~-~~~G~~tVyTPq 117 (270)
T 2axo_A 42 VKGVVELFTSQGCASCPPADEALRKMIQKG---DVVGLSYHVDYWNYLGWTDSLASKENTERQYGYM-RALGRNGVYTPQ 117 (270)
T ss_dssp CCCEEEEEECTTCTTCHHHHHHHHHHHHHT---SSEEEEEECSTTCSSSSCCTTCCHHHHHHHHHHH-HHTTCSCCCSSE
T ss_pred CCcEEEEEeCCCCCChHHHHHHHHHhhccC---CeeeEEEEEEEecccccccchhhhhhhHHHHHHH-HHhCCCcccCCE
Confidence 346788899999999999999999987764 354334443211 12356 78899988 99
Q ss_pred EEEEeCCCCCeeecCCCCCCHHHHHHHHHH
Q 022560 264 ILFFPKHSSKPIKYPSERRDVDSLMAFVDA 293 (295)
Q Consensus 264 i~~~~~g~~~~~~~~gg~~~~e~l~~fi~~ 293 (295)
+++ +|+ . ...| .+.+.|.+.|.+
T Consensus 118 I~I--ng~--~-~v~G--~d~~~l~~~l~~ 140 (270)
T 2axo_A 118 AIL--NGR--D-HVKG--ADVRGIYDRLDA 140 (270)
T ss_dssp EEE--TTT--E-EEET--TCHHHHHHHHHH
T ss_pred EEE--CCE--E-eecC--CCHHHHHHHHHH
Confidence 666 555 2 2223 467788877754
No 300
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=96.40 E-value=0.0028 Score=52.57 Aligned_cols=41 Identities=24% Similarity=0.552 Sum_probs=34.8
Q ss_pred CCcEEEEEECCCChhHHHHHHHH---HHHHHHhcCCCeEEEEEEc
Q 022560 203 QEPWLVVLYAPWCQFCQAMEGSY---VELADKLAGNGVKVGKFRA 244 (295)
Q Consensus 203 ~k~vvV~Fya~wC~~C~~~~p~~---~~la~~~~~~~v~~~~vd~ 244 (295)
++++||.|+..+||+|+.+.|.+ .++.+.+.+ ++.|..++.
T Consensus 21 ~~~~vvef~d~~Cp~C~~~~~~l~~~~~l~~~~~~-~v~~~~~~~ 64 (191)
T 3l9s_A 21 GEPQVLEFFSFYCPHCYQFEEVLHVSDNVKKKLPE-GTKMTKYHV 64 (191)
T ss_dssp SSSCEEEEECTTCHHHHHHHHTSCHHHHHHHHSCT-TCCEEEEEC
T ss_pred CCCeEEEEECCCChhHHHhChhccchHHHHHhCCC-CcEEEEEec
Confidence 47899999999999999999987 689999986 566766664
No 301
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=96.34 E-value=0.0091 Score=45.80 Aligned_cols=59 Identities=20% Similarity=0.368 Sum_probs=38.5
Q ss_pred CCcEEEEEEC----CCChhHHHHHHHHHHHHHHhcCCCeE---EEEEEcCCCcHHHH---HHhcCCCCCCeEEEEeCCC
Q 022560 203 QEPWLVVLYA----PWCQFCQAMEGSYVELADKLAGNGVK---VGKFRADGDQKEYA---KQKLQLGSFPTILFFPKHS 271 (295)
Q Consensus 203 ~k~vvV~Fya----~wC~~C~~~~p~~~~la~~~~~~~v~---~~~vd~~~~~~~l~---~~~~~V~~~Pti~~~~~g~ 271 (295)
..+|+|+--. |||++|+..+..|.+. ++. |..+|++.+ .++. ++..+...+|.+++ +|+
T Consensus 15 ~~~Vvvfsk~t~~~p~Cp~C~~ak~lL~~~-------gv~~~~~~~~dv~~~-~~~~~~l~~~sg~~tvP~vfI--~g~ 83 (121)
T 3gx8_A 15 SAPVVLFMKGTPEFPKCGFSRATIGLLGNQ-------GVDPAKFAAYNVLED-PELREGIKEFSEWPTIPQLYV--NKE 83 (121)
T ss_dssp SCSEEEEESBCSSSBCTTHHHHHHHHHHHH-------TBCGGGEEEEECTTC-HHHHHHHHHHHTCCSSCEEEE--TTE
T ss_pred cCCEEEEEeccCCCCCCccHHHHHHHHHHc-------CCCcceEEEEEecCC-HHHHHHHHHHhCCCCCCeEEE--CCE
Confidence 3444444443 5999999999888775 244 777888776 4432 13447788998743 554
No 302
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=96.27 E-value=0.0085 Score=43.39 Aligned_cols=54 Identities=9% Similarity=-0.009 Sum_probs=37.8
Q ss_pred EEEEECCCChhH------HHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHH----HHHHhcC--CCCCCeEEEEeCCC
Q 022560 207 LVVLYAPWCQFC------QAMEGSYVELADKLAGNGVKVGKFRADGDQKE----YAKQKLQ--LGSFPTILFFPKHS 271 (295)
Q Consensus 207 vV~Fya~wC~~C------~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~----l~~~~~~--V~~~Pti~~~~~g~ 271 (295)
|+.|+.++|+.| +.....|.+ .++.|..+|++.+ ++ +. +.++ ...+|.++ .+|+
T Consensus 4 v~ly~~~~C~~c~~~~~~~~ak~~L~~-------~~i~~~~~di~~~-~~~~~~l~-~~~g~~~~~vP~if--i~g~ 69 (93)
T 1t1v_A 4 LRVYSTSVTGSREIKSQQSEVTRILDG-------KRIQYQLVDISQD-NALRDEMR-TLAGNPKATPPQIV--NGNH 69 (93)
T ss_dssp EEEEECSSCSCHHHHHHHHHHHHHHHH-------TTCCCEEEETTSC-HHHHHHHH-HHTTCTTCCSCEEE--ETTE
T ss_pred EEEEEcCCCCCchhhHHHHHHHHHHHH-------CCCceEEEECCCC-HHHHHHHH-HHhCCCCCCCCEEE--ECCE
Confidence 667899999999 666555543 2578888999876 33 33 4667 77999874 3554
No 303
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=96.27 E-value=0.007 Score=45.69 Aligned_cols=58 Identities=16% Similarity=0.343 Sum_probs=39.8
Q ss_pred CCcEEEEEEC-----CCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHH---HhcCCCCCCeEEEEeCCC
Q 022560 203 QEPWLVVLYA-----PWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAK---QKLQLGSFPTILFFPKHS 271 (295)
Q Consensus 203 ~k~vvV~Fya-----~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~---~~~~V~~~Pti~~~~~g~ 271 (295)
..+| |.|.. +||++|+..+..|.+. ++.|..+|++.+ +++.. +..+...+|.+++ +|+
T Consensus 15 ~~~V-vlf~kg~~~~~~Cp~C~~ak~~L~~~-------gi~y~~~di~~d-~~~~~~l~~~~g~~tvP~ifi--~g~ 80 (111)
T 3zyw_A 15 AAPC-MLFMKGTPQEPRCGFSKQMVEILHKH-------NIQFSSFDIFSD-EEVRQGLKAYSSWPTYPQLYV--SGE 80 (111)
T ss_dssp SSSE-EEEESBCSSSBSSHHHHHHHHHHHHT-------TCCCEEEEGGGC-HHHHHHHHHHHTCCSSCEEEE--TTE
T ss_pred cCCE-EEEEecCCCCCcchhHHHHHHHHHHc-------CCCeEEEECcCC-HHHHHHHHHHHCCCCCCEEEE--CCE
Confidence 3444 45677 9999999999888653 467788888876 44330 3347789999744 554
No 304
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=96.26 E-value=0.0083 Score=45.89 Aligned_cols=64 Identities=19% Similarity=0.339 Sum_probs=41.1
Q ss_pred HHHHHhhcCCCCcEEEEEEC-----CCChhHHHHHHHHHHHHHHhcCCCeE-EEEEEcCCCcHHHH---HHhcCCCCCCe
Q 022560 193 MENLARLDHRQEPWLVVLYA-----PWCQFCQAMEGSYVELADKLAGNGVK-VGKFRADGDQKEYA---KQKLQLGSFPT 263 (295)
Q Consensus 193 f~~~i~~~~~~k~vvV~Fya-----~wC~~C~~~~p~~~~la~~~~~~~v~-~~~vd~~~~~~~l~---~~~~~V~~~Pt 263 (295)
+++++. ..+|+| |.. |||++|+..+..|.++ ++. |..+|++++ .++. ++..+...+|.
T Consensus 13 v~~~i~----~~~Vvv-fsk~t~~~p~Cp~C~~ak~lL~~~-------gv~~~~~vdV~~d-~~~~~~l~~~tg~~tvP~ 79 (118)
T 2wem_A 13 LDALVK----KDKVVV-FLKGTPEQPQCGFSNAVVQILRLH-------GVRDYAAYNVLDD-PELRQGIKDYSNWPTIPQ 79 (118)
T ss_dssp HHHHHH----HSSEEE-EESBCSSSBSSHHHHHHHHHHHHT-------TCCCCEEEESSSC-HHHHHHHHHHHTCCSSCE
T ss_pred HHHHhc----cCCEEE-EEecCCCCCccHHHHHHHHHHHHc-------CCCCCEEEEcCCC-HHHHHHHHHHhCCCCcCe
Confidence 445553 344554 554 5999999998888763 363 777888776 4433 03347789999
Q ss_pred EEEEeCCC
Q 022560 264 ILFFPKHS 271 (295)
Q Consensus 264 i~~~~~g~ 271 (295)
++ -+|+
T Consensus 80 vf--I~g~ 85 (118)
T 2wem_A 80 VY--LNGE 85 (118)
T ss_dssp EE--ETTE
T ss_pred EE--ECCE
Confidence 74 3554
No 305
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.25 E-value=0.012 Score=44.36 Aligned_cols=56 Identities=13% Similarity=0.061 Sum_probs=38.5
Q ss_pred cEEEEEECCCChhHH------HHHHHHHHHHHHhcCCCeEEEEEEcCCCcHH----HHHHhc--------CCCCCCeEEE
Q 022560 205 PWLVVLYAPWCQFCQ------AMEGSYVELADKLAGNGVKVGKFRADGDQKE----YAKQKL--------QLGSFPTILF 266 (295)
Q Consensus 205 ~vvV~Fya~wC~~C~------~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~----l~~~~~--------~V~~~Pti~~ 266 (295)
.-|+.|+.++|+.|+ .++..|++ .++.|..+|++.+ ++ +. ..+ +...+|.++
T Consensus 8 m~V~vy~~~~C~~C~~~~~~~~ak~~L~~-------~gi~y~~vdI~~~-~~~~~~l~-~~~~~~~~~~~g~~tvP~vf- 77 (111)
T 2ct6_A 8 MVIRVFIASSSGFVAIKKKQQDVVRFLEA-------NKIEFEEVDITMS-EEQRQWMY-KNVPPEKKPTQGNPLPPQIF- 77 (111)
T ss_dssp CCEEEEECSSCSCHHHHHHHHHHHHHHHH-------TTCCEEEEETTTC-HHHHHHHH-HSCCTTTCCSSSSCCSCEEE-
T ss_pred cEEEEEEcCCCCCcccchhHHHHHHHHHH-------cCCCEEEEECCCC-HHHHHHHH-HHhcccccccCCCCCCCEEE-
Confidence 347788999999999 55555543 2588889999876 43 33 444 667889874
Q ss_pred EeCCC
Q 022560 267 FPKHS 271 (295)
Q Consensus 267 ~~~g~ 271 (295)
.+|+
T Consensus 78 -i~g~ 81 (111)
T 2ct6_A 78 -NGDR 81 (111)
T ss_dssp -ETTE
T ss_pred -ECCE
Confidence 3454
No 306
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=95.73 E-value=0.037 Score=53.09 Aligned_cols=97 Identities=11% Similarity=0.163 Sum_probs=62.7
Q ss_pred ceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcC-CCeEEEEEEcCCCcHHHHHHhcCCCCCCe
Q 022560 185 LVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAG-NGVKVGKFRADGDQKEYAKQKLQLGSFPT 263 (295)
Q Consensus 185 v~~lt~~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~-~~v~~~~vd~~~~~~~l~~~~~~V~~~Pt 263 (295)
+..++.++++.++. ....++++|.|.... .....+++..+.. ..+.+..++ +.+ ..++ ++|+|+.+|+
T Consensus 140 l~~it~~~l~~~l~-~~~~~~vallF~~~~-------s~~~~~~~ldl~~~~~v~v~~v~-~~~-~~l~-~kfgV~~~Ps 208 (519)
T 3t58_A 140 LEPAKLNDIDGFFT-RNKADYLALVFERED-------SYLGREVTLDLSQYHAVAVRRVL-NTE-SDLV-NKFGVTDFPS 208 (519)
T ss_dssp CSBCCHHHHTTGGG-SCCCSEEEEEEECTT-------CCHHHHHHHHTTTCTTEEEEEEE-TTC-HHHH-HHHTCCCSSE
T ss_pred cCcCCHHHHHHHhc-cCCCCeEEEEecCCc-------hHHHHHHHHHhhccCCeeEEEec-Cch-HHHH-HHcCCCCCCe
Confidence 34456677777665 245667888888764 2244556666665 467776665 445 7899 9999999999
Q ss_pred EEEEeCCCCCeeecCCCCCCHHHHHHHHHH
Q 022560 264 ILFFPKHSSKPIKYPSERRDVDSLMAFVDA 293 (295)
Q Consensus 264 i~~~~~g~~~~~~~~gg~~~~e~l~~fi~~ 293 (295)
+++|..+++ ........-..+.+..+|.+
T Consensus 209 lvl~~~nGk-~~~~~v~~~~r~~~~~~l~~ 237 (519)
T 3t58_A 209 CYLLLRNGS-VSRVPVLVESRSFYTSYLRG 237 (519)
T ss_dssp EEEEETTSC-EEECCCSSCSHHHHHHHHTT
T ss_pred EEEEeCCCc-eeecccccccHHHHHHHHHH
Confidence 999987764 33333322333555566554
No 307
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=95.62 E-value=0.024 Score=46.69 Aligned_cols=92 Identities=10% Similarity=0.168 Sum_probs=61.2
Q ss_pred CCCcEEEEEE-CCCChhHH-HHHHHHHHHHHHh-cCCCeE-EEEEEcCCC---------------------cHHHHHHhc
Q 022560 202 RQEPWLVVLY-APWCQFCQ-AMEGSYVELADKL-AGNGVK-VGKFRADGD---------------------QKEYAKQKL 256 (295)
Q Consensus 202 ~~k~vvV~Fy-a~wC~~C~-~~~p~~~~la~~~-~~~~v~-~~~vd~~~~---------------------~~~l~~~~~ 256 (295)
.++.+||+|| +.||+.|. ...+.|.+.+.++ +..++. ++.|..+.. +.+++ +.|
T Consensus 42 ~gk~vVL~fyP~~fTp~Ct~~e~~~f~~~~~~f~~~~g~~~V~gvS~D~~~~~~~~~~~~~~~~f~lLsD~~~~~a-~~y 120 (182)
T 1xiy_A 42 NNKKILLISLPGAFTPTCSTKMIPGYEEEYDYFIKENNFDDIYCITNNDIYVLKSWFKSMDIKKIKYISDGNSSFT-DSM 120 (182)
T ss_dssp TTCEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTSCCSEEEEEESSCHHHHHHHHHHTTCCSSEEEECTTSHHH-HHT
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeCCCHHHHHHHHHHcCCCCceEEEeCchHHH-HHh
Confidence 4677777777 78999999 8899999999999 665563 776766541 14677 788
Q ss_pred CCC-----------CCCeEEEEeCCCCCeeecCC--C---------CCCHHHHHHHHHHh
Q 022560 257 QLG-----------SFPTILFFPKHSSKPIKYPS--E---------RRDVDSLMAFVDAL 294 (295)
Q Consensus 257 ~V~-----------~~Pti~~~~~g~~~~~~~~g--g---------~~~~e~l~~fi~~l 294 (295)
++. .....+++++|..+...... . ..+++++.+.|++.
T Consensus 121 Gv~~~~~~~G~g~~~~R~tfvIddG~V~~~~v~~~~~~~~~~~~~~~~~~~~vL~~L~~~ 180 (182)
T 1xiy_A 121 NMLVDKSNFFMGMRPWRFVAIVENNILVKMFQEKDKQHNIQTDPYDISTVNNVKEFLKNN 180 (182)
T ss_dssp TCEEECGGGTCCEEECCEEEEEETTEEEEEEECSSCCTTCSSCCCSTTSHHHHHHHHHCC
T ss_pred CCceeccccCCCCceEEEEEEEcCCEEEEEEEeCCcccccccCcccCCCHHHHHHHHHhc
Confidence 763 24566777755422111111 1 25688888888753
No 308
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=95.46 E-value=0.028 Score=45.86 Aligned_cols=41 Identities=17% Similarity=0.359 Sum_probs=34.6
Q ss_pred CCcEEEEEECCCChhHHHHHHHH-HHHHHHhcCCCeEEEEEEc
Q 022560 203 QEPWLVVLYAPWCQFCQAMEGSY-VELADKLAGNGVKVGKFRA 244 (295)
Q Consensus 203 ~k~vvV~Fya~wC~~C~~~~p~~-~~la~~~~~~~v~~~~vd~ 244 (295)
.++++|.||...||+|..+.+.+ .++.+.+.+ .+.+..+..
T Consensus 17 ~~~~~ief~d~~CP~C~~~~~~l~~~l~~~~~~-~v~~~~~~l 58 (195)
T 3c7m_A 17 ADKTLIKVFSYACPFCYKYDKAVTGPVSEKVKD-IVAFTPFHL 58 (195)
T ss_dssp CTTEEEEEECTTCHHHHHHHHHTHHHHHHHTTT-TCEEEEEEC
T ss_pred CCcEEEEEEeCcCcchhhCcHHHHHHHHHhCCC-ceEEEEEec
Confidence 56788999999999999999999 999998876 577766654
No 309
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=95.01 E-value=0.067 Score=41.00 Aligned_cols=58 Identities=12% Similarity=0.054 Sum_probs=36.0
Q ss_pred EEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCc---HHHHHHhc--------CCCCCCeEE
Q 022560 206 WLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ---KEYAKQKL--------QLGSFPTIL 265 (295)
Q Consensus 206 vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~---~~l~~~~~--------~V~~~Pti~ 265 (295)
||+.|.++.|+.|+-.. .=..+...+..++|.|-.+|++.+. .++. ++. +...+|.|+
T Consensus 1 ~V~vYtt~~c~~c~~kk-~c~~aK~lL~~kgV~feEidI~~d~~~r~eM~-~~~~~~~~~~~G~~tvPQIF 69 (121)
T 1u6t_A 1 VIRVYIASSSGSTAIKK-KQQDVLGFLEANKIGFEEKDIAANEENRKWMR-ENVPENSRPATGYPLPPQIF 69 (121)
T ss_dssp CEEEEECTTCSCHHHHH-HHHHHHHHHHHTTCCEEEEECTTCHHHHHHHH-HHSCGGGSCSSSSCCSCEEE
T ss_pred CEEEEecCCCCCccchH-HHHHHHHHHHHCCCceEEEECCCCHHHHHHHH-HhccccccccCCCcCCCEEE
Confidence 57788899999995222 1122222233347999999998761 2334 566 667788554
No 310
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=93.35 E-value=0.065 Score=43.62 Aligned_cols=45 Identities=13% Similarity=0.194 Sum_probs=36.3
Q ss_pred CCCcEEEEEE-CCCChhHHHHHHHHHHHHHHhcCCCeE-EEEEEcCC
Q 022560 202 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVK-VGKFRADG 246 (295)
Q Consensus 202 ~~k~vvV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~-~~~vd~~~ 246 (295)
.++.+||+|| ..||+.|....+.|.+.+.+++..++. ++.|.+|.
T Consensus 41 ~gk~vVL~fyP~~fTp~Ct~e~~~f~~~~~ef~~~gv~~VigIS~D~ 87 (171)
T 2xhf_A 41 RGRKGILFSVVGAFVPGSNNHIPEYLSLYDKFKEEGYHTIACIAVND 87 (171)
T ss_dssp TTSEEEEEECSCTTCTTTTSSHHHHHHTHHHHHHTTCCEEEEEESSC
T ss_pred CCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCCEEEEEeCCC
Confidence 4677888888 689999999999999998888765674 77777654
No 311
>2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding, ATP binding, purine nucleotide biosynthetic pathway, structural genomics; 2.10A {Thermus thermophilus} PDB: 2ywc_A*
Probab=93.13 E-value=0.044 Score=52.37 Aligned_cols=83 Identities=10% Similarity=0.078 Sum_probs=49.9
Q ss_pred chHHHHHHHh---cCCEEEEeeec-cCCCcccCC--CCceecCCccccccCCCCCEEEEeeCCCCCHHHHHHHHHHCCCC
Q 022560 33 KVRPLRRALK---GLRAWITGQRK-DQSPGTRSE--IPVVQVDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVP 106 (295)
Q Consensus 33 K~~pl~~~l~---~~~~~~~G~R~-~es~~~R~~--~~~~~~~~~~~~~~~~~~~~~~~~Pi~~W~~~dvw~y~~~~~~p 106 (295)
+...|.+..+ +.+.+++|.-. |.. .+|.. ...+........... ..+.-.++||++|+..||++|.+++|||
T Consensus 295 ~~~~l~~~A~~~~g~~~la~G~~~~D~~-Et~~~g~~~~iks~~~l~~l~~-~~~~~ii~PL~~l~K~EVr~~a~~~glp 372 (503)
T 2ywb_A 295 FVAAFSQVARERGPFRFLAQGTLYPDVI-ESAGGHGAAKIKSHHNVGGLPE-DLEFELLEPFRLLFKDEVRELALLLGLP 372 (503)
T ss_dssp HHHHHHHHHHHHCCCSEEECCCCHHHHH-C-----------------CCCS-SCCCEEECTTTTCCHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHhcCCCCEEEECCcCccch-hhccCCcccccccccccccccc-cccCceEehhhcCCHHHHHHHHHHcCCC
Confidence 4566766554 45689999944 332 13320 000000000000000 1235789999999999999999999999
Q ss_pred CCccccCCccc
Q 022560 107 INSLHSQGYIS 117 (295)
Q Consensus 107 ~~~ly~~g~~s 117 (295)
++.++++.|.+
T Consensus 373 ~~i~~~~P~~~ 383 (503)
T 2ywb_A 373 DTLRLRHPFPG 383 (503)
T ss_dssp HHHHSCCCCCT
T ss_pred hhheecCCCCC
Confidence 99999988876
No 312
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=92.46 E-value=0.21 Score=37.97 Aligned_cols=68 Identities=19% Similarity=0.307 Sum_probs=40.8
Q ss_pred cccHHHHHhhcCCCCcEEEEEE----CCCChhHHHHHHHHHHHHHHhcCCCe-EEEEEEcCCCcHHHH---HHhcCCCCC
Q 022560 190 RTGMENLARLDHRQEPWLVVLY----APWCQFCQAMEGSYVELADKLAGNGV-KVGKFRADGDQKEYA---KQKLQLGSF 261 (295)
Q Consensus 190 ~~~f~~~i~~~~~~k~vvV~Fy----a~wC~~C~~~~p~~~~la~~~~~~~v-~~~~vd~~~~~~~l~---~~~~~V~~~ 261 (295)
.+.++++++ + .+|||+-- +|.|++|++....|.+. ++ .|..+|++++ .++. ++.-+-..+
T Consensus 10 ~e~i~~~i~---~-~~VvvF~Kgt~~~P~C~fc~~ak~lL~~~-------gv~~~~~~~v~~~-~~~r~~l~~~sg~~Tv 77 (118)
T 2wul_A 10 AEQLDALVK---K-DKVVVFLKGTPEQPQCGFSNAVVQILRLH-------GVRDYAAYNVLDD-PELRQGIKDYSNWPTI 77 (118)
T ss_dssp HHHHHHHHH---H-SSEEEEESBCSSSBSSHHHHHHHHHHHHT-------TCCSCEEEETTSC-HHHHHHHHHHHTCCSS
T ss_pred HHHHHHHHh---c-CCEEEEEcCCCCCCCCHHHHHHHHHHHHh-------CCcCeEeecccCC-HHHHHHHHHhccCCCC
Confidence 345566664 3 34444322 36899999988777543 24 3677888776 4433 134466788
Q ss_pred CeEEEEeCCC
Q 022560 262 PTILFFPKHS 271 (295)
Q Consensus 262 Pti~~~~~g~ 271 (295)
|.++ -+|+
T Consensus 78 PqIF--I~g~ 85 (118)
T 2wul_A 78 PQVY--LNGE 85 (118)
T ss_dssp CEEE--ETTE
T ss_pred CeEe--ECCE
Confidence 8874 3554
No 313
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=91.86 E-value=0.49 Score=35.75 Aligned_cols=34 Identities=6% Similarity=-0.044 Sum_probs=25.6
Q ss_pred EEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCC
Q 022560 206 WLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG 246 (295)
Q Consensus 206 vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~ 246 (295)
.|+.|+.++|+.|++....+++. ++.|-.+|+.+
T Consensus 6 ~i~iY~~~~C~~C~ka~~~L~~~-------gi~y~~~di~~ 39 (120)
T 2kok_A 6 SVTIYGIKNCDTMKKARIWLEDH-------GIDYTFHDYKK 39 (120)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHH-------TCCEEEEEHHH
T ss_pred EEEEEECCCChHHHHHHHHHHHc-------CCcEEEEeeeC
Confidence 36678899999999988887763 36666677654
No 314
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=91.71 E-value=0.4 Score=38.68 Aligned_cols=42 Identities=17% Similarity=0.329 Sum_probs=32.2
Q ss_pred CCCcEEEEEECCCChhHHHHHHHH-HHHHHHhcC-CCeEEEEEE
Q 022560 202 RQEPWLVVLYAPWCQFCQAMEGSY-VELADKLAG-NGVKVGKFR 243 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~C~~~~p~~-~~la~~~~~-~~v~~~~vd 243 (295)
..+..|+.|+..-||+|..+.+.+ .+|.+.|.+ .+|.+....
T Consensus 10 ~a~~~i~~f~D~~Cp~C~~~~~~l~~~l~~~~~~~~~v~~~~~~ 53 (186)
T 3bci_A 10 NGKPLVVVYGDYKCPYCKELDEKVMPKLRKNYIDNHKVEYQFVN 53 (186)
T ss_dssp -CCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTSSEEEEEE
T ss_pred CCCeEEEEEECCCChhHHHHHHHHHHHHHHHhccCCeEEEEEEe
Confidence 457789999999999999999998 568777753 246666544
No 315
>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}
Probab=91.69 E-value=0.093 Score=47.80 Aligned_cols=60 Identities=13% Similarity=0.170 Sum_probs=35.0
Q ss_pred EEEEECCCChhHHHHHH-HHHHHHHHhcCCCeEEEEEEcCCCc----HHHHHHhcCCCCCCeEEEEeCCC
Q 022560 207 LVVLYAPWCQFCQAMEG-SYVELADKLAGNGVKVGKFRADGDQ----KEYAKQKLQLGSFPTILFFPKHS 271 (295)
Q Consensus 207 vV~Fya~wC~~C~~~~p-~~~~la~~~~~~~v~~~~vd~~~~~----~~l~~~~~~V~~~Pti~~~~~g~ 271 (295)
|+.|..+||++|++.+. .|+++.-.|.. +.++.+|-...+ ..+. +..+...+|.+++ +|+
T Consensus 263 VvVYsk~~CPyC~~Ak~~LL~~~gV~y~e--idVlEld~~~~~~e~~~~L~-~~tG~~TVPqVFI--~Gk 327 (362)
T 2jad_A 263 IFVASKTYCPYSHAALNTLFEKLKVPRSK--VLVLQLNDMKEGADIQAALY-EINGQRTVPNIYI--NGK 327 (362)
T ss_dssp EEEEECTTCHHHHHHHHHHHTTTCCCTTT--EEEEEGGGSTTHHHHHHHHH-HHHCCCSSCEEEE--TTE
T ss_pred EEEEEcCCCcchHHHHHHHHHHcCCCcce--EEEEEeccccCCHHHHHHHH-HHHCCCCcCEEEE--CCE
Confidence 56689999999998775 44443222222 444443322221 2344 5668899998753 554
No 316
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=91.55 E-value=0.32 Score=39.71 Aligned_cols=42 Identities=17% Similarity=0.123 Sum_probs=33.4
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHh-cCCCeEEEEEEc
Q 022560 202 RQEPWLVVLYAPWCQFCQAMEGSYVELADKL-AGNGVKVGKFRA 244 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~-~~~~v~~~~vd~ 244 (295)
..+.+||.|....||+|+.+.+.+.++.+.+ .+ +|.|+..+.
T Consensus 13 ~a~vtiv~f~D~~Cp~C~~~~~~~~~~l~~~~~g-~v~~v~r~~ 55 (182)
T 3gn3_A 13 HGPRLFEVFLEPTCPFSVKAFFKLDDLLAQAGED-NVTVRIRLQ 55 (182)
T ss_dssp CCSEEEEEEECTTCHHHHHHHTTHHHHHHHHCTT-TEEEEEEEC
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHHHhCCC-CEEEEEEEc
Confidence 4567889999999999999999998877766 44 677776553
No 317
>1t4y_A Adaptive-response sensory-kinase SASA; alpha/beta protein, thioredoxin fold, transferase; NMR {Synechococcus elongatus} SCOP: c.47.1.15 PDB: 1t4z_A
Probab=91.51 E-value=3.2 Score=30.59 Aligned_cols=81 Identities=10% Similarity=0.066 Sum_probs=63.8
Q ss_pred EEEEEECCCChhHHHHHHHHHHHHHHhc-CCCeEEEEEEcCCCcHHHHHHhcCCCCCCeEEEEeCCCCCeeecCCCCCCH
Q 022560 206 WLVVLYAPWCQFCQAMEGSYVELADKLA-GNGVKVGKFRADGDQKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDV 284 (295)
Q Consensus 206 vvV~Fya~wC~~C~~~~p~~~~la~~~~-~~~v~~~~vd~~~~~~~l~~~~~~V~~~Pti~~~~~g~~~~~~~~gg~~~~ 284 (295)
....|.|..-+..+.....+.++.+.+. +..+.+-.||+.++ +.++ +.++|..+||++=....- .-...| .--.
T Consensus 13 L~lLyvag~tp~S~~ai~nL~~i~e~~l~~~~y~LeVIDv~eq-PeLA-E~~~IvATPTLIK~~P~P--~rriiG-d~i~ 87 (105)
T 1t4y_A 13 LLLQLFVDTRPLSQHIVQRVKNILAAVEATVPISLQVINVADQ-PQLV-EYYRLVVTPALVKIGPGS--RQVLSG-IDLT 87 (105)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHHHHHHCCSSCEEEEEEETTTC-HHHH-HHTTCCSSSEEEEEESSS--CEEEES-SCHH
T ss_pred hheeeEeCCCccHHHHHHHHHHHHHHhccCCceEEEEeecccC-HHHH-hHcCeeeccHhhccCCCC--ceEEeC-hHHH
Confidence 4557888888889988888888777766 45799999999999 9999 999999999999887754 344555 4445
Q ss_pred HHHHHHH
Q 022560 285 DSLMAFV 291 (295)
Q Consensus 285 e~l~~fi 291 (295)
++|..|.
T Consensus 88 ~ql~~ww 94 (105)
T 1t4y_A 88 DQLANQL 94 (105)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 6666665
No 318
>2dpl_A GMP synthetase, GMP synthase [glutamine-hydrolyzing] subunit B; pyrococcus horikoshii OT3, structural genomics, NPPSFA; 1.43A {Pyrococcus horikoshii} PDB: 2z0c_A 3a4i_A
Probab=90.58 E-value=0.25 Score=43.97 Aligned_cols=70 Identities=13% Similarity=0.171 Sum_probs=40.2
Q ss_pred cCCEEEEeeeccCCCcccCCCCceecCCccccccCCCCCEEEEeeCCCCCHHHHHHHHHHCCCCCCccccCCcc
Q 022560 43 GLRAWITGQRKDQSPGTRSEIPVVQVDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHSQGYI 116 (295)
Q Consensus 43 ~~~~~~~G~R~~es~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~W~~~dvw~y~~~~~~p~~~ly~~g~~ 116 (295)
+++.+++|...++.--++..+...... .... ...+...++||++|+.+||++|.+.+|+|++..++..|.
T Consensus 120 g~~~la~Gh~~dD~~Et~~~iks~~~~---~~l~-~~~~~~virPL~~l~K~EI~~~a~~~glp~~i~~~~P~~ 189 (308)
T 2dpl_A 120 GAEYLIQGTIAPDWIESQGKIKSHHNV---GGLP-EKLNLKLIEPLRDLYKDEVRELAKFLGLPEKIYNRMPFP 189 (308)
T ss_dssp TCSEEECCCCCC-------------------------CCCEEECTTTTCCHHHHHHHHHHTTCCHHHHTCCCCC
T ss_pred CcCEEEECCCCccchhhccchhhhhcc---ccCC-ccCCCeEEEEcccCCHHHHHHHHHHhCCCceeeecCCCC
Confidence 356899998876531122211111000 0000 012467899999999999999999999998766655443
No 319
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=90.15 E-value=0.39 Score=39.66 Aligned_cols=43 Identities=12% Similarity=0.242 Sum_probs=33.8
Q ss_pred HHHHHHhcCCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 249 KEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 249 ~~l~~~~~~V~~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
...+ .+++|.++||++++.+|+. ...+.| ..+.+.|.++|+++
T Consensus 166 ~~~a-~~~gv~g~Pt~~i~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 208 (216)
T 2in3_A 166 FQRV-AQWGISGFPALVVESGTDR-YLITTG-YRPIEALRQLLDTW 208 (216)
T ss_dssp HHHH-HHTTCCSSSEEEEEETTEE-EEEESS-CCCHHHHHHHHHHH
T ss_pred HHHH-HHcCCcccceEEEEECCEE-EEeccC-CCCHHHHHHHHHHH
Confidence 5667 8899999999999988862 234555 68899999998764
No 320
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=89.66 E-value=0.81 Score=37.99 Aligned_cols=43 Identities=12% Similarity=0.039 Sum_probs=32.5
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHH-Hhc-CCCeEEEEEEc
Q 022560 202 RQEPWLVVLYAPWCQFCQAMEGSYVELAD-KLA-GNGVKVGKFRA 244 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~C~~~~p~~~~la~-~~~-~~~v~~~~vd~ 244 (295)
..+.+||.|...-||+|+.+.+.+..+.+ .|- +.+|.++..+.
T Consensus 14 ~a~vtivef~D~~Cp~C~~~~~~~~~~l~~~~i~~g~v~~v~r~~ 58 (205)
T 3gmf_A 14 AAKLRLVEFVSYTCPHCSHFEIESEGQLKIGMVQPGKGAIEVRNF 58 (205)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEC
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhccCCeEEEEEEeC
Confidence 35678999999999999999988865444 773 23688876664
No 321
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=88.62 E-value=0.37 Score=42.11 Aligned_cols=30 Identities=17% Similarity=0.366 Sum_probs=25.5
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHH
Q 022560 202 RQEPWLVVLYAPWCQFCQAMEGSYVELADK 231 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~C~~~~p~~~~la~~ 231 (295)
.++.+|+.|.-+.||+|+++.+.+.+..+.
T Consensus 146 ~gk~~I~vFtDp~CPYCkkl~~~l~~~l~~ 175 (273)
T 3tdg_A 146 NKDKILYIVSDPMCPHCQKELTKLRDHLKE 175 (273)
T ss_dssp GTTCEEEEEECTTCHHHHHHHHTHHHHHHH
T ss_pred CCCeEEEEEECcCChhHHHHHHHHHHHhhC
Confidence 367899999999999999999999865443
No 322
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=87.91 E-value=0.55 Score=45.33 Aligned_cols=66 Identities=12% Similarity=0.253 Sum_probs=42.3
Q ss_pred ccHHHHHhhcCCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCC--cH----HHHHHhcCCCCCCeE
Q 022560 191 TGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD--QK----EYAKQKLQLGSFPTI 264 (295)
Q Consensus 191 ~~f~~~i~~~~~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~--~~----~l~~~~~~V~~~Pti 264 (295)
+.+++++. .. -++.|..+||++|+..+..|.+. ++.+-.+|++.. .. .+. +..+...+|.+
T Consensus 9 ~~v~~~i~---~~--~v~vy~~~~Cp~C~~~k~~L~~~-------~i~~~~~dv~~~~~~~~~~~~l~-~~~g~~tvP~v 75 (598)
T 2x8g_A 9 QWLRKTVD---SA--AVILFSKTTCPYCKKVKDVLAEA-------KIKHATIELDQLSNGSAIQKCLA-SFSKIETVPQM 75 (598)
T ss_dssp HHHHHHHH---HC--SEEEEECTTCHHHHHHHHHHHHT-------TCCCEEEEGGGSTTHHHHHHHTH-HHHSCCCSCEE
T ss_pred HHHHHHhc---cC--CEEEEECCCChhHHHHHHHHHHC-------CCCcEEEEcccCcchHHHHHHHH-HHhCCceeCEE
Confidence 34555554 22 36779999999999998888754 245556666542 12 222 34678899987
Q ss_pred EEEeCCC
Q 022560 265 LFFPKHS 271 (295)
Q Consensus 265 ~~~~~g~ 271 (295)
|-+|+
T Consensus 76 --~i~g~ 80 (598)
T 2x8g_A 76 --FVRGK 80 (598)
T ss_dssp --EETTE
T ss_pred --EECCE
Confidence 44554
No 323
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=85.78 E-value=0.99 Score=37.13 Aligned_cols=43 Identities=9% Similarity=0.128 Sum_probs=31.7
Q ss_pred HHHHHHhcCCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 249 KEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 249 ~~l~~~~~~V~~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
...+ .+++|.++||+++..+|+. .....| ..+.+.|.+.|+++
T Consensus 159 ~~~a-~~~gv~g~Pt~~v~~~~~~-~~~~~g-~~~~e~~~~~i~~~ 201 (208)
T 3kzq_A 159 LSLA-KSLGVNSYPSLVLQINDAY-FPIEVD-YLSTEPTLKLIRER 201 (208)
T ss_dssp HHHH-HHTTCCSSSEEEEEETTEE-EEECCC-SSCSHHHHHHHHHH
T ss_pred HHHH-HHcCCCcccEEEEEECCEE-EEeeCC-CCCHHHHHHHHHHH
Confidence 4556 7899999999999887763 233344 67888888888764
No 324
>2pg3_A Queuosine biosynthesis protein QUEC; YP_049261.1, hypothetical protein, structural genomics, JOIN for structural genomics; 2.40A {Pectobacterium atrosepticum SCRI1043} SCOP: c.26.2.1
Probab=84.17 E-value=0.64 Score=39.16 Aligned_cols=43 Identities=12% Similarity=0.202 Sum_probs=31.7
Q ss_pred EEEEeeCCCCCHHHHHHHHHHCCC-CC-----CccccCCccccCCCCCCC
Q 022560 82 LVKWNPVANVKGNDIWNFLRTMDV-PI-----NSLHSQGYISIGCEPCTR 125 (295)
Q Consensus 82 ~~~~~Pi~~W~~~dvw~y~~~~~~-p~-----~~ly~~g~~sigc~~ct~ 125 (295)
.--++||++|+..||++|.+++++ |+ ++-|.-+ ...+|-.|..
T Consensus 155 ~~i~~PL~~~~K~ei~~~a~~~gl~~~~~~~t~sC~~~~-~~~~CG~C~~ 203 (232)
T 2pg3_A 155 IRFETPLMWLNKAETWALADYYQQLDTVRYHTLTCYNGI-KGDGCGQCAA 203 (232)
T ss_dssp CEEECTTTTCCHHHHHHHHHHTTCHHHHHHHCCCCTTSC-CTTTTSCSHH
T ss_pred eEEEEecCCCCHHHHHHHHHHcCCCcccccccCCCcCCC-CCCcCCcCHh
Confidence 456799999999999999999999 63 4444422 2257777754
No 325
>1wy5_A TILS, hypothetical UPF0072 protein AQ_1887; N-type ATP-ppase, structural genomics, translation, NPPSFA; 2.42A {Aquifex aeolicus} SCOP: c.26.2.5 d.229.1.1 PDB: 2e21_A* 2e89_A*
Probab=83.79 E-value=0.65 Score=41.25 Aligned_cols=101 Identities=14% Similarity=0.099 Sum_probs=60.4
Q ss_pred HHHHHHHHhcCCCCccc------------cChhhhcchhchHHHHHHHhcC--CEEEEeeeccCCCcccCCCCceecCCc
Q 022560 6 VEVQALVRSKGLFSFYE------------DGHQECCRVRKVRPLRRALKGL--RAWITGQRKDQSPGTRSEIPVVQVDPV 71 (295)
Q Consensus 6 ~~~~~~~~~~~~~~~~~------------~~~~~c~~~~K~~pl~~~l~~~--~~~~~G~R~~es~~~R~~~~~~~~~~~ 71 (295)
..++++.+++|+..... .+...||+..+-..|.+..++. +.+++|-.+++. ...-.+....-...
T Consensus 74 ~~v~~~a~~lgi~~~v~~~~~~~~~~~~~~~~e~~ar~~Ry~~l~~~a~~~g~~~i~~Gh~~dD~-~Et~l~~l~rg~g~ 152 (317)
T 1wy5_A 74 EFCKEFAKERNMKIFVGKEDVRAFAKENRMSLEEAGRFLRYKFLKEILESEGFDCIATAHHLNDL-LETSLLFFTRGTGL 152 (317)
T ss_dssp HHHHHHHHHHTCCEEEEECCHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHTTCSEEECCCCHHHH-HHHHHHHHHHCCCH
T ss_pred HHHHHHHHHcCCcEEEEEEechhhhccCCCCHHHHHHHHHHHHHHHHHHHcCCCEEEEeCchhHH-HHHHHHHHHhCCCc
Confidence 34566677777632111 1345678777888888877754 589999988864 22100000000000
Q ss_pred cccccCCCCC--EEEEeeCCCCCHHHHHHHHHHCCCCCCc
Q 022560 72 FEGLEGGVGS--LVKWNPVANVKGNDIWNFLRTMDVPINS 109 (295)
Q Consensus 72 ~~~~~~~~~~--~~~~~Pi~~W~~~dvw~y~~~~~~p~~~ 109 (295)
.+ -.|-+. ...++||++|+..||++|++.+|||+..
T Consensus 153 -~g-l~~~~~~~~~iirPLl~~~k~eI~~~~~~~gl~~~~ 190 (317)
T 1wy5_A 153 -DG-LIGFLPKEEVIRRPLYYVKRSEIEEYAKFKGLRWVE 190 (317)
T ss_dssp -HH-HHCSCSEETTEECTTTTCCHHHHHHHHHHTTCCCCC
T ss_pred -cc-ccCCCCCCCeEECCCccCCHHHHHHHHHHcCCCeeE
Confidence 00 000000 1478999999999999999999999974
No 326
>2g2q_A Glutaredoxin-2; thioredoxin-fold, oxidoreductase, poxvirus; 2.50A {Vaccinia virus}
Probab=83.20 E-value=2.2 Score=32.13 Aligned_cols=83 Identities=12% Similarity=0.251 Sum_probs=52.3
Q ss_pred CcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCC----c--------------HHHHHHhcCCCCCCeEE
Q 022560 204 EPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD----Q--------------KEYAKQKLQLGSFPTIL 265 (295)
Q Consensus 204 k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~----~--------------~~l~~~~~~V~~~Pti~ 265 (295)
|.++|.|.-|.|+-|+.....+.+ +.+ ...+++||+-.- + ..+. +.++ ..+-.++
T Consensus 2 K~tLILfGKP~C~vCe~~s~~l~~----led-eY~ilrVNIlSfFsK~g~v~~lg~~~~y~lInn~~-~~l~-ne~v~lf 74 (124)
T 2g2q_A 2 KNVLIIFGKPYCSICENVSDAVEE----LKS-EYDILHVDILSFFLKDGDSSMLGDVKRGTLIGNFA-AHLS-NYIVSIF 74 (124)
T ss_dssp CEEEEEEECTTCHHHHHHHHHHHT----TTT-TEEEEEEECCCCCCCTTGGGC-----CCTHHHHHH-HHGG-GGCEEEE
T ss_pred CceEEEeCCCccHHHHHHHHHHHH----hhc-cccEEEEEeeeeeccCCceeeeeccchhhhHHHHH-Hhhc-ccEEEEE
Confidence 568999999999999988777744 444 578888886321 0 2444 5555 4566666
Q ss_pred EEeCCCCCee--ec---------CCCCCCHHHHHHHHHH
Q 022560 266 FFPKHSSKPI--KY---------PSERRDVDSLMAFVDA 293 (295)
Q Consensus 266 ~~~~g~~~~~--~~---------~gg~~~~e~l~~fi~~ 293 (295)
=|+++.+.+. .+ .-...+.++|.+-|++
T Consensus 75 Kydp~s~qmA~V~i~k~~~la~id~~~v~~d~L~~~Ie~ 113 (124)
T 2g2q_A 75 KYNPQTKQMAFVDINKSLDFTKTDKSLVNLEILKSEIEK 113 (124)
T ss_dssp EEETTTTEEEECCCGGGBCTTCCSGGGBCHHHHHHHHHH
T ss_pred EEcCCCCcEEEEehhHeeeeeecchhhccHHHHHHHHHh
Confidence 6765543211 10 1124677888877765
No 327
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=83.16 E-value=1.5 Score=33.64 Aligned_cols=34 Identities=12% Similarity=0.195 Sum_probs=26.5
Q ss_pred EEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCC
Q 022560 207 LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD 247 (295)
Q Consensus 207 vV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~ 247 (295)
++.|+.++|+.|+.....+++. ++.|-.+|+.++
T Consensus 3 i~lY~~~~C~~C~ka~~~L~~~-------gi~y~~~di~~~ 36 (132)
T 1z3e_A 3 VTLYTSPSCTSCRKARAWLEEH-------EIPFVERNIFSE 36 (132)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-------TCCEEEEETTTS
T ss_pred EEEEeCCCChHHHHHHHHHHHc-------CCceEEEEccCC
Confidence 5678899999999988887652 467777787654
No 328
>3bl5_A Queuosine biosynthesis protein QUEC; PREQ1 biosynthesis, RNA modification, tRNA, hydrolase; 2.95A {Bacillus subtilis}
Probab=81.97 E-value=0.65 Score=38.43 Aligned_cols=45 Identities=18% Similarity=0.390 Sum_probs=31.1
Q ss_pred CEEEEeeCCCCCHHHHHHHHHHCCCCCC---ccc--cCCccccCCCCCCC
Q 022560 81 SLVKWNPVANVKGNDIWNFLRTMDVPIN---SLH--SQGYISIGCEPCTR 125 (295)
Q Consensus 81 ~~~~~~Pi~~W~~~dvw~y~~~~~~p~~---~ly--~~g~~sigc~~ct~ 125 (295)
+.-.++||++|+..||++|.+.++||.- .-+ ..|..+++|-.|+.
T Consensus 151 ~~~ii~PL~~~~K~ei~~~a~~~glp~~~~~~t~sc~~~~~~~~CG~C~~ 200 (219)
T 3bl5_A 151 PFVIHTPLMWLNKAETWKLADELGALDFVKNNTLTCYNGIIADGCGECPA 200 (219)
T ss_dssp CCEEECTTTTCCHHHHHHHHHHTTCHHHHHHHCCCSTTSCCSSCCSCSHH
T ss_pred CeEEEeccccCCHHHHHHHHHHcCCCccchhheeeccCCCCCCCCCCCHH
Confidence 3557899999999999999999999421 111 12333366776644
No 329
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=80.52 E-value=1.7 Score=34.88 Aligned_cols=38 Identities=16% Similarity=0.202 Sum_probs=29.1
Q ss_pred HHHHHHhcCCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 249 KEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 249 ~~l~~~~~~V~~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
..++ ++++|.++||+++ +|+ . +.| ..+.+.|.+.|+++
T Consensus 139 ~~~a-~~~gv~GtPt~vv--nG~--~--~~G-~~~~~~l~~~i~~~ 176 (186)
T 3bci_A 139 KKIA-KDNHIKTTPTAFI--NGE--K--VED-PYDYESYEKLLKDK 176 (186)
T ss_dssp HHHH-HHTTCCSSSEEEE--TTE--E--CSC-TTCHHHHHHHHHC-
T ss_pred HHHH-HHcCCCCCCeEEE--CCE--E--cCC-CCCHHHHHHHHHHH
Confidence 4567 7899999999987 554 2 345 68999999998764
No 330
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=79.88 E-value=1.9 Score=34.92 Aligned_cols=41 Identities=17% Similarity=0.217 Sum_probs=30.7
Q ss_pred HHHHHHhcCCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 249 KEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 249 ~~l~~~~~~V~~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
..++ ++++|.++||+++ +|+. .+...| ..+.+.|.+.|+.+
T Consensus 142 ~~~a-~~~gv~GtPtfvv--ng~~-~v~~~G-a~~~e~~~~~i~~l 182 (185)
T 3feu_A 142 KMLS-EKSGISSVPTFVV--NGKY-NVLIGG-HDDPKQIADTIRYL 182 (185)
T ss_dssp HHHH-HHHTCCSSSEEEE--TTTE-EECGGG-CSSHHHHHHHHHHH
T ss_pred HHHH-HHcCCCccCEEEE--CCEE-EEecCC-CCCHHHHHHHHHHH
Confidence 4567 7899999999997 5552 334455 67889998888765
No 331
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=79.52 E-value=2.4 Score=31.91 Aligned_cols=78 Identities=13% Similarity=0.169 Sum_probs=44.1
Q ss_pred EEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCc---HHHHHHhcCCCCCCeEEEEeCCCCCeeecCC---C
Q 022560 207 LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ---KEYAKQKLQLGSFPTILFFPKHSSKPIKYPS---E 280 (295)
Q Consensus 207 vV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~---~~l~~~~~~V~~~Pti~~~~~g~~~~~~~~g---g 280 (295)
+..|+.++|+.|+.....+++. ++.|-.+|+.++. .++. .-++..+.|.--+++..+. ..+-.+ .
T Consensus 2 i~iY~~~~C~~c~ka~~~L~~~-------gi~~~~~di~~~~~~~~el~-~~l~~~~~~~~~l~n~~~~-~~k~l~~~~~ 72 (120)
T 3l78_A 2 VTLFLSPSCTSCRKARAWLNRH-------DVVFQEHNIMTSPLSRDELL-KILSYTENGTEDIISTRSK-VFQKLDIDVD 72 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHHT-------TCCEEEEETTTSCCCHHHHH-HHHHHCSSTHHHHBCTTCH-HHHHTTCCGG
T ss_pred EEEEeCCCCHHHHHHHHHHHHc-------CCCeEEEecccCCCcHHHHH-HHHhhcCCCHHHhhcCCcH-HHHHcCCCcc
Confidence 5678899999999988777542 4777788886541 2332 3333334554445544332 111111 1
Q ss_pred CCCHHHHHHHHHH
Q 022560 281 RRDVDSLMAFVDA 293 (295)
Q Consensus 281 ~~~~e~l~~fi~~ 293 (295)
..+.+++++.+.+
T Consensus 73 ~ls~~~~~~~m~~ 85 (120)
T 3l78_A 73 ELSVSELINLISK 85 (120)
T ss_dssp GCCHHHHHHHHHH
T ss_pred cCCHHHHHHHHHh
Confidence 3566777666543
No 332
>1kor_A Argininosuccinate synthetase; ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: ANP ARG; 1.95A {Thermus thermophilus} SCOP: c.26.2.1 d.210.1.1 PDB: 1j1z_A* 1j21_A* 1kh1_A 1kh2_A* 1kh3_A* 1j20_A*
Probab=78.62 E-value=1.4 Score=40.66 Aligned_cols=65 Identities=14% Similarity=0.219 Sum_probs=41.0
Q ss_pred HHHHHHHh--cCCEEEEeeeccCCCcccCCCCceecCCccccccCCCCCEEEEeeCCCC---CHHHHHHHHHHCCCCCCc
Q 022560 35 RPLRRALK--GLRAWITGQRKDQSPGTRSEIPVVQVDPVFEGLEGGVGSLVKWNPVANV---KGNDIWNFLRTMDVPINS 109 (295)
Q Consensus 35 ~pl~~~l~--~~~~~~~G~R~~es~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~W---~~~dvw~y~~~~~~p~~~ 109 (295)
..|.++.+ +.+++++|-+++.....|-..-+.... |+.--++||++| +.+|||+|++++|||+..
T Consensus 97 ~~L~~~A~~~G~~~IatG~~~d~nDq~~f~~g~~~l~----------p~l~ii~PL~~~~~~tK~eI~~ya~~~gip~~~ 166 (400)
T 1kor_A 97 KHLVRIAEEEGAEAIAHGATGKGNDQVRFELTAYALK----------PDIKVIAPWREWSFQGRKEMIAYAEAHGIPVPV 166 (400)
T ss_dssp HHHHHHHHHHTCSEEECCCCTTSSHHHHHHHHHHHHC----------TTCEEECGGGTCCCCSHHHHHHHHHHTTCCCC-
T ss_pred HHHHHHHHHcCCCEEEECCCCCcccHHHHHHHHHhcC----------CCCEEEEeecccccCCHHHHHHHHHHcCCCccc
Confidence 34455444 346899999885111133211111112 233459999999 999999999999999974
No 333
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=76.69 E-value=2.1 Score=31.80 Aligned_cols=33 Identities=12% Similarity=-0.031 Sum_probs=25.2
Q ss_pred EEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCC
Q 022560 207 LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG 246 (295)
Q Consensus 207 vV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~ 246 (295)
|+.|+.++|+.|+.....|++. ++.|-.+|+.+
T Consensus 2 i~iY~~~~C~~C~kak~~L~~~-------gi~~~~~di~~ 34 (114)
T 1rw1_A 2 YVLYGIKACDTMKKARTWLDEH-------KVAYDFHDYKA 34 (114)
T ss_dssp EEEEECSSCHHHHHHHHHHHHT-------TCCEEEEEHHH
T ss_pred EEEEECCCChHHHHHHHHHHHC-------CCceEEEeecC
Confidence 5678899999999988777652 46777777754
No 334
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=75.28 E-value=4.6 Score=30.36 Aligned_cols=78 Identities=12% Similarity=0.174 Sum_probs=44.4
Q ss_pred EEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCc---HHHHHHhcCCCCCCeEEEEeCCCCCeeecCC---
Q 022560 206 WLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ---KEYAKQKLQLGSFPTILFFPKHSSKPIKYPS--- 279 (295)
Q Consensus 206 vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~---~~l~~~~~~V~~~Pti~~~~~g~~~~~~~~g--- 279 (295)
.+..|+.|+|+.|++....+++- ++.|-.+|+.++. .++. .-++-.+.|.--+++..+. ..+-.+
T Consensus 4 Mi~iY~~~~C~~c~ka~~~L~~~-------gi~~~~~di~~~~~~~~eL~-~~l~~~g~~~~~l~n~~~~-~~k~l~l~~ 74 (120)
T 3fz4_A 4 MLTFYEYPKCSTCRRAKAELDDL-------AWDYDAIDIKKNPPAASLIR-NWLENSGLELKKFFNTSGQ-SYRALGLKD 74 (120)
T ss_dssp SEEEEECSSCHHHHHHHHHHHHH-------TCCEEEEETTTSCCCHHHHH-HHHHHSCCCGGGGBCTTSH-HHHHTTHHH
T ss_pred eEEEEeCCCChHHHHHHHHHHHc-------CCceEEEEeccCchhHHHHH-HHHHHcCCCHHHHhCCCCc-chhhcCccc
Confidence 46678899999999988777642 4777778876651 2332 2233344454455544432 111111
Q ss_pred --CCCCHHHHHHHHH
Q 022560 280 --ERRDVDSLMAFVD 292 (295)
Q Consensus 280 --g~~~~e~l~~fi~ 292 (295)
...+.+++++.+.
T Consensus 75 ~~~~ls~~~~~~lm~ 89 (120)
T 3fz4_A 75 KLHQLSLDEAANLLA 89 (120)
T ss_dssp HGGGCCHHHHHHHHH
T ss_pred ccccCCHHHHHHHHH
Confidence 0246666766654
No 335
>3k32_A Uncharacterized protein MJ0690; predicted subunit of tRNA methyltransferase, methanocaldococcus jannaschii DSM , PSI- 2; 2.50A {Methanocaldococcus jannaschii}
Probab=74.33 E-value=0.51 Score=39.12 Aligned_cols=65 Identities=14% Similarity=0.110 Sum_probs=40.8
Q ss_pred hhcchhchHHHHHHHhcCCEEEEeeeccCCCcc---cCCCCceecCCccccccCCCCCEEEEeeCCCCCHHHHHHHHHHC
Q 022560 27 ECCRVRKVRPLRRALKGLRAWITGQRKDQSPGT---RSEIPVVQVDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTM 103 (295)
Q Consensus 27 ~c~~~~K~~pl~~~l~~~~~~~~G~R~~es~~~---R~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~W~~~dvw~y~~~~ 103 (295)
.|... +..-|.++.++++++++|..++|. .. |..+..+. .. .+.--++||+.|+..||++|.+++
T Consensus 86 ~c~~~-~~~~l~~~A~g~~~i~tGh~~dD~-~et~~~~gl~~~~--~~--------~~~~iirPLl~~~k~eI~~~a~~~ 153 (203)
T 3k32_A 86 AIQYV-HKTVLEILADEYSILADGTRRDDR-VPKLSYSEIQSLE--MR--------KNIQYITPLMGFGYKTLRHLASEF 153 (203)
T ss_dssp HHHHH-HHHHHHHHTTTCSEEECCCCTTCC-SSCCCHHHHHHHH--HH--------HTCEEECGGGGCCHHHHHHHHHHH
T ss_pred HHHHH-HHHHHHHHhcCCCEEEECCCcccc-hhhcchhhccCcc--cc--------cCCeEEeccCCCCHHHHHHHHHHh
Confidence 35443 334555544477899999999985 22 11111000 00 124467899999999999999987
No 336
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=71.21 E-value=2.1 Score=34.25 Aligned_cols=41 Identities=15% Similarity=0.225 Sum_probs=28.9
Q ss_pred HHHHHHhcCCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 249 KEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 249 ~~l~~~~~~V~~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
...+ ++++|.++||+++ +|+. .+...| ..+.+.|.+.|+++
T Consensus 152 ~~~a-~~~gv~gtPt~~i--ng~~-~~~~~g-~~~~~~l~~~i~~~ 192 (195)
T 3c7m_A 152 KASY-DVAKIQGVPAYVV--NGKY-LIYTKS-IKSIDAMADLIREL 192 (195)
T ss_dssp GGHH-HHHHHHCSSEEEE--TTTE-EECGGG-CCCHHHHHHHHHHH
T ss_pred HHHH-HHcCCCccCEEEE--CCEE-EeccCC-CCCHHHHHHHHHHH
Confidence 4456 7889999999766 6652 222224 67899999998865
No 337
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=70.13 E-value=4.6 Score=32.60 Aligned_cols=36 Identities=17% Similarity=0.191 Sum_probs=27.1
Q ss_pred HHHHHhcCCCCCCeEEEEeCCCCCee-ecCCCCCCHHHHHHHH
Q 022560 250 EYAKQKLQLGSFPTILFFPKHSSKPI-KYPSERRDVDSLMAFV 291 (295)
Q Consensus 250 ~l~~~~~~V~~~Pti~~~~~g~~~~~-~~~gg~~~~e~l~~fi 291 (295)
..+ ++++|.++||+++ +|+ .+ ...| ..+.+++.++|
T Consensus 145 ~~a-~~~GV~gtPtf~i--ng~--~~~~~s~-~~~~e~w~~~l 181 (182)
T 3gn3_A 145 KYA-RQNGIHVSPTFMI--NGL--VQPGMSS-GDPVSKWVSDI 181 (182)
T ss_dssp HHH-HHHTCCSSSEEEE--TTE--ECTTCCT-TSCHHHHHHHH
T ss_pred HHH-HHCCCCccCEEEE--CCE--EccCCCC-CCCHHHHHHHh
Confidence 456 7889999999987 565 33 2445 68999988876
No 338
>3ktb_A Arsenical resistance operon trans-acting represso; alpha-beta-alpha sandwich, helix-turn-helix, structural GENO PSI-2; 2.10A {Bacteroides vulgatus}
Probab=69.81 E-value=9.9 Score=28.06 Aligned_cols=51 Identities=14% Similarity=0.281 Sum_probs=38.7
Q ss_pred CCeEEEEEEcCCCc---------HHHHHHhcCCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHH
Q 022560 235 NGVKVGKFRADGDQ---------KEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFV 291 (295)
Q Consensus 235 ~~v~~~~vd~~~~~---------~~l~~~~~~V~~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi 291 (295)
+++.+.+.|..++- .++. +++++..+|.+++ +|+ +...|..-+.++|.+|+
T Consensus 42 ~Gi~V~RyNL~~~P~~F~~N~~V~~~L-~~~G~~~LP~~~V--DGe---vv~~G~yPt~eEl~~~l 101 (106)
T 3ktb_A 42 QGIIVTRHNLRDEPQVYVSNKTVNDFL-QKHGADALPITLV--DGE---IAVSQTYPTTKQMSEWT 101 (106)
T ss_dssp TTCCCEEEETTTCTTHHHHSHHHHHHH-HTTCGGGCSEEEE--TTE---EEECSSCCCHHHHHHHH
T ss_pred CCCEEEEEccccChHHHhcCHHHHHHH-HHcCcccCCEEEE--CCE---EEEeccCCCHHHHHHHh
Confidence 46999999998872 1556 6899999998776 554 44455467899999987
No 339
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=69.35 E-value=7.2 Score=31.46 Aligned_cols=38 Identities=24% Similarity=0.291 Sum_probs=27.2
Q ss_pred HHHHHHhcCCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 249 KEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 249 ~~l~~~~~~V~~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
..++ ++++|.++||+++ +|+ .+ .|+. +.+.|.+.|+.+
T Consensus 144 ~~~a-~~~gv~gtPt~vv--ng~--~~--~~~~-~~e~l~~~i~~l 181 (193)
T 3hz8_A 144 QELT-ETFQIDGVPTVIV--GGK--YK--VEFA-DWESGMNTIDLL 181 (193)
T ss_dssp HHHH-HHTTCCSSSEEEE--TTT--EE--ECCS-SHHHHHHHHHHH
T ss_pred HHHH-HHhCCCcCCEEEE--CCE--EE--ecCC-CHHHHHHHHHHH
Confidence 4567 7899999999997 565 22 1223 888888877754
No 340
>1ni5_A Putative cell cycle protein MESJ; structural genomics, ATPase, PP-type, putative cell cycle PR PSI, protein structure initiative; 2.65A {Escherichia coli} SCOP: b.153.1.2 c.26.2.5 d.229.1.1
Probab=64.96 E-value=5.1 Score=37.13 Aligned_cols=93 Identities=13% Similarity=0.133 Sum_probs=58.5
Q ss_pred HHHHHHHHHhcCCCCccc---------cChhhhcchhchHHHHHHHhcCCEEEEeeeccCCCcc-------cC-------
Q 022560 5 AVEVQALVRSKGLFSFYE---------DGHQECCRVRKVRPLRRALKGLRAWITGQRKDQSPGT-------RS------- 61 (295)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~---------~~~~~c~~~~K~~pl~~~l~~~~~~~~G~R~~es~~~-------R~------- 61 (295)
...++++.+++|+. ++- .+....|+..+-.-|.++.++++.+++|-..++. .. |.
T Consensus 62 ~~~v~~~~~~lgi~-~~v~~~~~~~~~~~~e~~aR~~Ry~~l~~~a~~~~~i~tgH~~dD~-aEt~L~~l~RG~g~~gL~ 139 (433)
T 1ni5_A 62 VTHCENVCQQWQVP-LVVERVQLAQEGLGIEAQARQARYQAFARTLLPGEVLVTAQHLDDQ-CETFLLALKRGSGPAGLS 139 (433)
T ss_dssp HHHHHHHHHHTTCC-EEEECCCCCCSSSTTTTHHHHHHHHHHHHTCCTTEEEECCCCHHHH-HHHHHHHHTTTCCTTGGG
T ss_pred HHHHHHHHHHcCCc-EEEEEecCCCCCCCHHHHHHHHHHHHHHHHHhhCCeEEeeccchHH-HHHHHHHHHcCCCccccc
Confidence 34567788888873 221 1223344444445555555566789999887763 11 21
Q ss_pred CCCceecCCccccccCCCCCEEEEeeCCCCCHHHHHHHHHHCCCCCCc
Q 022560 62 EIPVVQVDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINS 109 (295)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~W~~~dvw~y~~~~~~p~~~ 109 (295)
.++.... .++...++||++++..||.+|.+.++||+..
T Consensus 140 gm~~~~~----------~~~~~iiRPLl~~~k~eI~~y~~~~gl~~~~ 177 (433)
T 1ni5_A 140 AMAEVSE----------FAGTRLIRPLLARTRGELVQWARQYDLRWIE 177 (433)
T ss_dssp CCCSEEE----------ETTEEEECGGGSCCHHHHHHHHHHTTCCCBC
T ss_pred CCCCccc----------cCCceEEccCccCCHHHHHHHHHHcCCCeEE
Confidence 1111110 0235689999999999999999999999853
No 341
>3kgk_A Arsenical resistance operon trans-acting represso; alpha+beta, chaperone, DNA-binding, RE transcription, transcription regulation; 1.40A {Escherichia coli} PDB: 3mwh_A
Probab=64.30 E-value=9.8 Score=28.28 Aligned_cols=52 Identities=13% Similarity=0.285 Sum_probs=38.6
Q ss_pred CCeEEEEEEcCCCc---------HHHHHHhcCCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHH
Q 022560 235 NGVKVGKFRADGDQ---------KEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVD 292 (295)
Q Consensus 235 ~~v~~~~vd~~~~~---------~~l~~~~~~V~~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~ 292 (295)
+++.+.+.|..++- .++. +++++..+|.+++ +|+ +...|..-+.++|.+|+.
T Consensus 39 ~Gi~V~RyNL~~~P~aF~~N~~V~~~L-~~~G~~~LP~~~V--DGe---vv~~G~yPt~eEl~~~lg 99 (110)
T 3kgk_A 39 SGVQIERFNLAQQPMSFVQNEKVKAFI-EASGAEGLPLLLL--DGE---TVMAGRYPKRAELARWFG 99 (110)
T ss_dssp HTCCEEEEETTTCTTHHHHSHHHHHHH-HHHCGGGCCEEEE--TTE---EEEESSCCCHHHHHHHHT
T ss_pred CCCeEEEEccccChHHHhcCHHHHHHH-HHcCcccCCEEEE--CCE---EEEeccCCCHHHHHHHhC
Confidence 36999999998872 1556 6789999998776 555 334454678999999873
No 342
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=64.20 E-value=6.5 Score=32.37 Aligned_cols=34 Identities=15% Similarity=0.167 Sum_probs=27.0
Q ss_pred HhcCCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 254 QKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 254 ~~~~V~~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
++++|.++||+++ +|+ .+.| ..+.+.|.+.|+++
T Consensus 162 ~~~GV~GtPtfvv--ng~----~~~G-~~~~e~l~~~i~~~ 195 (205)
T 3gmf_A 162 NQYNVSGTPSFMI--DGI----LLAG-THDWASLRPQILAR 195 (205)
T ss_dssp HHHCCCSSSEEEE--TTE----ECTT-CCSHHHHHHHHHHH
T ss_pred HHcCCccCCEEEE--CCE----EEeC-CCCHHHHHHHHHHH
Confidence 5689999999988 554 2456 78999999999764
No 343
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=64.13 E-value=12 Score=30.36 Aligned_cols=38 Identities=18% Similarity=0.345 Sum_probs=30.7
Q ss_pred cEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEE
Q 022560 205 PWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFR 243 (295)
Q Consensus 205 ~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd 243 (295)
..|.+|+.+-||.|-...+.+.++.+.+.+ ++.+.-.-
T Consensus 3 ~~I~~~~D~~CP~cy~~~~~l~~l~~~~~~-~v~v~~~p 40 (208)
T 3kzq_A 3 IKLYYVHDPMCSWCWGYKPTIEKLKQQLPG-VIQFEYVV 40 (208)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHHHSCT-TSEEEEEE
T ss_pred eEEEEEECCCCchhhhhhHHHHHHHHhCCC-CceEEEEe
Confidence 357889999999999999999999999865 45554443
No 344
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=63.89 E-value=20 Score=33.77 Aligned_cols=77 Identities=12% Similarity=0.041 Sum_probs=52.3
Q ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCCCeEEEEeCCCCCeeecCCCC
Q 022560 202 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSER 281 (295)
Q Consensus 202 ~~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~Pti~~~~~g~~~~~~~~gg~ 281 (295)
-.++|.+.++.+-|..|..+...++++++. .+ ++.+... +.. . ...|++.+..+|+..-+.|.| -
T Consensus 17 ~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~-s~-~i~~~~~--~~~------~----~~~p~~~~~~~~~~~~i~f~g-~ 81 (521)
T 1hyu_A 17 LTKPVELIATLDDSAKSAEIKELLAEIAEL-SD-KVTFKED--NTL------P----VRKPSFLITNPGSQQGPRFAG-S 81 (521)
T ss_dssp CCSCEEEEEECCSSHHHHHHHHHHHHHHTT-CT-TEEEEEC--TTS------S----SCSSEEEEECTTCCCSCEEES-C
T ss_pred CCCCEEEEEEeCCCcchHHHHHHHHHHHHh-CC-ceEEEEc--CCc------c----cCCCEEEEecCCCcceEEEec-c
Confidence 356888888888899999999999888655 33 4665322 111 0 458999999877655677776 3
Q ss_pred CCHHHHHHHHHH
Q 022560 282 RDVDSLMAFVDA 293 (295)
Q Consensus 282 ~~~e~l~~fi~~ 293 (295)
-.-.+|..||..
T Consensus 82 p~g~e~~s~~~~ 93 (521)
T 1hyu_A 82 PLGHEFTSLVLA 93 (521)
T ss_dssp CCGGGHHHHHHH
T ss_pred CcchhHHHHHHH
Confidence 444556666554
No 345
>3a2k_A TRNA(Ile)-lysidine synthase; ligase, pseudo-knot, ligase/RNA complex; 3.65A {Geobacillus kaustophilus}
Probab=62.85 E-value=4 Score=38.19 Aligned_cols=93 Identities=19% Similarity=0.213 Sum_probs=56.7
Q ss_pred HHHHHHHHhcCCCCccc------------cChhhhcchhchHHHHHHHhcC--CEEEEeeeccCCCcc-------cC---
Q 022560 6 VEVQALVRSKGLFSFYE------------DGHQECCRVRKVRPLRRALKGL--RAWITGQRKDQSPGT-------RS--- 61 (295)
Q Consensus 6 ~~~~~~~~~~~~~~~~~------------~~~~~c~~~~K~~pl~~~l~~~--~~~~~G~R~~es~~~-------R~--- 61 (295)
..++++.+++|+..... ......|+..+-.-|.++..+. ..+++|-..++. .. |.
T Consensus 68 ~~v~~~~~~lgi~~~v~~~~~~~~~~~~~~~~e~~aR~~Ry~~l~~~a~~~g~~~IatgH~~dD~-aEt~L~~l~rG~g~ 146 (464)
T 3a2k_A 68 EFVKRFCVERRILCETAQIDVPAFQRSAGLGAQEAARICRYRFFAELMEKHQAGYVAVGHHGDDQ-VETILMRLVRGSTS 146 (464)
T ss_dssp HHHHHHHHHTTCEEEEEECCCHHHHTTTTCCSHHHHHHHHHHHHHHHHHTTTCCEEECCCCHHHH-HHHHHHHHHHCCCS
T ss_pred HHHHHHHHHcCCcEEEEEechhhhhhccCCCHHHHHHHHHHHHHHHHHHHcCcCEEEEeCChHHH-HHHHHHHHHcCCCc
Confidence 45667777777622111 0123344445556666666654 479999877763 11 11
Q ss_pred ----CCCceecCCccccccCCCCCEEEEeeCCCCCHHHHHHHHHHCCCCCCc
Q 022560 62 ----EIPVVQVDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINS 109 (295)
Q Consensus 62 ----~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~W~~~dvw~y~~~~~~p~~~ 109 (295)
.++.... + ++..-++||++++..||.+|.+.++||+..
T Consensus 147 ~gL~gm~~~~~---~-------~~~~iiRPLl~~~k~eI~~ya~~~gl~~~~ 188 (464)
T 3a2k_A 147 KGYAGIPVKRP---F-------HGGYLIRPFLAVSRAEIEAYCRQMGLSPRC 188 (464)
T ss_dssp SSTTCSCSEEE---C-------SSSEEECGGGGSCHHHHHHHHHHTCCSSCS
T ss_pred ccccCCCcccc---C-------CCCEEECCCccCcHHHHHHHHHHcCCCeEE
Confidence 1211110 0 123578999999999999999999999864
No 346
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=62.73 E-value=5 Score=30.14 Aligned_cols=35 Identities=20% Similarity=0.224 Sum_probs=26.5
Q ss_pred EEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCC
Q 022560 206 WLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD 247 (295)
Q Consensus 206 vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~ 247 (295)
.|..|+.++|+.|+.....+++- ++.|-.+|+.++
T Consensus 5 ~i~iY~~p~C~~c~ka~~~L~~~-------gi~~~~~di~~~ 39 (120)
T 3gkx_A 5 KTLFLQYPACSTCQKAKKWLIEN-------NIEYTNRLIVDD 39 (120)
T ss_dssp CCEEEECTTCHHHHHHHHHHHHT-------TCCCEEEETTTT
T ss_pred EEEEEECCCChHHHHHHHHHHHc-------CCceEEEecccC
Confidence 36678899999999988777542 477777887654
No 347
>1wwj_A Circadian clock protein KAIB; 1.90A {Synechocystis SP} PDB: 1r5p_A 2qke_A 1vgl_A
Probab=61.75 E-value=2.3 Score=31.43 Aligned_cols=61 Identities=8% Similarity=-0.087 Sum_probs=48.1
Q ss_pred CcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCCCeEEE
Q 022560 204 EPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILF 266 (295)
Q Consensus 204 k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~Pti~~ 266 (295)
+.++..|-+-.-+..+.....+.++.+.+.+..+.+-.||+.++ ++++ ..++|-.+||++-
T Consensus 7 ~~~L~LyVaG~tp~S~~ai~nL~~i~e~~l~~~y~LeVIDv~~~-PelA-e~~~IvAtPTLiK 67 (105)
T 1wwj_A 7 TYVLKLYVAGNTPNSVRALKMLKNILEQEFQGVYALKVIDVLKN-PQLA-EEDKILATPTLAK 67 (105)
T ss_dssp EEEEEEEESSCCHHHHHHHHHHHHHHHHHHTTSEEEEEEETTTC-CSCC-TTCEEECHHHHGG
T ss_pred ceEEEEEEeCCCchHHHHHHHHHHHHHHhcCCCeEEEEEEcccC-HhHH-hHCCeEEechhhh
Confidence 34566666657788888888888876655454899999999999 9999 8999999998763
No 348
>3gl5_A Putative DSBA oxidoreductase SCO1869; probable DSBA oxidoreductase structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Streptomyces coelicolor A3}
Probab=61.59 E-value=10 Score=31.88 Aligned_cols=39 Identities=8% Similarity=0.134 Sum_probs=29.0
Q ss_pred HHHHHHhcCCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 249 KEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 249 ~~l~~~~~~V~~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
...+ .+++|.++||+++ +|+ ..+.| ..+.+.|.+.|+++
T Consensus 173 ~~~a-~~~Gv~GvPtfvv--~g~---~~v~G-a~~~e~~~~~i~~~ 211 (239)
T 3gl5_A 173 EREA-AQLGATGVPFFVL--DRA---YGVSG-AQPAEVFTQALTQA 211 (239)
T ss_dssp HHHH-HHTTCCSSSEEEE--TTT---EEEES-SCCHHHHHHHHHHH
T ss_pred HHHH-HHCCCCeeCeEEE--CCc---EeecC-CCCHHHHHHHHHHH
Confidence 4456 6889999999987 554 23355 68899999888764
No 349
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=60.68 E-value=9 Score=30.75 Aligned_cols=20 Identities=5% Similarity=0.225 Sum_probs=16.2
Q ss_pred HHHHHHhcCCCCCCeEEEEeCCC
Q 022560 249 KEYAKQKLQLGSFPTILFFPKHS 271 (295)
Q Consensus 249 ~~l~~~~~~V~~~Pti~~~~~g~ 271 (295)
...+ ++++|.++||+++ +|+
T Consensus 135 ~~~a-~~~gv~GtPt~~v--ng~ 154 (189)
T 3l9v_A 135 ERLF-KEYGVRGTPSVYV--RGR 154 (189)
T ss_dssp HHHH-HHTTCCSSSEEEE--TTT
T ss_pred HHHH-HHhCCCccCEEEE--CCE
Confidence 4566 7899999999997 565
No 350
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=59.88 E-value=23 Score=28.55 Aligned_cols=39 Identities=15% Similarity=0.333 Sum_probs=28.9
Q ss_pred CcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEE
Q 022560 204 EPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFR 243 (295)
Q Consensus 204 k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd 243 (295)
...|+.|+..-||.|....+.+.++.+.... ++.+.-..
T Consensus 7 ~~~I~~f~D~~CP~C~~~~~~~~~l~~~~~~-~v~v~~~~ 45 (216)
T 2in3_A 7 KPVLWYIADPMCSWCWGFAPVIENIRQEYSA-FLTVKIMP 45 (216)
T ss_dssp CCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEE
T ss_pred ceeEEEEECCCCchhhcchHHHHHHHhcCCC-CeEEEEee
Confidence 3567888899999999999999998884332 45555443
No 351
>1xng_A NH(3)-dependent NAD(+) synthetase; amidotransferase, ligase; HET: DND ATP; 1.70A {Helicobacter pylori} SCOP: c.26.2.1 PDB: 1xnh_A
Probab=58.79 E-value=5.9 Score=34.00 Aligned_cols=26 Identities=15% Similarity=0.515 Sum_probs=23.4
Q ss_pred EEEEeeCCCCCHHHHHHHHHHCCCCC
Q 022560 82 LVKWNPVANVKGNDIWNFLRTMDVPI 107 (295)
Q Consensus 82 ~~~~~Pi~~W~~~dvw~y~~~~~~p~ 107 (295)
.--++||++|+..+|++|++..|||.
T Consensus 150 ~~~i~PL~~l~K~ev~~la~~~gip~ 175 (268)
T 1xng_A 150 ACAINPIGELFKTEVYELARRLNIPK 175 (268)
T ss_dssp CCSEETTTTSCHHHHHHHHHHTTCCH
T ss_pred CeeEEecCCCCHHHHHHHHHHcCCcH
Confidence 34789999999999999999999984
No 352
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=58.58 E-value=6.3 Score=31.98 Aligned_cols=38 Identities=13% Similarity=0.108 Sum_probs=28.6
Q ss_pred HHHHHHhcCCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 022560 249 KEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 294 (295)
Q Consensus 249 ~~l~~~~~~V~~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~l 294 (295)
...+ .+++|.++||+++ +|+ .+.| ....+.|.+.|++.
T Consensus 157 ~~~a-~~~Gv~G~Ptfvi--~g~----~~~G-~~~~~~l~~~l~~~ 194 (203)
T 2imf_A 157 THAA-IERKVFGVPTMFL--GDE----MWWG-NDRLFMLESAMGRL 194 (203)
T ss_dssp HHHH-HHTTCCSSSEEEE--TTE----EEES-GGGHHHHHHHHHHH
T ss_pred HHHH-HHCCCCcCCEEEE--CCE----EEEC-CCCHHHHHHHHhcc
Confidence 4556 7899999999988 553 3455 67888888888764
No 353
>2d8c_A Phosphatidylcholine:ceramide cholinephosphotransferase 1; cell-free protein synthesis, protein regulation, lipid metabolism, structural genomics; NMR {Mus musculus} SCOP: a.60.1.2
Probab=57.78 E-value=5 Score=29.10 Aligned_cols=23 Identities=13% Similarity=0.182 Sum_probs=19.6
Q ss_pred EEeeCCCCCHHHHHHHHHHCCCC
Q 022560 84 KWNPVANVKGNDIWNFLRTMDVP 106 (295)
Q Consensus 84 ~~~Pi~~W~~~dvw~y~~~~~~p 106 (295)
.-.|+..|+.+||-.|+...|+.
T Consensus 13 ~~~~v~~Ws~edV~~WL~~~Gl~ 35 (97)
T 2d8c_A 13 TMKEVVYWSPKKVADWLLENAMP 35 (97)
T ss_dssp CCSCCSSCCTTHHHHHHHHTTCT
T ss_pred CCCchhhCCHHHHHHHHHHcCCH
Confidence 35689999999999999998753
No 354
>3lyk_A Stringent starvation protein A homolog; structural genomics, GST-superfamily, SSPA, PSI-2, protein structure initiative; 2.10A {Haemophilus influenzae}
Probab=56.21 E-value=46 Score=26.63 Aligned_cols=56 Identities=11% Similarity=0.157 Sum_probs=37.8
Q ss_pred CcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCCCeEE
Q 022560 204 EPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTIL 265 (295)
Q Consensus 204 k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~Pti~ 265 (295)
...+..|+.+.|+.|....=.+... +-.+.+..||......++. .......+|++.
T Consensus 4 ~~~~~Ly~~~~sp~~~~v~~~L~~~-----gi~~e~~~v~~~~~~~~~~-~~~P~g~vP~L~ 59 (216)
T 3lyk_A 4 RSVMTLFSNKDDIYCHQVKIVLAEK-----GVLYENAEVDLQALPEDLM-ELNPYGTVPTLV 59 (216)
T ss_dssp --CEEEEECTTCHHHHHHHHHHHHH-----TCCCEEEECCTTSCCHHHH-HHCTTCCSCEEE
T ss_pred CceEEEEeCCCChhHHHHHHHHHHc-----CCCcEEEeCCcccCcHHHH-hhCCCCCcCeEE
Confidence 3457889999999999876554433 3246666777655435666 666677899987
No 355
>3f0i_A Arsenate reductase; structural genomics, IDP01300, vibrio CH center for structural genomics of infectious diseases, CSGI oxidoreductase; HET: MSE; 1.88A {Vibrio cholerae}
Probab=55.00 E-value=8.4 Score=28.81 Aligned_cols=34 Identities=12% Similarity=0.119 Sum_probs=24.8
Q ss_pred EEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCC
Q 022560 206 WLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG 246 (295)
Q Consensus 206 vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~ 246 (295)
.+..|+.|+|+.|++....+++ . ++.|-.+|+.+
T Consensus 5 ~i~iY~~p~C~~c~ka~~~L~~-----~--gi~~~~~di~~ 38 (119)
T 3f0i_A 5 SVVIYHNPKCSKSRETLALLEN-----Q--GIAPQVIKYLE 38 (119)
T ss_dssp CCEEECCTTCHHHHHHHHHHHH-----T--TCCCEEECHHH
T ss_pred EEEEEECCCChHHHHHHHHHHH-----c--CCceEEEEecc
Confidence 3567889999999998877764 2 36666676644
No 356
>2gle_A Neurabin-1; SAM domain, scaffold, protein protein interaction, protein binding; NMR {Rattus norvegicus}
Probab=54.18 E-value=3.4 Score=28.04 Aligned_cols=29 Identities=7% Similarity=0.083 Sum_probs=22.3
Q ss_pred eeCCCCCHHHHHHHHHHCCCCCCccccCCccc
Q 022560 86 NPVANVKGNDIWNFLRTMDVPINSLHSQGYIS 117 (295)
Q Consensus 86 ~Pi~~W~~~dvw~y~~~~~~p~~~ly~~g~~s 117 (295)
.|+.+||.+||-.++...+++ -|..-|..
T Consensus 2 ~~v~~Ws~~~V~~WL~~~gl~---~y~~~F~~ 30 (74)
T 2gle_A 2 HMVHEWSVQQVSHWLVGLSLD---QYVSEFSA 30 (74)
T ss_dssp CCGGGCCSGGGHHHHHHTTTH---HHHHHHTT
T ss_pred CCcccCCHHHHHHHHHHCCCH---HHHHHHHH
Confidence 489999999999999998853 35544543
No 357
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=54.04 E-value=7.9 Score=31.59 Aligned_cols=20 Identities=20% Similarity=0.388 Sum_probs=15.6
Q ss_pred HHHHHHhcCCCCCCeEEEEeCCC
Q 022560 249 KEYAKQKLQLGSFPTILFFPKHS 271 (295)
Q Consensus 249 ~~l~~~~~~V~~~Pti~~~~~g~ 271 (295)
...+ +.++|.++|++++ +|+
T Consensus 40 ~~~a-~~~gi~gvP~fvi--ngk 59 (197)
T 1un2_A 40 EKAA-ADVQLRGVPAMFV--NGK 59 (197)
T ss_dssp HHHH-HHTTCCSSSEEEE--TTT
T ss_pred HHHH-HHcCCCcCCEEEE--cce
Confidence 4556 7899999999976 555
No 358
>1s3c_A Arsenate reductase; ARSC, arsenite, oxidoreductase; 1.25A {Escherichia coli} PDB: 1sd9_A 1i9d_A 1j9b_A 1sd8_A 1jzw_A* 1sk1_A* 1sjz_A* 1sk0_A* 1sk2_A 1s3d_A
Probab=53.99 E-value=7.6 Score=30.03 Aligned_cols=78 Identities=10% Similarity=0.079 Sum_probs=44.8
Q ss_pred EEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCc---HHHHHHhcCCCCCCeEEEEeCCCCCeeec---CCC
Q 022560 207 LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ---KEYAKQKLQLGSFPTILFFPKHSSKPIKY---PSE 280 (295)
Q Consensus 207 vV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~---~~l~~~~~~V~~~Pti~~~~~g~~~~~~~---~gg 280 (295)
+..|+.++|+.|++....|++- ++.|-.+|+.++. .++. .-++-.++|.--+++..+. .+.- ...
T Consensus 4 itiY~~p~C~~crkak~~L~~~-------gi~~~~idi~~~~~~~~eL~-~~~~~~g~p~~~l~n~~~~-~yk~l~l~~~ 74 (141)
T 1s3c_A 4 ITIYHNPASGTSRNTLEMIRNS-------GTEPTIILYLENPPSRDELV-KLIADMGISVRALLRKNVE-PYEQLGLAED 74 (141)
T ss_dssp CEEECCTTCHHHHHHHHHHHHT-------TCCCEEECTTTSCCCHHHHH-HHHHHHTSCHHHHBCSSSH-HHHHTTTTSS
T ss_pred EEEEECCCChHHHHHHHHHHHc-------CCCEEEEECCCCCccHHHHH-HHhcccCCCHHHhccCCch-hHHhcCCccc
Confidence 4568899999999988777652 4777778876641 2333 3333445565555544432 1111 111
Q ss_pred CCCHHHHHHHHHH
Q 022560 281 RRDVDSLMAFVDA 293 (295)
Q Consensus 281 ~~~~e~l~~fi~~ 293 (295)
..+.+++++.+.+
T Consensus 75 ~ls~~~~~~lm~~ 87 (141)
T 1s3c_A 75 KFTDDQLIDFMLQ 87 (141)
T ss_dssp CCCHHHHHHHHHH
T ss_pred cCCHHHHHHHHHh
Confidence 3567777766643
No 359
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=53.92 E-value=16 Score=29.40 Aligned_cols=20 Identities=25% Similarity=0.424 Sum_probs=16.3
Q ss_pred HHHHHHhcCCCCCCeEEEEeCCC
Q 022560 249 KEYAKQKLQLGSFPTILFFPKHS 271 (295)
Q Consensus 249 ~~l~~~~~~V~~~Pti~~~~~g~ 271 (295)
...+ ++++|.++||+++ +|+
T Consensus 141 ~~~a-~~~gv~gtPtfvv--nG~ 160 (191)
T 3l9s_A 141 EKAA-ADLQLQGVPAMFV--NGK 160 (191)
T ss_dssp HHHH-HHTTCCSSSEEEE--TTT
T ss_pred HHHH-HHhCCcccCEEEE--CCE
Confidence 4566 7899999999987 565
No 360
>3bs7_A Protein aveugle; sterIle alpha motif (SAM) domain, cytoplasm, membrane, sensory transduction, vision, signaling protein; 1.90A {Drosophila melanogaster}
Probab=53.86 E-value=4.2 Score=27.91 Aligned_cols=31 Identities=13% Similarity=0.017 Sum_probs=22.3
Q ss_pred eeCCCCCHHHHHHHHHHCCCCCCccccCCccc
Q 022560 86 NPVANVKGNDIWNFLRTMDVPINSLHSQGYIS 117 (295)
Q Consensus 86 ~Pi~~W~~~dvw~y~~~~~~p~~~ly~~g~~s 117 (295)
.|+..||.+||-+++...++- .+-|..-|..
T Consensus 1 k~v~~Wt~~~V~~WL~~~~~g-l~~y~~~F~~ 31 (78)
T 3bs7_A 1 KAVYLWTVSDVLKWYRRHCGE-YTQYEQLFAQ 31 (78)
T ss_dssp CCGGGCCHHHHHHHHHHHSGG-GGGGHHHHHH
T ss_pred CChhhCCHHHHHHHHHHHhcC-HHHHHHHHHH
Confidence 489999999999999996222 2346655553
No 361
>2hma_A Probable tRNA (5-methylaminomethyl-2-thiouridylat methyltransferase; alpha-beta, beta barrel, structural genomics, PSI-2; HET: MSE SAM; 2.41A {Streptococcus pneumoniae}
Probab=53.24 E-value=7.9 Score=35.16 Aligned_cols=80 Identities=10% Similarity=0.096 Sum_probs=47.1
Q ss_pred hhcchhchHHHHHHHhcC--CEEEEeeeccCCCcccCCC-Ccee-cCCcc-ccc-cCCCC---CEEEEeeCCCCCHHHHH
Q 022560 27 ECCRVRKVRPLRRALKGL--RAWITGQRKDQSPGTRSEI-PVVQ-VDPVF-EGL-EGGVG---SLVKWNPVANVKGNDIW 97 (295)
Q Consensus 27 ~c~~~~K~~pl~~~l~~~--~~~~~G~R~~es~~~R~~~-~~~~-~~~~~-~~~-~~~~~---~~~~~~Pi~~W~~~dvw 97 (295)
.|+...|-..|.+...++ +.+++|-..++. ..+... .... .++.- +.. -.+-+ ..-.++||.+++..+|.
T Consensus 105 ~C~r~ik~~~l~~~A~~~G~d~IatGH~a~d~-~~~~~~~~l~rg~d~~kdqsyfL~~l~~~~l~~~i~PL~~~~K~eVr 183 (376)
T 2hma_A 105 MCNKEIKFKAFLDYAITLGADYVATGHYARVA-RDEDGTVHMLRGVDNGKDQTYFLSQLSQEQLQKTMFPLGHLEKPEVR 183 (376)
T ss_dssp HHHHHTTTTHHHHHHHTTTCSEEECCCSEEEE-ECSSSCEEEEECSSTTTCCGGGGTTCCHHHHTTEECTTTTCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEEECcchhhh-hCCCchhhhhhccccccccchhccCCChhhcCcEEecCcCCCHHHHH
Confidence 466777777787777655 478999876653 101111 1111 11100 000 00000 02478999999999999
Q ss_pred HHHHHCCCCC
Q 022560 98 NFLRTMDVPI 107 (295)
Q Consensus 98 ~y~~~~~~p~ 107 (295)
+|.++++||+
T Consensus 184 ~~A~~~gl~~ 193 (376)
T 2hma_A 184 RLAEEAGLST 193 (376)
T ss_dssp HHHHHTTCTT
T ss_pred HHHHHcCCCc
Confidence 9999999996
No 362
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=53.03 E-value=6.7 Score=29.44 Aligned_cols=78 Identities=12% Similarity=0.089 Sum_probs=43.8
Q ss_pred EEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCc---HHHHHHhcCCCCC-CeEEEEeCCCCCeeecC---C
Q 022560 207 LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ---KEYAKQKLQLGSF-PTILFFPKHSSKPIKYP---S 279 (295)
Q Consensus 207 vV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~---~~l~~~~~~V~~~-Pti~~~~~g~~~~~~~~---g 279 (295)
+..|+.++|+.|++....+++ .++.|-.+|+.++. .++. .-++-.+. |.--+++..+. .++-. .
T Consensus 7 i~iY~~p~C~~c~ka~~~L~~-------~gi~~~~~di~~~~~~~~eL~-~~l~~~g~~~~~~l~n~~~~-~~k~l~l~~ 77 (121)
T 3rdw_A 7 VTIYHNPRCSKSRETLALVEQ-------QGITPQVVLYLETPPSVDKLK-ELLQQLGFSDARQLMRTKED-LYKTLNLDD 77 (121)
T ss_dssp CEEECCTTCHHHHHHHHHHHT-------TTCCCEEECTTTSCCCHHHHH-HHHHHTTCSSGGGGBCTTSH-HHHHTTTTC
T ss_pred EEEEECCCCHHHHHHHHHHHH-------cCCCcEEEeeccCCCcHHHHH-HHHHhcCCcCHHHHhcCCCh-hhhhcCccc
Confidence 567889999999998877653 24777778876641 2222 22233344 44345544332 11111 1
Q ss_pred CCCCHHHHHHHHHH
Q 022560 280 ERRDVDSLMAFVDA 293 (295)
Q Consensus 280 g~~~~e~l~~fi~~ 293 (295)
...+.+++.+.+.+
T Consensus 78 ~~ls~~~~~~lm~~ 91 (121)
T 3rdw_A 78 RGLTQDQLLQAMAD 91 (121)
T ss_dssp TTCCHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHh
Confidence 13577777777653
No 363
>2e18_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, NPPSFA, national project on Pro structural and functional analyses; 2.10A {Pyrococcus horikoshii}
Probab=51.55 E-value=6.5 Score=33.44 Aligned_cols=29 Identities=17% Similarity=0.567 Sum_probs=24.9
Q ss_pred EEEEeeCCCCCHHHHHHHHHHCCCCCCcc
Q 022560 82 LVKWNPVANVKGNDIWNFLRTMDVPINSL 110 (295)
Q Consensus 82 ~~~~~Pi~~W~~~dvw~y~~~~~~p~~~l 110 (295)
.--++||++|+..||++|.+.+|+|++-+
T Consensus 147 ~~~i~Pl~~l~K~ev~~la~~~gip~~i~ 175 (257)
T 2e18_A 147 ASDYAPIINLYKTEVWEIAKRIGVPERIV 175 (257)
T ss_dssp CSSBCTTTTSCHHHHHHHHHHHTCCHHHH
T ss_pred ccCEeecCCCcHHHHHHHHHHcCCCHHHh
Confidence 34689999999999999999999996433
No 364
>1kw4_A Polyhomeotic; SAM domain, polycomb group, polymer, DNA binding protein; 1.75A {Drosophila melanogaster} SCOP: a.60.1.2 PDB: 1pk1_A
Probab=48.64 E-value=8.3 Score=27.37 Aligned_cols=28 Identities=21% Similarity=0.440 Sum_probs=20.8
Q ss_pred eeCCCCCHHHHHHHHHHC-CCCCCccccCCcc
Q 022560 86 NPVANVKGNDIWNFLRTM-DVPINSLHSQGYI 116 (295)
Q Consensus 86 ~Pi~~W~~~dvw~y~~~~-~~p~~~ly~~g~~ 116 (295)
.|+..|+.+||..|+... |+ +-|..-|+
T Consensus 12 ~~v~~Ws~edV~~wL~~l~gl---~~y~~~F~ 40 (89)
T 1kw4_A 12 PPISSWSVDDVSNFIRELPGC---QDYVDDFI 40 (89)
T ss_dssp CCGGGCCHHHHHHHHHTSTTC---GGGHHHHH
T ss_pred CCchhCCHHHHHHHHHHCcCh---HHHHHHHH
Confidence 489999999999999987 43 33444444
No 365
>1gpm_A GMP synthetase, XMP aminase; class I glutamine amidotransferase, N-type ATP pyrophosphata transferase (glutamine amidotransferase); HET: AMP CIT; 2.20A {Escherichia coli} SCOP: c.23.16.1 c.26.2.1 d.52.2.1
Probab=47.95 E-value=7.4 Score=37.01 Aligned_cols=35 Identities=9% Similarity=0.198 Sum_probs=29.5
Q ss_pred EEEEeeCCCCCHHHHHHHHHHCCCCCCccccCCcc
Q 022560 82 LVKWNPVANVKGNDIWNFLRTMDVPINSLHSQGYI 116 (295)
Q Consensus 82 ~~~~~Pi~~W~~~dvw~y~~~~~~p~~~ly~~g~~ 116 (295)
.--++||++++..||++|.++.|||++.+++.-|.
T Consensus 370 ~~~i~PL~~l~K~EVr~la~~lglp~~i~~~~P~~ 404 (525)
T 1gpm_A 370 MGLVEPLKELFKDEVRKIGLELGLPYDMLYRHPFP 404 (525)
T ss_dssp CEEECTTTTCCHHHHHHHHHHTTCCHHHHTSCCCC
T ss_pred CcEEehhhcCCHHHHHHHHHHcCCCHHhcccCCCC
Confidence 35789999999999999999999998766665553
No 366
>3bq7_A Diacylglycerol kinase delta; SAM domain, polymerization domain, alternative splicing, cytoplasm, membrane, metal-binding, phorbol-ester binding; 2.90A {Homo sapiens}
Probab=47.47 E-value=9.7 Score=26.31 Aligned_cols=30 Identities=10% Similarity=0.087 Sum_probs=23.0
Q ss_pred EeeCCCCCHHHHHHHHHHCCCCCCccccCCccc
Q 022560 85 WNPVANVKGNDIWNFLRTMDVPINSLHSQGYIS 117 (295)
Q Consensus 85 ~~Pi~~W~~~dvw~y~~~~~~p~~~ly~~g~~s 117 (295)
-.|+..|+.++|-+++...|++- |..-|..
T Consensus 4 ~~~v~~Ws~~~V~~WL~~lgl~~---Y~~~F~~ 33 (81)
T 3bq7_A 4 TRPVHLWGTEEVAAWLEHLSLCE---YKDIFTR 33 (81)
T ss_dssp -CCGGGCCHHHHHHHHHHTTCGG---GHHHHHH
T ss_pred CCChhhCCHHHHHHHHHHCCCHH---HHHHHHH
Confidence 35899999999999999988643 6555544
No 367
>4dej_A Glutathione S-transferase related protein; transferase-like protein, transcription regulation; 2.90A {Idiomarina loihiensis}
Probab=45.20 E-value=83 Score=25.53 Aligned_cols=57 Identities=12% Similarity=0.108 Sum_probs=39.4
Q ss_pred CCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCC-CCCCeEE
Q 022560 203 QEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQL-GSFPTIL 265 (295)
Q Consensus 203 ~k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V-~~~Pti~ 265 (295)
.+..+..|+.+.|+.|....-.+... +-.+.+..||......++. ..... ..+|++.
T Consensus 9 ~~~~~~Ly~~~~sp~~~~vr~~L~~~-----gi~~e~~~v~~~~~~~~~~-~~nP~~g~vPvL~ 66 (231)
T 4dej_A 9 KRSVMTLYSGKDDLKSHQVRLVLAEK-----GVGVEITYVTDESTPEDLL-QLNPYPEAKPTLV 66 (231)
T ss_dssp CCSSCEEEECSSCHHHHHHHHHHHHH-----TCBCEEEECCSSCCCHHHH-HHCCSSSCCSEEE
T ss_pred CCceEEEEcCCCChHHHHHHHHHHHc-----CCCcEEEEcCcccCCHHHH-HhCCCCCCCCEEE
Confidence 45667889999999999877555443 3245666677664435666 55666 7899997
No 368
>3fz5_A Possible 2-hydroxychromene-2-carboxylate isomeras; 2-hydroxychromene-2-carboxylate ISO structural genomics, PSI-2; HET: MSE GSH PGE; 2.40A {Rhodobacter sphaeroides 2}
Probab=45.03 E-value=16 Score=29.63 Aligned_cols=37 Identities=11% Similarity=0.124 Sum_probs=27.8
Q ss_pred HHHHHHhcCCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHH
Q 022560 249 KEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDA 293 (295)
Q Consensus 249 ~~l~~~~~~V~~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~ 293 (295)
...+ .+++|.++||+++ +|+ .+.| ....+.|.++|.+
T Consensus 163 ~~~a-~~~Gv~GvPtfvv--~g~----~~~G-~~~~~~l~~~l~~ 199 (202)
T 3fz5_A 163 GEDA-VARGIFGSPFFLV--DDE----PFWG-WDRMEMMAEWIRT 199 (202)
T ss_dssp HHHH-HHTTCCSSSEEEE--TTE----EEES-GGGHHHHHHHHHT
T ss_pred HHHH-HHCCCCcCCEEEE--CCE----EEec-CCCHHHHHHHHhc
Confidence 4556 6889999999988 443 3556 6788888888864
No 369
>1s3a_A NADH-ubiquinone oxidoreductase B8 subunit; CI-B8, ndufa2, complex I; NMR {Homo sapiens} SCOP: c.47.1.22
Probab=41.81 E-value=94 Score=22.24 Aligned_cols=74 Identities=5% Similarity=-0.081 Sum_probs=48.7
Q ss_pred EEEEEECCCChhHHHHHHHHHHHHHHhcC--CCeEEEEEEcCCCcHHHHHHhcCCCCCCeEEEE-eCCCCCeeecCCCCC
Q 022560 206 WLVVLYAPWCQFCQAMEGSYVELADKLAG--NGVKVGKFRADGDQKEYAKQKLQLGSFPTILFF-PKHSSKPIKYPSERR 282 (295)
Q Consensus 206 vvV~Fya~wC~~C~~~~p~~~~la~~~~~--~~v~~~~vd~~~~~~~l~~~~~~V~~~Pti~~~-~~g~~~~~~~~gg~~ 282 (295)
-|...|-+|.+.++.++..+..-...++. ..+.|... .. -..-|.+..+ .+|.++.+...+ .
T Consensus 21 ~l~~~yc~~~~sS~G~R~Fl~~~l~~~k~~NP~v~i~v~---~~----------~~~~P~i~a~Y~~G~ek~i~l~n--~ 85 (102)
T 1s3a_A 21 EIRIHLCQRSPGSQGVRDFIEKRYVELKKANPDLPILIR---EC----------SDVQPKLWARYAFGQETNVPLNN--F 85 (102)
T ss_dssp EEEEECCSSSCCCHHHHHHHHHTHHHHHHHSTTCCEEEE---CC----------CSSSCEEEEEESSCCEEEEECTT--C
T ss_pred EEEEEEcCCCCCchhHHHHHHHhhHHHHHHCCCceEEEE---EC----------CCCCCEEEEEECCCCEEEEECCC--C
Confidence 46677889999999888877664433332 34665422 21 0247887765 566655666554 8
Q ss_pred CHHHHHHHHHHh
Q 022560 283 DVDSLMAFVDAL 294 (295)
Q Consensus 283 ~~e~l~~fi~~l 294 (295)
+.++|.+.|+.+
T Consensus 86 s~~eI~~~l~~l 97 (102)
T 1s3a_A 86 SADQVTRALENV 97 (102)
T ss_dssp CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHH
Confidence 999999998875
No 370
>3tqi_A GMP synthase [glutamine-hydrolyzing]; ligase; 2.84A {Coxiella burnetii}
Probab=41.32 E-value=9.3 Score=36.34 Aligned_cols=36 Identities=8% Similarity=0.218 Sum_probs=29.6
Q ss_pred EEEEeeCCCCCHHHHHHHHHHCCCCCCccccCCccc
Q 022560 82 LVKWNPVANVKGNDIWNFLRTMDVPINSLHSQGYIS 117 (295)
Q Consensus 82 ~~~~~Pi~~W~~~dvw~y~~~~~~p~~~ly~~g~~s 117 (295)
+--++||++++..||.+|.+++|||++-.+++-|+.
T Consensus 372 ~~iirPL~~l~K~EIr~~a~~lGlp~~~v~~~P~p~ 407 (527)
T 3tqi_A 372 LKLIEPLRELFKDEVRKLGLELGLPADLIYRHPFPG 407 (527)
T ss_dssp -CEECTTTTCCHHHHHHHHHHHTCCHHHHTCCCCCT
T ss_pred CccccchhcCCHHHHHHHHHHcCCChhhhccCCCCC
Confidence 347899999999999999999999996666665543
No 371
>1v85_A Similar to ring finger protein 36; apoptosis, neuron, cell death, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}
Probab=39.25 E-value=12 Score=26.52 Aligned_cols=24 Identities=13% Similarity=0.209 Sum_probs=20.6
Q ss_pred EEEEeeCCCCCHHHHHHHHHHCCC
Q 022560 82 LVKWNPVANVKGNDIWNFLRTMDV 105 (295)
Q Consensus 82 ~~~~~Pi~~W~~~dvw~y~~~~~~ 105 (295)
.+.-.|+..|+.+||-.++...++
T Consensus 11 ~~~~~~v~~Wt~~dV~~WL~~~gl 34 (91)
T 1v85_A 11 LLVHKAVDKWTTEEVVLWLEQLGP 34 (91)
T ss_dssp HHHHSCGGGCCHHHHHHHHHHHCG
T ss_pred cCCCCCcccCCHHHHHHHHHHcCC
Confidence 345578999999999999999877
No 372
>2a2p_A Selenoprotein M, SELM protein; redox enzyme, oxidoreductase; NMR {Mus musculus} SCOP: c.47.1.23
Probab=39.18 E-value=33 Score=26.12 Aligned_cols=34 Identities=15% Similarity=0.307 Sum_probs=24.8
Q ss_pred CCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHH
Q 022560 260 SFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDA 293 (295)
Q Consensus 260 ~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~ 293 (295)
.-|++++|+..++......-...+.++|.+||++
T Consensus 55 a~P~LvL~D~~G~e~E~I~Iekw~~d~I~efL~e 88 (129)
T 2a2p_A 55 ADPELVLLSRNYQELERIPLSQMTRDEINALVQE 88 (129)
T ss_dssp CCCEEEEECSSSCCCEEEECSSSCHHHHHHHHHH
T ss_pred CCCEEEEecCCCCEEEEeecccCCHHHHHHHHHH
Confidence 5799999976554333333346899999999986
No 373
>3rpp_A Glutathione S-transferase kappa 1; glutathione transferase, kappa GST, TRX domain, GSH binding, detoxification, APO form; 1.80A {Homo sapiens} PDB: 3rpn_A 1yzx_A*
Probab=38.76 E-value=28 Score=28.97 Aligned_cols=41 Identities=10% Similarity=0.030 Sum_probs=29.3
Q ss_pred HHHHHHhcCCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHH
Q 022560 249 KEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDA 293 (295)
Q Consensus 249 ~~l~~~~~~V~~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~ 293 (295)
...+ .+++|.++||+++=.+|+ ...+.| ....+.|.++|.+
T Consensus 172 ~~~a-~~~Gv~GvPtfvv~~~g~--~~~f~G-~drl~~l~~~L~~ 212 (234)
T 3rpp_A 172 TEAA-CRYGAFGLPITVAHVDGQ--THMLFG-SDRMELLAHLLGE 212 (234)
T ss_dssp HHHH-HHTTCSSSCEEEEEETTE--EEEEES-SSCHHHHHHHHTC
T ss_pred HHHH-HHcCCCCCCEEEEeCCCC--cCceeC-ccCHHHHHHHhcc
Confidence 4556 678999999998722554 345666 6788888888753
No 374
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=38.40 E-value=47 Score=26.55 Aligned_cols=35 Identities=9% Similarity=0.081 Sum_probs=27.8
Q ss_pred EEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEE
Q 022560 206 WLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGK 241 (295)
Q Consensus 206 vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~ 241 (295)
.|..|+-.-||.|....+.+.++.+.+.- .|.+--
T Consensus 2 ~I~~~~D~~CP~cy~~~~~l~~~~~~~~~-~v~~~p 36 (203)
T 2imf_A 2 IVDFYFDFLSPFSYLANQRLSKLAQDYGL-TIRYNA 36 (203)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHHCC-EEEEEE
T ss_pred eEEEEEeCCCHHHHHHHHHHHHHHHHcCC-eEEEEe
Confidence 46788899999999999999999998853 344433
No 375
>2r4v_A XAP121, chloride intracellular channel protein 2; chloride intracellular channels, CLIC2, pore-forming protein ryanodine receptor, chloride channel; HET: GSH; 1.85A {Homo sapiens} PDB: 2r5g_A 2per_A*
Probab=36.95 E-value=1.1e+02 Score=24.93 Aligned_cols=67 Identities=15% Similarity=0.129 Sum_probs=35.3
Q ss_pred ECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHH
Q 022560 211 YAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAF 290 (295)
Q Consensus 211 ya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~f 290 (295)
+.++|+.|+...-.+... +-.+....||.......+. +......+|++. .+|. .+ .+...|..+
T Consensus 26 ~~~~sp~~~rv~~~L~~~-----gi~ye~~~v~~~~~~~~~~-~~nP~g~vP~L~--~~g~--~l------~ES~aI~~Y 89 (247)
T 2r4v_A 26 SIGNCPFCQRLFMILWLK-----GVKFNVTTVDMTRKPEELK-DLAPGTNPPFLV--YNKE--LK------TDFIKIEEF 89 (247)
T ss_dssp SBCSCHHHHHHHHHHHHH-----TCCCEEEEECCC-----------CCSSSCEEE--ETTE--EE------CCHHHHHHH
T ss_pred cCCCChhHHHHHHHHHHc-----CCCcEEEEcCcccchHHHH-HhCCCCCCCEEE--ECCE--ec------cCHHHHHHH
Confidence 689999999877555442 3235566666543213444 444566899887 3443 11 234566666
Q ss_pred HHH
Q 022560 291 VDA 293 (295)
Q Consensus 291 i~~ 293 (295)
|.+
T Consensus 90 L~~ 92 (247)
T 2r4v_A 90 LEQ 92 (247)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 376
>1r4w_A Glutathione S-transferase, mitochondrial; glutathione transferase, kappa GST, RGSTK1-1; HET: GSH; 2.50A {Rattus norvegicus} SCOP: c.47.1.13
Probab=36.50 E-value=32 Score=28.17 Aligned_cols=41 Identities=12% Similarity=0.024 Sum_probs=28.2
Q ss_pred HHHHHHhcCCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHH
Q 022560 249 KEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDA 293 (295)
Q Consensus 249 ~~l~~~~~~V~~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~fi~~ 293 (295)
...+ .+++|.++||+++=.+|+ -..+.| ....+.|.++|.+
T Consensus 172 ~~~a-~~~gv~G~Ptfvv~~~g~--~~~~~G-~~~~~~l~~~l~~ 212 (226)
T 1r4w_A 172 TGAA-CKYGAFGLPTTVAHVDGK--TYMLFG-SDRMELLAYLLGE 212 (226)
T ss_dssp HHHH-HHTTCCSSCEEEEEETTE--EEEEES-TTCHHHHHHHHTC
T ss_pred HHHH-HHCCCCCCCEEEEeCCCC--cCceeC-CCcHHHHHHHhcC
Confidence 4556 789999999997644442 234456 6778888888753
No 377
>3bs5_B Connector enhancer of kinase suppressor of RAS 2; sterIle alpha motif, SAM domain, SAM domain dimer, SAM domain complex, cytoplasm, membrane; 2.00A {Homo sapiens}
Probab=36.35 E-value=17 Score=24.74 Aligned_cols=19 Identities=16% Similarity=0.522 Sum_probs=16.7
Q ss_pred eeCCCCCHHHHHHHHHHCC
Q 022560 86 NPVANVKGNDIWNFLRTMD 104 (295)
Q Consensus 86 ~Pi~~W~~~dvw~y~~~~~ 104 (295)
.|+..||.+||-.|+...+
T Consensus 2 ~~v~~Ws~~~V~~WL~~l~ 20 (80)
T 3bs5_B 2 EPVSKWSPSQVVDWMKGLD 20 (80)
T ss_dssp CCGGGCCHHHHHHHHHTSC
T ss_pred CccccCCHHHHHHHHHHHh
Confidence 5899999999999999653
No 378
>2ahe_A Chloride intracellular channel protein 4; glutathione-S-transferase superfamily, CLIC4, NCC27, chloride ION channel, metal transport; 1.80A {Homo sapiens} PDB: 2d2z_A
Probab=35.46 E-value=1.8e+02 Score=24.18 Aligned_cols=67 Identities=16% Similarity=0.127 Sum_probs=41.0
Q ss_pred ECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHH
Q 022560 211 YAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAF 290 (295)
Q Consensus 211 ya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~Pti~~~~~g~~~~~~~~gg~~~~e~l~~f 290 (295)
..++|+.|+...-.+.+. +-.+....||.......+. +......+|++.. +|. .+ .+...|..+
T Consensus 31 ~~~~~p~~~rv~~~L~~~-----gi~ye~~~v~~~~~~~~~~-~~nP~gkVPvL~~--~g~--~l------~ES~aI~~Y 94 (267)
T 2ahe_A 31 SIGNCPFSQRLFMILWLK-----GVVFSVTTVDLKRKPADLQ-NLAPGTHPPFITF--NSE--VK------TDVNKIEEF 94 (267)
T ss_dssp SBCSCHHHHHHHHHHHHH-----TCCCEEEEECTTSCCHHHH-HHSTTCCSCEEEE--TTE--EE------CCHHHHHHH
T ss_pred CCCCCchHHHHHHHHHHc-----CCCCEEEEeCcccChHHHH-HhCCCCCCCEEEE--CCE--Ee------cCHHHHHHH
Confidence 578999999776555442 3235666777654325565 5556778998873 442 11 244566666
Q ss_pred HHH
Q 022560 291 VDA 293 (295)
Q Consensus 291 i~~ 293 (295)
|.+
T Consensus 95 L~~ 97 (267)
T 2ahe_A 95 LEE 97 (267)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 379
>4hoj_A REGF protein; GST, glutathione S-transferase, enzyme function initiative, structural genomics, transferase; HET: GSH; 1.40A {Neisseria gonorrhoeae}
Probab=34.56 E-value=92 Score=24.58 Aligned_cols=53 Identities=11% Similarity=0.184 Sum_probs=35.6
Q ss_pred EEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCCCeEE
Q 022560 207 LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTIL 265 (295)
Q Consensus 207 vV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~Pti~ 265 (295)
+..|+++.||.|++..=.+.+. +-.+.+..||..+....+. +......+|++.
T Consensus 4 m~LY~~~~sP~~~rvr~~L~e~-----gi~~e~~~v~~~~~~~~~~-~~nP~g~vPvL~ 56 (210)
T 4hoj_A 4 MTLYSGITCPFSHRCRFVLYEK-----GMDFEIKDIDIYNKPEDLA-VMNPYNQVPVLV 56 (210)
T ss_dssp CEEEECTTCHHHHHHHHHHHHH-----TCCCEEEECCTTSCCHHHH-HHCTTCCSCEEE
T ss_pred EEEecCCCChHHHHHHHHHHHc-----CCCCEEEEeCCCCCCHHHH-HHCCCCCCcEEE
Confidence 4567889999999876554432 3245667777765534555 555677899986
No 380
>3lyp_A Stringent starvation protein A; structural genomics, GST-superfamily, SSPA, stringent starva protein A homolog, PSI-2; 1.60A {Pseudomonas fluorescens} PDB: 3mdk_A
Probab=33.49 E-value=1.4e+02 Score=23.41 Aligned_cols=53 Identities=17% Similarity=0.237 Sum_probs=33.9
Q ss_pred EEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCCCeEE
Q 022560 207 LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTIL 265 (295)
Q Consensus 207 vV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~Pti~ 265 (295)
+..|+.+.|+.|....=.+... +-.+....||......++. +......+|++.
T Consensus 9 ~~Ly~~~~s~~~~~v~~~L~~~-----gi~~e~~~v~~~~~~~~~~-~~~P~g~vP~L~ 61 (215)
T 3lyp_A 9 LACYSDPADHYSHRVRIVLAEK-----GVSAEIISVEAGRQPPKLI-EVNPYGSLPTLV 61 (215)
T ss_dssp CEEEECTTCHHHHHHHHHHHHH-----TCCCEEEECC---CCHHHH-HHCTTCCSSEEE
T ss_pred eEEEeCCCCchHHHHHHHHHHC-----CCCcEEEecCcccccHHHH-HHCCCCCcCeEE
Confidence 5678899999999877555443 3235555555554335666 666778899986
No 381
>2e8o_A SAM domain and HD domain-containing protein 1; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=33.10 E-value=15 Score=26.62 Aligned_cols=33 Identities=9% Similarity=0.005 Sum_probs=24.0
Q ss_pred EEeeCCCCCHHHHHHHHHHCCCCCCccccCCccc
Q 022560 84 KWNPVANVKGNDIWNFLRTMDVPINSLHSQGYIS 117 (295)
Q Consensus 84 ~~~Pi~~W~~~dvw~y~~~~~~p~~~ly~~g~~s 117 (295)
--.++..|+.+||-.|+...|+.- +-|..-|..
T Consensus 23 ~~~~v~~Ws~~~V~~WL~~lgl~~-~~y~~~F~~ 55 (103)
T 2e8o_A 23 LHPDYKTWGPEQVCSFLRRGGFEE-PVLLKNIRE 55 (103)
T ss_dssp CCSCGGGCHHHHHHHHHHHHTCCC-HHHHHHHHH
T ss_pred cccChhhCCHHHHHHHHHHcCCCh-HHHHHHHHH
Confidence 357899999999999999988752 224444443
No 382
>3bs5_A Protein aveugle; sterIle alpha motif, SAM domain, SAM domain dimer, SAM domain complex, cytoplasm, membrane; 2.00A {Drosophila melanogaster}
Probab=33.05 E-value=14 Score=27.13 Aligned_cols=33 Identities=12% Similarity=0.081 Sum_probs=23.3
Q ss_pred EEEEeeCCCCCHHHHHHHHHHC--CCCCCccccCCccc
Q 022560 82 LVKWNPVANVKGNDIWNFLRTM--DVPINSLHSQGYIS 117 (295)
Q Consensus 82 ~~~~~Pi~~W~~~dvw~y~~~~--~~p~~~ly~~g~~s 117 (295)
...-.|+..|+.+||-.|+... ++ +-|..-|..
T Consensus 17 ~~~~~~v~~Wt~~~V~~WL~~~~~gl---~~Y~~~F~~ 51 (106)
T 3bs5_A 17 TTRPKAVYLWTVSDVLKWYRRHCGEY---TQYEQLFAQ 51 (106)
T ss_dssp ---CCCGGGCCHHHHHHHHHHHSGGG---GGGHHHHHH
T ss_pred cCCCCCcccCCHHHHHHHHHHHHcch---HHHHHHHHH
Confidence 4556799999999999999987 53 346555554
No 383
>2der_A TRNA-specific 2-thiouridylase MNMA; protein-RNA complex, transferase/RNA complex; 3.10A {Escherichia coli} PDB: 2det_A 2deu_A*
Probab=30.85 E-value=27 Score=31.59 Aligned_cols=79 Identities=11% Similarity=0.142 Sum_probs=44.0
Q ss_pred hhcchhchHHHHHHHhc-C--CEEEEeeeccCCC-cccCCCCcee-cCCcc-ccc-cCCCC--C-EEEEeeCCCCCHHHH
Q 022560 27 ECCRVRKVRPLRRALKG-L--RAWITGQRKDQSP-GTRSEIPVVQ-VDPVF-EGL-EGGVG--S-LVKWNPVANVKGNDI 96 (295)
Q Consensus 27 ~c~~~~K~~pl~~~l~~-~--~~~~~G~R~~es~-~~R~~~~~~~-~~~~~-~~~-~~~~~--~-~~~~~Pi~~W~~~dv 96 (295)
.|+...|-..|.+...+ + +.+++|--.++.. ..|. ..+. .+..- +.. -.+-+ . .-.++||.+++..+|
T Consensus 113 ~Cnr~ik~~~l~~~A~~~~Gad~IatGH~a~d~~~~~~~--~l~rg~~~~kdqsy~L~~l~~~~l~~~i~PL~~~~K~eV 190 (380)
T 2der_A 113 LCNKEIKFKAFLEFAAEDLGADYIATGHYVRRADVDGKS--RLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQV 190 (380)
T ss_dssp HHHHHTTTTHHHHHHHHTTCCSEEECCCSCEEEEETTEE--EEECCSSTTTCCGGGGSSCCHHHHHHEECCGGGSCHHHH
T ss_pred HHHHHHHHHHHHHHHHhhcCCCEEEEccccccccccchH--HHhcccccccccceeecCCChhhcceeEccCCCCCHHHH
Confidence 36666676677665544 4 5889997555421 0111 0000 01000 000 00000 1 347999999999999
Q ss_pred HHHHHHCCCCC
Q 022560 97 WNFLRTMDVPI 107 (295)
Q Consensus 97 w~y~~~~~~p~ 107 (295)
.+|.++++||+
T Consensus 191 r~~A~~~Gl~~ 201 (380)
T 2der_A 191 RKIAEDLGLVT 201 (380)
T ss_dssp HHHHHHTTCC-
T ss_pred HHHHHHcCCCC
Confidence 99999999996
No 384
>1pk1_B Sex COMB on midleg CG9495-PA; hetero SAM domain, polymers, transcriptional repression, transcription repression; 1.80A {Drosophila melanogaster} SCOP: a.60.1.2 PDB: 1pk3_A
Probab=30.51 E-value=24 Score=24.94 Aligned_cols=19 Identities=5% Similarity=0.198 Sum_probs=15.9
Q ss_pred eeCCCCCHHHHHHHHHHCC
Q 022560 86 NPVANVKGNDIWNFLRTMD 104 (295)
Q Consensus 86 ~Pi~~W~~~dvw~y~~~~~ 104 (295)
.++..||.+||..||+..+
T Consensus 12 ~~v~~WsvedV~~wl~~~~ 30 (89)
T 1pk1_B 12 SQPIDWTIEEVIQYIESND 30 (89)
T ss_dssp CCGGGCCHHHHHHHHHHHC
T ss_pred CCchhCCHHHHHHHHHHHc
Confidence 3456999999999999864
No 385
>2eap_A Lymphocyte cytosolic protein 2; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=30.34 E-value=14 Score=26.20 Aligned_cols=27 Identities=4% Similarity=0.078 Sum_probs=21.6
Q ss_pred EEEEeeCCCCCHHHHHHHHHHCCCCCC
Q 022560 82 LVKWNPVANVKGNDIWNFLRTMDVPIN 108 (295)
Q Consensus 82 ~~~~~Pi~~W~~~dvw~y~~~~~~p~~ 108 (295)
+..-.+++.|+.++|-+|+++.|+.-|
T Consensus 13 ~ps~seV~~Wsp~~VadWLkk~g~~~c 39 (90)
T 2eap_A 13 VPFRSEVLGWDPDSLADYFKKLNYKDC 39 (90)
T ss_dssp CCCHHHHTTCCTTTHHHHHHHTTCHHH
T ss_pred cccCccccccCHHHHHHHHHHcCCchH
Confidence 345578999999999999999876433
No 386
>3p52_A NH(3)-dependent NAD(+) synthetase; structural genomics, center for structural genomics of infec diseases, NADE, CSGI; 2.74A {Campylobacter jejuni} SCOP: c.26.2.0
Probab=30.17 E-value=32 Score=29.08 Aligned_cols=23 Identities=13% Similarity=0.528 Sum_probs=21.7
Q ss_pred EEeeCCCCCHHHHHHHHHHCCCC
Q 022560 84 KWNPVANVKGNDIWNFLRTMDVP 106 (295)
Q Consensus 84 ~~~Pi~~W~~~dvw~y~~~~~~p 106 (295)
-++||.+.+..+|.++.+..|||
T Consensus 153 ~i~PL~~l~K~eV~~la~~~gip 175 (249)
T 3p52_A 153 AFNPIGSLYKSEIYALAKYLNLH 175 (249)
T ss_dssp SEETTTTSCHHHHHHHHHHTTCC
T ss_pred ccccccCCcHHHHHHHHHHcCCc
Confidence 58999999999999999999988
No 387
>1yy7_A SSPA, stringent starvation protein A; GST fold, transcription; HET: CIT; 2.02A {Yersinia pestis}
Probab=29.69 E-value=1.9e+02 Score=22.61 Aligned_cols=54 Identities=17% Similarity=0.254 Sum_probs=35.6
Q ss_pred EEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCCCeEE
Q 022560 206 WLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTIL 265 (295)
Q Consensus 206 vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~Pti~ 265 (295)
.+..|+.+.|+.|....-.+.. .+-.+....+|.+...+++. +......+|++.
T Consensus 10 ~~~Ly~~~~s~~~~~v~~~L~~-----~gi~~e~~~v~~~~~~~~~~-~~~P~g~vP~L~ 63 (213)
T 1yy7_A 10 VMTLFSGPTDIFSHQVRIVLAE-----KGVSVEIEQVEADNLPQDLI-DLNPYRTVPTLV 63 (213)
T ss_dssp SEEEEECTTCHHHHHHHHHHHH-----HTCCEEEEECCTTSCCHHHH-HHCTTCCSSEEE
T ss_pred ceEEEcCCCChhHHHHHHHHHH-----cCCCCeEEeCCcccCcHHHH-HHCCCCCCCEEE
Confidence 4778889999999887654443 23235556666544335665 555667899987
No 388
>1k0m_A CLIC1, NCC27, chloride intracellular channel protein 1; glutathione-S-tranferase superfamily, chloride ION channel, metal transport; 1.40A {Homo sapiens} SCOP: a.45.1.1 c.47.1.5 PDB: 1k0n_A* 1k0o_A 1rk4_A 3uvh_A 3o3t_A 3p90_A 3qr6_A 3p8w_A 3tgz_A 3ma4_A 3swl_A
Probab=29.19 E-value=1.7e+02 Score=23.70 Aligned_cols=47 Identities=17% Similarity=0.174 Sum_probs=31.1
Q ss_pred CCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCCCeEE
Q 022560 213 PWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTIL 265 (295)
Q Consensus 213 ~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~Pti~ 265 (295)
..|++|+...-.+.. .+-.+....||......++. +......+|++.
T Consensus 22 ~~sp~~~rv~~~L~~-----~gi~ye~~~v~~~~~~~~~~-~~nP~g~VPvL~ 68 (241)
T 1k0m_A 22 GNCPFSQRLFMVLWL-----KGVTFNVTTVDTKRRTETVQ-KLCPGGELPFLL 68 (241)
T ss_dssp CSCHHHHHHHHHHHH-----HTCCCEEEEECTTSCCHHHH-HHCTTCCSSEEE
T ss_pred CCCHHHHHHHHHHHH-----cCCccEEEEcCCcccHHHHH-HhCCCCCCCEEE
Confidence 389999987655544 23246667777654335666 566677899986
No 389
>3ir4_A Glutaredoxin 2; glutathione, IDP00895, structural genomics, for structural genomics of infectious diseases, csgid, oxidoreductase; HET: MSE GSH; 1.20A {Salmonella enterica subsp} PDB: 1g7o_A
Probab=28.30 E-value=64 Score=25.72 Aligned_cols=52 Identities=12% Similarity=0.211 Sum_probs=35.1
Q ss_pred EEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCCCeEE
Q 022560 207 LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTIL 265 (295)
Q Consensus 207 vV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~Pti~ 265 (295)
+..|+.+.|+.|....-.+.+. +-.+....||..+. .... +......+|++.
T Consensus 4 ~~Ly~~~~sp~~~~v~~~l~~~-----gi~~~~~~v~~~~~-~~~~-~~~p~~~vP~l~ 55 (218)
T 3ir4_A 4 MKLYIYDHCPFCVKARMIFGLK-----NIPVELNVLQNDDE-ATPT-RMIGQKMVPILQ 55 (218)
T ss_dssp CEEEECTTCHHHHHHHHHHHHH-----TCCCEEEECCTTCC-HHHH-HHHSSSCSCEEE
T ss_pred EEEEcCCCCchHHHHHHHHHHc-----CCceEEEECCCcch-hhhh-hcCCCceeeeEE
Confidence 4578899999999877555443 32466667776655 4444 455677899886
No 390
>2f3n_A SH3 and multiple ankyrin repeat domains 3; postsynaptic density, SAM domain, shank, scaffolding protein, structural protein; 2.10A {Rattus norvegicus} SCOP: a.60.1.2 PDB: 2f44_A
Probab=27.71 E-value=32 Score=23.25 Aligned_cols=27 Identities=11% Similarity=0.203 Sum_probs=20.9
Q ss_pred CCCCCHHHHHHHHHHCCCCCCccccCCccc
Q 022560 88 VANVKGNDIWNFLRTMDVPINSLHSQGYIS 117 (295)
Q Consensus 88 i~~W~~~dvw~y~~~~~~p~~~ly~~g~~s 117 (295)
+..||.+||-+++...|++ -|..-|..
T Consensus 2 v~~Ws~~~V~~WL~~lgl~---~Y~~~F~~ 28 (76)
T 2f3n_A 2 LQLWSKFDVGDWLESIHLG---EHRDRFED 28 (76)
T ss_dssp GGGCCHHHHHHHHHHTTCG---GGHHHHHH
T ss_pred hhhCCHHHHHHHHHHCCCH---HHHHHHHH
Confidence 5689999999999998875 35555554
No 391
>1v32_A AT5G08430, hypothetical protein RAFL09-47-K03; SWI/SNF complex subunit, structural genomics; NMR {Arabidopsis thaliana} SCOP: a.42.1.1
Probab=25.66 E-value=23 Score=25.77 Aligned_cols=13 Identities=8% Similarity=0.227 Sum_probs=10.6
Q ss_pred HHHHHHHHHCCCC
Q 022560 94 NDIWNFLRTMDVP 106 (295)
Q Consensus 94 ~dvw~y~~~~~~p 106 (295)
..||+||+.++|-
T Consensus 42 k~lW~YIK~nnLQ 54 (101)
T 1v32_A 42 DTIAKYISKEGLL 54 (101)
T ss_dssp HHHHHHHHHHTCB
T ss_pred HHHHHHHHhhcCc
Confidence 3499999998874
No 392
>4f03_A Glutathione transferase; GST fold; 1.80A {Phanerochaete chrysosporium} PDB: 4g19_A*
Probab=25.27 E-value=65 Score=26.14 Aligned_cols=31 Identities=13% Similarity=0.085 Sum_probs=20.1
Q ss_pred CCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCC
Q 022560 212 APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD 247 (295)
Q Consensus 212 a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~ 247 (295)
.+|||+|.+.+=.|. +++-.+..+.||..+.
T Consensus 19 ~~~SP~~~kvr~~L~-----~kgi~y~~~~v~~~~~ 49 (253)
T 4f03_A 19 SPWSPNTWKIRYALN-----YKGLKYKTEWVEYPDI 49 (253)
T ss_dssp CCCCHHHHHHHHHHH-----HHTCCEEEEECCGGGH
T ss_pred CCcChhHHHHHHHHH-----HcCCCCEEEEEccccc
Confidence 789999998775553 3442355566665544
No 393
>1wwv_A Connector enhancer of kinase suppressor of RAS 1; structural genomics, protein regulation, transcription; NMR {Homo sapiens} SCOP: a.60.1.2
Probab=25.07 E-value=15 Score=26.16 Aligned_cols=21 Identities=19% Similarity=0.321 Sum_probs=17.8
Q ss_pred EEEeeCCCCCHHHHHHHHHHC
Q 022560 83 VKWNPVANVKGNDIWNFLRTM 103 (295)
Q Consensus 83 ~~~~Pi~~W~~~dvw~y~~~~ 103 (295)
....|+..|+.+||-+++...
T Consensus 6 ~~~~~v~~Wt~~~V~~WL~~l 26 (91)
T 1wwv_A 6 SGMEPVETWTPGKVATWLRGL 26 (91)
T ss_dssp CSCCCTTTCCTTTHHHHHHHH
T ss_pred CCCCccccCCHHHHHHHHHhc
Confidence 345699999999999999954
No 394
>3vln_A GSTO-1, glutathione S-transferase omega-1; GST fold, reductase; HET: ASC; 1.70A {Homo sapiens} PDB: 1eem_A* 3lfl_A*
Probab=24.04 E-value=2e+02 Score=22.97 Aligned_cols=55 Identities=11% Similarity=0.094 Sum_probs=37.2
Q ss_pred EEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCCCeEEE
Q 022560 206 WLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILF 266 (295)
Q Consensus 206 vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~Pti~~ 266 (295)
.+..|+.++|+.|....=.++.. +-.+.+..||..+....+. +......+|++..
T Consensus 23 ~~~Ly~~~~sp~~~~v~~~L~~~-----gi~ye~~~v~~~~~~~~~~-~~~P~g~vP~L~~ 77 (241)
T 3vln_A 23 SIRIYSMRFSPFAERTRLVLKAK-----GIRHEVININLKNKPEWFF-KKNPFGLVPVLEN 77 (241)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHH-----TCCEEEEEBCTTSCCTTHH-HHCTTCCSCEEEC
T ss_pred eEEEEcCCCCcHHHHHHHHHHHc-----CCCCeEEecCcccCCHHHH-HhCCCCCCCEEEE
Confidence 47788999999999877666543 3245666666655423455 5566778998854
No 395
>3lxz_A Glutathione S-transferase family protein; structural genomics, PP0183, PSI-2, protein structure initiative; 1.76A {Pseudomonas putida} PDB: 3pr8_A*
Probab=23.97 E-value=2.3e+02 Score=22.34 Aligned_cols=53 Identities=11% Similarity=0.091 Sum_probs=34.0
Q ss_pred EEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCCCeEEE
Q 022560 207 LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILF 266 (295)
Q Consensus 207 vV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~Pti~~ 266 (295)
+..++.+.|+.|....-.+.. .+-.+....|+.... +++. .......+|++..
T Consensus 3 ~~Ly~~~~sp~~~~v~~~L~~-----~gi~ye~~~v~~~~~-~~~~-~~~P~g~vP~L~~ 55 (229)
T 3lxz_A 3 LKLYGFSVSNYYNMVKLALLE-----KGLTFEEVTFYGGQA-PQAL-EVSPRGKVPVLET 55 (229)
T ss_dssp EEEEECTTCHHHHHHHHHHHH-----TTCCEEEEECCCCSC-HHHH-TTSTTSCSCEEEE
T ss_pred EEEEeCCCCchHHHHHHHHHH-----cCCCCEEEecCCCCC-HHHH-hhCCCCCcCeEEe
Confidence 667889999999876655443 332344444543434 6666 5556678998864
No 396
>1uhr_A SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily...; structural genomics, chromatin remodeling; NMR {Mus musculus} SCOP: a.42.1.1
Probab=23.94 E-value=36 Score=24.19 Aligned_cols=13 Identities=15% Similarity=0.820 Sum_probs=10.9
Q ss_pred HHHHHHHHHCCCC
Q 022560 94 NDIWNFLRTMDVP 106 (295)
Q Consensus 94 ~dvw~y~~~~~~p 106 (295)
..||+||+.++|-
T Consensus 34 k~lW~YIK~n~Lq 46 (93)
T 1uhr_A 34 QALWQYIKTHKLQ 46 (93)
T ss_dssp HHHHHHHHHTTCB
T ss_pred HHHHHHHHhccCC
Confidence 4689999998875
No 397
>1v31_A Hypothetical protein RAFL11-05-P19; SWI/SNF complex subunit, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: a.42.1.1
Probab=23.80 E-value=37 Score=24.15 Aligned_cols=13 Identities=15% Similarity=0.754 Sum_probs=10.8
Q ss_pred HHHHHHHHHCCCC
Q 022560 94 NDIWNFLRTMDVP 106 (295)
Q Consensus 94 ~dvw~y~~~~~~p 106 (295)
..||+||+.++|-
T Consensus 34 k~lW~YIK~n~Lq 46 (93)
T 1v31_A 34 AAIWHYVKARKLQ 46 (93)
T ss_dssp HHHHHHHHHTTCB
T ss_pred HHHHHHHHHccCc
Confidence 4689999998864
No 398
>3fiu_A NH(3)-dependent NAD(+) synthetase; rossman fold, adenine nucleotide alpha hydrolase-like, ATP- binding, ligase, nucleotide-binding; HET: AMP; 1.85A {Francisella tularensis subsp}
Probab=23.45 E-value=43 Score=28.27 Aligned_cols=23 Identities=26% Similarity=0.569 Sum_probs=21.8
Q ss_pred EEeeCCCCCHHHHHHHHHHCCCC
Q 022560 84 KWNPVANVKGNDIWNFLRTMDVP 106 (295)
Q Consensus 84 ~~~Pi~~W~~~dvw~y~~~~~~p 106 (295)
-++||.+.+-.||.++.+..|||
T Consensus 162 ~i~PL~~l~K~eVr~lA~~lglp 184 (249)
T 3fiu_A 162 DILPLVNLKKSQVFELGKYLDVP 184 (249)
T ss_dssp SBCTTTTCCHHHHHHHHHHTTCC
T ss_pred ceeecccCcHHHHHHHHHHcCCc
Confidence 78999999999999999999977
No 399
>1z9h_A Membrane-associated prostaglandin E synthase-2; membran associated protein, indomethacin, isomerase; HET: IMN; 2.60A {Macaca fascicularis} SCOP: a.45.1.1 c.47.1.5 PDB: 2pbj_A*
Probab=23.37 E-value=1.3e+02 Score=25.42 Aligned_cols=53 Identities=11% Similarity=0.110 Sum_probs=31.5
Q ss_pred CcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcC--CCcHHHHHHhcCCCCCCeEEE
Q 022560 204 EPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD--GDQKEYAKQKLQLGSFPTILF 266 (295)
Q Consensus 204 k~vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~--~~~~~l~~~~~~V~~~Pti~~ 266 (295)
...+..|+.++|+.|+...-.+.+. + +.+-.++++ .. .++ +......+|++..
T Consensus 12 ~~~~~Ly~~~~sp~~~~v~~~L~~~-----g--i~~~~~~v~~~~~-~~~--~~~p~~~vP~l~~ 66 (290)
T 1z9h_A 12 RLQLTLYQYKTCPFCSKVRAFLDFH-----A--LPYQVVEVNPVLR-AEI--KFSSYRKVPILVA 66 (290)
T ss_dssp -CEEEEEECTTCHHHHHHHHHHHHT-----T--CCEEEEECCTTTC-GGG--TTCSCCSSCEEEE
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHc-----C--CCeEEEECChhhH-HHH--HHcCCCCCCEEEE
Confidence 3457788899999998776555442 3 444444443 22 222 3345568998865
No 400
>2c5s_A THII, probable thiamine biosynthesis protein THII; RNA-binding protein, RNA binding protein, tRNA modification, 4-thiouridine synthase; HET: AMP; 2.5A {Bacillus anthracis} SCOP: c.26.2.6 d.308.1.1
Probab=23.11 E-value=34 Score=31.28 Aligned_cols=54 Identities=13% Similarity=0.130 Sum_probs=35.0
Q ss_pred CCEEEEeeeccCCCcccCCCCceecCCccccccCCCCCEEEEeeCCCCCHHHHHHHHHHCCCC
Q 022560 44 LRAWITGQRKDQSPGTRSEIPVVQVDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVP 106 (295)
Q Consensus 44 ~~~~~~G~R~~es~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~W~~~dvw~y~~~~~~p 106 (295)
..++++|.-.+|. .+.....+...... .+.--++||+.++..||.+|.++.|++
T Consensus 291 ~~~I~tG~~~dD~-ae~~l~~l~~~~~~--------~~~~virPL~~l~K~eI~~~a~~~Gl~ 344 (413)
T 2c5s_A 291 ALAITTGESLGQV-ASQTLDSMHTINEV--------TNYPVIRPLITMDKLEIIKIAEEIGTY 344 (413)
T ss_dssp CCEEECCCCSSST-TSCCHHHHHHHGGG--------CCSCEECTTTTCCHHHHHHHHHHTTCH
T ss_pred CCEEEEcccchhh-HHHHHHHHhccccc--------CCCEEEeccCCCCHHHHHHHHHHcCCC
Confidence 3479999887774 22111111111110 123478999999999999999999984
No 401
>3rbt_A Glutathione transferase O1; glutathione S-transferase omega3; 2.20A {Bombyx mori}
Probab=22.29 E-value=2.4e+02 Score=22.82 Aligned_cols=55 Identities=7% Similarity=-0.096 Sum_probs=37.7
Q ss_pred EEEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCCCeEEE
Q 022560 206 WLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILF 266 (295)
Q Consensus 206 vvV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~Pti~~ 266 (295)
.+..++.++|+.|....=.+.. .+-.+.+..||..+...++. +......+|++..
T Consensus 26 ~~~Ly~~~~sp~~~~v~~~L~~-----~gi~ye~~~v~~~~~~~~~~-~~nP~g~vP~L~~ 80 (246)
T 3rbt_A 26 KLRLYHVDMNPYGHRVLLVLEA-----KRIKYEVYRLDPLRLPEWFR-AKNPRLKIPVLEI 80 (246)
T ss_dssp SEEEEECTTCHHHHHHHHHHHH-----TTBCEEEEECCSSSCCHHHH-HHCTTCBSCEEEE
T ss_pred ceEEEecCCCccHHHHHHHHHH-----cCCCceEEEeCcccCCHHHH-HhCCCCCCCEEEe
Confidence 5678899999999887655544 23245666677665534566 6667788999865
No 402
>2l5y_A Stromal interaction molecule 2; EF-hand, SAM domain, store OPE calcium entry, signaling protein; NMR {Homo sapiens}
Probab=21.67 E-value=24 Score=27.65 Aligned_cols=31 Identities=19% Similarity=0.266 Sum_probs=23.6
Q ss_pred EEeeCCCCCHHHHHHHHHHC-CCCCCccccCCccc
Q 022560 84 KWNPVANVKGNDIWNFLRTM-DVPINSLHSQGYIS 117 (295)
Q Consensus 84 ~~~Pi~~W~~~dvw~y~~~~-~~p~~~ly~~g~~s 117 (295)
+-.|+.+||.+||-.+|... ++|- |..=|+.
T Consensus 74 ~~s~V~nWTvedV~~WL~~~v~Lpq---Y~~~Fr~ 105 (150)
T 2l5y_A 74 KTSEVHNWTLEDTLQWLIEFVELPQ---YEKNFRD 105 (150)
T ss_dssp HTSHHHHCCHHHHHHHHHHHTCCTT---SHHHHHH
T ss_pred ccCcchhCCHHHHHHHHHHcCCcHH---HHHHHHH
Confidence 44689999999999999884 5544 7665655
No 403
>1hmj_A RPB5, protein (subunit H); RNA polymerase, archaea; NMR {Methanocaldococcus jannaschii} SCOP: d.78.1.1
Probab=21.07 E-value=1.5e+02 Score=20.36 Aligned_cols=51 Identities=14% Similarity=0.154 Sum_probs=37.9
Q ss_pred CHHHHHHHHHhcCCCCccccChhhhcchhchHHHHHHHhcCC-EEEEeeeccCCCcccC
Q 022560 4 DAVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLR-AWITGQRKDQSPGTRS 61 (295)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~c~~~~K~~pl~~~l~~~~-~~~~G~R~~es~~~R~ 61 (295)
+.++.+++.++|++. ..+...+.+..|+.+++.... -++-=+|.++. ..|.
T Consensus 16 s~eEk~~lL~~y~i~------~~qLPrI~~~DPvar~~G~k~GdVvkI~R~S~t-aG~~ 67 (78)
T 1hmj_A 16 PKEEVEEILKRYNIK------IQQLPKIYEDDPVIQEIGAKEGDVVRVIRKSPT-AGVS 67 (78)
T ss_pred CHHHHHHHHHHcCCC------HHHCCeeeCcCHhhHHhCCCCCCEEEEEECCCC-CCCc
Confidence 356778888999883 567889999999999988664 35555787776 3544
No 404
>3uow_A GMP synthetase; structural genomics consortium, SGC, purine nucleotide biosy process, ligase; HET: XMP; 2.72A {Plasmodium falciparum}
Probab=20.34 E-value=40 Score=32.18 Aligned_cols=36 Identities=11% Similarity=0.284 Sum_probs=30.4
Q ss_pred EEEEeeCCCCCHHHHHHHHHHCCCCCCccccCCccc
Q 022560 82 LVKWNPVANVKGNDIWNFLRTMDVPINSLHSQGYIS 117 (295)
Q Consensus 82 ~~~~~Pi~~W~~~dvw~y~~~~~~p~~~ly~~g~~s 117 (295)
+-.+.||.+++..||.++.++.|||+.-.+++=|+.
T Consensus 401 ~~li~PL~~l~K~EVr~la~~lGlp~~~~~r~P~p~ 436 (556)
T 3uow_A 401 FKLFEPFKYLFKDDVKTLSRELNLPEEITNRHPFPG 436 (556)
T ss_dssp CEEECTTTTCCHHHHHHHHHTTTCCHHHHHCCCCCT
T ss_pred cceEeecccCcHHHHHHHHHHcCCCHHHhCCCCCCC
Confidence 457899999999999999999999987777765443
No 405
>2gsq_A Squid GST, glutathione S-transferase; squid digestive gland, sigma class; HET: GBI; 2.20A {Ommastrephes sloani} SCOP: a.45.1.1 c.47.1.5 PDB: 1gsq_A*
Probab=20.08 E-value=2.9e+02 Score=21.22 Aligned_cols=53 Identities=8% Similarity=0.039 Sum_probs=33.0
Q ss_pred EEEEECCCChhHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHhcCCCCCCeEEE
Q 022560 207 LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILF 266 (295)
Q Consensus 207 vV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~V~~~Pti~~ 266 (295)
+..||.+.|+.|+...=.+.. .+-.+....++.++. +++. .......+|++..
T Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~-----~gi~~e~~~v~~~~~-~~~~-~~~P~g~vP~L~~ 55 (202)
T 2gsq_A 3 YTLHYFPLMGRAELCRFVLAA-----HGEEFTDRVVEMADW-PNLK-ATMYSNAMPVLDI 55 (202)
T ss_dssp EEEEECSSSGGGHHHHHHHHH-----TTCCCEEEECCTTTH-HHHG-GGSGGGSSCEEEE
T ss_pred cEEEEcCCCchhHHHHHHHHH-----cCCCeeEEEeCHHHH-Hhhc-ccCCCCCCCEEEE
Confidence 567888899999876644433 332355566665433 4554 4445568999873
Done!