BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022562
(295 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q2V9B0|MY1R1_SOLTU Transcription factor MYB1R1 OS=Solanum tuberosum PE=2 SV=1
Length = 297
Score = 240 bits (613), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 170/301 (56%), Positives = 209/301 (69%), Gaps = 31/301 (10%)
Query: 9 AVNGGGC--EIMLFGVRVVVDSMRKSVSLNNLSQYEQPQDNSSNCNNNNNKDDVAA--AG 64
AV GGG EIMLFGVRV VD MRKSVSLN+LSQYE P N++N +NN+ A G
Sbjct: 14 AVTGGGFGGEIMLFGVRVKVDPMRKSVSLNDLSQYEHPNANNNNNGGDNNESSKVAQDEG 73
Query: 65 YASADDGVHNNSSRASRERKRGVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQ 124
YASADD V + S+ + RERKRGVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQ
Sbjct: 74 YASADDAVQHQSN-SGRERKRGVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQ 132
Query: 125 VASHAQKYFLRRSNLNRRRRRSSLFDITTDSVAATPMEEELVDHQDHNPSQSYPLLPPTP 184
VASHAQKYFLRRSNLNRRRRRSSLFDITTDSV+ P+EE V+++ Q P++ P
Sbjct: 133 VASHAQKYFLRRSNLNRRRRRSSLFDITTDSVSVMPIEE--VENK-----QEIPVVAPAT 185
Query: 185 AETSNKSGGFSMMPAL-PVVLPVPIENPMENLTLGQNSQRTAGEATRLIRPVPVPVLPAA 243
T+ K+ F + P + P++ PV I+ E TL ++ G ++ L+ PVP+ +P
Sbjct: 186 LPTT-KTNAFPVAPTVGPIIFPVQIDKSREYPTLLRHDH---GNSSMLVGPVPMFSMP-- 239
Query: 244 QPSSTVSDLNLNLNLAVDPPPLSQ---------RESSSRHSAFQVMQTFNNGDSNSIISV 294
PS+ + DLN N N ++P LS + SS+RHSA+ VM +F+NG+ SII V
Sbjct: 240 NPSTAI-DLNANHNSTIEPSSLSLRLSLSLDQGQASSTRHSAYNVMSSFSNGE--SIIRV 296
Query: 295 A 295
A
Sbjct: 297 A 297
>sp|Q8S9H7|DIV_ANTMA Transcription factor DIVARICATA OS=Antirrhinum majus GN=DIVARICATA
PE=2 SV=1
Length = 307
Score = 123 bits (309), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 58/84 (69%), Positives = 71/84 (84%), Gaps = 1/84 (1%)
Query: 71 GVHNNSSRAS-RERKRGVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHA 129
G ++S R S +ERK+GVPWTEEEHKLFL+GL+K GKGDWR ISRNFV TRTPTQVASHA
Sbjct: 115 GRKSSSGRPSEQERKKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHA 174
Query: 130 QKYFLRRSNLNRRRRRSSLFDITT 153
QKYF+R+ + + +RR+S+ DITT
Sbjct: 175 QKYFIRQLSGGKDKRRASIHDITT 198
>sp|Q869R9|MYBJ_DICDI Myb-like protein J OS=Dictyostelium discoideum GN=mybJ PE=3 SV=1
Length = 734
Score = 72.4 bits (176), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 49/69 (71%), Gaps = 5/69 (7%)
Query: 84 KRGVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRSNLNRRR 143
K+G WT+EEH FL G+Q GKG W+ I++ FV TRTPTQ+ SHAQKY+LR+ + +
Sbjct: 376 KQG--WTKEEHIRFLNGIQIHGKGAWKEIAQ-FVGTRTPTQIQSHAQKYYLRQKQETKNK 432
Query: 144 RRSSLFDIT 152
R S+ D++
Sbjct: 433 R--SIHDLS 439
>sp|Q54HX6|MYBI_DICDI Myb-like protein I OS=Dictyostelium discoideum GN=mybI PE=3 SV=1
Length = 977
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Query: 78 RASRERKRGVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRS 137
+ S ++K+ WT EEH F+ L K G D + IS+ +V TR PTQV +HAQKYFLR
Sbjct: 164 KQSEKKKQSRYWTPEEHSRFIEALSKYGHKDVKSISQ-YVSTRNPTQVRTHAQKYFLR-- 220
Query: 138 NLNRRRRR 145
++R R R
Sbjct: 221 -IDRERGR 227
>sp|Q54Z40|MYBH_DICDI Myb-like protein H OS=Dictyostelium discoideum GN=mybH PE=3 SV=1
Length = 1217
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
Query: 64 GYASAD--DGVHNNSSRASRER---KRGVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVK 118
G S D D + N S AS PW+ EEH+LFL ++K G+G+W+ IS +K
Sbjct: 202 GIKSLDNIDQLFNQSHAASSSHNLPSHNTPWSNEEHELFLKAIEKYGRGNWKLIS-TLIK 260
Query: 119 TRTPTQVASHAQKYFLRRSNLN 140
+R Q+ +HA+ YF + S N
Sbjct: 261 SRNTLQIKNHARIYFDKISQQN 282
>sp|Q6R0H0|ASG4_ARATH Transcription factor ASG4 OS=Arabidopsis thaliana GN=ASG4 PE=2 SV=1
Length = 287
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 89 WTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLR 135
WTE+EH FL L + DW+ I + FV ++T Q+ SHAQKYFL+
Sbjct: 64 WTEQEHDKFLEALHLFDR-DWKKI-KAFVGSKTVIQIRSHAQKYFLK 108
>sp|Q54IF9|MYBG_DICDI Myb-like protein G OS=Dictyostelium discoideum GN=mybG PE=3 SV=1
Length = 423
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 89 WTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLR 135
WT+EEH+ FL L + DW+ I +FV ++T Q+ SHAQKYF++
Sbjct: 44 WTDEEHQKFLEALTLFDR-DWKKI-ESFVGSKTVIQIRSHAQKYFIK 88
>sp|Q6R0H1|LHY_ARATH Protein LHY OS=Arabidopsis thaliana GN=LHY PE=1 SV=2
Length = 645
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 37/56 (66%), Gaps = 5/56 (8%)
Query: 80 SRERKRGVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLR 135
+++R+R WTE+EH+ FL L+ G+ W+ I + + T+T Q+ SHAQK+F +
Sbjct: 21 TKQRER---WTEDEHERFLEALRLYGRA-WQRIEEH-IGTKTAVQIRSHAQKFFTK 71
>sp|P92973|CCA1_ARATH Protein CCA1 OS=Arabidopsis thaliana GN=CCA1 PE=1 SV=1
Length = 608
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 5/56 (8%)
Query: 80 SRERKRGVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLR 135
+++R+R WTEEEH F+ L+ G+ W+ I + V T+T Q+ SHAQK+F +
Sbjct: 21 TKQRER---WTEEEHNRFIEALRLYGRA-WQKIEEH-VATKTAVQIRSHAQKFFSK 71
>sp|Q86HX9|MYBK_DICDI Myb-like protein K OS=Dictyostelium discoideum GN=mybK PE=3 SV=1
Length = 894
Score = 45.1 bits (105), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 89 WTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYF 133
WT EEH FL +Q+ G D+ I++ FV+TR QV +H Y
Sbjct: 657 WTSEEHNKFLEAVQQFGIKDYHAIAK-FVQTRNHHQVRTHVNTYL 700
>sp|Q69Z66|MYSM1_MOUSE Histone H2A deubiquitinase MYSM1 OS=Mus musculus GN=Mysm1 PE=2 SV=2
Length = 819
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 87 VPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYF 133
V WT EE +LF GL K G+ W I+ +K+RT QV S+A++YF
Sbjct: 116 VKWTVEEKELFEQGLAKFGRR-WTKIA-TLLKSRTVLQVKSYARQYF 160
>sp|Q5VVJ2|MYSM1_HUMAN Histone H2A deubiquitinase MYSM1 OS=Homo sapiens GN=MYSM1 PE=1 SV=1
Length = 828
Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 87 VPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYF 133
V WT EE +LF GL K G+ W IS+ + +RT QV S+A++YF
Sbjct: 119 VKWTIEEKELFEQGLAKFGRR-WTKISK-LIGSRTVLQVKSYARQYF 163
>sp|Q5RGA4|MYSM1_DANRE Histone H2A deubiquitinase MYSM1 OS=Danio rerio GN=mysm1 PE=2 SV=2
Length = 822
Score = 41.2 bits (95), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 89 WTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYF 133
W EEE +LF GL + G+ W I++ + TRT QV S+A++YF
Sbjct: 102 WAEEEKELFEKGLAQFGRR-WTKIAK-LIGTRTVLQVKSYAKQYF 144
>sp|Q5F3F2|MYSM1_CHICK Histone H2A deubiquitinase MYSM1 OS=Gallus gallus GN=MYSM1 PE=2
SV=1
Length = 832
Score = 39.7 bits (91), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 87 VPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYF 133
+ WT EE +LF GL K G+ W I++ + +RT QV S+A++YF
Sbjct: 120 LKWTSEEKELFEQGLVKYGR-RWTKIAK-LIGSRTVLQVKSYARQYF 164
>sp|A0JMR6|MYSM1_XENLA Histone H2A deubiquitinase MYSM1 OS=Xenopus laevis GN=mysm1 PE=2
SV=1
Length = 818
Score = 38.5 bits (88), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 87 VPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRSNL 139
V WT+EE LF GL G+ W I+R + +R+ QV ++A+ YF + L
Sbjct: 110 VKWTKEEKNLFEQGLATFGRR-WTSIAR-LIGSRSVLQVKNYARHYFKNKCKL 160
>sp|Q55GK3|MYBM_DICDI Myb-like protein M OS=Dictyostelium discoideum GN=mybM PE=3 SV=1
Length = 669
Score = 37.4 bits (85), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 9/112 (8%)
Query: 29 MRKSVSLNNLSQYE-QPQDNSSNCNNNNN--KDDVAAAGY-ASADDGVHNNSSRASRERK 84
M +S+ +NN+S+Y PQ NS N+ + D+ + Y S D V + S R + +
Sbjct: 1 MTESLIMNNISKYNISPQFNSDRIYNDPSLMDDEFSDNEYDLSPKDDVPSPSKRGRGQIQ 60
Query: 85 RGV-----PWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQK 131
G+ WTEEE + + G+ W+ IS +T Q A H ++
Sbjct: 61 NGIRRSPNKWTEEEDQKLFQLVSIYGEKKWKRISAEMGGQKTGAQCAQHWKR 112
>sp|Q9LYP5|ARR21_ARATH Putative two-component response regulator ARR21 OS=Arabidopsis
thaliana GN=ARR21 PE=2 SV=3
Length = 613
Score = 37.0 bits (84), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 13/76 (17%)
Query: 68 ADDGVHNNSSRASRERKRGVPWTEEEHKLFLLGLQKVGKGDWRGISRNF-----VKTRTP 122
+DDG S + +K+ + WT+ H LFL ++ +G + + + V T
Sbjct: 210 SDDG----ESMSQPAKKKKIQWTDSLHDLFLQAIRHIGLD--KAVPKKILAFMSVPYLTR 263
Query: 123 TQVASHAQKY--FLRR 136
VASH QKY FLRR
Sbjct: 264 ENVASHLQKYRIFLRR 279
>sp|Q6NRB5|TAD2B_XENLA Transcriptional adapter 2-beta OS=Xenopus laevis GN=tada2b PE=2
SV=1
Length = 420
Score = 37.0 bits (84), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 24/40 (60%)
Query: 89 WTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASH 128
WT E +L L +++ G G+W ++ + +RTPT+V H
Sbjct: 70 WTSREEQLLLDAIEQFGFGNWEDMAAHVGASRTPTEVMEH 109
>sp|Q15554|TERF2_HUMAN Telomeric repeat-binding factor 2 OS=Homo sapiens GN=TERF2 PE=1
SV=2
Length = 500
Score = 35.4 bits (80), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 89 WTEEEHKLFLLGLQKVGKGDWRGISRNF 116
WT EE + G+QK G+G+W IS+N+
Sbjct: 450 WTVEESEWVKAGVQKYGEGNWAAISKNY 477
>sp|Q5RBN9|TAD2B_PONAB Transcriptional adapter 2-beta OS=Pongo abelii GN=TADA2B PE=2 SV=1
Length = 420
Score = 35.0 bits (79), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 23/40 (57%)
Query: 89 WTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASH 128
WT E +L L +++ G G+W ++ + +RTP +V H
Sbjct: 70 WTSREEQLLLDAIEQFGFGNWEDMAAHVGASRTPQEVMEH 109
>sp|Q86TJ2|TAD2B_HUMAN Transcriptional adapter 2-beta OS=Homo sapiens GN=TADA2B PE=1 SV=2
Length = 420
Score = 35.0 bits (79), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 23/40 (57%)
Query: 89 WTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASH 128
WT E +L L +++ G G+W ++ + +RTP +V H
Sbjct: 70 WTSREEQLLLDAIEQFGFGNWEDMAAHVGASRTPQEVMEH 109
>sp|Q9ZVD3|ARR13_ARATH Putative two-component response regulator ARR13 OS=Arabidopsis
thaliana GN=ARR13 PE=2 SV=2
Length = 572
Score = 34.3 bits (77), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 53/114 (46%), Gaps = 10/114 (8%)
Query: 68 ADDGVHNNSSRASRERKRGVPWTEEEHKLFLLGLQKVGKGDW---RGISRNFVKTRTPTQ 124
+DDG S + +K+ + WT LFL +Q +G + ++ V T
Sbjct: 213 SDDG----ESLSQPPKKKKIWWTNPLQDLFLQAIQHIGYDKVVPKKILAIMNVPYLTREN 268
Query: 125 VASHAQKYFLRRSNLNRRRRRSSLFDITTDSVA-ATPMEEELVDHQDHNPSQSY 177
VASH QKY L + + R S L D DS+ T ++E V++ + PS S+
Sbjct: 269 VASHLQKYRLFVKRVVHQGRFSMLSDRGKDSMFRQTHIKEPYVNY--YTPSTSW 320
>sp|P11986|INO1_YEAST Inositol-3-phosphate synthase OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=INO1 PE=1 SV=3
Length = 533
Score = 33.9 bits (76), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Query: 145 RSSLFDITTDSVAATPMEEELVDHQDHNPSQSYPLLPPTPAETSNKSGGFSMMPALPVVL 204
R S+ ++ DS+ ATP+ +L+ + SY + P + + ++ L L
Sbjct: 429 RISIHNVCEDSLLATPLIIDLLVMTEFCTRVSYKKVDPVKEDAGKFENFYPVLTFLSYWL 488
Query: 205 PVPIENPMENLTLGQNSQRTAGE-ATRLIRPVP 236
P+ P + G N QRTA E RL+ +P
Sbjct: 489 KAPLTRPGFHPVNGLNKQRTALENFLRLLIGLP 521
>sp|Q9FJ16|APRR4_ARATH Putative two-component response regulator-like APRR4 OS=Arabidopsis
thaliana GN=APRR4 PE=3 SV=1
Length = 292
Score = 33.9 bits (76), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 36/75 (48%), Gaps = 23/75 (30%)
Query: 73 HNNSSRASRERKRGVPWTEEEHKLFL-----LGLQK--------VGKGDWRGISRNFVKT 119
HN+ + AS +KR V W EE H+ FL LGL++ V K D+ ISR
Sbjct: 212 HNDRACASSAKKRRVVWDEELHQNFLNAVDFLGLERAVPKKILDVMKVDY--ISRE---- 265
Query: 120 RTPTQVASHAQKYFL 134
VASH Q FL
Sbjct: 266 ----NVASHLQVTFL 276
>sp|Q54K19|MYBD_DICDI Myb-like protein D OS=Dictyostelium discoideum GN=mybD PE=3 SV=1
Length = 595
Score = 33.9 bits (76), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Query: 74 NNSSRASRERKRGVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYF 133
+N ++ ++ WT+EE + K GK W+ I +F +T QV SH Q Y
Sbjct: 428 DNQDDGKKKHRKNAIWTQEEDEKMAQLYNKYGKS-WKAIHSHF-DDKTREQVQSHGQ-YL 484
Query: 134 LR 135
+R
Sbjct: 485 IR 486
>sp|Q5UAK0|MIER1_MOUSE Mesoderm induction early response protein 1 OS=Mus musculus
GN=Mier1 PE=1 SV=2
Length = 511
Score = 33.9 bits (76), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 13/107 (12%)
Query: 89 WTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVAS------HAQKYFLRRSNLNRR 142
WTEEE + F GL+ GK D+ I N V+TR+ + + +++Y
Sbjct: 287 WTEEECRNFEQGLKAYGK-DFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFG 345
Query: 143 RRRSSLFDITTDSVAATPMEEELVDHQDHNPSQSYPLLPPTPAETSN 189
+++ +L TD + + L+D + S P PPT + +SN
Sbjct: 346 KKKYNLHPGVTDYM------DRLLDESESAASSRAPSPPPTASNSSN 386
>sp|Q8N108|MIER1_HUMAN Mesoderm induction early response protein 1 OS=Homo sapiens
GN=MIER1 PE=1 SV=2
Length = 512
Score = 33.9 bits (76), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 13/107 (12%)
Query: 89 WTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVAS------HAQKYFLRRSNLNRR 142
WTEEE + F GL+ GK D+ I N V+TR+ + + +++Y
Sbjct: 288 WTEEECRNFEQGLKAYGK-DFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFG 346
Query: 143 RRRSSLFDITTDSVAATPMEEELVDHQDHNPSQSYPLLPPTPAETSN 189
+++ +L TD + + L+D + S P PPT + +SN
Sbjct: 347 KKKYNLHPGVTDYM------DRLLDESESAASSRAPSPPPTASNSSN 387
>sp|Q5REE1|MIER1_PONAB Mesoderm induction early response protein 1 OS=Pongo abelii
GN=MIER1 PE=2 SV=2
Length = 512
Score = 33.9 bits (76), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 13/107 (12%)
Query: 89 WTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVAS------HAQKYFLRRSNLNRR 142
WTEEE + F GL+ GK D+ I N V+TR+ + + +++Y
Sbjct: 288 WTEEECRNFEQGLKAYGK-DFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFG 346
Query: 143 RRRSSLFDITTDSVAATPMEEELVDHQDHNPSQSYPLLPPTPAETSN 189
+++ +L TD + + L+D + S P PPT + +SN
Sbjct: 347 KKKYNLHPGVTDYM------DRLLDESESAASSRAPSPPPTASNSSN 387
>sp|Q9FFH0|GLK2_ARATH Transcription activator GLK2 OS=Arabidopsis thaliana GN=GLK2 PE=2
SV=1
Length = 386
Score = 33.5 bits (75), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Query: 82 ERKRGVPWTEEEHKLFLLGLQKVGKGDW---RGISRNFVKTRTPTQVASHAQKYFLRRSN 138
++K V WT E H+ F+ ++++G R + VK+ T VASH QKY R +
Sbjct: 145 KKKPKVDWTPELHRKFVQAVEQLGVDKAVPSRILEIMNVKSLTRHNVASHLQKYRSHRKH 204
Query: 139 LNRRRRRSSLFDITTDSVAA 158
L R ++ +++ + A
Sbjct: 205 LLAREAEAASWNLRRHATVA 224
>sp|Q9SIV3|GLK1_ARATH Transcription activator GLK1 OS=Arabidopsis thaliana GN=GLK1 PE=2
SV=2
Length = 420
Score = 33.5 bits (75), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 47/108 (43%), Gaps = 15/108 (13%)
Query: 55 NNKDDVAAA------------GYASADDGVHNNSSRASRERKRGVPWTEEEHKLFLLGLQ 102
+ +DDVAA Y+S+ +N S +RK V WT E H+ F+ ++
Sbjct: 112 SKRDDVAAETVTYDGDSDRKRKYSSSASSKNNRISNNEGKRKVKVDWTPELHRRFVEAVE 171
Query: 103 KVGKGDW---RGISRNFVKTRTPTQVASHAQKYFLRRSNLNRRRRRSS 147
++G R + V T VASH QKY R +L R ++
Sbjct: 172 QLGVDKAVPSRILELMGVHCLTRHNVASHLQKYRSHRKHLLAREAEAA 219
>sp|Q6LA43|APRR2_ARATH Two-component response regulator-like APRR2 OS=Arabidopsis thaliana
GN=APRR2 PE=2 SV=2
Length = 535
Score = 33.1 bits (74), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Query: 71 GVHNNSSRASRERKRGVPWTEEEHKLFLLGLQKVGKGDW---RGISRNFVKTRTPTQVAS 127
G+ N S + +K V WT E HK F+ ++++G R + V T T VAS
Sbjct: 285 GIKNVSGNKTSRKK--VDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVGTLTRHNVAS 342
Query: 128 HAQKYFLRRSNL 139
H QK+ R N+
Sbjct: 343 HLQKFRQHRKNI 354
>sp|F4IEY4|TRB5_ARATH Telomere repeat-binding factor 5 OS=Arabidopsis thaliana
GN=At1g72740 PE=2 SV=1
Length = 287
Score = 32.7 bits (73), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 87 VPWTEEEHKLFLLGLQKVGKGDWRGISRN 115
+ WT EE + L G++K G G W+ I R+
Sbjct: 6 LKWTAEEEEALLAGIRKHGPGKWKNILRD 34
>sp|P62598|ARR12_ARATH Two-component response regulator ARR12 OS=Arabidopsis thaliana
GN=ARR12 PE=2 SV=2
Length = 596
Score = 32.7 bits (73), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 65/160 (40%), Gaps = 46/160 (28%)
Query: 9 AVNGGGCEIMLFGVRVVVDSMRKSVSLNNLSQY--EQPQDNSSNCNNNNNKDDVAAAGYA 66
V G C+ +L VR+ L N+ Q+ D + NNN +K D
Sbjct: 107 GVTHGACDYLLKPVRIE--------ELKNIWQHVVRSRFDKNRGSNNNGDKRD------G 152
Query: 67 SADDGVHN---NSSRASRERK----------------------RGVPWTEEEHKLFLLGL 101
S ++GV N N+ + +R+RK + V WT E HK F+ +
Sbjct: 153 SGNEGVGNSDQNNGKGNRKRKDQYNEDEDEDRDDNDDSCAQKKQRVVWTVELHKKFVAAV 212
Query: 102 QKVGKGDW---RGISRNFVKTRTPTQVASHAQKY--FLRR 136
++G + + V+ T VASH QK+ +L+R
Sbjct: 213 NQLGYEKAMPKKILDLMNVEKLTRENVASHLQKFRLYLKR 252
>sp|Q503N9|TAD2B_DANRE Transcriptional adapter 2-beta OS=Danio rerio GN=tada2b PE=2 SV=1
Length = 486
Score = 32.0 bits (71), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 12/46 (26%), Positives = 24/46 (52%)
Query: 89 WTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFL 134
WT E + L +++ G G+W ++ + +RTP +V H ++
Sbjct: 70 WTSREEQSLLDAIEQYGFGNWEDMAAHVGASRTPQEVMDHYVSMYI 115
>sp|Q5NAN5|GLK2_ORYSJ Probable transcription factor GLK2 OS=Oryza sativa subsp. japonica
GN=GLK2 PE=2 SV=1
Length = 539
Score = 32.0 bits (71), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 82 ERKRGVPWTEEEHKLFLLGLQKVGKGDW---RGISRNFVKTRTPTQVASHAQKYFLRRSN 138
+RK V WT E H+ F+ ++++G R + ++ T +ASH QKY R +
Sbjct: 213 KRKVKVDWTPELHRRFVQAVEQLGIDKAVPSRILELMGIECLTRHNIASHLQKYRSHRKH 272
Query: 139 LNRRRRRSSLF 149
L R ++ +
Sbjct: 273 LMAREAEAASW 283
>sp|O60130|YH7G_SCHPO Putative transcriptional regulatory protein C16G5.16
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC16G5.16 PE=1 SV=1
Length = 827
Score = 31.6 bits (70), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 43/107 (40%), Gaps = 32/107 (29%)
Query: 99 LGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTDSVAA 158
L L+ GK D+RG S FV F++ + N I +S
Sbjct: 126 LSLKDDGKADFRGSSSGFV---------------FMKNIHQN----------IARNSTVP 160
Query: 159 TPMEEELVDHQDHNPSQSYPLLPPTPAETSNKSGGFSMMPALPVVLP 205
P++E +P S+P LPPTPAE +K P L + LP
Sbjct: 161 NPVQESNSSSSQPDP-LSFPYLPPTPAEDEHKK------PPLKIQLP 200
>sp|Q7XBH4|MYB4_ORYSJ Myb-related protein Myb4 OS=Oryza sativa subsp. japonica GN=MYB4
PE=2 SV=2
Length = 257
Score = 31.6 bits (70), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Query: 84 KRGVPWTEEEHKLFLLGLQKVGKGDWRGISRN 115
K+G PWT EE K+ + +Q+ G G+WR + +
Sbjct: 13 KKG-PWTPEEDKVLVAHIQRHGHGNWRALPKQ 43
>sp|Q9PU53|TERF2_CHICK Telomeric repeat-binding factor 2 OS=Gallus gallus GN=TERF2 PE=1
SV=2
Length = 718
Score = 31.6 bits (70), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 89 WTEEEHKLFLLGLQKVGKGDWRGISRNF-VKTRTPTQV 125
WT +E + G++K G+G W+ IS + + RT Q+
Sbjct: 668 WTVQESEWIKDGVRKYGEGRWKTISEKYPFQNRTSVQI 705
>sp|Q7T105|MIER1_XENLA Mesoderm induction early response protein 1 OS=Xenopus laevis
GN=mier1 PE=2 SV=1
Length = 495
Score = 31.2 bits (69), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Query: 89 WTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRS 137
WTEEE + F GL+ GK D+ I N V+TR+ + A Y ++S
Sbjct: 279 WTEEECRNFEQGLKAYGK-DFHLIQANKVRTRSVGECV--AFYYMWKKS 324
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.127 0.363
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 111,765,761
Number of Sequences: 539616
Number of extensions: 4814895
Number of successful extensions: 42594
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 157
Number of HSP's that attempted gapping in prelim test: 36643
Number of HSP's gapped (non-prelim): 5412
length of query: 295
length of database: 191,569,459
effective HSP length: 117
effective length of query: 178
effective length of database: 128,434,387
effective search space: 22861320886
effective search space used: 22861320886
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 61 (28.1 bits)