Your job contains 1 sequence.
>022564
MSSLPNEAVYEKEKNGVTWPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSV
SVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLS
GSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTG
YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAG
VIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEFTCRCFMIMKKK
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 022564
(295 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2005518 - symbol:SHM1 "serine transhydroxymeth... 1392 2.3e-142 1
TAIR|locus:2148463 - symbol:SHM2 "serine hydroxymethyltra... 1323 4.7e-135 1
ASPGD|ASPL0000008876 - symbol:AN10745 species:162425 "Eme... 965 4.1e-97 1
POMBASE|SPAC18G6.04c - symbol:shm2 "serine hydroxymethylt... 965 4.1e-97 1
CGD|CAL0003822 - symbol:SHM1 species:5476 "Candida albica... 959 1.8e-96 1
UNIPROTKB|Q59PP7 - symbol:SHM1 "Putative uncharacterized ... 959 1.8e-96 1
UNIPROTKB|G4MRB4 - symbol:MGG_13781 "Serine hydroxymethyl... 957 2.9e-96 1
POMBASE|SPAC24C9.12c - symbol:SPAC24C9.12c "glycine hydro... 953 7.6e-96 1
CGD|CAL0001464 - symbol:SHM2 species:5476 "Candida albica... 950 1.6e-95 1
UNIPROTKB|O13426 - symbol:SHM2 "Serine hydroxymethyltrans... 950 1.6e-95 1
ASPGD|ASPL0000040474 - symbol:AN3058 species:162425 "Emer... 944 6.8e-95 1
UNIPROTKB|Q60V73 - symbol:mel-32 "Serine hydroxymethyltra... 941 1.4e-94 1
TAIR|locus:2127806 - symbol:SHM3 "serine hydroxymethyltra... 940 1.8e-94 1
SGD|S000004048 - symbol:SHM2 "Cytosolic serine hydroxymet... 931 1.6e-93 1
WB|WBGene00003214 - symbol:mel-32 species:6239 "Caenorhab... 930 2.1e-93 1
UNIPROTKB|P50432 - symbol:mel-32 "Serine hydroxymethyltra... 930 2.1e-93 1
UNIPROTKB|E1BS67 - symbol:SHMT1 "Uncharacterized protein"... 922 1.5e-92 1
UNIPROTKB|F1SL74 - symbol:LOC100626911 "Serine hydroxymet... 911 2.1e-91 1
RGD|1308582 - symbol:Shmt2 "serine hydroxymethyltransfera... 911 2.1e-91 1
ZFIN|ZDB-GENE-071213-1 - symbol:shmt2 "serine hydroxymeth... 909 3.5e-91 1
UNIPROTKB|A8MYA6 - symbol:SHMT1 "Serine hydroxymethyltran... 907 5.7e-91 1
UNIPROTKB|P34896 - symbol:SHMT1 "Serine hydroxymethyltran... 907 5.7e-91 1
UNIPROTKB|P34897 - symbol:SHMT2 "Serine hydroxymethyltran... 906 7.3e-91 1
RGD|1312011 - symbol:Shmt1 "serine hydroxymethyltransfera... 902 1.9e-90 1
UNIPROTKB|E2R4L7 - symbol:SHMT2 "Uncharacterized protein"... 901 2.5e-90 1
UNIPROTKB|G4NDG3 - symbol:MGG_00923 "Serine hydroxymethyl... 901 2.5e-90 1
DICTYBASE|DDB_G0277947 - symbol:shmt1 "serine hydroxymeth... 900 3.1e-90 1
MGI|MGI:98299 - symbol:Shmt1 "serine hydroxymethyltransfe... 900 3.1e-90 1
UNIPROTKB|Q3SZ20 - symbol:SHMT2 "Serine hydroxymethyltran... 898 5.1e-90 1
FB|FBgn0029823 - symbol:CG3011 species:7227 "Drosophila m... 895 1.1e-89 1
ZFIN|ZDB-GENE-040426-1558 - symbol:shmt1 "serine hydroxym... 895 1.1e-89 1
UNIPROTKB|E2RIV3 - symbol:SHMT1 "Uncharacterized protein"... 894 1.4e-89 1
UNIPROTKB|P14519 - symbol:SHMT2 "Serine hydroxymethyltran... 894 1.4e-89 1
TAIR|locus:2129251 - symbol:SHM4 "serine hydroxymethyltra... 883 2.0e-88 1
UNIPROTKB|Q5E9P9 - symbol:SHMT1 "Serine hydroxymethyltran... 875 1.4e-87 1
DICTYBASE|DDB_G0291652 - symbol:shmt2 "serine hydroxymeth... 874 1.8e-87 1
TAIR|locus:2119545 - symbol:EDA36 "EMBRYO SAC DEVELOPMENT... 857 1.1e-85 1
SGD|S000000467 - symbol:SHM1 "Mitochondrial serine hydrox... 851 4.9e-85 1
TAIR|locus:2035937 - symbol:SHM7 "serine hydroxymethyltra... 788 2.3e-78 1
TAIR|locus:2030581 - symbol:SHM6 "serine hydroxymethyltra... 778 2.7e-77 1
UNIPROTKB|G3V4W5 - symbol:SHMT2 "Serine hydroxymethyltran... 537 6.1e-66 2
UNIPROTKB|G3V5L0 - symbol:SHMT2 "Serine hydroxymethyltran... 663 4.1e-65 1
GENEDB_PFALCIPARUM|PFL1720w - symbol:PFL1720w "Serine hyd... 651 7.6e-64 1
UNIPROTKB|Q8I566 - symbol:PFL1720w "Serine hydroxymethylt... 651 7.6e-64 1
TIGR_CMR|GSU_1607 - symbol:GSU_1607 "serine hydroxymethyl... 616 3.9e-60 1
UNIPROTKB|P0A825 - symbol:glyA species:83333 "Escherichia... 595 6.6e-58 1
TIGR_CMR|CPS_2477 - symbol:CPS_2477 "serine hydroxymethyl... 582 1.6e-56 1
TIGR_CMR|CHY_2557 - symbol:CHY_2557 "serine hydroxymethyl... 579 3.3e-56 1
TIGR_CMR|DET_0436 - symbol:DET_0436 "Serine hydroxymethyl... 578 4.2e-56 1
TIGR_CMR|CPS_4031 - symbol:CPS_4031 "serine hydroxymethyl... 577 5.3e-56 1
UNIPROTKB|Q9KTG1 - symbol:glyA1 "Serine hydroxymethyltran... 576 6.8e-56 1
TIGR_CMR|VC_0941 - symbol:VC_0941 "serine hydroxymethyltr... 576 6.8e-56 1
TIGR_CMR|SO_3471 - symbol:SO_3471 "serine hydroxymethyltr... 574 1.1e-55 1
TIGR_CMR|CJE_0451 - symbol:CJE_0451 "serine hydroxymethyl... 571 2.3e-55 1
TIGR_CMR|CBU_1419 - symbol:CBU_1419 "serine hydroxymethyl... 560 3.4e-54 1
TIGR_CMR|ECH_0311 - symbol:ECH_0311 "serine hydroxymethyl... 558 5.5e-54 1
TIGR_CMR|SPO_1572 - symbol:SPO_1572 "serine hydroxymethyl... 543 2.1e-52 1
TIGR_CMR|SPO_2940 - symbol:SPO_2940 "serine hydroxymethyl... 543 2.1e-52 1
TIGR_CMR|BA_5558 - symbol:BA_5558 "serine hydroxymethyltr... 539 5.6e-52 1
UNIPROTKB|G3V540 - symbol:SHMT2 "Serine hydroxymethyltran... 537 9.2e-52 1
UNIPROTKB|O53615 - symbol:glyA2 "Serine hydroxymethyltran... 535 1.5e-51 1
TIGR_CMR|APH_0154 - symbol:APH_0154 "serine hydroxymethyl... 535 1.5e-51 1
TIGR_CMR|CPS_0728 - symbol:CPS_0728 "serine hydroxymethyl... 531 4.0e-51 1
TIGR_CMR|NSE_0218 - symbol:NSE_0218 "serine hydroxymethyl... 525 1.7e-50 1
UNIPROTKB|O53441 - symbol:glyA1 "Serine hydroxymethyltran... 524 2.2e-50 1
UNIPROTKB|G3V2Y4 - symbol:SHMT2 "Serine hydroxymethyltran... 523 2.8e-50 1
TIGR_CMR|CPS_3844 - symbol:CPS_3844 "serine hydroxymethyl... 517 1.2e-49 1
UNIPROTKB|B4DPM9 - symbol:SHMT1 "Serine hydroxymethyltran... 515 2.0e-49 1
UNIPROTKB|J3KRZ5 - symbol:SHMT1 "Serine hydroxymethyltran... 511 5.2e-49 1
UNIPROTKB|Q9KMP4 - symbol:glyA2 "Serine hydroxymethyltran... 500 7.7e-48 1
TIGR_CMR|VC_A0278 - symbol:VC_A0278 "serine hydroxymethyl... 500 7.7e-48 1
UNIPROTKB|I3LGT5 - symbol:I3LGT5 "Serine hydroxymethyltra... 486 2.3e-46 1
UNIPROTKB|G3V2W0 - symbol:SHMT2 "Serine hydroxymethyltran... 466 3.1e-44 1
UNIPROTKB|G3V4X0 - symbol:SHMT2 "Serine hydroxymethyltran... 461 1.0e-43 1
UNIPROTKB|G3V2E4 - symbol:SHMT2 "Serine hydroxymethyltran... 420 2.3e-39 1
UNIPROTKB|G3V4T0 - symbol:SHMT2 "Serine hydroxymethyltran... 420 2.3e-39 1
UNIPROTKB|G3V3Y8 - symbol:SHMT2 "Serine hydroxymethyltran... 409 3.4e-38 1
UNIPROTKB|G3V241 - symbol:SHMT2 "Serine hydroxymethyltran... 388 5.7e-36 1
UNIPROTKB|B4DLV4 - symbol:SHMT2 "Serine hydroxymethyltran... 374 1.7e-34 1
UNIPROTKB|H0YIZ0 - symbol:SHMT2 "Serine hydroxymethyltran... 365 1.5e-33 1
UNIPROTKB|Q4KLG7 - symbol:Shmt1 "Serine hydroxymethyltran... 360 5.2e-33 1
TIGR_CMR|SPO_3529 - symbol:SPO_3529 "serine hydroxymethyl... 211 1.1e-15 1
UNIPROTKB|J3KRK5 - symbol:SHMT1 "Serine hydroxymethyltran... 166 3.9e-12 1
UNIPROTKB|G3V2D2 - symbol:SHMT2 "Serine hydroxymethyltran... 154 9.1e-11 1
>TAIR|locus:2005518 [details] [associations]
symbol:SHM1 "serine transhydroxymethyltransferase 1"
species:3702 "Arabidopsis thaliana" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA;ISS;TAS]
[GO:0005739 "mitochondrion" evidence=ISM;IDA] [GO:0006544 "glycine
metabolic process" evidence=IEA;ISS] [GO:0006563 "L-serine
metabolic process" evidence=IEA;ISS] [GO:0019464 "glycine
decarboxylation via glycine cleavage system" evidence=IMP]
[GO:0030170 "pyridoxal phosphate binding" evidence=IEA] [GO:0005759
"mitochondrial matrix" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009626
"plant-type hypersensitive response" evidence=TAS] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0046686 "response to cadmium
ion" evidence=IEP] [GO:0009409 "response to cold" evidence=IEP;RCA]
[GO:0010319 "stromule" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009853 "photorespiration" evidence=IMP]
[GO:0016020 "membrane" evidence=IDA] [GO:0008266 "poly(U) RNA
binding" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009534
"chloroplast thylakoid" evidence=IDA] [GO:0009570 "chloroplast
stroma" evidence=IDA] [GO:0009697 "salicylic acid biosynthetic
process" evidence=RCA] [GO:0009814 "defense response, incompatible
interaction" evidence=RCA] [GO:0019684 "photosynthesis, light
reaction" evidence=RCA] [GO:0042742 "defense response to bacterium"
evidence=RCA] UniPathway:UPA00193 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0005886
GO:GO:0005634 GO:GO:0046686 GO:GO:0009570 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 EMBL:CP002687 GenomeReviews:CT486007_GR
EMBL:AL161592 GO:GO:0008266 GO:GO:0005759 GO:GO:0048046
GO:GO:0009409 GO:GO:0009626 EMBL:AL035538 GO:GO:0009853
GO:GO:0009534 GO:GO:0022626 GO:GO:0010319 GO:GO:0006544
GO:GO:0035999 eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 OMA:GKIDYED HOGENOM:HOG000239405 EMBL:AJ271726
EMBL:AY054254 EMBL:AY057645 EMBL:AY070726 EMBL:AF428388
EMBL:BT006353 IPI:IPI00525727 PIR:T05620 RefSeq:NP_195506.1
UniGene:At.21766 ProteinModelPortal:Q9SZJ5 SMR:Q9SZJ5 IntAct:Q9SZJ5
STRING:Q9SZJ5 PaxDb:Q9SZJ5 PRIDE:Q9SZJ5 ProMEX:Q9SZJ5
EnsemblPlants:AT4G37930.1 GeneID:829949 KEGG:ath:AT4G37930
TAIR:At4g37930 InParanoid:Q9SZJ5 PhylomeDB:Q9SZJ5
ProtClustDB:PLN03226 BioCyc:MetaCyc:AT4G37930-MONOMER
Genevestigator:Q9SZJ5 GermOnline:AT4G37930 Uniprot:Q9SZJ5
Length = 517
Score = 1392 (495.1 bits), Expect = 2.3e-142, P = 2.3e-142
Identities = 266/283 (93%), Positives = 276/283 (97%)
Query: 1 MSSLPNEAVYEKEKNGVTWPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSV 60
MSSLP+EAV EKE++ VTWPKQLNAPLE VDPEIADIIEHEKARQWKGLELIPSENFTSV
Sbjct: 29 MSSLPSEAVDEKERSRVTWPKQLNAPLEEVDPEIADIIEHEKARQWKGLELIPSENFTSV 88
Query: 61 SVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLS 120
SVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAE+LCQKRALEAFRLDPEKWGVNVQ LS
Sbjct: 89 SVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFRLDPEKWGVNVQPLS 148
Query: 121 GSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTG 180
GSP+NF VYTALLKPH+RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL+ESTG
Sbjct: 149 GSPANFHVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTG 208
Query: 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAG 240
YIDYDQ+EKSATLFRPKLIVAGASAYARLYDY RIRKVCNKQKA+MLADMAHISGLVAA
Sbjct: 209 YIDYDQMEKSATLFRPKLIVAGASAYARLYDYARIRKVCNKQKAVMLADMAHISGLVAAN 268
Query: 241 VIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKE 283
VIPSPF+YADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKE
Sbjct: 269 VIPSPFDYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKE 311
>TAIR|locus:2148463 [details] [associations]
symbol:SHM2 "serine hydroxymethyltransferase 2"
species:3702 "Arabidopsis thaliana" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA;ISS] [GO:0005739
"mitochondrion" evidence=ISM;IDA] [GO:0006544 "glycine metabolic
process" evidence=IEA;ISS] [GO:0006563 "L-serine metabolic process"
evidence=IEA;ISS] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IDA]
[GO:0050897 "cobalt ion binding" evidence=IDA] [GO:0005747
"mitochondrial respiratory chain complex I" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009744 "response to
sucrose stimulus" evidence=RCA] [GO:0009749 "response to glucose
stimulus" evidence=RCA] [GO:0009750 "response to fructose stimulus"
evidence=RCA] UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0005829
EMBL:CP002688 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0008270 GO:GO:0050897
GO:GO:0005747 GO:GO:0008168 GO:GO:0006544 GO:GO:0035999
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 HOGENOM:HOG000239405 OMA:ERFRAIC HSSP:P07511
ProtClustDB:PLN03226 EMBL:BT001097 EMBL:BT001113 IPI:IPI00525834
RefSeq:NP_568488.2 RefSeq:NP_851081.1 UniGene:At.22652
ProteinModelPortal:Q8GRI1 STRING:Q8GRI1 PaxDb:Q8GRI1 PRIDE:Q8GRI1
EnsemblPlants:AT5G26780.2 EnsemblPlants:AT5G26780.3 GeneID:832736
KEGG:ath:AT5G26780 TAIR:At5g26780 InParanoid:Q8GRI1
PhylomeDB:Q8GRI1 Genevestigator:Q8GRI1 Uniprot:Q8GRI1
Length = 533
Score = 1323 (470.8 bits), Expect = 4.7e-135, P = 4.7e-135
Identities = 253/283 (89%), Positives = 268/283 (94%)
Query: 1 MSSLPNEAVYEKEKNGVTWPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSV 60
MSSL A+ E EK+ +W KQLNA L+ +DPE+ADIIE EKARQWKG ELIPSENFTS+
Sbjct: 29 MSSLSTAAMAESEKSRSSWIKQLNASLDEIDPEVADIIELEKARQWKGFELIPSENFTSL 88
Query: 61 SVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLS 120
SVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAE+LCQKRALEAF+LDP KWGVNVQSLS
Sbjct: 89 SVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFQLDPSKWGVNVQSLS 148
Query: 121 GSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTG 180
GSP+NFQVYTALLKPH+RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL+E+TG
Sbjct: 149 GSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDENTG 208
Query: 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAG 240
YIDYDQLEKSA LFRPKLIVAGASAYARLYDY RIRKVCNKQKA+MLADMAHISGLVAAG
Sbjct: 209 YIDYDQLEKSAVLFRPKLIVAGASAYARLYDYARIRKVCNKQKAVMLADMAHISGLVAAG 268
Query: 241 VIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKE 283
VIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKG+KEINKQGKE
Sbjct: 269 VIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGLKEINKQGKE 311
>ASPGD|ASPL0000008876 [details] [associations]
symbol:AN10745 species:162425 "Emericella nidulans"
[GO:0006544 "glycine metabolic process" evidence=IEA] [GO:0006563
"L-serine metabolic process" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0030170
"pyridoxal phosphate binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] UniPathway:UPA00193 HAMAP:MF_00051
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PROSITE:PS00096 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 EMBL:BN001301 GO:GO:0008168 GO:GO:0006544
GO:GO:0035999 GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680
HOGENOM:HOG000239405 OMA:LELTHQF ProteinModelPortal:C8V028
EnsemblFungi:CADANIAT00007210 Uniprot:C8V028
Length = 600
Score = 965 (344.8 bits), Expect = 4.1e-97, P = 4.1e-97
Identities = 179/261 (68%), Positives = 216/261 (82%)
Query: 23 LNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGAR 82
L APLE DP + +I++ EK RQ + LIPSENFTS +V+ A+GSVM NKYSEGYPGAR
Sbjct: 126 LTAPLEQADPSVYNILQKEKKRQQHFINLIPSENFTSQAVLDALGSVMQNKYSEGYPGAR 185
Query: 83 YYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMAL 142
YYGGNE+ID AE LCQ+RALE FRL PE+WGVNVQ LSGSP+N +ALL HDR+M L
Sbjct: 186 YYGGNEHIDEAERLCQQRALETFRLSPEEWGVNVQPLSGSPANLYAISALLNTHDRLMGL 245
Query: 143 DLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 202
DLPHGGHLSHGYQT TKKIS +S +FET+PYRL+ESTG IDY+ LEK A L+RPKLI+AG
Sbjct: 246 DLPHGGHLSHGYQTPTKKISFISKYFETLPYRLDESTGLIDYESLEKQALLYRPKLIIAG 305
Query: 203 ASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRG 262
SAY+RL DY R+R++ + A +++DMAHISGLVAAGVIPSPF ++DVVTTTTHKSLRG
Sbjct: 306 TSAYSRLIDYPRMRQIADNAGAYLMSDMAHISGLVAAGVIPSPFAHSDVVTTTTHKSLRG 365
Query: 263 PRGAMIFFRKGVKEINKQGKE 283
PRGAMIF+RKG++ +K+G +
Sbjct: 366 PRGAMIFYRKGIRRTDKKGNQ 386
>POMBASE|SPAC18G6.04c [details] [associations]
symbol:shm2 "serine hydroxymethyltransferase Shm2
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004372
"glycine hydroxymethyltransferase activity" evidence=ISS]
[GO:0005739 "mitochondrion" evidence=ISS;IDA] [GO:0006544 "glycine
metabolic process" evidence=ISS] [GO:0006563 "L-serine metabolic
process" evidence=IEA] [GO:0006730 "one-carbon metabolic process"
evidence=IC] [GO:0009070 "serine family amino acid biosynthetic
process" evidence=ISS] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] UniPathway:UPA00193 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 PomBase:SPAC18G6.04c
GO:GO:0005739 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0006730 GO:GO:0006544 GO:GO:0035999
eggNOG:COG0112 GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680
HOGENOM:HOG000239405 PIR:T37918 RefSeq:NP_593668.2 STRING:Q10104
EnsemblFungi:SPAC18G6.04c.1 GeneID:2542242 OrthoDB:EOG4V1B88
NextBio:20803308 GO:GO:0009070 Uniprot:Q10104
Length = 488
Score = 965 (344.8 bits), Expect = 4.1e-97, P = 4.1e-97
Identities = 183/261 (70%), Positives = 211/261 (80%)
Query: 21 KQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPG 80
K L APL DP + I+E EK+RQ + + LI SENFTS +VM A+GS+M NKYSEGYPG
Sbjct: 28 KLLKAPLAECDPTVYKILESEKSRQKESIALIASENFTSRAVMDALGSIMQNKYSEGYPG 87
Query: 81 ARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIM 140
ARYYGGNE+ID AE LCQ RALEAF LD EKWGVNVQ SGSP+N Q Y A++KPHDR+M
Sbjct: 88 ARYYGGNEFIDQAERLCQTRALEAFHLDGEKWGVNVQPHSGSPANLQAYQAVMKPHDRLM 147
Query: 141 ALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIV 200
LDLPHGGHLSHG+ T K ISAVS +F TMPY +N+ TG IDYD LEK+A FRPK+IV
Sbjct: 148 GLDLPHGGHLSHGFSTPQKAISAVSTYFSTMPYNVNKETGIIDYDSLEKAAIQFRPKVIV 207
Query: 201 AGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSL 260
AGASAYARL DY+R+RK+ A +L DMAHISGLVAAGVIPSPFEYAD+VTTTTHKSL
Sbjct: 208 AGASAYARLVDYKRMRKITEMCNAYLLCDMAHISGLVAAGVIPSPFEYADIVTTTTHKSL 267
Query: 261 RGPRGAMIFFRKGVKEINKQG 281
RGPRGAMIF+RKG + +K+G
Sbjct: 268 RGPRGAMIFYRKGTRSHDKRG 288
>CGD|CAL0003822 [details] [associations]
symbol:SHM1 species:5476 "Candida albicans" [GO:0004372
"glycine hydroxymethyltransferase activity" evidence=ISS]
[GO:0006544 "glycine metabolic process" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0006730 "one-carbon metabolic
process" evidence=ISS] [GO:0009070 "serine family amino acid
biosynthetic process" evidence=IEA] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 CGD:CAL0003822 GO:GO:0005739
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0006730 GO:GO:0006544
GO:GO:0035999 GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680
EMBL:AACQ01000187 RefSeq:XP_711682.1 RefSeq:XP_888942.1
ProteinModelPortal:Q59PP7 SMR:Q59PP7 STRING:Q59PP7 GeneID:3646724
GeneID:3703901 KEGG:cal:CaO19.1342 KEGG:cal:CaO19_1342
Uniprot:Q59PP7
Length = 493
Score = 959 (342.6 bits), Expect = 1.8e-96, P = 1.8e-96
Identities = 178/261 (68%), Positives = 218/261 (83%)
Query: 23 LNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGAR 82
++ ++ VDPE+ADI+ E+ RQ + LIPSENFTS +VM +GS M NKYSEGYPG R
Sbjct: 35 ISKSVQDVDPEMADILNQERTRQKNSITLIPSENFTSKAVMDLLGSEMQNKYSEGYPGER 94
Query: 83 YYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMAL 142
YYGGNE ID AE+LCQKRALEAF LDP +WGVNVQ LSG+P+N Y+A+L+ DRIM L
Sbjct: 95 YYGGNEIIDKAEALCQKRALEAFGLDPSQWGVNVQPLSGAPANLYAYSAILEVGDRIMGL 154
Query: 143 DLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 202
DLPHGGHLSHGYQT+T KIS +S +F+TMPYRLNE TG IDYD LEK+A LFRPK+IVAG
Sbjct: 155 DLPHGGHLSHGYQTNTTKISYISKYFQTMPYRLNEETGIIDYDTLEKNAQLFRPKVIVAG 214
Query: 203 ASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRG 262
ASAY+R+ DY+R+R++ +K A +L+DMAHISGLV+AGV SPF Y+D+VTTTTHKSLRG
Sbjct: 215 ASAYSRVIDYKRMRQIADKVGAYLLSDMAHISGLVSAGVTDSPFPYSDIVTTTTHKSLRG 274
Query: 263 PRGAMIFFRKGVKEINKQGKE 283
PRGAMIFFRKG++++ K+GKE
Sbjct: 275 PRGAMIFFRKGIRKVTKKGKE 295
>UNIPROTKB|Q59PP7 [details] [associations]
symbol:SHM1 "Putative uncharacterized protein SHM1"
species:237561 "Candida albicans SC5314" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0006544 "glycine metabolic
process" evidence=ISS] [GO:0006730 "one-carbon metabolic process"
evidence=ISS] UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 CGD:CAL0003822
GO:GO:0005739 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0006730 GO:GO:0006544
GO:GO:0035999 GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680
EMBL:AACQ01000187 RefSeq:XP_711682.1 RefSeq:XP_888942.1
ProteinModelPortal:Q59PP7 SMR:Q59PP7 STRING:Q59PP7 GeneID:3646724
GeneID:3703901 KEGG:cal:CaO19.1342 KEGG:cal:CaO19_1342
Uniprot:Q59PP7
Length = 493
Score = 959 (342.6 bits), Expect = 1.8e-96, P = 1.8e-96
Identities = 178/261 (68%), Positives = 218/261 (83%)
Query: 23 LNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGAR 82
++ ++ VDPE+ADI+ E+ RQ + LIPSENFTS +VM +GS M NKYSEGYPG R
Sbjct: 35 ISKSVQDVDPEMADILNQERTRQKNSITLIPSENFTSKAVMDLLGSEMQNKYSEGYPGER 94
Query: 83 YYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMAL 142
YYGGNE ID AE+LCQKRALEAF LDP +WGVNVQ LSG+P+N Y+A+L+ DRIM L
Sbjct: 95 YYGGNEIIDKAEALCQKRALEAFGLDPSQWGVNVQPLSGAPANLYAYSAILEVGDRIMGL 154
Query: 143 DLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 202
DLPHGGHLSHGYQT+T KIS +S +F+TMPYRLNE TG IDYD LEK+A LFRPK+IVAG
Sbjct: 155 DLPHGGHLSHGYQTNTTKISYISKYFQTMPYRLNEETGIIDYDTLEKNAQLFRPKVIVAG 214
Query: 203 ASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRG 262
ASAY+R+ DY+R+R++ +K A +L+DMAHISGLV+AGV SPF Y+D+VTTTTHKSLRG
Sbjct: 215 ASAYSRVIDYKRMRQIADKVGAYLLSDMAHISGLVSAGVTDSPFPYSDIVTTTTHKSLRG 274
Query: 263 PRGAMIFFRKGVKEINKQGKE 283
PRGAMIFFRKG++++ K+GKE
Sbjct: 275 PRGAMIFFRKGIRKVTKKGKE 295
>UNIPROTKB|G4MRB4 [details] [associations]
symbol:MGG_13781 "Serine hydroxymethyltransferase"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0008168 EMBL:CM001231 GO:GO:0006544 GO:GO:0035999 KO:K00600
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 RefSeq:XP_003710851.1
ProteinModelPortal:G4MRB4 SMR:G4MRB4 EnsemblFungi:MGG_13781T0
GeneID:5049001 KEGG:mgr:MGG_13781 Uniprot:G4MRB4
Length = 516
Score = 957 (341.9 bits), Expect = 2.9e-96, P = 2.9e-96
Identities = 178/260 (68%), Positives = 217/260 (83%)
Query: 23 LNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGAR 82
L++ L+ DP + DI+E EK RQ + LIPSENFTS +V+ A+GS M NKYSEGYPGAR
Sbjct: 39 LSSHLQTADPAMYDIVEKEKQRQKHYINLIPSENFTSQAVLDALGSPMQNKYSEGYPGAR 98
Query: 83 YYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMAL 142
YYGGNE+ID +E LCQ+RALE F LD ++WGVNVQ+LSG+P+N VY+AL+ HDR+M L
Sbjct: 99 YYGGNEFIDQSERLCQQRALETFGLDDKQWGVNVQALSGAPANLYVYSALMGVHDRMMGL 158
Query: 143 DLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 202
DLPHGGHLSHGYQT TKKIS +S +FET+PYRL+ESTGYIDYD+LE+ A ++RPK+IVAG
Sbjct: 159 DLPHGGHLSHGYQTPTKKISFISKYFETVPYRLDESTGYIDYDKLEELAHIYRPKIIVAG 218
Query: 203 ASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRG 262
SAY+R DY+R+R++C+K A MLADMAHISG+VAA VIP PF YAD+VTTTTHKSLRG
Sbjct: 219 TSAYSRFIDYKRMREICDKVNAYMLADMAHISGMVAAKVIPGPFGYADIVTTTTHKSLRG 278
Query: 263 PRGAMIFFRKGVKEINKQGK 282
PRGAMIFFRKGV+ N + K
Sbjct: 279 PRGAMIFFRKGVRSTNPKTK 298
>POMBASE|SPAC24C9.12c [details] [associations]
symbol:SPAC24C9.12c "glycine hydroxymethyltransferase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004372
"glycine hydroxymethyltransferase activity" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006544 "glycine
metabolic process" evidence=ISS] [GO:0006563 "L-serine metabolic
process" evidence=ISS] [GO:0006730 "one-carbon metabolic process"
evidence=ISS] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] UniPathway:UPA00193 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 PomBase:SPAC24C9.12c
GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CU329670 GO:GO:0006730
GO:GO:0006544 GO:GO:0035999 eggNOG:COG0112 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 HOGENOM:HOG000239405
OrthoDB:EOG444PTT PIR:T38353 RefSeq:NP_594037.1
ProteinModelPortal:O13972 SMR:O13972 STRING:O13972 PRIDE:O13972
EnsemblFungi:SPAC24C9.12c.1 GeneID:2542651 KEGG:spo:SPAC24C9.12c
OMA:HMVLVDV NextBio:20803700 Uniprot:O13972
Length = 467
Score = 953 (340.5 bits), Expect = 7.6e-96, P = 7.6e-96
Identities = 177/256 (69%), Positives = 213/256 (83%)
Query: 26 PLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYG 85
PL+ DP +A+I+ HE RQ + LI SENFTS +VM A+GSVM+NKYSEGYPGARYYG
Sbjct: 11 PLKEQDPTVAEIMRHEADRQRSSVVLIASENFTSRAVMDALGSVMSNKYSEGYPGARYYG 70
Query: 86 GNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLP 145
GN++ID E+LCQ+RAL AF LDP KWGVNVQ LSGSP+N QVY A++ PH R+M LDLP
Sbjct: 71 GNKFIDQIETLCQERALAAFNLDPAKWGVNVQCLSGSPANMQVYQAIMPPHGRLMGLDLP 130
Query: 146 HGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASA 205
GGHLSHGYQTDTKKISAVS +FE+MPYR++ +TG IDYD LE A LFRPK++VAG SA
Sbjct: 131 SGGHLSHGYQTDTKKISAVSTYFESMPYRVDPNTGLIDYDMLEHDAQLFRPKILVAGTSA 190
Query: 206 YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG 265
Y RL DY R+R++ + A ++ DMAHISGLV+AGVIPSPFEYADVVTTTTHKSLRGPRG
Sbjct: 191 YCRLIDYARMRQIADSVNAYLVVDMAHISGLVSAGVIPSPFEYADVVTTTTHKSLRGPRG 250
Query: 266 AMIFFRKGVKEINKQG 281
AMIFFR+G+++ +K+G
Sbjct: 251 AMIFFRRGLRKHDKKG 266
>CGD|CAL0001464 [details] [associations]
symbol:SHM2 species:5476 "Candida albicans" [GO:0005737
"cytoplasm" evidence=ISS] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006544
"glycine metabolic process" evidence=ISS] [GO:0006730 "one-carbon
metabolic process" evidence=ISS] [GO:0043332 "mating projection
tip" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
UniPathway:UPA00193 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 CGD:CAL0001464 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0006730 EMBL:AACQ01000046
EMBL:AACQ01000047 GO:GO:0006544 GO:GO:0035999 eggNOG:COG0112
KO:K00600 GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680
HOGENOM:HOG000239405 EMBL:AF009966 RefSeq:XP_718020.1
RefSeq:XP_718086.1 ProteinModelPortal:O13426 SMR:O13426
STRING:O13426 COMPLUYEAST-2DPAGE:O13426 GeneID:3640306
GeneID:3640372 KEGG:cal:CaO19.13173 KEGG:cal:CaO19.5750
Uniprot:O13426
Length = 470
Score = 950 (339.5 bits), Expect = 1.6e-95, P = 1.6e-95
Identities = 176/258 (68%), Positives = 216/258 (83%)
Query: 27 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGG 86
L+ DPE+ II+ E RQ + LI SENFT+ +V A+G+ M NKYSEGYPGARYYGG
Sbjct: 18 LKDTDPEVDQIIKDEIDRQQHSIVLIASENFTTTAVFDALGTPMCNKYSEGYPGARYYGG 77
Query: 87 NEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPH 146
NE+ID E LCQ+RAL+AF L P+KWGVNVQ+LSGSP+N QVY A++KPH+R+M LDLPH
Sbjct: 78 NEHIDRMELLCQERALKAFGLTPDKWGVNVQTLSGSPANLQVYQAIMKPHERLMGLDLPH 137
Query: 147 GGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY 206
GGHLSHGYQTD++KISAVS +FETMPYR++ TG IDYD LEK+A L+RPK++VAG SAY
Sbjct: 138 GGHLSHGYQTDSRKISAVSTYFETMPYRVDLETGLIDYDMLEKTAVLYRPKVLVAGTSAY 197
Query: 207 ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGA 266
RL DY+R+R++ +K A ++ DMAHISGL+AAGVIPSPFEYAD+VTTTTHKSLRGPRGA
Sbjct: 198 CRLIDYKRMREIADKVGAYLVVDMAHISGLIAAGVIPSPFEYADIVTTTTHKSLRGPRGA 257
Query: 267 MIFFRKGVKEIN-KQGKE 283
MIFFR+GV+ +N K G+E
Sbjct: 258 MIFFRRGVRSVNPKTGQE 275
>UNIPROTKB|O13426 [details] [associations]
symbol:SHM2 "Serine hydroxymethyltransferase, cytosolic"
species:237561 "Candida albicans SC5314" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0006544 "glycine metabolic process"
evidence=ISS] [GO:0006730 "one-carbon metabolic process"
evidence=ISS] UniPathway:UPA00193 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 CGD:CAL0001464
GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0006730 EMBL:AACQ01000046
EMBL:AACQ01000047 GO:GO:0006544 GO:GO:0035999 eggNOG:COG0112
KO:K00600 GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680
HOGENOM:HOG000239405 EMBL:AF009966 RefSeq:XP_718020.1
RefSeq:XP_718086.1 ProteinModelPortal:O13426 SMR:O13426
STRING:O13426 COMPLUYEAST-2DPAGE:O13426 GeneID:3640306
GeneID:3640372 KEGG:cal:CaO19.13173 KEGG:cal:CaO19.5750
Uniprot:O13426
Length = 470
Score = 950 (339.5 bits), Expect = 1.6e-95, P = 1.6e-95
Identities = 176/258 (68%), Positives = 216/258 (83%)
Query: 27 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGG 86
L+ DPE+ II+ E RQ + LI SENFT+ +V A+G+ M NKYSEGYPGARYYGG
Sbjct: 18 LKDTDPEVDQIIKDEIDRQQHSIVLIASENFTTTAVFDALGTPMCNKYSEGYPGARYYGG 77
Query: 87 NEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPH 146
NE+ID E LCQ+RAL+AF L P+KWGVNVQ+LSGSP+N QVY A++KPH+R+M LDLPH
Sbjct: 78 NEHIDRMELLCQERALKAFGLTPDKWGVNVQTLSGSPANLQVYQAIMKPHERLMGLDLPH 137
Query: 147 GGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY 206
GGHLSHGYQTD++KISAVS +FETMPYR++ TG IDYD LEK+A L+RPK++VAG SAY
Sbjct: 138 GGHLSHGYQTDSRKISAVSTYFETMPYRVDLETGLIDYDMLEKTAVLYRPKVLVAGTSAY 197
Query: 207 ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGA 266
RL DY+R+R++ +K A ++ DMAHISGL+AAGVIPSPFEYAD+VTTTTHKSLRGPRGA
Sbjct: 198 CRLIDYKRMREIADKVGAYLVVDMAHISGLIAAGVIPSPFEYADIVTTTTHKSLRGPRGA 257
Query: 267 MIFFRKGVKEIN-KQGKE 283
MIFFR+GV+ +N K G+E
Sbjct: 258 MIFFRRGVRSVNPKTGQE 275
>ASPGD|ASPL0000040474 [details] [associations]
symbol:AN3058 species:162425 "Emericella nidulans"
[GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=IEA;RCA] [GO:0006520 "cellular amino acid metabolic
process" evidence=RCA] [GO:0043332 "mating projection tip"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006544 "glycine
metabolic process" evidence=IEA] [GO:0006563 "L-serine metabolic
process" evidence=IEA] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0006730 "one-carbon metabolic process"
evidence=IEA] UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 EMBL:BN001306 GO:GO:0008168 GO:GO:0006544
GO:GO:0035999 GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680
HOGENOM:HOG000239405 OMA:FRRGVRS ProteinModelPortal:C8VIR5
EnsemblFungi:CADANIAT00010021 Uniprot:C8VIR5
Length = 471
Score = 944 (337.4 bits), Expect = 6.8e-95, P = 6.8e-95
Identities = 180/263 (68%), Positives = 213/263 (80%)
Query: 22 QLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGA 81
Q+ L DPE+A I+E+E RQ + + LI SENFTS +V A+GS M NKYSEGYPGA
Sbjct: 13 QMEDRLVDTDPEVAKIMENEIQRQRESVVLIASENFTSRAVFDALGSPMCNKYSEGYPGA 72
Query: 82 RYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMA 141
RYYGGN++ID E LCQ RAL+AF LD +KWGVNVQ LSGSP+N QVY AL++PHDR+M
Sbjct: 73 RYYGGNQHIDAIELLCQSRALKAFNLDADKWGVNVQCLSGSPANLQVYQALMRPHDRLMG 132
Query: 142 LDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA 201
LDLPHGGHLSHGYQT ++KISAVS +FET PYR+N TG IDYD LE +A L+RPK++VA
Sbjct: 133 LDLPHGGHLSHGYQTPSRKISAVSTYFETFPYRVNLETGIIDYDTLEANAELYRPKILVA 192
Query: 202 GASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLR 261
G SAY RL DY R+RK+ +K A ++ DMAHISGL+AAGVIPSPFEYADVVTTTTHKSLR
Sbjct: 193 GTSAYCRLIDYARMRKIADKVGAYLVVDMAHISGLIAAGVIPSPFEYADVVTTTTHKSLR 252
Query: 262 GPRGAMIFFRKGVKEIN-KQGKE 283
GPRGAMIFFRKGV+ + K GK+
Sbjct: 253 GPRGAMIFFRKGVRSTDPKTGKD 275
>UNIPROTKB|Q60V73 [details] [associations]
symbol:mel-32 "Serine hydroxymethyltransferase"
species:6238 "Caenorhabditis briggsae" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=TAS] [GO:0005575
"cellular_component" evidence=ND] [GO:0009069 "serine family amino
acid metabolic process" evidence=TAS] [GO:0030170 "pyridoxal
phosphate binding" evidence=TAS] UniPathway:UPA00193
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0006544 GO:GO:0035999
eggNOG:COG0112 GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680
HOGENOM:HOG000239405 EMBL:HE600934 HSSP:P07511
ProteinModelPortal:Q60V73 STRING:Q60V73 PRIDE:Q60V73
EnsemblMetazoa:CBG19673 WormBase:CBG19673 GO:GO:0009069
Uniprot:Q60V73
Length = 511
Score = 941 (336.3 bits), Expect = 1.4e-94, P = 1.4e-94
Identities = 174/257 (67%), Positives = 215/257 (83%)
Query: 27 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGG 86
+E +DPE+ +I+++EK+RQ +GLELI SENFTS +VM A+GS M NKYSEGYPGARYYGG
Sbjct: 56 VEKIDPEVFNIMKNEKSRQRRGLELIASENFTSKAVMDALGSAMCNKYSEGYPGARYYGG 115
Query: 87 NEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPH 146
NE+ID E LCQKRALE F LDP KWGVNVQSLSGSP+NF VYTAL+ + RIM LDLP
Sbjct: 116 NEFIDQMEILCQKRALEVFGLDPAKWGVNVQSLSGSPANFAVYTALVGANGRIMGLDLPD 175
Query: 147 GGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY 206
GGHL+HG+ T +K+SA S FF++MPY+++ +G IDYD+LE++A LFRPK+++AG S Y
Sbjct: 176 GGHLTHGFFTPARKVSATSEFFQSMPYKVDAQSGLIDYDKLEENAMLFRPKVLIAGVSCY 235
Query: 207 ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGA 266
AR DYER RK+ K A +++DMAHISGLVAAG+IPSPFEY+DVVTTTTHKSLRGPRGA
Sbjct: 236 ARHLDYERFRKIATKAGAYLMSDMAHISGLVAAGLIPSPFEYSDVVTTTTHKSLRGPRGA 295
Query: 267 MIFFRKGVKEINKQGKE 283
MIF+RKGV+ +N +G E
Sbjct: 296 MIFYRKGVRSVNAKGVE 312
>TAIR|locus:2127806 [details] [associations]
symbol:SHM3 "serine hydroxymethyltransferase 3"
species:3702 "Arabidopsis thaliana" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA;ISS;IDA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0006544 "glycine
metabolic process" evidence=IEA;ISS] [GO:0006563 "L-serine
metabolic process" evidence=IEA;ISS] [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0009570 "chloroplast stroma" evidence=IDA]
[GO:0009536 "plastid" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0006164 "purine nucleotide biosynthetic process"
evidence=RCA] UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0009570
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CP002687 GO:GO:0008168
GO:GO:0006544 GO:GO:0035999 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 OMA:SKELTGW IPI:IPI00529123 RefSeq:NP_001119098.1
RefSeq:NP_567895.1 UniGene:At.27717 ProteinModelPortal:F4JUC7
SMR:F4JUC7 PRIDE:F4JUC7 EnsemblPlants:AT4G32520.1
EnsemblPlants:AT4G32520.2 GeneID:829387 KEGG:ath:AT4G32520
Uniprot:F4JUC7
Length = 529
Score = 940 (336.0 bits), Expect = 1.8e-94, P = 1.8e-94
Identities = 182/270 (67%), Positives = 213/270 (78%)
Query: 3 SLPNEAVYEKEKNGVTWPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSV 62
SLPN + KE P + + L VDPE+ II EK RQ++ LELI SENFTS +V
Sbjct: 65 SLPNVEISSKEI-----PFE-DYGLGEVDPEVRTIITKEKDRQFRSLELIASENFTSRAV 118
Query: 63 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 122
M+AVGS +TNKYSEG PG RYYGGNEYID E+LCQ RAL AFRLD KWGVNVQ LSGS
Sbjct: 119 MEAVGSCLTNKYSEGLPGKRYYGGNEYIDQLETLCQNRALAAFRLDSTKWGVNVQPLSGS 178
Query: 123 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYI 182
P+NF VYTA+L PHDRIM LDLPHGGHLSHG+ T +++S SI+FE+MPYRL+ESTG +
Sbjct: 179 PANFAVYTAILSPHDRIMGLDLPHGGHLSHGFMTAKRRVSGTSIYFESMPYRLDESTGIV 238
Query: 183 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI 242
DYD LEK+ATLFRPKLI+AGASAY+R +DY R+RK+ + A ++ DMAHISGLVAA V+
Sbjct: 239 DYDMLEKTATLFRPKLIIAGASAYSRDFDYPRMRKIADSVGAFLMMDMAHISGLVAASVV 298
Query: 243 PSPFEYADVVTTTTHKSLRGPRGAMIFFRK 272
PFEY D+VTTTTHKSLRGPRG MIFFRK
Sbjct: 299 ADPFEYCDIVTTTTHKSLRGPRGGMIFFRK 328
>SGD|S000004048 [details] [associations]
symbol:SHM2 "Cytosolic serine hydroxymethyltransferase"
species:4932 "Saccharomyces cerevisiae" [GO:0005737 "cytoplasm"
evidence=IEA;IMP;IDA] [GO:0035999 "tetrahydrofolate
interconversion" evidence=IEA] [GO:0006730 "one-carbon metabolic
process" evidence=IEA;IGI;IMP] [GO:0030170 "pyridoxal phosphate
binding" evidence=IEA] [GO:0006563 "L-serine metabolic process"
evidence=IEA] [GO:0006544 "glycine metabolic process" evidence=IEA]
[GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=IEA;IMP] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0043332 "mating projection
tip" evidence=IDA] UniPathway:UPA00193 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 SGD:S000004048
GO:GO:0005886 GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0043332 EMBL:BK006945 GO:GO:0006730 GO:GO:0006544
GO:GO:0035999 EMBL:X94607 eggNOG:COG0112 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 HOGENOM:HOG000239405
GeneTree:ENSGT00390000002762 EMBL:L22529 EMBL:Z73230 PIR:S61632
RefSeq:NP_013159.1 ProteinModelPortal:P37291 SMR:P37291
DIP:DIP-2602N IntAct:P37291 MINT:MINT-423439 STRING:P37291
PaxDb:P37291 PeptideAtlas:P37291 PRIDE:P37291 EnsemblFungi:YLR058C
GeneID:850747 KEGG:sce:YLR058C CYGD:YLR058c OMA:FRRGVRS
OrthoDB:EOG444PTT BioCyc:MetaCyc:YLR058C-MONOMER NextBio:966873
Genevestigator:P37291 GermOnline:YLR058C Uniprot:P37291
Length = 469
Score = 931 (332.8 bits), Expect = 1.6e-93, P = 1.6e-93
Identities = 174/264 (65%), Positives = 215/264 (81%)
Query: 21 KQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPG 80
K + + L DPE+ II+ E RQ ++LI SENFTS SV A+G+ ++NKYSEGYPG
Sbjct: 11 KLITSHLVDTDPEVDSIIKDEIERQKHSIDLIASENFTSTSVFDALGTPLSNKYSEGYPG 70
Query: 81 ARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIM 140
ARYYGGNE+ID E LCQ+RAL+AF + P+KWGVNVQ+LSGSP+N QVY A++KPH+R+M
Sbjct: 71 ARYYGGNEHIDRMEILCQQRALKAFHVTPDKWGVNVQTLSGSPANLQVYQAIMKPHERLM 130
Query: 141 ALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIV 200
L LP GGHLSHGY T+ +KISAVS +FE+ PYR+N TG IDYD LEK+A L+RPK++V
Sbjct: 131 GLYLPDGGHLSHGYATENRKISAVSTYFESFPYRVNPETGIIDYDTLEKNAILYRPKVLV 190
Query: 201 AGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSL 260
AG SAY RL DY+R+R++ +K A ++ DMAHISGL+AAGVIPSPFEYAD+VTTTTHKSL
Sbjct: 191 AGTSAYCRLIDYKRMREIADKCGAYLMVDMAHISGLIAAGVIPSPFEYADIVTTTTHKSL 250
Query: 261 RGPRGAMIFFRKGVKEIN-KQGKE 283
RGPRGAMIFFR+GV+ IN K GKE
Sbjct: 251 RGPRGAMIFFRRGVRSINPKTGKE 274
>WB|WBGene00003214 [details] [associations]
symbol:mel-32 species:6239 "Caenorhabditis elegans"
[GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=IEA] [GO:0006544 "glycine metabolic process" evidence=IEA]
[GO:0006563 "L-serine metabolic process" evidence=IEA] [GO:0030170
"pyridoxal phosphate binding" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0005739 "mitochondrion" evidence=IDA] UniPathway:UPA00193
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
GO:GO:0005739 GO:GO:0009792 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0006544 GO:GO:0035999 EMBL:FO080365 eggNOG:COG0112 KO:K00600
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 HOGENOM:HOG000239405
OMA:ERFRAIC GeneTree:ENSGT00390000002762 GO:GO:0009069 PIR:B88483
RefSeq:NP_741197.1 RefSeq:NP_741198.1 ProteinModelPortal:P50432
SMR:P50432 DIP:DIP-26240N IntAct:P50432 MINT:MINT-227953
STRING:P50432 PaxDb:P50432 PRIDE:P50432 EnsemblMetazoa:C05D11.11b.1
EnsemblMetazoa:C05D11.11b.2 EnsemblMetazoa:C05D11.11b.3
GeneID:175915 KEGG:cel:CELE_C05D11.11 UCSC:F44F4.6 CTD:175915
WormBase:C05D11.11a WormBase:C05D11.11b InParanoid:P50432
NextBio:890288 Uniprot:P50432
Length = 507
Score = 930 (332.4 bits), Expect = 2.1e-93, P = 2.1e-93
Identities = 173/255 (67%), Positives = 211/255 (82%)
Query: 27 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGG 86
+E VDPE+ DI+++EK RQ +GLELI SENFTS +VM A+GS M NKYSEGYPGARYYGG
Sbjct: 52 VEKVDPEVFDIMKNEKKRQRRGLELIASENFTSKAVMDALGSAMCNKYSEGYPGARYYGG 111
Query: 87 NEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPH 146
NE+ID E LCQKRALE F LDP KWGVNVQ LSGSP+NF VYTA++ + RIM LDLP
Sbjct: 112 NEFIDQMELLCQKRALEVFGLDPAKWGVNVQPLSGSPANFAVYTAIVGSNGRIMGLDLPD 171
Query: 147 GGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY 206
GGHL+HG+ T +K+SA S FF+++PY+++ +TG IDYD+LE++A LFRPK I+AG S Y
Sbjct: 172 GGHLTHGFFTPARKVSATSEFFQSLPYKVDPTTGLIDYDKLEQNAMLFRPKAIIAGVSCY 231
Query: 207 ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGA 266
AR DYER RK+ K A +++DMAHISGLVAAG+IPSPFEY+DVVTTTTHKSLRGPRGA
Sbjct: 232 ARHLDYERFRKIATKAGAYLMSDMAHISGLVAAGLIPSPFEYSDVVTTTTHKSLRGPRGA 291
Query: 267 MIFFRKGVKEINKQG 281
+IF+RKGV+ N +G
Sbjct: 292 LIFYRKGVRSTNAKG 306
>UNIPROTKB|P50432 [details] [associations]
symbol:mel-32 "Serine hydroxymethyltransferase"
species:6239 "Caenorhabditis elegans" [GO:0030170 "pyridoxal
phosphate binding" evidence=TAS] [GO:0009790 "embryo development"
evidence=IMP] [GO:0004372 "glycine hydroxymethyltransferase
activity" evidence=TAS] [GO:0009069 "serine family amino acid
metabolic process" evidence=TAS] UniPathway:UPA00193
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
GO:GO:0005739 GO:GO:0009792 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0006544 GO:GO:0035999 EMBL:FO080365 eggNOG:COG0112 KO:K00600
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 HOGENOM:HOG000239405
OMA:ERFRAIC GeneTree:ENSGT00390000002762 GO:GO:0009069 PIR:B88483
RefSeq:NP_741197.1 RefSeq:NP_741198.1 ProteinModelPortal:P50432
SMR:P50432 DIP:DIP-26240N IntAct:P50432 MINT:MINT-227953
STRING:P50432 PaxDb:P50432 PRIDE:P50432 EnsemblMetazoa:C05D11.11b.1
EnsemblMetazoa:C05D11.11b.2 EnsemblMetazoa:C05D11.11b.3
GeneID:175915 KEGG:cel:CELE_C05D11.11 UCSC:F44F4.6 CTD:175915
WormBase:C05D11.11a WormBase:C05D11.11b InParanoid:P50432
NextBio:890288 Uniprot:P50432
Length = 507
Score = 930 (332.4 bits), Expect = 2.1e-93, P = 2.1e-93
Identities = 173/255 (67%), Positives = 211/255 (82%)
Query: 27 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGG 86
+E VDPE+ DI+++EK RQ +GLELI SENFTS +VM A+GS M NKYSEGYPGARYYGG
Sbjct: 52 VEKVDPEVFDIMKNEKKRQRRGLELIASENFTSKAVMDALGSAMCNKYSEGYPGARYYGG 111
Query: 87 NEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPH 146
NE+ID E LCQKRALE F LDP KWGVNVQ LSGSP+NF VYTA++ + RIM LDLP
Sbjct: 112 NEFIDQMELLCQKRALEVFGLDPAKWGVNVQPLSGSPANFAVYTAIVGSNGRIMGLDLPD 171
Query: 147 GGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY 206
GGHL+HG+ T +K+SA S FF+++PY+++ +TG IDYD+LE++A LFRPK I+AG S Y
Sbjct: 172 GGHLTHGFFTPARKVSATSEFFQSLPYKVDPTTGLIDYDKLEQNAMLFRPKAIIAGVSCY 231
Query: 207 ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGA 266
AR DYER RK+ K A +++DMAHISGLVAAG+IPSPFEY+DVVTTTTHKSLRGPRGA
Sbjct: 232 ARHLDYERFRKIATKAGAYLMSDMAHISGLVAAGLIPSPFEYSDVVTTTTHKSLRGPRGA 291
Query: 267 MIFFRKGVKEINKQG 281
+IF+RKGV+ N +G
Sbjct: 292 LIFYRKGVRSTNAKG 306
>UNIPROTKB|E1BS67 [details] [associations]
symbol:SHMT1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=IEA] [GO:0006544 "glycine metabolic process" evidence=IEA]
[GO:0030170 "pyridoxal phosphate binding" evidence=IEA] [GO:0035999
"tetrahydrofolate interconversion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006565 "L-serine catabolic process" evidence=IEA] [GO:0009113
"purine nucleobase biosynthetic process" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0046655
"folic acid metabolic process" evidence=IEA] [GO:0051262 "protein
tetramerization" evidence=IEA] UniPathway:UPA00193 HAMAP:MF_00051
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
GO:GO:0005739 GO:GO:0005634 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0051262 GO:GO:0009113 GO:GO:0006544 GO:GO:0035999
GO:GO:0046655 GO:GO:0006565 GO:GO:0004372 PANTHER:PTHR11680
GeneTree:ENSGT00390000002762 OMA:VDLRESH EMBL:AADN02023704
IPI:IPI00573440 Ensembl:ENSGALT00000008093 Uniprot:E1BS67
Length = 486
Score = 922 (329.6 bits), Expect = 1.5e-92, P = 1.5e-92
Identities = 173/265 (65%), Positives = 212/265 (80%)
Query: 21 KQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPG 80
K L PL+ DPE+ +II+ EK RQ GLELI SENF S +V++A+GS + NKYSEGYPG
Sbjct: 22 KMLLEPLDSNDPEVYNIIKKEKQRQRLGLELIASENFASCAVLEALGSCLNNKYSEGYPG 81
Query: 81 ARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIM 140
RYYGG E++D E LCQKRAL+AFRLDP+KWGVNVQ SGSP+NF VYTAL++PH RIM
Sbjct: 82 QRYYGGTEFVDELERLCQKRALQAFRLDPQKWGVNVQPYSGSPANFAVYTALVEPHGRIM 141
Query: 141 ALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIV 200
LDLP GGHL+HG+ TD KKISA S+FFE+MPY++N TGYIDYD+LE++A LF PKLI+
Sbjct: 142 GLDLPDGGHLTHGFMTDKKKISATSVFFESMPYKVNPKTGYIDYDKLEENARLFHPKLII 201
Query: 201 A-GASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKS 259
A G S Y+R DY R+R++ N A ++ADMAHISGLVAAGV+PSPFE+ DVV+TTTHK+
Sbjct: 202 AAGVSCYSRNLDYARMRQIANANSAYLMADMAHISGLVAAGVVPSPFEHCDVVSTTTHKT 261
Query: 260 LRGPRGAMIFFRKGVKEIN-KQGKE 283
LRG R MIF+RKG + + K GKE
Sbjct: 262 LRGCRAGMIFYRKGTRSTDPKTGKE 286
>UNIPROTKB|F1SL74 [details] [associations]
symbol:LOC100626911 "Serine hydroxymethyltransferase"
species:9823 "Sus scrofa" [GO:0035999 "tetrahydrofolate
interconversion" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0030170
"pyridoxal phosphate binding" evidence=IEA] [GO:0006563 "L-serine
metabolic process" evidence=IEA] [GO:0006544 "glycine metabolic
process" evidence=IEA] UniPathway:UPA00193 HAMAP:MF_00051
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0006544 GO:GO:0035999
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 OMA:GKIDYED
GeneTree:ENSGT00390000002762 EMBL:CU633428 EMBL:FP340566
Ensembl:ENSSSCT00000023184 Ensembl:ENSSSCT00000023666
Uniprot:F1SL74
Length = 504
Score = 911 (325.7 bits), Expect = 2.1e-91, P = 2.1e-91
Identities = 172/254 (67%), Positives = 207/254 (81%)
Query: 31 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYI 90
DPE+ +++ EK RQ +GLELI SENF S + ++A+GS + NKYSEGYPG RYYGG E +
Sbjct: 53 DPEMWELLRREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVV 112
Query: 91 DMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHL 150
D E LCQ+RALEAF LDP +WGVNVQ SGSP+N YTALL+PHDRIM LDLP GGHL
Sbjct: 113 DEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAAYTALLQPHDRIMGLDLPDGGHL 172
Query: 151 SHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLY 210
+HGY TD K+ISA SIFFE+MPY+LN TG IDYDQL +A LFRP+LI+AG SAYARL
Sbjct: 173 THGYMTDVKRISATSIFFESMPYKLNPKTGLIDYDQLALTARLFRPRLIIAGTSAYARLI 232
Query: 211 DYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFF 270
DY R+R+VC++ KA +LADMAHISGLVAA VIPSPFE+ADVVTTTTHK+LRG R +IF+
Sbjct: 233 DYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFEHADVVTTTTHKTLRGARSGLIFY 292
Query: 271 RKGVKEIN-KQGKE 283
RKGV+ ++ K G+E
Sbjct: 293 RKGVRTVDPKTGRE 306
>RGD|1308582 [details] [associations]
symbol:Shmt2 "serine hydroxymethyltransferase 2 (mitochondrial)"
species:10116 "Rattus norvegicus" [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0004372 "glycine hydroxymethyltransferase
activity" evidence=ISO;IDA;TAS] [GO:0005739 "mitochondrion"
evidence=ISO;IDA;TAS] [GO:0005743 "mitochondrial inner membrane"
evidence=ISO;IDA] [GO:0005758 "mitochondrial intermembrane space"
evidence=IDA] [GO:0005759 "mitochondrial matrix" evidence=ISO;IDA]
[GO:0006544 "glycine metabolic process" evidence=IDA;TAS]
[GO:0006545 "glycine biosynthetic process" evidence=IDA]
[GO:0006563 "L-serine metabolic process" evidence=TAS] [GO:0006564
"L-serine biosynthetic process" evidence=IDA] [GO:0006730
"one-carbon metabolic process" evidence=ISO] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IDA] [GO:0008732
"L-allo-threonine aldolase activity" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IEA;ISO] [GO:0016597 "amino
acid binding" evidence=IPI] [GO:0019264 "glycine biosynthetic
process from serine" evidence=IDA] [GO:0030170 "pyridoxal phosphate
binding" evidence=IDA;TAS] [GO:0035999 "tetrahydrofolate
interconversion" evidence=IEA] [GO:0042645 "mitochondrial nucleoid"
evidence=IEA;ISO] [GO:0042802 "identical protein binding"
evidence=IDA] [GO:0051289 "protein homotetramerization"
evidence=IDA] UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 RGD:1308582
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0015630 GO:GO:0005743
GO:GO:0005758 GO:GO:0005759 GO:GO:0008284 GO:GO:0003682
GO:GO:0016597 GO:GO:0051289 GO:GO:0042802 GO:GO:0042645
GO:GO:0008168 GO:GO:0035999 GO:GO:0006564 GO:GO:0008732
eggNOG:COG0112 KO:K00600 GO:GO:0004372 PANTHER:PTHR11680
OMA:GKIDYED HOGENOM:HOG000239405 GO:GO:0019264
GeneTree:ENSGT00390000002762 HOVERGEN:HBG002807 CTD:6472
OrthoDB:EOG4G4GQ7 EMBL:BC085331 IPI:IPI00195109
RefSeq:NP_001008323.1 UniGene:Rn.9214 SMR:Q5U3Z7 IntAct:Q5U3Z7
STRING:Q5U3Z7 Ensembl:ENSRNOT00000011082 GeneID:299857
KEGG:rno:299857 InParanoid:Q5U3Z7 NextBio:645904
Genevestigator:Q5U3Z7 Uniprot:Q5U3Z7
Length = 504
Score = 911 (325.7 bits), Expect = 2.1e-91, P = 2.1e-91
Identities = 171/254 (67%), Positives = 208/254 (81%)
Query: 31 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYI 90
DPEI ++++ EK RQ +GLELI SENF S + ++A+GS + NKYSEGYPG RYYGG E +
Sbjct: 53 DPEIWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVV 112
Query: 91 DMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHL 150
D E LCQ+RALEAF LDP +WGVNVQ SGSP+N YTALL+PHDRIM LDLP GGHL
Sbjct: 113 DEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAAYTALLQPHDRIMGLDLPDGGHL 172
Query: 151 SHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLY 210
+HGY +D K+ISA SIFFE+MPY+LN TG IDYDQL +A LFRP+LI+AG SAYARL
Sbjct: 173 THGYMSDVKRISATSIFFESMPYKLNPQTGLIDYDQLALTARLFRPRLIIAGTSAYARLI 232
Query: 211 DYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFF 270
DY R+R+VC++ KA +LADMAHISGLVAA VIPSPF+YAD+VTTTTHK+LRG R +IF+
Sbjct: 233 DYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKYADIVTTTTHKTLRGARSGLIFY 292
Query: 271 RKGVKEIN-KQGKE 283
RKGV+ ++ K G+E
Sbjct: 293 RKGVRTVDPKTGQE 306
>ZFIN|ZDB-GENE-071213-1 [details] [associations]
symbol:shmt2 "serine hydroxymethyltransferase 2
(mitochondrial)" species:7955 "Danio rerio" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0006544 "glycine metabolic process"
evidence=IEA] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA;IDA] [GO:0006563 "L-serine metabolic process"
evidence=IEA] [GO:0004372 "glycine hydroxymethyltransferase
activity" evidence=IEA;IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0032259 "methylation" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0016740 "transferase
activity" evidence=IEA] HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 Pfam:PF00464
PIRSF:PIRSF000412 ZFIN:ZDB-GENE-071213-1 GO:GO:0005739
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0008168 GO:GO:0006544
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 HOGENOM:HOG000239405 GeneTree:ENSGT00390000002762
HOVERGEN:HBG002807 CTD:6472 EMBL:CABZ01098501 EMBL:CABZ01112226
EMBL:CABZ01112227 EMBL:CABZ01112228 EMBL:CABZ01112229
EMBL:CABZ01112230 EMBL:EF213101 IPI:IPI00862356
RefSeq:NP_001116846.1 UniGene:Dr.128606 SMR:A9LDD9 STRING:A9LDD9
Ensembl:ENSDART00000111064 GeneID:100144628 KEGG:dre:100144628
NextBio:20791462 Uniprot:A9LDD9
Length = 492
Score = 909 (325.0 bits), Expect = 3.5e-91, P = 3.5e-91
Identities = 169/253 (66%), Positives = 205/253 (81%)
Query: 31 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYI 90
DPE+ D++ EK RQ +GLELI SENF S + ++A GS + NKYSEGYPG RYYGG E +
Sbjct: 42 DPEMWDLLLKEKDRQCRGLELIASENFCSRAALEAQGSCLNNKYSEGYPGKRYYGGAEVV 101
Query: 91 DMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHL 150
D E LCQKRALEAF LDP+ WGVNVQ SGSP+NF YTA+L PH+RIM LDLP GGHL
Sbjct: 102 DQIELLCQKRALEAFDLDPQLWGVNVQPYSGSPANFAAYTAVLNPHERIMGLDLPDGGHL 161
Query: 151 SHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLY 210
+HGY +D ++ISA SI+FE+MPY+LN TG IDYDQ+E +A LFRPKLI+AG SAYARL
Sbjct: 162 THGYMSDVRRISATSIYFESMPYKLNPKTGLIDYDQMELTAKLFRPKLIIAGTSAYARLI 221
Query: 211 DYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFF 270
DY RI+ +C++ A MLADMAHISGLVAA IPSPF++AD+VTTTTHKSLRG R +IF+
Sbjct: 222 DYCRIKTLCSEINAYMLADMAHISGLVAAKAIPSPFQHADIVTTTTHKSLRGSRAGLIFY 281
Query: 271 RKGVKEINKQGKE 283
RKGV+ ++K+GKE
Sbjct: 282 RKGVRSVDKKGKE 294
>UNIPROTKB|A8MYA6 [details] [associations]
symbol:SHMT1 "Serine hydroxymethyltransferase, cytosolic"
species:9606 "Homo sapiens" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0006544
"glycine metabolic process" evidence=IEA] [GO:0006563 "L-serine
metabolic process" evidence=IEA] [GO:0030170 "pyridoxal phosphate
binding" evidence=IEA] [GO:0035999 "tetrahydrofolate
interconversion" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0005634 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0006544 GO:GO:0035999
EMBL:AC127537 GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680
HOGENOM:HOG000239405 HOVERGEN:HBG002807 HGNC:HGNC:10850
ChiTaRS:SHMT1 EMBL:AL353997 IPI:IPI00793862
ProteinModelPortal:A8MYA6 SMR:A8MYA6 STRING:A8MYA6
Ensembl:ENST00000395685 ArrayExpress:A8MYA6 Bgee:A8MYA6
Uniprot:A8MYA6
Length = 446
Score = 907 (324.3 bits), Expect = 5.7e-91, P = 5.7e-91
Identities = 171/264 (64%), Positives = 212/264 (80%)
Query: 21 KQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPG 80
K L PL+ D E+ +II+ E RQ GLELI SENF S +V++A+GS + NKYSEGYPG
Sbjct: 20 KMLAQPLKDSDVEVYNIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSEGYPG 79
Query: 81 ARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIM 140
RYYGG E+ID E+LCQKRAL+A++LDP+ WGVNVQ SGSP+NF VYTAL++PH RIM
Sbjct: 80 QRYYGGTEFIDELETLCQKRALQAYKLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIM 139
Query: 141 ALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIV 200
LDLP GGHL+HG+ TD KKISA SIFFE+MPY++N TGYI+YDQLE++A LF PKLI+
Sbjct: 140 GLDLPDGGHLTHGFMTDKKKISATSIFFESMPYKVNPDTGYINYDQLEENARLFHPKLII 199
Query: 201 AGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSL 260
AG S Y+R +Y R+RK+ ++ A ++ADMAHISGLVAAGV+PSPFE+ VVTTTTHK+L
Sbjct: 200 AGTSCYSRNLEYARLRKIADENGAYLMADMAHISGLVAAGVVPSPFEHCHVVTTTTHKTL 259
Query: 261 RGPRGAMIFFRKGVKEIN-KQGKE 283
RG R MIF+RKGVK ++ K GKE
Sbjct: 260 RGCRAGMIFYRKGVKSVDPKTGKE 283
>UNIPROTKB|P34896 [details] [associations]
symbol:SHMT1 "Serine hydroxymethyltransferase, cytosolic"
species:9606 "Homo sapiens" [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0008732 "L-allo-threonine aldolase activity"
evidence=IEA] [GO:0016597 "amino acid binding" evidence=IEA]
[GO:0019264 "glycine biosynthetic process from serine"
evidence=IEA] [GO:0051289 "protein homotetramerization"
evidence=IEA] [GO:0035999 "tetrahydrofolate interconversion"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0051262 "protein tetramerization" evidence=IDA]
[GO:0046655 "folic acid metabolic process" evidence=IDA;TAS]
[GO:0030170 "pyridoxal phosphate binding" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA;TAS] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IDA;TAS] [GO:0006565
"L-serine catabolic process" evidence=IDA] [GO:0009113 "purine
nucleobase biosynthetic process" evidence=IDA] [GO:0006766 "vitamin
metabolic process" evidence=TAS] [GO:0006767 "water-soluble vitamin
metabolic process" evidence=TAS] [GO:0034641 "cellular nitrogen
compound metabolic process" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] [GO:0045329 "carnitine
biosynthetic process" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
UniPathway:UPA00193 Reactome:REACT_111217 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 EMBL:L11931
GO:GO:0005829 GO:GO:0005739 GO:GO:0005634 GO:GO:0042803
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0051262 DrugBank:DB00114
GO:GO:0016597 GO:GO:0051289 GO:GO:0045329 DrugBank:DB00145
DrugBank:DB00116 EMBL:CH471196 GO:GO:0009113 GO:GO:0035999
GO:GO:0046655 GO:GO:0006565 DrugBank:DB01055 GO:GO:0008732
eggNOG:COG0112 KO:K00600 GO:GO:0004372 PANTHER:PTHR11680
HOGENOM:HOG000239405 GO:GO:0019264 CTD:6470 HOVERGEN:HBG002807
OrthoDB:EOG42Z4Q2 EMBL:L23928 EMBL:Y14485 EMBL:Y14486 EMBL:Y14487
EMBL:BC007979 EMBL:BC022874 EMBL:BC038598 IPI:IPI00002519
IPI:IPI00220668 IPI:IPI00220669 PIR:A46746 RefSeq:NP_004160.3
RefSeq:NP_683718.1 UniGene:Hs.513987 UniGene:Hs.636044 PDB:1BJ4
PDBsum:1BJ4 ProteinModelPortal:P34896 SMR:P34896 IntAct:P34896
STRING:P34896 PhosphoSite:P34896 DMDM:462184 PaxDb:P34896
PRIDE:P34896 DNASU:6470 Ensembl:ENST00000316694
Ensembl:ENST00000352886 Ensembl:ENST00000354098 GeneID:6470
KEGG:hsa:6470 UCSC:uc002gsz.3 UCSC:uc002gtb.3 GeneCards:GC17M018231
HGNC:HGNC:10850 HPA:HPA023314 MIM:182144 neXtProt:NX_P34896
PharmGKB:PA35753 InParanoid:P34896 OMA:VDLRESH BindingDB:P34896
ChEMBL:CHEMBL1772927 ChiTaRS:SHMT1 EvolutionaryTrace:P34896
GenomeRNAi:6470 NextBio:25133 ArrayExpress:P34896 Bgee:P34896
CleanEx:HS_SHMT1 Genevestigator:P34896 GermOnline:ENSG00000176974
Uniprot:P34896
Length = 483
Score = 907 (324.3 bits), Expect = 5.7e-91, P = 5.7e-91
Identities = 171/264 (64%), Positives = 212/264 (80%)
Query: 21 KQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPG 80
K L PL+ D E+ +II+ E RQ GLELI SENF S +V++A+GS + NKYSEGYPG
Sbjct: 20 KMLAQPLKDSDVEVYNIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSEGYPG 79
Query: 81 ARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIM 140
RYYGG E+ID E+LCQKRAL+A++LDP+ WGVNVQ SGSP+NF VYTAL++PH RIM
Sbjct: 80 QRYYGGTEFIDELETLCQKRALQAYKLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIM 139
Query: 141 ALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIV 200
LDLP GGHL+HG+ TD KKISA SIFFE+MPY++N TGYI+YDQLE++A LF PKLI+
Sbjct: 140 GLDLPDGGHLTHGFMTDKKKISATSIFFESMPYKVNPDTGYINYDQLEENARLFHPKLII 199
Query: 201 AGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSL 260
AG S Y+R +Y R+RK+ ++ A ++ADMAHISGLVAAGV+PSPFE+ VVTTTTHK+L
Sbjct: 200 AGTSCYSRNLEYARLRKIADENGAYLMADMAHISGLVAAGVVPSPFEHCHVVTTTTHKTL 259
Query: 261 RGPRGAMIFFRKGVKEIN-KQGKE 283
RG R MIF+RKGVK ++ K GKE
Sbjct: 260 RGCRAGMIFYRKGVKSVDPKTGKE 283
>UNIPROTKB|P34897 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase,
mitochondrial" species:9606 "Homo sapiens" [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0008168 "methyltransferase
activity" evidence=IEA] [GO:0005758 "mitochondrial intermembrane
space" evidence=IEA] [GO:0006564 "L-serine biosynthetic process"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0008732 "L-allo-threonine aldolase
activity" evidence=IEA] [GO:0016597 "amino acid binding"
evidence=IEA] [GO:0019264 "glycine biosynthetic process from
serine" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0051289 "protein homotetramerization"
evidence=IEA] [GO:0035999 "tetrahydrofolate interconversion"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0004372
"glycine hydroxymethyltransferase activity" evidence=IDA]
[GO:0006730 "one-carbon metabolic process" evidence=IDA]
[GO:0005759 "mitochondrial matrix" evidence=IDA] [GO:0005743
"mitochondrial inner membrane" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0042645 "mitochondrial nucleoid"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=IDA]
UniPathway:UPA00193 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0015630 GO:GO:0005743 GO:GO:0005758 GO:GO:0008284
EMBL:CH471054 DrugBank:DB00114 GO:GO:0003682 GO:GO:0016597
GO:GO:0051289 GO:GO:0042645 DrugBank:DB00145 DrugBank:DB00116
GO:GO:0008168 GO:GO:0006730 GO:GO:0035999 GO:GO:0006564
GO:GO:0008732 eggNOG:COG0112 KO:K00600 GO:GO:0004372
PANTHER:PTHR11680 OMA:GKIDYED HOGENOM:HOG000239405 GO:GO:0019264
HOVERGEN:HBG002807 CTD:6472 EMBL:AK315916 EMBL:BT006866
EMBL:AC137834 EMBL:BC011911 EMBL:BC013677 EMBL:BC032584
EMBL:BC044211 EMBL:Y12331 EMBL:U23143 EMBL:L11932 IPI:IPI00002520
IPI:IPI00795816 PIR:B46746 RefSeq:NP_001159828.1
RefSeq:NP_001159829.1 RefSeq:NP_001159830.1 RefSeq:NP_001159831.1
RefSeq:NP_005403.2 UniGene:Hs.741179 PDB:3OU5 PDBsum:3OU5
ProteinModelPortal:P34897 SMR:P34897 IntAct:P34897 STRING:P34897
PhosphoSite:P34897 DMDM:6226865 PaxDb:P34897 PRIDE:P34897
DNASU:6472 Ensembl:ENST00000328923 Ensembl:ENST00000414700
Ensembl:ENST00000449049 Ensembl:ENST00000553474
Ensembl:ENST00000557487 GeneID:6472 KEGG:hsa:6472 UCSC:uc001snf.2
GeneCards:GC12P057623 HGNC:HGNC:10852 HPA:HPA020543 HPA:HPA020549
MIM:138450 neXtProt:NX_P34897 PharmGKB:PA35755 InParanoid:P34897
PhylomeDB:P34897 BioCyc:MetaCyc:HS00049-MONOMER ChiTaRS:SHMT2
EvolutionaryTrace:P34897 GenomeRNAi:6472 NextBio:25141
ArrayExpress:P34897 Bgee:P34897 CleanEx:HS_SHMT2
Genevestigator:P34897 GermOnline:ENSG00000182199 Uniprot:P34897
Length = 504
Score = 906 (324.0 bits), Expect = 7.3e-91, P = 7.3e-91
Identities = 170/254 (66%), Positives = 209/254 (82%)
Query: 31 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYI 90
DPE+ ++++ EK RQ +GLELI SENF S + ++A+GS + NKYSEGYPG RYYGG E +
Sbjct: 53 DPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVV 112
Query: 91 DMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHL 150
D E LCQ+RALEAF LDP +WGVNVQ SGSP+N VYTALL+PHDRIM LDLP GGHL
Sbjct: 113 DEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHL 172
Query: 151 SHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLY 210
+HGY +D K+ISA SIFFE+MPY+LN TG IDY+QL +A LFRP+LI+AG SAYARL
Sbjct: 173 THGYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARLFRPRLIIAGTSAYARLI 232
Query: 211 DYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFF 270
DY R+R+VC++ KA +LADMAHISGLVAA VIPSPF++AD+VTTTTHK+LRG R +IF+
Sbjct: 233 DYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHADIVTTTTHKTLRGARSGLIFY 292
Query: 271 RKGVKEIN-KQGKE 283
RKGVK ++ K G+E
Sbjct: 293 RKGVKAVDPKTGRE 306
>RGD|1312011 [details] [associations]
symbol:Shmt1 "serine hydroxymethyltransferase 1 (soluble)"
species:10116 "Rattus norvegicus" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISO;IDA;TAS]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0005829 "cytosol" evidence=ISO;IDA;TAS] [GO:0006544 "glycine
metabolic process" evidence=IDA;TAS] [GO:0006545 "glycine
biosynthetic process" evidence=IDA] [GO:0006563 "L-serine metabolic
process" evidence=TAS] [GO:0006565 "L-serine catabolic process"
evidence=IEA;ISO] [GO:0008732 "L-allo-threonine aldolase activity"
evidence=IDA] [GO:0009113 "purine nucleobase biosynthetic process"
evidence=IEA;ISO] [GO:0016597 "amino acid binding" evidence=IPI]
[GO:0019264 "glycine biosynthetic process from serine"
evidence=IDA] [GO:0030170 "pyridoxal phosphate binding"
evidence=ISO;IDA;TAS] [GO:0035999 "tetrahydrofolate
interconversion" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IDA] [GO:0042803 "protein homodimerization
activity" evidence=IEA;ISO] [GO:0046655 "folic acid metabolic
process" evidence=IEA;ISO] [GO:0051262 "protein tetramerization"
evidence=ISO] [GO:0051289 "protein homotetramerization"
evidence=IDA] UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PROSITE:PS00096 RGD:1312011 GO:GO:0005829
GO:GO:0005739 GO:GO:0005634 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0016597 GO:GO:0051289 GO:GO:0042802 GO:GO:0009113
GO:GO:0035999 GO:GO:0046655 GO:GO:0006565 GO:GO:0008732 KO:K00600
GO:GO:0004372 PANTHER:PTHR11680 HOGENOM:HOG000239405 GO:GO:0019264
CTD:6470 GeneTree:ENSGT00390000002762 HOVERGEN:HBG002807
OrthoDB:EOG42Z4Q2 UniGene:Rn.3684 EMBL:AY383687 IPI:IPI00421364
RefSeq:NP_001041307.1 SMR:Q6TXG7 STRING:Q6TXG7
Ensembl:ENSRNOT00000007092 GeneID:287379 KEGG:rno:287379
UCSC:RGD:1312011 InParanoid:Q6TXG7 NextBio:625985
Genevestigator:Q6TXG7 Uniprot:Q6TXG7
Length = 681
Score = 902 (322.6 bits), Expect = 1.9e-90, P = 1.9e-90
Identities = 171/275 (62%), Positives = 213/275 (77%)
Query: 13 EKNGVTWP---KQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSV 69
E++ W K L PL+ D E+ II+ E RQ GLELI SENF S +V++A+GS
Sbjct: 206 ERDATVWASHEKMLTQPLKESDAEVYSIIKKESNRQRVGLELIASENFASRAVLEALGSC 265
Query: 70 MTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVY 129
+ NKYSEGYPG RYYGG E+ID E+LCQKRAL+A+ LDP+ WGVNVQ SGSP+NF VY
Sbjct: 266 LNNKYSEGYPGQRYYGGTEFIDELETLCQKRALQAYHLDPQCWGVNVQPYSGSPANFAVY 325
Query: 130 TALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEK 189
TAL++PH RIM LDLP GGHL+HG+ TD KKISA SIFFE+MPY++ TGYI+YDQLE+
Sbjct: 326 TALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMPYKVYPDTGYINYDQLEE 385
Query: 190 SATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYA 249
+A+LF PKLI+AG S Y+R DY R+RK+ + A ++ADMAHISGLVAAGV+PSPFE+
Sbjct: 386 NASLFHPKLIIAGTSCYSRNLDYARLRKIADDNGAYLMADMAHISGLVAAGVVPSPFEHC 445
Query: 250 DVVTTTTHKSLRGPRGAMIFFRKGVKEIN-KQGKE 283
VVTTTTHK+LRG R MIF+RKGV+ ++ K G+E
Sbjct: 446 HVVTTTTHKTLRGCRAGMIFYRKGVRSVDPKTGEE 480
>UNIPROTKB|E2R4L7 [details] [associations]
symbol:SHMT2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035999 "tetrahydrofolate interconversion"
evidence=IEA] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0006563 "L-serine metabolic process"
evidence=IEA] [GO:0006544 "glycine metabolic process" evidence=IEA]
[GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=IEA] UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 GO:GO:0006544 GO:GO:0035999 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 OMA:GKIDYED
GeneTree:ENSGT00390000002762 EMBL:AAEX03006944 EMBL:AAEX03006943
Ensembl:ENSCAFT00000000313 NextBio:20893182 Uniprot:E2R4L7
Length = 531
Score = 901 (322.2 bits), Expect = 2.5e-90, P = 2.5e-90
Identities = 168/254 (66%), Positives = 208/254 (81%)
Query: 31 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYI 90
DPE+ ++++ EK RQ +GLELI SENF S + ++A+GS + NKYSEGYPG RYYGG E +
Sbjct: 98 DPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVV 157
Query: 91 DMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHL 150
D E LCQ+RALEAF LDP +WGVNVQ SGSP+N YTALL+PHDRIM LDLP GGHL
Sbjct: 158 DEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAAYTALLQPHDRIMGLDLPDGGHL 217
Query: 151 SHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLY 210
+HGY +D K++SA SIFFE+MPY+LN TG IDYDQL +A LFRP+LI+AG SAYARL
Sbjct: 218 THGYMSDVKRVSATSIFFESMPYKLNPKTGLIDYDQLALTARLFRPRLIIAGTSAYARLI 277
Query: 211 DYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFF 270
DY R+R+VC++ KA +LADMAHISGLVAA VIPSPF++ADVVTTTTHK+LRG R +IF+
Sbjct: 278 DYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHADVVTTTTHKTLRGARSGLIFY 337
Query: 271 RKGVKEIN-KQGKE 283
RKG++ ++ K G+E
Sbjct: 338 RKGMRAVDPKTGRE 351
>UNIPROTKB|G4NDG3 [details] [associations]
symbol:MGG_00923 "Serine hydroxymethyltransferase"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] UniPathway:UPA00193 HAMAP:MF_00051
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CM001235 GO:GO:0008168
GO:GO:0043581 GO:GO:0006544 GO:GO:0035999 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 RefSeq:XP_003718036.1
ProteinModelPortal:G4NDG3 SMR:G4NDG3 EnsemblFungi:MGG_00923T0
GeneID:2674480 KEGG:mgr:MGG_00923 Uniprot:G4NDG3
Length = 482
Score = 901 (322.2 bits), Expect = 2.5e-90, P = 2.5e-90
Identities = 172/267 (64%), Positives = 211/267 (79%)
Query: 18 TWPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEG 77
T + L L DPE+A+I++HE RQ + + LI SEN TS +V A+GS M+NKYSEG
Sbjct: 11 THKEMLEKSLLDSDPEVAEIMKHEIQRQRESIILIASENVTSRAVFDALGSPMSNKYSEG 70
Query: 78 YPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHD 137
YPG RYYGGN++ID E LCQ+RAL AF + +KWGVNVQ LSGSP+N QVY A++ PH
Sbjct: 71 YPGKRYYGGNQHIDEIELLCQRRALAAFNVTEDKWGVNVQCLSGSPANLQVYQAIMPPHG 130
Query: 138 RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPK 197
R+M LDLPHGGHLSHGYQT +KISAVS +FETMPYR++ TG IDYDQLEK+ L+RPK
Sbjct: 131 RLMGLDLPHGGHLSHGYQTPQRKISAVSTYFETMPYRVDLETGIIDYDQLEKNVVLYRPK 190
Query: 198 LIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTH 257
++VAG SAY RL DY R+RK+ + A ++ D+AHISGLVA+GVIPSPF +ADVVTTTTH
Sbjct: 191 ILVAGTSAYCRLIDYARMRKIADLVGAYLVVDIAHISGLVASGVIPSPFLHADVVTTTTH 250
Query: 258 KSLRGPRGAMIFFRKGVKEIN-KQGKE 283
KSLRGPRGAMIFFR+GV+ ++ K GKE
Sbjct: 251 KSLRGPRGAMIFFRRGVRSVDPKTGKE 277
>DICTYBASE|DDB_G0277947 [details] [associations]
symbol:shmt1 "serine hydroxymethyltransferase 1"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0006563 "L-serine metabolic process"
evidence=IEA] [GO:0006544 "glycine metabolic process" evidence=IEA]
[GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=IEA;ISS] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0006730 "one-carbon metabolic process" evidence=IEA;ISS]
[GO:0005829 "cytosol" evidence=ISS] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0035999 "tetrahydrofolate
interconversion" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] UniPathway:UPA00193 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
dictyBase:DDB_G0277947 GO:GO:0005829 GO:GO:0045335 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 GenomeReviews:CM000152_GR EMBL:AAFI02000023
GO:GO:0006730 GO:GO:0006544 GO:GO:0035999 eggNOG:COG0112 KO:K00600
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 HSSP:P34897
RefSeq:XP_642026.1 ProteinModelPortal:Q54Z26 SMR:Q54Z26
STRING:Q54Z26 EnsemblProtists:DDB0230072 GeneID:8621237
KEGG:ddi:DDB_G0277947 OMA:LKEVASP ProtClustDB:PTZ00094
Uniprot:Q54Z26
Length = 457
Score = 900 (321.9 bits), Expect = 3.1e-90, P = 3.1e-90
Identities = 170/260 (65%), Positives = 212/260 (81%)
Query: 24 NAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARY 83
N PL+ VD EI +++ EK RQ+KGLELI SENFTS +VM+A+GS TNKY+EGYPG+RY
Sbjct: 7 NTPLKEVDNEIFELMNREKDRQFKGLELIASENFTSRAVMEALGSHFTNKYAEGYPGSRY 66
Query: 84 YGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALD 143
YGG E +D E+LCQKRAL+AFRLD KWGVNVQ SGSP+NF VYTALL+PHDRIM LD
Sbjct: 67 YGGTEVVDELETLCQKRALKAFRLDESKWGVNVQPYSGSPANFAVYTALLRPHDRIMGLD 126
Query: 144 LPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGA 203
LP GGHL+HGYQTD KKISA SIFFE+MPY++ + G IDY +LE++A LF+PKLI++GA
Sbjct: 127 LPSGGHLTHGYQTDKKKISASSIFFESMPYQIG-ADGLIDYQRLEENALLFKPKLIISGA 185
Query: 204 SAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGP 263
SAY R +DY+R+R + +K A ++ DMAH SGLVAA ++ SPF+Y DVVT+TTHK+LRGP
Sbjct: 186 SAYPREWDYKRMRAIADKVGAYLMCDMAHYSGLVAAQLLDSPFDYCDVVTSTTHKTLRGP 245
Query: 264 RGAMIFFRKGVKEINKQGKE 283
R +IFFR+G K ++ GKE
Sbjct: 246 RSGIIFFRRG-KRVDGNGKE 264
>MGI|MGI:98299 [details] [associations]
symbol:Shmt1 "serine hydroxymethyltransferase 1 (soluble)"
species:10090 "Mus musculus" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0004372 "glycine hydroxymethyltransferase
activity" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005829 "cytosol"
evidence=ISO] [GO:0006544 "glycine metabolic process" evidence=ISO]
[GO:0006545 "glycine biosynthetic process" evidence=ISO]
[GO:0006563 "L-serine metabolic process" evidence=IEA] [GO:0006565
"L-serine catabolic process" evidence=ISO] [GO:0006730 "one-carbon
metabolic process" evidence=IEA] [GO:0008732 "L-allo-threonine
aldolase activity" evidence=ISO] [GO:0009113 "purine nucleobase
biosynthetic process" evidence=ISO] [GO:0016597 "amino acid
binding" evidence=ISO] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0019264 "glycine biosynthetic process from
serine" evidence=ISO] [GO:0030170 "pyridoxal phosphate binding"
evidence=ISO] [GO:0042802 "identical protein binding" evidence=ISO]
[GO:0042803 "protein homodimerization activity" evidence=ISO]
[GO:0046655 "folic acid metabolic process" evidence=ISO]
[GO:0051262 "protein tetramerization" evidence=ISO] [GO:0051289
"protein homotetramerization" evidence=ISO] UniPathway:UPA00193
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
MGI:MGI:98299 GO:GO:0005829 GO:GO:0005739 GO:GO:0005634
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0016597 GO:GO:0051289
GO:GO:0009113 GO:GO:0035999 GO:GO:0046655 GO:GO:0006565
EMBL:AL596215 GO:GO:0008732 eggNOG:COG0112 KO:K00600 GO:GO:0004372
PANTHER:PTHR11680 HOGENOM:HOG000239405 GO:GO:0019264 CTD:6470
GeneTree:ENSGT00390000002762 HOVERGEN:HBG002807 OrthoDB:EOG42Z4Q2
ChiTaRS:SHMT1 EMBL:AF237702 EMBL:BC026055 EMBL:X94478 EMBL:X94479
IPI:IPI00118059 PIR:JC4959 RefSeq:NP_033197.2 UniGene:Mm.364956
PDB:1EJI PDBsum:1EJI ProteinModelPortal:P50431 SMR:P50431
STRING:P50431 PhosphoSite:P50431 REPRODUCTION-2DPAGE:P50431
SWISS-2DPAGE:P50431 PaxDb:P50431 PRIDE:P50431
Ensembl:ENSMUST00000018744 GeneID:20425 KEGG:mmu:20425
InParanoid:Q8R0X9 OMA:KEALEPW ChEMBL:CHEMBL4396
EvolutionaryTrace:P50431 NextBio:298438 Bgee:P50431
CleanEx:MM_SHMT1 Genevestigator:P50431
GermOnline:ENSMUSG00000020534 Uniprot:P50431
Length = 478
Score = 900 (321.9 bits), Expect = 3.1e-90, P = 3.1e-90
Identities = 171/275 (62%), Positives = 213/275 (77%)
Query: 13 EKNGVTWP---KQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSV 69
+++ W K L+ PL+ D E+ II+ E RQ GLELI SENF S +V++A+GS
Sbjct: 3 DRDATLWASHEKMLSQPLKDSDAEVYSIIKKESNRQRVGLELIASENFASRAVLEALGSC 62
Query: 70 MTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVY 129
+ NKYSEGYPG RYYGG E+ID E LCQKRAL+A+ LDP+ WGVNVQ SGSP+NF VY
Sbjct: 63 LNNKYSEGYPGQRYYGGTEFIDELEMLCQKRALQAYHLDPQCWGVNVQPYSGSPANFAVY 122
Query: 130 TALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEK 189
TAL++PH RIM LDLP GGHL+HG+ TD KKISA SIFFE+MPY++ TGYI+YDQLE+
Sbjct: 123 TALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMPYKVYPETGYINYDQLEE 182
Query: 190 SATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYA 249
+A+LF PKLI+AG S Y+R DY R+RK+ + A ++ADMAHISGLVAAGV+PSPFE+
Sbjct: 183 NASLFHPKLIIAGTSCYSRNLDYARLRKIADDNGAYLMADMAHISGLVAAGVVPSPFEHC 242
Query: 250 DVVTTTTHKSLRGPRGAMIFFRKGVKEIN-KQGKE 283
VVTTTTHK+LRG R MIF+RKGV+ ++ K GKE
Sbjct: 243 HVVTTTTHKTLRGCRAGMIFYRKGVRSVDPKTGKE 277
>UNIPROTKB|Q3SZ20 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase,
mitochondrial" species:9913 "Bos taurus" [GO:0005743 "mitochondrial
inner membrane" evidence=ISS] [GO:0005759 "mitochondrial matrix"
evidence=ISS] [GO:0042645 "mitochondrial nucleoid" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0035999
"tetrahydrofolate interconversion" evidence=IEA] [GO:0015630
"microtubule cytoskeleton" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0006563 "L-serine metabolic
process" evidence=IEA] [GO:0006544 "glycine metabolic process"
evidence=IEA] UniPathway:UPA00193 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 GO:GO:0015630 GO:GO:0005743 GO:GO:0003682
GO:GO:0042645 GO:GO:0008168 GO:GO:0006544 GO:GO:0035999
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 OMA:GKIDYED HOGENOM:HOG000239405
GeneTree:ENSGT00390000002762 HOVERGEN:HBG002807 EMBL:BC103242
IPI:IPI00718654 RefSeq:NP_001029454.1 UniGene:Bt.49106
ProteinModelPortal:Q3SZ20 SMR:Q3SZ20 STRING:Q3SZ20 PRIDE:Q3SZ20
Ensembl:ENSBTAT00000038244 GeneID:507197 KEGG:bta:507197 CTD:6472
InParanoid:Q3SZ20 OrthoDB:EOG4G4GQ7 NextBio:20867950 Uniprot:Q3SZ20
Length = 504
Score = 898 (321.2 bits), Expect = 5.1e-90, P = 5.1e-90
Identities = 168/254 (66%), Positives = 207/254 (81%)
Query: 31 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYI 90
DPE+ +++ EK RQ +GLELI SENF S + ++A+GS + NKYSEGYPG RYYGG E +
Sbjct: 53 DPEMWELLRREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVV 112
Query: 91 DMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHL 150
D E LCQ+RALEAF LDP +WGVNVQ SGSP+N YTALL+PHDRIM LDLP GGHL
Sbjct: 113 DEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAAYTALLQPHDRIMGLDLPDGGHL 172
Query: 151 SHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLY 210
+HGY +D K+ISA SIFFE+MPY+LN TG IDYDQL +A LF+P+LI+AG SAYARL
Sbjct: 173 THGYMSDVKRISATSIFFESMPYKLNPQTGLIDYDQLALTARLFKPRLIIAGTSAYARLI 232
Query: 211 DYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFF 270
DY R+R+VC++ KA +LADMAHISGLVAA VIPSPF++AD+VTTTTHK+LRG R +IF+
Sbjct: 233 DYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHADIVTTTTHKTLRGARSGLIFY 292
Query: 271 RKGVKEIN-KQGKE 283
RKGV+ ++ K G+E
Sbjct: 293 RKGVQAVDPKTGRE 306
>FB|FBgn0029823 [details] [associations]
symbol:CG3011 species:7227 "Drosophila melanogaster"
[GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=ISS] [GO:0006564 "L-serine biosynthetic process"
evidence=ISS] [GO:0005739 "mitochondrion" evidence=ISS] [GO:0030170
"pyridoxal phosphate binding" evidence=IEA] [GO:0006544 "glycine
metabolic process" evidence=IEA] [GO:0048149 "behavioral response
to ethanol" evidence=IMP] UniPathway:UPA00193 HAMAP:MF_00051
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:AE014298 GO:GO:0048149
GO:GO:0006544 GO:GO:0035999 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 GeneTree:ENSGT00390000002762 HSSP:P07511
OMA:VDLRESH UniGene:Dm.11053 GeneID:31524 KEGG:dme:Dmel_CG3011
FlyBase:FBgn0029823 GenomeRNAi:31524 NextBio:774055 EMBL:BT011432
RefSeq:NP_572278.1 SMR:Q9W457 IntAct:Q9W457 MINT:MINT-313386
STRING:Q9W457 EnsemblMetazoa:FBtr0070827 UCSC:CG3011-RA
InParanoid:Q9W457 Uniprot:Q9W457
Length = 537
Score = 895 (320.1 bits), Expect = 1.1e-89, P = 1.1e-89
Identities = 164/261 (62%), Positives = 206/261 (78%)
Query: 21 KQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPG 80
K L PL DPE+A++I+ EK RQ +GLE+I SENFTSV+V++++ S +TNKYSEGYPG
Sbjct: 75 KLLQTPLAQGDPELAELIKKEKERQREGLEMIASENFTSVAVLESLSSCLTNKYSEGYPG 134
Query: 81 ARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIM 140
RYYGGNEYID E L Q+R E F LD EKWGVNVQ SGSP+N VYT + +PHDRIM
Sbjct: 135 KRYYGGNEYIDRIELLAQQRGRELFNLDDEKWGVNVQPYSGSPANLAVYTGVCRPHDRIM 194
Query: 141 ALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIV 200
LDLP GGHL+HG+ T TKKISA SIFFE+MPY++N TG IDYD+L ++A FRP++I+
Sbjct: 195 GLDLPDGGHLTHGFFTPTKKISATSIFFESMPYKVNPETGIIDYDKLAEAAKNFRPQIII 254
Query: 201 AGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSL 260
AG S Y+RL DY R R++C+ A ++ADMAH++G+VAAG+IPSPFE+AD+VTTTTHK+L
Sbjct: 255 AGISCYSRLLDYARFRQICDDVGAYLMADMAHVAGIVAAGLIPSPFEWADIVTTTTHKTL 314
Query: 261 RGPRGAMIFFRKGVKEINKQG 281
RGPR +IFFRKGV+ G
Sbjct: 315 RGPRAGVIFFRKGVRSTKANG 335
>ZFIN|ZDB-GENE-040426-1558 [details] [associations]
symbol:shmt1 "serine hydroxymethyltransferase 1
(soluble)" species:7955 "Danio rerio" [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0006544 "glycine metabolic process" evidence=IEA]
[GO:0006563 "L-serine metabolic process" evidence=IEA] [GO:0004372
"glycine hydroxymethyltransferase activity" evidence=IEA;ISS;IDA]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006730
"one-carbon metabolic process" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0008168 "methyltransferase
activity" evidence=IEA] [GO:0032259 "methylation" evidence=IEA]
UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
ZFIN:ZDB-GENE-040426-1558 GO:GO:0005829 GO:GO:0005634 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 GO:GO:0006544 GO:GO:0035999 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 GeneTree:ENSGT00390000002762
EMBL:BX649440 IPI:IPI00994921 Ensembl:ENSDART00000124883
Bgee:F1QY03 Uniprot:F1QY03
Length = 504
Score = 895 (320.1 bits), Expect = 1.1e-89, P = 1.1e-89
Identities = 171/272 (62%), Positives = 211/272 (77%)
Query: 13 EKNGVTWPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTN 72
EK + K + PL DPE+ DII+ EK RQ GLELI SENFTS +V++A+GS M N
Sbjct: 34 EKTWESHNKMMLEPLSTNDPEVFDIIKKEKKRQTYGLELIASENFTSRAVLEALGSCMNN 93
Query: 73 KYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTAL 132
KYSEGYPG RYYGG E++D E LCQ RAL+ + LDPEKWGVNVQ SGSP+NF VYTA+
Sbjct: 94 KYSEGYPGQRYYGGTEHVDELERLCQDRALKVYGLDPEKWGVNVQPYSGSPANFAVYTAI 153
Query: 133 LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSAT 192
++PH RIM LDLP GGHL+HG+ TD KKISA S +MPY++N TGYIDY++LE++A
Sbjct: 154 VEPHGRIMGLDLPDGGHLTHGFMTDKKKISATS----SMPYKVNPETGYIDYNRLEENAR 209
Query: 193 LFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVV 252
LF P+LI+AG S Y+R DY R+RK+ ++ A +LADMAHISGLVAAGV+PSPFEY DVV
Sbjct: 210 LFHPRLIIAGTSCYSRNLDYSRLRKIADENGAYLLADMAHISGLVAAGVVPSPFEYCDVV 269
Query: 253 TTTTHKSLRGPRGAMIFFRKGVKEIN-KQGKE 283
+TTTHK+LRG R +IFFRKGV+ ++ K GKE
Sbjct: 270 STTTHKTLRGCRAGVIFFRKGVRSVDAKTGKE 301
>UNIPROTKB|E2RIV3 [details] [associations]
symbol:SHMT1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035999 "tetrahydrofolate interconversion"
evidence=IEA] [GO:0051262 "protein tetramerization" evidence=IEA]
[GO:0046655 "folic acid metabolic process" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0009113 "purine nucleobase biosynthetic process" evidence=IEA]
[GO:0006565 "L-serine catabolic process" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0030170 "pyridoxal phosphate binding" evidence=IEA] [GO:0006544
"glycine metabolic process" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA]
UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0005739
GO:GO:0005634 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0051262 GO:GO:0009113
GO:GO:0006544 GO:GO:0035999 GO:GO:0046655 GO:GO:0006565 KO:K00600
GO:GO:0004372 PANTHER:PTHR11680 CTD:6470
GeneTree:ENSGT00390000002762 OMA:VDLRESH EMBL:AAEX03003713
EMBL:AAEX03003714 RefSeq:XP_851819.2 Ensembl:ENSCAFT00000028996
GeneID:489536 KEGG:cfa:489536 Uniprot:E2RIV3
Length = 484
Score = 894 (319.8 bits), Expect = 1.4e-89, P = 1.4e-89
Identities = 173/280 (61%), Positives = 214/280 (76%)
Query: 8 AVYEKEKNGVTWP---KQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQ 64
AV K+ W K L PL+ D E+ +II+ E RQ GLELI SENFTS +V++
Sbjct: 4 AVNSTHKDTDLWSSHDKMLAEPLKDNDTEVYNIIKKESNRQRVGLELIASENFTSRAVLE 63
Query: 65 AVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPS 124
A+GS + NKYSEGYPG RYYGG E+ID E LCQKRAL+ + LDPE WGVNVQ SGSP+
Sbjct: 64 ALGSCLNNKYSEGYPGQRYYGGTEFIDELEILCQKRALQVYGLDPECWGVNVQPYSGSPA 123
Query: 125 NFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDY 184
NF VYTAL++PH RIM LDLP GGHL+HG+ TD KKISA SIFFE+MPY++N TGYI+Y
Sbjct: 124 NFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMPYKVNPETGYINY 183
Query: 185 DQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPS 244
DQLE++A LF PKLI+AG S Y+R DY R+RK+ + A ++ADMAHISGLVAAGV+PS
Sbjct: 184 DQLEENARLFHPKLIIAGTSCYSRNLDYARLRKIADDNGAYLMADMAHISGLVAAGVVPS 243
Query: 245 PFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEIN-KQGKE 283
PFE+ VV+TTTHK+LRG R +IF+R+GV+ ++ K GKE
Sbjct: 244 PFEHCHVVSTTTHKTLRGCRAGIIFYRRGVRSVDPKTGKE 283
>UNIPROTKB|P14519 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase,
mitochondrial" species:9986 "Oryctolagus cuniculus" [GO:0003682
"chromatin binding" evidence=ISS] [GO:0005743 "mitochondrial inner
membrane" evidence=ISS] [GO:0005759 "mitochondrial matrix"
evidence=ISS] [GO:0042645 "mitochondrial nucleoid" evidence=ISS]
UniPathway:UPA00193 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0005743 GO:GO:0003682 GO:GO:0042645 GO:GO:0006544
GO:GO:0035999 eggNOG:COG0112 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 HOGENOM:HOG000239405 HOVERGEN:HBG002807 CTD:6472
EMBL:X91902 RefSeq:NP_001075874.1 UniGene:Ocu.3292
ProteinModelPortal:P14519 SMR:P14519 STRING:P14519 PRIDE:P14519
GeneID:100009293 Uniprot:P14519
Length = 504
Score = 894 (319.8 bits), Expect = 1.4e-89, P = 1.4e-89
Identities = 168/258 (65%), Positives = 208/258 (80%)
Query: 27 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGG 86
L DPE+ ++++ EK RQ +GLELI SENF + ++A+GS + NKYSEGYPG RYYGG
Sbjct: 49 LSDTDPEMWELLQREKDRQCRGLELIASENFCIRAALEALGSCLNNKYSEGYPGKRYYGG 108
Query: 87 NEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPH 146
E +D E LCQ+RALEAF LDP +WGVNVQ SGSP+N YTALL+PHDRIM LDLP
Sbjct: 109 AEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAAYTALLQPHDRIMGLDLPD 168
Query: 147 GGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY 206
GGHL+HGY +D K++SA SIFFE+MPY+LN TG IDY+QL +A LFRP+LI+AG SAY
Sbjct: 169 GGHLTHGYMSDVKRVSATSIFFESMPYKLNPQTGLIDYEQLALTARLFRPRLIIAGTSAY 228
Query: 207 ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGA 266
ARL DY R+R+VC++ KA +LADMAHISGLVAA VIPSPF++ADVVTTTTHK+LRG R
Sbjct: 229 ARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHADVVTTTTHKTLRGARSG 288
Query: 267 MIFFRKGVKEIN-KQGKE 283
+IF+RKGV+ ++ K G+E
Sbjct: 289 LIFYRKGVRTVDPKTGQE 306
>TAIR|locus:2129251 [details] [associations]
symbol:SHM4 "serine hydroxymethyltransferase 4"
species:3702 "Arabidopsis thaliana" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA;ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0006544 "glycine metabolic process"
evidence=IEA;ISS] [GO:0006563 "L-serine metabolic process"
evidence=IEA;ISS] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=ISS;IDA] [GO:0046686
"response to cadmium ion" evidence=IEP] [GO:0016020 "membrane"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0005829 GO:GO:0005886
GO:GO:0009506 GO:GO:0046686 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:Z97335 GO:GO:0008168
GO:GO:0006544 GO:GO:0035999 EMBL:AL161537 eggNOG:COG0112 KO:K00600
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 HOGENOM:HOG000239405
OMA:LKEVASP HSSP:P07511 ProtClustDB:PLN03226 EMBL:AF361589
EMBL:AY093987 IPI:IPI00532971 PIR:B71400 RefSeq:NP_193129.1
UniGene:At.23373 ProteinModelPortal:O23254 SMR:O23254 STRING:O23254
PaxDb:O23254 PRIDE:O23254 ProMEX:O23254 EnsemblPlants:AT4G13930.1
GeneID:827027 KEGG:ath:AT4G13930 TAIR:At4g13930 InParanoid:O23254
PhylomeDB:O23254 Genevestigator:O23254 Uniprot:O23254
Length = 471
Score = 883 (315.9 bits), Expect = 2.0e-88, P = 2.0e-88
Identities = 169/257 (65%), Positives = 200/257 (77%)
Query: 24 NAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARY 83
N L VDPEI D+IE EK RQ +G+ELI SENFTS +V++A+GS +TNKYSEG PG RY
Sbjct: 9 NTSLVSVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGIPGNRY 68
Query: 84 YGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALD 143
YGGNE+ID E+LC+ RALEAF DP WGVNVQ SGSP+NF YTALL+PHDRIM LD
Sbjct: 69 YGGNEFIDEIENLCRSRALEAFHCDPAAWGVNVQPYSGSPANFAAYTALLQPHDRIMGLD 128
Query: 144 LPHGGHLSHGYQTDT-KKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 202
LP GGHL+HGY T KKISA SI+FE++PY++N +TGYIDYD+LE+ A FRPKL++ G
Sbjct: 129 LPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNFTTGYIDYDKLEEKALDFRPKLLICG 188
Query: 203 ASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRG 262
SAY R +DY R R + +K A++L DMAHISGLVAA +PFEY DVVTTTTHKSLRG
Sbjct: 189 GSAYPRDWDYARFRAIADKVGALLLCDMAHISGLVAAQEAANPFEYCDVVTTTTHKSLRG 248
Query: 263 PRGAMIFFRKGVKEINK 279
PR MIF+RKG K K
Sbjct: 249 PRAGMIFYRKGPKPPKK 265
>UNIPROTKB|Q5E9P9 [details] [associations]
symbol:SHMT1 "Serine hydroxymethyltransferase, cytosolic"
species:9913 "Bos taurus" [GO:0035999 "tetrahydrofolate
interconversion" evidence=IEA] [GO:0051262 "protein
tetramerization" evidence=IEA] [GO:0046655 "folic acid metabolic
process" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0009113 "purine nucleobase biosynthetic
process" evidence=IEA] [GO:0006565 "L-serine catabolic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0030170
"pyridoxal phosphate binding" evidence=IEA] [GO:0006544 "glycine
metabolic process" evidence=IEA] UniPathway:UPA00193
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
GO:GO:0005739 GO:GO:0005634 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0051262 GO:GO:0009113 GO:GO:0006544 GO:GO:0035999
GO:GO:0046655 GO:GO:0006565 eggNOG:COG0112 KO:K00600 GO:GO:0004372
PANTHER:PTHR11680 HOGENOM:HOG000239405 EMBL:BT020871 EMBL:BC112563
IPI:IPI00695792 RefSeq:NP_001015553.1 UniGene:Bt.88340
ProteinModelPortal:Q5E9P9 SMR:Q5E9P9 STRING:Q5E9P9 PRIDE:Q5E9P9
Ensembl:ENSBTAT00000022732 GeneID:509002 KEGG:bta:509002 CTD:6470
GeneTree:ENSGT00390000002762 HOVERGEN:HBG002807 InParanoid:Q5E9P9
OrthoDB:EOG42Z4Q2 NextBio:20868773 Uniprot:Q5E9P9
Length = 484
Score = 875 (313.1 bits), Expect = 1.4e-87, P = 1.4e-87
Identities = 165/264 (62%), Positives = 207/264 (78%)
Query: 21 KQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPG 80
K L PL+ D E+ +II+ E RQ GLELI SENF S +V++A+GS + NKYSEGYPG
Sbjct: 20 KMLAQPLKDNDVEVYNIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSEGYPG 79
Query: 81 ARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIM 140
RYYGG E+ID E LCQKRAL+ + LD + WGVNVQ SGSP+NF VYTAL++PH RIM
Sbjct: 80 QRYYGGTEFIDELEVLCQKRALQVYGLDSQCWGVNVQPYSGSPANFAVYTALVEPHGRIM 139
Query: 141 ALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIV 200
LDLP GGHL+HG+ TD KKISA SIFFE+MPY++N TGYI+YDQLE++A LF P+LI+
Sbjct: 140 GLDLPDGGHLTHGFMTDKKKISATSIFFESMPYKVNPDTGYINYDQLEENARLFHPRLII 199
Query: 201 AGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSL 260
AG S Y+R DY R+RK+ + A ++ADMAH+SGLVAAGV+PSPFE+ VV+TTTHK+L
Sbjct: 200 AGTSCYSRNLDYARLRKIADDNGAYLMADMAHVSGLVAAGVVPSPFEHCHVVSTTTHKTL 259
Query: 261 RGPRGAMIFFRKGVKEIN-KQGKE 283
RG R MIF+RKGV+ ++ K G+E
Sbjct: 260 RGCRAGMIFYRKGVRSVDPKTGRE 283
>DICTYBASE|DDB_G0291652 [details] [associations]
symbol:shmt2 "serine hydroxymethyltransferase 2"
species:44689 "Dictyostelium discoideum" [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0006563 "L-serine metabolic
process" evidence=IEA] [GO:0006544 "glycine metabolic process"
evidence=IEA] [GO:0004372 "glycine hydroxymethyltransferase
activity" evidence=IEA;ISS] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0006730 "one-carbon metabolic process"
evidence=IEA;ISS] [GO:0005759 "mitochondrial matrix" evidence=ISS]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0035999
"tetrahydrofolate interconversion" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] UniPathway:UPA00193
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
dictyBase:DDB_G0291652 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
EMBL:AAFI02000177 GenomeReviews:CM000155_GR GO:GO:0005759
GO:GO:0006730 GO:GO:0006544 GO:GO:0035999 eggNOG:COG0112 KO:K00600
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 OMA:DYLIDMD
HSSP:P34897 ProtClustDB:PTZ00094 RefSeq:XP_635129.1
ProteinModelPortal:Q54EW1 SMR:Q54EW1 STRING:Q54EW1 PRIDE:Q54EW1
EnsemblProtists:DDB0230073 GeneID:8628075 KEGG:ddi:DDB_G0291652
Uniprot:Q54EW1
Length = 481
Score = 874 (312.7 bits), Expect = 1.8e-87, P = 1.8e-87
Identities = 164/249 (65%), Positives = 199/249 (79%)
Query: 24 NAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARY 83
N + DPEI D++ EK RQ+ GLELI SENFTS +VM+++GS TNKY+EG PGARY
Sbjct: 31 NRSVSESDPEIYDLMMKEKQRQFTGLELIASENFTSRAVMESIGSCFTNKYAEGLPGARY 90
Query: 84 YGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALD 143
YGGNE +D E+LC KRALE F L+PE+WGVNVQ SGS +NF +T LLKPHDRIM LD
Sbjct: 91 YGGNEVVDQLENLCIKRALETFNLNPEEWGVNVQPYSGSTANFAAFTGLLKPHDRIMGLD 150
Query: 144 LPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGA 203
LP GGHL+HGYQTD KKISA SIFFE+MPY++NE TGY+DY+++E +A LFRPKL++AGA
Sbjct: 151 LPSGGHLTHGYQTDKKKISATSIFFESMPYQVNE-TGYVDYNKMEANAALFRPKLLIAGA 209
Query: 204 SAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGP 263
SAY R +DYER+RK+ +K A +L DMAHISG+VA SPF + DVVTTTTHK+LRGP
Sbjct: 210 SAYPREWDYERMRKIADKHGAYLLCDMAHISGMVAGKQAISPFLFCDVVTTTTHKTLRGP 269
Query: 264 RGAMIFFRK 272
R +IFFRK
Sbjct: 270 RAGLIFFRK 278
>TAIR|locus:2119545 [details] [associations]
symbol:EDA36 "EMBRYO SAC DEVELOPMENT ARREST 37"
species:3702 "Arabidopsis thaliana" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA;ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0006544 "glycine metabolic process"
evidence=IEA;ISS] [GO:0006563 "L-serine metabolic process"
evidence=IEA;ISS] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0010197 "polar nucleus fusion" evidence=IMP]
[GO:0009555 "pollen development" evidence=IMP] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009555 GO:GO:0008168
GO:GO:0006544 GO:GO:0010197 GO:GO:0035999 EMBL:AL035528
EMBL:AL161537 eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 HOGENOM:HOG000239405 HSSP:P07511
ProtClustDB:PLN03226 IPI:IPI00536506 PIR:T05258 RefSeq:NP_193125.1
UniGene:At.33326 ProteinModelPortal:Q9SVM4 SMR:Q9SVM4 STRING:Q9SVM4
EnsemblPlants:AT4G13890.1 GeneID:827024 KEGG:ath:AT4G13890
TAIR:At4g13890 InParanoid:Q9SVM4 OMA:MAHNSAL PhylomeDB:Q9SVM4
ArrayExpress:Q9SVM4 Genevestigator:Q9SVM4 Uniprot:Q9SVM4
Length = 470
Score = 857 (306.7 bits), Expect = 1.1e-85, P = 1.1e-85
Identities = 163/257 (63%), Positives = 196/257 (76%)
Query: 24 NAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARY 83
N L+ VDPEI D+IE EK RQ +G+ELI +ENFTSV+VM+A+GS +TNKYSEG PG RY
Sbjct: 9 NTHLDFVDPEIYDLIEKEKHRQCRGIELIAAENFTSVAVMEALGSCLTNKYSEGMPGNRY 68
Query: 84 YGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALD 143
YGG E+ID ESLC+ R+LEAF +PEKWGVNVQ SGSP+NF YTALL+PHDRIM LD
Sbjct: 69 YGGTEFIDEIESLCRSRSLEAFHCNPEKWGVNVQPYSGSPANFAAYTALLQPHDRIMGLD 128
Query: 144 LPHGGHLSHGYQTDT-KKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 202
LP GGH++HGY + K ISA SI+FE +PY+++ TGYIDYD+LE+ A FRPKLI+ G
Sbjct: 129 LPSGGHITHGYYSSGGKNISATSIYFENLPYKVDSKTGYIDYDKLEEKAMDFRPKLIICG 188
Query: 203 ASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRG 262
++Y R +DY R R V +K A +L DMAH S LVAA PFEY DVVTT+THKSLRG
Sbjct: 189 GTSYPREWDYARFRAVADKVGAFLLCDMAHNSALVAAQEAADPFEYCDVVTTSTHKSLRG 248
Query: 263 PRGAMIFFRKGVKEINK 279
PR MIF+RKG K K
Sbjct: 249 PRAGMIFYRKGPKPAKK 265
>SGD|S000000467 [details] [associations]
symbol:SHM1 "Mitochondrial serine hydroxymethyltransferase"
species:4932 "Saccharomyces cerevisiae" [GO:0035999
"tetrahydrofolate interconversion" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA;IDA;IMP] [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0006563 "L-serine metabolic
process" evidence=IEA] [GO:0006544 "glycine metabolic process"
evidence=IEA] [GO:0004372 "glycine hydroxymethyltransferase
activity" evidence=IEA;IMP] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0006730 "one-carbon metabolic process"
evidence=IEA;IGI;IMP] [GO:0009070 "serine family amino acid
biosynthetic process" evidence=IGI] [GO:0016740 "transferase
activity" evidence=IEA] UniPathway:UPA00193 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 SGD:S000000467
GO:GO:0005739 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:BK006936 EMBL:X70529
EMBL:Z36131 GO:GO:0006730 GO:GO:0006544 GO:GO:0035999
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 HOGENOM:HOG000239405 GeneTree:ENSGT00390000002762
OrthoDB:EOG4V1B88 GO:GO:0009070 EMBL:L22528 PIR:S29348
RefSeq:NP_009822.4 RefSeq:NP_009827.3 ProteinModelPortal:P37292
SMR:P37292 DIP:DIP-4952N IntAct:P37292 MINT:MINT-548725
STRING:P37292 PaxDb:P37292 PeptideAtlas:P37292 PRIDE:P37292
EnsemblFungi:YBR263W GeneID:852565 GeneID:852571 KEGG:sce:YBR263W
KEGG:sce:YBR268W CYGD:YBR263w OMA:GFNENDV
BioCyc:MetaCyc:YBR263W-MONOMER NextBio:971682 Genevestigator:P37292
GermOnline:YBR263W Uniprot:P37292
Length = 490
Score = 851 (304.6 bits), Expect = 4.9e-85, P = 4.9e-85
Identities = 159/262 (60%), Positives = 203/262 (77%)
Query: 23 LNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGAR 82
++ P+ DPE+ DI++ E+ RQ + LIPSENFTS +VM +GS + NKYSEGYPG R
Sbjct: 29 VSKPVSEGDPEMFDILQQERHRQKHSITLIPSENFTSKAVMDLLGSELQNKYSEGYPGER 88
Query: 83 YYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMAL 142
YYGGNE ID +ESLCQ RALE + LDP KWGVNVQ LSG+P+N VY+A++ +R+M L
Sbjct: 89 YYGGNEIIDKSESLCQARALELYGLDPAKWGVNVQPLSGAPANLYVYSAIMNVGERLMGL 148
Query: 143 DLPHGGHLSHGYQTDT-KKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA 201
DLP GGHLSHGYQ + IS +S +F++MPY ++ +TG IDYD L+ A FRPK+IVA
Sbjct: 149 DLPDGGHLSHGYQLKSGTPISFISKYFQSMPYHVDHTTGLIDYDNLQVLAKAFRPKVIVA 208
Query: 202 GASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLR 261
G SAY+RL DY R +++ A +++DMAHISGLVAA V+PSPFE++D+VTTTTHKSLR
Sbjct: 209 GTSAYSRLIDYARFKEISQGCGAYLMSDMAHISGLVAANVVPSPFEHSDIVTTTTHKSLR 268
Query: 262 GPRGAMIFFRKGVKEINKQGKE 283
GPRGAMIFFRKG+K + K+GKE
Sbjct: 269 GPRGAMIFFRKGIKSVTKKGKE 290
>TAIR|locus:2035937 [details] [associations]
symbol:SHM7 "serine hydroxymethyltransferase 7"
species:3702 "Arabidopsis thaliana" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA;ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0006544 "glycine metabolic process"
evidence=IEA;ISS] [GO:0006563 "L-serine metabolic process"
evidence=IEA;ISS] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0046686 "response to cadmium ion" evidence=IEP]
UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PROSITE:PS00096 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046686 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 GO:GO:0008168 GO:GO:0006544 GO:GO:0035999
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 HOGENOM:HOG000239405 OMA:IAKLQWA HSSP:P07511
EMBL:BT002738 IPI:IPI00548548 RefSeq:NP_564473.1 UniGene:At.23145
ProteinModelPortal:Q84WV0 STRING:Q84WV0 PaxDb:Q84WV0 PRIDE:Q84WV0
EnsemblPlants:AT1G36370.1 GeneID:840543 KEGG:ath:AT1G36370
TAIR:At1g36370 InParanoid:Q84WV0 PhylomeDB:Q84WV0
ProtClustDB:PLN02271 ArrayExpress:Q84WV0 Genevestigator:Q84WV0
Uniprot:Q84WV0
Length = 598
Score = 788 (282.4 bits), Expect = 2.3e-78, P = 2.3e-78
Identities = 148/257 (57%), Positives = 195/257 (75%)
Query: 26 PLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYG 85
P+ + DP+I +++E EK RQ +G+ELI SENF +VM+A+GS +TNKYSEG PGARYY
Sbjct: 137 PIHLADPDIHELMEKEKQRQVRGIELIASENFVCRAVMEALGSHLTNKYSEGMPGARYYT 196
Query: 86 GNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLP 145
GN+YID E+LC +RAL AF L+ +KWGVNVQ S + +NF VYT LL P +RIM LD P
Sbjct: 197 GNQYIDQIENLCIERALTAFGLESDKWGVNVQPYSCTSANFAVYTGLLLPGERIMGLDSP 256
Query: 146 HGGHLSHGYQTDT-KKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGAS 204
GGH+SHGY T KKISA SIFFE+ PY++N TGYIDYD+LE A +RPK+++ G S
Sbjct: 257 SGGHMSHGYCTPGGKKISAASIFFESFPYKVNPQTGYIDYDKLEDKALDYRPKILICGGS 316
Query: 205 AYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPR 264
+Y R +D+ R+R++ +K A+++ DMAHISGLVA +PF++ D+VT+TTHK LRGPR
Sbjct: 317 SYPRDWDFARVRQIADKCGAVLMCDMAHISGLVATKECSNPFDHCDIVTSTTHKGLRGPR 376
Query: 265 GAMIFFRKGVKEINKQG 281
G +IF+R+G K I KQG
Sbjct: 377 GGIIFYRRGPK-IRKQG 392
>TAIR|locus:2030581 [details] [associations]
symbol:SHM6 "serine hydroxymethyltransferase 6"
species:3702 "Arabidopsis thaliana" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA;ISS] [GO:0006544
"glycine metabolic process" evidence=IEA;ISS] [GO:0006563 "L-serine
metabolic process" evidence=IEA;ISS] [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] UniPathway:UPA00193 HAMAP:MF_00051
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PROSITE:PS00096 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0008168 EMBL:AC069252 GO:GO:0006544 GO:GO:0035999
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 HOGENOM:HOG000239405 HSSP:P07511
ProtClustDB:PLN02271 EMBL:AY125514 EMBL:BT004532 IPI:IPI00534805
RefSeq:NP_173621.1 UniGene:At.41627 ProteinModelPortal:Q9LM59
SMR:Q9LM59 STRING:Q9LM59 PaxDb:Q9LM59 PRIDE:Q9LM59
EnsemblPlants:AT1G22020.1 GeneID:838807 KEGG:ath:AT1G22020
TAIR:At1g22020 InParanoid:Q9LM59 OMA:IFGAIGK PhylomeDB:Q9LM59
Genevestigator:Q9LM59 Uniprot:Q9LM59
Length = 599
Score = 778 (278.9 bits), Expect = 2.7e-77, P = 2.7e-77
Identities = 145/253 (57%), Positives = 192/253 (75%)
Query: 24 NAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARY 83
N +E DPEI + +E EK RQ++G+ELI SENF +VM+A+GS +TNKYSEG PGARY
Sbjct: 139 NQSIEEADPEIHEFMEKEKQRQFRGIELIASENFVCRAVMEALGSHLTNKYSEGMPGARY 198
Query: 84 YGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALD 143
Y GN+YID E LCQ+RAL AF L+ EKWGVNVQ S + +NF V+T LL P +RIM LD
Sbjct: 199 YTGNQYIDQIEILCQERALAAFGLNHEKWGVNVQPYSCTSANFAVFTGLLMPGERIMGLD 258
Query: 144 LPHGGHLSHGYQTDT-KKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 202
P GGH+SHGY T KK+S SIFFE+ PY+++ TGYIDYD+LE+ A +RPK+++ G
Sbjct: 259 SPSGGHMSHGYYTPGGKKVSGASIFFESFPYKVDPRTGYIDYDKLEEKALDYRPKILICG 318
Query: 203 ASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRG 262
S+Y R +++ R R + +K A+++ DMA ISGLVAA P+PF+Y D+VT+TTHKSLRG
Sbjct: 319 GSSYPRDWEFPRFRHIADKCGAVLMFDMAQISGLVAAKESPNPFDYCDIVTSTTHKSLRG 378
Query: 263 PRGAMIFFRKGVK 275
PRG +IF+++G+K
Sbjct: 379 PRGGIIFYKRGLK 391
>UNIPROTKB|G3V4W5 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase,
mitochondrial" species:9606 "Homo sapiens" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0006544
"glycine metabolic process" evidence=IEA] [GO:0006563 "L-serine
metabolic process" evidence=IEA] [GO:0030170 "pyridoxal phosphate
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA]
InterPro:IPR001085 InterPro:IPR015421 Pfam:PF00464 GO:GO:0005739
GO:GO:0030170 Gene3D:3.40.640.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0015630 GO:GO:0006544 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 EMBL:AC137834 HGNC:HGNC:10852 ChiTaRS:SHMT2
ProteinModelPortal:G3V4W5 SMR:G3V4W5 Ensembl:ENST00000556689
ArrayExpress:G3V4W5 Bgee:G3V4W5 Uniprot:G3V4W5
Length = 237
Score = 537 (194.1 bits), Expect = 6.1e-66, Sum P(2) = 6.1e-66
Identities = 98/146 (67%), Positives = 119/146 (81%)
Query: 31 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYI 90
DPE+ ++++ EK RQ +GLELI SENF S + ++A+GS + NKYSEGYPG RYYGG E +
Sbjct: 53 DPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVV 112
Query: 91 DMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHL 150
D E LCQ+RALEAF LDP +WGVNVQ SGSP+N VYTALL+PHDRIM LDLP GGHL
Sbjct: 113 DEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHL 172
Query: 151 SHGYQTDTKKISAVSIFFETMPYRLN 176
+HGY +D K+ISA SIFFE+MPY+LN
Sbjct: 173 THGYMSDVKRISATSIFFESMPYKLN 198
Score = 152 (58.6 bits), Expect = 6.1e-66, Sum P(2) = 6.1e-66
Identities = 30/39 (76%), Positives = 36/39 (92%)
Query: 218 VCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTT 256
VC++ KA +LADMAHISGLVAA VIPSPF++AD+VTTTT
Sbjct: 199 VCDEVKAHLLADMAHISGLVAAKVIPSPFKHADIVTTTT 237
>UNIPROTKB|G3V5L0 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase,
mitochondrial" species:9606 "Homo sapiens" [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0005758
"mitochondrial intermembrane space" evidence=IEA] [GO:0005759
"mitochondrial matrix" evidence=IEA] [GO:0006564 "L-serine
biosynthetic process" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0008732
"L-allo-threonine aldolase activity" evidence=IEA] [GO:0016597
"amino acid binding" evidence=IEA] [GO:0019264 "glycine
biosynthetic process from serine" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0051289 "protein
homotetramerization" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=IDA]
InterPro:IPR001085 InterPro:IPR015421 Pfam:PF00464 GO:GO:0005739
GO:GO:0030170 Gene3D:3.40.640.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0015630 GO:GO:0005743 GO:GO:0005758 GO:GO:0005759
GO:GO:0008284 GO:GO:0016597 GO:GO:0051289 GO:GO:0006564
GO:GO:0008732 GO:GO:0004372 PANTHER:PTHR11680 GO:GO:0019264
EMBL:AC137834 HGNC:HGNC:10852 ChiTaRS:SHMT2
ProteinModelPortal:G3V5L0 SMR:G3V5L0 Ensembl:ENST00000554975
ArrayExpress:G3V5L0 Bgee:G3V5L0 Uniprot:G3V5L0
Length = 215
Score = 663 (238.4 bits), Expect = 4.1e-65, P = 4.1e-65
Identities = 123/184 (66%), Positives = 148/184 (80%)
Query: 31 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYI 90
DPE+ ++++ EK RQ +GLELI SENF S + ++A+GS + NKYSEGYPG RYYGG E +
Sbjct: 32 DPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVV 91
Query: 91 DMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHL 150
D E LCQ+RALEAF LDP +WGVNVQ SGSP+N VYTALL+PHDRIM LDLP GGHL
Sbjct: 92 DEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHL 151
Query: 151 SHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLY 210
+HGY +D K+ISA SIFFE+MPY+LN TG IDY+QL +A LFRP+LI+AG SAYARL
Sbjct: 152 THGYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARLFRPRLIIAGTSAYARLI 211
Query: 211 DYER 214
DY R
Sbjct: 212 DYAR 215
>GENEDB_PFALCIPARUM|PFL1720w [details] [associations]
symbol:PFL1720w "Serine
hydroxymethyltransferase" species:5833 "Plasmodium falciparum"
[GO:0005575 "cellular_component" evidence=ND] [GO:0006730
"one-carbon metabolic process" evidence=TAS] HAMAP:MF_00051
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
Pfam:PF00464 PIRSF:PIRSF000412 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
EMBL:AE014188 GO:GO:0008168 GO:GO:0006730 GO:GO:0006544 KO:K00600
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 HOGENOM:HOG000239405
OMA:IAKLQWA ProtClustDB:PTZ00094 HSSP:P07511 RefSeq:XP_001350750.1
ProteinModelPortal:Q8I566 EnsemblProtists:PFL1720w:mRNA
GeneID:811396 KEGG:pfa:PFL1720w EuPathDB:PlasmoDB:PF3D7_1235600
Uniprot:Q8I566
Length = 442
Score = 651 (234.2 bits), Expect = 7.6e-64, P = 7.6e-64
Identities = 124/249 (49%), Positives = 170/249 (68%)
Query: 24 NAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARY 83
N PL+ D E+ D++E EK RQ + + LI SEN T+ +V + +G ++NKYSEGYP RY
Sbjct: 4 NDPLQKYDKELFDLLEKEKNRQIETINLIASENLTNTAVRECLGDRISNKYSEGYPHKRY 63
Query: 84 YGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALD 143
YGGN+Y+D E LC KRALEAF + E+WGVNVQ LSGS +N Q AL+ +IM +
Sbjct: 64 YGGNDYVDKIEELCYKRALEAFNVSEEEWGVNVQPLSGSAANVQALYALVGVKGKIMGMH 123
Query: 144 LPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGA 203
L GGHL+HG+ + KK+S S FE+ Y+ N S GY+D + + A F+PK+I+ G
Sbjct: 124 LCSGGHLTHGFFDEKKKVSITSDLFESKLYKCN-SEGYVDMESVRNLALSFQPKVIICGY 182
Query: 204 SAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGP 263
++Y R DY+ R++C++ A + AD++HIS VA ++ +PF YADVVTTTTHK LRGP
Sbjct: 183 TSYPRDIDYKGFREICDEVNAYLFADISHISSFVACNLLNNPFTYADVVTTTTHKILRGP 242
Query: 264 RGAMIFFRK 272
R A+IFF K
Sbjct: 243 RSALIFFNK 251
>UNIPROTKB|Q8I566 [details] [associations]
symbol:PFL1720w "Serine hydroxymethyltransferase"
species:36329 "Plasmodium falciparum 3D7" [GO:0005575
"cellular_component" evidence=ND] [GO:0006730 "one-carbon metabolic
process" evidence=TAS] HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 Pfam:PF00464
PIRSF:PIRSF000412 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
EMBL:AE014188 GO:GO:0008168 GO:GO:0006730 GO:GO:0006544 KO:K00600
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 HOGENOM:HOG000239405
OMA:IAKLQWA ProtClustDB:PTZ00094 HSSP:P07511 RefSeq:XP_001350750.1
ProteinModelPortal:Q8I566 EnsemblProtists:PFL1720w:mRNA
GeneID:811396 KEGG:pfa:PFL1720w EuPathDB:PlasmoDB:PF3D7_1235600
Uniprot:Q8I566
Length = 442
Score = 651 (234.2 bits), Expect = 7.6e-64, P = 7.6e-64
Identities = 124/249 (49%), Positives = 170/249 (68%)
Query: 24 NAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARY 83
N PL+ D E+ D++E EK RQ + + LI SEN T+ +V + +G ++NKYSEGYP RY
Sbjct: 4 NDPLQKYDKELFDLLEKEKNRQIETINLIASENLTNTAVRECLGDRISNKYSEGYPHKRY 63
Query: 84 YGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALD 143
YGGN+Y+D E LC KRALEAF + E+WGVNVQ LSGS +N Q AL+ +IM +
Sbjct: 64 YGGNDYVDKIEELCYKRALEAFNVSEEEWGVNVQPLSGSAANVQALYALVGVKGKIMGMH 123
Query: 144 LPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGA 203
L GGHL+HG+ + KK+S S FE+ Y+ N S GY+D + + A F+PK+I+ G
Sbjct: 124 LCSGGHLTHGFFDEKKKVSITSDLFESKLYKCN-SEGYVDMESVRNLALSFQPKVIICGY 182
Query: 204 SAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGP 263
++Y R DY+ R++C++ A + AD++HIS VA ++ +PF YADVVTTTTHK LRGP
Sbjct: 183 TSYPRDIDYKGFREICDEVNAYLFADISHISSFVACNLLNNPFTYADVVTTTTHKILRGP 242
Query: 264 RGAMIFFRK 272
R A+IFF K
Sbjct: 243 RSALIFFNK 251
>TIGR_CMR|GSU_1607 [details] [associations]
symbol:GSU_1607 "serine hydroxymethyltransferase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 ProtClustDB:PRK00011 HOGENOM:HOG000239405
RefSeq:NP_952658.1 ProteinModelPortal:Q74CR5 SMR:Q74CR5
PRIDE:Q74CR5 GeneID:2685603 KEGG:gsu:GSU1607 PATRIC:22026061
OMA:IAKLQWA BioCyc:GSUL243231:GH27-1559-MONOMER Uniprot:Q74CR5
Length = 415
Score = 616 (221.9 bits), Expect = 3.9e-60, P = 3.9e-60
Identities = 126/253 (49%), Positives = 170/253 (67%)
Query: 27 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGG 86
LE DP++A+ I HE RQ LELI SENF S +V++A GSVMTNKY+EGYPG RYYGG
Sbjct: 4 LETFDPQVAEAIRHETERQEYNLELIASENFVSEAVLEAQGSVMTNKYAEGYPGKRYYGG 63
Query: 87 NEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPH 146
++D+ E+L +RA E F D NVQ SGS +N VY ++LKP D I+ ++L H
Sbjct: 64 CHHVDVVENLAIERAKELFGADH----ANVQPHSGSQANMAVYFSVLKPGDTILGMNLSH 119
Query: 147 GGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY 206
GGHL+HG ++ FF +PY +++ T ID++++E+ A +PK+IV GASAY
Sbjct: 120 GGHLTHG-----SPVNFSGRFFNVVPYGVSQETETIDFNEVERLALEHKPKMIVVGASAY 174
Query: 207 ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGA 266
R D+ R + +K A+++ DMAHI+GLVAAG+ PSP YA+ VTTTTHK+LRGPRG
Sbjct: 175 PRTIDFAAFRIIADKVGAVIMVDMAHIAGLVAAGLHPSPVPYAEFVTTTTHKTLRGPRGG 234
Query: 267 MIFFRKG-VKEIN 278
MI R+ K +N
Sbjct: 235 MILCREEYAKTLN 247
>UNIPROTKB|P0A825 [details] [associations]
symbol:glyA species:83333 "Escherichia coli K-12"
[GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=IEA;IDA;IMP] [GO:0008270 "zinc ion binding" evidence=IDA]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0035999
"tetrahydrofolate interconversion" evidence=IEA] [GO:0006546
"glycine catabolic process" evidence=IMP] [GO:0016020 "membrane"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006730
"one-carbon metabolic process" evidence=IEA] [GO:0006565 "L-serine
catabolic process" evidence=IDA] [GO:0019264 "glycine biosynthetic
process from serine" evidence=IDA;IMP] [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA;IDA] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005829
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0016020 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0008270 GO:GO:0035999 GO:GO:0006546 GO:GO:0006565
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
PANTHER:PTHR11680 ProtClustDB:PRK00011 OMA:GKIDYED EMBL:V00283
EMBL:J01620 PIR:A00559 RefSeq:NP_417046.1 RefSeq:YP_490779.1
PDB:1DFO PDB:1EQB PDB:3G8M PDBsum:1DFO PDBsum:1EQB PDBsum:3G8M
ProteinModelPortal:P0A825 SMR:P0A825 DIP:DIP-36205N IntAct:P0A825
MINT:MINT-7293373 SWISS-2DPAGE:P0A825 PaxDb:P0A825 PRIDE:P0A825
EnsemblBacteria:EBESCT00000003405 EnsemblBacteria:EBESCT00000017377
GeneID:12932320 GeneID:947022 KEGG:ecj:Y75_p2504 KEGG:eco:b2551
PATRIC:32120501 EchoBASE:EB0403 EcoGene:EG10408
BioCyc:EcoCyc:GLYOHMETRANS-MONOMER BioCyc:ECOL316407:JW2535-MONOMER
BioCyc:MetaCyc:GLYOHMETRANS-MONOMER EvolutionaryTrace:P0A825
Genevestigator:P0A825 GO:GO:0019264 Uniprot:P0A825
Length = 417
Score = 595 (214.5 bits), Expect = 6.6e-58, P = 6.6e-58
Identities = 121/250 (48%), Positives = 167/250 (66%)
Query: 31 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYI 90
D E+ +E EK RQ + +ELI SEN+TS VMQA GS +TNKY+EGYPG RYYGG EY+
Sbjct: 12 DAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYV 71
Query: 91 DMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHL 150
D+ E L RA E F D NVQ SGS +NF VYTALL+P D ++ ++L HGGHL
Sbjct: 72 DIVEQLAIDRAKELFGADY----ANVQPHSGSQANFAVYTALLEPGDTVLGMNLAHGGHL 127
Query: 151 SHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLY 210
+HG ++ + +PY + ++TG+IDY LEK A +PK+I+ G SAY+ +
Sbjct: 128 THG-----SPVNFSGKLYNIVPYGI-DATGHIDYADLEKQAKEHKPKMIIGGFSAYSGVV 181
Query: 211 DYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFF 270
D+ ++R++ + A + DMAH++GLVAAGV P+P +A VVTTTTHK+L GPRG +I
Sbjct: 182 DWAKMREIADSIGAYLFVDMAHVAGLVAAGVYPNPVPHAHVVTTTTHKTLAGPRGGLILA 241
Query: 271 RKGVKEINKQ 280
+ G +E+ K+
Sbjct: 242 KGGSEELYKK 251
>TIGR_CMR|CPS_2477 [details] [associations]
symbol:CPS_2477 "serine hydroxymethyltransferase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 ProtClustDB:PRK00011
RefSeq:YP_269193.1 ProteinModelPortal:Q481S6 SMR:Q481S6
STRING:Q481S6 PRIDE:Q481S6 GeneID:3520009 KEGG:cps:CPS_2477
PATRIC:21468023 BioCyc:CPSY167879:GI48-2540-MONOMER Uniprot:Q481S6
Length = 417
Score = 582 (209.9 bits), Expect = 1.6e-56, P = 1.6e-56
Identities = 121/251 (48%), Positives = 164/251 (65%)
Query: 31 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYI 90
D I +E E RQ +ELI SEN+TS VMQA GS +TNKY+EGYPG RYYGG E++
Sbjct: 12 DDSIWQAMEQEDKRQQDHVELIASENYTSARVMQAQGSQLTNKYAEGYPGKRYYGGCEHV 71
Query: 91 DMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHL 150
D+ E L RA E F D NVQ SGS +N V+ ALLKP + ++ + L HGGHL
Sbjct: 72 DVIEQLAIDRAKELFGADY----ANVQPHSGSQANAAVFMALLKPGETVLGMSLAHGGHL 127
Query: 151 SHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLY 210
+HG K+S + + Y LNE+TG IDY+++E+ A +PK+I+AG SAY+R+
Sbjct: 128 THG-----SKVSFSGKIYNAVQYGLNEATGEIDYEEVERLAKEHQPKMIIAGFSAYSRVV 182
Query: 211 DYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFF 270
D++R R + + A + DMAH++GLVAAG+ P+P ADVVTTTTHK+LRGPRG +I
Sbjct: 183 DWQRFRDIADSIGAWLFVDMAHVAGLVAAGLYPNPVPIADVVTTTTHKTLRGPRGGLILA 242
Query: 271 RKG---VKEIN 278
++ K++N
Sbjct: 243 KQNDELAKKLN 253
>TIGR_CMR|CHY_2557 [details] [associations]
symbol:CHY_2557 "serine hydroxymethyltransferase"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=ISS] [GO:0006544 "glycine metabolic process" evidence=ISS]
[GO:0006553 "lysine metabolic process" evidence=ISS] [GO:0006563
"L-serine metabolic process" evidence=ISS] [GO:0006566 "threonine
metabolic process" evidence=ISS] [GO:0006730 "one-carbon metabolic
process" evidence=ISS] [GO:0006760 "folic acid-containing compound
metabolic process" evidence=ISS] [GO:0015947 "methane metabolic
process" evidence=ISS] UniPathway:UPA00193 HAMAP:MF_00051
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
UniPathway:UPA00288 GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 RefSeq:YP_361350.1 ProteinModelPortal:Q3A934
SMR:Q3A934 STRING:Q3A934 GeneID:3728195 KEGG:chy:CHY_2557
PATRIC:21278163 HOGENOM:HOG000239403 OMA:GLLSDPM
BioCyc:CHYD246194:GJCN-2556-MONOMER Uniprot:Q3A934
Length = 421
Score = 579 (208.9 bits), Expect = 3.3e-56, P = 3.3e-56
Identities = 117/247 (47%), Positives = 170/247 (68%)
Query: 23 LNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGAR 82
LN L+ VDPEI + +E E +RQ + +ELI SENF S +VM+A+GS +TNKY+EG PG R
Sbjct: 4 LNLRLKDVDPEIFEAMEKELSRQREKIELIASENFVSRAVMEAMGSHLTNKYAEGLPGKR 63
Query: 83 YYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMAL 142
YYGG EY+D+ E+L ++RA + F + VNVQ SG+ +N Y A L+P D ++ +
Sbjct: 64 YYGGCEYVDVVENLARERAKKLFGAEH----VNVQPHSGAQANMAAYMAFLEPGDTVLGM 119
Query: 143 DLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 202
+L HGGHL+HG ++ + + Y + T I+Y+++ + A +PK+IVAG
Sbjct: 120 NLAHGGHLTHG-----SPVNFSGKLYNFVSYGVEPDTEKINYEKVFELAYKHKPKMIVAG 174
Query: 203 ASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRG 262
ASAY R+ D++ ++++ ++ A ++ DMAHI+GLVAAG+ PSP YADVVTTTTHK+LRG
Sbjct: 175 ASAYPRVIDFKHLKEIADEVGAYLMVDMAHIAGLVAAGLHPSPIPYADVVTTTTHKTLRG 234
Query: 263 PRGAMIF 269
PRG +IF
Sbjct: 235 PRGGVIF 241
>TIGR_CMR|DET_0436 [details] [associations]
symbol:DET_0436 "Serine hydroxymethyltransferase"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0004372
"glycine hydroxymethyltransferase activity" evidence=ISS]
[GO:0006545 "glycine biosynthetic process" evidence=ISS]
[GO:0006730 "one-carbon metabolic process" evidence=ISS]
UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288
GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CP000027
GenomeReviews:CP000027_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 ProtClustDB:PRK00011
RefSeq:YP_181180.1 ProteinModelPortal:Q3Z9B9 SMR:Q3Z9B9
STRING:Q3Z9B9 PRIDE:Q3Z9B9 GeneID:3230231 KEGG:det:DET0436
PATRIC:21607941 OMA:ERFRAIC BioCyc:DETH243164:GJNF-436-MONOMER
Uniprot:Q3Z9B9
Length = 415
Score = 578 (208.5 bits), Expect = 4.2e-56, P = 4.2e-56
Identities = 121/246 (49%), Positives = 156/246 (63%)
Query: 27 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGG 86
L+ DP + + I E R + ++LI SEN+TS +V++A GSV TNKY+EGYPG RYY G
Sbjct: 4 LKTSDPAVYNAIMQETTRLKETIDLIASENYTSKAVLEAQGSVFTNKYAEGYPGKRYYAG 63
Query: 87 NEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPH 146
EY D E L RA F + NVQ SG+ +N Y A++KP D IM L L H
Sbjct: 64 CEYADAIEELAIDRAKTLFHAEH----ANVQPHSGAQANMAAYFAMVKPGDTIMGLTLSH 119
Query: 147 GGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY 206
GGHL+HG K + + + Y LN T IDYD LEK A RP+LIV GASAY
Sbjct: 120 GGHLTHG-----SKANFTGKLYHVIEYGLNAETERIDYDNLEKLALEHRPRLIVTGASAY 174
Query: 207 ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGA 266
R+ D+ER R +C+K A ++ D+AHI+GLVAAG+ PSP YADVVT+T+HK+LRGPRG
Sbjct: 175 PRILDFERFRAICDKVDAKLMVDIAHIAGLVAAGLHPSPVPYADVVTSTSHKTLRGPRGG 234
Query: 267 MIFFRK 272
I ++
Sbjct: 235 FILCKE 240
>TIGR_CMR|CPS_4031 [details] [associations]
symbol:CPS_4031 "serine hydroxymethyltransferase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 ProtClustDB:PRK00011
RefSeq:YP_270689.1 ProteinModelPortal:Q47WY2 SMR:Q47WY2
STRING:Q47WY2 GeneID:3519081 KEGG:cps:CPS_4031 PATRIC:21470941
OMA:VKINAQV BioCyc:CPSY167879:GI48-4044-MONOMER Uniprot:Q47WY2
Length = 417
Score = 577 (208.2 bits), Expect = 5.3e-56, P = 5.3e-56
Identities = 121/251 (48%), Positives = 162/251 (64%)
Query: 31 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYI 90
D I +E E RQ +ELI SEN+TS VMQA GS +TNKY+EGYPG RYYGG E++
Sbjct: 12 DDSIWQAMEQEDKRQQDHVELIASENYTSARVMQAQGSQLTNKYAEGYPGKRYYGGCEHV 71
Query: 91 DMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHL 150
D+ E L RA E F D NVQ SGS +N V+ ALLKP + ++ + L HGGHL
Sbjct: 72 DVIEQLAIDRAKELFGADY----ANVQPHSGSQANAAVFMALLKPGETVLGMSLAHGGHL 127
Query: 151 SHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLY 210
+HG K+S + + Y LNE TG IDYD++ + A +PK+I+AG SAY+R+
Sbjct: 128 THG-----SKVSFSGKIYNAVQYGLNEVTGEIDYDEVARLAKEHQPKMIIAGFSAYSRVV 182
Query: 211 DYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFF 270
D++R R + + A + DMAH++GLVAAG+ P+P ADVVTTTTHK+LRGPRG +I
Sbjct: 183 DWQRFRDIADSIGAWLFVDMAHVAGLVAAGLYPNPVPIADVVTTTTHKTLRGPRGGLILA 242
Query: 271 RKG---VKEIN 278
++ K++N
Sbjct: 243 KQNDELAKKLN 253
>UNIPROTKB|Q9KTG1 [details] [associations]
symbol:glyA1 "Serine hydroxymethyltransferase 1"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=ISS] [GO:0006545 "glycine biosynthetic process"
evidence=ISS] [GO:0006730 "one-carbon metabolic process"
evidence=ISS] UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288
GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006730 GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 ProtClustDB:PRK00011 PIR:H82258
RefSeq:NP_230588.2 ProteinModelPortal:Q9KTG1 SMR:Q9KTG1
PRIDE:Q9KTG1 DNASU:2614161 GeneID:2614161 KEGG:vch:VC0941
PATRIC:20080986 OMA:GKIDYED Uniprot:Q9KTG1
Length = 416
Score = 576 (207.8 bits), Expect = 6.8e-56, P = 6.8e-56
Identities = 118/250 (47%), Positives = 166/250 (66%)
Query: 31 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYI 90
DPE+ I+ E RQ + +ELI SEN+TS VMQA GS +TNKY+EGYPG RYYGG EY+
Sbjct: 12 DPELYAAIQEETLRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYV 71
Query: 91 DMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHL 150
D AE+L RA + F + NVQ SGS +N VY ALL P D ++ + L HGGHL
Sbjct: 72 DKAEALAIDRACQLFGCEY----ANVQPHSGSQANSAVYMALLNPGDTVLGMSLAHGGHL 127
Query: 151 SHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLY 210
+HG ++ + +PY ++E+ G I+YD++E A +PK+I+ G SAY+++
Sbjct: 128 THG-----SPVNFSGKHYNVIPYGIDEA-GQINYDEMEALALEHKPKMIIGGFSAYSQIV 181
Query: 211 DYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFF 270
D++R+R++ +K A + DMAH++GL+AAGV PSP +A VVTTTTHK+L GPRG +I
Sbjct: 182 DWKRMREIADKVGAYLFVDMAHVAGLIAAGVYPSPVPFAHVVTTTTHKTLAGPRGGLILS 241
Query: 271 RKGVKEINKQ 280
G +E+ K+
Sbjct: 242 NAG-EEMYKK 250
>TIGR_CMR|VC_0941 [details] [associations]
symbol:VC_0941 "serine hydroxymethyltransferase"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006730 GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 ProtClustDB:PRK00011 PIR:H82258
RefSeq:NP_230588.2 ProteinModelPortal:Q9KTG1 SMR:Q9KTG1
PRIDE:Q9KTG1 DNASU:2614161 GeneID:2614161 KEGG:vch:VC0941
PATRIC:20080986 OMA:GKIDYED Uniprot:Q9KTG1
Length = 416
Score = 576 (207.8 bits), Expect = 6.8e-56, P = 6.8e-56
Identities = 118/250 (47%), Positives = 166/250 (66%)
Query: 31 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYI 90
DPE+ I+ E RQ + +ELI SEN+TS VMQA GS +TNKY+EGYPG RYYGG EY+
Sbjct: 12 DPELYAAIQEETLRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYV 71
Query: 91 DMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHL 150
D AE+L RA + F + NVQ SGS +N VY ALL P D ++ + L HGGHL
Sbjct: 72 DKAEALAIDRACQLFGCEY----ANVQPHSGSQANSAVYMALLNPGDTVLGMSLAHGGHL 127
Query: 151 SHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLY 210
+HG ++ + +PY ++E+ G I+YD++E A +PK+I+ G SAY+++
Sbjct: 128 THG-----SPVNFSGKHYNVIPYGIDEA-GQINYDEMEALALEHKPKMIIGGFSAYSQIV 181
Query: 211 DYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFF 270
D++R+R++ +K A + DMAH++GL+AAGV PSP +A VVTTTTHK+L GPRG +I
Sbjct: 182 DWKRMREIADKVGAYLFVDMAHVAGLIAAGVYPSPVPFAHVVTTTTHKTLAGPRGGLILS 241
Query: 271 RKGVKEINKQ 280
G +E+ K+
Sbjct: 242 NAG-EEMYKK 250
>TIGR_CMR|SO_3471 [details] [associations]
symbol:SO_3471 "serine hydroxymethyltransferase"
species:211586 "Shewanella oneidensis MR-1" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 KO:K00600 OMA:AICAKFP GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 ProtClustDB:PRK00011 HOGENOM:HOG000239403
RefSeq:NP_719020.1 ProteinModelPortal:Q8EBN8 SMR:Q8EBN8
GeneID:1171147 KEGG:son:SO_3471 PATRIC:23526638 Uniprot:Q8EBN8
Length = 417
Score = 574 (207.1 bits), Expect = 1.1e-55, P = 1.1e-55
Identities = 116/250 (46%), Positives = 168/250 (67%)
Query: 31 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYI 90
DPE+ + I++E RQ + +ELI SEN+TS VMQA GS +TNKY+EGYPG RYYGG EY+
Sbjct: 12 DPELFNAIQNETLRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYV 71
Query: 91 DMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHL 150
D+ E+L +RA + F NVQ SGS +N VY ALLKP D ++ ++L HGGHL
Sbjct: 72 DVVETLAIERAKQLFGATY----ANVQPHSGSQANSAVYMALLKPGDTVLGMNLAHGGHL 127
Query: 151 SHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLY 210
+HG ++ + +PY ++ES G IDYD++E+ A +PK+++ G SAY+ +
Sbjct: 128 THG-----SPVNFSGRLYNIIPYGIDES-GKIDYDEMERLAVEHKPKMMIGGFSAYSGIV 181
Query: 211 DYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFF 270
D+ R+R++ +K A + DMAH++GL+AAGV P+P +A VVT+TTHK+L GPRG +I
Sbjct: 182 DWARMREIADKIGAYLFVDMAHVAGLIAAGVYPNPVPHAHVVTSTTHKTLAGPRGGIILS 241
Query: 271 RKGVKEINKQ 280
+E+ K+
Sbjct: 242 AADDEELYKK 251
>TIGR_CMR|CJE_0451 [details] [associations]
symbol:CJE_0451 "serine hydroxymethyltransferase"
species:195099 "Campylobacter jejuni RM1221" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 ProtClustDB:PRK13034 HOGENOM:HOG000239405
RefSeq:YP_178470.1 ProteinModelPortal:Q5HW65 SMR:Q5HW65
STRING:Q5HW65 PRIDE:Q5HW65 GeneID:3231213 KEGG:cjr:CJE0451
PATRIC:20042602 OMA:ALATWIC BioCyc:CJEJ195099:GJC0-456-MONOMER
Uniprot:Q5HW65
Length = 414
Score = 571 (206.1 bits), Expect = 2.3e-55, P = 2.3e-55
Identities = 119/242 (49%), Positives = 165/242 (68%)
Query: 27 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGG 86
LE+ D EI D+ E RQ +GLE+I SENFT VM+ +GS++TNKY+EGYPG RYYGG
Sbjct: 3 LEMFDKEIFDLTNKELERQCEGLEMIASENFTLPEVMEVMGSILTNKYAEGYPGKRYYGG 62
Query: 87 NEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPH 146
E++D E+L +R + F K+ NVQ SGS +N VY AL+ P D+I+ +DL H
Sbjct: 63 CEFVDEIETLAIERCKKLFNC---KFA-NVQPNSGSQANQGVYAALINPGDKILGMDLSH 118
Query: 147 GGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY 206
GGHL+HG K+S+ +E+ Y + E G IDY+++ + A +PKLIV GASAY
Sbjct: 119 GGHLTHG-----AKVSSSGKMYESCFYGV-ELDGRIDYEKVREIAKKEKPKLIVCGASAY 172
Query: 207 ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGA 266
AR+ D+ + R++ ++ A + AD+AHI+GLV AG PSPF +A VV++TTHK+LRGPRG
Sbjct: 173 ARVIDFAKFREIADEVGAYLFADIAHIAGLVVAGEHPSPFPHAHVVSSTTHKTLRGPRGG 232
Query: 267 MI 268
+I
Sbjct: 233 II 234
>TIGR_CMR|CBU_1419 [details] [associations]
symbol:CBU_1419 "serine hydroxymethyltransferase"
species:227377 "Coxiella burnetii RSA 493" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 ProtClustDB:PRK00011
RefSeq:NP_820403.1 ProteinModelPortal:Q83BT3 SMR:Q83BT3
PRIDE:Q83BT3 GeneID:1209325 KEGG:cbu:CBU_1419 PATRIC:17931591
OMA:SKELTGW BioCyc:CBUR227377:GJ7S-1406-MONOMER Uniprot:Q83BT3
Length = 419
Score = 560 (202.2 bits), Expect = 3.4e-54, P = 3.4e-54
Identities = 118/254 (46%), Positives = 164/254 (64%)
Query: 27 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGG 86
+E D E+A I E+ RQ +ELI SEN+ S V++ GSV+TNKY+EGYPG RYYGG
Sbjct: 8 VESFDSELAGAIRDERRRQEHHVELIASENYVSPRVLELQGSVLTNKYAEGYPGRRYYGG 67
Query: 87 NEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPH 146
E++D+AE L RA E F D NVQ SGS +N + Y AL+ P D ++A+DL H
Sbjct: 68 CEFVDIAEQLAIDRAKELFGADY----ANVQPHSGSQANAEAYMALMNPGDTLLAMDLSH 123
Query: 147 GGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY 206
GGHL+HG +S F++ + Y LN + G IDY+Q + A +PK+I+AG SA+
Sbjct: 124 GGHLTHG-----SPVSFSGKFYKAVHYGLN-AHGDIDYEQAAQLAQEHKPKVILAGFSAF 177
Query: 207 ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGA 266
+ + D++R R++ + A + D+AH++GLVAAGV PSP + ADV TTTTHK+LRGPR
Sbjct: 178 SGIVDWQRFREIADSVNAYFMTDIAHVAGLVAAGVYPSPVQIADVTTTTTHKTLRGPRAG 237
Query: 267 MIFFRKGVKEINKQ 280
+I K E+ K+
Sbjct: 238 LIL-AKANPELEKR 250
>TIGR_CMR|ECH_0311 [details] [associations]
symbol:ECH_0311 "serine hydroxymethyltransferase"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0004372
"glycine hydroxymethyltransferase activity" evidence=ISS]
[GO:0006545 "glycine biosynthetic process" evidence=ISS]
[GO:0006730 "one-carbon metabolic process" evidence=ISS]
UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288
GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 ProtClustDB:PRK00011 HSSP:P34897
RefSeq:YP_507132.1 ProteinModelPortal:Q2GHF1 SMR:Q2GHF1
STRING:Q2GHF1 PRIDE:Q2GHF1 GeneID:3927190 KEGG:ech:ECH_0311
PATRIC:20576127 OMA:LELTHQF BioCyc:ECHA205920:GJNR-311-MONOMER
Uniprot:Q2GHF1
Length = 420
Score = 558 (201.5 bits), Expect = 5.5e-54, P = 5.5e-54
Identities = 120/258 (46%), Positives = 168/258 (65%)
Query: 23 LNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGAR 82
L+ L+ VD E+ + I E RQ GL+LI SENF S +V+QA GS+ TNKY+EGYPG R
Sbjct: 6 LDDDLQEVDAEVFNCISGELNRQNSGLQLIASENFVSKAVLQAQGSIFTNKYAEGYPGKR 65
Query: 83 YYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMAL 142
YY G + D+ E+L +R F K+ NVQ SGS +N V+ ALLKP D ++ +
Sbjct: 66 YYCGCHFADIVENLAIERLCRLFGC---KFA-NVQPHSGSQANQGVFAALLKPGDTVIGM 121
Query: 143 DLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 202
L GGHL+HG IS +F + Y+++ TG ID D++EK A P LI+AG
Sbjct: 122 SLDCGGHLTHG---SAPSISGK--WFNAVQYQVDRDTGLIDMDEIEKLAVEHNPSLIIAG 176
Query: 203 ASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRG 262
+S+Y R+ D++R R++ +K A +LAD+AH +GL+AAG PSP EYA V+T+TTHK+LRG
Sbjct: 177 SSSYPRVIDFKRFREIADKVGAYLLADIAHYAGLIAAGEFPSPVEYAHVITSTTHKTLRG 236
Query: 263 PRGAMIFFRKGVKEINKQ 280
PRGA+I ++I+K+
Sbjct: 237 PRGAVIM--TNYEDIHKK 252
>TIGR_CMR|SPO_1572 [details] [associations]
symbol:SPO_1572 "serine hydroxymethyltransferase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 ProtClustDB:PRK00011
RefSeq:YP_166813.1 RefSeq:YP_168148.1 ProteinModelPortal:Q5LPA8
SMR:Q5LPA8 GeneID:3193885 GeneID:3194742 KEGG:sil:SPO1572
KEGG:sil:SPO2940 PATRIC:23376465 OMA:QIDFARM Uniprot:Q5LPA8
Length = 431
Score = 543 (196.2 bits), Expect = 2.1e-52, P = 2.1e-52
Identities = 117/238 (49%), Positives = 150/238 (63%)
Query: 31 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYI 90
DPE+ I E RQ +ELI SEN S +VMQA GSVMTNKY+EGYPG RYYGG +Y+
Sbjct: 19 DPELFGAITSELGRQRDEIELIASENIVSAAVMQAQGSVMTNKYAEGYPGRRYYGGCQYV 78
Query: 91 DMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHL 150
D+AE+L +RA + F NVQ SGS +N V+ AL+KP D I+ + L GGHL
Sbjct: 79 DIAENLAIERAKQLFGCG----FANVQPNSGSQANQGVFQALIKPGDTILGMSLDAGGHL 134
Query: 151 SHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLY 210
+HG + +F + Y + + +DYDQ+E A RPKLI+AG SA R
Sbjct: 135 THGAAPNQS-----GKWFNAVQYGVRQQDNLLDYDQVEALAKEHRPKLIIAGGSAIPRQI 189
Query: 211 DYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMI 268
D+ R+R++ + A + DMAH +GLVAAG PSPF +A V TTTTHK+LRGPRG MI
Sbjct: 190 DFARMREIADMVGAYLHVDMAHFAGLVAAGEHPSPFPHAHVATTTTHKTLRGPRGGMI 247
>TIGR_CMR|SPO_2940 [details] [associations]
symbol:SPO_2940 "serine hydroxymethyltransferase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 ProtClustDB:PRK00011
RefSeq:YP_166813.1 RefSeq:YP_168148.1 ProteinModelPortal:Q5LPA8
SMR:Q5LPA8 GeneID:3193885 GeneID:3194742 KEGG:sil:SPO1572
KEGG:sil:SPO2940 PATRIC:23376465 OMA:QIDFARM Uniprot:Q5LPA8
Length = 431
Score = 543 (196.2 bits), Expect = 2.1e-52, P = 2.1e-52
Identities = 117/238 (49%), Positives = 150/238 (63%)
Query: 31 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYI 90
DPE+ I E RQ +ELI SEN S +VMQA GSVMTNKY+EGYPG RYYGG +Y+
Sbjct: 19 DPELFGAITSELGRQRDEIELIASENIVSAAVMQAQGSVMTNKYAEGYPGRRYYGGCQYV 78
Query: 91 DMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHL 150
D+AE+L +RA + F NVQ SGS +N V+ AL+KP D I+ + L GGHL
Sbjct: 79 DIAENLAIERAKQLFGCG----FANVQPNSGSQANQGVFQALIKPGDTILGMSLDAGGHL 134
Query: 151 SHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLY 210
+HG + +F + Y + + +DYDQ+E A RPKLI+AG SA R
Sbjct: 135 THGAAPNQS-----GKWFNAVQYGVRQQDNLLDYDQVEALAKEHRPKLIIAGGSAIPRQI 189
Query: 211 DYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMI 268
D+ R+R++ + A + DMAH +GLVAAG PSPF +A V TTTTHK+LRGPRG MI
Sbjct: 190 DFARMREIADMVGAYLHVDMAHFAGLVAAGEHPSPFPHAHVATTTTHKTLRGPRGGMI 247
>TIGR_CMR|BA_5558 [details] [associations]
symbol:BA_5558 "serine hydroxymethyltransferase"
species:198094 "Bacillus anthracis str. Ames" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 ProtClustDB:PRK00011 RefSeq:NP_847716.1
RefSeq:YP_022227.1 RefSeq:YP_031404.1 ProteinModelPortal:Q81JY4
SMR:Q81JY4 PRIDE:Q81JY4 DNASU:1085246
EnsemblBacteria:EBBACT00000011325 EnsemblBacteria:EBBACT00000016380
EnsemblBacteria:EBBACT00000022066 GeneID:1085246 GeneID:2820074
GeneID:2851919 KEGG:ban:BA_5558 KEGG:bar:GBAA_5558 KEGG:bat:BAS5165
HOGENOM:HOG000239405 OMA:CREAHAK
BioCyc:BANT260799:GJAJ-5240-MONOMER
BioCyc:BANT261594:GJ7F-5419-MONOMER Uniprot:Q81JY4
Length = 413
Score = 539 (194.8 bits), Expect = 5.6e-52, P = 5.6e-52
Identities = 115/250 (46%), Positives = 162/250 (64%)
Query: 31 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYI 90
D ++ IE E RQ +ELI SENF S +VM+A GSV+TNKY+EGYPG RYYGG E++
Sbjct: 8 DEKVFAAIEAELGRQRSKIELIASENFVSEAVMEAQGSVLTNKYAEGYPGKRYYGGCEHV 67
Query: 91 DMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHL 150
D+ E + + R E F + VNVQ SG+ +N VY +L+ D ++ ++L HGGHL
Sbjct: 68 DVVEDIARDRVKEIFGAEH----VNVQPHSGAQANMAVYFTILEQGDTVLGMNLSHGGHL 123
Query: 151 SHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLY 210
+HG + S V F + Y ++ + I+YD + A +PKLIVAGASAY R+
Sbjct: 124 THGSPVN---FSGVQYNF--VEYGVDAESHCINYDDVLAKAKEHKPKLIVAGASAYPRVI 178
Query: 211 DYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFF 270
D++R R++ ++ A ++ DMAHI+GLVAAG+ P+P +A VTTTTHK+LRGPRG MI
Sbjct: 179 DFKRFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPHAHFVTTTTHKTLRGPRGGMILC 238
Query: 271 RKG-VKEINK 279
+ K+I+K
Sbjct: 239 EEQFAKQIDK 248
>UNIPROTKB|G3V540 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase,
mitochondrial" species:9606 "Homo sapiens" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0006544
"glycine metabolic process" evidence=IEA] [GO:0006563 "L-serine
metabolic process" evidence=IEA] [GO:0030170 "pyridoxal phosphate
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA]
InterPro:IPR001085 InterPro:IPR015421 Pfam:PF00464 GO:GO:0005739
GO:GO:0030170 Gene3D:3.40.640.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0015630 GO:GO:0006544 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 EMBL:AC137834 HGNC:HGNC:10852 ChiTaRS:SHMT2
SMR:G3V540 Ensembl:ENST00000553837 Ensembl:ENST00000554604
Uniprot:G3V540
Length = 192
Score = 537 (194.1 bits), Expect = 9.2e-52, P = 9.2e-52
Identities = 98/146 (67%), Positives = 119/146 (81%)
Query: 31 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYI 90
DPE+ ++++ EK RQ +GLELI SENF S + ++A+GS + NKYSEGYPG RYYGG E +
Sbjct: 32 DPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVV 91
Query: 91 DMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHL 150
D E LCQ+RALEAF LDP +WGVNVQ SGSP+N VYTALL+PHDRIM LDLP GGHL
Sbjct: 92 DEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHL 151
Query: 151 SHGYQTDTKKISAVSIFFETMPYRLN 176
+HGY +D K+ISA SIFFE+MPY+LN
Sbjct: 152 THGYMSDVKRISATSIFFESMPYKLN 177
>UNIPROTKB|O53615 [details] [associations]
symbol:glyA2 "Serine hydroxymethyltransferase 2"
species:1773 "Mycobacterium tuberculosis" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0006544 "glycine metabolic
process" evidence=IDA] [GO:0006563 "L-serine metabolic process"
evidence=IDA] [GO:0030170 "pyridoxal phosphate binding"
evidence=IDA] [GO:0042803 "protein homodimerization activity"
evidence=IPI] UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288
GO:GO:0005886 GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
EMBL:BX842572 GO:GO:0006544 GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 ProtClustDB:PRK00011 BRENDA:2.1.2.1
PIR:G70848 RefSeq:NP_214584.1 RefSeq:NP_334486.1
RefSeq:YP_006513385.1 ProteinModelPortal:O53615 SMR:O53615
PRIDE:O53615 EnsemblBacteria:EBMYCT00000002193
EnsemblBacteria:EBMYCT00000071276 GeneID:13316049 GeneID:886983
GeneID:922815 KEGG:mtc:MT0076 KEGG:mtu:Rv0070c KEGG:mtv:RVBD_0070c
PATRIC:18121891 TubercuList:Rv0070c OMA:DYLIDMD Uniprot:O53615
Length = 425
Score = 535 (193.4 bits), Expect = 1.5e-51, P = 1.5e-51
Identities = 113/246 (45%), Positives = 153/246 (62%)
Query: 23 LNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGAR 82
LN L DP+IA +I+ E RQ GLE+I SEN+ ++VMQA GSV+TNKY+EGYPG R
Sbjct: 4 LNDSLTAFDPDIAALIDGELRRQESGLEMIASENYAPLAVMQAQGSVLTNKYAEGYPGRR 63
Query: 83 YYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMAL 142
YYGG E++D E L R F + NVQ SG+ +N ALL P D I+ L
Sbjct: 64 YYGGCEFVDGVEQLAIDRVKALFGAEY----ANVQPHSGATANAATMHALLNPGDTILGL 119
Query: 143 DLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 202
L HGGHL+HG +I+ + Y +++ +D D + ++A RPK+I+AG
Sbjct: 120 SLAHGGHLTHGM-----RINFSGKLYHATAYEVSKEDYLVDMDAVAEAARTHRPKMIIAG 174
Query: 203 ASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRG 262
SAY R D+ R R + ++ A+++ DMAH +GLVAAGV PSP +A VVT+TTHK+L G
Sbjct: 175 WSAYPRQLDFARFRAIADEVDAVLMVDMAHFAGLVAAGVHPSPVPHAHVVTSTTHKTLGG 234
Query: 263 PRGAMI 268
PRG +I
Sbjct: 235 PRGGII 240
>TIGR_CMR|APH_0154 [details] [associations]
symbol:APH_0154 "serine hydroxymethyltransferase"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006544
"glycine metabolic process" evidence=ISS] [GO:0006730 "one-carbon
metabolic process" evidence=ISS] UniPathway:UPA00193 HAMAP:MF_00051
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
UniPathway:UPA00288 GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 ProtClustDB:PRK00011
RefSeq:YP_504778.1 HSSP:P34897 ProteinModelPortal:Q2GLH3 SMR:Q2GLH3
STRING:Q2GLH3 GeneID:3930419 KEGG:aph:APH_0154 PATRIC:20948876
OMA:FKAYAHQ BioCyc:APHA212042:GHPM-189-MONOMER Uniprot:Q2GLH3
Length = 425
Score = 535 (193.4 bits), Expect = 1.5e-51, P = 1.5e-51
Identities = 115/250 (46%), Positives = 161/250 (64%)
Query: 31 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYI 90
D E+A+ + E RQ L++I SENF S +V+QA GSV+TNKY+EGYPG+RYY G +
Sbjct: 14 DAEVAECLSAEYKRQNTSLQMIASENFVSRAVLQAQGSVLTNKYAEGYPGSRYYCGCSEV 73
Query: 91 DMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHL 150
D+AE+L +R + F K+ NVQ SGS +N QVY ALLKP D ++ + L GGHL
Sbjct: 74 DVAETLAVERLCKLFGC---KYA-NVQPHSGSQANQQVYMALLKPGDTVLGMSLDSGGHL 129
Query: 151 SHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLY 210
+HG + +S +F +PY + T +D ++E+ A +P LI+AGAS+Y R
Sbjct: 130 THGAGPN---VSGK--WFNAVPYNVRRDTNLLDMGEIEEIALRVKPNLIIAGASSYPRRI 184
Query: 211 DYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFF 270
D++ R + +K A LAD+AH SGL+A G P+PF YA VVT+TTHK+LRGPRG +I
Sbjct: 185 DFKAFRAIADKVGAYFLADIAHYSGLIAGGQYPTPFGYAHVVTSTTHKTLRGPRGGVIMT 244
Query: 271 RKGVKEINKQ 280
+EI+K+
Sbjct: 245 DD--EEIHKK 252
>TIGR_CMR|CPS_0728 [details] [associations]
symbol:CPS_0728 "serine hydroxymethyltransferase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0035999 GO:GO:0006545
RefSeq:YP_267478.1 ProteinModelPortal:Q488N6 SMR:Q488N6
STRING:Q488N6 PRIDE:Q488N6 GeneID:3519747 KEGG:cps:CPS_0728
PATRIC:21464771 eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600
OMA:AICAKFP BioCyc:CPSY167879:GI48-815-MONOMER GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 Uniprot:Q488N6
Length = 419
Score = 531 (192.0 bits), Expect = 4.0e-51, P = 4.0e-51
Identities = 108/238 (45%), Positives = 154/238 (64%)
Query: 31 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYI 90
DPE+ + + +E RQ + +ELI SEN+ S V++A GS +TNKY+EGYPG RYYGG EY+
Sbjct: 12 DPELFEAMSNEVVRQEEHIELIASENYCSPRVLEAQGSQLTNKYAEGYPGKRYYGGCEYV 71
Query: 91 DMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHL 150
D+AE L RA E F NVQ +GS +N V+ AL+ P +++ + L HGGHL
Sbjct: 72 DIAEQLAIDRAKELFGATY----ANVQPHAGSQANAAVFQALVTPGGKVLGMSLAHGGHL 127
Query: 151 SHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLY 210
+HG S S +E Y L+ TG IDY++LE+ A +P++I+ G SA++ +
Sbjct: 128 THGSHVS---FSGKS--YEAFQYGLHPETGDIDYEELERLAVEHKPEMIIGGFSAFSGVV 182
Query: 211 DYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMI 268
D+ R+R + +K A DMAH++GL+AAG+ P+P +A VVTTTTHK+L GPRG +I
Sbjct: 183 DWARMRTIADKVGAYFFVDMAHVAGLIAAGLYPNPVPHAHVVTTTTHKTLAGPRGGLI 240
>TIGR_CMR|NSE_0218 [details] [associations]
symbol:NSE_0218 "serine hydroxymethyltransferase"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0004372
"glycine hydroxymethyltransferase activity" evidence=ISS]
[GO:0006545 "glycine biosynthetic process" evidence=ISS]
[GO:0006730 "one-carbon metabolic process" evidence=ISS]
UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288
GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CP000237
GenomeReviews:CP000237_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 HSSP:P34897 RefSeq:YP_506113.1
ProteinModelPortal:Q2GEI3 SMR:Q2GEI3 STRING:Q2GEI3 PRIDE:Q2GEI3
GeneID:3932003 KEGG:nse:NSE_0218 PATRIC:22680535 OMA:INEVIQG
ProtClustDB:CLSK2528038 BioCyc:NSEN222891:GHFU-249-MONOMER
Uniprot:Q2GEI3
Length = 419
Score = 525 (189.9 bits), Expect = 1.7e-50, P = 1.7e-50
Identities = 110/254 (43%), Positives = 156/254 (61%)
Query: 27 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGG 86
+ VDP +A II+ E +RQ K L+LI SENF S +V++A GSV TNKY+EGYPG RYY G
Sbjct: 13 ISAVDPAVARIIDGEVSRQRKHLQLIASENFASAAVLEAQGSVFTNKYAEGYPGKRYYCG 72
Query: 87 NEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPH 146
EY D E L +R + F NVQ SGS +N V+ ALL P D ++ L
Sbjct: 73 CEYADQIERLAIERVCKLFGCSY----ANVQPHSGSQANQAVFLALLNPGDTVLGFSLAS 128
Query: 147 GGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY 206
GGHL+HG ++ +F + Y + ID D++ A P++I+AGASAY
Sbjct: 129 GGHLTHG-----ASVNLSGKWFNAVHYNVRRDNFEIDMDEVRDLAKKHSPRMIIAGASAY 183
Query: 207 ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGA 266
++ D++ R++ ++ A +L D+AH +GL+AAG PSPF Y DV+T+TTHK+LRGPRGA
Sbjct: 184 SKYIDFKSFREIADEVGAYLLGDVAHYAGLIAAGEYPSPFPYVDVMTSTTHKTLRGPRGA 243
Query: 267 MIFFRKG--VKEIN 278
++ +++IN
Sbjct: 244 IVLTNSEELIRKIN 257
>UNIPROTKB|O53441 [details] [associations]
symbol:glyA1 "Serine hydroxymethyltransferase 1"
species:1773 "Mycobacterium tuberculosis" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IDA] [GO:0005618 "cell
wall" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0006544 "glycine metabolic process" evidence=IDA] [GO:0006563
"L-serine metabolic process" evidence=IDA] [GO:0030170 "pyridoxal
phosphate binding" evidence=IDA] [GO:0042783 "active evasion of
host immune response" evidence=IMP] [GO:0042803 "protein
homodimerization activity" evidence=IPI] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005886
GO:GO:0005737 GO:GO:0005618 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
EMBL:BX842575 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0006544 GO:GO:0035999 GO:GO:0042783
GO:GO:0006545 eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 PIR:C70896
RefSeq:NP_335569.1 RefSeq:YP_006514462.1 PDB:1LXB PDB:3H7F
PDBsum:1LXB PDBsum:3H7F ProteinModelPortal:O53441 SMR:O53441
PRIDE:O53441 EnsemblBacteria:EBMYCT00000001613
EnsemblBacteria:EBMYCT00000071670 GeneID:13319665 GeneID:924979
KEGG:mtc:MT1125 KEGG:mtu:Rv1093 KEGG:mtv:RVBD_1093 PATRIC:18124236
TubercuList:Rv1093 OMA:PETHRID ProtClustDB:PRK00011 BRENDA:2.1.2.1
EvolutionaryTrace:O53441 Uniprot:O53441
Length = 426
Score = 524 (189.5 bits), Expect = 2.2e-50, P = 2.2e-50
Identities = 114/257 (44%), Positives = 164/257 (63%)
Query: 23 LNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGAR 82
++APL VDP+IA+++ E RQ LE+I SENF +V+QA GSV+TNKY+EG PG R
Sbjct: 1 MSAPLAEVDPDIAELLAKELGRQRDTLEMIASENFVPRAVLQAQGSVLTNKYAEGLPGRR 60
Query: 83 YYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMAL 142
YYGG E++D+ E+L + RA F + NVQ SG+ +N V AL+ P +R++ L
Sbjct: 61 YYGGCEHVDVVENLARDRAKALFGAE----FANVQPHSGAQANAAVLHALMSPGERLLGL 116
Query: 143 DLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 202
DL +GGHL+HG +++ +E Y ++ +T ID D + +A FRPK+I+AG
Sbjct: 117 DLANGGHLTHGM-----RLNFSGKLYENGFYGVDPATHLIDMDAVRATALEFRPKVIIAG 171
Query: 203 ASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRG 262
SAY R+ D+ R + ++ A +L DMAH +GLVAAG+ PSP +ADVV+TT HK+L G
Sbjct: 172 WSAYPRVLDFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPVPHADVVSTTVHKTLGG 231
Query: 263 PRGAMIFFRKG-VKEIN 278
R +I ++ K IN
Sbjct: 232 GRSGLIVGKQQYAKAIN 248
>UNIPROTKB|G3V2Y4 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase" species:9606
"Homo sapiens" [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0004372 "glycine hydroxymethyltransferase
activity" evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005758 "mitochondrial intermembrane space"
evidence=IEA] [GO:0005759 "mitochondrial matrix" evidence=IEA]
[GO:0006564 "L-serine biosynthetic process" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0008732 "L-allo-threonine aldolase activity"
evidence=IEA] [GO:0016597 "amino acid binding" evidence=IEA]
[GO:0019264 "glycine biosynthetic process from serine"
evidence=IEA] [GO:0042802 "identical protein binding" evidence=IEA]
[GO:0051289 "protein homotetramerization" evidence=IEA] [GO:0035999
"tetrahydrofolate interconversion" evidence=IEA]
UniPathway:UPA00193 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464 PROSITE:PS00096
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0005743 GO:GO:0005758
GO:GO:0005759 GO:GO:0008284 GO:GO:0016597 GO:GO:0051289
GO:GO:0035999 GO:GO:0006564 GO:GO:0008732 GO:GO:0004372
PANTHER:PTHR11680 GO:GO:0019264 EMBL:AC137834 HGNC:HGNC:10852
ChiTaRS:SHMT2 ProteinModelPortal:G3V2Y4 SMR:G3V2Y4
Ensembl:ENST00000555634 ArrayExpress:G3V2Y4 Bgee:G3V2Y4
Uniprot:G3V2Y4
Length = 234
Score = 523 (189.2 bits), Expect = 2.8e-50, P = 2.8e-50
Identities = 99/145 (68%), Positives = 122/145 (84%)
Query: 140 MALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLI 199
M LDLP GGHL+HGY +D K+ISA SIFFE+MPY+LN TG IDY+QL +A LFRP+LI
Sbjct: 1 MGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARLFRPRLI 60
Query: 200 VAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKS 259
+AG SAYARL DY R+R+VC++ KA +LADMAHISGLVAA VIPSPF++AD+VTTTTHK+
Sbjct: 61 IAGTSAYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHADIVTTTTHKT 120
Query: 260 LRGPRGAMIFFRKGVKEIN-KQGKE 283
LRG R +IF+RKGVK ++ K G+E
Sbjct: 121 LRGARSGLIFYRKGVKAVDPKTGRE 145
>TIGR_CMR|CPS_3844 [details] [associations]
symbol:CPS_3844 "serine hydroxymethyltransferase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 ProtClustDB:PRK13034
RefSeq:YP_270506.1 ProteinModelPortal:Q47XG4 SMR:Q47XG4
STRING:Q47XG4 GeneID:3518659 KEGG:cps:CPS_3844 PATRIC:21470595
OMA:LQSRDPV BioCyc:CPSY167879:GI48-3861-MONOMER Uniprot:Q47XG4
Length = 431
Score = 517 (187.1 bits), Expect = 1.2e-49, P = 1.2e-49
Identities = 115/257 (44%), Positives = 161/257 (62%)
Query: 24 NAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARY 83
++ L D + I+ E+ARQ + +ELI SEN S +VM+A G+V+TNKY+EGYPG RY
Sbjct: 15 SSDLSSTDGAVQVAIDLEEARQNQQIELIASENIVSKAVMEAQGTVLTNKYAEGYPGRRY 74
Query: 84 YGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALD 143
YGG E++D+ E+L RA F+ D VNVQ SG+ +N V AL+KP D I+ +
Sbjct: 75 YGGCEHVDLVETLAIDRAKLIFKAD----FVNVQPHSGAQANGAVMLALVKPGDTILGMS 130
Query: 144 LPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGA 203
L GGHL+HG K + +F + Y + + IDYDQ+ A +PK+I+AG
Sbjct: 131 LDAGGHLTHG-----AKPAQSGKWFNAIHYGVRKDDMRIDYDQVLALAIEHQPKMIIAGG 185
Query: 204 SAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGP 263
SA R D+ + R++ ++ AI++ DMAHI+GLVAAG +P +ADVVTTTTHK+LRGP
Sbjct: 186 SAIPRQIDFAKFREIADQVGAILMVDMAHIAGLVAAGAHQNPLPFADVVTTTTHKTLRGP 245
Query: 264 RGAMIFFRKG--VKEIN 278
RG +I K+IN
Sbjct: 246 RGGLILTNNPDVAKKIN 262
>UNIPROTKB|B4DPM9 [details] [associations]
symbol:SHMT1 "Serine hydroxymethyltransferase" species:9606
"Homo sapiens" [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0004372 "glycine hydroxymethyltransferase
activity" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0008732 "L-allo-threonine
aldolase activity" evidence=IEA] [GO:0016597 "amino acid binding"
evidence=IEA] [GO:0019264 "glycine biosynthetic process from
serine" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0051289 "protein homotetramerization"
evidence=IEA] [GO:0035999 "tetrahydrofolate interconversion"
evidence=IEA] UniPathway:UPA00193 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0005829
GO:GO:0005739 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0016597 GO:GO:0051289
GO:GO:0008168 GO:GO:0035999 EMBL:AC127537 GO:GO:0008732
GO:GO:0004372 PANTHER:PTHR11680 GO:GO:0019264 HOVERGEN:HBG002807
UniGene:Hs.513987 UniGene:Hs.636044 HGNC:HGNC:10850 ChiTaRS:SHMT1
EMBL:AL353997 EMBL:AK298415 IPI:IPI01015924 SMR:B4DPM9
STRING:B4DPM9 Ensembl:ENST00000539052 Uniprot:B4DPM9
Length = 345
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 96/145 (66%), Positives = 119/145 (82%)
Query: 140 MALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLI 199
M LDLP GGHL+HG+ TD KKISA SIFFE+MPY++N TGYI+YDQLE++A LF PKLI
Sbjct: 1 MGLDLPDGGHLTHGFMTDKKKISATSIFFESMPYKVNPDTGYINYDQLEENARLFHPKLI 60
Query: 200 VAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKS 259
+AG S Y+R +Y R+RK+ ++ A ++ADMAHISGLVAAGV+PSPFE+ VVTTTTHK+
Sbjct: 61 IAGTSCYSRNLEYARLRKIADENGAYLMADMAHISGLVAAGVVPSPFEHCHVVTTTTHKT 120
Query: 260 LRGPRGAMIFFRKGVKEIN-KQGKE 283
LRG R MIF+RKGVK ++ K GKE
Sbjct: 121 LRGCRAGMIFYRKGVKSVDPKTGKE 145
>UNIPROTKB|J3KRZ5 [details] [associations]
symbol:SHMT1 "Serine hydroxymethyltransferase, cytosolic"
species:9606 "Homo sapiens" [GO:0030170 "pyridoxal phosphate
binding" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008732 "L-allo-threonine aldolase activity" evidence=IEA]
[GO:0016597 "amino acid binding" evidence=IEA] [GO:0019264 "glycine
biosynthetic process from serine" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0051289 "protein
homotetramerization" evidence=IEA] InterPro:IPR001085
InterPro:IPR015421 Pfam:PF00464 GO:GO:0030170 Gene3D:3.40.640.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0006544 EMBL:AC127537
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 HGNC:HGNC:10850
ChiTaRS:SHMT1 EMBL:AL353997 Ensembl:ENST00000582653 Uniprot:J3KRZ5
Length = 167
Score = 511 (184.9 bits), Expect = 5.2e-49, P = 5.2e-49
Identities = 97/148 (65%), Positives = 117/148 (79%)
Query: 21 KQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPG 80
K L PL+ D E+ +II+ E RQ GLELI SENF S +V++A+GS + NKYSEGYPG
Sbjct: 20 KMLAQPLKDSDVEVYNIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSEGYPG 79
Query: 81 ARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIM 140
RYYGG E+ID E+LCQKRAL+A++LDP+ WGVNVQ SGSP+NF VYTAL++PH RIM
Sbjct: 80 QRYYGGTEFIDELETLCQKRALQAYKLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIM 139
Query: 141 ALDLPHGGHLSHGYQTDTKKISAVSIFF 168
LDLP GGHL+HG+ TD KKISA SIFF
Sbjct: 140 GLDLPDGGHLTHGFMTDKKKISATSIFF 167
>UNIPROTKB|Q9KMP4 [details] [associations]
symbol:glyA2 "Serine hydroxymethyltransferase 2"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=ISS] [GO:0006545 "glycine biosynthetic process"
evidence=ISS] [GO:0006730 "one-carbon metabolic process"
evidence=ISS] UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288
GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:AE003853
GenomeReviews:AE003853_GR GO:GO:0006730 GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 PIR:A82480 RefSeq:NP_232675.1
ProteinModelPortal:Q9KMP4 SMR:Q9KMP4 DNASU:2612058 GeneID:2612058
KEGG:vch:VCA0278 PATRIC:20085121 OMA:MILTNHE ProtClustDB:PRK13034
Uniprot:Q9KMP4
Length = 435
Score = 500 (181.1 bits), Expect = 7.7e-48, P = 7.7e-48
Identities = 111/257 (43%), Positives = 156/257 (60%)
Query: 24 NAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARY 83
+ PL + + I+ E RQ + +ELI SEN S +VMQA G+ +TNKY+EGYPG RY
Sbjct: 19 STPLAATNDAVFAAIQAEYTRQNEQIELIASENIVSKAVMQAQGTCLTNKYAEGYPGRRY 78
Query: 84 YGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALD 143
YGG E++D E + +RA F+ NVQ SG+ +N V ALL+P D IM +
Sbjct: 79 YGGCEHVDSVEQIAIERAKMLFQCQY----ANVQPHSGAQANGAVMLALLQPGDTIMGMS 134
Query: 144 LPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGA 203
L GGHL+HG + +S +F + Y ++ T I+YD + A +PK+I+AG
Sbjct: 135 LDAGGHLTHGARP---ALSGK--WFNAVQYGVDRQTLEINYDSVRALALEHKPKMIIAGG 189
Query: 204 SAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGP 263
SA R D+ + R + ++ A+++ DMAHI+GLVA G PSP +A VVTTTTHK+LRGP
Sbjct: 190 SAIPRTIDFAQFRSIVDEVGALLMVDMAHIAGLVATGAHPSPLPHAHVVTTTTHKTLRGP 249
Query: 264 RGAMIFFRKGVKEINKQ 280
RG MI +EI+K+
Sbjct: 250 RGGMILTNS--EEIHKK 264
>TIGR_CMR|VC_A0278 [details] [associations]
symbol:VC_A0278 "serine hydroxymethyltransferase"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:AE003853
GenomeReviews:AE003853_GR GO:GO:0006730 GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 PIR:A82480 RefSeq:NP_232675.1
ProteinModelPortal:Q9KMP4 SMR:Q9KMP4 DNASU:2612058 GeneID:2612058
KEGG:vch:VCA0278 PATRIC:20085121 OMA:MILTNHE ProtClustDB:PRK13034
Uniprot:Q9KMP4
Length = 435
Score = 500 (181.1 bits), Expect = 7.7e-48, P = 7.7e-48
Identities = 111/257 (43%), Positives = 156/257 (60%)
Query: 24 NAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARY 83
+ PL + + I+ E RQ + +ELI SEN S +VMQA G+ +TNKY+EGYPG RY
Sbjct: 19 STPLAATNDAVFAAIQAEYTRQNEQIELIASENIVSKAVMQAQGTCLTNKYAEGYPGRRY 78
Query: 84 YGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALD 143
YGG E++D E + +RA F+ NVQ SG+ +N V ALL+P D IM +
Sbjct: 79 YGGCEHVDSVEQIAIERAKMLFQCQY----ANVQPHSGAQANGAVMLALLQPGDTIMGMS 134
Query: 144 LPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGA 203
L GGHL+HG + +S +F + Y ++ T I+YD + A +PK+I+AG
Sbjct: 135 LDAGGHLTHGARP---ALSGK--WFNAVQYGVDRQTLEINYDSVRALALEHKPKMIIAGG 189
Query: 204 SAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGP 263
SA R D+ + R + ++ A+++ DMAHI+GLVA G PSP +A VVTTTTHK+LRGP
Sbjct: 190 SAIPRTIDFAQFRSIVDEVGALLMVDMAHIAGLVATGAHPSPLPHAHVVTTTTHKTLRGP 249
Query: 264 RGAMIFFRKGVKEINKQ 280
RG MI +EI+K+
Sbjct: 250 RGGMILTNS--EEIHKK 264
>UNIPROTKB|I3LGT5 [details] [associations]
symbol:I3LGT5 "Serine hydroxymethyltransferase"
species:9823 "Sus scrofa" [GO:0035999 "tetrahydrofolate
interconversion" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0030170
"pyridoxal phosphate binding" evidence=IEA] [GO:0006563 "L-serine
metabolic process" evidence=IEA] [GO:0006544 "glycine metabolic
process" evidence=IEA] UniPathway:UPA00193 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR019798 Pfam:PF00464 PROSITE:PS00096
GO:GO:0030170 Gene3D:3.40.640.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0006544 GO:GO:0035999 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 GeneTree:ENSGT00390000002762 EMBL:FP565227
Ensembl:ENSSSCT00000028049 Uniprot:I3LGT5
Length = 161
Score = 486 (176.1 bits), Expect = 2.3e-46, P = 2.3e-46
Identities = 93/125 (74%), Positives = 107/125 (85%)
Query: 140 MALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLI 199
M LDLP GGHL+HGY TD K+ISA SIFFE+MPY+LN TG IDYDQL +A LFRP+LI
Sbjct: 1 MGLDLPDGGHLTHGYMTDVKRISATSIFFESMPYKLNPKTGLIDYDQLALTARLFRPRLI 60
Query: 200 VAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKS 259
+AG SAYARL DY R+R+VC++ KA +LADMAHISGLVAA VIPSPFE+ADVVTTTTHK+
Sbjct: 61 IAGTSAYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFEHADVVTTTTHKT 120
Query: 260 LRGPR 264
LRG R
Sbjct: 121 LRGAR 125
>UNIPROTKB|G3V2W0 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase,
mitochondrial" species:9606 "Homo sapiens" [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0005758
"mitochondrial intermembrane space" evidence=IEA] [GO:0005759
"mitochondrial matrix" evidence=IEA] [GO:0006564 "L-serine
biosynthetic process" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0008732
"L-allo-threonine aldolase activity" evidence=IEA] [GO:0016597
"amino acid binding" evidence=IEA] [GO:0019264 "glycine
biosynthetic process from serine" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0051289 "protein
homotetramerization" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=IDA]
InterPro:IPR001085 InterPro:IPR015421 Pfam:PF00464 GO:GO:0005739
GO:GO:0030170 Gene3D:3.40.640.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0015630 GO:GO:0005743 GO:GO:0005758 GO:GO:0005759
GO:GO:0008284 GO:GO:0016597 GO:GO:0051289 GO:GO:0006564
GO:GO:0008732 GO:GO:0004372 PANTHER:PTHR11680 GO:GO:0019264
EMBL:AC137834 HGNC:HGNC:10852 ChiTaRS:SHMT2
ProteinModelPortal:G3V2W0 SMR:G3V2W0 Ensembl:ENST00000554310
ArrayExpress:G3V2W0 Bgee:G3V2W0 Uniprot:G3V2W0
Length = 160
Score = 466 (169.1 bits), Expect = 3.1e-44, P = 3.1e-44
Identities = 85/129 (65%), Positives = 103/129 (79%)
Query: 31 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYI 90
DPE+ ++++ EK RQ +GLELI SENF S + ++A+GS + NKYSEGYPG RYYGG E +
Sbjct: 32 DPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVV 91
Query: 91 DMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHL 150
D E LCQ+RALEAF LDP +WGVNVQ SGSP+N VYTALL+PHDRIM LDLP GGHL
Sbjct: 92 DEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHL 151
Query: 151 SHGYQTDTK 159
+HGY +D K
Sbjct: 152 THGYMSDVK 160
>UNIPROTKB|G3V4X0 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase,
mitochondrial" species:9606 "Homo sapiens" [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0005758
"mitochondrial intermembrane space" evidence=IEA] [GO:0005759
"mitochondrial matrix" evidence=IEA] [GO:0006564 "L-serine
biosynthetic process" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0008732
"L-allo-threonine aldolase activity" evidence=IEA] [GO:0016597
"amino acid binding" evidence=IEA] [GO:0019264 "glycine
biosynthetic process from serine" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0051289 "protein
homotetramerization" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=IDA]
InterPro:IPR001085 InterPro:IPR015421 Pfam:PF00464 GO:GO:0005739
GO:GO:0030170 Gene3D:3.40.640.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0015630 GO:GO:0005743 GO:GO:0005758 GO:GO:0005759
GO:GO:0008284 GO:GO:0016597 GO:GO:0051289 GO:GO:0006564
GO:GO:0008732 GO:GO:0004372 PANTHER:PTHR11680 GO:GO:0019264
EMBL:AC137834 HGNC:HGNC:10852 ChiTaRS:SHMT2
ProteinModelPortal:G3V4X0 SMR:G3V4X0 Ensembl:ENST00000557427
ArrayExpress:G3V4X0 Bgee:G3V4X0 Uniprot:G3V4X0
Length = 159
Score = 461 (167.3 bits), Expect = 1.0e-43, P = 1.0e-43
Identities = 84/127 (66%), Positives = 102/127 (80%)
Query: 31 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYI 90
DPE+ ++++ EK RQ +GLELI SENF S + ++A+GS + NKYSEGYPG RYYGG E +
Sbjct: 32 DPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVV 91
Query: 91 DMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHL 150
D E LCQ+RALEAF LDP +WGVNVQ SGSP+N VYTALL+PHDRIM LDLP GGHL
Sbjct: 92 DEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHL 151
Query: 151 SHGYQTD 157
+HGY +D
Sbjct: 152 THGYMSD 158
>UNIPROTKB|G3V2E4 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase,
mitochondrial" species:9606 "Homo sapiens" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0006544
"glycine metabolic process" evidence=IEA] [GO:0006563 "L-serine
metabolic process" evidence=IEA] [GO:0030170 "pyridoxal phosphate
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA]
InterPro:IPR001085 InterPro:IPR015421 Pfam:PF00464 GO:GO:0005739
GO:GO:0030170 Gene3D:3.40.640.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0015630 GO:GO:0006544 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 EMBL:AC137834 HGNC:HGNC:10852 ChiTaRS:SHMT2
ProteinModelPortal:G3V2E4 SMR:G3V2E4 Ensembl:ENST00000557433
ArrayExpress:G3V2E4 Bgee:G3V2E4 Uniprot:G3V2E4
Length = 171
Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
Identities = 78/118 (66%), Positives = 94/118 (79%)
Query: 31 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYI 90
DPE+ ++++ EK RQ +GLELI SENF S + ++A+GS + NKYSEGYPG RYYGG E +
Sbjct: 53 DPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVV 112
Query: 91 DMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGG 148
D E LCQ+RALEAF LDP +WGVNVQ SGSP+N VYTALL+PHDRIM LDLP GG
Sbjct: 113 DEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGG 170
>UNIPROTKB|G3V4T0 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase,
mitochondrial" species:9606 "Homo sapiens" [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0005758
"mitochondrial intermembrane space" evidence=IEA] [GO:0005759
"mitochondrial matrix" evidence=IEA] [GO:0006564 "L-serine
biosynthetic process" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0008732
"L-allo-threonine aldolase activity" evidence=IEA] [GO:0016597
"amino acid binding" evidence=IEA] [GO:0019264 "glycine
biosynthetic process from serine" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0051289 "protein
homotetramerization" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=IDA]
InterPro:IPR001085 InterPro:IPR015421 Pfam:PF00464 GO:GO:0005739
GO:GO:0030170 Gene3D:3.40.640.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0015630 GO:GO:0005743 GO:GO:0005758 GO:GO:0005759
GO:GO:0008284 GO:GO:0016597 GO:GO:0051289 GO:GO:0006564
GO:GO:0008732 GO:GO:0004372 PANTHER:PTHR11680 GO:GO:0019264
EMBL:AC137834 HGNC:HGNC:10852 ChiTaRS:SHMT2
ProteinModelPortal:G3V4T0 SMR:G3V4T0 Ensembl:ENST00000555773
ArrayExpress:G3V4T0 Bgee:G3V4T0 Uniprot:G3V4T0
Length = 149
Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
Identities = 78/118 (66%), Positives = 94/118 (79%)
Query: 31 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYI 90
DPE+ ++++ EK RQ +GLELI SENF S + ++A+GS + NKYSEGYPG RYYGG E +
Sbjct: 32 DPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVV 91
Query: 91 DMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGG 148
D E LCQ+RALEAF LDP +WGVNVQ SGSP+N VYTALL+PHDRIM LDLP GG
Sbjct: 92 DEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGG 149
>UNIPROTKB|G3V3Y8 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase,
mitochondrial" species:9606 "Homo sapiens" [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0005758
"mitochondrial intermembrane space" evidence=IEA] [GO:0005759
"mitochondrial matrix" evidence=IEA] [GO:0006564 "L-serine
biosynthetic process" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0008732
"L-allo-threonine aldolase activity" evidence=IEA] [GO:0016597
"amino acid binding" evidence=IEA] [GO:0019264 "glycine
biosynthetic process from serine" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0051289 "protein
homotetramerization" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=IDA]
InterPro:IPR001085 InterPro:IPR015421 Pfam:PF00464 GO:GO:0005739
GO:GO:0030170 Gene3D:3.40.640.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0015630 GO:GO:0005743 GO:GO:0005758 GO:GO:0005759
GO:GO:0008284 GO:GO:0016597 GO:GO:0051289 GO:GO:0006564
GO:GO:0008732 GO:GO:0004372 PANTHER:PTHR11680 GO:GO:0019264
EMBL:AC137834 HGNC:HGNC:10852 ChiTaRS:SHMT2 SMR:G3V3Y8
Ensembl:ENST00000553529 Ensembl:ENST00000556737 Uniprot:G3V3Y8
Length = 147
Score = 409 (149.0 bits), Expect = 3.4e-38, P = 3.4e-38
Identities = 76/115 (66%), Positives = 92/115 (80%)
Query: 31 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYI 90
DPE+ ++++ EK RQ +GLELI SENF S + ++A+GS + NKYSEGYPG RYYGG E +
Sbjct: 32 DPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVV 91
Query: 91 DMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLP 145
D E LCQ+RALEAF LDP +WGVNVQ SGSP+N VYTALL+PHDRIM LDLP
Sbjct: 92 DEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLP 146
>UNIPROTKB|G3V241 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase,
mitochondrial" species:9606 "Homo sapiens" [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0005758
"mitochondrial intermembrane space" evidence=IEA] [GO:0005759
"mitochondrial matrix" evidence=IEA] [GO:0006564 "L-serine
biosynthetic process" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0008732
"L-allo-threonine aldolase activity" evidence=IEA] [GO:0016597
"amino acid binding" evidence=IEA] [GO:0019264 "glycine
biosynthetic process from serine" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0051289 "protein
homotetramerization" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=IDA]
InterPro:IPR001085 InterPro:IPR015421 Pfam:PF00464 GO:GO:0005739
GO:GO:0030170 Gene3D:3.40.640.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0015630 GO:GO:0005743 GO:GO:0005758 GO:GO:0005759
GO:GO:0008284 GO:GO:0016597 GO:GO:0051289 GO:GO:0006564
GO:GO:0008732 GO:GO:0004372 PANTHER:PTHR11680 GO:GO:0019264
EMBL:AC137834 HGNC:HGNC:10852 ChiTaRS:SHMT2
ProteinModelPortal:G3V241 SMR:G3V241 Ensembl:ENST00000557703
ArrayExpress:G3V241 Bgee:G3V241 Uniprot:G3V241
Length = 142
Score = 388 (141.6 bits), Expect = 5.7e-36, P = 5.7e-36
Identities = 72/110 (65%), Positives = 88/110 (80%)
Query: 31 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYI 90
DPE+ ++++ EK RQ +GLELI SENF S + ++A+GS + NKYSEGYPG RYYGG E +
Sbjct: 32 DPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVV 91
Query: 91 DMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIM 140
D E LCQ+RALEAF LDP +WGVNVQ SGSP+N VYTALL+PHDRIM
Sbjct: 92 DEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIM 141
>UNIPROTKB|B4DLV4 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase" species:9606
"Homo sapiens" [GO:0006544 "glycine metabolic process"
evidence=IEA] [GO:0006563 "L-serine metabolic process"
evidence=IEA] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0004372 "glycine hydroxymethyltransferase
activity" evidence=IEA] [GO:0035999 "tetrahydrofolate
interconversion" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=IDA]
UniPathway:UPA00193 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0005739 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 GO:GO:0015630 EMBL:CH471054 GO:GO:0008168
GO:GO:0006544 GO:GO:0035999 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 HOGENOM:HOG000239405 HOVERGEN:HBG002807
EMBL:AC137834 UniGene:Hs.741179 HGNC:HGNC:10852 ChiTaRS:SHMT2
EMBL:AK297173 IPI:IPI00794549 SMR:B4DLV4 STRING:B4DLV4
Ensembl:ENST00000393827 UCSC:uc001snj.2 Uniprot:B4DLV4
Length = 408
Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
Identities = 77/136 (56%), Positives = 100/136 (73%)
Query: 151 SHGYQT--DTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYAR 208
S GYQ + + +S + + TG IDY+QL +A LFRP+LI+AG SAYAR
Sbjct: 75 SSGYQPRPSSSSLCPISSTALAVCVSVQPKTGLIDYNQLALTARLFRPRLIIAGTSAYAR 134
Query: 209 LYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMI 268
L DY R+R+VC++ KA +LADMAHISGLVAA VIPSPF++AD+VTTTTHK+LRG R +I
Sbjct: 135 LIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHADIVTTTTHKTLRGARSGLI 194
Query: 269 FFRKGVKEIN-KQGKE 283
F+RKGVK ++ K G+E
Sbjct: 195 FYRKGVKAVDPKTGRE 210
>UNIPROTKB|H0YIZ0 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase" species:9606
"Homo sapiens" [GO:0006544 "glycine metabolic process"
evidence=IEA] [GO:0006563 "L-serine metabolic process"
evidence=IEA] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0004372 "glycine hydroxymethyltransferase
activity" evidence=IEA] [GO:0035999 "tetrahydrofolate
interconversion" evidence=IEA] UniPathway:UPA00193
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PROSITE:PS00096 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 GO:GO:0006544 GO:GO:0035999 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 EMBL:AC137834 HGNC:HGNC:10852
ChiTaRS:SHMT2 Ensembl:ENST00000557529 Uniprot:H0YIZ0
Length = 264
Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
Identities = 71/105 (67%), Positives = 89/105 (84%)
Query: 180 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAA 239
G IDY+QL +A LFRP+LI+AG SAYARL DY R+R+VC++ KA +LADMAHISGLVAA
Sbjct: 2 GLIDYNQLALTARLFRPRLIIAGTSAYARLIDYARMREVCDEVKAHLLADMAHISGLVAA 61
Query: 240 GVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEIN-KQGKE 283
VIPSPF++AD+VTTTTHK+LRG R +IF+RKGVK ++ K G+E
Sbjct: 62 KVIPSPFKHADIVTTTTHKTLRGARSGLIFYRKGVKAVDPKTGRE 106
>UNIPROTKB|Q4KLG7 [details] [associations]
symbol:Shmt1 "Serine hydroxymethyltransferase"
species:10116 "Rattus norvegicus" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0006544
"glycine metabolic process" evidence=IEA] [GO:0006563 "L-serine
metabolic process" evidence=IEA] [GO:0030170 "pyridoxal phosphate
binding" evidence=IEA] [GO:0035999 "tetrahydrofolate
interconversion" evidence=IEA] UniPathway:UPA00193
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
RGD:1312011 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0006544 GO:GO:0035999
eggNOG:COG0112 GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680
HOGENOM:HOG000239405 HOVERGEN:HBG002807 EMBL:BC099219
IPI:IPI00627076 UniGene:Rn.3684 STRING:Q4KLG7
Ensembl:ENSRNOT00000057973 OMA:MTPEFKL Genevestigator:Q4KLG7
Uniprot:Q4KLG7
Length = 352
Score = 360 (131.8 bits), Expect = 5.2e-33, P = 5.2e-33
Identities = 68/106 (64%), Positives = 87/106 (82%)
Query: 179 TGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVA 238
TGYI+YDQLE++A+LF PKLI+AG S Y+R DY R+RK+ + A ++ADMAHISGLVA
Sbjct: 46 TGYINYDQLEENASLFHPKLIIAGTSCYSRNLDYARLRKIADDNGAYLMADMAHISGLVA 105
Query: 239 AGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEIN-KQGKE 283
AGV+PSPFE+ VVTTTTHK+LRG R MIF+RKGV+ ++ K G+E
Sbjct: 106 AGVVPSPFEHCHVVTTTTHKTLRGCRAGMIFYRKGVRSVDPKTGEE 151
>TIGR_CMR|SPO_3529 [details] [associations]
symbol:SPO_3529 "serine hydroxymethyltransferase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 Pfam:PF00464
PIRSF:PIRSF000412 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0008168 GO:GO:0006544
KO:K00600 GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680
HOGENOM:HOG000239403 RefSeq:YP_168724.1 ProteinModelPortal:Q5LMN4
GeneID:3192992 KEGG:sil:SPO3529 PATRIC:23380529 OMA:ATMANLA
ProtClustDB:CLSK759294 Uniprot:Q5LMN4
Length = 431
Score = 211 (79.3 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 66/248 (26%), Positives = 119/248 (47%)
Query: 25 APLEVVDPEIADIIEHEKA-RQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARY 83
A + +D + +IE + + L P+ N + + + ++ S GYPG +Y
Sbjct: 19 ADSDAIDAHLEALIEENRTIHDAECFNLNPATNVMNPRAEAVLARGLGSRPSLGYPGDKY 78
Query: 84 YGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALD 143
G E I+ E + + A + F ++ ++ SG+ +N + AL +P D I+A
Sbjct: 79 EMGLEAIEEIEVIAAELAAKVFNA---RYA-EIRVGSGALANLYGFMALTRPGDTIIAPP 134
Query: 144 LPHGGHLSHGYQTDTKKISAVSIF-FETMPYRLNESTGY-IDYDQLEKSATLFRPKLIVA 201
GGH++H K ++ +T+ + ++ GY +D L + A RP+LI
Sbjct: 135 ASIGGHVTH------HKAGCAGLYGLKTIEAPV-DADGYSLDLSALAELAERHRPRLITV 187
Query: 202 GASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPF-EYADVVTTTTHKSL 260
G S + +R++ ++ A +L D AH G++A G +P E A ++T +T+KSL
Sbjct: 188 GGSLNLFPHPVAAVREIADRVGAKVLFDAAHQCGIIAGGAWANPLDEGAHLMTMSTYKSL 247
Query: 261 RGPRGAMI 268
GP G +I
Sbjct: 248 GGPAGGLI 255
>UNIPROTKB|J3KRK5 [details] [associations]
symbol:SHMT1 "Serine hydroxymethyltransferase, cytosolic"
species:9606 "Homo sapiens" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0006544
"glycine metabolic process" evidence=IEA] [GO:0006563 "L-serine
metabolic process" evidence=IEA] [GO:0008242 "omega peptidase
activity" evidence=IEA] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] InterPro:IPR001085 InterPro:IPR006155
InterPro:IPR015421 Pfam:PF00464 PROSITE:PS50957 GO:GO:0030170
Gene3D:3.40.640.10 InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0008242
GO:GO:0006544 EMBL:AC127537 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 HGNC:HGNC:10850 ChiTaRS:SHMT1 EMBL:AL353997
ProteinModelPortal:J3KRK5 Ensembl:ENST00000580002 Uniprot:J3KRK5
Length = 128
Score = 166 (63.5 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 35/62 (56%), Positives = 44/62 (70%)
Query: 21 KQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPG 80
K L PL+ D E+ +II+ E RQ GLELI SENF S +V++A+GS + NKYSEGYPG
Sbjct: 20 KMLAQPLKDSDVEVYNIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSEGYPG 79
Query: 81 AR 82
R
Sbjct: 80 QR 81
>UNIPROTKB|G3V2D2 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase,
mitochondrial" species:9606 "Homo sapiens" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0006544
"glycine metabolic process" evidence=IEA] [GO:0006563 "L-serine
metabolic process" evidence=IEA] [GO:0030170 "pyridoxal phosphate
binding" evidence=IEA] InterPro:IPR001085 InterPro:IPR015421
Pfam:PF00464 GO:GO:0030170 Gene3D:3.40.640.10 InterPro:IPR015424
SUPFAM:SSF53383 GO:GO:0006544 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 EMBL:AC137834 HGNC:HGNC:10852 ChiTaRS:SHMT2
ProteinModelPortal:G3V2D2 SMR:G3V2D2 Ensembl:ENST00000557269
ArrayExpress:G3V2D2 Bgee:G3V2D2 Uniprot:G3V2D2
Length = 52
Score = 154 (59.3 bits), Expect = 9.1e-11, P = 9.1e-11
Identities = 27/37 (72%), Positives = 32/37 (86%)
Query: 140 MALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 176
M LDLP GGHL+HGY +D K+ISA SIFFE+MPY+LN
Sbjct: 1 MGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLN 37
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.133 0.394 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 295 295 0.00092 115 3 11 22 0.40 34
33 0.44 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 84
No. of states in DFA: 610 (65 KB)
Total size of DFA: 213 KB (2118 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 23.01u 0.09s 23.10t Elapsed: 00:00:01
Total cpu time: 23.02u 0.10s 23.12t Elapsed: 00:00:01
Start: Fri May 10 05:55:18 2013 End: Fri May 10 05:55:19 2013