BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022564
(295 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P50433|GLYM_SOLTU Serine hydroxymethyltransferase, mitochondrial OS=Solanum tuberosum
PE=2 SV=1
Length = 518
Score = 575 bits (1481), Expect = e-163, Method: Compositional matrix adjust.
Identities = 269/283 (95%), Positives = 280/283 (98%)
Query: 1 MSSLPNEAVYEKEKNGVTWPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSV 60
MSSLPNEAVY+KEK+GV WPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSV
Sbjct: 30 MSSLPNEAVYDKEKSGVAWPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSV 89
Query: 61 SVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLS 120
SVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAE+LCQKRALEAFRLDP KWGVNVQ LS
Sbjct: 90 SVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFRLDPAKWGVNVQPLS 149
Query: 121 GSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTG 180
GSP+NFQVYTALLKPH+RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL+ESTG
Sbjct: 150 GSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTG 209
Query: 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAG 240
YIDYDQLEKSATLFRPKLIVAGASAYARLYDY+RIRKVCNKQKAI+LADMAHISGLVAAG
Sbjct: 210 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYDRIRKVCNKQKAILLADMAHISGLVAAG 269
Query: 241 VIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKE 283
VIPSPF+YADVVTTTTHKSLRGPRGAMIF+RKGVKE+NKQGKE
Sbjct: 270 VIPSPFDYADVVTTTTHKSLRGPRGAMIFYRKGVKEVNKQGKE 312
>sp|P49357|GLYM_FLAPR Serine hydroxymethyltransferase 1, mitochondrial OS=Flaveria
pringlei PE=2 SV=1
Length = 517
Score = 567 bits (1460), Expect = e-161, Method: Compositional matrix adjust.
Identities = 267/283 (94%), Positives = 276/283 (97%)
Query: 1 MSSLPNEAVYEKEKNGVTWPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSV 60
MSSLP+EAVYEKE+ GVTWPKQLNAPLEVVDPEIADIIE EKARQWKGLELIPSENFTS+
Sbjct: 30 MSSLPSEAVYEKERPGVTWPKQLNAPLEVVDPEIADIIELEKARQWKGLELIPSENFTSL 89
Query: 61 SVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLS 120
SVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAE+LCQKRALEAFRLDP KWGVNVQ LS
Sbjct: 90 SVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFRLDPAKWGVNVQPLS 149
Query: 121 GSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTG 180
GSP+NF VYTALLK HDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTG
Sbjct: 150 GSPANFHVYTALLKAHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTG 209
Query: 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAG 240
YIDYDQLEKSATLFRPKLIVAGASAYARLYDY RIRKVC+KQKAIMLADMAHISGLVAAG
Sbjct: 210 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYARIRKVCDKQKAIMLADMAHISGLVAAG 269
Query: 241 VIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKE 283
VIPSPF+YADVVTTTTHKSLRGPRGAMIFFRKG+KE+NKQGKE
Sbjct: 270 VIPSPFDYADVVTTTTHKSLRGPRGAMIFFRKGLKEVNKQGKE 312
>sp|Q9SZJ5|GLYM_ARATH Serine hydroxymethyltransferase, mitochondrial OS=Arabidopsis
thaliana GN=SHM1 PE=1 SV=1
Length = 517
Score = 565 bits (1455), Expect = e-160, Method: Compositional matrix adjust.
Identities = 266/283 (93%), Positives = 276/283 (97%)
Query: 1 MSSLPNEAVYEKEKNGVTWPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSV 60
MSSLP+EAV EKE++ VTWPKQLNAPLE VDPEIADIIEHEKARQWKGLELIPSENFTSV
Sbjct: 29 MSSLPSEAVDEKERSRVTWPKQLNAPLEEVDPEIADIIEHEKARQWKGLELIPSENFTSV 88
Query: 61 SVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLS 120
SVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAE+LCQKRALEAFRLDPEKWGVNVQ LS
Sbjct: 89 SVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFRLDPEKWGVNVQPLS 148
Query: 121 GSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTG 180
GSP+NF VYTALLKPH+RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL+ESTG
Sbjct: 149 GSPANFHVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTG 208
Query: 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAG 240
YIDYDQ+EKSATLFRPKLIVAGASAYARLYDY RIRKVCNKQKA+MLADMAHISGLVAA
Sbjct: 209 YIDYDQMEKSATLFRPKLIVAGASAYARLYDYARIRKVCNKQKAVMLADMAHISGLVAAN 268
Query: 241 VIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKE 283
VIPSPF+YADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKE
Sbjct: 269 VIPSPFDYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKE 311
>sp|P34899|GLYM_PEA Serine hydroxymethyltransferase, mitochondrial OS=Pisum sativum
PE=1 SV=1
Length = 518
Score = 560 bits (1443), Expect = e-159, Method: Compositional matrix adjust.
Identities = 262/282 (92%), Positives = 275/282 (97%)
Query: 2 SSLPNEAVYEKEKNGVTWPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVS 61
SSLP+EAVY+KE VTWPKQLN+PLEV+DPEIADIIE EKARQWKGLELIPSENFTS+S
Sbjct: 31 SSLPDEAVYDKENPRVTWPKQLNSPLEVIDPEIADIIELEKARQWKGLELIPSENFTSLS 90
Query: 62 VMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSG 121
VMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAE+LCQKRALEAFRLDP KWGVNVQ LSG
Sbjct: 91 VMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFRLDPAKWGVNVQPLSG 150
Query: 122 SPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGY 181
SPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL+ESTGY
Sbjct: 151 SPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGY 210
Query: 182 IDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGV 241
IDYDQLEKSATLFRPKLIVAGASAYARLYDY RIRKVC+KQKA++LADMAHISGLVAAGV
Sbjct: 211 IDYDQLEKSATLFRPKLIVAGASAYARLYDYARIRKVCDKQKAVLLADMAHISGLVAAGV 270
Query: 242 IPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKE 283
IPSPF+YADVVTTTTHKSLRGPRGAMIFFRKG+KE+NKQGKE
Sbjct: 271 IPSPFDYADVVTTTTHKSLRGPRGAMIFFRKGLKEVNKQGKE 312
>sp|P49358|GLYN_FLAPR Serine hydroxymethyltransferase 2, mitochondrial OS=Flaveria
pringlei PE=2 SV=1
Length = 517
Score = 555 bits (1430), Expect = e-157, Method: Compositional matrix adjust.
Identities = 264/283 (93%), Positives = 273/283 (96%)
Query: 1 MSSLPNEAVYEKEKNGVTWPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSV 60
MSSLP+EAVYEKE+ GVTWPKQLNAPLEV DPEIADIIE EKARQWKGLELI SENFTS+
Sbjct: 30 MSSLPSEAVYEKERPGVTWPKQLNAPLEVGDPEIADIIELEKARQWKGLELILSENFTSL 89
Query: 61 SVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLS 120
SVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAE+LCQKRALEAFRLD KWGVNVQ LS
Sbjct: 90 SVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFRLDAAKWGVNVQPLS 149
Query: 121 GSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTG 180
GSP+NF VYTALLK HDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTG
Sbjct: 150 GSPANFHVYTALLKAHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTG 209
Query: 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAG 240
YIDYDQLEKSATLFRPKLIVAGASAYARLYDY RIRKVC+KQKAI+LADMAHISGLVAAG
Sbjct: 210 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYARIRKVCDKQKAILLADMAHISGLVAAG 269
Query: 241 VIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKE 283
VIPSPF+YADVVTTTTHKSLRGPRGAMIFFRKGVKE+NKQGKE
Sbjct: 270 VIPSPFDYADVVTTTTHKSLRGPRGAMIFFRKGVKEVNKQGKE 312
>sp|Q10104|GLYM_SCHPO Serine hydroxymethyltransferase, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=shm2 PE=3 SV=2
Length = 488
Score = 390 bits (1001), Expect = e-108, Method: Compositional matrix adjust.
Identities = 183/261 (70%), Positives = 211/261 (80%)
Query: 21 KQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPG 80
K L APL DP + I+E EK+RQ + + LI SENFTS +VM A+GS+M NKYSEGYPG
Sbjct: 28 KLLKAPLAECDPTVYKILESEKSRQKESIALIASENFTSRAVMDALGSIMQNKYSEGYPG 87
Query: 81 ARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIM 140
ARYYGGNE+ID AE LCQ RALEAF LD EKWGVNVQ SGSP+N Q Y A++KPHDR+M
Sbjct: 88 ARYYGGNEFIDQAERLCQTRALEAFHLDGEKWGVNVQPHSGSPANLQAYQAVMKPHDRLM 147
Query: 141 ALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIV 200
LDLPHGGHLSHG+ T K ISAVS +F TMPY +N+ TG IDYD LEK+A FRPK+IV
Sbjct: 148 GLDLPHGGHLSHGFSTPQKAISAVSTYFSTMPYNVNKETGIIDYDSLEKAAIQFRPKVIV 207
Query: 201 AGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSL 260
AGASAYARL DY+R+RK+ A +L DMAHISGLVAAGVIPSPFEYAD+VTTTTHKSL
Sbjct: 208 AGASAYARLVDYKRMRKITEMCNAYLLCDMAHISGLVAAGVIPSPFEYADIVTTTTHKSL 267
Query: 261 RGPRGAMIFFRKGVKEINKQG 281
RGPRGAMIF+RKG + +K+G
Sbjct: 268 RGPRGAMIFYRKGTRSHDKRG 288
>sp|O13972|GLYD_SCHPO Probable serine hydroxymethyltransferase, cytosolic
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC24C9.12c PE=3 SV=1
Length = 467
Score = 387 bits (993), Expect = e-107, Method: Compositional matrix adjust.
Identities = 177/256 (69%), Positives = 213/256 (83%)
Query: 26 PLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYG 85
PL+ DP +A+I+ HE RQ + LI SENFTS +VM A+GSVM+NKYSEGYPGARYYG
Sbjct: 11 PLKEQDPTVAEIMRHEADRQRSSVVLIASENFTSRAVMDALGSVMSNKYSEGYPGARYYG 70
Query: 86 GNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLP 145
GN++ID E+LCQ+RAL AF LDP KWGVNVQ LSGSP+N QVY A++ PH R+M LDLP
Sbjct: 71 GNKFIDQIETLCQERALAAFNLDPAKWGVNVQCLSGSPANMQVYQAIMPPHGRLMGLDLP 130
Query: 146 HGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASA 205
GGHLSHGYQTDTKKISAVS +FE+MPYR++ +TG IDYD LE A LFRPK++VAG SA
Sbjct: 131 SGGHLSHGYQTDTKKISAVSTYFESMPYRVDPNTGLIDYDMLEHDAQLFRPKILVAGTSA 190
Query: 206 YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG 265
Y RL DY R+R++ + A ++ DMAHISGLV+AGVIPSPFEYADVVTTTTHKSLRGPRG
Sbjct: 191 YCRLIDYARMRQIADSVNAYLVVDMAHISGLVSAGVIPSPFEYADVVTTTTHKSLRGPRG 250
Query: 266 AMIFFRKGVKEINKQG 281
AMIFFR+G+++ +K+G
Sbjct: 251 AMIFFRRGLRKHDKKG 266
>sp|O13426|GLYC_CANAL Serine hydroxymethyltransferase, cytosolic OS=Candida albicans
(strain SC5314 / ATCC MYA-2876) GN=SHM2 PE=1 SV=4
Length = 470
Score = 384 bits (986), Expect = e-106, Method: Compositional matrix adjust.
Identities = 176/259 (67%), Positives = 216/259 (83%), Gaps = 1/259 (0%)
Query: 27 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGG 86
L+ DPE+ II+ E RQ + LI SENFT+ +V A+G+ M NKYSEGYPGARYYGG
Sbjct: 18 LKDTDPEVDQIIKDEIDRQQHSIVLIASENFTTTAVFDALGTPMCNKYSEGYPGARYYGG 77
Query: 87 NEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPH 146
NE+ID E LCQ+RAL+AF L P+KWGVNVQ+LSGSP+N QVY A++KPH+R+M LDLPH
Sbjct: 78 NEHIDRMELLCQERALKAFGLTPDKWGVNVQTLSGSPANLQVYQAIMKPHERLMGLDLPH 137
Query: 147 GGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY 206
GGHLSHGYQTD++KISAVS +FETMPYR++ TG IDYD LEK+A L+RPK++VAG SAY
Sbjct: 138 GGHLSHGYQTDSRKISAVSTYFETMPYRVDLETGLIDYDMLEKTAVLYRPKVLVAGTSAY 197
Query: 207 ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGA 266
RL DY+R+R++ +K A ++ DMAHISGL+AAGVIPSPFEYAD+VTTTTHKSLRGPRGA
Sbjct: 198 CRLIDYKRMREIADKVGAYLVVDMAHISGLIAAGVIPSPFEYADIVTTTTHKSLRGPRGA 257
Query: 267 MIFFRKGVKEIN-KQGKEF 284
MIFFR+GV+ +N K G+E
Sbjct: 258 MIFFRRGVRSVNPKTGQEI 276
>sp|Q60V73|GLYC_CAEBR Serine hydroxymethyltransferase OS=Caenorhabditis briggsae
GN=mel-32 PE=3 SV=3
Length = 511
Score = 382 bits (982), Expect = e-105, Method: Compositional matrix adjust.
Identities = 174/257 (67%), Positives = 215/257 (83%)
Query: 27 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGG 86
+E +DPE+ +I+++EK+RQ +GLELI SENFTS +VM A+GS M NKYSEGYPGARYYGG
Sbjct: 56 VEKIDPEVFNIMKNEKSRQRRGLELIASENFTSKAVMDALGSAMCNKYSEGYPGARYYGG 115
Query: 87 NEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPH 146
NE+ID E LCQKRALE F LDP KWGVNVQSLSGSP+NF VYTAL+ + RIM LDLP
Sbjct: 116 NEFIDQMEILCQKRALEVFGLDPAKWGVNVQSLSGSPANFAVYTALVGANGRIMGLDLPD 175
Query: 147 GGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY 206
GGHL+HG+ T +K+SA S FF++MPY+++ +G IDYD+LE++A LFRPK+++AG S Y
Sbjct: 176 GGHLTHGFFTPARKVSATSEFFQSMPYKVDAQSGLIDYDKLEENAMLFRPKVLIAGVSCY 235
Query: 207 ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGA 266
AR DYER RK+ K A +++DMAHISGLVAAG+IPSPFEY+DVVTTTTHKSLRGPRGA
Sbjct: 236 ARHLDYERFRKIATKAGAYLMSDMAHISGLVAAGLIPSPFEYSDVVTTTTHKSLRGPRGA 295
Query: 267 MIFFRKGVKEINKQGKE 283
MIF+RKGV+ +N +G E
Sbjct: 296 MIFYRKGVRSVNAKGVE 312
>sp|O13425|GLYM_CANAX Serine hydroxymethyltransferase, mitochondrial OS=Candida albicans
GN=SHM1 PE=3 SV=1
Length = 493
Score = 379 bits (973), Expect = e-104, Method: Compositional matrix adjust.
Identities = 175/255 (68%), Positives = 210/255 (82%)
Query: 30 VDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEY 89
VDPE+ADI+ E+ RQ + LIPSENFTS +VM +GS M NKYSEGYPG RYYGGNE
Sbjct: 42 VDPEMADILNQERTRQKNSITLIPSENFTSKAVMDLLGSEMQNKYSEGYPGERYYGGNEI 101
Query: 90 IDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGH 149
ID AE+LCQKRALEAF LDP +WGVNVQ LSG+P+N Y+A+L+ DRIM LDLPHGGH
Sbjct: 102 IDKAEALCQKRALEAFGLDPSQWGVNVQPLSGAPANLYAYSAILEVGDRIMGLDLPHGGH 161
Query: 150 LSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARL 209
LSHGYQT T KIS +S +F+TMPYRLNE TG IDYD LEK+A LFRPK+IVAGASAY+R+
Sbjct: 162 LSHGYQTKTTKISYISKYFQTMPYRLNEETGIIDYDTLEKNAQLFRPKVIVAGASAYSRV 221
Query: 210 YDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIF 269
DY+R+R++ + A +L+DMAHISGLV+A V SPF Y+D+VTTTTHKSLRGPRGAMIF
Sbjct: 222 IDYKRMRQLSIRLGAYLLSDMAHISGLVSAVVTDSPFPYSDIVTTTTHKSLRGPRGAMIF 281
Query: 270 FRKGVKEINKQGKEF 284
FRKG++++ +GKE
Sbjct: 282 FRKGIRKVTTKGKEI 296
>sp|P50432|GLYC_CAEEL Serine hydroxymethyltransferase OS=Caenorhabditis elegans GN=mel-32
PE=1 SV=2
Length = 507
Score = 377 bits (968), Expect = e-104, Method: Compositional matrix adjust.
Identities = 173/255 (67%), Positives = 211/255 (82%)
Query: 27 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGG 86
+E VDPE+ DI+++EK RQ +GLELI SENFTS +VM A+GS M NKYSEGYPGARYYGG
Sbjct: 52 VEKVDPEVFDIMKNEKKRQRRGLELIASENFTSKAVMDALGSAMCNKYSEGYPGARYYGG 111
Query: 87 NEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPH 146
NE+ID E LCQKRALE F LDP KWGVNVQ LSGSP+NF VYTA++ + RIM LDLP
Sbjct: 112 NEFIDQMELLCQKRALEVFGLDPAKWGVNVQPLSGSPANFAVYTAIVGSNGRIMGLDLPD 171
Query: 147 GGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY 206
GGHL+HG+ T +K+SA S FF+++PY+++ +TG IDYD+LE++A LFRPK I+AG S Y
Sbjct: 172 GGHLTHGFFTPARKVSATSEFFQSLPYKVDPTTGLIDYDKLEQNAMLFRPKAIIAGVSCY 231
Query: 207 ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGA 266
AR DYER RK+ K A +++DMAHISGLVAAG+IPSPFEY+DVVTTTTHKSLRGPRGA
Sbjct: 232 ARHLDYERFRKIATKAGAYLMSDMAHISGLVAAGLIPSPFEYSDVVTTTTHKSLRGPRGA 291
Query: 267 MIFFRKGVKEINKQG 281
+IF+RKGV+ N +G
Sbjct: 292 LIFYRKGVRSTNAKG 306
>sp|Q6FUP6|GLYC_CANGA Serine hydroxymethyltransferase, cytosolic OS=Candida glabrata
(strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 /
NRRL Y-65) GN=SHM2 PE=3 SV=1
Length = 469
Score = 375 bits (963), Expect = e-103, Method: Compositional matrix adjust.
Identities = 173/265 (65%), Positives = 214/265 (80%), Gaps = 1/265 (0%)
Query: 21 KQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPG 80
K ++ L DPE+ II+ E RQ ++LI SENFT+ SV A+G+ + NKYSEGYPG
Sbjct: 11 KMVSGHLSETDPEVEQIIKDEVDRQKHSIDLIASENFTTTSVFDALGTPLCNKYSEGYPG 70
Query: 81 ARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIM 140
ARYYGGNE+ID E LCQ+RALEAF + P++WGVNVQ+LSGSP+N QVY AL+KPH+R+M
Sbjct: 71 ARYYGGNEHIDRIERLCQQRALEAFHVTPDRWGVNVQTLSGSPANLQVYQALMKPHERLM 130
Query: 141 ALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIV 200
L LP GGHLSHGY T+ +KISAVS +FE+ PYR+N TG IDYD LEK+A L+RPK++V
Sbjct: 131 GLYLPDGGHLSHGYATENRKISAVSTYFESFPYRVNPETGIIDYDTLEKNAILYRPKILV 190
Query: 201 AGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSL 260
AG SAY RL DY+R+R++ +K A ++ DMAHISGLVAAGVIPSPFEYAD+VTTTTHKSL
Sbjct: 191 AGTSAYCRLIDYKRMREIADKCGAYLMVDMAHISGLVAAGVIPSPFEYADIVTTTTHKSL 250
Query: 261 RGPRGAMIFFRKGVKEIN-KQGKEF 284
RGPRGAMIFFR+G++ +N K GKE
Sbjct: 251 RGPRGAMIFFRRGIRSVNQKTGKEI 275
>sp|P37291|GLYC_YEAST Serine hydroxymethyltransferase, cytosolic OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=SHM2 PE=1
SV=2
Length = 469
Score = 373 bits (958), Expect = e-103, Method: Compositional matrix adjust.
Identities = 174/264 (65%), Positives = 215/264 (81%), Gaps = 1/264 (0%)
Query: 21 KQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPG 80
K + + L DPE+ II+ E RQ ++LI SENFTS SV A+G+ ++NKYSEGYPG
Sbjct: 11 KLITSHLVDTDPEVDSIIKDEIERQKHSIDLIASENFTSTSVFDALGTPLSNKYSEGYPG 70
Query: 81 ARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIM 140
ARYYGGNE+ID E LCQ+RAL+AF + P+KWGVNVQ+LSGSP+N QVY A++KPH+R+M
Sbjct: 71 ARYYGGNEHIDRMEILCQQRALKAFHVTPDKWGVNVQTLSGSPANLQVYQAIMKPHERLM 130
Query: 141 ALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIV 200
L LP GGHLSHGY T+ +KISAVS +FE+ PYR+N TG IDYD LEK+A L+RPK++V
Sbjct: 131 GLYLPDGGHLSHGYATENRKISAVSTYFESFPYRVNPETGIIDYDTLEKNAILYRPKVLV 190
Query: 201 AGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSL 260
AG SAY RL DY+R+R++ +K A ++ DMAHISGL+AAGVIPSPFEYAD+VTTTTHKSL
Sbjct: 191 AGTSAYCRLIDYKRMREIADKCGAYLMVDMAHISGLIAAGVIPSPFEYADIVTTTTHKSL 250
Query: 261 RGPRGAMIFFRKGVKEIN-KQGKE 283
RGPRGAMIFFR+GV+ IN K GKE
Sbjct: 251 RGPRGAMIFFRRGVRSINPKTGKE 274
>sp|Q75BQ6|GLYC_ASHGO Serine hydroxymethyltransferase, cytosolic OS=Ashbya gossypii
(strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL
Y-1056) GN=SHM2 PE=3 SV=2
Length = 469
Score = 371 bits (953), Expect = e-102, Method: Compositional matrix adjust.
Identities = 173/264 (65%), Positives = 215/264 (81%), Gaps = 1/264 (0%)
Query: 21 KQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPG 80
K +++ L DPE+ II+ E RQ + LI SEN TS +V A+G+ M NKYSEGYPG
Sbjct: 11 KLISSHLSESDPEVDAIIKDEIDRQKHSIVLIASENLTSTAVFDALGTPMCNKYSEGYPG 70
Query: 81 ARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIM 140
ARYYGGN++ID E LCQ+RALEAF + P++WGVNVQSLSGSP+N QVY AL+KPH+R+M
Sbjct: 71 ARYYGGNQHIDRMELLCQRRALEAFHVTPDRWGVNVQSLSGSPANLQVYQALMKPHERLM 130
Query: 141 ALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIV 200
L LP GGHLSHGYQT+T+KISAVS +FE+ PYR++ TG IDYD LEK+A L+RPK++V
Sbjct: 131 GLHLPDGGHLSHGYQTETRKISAVSTYFESFPYRVDPETGIIDYDTLEKNAVLYRPKILV 190
Query: 201 AGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSL 260
AG SAY RL DY+R+R++ +K A ++ DMAHISGLVAAGVIPSPFEYAD+VTTTTHKSL
Sbjct: 191 AGTSAYCRLIDYKRMREIADKVGAYLMVDMAHISGLVAAGVIPSPFEYADIVTTTTHKSL 250
Query: 261 RGPRGAMIFFRKGVKEIN-KQGKE 283
RGPRGAMIFFR+GV+ ++ K G+E
Sbjct: 251 RGPRGAMIFFRRGVRSVHPKTGEE 274
>sp|Q7S5N8|GLYM_NEUCR Putative serine hydroxymethyltransferase, mitochondrial
OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A /
CBS 708.71 / DSM 1257 / FGSC 987) GN=NCU05805 PE=3 SV=1
Length = 527
Score = 369 bits (947), Expect = e-101, Method: Compositional matrix adjust.
Identities = 165/235 (70%), Positives = 203/235 (86%)
Query: 49 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLD 108
+ LIPSENFTS +V+ A+GS M NKYSEGYPGARYYGGNE+ID +E LCQ RALE F LD
Sbjct: 77 INLIPSENFTSQAVLDALGSPMQNKYSEGYPGARYYGGNEFIDASERLCQDRALETFGLD 136
Query: 109 PEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFF 168
P++WGVNVQ+LSG+P+N VY+AL+ HDR+M LDLPHGGHLSHGYQT TKKIS +S +F
Sbjct: 137 PKEWGVNVQALSGAPANLYVYSALMDTHDRLMGLDLPHGGHLSHGYQTPTKKISFISKYF 196
Query: 169 ETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 228
ET+PYRL+E TGYIDY++LE+ A +RPK+IVAGASAY+RL DY R+R++C+K A ++A
Sbjct: 197 ETLPYRLDEKTGYIDYNKLEELAITYRPKIIVAGASAYSRLIDYARLREICDKVNAYLMA 256
Query: 229 DMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKE 283
DMAHISGLVAA V+P PF +AD+VTTT+HKSLRGPRGAMIFFR+GV+ NK+G+E
Sbjct: 257 DMAHISGLVAAKVMPGPFTHADIVTTTSHKSLRGPRGAMIFFRRGVRRTNKKGEE 311
>sp|P34897|GLYM_HUMAN Serine hydroxymethyltransferase, mitochondrial OS=Homo sapiens
GN=SHMT2 PE=1 SV=3
Length = 504
Score = 369 bits (946), Expect = e-101, Method: Compositional matrix adjust.
Identities = 170/255 (66%), Positives = 209/255 (81%), Gaps = 1/255 (0%)
Query: 31 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYI 90
DPE+ ++++ EK RQ +GLELI SENF S + ++A+GS + NKYSEGYPG RYYGG E +
Sbjct: 53 DPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVV 112
Query: 91 DMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHL 150
D E LCQ+RALEAF LDP +WGVNVQ SGSP+N VYTALL+PHDRIM LDLP GGHL
Sbjct: 113 DEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHL 172
Query: 151 SHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLY 210
+HGY +D K+ISA SIFFE+MPY+LN TG IDY+QL +A LFRP+LI+AG SAYARL
Sbjct: 173 THGYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARLFRPRLIIAGTSAYARLI 232
Query: 211 DYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFF 270
DY R+R+VC++ KA +LADMAHISGLVAA VIPSPF++AD+VTTTTHK+LRG R +IF+
Sbjct: 233 DYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHADIVTTTTHKTLRGARSGLIFY 292
Query: 271 RKGVKEIN-KQGKEF 284
RKGVK ++ K G+E
Sbjct: 293 RKGVKAVDPKTGREI 307
>sp|Q758F0|GLYM_ASHGO Serine hydroxymethyltransferase, mitochondrial OS=Ashbya gossypii
(strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL
Y-1056) GN=SHM1 PE=3 SV=1
Length = 497
Score = 367 bits (941), Expect = e-101, Method: Compositional matrix adjust.
Identities = 167/263 (63%), Positives = 215/263 (81%), Gaps = 1/263 (0%)
Query: 23 LNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGAR 82
L+ ++ DPE+ DI+ E++RQ + + LIPSENFTSV+VM +GS M NKYSEGYPG R
Sbjct: 36 LSQHVQEFDPEMYDILTKERSRQKRSITLIPSENFTSVAVMNLLGSEMQNKYSEGYPGQR 95
Query: 83 YYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMAL 142
YYGGN+YIDMAESLCQKRALE + LDP KWGVNVQSLSG+P+N Y+A+++ DR+M L
Sbjct: 96 YYGGNQYIDMAESLCQKRALELYGLDPAKWGVNVQSLSGAPANLYAYSAIMEVGDRMMGL 155
Query: 143 DLPHGGHLSHGYQ-TDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA 201
DLPHGGHLSHGYQ + KIS +S +F+TM YR++ +TG +DYD L +++ LFRPK+IVA
Sbjct: 156 DLPHGGHLSHGYQLQNGNKISYISKYFQTMAYRVDPATGLVDYDTLSETSKLFRPKVIVA 215
Query: 202 GASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLR 261
G SAYAR+ DY+R R++ + A +L+DMAH+SGLVAAGV PSPFEY+D+VTTTTHKSLR
Sbjct: 216 GTSAYARVLDYKRFREIADACGAYLLSDMAHVSGLVAAGVHPSPFEYSDIVTTTTHKSLR 275
Query: 262 GPRGAMIFFRKGVKEINKQGKEF 284
GPRGAMIF+RKG++++ K+G E
Sbjct: 276 GPRGAMIFYRKGIRKVTKKGTEI 298
>sp|P34898|GLYC_NEUCR Serine hydroxymethyltransferase, cytosolic OS=Neurospora crassa
(strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257
/ FGSC 987) GN=for PE=3 SV=2
Length = 480
Score = 367 bits (941), Expect = e-101, Method: Compositional matrix adjust.
Identities = 172/254 (67%), Positives = 207/254 (81%), Gaps = 1/254 (0%)
Query: 31 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYI 90
DP++A+I++ E RQ + + LI SEN TS +V A+GS M+NKYSEG PGARYYGGN++I
Sbjct: 22 DPQVAEIMKKEVQRQRESIILIASENVTSRAVFDALGSPMSNKYSEGLPGARYYGGNQHI 81
Query: 91 DMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHL 150
D E LCQ RALEAF LDP++WGVNVQ LSGSP+N QVY A++ H R+M LDLPHGGHL
Sbjct: 82 DEIEVLCQNRALEAFHLDPKQWGVNVQCLSGSPANLQVYQAIMPVHGRLMGLDLPHGGHL 141
Query: 151 SHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLY 210
SHGYQT +KISAVS +FETMPYR+N TG IDYD LEK+A LFRPK++VAG SAY RL
Sbjct: 142 SHGYQTPQRKISAVSTYFETMPYRVNIDTGLIDYDTLEKNAQLFRPKVLVAGTSAYCRLI 201
Query: 211 DYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFF 270
DYER+RK+ + A ++ DMAHISGL+A+ VIPSPF YADVVTTTTHKSLRGPRGAMIFF
Sbjct: 202 DYERMRKIADSVGAYLVVDMAHISGLIASEVIPSPFLYADVVTTTTHKSLRGPRGAMIFF 261
Query: 271 RKGVKEIN-KQGKE 283
R+GV+ ++ K GKE
Sbjct: 262 RRGVRSVDAKTGKE 275
>sp|Q3SZ20|GLYM_BOVIN Serine hydroxymethyltransferase, mitochondrial OS=Bos taurus
GN=SHMT2 PE=2 SV=1
Length = 504
Score = 365 bits (938), Expect = e-100, Method: Compositional matrix adjust.
Identities = 168/255 (65%), Positives = 207/255 (81%), Gaps = 1/255 (0%)
Query: 31 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYI 90
DPE+ +++ EK RQ +GLELI SENF S + ++A+GS + NKYSEGYPG RYYGG E +
Sbjct: 53 DPEMWELLRREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVV 112
Query: 91 DMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHL 150
D E LCQ+RALEAF LDP +WGVNVQ SGSP+N YTALL+PHDRIM LDLP GGHL
Sbjct: 113 DEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAAYTALLQPHDRIMGLDLPDGGHL 172
Query: 151 SHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLY 210
+HGY +D K+ISA SIFFE+MPY+LN TG IDYDQL +A LF+P+LI+AG SAYARL
Sbjct: 173 THGYMSDVKRISATSIFFESMPYKLNPQTGLIDYDQLALTARLFKPRLIIAGTSAYARLI 232
Query: 211 DYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFF 270
DY R+R+VC++ KA +LADMAHISGLVAA VIPSPF++AD+VTTTTHK+LRG R +IF+
Sbjct: 233 DYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHADIVTTTTHKTLRGARSGLIFY 292
Query: 271 RKGVKEIN-KQGKEF 284
RKGV+ ++ K G+E
Sbjct: 293 RKGVQAVDPKTGREI 307
>sp|P14519|GLYM_RABIT Serine hydroxymethyltransferase, mitochondrial OS=Oryctolagus
cuniculus GN=SHMT2 PE=1 SV=2
Length = 504
Score = 364 bits (934), Expect = e-100, Method: Compositional matrix adjust.
Identities = 168/259 (64%), Positives = 208/259 (80%), Gaps = 1/259 (0%)
Query: 27 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGG 86
L DPE+ ++++ EK RQ +GLELI SENF + ++A+GS + NKYSEGYPG RYYGG
Sbjct: 49 LSDTDPEMWELLQREKDRQCRGLELIASENFCIRAALEALGSCLNNKYSEGYPGKRYYGG 108
Query: 87 NEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPH 146
E +D E LCQ+RALEAF LDP +WGVNVQ SGSP+N YTALL+PHDRIM LDLP
Sbjct: 109 AEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAAYTALLQPHDRIMGLDLPD 168
Query: 147 GGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY 206
GGHL+HGY +D K++SA SIFFE+MPY+LN TG IDY+QL +A LFRP+LI+AG SAY
Sbjct: 169 GGHLTHGYMSDVKRVSATSIFFESMPYKLNPQTGLIDYEQLALTARLFRPRLIIAGTSAY 228
Query: 207 ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGA 266
ARL DY R+R+VC++ KA +LADMAHISGLVAA VIPSPF++ADVVTTTTHK+LRG R
Sbjct: 229 ARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHADVVTTTTHKTLRGARSG 288
Query: 267 MIFFRKGVKEIN-KQGKEF 284
+IF+RKGV+ ++ K G+E
Sbjct: 289 LIFYRKGVRTVDPKTGQEI 307
>sp|Q54Z26|GLYC1_DICDI Serine hydroxymethyltransferase 1 OS=Dictyostelium discoideum
GN=shmt1 PE=1 SV=1
Length = 457
Score = 363 bits (931), Expect = e-99, Method: Compositional matrix adjust.
Identities = 170/261 (65%), Positives = 212/261 (81%), Gaps = 2/261 (0%)
Query: 24 NAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARY 83
N PL+ VD EI +++ EK RQ+KGLELI SENFTS +VM+A+GS TNKY+EGYPG+RY
Sbjct: 7 NTPLKEVDNEIFELMNREKDRQFKGLELIASENFTSRAVMEALGSHFTNKYAEGYPGSRY 66
Query: 84 YGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALD 143
YGG E +D E+LCQKRAL+AFRLD KWGVNVQ SGSP+NF VYTALL+PHDRIM LD
Sbjct: 67 YGGTEVVDELETLCQKRALKAFRLDESKWGVNVQPYSGSPANFAVYTALLRPHDRIMGLD 126
Query: 144 LPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGA 203
LP GGHL+HGYQTD KKISA SIFFE+MPY++ + G IDY +LE++A LF+PKLI++GA
Sbjct: 127 LPSGGHLTHGYQTDKKKISASSIFFESMPYQIG-ADGLIDYQRLEENALLFKPKLIISGA 185
Query: 204 SAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGP 263
SAY R +DY+R+R + +K A ++ DMAH SGLVAA ++ SPF+Y DVVT+TTHK+LRGP
Sbjct: 186 SAYPREWDYKRMRAIADKVGAYLMCDMAHYSGLVAAQLLDSPFDYCDVVTSTTHKTLRGP 245
Query: 264 RGAMIFFRKGVKEINKQGKEF 284
R +IFFR+G K ++ GKE
Sbjct: 246 RSGIIFFRRG-KRVDGNGKEI 265
>sp|Q6CLQ5|GLYM_KLULA Serine hydroxymethyltransferase, mitochondrial OS=Kluyveromyces
lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC
1267 / NRRL Y-1140 / WM37) GN=SHM1 PE=3 SV=1
Length = 498
Score = 361 bits (927), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 165/255 (64%), Positives = 209/255 (81%), Gaps = 1/255 (0%)
Query: 30 VDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEY 89
+DPE+ DI+ E+ RQ + LIPSENFTS SVM +GS M NKYSEGYPG RYYGGN++
Sbjct: 44 IDPEMYDILTKERKRQKHSITLIPSENFTSKSVMDLLGSEMQNKYSEGYPGERYYGGNQF 103
Query: 90 IDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGH 149
IDMAESLCQKRALE + LDP+ WGVNVQ LSG+P+N Y+A+++ +DR+M LDLPHGGH
Sbjct: 104 IDMAESLCQKRALELYNLDPQLWGVNVQPLSGAPANLYAYSAVMETNDRLMGLDLPHGGH 163
Query: 150 LSHGYQTDT-KKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYAR 208
LSHGYQ + KIS +S +F+TMPY ++ TG IDYD L K++ LFRPK+IVAGASAY+R
Sbjct: 164 LSHGYQLPSGTKISYISKYFQTMPYHVDSQTGIIDYDFLSKTSKLFRPKVIVAGASAYSR 223
Query: 209 LYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMI 268
+ DY+R +++ + A +++DMAHISGLVAAGV SPFEY+D+VTTTTHKSLRGPRGAMI
Sbjct: 224 VLDYKRFKEIADACGAYLMSDMAHISGLVAAGVTRSPFEYSDIVTTTTHKSLRGPRGAMI 283
Query: 269 FFRKGVKEINKQGKE 283
F+RKGV+++ K+GKE
Sbjct: 284 FYRKGVRKVTKKGKE 298
>sp|P35623|GLYC_SHEEP Serine hydroxymethyltransferase, cytosolic OS=Ovis aries GN=SHMT1
PE=1 SV=3
Length = 484
Score = 360 bits (925), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 169/264 (64%), Positives = 208/264 (78%), Gaps = 1/264 (0%)
Query: 21 KQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPG 80
K L PL+ D E+ +II+ E RQ GLELI SENF S +V++A+GS + NKYSEGYPG
Sbjct: 20 KMLAQPLKDNDVEVYNIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSEGYPG 79
Query: 81 ARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIM 140
RYYGG E+ID E LCQKRAL+ + LDPE WGVNVQ SGSP+NF VYTAL++PH RIM
Sbjct: 80 QRYYGGTEFIDELEVLCQKRALQVYGLDPECWGVNVQPYSGSPANFAVYTALVEPHGRIM 139
Query: 141 ALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIV 200
LDLP GGHL+HG+ TD KKISA SIFFE+MPY++N TGYI+YDQLE++A LF P+LI+
Sbjct: 140 GLDLPDGGHLTHGFMTDKKKISATSIFFESMPYKVNPDTGYINYDQLEENARLFHPRLII 199
Query: 201 AGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSL 260
AG S Y+R DY R+RK+ + A ++ADMAHISGLVAAGV+PSPFE+ VV+TTTHK+L
Sbjct: 200 AGTSCYSRNLDYARLRKIADDNGAYLMADMAHISGLVAAGVVPSPFEHCHVVSTTTHKTL 259
Query: 261 RGPRGAMIFFRKGVKEIN-KQGKE 283
RG R MIF+RKGV+ ++ K GKE
Sbjct: 260 RGCRAGMIFYRKGVRSVDPKTGKE 283
>sp|Q54EW1|GLYC2_DICDI Serine hydroxymethyltransferase 2 OS=Dictyostelium discoideum
GN=shmt2 PE=3 SV=1
Length = 481
Score = 355 bits (911), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 164/249 (65%), Positives = 199/249 (79%), Gaps = 1/249 (0%)
Query: 24 NAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARY 83
N + DPEI D++ EK RQ+ GLELI SENFTS +VM+++GS TNKY+EG PGARY
Sbjct: 31 NRSVSESDPEIYDLMMKEKQRQFTGLELIASENFTSRAVMESIGSCFTNKYAEGLPGARY 90
Query: 84 YGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALD 143
YGGNE +D E+LC KRALE F L+PE+WGVNVQ SGS +NF +T LLKPHDRIM LD
Sbjct: 91 YGGNEVVDQLENLCIKRALETFNLNPEEWGVNVQPYSGSTANFAAFTGLLKPHDRIMGLD 150
Query: 144 LPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGA 203
LP GGHL+HGYQTD KKISA SIFFE+MPY++NE TGY+DY+++E +A LFRPKL++AGA
Sbjct: 151 LPSGGHLTHGYQTDKKKISATSIFFESMPYQVNE-TGYVDYNKMEANAALFRPKLLIAGA 209
Query: 204 SAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGP 263
SAY R +DYER+RK+ +K A +L DMAHISG+VA SPF + DVVTTTTHK+LRGP
Sbjct: 210 SAYPREWDYERMRKIADKHGAYLLCDMAHISGMVAGKQAISPFLFCDVVTTTTHKTLRGP 269
Query: 264 RGAMIFFRK 272
R +IFFRK
Sbjct: 270 RAGLIFFRK 278
>sp|Q5E9P9|GLYC_BOVIN Serine hydroxymethyltransferase, cytosolic OS=Bos taurus GN=SHMT1
PE=2 SV=3
Length = 484
Score = 355 bits (910), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 165/264 (62%), Positives = 207/264 (78%), Gaps = 1/264 (0%)
Query: 21 KQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPG 80
K L PL+ D E+ +II+ E RQ GLELI SENF S +V++A+GS + NKYSEGYPG
Sbjct: 20 KMLAQPLKDNDVEVYNIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSEGYPG 79
Query: 81 ARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIM 140
RYYGG E+ID E LCQKRAL+ + LD + WGVNVQ SGSP+NF VYTAL++PH RIM
Sbjct: 80 QRYYGGTEFIDELEVLCQKRALQVYGLDSQCWGVNVQPYSGSPANFAVYTALVEPHGRIM 139
Query: 141 ALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIV 200
LDLP GGHL+HG+ TD KKISA SIFFE+MPY++N TGYI+YDQLE++A LF P+LI+
Sbjct: 140 GLDLPDGGHLTHGFMTDKKKISATSIFFESMPYKVNPDTGYINYDQLEENARLFHPRLII 199
Query: 201 AGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSL 260
AG S Y+R DY R+RK+ + A ++ADMAH+SGLVAAGV+PSPFE+ VV+TTTHK+L
Sbjct: 200 AGTSCYSRNLDYARLRKIADDNGAYLMADMAHVSGLVAAGVVPSPFEHCHVVSTTTHKTL 259
Query: 261 RGPRGAMIFFRKGVKEIN-KQGKE 283
RG R MIF+RKGV+ ++ K G+E
Sbjct: 260 RGCRAGMIFYRKGVRSVDPKTGRE 283
>sp|Q6FQ44|GLYM_CANGA Serine hydroxymethyltransferase, mitochondrial OS=Candida glabrata
(strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 /
NRRL Y-65) GN=SHM1 PE=3 SV=1
Length = 485
Score = 350 bits (897), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 165/259 (63%), Positives = 206/259 (79%), Gaps = 2/259 (0%)
Query: 27 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGG 86
++ VDPE+ I+ E++RQ + LIPSENFTS +VM +GS M NKYSEGYPG RYYGG
Sbjct: 27 VQEVDPEMFRILSDERSRQKHSVTLIPSENFTSKAVMDLLGSEMQNKYSEGYPGERYYGG 86
Query: 87 NEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPH 146
N++ID AESLCQ RAL+ + LDPEKWGVNVQ+LSG+P+N Y+A+++ DR+M LDLPH
Sbjct: 87 NQFIDKAESLCQARALDLYGLDPEKWGVNVQALSGAPANLYAYSAVMEVGDRLMGLDLPH 146
Query: 147 GGHLSHGYQTDT-KKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASA 205
GGHLSHGYQ + KIS +S +F TMPY +N TG IDYD L ++ LFRPK+IVAG SA
Sbjct: 147 GGHLSHGYQLPSGTKISYISKYFNTMPYHVNTETGIIDYDTLAMTSKLFRPKVIVAGTSA 206
Query: 206 YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG 265
Y+R DY R RK+ + A +L+DMAHISGLVAA VI SPFE++D+VTTTTHKSLRGPRG
Sbjct: 207 YSRKLDYARFRKIADGCGAYLLSDMAHISGLVAANVIDSPFEHSDIVTTTTHKSLRGPRG 266
Query: 266 AMIFFRKGVKEINKQ-GKE 283
AMIF+RKG+K++NK+ GKE
Sbjct: 267 AMIFYRKGIKKVNKKTGKE 285
>sp|P34896|GLYC_HUMAN Serine hydroxymethyltransferase, cytosolic OS=Homo sapiens GN=SHMT1
PE=1 SV=1
Length = 483
Score = 347 bits (891), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 171/265 (64%), Positives = 212/265 (80%), Gaps = 1/265 (0%)
Query: 21 KQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPG 80
K L PL+ D E+ +II+ E RQ GLELI SENF S +V++A+GS + NKYSEGYPG
Sbjct: 20 KMLAQPLKDSDVEVYNIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSEGYPG 79
Query: 81 ARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIM 140
RYYGG E+ID E+LCQKRAL+A++LDP+ WGVNVQ SGSP+NF VYTAL++PH RIM
Sbjct: 80 QRYYGGTEFIDELETLCQKRALQAYKLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIM 139
Query: 141 ALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIV 200
LDLP GGHL+HG+ TD KKISA SIFFE+MPY++N TGYI+YDQLE++A LF PKLI+
Sbjct: 140 GLDLPDGGHLTHGFMTDKKKISATSIFFESMPYKVNPDTGYINYDQLEENARLFHPKLII 199
Query: 201 AGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSL 260
AG S Y+R +Y R+RK+ ++ A ++ADMAHISGLVAAGV+PSPFE+ VVTTTTHK+L
Sbjct: 200 AGTSCYSRNLEYARLRKIADENGAYLMADMAHISGLVAAGVVPSPFEHCHVVTTTTHKTL 259
Query: 261 RGPRGAMIFFRKGVKEIN-KQGKEF 284
RG R MIF+RKGVK ++ K GKE
Sbjct: 260 RGCRAGMIFYRKGVKSVDPKTGKEI 284
>sp|P50431|GLYC_MOUSE Serine hydroxymethyltransferase, cytosolic OS=Mus musculus GN=Shmt1
PE=1 SV=3
Length = 478
Score = 345 bits (885), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 171/275 (62%), Positives = 213/275 (77%), Gaps = 4/275 (1%)
Query: 13 EKNGVTWP---KQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSV 69
+++ W K L+ PL+ D E+ II+ E RQ GLELI SENF S +V++A+GS
Sbjct: 3 DRDATLWASHEKMLSQPLKDSDAEVYSIIKKESNRQRVGLELIASENFASRAVLEALGSC 62
Query: 70 MTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVY 129
+ NKYSEGYPG RYYGG E+ID E LCQKRAL+A+ LDP+ WGVNVQ SGSP+NF VY
Sbjct: 63 LNNKYSEGYPGQRYYGGTEFIDELEMLCQKRALQAYHLDPQCWGVNVQPYSGSPANFAVY 122
Query: 130 TALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEK 189
TAL++PH RIM LDLP GGHL+HG+ TD KKISA SIFFE+MPY++ TGYI+YDQLE+
Sbjct: 123 TALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMPYKVYPETGYINYDQLEE 182
Query: 190 SATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYA 249
+A+LF PKLI+AG S Y+R DY R+RK+ + A ++ADMAHISGLVAAGV+PSPFE+
Sbjct: 183 NASLFHPKLIIAGTSCYSRNLDYARLRKIADDNGAYLMADMAHISGLVAAGVVPSPFEHC 242
Query: 250 DVVTTTTHKSLRGPRGAMIFFRKGVKEIN-KQGKE 283
VVTTTTHK+LRG R MIF+RKGV+ ++ K GKE
Sbjct: 243 HVVTTTTHKTLRGCRAGMIFYRKGVRSVDPKTGKE 277
>sp|Q5RFK5|GLYC_PONAB Serine hydroxymethyltransferase, cytosolic OS=Pongo abelii GN=SHMT1
PE=2 SV=1
Length = 483
Score = 343 bits (880), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 169/265 (63%), Positives = 210/265 (79%), Gaps = 1/265 (0%)
Query: 21 KQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPG 80
K L PL+ D E+ +II+ E RQ GLEL SENF S +V++A+GS + NKYSEGYPG
Sbjct: 20 KMLAQPLKDSDVEVYNIIKKESNRQRVGLELFASENFASQAVLEALGSCLNNKYSEGYPG 79
Query: 81 ARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIM 140
RYYGG E+ID E+LCQKRAL+A++LDP+ WGVNVQ SGSP+NF VYTAL++PH RIM
Sbjct: 80 QRYYGGTEFIDELETLCQKRALQAYKLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIM 139
Query: 141 ALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIV 200
LDLP GGHL+HG+ T KKISA SIFFE+MPY++N TGYI+YDQLE++A LF PKLI+
Sbjct: 140 GLDLPDGGHLTHGFMTGKKKISATSIFFESMPYKVNPDTGYINYDQLEENARLFHPKLII 199
Query: 201 AGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSL 260
AG S Y+R DY R+RK+ ++ A ++ADMAHISGLVAAGV+PSPFE+ VVTTTTHK+L
Sbjct: 200 AGTSCYSRNLDYARLRKIADENGAYLMADMAHISGLVAAGVVPSPFEHCHVVTTTTHKTL 259
Query: 261 RGPRGAMIFFRKGVKEIN-KQGKEF 284
RG R MIF+RKGV+ ++ K GKE
Sbjct: 260 RGCRAGMIFYRKGVQSVDPKTGKEI 284
>sp|P37292|GLYM_YEAST Serine hydroxymethyltransferase, mitochondrial OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=SHM1 PE=1
SV=2
Length = 490
Score = 343 bits (880), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 159/263 (60%), Positives = 203/263 (77%), Gaps = 1/263 (0%)
Query: 23 LNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGAR 82
++ P+ DPE+ DI++ E+ RQ + LIPSENFTS +VM +GS + NKYSEGYPG R
Sbjct: 29 VSKPVSEGDPEMFDILQQERHRQKHSITLIPSENFTSKAVMDLLGSELQNKYSEGYPGER 88
Query: 83 YYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMAL 142
YYGGNE ID +ESLCQ RALE + LDP KWGVNVQ LSG+P+N VY+A++ +R+M L
Sbjct: 89 YYGGNEIIDKSESLCQARALELYGLDPAKWGVNVQPLSGAPANLYVYSAIMNVGERLMGL 148
Query: 143 DLPHGGHLSHGYQTDT-KKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA 201
DLP GGHLSHGYQ + IS +S +F++MPY ++ +TG IDYD L+ A FRPK+IVA
Sbjct: 149 DLPDGGHLSHGYQLKSGTPISFISKYFQSMPYHVDHTTGLIDYDNLQVLAKAFRPKVIVA 208
Query: 202 GASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLR 261
G SAY+RL DY R +++ A +++DMAHISGLVAA V+PSPFE++D+VTTTTHKSLR
Sbjct: 209 GTSAYSRLIDYARFKEISQGCGAYLMSDMAHISGLVAANVVPSPFEHSDIVTTTTHKSLR 268
Query: 262 GPRGAMIFFRKGVKEINKQGKEF 284
GPRGAMIFFRKG+K + K+GKE
Sbjct: 269 GPRGAMIFFRKGIKSVTKKGKEI 291
>sp|P07511|GLYC_RABIT Serine hydroxymethyltransferase, cytosolic OS=Oryctolagus cuniculus
GN=SHMT1 PE=1 SV=2
Length = 484
Score = 341 bits (875), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 171/281 (60%), Positives = 214/281 (76%), Gaps = 4/281 (1%)
Query: 8 AVYEKEKNGVTWP---KQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQ 64
AV ++ W + L PL+ D E+ DII+ E RQ GLELI SENF S +V++
Sbjct: 4 AVNGAPRDAALWSSHEQMLAQPLKDSDAEVYDIIKKESNRQRVGLELIASENFASRAVLE 63
Query: 65 AVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPS 124
A+GS + NKYSEGYPG RYYGG E+ID E+LCQKRAL+A+ LDP+ WGVNVQ SGSP+
Sbjct: 64 ALGSCLNNKYSEGYPGQRYYGGTEHIDELETLCQKRALQAYGLDPQCWGVNVQPYSGSPA 123
Query: 125 NFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDY 184
NF VYTAL++PH RIM LDLP GGHL+HG+ TD KKISA SIFFE+M Y++N TGYIDY
Sbjct: 124 NFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPDTGYIDY 183
Query: 185 DQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPS 244
D+LE++A LF PKLI+AG S Y+R DY R+RK+ ++ A ++ADMAHISGLV AGV+PS
Sbjct: 184 DRLEENARLFHPKLIIAGTSCYSRNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPS 243
Query: 245 PFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEIN-KQGKEF 284
PFE+ VVTTTTHK+LRG R MIF+R+GV+ ++ K GKE
Sbjct: 244 PFEHCHVVTTTTHKTLRGCRAGMIFYRRGVRSVDPKTGKEI 284
>sp|O62585|GLYC_ENCCU Serine hydroxymethyltransferase, cytosolic OS=Encephalitozoon
cuniculi (strain GB-M1) GN=SHMT-1 PE=3 SV=2
Length = 460
Score = 296 bits (759), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 139/253 (54%), Positives = 184/253 (72%), Gaps = 1/253 (0%)
Query: 24 NAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARY 83
PLE+ DPE+ +I E RQ K + LI SEN+ S M+A GSV+TNKYSEG G RY
Sbjct: 11 TGPLEMADPELHALICGEVERQKKTINLIASENYAHQSAMEACGSVLTNKYSEGRVGERY 70
Query: 84 YGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALD 143
YGG ++D E LCQKRALE F LDP+ WGVNVQ SGSP+NF +YTA++ P RIM LD
Sbjct: 71 YGGTHWVDRIELLCQKRALELFGLDPDVWGVNVQPYSGSPANFAIYTAVVPPGGRIMGLD 130
Query: 144 LPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGA 203
LP GGHL+HGY+T T+KISA S++F++ PY + S G IDY+ LEK+ T F P +++ G
Sbjct: 131 LPSGGHLTHGYKTKTRKISASSVYFDSRPYTVG-SNGLIDYEGLEKTFTDFLPHILICGY 189
Query: 204 SAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGP 263
SAY+R DY+R++ + + A + AD++HIS LVA+G++ SPFE+ D+V TTT K LRGP
Sbjct: 190 SAYSRDIDYKRLQSIAGRNGAFLFADISHISPLVASGLMNSPFEHCDIVMTTTQKGLRGP 249
Query: 264 RGAMIFFRKGVKE 276
RGA+IF+R+ V +
Sbjct: 250 RGALIFYRRAVTK 262
>sp|B8FJ72|GLYA_DESAA Serine hydroxymethyltransferase OS=Desulfatibacillum alkenivorans
(strain AK-01) GN=glyA PE=3 SV=1
Length = 413
Score = 258 bits (660), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 138/260 (53%), Positives = 168/260 (64%), Gaps = 15/260 (5%)
Query: 30 VDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEY 89
VDPE A IE E RQ LELI SEN S +VM A GSVMTNKY+EGYPG RYYGG E+
Sbjct: 9 VDPEAAKAIEQELDRQQFTLELIASENIASPAVMAAQGSVMTNKYAEGYPGHRYYGGCEF 68
Query: 90 IDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGH 149
+D+AE+L + RA E F+ D NVQ SGS +N VY ALL+P D ++ +DL HGGH
Sbjct: 69 VDVAENLARDRAKELFQADY----ANVQPHSGSQANMGVYFALLEPGDTVLGMDLSHGGH 124
Query: 150 LSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARL 209
L+HG +S F + Y + E TG IDYDQL A +PKLIVAGASAY R+
Sbjct: 125 LTHG-----SPVSFSGRIFNFIHYGVKEKTGTIDYDQLRSLAKEHKPKLIVAGASAYPRI 179
Query: 210 YDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIF 269
D+ + K+ + A ++ DMAHI+GLVAAG PSP YADVVTTTTHK+LRGPRG MI
Sbjct: 180 IDFPELEKIARETGAYLMVDMAHIAGLVAAGEHPSPLPYADVVTTTTHKTLRGPRGGMIL 239
Query: 270 FRKGVKEINKQGKEFTCRCF 289
KG GK+ + + F
Sbjct: 240 SNKGF------GKKLSSQIF 253
>sp|Q01QZ0|GLYA_SOLUE Serine hydroxymethyltransferase OS=Solibacter usitatus (strain
Ellin6076) GN=glyA PE=3 SV=1
Length = 426
Score = 256 bits (654), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 133/264 (50%), Positives = 180/264 (68%), Gaps = 10/264 (3%)
Query: 17 VTWPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSE 76
+T ++++ L VDPEI I+HE ARQ LELI SENFTS +V++A GSV TNKY+E
Sbjct: 1 MTESQRMSRTLAEVDPEIYQAIQHETARQDGQLELIASENFTSEAVLEATGSVFTNKYAE 60
Query: 77 GYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPH 136
GYPG RYYGG EY D+ E+L ++RA + F + VNVQ SGS +N Y A++ P
Sbjct: 61 GYPGKRYYGGCEYTDVVENLARERASKLFGAEY----VNVQPHSGSQANQAAYGAVVSPG 116
Query: 137 DRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRP 196
D +M L+L HGGHL+HG+ + + ++ +PY + + IDYD++EK A +P
Sbjct: 117 DTVMGLNLAHGGHLTHGHALNFSGKT-----YKIVPYNVRKEDELIDYDEVEKLAREHQP 171
Query: 197 KLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTT 256
K+I+AGASAY R+ D+ R RK+ + A+ L DMAHISGLVAAGV P+P E+AD+VT+TT
Sbjct: 172 KMIIAGASAYPRIIDFARFRKIADAVGAVFLVDMAHISGLVAAGVHPNPCEFADIVTSTT 231
Query: 257 HKSLRGPRGAMIFFR-KGVKEINK 279
HK+LRGPR +I R K KEI+K
Sbjct: 232 HKTLRGPRAGIILAREKYGKEIDK 255
>sp|B0K631|GLYA_THEPX Serine hydroxymethyltransferase OS=Thermoanaerobacter sp. (strain
X514) GN=glyA PE=3 SV=1
Length = 413
Score = 255 bits (651), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 126/242 (52%), Positives = 168/242 (69%), Gaps = 9/242 (3%)
Query: 31 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYI 90
DPEIAD IE E RQ +ELI SENF S +VM+A+GS +TNKY+EGYP RYYGG EY+
Sbjct: 10 DPEIADAIEKELIRQRNKIELIASENFVSRAVMEAMGSPLTNKYAEGYPNKRYYGGCEYV 69
Query: 91 DMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHL 150
D+AE L ++R + F + NVQ SG+ +N Y AL+KP D ++ +DL HGGHL
Sbjct: 70 DIAEELARERLKKLFGAEH----ANVQPHSGAQANMAAYFALIKPGDTVLGMDLAHGGHL 125
Query: 151 SHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLY 210
+HG K++ + + Y + E TGYIDYD++E+ A +PKLIVAGASAY R+
Sbjct: 126 THG-----SKVNFSGQIYNFVSYGVREDTGYIDYDEVERVAKKHKPKLIVAGASAYPRII 180
Query: 211 DYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFF 270
D++R R++ +K A ++ DMAHI+GLVAAG+ P+P YADVVTTTTHK+LRGPRG I
Sbjct: 181 DFKRFREIADKVGAYLMVDMAHIAGLVAAGLHPNPVPYADVVTTTTHKTLRGPRGGAILC 240
Query: 271 RK 272
++
Sbjct: 241 KE 242
>sp|B0K742|GLYA_THEP3 Serine hydroxymethyltransferase OS=Thermoanaerobacter
pseudethanolicus (strain ATCC 33223 / 39E) GN=glyA PE=3
SV=1
Length = 413
Score = 255 bits (651), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 126/242 (52%), Positives = 168/242 (69%), Gaps = 9/242 (3%)
Query: 31 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYI 90
DPEIAD IE E RQ +ELI SENF S +VM+A+GS +TNKY+EGYP RYYGG EY+
Sbjct: 10 DPEIADAIEKELIRQRNKIELIASENFVSRAVMEAMGSPLTNKYAEGYPNKRYYGGCEYV 69
Query: 91 DMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHL 150
D+AE L ++R + F + NVQ SG+ +N Y AL+KP D ++ +DL HGGHL
Sbjct: 70 DIAEELARERLKKLFGAEH----ANVQPHSGAQANMAAYFALIKPGDTVLGMDLAHGGHL 125
Query: 151 SHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLY 210
+HG K++ + + Y + E TGYIDYD++E+ A +PKLIVAGASAY R+
Sbjct: 126 THG-----SKVNFSGQIYNFVSYGVREDTGYIDYDEVERVAKKHKPKLIVAGASAYPRII 180
Query: 211 DYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFF 270
D++R R++ +K A ++ DMAHI+GLVAAG+ P+P YADVVTTTTHK+LRGPRG I
Sbjct: 181 DFKRFREIADKVGAYLMVDMAHIAGLVAAGLHPNPVPYADVVTTTTHKTLRGPRGGAILC 240
Query: 271 RK 272
++
Sbjct: 241 KE 242
>sp|Q8R887|GLYA_THETN Serine hydroxymethyltransferase OS=Thermoanaerobacter tengcongensis
(strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4)
GN=glyA PE=3 SV=1
Length = 413
Score = 254 bits (649), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 126/242 (52%), Positives = 168/242 (69%), Gaps = 9/242 (3%)
Query: 31 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYI 90
DPEIA++I E RQ +ELI SENF S +VM+A+G+ +TNKY+EGYPG RYYGG EY+
Sbjct: 10 DPEIAEVILKELNRQRNKIELIASENFVSRAVMEAMGTPLTNKYAEGYPGRRYYGGCEYV 69
Query: 91 DMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHL 150
DMAE L ++R + F + NVQ SG+ +N Y ALLKP D ++ +DL HGGHL
Sbjct: 70 DMAEELARERLKKLFGAE----HANVQPHSGAQANMAAYFALLKPGDTVLGMDLAHGGHL 125
Query: 151 SHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLY 210
+HG K++ + + Y + E TGYIDYDQ+E A +PKLIVAGASAY R+
Sbjct: 126 THG-----SKVNFSGQIYNFVSYGVREDTGYIDYDQVEDLAKKHKPKLIVAGASAYPRII 180
Query: 211 DYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFF 270
D+++ R++ +K A ++ DMAHI+GLVAAG+ P+P YADVVTTTTHK+LRGPRG I
Sbjct: 181 DFKKFREIADKVGAYLMVDMAHIAGLVAAGLHPNPVPYADVVTTTTHKTLRGPRGGAILC 240
Query: 271 RK 272
++
Sbjct: 241 KQ 242
>sp|Q39V87|GLYA_GEOMG Serine hydroxymethyltransferase OS=Geobacter metallireducens
(strain GS-15 / ATCC 53774 / DSM 7210) GN=glyA PE=3 SV=1
Length = 415
Score = 251 bits (642), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 125/246 (50%), Positives = 167/246 (67%), Gaps = 9/246 (3%)
Query: 27 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGG 86
LE DP +A+ I HE RQ LELI SENF S +VM+A GSV+TNKY+EGYPG RYYGG
Sbjct: 4 LETFDPAVAEAIRHETERQEYNLELIASENFVSEAVMEAQGSVLTNKYAEGYPGKRYYGG 63
Query: 87 NEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPH 146
++D+ E+L +RA E F D NVQ SGS +N VY ++LKP D I+ ++L H
Sbjct: 64 CHHVDVVENLAIERAKELFGADH----ANVQPHSGSQANMAVYFSVLKPGDTILGMNLSH 119
Query: 147 GGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY 206
GGHL+HG ++ FF +PY +++ T ID++++E+ A +PKLIV GASAY
Sbjct: 120 GGHLTHG-----SPVNFSGRFFNVVPYGVSQETETIDFNEVERLALEHKPKLIVVGASAY 174
Query: 207 ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGA 266
R+ D+ R + +K A+++ DMAHI+GLVAAG+ PSP YA+ VTTTTHK+LRGPRG
Sbjct: 175 PRVLDFAAFRAIADKVGALVMVDMAHIAGLVAAGLHPSPVPYAEFVTTTTHKTLRGPRGG 234
Query: 267 MIFFRK 272
MI R+
Sbjct: 235 MILCRE 240
>sp|A6Q478|GLYA_NITSB Serine hydroxymethyltransferase OS=Nitratiruptor sp. (strain
SB155-2) GN=glyA PE=3 SV=1
Length = 415
Score = 251 bits (641), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 128/239 (53%), Positives = 169/239 (70%), Gaps = 10/239 (4%)
Query: 31 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYI 90
DP + +I E E RQ LE+I SENFTS +VM+A+GSV TNKY+EGYPG RYYGG EY
Sbjct: 8 DPAVYEIFEKELQRQTDHLEMIASENFTSPAVMEAMGSVFTNKYAEGYPGKRYYGGCEYA 67
Query: 91 DMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHL 150
D E L +RA E F + VNVQ SGS +N VY ALLKP+D+I+ +DL HGGHL
Sbjct: 68 DAIEELAIQRAKELFGCE----FVNVQPHSGSQANQGVYLALLKPYDKILGMDLSHGGHL 123
Query: 151 SHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLY 210
+HG K++A +++ Y +N+ G+IDYD++ A + +PKLIV GASAY R+
Sbjct: 124 THG-----AKVNASGKIYQSFFYGVNDE-GWIDYDRVLDIAKIVKPKLIVCGASAYPRVI 177
Query: 211 DYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIF 269
D+++ R++ ++ A+++AD+AHI+GLVAAG PSPF Y DVVTTTTHK+LRGPRG MI
Sbjct: 178 DFKKFREIADEVGALLMADIAHIAGLVAAGEHPSPFPYCDVVTTTTHKTLRGPRGGMIM 236
>sp|C6E348|GLYA_GEOSM Serine hydroxymethyltransferase OS=Geobacter sp. (strain M21)
GN=glyA PE=3 SV=1
Length = 415
Score = 251 bits (640), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 124/246 (50%), Positives = 167/246 (67%), Gaps = 9/246 (3%)
Query: 27 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGG 86
LE DP +A++I HE RQ LELI SENF S +V++A GSV+TNKY+EGYPG RYYGG
Sbjct: 4 LETFDPAVAEVIRHETERQEYNLELIASENFVSPAVLEAQGSVLTNKYAEGYPGKRYYGG 63
Query: 87 NEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPH 146
+D+ E+L RA E F D VNVQ SGS +N VY ++LKP D ++ ++L H
Sbjct: 64 CHCVDVVENLAIDRAKELFGADH----VNVQPHSGSQANMAVYFSVLKPGDTVLGMNLAH 119
Query: 147 GGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY 206
GGHL+HG ++ F +PY +++ T IDY++ E+ A +PK+IV GASAY
Sbjct: 120 GGHLTHG-----SPVNFSGKLFNIVPYGVSKETQTIDYEETERLALEHKPKMIVVGASAY 174
Query: 207 ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGA 266
R+ D+E R++ +K A+++ DMAHI+GLVAAG+ PSP YA+ VTTTTHK+LRGPRG
Sbjct: 175 PRIIDFEAFRRIADKVGAVVMVDMAHIAGLVAAGLHPSPVPYAEFVTTTTHKTLRGPRGG 234
Query: 267 MIFFRK 272
MI R+
Sbjct: 235 MIMCRE 240
>sp|Q74CR5|GLYA_GEOSL Serine hydroxymethyltransferase OS=Geobacter sulfurreducens (strain
ATCC 51573 / DSM 12127 / PCA) GN=glyA PE=3 SV=1
Length = 415
Score = 250 bits (639), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 124/246 (50%), Positives = 167/246 (67%), Gaps = 9/246 (3%)
Query: 27 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGG 86
LE DP++A+ I HE RQ LELI SENF S +V++A GSVMTNKY+EGYPG RYYGG
Sbjct: 4 LETFDPQVAEAIRHETERQEYNLELIASENFVSEAVLEAQGSVMTNKYAEGYPGKRYYGG 63
Query: 87 NEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPH 146
++D+ E+L +RA E F D NVQ SGS +N VY ++LKP D I+ ++L H
Sbjct: 64 CHHVDVVENLAIERAKELFGADH----ANVQPHSGSQANMAVYFSVLKPGDTILGMNLSH 119
Query: 147 GGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY 206
GGHL+HG ++ FF +PY +++ T ID++++E+ A +PK+IV GASAY
Sbjct: 120 GGHLTHG-----SPVNFSGRFFNVVPYGVSQETETIDFNEVERLALEHKPKMIVVGASAY 174
Query: 207 ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGA 266
R D+ R + +K A+++ DMAHI+GLVAAG+ PSP YA+ VTTTTHK+LRGPRG
Sbjct: 175 PRTIDFAAFRIIADKVGAVIMVDMAHIAGLVAAGLHPSPVPYAEFVTTTTHKTLRGPRGG 234
Query: 267 MIFFRK 272
MI R+
Sbjct: 235 MILCRE 240
>sp|A4J9B1|GLYA_DESRM Serine hydroxymethyltransferase OS=Desulfotomaculum reducens
(strain MI-1) GN=glyA PE=3 SV=1
Length = 413
Score = 250 bits (639), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 126/250 (50%), Positives = 169/250 (67%), Gaps = 9/250 (3%)
Query: 23 LNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGAR 82
N L DPE+A IE E RQ + +ELI SENF S +V++A GS++TNKY+EGYPG R
Sbjct: 2 FNGKLAQTDPELAKAIELEHQRQQRNIELIASENFVSPAVLEAQGSILTNKYAEGYPGKR 61
Query: 83 YYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMAL 142
YYGG E++D+AESL RA + F D NVQ SG+ +NF VY ALL+P D+I+ +
Sbjct: 62 YYGGCEFVDIAESLAISRAKKLFGADH----ANVQPHSGAQANFAVYFALLQPGDKILGM 117
Query: 143 DLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 202
+L HGGHL+HG ++ +F + Y + E TG I+Y++L + A +PK+IVAG
Sbjct: 118 NLAHGGHLTHG-----SPVNVSGKYFNVVAYGVEEDTGCINYEKLREIALQEKPKMIVAG 172
Query: 203 ASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRG 262
ASAYAR D+++I ++ + A DMAHI+GLVAAG+ SP YADVVTTTTHK+LRG
Sbjct: 173 ASAYARAIDFKKIGEIAKEIDAYFFVDMAHIAGLVAAGLHQSPVPYADVVTTTTHKTLRG 232
Query: 263 PRGAMIFFRK 272
PRG MI ++
Sbjct: 233 PRGGMILCKE 242
>sp|Q6AM21|GLYA_DESPS Serine hydroxymethyltransferase OS=Desulfotalea psychrophila
(strain LSv54 / DSM 12343) GN=glyA PE=3 SV=1
Length = 425
Score = 249 bits (636), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 123/245 (50%), Positives = 164/245 (66%), Gaps = 10/245 (4%)
Query: 27 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGG 86
L+ DPEI +I+ E+ RQ + LI SEN+ S +V++A GS++TNKYSEGYPG RYY G
Sbjct: 13 LQQQDPEIFSLIQQEEVRQHNKIRLIASENYVSSAVLEATGSILTNKYSEGYPGKRYYEG 72
Query: 87 NEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPH 146
+ ID ES+ RA F + VNVQ SGSP+N VY A LKP D I+ + LPH
Sbjct: 73 QQLIDQIESIAIDRAKAVFGAEH----VNVQPYSGSPANMAVYLAFLKPGDTILGMALPH 128
Query: 147 GGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY 206
GGHL+HG K+S +F + Y LNE G +DY+++ A +PK+++AG SAY
Sbjct: 129 GGHLTHG-----SKVSISGKYFNAVSYALNEE-GILDYEEIRNKALECKPKILIAGHSAY 182
Query: 207 ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGA 266
R+ D+ + R++ ++ A+++ DMAH +GLVA GV PSPF YADVVTTTTHKSLRGPRGA
Sbjct: 183 PRILDFAKFREIADEVGALLMVDMAHFAGLVAGGVHPSPFPYADVVTTTTHKSLRGPRGA 242
Query: 267 MIFFR 271
MI +
Sbjct: 243 MIMCK 247
>sp|B1I6M4|GLYA_DESAP Serine hydroxymethyltransferase OS=Desulforudis audaxviator (strain
MP104C) GN=glyA PE=3 SV=1
Length = 415
Score = 249 bits (635), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 130/246 (52%), Positives = 161/246 (65%), Gaps = 9/246 (3%)
Query: 24 NAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARY 83
N L DPEIA I E RQ LELI SENF S +V++A GSV+TNKY+EGYPGARY
Sbjct: 4 NRSLAETDPEIARAIALEITRQGAKLELIASENFVSRAVLEAQGSVLTNKYAEGYPGARY 63
Query: 84 YGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALD 143
YGG EY+D+ ES+ +RA E F NVQ SG+ +N Y A L+P D IM +
Sbjct: 64 YGGCEYVDIVESVAIRRAKEIF----GAGHANVQPHSGAQANMAAYFAFLEPGDTIMGMR 119
Query: 144 LPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGA 203
L HGGHL+HG KI+ +F +PY + E TG IDYD++ A RPKLIV GA
Sbjct: 120 LAHGGHLTHG-----AKINFSGRYFRYVPYGVEEETGRIDYDRMHAIAREHRPKLIVGGA 174
Query: 204 SAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGP 263
SAY R D+ R+R + + A+++ DMAHI+GL+AAG+ SP YADVVTTTTHK+LRGP
Sbjct: 175 SAYPRELDFARMRAIADDVGALLMIDMAHIAGLIAAGLHMSPVPYADVVTTTTHKTLRGP 234
Query: 264 RGAMIF 269
RG MI
Sbjct: 235 RGGMIL 240
>sp|Q97GV1|GLYA_CLOAB Serine hydroxymethyltransferase OS=Clostridium acetobutylicum
(strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM
B-1787) GN=glyA PE=3 SV=1
Length = 411
Score = 248 bits (633), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 127/254 (50%), Positives = 173/254 (68%), Gaps = 10/254 (3%)
Query: 27 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGG 86
++V D E+ IIE E ARQ +ELI SENFTS +VM+A+GS +TNKY+EGYPG RYYGG
Sbjct: 6 IKVSDSEVYSIIEEENARQENNIELIASENFTSKAVMEAMGSYLTNKYAEGYPGKRYYGG 65
Query: 87 NEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPH 146
+D E L ++RA + F+ + NVQ SGS +N VY A+LKP D IM ++L
Sbjct: 66 CYVVDKVEELARERAKKLFKAEH----ANVQPHSGSQANMAVYFAVLKPGDTIMGMNLTD 121
Query: 147 GGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY 206
GGHL+HG ++ F + Y +++ T IDY+ K A +PK+IV+GASAY
Sbjct: 122 GGHLTHG-----SPVNFSGKLFNIIAYGVSDETEQIDYEAFRKKALECKPKMIVSGASAY 176
Query: 207 ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGA 266
+R+ D+++IR++C++ A M+ DMAHI+GLVAAG+ PSP YAD VTTTTHK+LRGPRG
Sbjct: 177 SRIIDFKKIREICDEVGAYMMVDMAHIAGLVAAGLHPSPIPYADFVTTTTHKTLRGPRGG 236
Query: 267 MIFFR-KGVKEINK 279
IF + K K+I+K
Sbjct: 237 AIFCKEKYAKDIDK 250
>sp|B5E8U0|GLYA_GEOBB Serine hydroxymethyltransferase OS=Geobacter bemidjiensis (strain
Bem / ATCC BAA-1014 / DSM 16622) GN=glyA PE=3 SV=1
Length = 415
Score = 248 bits (632), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 123/246 (50%), Positives = 166/246 (67%), Gaps = 9/246 (3%)
Query: 27 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGG 86
LE DP +A++I E RQ LELI SENF S +V++A GSV+TNKY+EGYPG RYYGG
Sbjct: 4 LETFDPAVAEVIRQETERQEYNLELIASENFVSPAVLEAQGSVLTNKYAEGYPGKRYYGG 63
Query: 87 NEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPH 146
+D+ E+L RA E F D VNVQ SGS +N VY ++LKP D ++ ++L H
Sbjct: 64 CHCVDVVENLAIDRAKELFGADH----VNVQPHSGSQANMAVYFSVLKPGDTVLGMNLAH 119
Query: 147 GGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY 206
GGHL+HG ++ F +PY +++ T IDY++ E+ A +PK+IV GASAY
Sbjct: 120 GGHLTHG-----SPVNFSGKLFNIVPYGVSKETQTIDYEETERLALEHKPKMIVVGASAY 174
Query: 207 ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGA 266
R+ D+E R++ +K A+++ DMAHI+GLVAAG+ PSP YA+ VTTTTHK+LRGPRG
Sbjct: 175 PRIIDFEAFRRIADKVGAVVMVDMAHIAGLVAAGLHPSPVPYAEFVTTTTHKTLRGPRGG 234
Query: 267 MIFFRK 272
MI R+
Sbjct: 235 MIMCRE 240
>sp|Q1D345|GLYA_MYXXD Serine hydroxymethyltransferase OS=Myxococcus xanthus (strain DK
1622) GN=glyA PE=3 SV=1
Length = 418
Score = 248 bits (632), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 129/255 (50%), Positives = 168/255 (65%), Gaps = 10/255 (3%)
Query: 27 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGG 86
L VDPEIA ++ E RQ +GLELI SENF S +VM+AVGSV+TNKY+EGYPG RYYGG
Sbjct: 7 LAEVDPEIARVLREETQRQEEGLELIASENFVSPAVMEAVGSVLTNKYAEGYPGKRYYGG 66
Query: 87 NEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPH 146
E +D+AE+L RA + F D VNVQ+ SGS +N + AL+KP D +++LDL
Sbjct: 67 CEVVDVAENLAIARAKDLFGAD----AVNVQAHSGSQANMGAFMALMKPGDTMLSLDLNS 122
Query: 147 GGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY 206
GGHL+HG + ++ + Y L T ID+ Q+E A +PK+IV GASAY
Sbjct: 123 GGHLTHGATFNFS-----GKLYKVVHYGLTRDTETIDFAQVESLAKEHKPKVIVVGASAY 177
Query: 207 ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGA 266
R D+ + R++ + A ML DMAHI+GLVAAGV PSP AD+VT+TTHK+LRGPRG
Sbjct: 178 PRTLDFAKFREIADAVGAAMLVDMAHIAGLVAAGVHPSPVPVADIVTSTTHKTLRGPRGG 237
Query: 267 MIFFRKG-VKEINKQ 280
++ R+ K IN Q
Sbjct: 238 LVLSREPYAKAINSQ 252
>sp|B1IJJ8|GLYA_CLOBK Serine hydroxymethyltransferase OS=Clostridium botulinum (strain
Okra / Type B1) GN=glyA PE=3 SV=1
Length = 413
Score = 247 bits (631), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 122/246 (49%), Positives = 170/246 (69%), Gaps = 9/246 (3%)
Query: 27 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGG 86
L+ DPE+ D+I+ E+ RQ +ELI SENFTS+SVM+A+GS++TNKY+EGYP RYYGG
Sbjct: 6 LKNTDPELLDMIKKEEERQEYNIELIASENFTSLSVMEAMGSLLTNKYAEGYPHKRYYGG 65
Query: 87 NEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPH 146
E++D E L ++R + F + NVQ SGS +N VY ++L+ D I+ +DL H
Sbjct: 66 CEFVDEVEDLARERLKKLFVAEH----ANVQPHSGSQANMAVYMSVLQTGDTILGMDLSH 121
Query: 147 GGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY 206
GGHL+HG ++ + + Y +++ T IDYDQL+K A RPK+IV+GASAY
Sbjct: 122 GGHLTHG-----SPVNFSGKLYNFISYGVDKETETIDYDQLKKIALENRPKMIVSGASAY 176
Query: 207 ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGA 266
R+ D+E+IR++C++ A M+ DMAHI+GLVA G+ PSP YAD VTTTTHK+LRGPRG
Sbjct: 177 PRIIDFEKIREICDEIDAYMMVDMAHIAGLVATGIHPSPVPYADFVTTTTHKTLRGPRGG 236
Query: 267 MIFFRK 272
I ++
Sbjct: 237 AILCKE 242
>sp|Q8A9S7|GLYA_BACTN Serine hydroxymethyltransferase OS=Bacteroides thetaiotaomicron
(strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 /
VPI-5482) GN=glyA PE=3 SV=1
Length = 426
Score = 247 bits (631), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 122/242 (50%), Positives = 164/242 (67%), Gaps = 9/242 (3%)
Query: 31 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYI 90
D I DIIE E RQ KG+ELI SENF S VMQA+GS +TNKY+EGYPG RYYGG E +
Sbjct: 4 DDLIFDIIEKEHQRQLKGIELIASENFVSDQVMQAMGSCLTNKYAEGYPGKRYYGGCEVV 63
Query: 91 DMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHL 150
D +E + R E F + W NVQ SG+ +N V+ A+L P D+ M L+L HGGHL
Sbjct: 64 DQSEQIAIDRLKEIFGAE---W-ANVQPHSGAQANAAVFLAVLNPGDKFMGLNLAHGGHL 119
Query: 151 SHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLY 210
SHG +T I + Y LN+ TG +DYDQ+E+ A +PK+I+ G SAY+R +
Sbjct: 120 SHGSLVNTS-----GIIYTPCEYNLNQETGRVDYDQMEEVALREKPKMIIGGGSAYSREW 174
Query: 211 DYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFF 270
DY+R+R++ +K AI++ DMAH +GL+AAG++ +P +YA +VT+TTHK+LRGPRG +I
Sbjct: 175 DYKRMREIADKVGAILMIDMAHPAGLIAAGLLENPVKYAHIVTSTTHKTLRGPRGGVIMM 234
Query: 271 RK 272
K
Sbjct: 235 GK 236
>sp|A7GGI2|GLYA_CLOBL Serine hydroxymethyltransferase OS=Clostridium botulinum (strain
Langeland / NCTC 10281 / Type F) GN=glyA PE=3 SV=1
Length = 413
Score = 247 bits (630), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 122/246 (49%), Positives = 170/246 (69%), Gaps = 9/246 (3%)
Query: 27 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGG 86
L+ DPE+ D+I+ E+ RQ +ELI SENFTS+SVM+A+GS++TNKY+EGYP RYYGG
Sbjct: 6 LKNTDPELLDMIKKEEERQEYNIELIASENFTSLSVMEAMGSLLTNKYAEGYPHKRYYGG 65
Query: 87 NEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPH 146
E++D E L ++R + F + NVQ SGS +N VY ++L+ D I+ +DL H
Sbjct: 66 CEFVDEVEDLARERLKKLFAAEH----ANVQPHSGSQANMAVYMSVLQTGDTILGMDLSH 121
Query: 147 GGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY 206
GGHL+HG ++ + + Y +++ T IDYDQL+K A RPK+IV+GASAY
Sbjct: 122 GGHLTHG-----SPVNFSGKLYNFISYGVDKETETIDYDQLKKIALENRPKMIVSGASAY 176
Query: 207 ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGA 266
R+ D+E+IR++C++ A M+ DMAHI+GLVA G+ PSP YAD VTTTTHK+LRGPRG
Sbjct: 177 PRIIDFEKIREICDEIDAYMMVDMAHIAGLVATGLHPSPVPYADFVTTTTHKTLRGPRGG 236
Query: 267 MIFFRK 272
I ++
Sbjct: 237 AILCKE 242
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 111,549,002
Number of Sequences: 539616
Number of extensions: 4570002
Number of successful extensions: 12894
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 825
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 10416
Number of HSP's gapped (non-prelim): 868
length of query: 295
length of database: 191,569,459
effective HSP length: 117
effective length of query: 178
effective length of database: 128,434,387
effective search space: 22861320886
effective search space used: 22861320886
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)