Query 022564
Match_columns 295
No_of_seqs 262 out of 2662
Neff 9.2
Searched_HMMs 46136
Date Fri Mar 29 04:30:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022564.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/022564hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0112 GlyA Glycine/serine hy 100.0 1.4E-44 2.9E-49 314.4 22.0 239 25-272 5-243 (413)
2 KOG2467 Glycine/serine hydroxy 100.0 1.2E-44 2.7E-49 310.0 20.5 272 17-288 11-283 (477)
3 PF00464 SHMT: Serine hydroxym 100.0 2.7E-44 5.9E-49 322.7 19.0 259 27-285 1-259 (399)
4 PLN02271 serine hydroxymethylt 100.0 5.5E-43 1.2E-47 321.8 25.7 253 24-276 126-379 (586)
5 PLN03226 serine hydroxymethylt 100.0 7.5E-39 1.6E-43 297.8 25.2 263 13-275 1-263 (475)
6 PRK13580 serine hydroxymethylt 100.0 2.1E-38 4.5E-43 290.6 23.8 252 25-286 28-314 (493)
7 PTZ00094 serine hydroxymethylt 100.0 1.4E-36 3E-41 283.1 25.8 251 24-275 12-262 (452)
8 PRK13034 serine hydroxymethylt 100.0 1.5E-31 3.2E-36 246.6 25.3 244 22-274 4-247 (416)
9 cd00378 SHMT Serine-glycine hy 100.0 2.7E-31 5.8E-36 244.6 25.7 242 29-277 2-244 (402)
10 PRK00011 glyA serine hydroxyme 100.0 3.1E-31 6.8E-36 245.2 25.9 244 25-277 4-248 (416)
11 COG0520 csdA Selenocysteine ly 100.0 1.9E-30 4.1E-35 236.6 18.4 222 49-290 24-254 (405)
12 COG1104 NifS Cysteine sulfinat 100.0 4.6E-28 9.9E-33 214.4 15.9 201 55-275 10-220 (386)
13 KOG1549 Cysteine desulfurase N 99.9 2.4E-26 5.1E-31 204.3 16.1 205 47-272 43-257 (428)
14 PF00266 Aminotran_5: Aminotra 99.9 2.8E-25 6.2E-30 202.5 17.4 210 52-278 5-221 (371)
15 PLN02651 cysteine desulfurase 99.9 3E-25 6.5E-30 201.8 17.5 205 53-276 6-218 (364)
16 PRK10874 cysteine sulfinate de 99.9 1.1E-24 2.4E-29 200.6 18.0 211 48-276 20-240 (401)
17 COG0436 Aspartate/tyrosine/aro 99.9 2.6E-24 5.7E-29 196.4 19.9 210 47-276 29-257 (393)
18 KOG0257 Kynurenine aminotransf 99.9 1.8E-24 3.8E-29 190.1 18.0 232 24-274 9-263 (420)
19 PRK09295 bifunctional cysteine 99.9 1.5E-24 3.3E-29 200.0 17.3 211 48-276 24-244 (406)
20 TIGR03392 FeS_syn_CsdA cystein 99.9 3E-24 6.5E-29 197.5 17.6 211 48-276 17-237 (398)
21 TIGR01977 am_tr_V_EF2568 cyste 99.9 6.5E-24 1.4E-28 193.7 19.0 202 57-274 11-216 (376)
22 TIGR03235 DNA_S_dndA cysteine 99.9 6.9E-24 1.5E-28 192.1 17.5 204 53-275 5-217 (353)
23 TIGR03402 FeS_nifS cysteine de 99.9 1.2E-23 2.5E-28 192.3 17.5 202 53-274 6-214 (379)
24 TIGR02006 IscS cysteine desulf 99.9 1.2E-23 2.6E-28 193.7 17.3 208 49-275 5-221 (402)
25 PLN02855 Bifunctional selenocy 99.9 2.2E-23 4.7E-28 193.4 18.6 210 48-276 33-253 (424)
26 TIGR01979 sufS cysteine desulf 99.9 2.2E-23 4.9E-28 192.0 18.3 211 48-276 19-239 (403)
27 cd06453 SufS_like Cysteine des 99.9 3.8E-23 8.2E-28 188.5 18.1 208 53-277 6-220 (373)
28 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 2.9E-23 6.4E-28 190.2 17.2 209 47-277 19-240 (387)
29 TIGR01976 am_tr_V_VC1184 cyste 99.9 3.4E-23 7.5E-28 190.4 17.2 210 49-276 19-235 (397)
30 cd06451 AGAT_like Alanine-glyo 99.9 5.3E-23 1.1E-27 186.4 18.1 204 49-279 1-208 (356)
31 PRK02948 cysteine desulfurase; 99.9 5.3E-23 1.1E-27 188.2 17.9 202 53-274 7-216 (381)
32 PLN02409 serine--glyoxylate am 99.9 6.9E-23 1.5E-27 188.5 18.3 204 49-279 11-223 (401)
33 PRK14012 cysteine desulfurase; 99.9 6.8E-23 1.5E-27 188.9 17.6 203 53-274 10-222 (404)
34 TIGR03403 nifS_epsilon cystein 99.9 2.1E-22 4.6E-27 184.3 18.1 202 53-274 6-218 (382)
35 PRK02769 histidine decarboxyla 99.9 1.1E-21 2.4E-26 178.3 20.8 201 60-276 36-250 (380)
36 PLN03032 serine decarboxylase; 99.9 5.4E-21 1.2E-25 172.8 21.6 202 59-276 36-253 (374)
37 TIGR01814 kynureninase kynuren 99.9 7.1E-22 1.5E-26 182.2 15.9 212 47-274 27-249 (406)
38 cd06452 SepCysS Sep-tRNA:Cys-t 99.9 2.3E-21 5.1E-26 176.1 17.9 202 54-278 9-222 (361)
39 TIGR02326 transamin_PhnW 2-ami 99.9 3.8E-21 8.1E-26 174.8 18.5 200 49-276 5-210 (363)
40 COG0399 WecE Predicted pyridox 99.9 4.3E-21 9.2E-26 171.4 17.9 190 54-273 9-199 (374)
41 PRK06108 aspartate aminotransf 99.9 8.7E-21 1.9E-25 173.5 19.0 229 29-277 7-253 (382)
42 TIGR01437 selA_rel uncharacter 99.9 8.7E-21 1.9E-25 172.2 18.2 189 54-277 21-228 (363)
43 PRK13238 tnaA tryptophanase/L- 99.9 6.1E-21 1.3E-25 177.6 16.8 219 28-272 14-274 (460)
44 PLN00175 aminotransferase fami 99.9 2.4E-20 5.2E-25 172.3 19.4 232 24-277 33-280 (413)
45 PRK13479 2-aminoethylphosphona 99.9 3.2E-20 6.8E-25 169.1 19.8 202 50-278 8-214 (368)
46 PRK12414 putative aminotransfe 99.9 2.8E-20 6.1E-25 170.4 19.2 230 26-277 10-256 (384)
47 TIGR01788 Glu-decarb-GAD gluta 99.9 2.3E-20 4.9E-25 172.0 18.4 198 56-273 51-277 (431)
48 cd00615 Orn_deC_like Ornithine 99.9 3E-21 6.4E-26 170.6 11.9 167 94-273 61-236 (294)
49 COG0075 Serine-pyruvate aminot 99.9 2.9E-20 6.2E-25 166.0 17.9 208 49-284 7-220 (383)
50 TIGR01822 2am3keto_CoA 2-amino 99.9 2.8E-20 6E-25 170.9 18.4 209 46-279 38-261 (393)
51 COG1168 MalY Bifunctional PLP- 99.9 2.8E-20 6.1E-25 162.3 17.2 197 57-273 38-249 (388)
52 TIGR02539 SepCysS Sep-tRNA:Cys 99.9 1.4E-20 3E-25 171.6 16.0 209 46-278 6-229 (370)
53 PRK08960 hypothetical protein; 99.9 8.3E-20 1.8E-24 167.5 20.3 229 25-276 7-254 (387)
54 PRK13355 bifunctional HTH-doma 99.8 4.5E-20 9.8E-25 175.1 19.0 225 23-271 119-368 (517)
55 cd00613 GDC-P Glycine cleavage 99.8 5.6E-20 1.2E-24 169.0 18.8 175 88-277 60-245 (398)
56 PRK07366 succinyldiaminopimela 99.8 9.1E-20 2E-24 167.2 19.8 233 25-277 5-260 (388)
57 PRK06348 aspartate aminotransf 99.8 9E-20 2E-24 167.0 19.4 234 21-276 4-254 (384)
58 PRK05957 aspartate aminotransf 99.8 1.1E-19 2.4E-24 166.8 19.8 231 25-277 6-254 (389)
59 PRK08361 aspartate aminotransf 99.8 8E-20 1.7E-24 167.8 18.5 229 27-277 14-258 (391)
60 PRK09147 succinyldiaminopimela 99.8 1.2E-19 2.5E-24 167.0 19.6 229 27-277 5-266 (396)
61 PRK08912 hypothetical protein; 99.8 1E-19 2.2E-24 166.8 19.1 236 21-278 2-254 (387)
62 PRK09276 LL-diaminopimelate am 99.8 1.6E-19 3.5E-24 165.4 20.3 233 25-277 6-260 (385)
63 PLN02724 Molybdenum cofactor s 99.8 3.3E-20 7.1E-25 183.7 16.6 217 47-276 34-281 (805)
64 PRK11658 UDP-4-amino-4-deoxy-L 99.8 1.2E-19 2.5E-24 165.9 18.5 187 55-272 9-196 (379)
65 PRK06225 aspartate aminotransf 99.8 1.1E-19 2.5E-24 166.1 18.6 226 28-277 7-246 (380)
66 PRK07681 aspartate aminotransf 99.8 1.9E-19 4.1E-24 165.7 20.1 232 25-277 7-260 (399)
67 TIGR03301 PhnW-AepZ 2-aminoeth 99.8 1.2E-19 2.6E-24 164.1 18.4 201 51-278 3-208 (355)
68 TIGR03588 PseC UDP-4-keto-6-de 99.8 1E-19 2.3E-24 166.4 18.1 186 58-273 8-200 (380)
69 TIGR03540 DapC_direct LL-diami 99.8 3.3E-19 7.2E-24 163.2 21.1 212 46-277 29-258 (383)
70 PRK05942 aspartate aminotransf 99.8 2.3E-19 5.1E-24 164.8 20.2 232 26-278 11-265 (394)
71 PLN02368 alanine transaminase 99.8 2.5E-19 5.5E-24 164.6 20.0 179 84-276 103-315 (407)
72 PF01041 DegT_DnrJ_EryC1: DegT 99.8 7.1E-20 1.5E-24 166.4 15.6 184 59-273 4-190 (363)
73 PRK07550 hypothetical protein; 99.8 3.2E-19 6.9E-24 163.5 19.9 208 47-276 30-256 (386)
74 PRK06207 aspartate aminotransf 99.8 2.2E-19 4.7E-24 165.6 18.8 212 47-277 40-272 (405)
75 PRK06290 aspartate aminotransf 99.8 6.4E-19 1.4E-23 162.5 21.7 227 30-277 22-272 (410)
76 PRK07777 aminotransferase; Val 99.8 3.7E-19 8E-24 163.2 19.7 231 25-277 4-253 (387)
77 PRK08068 transaminase; Reviewe 99.8 4.5E-19 9.7E-24 162.7 20.3 231 27-278 9-262 (389)
78 PRK07337 aminotransferase; Val 99.8 2.6E-19 5.6E-24 164.2 18.6 228 26-276 6-252 (388)
79 PRK07309 aromatic amino acid a 99.8 2.6E-19 5.5E-24 164.4 18.2 239 19-278 3-259 (391)
80 PRK13520 L-tyrosine decarboxyl 99.8 3.8E-19 8.1E-24 162.0 18.6 200 51-273 25-236 (371)
81 PRK04366 glycine dehydrogenase 99.8 2.1E-19 4.5E-24 168.7 17.1 199 57-277 81-296 (481)
82 PRK09082 methionine aminotrans 99.8 2.2E-19 4.8E-24 164.6 16.9 233 25-277 10-257 (386)
83 PRK07682 hypothetical protein; 99.8 4E-19 8.6E-24 162.4 18.3 212 46-278 20-248 (378)
84 PTZ00377 alanine aminotransfer 99.8 3.8E-19 8.2E-24 167.4 18.3 200 59-276 90-323 (481)
85 TIGR03538 DapC_gpp succinyldia 99.8 8.2E-19 1.8E-23 161.2 19.9 227 28-276 5-264 (393)
86 TIGR00474 selA seryl-tRNA(sec) 99.8 5.5E-19 1.2E-23 163.5 17.4 199 53-276 88-306 (454)
87 cd01494 AAT_I Aspartate aminot 99.8 6.6E-19 1.4E-23 142.0 15.7 163 96-271 4-170 (170)
88 PLN02231 alanine transaminase 99.8 1E-18 2.3E-23 165.4 19.3 236 17-270 95-366 (534)
89 PLN00145 tyrosine/nicotianamin 99.8 2.4E-18 5.3E-23 159.6 21.1 204 47-271 53-277 (430)
90 PRK07324 transaminase; Validat 99.8 4.4E-19 9.5E-24 161.9 15.4 206 47-280 27-246 (373)
91 TIGR03537 DapC succinyldiamino 99.8 1.6E-18 3.4E-23 157.0 18.8 205 49-276 3-226 (350)
92 PLN02187 rooty/superroot1 99.8 1.2E-18 2.6E-23 162.9 18.5 205 46-271 66-291 (462)
93 PRK06939 2-amino-3-ketobutyrat 99.8 5.3E-19 1.2E-23 162.4 15.9 207 47-278 43-264 (397)
94 PRK07683 aminotransferase A; V 99.8 2.1E-18 4.6E-23 158.1 19.6 232 25-277 7-254 (387)
95 PRK05764 aspartate aminotransf 99.8 1.9E-18 4.2E-23 158.7 19.4 232 24-277 5-259 (393)
96 cd06454 KBL_like KBL_like; thi 99.8 8.1E-19 1.8E-23 158.4 16.2 193 59-277 17-220 (349)
97 PTZ00433 tyrosine aminotransfe 99.8 1.5E-18 3.3E-23 160.3 18.2 203 46-270 33-263 (412)
98 PLN02721 threonine aldolase 99.8 7.2E-19 1.6E-23 159.0 15.7 204 48-276 7-226 (353)
99 PRK08363 alanine aminotransfer 99.8 2.2E-18 4.8E-23 158.6 19.2 203 47-270 31-251 (398)
100 PRK04311 selenocysteine syntha 99.8 1.2E-18 2.5E-23 161.7 17.3 203 53-277 93-312 (464)
101 cd06450 DOPA_deC_like DOPA dec 99.8 1.5E-19 3.3E-24 163.0 10.9 174 84-271 30-230 (345)
102 PLN02656 tyrosine transaminase 99.8 2.4E-18 5.2E-23 158.8 18.6 204 46-271 31-256 (409)
103 KOG0259 Tyrosine aminotransfer 99.8 2.2E-18 4.8E-23 149.8 17.0 206 47-273 62-288 (447)
104 PRK06107 aspartate aminotransf 99.8 2.7E-18 6E-23 158.2 18.8 210 46-277 33-262 (402)
105 cd06502 TA_like Low-specificit 99.8 7.6E-19 1.6E-23 158.0 14.8 193 58-276 10-214 (338)
106 PRK08636 aspartate aminotransf 99.8 5.3E-18 1.2E-22 156.3 20.5 233 27-277 10-269 (403)
107 PRK15407 lipopolysaccharide bi 99.8 3.7E-18 8E-23 158.3 19.2 212 31-274 8-237 (438)
108 PLN00143 tyrosine/nicotianamin 99.8 3.7E-18 8E-23 157.6 18.8 205 46-271 32-257 (409)
109 cd00616 AHBA_syn 3-amino-5-hyd 99.8 2.5E-18 5.4E-23 155.5 16.5 160 97-275 23-186 (352)
110 PLN02414 glycine dehydrogenase 99.8 1.6E-18 3.5E-23 171.6 16.2 169 88-276 564-753 (993)
111 PRK09265 aminotransferase AlaT 99.8 9.1E-18 2E-22 154.8 20.0 202 47-271 34-255 (404)
112 PRK09148 aminotransferase; Val 99.8 1.1E-17 2.3E-22 154.3 20.5 230 28-277 8-259 (405)
113 TIGR03812 tyr_de_CO2_Arch tyro 99.8 6.3E-18 1.4E-22 154.1 18.7 196 58-276 32-245 (373)
114 PRK06855 aminotransferase; Val 99.8 1.6E-17 3.5E-22 154.4 20.4 204 47-271 33-258 (433)
115 PRK14807 histidinol-phosphate 99.8 6.3E-18 1.4E-22 153.1 16.8 203 48-278 24-235 (351)
116 PLN02376 1-aminocyclopropane-1 99.8 4.7E-18 1E-22 159.9 16.6 213 47-273 47-296 (496)
117 PRK03317 histidinol-phosphate 99.8 2.9E-18 6.2E-23 156.2 14.7 211 48-278 28-250 (368)
118 TIGR02379 ECA_wecE TDP-4-keto- 99.8 1.6E-17 3.4E-22 151.5 19.4 184 57-272 8-196 (376)
119 TIGR01329 cysta_beta_ly_E cyst 99.8 2E-18 4.3E-23 157.5 13.5 155 96-273 51-210 (378)
120 COG0156 BioF 7-keto-8-aminopel 99.8 1E-17 2.2E-22 150.9 17.4 214 47-287 40-271 (388)
121 PRK07179 hypothetical protein; 99.8 7.3E-18 1.6E-22 155.6 17.0 193 59-278 70-270 (407)
122 TIGR00858 bioF 8-amino-7-oxono 99.8 1.1E-17 2.4E-22 151.5 17.8 204 47-277 17-235 (360)
123 PRK08776 cystathionine gamma-s 99.8 3.4E-18 7.4E-23 157.0 14.2 155 96-273 64-224 (405)
124 PRK08861 cystathionine gamma-s 99.8 4.4E-18 9.6E-23 155.2 14.8 153 97-273 58-217 (388)
125 PRK08134 O-acetylhomoserine am 99.8 4.9E-18 1.1E-22 157.0 15.3 146 97-264 69-216 (433)
126 PRK07811 cystathionine gamma-s 99.8 4.6E-18 1E-22 155.6 15.0 154 97-273 66-225 (388)
127 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.8 1.9E-17 4E-22 151.2 18.8 184 58-273 9-196 (375)
128 PLN02450 1-aminocyclopropane-1 99.8 1.2E-17 2.5E-22 156.5 17.5 213 47-273 39-289 (468)
129 PRK07504 O-succinylhomoserine 99.8 4E-18 8.7E-23 156.5 13.9 157 97-275 70-231 (398)
130 cd00617 Tnase_like Tryptophana 99.8 1.1E-17 2.4E-22 153.9 16.7 204 47-276 12-254 (431)
131 TIGR03576 pyridox_MJ0158 pyrid 99.8 8.2E-18 1.8E-22 151.6 15.5 185 59-279 35-225 (346)
132 PRK08574 cystathionine gamma-s 99.8 7.3E-18 1.6E-22 154.0 15.0 161 88-275 53-219 (385)
133 PRK07810 O-succinylhomoserine 99.8 5.8E-18 1.3E-22 155.5 14.5 157 97-275 75-236 (403)
134 TIGR01141 hisC histidinol-phos 99.8 3.8E-18 8.3E-23 154.1 13.1 201 47-278 20-232 (346)
135 TIGR01264 tyr_amTase_E tyrosin 99.8 2.3E-17 5E-22 152.0 18.4 205 47-272 32-256 (401)
136 PRK05958 8-amino-7-oxononanoat 99.8 1.8E-17 3.9E-22 151.6 17.6 206 46-277 39-257 (385)
137 PLN02483 serine palmitoyltrans 99.8 8.3E-18 1.8E-22 158.1 15.5 193 60-279 118-331 (489)
138 TIGR01328 met_gam_lyase methio 99.8 6.6E-18 1.4E-22 154.7 14.4 158 97-276 64-226 (391)
139 PRK08064 cystathionine beta-ly 99.8 6.4E-18 1.4E-22 154.8 14.2 153 97-272 59-216 (390)
140 PRK08133 O-succinylhomoserine 99.8 7.4E-18 1.6E-22 154.4 14.7 157 96-275 65-227 (390)
141 PRK06767 methionine gamma-lyas 99.8 6.6E-18 1.4E-22 154.6 14.3 158 97-276 66-228 (386)
142 TIGR01324 cysta_beta_ly_B cyst 99.8 5.7E-18 1.2E-22 154.2 13.8 165 86-276 48-217 (377)
143 PRK06234 methionine gamma-lyas 99.8 7.2E-18 1.6E-22 154.9 14.6 164 88-277 64-234 (400)
144 PRK05613 O-acetylhomoserine am 99.8 6.2E-18 1.3E-22 156.3 14.1 157 96-273 73-234 (437)
145 PLN02822 serine palmitoyltrans 99.8 2.3E-17 5E-22 154.8 18.2 207 46-279 109-336 (481)
146 PRK01533 histidinol-phosphate 99.8 3E-18 6.5E-23 155.9 11.7 200 47-278 30-244 (366)
147 TIGR01825 gly_Cac_T_rel pyrido 99.8 1.7E-17 3.7E-22 151.9 16.8 207 46-278 33-252 (385)
148 PRK03158 histidinol-phosphate 99.8 7.9E-18 1.7E-22 152.8 14.4 201 47-278 30-244 (359)
149 TIGR01265 tyr_nico_aTase tyros 99.8 7.6E-17 1.6E-21 148.7 20.9 207 46-272 31-257 (403)
150 PRK07503 methionine gamma-lyas 99.8 8.2E-18 1.8E-22 154.7 14.3 158 97-276 70-232 (403)
151 PLN03026 histidinol-phosphate 99.8 1.3E-17 2.8E-22 152.5 15.3 200 47-277 53-261 (380)
152 PRK05939 hypothetical protein; 99.8 1.2E-17 2.7E-22 153.0 14.9 158 86-270 45-206 (397)
153 PF01276 OKR_DC_1: Orn/Lys/Arg 99.8 2E-18 4.3E-23 156.5 9.3 166 95-274 69-257 (417)
154 PRK06836 aspartate aminotransf 99.8 5E-17 1.1E-21 149.4 18.8 209 47-274 34-262 (394)
155 PRK03080 phosphoserine aminotr 99.8 4.2E-18 9.1E-23 155.6 11.4 194 48-277 13-214 (378)
156 PRK08249 cystathionine gamma-s 99.8 9.6E-18 2.1E-22 153.8 13.7 158 97-276 69-231 (398)
157 PLN02263 serine decarboxylase 99.8 6E-17 1.3E-21 149.0 18.8 172 89-274 130-318 (470)
158 PRK09275 aspartate aminotransf 99.8 1.4E-17 3E-22 156.2 14.9 204 47-273 101-328 (527)
159 PRK08114 cystathionine beta-ly 99.8 1.3E-17 2.8E-22 151.8 14.2 163 86-274 60-229 (395)
160 PRK09028 cystathionine beta-ly 99.8 1.2E-17 2.5E-22 152.4 13.8 155 97-274 66-226 (394)
161 PRK06176 cystathionine gamma-s 99.7 1.4E-17 3.1E-22 151.8 13.5 154 97-273 55-213 (380)
162 PRK05387 histidinol-phosphate 99.7 1.9E-17 4.1E-22 149.9 14.1 196 47-277 25-231 (353)
163 COG1103 Archaea-specific pyrid 99.7 5.2E-17 1.1E-21 135.5 15.4 208 46-277 15-238 (382)
164 PRK10534 L-threonine aldolase; 99.7 1.5E-17 3.2E-22 149.4 13.3 204 49-277 2-216 (333)
165 PRK07568 aspartate aminotransf 99.7 1.5E-16 3.4E-21 146.2 20.3 206 47-276 31-256 (397)
166 TIGR03799 NOD_PanD_pyr putativ 99.7 2.2E-17 4.7E-22 155.4 14.8 177 86-273 123-349 (522)
167 PLN03227 serine palmitoyltrans 99.7 5.5E-17 1.2E-21 148.8 16.8 196 58-277 13-228 (392)
168 TIGR01325 O_suc_HS_sulf O-succ 99.7 1.5E-17 3.2E-22 152.0 12.8 157 97-276 59-221 (380)
169 cd00614 CGS_like CGS_like: Cys 99.7 2.6E-17 5.6E-22 149.9 14.3 157 97-276 45-208 (369)
170 PRK04870 histidinol-phosphate 99.7 3.3E-17 7.1E-22 148.6 14.7 203 47-277 27-238 (356)
171 PRK09105 putative aminotransfe 99.7 3.5E-17 7.7E-22 149.1 14.8 199 47-277 44-254 (370)
172 PRK08248 O-acetylhomoserine am 99.7 4.4E-17 9.5E-22 150.7 15.4 154 97-272 69-227 (431)
173 PRK06702 O-acetylhomoserine am 99.7 4.3E-17 9.3E-22 150.0 15.2 160 88-273 61-226 (432)
174 PRK08175 aminotransferase; Val 99.7 2.2E-16 4.8E-21 145.2 19.9 212 46-278 29-259 (395)
175 PRK07671 cystathionine beta-ly 99.7 4.2E-17 9.2E-22 148.7 14.9 154 96-273 54-213 (377)
176 PRK07590 L,L-diaminopimelate a 99.7 1.5E-16 3.3E-21 146.9 18.8 207 47-276 35-269 (409)
177 PRK00451 glycine dehydrogenase 99.7 6.1E-17 1.3E-21 151.2 16.2 169 91-277 111-289 (447)
178 PRK02610 histidinol-phosphate 99.7 3.4E-17 7.4E-22 149.5 14.1 209 47-278 29-256 (374)
179 TIGR03531 selenium_SpcS O-phos 99.7 1.2E-16 2.6E-21 147.0 17.6 175 88-273 101-289 (444)
180 PRK00950 histidinol-phosphate 99.7 1.9E-17 4.2E-22 150.3 12.2 199 47-276 35-243 (361)
181 PRK06460 hypothetical protein; 99.7 2.7E-17 5.9E-22 149.9 13.1 158 97-276 50-212 (376)
182 PLN02509 cystathionine beta-ly 99.7 2.9E-17 6.2E-22 152.5 13.4 157 94-273 135-296 (464)
183 PLN02880 tyrosine decarboxylas 99.7 9.5E-17 2.1E-21 150.6 16.9 177 87-273 117-323 (490)
184 PRK05994 O-acetylhomoserine am 99.7 6.6E-17 1.4E-21 149.6 15.6 150 97-269 68-223 (427)
185 KOG2862 Alanine-glyoxylate ami 99.7 1.6E-16 3.5E-21 134.9 16.4 206 50-283 20-231 (385)
186 PRK05839 hypothetical protein; 99.7 2.4E-16 5.1E-21 144.0 18.8 204 47-277 25-253 (374)
187 PLN02607 1-aminocyclopropane-1 99.7 1.5E-16 3.2E-21 148.1 17.7 214 47-274 48-298 (447)
188 PRK07812 O-acetylhomoserine am 99.7 7.4E-17 1.6E-21 149.1 15.3 153 97-270 74-230 (436)
189 PRK09257 aromatic amino acid a 99.7 2.1E-16 4.6E-21 145.4 18.2 223 28-270 6-260 (396)
190 PRK07865 N-succinyldiaminopime 99.7 2E-16 4.2E-21 144.0 17.7 218 23-276 3-243 (364)
191 PRK08045 cystathionine gamma-s 99.7 4.3E-17 9.3E-22 148.9 13.4 152 97-272 57-215 (386)
192 PRK14809 histidinol-phosphate 99.7 1.2E-16 2.6E-21 145.0 16.1 202 47-278 31-244 (357)
193 PRK05968 hypothetical protein; 99.7 4.9E-17 1.1E-21 148.9 13.7 157 97-276 68-229 (389)
194 TIGR03801 asp_4_decarbox aspar 99.7 8.9E-17 1.9E-21 150.6 15.5 206 47-273 95-327 (521)
195 PRK08153 histidinol-phosphate 99.7 9.4E-17 2E-21 146.3 15.3 199 48-277 34-244 (369)
196 cd00611 PSAT_like Phosphoserin 99.7 1.9E-17 4E-22 150.1 10.6 199 49-277 1-212 (355)
197 COG0076 GadB Glutamate decarbo 99.7 1.5E-16 3.2E-21 147.4 16.5 199 54-273 70-292 (460)
198 PLN02242 methionine gamma-lyas 99.7 4.1E-17 8.9E-22 150.4 12.7 165 88-277 76-245 (418)
199 TIGR01326 OAH_OAS_sulfhy OAH/O 99.7 8.4E-17 1.8E-21 148.7 14.8 153 97-272 62-219 (418)
200 PRK02731 histidinol-phosphate 99.7 1.6E-16 3.4E-21 144.7 16.3 201 46-277 32-246 (367)
201 PRK07050 cystathionine beta-ly 99.7 1E-16 2.2E-21 146.9 15.0 153 97-272 70-228 (394)
202 PRK08056 threonine-phosphate d 99.7 1.8E-16 3.9E-21 143.8 16.3 191 47-272 21-228 (356)
203 PRK03321 putative aminotransfe 99.7 5.9E-17 1.3E-21 146.7 13.0 201 47-277 23-237 (352)
204 PRK15481 transcriptional regul 99.7 1.9E-16 4.2E-21 147.2 16.6 204 48-278 87-303 (431)
205 TIGR02080 O_succ_thio_ly O-suc 99.7 1E-16 2.2E-21 146.4 14.2 153 97-273 56-215 (382)
206 PLN02590 probable tyrosine dec 99.7 3.4E-16 7.5E-21 147.3 17.9 180 85-274 163-372 (539)
207 PRK05967 cystathionine beta-ly 99.7 6.5E-17 1.4E-21 147.3 12.6 155 97-274 69-229 (395)
208 PTZ00376 aspartate aminotransf 99.7 2.2E-16 4.7E-21 145.6 16.0 208 46-269 29-264 (404)
209 PRK07269 cystathionine gamma-s 99.7 1.1E-16 2.3E-21 145.2 13.5 156 88-273 54-215 (364)
210 PRK06084 O-acetylhomoserine am 99.7 2E-16 4.3E-21 146.2 15.5 154 97-273 63-222 (425)
211 PRK08247 cystathionine gamma-s 99.7 1.5E-16 3.3E-21 144.7 14.1 152 97-272 57-214 (366)
212 PLN02672 methionine S-methyltr 99.7 4.1E-16 8.9E-21 155.2 17.8 208 47-276 698-931 (1082)
213 TIGR00461 gcvP glycine dehydro 99.7 2.5E-16 5.5E-21 154.6 15.9 171 88-275 526-714 (939)
214 COG0079 HisC Histidinol-phosph 99.7 5.1E-16 1.1E-20 139.8 16.1 200 47-278 23-234 (356)
215 TIGR03539 DapC_actino succinyl 99.7 4.9E-16 1.1E-20 141.0 16.0 195 46-276 21-237 (357)
216 PRK05166 histidinol-phosphate 99.7 3.3E-16 7.1E-21 142.9 14.4 200 47-276 37-252 (371)
217 COG3844 Kynureninase [Amino ac 99.7 3.7E-16 8E-21 133.6 13.6 212 46-277 30-249 (407)
218 PF00282 Pyridoxal_deC: Pyrido 99.7 1.2E-15 2.6E-20 138.7 17.9 179 85-274 72-279 (373)
219 PRK05355 3-phosphoserine/phosp 99.7 2.8E-16 6.1E-21 142.4 13.0 203 49-278 5-216 (360)
220 TIGR03542 DAPAT_plant LL-diami 99.7 1.8E-15 3.9E-20 139.5 18.5 204 47-275 34-265 (402)
221 cd00609 AAT_like Aspartate ami 99.7 1.9E-15 4E-20 135.9 18.2 208 50-277 2-226 (350)
222 PRK15029 arginine decarboxylas 99.7 3.4E-16 7.3E-21 151.5 14.0 166 94-273 207-402 (755)
223 PF00155 Aminotran_1_2: Aminot 99.7 7.2E-16 1.6E-20 140.0 14.3 213 47-277 2-242 (363)
224 PRK03967 histidinol-phosphate 99.7 1.1E-15 2.3E-20 137.7 14.9 200 47-278 19-226 (337)
225 PF01212 Beta_elim_lyase: Beta 99.7 1.2E-16 2.5E-21 140.1 8.3 195 54-275 4-212 (290)
226 PRK12566 glycine dehydrogenase 99.7 5.8E-16 1.3E-20 151.3 13.9 167 88-272 539-719 (954)
227 TIGR02618 tyr_phenol_ly tyrosi 99.7 3.3E-16 7.3E-21 142.6 11.3 186 84-289 67-284 (450)
228 PRK05937 8-amino-7-oxononanoat 99.7 1.8E-15 3.9E-20 137.9 16.2 193 58-273 19-226 (370)
229 PRK01688 histidinol-phosphate 99.7 2.1E-16 4.5E-21 143.1 9.7 164 97-277 62-234 (351)
230 PRK13392 5-aminolevulinate syn 99.7 1.4E-15 2.9E-20 140.6 14.2 193 58-277 61-266 (410)
231 PF01053 Cys_Met_Meta_PP: Cys/ 99.7 8.7E-16 1.9E-20 139.6 12.7 159 87-272 54-219 (386)
232 PRK09064 5-aminolevulinate syn 99.7 3.3E-15 7.3E-20 137.9 16.5 204 47-277 47-266 (407)
233 PRK06358 threonine-phosphate d 99.7 2.7E-15 5.9E-20 136.0 15.4 196 48-275 21-233 (354)
234 PRK09440 avtA valine--pyruvate 99.7 3.4E-15 7.3E-20 138.2 16.1 217 46-276 30-268 (416)
235 COG1167 ARO8 Transcriptional r 99.7 1.9E-15 4.1E-20 141.1 14.3 179 83-278 127-320 (459)
236 PRK05367 glycine dehydrogenase 99.7 1.2E-15 2.7E-20 151.8 13.7 171 88-275 538-726 (954)
237 PRK13237 tyrosine phenol-lyase 99.6 3.3E-15 7.2E-20 136.5 14.9 187 84-290 74-292 (460)
238 PRK04635 histidinol-phosphate 99.6 5.2E-16 1.1E-20 140.7 9.2 163 97-277 65-235 (354)
239 COG2873 MET17 O-acetylhomoseri 99.6 2.7E-15 5.9E-20 130.6 12.9 162 88-276 62-229 (426)
240 PRK07582 cystathionine gamma-l 99.6 2.3E-15 4.9E-20 136.9 13.1 154 89-272 52-210 (366)
241 TIGR01364 serC_1 phosphoserine 99.6 3.5E-15 7.7E-20 134.7 13.8 196 58-280 3-207 (349)
242 COG1003 GcvP Glycine cleavage 99.6 5.2E-15 1.1E-19 131.1 14.1 171 88-276 105-291 (496)
243 PRK07908 hypothetical protein; 99.6 1.1E-14 2.5E-19 131.7 16.7 195 46-277 22-225 (349)
244 PLN02397 aspartate transaminas 99.6 6.4E-15 1.4E-19 136.6 15.2 237 20-269 21-282 (423)
245 TIGR01821 5aminolev_synth 5-am 99.6 7.7E-15 1.7E-19 135.3 15.4 194 58-278 60-266 (402)
246 COG0626 MetC Cystathionine bet 99.6 9.1E-15 2E-19 131.7 14.8 161 87-273 62-228 (396)
247 PRK08354 putative aminotransfe 99.6 1.9E-14 4.1E-19 128.2 16.4 179 47-270 9-196 (311)
248 PRK07049 methionine gamma-lyas 99.6 1E-14 2.2E-19 135.1 15.0 159 97-276 88-262 (427)
249 PLN02955 8-amino-7-oxononanoat 99.6 2.5E-14 5.4E-19 132.0 17.1 196 58-278 117-338 (476)
250 PRK04781 histidinol-phosphate 99.6 9.6E-15 2.1E-19 132.9 13.9 168 97-278 64-242 (364)
251 PF06838 Met_gamma_lyase: Meth 99.6 5.9E-15 1.3E-19 128.8 11.8 177 93-278 55-245 (403)
252 PRK13393 5-aminolevulinate syn 99.6 2.1E-14 4.5E-19 132.6 16.2 195 58-278 60-266 (406)
253 PRK07392 threonine-phosphate d 99.6 1.9E-14 4.1E-19 130.8 15.5 199 47-277 23-237 (360)
254 PRK06434 cystathionine gamma-l 99.6 7.9E-15 1.7E-19 133.5 12.8 158 86-273 62-225 (384)
255 COG2008 GLY1 Threonine aldolas 99.6 2.6E-14 5.7E-19 124.7 14.0 201 54-278 6-220 (342)
256 COG1921 SelA Selenocysteine sy 99.6 5.3E-14 1.1E-18 125.0 15.9 201 53-278 34-243 (395)
257 TIGR01140 L_thr_O3P_dcar L-thr 99.6 1.6E-14 3.4E-19 129.8 12.6 155 97-277 52-215 (330)
258 KOG0053 Cystathionine beta-lya 99.6 2.3E-14 4.9E-19 127.9 13.3 151 98-271 83-239 (409)
259 PRK14808 histidinol-phosphate 99.6 3.1E-14 6.6E-19 128.1 13.5 193 47-278 20-224 (335)
260 PRK13578 ornithine decarboxyla 99.6 1.3E-14 2.8E-19 139.4 11.5 165 95-273 177-371 (720)
261 TIGR01366 serC_3 phosphoserine 99.6 1.1E-14 2.4E-19 132.2 9.4 196 49-277 5-205 (361)
262 PRK05664 threonine-phosphate d 99.5 5.2E-14 1.1E-18 126.4 12.0 153 97-278 54-214 (330)
263 PRK08637 hypothetical protein; 99.5 4.8E-13 1E-17 122.8 16.6 178 84-271 40-242 (388)
264 PRK06425 histidinol-phosphate 99.5 1.3E-13 2.9E-18 123.9 12.1 159 97-278 45-215 (332)
265 KOG1359 Glycine C-acetyltransf 99.5 1.1E-13 2.4E-18 117.0 10.4 212 47-287 68-293 (417)
266 KOG1368 Threonine aldolase [Am 99.5 1E-13 2.3E-18 117.3 10.3 195 58-277 34-244 (384)
267 PF03841 SelA: L-seryl-tRNA se 99.5 1.4E-14 3E-19 127.7 5.2 201 54-279 14-234 (367)
268 PLN02452 phosphoserine transam 99.5 2.7E-13 5.8E-18 122.7 13.0 209 47-279 7-221 (365)
269 TIGR03811 tyr_de_CO2_Ent tyros 99.5 6.4E-13 1.4E-17 126.5 16.0 176 85-273 116-399 (608)
270 PRK06959 putative threonine-ph 99.5 2.1E-13 4.5E-18 122.9 10.5 153 97-278 58-220 (339)
271 PLN02414 glycine dehydrogenase 99.5 1.8E-12 4E-17 129.1 16.1 189 58-276 117-318 (993)
272 PRK05367 glycine dehydrogenase 99.5 2E-12 4.3E-17 129.1 16.4 163 89-276 118-290 (954)
273 PRK15399 lysine decarboxylase 99.4 1.4E-12 3E-17 125.4 14.2 161 96-273 199-383 (713)
274 PRK15400 lysine decarboxylase 99.4 8.6E-13 1.9E-17 126.8 12.7 163 95-273 198-383 (714)
275 TIGR02617 tnaA_trp_ase tryptop 99.4 1.2E-12 2.7E-17 118.5 12.7 209 57-289 54-300 (467)
276 PRK07505 hypothetical protein; 99.4 5.8E-12 1.3E-16 116.2 17.4 203 47-276 47-269 (402)
277 KOG0256 1-aminocyclopropane-1- 99.4 6.5E-12 1.4E-16 110.7 16.3 178 83-273 116-320 (471)
278 KOG1357 Serine palmitoyltransf 99.4 6.1E-13 1.3E-17 118.4 8.8 229 23-281 103-369 (519)
279 COG1982 LdcC Arginine/lysine/o 99.4 1.3E-12 2.8E-17 121.2 10.7 165 96-273 74-248 (557)
280 cd00610 OAT_like Acetyl ornith 99.4 8.6E-12 1.9E-16 115.3 15.7 213 47-277 37-280 (413)
281 KOG1360 5-aminolevulinate synt 99.4 5.5E-12 1.2E-16 110.8 12.2 192 59-277 187-391 (570)
282 PRK12462 phosphoserine aminotr 99.4 7.7E-12 1.7E-16 112.4 12.4 207 48-280 5-220 (364)
283 COG4100 Cystathionine beta-lya 99.4 1.4E-11 3.1E-16 104.6 13.2 173 97-278 70-256 (416)
284 PRK00854 rocD ornithine--oxo-a 99.3 7.3E-11 1.6E-15 108.8 17.2 193 59-278 59-278 (401)
285 TIGR01365 serC_2 phosphoserine 99.3 2.3E-11 5E-16 110.3 11.8 195 51-279 7-207 (374)
286 KOG0258 Alanine aminotransfera 99.3 9.4E-11 2E-15 102.9 15.0 197 58-270 87-311 (475)
287 COG3977 Alanine-alpha-ketoisov 99.3 2.5E-10 5.4E-15 97.2 16.6 224 47-284 31-276 (417)
288 TIGR00707 argD acetylornithine 99.3 9.2E-11 2E-15 107.2 15.2 207 47-279 28-261 (379)
289 PRK03244 argD acetylornithine 99.3 2.1E-10 4.6E-15 105.7 16.1 196 58-278 60-273 (398)
290 PRK01278 argD acetylornithine 99.2 2.2E-10 4.9E-15 105.2 14.7 193 58-277 48-264 (389)
291 PTZ00125 ornithine aminotransf 99.2 5.6E-10 1.2E-14 102.8 16.6 198 58-278 48-269 (400)
292 PRK04073 rocD ornithine--oxo-a 99.2 1.4E-09 3E-14 100.2 16.5 193 58-278 57-277 (396)
293 KOG0634 Aromatic amino acid am 99.2 8.8E-10 1.9E-14 98.1 13.9 184 82-280 94-318 (472)
294 PRK02627 acetylornithine amino 99.1 1.3E-09 2.8E-14 100.2 13.9 205 47-278 40-272 (396)
295 TIGR03246 arg_catab_astC succi 99.0 6.5E-09 1.4E-13 95.8 15.4 195 58-279 52-270 (397)
296 PRK02936 argD acetylornithine 99.0 9.8E-09 2.1E-13 93.9 15.7 209 47-278 30-257 (377)
297 PRK05093 argD bifunctional N-s 99.0 1.1E-08 2.4E-13 94.4 15.8 195 58-279 57-275 (403)
298 PF02347 GDC-P: Glycine cleava 99.0 4.5E-09 9.7E-14 95.9 12.4 164 88-276 106-281 (429)
299 KOG0629 Glutamate decarboxylas 99.0 7.9E-10 1.7E-14 98.2 6.9 173 90-273 139-337 (510)
300 KOG0633 Histidinol phosphate a 99.0 3.6E-09 7.8E-14 88.5 9.6 160 100-277 77-248 (375)
301 KOG2040 Glycine dehydrogenase 99.0 1E-08 2.2E-13 95.4 13.2 159 90-265 580-750 (1001)
302 PRK03715 argD acetylornithine 99.0 1.9E-08 4.2E-13 92.5 15.2 191 58-275 53-266 (395)
303 TIGR00713 hemL glutamate-1-sem 99.0 2.5E-08 5.5E-13 92.6 16.1 204 47-278 49-284 (423)
304 COG4992 ArgD Ornithine/acetylo 98.9 2.7E-08 5.8E-13 89.1 13.3 213 47-287 43-284 (404)
305 TIGR01885 Orn_aminotrans ornit 98.9 7.5E-08 1.6E-12 88.8 16.9 197 58-278 54-277 (401)
306 PLN02624 ornithine-delta-amino 98.9 8.6E-08 1.9E-12 90.2 16.8 193 59-278 93-315 (474)
307 TIGR00461 gcvP glycine dehydro 98.9 1.6E-08 3.6E-13 100.2 12.0 161 91-276 108-278 (939)
308 COG0403 GcvP Glycine cleavage 98.9 8.6E-08 1.9E-12 85.7 14.8 159 96-275 124-294 (450)
309 KOG1383 Glutamate decarboxylas 98.9 1.6E-08 3.5E-13 91.0 10.2 171 89-273 117-305 (491)
310 PF12897 Aminotran_MocR: Alani 98.9 9.3E-08 2E-12 84.8 14.5 211 46-277 22-274 (425)
311 KOG3846 L-kynurenine hydrolase 98.8 5.2E-09 1.1E-13 89.5 6.2 206 57-275 78-295 (465)
312 KOG1358 Serine palmitoyltransf 98.8 5.9E-08 1.3E-12 85.6 12.7 200 47-274 95-319 (467)
313 COG0001 HemL Glutamate-1-semia 98.8 1.3E-07 2.8E-12 85.6 15.1 206 47-276 54-287 (432)
314 PRK04013 argD acetylornithine/ 98.8 1.5E-07 3.3E-12 85.5 15.7 192 58-274 41-247 (364)
315 PRK12381 bifunctional succinyl 98.8 7.3E-08 1.6E-12 89.1 13.3 199 58-278 56-273 (406)
316 PRK04260 acetylornithine amino 98.7 3.6E-07 7.9E-12 83.5 15.1 195 59-278 46-255 (375)
317 KOG0628 Aromatic-L-amino-acid/ 98.7 1.3E-07 2.8E-12 85.1 11.3 179 84-273 105-319 (511)
318 PRK05964 adenosylmethionine--8 98.7 3.3E-07 7.1E-12 85.2 13.8 204 58-278 59-291 (423)
319 PRK00062 glutamate-1-semialdeh 98.7 3.8E-07 8.2E-12 84.8 14.1 208 47-278 51-286 (426)
320 PRK08088 4-aminobutyrate amino 98.6 1.1E-06 2.4E-11 81.7 15.4 210 58-278 58-289 (425)
321 TIGR03372 putres_am_tran putre 98.6 1.7E-06 3.7E-11 80.6 16.5 196 58-278 92-315 (442)
322 COG3033 TnaA Tryptophanase [Am 98.6 6.6E-07 1.4E-11 78.4 11.8 110 180-289 167-302 (471)
323 PLN00144 acetylornithine trans 98.6 2.3E-06 4.9E-11 78.5 15.8 193 58-278 32-257 (382)
324 PRK12403 putative aminotransfe 98.6 2.9E-06 6.4E-11 79.6 16.5 205 58-277 71-312 (460)
325 PRK07046 aminotransferase; Val 98.6 1.9E-06 4.1E-11 80.6 14.9 195 58-278 92-306 (453)
326 PRK09264 diaminobutyrate--2-ox 98.5 3.4E-06 7.4E-11 78.4 15.6 200 58-275 56-286 (425)
327 COG1448 TyrB Aspartate/tyrosin 98.5 3.7E-06 8.1E-11 74.5 14.5 209 32-261 11-249 (396)
328 PF05889 SLA_LP_auto_ag: Solub 98.5 4E-08 8.7E-13 87.8 2.2 174 88-272 52-238 (389)
329 PLN02482 glutamate-1-semialdeh 98.5 1.1E-05 2.4E-10 75.8 18.4 193 58-278 116-335 (474)
330 COG1932 SerC Phosphoserine ami 98.5 7.3E-07 1.6E-11 78.5 9.0 205 47-279 5-221 (365)
331 PRK08117 4-aminobutyrate amino 98.5 7E-06 1.5E-10 76.6 15.9 202 58-277 60-296 (433)
332 PRK00615 glutamate-1-semialdeh 98.5 1.6E-05 3.5E-10 74.0 18.1 200 58-278 70-290 (433)
333 PRK08360 4-aminobutyrate amino 98.5 1.5E-05 3.2E-10 74.5 17.9 203 58-278 58-294 (443)
334 PRK05769 4-aminobutyrate amino 98.5 1.8E-05 3.9E-10 74.0 18.2 203 58-278 71-311 (441)
335 COG0160 GabT 4-aminobutyrate a 98.4 8E-06 1.7E-10 75.2 14.9 216 58-288 73-322 (447)
336 PRK13360 omega amino acid--pyr 98.4 2.2E-05 4.7E-10 73.4 17.9 206 58-278 63-306 (442)
337 PRK11522 putrescine--2-oxoglut 98.4 7.5E-06 1.6E-10 76.7 14.8 194 58-276 99-320 (459)
338 PRK04612 argD acetylornithine 98.4 9E-06 2E-10 75.2 14.8 202 58-277 57-276 (408)
339 TIGR02407 ectoine_ectB diamino 98.4 1.2E-05 2.6E-10 74.5 15.6 201 58-274 52-281 (412)
340 PRK06062 hypothetical protein; 98.4 1.1E-05 2.5E-10 75.4 15.3 202 58-278 70-305 (451)
341 PRK06058 4-aminobutyrate amino 98.4 2.2E-05 4.7E-10 73.5 17.0 204 58-278 73-309 (443)
342 PRK06541 hypothetical protein; 98.3 2.1E-05 4.5E-10 73.9 16.0 203 58-277 69-311 (460)
343 PRK09792 4-aminobutyrate trans 98.3 1.9E-05 4.2E-10 73.3 15.4 205 58-277 57-287 (421)
344 PRK12566 glycine dehydrogenase 98.3 3.1E-06 6.8E-11 84.0 10.2 154 96-276 128-292 (954)
345 PLN02760 4-aminobutyrate:pyruv 98.3 4.9E-05 1.1E-09 72.1 17.7 207 58-278 106-351 (504)
346 PRK07495 4-aminobutyrate amino 98.3 5.7E-05 1.2E-09 70.3 17.0 204 58-278 57-288 (425)
347 PRK06105 aminotransferase; Pro 98.3 6.2E-05 1.4E-09 70.7 17.3 204 58-277 65-308 (460)
348 PRK12389 glutamate-1-semialdeh 98.2 7.4E-05 1.6E-09 69.6 16.8 207 47-278 54-289 (428)
349 PLN02994 1-aminocyclopropane-1 98.2 4.1E-06 8.8E-11 66.5 7.0 60 84-147 88-152 (153)
350 PRK09221 beta alanine--pyruvat 98.2 0.00013 2.9E-09 68.2 17.6 204 58-278 66-309 (445)
351 PRK06777 4-aminobutyrate amino 98.2 7.8E-05 1.7E-09 69.3 15.9 205 58-278 57-288 (421)
352 PRK05639 4-aminobutyrate amino 98.2 7.9E-05 1.7E-09 69.9 15.8 201 58-276 70-310 (457)
353 PRK07986 adenosylmethionine--8 98.2 6.4E-05 1.4E-09 69.9 14.9 206 58-279 60-297 (428)
354 PF00202 Aminotran_3: Aminotra 98.2 3.7E-05 8.1E-10 69.4 13.0 204 58-279 33-268 (339)
355 PRK06082 4-aminobutyrate amino 98.2 0.00019 4.1E-09 67.5 17.8 200 58-276 88-317 (459)
356 PRK08593 4-aminobutyrate amino 98.2 0.00012 2.6E-09 68.5 16.4 205 58-278 59-297 (445)
357 TIGR00508 bioA adenosylmethion 98.2 7.8E-05 1.7E-09 69.4 15.1 206 58-279 62-300 (427)
358 PRK07678 aminotransferase; Val 98.1 0.00014 3.1E-09 68.1 16.9 202 58-278 64-304 (451)
359 TIGR00700 GABAtrnsam 4-aminobu 98.1 0.0001 2.2E-09 68.5 15.4 204 58-278 50-287 (420)
360 PRK06149 hypothetical protein; 98.1 0.00024 5.3E-09 72.7 18.6 205 58-279 600-836 (972)
361 PRK05630 adenosylmethionine--8 98.1 9.9E-05 2.2E-09 68.6 14.5 205 58-278 57-292 (422)
362 PRK06209 glutamate-1-semialdeh 98.1 0.00011 2.4E-09 68.5 14.5 91 183-277 173-271 (431)
363 PRK06943 adenosylmethionine--8 98.1 0.00029 6.2E-09 66.1 17.0 204 58-278 71-313 (453)
364 PRK05965 hypothetical protein; 98.0 0.00025 5.3E-09 66.7 16.2 205 58-278 63-306 (459)
365 TIGR00709 dat 2,4-diaminobutyr 98.0 0.00021 4.5E-09 66.9 15.7 199 58-274 56-292 (442)
366 PRK06173 adenosylmethionine--8 98.0 0.00017 3.7E-09 67.1 14.3 203 58-278 61-298 (429)
367 PRK07482 hypothetical protein; 98.0 0.00032 7E-09 65.9 16.3 204 58-277 67-310 (461)
368 PRK07036 hypothetical protein; 98.0 0.00071 1.5E-08 63.7 17.5 207 58-278 68-312 (466)
369 PRK07483 hypothetical protein; 97.9 0.00075 1.6E-08 63.1 17.5 205 58-279 47-292 (443)
370 PRK07480 putative aminotransfe 97.9 0.0006 1.3E-08 64.0 16.8 205 58-278 67-310 (456)
371 PRK06918 4-aminobutyrate amino 97.9 0.00059 1.3E-08 64.0 16.2 204 58-278 71-309 (451)
372 PRK06917 hypothetical protein; 97.9 0.00082 1.8E-08 63.0 16.5 204 58-279 48-292 (447)
373 PRK07481 hypothetical protein; 97.9 0.0011 2.3E-08 62.3 16.8 205 58-278 59-304 (449)
374 PRK06148 hypothetical protein; 97.8 0.00046 9.9E-09 70.9 15.4 206 58-280 639-877 (1013)
375 PRK07030 adenosylmethionine--8 97.8 0.00083 1.8E-08 63.3 16.0 203 58-277 64-305 (466)
376 PRK06916 adenosylmethionine--8 97.8 0.00038 8.3E-09 65.4 12.9 203 58-278 73-315 (460)
377 PRK06938 diaminobutyrate--2-ox 97.8 0.0011 2.4E-08 62.4 15.5 201 58-274 80-317 (464)
378 KOG1402 Ornithine aminotransfe 97.7 0.0015 3.2E-08 57.2 14.4 104 183-288 195-309 (427)
379 PRK08742 adenosylmethionine--8 97.7 0.0012 2.6E-08 62.2 15.1 203 58-277 81-327 (472)
380 PRK06931 diaminobutyrate--2-ox 97.7 0.0036 7.8E-08 58.9 17.1 202 58-274 75-311 (459)
381 TIGR03251 LAT_fam L-lysine 6-t 97.6 0.0022 4.8E-08 59.8 15.0 84 184-272 205-299 (431)
382 COG0161 BioA Adenosylmethionin 97.3 0.0042 9.2E-08 57.3 12.4 103 184-290 200-319 (449)
383 PRK08297 L-lysine aminotransfe 97.1 0.0048 1E-07 57.8 11.2 84 183-271 211-305 (443)
384 KOG1401 Acetylornithine aminot 97.1 0.013 2.9E-07 52.8 13.1 207 58-288 73-305 (433)
385 TIGR00699 GABAtrns_euk 4-amino 97.1 0.012 2.6E-07 55.3 13.4 76 183-261 237-325 (464)
386 KOG2790 Phosphoserine aminotra 96.9 0.015 3.3E-07 50.0 10.7 213 47-285 7-232 (370)
387 PLN02974 adenosylmethionine-8- 96.6 0.065 1.4E-06 53.8 14.8 89 185-277 567-675 (817)
388 PF04864 Alliinase_C: Allinase 96.4 0.0041 8.9E-08 55.0 4.3 154 90-273 45-211 (363)
389 KOG3843 Predicted serine hydro 96.3 0.0042 9.1E-08 52.9 3.7 184 89-281 54-250 (432)
390 KOG2040 Glycine dehydrogenase 96.2 0.095 2.1E-06 50.2 12.0 155 97-275 168-330 (1001)
391 KOG1404 Alanine-glyoxylate ami 96.2 0.037 8.1E-07 49.7 8.9 64 212-279 235-303 (442)
392 KOG1411 Aspartate aminotransfe 96.1 0.14 3E-06 45.5 11.8 196 47-261 53-276 (427)
393 KOG1412 Aspartate aminotransfe 95.4 0.12 2.7E-06 45.2 8.9 143 115-268 102-265 (410)
394 KOG1405 4-aminobutyrate aminot 94.6 0.09 2E-06 46.8 6.0 73 183-255 254-341 (484)
395 KOG1403 Predicted alanine-glyo 93.9 0.49 1.1E-05 41.4 8.9 203 58-277 62-299 (452)
396 PLN02672 methionine S-methyltr 83.2 21 0.00046 37.4 12.5 203 12-235 348-569 (1082)
397 COG2870 RfaE ADP-heptose synth 80.1 6.8 0.00015 35.9 6.8 49 183-231 129-179 (467)
398 PRK09375 quinolinate synthetas 78.7 24 0.00053 31.5 9.8 109 32-205 19-129 (319)
399 PRK13396 3-deoxy-7-phosphohept 75.1 11 0.00025 34.0 6.9 59 181-239 218-287 (352)
400 COG1504 Uncharacterized conser 72.9 11 0.00024 27.8 5.0 49 180-229 47-95 (121)
401 COG1105 FruK Fructose-1-phosph 72.4 16 0.00036 32.4 7.0 55 179-233 108-169 (310)
402 PRK13397 3-deoxy-7-phosphohept 68.9 23 0.0005 30.5 7.1 56 181-236 132-197 (250)
403 cd02067 B12-binding B12 bindin 67.9 20 0.00042 26.6 5.9 52 181-232 36-90 (119)
404 PRK12595 bifunctional 3-deoxy- 67.1 21 0.00045 32.6 6.8 96 179-274 232-343 (360)
405 cd05126 Mth938 Mth938 domain. 65.0 24 0.00053 26.5 5.8 50 181-231 45-94 (117)
406 PRK02261 methylaspartate mutas 65.0 31 0.00068 26.6 6.6 51 181-231 40-93 (137)
407 KOG0630 Predicted pyridoxal-de 64.1 19 0.0004 34.1 5.8 94 180-274 272-377 (838)
408 PF02310 B12-binding: B12 bind 63.4 18 0.00039 26.7 4.9 53 181-233 37-91 (121)
409 TIGR02026 BchE magnesium-proto 62.3 28 0.0006 33.2 7.0 55 179-234 47-103 (497)
410 TIGR01361 DAHP_synth_Bsub phos 61.7 37 0.0008 29.4 7.1 55 181-235 142-206 (260)
411 COG3010 NanE Putative N-acetyl 61.6 20 0.00044 29.8 5.0 71 181-257 85-156 (229)
412 TIGR03586 PseI pseudaminic aci 60.4 28 0.00061 31.3 6.3 84 179-266 141-235 (327)
413 PF04131 NanE: Putative N-acet 58.2 46 0.001 27.3 6.5 72 181-258 51-122 (192)
414 smart00642 Aamy Alpha-amylase 55.1 12 0.00026 30.0 2.8 26 206-231 66-91 (166)
415 cd02071 MM_CoA_mut_B12_BD meth 54.6 37 0.00081 25.4 5.3 51 181-231 36-89 (122)
416 PRK09590 celB cellobiose phosp 54.1 17 0.00037 26.7 3.2 57 197-257 3-59 (104)
417 COG3414 SgaB Phosphotransferas 53.7 34 0.00074 24.5 4.6 69 197-272 3-75 (93)
418 PF02603 Hpr_kinase_N: HPr Ser 53.4 20 0.00043 27.3 3.6 38 187-229 74-111 (127)
419 KOG2142 Molybdenum cofactor su 53.2 18 0.00039 35.2 3.9 189 88-291 60-256 (728)
420 PRK13398 3-deoxy-7-phosphohept 52.2 46 0.00099 29.0 6.1 55 181-235 144-208 (266)
421 TIGR00322 diphth2_R diphthamid 51.9 30 0.00065 31.2 5.1 79 179-261 2-84 (332)
422 smart00481 POLIIIAc DNA polyme 51.9 64 0.0014 21.0 6.4 47 180-228 13-59 (67)
423 cd02072 Glm_B12_BD B12 binding 51.0 58 0.0013 24.9 5.8 50 182-231 37-89 (128)
424 PF12813 XPG_I_2: XPG domain c 50.5 51 0.0011 28.3 6.1 38 213-273 32-69 (246)
425 cd05564 PTS_IIB_chitobiose_lic 50.1 27 0.00059 25.1 3.7 55 197-257 1-55 (96)
426 PF13378 MR_MLE_C: Enolase C-t 49.9 34 0.00074 24.9 4.4 50 181-230 4-53 (111)
427 KOG0352 ATP-dependent DNA heli 49.9 54 0.0012 30.7 6.2 45 195-240 113-159 (641)
428 PF02571 CbiJ: Precorrin-6x re 49.6 45 0.00098 28.7 5.6 93 115-227 2-97 (249)
429 PF00128 Alpha-amylase: Alpha 49.2 13 0.00027 32.3 2.3 29 203-231 45-73 (316)
430 cd05565 PTS_IIB_lactose PTS_II 49.2 32 0.00069 25.0 3.9 55 197-257 2-56 (99)
431 KOG1371 UDP-glucose 4-epimeras 49.0 41 0.00088 30.1 5.2 107 115-231 4-127 (343)
432 COG1087 GalE UDP-glucose 4-epi 48.6 1.7E+02 0.0037 26.1 8.9 101 115-231 2-119 (329)
433 PRK09441 cytoplasmic alpha-amy 48.3 16 0.00035 34.7 2.9 28 204-231 75-102 (479)
434 PRK13602 putative ribosomal pr 47.5 44 0.00095 23.3 4.3 45 184-230 16-60 (82)
435 COG0379 NadA Quinolinate synth 47.4 1.8E+02 0.0039 26.0 8.9 76 32-143 21-98 (324)
436 TIGR01501 MthylAspMutase methy 47.1 67 0.0015 24.8 5.7 49 182-230 39-90 (134)
437 KOG3974 Predicted sugar kinase 45.8 23 0.0005 30.6 3.1 47 183-231 91-140 (306)
438 COG1137 YhbG ABC-type (unclass 45.5 43 0.00092 28.1 4.5 43 187-230 150-197 (243)
439 TIGR02370 pyl_corrinoid methyl 45.1 79 0.0017 26.0 6.3 51 181-231 121-175 (197)
440 COG1954 GlpP Glycerol-3-phosph 44.8 41 0.0009 27.1 4.2 48 183-234 12-61 (181)
441 PF13380 CoA_binding_2: CoA bi 44.2 73 0.0016 23.7 5.4 42 184-231 69-110 (116)
442 PLN02673 quinolinate synthetas 44.2 3.4E+02 0.0074 27.1 11.4 90 32-143 256-351 (724)
443 TIGR00853 pts-lac PTS system, 44.2 39 0.00084 24.3 3.7 56 196-257 4-59 (95)
444 PRK13601 putative L7Ae-like ri 43.6 62 0.0013 22.6 4.6 45 185-231 14-58 (82)
445 cd00248 Mth938-like Mth938-lik 42.2 1.1E+02 0.0024 22.5 6.0 49 181-231 38-87 (109)
446 PRK08057 cobalt-precorrin-6x r 42.0 2.2E+02 0.0049 24.4 9.0 90 115-226 4-95 (248)
447 TIGR00789 flhB_rel flhB C-term 41.7 23 0.0005 24.8 2.1 21 211-231 28-48 (82)
448 PF01248 Ribosomal_L7Ae: Ribos 40.7 71 0.0015 22.5 4.7 46 184-231 20-66 (95)
449 cd00984 DnaB_C DnaB helicase C 40.6 1E+02 0.0023 25.7 6.6 49 180-228 104-168 (242)
450 TIGR01768 GGGP-family geranylg 40.4 80 0.0017 26.7 5.6 46 182-228 15-60 (223)
451 PRK15452 putative protease; Pr 40.4 66 0.0014 30.3 5.6 10 182-191 43-52 (443)
452 PF02571 CbiJ: Precorrin-6x re 40.4 29 0.00063 29.8 3.0 25 211-235 54-78 (249)
453 cd05560 Xcc1710_like Xcc1710_l 40.2 1.2E+02 0.0025 22.4 5.9 49 181-231 39-87 (109)
454 cd02069 methionine_synthase_B1 39.9 98 0.0021 25.9 6.1 51 181-231 125-177 (213)
455 COG0352 ThiE Thiamine monophos 39.5 60 0.0013 27.2 4.7 47 184-231 24-73 (211)
456 PF14639 YqgF: Holliday-juncti 39.4 36 0.00077 26.8 3.2 43 181-223 49-91 (150)
457 PF03652 UPF0081: Uncharacteri 39.3 1.1E+02 0.0024 23.5 5.9 55 179-233 35-98 (135)
458 PLN00125 Succinyl-CoA ligase [ 38.9 72 0.0016 28.3 5.3 47 184-231 83-129 (300)
459 COG2099 CobK Precorrin-6x redu 38.1 75 0.0016 27.4 5.1 27 208-234 51-77 (257)
460 PRK04169 geranylgeranylglycery 37.6 91 0.002 26.5 5.5 52 175-228 14-65 (232)
461 PRK06683 hypothetical protein; 37.6 78 0.0017 22.0 4.3 45 185-231 17-61 (82)
462 cd02070 corrinoid_protein_B12- 37.3 95 0.0021 25.5 5.6 51 181-231 119-173 (201)
463 KOG2865 NADH:ubiquinone oxidor 37.1 2.2E+02 0.0047 25.4 7.7 98 116-225 63-170 (391)
464 TIGR00640 acid_CoA_mut_C methy 36.8 94 0.002 23.8 5.1 48 182-229 40-90 (132)
465 COG0296 GlgB 1,4-alpha-glucan 36.5 40 0.00086 33.1 3.6 30 203-232 207-236 (628)
466 cd03319 L-Ala-DL-Glu_epimerase 36.3 75 0.0016 28.1 5.2 50 180-229 236-285 (316)
467 PRK01018 50S ribosomal protein 36.3 86 0.0019 22.6 4.6 43 185-229 22-64 (99)
468 PF07905 PucR: Purine cataboli 36.2 1.2E+02 0.0027 22.6 5.7 39 189-228 66-104 (123)
469 COG1646 Predicted phosphate-bi 36.1 1.9E+02 0.004 24.7 7.0 56 175-231 22-78 (240)
470 PRK05678 succinyl-CoA syntheta 36.1 79 0.0017 27.9 5.1 46 184-231 79-124 (291)
471 TIGR01019 sucCoAalpha succinyl 36.0 80 0.0017 27.8 5.1 51 184-238 77-127 (286)
472 TIGR00272 DPH2 diphthamide bio 35.6 1E+02 0.0023 29.4 6.2 77 181-261 36-119 (496)
473 PF14871 GHL6: Hypothetical gl 35.0 1.7E+02 0.0037 22.4 6.3 46 183-228 1-62 (132)
474 COG2877 KdsA 3-deoxy-D-manno-o 34.9 68 0.0015 27.4 4.2 40 195-235 159-202 (279)
475 PRK08673 3-deoxy-7-phosphohept 34.5 1.4E+02 0.0031 26.9 6.6 56 181-236 210-275 (335)
476 COG1435 Tdk Thymidine kinase [ 34.1 2.7E+02 0.0059 23.1 7.8 89 128-229 24-116 (201)
477 cd03315 MLE_like Muconate lact 34.0 1.1E+02 0.0023 26.3 5.6 51 180-230 188-238 (265)
478 PTZ00106 60S ribosomal protein 33.8 90 0.0019 23.0 4.4 43 185-229 31-73 (108)
479 cd02065 B12-binding_like B12 b 33.6 1.4E+02 0.0031 21.8 5.7 54 182-235 37-92 (125)
480 PTZ00314 inosine-5'-monophosph 33.6 2.2E+02 0.0047 27.3 8.0 95 128-231 245-352 (495)
481 COG2099 CobK Precorrin-6x redu 33.6 2.7E+02 0.0058 24.1 7.7 91 115-226 4-96 (257)
482 COG0826 Collagenase and relate 33.1 96 0.0021 28.2 5.3 10 182-191 46-55 (347)
483 PRK05583 ribosomal protein L7A 32.8 1.2E+02 0.0026 22.2 4.8 44 184-229 22-65 (104)
484 TIGR00034 aroFGH phospho-2-deh 32.4 59 0.0013 29.4 3.7 29 210-238 239-269 (344)
485 PRK07315 fructose-bisphosphate 32.4 98 0.0021 27.3 5.1 43 183-226 88-133 (293)
486 PF00289 CPSase_L_chain: Carba 32.2 1.2E+02 0.0027 22.3 4.9 44 181-227 60-103 (110)
487 PRK08057 cobalt-precorrin-6x r 32.0 45 0.00098 28.7 2.9 25 211-235 53-77 (248)
488 TIGR01362 KDO8P_synth 3-deoxy- 32.0 2.1E+02 0.0045 24.8 6.8 54 179-233 124-185 (258)
489 COG0552 FtsY Signal recognitio 31.8 68 0.0015 28.9 4.0 99 182-289 209-319 (340)
490 COG2515 Acd 1-aminocyclopropan 31.7 3.8E+02 0.0082 24.0 9.4 47 93-143 167-214 (323)
491 TIGR00715 precor6x_red precorr 31.6 2.7E+02 0.0059 24.0 7.6 93 115-226 2-95 (256)
492 TIGR00160 MGSA methylglyoxal s 31.5 1.4E+02 0.0031 23.3 5.2 49 185-233 63-114 (143)
493 KOG1138 Predicted cleavage and 31.5 2.3E+02 0.0051 27.1 7.4 74 115-201 392-472 (653)
494 COG1066 Sms Predicted ATP-depe 31.2 1.3E+02 0.0027 28.1 5.6 48 181-228 154-215 (456)
495 PF02445 NadA: Quinolinate syn 31.1 1.3E+02 0.0028 26.6 5.5 26 115-143 48-75 (296)
496 TIGR00196 yjeF_cterm yjeF C-te 30.9 94 0.002 26.8 4.8 45 184-231 83-127 (272)
497 PLN00196 alpha-amylase; Provis 30.7 44 0.00095 31.3 2.8 27 205-231 87-113 (428)
498 TIGR00629 uvde UV damage endon 30.6 61 0.0013 28.9 3.5 33 202-234 191-223 (312)
499 TIGR01769 GGGP geranylgeranylg 30.5 1.1E+02 0.0024 25.5 4.8 40 189-228 18-58 (205)
500 PRK06806 fructose-bisphosphate 30.3 1.4E+02 0.0031 26.1 5.8 51 182-233 85-138 (281)
No 1
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.4e-44 Score=314.43 Aligned_cols=239 Identities=52% Similarity=0.843 Sum_probs=228.8
Q ss_pred CcccccCHHHHHHHHHHHHHHHcCceecCCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHH
Q 022564 25 APLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEA 104 (295)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~ 104 (295)
..+...++.+++.+.+|..+|++.|+|+++||++|+.|++++...+.++|.+|||+.+||+++++.+++|+.+.+..+++
T Consensus 5 ~~l~~~d~~i~~~i~~e~~rq~~~ieLIASEN~~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~L 84 (413)
T COG0112 5 ASLADYDPEIFEAIQQELERQREHIELIASENFTSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKL 84 (413)
T ss_pred hhHHhcCHHHHHHHHHHHHHHhhceeeeeccccCCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHH
Confidence 45667899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCH
Q 022564 105 FRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDY 184 (295)
Q Consensus 105 ~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~ 184 (295)
||++.. +|.+.||+.||++++.++++|||+|+-.+..|++|++... .+.+.|..+..++++++++++.+|+
T Consensus 85 Fga~~a----nVQPhSGs~AN~av~~All~pGDtimgm~l~~GGHltHg~-----~v~~sG~~~~~v~Y~vd~et~~IDy 155 (413)
T COG0112 85 FGAEYA----NVQPHSGSQANQAVYLALLQPGDTIMGLDLSHGGHLTHGS-----PVNFSGKLFNVVSYGVDPETGLIDY 155 (413)
T ss_pred hCCCcc----ccCCCCchHHHHHHHHHHcCCCCeEecccCCCCCcccCCC-----CCCccceeEEeEecccccccCccCH
Confidence 999984 9999999999999999999999999999999999999875 4557888899999999988999999
Q ss_pred HHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCc
Q 022564 185 DQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPR 264 (295)
Q Consensus 185 e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~ 264 (295)
|++++.+.+.+||+|+.+.|.++...|.+++.+||++.|+++++|.||.+|.+..+.+++|+..+|++++++||+|.||+
T Consensus 156 D~~~k~a~e~kPK~ii~G~SaY~r~id~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~~~AdvVTtTTHKTlrGPr 235 (413)
T COG0112 156 DEVEKLAKEVKPKLIIAGGSAYSRPIDFKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLPHADVVTTTTHKTLRGPR 235 (413)
T ss_pred HHHHHHHHHhCCCEEEECccccccccCHHHHHHHHHHhCceEEehHHHHHHHHhcccCCCCCCccceEeCCcccCCCCCC
Confidence 99999999889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEeC
Q 022564 265 GAMIFFRK 272 (295)
Q Consensus 265 gG~l~~~~ 272 (295)
||+|++++
T Consensus 236 GG~Il~~~ 243 (413)
T COG0112 236 GGIILTND 243 (413)
T ss_pred ceEEEecc
Confidence 99999997
No 2
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-44 Score=310.04 Aligned_cols=272 Identities=75% Similarity=1.178 Sum_probs=257.3
Q ss_pred CCcchhccCcccccCHHHHHHHHHHHHHHHcCceecCCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHH
Q 022564 17 VTWPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESL 96 (295)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~ 96 (295)
....+.++..|...+|++++.+..|..+|+.+|.|+++|||++..|++|+...+.+.|++|||+.+||+++++++++|..
T Consensus 11 ~~~~~~~~~~l~~~DPev~~ii~~Ek~RQ~~gieLIaSENFts~aVmeAlGS~ltNKYSEGyPG~RYYGGne~ID~iE~L 90 (477)
T KOG2467|consen 11 AAVIKLGNTPLEEVDPEVHDIIEKEKERQKRGIELIASENFTSRAVMEALGSCLTNKYSEGYPGARYYGGNEYIDQIELL 90 (477)
T ss_pred hhhhhhhcCchhhcChHHHHHHHHHHHhhhcceeEeecccchHHHHHHHHhHHhhcccccCCCcccccCcchHHHHHHHH
Confidence 34567788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecC
Q 022564 97 CQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 176 (295)
Q Consensus 97 ~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 176 (295)
++++..+.|+++++.|+|+|..-||+-||+++..++++|+|+|+-.+..+++|++.+|....+.+.....-++..|+.++
T Consensus 91 Cq~RALeaF~ldp~kWGVNVQp~SGSPANfavYtall~Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~ 170 (477)
T KOG2467|consen 91 CQKRALEAFGLDPEKWGVNVQPYSGSPANFAVYTALLKPHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVD 170 (477)
T ss_pred HHHHHHHHhCCCHHHCceeeccCCCCchhhHHHhhhcCCCCeeeeccCCCCCccccccccCCceeeeeeeecccCceeeC
Confidence 99999999999999999999999999999999999999999999999999999999998777777777777888999999
Q ss_pred CCCCCCCHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCC
Q 022564 177 ESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTT 256 (295)
Q Consensus 177 ~~~~~id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~ 256 (295)
++++-||+|.||+.....+||+|+.+.+.++...|.+++.+||.+.|+++++|.||-.|.+..++-++||.++|++++++
T Consensus 171 ~~TG~IDYD~Le~~A~~frPk~iiaG~SaY~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFey~DiVTTTT 250 (477)
T KOG2467|consen 171 PSTGYIDYDKLEKTATLFRPKLIIAGTSAYSRLIDYARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFEYCDIVTTTT 250 (477)
T ss_pred CCCCceehHHHHHHHHhcCCcEEEeccccchhhccHHHHHHHHHhcCceeehhhhhHHHHHhcccCCCcccccceeeccc
Confidence 99999999999999888899999998999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCceEEEEEeCCchhhh-ccCCeeEEEe
Q 022564 257 HKSLRGPRGAMIFFRKGVKEIN-KQGKEFTCRC 288 (295)
Q Consensus 257 ~K~l~gp~gG~l~~~~~~~~~~-~~~~~~~~~~ 288 (295)
||+|.||+||+|++|+.++.+. +.|+++.|..
T Consensus 251 HKsLRGPRg~mIFyRkGvk~~~~k~g~~i~ydl 283 (477)
T KOG2467|consen 251 HKSLRGPRGAMIFYRKGVKSIKPKQGKEILYDL 283 (477)
T ss_pred cccccCCcceeEEEeccCCcCCCCCCCcceech
Confidence 9999999999999999998887 6688888864
No 3
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=100.00 E-value=2.7e-44 Score=322.72 Aligned_cols=259 Identities=54% Similarity=0.929 Sum_probs=210.0
Q ss_pred ccccCHHHHHHHHHHHHHHHcCceecCCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcC
Q 022564 27 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR 106 (295)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g 106 (295)
|+..+|.+++.+.+|..+++++|+|+++||+++|.|++++...+.++|++|+|+.+||+++...+++|+.+.+.++++|+
T Consensus 1 l~~~d~ei~~li~~e~~rq~~~l~LiaSEN~~Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~ 80 (399)
T PF00464_consen 1 LKEFDPEIYELIEKEEERQRSTLNLIASENYMSPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFG 80 (399)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHSEE-CTT-----HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT
T ss_pred CcccCHHHHHHHHHHHHHHhcCccccCcccccCHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhC
Confidence 35679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHH
Q 022564 107 LDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 186 (295)
Q Consensus 107 ~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~ 186 (295)
++++.|.++|.+.||+.|+++++.++++|||+|+..++.+++|++.......+.+...+..+..++++++++++.+|+|+
T Consensus 81 ~~~~~w~anvqp~SGs~An~av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~~~~ID~d~ 160 (399)
T PF00464_consen 81 AEPKEWYANVQPHSGSQANLAVYMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPDTGLIDYDE 160 (399)
T ss_dssp -STTTEEEE---SSHHHHHHHHHHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB-HHH
T ss_pred CCcccceEEeecCCchHHHHHHHHHHHhhcCcEEecChhhcccccccccccccccccccceEEEEeeeeecCCCeECHHH
Confidence 99999999999999999999999999999999999999999999887755444444567778889999998899999999
Q ss_pred HHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCceE
Q 022564 187 LEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGA 266 (295)
Q Consensus 187 l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~gG 266 (295)
+++.+++.+||+|+++.++++...|++++.+||++.|+++++|.+|.+|.+..++.++|+.++|++++|+||+|.||+||
T Consensus 161 l~~~a~~~kPklIi~G~S~y~~~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~~~ADvvt~sThKtl~GPrgg 240 (399)
T PF00464_consen 161 LEKLAKEHKPKLIICGASSYPRPIDFKRFREIADEVGAYLMADISHIAGLIAGGLFPNPFPYADVVTGSTHKTLRGPRGG 240 (399)
T ss_dssp HHHHHHHH--SEEEEE-SSTSS---HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GCCTSSEEEEESSGGG-SSS-E
T ss_pred HHHHHhhcCCCEEEECchhccCccCHHHHHHHHHhcCcEEEecccccccceehheecCccccceEEEeeccccccccCce
Confidence 99999988999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCchhhhccCCeeE
Q 022564 267 MIFFRKGVKEINKQGKEFT 285 (295)
Q Consensus 267 ~l~~~~~~~~~~~~~~~~~ 285 (295)
+|+++++.+++.++++.+.
T Consensus 241 iI~~~~~~~~~~~~~~~~~ 259 (399)
T PF00464_consen 241 IILTNKGSKNVDKKGKEID 259 (399)
T ss_dssp EEEES-SEEEE-TTS-EEE
T ss_pred EEEEcCCccccCCcccccH
Confidence 9999988777776666544
No 4
>PLN02271 serine hydroxymethyltransferase
Probab=100.00 E-value=5.5e-43 Score=321.77 Aligned_cols=253 Identities=61% Similarity=1.037 Sum_probs=232.1
Q ss_pred cCcccccCHHHHHHHHHHHHHHHcCceecCCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHH
Q 022564 24 NAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALE 103 (295)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~ 103 (295)
+..+...+|.+++.+.+|..+++++|+|+++||++++.|++++...+.++|++|+|+.+||++++.++++|..+.+..++
T Consensus 126 ~~~l~~~Dpei~~li~~E~~rQ~~~l~LIASEN~~S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~la~era~~ 205 (586)
T PLN02271 126 NQPLPEADPDIHELMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERLCCERALA 205 (586)
T ss_pred hccHhhhCHHHHHHHHHHHHHHhcCeeeccccccCCHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHHHHHHHHH
Confidence 44678889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccc-cccccceeeeEEEeeecCCCCCCC
Q 022564 104 AFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDT-KKISAVSIFFETMPYRLNESTGYI 182 (295)
Q Consensus 104 ~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~~~~i 182 (295)
+||+++++|+++|...||+.|+.+++.++++|||+|+..+.+|++|+++.+.... ..+...|..++.++|+++++++.+
T Consensus 206 lF~~~~~~~gaNVQp~SGs~AN~aV~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~~g~I 285 (586)
T PLN02271 206 AFGLDSEKWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQTGYI 285 (586)
T ss_pred HhCCcccccccceeeccHHHHHHHHHHHhcCCCCEEEEecCCCCCchhcccccccccccccccceEEEEEcccccccCcc
Confidence 9999998898999999999999999999999999999999999999988753311 234567777888998888788999
Q ss_pred CHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCC
Q 022564 183 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRG 262 (295)
Q Consensus 183 d~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~g 262 (295)
|++++++.+...+||+|+++.+.++...|+++|.++|+++|+++++|+||.+|.+..+..+.|+.++|++++++||||.|
T Consensus 286 Dyd~lek~a~~~rPKLII~g~Saypr~~D~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~~sP~~~aDvvt~TTHKtLrG 365 (586)
T PLN02271 286 DYDKLEEKALDFRPKILICGGSSYPREWDYARFRQIADKCGAVLMCDMAHISGLVAAKECVNPFDYCDIVTSTTHKSLRG 365 (586)
T ss_pred CHHHHHHHhhhcCCeEEEECchhccCcCCHHHHHHHHHHcCCEEEEECcccccccccCcCCCCCcCCcEEEeCCcccCCC
Confidence 99999996655699999999888889999999999999999999999999999999999999988999999999999999
Q ss_pred CceEEEEEeCCchh
Q 022564 263 PRGAMIFFRKGVKE 276 (295)
Q Consensus 263 p~gG~l~~~~~~~~ 276 (295)
|+||++++++++..
T Consensus 366 PrGG~I~~r~~~~~ 379 (586)
T PLN02271 366 PRGGIIFYRKGPKL 379 (586)
T ss_pred CCceEEEecccccc
Confidence 99999999887553
No 5
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=100.00 E-value=7.5e-39 Score=297.81 Aligned_cols=263 Identities=79% Similarity=1.219 Sum_probs=230.1
Q ss_pred cccCCCcchhccCcccccCHHHHHHHHHHHHHHHcCceecCCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHH
Q 022564 13 EKNGVTWPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDM 92 (295)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~ 92 (295)
+++-+.++++....+...+|.+++.+.+|..++++.|+|+++||++++.+++++...+.++|.+|+++.++|+|+...++
T Consensus 1 ~~~~~~~~~~~~~~~~~~d~~~~~~i~~e~~~q~~~l~liasen~~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~ 80 (475)
T PLN03226 1 EKSMVSVPKWGNAPLEEVDPEIADIIEKEKRRQWKGLELIASENFTSRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQ 80 (475)
T ss_pred CcchhhhhhcchhhhhhcCHHHHHHHHHHHHHHHcCeeEecCCccCCHHHHHHHhhHHhccccCCCCCCcCcCCChhHHH
Confidence 35667788888888999999999999999999999999999999999999999999998889999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEe
Q 022564 93 AESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMP 172 (295)
Q Consensus 93 l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~ 172 (295)
+|+.+++..+++|+.+.+.|.+++.+.||+.||.+++.++++|||+|+..+..+++|++..+......+...+..+..++
T Consensus 81 lE~~~~~~~~~~f~~~~~~~~~nv~~~SG~~AN~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~ 160 (475)
T PLN03226 81 IETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFAVYTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMP 160 (475)
T ss_pred HHHHHHHHHHHHhCCCcceeEEecCcCchHHHHHHHHHHhCCCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeee
Confidence 99999999999999988776667778999999999999999999999998888899887654322222233444455567
Q ss_pred eecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEE
Q 022564 173 YRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVV 252 (295)
Q Consensus 173 ~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~ 252 (295)
+.++.+++.+|++++++++...++++|+++.++++...|+++|.++|+++|+++++|+||++|.+..+..+.++.++|++
T Consensus 161 y~~~~~~g~iD~d~Le~~l~~~~pklIv~~~S~~s~~~D~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~p~~~~Div 240 (475)
T PLN03226 161 YRLDESTGLIDYDKLEKKAMLFRPKLIIAGASAYPRDWDYARMRKIADKVGALLMCDMAHISGLVAAQEAASPFEYCDVV 240 (475)
T ss_pred eeecCCCCCcCHHHHHHHHhhcCCeEEEEecCcCCCccCHHHHHHHHHHcCCEEEEEchhhhCcccCCCCCCCCCCCeEE
Confidence 77776788999999999997658888877778889999999999999999999999999999999988877777789999
Q ss_pred EeCCCCCCCCCceEEEEEeCCch
Q 022564 253 TTTTHKSLRGPRGAMIFFRKGVK 275 (295)
Q Consensus 253 ~~s~~K~l~gp~gG~l~~~~~~~ 275 (295)
++++||||+||.||+++++++..
T Consensus 241 ~~t~hK~L~GP~Gg~I~~~~~~~ 263 (475)
T PLN03226 241 TTTTHKSLRGPRGGMIFFRKGPK 263 (475)
T ss_pred EecCcccccCCCceEEEEchhhc
Confidence 99999999999999999988755
No 6
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=100.00 E-value=2.1e-38 Score=290.55 Aligned_cols=252 Identities=37% Similarity=0.637 Sum_probs=222.5
Q ss_pred CcccccCHHHHHHHHHHHHHHHcCceecCCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHH
Q 022564 25 APLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEA 104 (295)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~ 104 (295)
..+...+|.+++.+.+|..+|+++|+|+++||++++.|++++...+.++|.+|+|+.+||+++...+++|..+.+..+++
T Consensus 28 ~~l~~~d~~~~~~~~~e~~rq~~~l~LiasEN~~s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~l 107 (493)
T PRK13580 28 DVILHVEPRIAEAIRQELADQRSSLKLIASENYSSLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKEL 107 (493)
T ss_pred HHHHhhCHHHHHHHHHHHHHHhcCceEecccccCCHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHHHHHHH
Confidence 45677899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCcceeEEeCCChHHHHHHHHhhcCC-------------------------------CCeEEEecCCCCcccCcc
Q 022564 105 FRLDPEKWGVNVQSLSGSPSNFQVYTALLKP-------------------------------HDRIMALDLPHGGHLSHG 153 (295)
Q Consensus 105 ~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~-------------------------------gd~Vl~~~~~~~~~~~~~ 153 (295)
||+++. +|...||+.||++++.++++| ||+|+..++.+++|++..
T Consensus 108 f~a~~a----nvqp~Sg~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg 183 (493)
T PRK13580 108 FGAEHA----YVQPHSGADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHG 183 (493)
T ss_pred hCCCcc----cccCCCcHHHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecC
Confidence 999984 999999999999999999976 899999999999999887
Q ss_pred ccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEE-cCCCCCCccCHHHHHHHHHHcCCEEEEEccc
Q 022564 154 YQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASAYARLYDYERIRKVCNKQKAIMLADMAH 232 (295)
Q Consensus 154 ~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l-~~~n~~~~~~l~~I~~ia~~~~~~vivD~a~ 232 (295)
+ ...+.+..+...+++++.+++.+|++++++.+++ +++.|++ +.+|++...|+++|.++|+++|+++++|+||
T Consensus 184 ~-----~~n~~~~~~~~~~y~vd~~~g~iD~d~l~~~~~~-~~plvii~g~S~~~~~~dl~~i~eia~~~gA~L~VD~AH 257 (493)
T PRK13580 184 F-----RPNISGKMFHQRSYGVDPDTGLLDYDEIAALARE-FKPLILVAGYSAYPRRVNFAKLREIADEVGAVLMVDMAH 257 (493)
T ss_pred c-----ccchhhheeeeEecccCcccCccCHHHHHHHHhh-cCCEEEEeCccccCCCcCHHHHHHHHHHcCCEEEEECch
Confidence 5 3345666677788888877889999999999988 5555555 5888888889999999999999999999999
Q ss_pred cccccccCCCC---CCCCcceEEEeCCCCCCCCCceEEEEEeCCchhhhccCCeeEE
Q 022564 233 ISGLVAAGVIP---SPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEFTC 286 (295)
Q Consensus 233 ~~g~~~~~~~~---~~~~~~D~~~~s~~K~l~gp~gG~l~~~~~~~~~~~~~~~~~~ 286 (295)
++|.+..+... .++.++|++++|+||||+||.||++++++++.+...+..++.|
T Consensus 258 ~~Gligg~~~~~~~~~~~~~D~vtgT~hKaL~GP~GG~I~~~~~l~~~L~~a~P~i~ 314 (493)
T PRK13580 258 FAGLVAGKVFTGDEDPVPHADIVTTTTHKTLRGPRGGLVLAKKEYADAVDKGCPLVL 314 (493)
T ss_pred hhceeccccchhhcCCCCCCcEEEeCChhhccCCCeEEEEecHHHHHHHhhCCCccc
Confidence 99999876643 4555799999999999999999999999987665544444433
No 7
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=100.00 E-value=1.4e-36 Score=283.09 Aligned_cols=251 Identities=67% Similarity=1.117 Sum_probs=213.0
Q ss_pred cCcccccCHHHHHHHHHHHHHHHcCceecCCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHH
Q 022564 24 NAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALE 103 (295)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~ 103 (295)
+..+.+.++.+++.+.+|..+++++|+|.++||++||.|++++...+.+.|.+|+|+++++.+....+.+++.+++.+++
T Consensus 12 ~~~~~~~d~~~~~~~~~~~~~~~~~l~l~~sen~~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~ 91 (452)
T PTZ00094 12 NQSLKEADPELYELIEKEKERQIEGLELIASENFTSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALE 91 (452)
T ss_pred hhhHhhhCHHHHHHHHHHHHHHHcCeeEecccccCCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHH
Confidence 34477889999999999988889999999999999999999999999999999999999999999999999889999999
Q ss_pred HcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCC
Q 022564 104 AFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYID 183 (295)
Q Consensus 104 ~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id 183 (295)
+||+++++|.+++.+++|+.++.+++.+++++||+|++...+|+++..++...........+..+...+++++ .++.+|
T Consensus 92 lf~a~~~~~~~~~~~~sgt~an~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~-~~g~id 170 (452)
T PTZ00094 92 AFGLDPEEWGVNVQPYSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVN-EKGLID 170 (452)
T ss_pred HhCCCcccceeecCCCchHHHHHHHHHHhcCCCCEEEecccccCCcccccccccccccccceeeeeeeecccC-CCCCcC
Confidence 9999887443444455677799988999999999999999999999887654322222233333444555566 358999
Q ss_pred HHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCC
Q 022564 184 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGP 263 (295)
Q Consensus 184 ~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp 263 (295)
++++++++++.++++++++.+++|...|+++|.++|+++|+++++|++|++|.++.+..+.++.++|++++|+||||+||
T Consensus 171 ~~~L~~~l~~~~~~lvi~~~s~~g~~~di~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~~~~~~D~l~~S~hK~l~GP 250 (452)
T PTZ00094 171 YDKLEELAKAFRPKLIIAGASAYPRDIDYKRFREICDSVGAYLMADIAHTSGLVAAGVLPSPFPYADVVTTTTHKSLRGP 250 (452)
T ss_pred HHHHHHHHHHhCCCEEEEeCCCCCCccCHHHHHHHHHHcCCEEEEeccchhccccCCCCCCCCCCCcEEEcCCccCCCCC
Confidence 99999999765788888766778999999999999999999999999999999998877767678999999999999999
Q ss_pred ceEEEEEeCCch
Q 022564 264 RGAMIFFRKGVK 275 (295)
Q Consensus 264 ~gG~l~~~~~~~ 275 (295)
.||++++++++.
T Consensus 251 ~Gg~l~~~~~~~ 262 (452)
T PTZ00094 251 RSGLIFYRKKVK 262 (452)
T ss_pred CceEEEEecccc
Confidence 999999987654
No 8
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=100.00 E-value=1.5e-31 Score=246.61 Aligned_cols=244 Identities=51% Similarity=0.799 Sum_probs=202.9
Q ss_pred hccCcccccCHHHHHHHHHHHHHHHcCceecCCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHH
Q 022564 22 QLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA 101 (295)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~l 101 (295)
+++..+++.+++++..+.+|..++.+.|||.+++|+++|.+++++...+.++|..|+++++.+++++...++|+.+++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~sen~~~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~l 83 (416)
T PRK13034 4 FFSDSLEEYDDEVFAAINKELERQQDHLELIASENFTSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIERA 83 (416)
T ss_pred hhhhhHhhhCHHHHHHHHHHHHHHhcCeeecccccCCCHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHHH
Confidence 56788899999999999999989999999999999999999999999987778888999999999888999998888899
Q ss_pred HHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCC
Q 022564 102 LEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGY 181 (295)
Q Consensus 102 a~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~ 181 (295)
++++|.+.. .+.+.||+.|+.+++.++++|||+|++....|.+++...... ...+.....+.++++..++.
T Consensus 84 a~l~g~~~a----lv~~~SG~~A~~~~l~al~~~GD~Vl~~~~~~~~~~~~g~~~-----~~~~~~~~~~~~~~~~~~~~ 154 (416)
T PRK13034 84 KQLFGCDYA----NVQPHSGSQANGAVYLALLKPGDTILGMSLSHGGHLTHGAKV-----SLSGKWYNAVQYGVDRLTGL 154 (416)
T ss_pred HHHhCCCce----EEecCCcHHHHHHHHHHhcCCCCEEEEcCccceeeeecCCcc-----eeccceeeeEEcccccccCC
Confidence 999998862 455678888999899999999999999998887753322100 01122222234455545678
Q ss_pred CCHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCC
Q 022564 182 IDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLR 261 (295)
Q Consensus 182 id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~ 261 (295)
+|++++++.++..++|+|+++.+.+|...|+++|.++|++||+++++|+||++|.+..+....++.++|++++|+||+|+
T Consensus 155 ~d~~~le~~l~~~~~klVi~~~~~~g~~~dl~~l~~la~~~g~~livD~Aha~G~~~~g~~~~~~~~~Di~~~s~~K~l~ 234 (416)
T PRK13034 155 IDYDEVEELAKEHKPKLIIAGFSAYPRELDFARFREIADEVGALLMVDMAHIAGLVAAGEHPNPFPHAHVVTTTTHKTLR 234 (416)
T ss_pred cCHHHHHHHHhhcCCeEEEECCCccccccCHHHHHHHHHHcCCEEEEeCcccccCcccCCCCCCCCCceEEEEeCcccCC
Confidence 99999999986557888888667778888999999999999999999999999998877766666679999999999999
Q ss_pred CCceEEEEEeCCc
Q 022564 262 GPRGAMIFFRKGV 274 (295)
Q Consensus 262 gp~gG~l~~~~~~ 274 (295)
||.||+++++++.
T Consensus 235 g~~GG~v~~~~~~ 247 (416)
T PRK13034 235 GPRGGMILTNDEE 247 (416)
T ss_pred CCCCeEEEECcHH
Confidence 9999998887653
No 9
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=100.00 E-value=2.7e-31 Score=244.56 Aligned_cols=242 Identities=58% Similarity=0.908 Sum_probs=199.8
Q ss_pred ccCHHHHHHHHHHHHHHHcCceecCCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCC
Q 022564 29 VVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLD 108 (295)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~i~L~~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~ 108 (295)
+++++++.++.++...+++.++|.+++++++|.|++++.+.+..+|..|+++.++|++....+.+++.+++.+++++|++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~ 81 (402)
T cd00378 2 DVDPEIAEIIKKENERQRETLELIASENFTSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAE 81 (402)
T ss_pred CcCHHHHHHHHHHHHHHHhCeeeeccCCcCCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCC
Confidence 57899999999988888899999999999999999999998877787788888889998899999988899999999998
Q ss_pred CCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHH
Q 022564 109 PEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLE 188 (295)
Q Consensus 109 ~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~ 188 (295)
.. .|++++|+.++..++.++++|||+|++++++|+++....... .+...|.++..++++.+.+++.+|+++++
T Consensus 82 ~~----~v~~~sgt~a~~~~l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~id~~~l~ 154 (402)
T cd00378 82 YA----NVQPHSGSQANLAVYFALLEPGDTIMGLDLSHGGHLTHGSFT---KVSASGKLFESVPYGVDPETGLIDYDALE 154 (402)
T ss_pred ce----eeecCCcHHHHHHHHHHhcCCCCEEEEecCccCccccccccc---cccccceeEEEecCCcCcccCCcCHHHHH
Confidence 64 677788877888899999999999999999998886644321 12345655555665444336899999999
Q ss_pred HHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCceEEE
Q 022564 189 KSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMI 268 (295)
Q Consensus 189 ~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~gG~l 268 (295)
+++.+.++++++++.+++|...|+++|.++|++||+++++|++|+.|.+..+....++.++|++++|+||+|+||+||++
T Consensus 155 ~~i~~~~~~~v~~~~~~~~~~~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~~~dv~~~s~sK~l~G~~gg~i 234 (402)
T cd00378 155 KMALEFKPKLIVAGASAYPRPIDFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLPGADVVTTTTHKTLRGPRGGLI 234 (402)
T ss_pred HHHHhCCCCEEEecCcccCCCcCHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCcccCCcEEEeccccCCCCCCceEE
Confidence 99965589999998778888889999999999999999999999888765443333333689999999999999999988
Q ss_pred EEeC-Cchhh
Q 022564 269 FFRK-GVKEI 277 (295)
Q Consensus 269 ~~~~-~~~~~ 277 (295)
++++ ++.+.
T Consensus 235 ~~~~~~~~~~ 244 (402)
T cd00378 235 LTRKGELAKK 244 (402)
T ss_pred EeccHHHHHH
Confidence 8877 65443
No 10
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=100.00 E-value=3.1e-31 Score=245.19 Aligned_cols=244 Identities=55% Similarity=0.840 Sum_probs=197.5
Q ss_pred CcccccCHHHHHHHHHHHHHHHcCceecCCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHH
Q 022564 25 APLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEA 104 (295)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~ 104 (295)
..|.+.+|.+++.+.++...++..++|.++++++++.|++++...+.++|..++++++++.+....+.+++.+++.++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~ 83 (416)
T PRK00011 4 DNLAEYDPEIADAIEQELKRQEEHIELIASENFVSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKEL 83 (416)
T ss_pred hhhhhcCHHHHHHHHHHHHHHhcCeeeecccCcCCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHHH
Confidence 56688999999999998888889999999999999999999988877667778888877777777788887788999999
Q ss_pred cCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCH
Q 022564 105 FRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDY 184 (295)
Q Consensus 105 ~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~ 184 (295)
+|++.+ .|++++|+.++..++.+++++||+|+++.++|++++....... ....|. +.+.++++.+++.+|+
T Consensus 84 ~g~~~~----~i~~~sgt~al~~~l~~l~~~gd~Vl~~~~~~~~~~~~~~~~~---~~~~g~--~~~~~~~~~~~~~~d~ 154 (416)
T PRK00011 84 FGAEYA----NVQPHSGSQANAAVYFALLKPGDTILGMDLAHGGHLTHGSPVN---FSGKLY--NVVSYGVDEETGLIDY 154 (416)
T ss_pred hCCCce----eeecCCchHHHHHHHHHhcCCCCEEEEeccccCCccccccccc---ccccee--eEeecCcCcccCCcCH
Confidence 999874 6888888778777888999999999999999988765443211 011233 3344445544688999
Q ss_pred HHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCc
Q 022564 185 DQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPR 264 (295)
Q Consensus 185 e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~ 264 (295)
+++++++++.+|++++++.+++|...|+++|.++|+++|+++|+|++|+.|....+..+..+.++|++++|+||+|+||+
T Consensus 155 ~~l~~~i~~~~~k~v~~~~~~~~~~~~~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~~~di~~~S~~K~l~g~~ 234 (416)
T PRK00011 155 DEVEKLALEHKPKLIIAGASAYSRPIDFKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVPHADVVTTTTHKTLRGPR 234 (416)
T ss_pred HHHHHHHHhcCCCEEEECCCcCCCccCHHHHHHHHHHcCCEEEEECcchhcccccCccCCCCCCCcEEEecCCcCCCCCC
Confidence 99999997557999999877788778999999999999999999999998876544333333468999999999999999
Q ss_pred eEEEEEeC-Cchhh
Q 022564 265 GAMIFFRK-GVKEI 277 (295)
Q Consensus 265 gG~l~~~~-~~~~~ 277 (295)
||++++++ ++.+.
T Consensus 235 gg~i~~~~~~~~~~ 248 (416)
T PRK00011 235 GGLILTNDEELAKK 248 (416)
T ss_pred ceEEEeCCHHHHHH
Confidence 99999964 55443
No 11
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=1.9e-30 Score=236.65 Aligned_cols=222 Identities=22% Similarity=0.247 Sum_probs=178.0
Q ss_pred ceecCC-CCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCC-CCcceeEEeCCChH-HH
Q 022564 49 LELIPS-ENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDP-EKWGVNVQSLSGSP-SN 125 (295)
Q Consensus 49 i~L~~~-~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~-~~~~~~v~~~sG~~-a~ 125 (295)
+.|+.. ....|..|.+++.+++.+.+ ++..+..+.......+..+++|+.+++++|+++ + +|+||.|++ ++
T Consensus 24 vylD~aa~~~~p~~V~~a~~~~~~~~~--an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~~----eIvft~~tT~al 97 (405)
T COG0520 24 VYLDNAATSQKPQAVLDAVAEYYRRYN--ANVHRGAHTLAEEATDLYEAAREAVARFLNADSSD----EIVFTRGTTEAL 97 (405)
T ss_pred EEecCcccccCCHHHHHHHHHHHHhhc--CCcCcccchHHHHHHHHHHHHHHHHHHHhCCCCCC----eEEEeCChhHHH
Confidence 445433 33469999999999886533 333322233334556788889999999999985 5 899999999 76
Q ss_pred HHHHHhh---cCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEc
Q 022564 126 FQVYTAL---LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 202 (295)
Q Consensus 126 ~~~~~al---~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~ 202 (295)
..+..++ +.+||+|++.+.+|+++..|+..+.+ ..|.+++.+| ++ +++.+|.|++++.+++ +||+|.++
T Consensus 98 n~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~----~~Ga~v~~i~--~~-~~g~~~~~~~~~~i~~-~Tklvais 169 (405)
T COG0520 98 NLVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAK----RTGAKVRVIP--LD-DDGLLDLDALEKLITP-KTKLVALS 169 (405)
T ss_pred HHHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHH----hcCcEEEEEe--cC-CCCCcCHHHHHHhcCC-CceEEEEE
Confidence 6677877 69999999999999999998875543 3465566666 44 6789999999998887 99999997
Q ss_pred -CCCC-CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCce-EEEEEeCCchhhhc
Q 022564 203 -ASAY-ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINK 279 (295)
Q Consensus 203 -~~n~-~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~~~ 279 (295)
.+|. |...|+++|+++||++|+++++|++|++|+.+.++...+ +|++++|+||||+||.| |+|++|+++.+..
T Consensus 170 ~vSn~tG~~~pv~~I~~la~~~ga~v~VDaaq~~~h~~idv~~l~---~Df~afsgHKwl~gP~GiGvLy~r~~~l~~l- 245 (405)
T COG0520 170 HVSNVTGTVNPVKEIAELAHEHGALVLVDAAQAAGHLPIDVQELG---CDFLAFSGHKWLLGPTGIGVLYVRKELLEEL- 245 (405)
T ss_pred CccccccccchHHHHHHHHHHcCCEEEEECccccCccCCCchhcC---CCEEEEcccccccCCCceEEEEEchHHHhhc-
Confidence 5555 699999999999999999999999999999999998877 99999999999999999 9999999987543
Q ss_pred cCCeeEEEeEE
Q 022564 280 QGKEFTCRCFM 290 (295)
Q Consensus 280 ~~~~~~~~~~~ 290 (295)
.+..+.+.|
T Consensus 246 --~P~~~gg~~ 254 (405)
T COG0520 246 --EPFLGGGGM 254 (405)
T ss_pred --CCcccCCCc
Confidence 444444443
No 12
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.96 E-value=4.6e-28 Score=214.36 Aligned_cols=201 Identities=19% Similarity=0.315 Sum_probs=167.5
Q ss_pred CCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhh-
Q 022564 55 ENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTAL- 132 (295)
Q Consensus 55 ~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al- 132 (295)
..++.|+|.++|..++...| |+|++.+.-|.. ..++.+++|+.+++++|++++ +|+||||++ ++.+++.+.
T Consensus 10 TTp~~~~v~~~m~~~~~~~f--gNPsS~H~~G~~-A~~~ve~AR~~iA~llga~~~----eIiFTSG~TEsnNlaI~g~~ 82 (386)
T COG1104 10 TTPVDPEVLEAMLPYLTEVF--GNPSSLHSFGRE-ARKAVEEAREQIAKLLGADPE----EIIFTSGATESNNLAIKGAA 82 (386)
T ss_pred cCCCCHHHHHHHHHHHHhhc--CCccchhHhHHH-HHHHHHHHHHHHHHHhCCCCC----eEEEecCCcHHHHHHHHhhH
Confidence 44678999999999998866 888875544433 455666799999999999986 899999999 766666662
Q ss_pred -c----CCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCC-
Q 022564 133 -L----KPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY- 206 (295)
Q Consensus 133 -~----~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~- 206 (295)
. +.|.+|+++..+|++++.++..+.. .|.++.+++ ++ .++.+|+++|++++++ +|.+|.+...||
T Consensus 83 ~a~~~~~~~~HIIts~iEH~aVl~~~~~Le~-----~g~~Vtyl~--V~-~~G~v~~e~L~~al~~-~T~LVSim~aNnE 153 (386)
T COG1104 83 LAYRNAQKGKHIITSAIEHPAVLNTCRYLER-----QGFEVTYLP--VD-SNGLVDLEQLEEALRP-DTILVSIMHANNE 153 (386)
T ss_pred HhhhcccCCCeEEEcccccHHHHHHHHHHHh-----cCCeEEEeC--CC-CCCeEcHHHHHHhcCC-CceEEEEEecccC
Confidence 2 2578999999999999988775532 344455565 55 5799999999999997 898888876666
Q ss_pred -CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCce-EEEEEeCCch
Q 022564 207 -ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVK 275 (295)
Q Consensus 207 -~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~ 275 (295)
|.++|+++|+++|+++++++++|++|++|.++.++...+ +|++++|+|| |+||+| |+||+|+...
T Consensus 154 ~G~IQpI~ei~~i~k~~~i~fHvDAvQa~Gkipi~~~~~~---vD~ls~SaHK-~~GpkGiGaLyv~~~~~ 220 (386)
T COG1104 154 TGTIQPIAEIGEICKERGILFHVDAVQAVGKIPIDLEELG---VDLLSFSAHK-FGGPKGIGALYVRPGVR 220 (386)
T ss_pred eeecccHHHHHHHHHHcCCeEEEehhhhcCceeccccccC---cceEEeehhh-ccCCCceEEEEECCCCc
Confidence 799999999999999999999999999999999988877 9999999999 899999 9999988754
No 13
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.94 E-value=2.4e-26 Score=204.25 Aligned_cols=205 Identities=20% Similarity=0.295 Sum_probs=167.0
Q ss_pred cCceecCC-CCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-H
Q 022564 47 KGLELIPS-ENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-S 124 (295)
Q Consensus 47 ~~i~L~~~-~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a 124 (295)
+.+.|+.+ ..+.++.|.++|.+++.+.+ ++|.+..|+ .... ...+++|+.+|+++|+++. +|+||+|+| +
T Consensus 43 ~~vyld~~at~p~~~~Vldam~~~~~~~~--~nPh~~~y~-w~~~-~~~E~aR~~VAklInAd~~----dIiFts~ATEs 114 (428)
T KOG1549|consen 43 RPVYLDNQATGPMDPRVLDAMLPYLLEYL--GNPHSRSYG-WKAE-DAVEAAREQVAKLINADPS----DIVFTSGATES 114 (428)
T ss_pred ccEEEecCcCCCCCHHHHHHHHHHHHHhh--cCCCccccc-hhhh-HHHHHHHHHHHHHhCCCCC----cEEEeCCchHH
Confidence 45667544 44679999999999988755 777765232 2222 2244689999999999997 799999999 7
Q ss_pred HHHHHHhh-cCCCC----eEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEE
Q 022564 125 NFQVYTAL-LKPHD----RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLI 199 (295)
Q Consensus 125 ~~~~~~al-~~~gd----~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i 199 (295)
+..++..+ ...+| +|++.+.+|+.+...+..+..++ ..+..+| ++ +++.+|.+.+++.+++ +|+++
T Consensus 115 ~Nlvl~~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g-----~~Vt~lp--v~-~~~~~d~~~~~~~i~~-~T~lv 185 (428)
T KOG1549|consen 115 NNLVLKGVARFFGDKTKKHIITLQTEHPCVLDSCRALQEEG-----LEVTYLP--VE-DSGLVDISKLREAIRS-KTRLV 185 (428)
T ss_pred HHHHHHHhhccccccccceEEEecccCcchhHHHHHHHhcC-----eEEEEec--cC-ccccccHHHHHHhcCC-CceEE
Confidence 77688887 56777 99999999999988777655443 3455565 44 5789999999999998 99999
Q ss_pred EEcCC-C-CCCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCce-EEEEEeC
Q 022564 200 VAGAS-A-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRK 272 (295)
Q Consensus 200 ~l~~~-n-~~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~ 272 (295)
.+... | .+..+|++||.++|+++++.+++|+||+.|.++.|+.... +|++++|+|||+ ||+| |+||+|+
T Consensus 186 ~I~~Vnn~~gv~~Pv~EI~~icr~~~v~v~~DaAQavG~i~vDV~eln---~D~~s~s~HK~y-gp~~iGaLYvr~ 257 (428)
T KOG1549|consen 186 SIMHVNNEIGVLQPVKEIVKICREEGVQVHVDAAQAVGKIPVDVQELN---ADFLSISAHKIY-GPPGIGALYVRR 257 (428)
T ss_pred EEEecccCccccccHHHHHHHhCcCCcEEEeehhhhcCCccccHHHcC---chheeeeccccc-CCCcceEEEEcc
Confidence 99633 3 3699999999999999999999999999999999999888 999999999976 7787 9999997
No 14
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.93 E-value=2.8e-25 Score=202.47 Aligned_cols=210 Identities=19% Similarity=0.241 Sum_probs=164.8
Q ss_pred cCCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHH
Q 022564 52 IPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYT 130 (295)
Q Consensus 52 ~~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~ 130 (295)
.++..++|+.|++++.+.+.+.+ +++.+..+.......++.+++++.+++++|++++. +|++++|++ ++..++.
T Consensus 5 ~~~~~~~p~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~~---~v~~~~~~t~a~~~~~~ 79 (371)
T PF00266_consen 5 NAGTGPMPKSVLEAISDYLRNFY--ANPHSGVSHRSREFAEILEEAREALAKLLGAPPDE---EVVFTSNGTEALNAVAS 79 (371)
T ss_dssp TSSS-B-BHHHHHHHHHHHHHSG--SSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTTE---EEEEESSHHHHHHHHHH
T ss_pred CCCccCCCHHHHHHHHHHHHHhh--hcCcccccchhhhhhHHHHHHHHHHHHhcCCcccc---ccccccccchhhhhhhh
Confidence 35666889999999999987644 33322222333455677778999999999998832 899999999 8777888
Q ss_pred hh---cCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEc--CCC
Q 022564 131 AL---LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG--ASA 205 (295)
Q Consensus 131 al---~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~--~~n 205 (295)
++ +++||+|++.+.+|++...++.... +..|.++..++. + .++.+|++++++.+++ ++++++++ .+.
T Consensus 80 ~l~~~~~~g~~vl~~~~~~~s~~~~~~~~~----~~~g~~v~~i~~--~-~~~~~~~~~~~~~l~~-~~~lv~~~~~~~~ 151 (371)
T PF00266_consen 80 SLLNPLKPGDEVLVTSNEHPSNRYPWEEIA----KRKGAEVRVIPA--D-PGGSLDLEDLEEALNP-DTRLVSISHVENS 151 (371)
T ss_dssp HHHHHGTTTCEEEEEESSHHHHHHHHHHHH----HHTTEEEEEEEE--G-TTSSCSHHHHHHHHHT-TESEEEEESBETT
T ss_pred cccccccccccccccccccccccccccccc----ccchhhhccccc--c-ccchhhhhhhhhhhcc-ccceEEeeccccc
Confidence 88 7999999999999999875555332 234555666654 3 4578999999999986 99999986 444
Q ss_pred CCCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCce-EEEEEeCCchhhh
Q 022564 206 YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEIN 278 (295)
Q Consensus 206 ~~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~~ 278 (295)
.|...|+++|.++||++|+++++|++|++|.++.++...+ +|++++|+|| |+||+| |+++++++..+..
T Consensus 152 tG~~~pi~~I~~~~~~~~~~~~vD~~~~~g~~~id~~~~~---~D~~~~s~~K-l~gp~G~g~l~v~~~~~~~~ 221 (371)
T PF00266_consen 152 TGVRNPIEEIAKLAHEYGALLVVDAAQSAGCVPIDLDELG---ADFLVFSSHK-LGGPPGLGFLYVRPEAIERL 221 (371)
T ss_dssp TTBBSSHHHHHHHHHHTTSEEEEE-TTTTTTSS--TTTTT---ESEEEEESTS-TTSSSTEEEEEEEHHHHHHH
T ss_pred ccEEeeeceehhhhhccCCceeEechhccccccccccccc---cceeeecccc-cCCCCchhhheehhhhhhcc
Confidence 5799999999999999999999999999999999988776 9999999999 999999 9999999865543
No 15
>PLN02651 cysteine desulfurase
Probab=99.93 E-value=3e-25 Score=201.80 Aligned_cols=205 Identities=18% Similarity=0.258 Sum_probs=156.3
Q ss_pred CCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHh
Q 022564 53 PSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTA 131 (295)
Q Consensus 53 ~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~a 131 (295)
++..++++.+++++.+.+.+.+ ++|....+.......++.+.+++.+++++|++++ +|++++|++ ++..++.+
T Consensus 6 a~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~----~v~~t~~~t~a~~~~l~~ 79 (364)
T PLN02651 6 QATTPIDPRVLDAMLPFLIEHF--GNPHSRTHLYGWESEDAVEKARAQVAALIGADPK----EIIFTSGATESNNLAIKG 79 (364)
T ss_pred cCCCCCCHHHHHHHHHHHHhCC--CCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCC----eEEEeCCHHHHHHHHHHH
Confidence 4555789999999999886544 4443211111123355666788999999999876 799999988 65545544
Q ss_pred h----cCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCC-
Q 022564 132 L----LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY- 206 (295)
Q Consensus 132 l----~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~- 206 (295)
+ .++||+|++...+|+++..++..+ ...|.+++.++ .+ +++.+|++++++++++ ++++++++.+++
T Consensus 80 ~~~~~~~~g~~vl~~~~~h~s~~~~~~~~-----~~~g~~v~~v~--~~-~~~~~d~~~l~~~i~~-~t~lv~v~~~~n~ 150 (364)
T PLN02651 80 VMHFYKDKKKHVITTQTEHKCVLDSCRHL-----QQEGFEVTYLP--VK-SDGLVDLDELAAAIRP-DTALVSVMAVNNE 150 (364)
T ss_pred HHHhccCCCCEEEEcccccHHHHHHHHHH-----HhcCCEEEEEc--cC-CCCcCCHHHHHHhcCC-CcEEEEEECCCCC
Confidence 3 578999999999998875544322 12354454554 44 4578999999999987 899998874333
Q ss_pred -CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCce-EEEEEeCCchh
Q 022564 207 -ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKE 276 (295)
Q Consensus 207 -~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~ 276 (295)
|...|+++|.++|+++|+++++|++|++|.++.++..++ +|++++|+||| +||.| |+++++++...
T Consensus 151 tG~~~~l~~I~~~~~~~g~~~~vD~a~~~g~~~~~~~~~~---~D~~~~s~hK~-~gp~G~g~l~v~~~~~~ 218 (364)
T PLN02651 151 IGVIQPVEEIGELCREKKVLFHTDAAQAVGKIPVDVDDLG---VDLMSISGHKI-YGPKGVGALYVRRRPRV 218 (364)
T ss_pred ceecccHHHHHHHHHHcCCEEEEEcchhhCCcccCcccCC---CCEEEechhhh-CCCCceEEEEEcCCCCC
Confidence 588999999999999999999999999999988877766 99999999997 79999 99999997543
No 16
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.93 E-value=1.1e-24 Score=200.58 Aligned_cols=211 Identities=18% Similarity=0.231 Sum_probs=160.6
Q ss_pred Cceec-CCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCC-CCCCcceeEEeCCChH-H
Q 022564 48 GLELI-PSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL-DPEKWGVNVQSLSGSP-S 124 (295)
Q Consensus 48 ~i~L~-~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~-~~~~~~~~v~~~sG~~-a 124 (295)
.+.|+ ++.+++|+.+.+++.+++.+.+ +++.+..+.......+..+.+|+.+++++|+ +++ +|++++|++ +
T Consensus 20 ~~yld~a~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~----~i~~~~~~t~~ 93 (401)
T PRK10874 20 GVYLDSAATALKPQAVIEATQQFYSLSA--GNVHRSQFAAAQRLTARYEAAREQVAQLLNAPDAK----NIVWTRGTTES 93 (401)
T ss_pred eEEEeCCcccCCCHHHHHHHHHHHHhcc--CCCCCcccHHHHHHHHHHHHHHHHHHHHcCCCCCC----EEEEECCHHHH
Confidence 46665 4455788999999999887633 3333211111233455666788999999999 665 899999999 7
Q ss_pred HHHHHHhh----cCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEE
Q 022564 125 NFQVYTAL----LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIV 200 (295)
Q Consensus 125 ~~~~~~al----~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~ 200 (295)
+..++.++ +++||+|++++++|++.+.++... ++..|.+++.++ .+ .++.+|++++++.+++ +|++|+
T Consensus 94 i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~----~~~~g~~v~~v~--~~-~~~~~d~~~l~~~i~~-~t~lv~ 165 (401)
T PRK10874 94 INLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMV----AQQTGAKVVKLP--LG-ADRLPDVDLLPELITP-RTRILA 165 (401)
T ss_pred HHHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHH----HHHhCCEEEEEe--cC-CCCcCCHHHHHHhcCc-CcEEEE
Confidence 77677776 479999999999998865444321 234565565555 44 4578999999999977 899999
Q ss_pred EcCCCC--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCce-EEEEEeCCchh
Q 022564 201 AGASAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKE 276 (295)
Q Consensus 201 l~~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~ 276 (295)
++.+++ |...|+++|.++|+++|+++++|++|+.|.++.++...+ +|++++|+|| +.||.| |++++++++.+
T Consensus 166 i~~~~n~tG~~~~~~~i~~l~~~~g~~~ivD~a~~~g~~~~~~~~~~---~d~~~~s~~K-~~gp~G~G~l~~~~~~~~ 240 (401)
T PRK10874 166 LGQMSNVTGGCPDLARAITLAHQAGMVVMVDGAQGAVHFPADVQALD---IDFYAFSGHK-LYGPTGIGVLYGKSELLE 240 (401)
T ss_pred EeCCcccccCcCCHHHHHHHHHHcCCEEEEECCcccccccCCchhcC---CCEEEEeccc-ccCCCccEEEEEchHHHh
Confidence 985554 588899999999999999999999999888876665444 9999999999 558999 99999988654
No 17
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.93 E-value=2.6e-24 Score=196.42 Aligned_cols=210 Identities=19% Similarity=0.222 Sum_probs=162.7
Q ss_pred cCceecCCCC--CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCC--CCCCcceeEEeCCCh
Q 022564 47 KGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWGVNVQSLSGS 122 (295)
Q Consensus 47 ~~i~L~~~~~--~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~--~~~~~~~~v~~~sG~ 122 (295)
+.|+|+.|++ .+|+.+++++.+++.+.. . +|....+..+|++++.+++.+.+|+ ++++ +|++|+|+
T Consensus 29 ~vi~l~iG~Pd~~~p~~i~~a~~~a~~~~~----~---~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~---eiivt~Ga 98 (393)
T COG0436 29 DVIDLSIGEPDFPTPEHIIEAAIEALEEGG----T---HYTPSAGIPELREAIAEKYKRRYGLDVDPEE---EIIVTAGA 98 (393)
T ss_pred CEEEeCCCCCCCCCCHHHHHHHHHHHhccc----C---CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC---eEEEeCCH
Confidence 4799999988 578899999999887621 0 2336678899999999999999885 5542 59999999
Q ss_pred H-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEE
Q 022564 123 P-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA 201 (295)
Q Consensus 123 ~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l 201 (295)
+ ++..++.++++|||+|++++ |.|..|...+.+.|++...+++....+++.+|+++|++++++ +||+|++
T Consensus 99 ~~al~~~~~a~~~pGDeVlip~--------P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~-ktk~i~l 169 (393)
T COG0436 99 KEALFLAFLALLNPGDEVLIPD--------PGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAITP-KTKAIIL 169 (393)
T ss_pred HHHHHHHHHHhcCCCCEEEEeC--------CCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcCc-cceEEEE
Confidence 9 88889999999999999999 555555556678887776665422213789999999999998 9999999
Q ss_pred cCCCCC-----CccCHHHHHHHHHHcCCEEEEEccccccccccC-CCCCCCC--c---ceEEEeCCCCCC--CCCceEEE
Q 022564 202 GASAYA-----RLYDYERIRKVCNKQKAIMLADMAHISGLVAAG-VIPSPFE--Y---ADVVTTTTHKSL--RGPRGAMI 268 (295)
Q Consensus 202 ~~~n~~-----~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~-~~~~~~~--~---~D~~~~s~~K~l--~gp~gG~l 268 (295)
++|||| ....+++|+++|++||++||+|+++ .+.+..+ .....+. . .-+.+.|++|++ .|++-|++
T Consensus 170 n~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY-~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRvG~~ 248 (393)
T COG0436 170 NSPNNPTGAVYSKEELKAIVELAREHDIIIISDEIY-EELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRIGWV 248 (393)
T ss_pred eCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehhh-hhcccCCCCcCCHhhcCCCcceEEEEecccccccccccceeEe
Confidence 977775 4557889999999999999999995 4444443 2332222 2 237788999977 47788999
Q ss_pred EEe-CCchh
Q 022564 269 FFR-KGVKE 276 (295)
Q Consensus 269 ~~~-~~~~~ 276 (295)
+++ +++.+
T Consensus 249 v~~~~~l~~ 257 (393)
T COG0436 249 VGPPEELIA 257 (393)
T ss_pred ecChHHHHH
Confidence 999 54443
No 18
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.93 E-value=1.8e-24 Score=190.15 Aligned_cols=232 Identities=16% Similarity=0.132 Sum_probs=172.7
Q ss_pred cCcccccCHHHHHHHHHHHHHHHcCce-ecCCCC--CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHH
Q 022564 24 NAPLEVVDPEIADIIEHEKARQWKGLE-LIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKR 100 (295)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~i~-L~~~~~--~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~ 100 (295)
++.++...+++|..+.+.. .+....+ |..|.+ ++|+.|.+++.+++.+.. ...|....+.+++++++++.
T Consensus 9 ~~~l~~~~~~vw~e~~~la-~e~~~~~~LgqGfp~~~~P~fv~ea~~~~~~~~~------~~qYt~~~G~p~L~~aL~k~ 81 (420)
T KOG0257|consen 9 NRNLSTSKPYVWTEINRLA-AEHKVPNPLGQGFPDFPPPKFVTEAAKNAAKEPS------TNQYTRGYGLPQLRKALAKA 81 (420)
T ss_pred cccccccCCcHHHHHHHHH-HhcCCCCcccCCCCCCCCcHHHHHHHHHHhccch------hccccccCCchHHHHHHHHH
Confidence 5677778889999888853 4445555 877765 468889999988876631 11133334567888888899
Q ss_pred HHHHcCC--CCCCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeee---
Q 022564 101 ALEAFRL--DPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYR--- 174 (295)
Q Consensus 101 la~~~g~--~~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--- 174 (295)
++.++|. +++. +|++|+|+. ++..++++++++||+|++.+| .|..|...+.++|...+.++..
T Consensus 82 ~se~~~~~~~~~~---eVlVT~GA~~ai~~~~~~l~~~GDeVii~eP--------~fd~Y~~~~~maG~tpv~v~~~~~~ 150 (420)
T KOG0257|consen 82 YSEFYGGLLDPDD---EVLVTAGANEAISSALLGLLNPGDEVIVFEP--------FFDCYIPQVVMAGGTPVFVPLKPKE 150 (420)
T ss_pred HHHHhccccCCcc---cEEEecCchHHHHHHHHHHcCCCCEEEEecC--------cchhhhhHHhhcCCcceeecccccc
Confidence 9998886 4443 899999999 888899999999999999994 4444444666888887777654
Q ss_pred --cCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC-----CccCHHHHHHHHHHcCCEEEEEccccccccccCCCC----
Q 022564 175 --LNESTGYIDYDQLEKSATLFRPKLIVAGASAYA-----RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIP---- 243 (295)
Q Consensus 175 --~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~~-----~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~---- 243 (295)
...+++.+|.++++.++++ +||+|++|.|||| ....|++|++||++||++||+|+++..-......+.
T Consensus 151 g~~~s~~~~~D~~~le~~~t~-kTk~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~as 229 (420)
T KOG0257|consen 151 GNVSSSDWTLDPEELESKITE-KTKAIILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIAS 229 (420)
T ss_pred ccccCccccCChHHHHhhccC-CccEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeec
Confidence 1135789999999999998 9999999977775 567899999999999999999999654333332111
Q ss_pred CC-CCcceEEEeCCCCCCC--CCceEEEEEeCCc
Q 022564 244 SP-FEYADVVTTTTHKSLR--GPRGAMIFFRKGV 274 (295)
Q Consensus 244 ~~-~~~~D~~~~s~~K~l~--gp~gG~l~~~~~~ 274 (295)
.| ....-+.++|+.|+|+ |++-|++++.+.+
T Consensus 230 lPgm~ertitvgS~gKtf~~TGWrlGW~igp~~L 263 (420)
T KOG0257|consen 230 LPGMYERTITVGSFGKTFGVTGWRLGWAIGPKHL 263 (420)
T ss_pred CCchhheEEEeccccceeeeeeeeeeeeechHHh
Confidence 11 1135688999999884 7777999995443
No 19
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.92 E-value=1.5e-24 Score=199.98 Aligned_cols=211 Identities=15% Similarity=0.153 Sum_probs=159.3
Q ss_pred Cceec-CCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCC-CCCCcceeEEeCCChH-H
Q 022564 48 GLELI-PSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL-DPEKWGVNVQSLSGSP-S 124 (295)
Q Consensus 48 ~i~L~-~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~-~~~~~~~~v~~~sG~~-a 124 (295)
.+.|+ ++..++|+.|++++.+++...+ +++....+.......+..+.+|+.+++++|+ +++ +|++|+|++ +
T Consensus 24 ~iYld~a~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~----~v~~t~g~t~~ 97 (406)
T PRK09295 24 LAYLDSAASAQKPSQVIDAEAEFYRHGY--AAVHRGIHTLSAQATEKMENVRKQAALFINARSAE----ELVFVRGTTEG 97 (406)
T ss_pred eEEEeCcccccCCHHHHHHHHHHHHhcC--CCCCCcccHHHHHHHHHHHHHHHHHHHHcCcCCCC----eEEEeCCHHHH
Confidence 36665 4455789999999999886533 2222111111123445556688999999998 565 899999999 7
Q ss_pred HHHHHHh----hcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEE
Q 022564 125 NFQVYTA----LLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIV 200 (295)
Q Consensus 125 ~~~~~~a----l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~ 200 (295)
+..++.+ ++++||+|++++++|++.+.++... +...|.++..++ .+ .++.+|++++++++++ +|++|+
T Consensus 98 l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~----~~~~g~~v~~v~--~~-~~~~~d~~~l~~~i~~-~t~lv~ 169 (406)
T PRK09295 98 INLVANSWGNSNVRAGDNIIISEMEHHANIVPWQML----CARVGAELRVIP--LN-PDGTLQLETLPALFDE-RTRLLA 169 (406)
T ss_pred HHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHH----HHHcCcEEEEEe--cC-CCCCCCHHHHHHhcCC-CcEEEE
Confidence 6656665 4689999999999998876554422 223455555555 44 4578999999999977 899999
Q ss_pred EcCCCC--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCce-EEEEEeCCchh
Q 022564 201 AGASAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKE 276 (295)
Q Consensus 201 l~~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~ 276 (295)
++.++| |...|+++|.++|+++|+++++|++|+.|..+.++...+ +|++++|+|| +.||.| |++++++++.+
T Consensus 170 l~~~~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~~~~~~~~---~D~~~~s~~K-~~gp~G~G~l~~~~~~~~ 244 (406)
T PRK09295 170 ITHVSNVLGTENPLAEMIALAHQHGAKVLVDGAQAVMHHPVDVQALD---CDFYVFSGHK-LYGPTGIGILYVKEALLQ 244 (406)
T ss_pred EecchhcccccCCHHHHHHHHHHcCCEEEEEcccccCccccCchhcC---CCEEEeehhh-ccCCCCcEEEEEchHhHh
Confidence 984444 588999999999999999999999999998887765555 9999999999 668999 99999988654
No 20
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.92 E-value=3e-24 Score=197.50 Aligned_cols=211 Identities=18% Similarity=0.176 Sum_probs=158.2
Q ss_pred Cceec-CCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCC-CCCcceeEEeCCChH-H
Q 022564 48 GLELI-PSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLD-PEKWGVNVQSLSGSP-S 124 (295)
Q Consensus 48 ~i~L~-~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~-~~~~~~~v~~~sG~~-a 124 (295)
.+.|+ ++.+++|+.+++++.+++...+ +++....+.......+..+.+|+.+++++|++ ++ +|++|+|++ +
T Consensus 17 ~iyld~a~~~~~p~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~----~i~~t~g~t~~ 90 (398)
T TIGR03392 17 TVYLDSAATALKPQAVIDATQQFYRLSS--GTVHRSQHQQAQSLTARYELARQQVARFLNAPDAE----NIVWTRGTTES 90 (398)
T ss_pred eEEeeCccccCCCHHHHHHHHHHHHhcC--CCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCC----eEEEeCChHHH
Confidence 46665 4455789999999999886533 33322112122234455667889999999995 55 899999999 7
Q ss_pred HHHHHHhh----cCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEE
Q 022564 125 NFQVYTAL----LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIV 200 (295)
Q Consensus 125 ~~~~~~al----~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~ 200 (295)
+..++.++ +++||+|++++++|++.+.++.. .+...|.+++.++ .+ .++.+|++++++++++ +|++++
T Consensus 91 l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~----~~~~~g~~v~~v~--~~-~~~~~~~~~l~~~i~~-~t~lv~ 162 (398)
T TIGR03392 91 INLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLM----VAQQTGAKVVKLP--IG-ADLLPDIRQLPELLTP-RTRILA 162 (398)
T ss_pred HHHHHHHhhhccCCCCCEEEECCcchhHHHHHHHH----HHHHcCcEEEEEe--cC-CCCCcCHHHHHHHhcc-CceEEE
Confidence 77677776 58999999999999886443321 1234565555555 44 4578999999999987 899999
Q ss_pred EcCCCC--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCce-EEEEEeCCchh
Q 022564 201 AGASAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKE 276 (295)
Q Consensus 201 l~~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~ 276 (295)
++.++| |...|+++|.++|+++|+++++|++|+.|..+.++.... +|++++|+|| +.||.| |++++++++.+
T Consensus 163 i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~---~d~~~~s~~K-~~gp~G~G~l~~~~~~~~ 237 (398)
T TIGR03392 163 LGQMSNVTGGCPDLARAITLAHQYGAVVVVDGAQGVVHGPPDVQALD---IDFYAFSGHK-LYGPTGIGVLYGKTELLE 237 (398)
T ss_pred EECccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCCCCChhhcC---CCEEEEeccc-ccCCCceEEEEEcHHHHh
Confidence 874444 588999999999999999999999999888776655444 9999999999 557988 99999987654
No 21
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.92 E-value=6.5e-24 Score=193.71 Aligned_cols=202 Identities=17% Similarity=0.255 Sum_probs=151.4
Q ss_pred CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhhcCC
Q 022564 57 FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKP 135 (295)
Q Consensus 57 ~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al~~~ 135 (295)
++|+.+++++.+.+.+.. +.++...|..........+.+++.+++++|++..+ +|++++|++ ++..++.+++++
T Consensus 11 ~~p~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~---~v~~~~g~t~al~~~~~~~~~~ 85 (376)
T TIGR01977 11 PKPDEVYEAMADFYKNYG--GSPGRGRYRLALRASREVEETRQLLAKLFNAPSSA---HVVFTNNATTALNIALKGLLKE 85 (376)
T ss_pred CCCHHHHHHHHHHHHhcC--CCCCcccchHHHHHHHHHHHHHHHHHHHhCcCCCC---eEEEeCCHHHHHHHHHHhccCC
Confidence 467899999988876521 11211111111112344556779999999986432 799998888 777788888999
Q ss_pred CCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCC--CCccCHH
Q 022564 136 HDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY--ARLYDYE 213 (295)
Q Consensus 136 gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~--~~~~~l~ 213 (295)
||+|++..++|+++..+.... +...|.++..++ .+ .++.+|++++++++++ ++++++++.+++ |...|++
T Consensus 86 gd~vl~~~~~~~~~~~~~~~~----~~~~g~~~~~v~--~~-~~~~~d~~~l~~~~~~-~~~~v~~~~~~n~tG~~~~~~ 157 (376)
T TIGR01977 86 GDHVITTPMEHNSVARPLECL----KEQIGVEITIVK--CD-NEGLISPERIKRAIKT-NTKLIVVSHASNVTGTILPIE 157 (376)
T ss_pred CCEEEECcchhhHHHHHHHHH----HHHcCcEEEEEe--cC-CCCCcCHHHHHHhcCC-CCeEEEEECCCCCccccCCHH
Confidence 999999998888775433211 122354454444 44 4578999999999976 899999874444 5888999
Q ss_pred HHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCce-EEEEEeCCc
Q 022564 214 RIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGV 274 (295)
Q Consensus 214 ~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~~ 274 (295)
+|.++|+++|+++++|++|++|..+.+....+ +|++++|+|||++||.| |+++++++.
T Consensus 158 ~i~~l~~~~~~~livD~a~~~g~~~~~~~~~~---~D~~~~s~~K~l~~p~g~g~l~~~~~~ 216 (376)
T TIGR01977 158 EIGELAQENGIFFILDAAQTAGVIPIDMTELA---IDMLAFTGHKGLLGPQGTGGLYIREGI 216 (376)
T ss_pred HHHHHHHHcCCEEEEEhhhccCccCCCchhcC---CCEEEecccccccCCCCceEEEEcCCc
Confidence 99999999999999999999999887766555 99999999999999999 999888875
No 22
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.92 E-value=6.9e-24 Score=192.09 Aligned_cols=204 Identities=21% Similarity=0.259 Sum_probs=155.0
Q ss_pred CCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHh
Q 022564 53 PSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTA 131 (295)
Q Consensus 53 ~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~a 131 (295)
++..++++.+++++.+.+...+ ++++.+.+.......++.+.+++.+++++|++++ +|++++|++ ++..++.+
T Consensus 5 a~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~----~v~~~~g~t~a~~~~l~~ 78 (353)
T TIGR03235 5 NATTPIDPAVAEAMLPWLLEEF--GNPSSRTHEFGHNAKKAVERARKQVAEALGADTE----EVIFTSGATESNNLAILG 78 (353)
T ss_pred CCCCCCCHHHHHHHHHHHHhcC--CCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCC----eEEEeCCHHHHHHHHHHH
Confidence 4555789999999999886533 4444311111112234556788999999999886 899999988 77767777
Q ss_pred hc----CCC-CeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCC
Q 022564 132 LL----KPH-DRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY 206 (295)
Q Consensus 132 l~----~~g-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~ 206 (295)
+. .+| +.|++...+|+++..++... ...|.++..++ .+ +++.+|++++++.+++ ++++|+++.+++
T Consensus 79 l~~~~~~~g~~~vi~~~~~~~s~~~~~~~~-----~~~G~~v~~v~--~~-~~~~~d~~~l~~~l~~-~~~lv~~~~~~n 149 (353)
T TIGR03235 79 LARAGEQKGKKHIITSAIEHPAVLEPIRAL-----ERNGFTVTYLP--VD-ESGRIDVDELADAIRP-DTLLVSIMHVNN 149 (353)
T ss_pred HHHhcccCCCCeeeEcccccHHHHHHHHHH-----HhcCCEEEEEc--cC-CCCcCCHHHHHHhCCC-CCEEEEEEcccC
Confidence 65 356 78999998998886655322 12354454454 44 4578999999999976 899998874443
Q ss_pred --CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCce-EEEEEeCCch
Q 022564 207 --ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVK 275 (295)
Q Consensus 207 --~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~ 275 (295)
|...|+++|.++|+++|+++++|++|+.|..+.++.... +|++++|+||| +||.| |+++++++..
T Consensus 150 ~tG~~~~~~~I~~l~~~~~~~~ivD~a~~~g~~~~~~~~~~---~D~~~~s~~K~-~gp~g~g~l~~~~~~~ 217 (353)
T TIGR03235 150 ETGSIQPIREIAEVLEAHEAFFHVDAAQVVGKITVDLSADR---IDLISCSGHKI-YGPKGIGALVIRKRGK 217 (353)
T ss_pred CceeccCHHHHHHHHHHcCCEEEEEchhhcCCccccccccC---CCEEEeehhhc-CCCCceEEEEEccCcc
Confidence 588899999999999999999999999999988776555 99999999998 58998 9999998854
No 23
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.91 E-value=1.2e-23 Score=192.35 Aligned_cols=202 Identities=18% Similarity=0.295 Sum_probs=155.1
Q ss_pred CCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHh
Q 022564 53 PSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTA 131 (295)
Q Consensus 53 ~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~a 131 (295)
++..+++++|++++.+.+.+.+ +++...+. ......++.+++++.+++++|++++ +|++++|++ ++..++.+
T Consensus 6 aa~~~~~~~v~~a~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~r~~la~~~g~~~~----~i~~t~~~t~a~~~al~~ 78 (379)
T TIGR03402 6 NATTRVDPEVLEAMLPYFTEYF--GNPSSMHS-FGGEVGKAVEEAREQVAKLLGAEPD----EIIFTSGGTESDNTAIKS 78 (379)
T ss_pred cCCCCCCHHHHHHHHHHHHhcC--CCCCcccH-HHHHHHHHHHHHHHHHHHHhCCCCC----eEEEeCcHHHHHHHHHHH
Confidence 4566789999999999886533 55543211 1122345566788999999999876 799999888 77667766
Q ss_pred hc---CCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCC-CC-
Q 022564 132 LL---KPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGAS-AY- 206 (295)
Q Consensus 132 l~---~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~-n~- 206 (295)
++ .+||+|++...+|+++..++.... ..|.++..++ .+ .++.+|++++++.+++ ++++++++.+ |+
T Consensus 79 ~~~~~~~~~~vv~~~~~~~s~~~~~~~~~-----~~G~~v~~v~--~~-~~g~~~~~~l~~~i~~-~~~lv~i~~~~n~t 149 (379)
T TIGR03402 79 ALAAQPEKRHIITTAVEHPAVLSLCQHLE-----KQGYKVTYLP--VD-EEGRLDLEELRAAITD-DTALVSVMWANNET 149 (379)
T ss_pred HHHhcCCCCeEEEcccccHHHHHHHHHHH-----HcCCEEEEEc--cC-CCCcCCHHHHHHhcCC-CcEEEEEEcccCCe
Confidence 53 567899999999988765544221 2354455554 44 4578999999999987 8999988743 33
Q ss_pred CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCce-EEEEEeCCc
Q 022564 207 ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGV 274 (295)
Q Consensus 207 ~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~~ 274 (295)
|...|+++|.++|+++|+++++|++|+.|..+.++...+ +|++++|+|| ++||.| |+++++++.
T Consensus 150 G~~~~~~~I~~l~~~~g~~vivD~~~~~g~~~~~~~~~~---~D~~~~s~~K-~~gp~G~g~l~v~~~~ 214 (379)
T TIGR03402 150 GTIFPIEEIGEIAKERGALFHTDAVQAVGKIPIDLKEMN---IDMLSLSGHK-LHGPKGVGALYIRKGT 214 (379)
T ss_pred eecccHHHHHHHHHHcCCEEEEECcccccccccCcccCC---CCEEEEcHHH-cCCCCceEEEEECCCC
Confidence 589999999999999999999999999998887776655 9999999999 779999 999999875
No 24
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.91 E-value=1.2e-23 Score=193.71 Aligned_cols=208 Identities=19% Similarity=0.247 Sum_probs=155.1
Q ss_pred ceec-CCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHH
Q 022564 49 LELI-PSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNF 126 (295)
Q Consensus 49 i~L~-~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~ 126 (295)
+.|+ ++..++++.|++++.+++...+ +++....+.......+..+.+++.+++++|++++ +|++++|++ ++.
T Consensus 5 ~yld~aa~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~----~v~~~~g~t~a~~ 78 (402)
T TIGR02006 5 IYLDYAATTPVDPRVAEKMMPYLTEKF--GNPASRSHSFGWEAEEAVENARNQVAELIGADSR----EIVFTSGATESNN 78 (402)
T ss_pred EEeeCCcCCCCCHHHHHHHHHHHHhcC--CCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCC----eEEEeCCHHHHHH
Confidence 3444 3445789999999988876533 3443211111111234566788999999999886 899999998 766
Q ss_pred HHHHhh----cCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEc
Q 022564 127 QVYTAL----LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 202 (295)
Q Consensus 127 ~~~~al----~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~ 202 (295)
.++.++ .++||+|++..++|+++..++... ...|.++..++ .+ +++.+|++++++++++ ++++++++
T Consensus 79 ~~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~-----~~~g~~v~~v~--~~-~~~~~d~~~l~~~l~~-~~~lv~v~ 149 (402)
T TIGR02006 79 LAIKGIAHFYKSKGNHIITSKTEHKAVLDTCRYL-----EREGFEVTYLP--PK-SNGLIDLEELKAAIRD-DTILVSIM 149 (402)
T ss_pred HHHHHHHHhhcCCCCEEEECCCccHHHHHHHHHH-----HhcCCEEEEEc--cC-CCCcCCHHHHHHhcCC-CCEEEEEE
Confidence 566554 368999999999998876654322 12354455554 44 4678999999999976 89999887
Q ss_pred CCCC--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCce-EEEEEeCCch
Q 022564 203 ASAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVK 275 (295)
Q Consensus 203 ~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~ 275 (295)
.+++ |...|+++|.++|+++|+++++|++|++|..+.+..... +|++++|+||+ .||.| |+++++++..
T Consensus 150 ~~~n~tG~~~~~~~I~~l~~~~g~~livD~a~a~g~~~~~~~~~~---~D~~~~s~~K~-~gp~G~G~l~~~~~~~ 221 (402)
T TIGR02006 150 HVNNEIGVIQDIAAIGEICRERKVFFHVDAAQSVGKIPINVNELK---VDLMSISGHKI-YGPKGIGALYVRRKPR 221 (402)
T ss_pred CCCcCceecccHHHHHHHHHHcCCEEEEEcchhcCCcccCccccC---CCEEEEehhhh-cCCCceEEEEEccCCC
Confidence 4444 588899999999999999999999999999887766555 99999999995 57988 9999997643
No 25
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.91 E-value=2.2e-23 Score=193.36 Aligned_cols=210 Identities=15% Similarity=0.135 Sum_probs=155.5
Q ss_pred CceecCC-CCCCCHHHHHHHhhhhhccCCCCCCCC-cccCCcchHHHHHHHHHHHHHHHcCCC-CCCcceeEEeCCChH-
Q 022564 48 GLELIPS-ENFTSVSVMQAVGSVMTNKYSEGYPGA-RYYGGNEYIDMAESLCQKRALEAFRLD-PEKWGVNVQSLSGSP- 123 (295)
Q Consensus 48 ~i~L~~~-~~~~~~~v~~al~~~l~~~~~~g~~~~-~~~~~~~~~~~l~~~~~~~la~~~g~~-~~~~~~~v~~~sG~~- 123 (295)
.+.|+.+ .+++|+.+.+++.+++.+.+ +++.. .++.+ ....+..+.+|+.+++++|++ ++ +|++++|++
T Consensus 33 ~iyLd~a~~~~~p~~v~~a~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~r~~la~~~~~~~~~----~v~~t~g~t~ 105 (424)
T PLN02855 33 LVYLDNAATSQKPAAVLDALQDYYEEYN--SNVHRGIHALS-AKATDAYELARKKVAAFINASTSR----EIVFTRNATE 105 (424)
T ss_pred eEEeeCccccCCCHHHHHHHHHHHHhcC--CCCCCccchHH-HHHHHHHHHHHHHHHHHcCCCCCC----EEEEeCCHHH
Confidence 4666543 44678999999998876532 22222 12222 122334456889999999995 44 899999999
Q ss_pred HHHHHHHh----hcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEE
Q 022564 124 SNFQVYTA----LLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLI 199 (295)
Q Consensus 124 a~~~~~~a----l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i 199 (295)
++..++.+ .+++||+|++++++|++.+.++... +...|.++..++ ++ .++.+|++++++.+++ +|++|
T Consensus 106 al~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~----a~~~g~~v~~v~--~~-~~~~~~~~~l~~~i~~-~t~lv 177 (424)
T PLN02855 106 AINLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLV----AQKTGAVLKFVG--LT-PDEVLDVEQLKELLSE-KTKLV 177 (424)
T ss_pred HHHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHH----HHHcCCEEEEEe--cC-CCCCcCHHHHHHHhcc-CceEE
Confidence 66656655 3689999999999998876544321 223455555555 44 3456999999999987 89999
Q ss_pred EEcCCCC--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCce-EEEEEeCCchh
Q 022564 200 VAGASAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKE 276 (295)
Q Consensus 200 ~l~~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~ 276 (295)
+++.+++ |...|+++|.++|+++|+++++|++|+.|..+.++...+ +|++++|+|| ++||.| |++++++++.+
T Consensus 178 ~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~a~~~g~~~~~~~~~~---~d~~~~s~~K-~~gp~G~G~l~~~~~~~~ 253 (424)
T PLN02855 178 ATHHVSNVLGSILPVEDIVHWAHAVGAKVLVDACQSVPHMPVDVQTLG---ADFLVASSHK-MCGPTGIGFLWGKSDLLE 253 (424)
T ss_pred EEeCccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCcCCCchhcC---CCEEEeeccc-ccCCCccEEEEEchhhhh
Confidence 9974444 589999999999999999999999999988877665555 8999999999 678999 99999988654
No 26
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.91 E-value=2.2e-23 Score=191.98 Aligned_cols=211 Identities=19% Similarity=0.190 Sum_probs=156.5
Q ss_pred CceecC-CCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCC-CCCcceeEEeCCChH-H
Q 022564 48 GLELIP-SENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLD-PEKWGVNVQSLSGSP-S 124 (295)
Q Consensus 48 ~i~L~~-~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~-~~~~~~~v~~~sG~~-a 124 (295)
.+.|+. +.+++|+.+.+++.+.+.+.+ +++....+.......+..+.+++.+++++|++ ++ +|++++|++ +
T Consensus 19 ~~yld~~~~~~~p~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~~~~~----~v~~~~g~t~~ 92 (403)
T TIGR01979 19 LVYLDSAATSQKPQQVIDAVAEYYRNSN--ANVHRGIHTLSVRATEAYEAVREKVAKFINAASDE----EIVFTRGTTES 92 (403)
T ss_pred eEEEeCccccCCCHHHHHHHHHHHHhCC--CCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCCC----eEEEeCCHHHH
Confidence 356654 444778999999998876643 33322111111223344556889999999997 55 899999999 6
Q ss_pred HHHHHHhh----cCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEE
Q 022564 125 NFQVYTAL----LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIV 200 (295)
Q Consensus 125 ~~~~~~al----~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~ 200 (295)
+..++.++ +++||+|++++++|+++..++.. .+...|.++..++ .+ +++.+|++++++.+++ +|++++
T Consensus 93 l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~----~~~~~g~~~~~v~--~~-~~~~~~~~~l~~~i~~-~~~lv~ 164 (403)
T TIGR01979 93 INLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQL----LAERTGATLKFIP--LD-DDGTLDLDDLEKLLTE-KTKLVA 164 (403)
T ss_pred HHHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHH----HHHhcCcEEEEEe--cC-CCCCCCHHHHHHHhcc-CCeEEE
Confidence 66566654 58999999999999887544332 2224565565555 44 5678999999999987 899999
Q ss_pred EcCCCC--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCce-EEEEEeCCchh
Q 022564 201 AGASAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKE 276 (295)
Q Consensus 201 l~~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~ 276 (295)
++.+++ |...|+++|.++|++||+++++|++|+.|..+.++...+ +|++++|+||++ ||.| |++++++++.+
T Consensus 165 ~~~~~~~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~g~~~~~~~~~~---~d~~~~s~~K~~-gp~G~g~l~~~~~~~~ 239 (403)
T TIGR01979 165 ITHVSNVLGTVNPVEEIAKLAHQVGAKVLVDGAQAVPHMPVDVQALD---CDFYVFSGHKMY-GPTGIGVLYGKEELLE 239 (403)
T ss_pred EEcccccccccCCHHHHHHHHHHcCCEEEEEchhhcCccccCccccC---CCEEEEeccccc-CCCCceEEEEchHHHh
Confidence 874444 588999999999999999999999999988776665444 999999999965 7989 99999987543
No 27
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.91 E-value=3.8e-23 Score=188.53 Aligned_cols=208 Identities=15% Similarity=0.156 Sum_probs=156.8
Q ss_pred CCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCC-CCCcceeEEeCCChH-HHHHHHH
Q 022564 53 PSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLD-PEKWGVNVQSLSGSP-SNFQVYT 130 (295)
Q Consensus 53 ~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~-~~~~~~~v~~~sG~~-a~~~~~~ 130 (295)
.+.+++|+.+.+++.+.+...+ ++|.+..+.......+...++++.+++++|++ ++ ++++++|++ ++..++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~----~v~~~~g~t~a~~~~~~ 79 (373)
T cd06453 6 AATSQKPQPVIDAIVDYYRHYN--ANVHRGVHELSARATDAYEAAREKVARFINAPSPD----EIIFTRNTTEAINLVAY 79 (373)
T ss_pred ccccCCCHHHHHHHHHHHHhcC--CCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCC----eEEEeCCHHHHHHHHHH
Confidence 4667889999999999886633 34433112222334556667889999999997 54 789999988 7776888
Q ss_pred hhcC---CCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCC-
Q 022564 131 ALLK---PHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY- 206 (295)
Q Consensus 131 al~~---~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~- 206 (295)
++.. +||+|++++++|++...+.... ++..|.++..++ .+ .++.+|++++++.+++ ++++|+++.+++
T Consensus 80 ~l~~~~~~g~~vl~~~~~~~~~~~~~~~~----~~~~g~~~~~v~--~~-~~~~~d~~~l~~~l~~-~~~~v~~~~~~~~ 151 (373)
T cd06453 80 GLGRANKPGDEIVTSVMEHHSNIVPWQQL----AERTGAKLKVVP--VD-DDGQLDLEALEKLLTE-RTKLVAVTHVSNV 151 (373)
T ss_pred HhhhcCCCCCEEEECcchhHHHHHHHHHH----HhhcCcEEEEee--cC-CCCCcCHHHHHHHhcC-CceEEEEeCcccc
Confidence 8876 9999999998888765433211 224465565565 44 4678999999999987 899999874444
Q ss_pred -CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCceEEEEEeCCchhh
Q 022564 207 -ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEI 277 (295)
Q Consensus 207 -~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~gG~l~~~~~~~~~ 277 (295)
|...|+++|.++|++||+++++|++|+.|..+.+....+ +|++++|+|||++++..|++++++++.+.
T Consensus 152 tG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~---~d~~~~s~~K~~~~~g~g~~~~~~~~~~~ 220 (373)
T cd06453 152 LGTINPVKEIGEIAHEAGVPVLVDGAQSAGHMPVDVQDLG---CDFLAFSGHKMLGPTGIGVLYGKEELLEE 220 (373)
T ss_pred cCCcCCHHHHHHHHHHcCCEEEEEhhhhcCceeeeccccC---CCEEEeccccccCCCCcEEEEEchHHhhc
Confidence 588899999999999999999999999887765544444 99999999999987433999999886543
No 28
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.91 E-value=2.9e-23 Score=190.18 Aligned_cols=209 Identities=14% Similarity=0.090 Sum_probs=154.3
Q ss_pred cCceecCCC--CCCCHHHHHHHhhhhhccCCCCCCCC-cccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH
Q 022564 47 KGLELIPSE--NFTSVSVMQAVGSVMTNKYSEGYPGA-RYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP 123 (295)
Q Consensus 47 ~~i~L~~~~--~~~~~~v~~al~~~l~~~~~~g~~~~-~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~ 123 (295)
+.|||.+-+ +++++.+++++.++... + +.++. .+..+ .......+++++.+++++|++. +.+++|++
T Consensus 19 ~~~~~~~~~~~~p~~~~~~~a~~~~~~~-~--~~~~~~~~~~~-~~~~~~~~~l~~~lA~~~g~~~------~~~~~g~t 88 (387)
T PRK09331 19 EFINLDPIQRGGILTPEARKALIEYGDG-Y--SVCDYCPGRLD-QIKKPPIADFHEDLAEFLGMDE------ARVTHGAR 88 (387)
T ss_pred cccccChhhcCCCCCHHHHHHHHHHHhc-c--CCCcccccccc-cccChHHHHHHHHHHHHhCCCc------EEEeCCHH
Confidence 468886543 46899999999988743 3 33221 11111 1112234557799999999864 45677777
Q ss_pred -HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhc------CC
Q 022564 124 -SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF------RP 196 (295)
Q Consensus 124 -a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~------~t 196 (295)
++.+++.+++++||+|++..+.|.+.+. .+...|.++..++.+.+ +++.+|++++++.+++. ++
T Consensus 89 ~a~~~al~~l~~~gd~Vlv~~~~h~s~~~--------~~~~~G~~~~~v~~~~~-~~~~~d~~~l~~~l~~~~~~~~~~~ 159 (387)
T PRK09331 89 EGKFAVMHSLCKKGDYVVLDGLAHYTSYV--------AAERAGLNVREVPKTGY-PEYKITPEAYAEKIEEVKEETGKPP 159 (387)
T ss_pred HHHHHHHHHhcCCCCEEEECCCchHHHHH--------HHHHcCCEEEEEeCccC-cCCCcCHHHHHHHHHHhhhccCCCC
Confidence 8888899999999999999877776643 23355655655553213 46789999999998742 68
Q ss_pred cEEEEcCCCC--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCce-EEEEEeCC
Q 022564 197 KLIVAGASAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKG 273 (295)
Q Consensus 197 k~i~l~~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~ 273 (295)
++|+++.+++ |...|+++|.++|++||+++++|++|+.|.++.+....+ +|++++|+|||+++|.| |+++++++
T Consensus 160 ~lV~l~~~~~~tG~~~~l~~I~~la~~~g~~livD~a~~~g~~~~~~~~~g---~D~~~~s~~K~l~~~~~~G~l~~~~~ 236 (387)
T PRK09331 160 ALALLTHVDGNYGNLADAKKVAKVAHEYGIPFLLNGAYTVGRMPVDGKKLG---ADFIVGSGHKSMAASAPSGVLATTEE 236 (387)
T ss_pred EEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCcccCCcCCCHHHcC---CCEEEeeCcccccCCCCEEEEEECHH
Confidence 9999874444 688999999999999999999999999998776655444 99999999999998877 99999988
Q ss_pred chhh
Q 022564 274 VKEI 277 (295)
Q Consensus 274 ~~~~ 277 (295)
+.+.
T Consensus 237 ~i~~ 240 (387)
T PRK09331 237 YADK 240 (387)
T ss_pred HHhh
Confidence 6554
No 29
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.91 E-value=3.4e-23 Score=190.36 Aligned_cols=210 Identities=20% Similarity=0.252 Sum_probs=155.7
Q ss_pred ceec-CCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHH
Q 022564 49 LELI-PSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNF 126 (295)
Q Consensus 49 i~L~-~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~ 126 (295)
+.|+ ++..++|+.+++++.+.+.... ..++. .|.......++.+.+++.+++++|++++ +|++++|++ ++.
T Consensus 19 ~yl~~~~~~~~p~~v~~a~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~l~~~ia~~~~~~~~----~v~~~~~~t~~l~ 91 (397)
T TIGR01976 19 VFFDNPAGTQIPQSVADAVSAALTRSN--ANRGG-AYESSRRADQVVDDAREAVADLLNADPP----EVVFGANATSLTF 91 (397)
T ss_pred EEecCCccCCCCHHHHHHHHHHHHhcC--CCCCC-CchHHHHHHHHHHHHHHHHHHHcCCCCC----eEEEeCCHHHHHH
Confidence 5564 5555789999999999886522 12211 1222234456677888999999999775 789999988 655
Q ss_pred HHHHhh---cCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcC
Q 022564 127 QVYTAL---LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGA 203 (295)
Q Consensus 127 ~~~~al---~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~ 203 (295)
.++.++ +++||+|++++++|.+++..+.. .+...|.++..++ .+.+++.+|++++++++++ +|++|+++.
T Consensus 92 ~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~----~~~~~g~~~~~~~--~~~~~~~~~~~~l~~~i~~-~~~lv~i~~ 164 (397)
T TIGR01976 92 LLSRAISRRWGPGDEVIVTRLDHEANISPWLQ----AAERAGAKVKWAR--VDEATGELHPDDLASLLSP-RTRLVAVTA 164 (397)
T ss_pred HHHHHHHhcCCCCCEEEEcCCchHhHHHHHHH----HHHhcCCEEEEEe--ccccCCCcCHHHHHHhcCC-CceEEEEeC
Confidence 455554 68999999999888887544321 2234565555554 4433578999999999986 899999974
Q ss_pred CCC--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCceEEEEEeCCchh
Q 022564 204 SAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKE 276 (295)
Q Consensus 204 ~n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~gG~l~~~~~~~~ 276 (295)
+++ |...|+++|.++|++||+++++|++|+.|....++...+ +|++++|+|||+ ||+.|++++++++.+
T Consensus 165 ~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~---~d~~~~s~~K~~-g~~~G~l~~~~~~~~ 235 (397)
T TIGR01976 165 ASNTLGSIVDLAAITELVHAAGALVVVDAVHYAPHGLIDVQATG---ADFLTCSAYKFF-GPHMGILWGRPELLM 235 (397)
T ss_pred CCCCCCccCCHHHHHHHHHHcCCEEEEehhhhccccCCCHHHcC---CCEEEEechhhc-CCceEEEEEcHHHHh
Confidence 444 588899999999999999999999998876655554444 999999999987 677899999988654
No 30
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.91 E-value=5.3e-23 Score=186.42 Aligned_cols=204 Identities=16% Similarity=0.092 Sum_probs=153.4
Q ss_pred ceecCCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHH
Q 022564 49 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQ 127 (295)
Q Consensus 49 i~L~~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~ 127 (295)
+++++|+.++++.+.+++.+.+.... .....++.+.+++.+++++|++++. .+++++|++ ++..
T Consensus 1 ~~~~~~~~~~~~~v~~a~~~~~~~~~------------~~~~~~~~~~~~~~la~~~g~~~~~---~~~~~~~~t~al~~ 65 (356)
T cd06451 1 LLLIPGPSNVPPRVLKAMNRPMLGHR------------SPEFLALMDEILEGLRYVFQTENGL---TFLLSGSGTGAMEA 65 (356)
T ss_pred CcccCCCcCCCHHHHHHhCCCccCCC------------CHHHHHHHHHHHHHHHHHhcCCCCC---EEEEecCcHHHHHH
Confidence 47889999999999999976542210 1233456667889999999995432 566666655 8777
Q ss_pred HHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCC-
Q 022564 128 VYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY- 206 (295)
Q Consensus 128 ~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~- 206 (295)
++.+++++||+|+++.+.|.+.. . ...+...|.++..++ .+ +++.+|++++++.++++++++|+++.+++
T Consensus 66 ~~~~~~~~g~~vl~~~~~~~~~~--~----~~~~~~~g~~~~~v~--~~-~~~~~~~~~l~~~i~~~~~~~v~i~~~~~~ 136 (356)
T cd06451 66 ALSNLLEPGDKVLVGVNGVFGDR--W----ADMAERYGADVDVVE--KP-WGEAVSPEEIAEALEQHDIKAVTLTHNETS 136 (356)
T ss_pred HHHHhCCCCCEEEEecCCchhHH--H----HHHHHHhCCCeEEee--cC-CCCCCCHHHHHHHHhccCCCEEEEeccCCC
Confidence 88899999999999886655421 1 112334565565555 44 35789999999999755899999874443
Q ss_pred -CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCce-EEEEEeCCchhhhc
Q 022564 207 -ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINK 279 (295)
Q Consensus 207 -~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~~~ 279 (295)
|...|+++|.++|+++|+++++|++|++|..+.+.... ++|++++|+||||++|.| |+++.+++..+...
T Consensus 137 ~G~~~~~~~i~~~a~~~~~~li~D~~~~~g~~~~~~~~~---~~d~~~~s~~K~l~~p~g~G~l~~~~~~~~~~~ 208 (356)
T cd06451 137 TGVLNPLEGIGALAKKHDALLIVDAVSSLGGEPFRMDEW---GVDVAYTGSQKALGAPPGLGPIAFSERALERIK 208 (356)
T ss_pred cccccCHHHHHHHHHhcCCEEEEeeehhccCcccccccc---CccEEEecCchhccCCCCcceeEECHHHHHHHH
Confidence 58899999999999999999999999988766554443 389999999999999988 99999988655443
No 31
>PRK02948 cysteine desulfurase; Provisional
Probab=99.90 E-value=5.3e-23 Score=188.18 Aligned_cols=202 Identities=17% Similarity=0.245 Sum_probs=155.8
Q ss_pred CCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHh
Q 022564 53 PSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTA 131 (295)
Q Consensus 53 ~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~a 131 (295)
++..++++.+++++.+++...+ ++++..+..+ ....++.+.+++.+++++|++++ +|++++|++ ++..++.+
T Consensus 7 a~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~r~~la~~~g~~~~----~i~~~~g~t~a~~~~~~~ 79 (381)
T PRK02948 7 AATTPMSKEALQTYQKAASQYF--GNESSLHDIG-GTASSLLQVCRKTFAEMIGGEEQ----GIYFTSGGTESNYLAIQS 79 (381)
T ss_pred CCCCCCCHHHHHHHHHHHHhcC--CCCccccHHH-HHHHHHHHHHHHHHHHHhCCCCC----eEEEeCcHHHHHHHHHHH
Confidence 4555789999999998887533 3333322222 23445677789999999999876 899999988 77767777
Q ss_pred hc----CCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCC-
Q 022564 132 LL----KPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY- 206 (295)
Q Consensus 132 l~----~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~- 206 (295)
++ ++||.|++...+|+++...... ++..|.++..++ ++ +++.+|++++++.+++ ++++|+++.+++
T Consensus 80 ~~~~~~~~g~~vv~~~~~h~s~~~~~~~-----~~~~g~~v~~v~--~~-~~~~~d~~~l~~~l~~-~~~lv~~~~~~n~ 150 (381)
T PRK02948 80 LLNALPQNKKHIITTPMEHASIHSYFQS-----LESQGYTVTEIP--VD-KSGLIRLVDLERAITP-DTVLASIQHANSE 150 (381)
T ss_pred HHHhccCCCCEEEECCcccHHHHHHHHH-----HHhCCCEEEEEe--eC-CCCCCCHHHHHHhcCC-CCEEEEEECCcCC
Confidence 64 5799999999999887654432 223455555555 44 4578999999999976 889998885554
Q ss_pred -CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCce-EEEEEeCCc
Q 022564 207 -ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGV 274 (295)
Q Consensus 207 -~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~~ 274 (295)
|...|+++|.++|+++|+++++|++|++|..+.+....+ +|++++|+||++ ||.| |++++++++
T Consensus 151 tG~~~~~~~I~~l~~~~~~~vivD~~~~~g~~~~~~~~~~---~d~~~~s~~K~~-gp~G~G~l~~~~~~ 216 (381)
T PRK02948 151 IGTIQPIAEIGALLKKYNVLFHSDCVQTFGKLPIDVFEMG---IDSLSVSAHKIY-GPKGVGAVYINPQV 216 (381)
T ss_pred cEeehhHHHHHHHHHHcCCEEEEEChhhccccccCcccCC---CCEEEecHHhcC-CCCcEEEEEEcCCC
Confidence 588999999999999999999999999998777666555 999999999964 7998 999998875
No 32
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.90 E-value=6.9e-23 Score=188.49 Aligned_cols=204 Identities=15% Similarity=0.132 Sum_probs=156.4
Q ss_pred ceecCCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHH
Q 022564 49 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQ 127 (295)
Q Consensus 49 i~L~~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~ 127 (295)
+.+.+|...+++.|+++|...+.. + . .....++.+.+++.+++++|++.++ .++++++++ ++.+
T Consensus 11 ~l~~pGP~~~~~~V~~a~~~~~~~-~----------~-~~~~~~~~~~~~~~l~~~~g~~~~~---~vi~~~~gt~a~~~ 75 (401)
T PLN02409 11 HLFVPGPVNIPERVLRAMNRPNED-H----------R-SPAFPALTKELLEDVKYIFKTKSGT---PFIFPTTGTGAWES 75 (401)
T ss_pred eeccCCCCCCCHHHHHHhcCCCCC-C----------C-CHHHHHHHHHHHHHHHHHhCCCCCC---EEEEeCCcHHHHHH
Confidence 456778878899999999765432 1 1 2455678888999999999997643 566666666 8777
Q ss_pred HHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhh---cCCcEEEEcC-
Q 022564 128 VYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL---FRPKLIVAGA- 203 (295)
Q Consensus 128 ~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~---~~tk~i~l~~- 203 (295)
++..++++||+|+++++.|.+.. +. ..++..|.++..++ .+ .+..+|++++++++++ +++++|+++.
T Consensus 76 a~~~~~~~Gd~Vlv~~~~~~~~~--~~----~~~~~~g~~v~~v~--~~-~~~~~~~~~l~~~l~~~~~~~~k~v~~~~~ 146 (401)
T PLN02409 76 ALTNTLSPGDKVVSFRIGQFSLL--WI----DQMQRLNFDVDVVE--SP-WGQGADLDILKSKLRQDTNHKIKAVCVVHN 146 (401)
T ss_pred HHHhcCCCCCEEEEeCCCchhHH--HH----HHHHHcCCceEEEE--CC-CCCCCCHHHHHHHHhhCcCCCccEEEEEee
Confidence 88888999999999997665442 11 12334565565565 33 2345899999999975 3789998873
Q ss_pred CCC-CCccCHHHHHHH--HHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCce-EEEEEeCCchhhhc
Q 022564 204 SAY-ARLYDYERIRKV--CNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINK 279 (295)
Q Consensus 204 ~n~-~~~~~l~~I~~i--a~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~~~ 279 (295)
+|. |...|+++|.++ |+++|+++++|++|++|..+.+...++ +|++++|+||||++|.| |+++++++..+...
T Consensus 147 ~~~tG~~~~~~~i~~l~~~~~~g~~~vvD~v~s~g~~~id~~~~~---~D~~~~s~~K~l~~P~G~G~l~~~~~~~~~~~ 223 (401)
T PLN02409 147 ETSTGVTNDLAGVRKLLDCAQHPALLLVDGVSSIGALDFRMDEWG---VDVALTGSQKALSLPTGLGIVCASPKALEASK 223 (401)
T ss_pred cccccccCCHHHHHHHHhhhccCcEEEEEcccccCCccccccccC---ccEEEEcCccccCcCCCcceeEECHHHHHHHh
Confidence 333 688999999999 999999999999999998887776666 99999999999999999 99999988765443
No 33
>PRK14012 cysteine desulfurase; Provisional
Probab=99.90 E-value=6.8e-23 Score=188.86 Aligned_cols=203 Identities=19% Similarity=0.244 Sum_probs=150.4
Q ss_pred CCCCCCCHHHHHHHhhhhh--ccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHH
Q 022564 53 PSENFTSVSVMQAVGSVMT--NKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVY 129 (295)
Q Consensus 53 ~~~~~~~~~v~~al~~~l~--~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~ 129 (295)
++..++++.+.+++.+++. +.+ +++...............+.+++.+++++|++++ ++++++|++ ++..++
T Consensus 10 a~~~~~~~~v~~a~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g~~~~----~v~~~~g~t~al~~~l 83 (404)
T PRK14012 10 SATTPVDPRVAEKMMPYLTMDGTF--GNPASRSHRFGWQAEEAVDIARNQIADLIGADPR----EIVFTSGATESDNLAI 83 (404)
T ss_pred cCCCCCCHHHHHHHHHHHHhcccC--cCCCchhhHHHHHHHHHHHHHHHHHHHHcCcCcC----eEEEeCCHHHHHHHHH
Confidence 4455789999999998876 433 3332211110011134555678999999999876 788999988 666566
Q ss_pred Hhh----cCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCC
Q 022564 130 TAL----LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASA 205 (295)
Q Consensus 130 ~al----~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n 205 (295)
.++ .++||+|+++..+|+++..++..+ ...|.++..++ .+ +++.+|++++++++++ ++++++++..+
T Consensus 84 ~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~-----~~~g~~~~~v~--~~-~~g~~d~~~l~~~i~~-~t~lv~~~~~~ 154 (404)
T PRK14012 84 KGAAHFYQKKGKHIITSKTEHKAVLDTCRQL-----EREGFEVTYLD--PQ-SNGIIDLEKLEAAMRD-DTILVSIMHVN 154 (404)
T ss_pred HHHHHhhcCCCCEEEEecCccHHHHHHHHHH-----HhCCCEEEEEc--cC-CCCcCCHHHHHHhcCC-CCEEEEEECcC
Confidence 655 478999999999998876654322 12354454454 44 4678999999999987 89998887443
Q ss_pred -C-CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCce-EEEEEeCCc
Q 022564 206 -Y-ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGV 274 (295)
Q Consensus 206 -~-~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~~ 274 (295)
+ |...|+++|.++|+++|+++++|++|++|..+.+..... +|++++|+||. .||.| |+++++++.
T Consensus 155 n~tG~~~~~~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~---~D~~~~s~~K~-~gp~g~G~l~~~~~~ 222 (404)
T PRK14012 155 NEIGVIQDIAAIGEICRERGIIFHVDAAQSVGKVPIDLSKLK---VDLMSFSAHKI-YGPKGIGALYVRRKP 222 (404)
T ss_pred CCccchhhHHHHHHHHHHcCCEEEEEcchhcCCcccCcccCC---CCEEEEehhhc-cCCCceEEEEEecCC
Confidence 3 588899999999999999999999999998876665544 99999999995 57888 999998774
No 34
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.90 E-value=2.1e-22 Score=184.29 Aligned_cols=202 Identities=17% Similarity=0.296 Sum_probs=149.5
Q ss_pred CCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCC-CCCCcceeEEeCCChH-HHHHHHH
Q 022564 53 PSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL-DPEKWGVNVQSLSGSP-SNFQVYT 130 (295)
Q Consensus 53 ~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~-~~~~~~~~v~~~sG~~-a~~~~~~ 130 (295)
++..+++++|++++.+++.+.+ ++|+..+..+......++++. +.+.+.+++ +++ +|++|+|++ ++..++.
T Consensus 6 aa~~~~~~~v~~~~~~~~~~~~--~n~~~~~~~~~~~~~~l~~a~-~~~~~~~~~~~~~----~i~~t~g~teal~~~~~ 78 (382)
T TIGR03403 6 NATTMLDPKVKELMDPFFCDIY--GNPNSLHQFGTATHPAIAEAL-DKLYKGINARDLD----DIIITSCATESNNWVLK 78 (382)
T ss_pred cCCCCCCHHHHHHHHHHHHhcC--cCCccccHHHHHHHHHHHHHH-HHHHHHcCcCCCC----eEEEeCCHHHHHHHHHH
Confidence 4455678999999999887644 444432222223344555443 455556776 565 899999999 7776777
Q ss_pred hhc-----CC-CCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCC
Q 022564 131 ALL-----KP-HDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGAS 204 (295)
Q Consensus 131 al~-----~~-gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~ 204 (295)
++. ++ +|+|+++..+|+++..+.... ...|.++..++ ++ +++.+|++++++++++ ++++++++.+
T Consensus 79 ~~~~~~~~~~~~~~vi~~~~e~ps~~~~~~~~-----~~~G~~v~~v~--~~-~~g~~d~~~l~~~i~~-~t~lv~~~~~ 149 (382)
T TIGR03403 79 GVYFDEILKGGKNHIITTEVEHPAVRATCAFL-----ESLGVEVTYLP--IN-EQGTITAEQVREAITE-KTALVSVMWA 149 (382)
T ss_pred HHHHhhcccCCCCEEEEcCCccHHHHHHHHHH-----HHCCCEEEEEe--cC-CCCCCCHHHHHHhccc-CCeEEEEEcc
Confidence 652 45 478999999999886654322 23455555555 44 4578999999999987 8999988744
Q ss_pred CC--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCce-EEEEEeCCc
Q 022564 205 AY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGV 274 (295)
Q Consensus 205 n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~~ 274 (295)
+| |...|+++|.++|+++|+++++|++|+.|..+.+....+ +|++++|+||| .||+| |++++|++.
T Consensus 150 ~n~tG~~~~~~~I~~la~~~g~~~ivD~a~~~g~~~~~~~~~~---~D~~~~s~~K~-~gp~G~g~l~vr~~~ 218 (382)
T TIGR03403 150 NNETGMIFPIKEIGEICKERGVLFHTDAVQAIGKIPVDVQKAG---VDFLSFSAHKF-HGPKGVGGLYIRKGV 218 (382)
T ss_pred cCCCccccCHHHHHHHHHHcCCEEEEechhhcCCCccCccccC---CCEEEEcchhh-CCCCceEEEEECCCC
Confidence 44 588999999999999999999999999998877665555 99999999997 58999 999999875
No 35
>PRK02769 histidine decarboxylase; Provisional
Probab=99.89 E-value=1.1e-21 Score=178.32 Aligned_cols=201 Identities=18% Similarity=0.136 Sum_probs=144.4
Q ss_pred HHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhh--cCCC
Q 022564 60 VSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTAL--LKPH 136 (295)
Q Consensus 60 ~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al--~~~g 136 (295)
....+.+.....+.+ |+|...+..+ ....++++++++++++++|+++++ .-..+|+|++ +++.++.+. ..++
T Consensus 36 ~~~~~~~~~~~~~n~--gnp~~~~~~g-~~~~~~e~~~~~~~a~l~g~~~~~--~~G~~TsGgTean~~a~~~ar~~~~~ 110 (380)
T PRK02769 36 YSALKRFFSFSINNC--GDPYSKSNYP-LNSFDFERDVMNFFAELFKIPFNE--SWGYITNGGTEGNLYGCYLARELFPD 110 (380)
T ss_pred HHHHHHHHHhhhccC--CCccccCCCC-CChHHHHHHHHHHHHHHhCCCCCC--CCEEEecChHHHHHHHHHHHHHhCCC
Confidence 455555666555544 5554422111 234678888999999999997642 1247789988 776554443 4678
Q ss_pred CeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhc--CCcEEEEc-CCC-CCCccCH
Q 022564 137 DRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF--RPKLIVAG-ASA-YARLYDY 212 (295)
Q Consensus 137 d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~--~tk~i~l~-~~n-~~~~~~l 212 (295)
++|++++.+|.++...+. ..|.+...++ .+ +++.+|+++|++++++. +|.+|+++ .++ .|.+.|+
T Consensus 111 ~~ii~s~~~H~Sv~ka~~--------~lg~~~~~V~--~~-~~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idpi 179 (380)
T PRK02769 111 GTLYYSKDTHYSVSKIAR--------LLRIKSRVIT--SL-PNGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAIDNI 179 (380)
T ss_pred cEEEeCCCceehHHHHHH--------HcCCCCceec--cC-CCCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCCH
Confidence 999999999999875443 3444444454 44 46889999999999872 38888776 333 3799999
Q ss_pred HHHHHHHHHcC---CEEEEEccccccccccCCCCCCC---CcceEEEeCCCCCCCCCce-EEEEEeCCchh
Q 022564 213 ERIRKVCNKQK---AIMLADMAHISGLVAAGVIPSPF---EYADVVTTTTHKSLRGPRG-AMIFFRKGVKE 276 (295)
Q Consensus 213 ~~I~~ia~~~~---~~vivD~a~~~g~~~~~~~~~~~---~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~ 276 (295)
++|+++|+++| +++++|+||+.+.++......++ .++|++++|+|||+++|.| |++++|++..+
T Consensus 180 ~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~~~d~~~~vDsis~s~HK~~~~P~g~G~l~~r~~~~~ 250 (380)
T PRK02769 180 KEIQEILKKIGIDDYYIHADAALSGMILPFVNNPPPFSFADGIDSIAISGHKFIGSPMPCGIVLAKKKYVE 250 (380)
T ss_pred HHHHHHHHHhCCCceEEEEEecccceeecccCccccCCccCCCCEEEECCcccCCCCCCcEEEEEehhhhh
Confidence 99999999998 69999999999888642211111 1599999999999988999 99999987544
No 36
>PLN03032 serine decarboxylase; Provisional
Probab=99.88 E-value=5.4e-21 Score=172.76 Aligned_cols=202 Identities=15% Similarity=0.115 Sum_probs=148.5
Q ss_pred CHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhhc--CC
Q 022564 59 SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALL--KP 135 (295)
Q Consensus 59 ~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al~--~~ 135 (295)
...++++|.+++.+.+ |+|...+.. .....++++++++++++++|++++++ .-++|||+| +|+.++.+.. .+
T Consensus 36 ~~~~~~~~~~~~~~~~--gnP~s~~~~-g~~a~~~e~~v~~~ia~llg~~~~~~--~G~fTsGGTEaNl~al~~ar~~~~ 110 (374)
T PLN03032 36 DYGELSQLMKYSINNL--GDPFIESNY-GVHSRQFEVGVLDWFARLWELEKDEY--WGYITTCGTEGNLHGILVGREVFP 110 (374)
T ss_pred ChHHHHHHHHhcccCC--CCCcccCCC-CccHHHHHHHHHHHHHHHhCCCCccC--CEEEeCchHHHHHHHHHHHHHhCC
Confidence 4457888888877655 777653222 23457889999999999999987620 137888888 8876665542 35
Q ss_pred CCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhc--CCcEEEEc--CCCCCCccC
Q 022564 136 HDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF--RPKLIVAG--ASAYARLYD 211 (295)
Q Consensus 136 gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~--~tk~i~l~--~~n~~~~~~ 211 (295)
+..|+++..+|.++.... ...|..+..+| ++ +++.+|+++|++++++. +|.+|+++ ++..|.+.|
T Consensus 111 ~~~vi~s~~~H~Sv~kaa--------~~lg~~~~~V~--~d-~~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~idp 179 (374)
T PLN03032 111 DGILYASRESHYSVFKAA--------RMYRMEAVKVP--TL-PSGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAVDD 179 (374)
T ss_pred CcEEEeCCCceeHHHHHH--------HHcCCCCeEee--eC-CCCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccCCC
Confidence 668999999998887543 34454455565 45 57899999999999762 36677665 344479999
Q ss_pred HHHHHHHHHHcC-----CEEEEEccccccccccCCCCC--CC-CcceEEEeCCCCCCCCCce-EEEEEeCCchh
Q 022564 212 YERIRKVCNKQK-----AIMLADMAHISGLVAAGVIPS--PF-EYADVVTTTTHKSLRGPRG-AMIFFRKGVKE 276 (295)
Q Consensus 212 l~~I~~ia~~~~-----~~vivD~a~~~g~~~~~~~~~--~~-~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~ 276 (295)
+++|+++|+++| +|+++|+|++.+.++...... .+ .++|.+++|+||+++.|.| |++++|++..+
T Consensus 180 i~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~~~~vDSis~s~HK~~g~P~g~G~ll~r~~~~~ 253 (374)
T PLN03032 180 LDRILRILKELGYTEDRFYIHCDGALFGLMMPFVSRAPEVTFRKPIGSVSVSGHKFLGCPMPCGVALTRKKHVK 253 (374)
T ss_pred HHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccCCCcccCCCcCCcEEEECcccccCCCcCeEEEEEEchhhH
Confidence 999999999996 599999999888776422111 11 2499999999998877999 99999987543
No 37
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.88 E-value=7.1e-22 Score=182.19 Aligned_cols=212 Identities=13% Similarity=0.078 Sum_probs=144.8
Q ss_pred cCceec-CCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-H
Q 022564 47 KGLELI-PSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-S 124 (295)
Q Consensus 47 ~~i~L~-~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a 124 (295)
+.+.|+ .+..++|+.+.+++.+++.. +..+....+ +.+......+.+..++ + +++|++++ +|++++|++ +
T Consensus 27 ~~iyld~~a~g~~p~~v~~a~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~-~-~l~g~~~~----~v~~~~~~t~~ 98 (406)
T TIGR01814 27 AVIYLDGNSLGLMPKAARNALKEELDK-WAKIAIRGH-NTGKAPWFTLDESLLK-L-RLVGAKED----EVVVMNTLTIN 98 (406)
T ss_pred CcEEecCCCcCcCcHHHHHHHHHHHHH-HHHhhhccC-ccCCCChhhhhhhhcc-c-cccCCCCC----cEEEeCCchHH
Confidence 357787 55556789999999887754 311111111 1111111223333333 4 79999886 799999999 6
Q ss_pred HHHHHHhhcCCCC---eEEEecCCCCcccCccccccccccccceeeeE--EEeeecCCCCCCCCHHHHHHHHh--hcCCc
Q 022564 125 NFQVYTALLKPHD---RIMALDLPHGGHLSHGYQTDTKKISAVSIFFE--TMPYRLNESTGYIDYDQLEKSAT--LFRPK 197 (295)
Q Consensus 125 ~~~~~~al~~~gd---~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~v~~~~~~~~~~id~e~l~~~i~--~~~tk 197 (295)
+..++.+++++++ .|++...+|++...++... +...|.++. .+.++.+ +++.+|++++++.++ ..+|+
T Consensus 99 l~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~----~~~~g~~~~~~~~~~~~~-~~g~~~~~~l~~~~~~~~~~t~ 173 (406)
T TIGR01814 99 LHLLLASFYKPTPKRYKILLEAKAFPSDHYAIESQ----LQLHGLTVEESMVQIEPR-EEETLRLEDILDTIEKNGDDIA 173 (406)
T ss_pred HHHHHHHhcCCcCCccEEEecCCCCChHHHHHHHH----HHhcCCCcccceEEeccC-CCCccCHHHHHHHHHhcCCCeE
Confidence 6657788776643 6888788888865544311 112343331 1222233 356789999998885 23789
Q ss_pred EEEEcCCC--CCCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCceEEEEEeCCc
Q 022564 198 LIVAGASA--YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGV 274 (295)
Q Consensus 198 ~i~l~~~n--~~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~gG~l~~~~~~ 274 (295)
+|+++..+ .|...|+++|+++|+++|+++++|++|++|.++.++..++ +|++++|+||||+||+||+++++++.
T Consensus 174 lv~~~~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~~~id~~~~g---vD~~~~s~hK~l~g~pG~~l~v~~~~ 249 (406)
T TIGR01814 174 VILLSGVQYYTGQLFDMAAITRAAHAKGALVGFDLAHAVGNVPLDLHDWG---VDFACWCTYKYLNAGPGAGAFVHEKH 249 (406)
T ss_pred EEEEeccccccceecCHHHHHHHHHHcCCEEEEEcccccCCcccccccCC---CCEEEEcCccccCCCCCeEEEEehhh
Confidence 99887333 3789999999999999999999999999999998887666 99999999999987768667766553
No 38
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.88 E-value=2.3e-21 Score=176.08 Aligned_cols=202 Identities=15% Similarity=0.099 Sum_probs=144.6
Q ss_pred CCCCCCHHHHHHHhhhhhccCCCCCCCC-cccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHh
Q 022564 54 SENFTSVSVMQAVGSVMTNKYSEGYPGA-RYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTA 131 (295)
Q Consensus 54 ~~~~~~~~v~~al~~~l~~~~~~g~~~~-~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~a 131 (295)
...+..+.+++++.+.... + +.+.. .+..+ .........+++.+++++|+ + ++++++|++ ++..++.+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~-~~~~~~~~~l~~~la~~~g~--~----~i~~~~g~t~al~~~l~~ 78 (361)
T cd06452 9 RGGRLTPEARKALIEWGDG-Y--SVCDFCRGRLD-EIEKPPIKDFHHDLAEFLGM--D----EARVTPGAREGKFAVMHS 78 (361)
T ss_pred cCCCCCHHHHHHHHHHhcc-c--CCccccccccc-cccCchHHHHHHHHHHHcCC--c----eEEEeCCHHHHHHHHHHH
Confidence 3446788899998876632 2 22211 00011 01111233466889999998 3 788999999 88878889
Q ss_pred hcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCC-CCCCCHHHHHHHHhh------cCCcEEEEcCC
Q 022564 132 LLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES-TGYIDYDQLEKSATL------FRPKLIVAGAS 204 (295)
Q Consensus 132 l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~-~~~id~e~l~~~i~~------~~tk~i~l~~~ 204 (295)
++++||+|+++.+.|.+.+. .+...|.++..++ .+.+ ++.+|++++++++++ .++++|+++.+
T Consensus 79 ~~~~gd~Vl~~~~~~~~~~~--------~~~~~g~~~~~v~--~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p 148 (361)
T cd06452 79 LCEKGDWVVVDGLAHYTSYV--------AAERAGLNVREVP--NTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHV 148 (361)
T ss_pred hcCCCCEEEEcCCcchHHHH--------HHHhcCCEEEEEe--cCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECC
Confidence 99999999999877766532 2335565555555 4422 358999999998863 26889999855
Q ss_pred CC--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCce-EEEEEeCCchhhh
Q 022564 205 AY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEIN 278 (295)
Q Consensus 205 n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~~ 278 (295)
++ |...|+++|.++|+++|+++++|+||+.|..+...... ++|++++|+||++++|.+ |++++++++.+..
T Consensus 149 ~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~~~~~~~---~~d~~~~s~~K~l~~~~~~G~l~~~~~~~~~l 222 (361)
T cd06452 149 DGNYGNLHDAKKIAKVCHEYGVPLLLNGAYTVGRMPVSGKEL---GADFIVGSGHKSMAASAPIGVLATTEEWADIV 222 (361)
T ss_pred CCCCeeeccHHHHHHHHHHcCCeEEEECCcccCCcCCCHHHc---CCCEEEecCCccccCCCCeEEEEECHHHHHHH
Confidence 55 48889999999999999999999999987665443333 389999999999987666 9999998766544
No 39
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.87 E-value=3.8e-21 Score=174.84 Aligned_cols=200 Identities=13% Similarity=0.102 Sum_probs=146.9
Q ss_pred ceecCCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHH
Q 022564 49 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQ 127 (295)
Q Consensus 49 i~L~~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~ 127 (295)
+-+.+|...+++.|.+++.....+ + . ....++.+.+++.+++++|++++. ..|++++|++ ++..
T Consensus 5 ~l~~pgp~~~~~~v~~~~~~~~~~-~-----------~-~~~~~~~~~~r~~la~l~~~~~~~--~~i~~t~~~t~al~~ 69 (363)
T TIGR02326 5 LLLTPGPLTTSRTVKEAMLFDWCT-W-----------D-SDYNIVVEQIRQQLLALATAEEGY--TSVLLQGSGTFAVEA 69 (363)
T ss_pred eEecCCCCCCCHHHHHHhCCCCCC-C-----------C-hHHHHHHHHHHHHHHHHhCCCCCc--eEEEEcCCCHHHHHH
Confidence 456777777889998887664321 1 1 234456667899999999997531 1688888877 8887
Q ss_pred HHHhhcCCCCeEEEecCC-CCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhc-CCcEEEEc-CC
Q 022564 128 VYTALLKPHDRIMALDLP-HGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF-RPKLIVAG-AS 204 (295)
Q Consensus 128 ~~~al~~~gd~Vl~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~-~tk~i~l~-~~ 204 (295)
++.+++.+||.+++..+. |+..+ ...+...|.++..++ .+ .++.+|+++++++++.. +++++.++ ..
T Consensus 70 ~~~~l~~~~~~vlv~~~~~~~~~~-------~~~a~~~g~~~~~v~--~~-~~~~~d~~~l~~~l~~~~~~~~v~~~~~~ 139 (363)
T TIGR02326 70 VIGSAVPKDGKLLVVINGAYGARI-------VQIAEYLGIPHHVVD--TG-EVEPPDVVEVEAILAADPAITHIALVHCE 139 (363)
T ss_pred HHHhcCCCCCeEEEEeCChhhHHH-------HHHHHHcCCceEEEe--CC-CCCCCCHHHHHHHHhhCCCccEEEEEeec
Confidence 888888898887775532 22110 012234565565555 43 45789999999998752 45666664 33
Q ss_pred C-CCCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCce-EEEEEeCCchh
Q 022564 205 A-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKE 276 (295)
Q Consensus 205 n-~~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~ 276 (295)
+ .|...|+++|.++|++||+++++|++|++|..+.++..++ +|++++|+||||+||.| |+++++++..+
T Consensus 140 ~~tG~~~~i~~I~~l~~~~g~~livD~~~~~g~~~~~~~~~~---~D~~~~s~~K~l~~p~G~G~l~~~~~~~~ 210 (363)
T TIGR02326 140 TTTGILNPIEAVAKLAHRHGKVTIVDAMSSFGGIPIDIAELH---IDYLISSANKCIQGVPGFGFVIARQAELA 210 (363)
T ss_pred CCccccCcHHHHHHHHHHcCCEEEEEccccccCcccchhhcC---ccEEEecCccccccCCcceEEEECHHHHH
Confidence 3 3688999999999999999999999999998887766665 99999999999999999 99999987654
No 40
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.87 E-value=4.3e-21 Score=171.44 Aligned_cols=190 Identities=18% Similarity=0.189 Sum_probs=150.0
Q ss_pred CCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhh-
Q 022564 54 SENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTAL- 132 (295)
Q Consensus 54 ~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al- 132 (295)
..+....+..+++.+.+.+.+. ...+...++| +.+++++|++. .+.+.||++|+..++.++
T Consensus 9 ~~p~i~~~e~~~v~~vl~sg~i---------~~G~~v~~FE----~~~ae~~G~k~-----ava~~sgT~AL~laL~al~ 70 (374)
T COG0399 9 SRPSIGEEELAAVQEVLKSGWL---------TGGPFVRRFE----QAFAEYLGVKY-----AVAVSSGTAALHLALLALA 70 (374)
T ss_pred CCCCcchHHHHHHHHHHHcCCe---------ecChHHHHHH----HHHHHHhCCCe-----EEEecChHHHHHHHHHhcC
Confidence 4444678888999999987552 1123445555 88999999988 789999999877788876
Q ss_pred cCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCCCccCH
Q 022564 133 LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDY 212 (295)
Q Consensus 133 ~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l 212 (295)
+.|||+|+++...+.+..+ .+...|++. +.+++|++++.+|++.+|++|++ +||+|+.. +-.|...|+
T Consensus 71 ig~GDeVI~ps~TfvATan--------~i~~~Ga~P--VFvDid~~T~nid~~~ie~aIt~-~tKAIipV-hl~G~~~dm 138 (374)
T COG0399 71 IGPGDEVIVPSFTFVATAN--------AVLLVGAKP--VFVDIDPDTLNIDPDLIEAAITP-RTKAIIPV-HLAGQPCDM 138 (374)
T ss_pred CCCCCEEEecCCchHHHHH--------HHHHcCCeE--EEEecCCcccCCCHHHHHHHccc-CCeEEEEe-hhccCCCCH
Confidence 8999999999976666644 333567544 66678888999999999999998 89998753 334667799
Q ss_pred HHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCceEEEEEeCC
Q 022564 213 ERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKG 273 (295)
Q Consensus 213 ~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~gG~l~~~~~ 273 (295)
++|.++|++||++||.|+||+.|....+.....+..+-+++|.++|.+....||+++++++
T Consensus 139 ~~i~~la~~~~l~vIEDaAqa~Ga~y~gk~vGt~Gd~~~fSF~~~K~ittgEGGav~tnd~ 199 (374)
T COG0399 139 DAIMALAKRHGLPVIEDAAQAHGATYKGKKVGSFGDIGAFSFHATKNLTTGEGGAVVTNDE 199 (374)
T ss_pred HHHHHHHHHcCCeEEEEcchhccCeecCcccccccceEEEEecCCCCccccCceEEEeCCH
Confidence 9999999999999999999999999887765554445566666779998778999999986
No 41
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.87 E-value=8.7e-21 Score=173.51 Aligned_cols=229 Identities=15% Similarity=0.112 Sum_probs=159.6
Q ss_pred ccCHHHHHHHHHHHHHHHcCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcC
Q 022564 29 VVDPEIADIIEHEKARQWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR 106 (295)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g 106 (295)
...+..+..+........+.++|..|++. +++.+.+++.+.+.+.. ..|+...+..++++++.+++++++|
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~-------~~Y~~~~G~~~lr~~la~~~~~~~~ 79 (382)
T PRK06108 7 ALPESGIREVANAGRGREGVLPLWFGESDLPTPDFIRDAAAAALADGE-------TFYTHNLGIPELREALARYVSRLHG 79 (382)
T ss_pred hCCchHHHHHHHHHhccCCeEEecCCCCCCCCCHHHHHHHHHHHhcCC-------CCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 34444555555543333467899988873 57889999988775521 1244456678899999999998888
Q ss_pred --CCCCCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCC
Q 022564 107 --LDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYID 183 (295)
Q Consensus 107 --~~~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id 183 (295)
++++ +|++|+|++ ++..++.+++++||+|++++|.|+.+.. .+...|.++..++++.+..++.+|
T Consensus 80 ~~~~~~----~i~~t~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~--------~~~~~g~~~~~v~~~~~~~~~~~d 147 (382)
T PRK06108 80 VATPPE----RIAVTSSGVQALMLAAQALVGPGDEVVAVTPLWPNLVA--------APKILGARVVCVPLDFGGGGWTLD 147 (382)
T ss_pred CCcCcc----eEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchHH--------HHHHCCCEEEEeeCCCCCCCccCC
Confidence 5665 899999999 8777888889999999999976655432 333556556555543222346799
Q ss_pred HHHHHHHHhhcCCcEEEEcCCCCC--C---ccCHHHHHHHHHHcCCEEEEEccccccccc-cCCCCC--CCC---cceEE
Q 022564 184 YDQLEKSATLFRPKLIVAGASAYA--R---LYDYERIRKVCNKQKAIMLADMAHISGLVA-AGVIPS--PFE---YADVV 252 (295)
Q Consensus 184 ~e~l~~~i~~~~tk~i~l~~~n~~--~---~~~l~~I~~ia~~~~~~vivD~a~~~g~~~-~~~~~~--~~~---~~D~~ 252 (295)
++++++.+++ ++++++++.+||| . ..++++|.++|+++|+++|+|+++...... ....+. .+. ...++
T Consensus 148 ~~~l~~~~~~-~~~~i~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~ 226 (382)
T PRK06108 148 LDRLLAAITP-RTRALFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIF 226 (382)
T ss_pred HHHHHHhcCc-cceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEE
Confidence 9999999876 8999999755554 3 335788999999999999999997755432 111110 111 24588
Q ss_pred EeCCCCCCC--CCceEEEEEeCCchhh
Q 022564 253 TTTTHKSLR--GPRGAMIFFRKGVKEI 277 (295)
Q Consensus 253 ~~s~~K~l~--gp~gG~l~~~~~~~~~ 277 (295)
+.|++|.|+ |.+-|++++++++.+.
T Consensus 227 ~~S~SK~~g~~G~RiG~~~~~~~~~~~ 253 (382)
T PRK06108 227 VNSFSKNWAMTGWRLGWLVAPPALGQV 253 (382)
T ss_pred EeechhhccCcccceeeeeCCHHHHHH
Confidence 999999874 3344999998876543
No 42
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.87 E-value=8.7e-21 Score=172.23 Aligned_cols=189 Identities=14% Similarity=0.078 Sum_probs=135.6
Q ss_pred CCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhh
Q 022564 54 SENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTAL 132 (295)
Q Consensus 54 ~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al 132 (295)
|-+++|++++++|.++..+ | ...+++.+++++.+++++|.+ ++++++|++ ++.+++.++
T Consensus 21 g~s~~~~~v~~a~~~~~~~-~-------------~~~~~~~~~~~~~~a~~~g~~------~~~~~~g~t~al~~al~al 80 (363)
T TIGR01437 21 GVSTVSDEVADAQKRGAQN-Y-------------FEIKELVNKTGEYIANLLGVE------DAVIVSSASAGIAQSVAAV 80 (363)
T ss_pred CCCCCCHHHHHHHHHHHhc-C-------------CCHHHHHHHHHHHHHHhhCCC------eEEEEcCHHHHHHHHHHHH
Confidence 4456899999999998654 3 123567778889999999976 356777777 888899999
Q ss_pred cCCCC---------------eEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCc
Q 022564 133 LKPHD---------------RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPK 197 (295)
Q Consensus 133 ~~~gd---------------~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk 197 (295)
+++|| +|+++.+.+..+..+. ...+.+.|... +.++. ++.+|++++++++++ +|+
T Consensus 81 ~~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~----~~~~~~~g~~~--v~v~~---~~~~d~~~le~ai~~-~t~ 150 (363)
T TIGR01437 81 ITRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPV----ETMVRLGGGKV--VEAGY---ANECSAEQLEAAITE-KTA 150 (363)
T ss_pred hcCCCcchhhcccccccccceEEEECccchhcCCch----HHHHHhcCCeE--EEEcC---CCCCCHHHHHHhcCh-hce
Confidence 99998 7776653222221111 11334556544 43333 357999999999987 899
Q ss_pred EEE-EcC-CCC-CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCceEEEEEeCCc
Q 022564 198 LIV-AGA-SAY-ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGV 274 (295)
Q Consensus 198 ~i~-l~~-~n~-~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~gG~l~~~~~~ 274 (295)
+++ +++ +|+ |...|+++|+++|++||+++++|++|+.... ..... ++|++++|+||+|+||++|+++.++++
T Consensus 151 ai~~v~~~~~~~g~~~~~~~i~~~a~~~gi~vivD~a~~~~~~--~~~~~---g~D~~~~S~~K~l~gp~~G~l~~~~~~ 225 (363)
T TIGR01437 151 AILYIKSHHCVQKSMLSVEDAAQVAQEHNLPLIVDAAAEEDLQ--KYYRL---GADLVIYSGAKAIEGPTSGLVLGKKKY 225 (363)
T ss_pred EEEEEecCCCCcCCcCCHHHHHHHHHHcCCeEEEECCCCCchH--HHHHc---CCCEEEEeCCcccCCCceEEEEEcHHH
Confidence 776 453 454 4688999999999999999999999972210 00112 489999999999999999999987765
Q ss_pred hhh
Q 022564 275 KEI 277 (295)
Q Consensus 275 ~~~ 277 (295)
.+.
T Consensus 226 i~~ 228 (363)
T TIGR01437 226 IEW 228 (363)
T ss_pred HHH
Confidence 543
No 43
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.86 E-value=6.1e-21 Score=177.56 Aligned_cols=219 Identities=15% Similarity=0.173 Sum_probs=147.1
Q ss_pred cccCHHHHHHHHHHHHHH----HcCceecCCCC---CCCH----HHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHH
Q 022564 28 EVVDPEIADIIEHEKARQ----WKGLELIPSEN---FTSV----SVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESL 96 (295)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~----~~~i~L~~~~~---~~~~----~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~ 96 (295)
..+.+..+..+.+..+.. .+.++|..+++ +.+| .+.+++.+++... ...|++..+..+++
T Consensus 14 ~~v~~~~~~~~~~~~~~l~~~g~~~~~L~~g~p~~D~~tds~t~a~~~a~~~a~~~g-------~~~Y~~~~g~~~Lr-- 84 (460)
T PRK13238 14 KMVEPIRLTTREERERALAEAGYNPFLLKSEDVFIDLLTDSGTGAMSDRQWAAMMRG-------DEAYAGSRSYYRLE-- 84 (460)
T ss_pred ceeccccccCHHHHHHHHHHcCCCEEeCCCCCCCCCCCCCCCchhhhHHHHHHHHhC-------CcccCCCCCHHHHH--
Confidence 445555554444433322 36789988886 3333 4677777766431 12366667777777
Q ss_pred HHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeec
Q 022564 97 CQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL 175 (295)
Q Consensus 97 ~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 175 (295)
+.++++++.+ .+++|+|++ ++..++.++++||| |+++.+.|..+ ...+...|++...++++.
T Consensus 85 --eaia~~~~~~------~vv~t~ggt~A~~~~~~all~pGD-Vii~~p~~~~~--------~~~i~~~G~~~v~v~~~~ 147 (460)
T PRK13238 85 --DAVKDIFGYP------YTIPTHQGRAAEQILFPVLIKKGD-VVPSNYHFDTT--------RAHIELNGATAVDLVIDE 147 (460)
T ss_pred --HHHHHHhCCC------cEEECCCHHHHHHHHHHHhCCCCC-EEccCCcccch--------HHHHHHcCCEEEEEeccc
Confidence 5677777764 467777777 88878889999999 88887433333 323456776665555421
Q ss_pred C-----CCC--CCCCHHHHHHHHhh---cCCcEEEEcCCCCC---C---ccCHHHHHHHHHHcCCEEEEEcccccccc-c
Q 022564 176 N-----EST--GYIDYDQLEKSATL---FRPKLIVAGASAYA---R---LYDYERIRKVCNKQKAIMLADMAHISGLV-A 238 (295)
Q Consensus 176 ~-----~~~--~~id~e~l~~~i~~---~~tk~i~l~~~n~~---~---~~~l~~I~~ia~~~~~~vivD~a~~~g~~-~ 238 (295)
. .+. +.+|+++|++.+++ .+|++|+++.++|+ . ..++++|.++|++||++||+|+||..+.. .
T Consensus 148 ~~~~~~~~~f~g~id~e~Le~~i~~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f 227 (460)
T PRK13238 148 ALDTGSRHPFKGNFDLEKLEALIEEVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYF 227 (460)
T ss_pred cccccccccccCCcCHHHHHHHHhhcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhh
Confidence 0 012 34999999999984 36899999855553 2 44577999999999999999999865422 1
Q ss_pred c-----CCCCCC--------CCcceEEEeCCCCCCCCCceEEEEEeC
Q 022564 239 A-----GVIPSP--------FEYADVVTTTTHKSLRGPRGAMIFFRK 272 (295)
Q Consensus 239 ~-----~~~~~~--------~~~~D~~~~s~~K~l~gp~gG~l~~~~ 272 (295)
. +..... ...+|++++|++|.+.+|.||++++++
T Consensus 228 ~~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~~~~GG~i~~~d 274 (460)
T PRK13238 228 IKQREPGYKDKSIKEIAREMFSYADGLTMSAKKDAMVNIGGLLCFRD 274 (460)
T ss_pred hhhccccccCCCHHHHhhhhcccCcEEEEecccCCCCcceeEEEcCh
Confidence 1 111111 135899999999999999999999996
No 44
>PLN00175 aminotransferase family protein; Provisional
Probab=99.86 E-value=2.4e-20 Score=172.27 Aligned_cols=232 Identities=15% Similarity=0.112 Sum_probs=165.6
Q ss_pred cCcccccCHHHHHHHHHHHHHHHcCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHH
Q 022564 24 NAPLEVVDPEIADIIEHEKARQWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA 101 (295)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~l 101 (295)
.++++.++++.+..+.+.. ...+.|+|..|.+. +++.+.+++.+.+.+.. ..|+...+..++++++.+++
T Consensus 33 ~~~~~~~~~~~~~~~~~~~-~~~~~i~l~~G~P~~~~~~~~~~~~~~~~~~~~-------~~Y~~~~G~~~Lr~aia~~~ 104 (413)
T PLN00175 33 AKRLEKFKTTIFTQMSSLA-IKHGAINLGQGFPNFDGPDFVKEAAIQAIRDGK-------NQYARGFGVPELNSAIAERF 104 (413)
T ss_pred hHHhhcCCCCHHHHHHHHh-hcCCeEecCCCCCCCCCCHHHHHHHHHHHhcCC-------CCcCCCCCCHHHHHHHHHHH
Confidence 4556677777777776653 33477999888763 57888899888776411 12455567788999999999
Q ss_pred HHHcCC--CCCCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCC
Q 022564 102 LEAFRL--DPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES 178 (295)
Q Consensus 102 a~~~g~--~~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 178 (295)
.+.+|. +++. +|++|+|++ ++..++.++++|||+|++++|.|+.+. ..+...|.++..++ ++++
T Consensus 105 ~~~~g~~~~~~~---~I~vt~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~--------~~~~~~g~~~~~v~--~~~~ 171 (413)
T PLN00175 105 KKDTGLVVDPEK---EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYE--------ATLSMAGAKIKTVT--LRPP 171 (413)
T ss_pred HHHhCCCCCCCC---CEEEeCCHHHHHHHHHHHhCCCCCEEEEeCCCchhHH--------HHHHHcCCEEEEEE--CCcc
Confidence 888785 4432 599999999 877788889999999999995555443 34446676555454 5544
Q ss_pred CCCCCHHHHHHHHhhcCCcEEEEcCCCCC--Cc---cCHHHHHHHHHHcCCEEEEEccccccccccCCCC-CCCC---cc
Q 022564 179 TGYIDYDQLEKSATLFRPKLIVAGASAYA--RL---YDYERIRKVCNKQKAIMLADMAHISGLVAAGVIP-SPFE---YA 249 (295)
Q Consensus 179 ~~~id~e~l~~~i~~~~tk~i~l~~~n~~--~~---~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~-~~~~---~~ 249 (295)
++.+|++++++.+.+ ++|+|+++++||| .. .++++|+++|++|+++||+|+++........... ..+. ..
T Consensus 172 ~~~~~~~~l~~~~~~-~~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~~~~~ 250 (413)
T PLN00175 172 DFAVPEDELKAAFTS-KTRAILINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEGDHISMASLPGMYER 250 (413)
T ss_pred cCCCCHHHHHHhcCc-CceEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCCcccChhhCCCCcCc
Confidence 588999999999977 8999999866664 33 3577899999999999999999764433211100 1111 24
Q ss_pred eEEEeCCCCCCC--CCceEEEEEeCCchhh
Q 022564 250 DVVTTTTHKSLR--GPRGAMIFFRKGVKEI 277 (295)
Q Consensus 250 D~~~~s~~K~l~--gp~gG~l~~~~~~~~~ 277 (295)
.+++.|++|.|+ |.+-|++++++++.+.
T Consensus 251 vi~i~SfSK~~~~~G~RiG~~v~~~~l~~~ 280 (413)
T PLN00175 251 TVTMNSLGKTFSLTGWKIGWAIAPPHLTWG 280 (413)
T ss_pred EEEEecchhhccCcchheeeeEeCHHHHHH
Confidence 588999999885 4455999998876543
No 45
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.86 E-value=3.2e-20 Score=169.05 Aligned_cols=202 Identities=13% Similarity=0.097 Sum_probs=147.3
Q ss_pred eecCCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHH
Q 022564 50 ELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQV 128 (295)
Q Consensus 50 ~L~~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~ 128 (295)
-+++|...+++.++++|.+.... + . ....+..+.+++.+++++|++++. ..|.++++++ ++..+
T Consensus 8 ~~~pgP~~~~~~~~~a~~~~~~~-~-----------~-~~~~~~~~~~~~~l~~l~~~~~~~--~~i~~~~~gt~~l~~~ 72 (368)
T PRK13479 8 LLTPGPLTTSRTVREAMLRDWGS-W-----------D-DDFNALTASVRAKLVAIATGEEGY--TCVPLQGSGTFSVEAA 72 (368)
T ss_pred eecCCCCCCCHHHHHHhCCCCCC-C-----------C-hHHHHHHHHHHHHHHHHhCCCCCc--eEEEEcCCcHHHHHHH
Confidence 45777777899999988764421 1 1 122346667889999999996532 1576766666 88878
Q ss_pred HHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhh-cCCcEEEEcCCCC-
Q 022564 129 YTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL-FRPKLIVAGASAY- 206 (295)
Q Consensus 129 ~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~-~~tk~i~l~~~n~- 206 (295)
+.+++.+||+|++..+.+.+.. . ...+...|.++..++ .+ .++.+|++++++++++ .++++++++.+++
T Consensus 73 ~~~l~~~~~~vlv~~~~~~~~~--~----~~~~~~~g~~~~~i~--~~-~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~ 143 (368)
T PRK13479 73 IGSLVPRDGKVLVPDNGAYGAR--I----AQIAEYLGIAHVVLD--TG-EDEPPDAAEVEAALAADPRITHVALVHCETT 143 (368)
T ss_pred HHhccCCCCeEEEEeCCchHHH--H----HHHHHHcCCcEEEEE--CC-CCCCCCHHHHHHHHHhCCCCcEEEEEcccCc
Confidence 9999999999998874332221 0 112334566566565 33 3467999999999865 2456777774444
Q ss_pred -CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCce-EEEEEeCCchhhh
Q 022564 207 -ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEIN 278 (295)
Q Consensus 207 -~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~~ 278 (295)
|...|+++|.++|+++|+++++|++|++|..+.++.... +|++++|+|||++||.| |+++++++..+..
T Consensus 144 tG~~~~~~~i~~l~~~~~~~livDa~~~~g~~~~~~~~~~---~d~~v~s~~K~l~g~~G~G~l~~~~~~~~~~ 214 (368)
T PRK13479 144 TGILNPLDEIAAVAKRHGKRLIVDAMSSFGAIPIDIAELG---IDALISSANKCIEGVPGFGFVIARRSELEAC 214 (368)
T ss_pred cccccCHHHHHHHHHHcCCEEEEEcccccCCccccccccC---ceEEEecCccccccCCCceEEEECHHHHHHh
Confidence 588999999999999999999999999887766655554 89999999999999999 9999998865543
No 46
>PRK12414 putative aminotransferase; Provisional
Probab=99.86 E-value=2.8e-20 Score=170.36 Aligned_cols=230 Identities=14% Similarity=0.188 Sum_probs=160.7
Q ss_pred cccccCHHHHHHHHHHHHHHHcCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHH
Q 022564 26 PLEVVDPEIADIIEHEKARQWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALE 103 (295)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~ 103 (295)
+++.++..++..+.+. ..+.+.|+|..|++. +++.+.+++.+.+.... ..|+...+..++++++++++++
T Consensus 10 ~~~~~~~~~~~~~~~~-~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~-------~~Y~~~~G~~~lr~~ia~~l~~ 81 (384)
T PRK12414 10 KLPDVGTTIFTVIGQL-AAQHDALNLSQGAPNFAPDPALVEGVARAMRDGH-------NQYAPMAGIAALREALAEKTER 81 (384)
T ss_pred hcccCCccHHHHHHHH-HHhCCeEEcCCCCCCCCCCHHHHHHHHHHHHhCC-------CCcCCCCCcHHHHHHHHHHHHH
Confidence 3445555566655443 344567999888774 47888888887665421 1244556678899999999999
Q ss_pred HcCCC--CCCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCC
Q 022564 104 AFRLD--PEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTG 180 (295)
Q Consensus 104 ~~g~~--~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~ 180 (295)
++|++ +++ +|++|+|++ ++..++.+++++||+|+++++.|..+.. .+...|.++..+ +++.+++
T Consensus 82 ~~g~~~~~~~---~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~--------~~~~~g~~~~~v--~~~~~~~ 148 (384)
T PRK12414 82 LYGARYDPAS---EVTVIASASEGLYAAISALVHPGDEVIYFEPSFDSYAP--------IVRLQGATPVAI--KLSPEDF 148 (384)
T ss_pred HhCCCCCCCC---cEEEECChHHHHHHHHHHhcCCCCEEEEeCCCccchHH--------HHHHcCCEEEEE--ecCcccc
Confidence 99984 321 699999998 7777888999999999999976655422 333456545444 4554467
Q ss_pred CCCHHHHHHHHhhcCCcEEEEcCCCCC--C---ccCHHHHHHHHHHcCCEEEEEccccccccccCCC----CCC-CCcce
Q 022564 181 YIDYDQLEKSATLFRPKLIVAGASAYA--R---LYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI----PSP-FEYAD 250 (295)
Q Consensus 181 ~id~e~l~~~i~~~~tk~i~l~~~n~~--~---~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~----~~~-~~~~D 250 (295)
.+|++++++++++ ++++|+++++||| . ..++++|.++|++||+++|+|+++.......... ..+ +...-
T Consensus 149 ~~d~~~l~~~l~~-~~~~v~i~~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~ 227 (384)
T PRK12414 149 RVNWDEVAAAITP-RTRMIIVNTPHNPSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERS 227 (384)
T ss_pred ccCHHHHHhhcCc-ccEEEEEcCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcE
Confidence 8999999999976 8999999866664 3 3578899999999999999999976433221111 001 11234
Q ss_pred EEEeCCCCCCC--CCceEEEEEeCCchhh
Q 022564 251 VVTTTTHKSLR--GPRGAMIFFRKGVKEI 277 (295)
Q Consensus 251 ~~~~s~~K~l~--gp~gG~l~~~~~~~~~ 277 (295)
+++.|++|.|+ |.+-|++++++++.+.
T Consensus 228 i~~~SfSK~~~~pGlRiG~~v~~~~l~~~ 256 (384)
T PRK12414 228 VIVSSFGKSYHVTGWRVGYCLAPAELMDE 256 (384)
T ss_pred EEEecccccccCccceEEEEecCHHHHHH
Confidence 88999999874 4445999998876553
No 47
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.86 E-value=2.3e-20 Score=172.00 Aligned_cols=198 Identities=10% Similarity=0.032 Sum_probs=143.7
Q ss_pred CCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCC-C-CCcceeEEeCCChH-HHHHHHHhh
Q 022564 56 NFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLD-P-EKWGVNVQSLSGSP-SNFQVYTAL 132 (295)
Q Consensus 56 ~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~-~-~~~~~~v~~~sG~~-a~~~~~~al 132 (295)
.++.|++.+.|...+...+ +++.. . ....++++.+++++++++|++ + ++ .-..+|||++ ++..++.+.
T Consensus 51 t~~~p~~~~~~~~~l~~~~--~np~s--~---~~~~~le~~~~~~la~llg~~~~~~~--~~g~~TsGgTEAn~~al~~a 121 (431)
T TIGR01788 51 TWMEPEARKLMDETINKNM--IDKDE--Y---PQTAEIENRCVNMLADLWHAPAKDAE--AVGTSTIGSSEAIMLGGLAM 121 (431)
T ss_pred CCCCHHHHHHHHHHHhcCC--CCccc--C---ccHHHHHHHHHHHHHHHhCCCCCCCC--CeEEEechHHHHHHHHHHHH
Confidence 4567889999988886534 44433 1 223389999999999999997 3 32 1223478888 877666544
Q ss_pred c--------CC-----CCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEE
Q 022564 133 L--------KP-----HDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLI 199 (295)
Q Consensus 133 ~--------~~-----gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i 199 (295)
. .. .-.|+++..+|.++.... ...|.++..++ ++++++.+|+++|++++++ +|.+|
T Consensus 122 r~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~ka~--------~~lg~~v~~i~--~d~~~~~vd~~~L~~~i~~-~t~lV 190 (431)
T TIGR01788 122 KWRWRKRMEAAGKPTDKPNLVMGSNVQVCWEKFA--------RYFDVELREVP--MDPGRYVIDPEQVVEAVDE-NTIGV 190 (431)
T ss_pred HHHHHHHHHhcCCCCCCcEEEEcCcchHHHHHHH--------HHcCceeEEEe--cCCCceeeCHHHHHHHHhh-CCeEE
Confidence 2 11 236999998888886533 24454455555 5533468999999999987 88888
Q ss_pred EEc--CCCCCCccCHHHHHHHHHHc------CCEEEEEccccccccccCCCCC----CCCcceEEEeCCCCCCCCCce-E
Q 022564 200 VAG--ASAYARLYDYERIRKVCNKQ------KAIMLADMAHISGLVAAGVIPS----PFEYADVVTTTTHKSLRGPRG-A 266 (295)
Q Consensus 200 ~l~--~~n~~~~~~l~~I~~ia~~~------~~~vivD~a~~~g~~~~~~~~~----~~~~~D~~~~s~~K~l~gp~g-G 266 (295)
+++ ++..|.++|+++|+++|+++ |+++++|+||+.+..+...... ...++|.+++|+|||+.||.| |
T Consensus 191 ~~t~g~t~tG~idpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~~~~~DSis~s~HK~~~~P~g~G 270 (431)
T TIGR01788 191 VCILGTTYTGEYEDVKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFRLPRVKSINVSGHKYGLVYPGVG 270 (431)
T ss_pred EEEeCCCCCcccCCHHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcCCCCceEEEECchhccCCCCCcE
Confidence 876 33337999999999999999 9999999999966654322211 123699999999999889999 9
Q ss_pred EEEEeCC
Q 022564 267 MIFFRKG 273 (295)
Q Consensus 267 ~l~~~~~ 273 (295)
++++|++
T Consensus 271 ~l~~r~~ 277 (431)
T TIGR01788 271 WVIWRDE 277 (431)
T ss_pred EEEEeCh
Confidence 9999986
No 48
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.86 E-value=3e-21 Score=170.56 Aligned_cols=167 Identities=22% Similarity=0.198 Sum_probs=126.1
Q ss_pred HHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEe
Q 022564 94 ESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMP 172 (295)
Q Consensus 94 ~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~ 172 (295)
.+++++.+++++|.+. .+++++|++ ++.+++.+++++||+|++..+.|.++.... ...|.....++
T Consensus 61 i~~~~~~~A~~~ga~~-----~~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~~~~--------~~~g~~~~~v~ 127 (294)
T cd00615 61 IKEAQELAARAFGAKH-----TFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVINGL--------VLSGAVPVYLK 127 (294)
T ss_pred HHHHHHHHHHHhCCCC-----EEEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHHHHH--------HHCCCEEEEec
Confidence 3446688999999864 566688888 888888999999999999998888775432 34565555554
Q ss_pred eecCCC---CCCCCHHHHHHHHhh-cCCcEEEEcCCCC-CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCC-C
Q 022564 173 YRLNES---TGYIDYDQLEKSATL-FRPKLIVAGASAY-ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP-F 246 (295)
Q Consensus 173 ~~~~~~---~~~id~e~l~~~i~~-~~tk~i~l~~~n~-~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~-~ 246 (295)
.+.+.+ .+.+|++++++++++ .++++++++.+|+ |...|+++|.++|+++|+++++|+||+......+..+.. .
T Consensus 128 ~~~~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p~~~G~~~dl~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~~~ 207 (294)
T cd00615 128 PERNPYYGIAGGIPPETFKKALIEHPDAKAAVITNPTYYGICYNLRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSSAA 207 (294)
T ss_pred CccCcccCcCCCCCHHHHHHHHHhCCCceEEEEECCCCCCEecCHHHHHHHHHhcCCeEEEECcchhhhccCcccCcchh
Confidence 333311 137899999999974 3689999986666 688899999999999999999999998654322221111 1
Q ss_pred -CcceEEEeCCCCCCCCCce-EEEEEeCC
Q 022564 247 -EYADVVTTTTHKSLRGPRG-AMIFFRKG 273 (295)
Q Consensus 247 -~~~D~~~~s~~K~l~gp~g-G~l~~~~~ 273 (295)
.++|+++.|+||+++||++ |++.++++
T Consensus 208 ~~~~div~~S~hK~l~g~~~~~~l~~~~~ 236 (294)
T cd00615 208 MAGADIVVQSTHKTLPALTQGSMIHVKGD 236 (294)
T ss_pred hcCCcEEEEchhcccchHhHHHHHHhCCC
Confidence 2599999999999999876 88888766
No 49
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.85 E-value=2.9e-20 Score=165.99 Aligned_cols=208 Identities=17% Similarity=0.148 Sum_probs=162.7
Q ss_pred ceecCCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHH
Q 022564 49 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQV 128 (295)
Q Consensus 49 i~L~~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~ 128 (295)
+-|.+|...+++.|+++|.+....++ ++....+.+.+.+.++..|+.+..+ +-++.+||+.++.++
T Consensus 7 ~Ll~PGP~~v~~~V~~am~~~~~~h~------------s~~F~~~~~~~~~~L~~v~~t~~~~--~~ll~gsGt~amEAa 72 (383)
T COG0075 7 LLLTPGPVPVPPRVLLAMARPMVGHR------------SPDFVGIMKEVLEKLRKVFGTENGD--VVLLSGSGTLAMEAA 72 (383)
T ss_pred eeeeCCCCCCCHHHHHHhcCCCCCCC------------CHHHHHHHHHHHHHHHHHhcCCCCc--EEEEcCCcHHHHHHH
Confidence 56788998999999999987654422 1344566677889999999987421 344445666688889
Q ss_pred HHhhcCCCCeEEEecCCCCcccCcccccc--ccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhh-cCCcEEEE--cC
Q 022564 129 YTALLKPHDRIMALDLPHGGHLSHGYQTD--TKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL-FRPKLIVA--GA 203 (295)
Q Consensus 129 ~~al~~~gd~Vl~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~-~~tk~i~l--~~ 203 (295)
+..+++|||+||+.. .+.+-. .+.++..|.++..+..+ .+..+|++++++++++ .+.++|.+ |.
T Consensus 73 v~sl~~pgdkVLv~~--------nG~FG~R~~~ia~~~g~~v~~~~~~---wg~~v~p~~v~~~L~~~~~~~~V~~vH~E 141 (383)
T COG0075 73 VASLVEPGDKVLVVV--------NGKFGERFAEIAERYGAEVVVLEVE---WGEAVDPEEVEEALDKDPDIKAVAVVHNE 141 (383)
T ss_pred HHhccCCCCeEEEEe--------CChHHHHHHHHHHHhCCceEEEeCC---CCCCCCHHHHHHHHhcCCCccEEEEEecc
Confidence 999999999999988 333222 13455667666665433 3458999999999984 24667766 36
Q ss_pred CCCCCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCce-EEEEEeCCchhhhccCC
Q 022564 204 SAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGK 282 (295)
Q Consensus 204 ~n~~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~~~~~~ 282 (295)
+..|...|+++|+++|++||.++|+|+..++|..+.+...++ +|+++++++|+|.+|+| |++.++++..+......
T Consensus 142 TSTGvlnpl~~I~~~~k~~g~l~iVDaVsS~Gg~~~~vd~wg---iDv~itgSQK~l~~PPGla~v~~S~~a~e~~~~~~ 218 (383)
T COG0075 142 TSTGVLNPLKEIAKAAKEHGALLIVDAVSSLGGEPLKVDEWG---IDVAITGSQKALGAPPGLAFVAVSERALEAIEERK 218 (383)
T ss_pred CcccccCcHHHHHHHHHHcCCEEEEEecccCCCcccchhhcC---ccEEEecCchhccCCCccceeEECHHHHHHHhcCC
Confidence 666888999999999999999999999999999999998888 99999999999999999 99999999887765554
Q ss_pred ee
Q 022564 283 EF 284 (295)
Q Consensus 283 ~~ 284 (295)
..
T Consensus 219 ~~ 220 (383)
T COG0075 219 HP 220 (383)
T ss_pred CC
Confidence 44
No 50
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.85 E-value=2.8e-20 Score=170.87 Aligned_cols=209 Identities=18% Similarity=0.202 Sum_probs=149.8
Q ss_pred HcCceecCCCC---CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCCh
Q 022564 46 WKGLELIPSEN---FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 122 (295)
Q Consensus 46 ~~~i~L~~~~~---~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~ 122 (295)
++.|++..++. .++|++++++.+.+.. +..+++++++..+. ..+..++++.+++++|.+. .+++++|+
T Consensus 38 ~~~i~~~~~~~lg~~~~~~v~~~~~~~~~~-~~~~~~~s~~~~G~---~~~~~~le~~ia~~~g~~~-----~ii~~~~~ 108 (393)
T TIGR01822 38 REVLNFCANNYLGLSSHPDLIQAAKDALDE-HGFGMSSVRFICGT---QDIHKELEAKIAAFLGTED-----TILYASCF 108 (393)
T ss_pred ceEEEeeCCCccccCCCHHHHHHHHHHHHH-hCCCCCCcCcccCC---hHHHHHHHHHHHHHhCCCc-----EEEECchH
Confidence 35688887764 2588999999998876 32366666554442 3334456689999999863 67776666
Q ss_pred HHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhh---c--CCc
Q 022564 123 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL---F--RPK 197 (295)
Q Consensus 123 ~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~---~--~tk 197 (295)
.++..++.+++++||+|++.++.|+++.... ...+... +. . ..+|++++++.+++ . +|+
T Consensus 109 ~a~~~~~~~l~~~gd~vi~~~~~~~s~~~~~--------~~~~~~~--~~--~----~~~d~~~l~~~i~~~~~~~~~~~ 172 (393)
T TIGR01822 109 DANGGLFETLLGAEDAIISDALNHASIIDGV--------RLCKAKR--YR--Y----ANNDMADLEAQLKEARAAGARHR 172 (393)
T ss_pred HHHHHHHHHhCCCCCEEEEeccccHHHHHHH--------HhcCCce--EE--e----CCCCHHHHHHHHHhhhhcCCCce
Confidence 5877788889999999999998888765422 2333222 22 1 14789999998874 2 577
Q ss_pred EEEEc-CCCC-CCccCHHHHHHHHHHcCCEEEEEccccccccccCCC----CCCC-CcceEEEeCCCCCCCCCceEEEEE
Q 022564 198 LIVAG-ASAY-ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI----PSPF-EYADVVTTTTHKSLRGPRGAMIFF 270 (295)
Q Consensus 198 ~i~l~-~~n~-~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~----~~~~-~~~D~~~~s~~K~l~gp~gG~l~~ 270 (295)
+|+++ ..|+ |...|+++|.++|++||+++++|++|+.|....... ..++ ..+|++++|+||+++|+++|++++
T Consensus 173 ~v~~~~v~~~tG~~~~l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~di~~~s~sK~l~g~r~G~~~~ 252 (393)
T TIGR01822 173 LIATDGVFSMDGVIAPLDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVMGRVDIITGTLGKALGGASGGFTTA 252 (393)
T ss_pred EEEEeCCccCCCCcCCHHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCCCCCeEEEEEChHHhhCCCcEEEEe
Confidence 77775 3333 678899999999999999999999998776542210 1111 148999999999999999999999
Q ss_pred eCCchhhhc
Q 022564 271 RKGVKEINK 279 (295)
Q Consensus 271 ~~~~~~~~~ 279 (295)
++++.+...
T Consensus 253 ~~~~~~~l~ 261 (393)
T TIGR01822 253 RKEVVELLR 261 (393)
T ss_pred CHHHHHHHH
Confidence 888766543
No 51
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.85 E-value=2.8e-20 Score=162.26 Aligned_cols=197 Identities=19% Similarity=0.197 Sum_probs=145.8
Q ss_pred CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhhcCC
Q 022564 57 FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKP 135 (295)
Q Consensus 57 ~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al~~~ 135 (295)
.++|++++|+.+.+.+. -.||+. ..+++.+++.+|.++.++.+..+ ..|+++.|.- ++..+++++.++
T Consensus 38 ~~pp~i~~Al~~rvdhG-vfGY~~--------~~~~~~~ai~~w~~~r~~~~i~~--e~i~~~p~VVpgi~~~I~~~T~~ 106 (388)
T COG1168 38 PTPPEIIEALRERVDHG-VFGYPY--------GSDELYAAIAHWFKQRHQWEIKP--EWIVFVPGVVPGISLAIRALTKP 106 (388)
T ss_pred CCCHHHHHHHHHHHhcC-CCCCCC--------CCHHHHHHHHHHHHHhcCCCCCc--ceEEEcCcchHhHHHHHHHhCcC
Confidence 57999999999998774 125553 22457777889999999884332 2699999988 888899999999
Q ss_pred CCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC-----Ccc
Q 022564 136 HDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYA-----RLY 210 (295)
Q Consensus 136 gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~~-----~~~ 210 (295)
||.|++..|.|+.++. .+...|+++...|+..+...+.+|+++||+++.+.++|++++|+|+|| +..
T Consensus 107 gd~Vvi~tPvY~PF~~--------~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLCnPHNP~Grvwt~e 178 (388)
T COG1168 107 GDGVVIQTPVYPPFYN--------AIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFILCNPHNPTGRVWTKE 178 (388)
T ss_pred CCeeEecCCCchHHHH--------HHhhcCcEEEeccccccCCcEEecHHHHHHHHhcCCccEEEEeCCCCCCCccccHH
Confidence 9999999966665544 455777777666654443455789999999998767899999966664 566
Q ss_pred CHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCC-----cce--EEEeCCCCCCC--CCceEEEEEeCC
Q 022564 211 DYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE-----YAD--VVTTTTHKSLR--GPRGAMIFFRKG 273 (295)
Q Consensus 211 ~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~-----~~D--~~~~s~~K~l~--gp~gG~l~~~~~ 273 (295)
+|.+|++||++||+.||+|+.|+--.+. +..+.++. .+| +++.|++|+|+ |-..+.+++.++
T Consensus 179 eL~~i~elc~kh~v~VISDEIHaDlv~~-g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~ 249 (388)
T COG1168 179 ELRKIAELCLRHGVRVISDEIHADLVLG-GHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNR 249 (388)
T ss_pred HHHHHHHHHHHcCCEEEeeccccccccc-CCCccchhhcChhhhcceEEEeeccccccchhhhheeEEecCH
Confidence 7889999999999999999999744333 32332322 234 77899999985 444466666654
No 52
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.85 E-value=1.4e-20 Score=171.58 Aligned_cols=209 Identities=17% Similarity=0.182 Sum_probs=143.9
Q ss_pred HcCceecCCC--CCCCHHHHHHHhhhhhccCCCCCCCCcccCCcc--hHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCC
Q 022564 46 WKGLELIPSE--NFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNE--YIDMAESLCQKRALEAFRLDPEKWGVNVQSLSG 121 (295)
Q Consensus 46 ~~~i~L~~~~--~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~--~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG 121 (295)
+..|||++-+ +.+...+.+++.++-. ++.+++.-++.. ........+++.+++++|++. .++ ++|
T Consensus 6 ~~~~~~~~~~~~g~~~~~~~~a~~~~~~-----~~~~~~~~~g~~~~~~~~~~~~~~e~lA~~~g~~~-----~~i-~~g 74 (370)
T TIGR02539 6 RGSINLNPLQRGGVLTEAARKALVEFGD-----GYSVCDFCGGRLDQITKPPIHDFLEDLAEFLGMDE-----ARV-THG 74 (370)
T ss_pred ccccccChhhhCCCCcHHHHHHHHHHhh-----ccccccccccccccccchHHHHHHHHHHHHhCCCc-----eEE-ECC
Confidence 4567886543 3567777777766533 222222212211 111122234577999999975 333 466
Q ss_pred hH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCC-CCCCCCHHHHHHHHhh------
Q 022564 122 SP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE-STGYIDYDQLEKSATL------ 193 (295)
Q Consensus 122 ~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~id~e~l~~~i~~------ 193 (295)
++ ++..++.+++++||.|++..+.|.+.+. ++...|.++..++ .+. +++.+|++++++++++
T Consensus 75 ~~~a~~~~~~~l~~~gd~Vl~~~~~h~s~~~--------~~~~~g~~~~~~~--~~~~~~~~~d~~~l~~~l~~~~~~~~ 144 (370)
T TIGR02539 75 AREGKFAVMHALCKEGDWVVLDGLAHYTSYV--------AAERAGLNVKEVP--HTGHPEYKVDPEGYGEVIEEVEDESG 144 (370)
T ss_pred hHHHHHHHHHHhhCCCCEEEECCcccHHHHH--------HHHHcCCEEEEEe--cCCcccCCcCHHHHHHHHHHhhhccC
Confidence 66 8888899999999999998877755532 3345676665555 331 3578999999999863
Q ss_pred cCCcEEEEcCCCC--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCce-EEEEE
Q 022564 194 FRPKLIVAGASAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFF 270 (295)
Q Consensus 194 ~~tk~i~l~~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~ 270 (295)
.++++|+++.+++ |...|+++|.++|+++|+++++|++|+.|..+...... ++|+++.|+||+++++.+ |++++
T Consensus 145 ~~~~lv~~~~p~~~~G~~~~l~~i~~la~~~~~~livDea~~~g~~~~~~~~~---~~di~v~s~sK~~~~~g~~G~l~~ 221 (370)
T TIGR02539 145 KPPVLALLTHVDGEYGNLPDAGKVAKVCREKGVPLLLNCAYTVGRMPVSAKEI---GADFIVGSGHKSMAASGPCGVLGM 221 (370)
T ss_pred CCcEEEEEECCCCCCccccCHHHHHHHHHHcCCeEEEECccccCCcCCCHHHc---CCCEEEeeCcccccCCCCEEEEEE
Confidence 2678888875544 58999999999999999999999999988544333222 389999999999975444 99999
Q ss_pred eCCchhhh
Q 022564 271 RKGVKEIN 278 (295)
Q Consensus 271 ~~~~~~~~ 278 (295)
++++.+..
T Consensus 222 ~~~~i~~l 229 (370)
T TIGR02539 222 SEEWEDIV 229 (370)
T ss_pred CHHHHhhh
Confidence 98876643
No 53
>PRK08960 hypothetical protein; Provisional
Probab=99.85 E-value=8.3e-20 Score=167.45 Aligned_cols=229 Identities=11% Similarity=0.029 Sum_probs=157.1
Q ss_pred CcccccCHHHHHHHHHHHHHH----HcCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHH
Q 022564 25 APLEVVDPEIADIIEHEKARQ----WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQ 98 (295)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~----~~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~ 98 (295)
++++.+.++.+..+.+..+.. .+.++|..|++. +++.+.+++.+.+.+.. .+ |....+..++++++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~-~~------Y~~~~g~~~lr~~ia 79 (387)
T PRK08960 7 RRSRDIEPFHVMALLARANELEAAGHDVIHLEIGEPDFTTAEPIVAAGQAALAAGH-TR------YTAARGLPALREAIA 79 (387)
T ss_pred hHHHhCCchHHHHHHHHHHHHHhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhcCC-Cc------cCCCCCCHHHHHHHH
Confidence 344455566666655544332 356899888874 58899999998876421 11 333456678888888
Q ss_pred HHHHHHcCC--CCCCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeec
Q 022564 99 KRALEAFRL--DPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL 175 (295)
Q Consensus 99 ~~la~~~g~--~~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 175 (295)
+++.+.+|. +++ +|++|+|++ ++..++.+++++||+|++++|.|+++.... ...|.++..++ +
T Consensus 80 ~~~~~~~g~~~~~~----~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~--------~~~g~~~~~v~--~ 145 (387)
T PRK08960 80 GFYAQRYGVDVDPE----RILVTPGGSGALLLASSLLVDPGKHWLLADPGYPCNRHFL--------RLVEGAAQLVP--V 145 (387)
T ss_pred HHHHHHhCCCCChh----hEEEccCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH--------HhcCCeEEEEe--c
Confidence 888776664 555 899999999 877788888999999999998777765422 24455555555 4
Q ss_pred CC-CCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccC---HHHHHHHHHHcCCEEEEEccccccccccCCCCC--CCC
Q 022564 176 NE-STGYIDYDQLEKSATLFRPKLIVAGASAYA--RLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPS--PFE 247 (295)
Q Consensus 176 ~~-~~~~id~e~l~~~i~~~~tk~i~l~~~n~~--~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~--~~~ 247 (295)
+. .++.+|++++++++++ ++++++++.+||| ...+ +++|+++|++||+++|+|+++..- ...+.... ...
T Consensus 146 ~~~~~~~~d~~~l~~~~~~-~~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~-~~~~~~~~~~~~~ 223 (387)
T PRK08960 146 GPDSRYQLTPALVERHWNA-DTVGALVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGL-TYGVDAASVLEVD 223 (387)
T ss_pred CcccCCCCCHHHHHHHhCc-cceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEcccccc-ccCCCCCChhhcc
Confidence 42 2468999999999876 7888888755553 4444 667788899999999999996432 21111111 111
Q ss_pred cceEEEeCCCCCCC--CCceEEEEEeCCchh
Q 022564 248 YADVVTTTTHKSLR--GPRGAMIFFRKGVKE 276 (295)
Q Consensus 248 ~~D~~~~s~~K~l~--gp~gG~l~~~~~~~~ 276 (295)
..-+++.|++|.++ |.+.|++++++++.+
T Consensus 224 ~~vi~~~S~SK~~g~~GlRiG~~~~~~~~~~ 254 (387)
T PRK08960 224 DDAFVLNSFSKYFGMTGWRLGWLVAPPAAVP 254 (387)
T ss_pred CCEEEEeecccccCCcccEEEEEEcCHHHHH
Confidence 13378899999874 444599999887654
No 54
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.85 E-value=4.5e-20 Score=175.07 Aligned_cols=225 Identities=19% Similarity=0.143 Sum_probs=156.3
Q ss_pred ccCcccccCHHHHHHHHHHHHHH----HcCceecCCCC-----CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHH
Q 022564 23 LNAPLEVVDPEIADIIEHEKARQ----WKGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMA 93 (295)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~----~~~i~L~~~~~-----~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l 93 (295)
.++++.++.+++...+.....+. .+.|+|..|++ .+|+.+++++.+.+... .+ |+...+..++
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~G~p~~~~~~~p~~~~~~~~~~~~~~--~~------Y~~~~G~~~l 190 (517)
T PRK13355 119 KSHKLDNVLYDVRGPVVDEANRMEAAGTHILKLNIGNPAPFGFRTPDEVVYDMAQQLTDT--EG------YSDSKGLFSA 190 (517)
T ss_pred hhHHhhccCccHHHHHHHHHHHHHHcCCCeEEecCcCCCcCCCCCCHHHHHHHHHHhhcC--CC------CCCCcChHHH
Confidence 46667777777776555544333 36799988665 24888999998876431 12 4455667888
Q ss_pred HHHHHHHHHHHcC--CCCCCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEE
Q 022564 94 ESLCQKRALEAFR--LDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFET 170 (295)
Q Consensus 94 ~~~~~~~la~~~g--~~~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 170 (295)
++++.+++.+..+ ++++ +|++|+|++ ++..++.+++++||+|++++|.|+.+ ...+...|..+..
T Consensus 191 Reaia~~~~~~~~~~~~~~----~I~it~G~~eal~~~~~~l~~~Gd~Vli~~P~y~~y--------~~~~~~~g~~~v~ 258 (517)
T PRK13355 191 RKAIMQYAQLKGLPNVDVD----DIYTGNGVSELINLSMSALLDDGDEVLIPSPDYPLW--------TACVNLAGGTAVH 258 (517)
T ss_pred HHHHHHHHHhcCCCCCChh----HEEEeCcHHHHHHHHHHHhCCCCCEEEEcCCCCcCH--------HHHHHHCCCEEEE
Confidence 8887777766553 5665 899999999 77778889999999999999655544 3344466755544
Q ss_pred EeeecCC-CCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccC---HHHHHHHHHHcCCEEEEEccccccccccCCCCC
Q 022564 171 MPYRLNE-STGYIDYDQLEKSATLFRPKLIVAGASAYA--RLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPS 244 (295)
Q Consensus 171 v~~~~~~-~~~~id~e~l~~~i~~~~tk~i~l~~~n~~--~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~ 244 (295)
++ +++ +++.+|++++++++++ ++|+|++++|||| ...+ +++|+++|++||++||+|+++..-.. .+....
T Consensus 259 ~~--~~~~~~~~~d~~~l~~~~~~-~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~-~~~~~~ 334 (517)
T PRK13355 259 YR--CDEQSEWYPDIDDIRSKITS-RTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVM-DGLEHT 334 (517)
T ss_pred ee--cCcccCCCCCHHHHHHhcCc-CceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcC-CCCCcc
Confidence 44 443 3578999999999977 8999999866664 4454 88999999999999999999653222 111111
Q ss_pred CCC--cce---EEEeCCCCCC--CCCceEEEEEe
Q 022564 245 PFE--YAD---VVTTTTHKSL--RGPRGAMIFFR 271 (295)
Q Consensus 245 ~~~--~~D---~~~~s~~K~l--~gp~gG~l~~~ 271 (295)
.+. ..| +.+.|++|.+ .|.+-|++++.
T Consensus 335 s~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~i~~ 368 (517)
T PRK13355 335 SIASLAPDLFCVTFSGLSKSHMIAGYRIGWMILS 368 (517)
T ss_pred cHHHhCCCCeEEEEecchhhccCcccceEEEEee
Confidence 110 112 3358999986 56667999854
No 55
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.85 E-value=5.6e-20 Score=169.04 Aligned_cols=175 Identities=14% Similarity=0.109 Sum_probs=127.0
Q ss_pred chHHHHHHHHHHHHHHHcCCCCCCcceeEEeCC-ChH-HHHHHHHhhcCC--CCeEEEecCCCCcccCcccccccccccc
Q 022564 88 EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLS-GSP-SNFQVYTALLKP--HDRIMALDLPHGGHLSHGYQTDTKKISA 163 (295)
Q Consensus 88 ~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~s-G~~-a~~~~~~al~~~--gd~Vl~~~~~~~~~~~~~~~~~~~~~~~ 163 (295)
.+..++++++++++++++|++.+ ++.+++ |++ ++.+++.+++.+ ||+|+++++.|+++...+..... .
T Consensus 60 ~g~~~~~~~~~~~la~~~g~~~~----~v~~~~~g~~~~~~~~~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~----~ 131 (398)
T cd00613 60 QGRLQALFELQTMLCELTGMDVA----NASLQDEATAAAEAAGLAAIRAYHKRNKVLVPDSAHPTNPAVARTRGE----P 131 (398)
T ss_pred hhHHHHHHHHHHHHHHHHCCCcc----ceeccCchHHHHHHHHHHHHhcccCCCEEEEcCccCcchHHHHHHhcc----c
Confidence 45678888999999999999765 444444 555 555455566666 99999999999888654432111 1
Q ss_pred ceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCC-CCccCH-HHHHHHHHHcCCEEEEEccccccccccCC
Q 022564 164 VSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY-ARLYDY-ERIRKVCNKQKAIMLADMAHISGLVAAGV 241 (295)
Q Consensus 164 ~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~-~~~~~l-~~I~~ia~~~~~~vivD~a~~~g~~~~~~ 241 (295)
.|.++..++ .+ +++.+|++++++++.+ +|++|+++.+++ |...++ ++|+++|++||+++|+|++|+.+......
T Consensus 132 ~g~~~~~v~--~~-~~~~~d~~~l~~~i~~-~t~~viv~~~~~~G~~~~~l~~i~~la~~~g~~livD~~~~~~~~~~~~ 207 (398)
T cd00613 132 LGIEVVEVP--SD-EGGTVDLEALKEEVSE-EVAALMVQYPNTLGVFEDLIKEIADIAHSAGALVYVDGDNLNLTGLKPP 207 (398)
T ss_pred CCcEEEEec--cC-CCCCcCHHHHHHhcCC-CeEEEEEECCCCCceecchHHHHHHHHHhcCCEEEEEeccccccCCCCh
Confidence 124454454 43 3568899999999977 899999875444 566675 99999999999999999998776644333
Q ss_pred CCCCCCcceEEEeCCCCCC-----CCCceEEEEEeCCchhh
Q 022564 242 IPSPFEYADVVTTTTHKSL-----RGPRGAMIFFRKGVKEI 277 (295)
Q Consensus 242 ~~~~~~~~D~~~~s~~K~l-----~gp~gG~l~~~~~~~~~ 277 (295)
... ++|++++|+|||+ +||.+|++++++++.+.
T Consensus 208 ~~~---~~d~~~~s~~K~~~p~g~Ggp~~g~l~~~~~~~~~ 245 (398)
T cd00613 208 GEY---GADIVVGNLQKTGVPHGGGGPGAGFFAVKKELVRF 245 (398)
T ss_pred HHc---CCCEEEeeccccCCCCCCCCCceeEEEEhhhhHhh
Confidence 333 4999999999998 23556999999876553
No 56
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.85 E-value=9.1e-20 Score=167.22 Aligned_cols=233 Identities=16% Similarity=0.162 Sum_probs=156.9
Q ss_pred CcccccCHHHHHHHHHHHHH----HHcCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHH
Q 022564 25 APLEVVDPEIADIIEHEKAR----QWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQ 98 (295)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~----~~~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~ 98 (295)
+++..+.+..+..+.+.... ..+.++|..+++. +++.+.+++.+.+..... ..|+...+..++++++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~------~~Y~~~~G~~~lr~aia 78 (388)
T PRK07366 5 QRLQPLQSNVFADMDRAKAQARAAGKELIDLSLGSSDLPAPAHALEAIAQSLHDPST------HGYLLFHGTLDFREAAA 78 (388)
T ss_pred hhhhcCCccHHHHHHHHHHHHHhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhCccc------CCCCCCCCCHHHHHHHH
Confidence 34455556565544443322 2356899888873 578899998877643111 12344456678888888
Q ss_pred HHHHHHcCC--CCCCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeec
Q 022564 99 KRALEAFRL--DPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL 175 (295)
Q Consensus 99 ~~la~~~g~--~~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 175 (295)
+++.+.+|. +++. +|++|+|++ ++..++.+++++||+|++++|.|+.+. ..+...|.++..++ +
T Consensus 79 ~~~~~~~g~~~~~~~---~I~it~Gs~~al~~~~~~l~~~gd~Vlv~~P~y~~~~--------~~~~~~g~~~~~v~--~ 145 (388)
T PRK07366 79 QWYEQRFGLAVDPET---EVLPLIGSQEGTAHLPLAVLNPGDFALLLDPGYPSHA--------GGVYLAGGQIYPMP--L 145 (388)
T ss_pred HHHHHhhCCcCCCcC---eEEECCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchH--------HHHHhcCCEEEEEE--C
Confidence 888877774 5541 599999999 887788889999999999995555543 34446676665555 4
Q ss_pred CC-CCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--C---ccCHHHHHHHHHHcCCEEEEEccccccccccCC-CCC--CC
Q 022564 176 NE-STGYIDYDQLEKSATLFRPKLIVAGASAYA--R---LYDYERIRKVCNKQKAIMLADMAHISGLVAAGV-IPS--PF 246 (295)
Q Consensus 176 ~~-~~~~id~e~l~~~i~~~~tk~i~l~~~n~~--~---~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~-~~~--~~ 246 (295)
+. +++.+|++++++.+.+ ++|+++++++||| . ...+++|+++|++||++||+|+++..-...... .+. .+
T Consensus 146 ~~~~~~~~d~~~l~~~~~~-~~k~i~l~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~ 224 (388)
T PRK07366 146 RAENDFLPVFADIPTEVLA-QARLMVLSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQA 224 (388)
T ss_pred CCccCCCCCHHHHHHhhcc-cceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhC
Confidence 43 3467899999888766 7999999866664 3 345668888999999999999996533222111 110 11
Q ss_pred C-c--ceEEEeCCCCCCC--CCceEEEEEeCCchhh
Q 022564 247 E-Y--ADVVTTTTHKSLR--GPRGAMIFFRKGVKEI 277 (295)
Q Consensus 247 ~-~--~D~~~~s~~K~l~--gp~gG~l~~~~~~~~~ 277 (295)
. . .-+++.|++|+|+ |.+.|+++.++++.+.
T Consensus 225 ~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~~li~~ 260 (388)
T PRK07366 225 DPEKSVSIEFFTLSKSYNMGGFRIGFAIGNAQLIQA 260 (388)
T ss_pred CCCcccEEEEeecccccCCcchhheehcCCHHHHHH
Confidence 1 1 2367899999874 4555999998876553
No 57
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.85 E-value=9e-20 Score=167.03 Aligned_cols=234 Identities=14% Similarity=0.073 Sum_probs=159.7
Q ss_pred hhccCcccccCHHHHHHHHHHHHHHHcCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHH
Q 022564 21 KQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQ 98 (295)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~ 98 (295)
+++++++.......+..+.+......+.++|..+++. +++.+.+++.+.+.... ..|+...+..++++++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~-------~~Y~~~~G~~~lr~~ia 76 (384)
T PRK06348 4 KFLAKKYQQMEVNIMAEIATLAKKFPDIIDLSLGDPDLITDESIINAAFEDAKKGH-------TRYTDSGGDVELIEEII 76 (384)
T ss_pred hHHHHHHhcCCccHHHHHHHHHHhcCCcEEcCCCCCCCCCCHHHHHHHHHHHhcCC-------CCCCCCCCcHHHHHHHH
Confidence 4556666667777777666654333467899887764 45666665555443211 12444556678888888
Q ss_pred HHHHHHcCC--CCCCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeec
Q 022564 99 KRALEAFRL--DPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL 175 (295)
Q Consensus 99 ~~la~~~g~--~~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 175 (295)
+++.+.+|. +++ +|++|+|++ ++..++.+++++||+|+++.|.|+.+.. .+...|..+..+ +.
T Consensus 77 ~~~~~~~~~~~~~~----~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~--------~~~~~g~~~~~~--~~ 142 (384)
T PRK06348 77 KYYSKNYDLSFKRN----EIMATVGACHGMYLALQSILDPGDEVIIHEPYFTPYKD--------QIEMVGGKPIIL--ET 142 (384)
T ss_pred HHHHHHhCCCCChh----hEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHH--------HHHHcCCEEEEe--cC
Confidence 888776665 665 899999999 8877889999999999999965555433 344556544334 33
Q ss_pred C-CCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--Cc---cCHHHHHHHHHHcCCEEEEEccccccccccCCCC-CCC--
Q 022564 176 N-ESTGYIDYDQLEKSATLFRPKLIVAGASAYA--RL---YDYERIRKVCNKQKAIMLADMAHISGLVAAGVIP-SPF-- 246 (295)
Q Consensus 176 ~-~~~~~id~e~l~~~i~~~~tk~i~l~~~n~~--~~---~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~-~~~-- 246 (295)
+ .+++.+|++++++.+++ ++++|+++.+||| .. ..+++|.++|++||++||+|+++..........+ ..+
T Consensus 143 ~~~~~~~~d~~~l~~~~~~-~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~ 221 (384)
T PRK06348 143 YEEDGFQINVKKLEALITS-KTKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFVPMATLAG 221 (384)
T ss_pred CcCcCCcCCHHHHHHhhCc-CccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCCCccchhhcCC
Confidence 2 24567999999999876 8999999866664 33 3578899999999999999999764322211111 011
Q ss_pred -CcceEEEeCCCCCCC--CCceEEEEEeCCchh
Q 022564 247 -EYADVVTTTTHKSLR--GPRGAMIFFRKGVKE 276 (295)
Q Consensus 247 -~~~D~~~~s~~K~l~--gp~gG~l~~~~~~~~ 276 (295)
....+++.|++|.++ |.+.|++++++++.+
T Consensus 222 ~~~~vi~~~SfSK~~~l~GlRiG~~v~~~~~~~ 254 (384)
T PRK06348 222 MPERTITFGSFSKDFAMTGWRIGYVIAPDYIIE 254 (384)
T ss_pred CcCcEEEEecchhccCCccccceeeecCHHHHH
Confidence 124588999999875 455699999877654
No 58
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.85 E-value=1.1e-19 Score=166.77 Aligned_cols=231 Identities=12% Similarity=0.084 Sum_probs=160.8
Q ss_pred CcccccCHHHHHHHHHHHHHHHcCceecCCCC--CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHH
Q 022564 25 APLEVVDPEIADIIEHEKARQWKGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRAL 102 (295)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~--~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la 102 (295)
+++....+.++..+.+..+.....++|..|++ .+++.+.+++.+.+.... ...|....+..+++++++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~a~~~~~~~~~------~~~Y~~~~G~~~lr~~~~~~l~ 79 (389)
T PRK05957 6 SRMDAVQSPIIPVVGQLIRENPGTISLGQGVVSYPPPPEAIEALNNFLANPE------NHKYQAVQGIPPLLEAITQKLQ 79 (389)
T ss_pred HHHHhcCCcHHHHHHHHHHhCCCeEEccCCCCCCCCCHHHHHHHHHHHhCCC------CCCCCCCCCCHHHHHHHHHHHH
Confidence 44555556666666655444345688988776 368889999988765421 1124445667888999999999
Q ss_pred HHcCCC---CCCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCC
Q 022564 103 EAFRLD---PEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES 178 (295)
Q Consensus 103 ~~~g~~---~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 178 (295)
+++|.+ ++ +|++|+|++ ++..++.+++++||+|++++|.|..+.. .+...|.++..++ .+ +
T Consensus 80 ~~~g~~~~~~~----~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~--------~~~~~g~~~~~v~--~~-~ 144 (389)
T PRK05957 80 QDNGIELNNEQ----AIVVTAGSNMAFMNAILAITDPGDEIILNTPYYFNHEM--------AITMAGCQPILVP--TD-D 144 (389)
T ss_pred HHhCCCCCCCC----eEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcCHHH--------HHHhcCCEEEEee--cC-C
Confidence 998974 43 799999998 7776888889999999999976655532 2234565554454 44 5
Q ss_pred CCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccC---HHHHHHHHHHcCCEEEEEccccccccccCCCCC--CC-C--c
Q 022564 179 TGYIDYDQLEKSATLFRPKLIVAGASAYA--RLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPS--PF-E--Y 248 (295)
Q Consensus 179 ~~~id~e~l~~~i~~~~tk~i~l~~~n~~--~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~--~~-~--~ 248 (295)
++.+|++++++.+++ ++|+|+++.+||| ...+ +++|+++|+++|+++++|+++............ .+ . .
T Consensus 145 ~~~~d~~~l~~~i~~-~~klv~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~ 223 (389)
T PRK05957 145 NYQLQPEAIEQAITP-KTRAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGN 223 (389)
T ss_pred CCCcCHHHHHHhcCc-CceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccC
Confidence 678999999999976 8999998755553 5555 889999999999999999997533222111001 11 1 1
Q ss_pred ceEEEeCCCCCCCCC--ceEEEEEeCCchhh
Q 022564 249 ADVVTTTTHKSLRGP--RGAMIFFRKGVKEI 277 (295)
Q Consensus 249 ~D~~~~s~~K~l~gp--~gG~l~~~~~~~~~ 277 (295)
..+++.|++|.++.| +-|++++++++.+.
T Consensus 224 ~~i~~~S~SK~~g~~GlRiG~~~~~~~~~~~ 254 (389)
T PRK05957 224 HTISLYSLSKAYGFASWRIGYMVIPIHLLEA 254 (389)
T ss_pred cEEEEecchhhccCccceeEEEecCHHHHHH
Confidence 347789999987433 34999998876543
No 59
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.84 E-value=8e-20 Score=167.77 Aligned_cols=229 Identities=14% Similarity=0.116 Sum_probs=156.8
Q ss_pred ccccCHHHHHHHHHHHHHHHcCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHH
Q 022564 27 LEVVDPEIADIIEHEKARQWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEA 104 (295)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~ 104 (295)
+..+....+..+.+..+...+.++|..+++. +++.+.+++.+.+.... ..|....+..++++++.+++.+.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~-------~~Y~~~~g~~~lr~~ia~~~~~~ 86 (391)
T PRK08361 14 INLIQRSKIRELFERASKMENVISLGIGEPDFDTPKNIKEAAKRALDEGW-------THYTPNAGIPELREAIAEYYKKF 86 (391)
T ss_pred HHhCCccHHHHHHHHHHhhcCeEEcCCCCCCCCCCHHHHHHHHHHHhcCC-------CCCCCCCCcHHHHHHHHHHHHHH
Confidence 3334444444444433233457999888874 46788888887765421 11334456678888888888777
Q ss_pred cC--CCCCCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCC-CC
Q 022564 105 FR--LDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES-TG 180 (295)
Q Consensus 105 ~g--~~~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~-~~ 180 (295)
+| ++++ +|++|+|++ ++..++.+++++||+|+++++.|.++.. .+...|.++..++ ++.+ ++
T Consensus 87 ~g~~~~~~----~i~~t~G~~~al~~~~~~l~~~g~~Vlv~~p~y~~~~~--------~~~~~g~~~~~v~--~~~~~~~ 152 (391)
T PRK08361 87 YGVDVDVD----NVIVTAGAYEATYLAFESLLEEGDEVIIPDPAFVCYVE--------DAKIAEAKPIRIP--LREENEF 152 (391)
T ss_pred hCCCCCcc----cEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHH--------HHHHcCCEEEEEe--cCCccCC
Confidence 66 4565 899999999 8777888899999999999976665533 3335565554444 5433 46
Q ss_pred CCCHHHHHHHHhhcCCcEEEEcCCCC--CCccC---HHHHHHHHHHcCCEEEEEccccccccccCCCCC--CC-CcceEE
Q 022564 181 YIDYDQLEKSATLFRPKLIVAGASAY--ARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPS--PF-EYADVV 252 (295)
Q Consensus 181 ~id~e~l~~~i~~~~tk~i~l~~~n~--~~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~--~~-~~~D~~ 252 (295)
.+|++++++.+++ ++++++++.+|| |...+ +++|.++|+++++++|+|+++............ .+ ...+++
T Consensus 153 ~~d~~~l~~~i~~-~~~~v~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~i~ 231 (391)
T PRK08361 153 QPDPDELLELITK-RTRMIVINYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYAPDNTIL 231 (391)
T ss_pred CCCHHHHHHhccc-ccEEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcCCCCEEE
Confidence 7999999999987 899999885566 36666 788999999999999999997644332111110 01 125688
Q ss_pred EeCCCCCCCCCc--eEEEEEeCCchhh
Q 022564 253 TTTTHKSLRGPR--GAMIFFRKGVKEI 277 (295)
Q Consensus 253 ~~s~~K~l~gp~--gG~l~~~~~~~~~ 277 (295)
+.|++|.|+.|. .|++++++++.+.
T Consensus 232 ~~s~SK~~~~~GlRiG~~~~~~~~~~~ 258 (391)
T PRK08361 232 ANSFSKTFAMTGWRLGFVIAPEQVIKD 258 (391)
T ss_pred EecCchhcCCcHhhhhhhccCHHHHHH
Confidence 999999885453 4999998776543
No 60
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.84 E-value=1.2e-19 Score=166.95 Aligned_cols=229 Identities=12% Similarity=0.082 Sum_probs=156.6
Q ss_pred ccccCHHHHHHHHHHHHHH-----HcCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHH
Q 022564 27 LEVVDPEIADIIEHEKARQ-----WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQK 99 (295)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~-----~~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~ 99 (295)
+..+.++.+..+.+..... .+.++|..+++. +++.+.+++.+.+.... . |+...+..++++++.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~--~------Y~~~~G~~~lr~~ia~ 76 (396)
T PRK09147 5 LDRLQPYPFEKLRALFAGVTPPADLPPISLSIGEPKHPTPAFIKDALAANLDGLA--S------YPTTAGLPALREAIAA 76 (396)
T ss_pred hhcCCcchHHHHHHHHHhhhhccCCCeEecCCCCCCCCCCHHHHHHHHHHhhhhc--C------CCCCCCCHHHHHHHHH
Confidence 4445555555555544322 367889888873 57788888877654311 2 3444556788888889
Q ss_pred HHHHHcCC---CCCCcceeEEeCCChH-HHHHHHHhhcCC---CCeEEEecCCCCcccCccccccccccccceeeeEEEe
Q 022564 100 RALEAFRL---DPEKWGVNVQSLSGSP-SNFQVYTALLKP---HDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMP 172 (295)
Q Consensus 100 ~la~~~g~---~~~~~~~~v~~~sG~~-a~~~~~~al~~~---gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~ 172 (295)
++.+.+|. ++++ +|++|+|++ ++..++.+++++ ||.|++++|.|+ .+...+...|.++..+|
T Consensus 77 ~~~~~~g~~~~~~~~---~i~it~G~~~al~~~~~~l~~~~~~gd~vlv~~P~y~--------~~~~~~~~~g~~~~~vp 145 (396)
T PRK09147 77 WLERRYGLPALDPAT---QVLPVNGSREALFAFAQTVIDRDGPGPLVVCPNPFYQ--------IYEGAALLAGAEPYFLN 145 (396)
T ss_pred HHHHHhCCCcCCccc---eEEECCChHHHHHHHHHHHcCCCCCCCEEEEcCCCcc--------chHHHHHhcCCEEEEec
Confidence 99888784 4432 799999999 887788999999 999999995444 33334446676555554
Q ss_pred eecCC-CCCCCCHHHHHHHHhhcCCcEEEEcCCCCC-----CccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCC-
Q 022564 173 YRLNE-STGYIDYDQLEKSATLFRPKLIVAGASAYA-----RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP- 245 (295)
Q Consensus 173 ~~~~~-~~~~id~e~l~~~i~~~~tk~i~l~~~n~~-----~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~- 245 (295)
++. +++.+|++++++.+.+ ++|+++++++||| ....+++|+++|++|+++||+|+++..-..........
T Consensus 146 --~~~~~~~~~d~~~l~~~~~~-~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~ 222 (396)
T PRK09147 146 --CDPANNFAPDFDAVPAEVWA-RTQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGL 222 (396)
T ss_pred --cCccccCccCHHHHHHHHhh-ccEEEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchh
Confidence 443 3468999999988876 8999999866664 34467788999999999999999976433221100000
Q ss_pred C--------C--cceEEEeCCCCCC--CCCceEEEEEeCCchhh
Q 022564 246 F--------E--YADVVTTTTHKSL--RGPRGAMIFFRKGVKEI 277 (295)
Q Consensus 246 ~--------~--~~D~~~~s~~K~l--~gp~gG~l~~~~~~~~~ 277 (295)
+ . ..-+++.|++|.+ .|.+.|++++++++.+.
T Consensus 223 ~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~~~~~~l~~~ 266 (396)
T PRK09147 223 LEAAAELGRDDFKRLVVFHSLSKRSNVPGLRSGFVAGDAALLKK 266 (396)
T ss_pred hhhccccCccccccEEEEeccccccCCccceeeeecCCHHHHHH
Confidence 0 0 1238899999965 45555999998876543
No 61
>PRK08912 hypothetical protein; Provisional
Probab=99.84 E-value=1e-19 Score=166.83 Aligned_cols=236 Identities=12% Similarity=0.097 Sum_probs=162.6
Q ss_pred hhccCcccccCHHHHHHHHHHHHHHHcCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHH
Q 022564 21 KQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQ 98 (295)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~ 98 (295)
+++++++.+..+..+..+.+... ....++|..|.+. .|+.+.+++.+.+.+.. ..|+...+..++++++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~l~~g~p~~~~p~~~~~~~~~~~~~~~-------~~Y~~~~G~~~lr~~ia 73 (387)
T PRK08912 2 KMGNPVFADLPTTIFEVMSQLAR-EHGAINLGQGFPDDPGPEDVRRAAADALLDGS-------NQYPPMMGLPELRQAVA 73 (387)
T ss_pred chhhHHHhhCCCCHHHHHHHHHh-hCCeEEccCCCCCCCCCHHHHHHHHHHHhcCC-------CCCCCCCCcHHHHHHHH
Confidence 34455566667777766666433 2466888876653 46778888777654421 12445566778998888
Q ss_pred HHHHHHcCC--CCCCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeec
Q 022564 99 KRALEAFRL--DPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL 175 (295)
Q Consensus 99 ~~la~~~g~--~~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 175 (295)
+++.+.+|. +++. +|++|+|++ ++.+++.+++++||+|++++|.|+.+.. .+...|.++..++ +
T Consensus 74 ~~~~~~~g~~~~~~~---~i~~t~G~~~al~~~~~~~~~~gd~Vlv~~p~y~~~~~--------~~~~~g~~~~~~~--~ 140 (387)
T PRK08912 74 AHYARFQGLDLDPET---EVMVTSGATEALAAALLALVEPGDEVVLFQPLYDAYLP--------LIRRAGGVPRLVR--L 140 (387)
T ss_pred HHHHHHhCCCCCCcc---cEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHH--------HHHHcCCEEEEEe--c
Confidence 888887775 4431 699999999 8777888999999999999966655432 3445665554454 5
Q ss_pred CCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--Ccc---CHHHHHHHHHHcCCEEEEEccccccccccCCC----CC-C
Q 022564 176 NESTGYIDYDQLEKSATLFRPKLIVAGASAYA--RLY---DYERIRKVCNKQKAIMLADMAHISGLVAAGVI----PS-P 245 (295)
Q Consensus 176 ~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~~--~~~---~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~----~~-~ 245 (295)
+.+++.+|++++++.+.+ ++|+++++.+||| ... ++++|.++|++|++++|+|+++.......... .. +
T Consensus 141 ~~~~~~~~~~~l~~~~~~-~~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~ 219 (387)
T PRK08912 141 EPPHWRLPRAALAAAFSP-RTKAVLLNNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPG 219 (387)
T ss_pred CcccCcCCHHHHHHHhCc-cceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCC
Confidence 444678999999999876 8999999855664 444 47789999999999999999976432221110 00 1
Q ss_pred CCcceEEEeCCCCCCCCC--ceEEEEEeCCchhhh
Q 022564 246 FEYADVVTTTTHKSLRGP--RGAMIFFRKGVKEIN 278 (295)
Q Consensus 246 ~~~~D~~~~s~~K~l~gp--~gG~l~~~~~~~~~~ 278 (295)
....++++.|++|.|+-| +-|++++++++.+..
T Consensus 220 ~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~~~~l 254 (387)
T PRK08912 220 MRERTVKIGSAGKIFSLTGWKVGFVCAAPPLLRVL 254 (387)
T ss_pred ccCceEEEeechhhccCcCceeEEEecCHHHHHHH
Confidence 113578999999987423 349999988765543
No 62
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.84 E-value=1.6e-19 Score=165.41 Aligned_cols=233 Identities=17% Similarity=0.104 Sum_probs=156.2
Q ss_pred CcccccCHHHHHHHHHHHHHH----HcCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHH
Q 022564 25 APLEVVDPEIADIIEHEKARQ----WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQ 98 (295)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~----~~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~ 98 (295)
+++....++.+..+.+..+.. .+.++|..+++. +++.+.+++.+.+..... ..|+...+..++++++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~------~~Y~~~~G~~~lr~aia 79 (385)
T PRK09276 6 DRIKNLPPYLFAEIDKKKAEKIARGVDVISLGIGDPDLPTPDHIIEAMCKAVEDPEN------HQYPSYEGMLEFRKAVA 79 (385)
T ss_pred hHhhhCCccHHHHHHHHHHHHHhcCCCEEEecCCCCCCCCCHHHHHHHHHHHhCCCC------CCCCCCCCcHHHHHHHH
Confidence 344455555555544433222 356889888774 577888888887653111 12444455678888888
Q ss_pred HHHHHHcCC--CCCCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeec
Q 022564 99 KRALEAFRL--DPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL 175 (295)
Q Consensus 99 ~~la~~~g~--~~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 175 (295)
+++.+.+|. ++++ +|++|+|++ ++..++.+++++||+|++++|.|+.+ ...+...|.++..++ .
T Consensus 80 ~~~~~~~g~~~~~~~---~ii~t~G~~~~i~~~~~~~~~~gd~Vl~~~P~y~~~--------~~~~~~~g~~~~~v~--~ 146 (385)
T PRK09276 80 DWYKRRFGVELDPET---EVISLIGSKEGIAHIPLAFVNPGDVVLVPDPGYPVY--------KIGTIFAGGEPYFMP--L 146 (385)
T ss_pred HHHHHHhCCCCCCCC---cEEEccCcHHHHHHHHHHhCCCCCEEEEcCCCCcCh--------HHHHHHcCCEEEEEe--c
Confidence 888887775 4431 588999998 77778888999999999999655443 323445665555554 4
Q ss_pred CCC-CCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccC---HHHHHHHHHHcCCEEEEEccccccccccCCCC--CCC-
Q 022564 176 NES-TGYIDYDQLEKSATLFRPKLIVAGASAYA--RLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIP--SPF- 246 (295)
Q Consensus 176 ~~~-~~~id~e~l~~~i~~~~tk~i~l~~~n~~--~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~--~~~- 246 (295)
+.+ ++.+|++++++.+.+ ++++|++++|||| ...+ +++|+++|++|+++||+|+++........... ..+
T Consensus 147 ~~~~g~~~d~~~l~~~~~~-~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~ 225 (385)
T PRK09276 147 KEENGFLPDLDAIPEDVAK-KAKLMFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVP 225 (385)
T ss_pred CCCCCCcCCHHHHHHhccc-cceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccC
Confidence 423 467899999998876 8999999866664 4444 67889999999999999999764332210000 011
Q ss_pred --CcceEEEeCCCCCCCCC--ceEEEEEeCCchhh
Q 022564 247 --EYADVVTTTTHKSLRGP--RGAMIFFRKGVKEI 277 (295)
Q Consensus 247 --~~~D~~~~s~~K~l~gp--~gG~l~~~~~~~~~ 277 (295)
....+++.|++|.|+.| +-|++++++++.+.
T Consensus 226 ~~~~~~i~~~S~SK~~g~~GlRiG~~i~~~~l~~~ 260 (385)
T PRK09276 226 GAKDVGIEFHSLSKTYNMTGWRIGFAVGNADLIAG 260 (385)
T ss_pred CCcCCEEEEecchhhcCCcchhheeeeCCHHHHHH
Confidence 12457889999987433 34999998876554
No 63
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.84 E-value=3.3e-20 Score=183.69 Aligned_cols=217 Identities=16% Similarity=0.132 Sum_probs=148.9
Q ss_pred cCceecCC-CCCCCH-HHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-
Q 022564 47 KGLELIPS-ENFTSV-SVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP- 123 (295)
Q Consensus 47 ~~i~L~~~-~~~~~~-~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~- 123 (295)
+.+.|+.. ..++++ .+.+++...+.+.+ +++.+.+.. .....++.+.+|+.+++++|+++++ .+|+||+|++
T Consensus 34 ~~iYLD~Aatt~~~~~~V~~~~~~~~~~~~--~np~s~~~~-s~~~~~~~e~aR~~ia~~lga~~~~--~~VvFtsnaT~ 108 (805)
T PLN02724 34 GVVYLDHAGATLYSESQLEAALADFSSNVY--GNPHSQSDS-SMRSSDTIESARQQVLEYFNAPPSD--YACVFTSGATA 108 (805)
T ss_pred CCEeEeCCCCCCCCHHHHHHHHHHHHhhcc--CCCCcCcch-hhhHHHHHHHHHHHHHHHhCCCccc--eEEEEeCChHH
Confidence 35666544 445455 55555555555433 444432222 2334556678999999999997653 2689999999
Q ss_pred HHHHHHHhh-cCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCC-----CCCCCCH--HHHHHHHh---
Q 022564 124 SNFQVYTAL-LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE-----STGYIDY--DQLEKSAT--- 192 (295)
Q Consensus 124 a~~~~~~al-~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-----~~~~id~--e~l~~~i~--- 192 (295)
++..+..++ +++||+|++...+|++...+.... ...|.+++.++++.+. +.+.+++ +++++.++
T Consensus 109 alnlva~~l~~~~gd~Iv~t~~eH~svl~~~~~a-----~~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l 183 (805)
T PLN02724 109 ALKLVGETFPWSSESHFCYTLENHNSVLGIREYA-----LEKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKL 183 (805)
T ss_pred HHHHHHHHCCCCCCCeEEEeeccccchHHHHHHH-----HHcCCeEEeccchhccccccccccccccchhhhhhhhhhhh
Confidence 766677777 789999999999999987433211 1235455555543111 1233443 66776542
Q ss_pred ------hcCCcEEEEc-CCCC-CCccCHHHHHHHHHHc--------CCEEEEEccccccccccCCCCCCCCcceEEEeCC
Q 022564 193 ------LFRPKLIVAG-ASAY-ARLYDYERIRKVCNKQ--------KAIMLADMAHISGLVAAGVIPSPFEYADVVTTTT 256 (295)
Q Consensus 193 ------~~~tk~i~l~-~~n~-~~~~~l~~I~~ia~~~--------~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~ 256 (295)
..+|++|.++ .+|. |.+.|++.|..+++.. ++++++|+||++|..+.++...+ +|++++|+
T Consensus 184 ~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~g~~piDv~~~~---~Dfl~~S~ 260 (805)
T PLN02724 184 QKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGCGTSPPDLSRYP---ADFVVVSF 260 (805)
T ss_pred ccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhcCCCCCChhhcC---CCEEEEec
Confidence 1256888886 4444 7999999776555532 35799999999999999988777 99999999
Q ss_pred CCCCCCCce-EEEEEeCCchh
Q 022564 257 HKSLRGPRG-AMIFFRKGVKE 276 (295)
Q Consensus 257 ~K~l~gp~g-G~l~~~~~~~~ 276 (295)
|||++||.| |+|++++++.+
T Consensus 261 HK~~GgP~G~G~L~vr~~~~~ 281 (805)
T PLN02724 261 YKIFGYPTGLGALLVRRDAAK 281 (805)
T ss_pred ceeccCCCCceEEEEehhhhh
Confidence 999988999 99999998654
No 64
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.84 E-value=1.2e-19 Score=165.91 Aligned_cols=187 Identities=16% Similarity=0.146 Sum_probs=136.8
Q ss_pred CCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhh-c
Q 022564 55 ENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTAL-L 133 (295)
Q Consensus 55 ~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al-~ 133 (295)
.+..+++..+++.+.+...+. +.+ +...+++ +.+++++|.+. .+.+++|+.|+.+++.++ +
T Consensus 9 ~p~~~~~e~~~~~~~l~~~~~--------~~g-~~~~~le----~~la~~~g~~~-----~v~~~sgt~al~lal~al~~ 70 (379)
T PRK11658 9 RPAMGDEELAAVKEVLRSGWI--------TTG-PKNQALE----QAFCQLTGNQH-----AIAVSSATAGMHITLMALGI 70 (379)
T ss_pred CCCCCHHHHHHHHHHHHcCCc--------cCC-HhHHHHH----HHHHHHhCCCe-----EEEECCHHHHHHHHHHHcCC
Confidence 334566778888887765321 111 2334444 88889999864 556655555888788888 8
Q ss_pred CCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCCCccCHH
Q 022564 134 KPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYE 213 (295)
Q Consensus 134 ~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~ 213 (295)
++||+|+++.+.|.++... +...|.++..+ +++++++.+|++++++++++ +||+|+.+.+ .|...|++
T Consensus 71 ~~Gd~Viv~~~~~~~~~~~--------~~~~G~~~v~v--d~~~~~~~~d~~~l~~~i~~-~tkav~~~~~-~G~~~d~~ 138 (379)
T PRK11658 71 GPGDEVITPSLTWVSTLNM--------IVLLGATPVMV--DVDRDTLMVTPEAIEAAITP-RTKAIIPVHY-AGAPADLD 138 (379)
T ss_pred CCCCEEEECCCcHHHHHHH--------HHHcCCEEEEE--ecCCCcCCcCHHHHHHhccc-CCeEEEEeCC-CCCcCCHH
Confidence 9999999999877776432 23456555444 46655678999999999987 8998875432 46788999
Q ss_pred HHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCceEEEEEeC
Q 022564 214 RIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRK 272 (295)
Q Consensus 214 ~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~gG~l~~~~ 272 (295)
+|.++|++||+++|+|++|+.|....+..... .+.++++++.+|++.++.||++++++
T Consensus 139 ~i~~~a~~~gi~vi~D~a~a~g~~~~~~~~g~-~g~~~~Sf~~~K~l~~g~GG~v~~~~ 196 (379)
T PRK11658 139 AIRAIGERYGIPVIEDAAHAVGTYYKGRHIGA-RGTAIFSFHAIKNITCAEGGLVVTDD 196 (379)
T ss_pred HHHHHHHHcCCeEEEECCCccCCeECCeecCC-CCCEEEeCCCCCcCcccCceEEEECC
Confidence 99999999999999999999987765432211 24678899999999998999988864
No 65
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.84 E-value=1.1e-19 Score=166.13 Aligned_cols=226 Identities=14% Similarity=0.066 Sum_probs=151.9
Q ss_pred cccCHHHHHHHHHHHHHH---HcCceecCCCC--CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHH
Q 022564 28 EVVDPEIADIIEHEKARQ---WKGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRAL 102 (295)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~---~~~i~L~~~~~--~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la 102 (295)
..+++..|..+....... .+.|+|..+++ ++++.+.+++.+.+....... |+...+..+++ +.++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~------y~~~~g~~~lr----~~ia 76 (380)
T PRK06225 7 AKVPPSGFKTSNEFFDYVFKDKEMIWMGQNTNHLGPHEEVREAMIRCIEEGEYCK------YPPPEGFPELR----ELIL 76 (380)
T ss_pred cccCcchhhhHHHHHHHHhhcCCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCC------CCCCcchHHHH----HHHH
Confidence 456666676666644333 46788887777 468899999998876422111 33333444444 7888
Q ss_pred HHcCCCCCCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCC
Q 022564 103 EAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGY 181 (295)
Q Consensus 103 ~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~ 181 (295)
+++|++++ +|++++|++ ++..++.+++.+||+|+++++.|..+ ...+...|.++..+++..+.+++.
T Consensus 77 ~~l~~~~~----~v~~~~g~t~al~~~~~~~~~~gd~vl~~~p~y~~~--------~~~~~~~g~~~~~v~~~~~~~~~~ 144 (380)
T PRK06225 77 KDLGLDDD----EALITAGATESLYLVMRAFLSPGDNAVTPDPGYLII--------DNFASRFGAEVIEVPIYSEECNYK 144 (380)
T ss_pred HhcCCCCC----cEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcch--------HHHHHHhCceEEeeccccccCCcc
Confidence 88999886 899999999 87778888899999999999554433 223335565554444322222468
Q ss_pred CCHHHHHHHHhhcCCcEEEEcCCCCC--C---ccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCC-cceEEEeC
Q 022564 182 IDYDQLEKSATLFRPKLIVAGASAYA--R---LYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE-YADVVTTT 255 (295)
Q Consensus 182 id~e~l~~~i~~~~tk~i~l~~~n~~--~---~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~-~~D~~~~s 255 (295)
+|++++++.+++ ++++++++.++|| . ..++++|.++|++||+++|+|+++.. ..........+. ...+++.|
T Consensus 145 ~d~~~l~~~~~~-~~~~v~l~~p~NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~-~~~~~~~~~~~~~~~~i~~~s 222 (380)
T PRK06225 145 LTPELVKENMDE-NTRLIYLIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRD-FAREHTLAAEYAPEHTVTSYS 222 (380)
T ss_pred CCHHHHHhhcCC-CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCcEEEEehhHHH-HhccCCchhhcCCCCEEEEee
Confidence 999999999986 8999988755553 3 34688999999999999999999631 111100000001 25577889
Q ss_pred CCCCCC--CCceEEEEEeCCchhh
Q 022564 256 THKSLR--GPRGAMIFFRKGVKEI 277 (295)
Q Consensus 256 ~~K~l~--gp~gG~l~~~~~~~~~ 277 (295)
++|+|+ |.+.|++++++++.+.
T Consensus 223 ~SK~~g~~G~RiG~i~~~~~l~~~ 246 (380)
T PRK06225 223 FSKIFGMAGLRIGAVVATPDLIEV 246 (380)
T ss_pred chhhcCCccceeEEEecCHHHHHH
Confidence 999984 2334999998776543
No 66
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.84 E-value=1.9e-19 Score=165.73 Aligned_cols=232 Identities=15% Similarity=0.119 Sum_probs=155.7
Q ss_pred CcccccCHHHHHHHHHHHHHH----HcCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHH
Q 022564 25 APLEVVDPEIADIIEHEKARQ----WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQ 98 (295)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~----~~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~ 98 (295)
+++..+.++.+..+....... .+.++|..+++. +++.+.+++.+.+.+....+|+ ..+..++++++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~y~-------~~G~~~lr~aia 79 (399)
T PRK07681 7 TRMKAFQSSIFSELGAYKKEKIAAGHKMIDLSIGNPDMPPADFVREEMVHTANQKESYGYT-------LSGIQEFHEAVT 79 (399)
T ss_pred HHHhhcCccHHHHHHHHHHHhhhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhccccCCCC-------CCCcHHHHHHHH
Confidence 334444455555554443322 356889888774 6788888888776531101221 135577888888
Q ss_pred HHHHHHcCC--CCCCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeec
Q 022564 99 KRALEAFRL--DPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL 175 (295)
Q Consensus 99 ~~la~~~g~--~~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 175 (295)
+++.+.+|. ++++ +|++|+|++ ++..++.+++++||+|++++|.|+.+. ..+...|.++..++ +
T Consensus 80 ~~~~~~~g~~~~~~~---~I~it~G~~~al~~~~~~~~~~Gd~Vlv~~P~y~~~~--------~~~~~~G~~~~~v~--~ 146 (399)
T PRK07681 80 EYYNNTHNVILNADK---EVLLLMGSQDGLVHLPMVYANPGDIILVPDPGYTAYE--------TGIQMAGATSYYMP--L 146 (399)
T ss_pred HHHHHHhCCCCCCCC---eEEECCCcHHHHHHHHHHhCCCCCEEEECCCCccchH--------HHHHhcCCEEEEEe--c
Confidence 888877775 5521 899999999 777788889999999999996555443 34446675554454 5
Q ss_pred CCC-CCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccC---HHHHHHHHHHcCCEEEEEccccccccccCCCCC--CCC
Q 022564 176 NES-TGYIDYDQLEKSATLFRPKLIVAGASAYA--RLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPS--PFE 247 (295)
Q Consensus 176 ~~~-~~~id~e~l~~~i~~~~tk~i~l~~~n~~--~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~--~~~ 247 (295)
+.+ ++.+|++++++.+.+ ++++|++++|||| ...+ +++|+++|++||++||+|+++............ .+.
T Consensus 147 ~~~~~~~~d~~~l~~~~~~-~~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~ 225 (399)
T PRK07681 147 KKENDFLPDLELIPEEIAD-KAKMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVP 225 (399)
T ss_pred CCCCCCcCCHHHHHHhccc-cceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCC
Confidence 533 468899999998876 8999999865554 4444 778899999999999999997643322111110 111
Q ss_pred ---cceEEEeCCCCCCC--CCceEEEEEeCCchhh
Q 022564 248 ---YADVVTTTTHKSLR--GPRGAMIFFRKGVKEI 277 (295)
Q Consensus 248 ---~~D~~~~s~~K~l~--gp~gG~l~~~~~~~~~ 277 (295)
...+++.|++|.|+ |.+.|+++.++++.+.
T Consensus 226 ~~~~~~i~~~S~SK~~~~~GlRiG~~i~~~~l~~~ 260 (399)
T PRK07681 226 GAKEVGVEINSLSKSYSLAGSRIGYMIGNEEIVRA 260 (399)
T ss_pred CCcccEEEEeecccccCCccceeEEEecCHHHHHH
Confidence 13578899999884 3345999988776543
No 67
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.84 E-value=1.2e-19 Score=164.11 Aligned_cols=201 Identities=16% Similarity=0.146 Sum_probs=141.6
Q ss_pred ecCCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHH
Q 022564 51 LIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVY 129 (295)
Q Consensus 51 L~~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~ 129 (295)
+.+|...+++.+++++...... + . ....++.+.+++.+++++|++++. ..|++++|++ ++..++
T Consensus 3 ~~p~p~~~~~~~~~~~~~~~~~-~-----------~-~~~~~~~~~~~~~la~~~~~~~~~--~~i~~~~~gt~~l~~~~ 67 (355)
T TIGR03301 3 LTPGPLSTSATVRDAMLVDWCH-W-----------D-SEFNDVTDQVRDRLLALAGGDDNH--TCVLLQGSGTFAVEATI 67 (355)
T ss_pred CcCCCCCCCHHHHHHhhhhccC-C-----------C-HHHHHHHHHHHHHHHHHhcCCCCC--cEEEEeCCcHHHHHHHH
Confidence 4566667899999998873322 1 0 122356667889999999997642 2466665555 888788
Q ss_pred HhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhh-cCCcEEEEcCCCC--
Q 022564 130 TALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL-FRPKLIVAGASAY-- 206 (295)
Q Consensus 130 ~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~-~~tk~i~l~~~n~-- 206 (295)
.+++.+||++++..+.+.+.. +...+...|.++..++ .+ .++.+|++++++.+++ .++++++++.+++
T Consensus 68 ~~~~~~~~~vi~~~~~~~~~~------~~~~a~~~g~~~~~i~--~~-~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~ 138 (355)
T TIGR03301 68 GSLVPRDGKLLVLINGAYGER------LAKICEYLGIPHTDLN--FS-EYEPPDLNRIEEALAADPDITHVATVHHETTT 138 (355)
T ss_pred HhccCCCCeEEEECCCchhhH------HHHHHHHcCCceEEEe--cC-CCCCCCHHHHHHHHHhCCCceEEEEEecCCcc
Confidence 888888998777663322210 0112234455554454 43 3578999999999975 1345565553333
Q ss_pred CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCce-EEEEEeCCchhhh
Q 022564 207 ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEIN 278 (295)
Q Consensus 207 ~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~~ 278 (295)
|...|+++|.++|++||+++++|++|+.|..+.+....+ +|++++|+|||++||.| |+++++++..+..
T Consensus 139 G~~~~~~~i~~l~~~~~~~livD~~~s~g~~~~~~~~~~---~d~~~~s~~K~l~~~~G~g~~~~~~~~~~~~ 208 (355)
T TIGR03301 139 GILNPLEAIAKVARSHGAVLIVDAMSSFGAIPIDIEELD---VDALIASANKCLEGVPGFGFVIARRDLLEAS 208 (355)
T ss_pred cchhHHHHHHHHHHHcCCEEEEEeccccCCcccchhhcC---ccEEEecCCcccccCCceeEEEECHHHHHHh
Confidence 588899999999999999999999999887665444444 99999999999999988 9999999876543
No 68
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.84 E-value=1e-19 Score=166.40 Aligned_cols=186 Identities=20% Similarity=0.205 Sum_probs=135.1
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhh-cCCC
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTAL-LKPH 136 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al-~~~g 136 (295)
.+++.++++.+.+.+.+ +.......+ +++.+++++|.+. .+.+++|+.|+..++.++ +++|
T Consensus 8 ~~~~~~~~v~~~~~~~~---------~~~g~~~~~----le~~la~~~g~~~-----~v~~~sgt~al~~~l~al~~~~G 69 (380)
T TIGR03588 8 IDQDDIDAVVEVLKSDF---------LTQGPTVPA----FEEALAEYVGAKY-----AVAFNSATSALHIACLALGVGPG 69 (380)
T ss_pred CCHHHHHHHHHHHhcCC---------ccCChhHHH----HHHHHHHHHCCCe-----EEEEcCHHHHHHHHHHHcCCCCC
Confidence 45666788888776522 111123344 4578888999865 677777766888788888 8999
Q ss_pred CeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhh---cCCcEEEEcCCCCCCccCHH
Q 022564 137 DRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL---FRPKLIVAGASAYARLYDYE 213 (295)
Q Consensus 137 d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~---~~tk~i~l~~~n~~~~~~l~ 213 (295)
|+|+++.+.|.++.. .+...|.++..+ +++++++.+|++++++++++ .+|++|+++.. .|...+++
T Consensus 70 d~Viv~~~~~~~~~~--------~~~~~G~~~~~~--~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~~~~~-~G~~~~~~ 138 (380)
T TIGR03588 70 DRVWTTPITFVATAN--------CALYCGAKVDFV--DIDPDTGNIDEDALEKKLAAAKGKLPKAIVPVDF-AGKSVDMQ 138 (380)
T ss_pred CEEEeCCcchHHHHH--------HHHHcCCEEEEE--ecCCCcCCcCHHHHHHHhhcccCCCceEEEEeCC-CCccCCHH
Confidence 999999977766543 233556555444 46555678999999999982 28898886532 47788999
Q ss_pred HHHHHHHHcCCEEEEEccccccccccCCCCCCC-CcceEEEeCCC--CCCCCCceEEEEEeCC
Q 022564 214 RIRKVCNKQKAIMLADMAHISGLVAAGVIPSPF-EYADVVTTTTH--KSLRGPRGAMIFFRKG 273 (295)
Q Consensus 214 ~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~-~~~D~~~~s~~--K~l~gp~gG~l~~~~~ 273 (295)
+|.++|++||++||+|++|+.|....+ .+.+. ...|+.++|+| |+++.+.||+++++++
T Consensus 139 ~i~~l~~~~~~~lI~D~a~a~g~~~~~-~~~g~~~~~d~~~~S~~~~K~~~~~~GG~v~~~~~ 200 (380)
T TIGR03588 139 AIAALAKKHGLKIIEDASHALGAEYGG-KPVGNCRYADATVFSFHPVKIITTAEGGAVTTNDE 200 (380)
T ss_pred HHHHHHHHcCCEEEEECCCcccCccCC-EeCCCccccceEEEecCCCCcccccCceEEEECCH
Confidence 999999999999999999999876322 22220 13599999988 9998888998888754
No 69
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.84 E-value=3.3e-19 Score=163.24 Aligned_cols=212 Identities=17% Similarity=0.092 Sum_probs=147.0
Q ss_pred HcCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCC--CCCCcceeEEeCCC
Q 022564 46 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWGVNVQSLSG 121 (295)
Q Consensus 46 ~~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~--~~~~~~~~v~~~sG 121 (295)
.+.++|..+++. +++.+.+++.+.+..... ..|+...+..++++++.+++.+.+|. +++. +|++|+|
T Consensus 29 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~------~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~---~vi~t~G 99 (383)
T TIGR03540 29 VDVISLGIGDPDLPTPKHIVEALCKAAENPEN------HRYPSYEGMLAYRQAVADWYKRRFGVELDPET---EVLSLIG 99 (383)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHhCCCC------CCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCC---eEEECCC
Confidence 356888888764 577888888877643111 12344455678888888988887776 3331 5889999
Q ss_pred hH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCC-CCCCCHHHHHHHHhhcCCcEE
Q 022564 122 SP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES-TGYIDYDQLEKSATLFRPKLI 199 (295)
Q Consensus 122 ~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~-~~~id~e~l~~~i~~~~tk~i 199 (295)
++ ++..++.+++++||+|++++|.|+.+. ..+...|.++..++ ++.+ ++.+|++++++.+.+ ++++|
T Consensus 100 ~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~--------~~~~~~G~~v~~v~--~~~~~g~~~d~~~l~~~~~~-~~~~v 168 (383)
T TIGR03540 100 SKEGIAHIPLAFVNPGDIVLVPDPGYPVYR--------IGTLFAGGEPYEMP--LKEENGFLPDFDAIPEDIAK-KAKLM 168 (383)
T ss_pred cHHHHHHHHHHhCCCCCEEEEeCCCCcchH--------HHHHhcCCEEEEEe--cCcccCCccCHHHHHhhccc-cceEE
Confidence 98 777788889999999999996655543 23445675555454 4433 467899999998876 89999
Q ss_pred EEcCCCCC--CccC---HHHHHHHHHHcCCEEEEEccccccccccCCCC--CCCC---cceEEEeCCCCCCC--CCceEE
Q 022564 200 VAGASAYA--RLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIP--SPFE---YADVVTTTTHKSLR--GPRGAM 267 (295)
Q Consensus 200 ~l~~~n~~--~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~--~~~~---~~D~~~~s~~K~l~--gp~gG~ 267 (295)
++++|||| ...+ +++|+++|++||+++|+|+++........... ..+. ...+++.|++|+|+ |.+-|+
T Consensus 169 ~i~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~ 248 (383)
T TIGR03540 169 FINYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGM 248 (383)
T ss_pred EEeCCCCCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEecccccCCccceeeE
Confidence 99855564 4444 78999999999999999999764322110000 0111 24477899999884 333499
Q ss_pred EEEeCCchhh
Q 022564 268 IFFRKGVKEI 277 (295)
Q Consensus 268 l~~~~~~~~~ 277 (295)
++.++++.+.
T Consensus 249 ~i~~~~l~~~ 258 (383)
T TIGR03540 249 AVGNADLIAG 258 (383)
T ss_pred EeCCHHHHHH
Confidence 9988876543
No 70
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.84 E-value=2.3e-19 Score=164.84 Aligned_cols=232 Identities=14% Similarity=0.133 Sum_probs=154.6
Q ss_pred cccccCHHHHHHHHHHHHH----HHcCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHH
Q 022564 26 PLEVVDPEIADIIEHEKAR----QWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQK 99 (295)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~----~~~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~ 99 (295)
++..+.++.+..+.+..+. ..+.++|..+.+. +|+.+.+++.+.+.... ...|+...+..++++++.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~p~~~~p~~~~~~~~~~~~~~~------~~~Y~~~~G~~~lr~aia~ 84 (394)
T PRK05942 11 RLQALPPYVFARLDELKARAREQGLDLIDLGMGNPDGAAPQPVIEAAIAALADPQ------NHGYPPFEGTASFRQAITD 84 (394)
T ss_pred hhccCCCcHHHHHHHHHHHHHhcCCCeEEcCCCCCCCCCCHHHHHHHHHHHhCCC------CccCCCCCCCHHHHHHHHH
Confidence 3445555555444443222 1356888876553 45667777766654311 1224555667789988889
Q ss_pred HHHHHcCC--CCCCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecC
Q 022564 100 RALEAFRL--DPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 176 (295)
Q Consensus 100 ~la~~~g~--~~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 176 (295)
++.+.+|. +++. +|++|+|++ ++..++.+++++||+|++++|.|+.+... +...|.++..++ ++
T Consensus 85 ~~~~~~~~~~~~~~---~i~vt~G~~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~--------~~~~g~~~~~v~--~~ 151 (394)
T PRK05942 85 WYHRRYGVELDPDS---EALPLLGSKEGLTHLALAYVNPGDVVLVPSPAYPAHFRG--------PLIAGAQIYPII--LK 151 (394)
T ss_pred HHHHHHCCCcCCCC---eEEEccChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHH--------HHHcCCEEEEee--cC
Confidence 98887775 4541 488999999 88778888999999999999777665432 224565454444 54
Q ss_pred C-CCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccC---HHHHHHHHHHcCCEEEEEccccccccccCCCCCC---C-
Q 022564 177 E-STGYIDYDQLEKSATLFRPKLIVAGASAYA--RLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP---F- 246 (295)
Q Consensus 177 ~-~~~~id~e~l~~~i~~~~tk~i~l~~~n~~--~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~---~- 246 (295)
. +++.+|++++++.+.+ ++|+|++++|||| ...+ +++|.++|++||++||+|+++...... +....+ +
T Consensus 152 ~~~~~~~d~~~l~~~~~~-~~k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~-~~~~~~~~~~~ 229 (394)
T PRK05942 152 PENDWLIDLSSIPEEVAQ-QAKILYFNYPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFD-GYQPTSLLEIP 229 (394)
T ss_pred CccCCccCHHHHHHhccc-cceEEEEcCCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhccC-CCCCCChhhCC
Confidence 3 3468999999999876 8999999855554 4444 778999999999999999997643321 111111 1
Q ss_pred --CcceEEEeCCCCCCCCC--ceEEEEEeCCchhhh
Q 022564 247 --EYADVVTTTTHKSLRGP--RGAMIFFRKGVKEIN 278 (295)
Q Consensus 247 --~~~D~~~~s~~K~l~gp--~gG~l~~~~~~~~~~ 278 (295)
....+.+.|++|.|+.| +.|+++.++++.+..
T Consensus 230 ~~~~~~i~~~SfSK~~~~~GlRiG~i~~~~~l~~~l 265 (394)
T PRK05942 230 GAKDIGVEFHTLSKTYNMAGWRVGFVVGNRHIIQGL 265 (394)
T ss_pred CccccEEEEecchhccCChhhheeeeecCHHHHHHH
Confidence 12447789999977433 349999988765543
No 71
>PLN02368 alanine transaminase
Probab=99.84 E-value=2.5e-19 Score=164.62 Aligned_cols=179 Identities=16% Similarity=0.131 Sum_probs=126.9
Q ss_pred cCCcchHHHHHHHHHHHHHHHcCC--CCCCcceeEEeCCChH-HHHHHHHhhc-CCCCeEEEecCCCCcccCcccccccc
Q 022564 84 YGGNEYIDMAESLCQKRALEAFRL--DPEKWGVNVQSLSGSP-SNFQVYTALL-KPHDRIMALDLPHGGHLSHGYQTDTK 159 (295)
Q Consensus 84 ~~~~~~~~~l~~~~~~~la~~~g~--~~~~~~~~v~~~sG~~-a~~~~~~al~-~~gd~Vl~~~~~~~~~~~~~~~~~~~ 159 (295)
|+...+..++++++.+++.+.+|+ +++ +|++|+|++ ++..++.+++ ++||+|++++|.|+ .+..
T Consensus 103 Y~~~~G~~~LR~aia~~~~~~~g~~~~~~----~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~--------~y~~ 170 (407)
T PLN02368 103 YSDSRGLPGVRKEVAEFIERRDGYPSDPE----LIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYP--------LYSA 170 (407)
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCCChh----hEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCc--------cHHH
Confidence 566677788999999999888785 565 899999999 8777888887 79999999995444 4444
Q ss_pred ccccceeeeEEEeeecCC-CCCCCCHHHHHHHHhhc-----CCcEEEEcCCCCC-----CccCHHHHHHHHHHcCCEEEE
Q 022564 160 KISAVSIFFETMPYRLNE-STGYIDYDQLEKSATLF-----RPKLIVAGASAYA-----RLYDYERIRKVCNKQKAIMLA 228 (295)
Q Consensus 160 ~~~~~g~~~~~v~~~~~~-~~~~id~e~l~~~i~~~-----~tk~i~l~~~n~~-----~~~~l~~I~~ia~~~~~~viv 228 (295)
.+...|.++..++ ++. +++.+|++++++.+++. ++|++++++|||| ....+++|+++|++||++||+
T Consensus 171 ~~~~~g~~~v~v~--~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~ 248 (407)
T PLN02368 171 TISLLGGTLVPYY--LEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLG 248 (407)
T ss_pred HHHHcCCEEEEEe--cccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEE
Confidence 4556776554444 443 35789999999998631 6888888866664 445677888999999999999
Q ss_pred EccccccccccC-CCCC------CC----C-c-ceEEEeCCCCCC---CCCceEEEEE---eCCchh
Q 022564 229 DMAHISGLVAAG-VIPS------PF----E-Y-ADVVTTTTHKSL---RGPRGAMIFF---RKGVKE 276 (295)
Q Consensus 229 D~a~~~g~~~~~-~~~~------~~----~-~-~D~~~~s~~K~l---~gp~gG~l~~---~~~~~~ 276 (295)
|+++..-..... .... .+ . . .-+++.|++|.| +|.+.|++++ ++++.+
T Consensus 249 DE~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~li~ 315 (407)
T PLN02368 249 DEVYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVE 315 (407)
T ss_pred EccccccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHHHH
Confidence 999654332211 1110 00 0 1 237789999986 4777799985 544443
No 72
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.83 E-value=7.1e-20 Score=166.44 Aligned_cols=184 Identities=21% Similarity=0.231 Sum_probs=132.2
Q ss_pred CHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhh-cCCCC
Q 022564 59 SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTAL-LKPHD 137 (295)
Q Consensus 59 ~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al-~~~gd 137 (295)
.++.++++.+.+.+.+. ........++| +.+++++|.+. .+.++||++|+.+++.++ +++||
T Consensus 4 ~~e~~~~v~~~l~s~~~--------~~~g~~~~~fE----~~~a~~~g~~~-----~~~~~sgt~Al~~al~~l~~~~gd 66 (363)
T PF01041_consen 4 TEEEIDAVLEVLRSGWL--------STYGPYVEEFE----KEFAEYFGVKY-----AVAVSSGTSALHLALRALGLGPGD 66 (363)
T ss_dssp HHHHHHHHHHHHHHTCC--------SSSSHHHHHHH----HHHHHHHTSSE-----EEEESSHHHHHHHHHHHTTGGTTS
T ss_pred CHHHHHHHHHHHHhCCc--------cCCCHHHHHHH----HHHHHHhCCCe-----EEEeCChhHHHHHHHHhcCCCcCc
Confidence 35667788888776431 11124555566 78889999876 688888888888788888 78999
Q ss_pred eEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHH
Q 022564 138 RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRK 217 (295)
Q Consensus 138 ~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ 217 (295)
+|+++...+.+...+.. ..|. +++.++++++++.+|++++++++++ +||+|++. +-+|...|+++|.+
T Consensus 67 eVi~p~~t~~~~~~ai~--------~~G~--~pv~~Di~~~~~~id~~~~~~~i~~-~t~ai~~~-h~~G~~~d~~~i~~ 134 (363)
T PF01041_consen 67 EVIVPAYTFPATASAIL--------WAGA--EPVFVDIDPETLNIDPEALEKAITP-KTKAILVV-HLFGNPADMDAIRA 134 (363)
T ss_dssp EEEEESSS-THHHHHHH--------HTT---EEEEE-BETTTSSB-HHHHHHHHHT-TEEEEEEE--GGGB---HHHHHH
T ss_pred eEecCCCcchHHHHHHH--------Hhcc--EEEEEeccCCcCCcCHHHHHHHhcc-CccEEEEe-cCCCCcccHHHHHH
Confidence 99999977777765433 5664 4466678888999999999999998 89988874 33455669999999
Q ss_pred HHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCC--CCCCCCceEEEEEeCC
Q 022564 218 VCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTH--KSLRGPRGAMIFFRKG 273 (295)
Q Consensus 218 ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~--K~l~gp~gG~l~~~~~ 273 (295)
+|+++|++||.|+||+.|....+..... ..|+.++|+| |.+....||+++++++
T Consensus 135 ~~~~~~i~lIeD~a~a~g~~~~g~~~G~--~gd~~~fSf~~~K~i~~geGG~v~~~~~ 190 (363)
T PF01041_consen 135 IARKHGIPLIEDAAQAFGARYKGRPVGS--FGDIAIFSFHPTKIITTGEGGAVVTNDP 190 (363)
T ss_dssp HHHHTT-EEEEE-TTTTT-EETTEETTS--SSSEEEEESSTTSSS-SSS-EEEEESTH
T ss_pred HHHHcCCcEEEccccccCceeCCEeccC--CCCceEecCCCCCCCcCCCCeeEEecHH
Confidence 9999999999999999998776543322 2577777765 9998889999999985
No 73
>PRK07550 hypothetical protein; Provisional
Probab=99.83 E-value=3.2e-19 Score=163.51 Aligned_cols=208 Identities=14% Similarity=0.078 Sum_probs=145.4
Q ss_pred cCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCC--CCCCcceeEEeCCCh
Q 022564 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWGVNVQSLSGS 122 (295)
Q Consensus 47 ~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~--~~~~~~~~v~~~sG~ 122 (295)
..++|..+++. +++.+.+++.+.+.+.. ...|+...+..++++++.+++.+.+|. +++ +|++|+|+
T Consensus 30 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~------~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~----~i~~t~G~ 99 (386)
T PRK07550 30 PLIDLSQAVPGYPPPPELLRALAEAAADPA------AHLYGPVEGLPELREAYAAHYSRLYGAAISPE----QVHITSGC 99 (386)
T ss_pred CeEEeCCCCCCCCCCHHHHHHHHHHHhCcC------CcCCCCCCCCHHHHHHHHHHHHHHhCCCCCcc----eEEEecCc
Confidence 56888878763 46788888877654311 112444456788998898999888775 454 89999998
Q ss_pred H-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCC-CCCCCCHHHHHHHHhhcCCcEEE
Q 022564 123 P-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE-STGYIDYDQLEKSATLFRPKLIV 200 (295)
Q Consensus 123 ~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~id~e~l~~~i~~~~tk~i~ 200 (295)
+ ++..++.+++++||+|+++.|.|+.+.. .+...|.++..+ +.++ +++.+|++++++++++ ++++++
T Consensus 100 ~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~--------~~~~~g~~~~~v--~~~~~~~~~~~~~~l~~~~~~-~~~~v~ 168 (386)
T PRK07550 100 NQAFWAAMVTLAGAGDEVILPLPWYFNHKM--------WLDMLGIRPVYL--PCDEGPGLLPDPAAAEALITP-RTRAIA 168 (386)
T ss_pred HHHHHHHHHHhcCCCCEEEEcCCCCcchHH--------HHHhcCCEEEEE--ecCCCcCCCCCHHHHHHHhcc-cCcEEE
Confidence 8 8777888889999999999976655532 233556555444 4543 3567899999999987 899988
Q ss_pred EcCCCCC--Ccc---CHHHHHHHHHHcCCEEEEEccccccccccCCCCCCC------CcceEEEeCCCCCCC--CCceEE
Q 022564 201 AGASAYA--RLY---DYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPF------EYADVVTTTTHKSLR--GPRGAM 267 (295)
Q Consensus 201 l~~~n~~--~~~---~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~------~~~D~~~~s~~K~l~--gp~gG~ 267 (295)
++.+||| ... .+++|.++|++||++||+|++++... .......++ ....+++.|++|.++ |.+.|+
T Consensus 169 ~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~-~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~ 247 (386)
T PRK07550 169 LVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFD-SGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHRVGA 247 (386)
T ss_pred EeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhc-cCCCCCcchhhCCCccccEEEEecchhhccCcccceEe
Confidence 8755553 334 47899999999999999999975321 111111111 112467999999885 555699
Q ss_pred EEEeCCchh
Q 022564 268 IFFRKGVKE 276 (295)
Q Consensus 268 l~~~~~~~~ 276 (295)
+++++++.+
T Consensus 248 i~~~~~~~~ 256 (386)
T PRK07550 248 VVASPARIA 256 (386)
T ss_pred eecCHHHHH
Confidence 999876544
No 74
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.83 E-value=2.2e-19 Score=165.59 Aligned_cols=212 Identities=11% Similarity=0.079 Sum_probs=148.3
Q ss_pred cCceecCCCC---CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCC--CC-CCcceeEEeCC
Q 022564 47 KGLELIPSEN---FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DP-EKWGVNVQSLS 120 (295)
Q Consensus 47 ~~i~L~~~~~---~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~--~~-~~~~~~v~~~s 120 (295)
+.++|+.|++ .+++.+.+++.+.+......+ |+...+..++++++.+++++++|. ++ + +|++|+
T Consensus 40 ~~i~l~~g~~~~~~p~~~~~~~~~~~~~~~~~~~------Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~----~I~it~ 109 (405)
T PRK06207 40 RPVDFSHGDVDAHEPTPGAFELFSAGVERGGVQA------YTEYRGDADIRELLAARLAAFTGAPVDAAD----ELIITP 109 (405)
T ss_pred CceecCCcCCCCCCCCHHHHHHHHHHHhcCCCcc------CCCCCCCHHHHHHHHHHHHHHhCCCCCCCC----CEEEeC
Confidence 5578876654 357788888888765421112 444456678999999999999895 44 4 799999
Q ss_pred ChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeec--CCCCCCCCHHHHHHHHhhcCCc
Q 022564 121 GSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL--NESTGYIDYDQLEKSATLFRPK 197 (295)
Q Consensus 121 G~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~~~id~e~l~~~i~~~~tk 197 (295)
|++ ++..++.+++++||+|++++|.|+++. ..+...|.++..++++. ..+++.+|+++|++++++ +++
T Consensus 110 Ga~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~--------~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~-~~k 180 (405)
T PRK06207 110 GTQGALFLAVAATVARGDKVAIVQPDYFANR--------KLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFKA-GVR 180 (405)
T ss_pred CcHHHHHHHHHHhcCCCCEEEEeCCCchhHH--------HHHHHcCCEEEEEeccccCcccCCCcCHHHHHHhhhh-cCe
Confidence 999 888788999999999999996665543 23345565554454321 113578999999999977 899
Q ss_pred EEEEcCCCCC--Ccc---CHHHHHHHHHHcCCEEEEEccccccccccCCCCC--CCC---cceEEEeCCCCCCC--CCce
Q 022564 198 LIVAGASAYA--RLY---DYERIRKVCNKQKAIMLADMAHISGLVAAGVIPS--PFE---YADVVTTTTHKSLR--GPRG 265 (295)
Q Consensus 198 ~i~l~~~n~~--~~~---~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~--~~~---~~D~~~~s~~K~l~--gp~g 265 (295)
+++++.|||| ... ++++|+++|++||++||+|+++..-......... .+. ..-+++.|++|.|+ |.+.
T Consensus 181 ~v~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlRi 260 (405)
T PRK06207 181 VFLFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGYRL 260 (405)
T ss_pred EEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhhccCcccce
Confidence 9988866664 444 4778999999999999999997643222111110 011 12278999999885 5566
Q ss_pred EEEEEeCCchhh
Q 022564 266 AMIFFRKGVKEI 277 (295)
Q Consensus 266 G~l~~~~~~~~~ 277 (295)
|+++.++++.+.
T Consensus 261 G~ii~~~~l~~~ 272 (405)
T PRK06207 261 GVAFGSPAIIDR 272 (405)
T ss_pred EEEEcCHHHHHH
Confidence 999988776543
No 75
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.83 E-value=6.4e-19 Score=162.54 Aligned_cols=227 Identities=15% Similarity=0.100 Sum_probs=154.1
Q ss_pred cCHHHHHHHHHHHHHH------HcCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHH
Q 022564 30 VDPEIADIIEHEKARQ------WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA 101 (295)
Q Consensus 30 ~~~~~~~~~~~~~~~~------~~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~l 101 (295)
...+.+..+.....+. .+.++|..|++. +++.+.+++.+.+......+ |+. .+..++++++.+++
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~g~p~~~~~~~~~~~l~~~~~~~~~~~------Y~~-~G~~~lr~aia~~~ 94 (410)
T PRK06290 22 TVIYKFEKIKRAKRAAKEKHPDMELIDMGVGEPDEMADESVVEVLCEEAKKPENRG------YAD-NGIQEFKEAAARYM 94 (410)
T ss_pred CchhHHHHHHHHHHHHhhhcCCCCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCCCC------CCC-CCcHHHHHHHHHHH
Confidence 3444555555443322 146899888875 57788888877654311112 332 45678888888888
Q ss_pred HHHcCCC---CCCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCC
Q 022564 102 LEAFRLD---PEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE 177 (295)
Q Consensus 102 a~~~g~~---~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 177 (295)
.+.+|.+ ++. +|++|+|++ ++..++.+++++||.|+++.|.|+.+ ...+...|.++..++ ++.
T Consensus 95 ~~~~g~~~~~~~~---~I~it~Gs~~al~~~~~~~~~~gd~Vlv~~P~y~~~--------~~~~~~~g~~v~~v~--~~~ 161 (410)
T PRK06290 95 EKVFGVKDIDPVT---EVIHSIGSKPALAMLPSCFINPGDVTLMTVPGYPVT--------GTHTKYYGGEVYNLP--LLE 161 (410)
T ss_pred HHHcCCCcCCCcc---eEEEccCHHHHHHHHHHHhCCCCCEEEEeCCCCccH--------HHHHHHcCCEEEEEe--cCC
Confidence 8877754 432 699999999 87778889999999999999655444 333445665554454 553
Q ss_pred -CCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccC---HHHHHHHHHHcCCEEEEEccccccccccCCCC-CCC---C
Q 022564 178 -STGYIDYDQLEKSATLFRPKLIVAGASAYA--RLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIP-SPF---E 247 (295)
Q Consensus 178 -~~~~id~e~l~~~i~~~~tk~i~l~~~n~~--~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~-~~~---~ 247 (295)
+++.+|++++++.+.+ ++|+|++++|||| ...+ +++|.++|++|+++||+|+++........... ..+ .
T Consensus 162 ~~~~~~d~~~l~~~~~~-~~k~i~l~nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~~s~~~~~~~~ 240 (410)
T PRK06290 162 ENNFLPDLDSIPKDIKE-KAKLLYLNYPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKPLSFLSVPGAK 240 (410)
T ss_pred CcCCcCCHHHHHHhhcc-cceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchhhceeCCCCcChhcCCCcc
Confidence 3467899999998876 8999999855664 4444 67888899999999999999764432211000 011 1
Q ss_pred cceEEEeCCCCCCC--CCceEEEEEeCCchhh
Q 022564 248 YADVVTTTTHKSLR--GPRGAMIFFRKGVKEI 277 (295)
Q Consensus 248 ~~D~~~~s~~K~l~--gp~gG~l~~~~~~~~~ 277 (295)
..++++.|++|.++ |.+-|+++.++++.+.
T Consensus 241 ~~~I~i~SfSK~~g~~GlRiG~ii~~~~l~~~ 272 (410)
T PRK06290 241 EVGVEIHSLSKAYNMTGWRLAFVVGNELIVKA 272 (410)
T ss_pred ccEEEEeechhhcCCchhheEeEEeCHHHHHH
Confidence 35689999999884 4444999998876553
No 76
>PRK07777 aminotransferase; Validated
Probab=99.83 E-value=3.7e-19 Score=163.16 Aligned_cols=231 Identities=11% Similarity=0.115 Sum_probs=158.3
Q ss_pred CcccccCHHHHHHHHHHHHHHHcCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHH
Q 022564 25 APLEVVDPEIADIIEHEKARQWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRAL 102 (295)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la 102 (295)
+++.++.+.++..+..... ..+.++|..+.+. .++.+.+++.+.+.... ..|+...+..++++++.+++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~-~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~-------~~Y~~~~g~~~lr~~ia~~~~ 75 (387)
T PRK07777 4 SRLRPFGTTIFAEMSALAV-RTGAVNLGQGFPDEDGPPEMLEAAQEAIAGGV-------NQYPPGPGIPELRAAIAAQRR 75 (387)
T ss_pred hhhhhcCccHHHHHHHHHh-hCCeEEccCCCCCCCCCHHHHHHHHHHHhcCC-------CCCCCCCCCHHHHHHHHHHHH
Confidence 3455666767776666543 3467899877653 35667777776664321 124444667888888888888
Q ss_pred HHcCCC--CCCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCC-
Q 022564 103 EAFRLD--PEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES- 178 (295)
Q Consensus 103 ~~~g~~--~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~- 178 (295)
+.+|.+ +++ +|++|+|++ ++.+++.+++++||+|++..+.|+++.. .+...|..+..++ .+++
T Consensus 76 ~~~g~~~~~~~---~i~~t~G~~~al~~~~~~~~~~gd~vli~~p~y~~~~~--------~~~~~g~~~~~~~--~~~~~ 142 (387)
T PRK07777 76 RRYGLEYDPDT---EVLVTVGATEAIAAAVLGLVEPGDEVLLIEPYYDSYAA--------VIAMAGAHRVPVP--LVPDG 142 (387)
T ss_pred HHhCCCCCCCC---cEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHH--------HHHHCCCEEEEee--cCCcc
Confidence 888874 321 699999999 8877888899999999999966655432 3334565454444 4432
Q ss_pred -CCCCCHHHHHHHHhhcCCcEEEEcCCCCC--Cc---cCHHHHHHHHHHcCCEEEEEccccccccccC----CCCCC-CC
Q 022564 179 -TGYIDYDQLEKSATLFRPKLIVAGASAYA--RL---YDYERIRKVCNKQKAIMLADMAHISGLVAAG----VIPSP-FE 247 (295)
Q Consensus 179 -~~~id~e~l~~~i~~~~tk~i~l~~~n~~--~~---~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~----~~~~~-~~ 247 (295)
++.+|++++++++++ ++++|+++++||| .. .++++|.++|++|++++|+|+++........ ....+ ..
T Consensus 143 ~~~~~d~~~l~~~~~~-~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~ 221 (387)
T PRK07777 143 RGFALDLDALRAAVTP-RTRALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMR 221 (387)
T ss_pred CCCcCCHHHHHHhcCc-ccEEEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCc
Confidence 467999999999876 8999999866664 33 4588999999999999999999754322111 11111 12
Q ss_pred cceEEEeCCCCCCCCC--ceEEEEEeCCchhh
Q 022564 248 YADVVTTTTHKSLRGP--RGAMIFFRKGVKEI 277 (295)
Q Consensus 248 ~~D~~~~s~~K~l~gp--~gG~l~~~~~~~~~ 277 (295)
+.++++.|++|.|+.| +-|+++.++++.+.
T Consensus 222 ~~~i~~~S~SK~~g~~GlRiG~~~~~~~l~~~ 253 (387)
T PRK07777 222 ERTVTISSAAKTFNVTGWKIGWACGPAPLIAA 253 (387)
T ss_pred CcEEEEeechhhccCcCceeEEEecCHHHHHH
Confidence 3679999999998544 33999988876543
No 77
>PRK08068 transaminase; Reviewed
Probab=99.83 E-value=4.5e-19 Score=162.73 Aligned_cols=231 Identities=18% Similarity=0.167 Sum_probs=153.0
Q ss_pred ccccCHHHHHHHHHHHHHH----HcCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHH
Q 022564 27 LEVVDPEIADIIEHEKARQ----WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKR 100 (295)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~----~~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~ 100 (295)
+.+..+..+..+.....+. .+.++|..+++. +++.+.+++.+.+..... ..|+...+..++++++.++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~------~~Y~~~~g~~~lr~aia~~ 82 (389)
T PRK08068 9 LKQLPKQFFASLVAKVNKKVAEGHDVINLGQGNPDQPTPEHIVEALQEAAENPAN------HKYSPFRGYPFLKEAAADF 82 (389)
T ss_pred hhhcCccHHHHHHHHHHHHHhcCCCeEEecCCCCCCCCCHHHHHHHHHHHhCCCC------CCCCCCCCCHHHHHHHHHH
Confidence 3444444454444433222 356899877653 457788888877654211 1244445567888888888
Q ss_pred HHHHcCC--CCCCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCC
Q 022564 101 ALEAFRL--DPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE 177 (295)
Q Consensus 101 la~~~g~--~~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 177 (295)
+.+.+|. ++++ +|++|+|++ ++..++.+++++||.|++++|.|+.+.. .+...|.++..++ ++.
T Consensus 83 ~~~~~g~~~~~~~---~i~it~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~--------~~~~~g~~~~~i~--~~~ 149 (389)
T PRK08068 83 YKREYGVTLDPET---EVAILFGGKAGLVELPQCLMNPGDTILVPDPGYPDYLS--------GVALARAQFETMP--LIA 149 (389)
T ss_pred HHHHhCCCCCCCc---cEEEcCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHH--------HHHhcCCEEEEee--ccc
Confidence 8777774 5532 589999998 7776888889999999999966655433 4446675555555 543
Q ss_pred C-CCCCCHHHHHHHHhhcCCcEEEEcCCCCC--Ccc---CHHHHHHHHHHcCCEEEEEccccccccccCCCCCC---C--
Q 022564 178 S-TGYIDYDQLEKSATLFRPKLIVAGASAYA--RLY---DYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP---F-- 246 (295)
Q Consensus 178 ~-~~~id~e~l~~~i~~~~tk~i~l~~~n~~--~~~---~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~---~-- 246 (295)
+ ++.+|++++++.+++ ++++|++++|||| ... .+++|.++|++|+++||+|+++..-... +....+ .
T Consensus 150 ~~~~~~d~~~l~~~~~~-~~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~-~~~~~s~~~~~~ 227 (389)
T PRK08068 150 ENNFLPDYTKIPEEVAE-KAKLMYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFD-GQKPVSFLQTPG 227 (389)
T ss_pred ccCCCCCHHHHHHhccc-cceEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccC-CCCCcChhhCCC
Confidence 3 568899999999876 8999999866664 444 4568888999999999999997432111 111101 0
Q ss_pred -CcceEEEeCCCCCCC--CCceEEEEEeCCchhhh
Q 022564 247 -EYADVVTTTTHKSLR--GPRGAMIFFRKGVKEIN 278 (295)
Q Consensus 247 -~~~D~~~~s~~K~l~--gp~gG~l~~~~~~~~~~ 278 (295)
....+++.|++|.|+ |.+-|+++.++++.+..
T Consensus 228 ~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~l~~~l 262 (389)
T PRK08068 228 AKDVGIELYTLSKTFNMAGWRVAFAVGNESVIEAI 262 (389)
T ss_pred ccCCEEEEecchhccCCccceeEeEecCHHHHHHH
Confidence 113478999999884 33449999888765543
No 78
>PRK07337 aminotransferase; Validated
Probab=99.83 E-value=2.6e-19 Score=164.24 Aligned_cols=228 Identities=12% Similarity=0.091 Sum_probs=154.3
Q ss_pred cccccCHHHHHHHHHHHHHH----HcCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHH
Q 022564 26 PLEVVDPEIADIIEHEKARQ----WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQK 99 (295)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~----~~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~ 99 (295)
++..+.+..+..+.+..... .+.++|..+++. +++.+.+++.+.+.+.. ..|+...+..++++++.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~-------~~Y~~~~g~~~lr~~ia~ 78 (388)
T PRK07337 6 RVDAIEPFYVMELAKEAQALERAGRDIIHMGIGEPDFTAPEPVVEAAARALRRGV-------TQYTSALGLAPLREAIAA 78 (388)
T ss_pred HhHhcCchHHHHHHHHHHHHHhcCCCEEEeCCcCCCCCCCHHHHHHHHHHHhcCC-------CCCCCCCCCHHHHHHHHH
Confidence 34444444444444433322 356888888764 47788899888775421 113444556788888888
Q ss_pred HHHHHcCC--CCCCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecC
Q 022564 100 RALEAFRL--DPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 176 (295)
Q Consensus 100 ~la~~~g~--~~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 176 (295)
++.+.+|+ +++ +|++|+|++ ++..++.+++++||+|++++|.|+++... +...|.++..++ .+
T Consensus 79 ~~~~~~~~~~~~~----~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~--------~~~~g~~~~~~~--~~ 144 (388)
T PRK07337 79 WYARRFGLDVAPE----RIVVTAGASAALLLACLALVERGDEVLMPDPSYPCNRHF--------VAAAEGRPVLVP--SG 144 (388)
T ss_pred HHHHHhCCCCChH----hEEEecCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHH--------HHHcCCEEEEee--cC
Confidence 88877775 555 899999999 77778888899999999999877766432 224454454444 44
Q ss_pred C-CCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--C---ccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCC-cc
Q 022564 177 E-STGYIDYDQLEKSATLFRPKLIVAGASAYA--R---LYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE-YA 249 (295)
Q Consensus 177 ~-~~~~id~e~l~~~i~~~~tk~i~l~~~n~~--~---~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~-~~ 249 (295)
. +++.+|++++++.+++ ++++|+++.+||| . ..++++|+++|+++++++|+|+++.. ....+.....+. +.
T Consensus 145 ~~~~~~~~~~~l~~~~~~-~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~-~~~~~~~~~~~~~~~ 222 (388)
T PRK07337 145 PAERFQLTAADVEAAWGE-RTRGVLLASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQG-LSYDAAPVSALSLGD 222 (388)
T ss_pred CccCCcCCHHHHHhhcCc-cceEEEEECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccccc-cccCCCCcChhhccC
Confidence 3 3568999999999976 8999998855564 3 33578899999999999999999652 222111111111 12
Q ss_pred e-EEEeCCCCCCC--CCceEEEEEeCCchh
Q 022564 250 D-VVTTTTHKSLR--GPRGAMIFFRKGVKE 276 (295)
Q Consensus 250 D-~~~~s~~K~l~--gp~gG~l~~~~~~~~ 276 (295)
+ +++.|++|.|+ |.+.|++++++++.+
T Consensus 223 ~vi~~~S~SK~~~~~G~RiG~~~~~~~l~~ 252 (388)
T PRK07337 223 DVITINSFSKYFNMTGWRLGWLVVPEALVG 252 (388)
T ss_pred CEEEEEechhhcCCchhheeeeecCHHHHH
Confidence 3 45789999885 445599999877644
No 79
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.83 E-value=2.6e-19 Score=164.43 Aligned_cols=239 Identities=16% Similarity=0.123 Sum_probs=161.2
Q ss_pred cchhccCcccccCHHHHHHHHHHHHHHHcCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHH
Q 022564 19 WPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESL 96 (295)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~ 96 (295)
+.+.+++++..........+.+......+.|+|..+++. +++.+.+++.+.+.... ..|....+..+++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~-------~~Y~~~~g~~~lr~~ 75 (391)
T PRK07309 3 LTKRFNKQLDKIEVSLIRQFDQSISDIPGILKLTLGEPDFTTPDHVKEAAKRAIDANQ-------SHYTGMAGLLELRQA 75 (391)
T ss_pred hhhHHHhhhhhcCccHHHHHHHHHHhcCCeEEcCCCCCCCCCCHHHHHHHHHHHhcCC-------CCCCCCCCcHHHHHH
Confidence 344555556555555555554433222467888877764 46778888887765421 124444566889988
Q ss_pred HHHHHHHHcCCC--CCCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEee
Q 022564 97 CQKRALEAFRLD--PEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPY 173 (295)
Q Consensus 97 ~~~~la~~~g~~--~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 173 (295)
+++++.+.+|.. +++ +|++|+|++ ++..++.+++++||+|+++++.|+++.. .++..|.++..+
T Consensus 76 ia~~~~~~~~~~~~~~~---~i~it~G~~~al~~~~~~~~~~gd~vl~~~p~y~~~~~--------~~~~~g~~~~~~-- 142 (391)
T PRK07309 76 AADFVKEKYNLDYAPEN---EILVTIGATEALSASLTAILEPGDKVLLPAPAYPGYEP--------IVNLVGAEIVEI-- 142 (391)
T ss_pred HHHHHHHHhCCCCCCCC---cEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHH--------HHHHcCCEEEEE--
Confidence 888888777763 222 799999998 8777888899999999999976666532 333556555444
Q ss_pred ecCCCCCCCCHHHHHHHHhh--cCCcEEEEcCCCCC--Cc---cCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCC
Q 022564 174 RLNESTGYIDYDQLEKSATL--FRPKLIVAGASAYA--RL---YDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPF 246 (295)
Q Consensus 174 ~~~~~~~~id~e~l~~~i~~--~~tk~i~l~~~n~~--~~---~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~ 246 (295)
+.+..++.+|+++++++++. .++++++++.|+|| .. .++++|+++|++||+++|+|+++..-...... ..++
T Consensus 143 ~~~~~~~~~d~~~l~~~~~~~~~~~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~-~~~~ 221 (391)
T PRK07309 143 DTTENDFVLTPEMLEKAILEQGDKLKAVILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGEP-HVSI 221 (391)
T ss_pred ecCCcCCcCCHHHHHHHhhccCCCeEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCC-CCCH
Confidence 45534568999999999864 25889999855553 33 35889999999999999999997643332111 1111
Q ss_pred C----cceEEEeCCCCCCC--CCceEEEEEeCCchhhh
Q 022564 247 E----YADVVTTTTHKSLR--GPRGAMIFFRKGVKEIN 278 (295)
Q Consensus 247 ~----~~D~~~~s~~K~l~--gp~gG~l~~~~~~~~~~ 278 (295)
. ...+++.|++|.|+ |.+-|++++++++.+..
T Consensus 222 ~~~~~~~~i~~~S~SK~~g~~GlRvG~~v~~~~~~~~~ 259 (391)
T PRK07309 222 AEYLPDQTILINGLSKSHAMTGWRIGLIFAPAEFTAQL 259 (391)
T ss_pred HHhccCCEEEEecChhhccCccceeEEEEeCHHHHHHH
Confidence 1 13388999999874 33449999998865543
No 80
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.83 E-value=3.8e-19 Score=162.00 Aligned_cols=200 Identities=17% Similarity=0.102 Sum_probs=139.7
Q ss_pred ecCCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHH
Q 022564 51 LIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVY 129 (295)
Q Consensus 51 L~~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~ 129 (295)
|......+.|.+++++.+.+...+ +.+.. +. ...++++.+++++++++|++.+ .+++++|++ ++..++
T Consensus 25 ~~~~~~~~~~~~~~a~~~~~~~~~--~~~~~--~~---~~~~~~~~~~~~la~~~g~~~~----~~~~~~ggt~a~~~a~ 93 (371)
T PRK13520 25 LSSMCTEPHPIARKAHEMFLETNL--GDPGL--FP---GTAKLEEEAVEMLGELLHLPDA----YGYITSGGTEANIQAV 93 (371)
T ss_pred eeeeecCchHHHHHHHHHHHhcCC--CCccc--Cc---cHHHHHHHHHHHHHHHhCCCCC----CeEEecCcHHHHHHHH
Confidence 554455678888899988876532 32221 21 2355667788999999998764 566777777 877666
Q ss_pred HhhcC----CCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEc-CC
Q 022564 130 TALLK----PHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-AS 204 (295)
Q Consensus 130 ~al~~----~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~-~~ 204 (295)
.++.+ +||+|++++..|.++.. .+...|..+..++ .+ .++.+|++++++++++ ++++|+++ .+
T Consensus 94 ~~~~~~~~~~~~~vl~~~~~h~s~~~--------~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~i~~-~~~~vi~~~~~ 161 (371)
T PRK13520 94 RAARNLAKAEKPNIVVPESAHFSFDK--------AADMLGVELRRAP--LD-DDYRVDVKAVEDLIDD-NTIGIVGIAGT 161 (371)
T ss_pred HHHHhhccCCCceEEecCcchHHHHH--------HHHHcCceEEEec--CC-CCCcCCHHHHHHHHhh-CCEEEEEEcCC
Confidence 66543 68999999977766432 2334565565555 44 4578999999999987 78766654 33
Q ss_pred C-CCCccCHHHHHHHHHHcCCEEEEEccccccccccCCCC--C--CCCcceEEEeCCCCCCCCCce-EEEEEeCC
Q 022564 205 A-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIP--S--PFEYADVVTTTTHKSLRGPRG-AMIFFRKG 273 (295)
Q Consensus 205 n-~~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~--~--~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~ 273 (295)
| .|...|+++|.++|+++|+++++|++|+.+..+..... . ...++|++++|+|||+.+|.+ |+++++++
T Consensus 162 ~~tG~~~~l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~~vd~~~~s~~K~~~a~~~~G~~~~~~~ 236 (371)
T PRK13520 162 TELGQVDPIPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSLPGVDSITIDPHKMGLAPIPAGGILFRDE 236 (371)
T ss_pred cCCcccCCHHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccCCCCceEEECCccccCccCCceEEEEcCH
Confidence 3 36899999999999999999999999987664432211 1 123589999999998876655 66666543
No 81
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.83 E-value=2.1e-19 Score=168.73 Aligned_cols=199 Identities=13% Similarity=0.128 Sum_probs=140.8
Q ss_pred CCCHHHHHHHhhhhh-ccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHH---HH-h
Q 022564 57 FTSVSVMQAVGSVMT-NKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQV---YT-A 131 (295)
Q Consensus 57 ~~~~~v~~al~~~l~-~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~---~~-a 131 (295)
.++|.+.+++.+... ..| ..|.. .....+..+++.++++++++++|++. +.+..++|+++.... +. .
T Consensus 81 ~~~p~i~~~~~~~~~~~~~-tpYq~---e~~sqG~lel~~~~~~~la~l~G~~~----~~l~~~~GA~a~~~~l~~~r~~ 152 (481)
T PRK04366 81 KYNPKINEKVARLPGFAEL-HPLQP---EETVQGALELMYELQEWLKEITGMDA----VTLQPAAGAHGELTGLLMIRAY 152 (481)
T ss_pred CCCHHHHHHHHhCcchhcC-CCCCC---hhhhhHHHHHHHHHHHHHHHHhCCCc----eEEEeCcHHHHHHHHHHHHHHH
Confidence 568888888877521 112 11110 02345567888889999999999975 377777777733322 23 2
Q ss_pred hcCCCC----eEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCC-
Q 022564 132 LLKPHD----RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY- 206 (295)
Q Consensus 132 l~~~gd----~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~- 206 (295)
++++|| +|+++++.|+++... +...|.+++.++ .+ +++.+|++++++++++ +|++|++++||+
T Consensus 153 ~~~~Gd~~~~~Vlv~~~~hp~~~~~--------~~~~G~~vv~v~--~~-~~~~~D~e~L~~~i~~-~t~~V~v~~Pn~t 220 (481)
T PRK04366 153 HEARGDTKRTEVIVPDSAHGTNPAS--------AAMAGFKVVEIP--SN-EDGLVDLEALKAAVGE-DTAALMLTNPNTL 220 (481)
T ss_pred hhccCcCCCCEEEEcCCccHhHHHH--------HHHcCCEEEEee--cC-CCCCcCHHHHHhhccc-CCeEEEEeCCCCc
Confidence 367776 999999888887653 235665565555 44 4688999999999987 899999986665
Q ss_pred CCc-cCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCc-----e-EEEEEeCCchhh
Q 022564 207 ARL-YDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPR-----G-AMIFFRKGVKEI 277 (295)
Q Consensus 207 ~~~-~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~-----g-G~l~~~~~~~~~ 277 (295)
|.. .|+++|+++|+++|+++++|+||..+.... . ...-.|+|++++++||||++|. | |++++++++.+.
T Consensus 221 G~~~~dl~eI~~~a~~~gal~iVD~a~~~~~~g~-~-~~~~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~~~~~ 296 (481)
T PRK04366 221 GLFERNILEIAEIVHEAGGLLYYDGANLNAILGK-A-RPGDMGFDVVHLNLHKTFSTPHGGGGPGSGPVGVKEELAPF 296 (481)
T ss_pred cccchHHHHHHHHHHHcCCEEEEEecChhhhccc-C-CccccCCCEEEEechhhcCCCCCCCCCCeeeeeehhhhHhh
Confidence 444 589999999999999999999998664431 1 1111269999999999997553 3 799999876543
No 82
>PRK09082 methionine aminotransferase; Validated
Probab=99.83 E-value=2.2e-19 Score=164.59 Aligned_cols=233 Identities=12% Similarity=0.107 Sum_probs=161.8
Q ss_pred CcccccCHHHHHHHHHHHHHHHcCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHH
Q 022564 25 APLEVVDPEIADIIEHEKARQWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRAL 102 (295)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la 102 (295)
+++..+...++..+.... ...+.++|..|++. +++.+.+++.+.+.... .+ |....+..++++++.+++.
T Consensus 10 ~~~~~~~~~~~~~~~~~~-~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~-~~------Y~~~~G~~~lr~~~a~~l~ 81 (386)
T PRK09082 10 SKLPNVGTTIFTVMSALA-AEHGAINLSQGFPDFDGPPYLVEALAYAMAAGH-NQ------YPPMTGVAALREAIAAKTA 81 (386)
T ss_pred hHhhccCccHHHHHHHHH-hhCCEEEecCCCCCCCCCHHHHHHHHHHHHcCC-CC------CCCCCCcHHHHHHHHHHHH
Confidence 344556666766665543 23456899887764 46888888888765421 11 3444566788888999999
Q ss_pred HHcCCCCCCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCC
Q 022564 103 EAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGY 181 (295)
Q Consensus 103 ~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~ 181 (295)
+++|.+.+. ..+|++|+|++ ++..++.+++++||+|+++.+.|+++.. .+...|.++..+ +.+.+++.
T Consensus 82 ~~~~~~~~~-~~~i~~t~G~~~al~~~~~~~~~~gd~Vli~~p~y~~~~~--------~~~~~g~~~~~~--~~~~~~~~ 150 (386)
T PRK09082 82 RLYGRQYDA-DSEITVTAGATEALFAAILALVRPGDEVIVFDPSYDSYAP--------AIELAGGRAVRV--ALQPPDFR 150 (386)
T ss_pred HHhCCCCCC-CCcEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhhHH--------HHHHcCCEEEEE--ecCccccc
Confidence 988874321 01699999988 8877888899999999999976665533 333556555444 45545678
Q ss_pred CCHHHHHHHHhhcCCcEEEEcCCCCC-----CccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCC--C---CcceE
Q 022564 182 IDYDQLEKSATLFRPKLIVAGASAYA-----RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP--F---EYADV 251 (295)
Q Consensus 182 id~e~l~~~i~~~~tk~i~l~~~n~~-----~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~--~---~~~D~ 251 (295)
+|++++++.+++ ++++++++.++|| ...++++|.++|++||+++|+|+++............. + ....+
T Consensus 151 ~d~~~l~~~~~~-~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i 229 (386)
T PRK09082 151 VDWQRFAAAISP-RTRLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAF 229 (386)
T ss_pred CCHHHHHHhcCc-cceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEE
Confidence 999999999976 8999999755554 23678899999999999999999976443322111110 1 12458
Q ss_pred EEeCCCCCCC--CCceEEEEEeCCchhh
Q 022564 252 VTTTTHKSLR--GPRGAMIFFRKGVKEI 277 (295)
Q Consensus 252 ~~~s~~K~l~--gp~gG~l~~~~~~~~~ 277 (295)
++.|++|.++ |.+.|++++++++.+.
T Consensus 230 ~~~S~SK~~~~~G~RiG~iv~~~~l~~~ 257 (386)
T PRK09082 230 VVSSFGKTYHVTGWKVGYCVAPAALSAE 257 (386)
T ss_pred EEeechhhccchhhhhhhhhCCHHHHHH
Confidence 8999999884 4445999998876543
No 83
>PRK07682 hypothetical protein; Validated
Probab=99.82 E-value=4e-19 Score=162.44 Aligned_cols=212 Identities=15% Similarity=0.092 Sum_probs=148.6
Q ss_pred HcCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCC--CCCCcceeEEeCCC
Q 022564 46 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWGVNVQSLSG 121 (295)
Q Consensus 46 ~~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~--~~~~~~~~v~~~sG 121 (295)
.+.|+|..+++. +++.+.+++.+.+.+.+ .+ |+...+..++++++.+++.+.+|. ++++ +|++|+|
T Consensus 20 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~------Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~---~i~~t~G 89 (378)
T PRK07682 20 EGVISLGVGEPDFVTPWNVREASIRSLEQGY-TS------YTANAGLLELRQEIAKYLKKRFAVSYDPND---EIIVTVG 89 (378)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHhcCC-CC------CCCCCCcHHHHHHHHHHHHHHhCCCCCCCC---cEEEeCC
Confidence 356899988874 46677888877765321 12 344456788998888999887776 3432 6999999
Q ss_pred hH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCC-CCCCCCHHHHHHHHhhcCCcEE
Q 022564 122 SP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE-STGYIDYDQLEKSATLFRPKLI 199 (295)
Q Consensus 122 ~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~id~e~l~~~i~~~~tk~i 199 (295)
++ ++..++.+++++||+|+++++.|+.+. ..+...|..+..++ .+. +++.+|++++++++.+ +++++
T Consensus 90 ~~~al~~~~~~l~~~gd~vl~~~p~y~~~~--------~~~~~~g~~~~~~~--~~~~~~~~~d~~~l~~~~~~-~~~~v 158 (378)
T PRK07682 90 ASQALDVAMRAIINPGDEVLIVEPSFVSYA--------PLVTLAGGVPVPVA--TTLENEFKVQPAQIEAAITA-KTKAI 158 (378)
T ss_pred hHHHHHHHHHHhCCCCCEEEEeCCCchhhH--------HHHHHcCCEEEEee--cCCccCCCCCHHHHHhhcCc-ccEEE
Confidence 98 888788899999999999996665442 23334565444444 432 3578999999999976 89999
Q ss_pred EEcCCCCC--Ccc---CHHHHHHHHHHcCCEEEEEccccccccccCCC---CC-CCCcceEEEeCCCCCCCCC--ceEEE
Q 022564 200 VAGASAYA--RLY---DYERIRKVCNKQKAIMLADMAHISGLVAAGVI---PS-PFEYADVVTTTTHKSLRGP--RGAMI 268 (295)
Q Consensus 200 ~l~~~n~~--~~~---~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~---~~-~~~~~D~~~~s~~K~l~gp--~gG~l 268 (295)
+++.+||| ... ++++|.++|++|++++|+|+++.......... .. +.....+++.|++|+|+.| +-|++
T Consensus 159 ~~~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~ 238 (378)
T PRK07682 159 LLCSPNNPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEAYTSFASIKGMRERTILISGFSKGFAMTGWRLGFI 238 (378)
T ss_pred EEECCCCCcCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCCCCCChhhcccccCCEEEEecCcccccChhhhhhhh
Confidence 88866664 333 58899999999999999999976443321100 00 1112458899999988533 34999
Q ss_pred EEeCCchhhh
Q 022564 269 FFRKGVKEIN 278 (295)
Q Consensus 269 ~~~~~~~~~~ 278 (295)
++++++.+..
T Consensus 239 ~~~~~~i~~l 248 (378)
T PRK07682 239 AAPVYFSEAM 248 (378)
T ss_pred hcCHHHHHHH
Confidence 9988766543
No 84
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.82 E-value=3.8e-19 Score=167.41 Aligned_cols=200 Identities=17% Similarity=0.157 Sum_probs=136.9
Q ss_pred CHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCC--CCCCcceeEEeCCChH-HHHHHHHhhc-C
Q 022564 59 SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWGVNVQSLSGSP-SNFQVYTALL-K 134 (295)
Q Consensus 59 ~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~--~~~~~~~~v~~~sG~~-a~~~~~~al~-~ 134 (295)
|..+++++.+++.... .....|+...+..++++++.+++.+..|. +++ +|++|+|++ ++..++.+++ +
T Consensus 90 P~~~~~~~~~~~~~~~----~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~----~I~it~Ga~~al~~~~~~l~~~ 161 (481)
T PTZ00377 90 PADVVARAKEYLNAIG----GGTGAYTDSAGYPFVRKAVAAFIERRDGVPKDPS----DIFLTDGASSGIKLLLQLLIGD 161 (481)
T ss_pred CHHHHHHHHHHHHhCC----CcccCcCcccCCHHHHHHHHHHHHHhcCCCCChh----hEEEcCCHHHHHHHHHHHhccC
Confidence 3467777766554411 11223666678889999999999887775 554 899999999 8887888888 7
Q ss_pred CCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCC-CCCCCCHHHHHHHHhhc-----CCcEEEEcCCCCC-
Q 022564 135 PHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE-STGYIDYDQLEKSATLF-----RPKLIVAGASAYA- 207 (295)
Q Consensus 135 ~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~id~e~l~~~i~~~-----~tk~i~l~~~n~~- 207 (295)
+||+|+++.|.|+++ ...+...|..+..++ ++. +++.+|++++++++++. ++|+|++++||||
T Consensus 162 ~gD~Vlv~~P~y~~y--------~~~~~~~g~~~v~v~--~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPT 231 (481)
T PTZ00377 162 PSDGVMIPIPQYPLY--------SAAITLLGGKQVPYY--LDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPT 231 (481)
T ss_pred CCCEEEECCCCchhH--------HHHHHHcCCEEEEEE--eccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCC
Confidence 999999999555444 334456776655554 443 35689999999998642 6898888755554
Q ss_pred -CccC---HHHHHHHHHHcCCEEEEEccccccccccCC-CCC------CCCc------ceEEEeCCCCCC---CCCceEE
Q 022564 208 -RLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGV-IPS------PFEY------ADVVTTTTHKSL---RGPRGAM 267 (295)
Q Consensus 208 -~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~-~~~------~~~~------~D~~~~s~~K~l---~gp~gG~ 267 (295)
...+ +++|+++|++||++||+|+++..-....+. ... .+.. .-+++.|++|.+ +|.+.|+
T Consensus 232 G~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~ 311 (481)
T PTZ00377 232 GQVLTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGY 311 (481)
T ss_pred CcCCCHHHHHHHHHHHHHCCCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEE
Confidence 4444 889999999999999999997532221111 100 0110 125688999975 4777799
Q ss_pred EEE---eCCchh
Q 022564 268 IFF---RKGVKE 276 (295)
Q Consensus 268 l~~---~~~~~~ 276 (295)
+++ ++++.+
T Consensus 312 ~~~~~~p~~li~ 323 (481)
T PTZ00377 312 FELTNIPPEVRE 323 (481)
T ss_pred EEEeCCCHHHHH
Confidence 987 555544
No 85
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.82 E-value=8.2e-19 Score=161.21 Aligned_cols=227 Identities=14% Similarity=0.111 Sum_probs=153.4
Q ss_pred cccCHHHHHHHHHHHHHH-----HcCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHH
Q 022564 28 EVVDPEIADIIEHEKARQ-----WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKR 100 (295)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~-----~~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~ 100 (295)
...+.+.+..+.+..... .+.++|..|++. +++.+.+++.+.+.... . |+...+..++++++.++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~~--~------Y~~~~G~~~lr~aia~~ 76 (393)
T TIGR03538 5 SRLQPYPFEKLAALLAGVTPPASKPPIALSIGEPKHPTPAFVLEALRENLHGLS--T------YPTTKGLPELRQAIARW 76 (393)
T ss_pred hhCCccHHHHHHHHHHhhhhhcCCCeEEecCCCCCCCCCHHHHHHHHHHhhccC--C------CCCCCCCHHHHHHHHHH
Confidence 334455555555554422 467899888874 57888888887654311 1 34445567888888888
Q ss_pred HHHHcCC----CCCCcceeEEeCCChH-HHHHHHHhhcCCCCe--EEEecCCCCcccCccccccccccccceeeeEEEee
Q 022564 101 ALEAFRL----DPEKWGVNVQSLSGSP-SNFQVYTALLKPHDR--IMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPY 173 (295)
Q Consensus 101 la~~~g~----~~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~--Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 173 (295)
+.+.+|. ++++ +|++|+|++ ++..++.++++|||. |++++|.| ..+...+...|.++..++
T Consensus 77 ~~~~~~~~~~~~~~~---~i~it~Ga~~al~~~~~~l~~~gd~~~vlv~~P~y--------~~~~~~~~~~g~~~~~v~- 144 (393)
T TIGR03538 77 LERRFDLPTGVDPER---HVLPVNGTREALFAFAQAVINPGQAPLVVMPNPFY--------QIYEGAALLAGAEPYFLN- 144 (393)
T ss_pred HHHhhCCcccCCCCc---eEEECCCcHHHHHHHHHHHcCCCCcceEEecCCCC--------cchHHHHHhcCCeEEEee-
Confidence 8887664 4432 799999999 887788899999996 88888444 433334445665554444
Q ss_pred ecCC-CCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--Ccc---CHHHHHHHHHHcCCEEEEEccccccccccCCCCCC--
Q 022564 174 RLNE-STGYIDYDQLEKSATLFRPKLIVAGASAYA--RLY---DYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP-- 245 (295)
Q Consensus 174 ~~~~-~~~~id~e~l~~~i~~~~tk~i~l~~~n~~--~~~---~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~-- 245 (295)
++. +++.+|++++++++.+ ++|+|+++++||| ... .+++|+++|++|+++||+|+++..-.........+
T Consensus 145 -~~~~~~~~~d~~~l~~~~~~-~~k~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~ 222 (393)
T TIGR03538 145 -CTAENGFLPDFDAVPESVWR-RCQLLFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLL 222 (393)
T ss_pred -ccccCCCCCCHHHHHHHHhh-cceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHH
Confidence 442 3468999999998876 8999999866664 344 47889999999999999999975332211101100
Q ss_pred -----CC----cceEEEeCCCCCC--CCCceEEEEEeCCchh
Q 022564 246 -----FE----YADVVTTTTHKSL--RGPRGAMIFFRKGVKE 276 (295)
Q Consensus 246 -----~~----~~D~~~~s~~K~l--~gp~gG~l~~~~~~~~ 276 (295)
.. ..-+++.|++|.+ .|.+-|+++.++++.+
T Consensus 223 ~~~~~~~~~~~~~vi~i~S~SK~~~~~GlRvG~~i~~~~l~~ 264 (393)
T TIGR03538 223 QAAAQLGRDDFRRCLVFHSLSKRSNLPGLRSGFVAGDAEILK 264 (393)
T ss_pred HhcccccccccccEEEEecchhhcCCcccceEEEecCHHHHH
Confidence 00 0227899999965 4555599999877654
No 86
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.82 E-value=5.5e-19 Score=163.49 Aligned_cols=199 Identities=15% Similarity=0.126 Sum_probs=134.7
Q ss_pred CCCCCCCHHHHHHHhhhhhccCCC-CCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHh
Q 022564 53 PSENFTSVSVMQAVGSVMTNKYSE-GYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTA 131 (295)
Q Consensus 53 ~~~~~~~~~v~~al~~~l~~~~~~-g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~a 131 (295)
.+-++.++++++++.+++.. |.. .+.-. .+... ...+.+++.+++++|++. .+++++|++++..++ .
T Consensus 88 lg~s~l~~~vieAv~~~~~~-y~~l~~~l~---~g~~g--~r~~~le~~lA~l~gae~-----alvv~sg~aAi~l~l-~ 155 (454)
T TIGR00474 88 LGRAPLAEEAIEAVTDAARG-YSNLEYDLE---TGKRG--SRYSHVEGLLCELTGAED-----ALVVNNNAAAVLLAL-N 155 (454)
T ss_pred CCCCCCCHHHHHHHHHHHhc-ccchhcccc---ccccc--hHHHHHHHHHHHHhCCCc-----EEEECCHHHHHHHHH-H
Confidence 34456799999999998875 321 11100 01011 122346689999999976 677888888777555 5
Q ss_pred hcCCCCeEEEecCCCC---cccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEc-CCCC-
Q 022564 132 LLKPHDRIMALDLPHG---GHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASAY- 206 (295)
Q Consensus 132 l~~~gd~Vl~~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~-~~n~- 206 (295)
.+.+||+|++++.+|. +.+.... .+...|.++ +.++.+ ...|++++++++++ +|++|++. .+|+
T Consensus 156 ~l~~GdeVIvs~~e~v~~ggs~~i~~-----~~~~~G~~~--~~v~~~---~~~~l~dle~aI~~-~T~lv~~~h~sN~~ 224 (454)
T TIGR00474 156 TLAKGKEVIVSRGELVEIGGSFRIPD-----VMEQSGAKL--VEVGTT---NRTHLKDYEDAITE-NTALLLKVHTSNYR 224 (454)
T ss_pred HhCCcCEEEECCChhhhhcchhhHHH-----HHHHcCCEE--EEeCCC---CCCCHHHHHHhcCc-CCEEEEEEccCccc
Confidence 5799999999987753 3222211 223446444 333332 34689999999987 89998875 6665
Q ss_pred --C--CccCHHHHHHHHHHcCCEEEEEccccccccc----cCCCCC-----CC-CcceEEEeCCCCCCCCCceEEEEEeC
Q 022564 207 --A--RLYDYERIRKVCNKQKAIMLADMAHISGLVA----AGVIPS-----PF-EYADVVTTTTHKSLRGPRGAMIFFRK 272 (295)
Q Consensus 207 --~--~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~----~~~~~~-----~~-~~~D~~~~s~~K~l~gp~gG~l~~~~ 272 (295)
| ...|+++|+++||+||+++++|.+ .|.+. .++... ++ .|+|++++|+||||+||.+|++++++
T Consensus 225 ~~G~~~~~dl~~I~~la~~~g~~vivD~~--sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp~~G~i~g~~ 302 (454)
T TIGR00474 225 IVGFTEEVSIAELVALGREHGLPVMEDLG--SGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGPQAGIIVGKK 302 (454)
T ss_pred ccCCCCCCCHHHHHHHHHHcCCeEEEECC--CcccccchhccCCCCcccccHhHcCCCEEEecCccccCCCeEEEEEECH
Confidence 2 478999999999999999999975 44331 011111 11 26999999999999999999999998
Q ss_pred Cchh
Q 022564 273 GVKE 276 (295)
Q Consensus 273 ~~~~ 276 (295)
++.+
T Consensus 303 ~~i~ 306 (454)
T TIGR00474 303 ELIE 306 (454)
T ss_pred HHHH
Confidence 7654
No 87
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.82 E-value=6.6e-19 Score=141.99 Aligned_cols=163 Identities=22% Similarity=0.261 Sum_probs=116.2
Q ss_pred HHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeee
Q 022564 96 LCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYR 174 (295)
Q Consensus 96 ~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 174 (295)
++++.++++++.+.+ .+.+++|++ ++..++.++.+++++|+++++.|+++.. . .+...|.++..++
T Consensus 4 ~~~~~l~~~~~~~~~----~~~~~~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~--~-----~~~~~g~~~~~v~-- 70 (170)
T cd01494 4 ELEEKLARLLQPGND----KAVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYW--V-----AAELAGAKPVPVP-- 70 (170)
T ss_pred HHHHHHHHHcCCCCC----cEEEeCCcHHHHHHHHHHhCCCCCEEEEeecccceehh--h-----HHHhcCCEEEEec--
Confidence 356899999975554 566666766 8887888888889999999998888853 1 2224454454444
Q ss_pred cCCCC-CCCCHHHHHHHHhhcCCcEEEEcCCCC--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceE
Q 022564 175 LNEST-GYIDYDQLEKSATLFRPKLIVAGASAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADV 251 (295)
Q Consensus 175 ~~~~~-~~id~e~l~~~i~~~~tk~i~l~~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~ 251 (295)
.+..+ ...|.+.+++.....++++++++.+++ +...|+++|.++|+++|+++|+|++|..+............++|+
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~d~ 150 (170)
T cd01494 71 VDDAGYGGLDVAILEELKAKPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASPAPGVLIPEGGADV 150 (170)
T ss_pred cCCCCccchhhhhhhhccccCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEecccccccccccccccccccCCE
Confidence 33222 223334565554444788998874444 467789999999999999999999999887765221122235999
Q ss_pred EEeCCCCCCCCCceEEEEEe
Q 022564 252 VTTTTHKSLRGPRGAMIFFR 271 (295)
Q Consensus 252 ~~~s~~K~l~gp~gG~l~~~ 271 (295)
++.|+||+|++|++|++++|
T Consensus 151 ~~~s~~K~~~~~~~G~l~~~ 170 (170)
T cd01494 151 VTFSLHKNLGGEGGGVVIVK 170 (170)
T ss_pred EEEEcccccCCCceEEEEeC
Confidence 99999999998766999875
No 88
>PLN02231 alanine transaminase
Probab=99.81 E-value=1e-18 Score=165.37 Aligned_cols=236 Identities=14% Similarity=0.095 Sum_probs=159.3
Q ss_pred CCcchhccCc------ccccCHHHHHHHHHHHHHHHcCceecCCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchH
Q 022564 17 VTWPKQLNAP------LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYI 90 (295)
Q Consensus 17 ~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~ 90 (295)
-+|.+.+..- +.+.++..++.+.... ...+.|+|..+.+..|..+++.+.+.+.+.. + .....|+.+.+.
T Consensus 95 ~pf~~~~~~nig~p~~~~~~~~~~~r~v~~~~-~~p~~i~~~~~~~~fp~~~i~~a~~~l~~~~--~-~~~~~Y~~s~G~ 170 (534)
T PLN02231 95 YPFDEILYCNIGNPQSLGQQPITFFREVLALC-DHPSLLDKSETHGLFSADAIERAWQILDQIP--G-RATGAYSHSQGI 170 (534)
T ss_pred CChhhhhhhccCCHHHcCCCccHHHHHHHHhc-cCCccCCCCCccccCCHHHHHHHHHHHHhcC--C-ccccCcCCCCCc
Confidence 4555555433 3455666666666642 3346788877776667777777777665421 1 112236777888
Q ss_pred HHHHHHHHHHHHHHcCC--CCCCcceeEEeCCChH-HHHHHHHhhc-CCCCeEEEecCCCCcccCcccccccccccccee
Q 022564 91 DMAESLCQKRALEAFRL--DPEKWGVNVQSLSGSP-SNFQVYTALL-KPHDRIMALDLPHGGHLSHGYQTDTKKISAVSI 166 (295)
Q Consensus 91 ~~l~~~~~~~la~~~g~--~~~~~~~~v~~~sG~~-a~~~~~~al~-~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~ 166 (295)
.++++++.+++.+..|. +++ +|++|+|++ ++..++.+++ .+||.|+++.|.|+.+ ...+...|.
T Consensus 171 ~~lReaIA~~~~~r~g~~~~pe----~I~iT~Ga~~ai~~~~~~l~~~~gd~Vli~~P~Y~~y--------~~~~~~~g~ 238 (534)
T PLN02231 171 KGLRDAIAAGIEARDGFPADPN----DIFLTDGASPAVHMMMQLLIRSEKDGILCPIPQYPLY--------SASIALHGG 238 (534)
T ss_pred HHHHHHHHHHHHhccCCCCCcc----cEEEeCCHHHHHHHHHHHhccCCCCEEEEeCCCChhH--------HHHHHHcCC
Confidence 99999999999887775 555 899999999 8887888887 4899999999555544 334446665
Q ss_pred eeEEEeeecCC-CCCCCCHHHHHHHHhhc-----CCcEEEEcCCCCC-----CccCHHHHHHHHHHcCCEEEEEcccccc
Q 022564 167 FFETMPYRLNE-STGYIDYDQLEKSATLF-----RPKLIVAGASAYA-----RLYDYERIRKVCNKQKAIMLADMAHISG 235 (295)
Q Consensus 167 ~~~~v~~~~~~-~~~~id~e~l~~~i~~~-----~tk~i~l~~~n~~-----~~~~l~~I~~ia~~~~~~vivD~a~~~g 235 (295)
.+ +++++++ +++.+|+++|++++++. ++|++++++|+|| ....+++|+++|++||++||+|+++..-
T Consensus 239 ~~--v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l 316 (534)
T PLN02231 239 TL--VPYYLDEATGWGLEISELKKQLEDARSKGITVRALVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQEN 316 (534)
T ss_pred EE--EEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhc
Confidence 55 4444553 35799999999998642 5788888755554 3446779999999999999999997543
Q ss_pred ccccCCCCCCC---------C--cc-eEEEeCCCCCC---CCCceEEEEE
Q 022564 236 LVAAGVIPSPF---------E--YA-DVVTTTTHKSL---RGPRGAMIFF 270 (295)
Q Consensus 236 ~~~~~~~~~~~---------~--~~-D~~~~s~~K~l---~gp~gG~l~~ 270 (295)
....+.....+ . .. -+.+.|++|.+ +|.++|++.+
T Consensus 317 ~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~~ 366 (534)
T PLN02231 317 VYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEV 366 (534)
T ss_pred ccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccceEEEEE
Confidence 22111111010 0 11 25578999965 4788899976
No 89
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.81 E-value=2.4e-18 Score=159.62 Aligned_cols=204 Identities=13% Similarity=0.030 Sum_probs=144.9
Q ss_pred cCceecCCCC------CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCC--CCCCcceeEEe
Q 022564 47 KGLELIPSEN------FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWGVNVQS 118 (295)
Q Consensus 47 ~~i~L~~~~~------~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~--~~~~~~~~v~~ 118 (295)
+.|+|..|++ .+++++.+++.+.+......+ |+...+..++++++.+++.+.+|. +++ +|++
T Consensus 53 ~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~~~~~------Y~~~~G~~~lr~aia~~~~~~~~~~~~~~----~v~i 122 (430)
T PLN00145 53 PVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGKYNS------YSTCVGLLPARRAIAEYLSRDLPYELSTD----DIYL 122 (430)
T ss_pred CeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcCcCCC------CCCCccCHHHHHHHHHHHhhccCCCCChh----hEEE
Confidence 6799988876 247899999998876522112 344456788888888888776665 554 8999
Q ss_pred CCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCc
Q 022564 119 LSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPK 197 (295)
Q Consensus 119 ~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk 197 (295)
|+|++ ++..++.+++++||+|++++|.|+.+ ...+...|.++..+++.. .+++.+|++++++++++ +++
T Consensus 123 t~G~~~al~l~~~~l~~~Gd~Vlv~~P~y~~y--------~~~~~~~g~~~~~~~~~~-~~~~~~d~~~l~~~~~~-~~~ 192 (430)
T PLN00145 123 TAGCAQAIEIIMSVLAQPGANILLPRPGYPLY--------EARAVFSGLEVRHFDLLP-ERGWEVDLEGVEALADE-NTV 192 (430)
T ss_pred eCCHHHHHHHHHHHhcCCCCEEEEcCCCCccH--------HHHHHHcCCEEEEeeCCc-ccCCcCCHHHHHHHhCc-Cce
Confidence 99999 88878888999999999999655543 223345665565554322 24678999999998877 899
Q ss_pred EEEEcCCCCC--CccC---HHHHHHHHHHcCCEEEEEccccccccccCCCCCCC---Cc--ceEEEeCCCCCC--CCCce
Q 022564 198 LIVAGASAYA--RLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPF---EY--ADVVTTTTHKSL--RGPRG 265 (295)
Q Consensus 198 ~i~l~~~n~~--~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~---~~--~D~~~~s~~K~l--~gp~g 265 (295)
++++++|||| ...+ +++|+++|+++|++||+|+++..... .+....++ .. .-+++.|++|.+ .|.+-
T Consensus 193 ~i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~-~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pG~Rl 271 (430)
T PLN00145 193 AMVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTF-GSKPFVPMGVFGEVAPVLTLGSISKRWVVPGWRL 271 (430)
T ss_pred EEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhcc-CCCCccchhhhcccCcEEEEeccccccCCCCeeE
Confidence 9999866664 5555 78889999999999999999753322 11111111 11 237899999985 45566
Q ss_pred EEEEEe
Q 022564 266 AMIFFR 271 (295)
Q Consensus 266 G~l~~~ 271 (295)
|++++.
T Consensus 272 G~iv~~ 277 (430)
T PLN00145 272 GWIATC 277 (430)
T ss_pred EEEEEe
Confidence 999974
No 90
>PRK07324 transaminase; Validated
Probab=99.81 E-value=4.4e-19 Score=161.86 Aligned_cols=206 Identities=21% Similarity=0.215 Sum_probs=138.4
Q ss_pred cCceecCCCC--CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHc-CCCCCCcceeEEeCCChH
Q 022564 47 KGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAF-RLDPEKWGVNVQSLSGSP 123 (295)
Q Consensus 47 ~~i~L~~~~~--~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~-g~~~~~~~~~v~~~sG~~ 123 (295)
+.++|..+|+ .+|+.+ +++.+.+.+.. .+ |+...+..+++ +.+++++ +++++ +|++|+|++
T Consensus 27 ~~~~~~~~e~~~~~~~~~-~~~~~~~~~~~-~~------Y~~~~G~~~lr----~~ia~~~~~~~~~----~vi~t~G~~ 90 (373)
T PRK07324 27 CIDSLTLEELLALAGKNP-EAFYQELGQKK-LT------YGWIEGSPEFK----EAVASLYQNVKPE----NILQTNGAT 90 (373)
T ss_pred CCCCCcHHHHHhccCcch-HHHHHHHhcCC-cc------CCCCCCCHHHH----HHHHHHhcCCChh----hEEEcCChH
Confidence 4567777776 245666 77776665421 12 33334456666 5555555 46775 899999999
Q ss_pred -HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCC-CCCCCCHHHHHHHHhhcCCcEEEE
Q 022564 124 -SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE-STGYIDYDQLEKSATLFRPKLIVA 201 (295)
Q Consensus 124 -a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~id~e~l~~~i~~~~tk~i~l 201 (295)
++..++.+++++||+|+++.|.|..+. ..+...|.++..++ ++. +++.+|++++++.+++ ++|++++
T Consensus 91 ~al~~~~~~l~~~gd~Vl~~~P~y~~~~--------~~~~~~g~~v~~v~--~~~~~~~~~d~~~l~~~~~~-~~kli~i 159 (373)
T PRK07324 91 GANFLVLYALVEPGDHVISVYPTYQQLY--------DIPESLGAEVDYWQ--LKEENGWLPDLDELRRLVRP-NTKLICI 159 (373)
T ss_pred HHHHHHHHHhCCCCCEEEEcCCCchhHH--------HHHHHcCCEEEEEe--cccccCCCCCHHHHHHhCCC-CCcEEEE
Confidence 888888999999999999985554442 23345665555555 443 3467899999998876 8999999
Q ss_pred cCCCCC--CccC---HHHHHHHHHHcCCEEEEEccccccccccCCCCCCCC--cceEEEeCCCCCCC--CCceEEEEEeC
Q 022564 202 GASAYA--RLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE--YADVVTTTTHKSLR--GPRGAMIFFRK 272 (295)
Q Consensus 202 ~~~n~~--~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~--~~D~~~~s~~K~l~--gp~gG~l~~~~ 272 (295)
+.+||| ...+ +++|+++|++||+++|+|+++.. ....+....... ...+.+.|++|+++ |.+-|++++++
T Consensus 160 ~~p~NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y~~-l~~~~~~~s~~~~~~~~I~~~s~SK~~~~~G~RiG~i~~~~ 238 (373)
T PRK07324 160 NNANNPTGALMDRAYLEEIVEIARSVDAYVLSDEVYRP-LDEDGSTPSIADLYEKGISTNSMSKTYSLPGIRVGWIAANE 238 (373)
T ss_pred eCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccc-cccCCCCCChhhccCCEEEEecchhhcCCccceeEEEecCH
Confidence 865654 5556 88999999999999999999642 222111111111 13477899999875 55559999977
Q ss_pred Cchhhhcc
Q 022564 273 GVKEINKQ 280 (295)
Q Consensus 273 ~~~~~~~~ 280 (295)
++.+...+
T Consensus 239 ~li~~~~~ 246 (373)
T PRK07324 239 EVIDILRK 246 (373)
T ss_pred HHHHHHHH
Confidence 76554433
No 91
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.81 E-value=1.6e-18 Score=156.95 Aligned_cols=205 Identities=12% Similarity=0.061 Sum_probs=142.6
Q ss_pred ceecCCCC--CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCC--CCCCcceeEEeCCChH-
Q 022564 49 LELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWGVNVQSLSGSP- 123 (295)
Q Consensus 49 i~L~~~~~--~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~--~~~~~~~~v~~~sG~~- 123 (295)
++|..+.+ .+++.+.+++.+..... ..|+...+..++++++.+++.+.+|+ +++. +|++|+|++
T Consensus 3 ~~~~~g~p~~~~~~~~~~~~~~~~~~~--------~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~---~Iiit~Gs~~ 71 (350)
T TIGR03537 3 FDFGTGDPKEPTPPFIRKALIDAVPEV--------SQYPSALGTKALREAISGWFERRFGVKLDPDA---QVLPSAGSKE 71 (350)
T ss_pred EeccCCCCCCCCCHHHHHHHHHHHhcc--------CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC---cEEEcCChHH
Confidence 55665655 35788889888765321 12344456678888888988887785 4432 799999999
Q ss_pred HHHHHHHhhcCCC---CeEEEecCCCCcccCccccccccccccceeeeEEEeeecCC-CCCCCCHHHHHHHHhhcCCcEE
Q 022564 124 SNFQVYTALLKPH---DRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE-STGYIDYDQLEKSATLFRPKLI 199 (295)
Q Consensus 124 a~~~~~~al~~~g---d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~id~e~l~~~i~~~~tk~i 199 (295)
++..++.+++++| |+|+++.|.|+.+ ...+...|.++..++ ++. +++.+|++++++++++ ++|++
T Consensus 72 ai~~~~~~~~~~g~~~d~Vl~~~p~y~~~--------~~~~~~~g~~~~~v~--~~~~~~~~~d~~~l~~~~~~-~~~~i 140 (350)
T TIGR03537 72 AIFHFPLVFIDPEEDRRRVIFGTPGYPVY--------ERGALFAGGEPTAVK--LKKEDGFLLRLEKVEKSILE-ETKIV 140 (350)
T ss_pred HHHHHHHHHcCCCCCCceEEEcCCCCcch--------HHHHHhcCCEEEEcc--cCcccCCccCHHHHHHhhhh-ccEEE
Confidence 7777888888887 6999999555444 334456776554444 542 3567999999999987 89999
Q ss_pred EEcCCCCC--CccC---HHHHHHHHHHcCCEEEEEccccccccccCCCCCCC--C-cceEEEeCCCCCCC--CCceEEEE
Q 022564 200 VAGASAYA--RLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPF--E-YADVVTTTTHKSLR--GPRGAMIF 269 (295)
Q Consensus 200 ~l~~~n~~--~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~--~-~~D~~~~s~~K~l~--gp~gG~l~ 269 (295)
+++++||| ...+ +++|.++|++||+++|+|+++...... +...... . ...+++.|++|+++ |.+.|+++
T Consensus 141 ~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~-~~~~~~~~~~~~~~i~~~s~SK~~g~~GlRiG~~~ 219 (350)
T TIGR03537 141 WINYPHNPTGATAPRSYLKETIAMCREHGIILCSDECYTEIYFG-EPPHSALEVGIENVLAFHSLSKRSGMTGYRSGFVA 219 (350)
T ss_pred EEeCCCCCcCcccCHHHHHHHHHHHHHcCcEEEEeccccccccC-CCCCchhhcCcCCEEEEeecccccCCccccceeee
Confidence 99866664 5555 889999999999999999997643221 1111000 1 13478889999874 44459998
Q ss_pred EeCCchh
Q 022564 270 FRKGVKE 276 (295)
Q Consensus 270 ~~~~~~~ 276 (295)
.++++.+
T Consensus 220 ~~~~~~~ 226 (350)
T TIGR03537 220 GDEKLIS 226 (350)
T ss_pred cCHHHHH
Confidence 8766544
No 92
>PLN02187 rooty/superroot1
Probab=99.81 E-value=1.2e-18 Score=162.92 Aligned_cols=205 Identities=15% Similarity=0.101 Sum_probs=144.9
Q ss_pred HcCceecCCCCC------CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCC--CCCCcceeEE
Q 022564 46 WKGLELIPSENF------TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWGVNVQ 117 (295)
Q Consensus 46 ~~~i~L~~~~~~------~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~--~~~~~~~~v~ 117 (295)
++.|+|..|++. +++++.+++.+.+.... . ..|+...+..++++++.+++.+.++. +++ +|+
T Consensus 66 ~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~~~--~----~~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~~----~I~ 135 (462)
T PLN02187 66 KTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRSGK--G----NSYGPGAGILPARRAVADYMNRDLPHKLTPE----DIF 135 (462)
T ss_pred CCeEECCCCCCCCCCCCCCCHHHHHHHHHHHhCCC--C----CCCCCCCChHHHHHHHHHHHHHhcCCCCCcc----cEE
Confidence 367889888652 46789999988876421 1 12445566788888888888776654 665 899
Q ss_pred eCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCC
Q 022564 118 SLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRP 196 (295)
Q Consensus 118 ~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~t 196 (295)
+|+|++ ++..++.++++|||+|++++|.|+.+ ...+...|.++..+++. ..+++.+|++++++++++ ++
T Consensus 136 it~G~~~al~~~~~~l~~pGd~Vlv~~P~y~~y--------~~~~~~~g~~~~~~~l~-~~~~~~~d~~~l~~~~~~-~~ 205 (462)
T PLN02187 136 LTAGCNQGIEIVFESLARPNANILLPRPGFPHY--------DARAAYSGLEVRKFDLL-PEKEWEIDLEGIEAIADE-NT 205 (462)
T ss_pred EeCCHHHHHHHHHHHhcCCCCEEEEeCCCCccH--------HHHHHHcCCEEEEEeCc-cccCCccCHHHHHHhcCC-Cc
Confidence 999999 88878999999999999999665554 22344566656555542 224689999999999876 88
Q ss_pred cEEEEcCCCCC--Ccc---CHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCC---c--ceEEEeCCCCCCC--CCc
Q 022564 197 KLIVAGASAYA--RLY---DYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE---Y--ADVVTTTTHKSLR--GPR 264 (295)
Q Consensus 197 k~i~l~~~n~~--~~~---~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~---~--~D~~~~s~~K~l~--gp~ 264 (295)
++++++.|||| ... .+++|+++|++||++||+|+++..-... +....++. . .-+++.|++|.|+ |.+
T Consensus 206 ~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~-~~~~~s~~~~~~~~~vi~l~SfSK~f~~pGlR 284 (462)
T PLN02187 206 VAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFG-DNPFVSMGKFASIVPVLTLAGISKGWVVPGWK 284 (462)
T ss_pred EEEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccC-CCCceeHHHhccCCcEEEEecchhhcCCccce
Confidence 98988866664 444 4889999999999999999997542221 11111111 1 1367899999874 445
Q ss_pred eEEEEEe
Q 022564 265 GAMIFFR 271 (295)
Q Consensus 265 gG~l~~~ 271 (295)
-|++++.
T Consensus 285 iG~~v~~ 291 (462)
T PLN02187 285 IGWIALN 291 (462)
T ss_pred eEEEEec
Confidence 5999984
No 93
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.81 E-value=5.3e-19 Score=162.38 Aligned_cols=207 Identities=18% Similarity=0.188 Sum_probs=145.4
Q ss_pred cCceecCCCC--C-CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH
Q 022564 47 KGLELIPSEN--F-TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP 123 (295)
Q Consensus 47 ~~i~L~~~~~--~-~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~ 123 (295)
+.|+|..++. + +++.+.+++.+.+.+ +..++++..+ ..+..++++++++++++++|.+ + +|++++|++
T Consensus 43 ~~i~l~~~~~~~~~~~~~i~~a~~~~~~~-~~~~~~~~~~---~~G~~~l~~~l~~~la~~~g~~-~----~i~~tsG~~ 113 (397)
T PRK06939 43 EVINFCANNYLGLANHPELIAAAKAALDS-HGFGMASVRF---ICGTQDLHKELEEKLAKFLGTE-D----AILYSSCFD 113 (397)
T ss_pred eEEEeeccCccccCCCHHHHHHHHHHHHH-cCCCCccccc---ccCCcHHHHHHHHHHHHHhCCC-c----EEEEcChHH
Confidence 4588876652 2 688899999988765 2223322211 1233566777889999999976 3 899999977
Q ss_pred HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhh---c--CCcE
Q 022564 124 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL---F--RPKL 198 (295)
Q Consensus 124 a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~---~--~tk~ 198 (295)
++..++.+++++||+|++.++.|+++.. .+...+.++ +.++ ..|++++++.+++ . ++++
T Consensus 114 a~~~~~~~l~~~gd~vi~~~~~~~~~~~--------~~~~~~~~~--~~~~------~~d~~~l~~~i~~~~~~~~~~~~ 177 (397)
T PRK06939 114 ANGGLFETLLGKEDAIISDALNHASIID--------GVRLCKAKR--YRYA------NNDMADLEAQLKEAKEAGARHKL 177 (397)
T ss_pred HHHHHHHHhCCCCCEEEEEhhhhHHHHH--------HHHhcCCce--EEeC------CCCHHHHHHHHHhhhccCCCCeE
Confidence 7777888899999999999987776643 223444333 3222 1488999888863 2 5667
Q ss_pred EEEc-C-CCCCCccCHHHHHHHHHHcCCEEEEEccccccccccCC----CCCCC-CcceEEEeCCCCCCCCCceEEEEEe
Q 022564 199 IVAG-A-SAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGV----IPSPF-EYADVVTTTTHKSLRGPRGAMIFFR 271 (295)
Q Consensus 199 i~l~-~-~n~~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~----~~~~~-~~~D~~~~s~~K~l~gp~gG~l~~~ 271 (295)
|+.+ . +..|...++++|.++|++||+++|+|++|+.|...... ....+ ..+|++++|+||+|+|++||+++++
T Consensus 178 v~~~~v~~~~G~~~~~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~g~r~G~v~~~ 257 (397)
T PRK06939 178 IATDGVFSMDGDIAPLPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVMDRVDIITGTLGKALGGASGGYTAGR 257 (397)
T ss_pred EEEecCcCCCCCcCCHHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhCccCceEEEeC
Confidence 7765 2 22367789999999999999999999999766543210 00111 1478999999999988889999998
Q ss_pred CCchhhh
Q 022564 272 KGVKEIN 278 (295)
Q Consensus 272 ~~~~~~~ 278 (295)
+++.+..
T Consensus 258 ~~~~~~l 264 (397)
T PRK06939 258 KEVIDWL 264 (397)
T ss_pred HHHHHHH
Confidence 8766543
No 94
>PRK07683 aminotransferase A; Validated
Probab=99.81 E-value=2.1e-18 Score=158.12 Aligned_cols=232 Identities=13% Similarity=0.062 Sum_probs=157.6
Q ss_pred CcccccCHHHHHHHHHHHHHHHcCceecCCCC--CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHH
Q 022564 25 APLEVVDPEIADIIEHEKARQWKGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRAL 102 (295)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~--~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la 102 (295)
+++..+.+..+.............++|..+.+ ++++.+.+++.+.+.+.+ .+ |+...+..++++++.+++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~~-~~------Y~~~~g~~~lr~~ia~~l~ 79 (387)
T PRK07683 7 PRVKDIQISGIRQFSNMVQNYDNLISLTIGQPDFPTPSHVKEAAKRAITENY-TS------YTHNAGLLELRKAACNFVK 79 (387)
T ss_pred HHHHhCCccHHHHHHHHHHhcCCeEEecCCCCCCCCCHHHHHHHHHHHhcCC-CC------CCCCCCCHHHHHHHHHHHH
Confidence 34444455555555444333345688887766 346788899888876522 12 3334556788888888887
Q ss_pred HHcCC--CCCCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCC
Q 022564 103 EAFRL--DPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNEST 179 (295)
Q Consensus 103 ~~~g~--~~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~ 179 (295)
+.+|. +++. +|++|+|++ ++..++.+++++||+|+++.+.|+.+.. .+...|.++ ++++.+.++
T Consensus 80 ~~~g~~~~~~~---~I~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~--------~~~~~g~~~--~~~~~~~~~ 146 (387)
T PRK07683 80 DKYDLHYSPES---EIIVTIGASEAIDIAFRTILEPGTEVILPAPIYPGYEP--------IIRLCGAKP--VFIDTRSTG 146 (387)
T ss_pred HHhCCCCCCCC---cEEEeCChHHHHHHHHHHhCCCCCEEEEcCCCccchHH--------HHHHcCCEE--EEeecCccc
Confidence 76665 4532 699999999 8887888889999999999965555432 233556555 444455456
Q ss_pred CCCCHHHHHHHHhhcCCcEEEEcCCCCC--C---ccCHHHHHHHHHHcCCEEEEEccccccccccCC---CCC-CCCcce
Q 022564 180 GYIDYDQLEKSATLFRPKLIVAGASAYA--R---LYDYERIRKVCNKQKAIMLADMAHISGLVAAGV---IPS-PFEYAD 250 (295)
Q Consensus 180 ~~id~e~l~~~i~~~~tk~i~l~~~n~~--~---~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~---~~~-~~~~~D 250 (295)
+.+|.+++++.+++ ++++++++.+||| . ..++++|.++|+++|+++|+|+++......... ... ...+..
T Consensus 147 ~~~~~~~l~~~~~~-~~~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~v 225 (387)
T PRK07683 147 FRLTAEALENAITE-KTRCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPHTSIAHFPEMREKT 225 (387)
T ss_pred CCCCHHHHHHhcCc-CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCCcCChhhccCCcCCe
Confidence 78899999999876 8999988866664 3 345889999999999999999997754322111 111 011245
Q ss_pred EEEeCCCCCCCCC--ceEEEEEeCCchhh
Q 022564 251 VVTTTTHKSLRGP--RGAMIFFRKGVKEI 277 (295)
Q Consensus 251 ~~~~s~~K~l~gp--~gG~l~~~~~~~~~ 277 (295)
+++.|++|.|+.| +-|++++++++.+.
T Consensus 226 i~~~s~SK~~~~pGlRiG~i~~~~~l~~~ 254 (387)
T PRK07683 226 IVINGLSKSHSMTGWRIGFLFAPSYLAKH 254 (387)
T ss_pred EEEeeccccccCccceeEEEEcCHHHHHH
Confidence 8899999988534 34999998876543
No 95
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.81 E-value=1.9e-18 Score=158.65 Aligned_cols=232 Identities=14% Similarity=0.101 Sum_probs=156.8
Q ss_pred cCcccccCHHHHHHHHHHHHH----HHcCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHH
Q 022564 24 NAPLEVVDPEIADIIEHEKAR----QWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLC 97 (295)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~----~~~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~ 97 (295)
++++..+++..+..+.+..+. ....++|..+++. +++.+.+++.+.+.+.. . .|+...+...+++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~------~Y~~~~g~~~lr~~i 77 (393)
T PRK05764 5 SKRVSRVTPSATLAVTAKAKELKAQGRDVISLGAGEPDFDTPEHIKEAAIEALDDGK-T------KYTPAAGIPELREAI 77 (393)
T ss_pred hhhhhhcCchHHHHHHHHHHHHHhccCCEEEeCCCCCCCCCCHHHHHHHHHHHhcCC-C------CcCCCCChHHHHHHH
Confidence 455555556555444333221 2356888877774 46888888888775421 1 144445667888888
Q ss_pred HHHHHHHcCC--CCCCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeee
Q 022564 98 QKRALEAFRL--DPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYR 174 (295)
Q Consensus 98 ~~~la~~~g~--~~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 174 (295)
.+++.+.+|. +++ +|++|+|++ ++..++.+++++||.|+++++.|..+.. .+...|.++..++
T Consensus 78 a~~~~~~~~~~~~~~----~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~y~~~~~--------~~~~~g~~~~~~~-- 143 (393)
T PRK05764 78 AAKLKRDNGLDYDPS----QVIVTTGAKQALYNAFMALLDPGDEVIIPAPYWVSYPE--------MVKLAGGVPVFVP-- 143 (393)
T ss_pred HHHHHHHhCCCCCHH----HEEEeCCcHHHHHHHHHHhcCCCCEEEecCCCCcchHH--------HHHHcCCEEEEEe--
Confidence 8888777664 554 799999998 8777888889999999999976655432 3335565554454
Q ss_pred cCC-CCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--Cc---cCHHHHHHHHHHcCCEEEEEccccccccccC----CCCC
Q 022564 175 LNE-STGYIDYDQLEKSATLFRPKLIVAGASAYA--RL---YDYERIRKVCNKQKAIMLADMAHISGLVAAG----VIPS 244 (295)
Q Consensus 175 ~~~-~~~~id~e~l~~~i~~~~tk~i~l~~~n~~--~~---~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~----~~~~ 244 (295)
.+. +++.+|++++++++++ ++++++++.++|| .. .++++|.++|++||+++++|+++........ ....
T Consensus 144 ~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~ 222 (393)
T PRK05764 144 TGEENGFKLTVEQLEAAITP-KTKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASL 222 (393)
T ss_pred cCcccCCcCCHHHHHHhhCc-cceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHc
Confidence 442 3568999999999976 8899988855553 33 3588999999999999999999764322111 0000
Q ss_pred --CCCcceEEEeCCCCCCCCC--ceEEEEEeCCchhh
Q 022564 245 --PFEYADVVTTTTHKSLRGP--RGAMIFFRKGVKEI 277 (295)
Q Consensus 245 --~~~~~D~~~~s~~K~l~gp--~gG~l~~~~~~~~~ 277 (295)
...+.++++.|++|+++.| +.|+++.++++.+.
T Consensus 223 ~~~~~~~~i~~~s~SK~~~~~G~RiG~i~~~~~~~~~ 259 (393)
T PRK05764 223 SPELRDRTITVNGFSKAYAMTGWRLGYAAGPKELIKA 259 (393)
T ss_pred CCCCcCCEEEEecCcccccCccceeEEEecCHHHHHH
Confidence 1113678999999987534 34999988776543
No 96
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.81 E-value=8.1e-19 Score=158.37 Aligned_cols=193 Identities=20% Similarity=0.189 Sum_probs=134.2
Q ss_pred CHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCe
Q 022564 59 SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDR 138 (295)
Q Consensus 59 ~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~ 138 (295)
+|++++++.+++.+ +..+..+.+.+. ......+++++.+++++|++. .+++++|+.++.+++.+++++||+
T Consensus 17 ~~~v~~a~~~~~~~-~~~~~~~~~~~~---~~~~~~~~l~~~la~~~~~~~-----~iv~~sg~~a~~~~~~~~~~~gd~ 87 (349)
T cd06454 17 HPEVIEAAKEALDK-YGVGAGGSRLIS---GTSDLHEELEEELAEFHGKEA-----ALVFSSGYAANDGVLSTLAGKGDL 87 (349)
T ss_pred CHHHHHHHHHHHHH-hCCCCCCcCeec---CCchHHHHHHHHHHHHhCCCC-----EEEeccHHHHHHHHHHHhcCCCCE
Confidence 68999999999975 433222211111 123444556688999999863 688888877777678888999999
Q ss_pred EEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhh----cCCcEEEEcCCCC--CCccCH
Q 022564 139 IMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL----FRPKLIVAGASAY--ARLYDY 212 (295)
Q Consensus 139 Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~----~~tk~i~l~~~n~--~~~~~l 212 (295)
|+++++.|+++... +...|.++..+ + .+|.+++++++++ .++++++++.+++ |...|+
T Consensus 88 Vl~~~~~~~~~~~~--------~~~~g~~~~~~--~------~~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~~ 151 (349)
T cd06454 88 IISDSLNHASIIDG--------IRLSGAKKRIF--K------HNDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIAPL 151 (349)
T ss_pred EEEehhhhHHHHHH--------HHHcCCceEEe--c------CCCHHHHHHHHHHhhccCCCeEEEEeccccCCCCccCH
Confidence 99999877765432 22445444322 1 2578889988874 2567777764333 588899
Q ss_pred HHHHHHHHHcCCEEEEEccccccccccCC-----CCCCCCcceEEEeCCCCCCCCCceEEEEEeCCchhh
Q 022564 213 ERIRKVCNKQKAIMLADMAHISGLVAAGV-----IPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEI 277 (295)
Q Consensus 213 ~~I~~ia~~~~~~vivD~a~~~g~~~~~~-----~~~~~~~~D~~~~s~~K~l~gp~gG~l~~~~~~~~~ 277 (295)
++|.++|+++|+++|+|++|+.|...... ......++|++++|+||+|+. +||+++.++++.+.
T Consensus 152 ~~i~~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~-~gG~i~~~~~~~~~ 220 (349)
T cd06454 152 PELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGA-VGGYIAGSKELIDY 220 (349)
T ss_pred HHHHHHHHHcCCEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhcc-cCCEEECCHHHHHH
Confidence 99999999999999999999877653211 011112589999999998864 67888888776443
No 97
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.81 E-value=1.5e-18 Score=160.33 Aligned_cols=203 Identities=17% Similarity=0.145 Sum_probs=142.7
Q ss_pred HcCceecCCCC------CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcC--------CCCCC
Q 022564 46 WKGLELIPSEN------FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR--------LDPEK 111 (295)
Q Consensus 46 ~~~i~L~~~~~------~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g--------~~~~~ 111 (295)
.+.|+|..|++ ++++.+.+++.+.+.... ...|+...+..++++++.+++.+.++ ++++
T Consensus 33 ~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~~~------~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~~- 105 (412)
T PTZ00433 33 KSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQE------CNGYPPTVGSPEAREAVATYWRNSFVHKESLKSTIKKD- 105 (412)
T ss_pred CCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhcCC------CCCCCCCCCcHHHHHHHHHHHHhhccccccccCCCChh-
Confidence 46789987765 368889999988765411 11244445667888888888876543 5665
Q ss_pred cceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCC-CCCCCCHHHHHH
Q 022564 112 WGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE-STGYIDYDQLEK 189 (295)
Q Consensus 112 ~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~id~e~l~~ 189 (295)
+|++|+|++ ++..++.+++++||+|+++.|.|..+.. .+...|.++..++ +++ +++.+|++++++
T Consensus 106 ---~i~it~G~~~al~~~~~~~~~~gd~vlv~~P~y~~~~~--------~~~~~g~~~~~i~--~~~~~~~~~d~~~l~~ 172 (412)
T PTZ00433 106 ---NVVLCSGVSHAILMALTALCDEGDNILVPAPGFPHYET--------VCKAYGIEMRFYN--CRPEKDWEADLDEIRR 172 (412)
T ss_pred ---hEEEeCChHHHHHHHHHHhcCCCCEEEEccCCcccHHH--------HHHHcCCEEEEEe--cCccccCcCCHHHHHH
Confidence 899999999 8887888999999999999966655433 3345665555555 432 356899999999
Q ss_pred HHhhcCCcEEEEcCCCCC--C---ccCHHHHHHHHHHcCCEEEEEccccccccccCCC-CC--CCC--cceEEEeCCCCC
Q 022564 190 SATLFRPKLIVAGASAYA--R---LYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI-PS--PFE--YADVVTTTTHKS 259 (295)
Q Consensus 190 ~i~~~~tk~i~l~~~n~~--~---~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~-~~--~~~--~~D~~~~s~~K~ 259 (295)
++++ ++++|+++.+||| . ..++++|+++|++||++||+|+++.. ....+.. .. .+. ..-+++.|++|.
T Consensus 173 ~~~~-~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~-~~~~~~~~~~~~~~~~~~~~i~~~SfSK~ 250 (412)
T PTZ00433 173 LVDD-RTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAG-MVFNGATFTSVADFDTTVPRVILGGTAKN 250 (412)
T ss_pred Hhcc-CceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccc-cccCCCCccchhhccCCCceEEEccchhh
Confidence 8876 8999999866664 3 44577889999999999999999753 2221111 10 111 123778999998
Q ss_pred CC--CCceEEEEE
Q 022564 260 LR--GPRGAMIFF 270 (295)
Q Consensus 260 l~--gp~gG~l~~ 270 (295)
|+ |-+-|++++
T Consensus 251 ~~~pGlRlG~~i~ 263 (412)
T PTZ00433 251 LVVPGWRLGWLLL 263 (412)
T ss_pred cCCCCeeEEEEEE
Confidence 74 444499997
No 98
>PLN02721 threonine aldolase
Probab=99.81 E-value=7.2e-19 Score=159.02 Aligned_cols=204 Identities=17% Similarity=0.144 Sum_probs=135.0
Q ss_pred CceecCCCCC-CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHH
Q 022564 48 GLELIPSENF-TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNF 126 (295)
Q Consensus 48 ~i~L~~~~~~-~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~ 126 (295)
.++|..+++. +++.+.+++...... . ...+|. +...+ +++.+++++|.+. .+++++|+.++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~a~~~~~~~-~-----~~~~~~--~~~~~----l~~~la~~~~~~~-----~~~~~~Gs~a~~ 69 (353)
T PLN02721 7 VVDLRSDTVTKPTDAMRAAMANAEVD-D-----DVLGYD--PTALR----LEEEMAKIFGKEA-----ALFVPSGTMGNL 69 (353)
T ss_pred hhhhhcccccCCCHHHHHHHHhccCC-C-----cccCCC--HHHHH----HHHHHHHHhCCce-----eEEecCccHHHH
Confidence 4677777664 678888888653111 0 111121 22333 5588888899865 577778877666
Q ss_pred HHHHhhcC-CCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhh------cCCcEE
Q 022564 127 QVYTALLK-PHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL------FRPKLI 199 (295)
Q Consensus 127 ~~~~al~~-~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~------~~tk~i 199 (295)
.++.+++. +||+|+++++.|.+.+.... .+...|.++..+ +.+ +++.+|++++++.+++ .++++|
T Consensus 70 ~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~-----~~~~~g~~~~~v--~~~-~~~~~d~~~l~~~i~~~~~~~~~~~~~v 141 (353)
T PLN02721 70 ISVLVHCDVRGSEVILGDNSHIHLYENGG-----ISTLGGVHPRTV--KNN-EDGTMDLDAIEAAIRPKGDDHFPTTRLI 141 (353)
T ss_pred HHHHHHccCCCCeEEEcCccceehhcccc-----hhhhcCceeEec--CCC-cCCCcCHHHHHHHHHhccCCCCCcceEE
Confidence 67777777 99999999977643322100 122445444444 344 5678999999999973 278999
Q ss_pred EEc-CCCCC--CccC---HHHHHHHHHHcCCEEEEEccccccccc-cCCCCCCC-CcceEEEeCCCCCCCCCceEEEEEe
Q 022564 200 VAG-ASAYA--RLYD---YERIRKVCNKQKAIMLADMAHISGLVA-AGVIPSPF-EYADVVTTTTHKSLRGPRGAMIFFR 271 (295)
Q Consensus 200 ~l~-~~n~~--~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~-~~~~~~~~-~~~D~~~~s~~K~l~gp~gG~l~~~ 271 (295)
+++ .+|++ ...+ +++|.++|++||+++++|++|..+... .+.....+ .++|.++.++||+|++|.|++++.+
T Consensus 142 ~l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~~~G~~~~~~ 221 (353)
T PLN02721 142 CLENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGVPVHRLVKAADSVSVCLSKGLGAPVGSVIVGS 221 (353)
T ss_pred EEeccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCCCHHHHhhhCCEEEEecccccCCceeeEEecC
Confidence 996 44543 4444 789999999999999999998765422 12211111 2589999999999998877777777
Q ss_pred CCchh
Q 022564 272 KGVKE 276 (295)
Q Consensus 272 ~~~~~ 276 (295)
+++.+
T Consensus 222 ~~~~~ 226 (353)
T PLN02721 222 KSFIR 226 (353)
T ss_pred HHHHH
Confidence 76544
No 99
>PRK08363 alanine aminotransferase; Validated
Probab=99.81 E-value=2.2e-18 Score=158.60 Aligned_cols=203 Identities=16% Similarity=0.152 Sum_probs=142.1
Q ss_pred cCceecCCCC-----CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcC--CCCCCcceeEEeC
Q 022564 47 KGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR--LDPEKWGVNVQSL 119 (295)
Q Consensus 47 ~~i~L~~~~~-----~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g--~~~~~~~~~v~~~ 119 (295)
+.++|..|++ .+++.+.+++.+.+.... ..|+...+..++++++.+++.+.+| ++++ +|++|
T Consensus 31 ~~i~l~~g~p~~~~~~p~~~~~~~~~~~~~~~~-------~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~----~i~it 99 (398)
T PRK08363 31 KVIRLNIGDPVKFDFQPPEHMKEAYCRAIKEGH-------NYYGPSEGLPELREAIVKREKRKNGVDITPD----DVRVT 99 (398)
T ss_pred CeEEEeCCCCCcCCCCCCHHHHHHHHHHHHcCC-------CCCCCCCCcHHHHHHHHHHHHHhcCCCCChh----hEEEe
Confidence 5699988876 468899999988775421 1244445667888888888877766 4665 89999
Q ss_pred CChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcE
Q 022564 120 SGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKL 198 (295)
Q Consensus 120 sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~ 198 (295)
+|++ ++..++.+++++||.|+++++.|+++.. .+...|.....++ +.+.+++.+|++++++.+++ ++++
T Consensus 100 ~G~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~--------~~~~~g~~~v~~~-~~~~~~~~~d~~~l~~~~~~-~~~~ 169 (398)
T PRK08363 100 AAVTEALQLIFGALLDPGDEILIPGPSYPPYTG--------LVKFYGGVPVEYR-TIEEEGWQPDIDDIRKKITE-KTKA 169 (398)
T ss_pred CCHHHHHHHHHHHhCCCCCEEEEcCCCCcchHH--------HHHHcCCEEEEec-cccccCCcCCHHHHHhhCCc-ceEE
Confidence 9999 8887888999999999999976666543 3334454333331 24434567999999999876 8899
Q ss_pred EEEcCCCCC--CccC---HHHHHHHHHHcCCEEEEEccccccccccCCCC-CCCCc--ceEEEeCCCCCCCCC--ceEEE
Q 022564 199 IVAGASAYA--RLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIP-SPFEY--ADVVTTTTHKSLRGP--RGAMI 268 (295)
Q Consensus 199 i~l~~~n~~--~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~-~~~~~--~D~~~~s~~K~l~gp--~gG~l 268 (295)
++++.+||| ...+ +++|.++|+++|+++|+|+++........... ..+.. .-+++.|++|+++.| +-|++
T Consensus 170 v~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~ 249 (398)
T PRK08363 170 IAVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKHVSPGSLTKDVPVIVMNGLSKVYFATGWRLGYI 249 (398)
T ss_pred EEEECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCcccCHHHcCcCCcEEEEecchhccCCccceEEEE
Confidence 999855554 4444 88999999999999999999764322211100 00111 236689999986543 44999
Q ss_pred EE
Q 022564 269 FF 270 (295)
Q Consensus 269 ~~ 270 (295)
++
T Consensus 250 ~~ 251 (398)
T PRK08363 250 YF 251 (398)
T ss_pred EE
Confidence 98
No 100
>PRK04311 selenocysteine synthase; Provisional
Probab=99.81 E-value=1.2e-18 Score=161.69 Aligned_cols=203 Identities=12% Similarity=0.101 Sum_probs=134.5
Q ss_pred CCCCCCCHHHHHHHhhhhhccCCC-CCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHh
Q 022564 53 PSENFTSVSVMQAVGSVMTNKYSE-GYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTA 131 (295)
Q Consensus 53 ~~~~~~~~~v~~al~~~l~~~~~~-g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~a 131 (295)
.+-++.++++.+++.+++.+ |.. .+.. ..+..+ ...+.+++.+++++|++. .+++++|+.|+..++ .
T Consensus 93 lg~s~l~~~v~eav~~~~~~-~~~le~~l---~~g~~g--~r~~~~e~~lA~l~Gae~-----a~vv~sgtaAl~l~l-~ 160 (464)
T PRK04311 93 LGRALLSEAAIEAVTEAARG-YSNLEYDL---ATGKRG--SRDRALAALLCALTGAED-----ALVVNNNAAAVLLAL-N 160 (464)
T ss_pred CCCCCCCHHHHHHHHHHHhc-ccccccch---hhcccc--hHHHHHHHHHHHHhCCCe-----EEEECCHHHHHHHHH-H
Confidence 44556899999999988765 321 1100 001011 112346689999999875 678888887777555 4
Q ss_pred hcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEc-CCCC----
Q 022564 132 LLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASAY---- 206 (295)
Q Consensus 132 l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~-~~n~---- 206 (295)
.+.+||+|++++.+|...-... .. ...+...|.++..+ +.+ ...+++++++++++ +|++|++. .+|+
T Consensus 161 ~l~~GdeVIvs~~e~~~~ggs~-~i-~~~~~~~G~~l~~v--~~~---~~t~~~dle~aI~~-~TklV~~vh~sN~~i~G 232 (464)
T PRK04311 161 ALAAGKEVIVSRGELVEIGGAF-RI-PDVMRQAGARLVEV--GTT---NRTHLRDYEQAINE-NTALLLKVHTSNYRIEG 232 (464)
T ss_pred HhCCCCEEEEcchhhhhcCcch-hh-HHHHHHCCcEEEEE--CCC---CCCCHHHHHHhcCc-cCeEEEEEcCCCccccc
Confidence 4689999999986654321110 00 00122445444333 332 34689999999987 89998875 6664
Q ss_pred -CCccCHHHHHHHHHHcCCEEEEEccccccccc----cC--CCC---CCC-CcceEEEeCCCCCCCCCceEEEEEeCCch
Q 022564 207 -ARLYDYERIRKVCNKQKAIMLADMAHISGLVA----AG--VIP---SPF-EYADVVTTTTHKSLRGPRGAMIFFRKGVK 275 (295)
Q Consensus 207 -~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~----~~--~~~---~~~-~~~D~~~~s~~K~l~gp~gG~l~~~~~~~ 275 (295)
+...|+++|+++|++||+++++|+++ |.+. .+ ..+ .++ .|+|++++|+||||+||.+|++++++++.
T Consensus 233 ~~~~~dl~eI~~lak~~gi~vivD~gs--G~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~LgGp~~G~i~g~~~li 310 (464)
T PRK04311 233 FTKEVSLAELAALGKEHGLPVVYDLGS--GSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGGPQAGIIVGKKELI 310 (464)
T ss_pred cCCcCCHHHHHHHHHHcCCeEEEECCC--cccccchhccCCCCCchhhHHhcCCcEEEecCcccccCCceEEEEEcHHHH
Confidence 25679999999999999999999963 3221 11 011 112 26999999999999999999999998876
Q ss_pred hh
Q 022564 276 EI 277 (295)
Q Consensus 276 ~~ 277 (295)
+.
T Consensus 311 ~~ 312 (464)
T PRK04311 311 AR 312 (464)
T ss_pred HH
Confidence 53
No 101
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.80 E-value=1.5e-19 Score=162.97 Aligned_cols=174 Identities=19% Similarity=0.158 Sum_probs=127.8
Q ss_pred cCCcchHHHHHHHHHHHHHHHcCCC-CCCcceeEEeCCChH-HHHHHHHhhcC------------CC--CeEEEecCCCC
Q 022564 84 YGGNEYIDMAESLCQKRALEAFRLD-PEKWGVNVQSLSGSP-SNFQVYTALLK------------PH--DRIMALDLPHG 147 (295)
Q Consensus 84 ~~~~~~~~~l~~~~~~~la~~~g~~-~~~~~~~v~~~sG~~-a~~~~~~al~~------------~g--d~Vl~~~~~~~ 147 (295)
|+......++++++++++++++|++ .+. ++++|+|++ ++..++.++.. ++ +.|+++++.|.
T Consensus 30 y~~~~~~~~le~~~~~~~~~~~g~~~~~~---~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~ 106 (345)
T cd06450 30 WDESPAATEMEAEVVNWLAKLFGLPSEDA---DGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHV 106 (345)
T ss_pred cccCchhHHHHHHHHHHHHHHhCCCCCCC---CEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchh
Confidence 4455667889999999999999986 322 678888888 87767777632 33 47888887777
Q ss_pred cccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhc-----CCcEEEEcC-CCC-CCccCHHHHHHHHH
Q 022564 148 GHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF-----RPKLIVAGA-SAY-ARLYDYERIRKVCN 220 (295)
Q Consensus 148 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~-----~tk~i~l~~-~n~-~~~~~l~~I~~ia~ 220 (295)
++.... ...|.++..++ .+ +++.+|+++|++++++. ++++++++. +|+ |...|+++|+++|+
T Consensus 107 ~~~~~~--------~~~g~~~~~v~--~~-~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~ 175 (345)
T cd06450 107 SVEKAA--------AYLDVKVRLVP--VD-EDGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDPLEEIADLAE 175 (345)
T ss_pred HHHHHH--------HHHhcCeEEee--eC-CCCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCCHHHHHHHHH
Confidence 654322 24455555554 45 34689999999999641 577777763 333 58899999999999
Q ss_pred HcCCEEEEEccccccccccCCCC---CCCCcceEEEeCCCCCCCCCce-EEEEEe
Q 022564 221 KQKAIMLADMAHISGLVAAGVIP---SPFEYADVVTTTTHKSLRGPRG-AMIFFR 271 (295)
Q Consensus 221 ~~~~~vivD~a~~~g~~~~~~~~---~~~~~~D~~~~s~~K~l~gp~g-G~l~~~ 271 (295)
++|+++++|++|+.+..+..... ..+.++|++++|+|||+++|.| |+++++
T Consensus 176 ~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p~g~g~~~~~ 230 (345)
T cd06450 176 KYDLWLHVDAAYGGFLLPFPEPRHLDFGIERVDSISVDPHKYGLVPLGCSAVLVR 230 (345)
T ss_pred HhCCeEEEechhhHHHhhChhhHHHhcCccccCEEEEchhHhhCCCcchHHHHHH
Confidence 99999999999998876543222 1223589999999999999988 887655
No 102
>PLN02656 tyrosine transaminase
Probab=99.80 E-value=2.4e-18 Score=158.84 Aligned_cols=204 Identities=13% Similarity=0.017 Sum_probs=144.1
Q ss_pred HcCceecCCCC------CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCC--CCCCcceeEE
Q 022564 46 WKGLELIPSEN------FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWGVNVQ 117 (295)
Q Consensus 46 ~~~i~L~~~~~------~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~--~~~~~~~~v~ 117 (295)
.+.|+|..|++ .+|+.+++++.+++......+ |+...+..++++++.+++.+.+|. +++ +|+
T Consensus 31 ~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~------Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~----~i~ 100 (409)
T PLN02656 31 KRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFNG------YAPTVGLPQARRAIAEYLSRDLPYKLSLD----DVF 100 (409)
T ss_pred CeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCCCC------CCCCCCCHHHHHHHHHHHHHhcCCCCCcc----cEE
Confidence 47799998877 357899999988776522112 444456678888888888776664 554 899
Q ss_pred eCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCC-CCCCCCHHHHHHHHhhcC
Q 022564 118 SLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE-STGYIDYDQLEKSATLFR 195 (295)
Q Consensus 118 ~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~id~e~l~~~i~~~~ 195 (295)
+|+|++ ++..++.+++++||+|++++|.|+.+.. .+...|.++..++ +++ +++.+|++++++++++ +
T Consensus 101 ~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~--------~~~~~g~~~~~i~--~~~~~~~~~d~~~l~~~~~~-~ 169 (409)
T PLN02656 101 ITSGCTQAIDVALSMLARPGANILLPRPGFPIYEL--------CAAFRHLEVRYVD--LLPEKGWEVDLDAVEALADQ-N 169 (409)
T ss_pred EeCChHHHHHHHHHHHhCCCCeEEEeCCCCCcHHH--------HHHHcCCEEEEEe--CCCcCCCCCCHHHHHHHhcc-C
Confidence 999999 8777888889999999999976654422 2334565555555 432 3568999999999876 7
Q ss_pred CcEEEEcCCCCC--Cc---cCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCC---C--cceEEEeCCCCCCCC--C
Q 022564 196 PKLIVAGASAYA--RL---YDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPF---E--YADVVTTTTHKSLRG--P 263 (295)
Q Consensus 196 tk~i~l~~~n~~--~~---~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~---~--~~D~~~~s~~K~l~g--p 263 (295)
+++++++.|||| .. .++++|.++|++||++||+|+++..-... +....++ . ..-+++.|++|.|+. .
T Consensus 170 ~~~v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~-~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGl 248 (409)
T PLN02656 170 TVALVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFG-SNPFVPMGVFGSIVPVLTLGSLSKRWIVPGW 248 (409)
T ss_pred ceEEEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccC-CCCcccHHHhcccCcEEEEcccchhccCcce
Confidence 888888755664 33 46889999999999999999997532222 1111111 1 123678999998654 4
Q ss_pred ceEEEEEe
Q 022564 264 RGAMIFFR 271 (295)
Q Consensus 264 ~gG~l~~~ 271 (295)
+-|+++..
T Consensus 249 RiG~~i~~ 256 (409)
T PLN02656 249 RLGWFVTT 256 (409)
T ss_pred eEEEEEEe
Confidence 44999984
No 103
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=99.80 E-value=2.2e-18 Score=149.77 Aligned_cols=206 Identities=18% Similarity=0.096 Sum_probs=147.8
Q ss_pred cCceecCCCC------CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcC--CCCCCcceeEEe
Q 022564 47 KGLELIPSEN------FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR--LDPEKWGVNVQS 118 (295)
Q Consensus 47 ~~i~L~~~~~------~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g--~~~~~~~~~v~~ 118 (295)
..|.|..|++ .+++++.+|+.+++......+ |+.+.+....++++.+.+.+-+. .+++ .|++
T Consensus 62 ~iipl~~GDPsv~~~~~ts~~a~~Av~~al~Sgk~N~------Yaps~G~~~AR~AVAeYl~~~l~~kl~a~----DV~l 131 (447)
T KOG0259|consen 62 PILPLGHGDPSVYPCFRTSQEAEQAVVDALRSGKGNG------YAPSVGILPARRAVAEYLNRDLPNKLTAD----DVVL 131 (447)
T ss_pred eeccCCCCCCCccccccCCHHHHHHHHHHHhcCCCCC------cCCccccHHHHHHHHHHhhcCCCCccCcC----ceEE
Confidence 4577877766 368999999999987754444 44456666555444444333222 2555 7999
Q ss_pred CCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCc
Q 022564 119 LSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPK 197 (295)
Q Consensus 119 ~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk 197 (295)
|+|.+ |+..++.++.+||..||++. |+|++|..-+...|++++...+ +.++++++|++.+|+++++ +|.
T Consensus 132 tsGC~qAIe~~i~~LA~p~aNILlPr--------PGfp~Y~~~a~~~~lEVR~ydl-LPe~~weIDL~~veal~DE-NT~ 201 (447)
T KOG0259|consen 132 TSGCSQAIELAISSLANPGANILLPR--------PGFPLYDTRAIYSGLEVRYYDL-LPEKDWEIDLDGVEALADE-NTV 201 (447)
T ss_pred eccchHHHHHHHHHhcCCCCceecCC--------CCCchHHHhhhhcCceeEeecc-cCcccceechHHHHHhhcc-Cee
Confidence 99999 99889999999999999999 6666666555667766655554 3346789999999999987 998
Q ss_pred EEEEcCCCCC-----CccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCC----c-ceEEEeCCCCCC--CCCce
Q 022564 198 LIVAGASAYA-----RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE----Y-ADVVTTTTHKSL--RGPRG 265 (295)
Q Consensus 198 ~i~l~~~n~~-----~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~----~-~D~~~~s~~K~l--~gp~g 265 (295)
++++.+|+|| +...|++|+++|++++++||.|+.+.-- +..+....+.. - .-+.+++.+|-+ +||+-
T Consensus 202 AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~-vfg~~pfvpmg~fssiVPVitlggisKrW~VPGWRl 280 (447)
T KOG0259|consen 202 AIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHT-VFGDKPFVPMGKFSSIVPVITLGGISKRWIVPGWRL 280 (447)
T ss_pred EEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhccee-ecCCCCccchhhccccCceEeecccccccccCCcee
Confidence 8888655553 5667999999999999999999995432 22222222221 1 225678889944 68888
Q ss_pred EEEEEeCC
Q 022564 266 AMIFFRKG 273 (295)
Q Consensus 266 G~l~~~~~ 273 (295)
|+++.++.
T Consensus 281 GWi~~hD~ 288 (447)
T KOG0259|consen 281 GWIALHDP 288 (447)
T ss_pred eeEEEecc
Confidence 99999875
No 104
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.80 E-value=2.7e-18 Score=158.16 Aligned_cols=210 Identities=13% Similarity=0.028 Sum_probs=144.2
Q ss_pred HcCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCC--CCCCcceeEEeCCC
Q 022564 46 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWGVNVQSLSG 121 (295)
Q Consensus 46 ~~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~--~~~~~~~~v~~~sG 121 (295)
.+.++|..+.+. +++.+.+++.+.+.+.. ..|....+..++++++.+++++.+|. +++ +|++|+|
T Consensus 33 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~-------~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~----~i~~t~G 101 (402)
T PRK06107 33 RSIVDLTVGEPDFDTPDHIKQAAVAAIERGE-------TKYTLVNGTPALRKAIIAKLERRNGLHYADN----EITVGGG 101 (402)
T ss_pred CCEEEcCCCCCCCCCCHHHHHHHHHHHHcCC-------CCCCCCCCCHHHHHHHHHHHHHhcCCCCChh----hEEEeCC
Confidence 356889888774 46888888888775421 12455566788999999999988887 444 8999999
Q ss_pred hH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCC-CCCCCCHHHHHHHHhhcCCcEE
Q 022564 122 SP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE-STGYIDYDQLEKSATLFRPKLI 199 (295)
Q Consensus 122 ~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~id~e~l~~~i~~~~tk~i 199 (295)
++ ++..++.+++++||.|+++++.|+++.. .+...+.....+ +.+. +++.+|++++++++++ +++++
T Consensus 102 ~~~al~~~~~~~~~~gd~vl~~~p~y~~y~~--------~~~~~~~~~~~v--~~~~~~~~~~~~~~l~~~~~~-~~~~v 170 (402)
T PRK06107 102 AKQAIFLALMATLEAGDEVIIPAPYWVSYPD--------MVLANDGTPVIV--ACPEEQGFKLTPEALEAAITP-RTRWL 170 (402)
T ss_pred HHHHHHHHHHHhcCCCCEEEEecCCCcCHHH--------HHHHcCCEEEEe--cCCcccCCCCCHHHHHhhcCc-CceEE
Confidence 98 7776788889999999999976655532 222334333333 3432 3467999999999876 88988
Q ss_pred EEcCCCCC--Ccc---CHHHHHHHHHHc-CCEEEEEccccccccccCCCCC-----C-CCcceEEEeCCCCCCCCCc--e
Q 022564 200 VAGASAYA--RLY---DYERIRKVCNKQ-KAIMLADMAHISGLVAAGVIPS-----P-FEYADVVTTTTHKSLRGPR--G 265 (295)
Q Consensus 200 ~l~~~n~~--~~~---~l~~I~~ia~~~-~~~vivD~a~~~g~~~~~~~~~-----~-~~~~D~~~~s~~K~l~gp~--g 265 (295)
++++++|| ... ++++|+++|++| ++++|+|++++.-.......+. + ....-+++.|++|.|+.|. -
T Consensus 171 ~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRi 250 (402)
T PRK06107 171 ILNAPSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRI 250 (402)
T ss_pred EEECCCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCcccce
Confidence 88755553 444 467888889998 9999999997532211111110 0 0113477899999884343 3
Q ss_pred EEEEEeCCchhh
Q 022564 266 AMIFFRKGVKEI 277 (295)
Q Consensus 266 G~l~~~~~~~~~ 277 (295)
|++++++++.+.
T Consensus 251 G~~~~~~~~~~~ 262 (402)
T PRK06107 251 GYAAGPADLIAA 262 (402)
T ss_pred eeeecCHHHHHH
Confidence 999998876553
No 105
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.80 E-value=7.6e-19 Score=157.95 Aligned_cols=193 Identities=17% Similarity=0.196 Sum_probs=128.9
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCC
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHD 137 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd 137 (295)
+++.+++++.+.+.. . . .|+... ..+.+++.+++++| +.+ .+++++|+.++..++.+++++||
T Consensus 10 ~~~~v~~a~~~~~~~-~--~-----~~~~~~----~~~~l~~~~a~~~g-~~~----~~~~~~gt~a~~~~~~~l~~~gd 72 (338)
T cd06502 10 PTPEMLEAMAAANVG-D--D-----VYGEDP----TTAKLEARAAELFG-KEA----ALFVPSGTAANQLALAAHTQPGG 72 (338)
T ss_pred CCHHHHHHHHhcccC-C--c-----ccCCCH----HHHHHHHHHHHHhC-CCe----EEEecCchHHHHHHHHHhcCCCC
Confidence 688999999876532 1 0 122222 23345588999999 432 45554554488878889999999
Q ss_pred eEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhh------cCCcEEEEcCCCC-CC--
Q 022564 138 RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL------FRPKLIVAGASAY-AR-- 208 (295)
Q Consensus 138 ~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~------~~tk~i~l~~~n~-~~-- 208 (295)
+|+++++.|.++..... .+.+.|.++..++ .+ ++.+|++++++++++ .++++|+++++|+ |.
T Consensus 73 ~v~~~~~~~~~~~~~~~-----~~~~~g~~~~~v~--~~--~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~g~~~ 143 (338)
T cd06502 73 SVICHETAHIYTDEAGA-----PEFLSGVKLLPVP--GE--NGKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEGGTVY 143 (338)
T ss_pred eEEEecCcceeeecCCc-----HHHHcCceEEeec--CC--CCcCCHHHHHHHhhccCCCcCCcceEEEEEeecCCcccc
Confidence 99999987766542211 1123465454443 43 367999999999974 2688999985554 43
Q ss_pred -ccCHHHHHHHHHHcCCEEEEEccccccccc-cCCCCCCC-CcceEEEeCCCCCCCCCceEEEEEeCCchh
Q 022564 209 -LYDYERIRKVCNKQKAIMLADMAHISGLVA-AGVIPSPF-EYADVVTTTTHKSLRGPRGAMIFFRKGVKE 276 (295)
Q Consensus 209 -~~~l~~I~~ia~~~~~~vivD~a~~~g~~~-~~~~~~~~-~~~D~~~~s~~K~l~gp~gG~l~~~~~~~~ 276 (295)
..++++|.++|++||+++++|+||..+... .+.....+ .++|+++.|+||+|+.|.|++++.++++.+
T Consensus 144 ~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~g~~~~~~~~~~~ 214 (338)
T cd06502 144 PLDELKAISALAKENGLPLHLDGARLANAAAALGVALKTYKSGVDSVSFCLSKGGGAPVGAVVVGNRDFIA 214 (338)
T ss_pred CHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCCCHHHHHhcCCEEEEeccccCCCccceEEECCHHHHH
Confidence 456788999999999999999998644321 11111111 248999999999998887777777776544
No 106
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.80 E-value=5.3e-18 Score=156.31 Aligned_cols=233 Identities=18% Similarity=0.135 Sum_probs=150.3
Q ss_pred ccccCHHHHHHHHHHHHH----HHcCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHH
Q 022564 27 LEVVDPEIADIIEHEKAR----QWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKR 100 (295)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~----~~~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~ 100 (295)
+..++++.+..+.+.... ..+.++|..+++. +++.+.+++.+.+.... ...|+...+...++++++++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~p~~~~~~~~~~~~~~~~~~~~------~~~Y~~~~G~~~lR~~ia~~ 83 (403)
T PRK08636 10 IKRLPKYVFAEVNELKMAARRAGEDIIDFSMGNPDGPTPQHIIDKLCESAQKPK------THGYSVSKGIYKLRLAICNW 83 (403)
T ss_pred HHhCCccHHHHHHHHHHHHHhcCCCEEEcCCcCCCCCCCHHHHHHHHHHhcCCc------cCCCCCCCCCHHHHHHHHHH
Confidence 344455445444443221 1356888777653 46667777766543311 11244556678899899999
Q ss_pred HHHHcCC--CCCCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCC
Q 022564 101 ALEAFRL--DPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE 177 (295)
Q Consensus 101 la~~~g~--~~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 177 (295)
+.+.+|. ++++ +|++|+|++ ++..++.+++++||.|++++|.|+.+. ..+...|.++..++++.+
T Consensus 84 l~~~~~~~~~~~~---~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~--------~~~~~~g~~~~~v~~~~~- 151 (403)
T PRK08636 84 YKRKYNVDLDPET---EVVATMGSKEGYVHLVQAITNPGDVAIVPDPAYPIHS--------QAFILAGGNVHKMPLEYN- 151 (403)
T ss_pred HHHHhCCCCCCCC---eEEECCChHHHHHHHHHHhCCCCCEEEEcCCCCcchH--------HHHHhcCCEEEEEecccc-
Confidence 9888785 4431 599999999 888788999999999999996555543 344466765555554323
Q ss_pred CCCCCCHHHH----HHHHhh--cCCcEEEEcCCCCC-----CccCHHHHHHHHHHcCCEEEEEccccccccccCCCC--C
Q 022564 178 STGYIDYDQL----EKSATL--FRPKLIVAGASAYA-----RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIP--S 244 (295)
Q Consensus 178 ~~~~id~e~l----~~~i~~--~~tk~i~l~~~n~~-----~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~--~ 244 (295)
+++.+|++.+ +++++. .++++++++.|||| ....+++|.++|++|+++||+|+++..-.......+ .
T Consensus 152 ~~~~~d~~~l~~~l~~~~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~ 231 (403)
T PRK08636 152 EDFELDEDQFFENLEKALRESSPKPKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSIL 231 (403)
T ss_pred ccCccChhhhhhHHHHHHhhccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCChh
Confidence 3568888754 555542 36888888865664 344567889999999999999999764322211101 0
Q ss_pred CCCc---ceEEEeCCCCCCC--CCceEEEEEeCCchhh
Q 022564 245 PFEY---ADVVTTTTHKSLR--GPRGAMIFFRKGVKEI 277 (295)
Q Consensus 245 ~~~~---~D~~~~s~~K~l~--gp~gG~l~~~~~~~~~ 277 (295)
.+.. .-+.+.|++|.|+ |.+.|+++.++++.+.
T Consensus 232 ~~~~~~~~~i~~~S~SK~~~~~GlRiG~iv~~~~li~~ 269 (403)
T PRK08636 232 EVEGAKDVAVESYTLSKSYNMAGWRVGFVVGNKKLVGA 269 (403)
T ss_pred cCCCccccEEEEEecccccCCccceeeeeeCCHHHHHH
Confidence 1111 2245789999884 5555999998876543
No 107
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.80 E-value=3.7e-18 Score=158.26 Aligned_cols=212 Identities=17% Similarity=0.250 Sum_probs=143.1
Q ss_pred CHHHHHHHHHHHHHHHcCceecCCCCC-------CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHH
Q 022564 31 DPEIADIIEHEKARQWKGLELIPSENF-------TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALE 103 (295)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~i~L~~~~~~-------~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~ 103 (295)
...++....++.........|..|++. .+++..+++.+.+...+. ..+ ....+ +++.+++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~a~~~~~~~~~~--------~~G-~~~~~----fe~~lA~ 74 (438)
T PRK15407 8 RQQILELVREYAELAHAPKPFVPGKSPIPPSGKVIDAKELQNLVDASLDFWL--------TTG-RFNDA----FEKKLAE 74 (438)
T ss_pred HHHHHHHHHHHHHHhcccccccCCCCCCCcCccCCCHHHHHHHHHHHHhCcc--------cCC-hhHHH----HHHHHHH
Confidence 344566666655555555566667662 234444555554443110 111 22333 4488888
Q ss_pred HcCCCCCCcceeEEeCCChHHHHHHHHhh---------cCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeee
Q 022564 104 AFRLDPEKWGVNVQSLSGSPSNFQVYTAL---------LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYR 174 (295)
Q Consensus 104 ~~g~~~~~~~~~v~~~sG~~a~~~~~~al---------~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 174 (295)
++|.+. .+++++|+.++..++.++ ++|||+|+++.+.|.++..+. ...|... +.++
T Consensus 75 ~~g~~~-----~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v--------~~~G~~p--v~vd 139 (438)
T PRK15407 75 FLGVRY-----ALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPI--------IQNGLVP--VFVD 139 (438)
T ss_pred HhCCCe-----EEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHHHH--------HHcCCEE--EEEe
Confidence 899864 455556666777666654 589999999998887665433 2455444 5545
Q ss_pred cCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEe
Q 022564 175 LNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTT 254 (295)
Q Consensus 175 ~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~ 254 (295)
++.+++.+|++++++++++ +|++|+++.+ .|...++++|.++|++||++||+|++|+.|....+.....+ .|+.++
T Consensus 140 vd~~~~~id~~~le~~i~~-~tkaVi~~~~-~G~p~dl~~I~~la~~~gi~vIeDaa~a~G~~~~g~~~G~~--gd~~~f 215 (438)
T PRK15407 140 VELPTYNIDASLLEAAVSP-KTKAIMIAHT-LGNPFDLAAVKAFCDKHNLWLIEDNCDALGSTYDGRMTGTF--GDIATL 215 (438)
T ss_pred cCCCcCCcCHHHHHHHcCc-CCeEEEEeCC-CCChhhHHHHHHHHHHCCCEEEEECccchhhhcCCeeeecc--CceEEE
Confidence 6656789999999999987 8999988632 35567899999999999999999999999988766432222 477777
Q ss_pred CCC--CCCCCCceEEEEEeCCc
Q 022564 255 TTH--KSLRGPRGAMIFFRKGV 274 (295)
Q Consensus 255 s~~--K~l~gp~gG~l~~~~~~ 274 (295)
|+| |.+....||+++++++.
T Consensus 216 Sf~~~k~~~~geGG~l~t~d~~ 237 (438)
T PRK15407 216 SFYPAHHITMGEGGAVFTNDPL 237 (438)
T ss_pred eCCCCCCccccCceEEEECCHH
Confidence 665 66766668999998763
No 108
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.80 E-value=3.7e-18 Score=157.58 Aligned_cols=205 Identities=12% Similarity=0.034 Sum_probs=142.9
Q ss_pred HcCceecCCCC------CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCC--CCCCcceeEE
Q 022564 46 WKGLELIPSEN------FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWGVNVQ 117 (295)
Q Consensus 46 ~~~i~L~~~~~------~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~--~~~~~~~~v~ 117 (295)
.+.|+|..|++ .+|+.+.+++.+.+......+ |+...+..++++++.+++.+.+|. +++ +|+
T Consensus 32 ~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~~~~~~------Y~~~~G~~~lr~aia~~~~~~~g~~~~~~----~I~ 101 (409)
T PLN00143 32 RLAISFGFGDPSCFECFRTTNIAEDAIVEAVRSAKFNS------YAPTGGILPARRAIADYLSNDLPYQLSPD----DVY 101 (409)
T ss_pred CceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhCcCCCC------CCCCCCCHHHHHHHHHHHHhhcCCCCCHh----hEE
Confidence 36788888776 468888899988776421111 444456678888888888777654 665 899
Q ss_pred eCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCC
Q 022564 118 SLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRP 196 (295)
Q Consensus 118 ~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~t 196 (295)
+|+|++ ++..++.+++++||.|++++|.|+.+. ..+...|.++..+++. +.+++.+|++++++++++ ++
T Consensus 102 it~G~~~al~~~~~~l~~~gd~v~v~~P~y~~~~--------~~~~~~g~~~~~~~~~-~~~~~~~d~~~l~~~~~~-~~ 171 (409)
T PLN00143 102 LTLGCKHAAEIIIKVLARPEANILLPRPGFPDVE--------TYAIFHHLEIRHFDLL-PEKGWEVDLDAVEAIADE-NT 171 (409)
T ss_pred EecChHHHHHHHHHHHcCCCCEEEEcCCCCcCHH--------HHHHHcCCEEEEEecc-CCCCCcCCHHHHHHhccc-CC
Confidence 999999 888788999999999999996555543 2334566555444431 224568999999998876 78
Q ss_pred cEEEEcCCCCC--Ccc---CHHHHHHHHHHcCCEEEEEccccccccccCCCCCCC---Cc--ceEEEeCCCCCCC--CCc
Q 022564 197 KLIVAGASAYA--RLY---DYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPF---EY--ADVVTTTTHKSLR--GPR 264 (295)
Q Consensus 197 k~i~l~~~n~~--~~~---~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~---~~--~D~~~~s~~K~l~--gp~ 264 (295)
+++++++|||| ... .+++|+++|++|+++||+|+++..-... +....++ .. .-+++.|++|.|+ |.+
T Consensus 172 ~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~-~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlR 250 (409)
T PLN00143 172 IAMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFG-SKPFVPMGLFASIVPVITLGSISKRWMIPGWG 250 (409)
T ss_pred EEEEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccC-CCCCcchhhhcccCcEEEEccchhhcCCCccc
Confidence 88888756664 444 4778889999999999999996532221 1111111 11 2378999999864 445
Q ss_pred eEEEEEe
Q 022564 265 GAMIFFR 271 (295)
Q Consensus 265 gG~l~~~ 271 (295)
-|++++.
T Consensus 251 vG~~v~~ 257 (409)
T PLN00143 251 LGWLVTC 257 (409)
T ss_pred eEEEEee
Confidence 5999984
No 109
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.79 E-value=2.5e-18 Score=155.45 Aligned_cols=160 Identities=18% Similarity=0.195 Sum_probs=118.9
Q ss_pred HHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhh-cCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeec
Q 022564 97 CQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTAL-LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL 175 (295)
Q Consensus 97 ~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al-~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 175 (295)
+++.+++++|.+. .+++++|+.++..++.++ +++||+|+++.+.|.++..+. ...|.++..+ ++
T Consensus 23 ~~~~la~~~~~~~-----~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~~~~~--------~~~g~~~~~~--~~ 87 (352)
T cd00616 23 FEKAFAEYLGVKY-----AVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVATANAI--------LLLGATPVFV--DI 87 (352)
T ss_pred HHHHHHHHhCCCe-----EEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHHHH--------HHcCCeEEEE--ec
Confidence 4588888898642 555665655877788888 689999999998887765432 2456444444 45
Q ss_pred CCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeC
Q 022564 176 NESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTT 255 (295)
Q Consensus 176 ~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s 255 (295)
+++++.+|++++++.+++ ++++|+++. ..|...|+++|.++|+++|+++|+|++|+.|....+..... ..|+.++|
T Consensus 88 ~~~~~~~d~~~l~~~i~~-~~~~v~~~~-~~G~~~~~~~i~~l~~~~~i~li~D~a~~~g~~~~~~~~~~--~~d~~~~S 163 (352)
T cd00616 88 DPDTYNIDPELIEAAITP-RTKAIIPVH-LYGNPADMDAIMAIAKRHGLPVIEDAAQALGATYKGRKVGT--FGDAGAFS 163 (352)
T ss_pred CCCcCCcCHHHHHHhcCc-CCeEEEEEC-CCCCcCCHHHHHHHHHHcCCeEEEECCCCCCCeECCEEccc--CcceeEEc
Confidence 544688999999999976 899998863 24778899999999999999999999999887654321111 25777777
Q ss_pred CC--CCCCCCceEEEEEeC-Cch
Q 022564 256 TH--KSLRGPRGAMIFFRK-GVK 275 (295)
Q Consensus 256 ~~--K~l~gp~gG~l~~~~-~~~ 275 (295)
+| |+++++.||++++++ ++.
T Consensus 164 ~~~~K~~~~~~gg~~~~~~~~~~ 186 (352)
T cd00616 164 FHPTKNLTTGEGGAVVTNDEELA 186 (352)
T ss_pred CCCCCCCcccCceEEEECCHHHH
Confidence 55 999888888888875 443
No 110
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.79 E-value=1.6e-18 Score=171.65 Aligned_cols=169 Identities=15% Similarity=0.079 Sum_probs=132.5
Q ss_pred chHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-----HHHHHHHhhcCC-CC----eEEEecCCCCcccCcccccc
Q 022564 88 EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-----SNFQVYTALLKP-HD----RIMALDLPHGGHLSHGYQTD 157 (295)
Q Consensus 88 ~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-----a~~~~~~al~~~-gd----~Vl~~~~~~~~~~~~~~~~~ 157 (295)
++..++...+++++++++|.+ .|.++.+++ ++..++.++.++ || +|+++..+|+++..++.
T Consensus 564 ~g~~~~~~~~r~~la~i~g~~------~v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~--- 634 (993)
T PLN02414 564 QGYQEMFEDLGDLLCEITGFD------SFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASAA--- 634 (993)
T ss_pred HHHHHHHHHHHHHHHHHhCCC------eEEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHHHHH---
Confidence 345667778999999999994 577766666 666688888866 88 89999999999987665
Q ss_pred ccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhh--cCCcEEEEc-CCCCC-CccCHHHHHHHHHHcCCEEEEEcccc
Q 022564 158 TKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL--FRPKLIVAG-ASAYA-RLYDYERIRKVCNKQKAIMLADMAHI 233 (295)
Q Consensus 158 ~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~--~~tk~i~l~-~~n~~-~~~~l~~I~~ia~~~~~~vivD~a~~ 233 (295)
..|.+++.++ .+ +++.+|+++|++++++ .+|++|+++ ++|.+ ...|+++|+++||++|+++++|++|.
T Consensus 635 -----~~G~~vv~v~--~d-~~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDgAq~ 706 (993)
T PLN02414 635 -----MCGMKIVVVG--TD-AKGNINIEELRKAAEAHKDNLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDGANM 706 (993)
T ss_pred -----HCCCEEEEec--cC-CCCCcCHHHHHHHHhccCCCeEEEEEECCCccccccchHHHHHHHHHHcCCEEEEEecCH
Confidence 4565565565 55 5789999999999984 267888887 45555 77789999999999999999999998
Q ss_pred ccccccC-CCCCCCCcceEEEeCCCCCCCCCc-----e-EEEEEeCCchh
Q 022564 234 SGLVAAG-VIPSPFEYADVVTTTTHKSLRGPR-----G-AMIFFRKGVKE 276 (295)
Q Consensus 234 ~g~~~~~-~~~~~~~~~D~~~~s~~K~l~gp~-----g-G~l~~~~~~~~ 276 (295)
.+..... .... |+|++++|+||||++|. | |++++++.+..
T Consensus 707 ~a~~~l~~p~~~---GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~L~p 753 (993)
T PLN02414 707 NAQVGLTSPGFI---GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAP 753 (993)
T ss_pred HhccCcCCcccc---CCCEEEecCCccCCcCcccCCCCeeeEEEchhhcc
Confidence 8774432 2233 49999999999998554 5 99999987543
No 111
>PRK09265 aminotransferase AlaT; Validated
Probab=99.79 E-value=9.1e-18 Score=154.82 Aligned_cols=202 Identities=18% Similarity=0.116 Sum_probs=135.4
Q ss_pred cCceecCCCC-----CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHc--CCCCCCcceeEEeC
Q 022564 47 KGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAF--RLDPEKWGVNVQSL 119 (295)
Q Consensus 47 ~~i~L~~~~~-----~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~--g~~~~~~~~~v~~~ 119 (295)
+.++|..|.+ .+++.+.+++.+.+... .+ |+...+..++++++.+++.+.. +++++ +|+++
T Consensus 34 ~~i~l~~g~p~~~~~~~~~~i~~~~~~~~~~~--~~------Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~----~i~~t 101 (404)
T PRK09265 34 KILKLNIGNPAPFGFEAPDEILRDVIRNLPTA--QG------YSDSKGLFSARKAIMQYYQQKGIPDVDVD----DIYIG 101 (404)
T ss_pred CeEEecCCCCCcCCCCCCHHHHHHHHHHhhcC--CC------CCCCCCcHHHHHHHHHHHhccCCCCCCcc----cEEEe
Confidence 5689987644 25778888887765431 12 3344555677766666654432 56776 89999
Q ss_pred CChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCC-CCCCCCHHHHHHHHhhcCCc
Q 022564 120 SGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE-STGYIDYDQLEKSATLFRPK 197 (295)
Q Consensus 120 sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~id~e~l~~~i~~~~tk 197 (295)
+|++ ++..++.+++++||+|+++++.|+.+.. .+...|.....++ .+. +++.+|++++++.+++ +++
T Consensus 102 ~G~~~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~--------~~~~~g~~~v~~~--~~~~~~~~~d~~~l~~~~~~-~~~ 170 (404)
T PRK09265 102 NGVSELIVMAMQALLNNGDEVLVPAPDYPLWTA--------AVSLSGGKPVHYL--CDEEAGWFPDLDDIRSKITP-RTK 170 (404)
T ss_pred CChHHHHHHHHHHhCCCCCEEEEeCCCCcChHH--------HHHHcCCEEEEEe--cccccCCCCCHHHHHHhccc-cce
Confidence 9999 7777888899999999999977765433 2234454443343 332 3567999999999876 899
Q ss_pred EEEEcCCCCC--CccC---HHHHHHHHHHcCCEEEEEccccccccccCCCCC--CCC-c-ceEEEeCCCCCCC--CCceE
Q 022564 198 LIVAGASAYA--RLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPS--PFE-Y-ADVVTTTTHKSLR--GPRGA 266 (295)
Q Consensus 198 ~i~l~~~n~~--~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~--~~~-~-~D~~~~s~~K~l~--gp~gG 266 (295)
+|+++.+||| ...+ +++|.++|++||++||+|+++..-......... .+. . .-+++.|++|.++ |.+-|
T Consensus 171 ~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG 250 (404)
T PRK09265 171 AIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHISIASLAPDLLCVTFNGLSKAYRVAGFRVG 250 (404)
T ss_pred EEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHHHcCCCceEEEEecchhhccCcccceE
Confidence 9988755553 5566 889999999999999999997532211111110 011 1 2256789999884 44559
Q ss_pred EEEEe
Q 022564 267 MIFFR 271 (295)
Q Consensus 267 ~l~~~ 271 (295)
+++..
T Consensus 251 ~~v~~ 255 (404)
T PRK09265 251 WMVLS 255 (404)
T ss_pred EEEEe
Confidence 99863
No 112
>PRK09148 aminotransferase; Validated
Probab=99.79 E-value=1.1e-17 Score=154.33 Aligned_cols=230 Identities=14% Similarity=0.142 Sum_probs=147.3
Q ss_pred cccCHHHHHHHHHHHHH----HHcCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHH
Q 022564 28 EVVDPEIADIIEHEKAR----QWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA 101 (295)
Q Consensus 28 ~~~~~~~~~~~~~~~~~----~~~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~l 101 (295)
+.+.++++..+.+.... ..+.|+|..+++. +++.+.+++.+.+.+... ..|+...+..++++++.+++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~------~~Y~~~~G~~~lr~aia~~~ 81 (405)
T PRK09148 8 RRLPPYVFEQVNRLKAAARAAGADIIDLGMGNPDLPTPQHIVDKLCETAQDPRT------HRYSASKGIPGLRRAQAAYY 81 (405)
T ss_pred hcCCccHHHHHHHHHHHHHhcCCCeEEcCCCCCCCCCCHHHHHHHHHHHcCccc------CCCCCCCCCHHHHHHHHHHH
Confidence 44555566555443322 1356889887763 468888888776643111 12444456678888888888
Q ss_pred HHHcCC--CCCCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCC
Q 022564 102 LEAFRL--DPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES 178 (295)
Q Consensus 102 a~~~g~--~~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 178 (295)
.+.+|. +++. +|++|+|++ ++..++.+++++||.|++++|.|+.+.. .+...|.++..++ .+.+
T Consensus 82 ~~~~g~~~~~~~---~I~it~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~--------~~~~~g~~v~~v~--~~~~ 148 (405)
T PRK09148 82 ARRFGVKLNPDT---QVVATLGSKEGFANMAQAITAPGDVILCPNPSYPIHAF--------GFIMAGGVIRSVP--AEPD 148 (405)
T ss_pred HHHhCCCCCCCC---cEEEcCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHH--------HHHhcCCEEEEEe--CCCC
Confidence 877675 4432 699999999 8887888999999999999966665532 2335565554454 4422
Q ss_pred -CCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccC---HHHHHHHHHHcCCEEEEEccccccccccCCCCC--CCC---
Q 022564 179 -TGYIDYDQLEKSATLFRPKLIVAGASAYA--RLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPS--PFE--- 247 (295)
Q Consensus 179 -~~~id~e~l~~~i~~~~tk~i~l~~~n~~--~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~--~~~--- 247 (295)
.+..++++..+...+ ++++++++.|||| ...+ +++|.++|++||++||+|+++..-.......+. .+.
T Consensus 149 ~~~~~~l~~~~~~~~~-~~~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~ 227 (405)
T PRK09148 149 EEFFPALERAVRHSIP-KPIALIVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAK 227 (405)
T ss_pred CCCccCHHHHHhhccc-cceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCcc
Confidence 233444444333334 7899999866664 4444 568889999999999999997643221111110 011
Q ss_pred cceEEEeCCCCCCC--CCceEEEEEeCCchhh
Q 022564 248 YADVVTTTTHKSLR--GPRGAMIFFRKGVKEI 277 (295)
Q Consensus 248 ~~D~~~~s~~K~l~--gp~gG~l~~~~~~~~~ 277 (295)
...+++.|++|.++ |.+-|+++.++++.+.
T Consensus 228 ~~~i~~~SfSK~~~~pGlR~G~~v~~~~~i~~ 259 (405)
T PRK09148 228 DVTVEFTSMSKTFSMAGWRMGFAVGNERLIAA 259 (405)
T ss_pred CcEEEEeccccccCCcchheeeeeCCHHHHHH
Confidence 13466899999875 4445999998876553
No 113
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.79 E-value=6.3e-18 Score=154.10 Aligned_cols=196 Identities=15% Similarity=0.120 Sum_probs=132.3
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhhc---
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALL--- 133 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al~--- 133 (295)
+.+.+.+++...+.... +.+. .|. ....+++.+++++++++|++++ ++++++|++ ++..++.++.
T Consensus 32 ~~~~~~~a~~~~~~~~~--~~~~--~~~---~~~~~~~~~~~~la~~~g~~~~----~~~~~~g~~~~~~~~~~~~~~~~ 100 (373)
T TIGR03812 32 PHPIAVKAYDMFIETNL--GDPG--LFP---GTKKIEEEVVGSLGNLLHLPDA----YGYIVSGGTEANIQAVRAAKNLA 100 (373)
T ss_pred chHHHHHHHHHHhhcCC--CCcc--cCc---cHHHHHHHHHHHHHHHhCCCCC----CeEEeccHHHHHHHHHHHHHHHH
Confidence 45556777777654422 3332 122 2346667889999999999765 566677777 7665655543
Q ss_pred ---CCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCc-EEEEcCCCC-CC
Q 022564 134 ---KPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPK-LIVAGASAY-AR 208 (295)
Q Consensus 134 ---~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk-~i~l~~~n~-~~ 208 (295)
.+||+|+++++.|.++.. .+...|.++..++ .+ .++.+|++++++++++ ++. +++++++|+ |.
T Consensus 101 ~~~~~g~~vl~~~~~h~~~~~--------~~~~~G~~~~~v~--~~-~~~~~d~~~l~~~l~~-~~~~vv~~~~~~~tG~ 168 (373)
T TIGR03812 101 REEKRTPNIIVPESAHFSFEK--------AAEMLGLELRYAP--LD-EDYTVDVKDVEDLIDD-NTIGIVGIAGTTELGQ 168 (373)
T ss_pred hccCCCcEEEECCcchHHHHH--------HHHHcCCeEEEEe--eC-CCCCcCHHHHHHHHhh-CcEEEEEECCCCCCCc
Confidence 477999999977765422 3345676665555 44 4678999999999977 664 444454333 58
Q ss_pred ccCHHHHHHHHHHcCCEEEEEccccccccccC---CC----CCCCCcceEEEeCCCCCCCCCce-E-EEEEeCCchh
Q 022564 209 LYDYERIRKVCNKQKAIMLADMAHISGLVAAG---VI----PSPFEYADVVTTTTHKSLRGPRG-A-MIFFRKGVKE 276 (295)
Q Consensus 209 ~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~---~~----~~~~~~~D~~~~s~~K~l~gp~g-G-~l~~~~~~~~ 276 (295)
..|+++|.++|+++|+++++|+||+.+.++.. .. .....++|++++|+|||+.+|.+ | +++.++++.+
T Consensus 169 ~~~~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K~~~~~~~~G~~~~~~~~~~~ 245 (373)
T TIGR03812 169 IDDIEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQSITIDPHKMGLSPIPAGGILFRSKSYLK 245 (373)
T ss_pred cCCHHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCccccCCCCCEEEECccccCCCcCCceEEEEeCHHHHh
Confidence 88999999999999999999999986654321 11 11122689999999998766644 4 5555665543
No 114
>PRK06855 aminotransferase; Validated
Probab=99.78 E-value=1.6e-17 Score=154.37 Aligned_cols=204 Identities=14% Similarity=0.092 Sum_probs=139.3
Q ss_pred cCceecCCCC-----CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCC--CCCCcceeEEeC
Q 022564 47 KGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWGVNVQSL 119 (295)
Q Consensus 47 ~~i~L~~~~~-----~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~--~~~~~~~~v~~~ 119 (295)
+.++|..|++ .+|+.+.+++.+.+.+.. ...|+...+..++++++.+++++.+|+ +++ +|++|
T Consensus 33 ~~~~~~~G~p~~~~~~~p~~~~~a~~~~~~~~~------~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~----~I~it 102 (433)
T PRK06855 33 KITWENIGDPIAKGEKIPDWMKEIVAELVMDDK------SYGYCPTKGVLETREFLAELNNKRGGAQITPD----DIIFF 102 (433)
T ss_pred cccccccCCCcccCCCCCHHHHHHHHHHhhcCC------CCCCCCCCCCHHHHHHHHHHHHhccCCCCCHh----HEEEc
Confidence 5688877776 568888888888764311 112455567788999999999887775 565 89999
Q ss_pred CChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCC-CCCCCCHHHHHHHHhh-cCC
Q 022564 120 SGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE-STGYIDYDQLEKSATL-FRP 196 (295)
Q Consensus 120 sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~id~e~l~~~i~~-~~t 196 (295)
+|++ ++..++ .++++||.|++++|.|+.+... . ....|... +++++++ +++.+|+++++++++. .++
T Consensus 103 ~G~~~al~~~~-~l~~~Gd~Vlv~~P~Y~~~~~~-~------~~~~g~~~--v~v~~~~~~~~~~d~~~l~~~~~~~~~~ 172 (433)
T PRK06855 103 NGLGDAIAKIY-GLLRREARVIGPSPAYSTHSSA-E------AAHAGYPP--VTYRLDPENNWYPDLDDLENKVKYNPSI 172 (433)
T ss_pred CcHHHHHHHHH-HhcCCCCeEEEeCCCCchHHHH-H------HHhcCCeE--EEEecccccCCCCCHHHHHHHHhcCCCc
Confidence 9999 776555 4789999999999777654211 0 11224333 4444543 3568999999999863 267
Q ss_pred cEEEEcCCCCC--C---ccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCC----C-cceEEEeCCCCCC--CCCc
Q 022564 197 KLIVAGASAYA--R---LYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPF----E-YADVVTTTTHKSL--RGPR 264 (295)
Q Consensus 197 k~i~l~~~n~~--~---~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~----~-~~D~~~~s~~K~l--~gp~ 264 (295)
+++++++|||| . ...+++|.++|++||++||+|+++..-... +....++ . +.-+++.|++|.| +|.+
T Consensus 173 ~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~-~~~~~sl~~~~~~~~~I~~~S~SK~~~~pGlR 251 (433)
T PRK06855 173 AGILLINPDNPTGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYN-GKKTVPLSEVIGDVPGIALKGISKELPWPGSR 251 (433)
T ss_pred eEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccC-CCCCCCHHHHcCcCCeEEEecCccccCCCcce
Confidence 88888755664 3 345678888999999999999996533221 1111111 1 1237899999988 4666
Q ss_pred eEEEEEe
Q 022564 265 GAMIFFR 271 (295)
Q Consensus 265 gG~l~~~ 271 (295)
.|+++..
T Consensus 252 iG~ii~p 258 (433)
T PRK06855 252 CGWIEVY 258 (433)
T ss_pred EEEEEEe
Confidence 7999973
No 115
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.78 E-value=6.3e-18 Score=153.06 Aligned_cols=203 Identities=13% Similarity=0.131 Sum_probs=141.4
Q ss_pred CceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-H
Q 022564 48 GLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-S 124 (295)
Q Consensus 48 ~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a 124 (295)
.++|+.|++. +|+.+.+++.+.+.......| +. ....+ +|+.++++++++++ +|++|+|++ +
T Consensus 24 ~~~l~~~~~~~~~p~~~~~a~~~~~~~~~~~~y------~~-~~~~~----lr~~ia~~~~~~~~----~i~it~G~~~~ 88 (351)
T PRK14807 24 KYKMDANETPFELPEEVIKNIQEIVKSSQVNIY------PD-PTAEK----LREELARYCSVVPT----NIFVGNGSDEI 88 (351)
T ss_pred eeEccCCCCCCCCCHHHHHHHHHHhhcCcccCC------CC-ccHHH----HHHHHHHHhCCCcc----cEEEecCHHHH
Confidence 3678777774 689999999887753111122 21 12233 45778888899886 899999999 7
Q ss_pred HHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCC
Q 022564 125 NFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGAS 204 (295)
Q Consensus 125 ~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~ 204 (295)
+..++.+++++||+|++++|.|+.+ ...+...|.++..+ +.+ +++.+|++++++++++.++|+|+++++
T Consensus 89 l~~~~~~l~~~gd~Vlv~~p~y~~~--------~~~~~~~g~~~~~v--~~~-~~~~~d~~~l~~~~~~~~~k~v~l~~p 157 (351)
T PRK14807 89 IHLIMLAFINKGDVVIYPHPSFAMY--------SVYSKIAGAVEIPV--KLK-EDYTYDVGSFIKVIEKYQPKLVFLCNP 157 (351)
T ss_pred HHHHHHHhcCCCCEEEEeCCChHHH--------HHHHHHcCCeEEEe--ecC-CCCCCCHHHHHHHhhccCCCEEEEeCC
Confidence 7768888899999999999655433 22333556555444 455 457899999999997558999999856
Q ss_pred CC--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCC--cceEEEeCCCCCCC--CCceEEEEEeCCchhhh
Q 022564 205 AY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE--YADVVTTTTHKSLR--GPRGAMIFFRKGVKEIN 278 (295)
Q Consensus 205 n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~--~~D~~~~s~~K~l~--gp~gG~l~~~~~~~~~~ 278 (295)
+| |...+.+++.++|++++.++|+|+++.. .......+ .+. ...+++.|++|.++ |.+-|+++.++++.+..
T Consensus 158 ~NPtG~~~~~~~l~~l~~~~~~~~ivDe~y~~-~~~~~~~~-~~~~~~~vi~~~S~SK~~~~~GlRiG~~v~~~~~~~~~ 235 (351)
T PRK14807 158 NNPTGSVIEREDIIKIIEKSRGIVVVDEAYFE-FYGNTIVD-VINEFENLIVLRTLSKAFGLAGLRVGYAVANENILKYL 235 (351)
T ss_pred CCCCCCCCCHHHHHHHHHhCCCEEEEeCcchh-hcccchHH-HhhhCCCEEEEecchHhcccchhceeeeecCHHHHHHH
Confidence 65 4788999999999998899999999742 22111100 011 13488999999874 44459999987765543
No 116
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.78 E-value=4.7e-18 Score=159.88 Aligned_cols=213 Identities=11% Similarity=0.077 Sum_probs=142.5
Q ss_pred cCceecCCCCCC-CHHHHHHHhhhhh----cc-CCCCCCCCcccCCcchHHHHHHHHHHHHHHHcC----CCCCCcceeE
Q 022564 47 KGLELIPSENFT-SVSVMQAVGSVMT----NK-YSEGYPGARYYGGNEYIDMAESLCQKRALEAFR----LDPEKWGVNV 116 (295)
Q Consensus 47 ~~i~L~~~~~~~-~~~v~~al~~~l~----~~-~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g----~~~~~~~~~v 116 (295)
..|+|...||.. -+.+.+.+.+... .. -...++....|+...+..++++++.+++.+.+| ++++ +|
T Consensus 47 g~i~l~~aEN~l~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~g~~v~v~pe----~I 122 (496)
T PLN02376 47 GIIQMGLAENQLCLDLIKDWVKENPEASICTLEGIHQFSDIANFQDYHGLKKFRQAIAHFMGKARGGKVTFDPE----RV 122 (496)
T ss_pred ceEEeecchhhhhHHHHHHHHHhCchhhccccccccccchhhccCCCCCcHHHHHHHHHHHHHHhCCCCcCChh----hE
Confidence 469999999965 3333444433221 10 011234444567777888999999999998877 6776 89
Q ss_pred EeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccc-cceeeeEEEeeecCC-CCCCCCHHHHHHHHhh
Q 022564 117 QSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKIS-AVSIFFETMPYRLNE-STGYIDYDQLEKSATL 193 (295)
Q Consensus 117 ~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~v~~~~~~-~~~~id~e~l~~~i~~ 193 (295)
++|+|++ ++..++.++++|||.|++++|.|+++.. .+. ..|.++ ++++++. +++.+|+++++++++.
T Consensus 123 vit~Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~~--------~~~~~~G~~v--v~v~~~~~~~~~~~~~~le~a~~~ 192 (496)
T PLN02376 123 VMSGGATGANETIMFCLADPGDVFLIPSPYYAAFDR--------DLRWRTGVEI--IPVPCSSSDNFKLTVDAADWAYKK 192 (496)
T ss_pred EEccchHHHHHHHHHHhCCCCCEEEECCCCccchHH--------HHHhhCCCEE--EEEeCCCCccCcCCHHHHHHHHHH
Confidence 9999999 8888899999999999999966666543 222 246444 4444542 4578999999876431
Q ss_pred -----cCCcEEEEcCCCCC--Ccc---CHHHHHHHHHHcCCEEEEEccccccccccCCCCC--------CCCc--ce--E
Q 022564 194 -----FRPKLIVAGASAYA--RLY---DYERIRKVCNKQKAIMLADMAHISGLVAAGVIPS--------PFEY--AD--V 251 (295)
Q Consensus 194 -----~~tk~i~l~~~n~~--~~~---~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~--------~~~~--~D--~ 251 (295)
.++|+|++++|||| ... .+++|+++|++|+++||+|++++.-.+....... +..+ .+ +
T Consensus 193 a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~ 272 (496)
T PLN02376 193 AQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIH 272 (496)
T ss_pred HHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCcccHHHhhccccccccCCCeEE
Confidence 36899999866664 444 4667889999999999999997653322211100 0000 12 4
Q ss_pred EEeCCCCCCC--CCceEEEEEeCC
Q 022564 252 VTTTTHKSLR--GPRGAMIFFRKG 273 (295)
Q Consensus 252 ~~~s~~K~l~--gp~gG~l~~~~~ 273 (295)
++.|++|.|+ |.+-|+++..++
T Consensus 273 vv~S~SK~~glpGlRvG~li~~~~ 296 (496)
T PLN02376 273 IVYSLSKDMGLPGFRVGIVYSFND 296 (496)
T ss_pred EEEeccccCCCCcceEEEEEECCH
Confidence 5799999884 455599998543
No 117
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.78 E-value=2.9e-18 Score=156.23 Aligned_cols=211 Identities=14% Similarity=0.072 Sum_probs=146.4
Q ss_pred CceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCC--CCCCcceeEEeCCChH
Q 022564 48 GLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWGVNVQSLSGSP 123 (295)
Q Consensus 48 ~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~--~~~~~~~~v~~~sG~~ 123 (295)
.++|+.++++ +++.+++++.+.+..... . ...|+. .+...+++++.+++.+.+|. +++ +|++|+|++
T Consensus 28 ~i~l~~~~~~~~~~~~~~~al~~~l~~~~~-~---~~~Y~~-~g~~~lr~aia~~~~~~~~~~~~~~----~I~it~G~~ 98 (368)
T PRK03317 28 PVRLNTNENPYPPSPALVADIAEAVAEAAA-G---LNRYPD-RDAVALRADLAAYLTAQTGVGLTVE----NVWAANGSN 98 (368)
T ss_pred eeEecCCCCCCCCCHHHHHHHHHHHhhhhh-h---hccCCC-CchHHHHHHHHHHhhhhccCCCChh----hEEECCCHH
Confidence 4889888874 688899999887643110 0 011322 24567887788888777664 665 899999999
Q ss_pred -HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEc
Q 022564 124 -SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 202 (295)
Q Consensus 124 -a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~ 202 (295)
++..++.+++++||.|+++.|.|+.+ ...+...|. +.++++.+ +++.+|++++++++++.++++++++
T Consensus 99 ~~l~~~~~~~~~~gd~v~v~~P~y~~~--------~~~~~~~g~--~~~~~~~~-~~~~~d~~~l~~~~~~~~~~~i~l~ 167 (368)
T PRK03317 99 EILQQLLQAFGGPGRTALGFVPSYSMH--------PIIARGTHT--EWVEGPRA-ADFTLDVDAAVAAIAEHRPDVVFLT 167 (368)
T ss_pred HHHHHHHHHhcCCCCEEEEeCCChHHH--------HHHHHhcCC--eeEEcccC-CCCCCCHHHHHHHHhccCCCEEEEe
Confidence 88878889999999999999555544 323334453 33544444 4678999999999975578999888
Q ss_pred CCCC--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCC-C--cceEEEeCCCCCCC--CCceEEEEEeCCch
Q 022564 203 ASAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPF-E--YADVVTTTTHKSLR--GPRGAMIFFRKGVK 275 (295)
Q Consensus 203 ~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~-~--~~D~~~~s~~K~l~--gp~gG~l~~~~~~~ 275 (295)
++|| |...+.+++.++++..++++|+|++|..-..........+ . ...+++.|++|.++ |.+-|++++++++.
T Consensus 168 ~p~NPtG~~~~~~~l~~l~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~~~~~~ 247 (368)
T PRK03317 168 SPNNPTGTALPLDDVEAILDAAPGIVVVDEAYAEFRRSGTPSALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLAAAPAVV 247 (368)
T ss_pred CCCCCCCCCCCHHHHHHHHHHCCceEEEeCCchhhcccCCcCHHHHHHhCCCEEEEEechhhhccchhhhhhhhCCHHHH
Confidence 6666 4888999999999999999999999863211110000000 0 12367889999885 33449999988766
Q ss_pred hhh
Q 022564 276 EIN 278 (295)
Q Consensus 276 ~~~ 278 (295)
+..
T Consensus 248 ~~l 250 (368)
T PRK03317 248 DAL 250 (368)
T ss_pred HHH
Confidence 543
No 118
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.78 E-value=1.6e-17 Score=151.45 Aligned_cols=184 Identities=14% Similarity=0.097 Sum_probs=130.6
Q ss_pred CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhh-cC
Q 022564 57 FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTAL-LK 134 (295)
Q Consensus 57 ~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al-~~ 134 (295)
..+++..+++.+.+...+. ++.. .+.+++.+++++++|.+ .+++++|++ ++..++.++ ++
T Consensus 8 ~~~~~e~~a~~~~~~~~~~--------~~~g----~~~~~~e~~la~~~g~~------~~v~~~sgt~aL~~~l~al~~~ 69 (376)
T TIGR02379 8 PVTGQELEYIAEAISEGKL--------SGDG----PFSRRCETWLENRTGTK------KALLTPSCTAALEMAALLLDIQ 69 (376)
T ss_pred CCCHHHHHHHHHHHHcCCc--------cCCc----HHHHHHHHHHHHHhCCC------eEEEeCCHHHHHHHHHHHcCCC
Confidence 3567778888888866331 1111 23334558888888875 466777777 776677777 89
Q ss_pred CCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCCCccCHHH
Q 022564 135 PHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYER 214 (295)
Q Consensus 135 ~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~ 214 (295)
|||+|+++.+.|.+...+. ...|.++ +.++++++++.+|++++++++++ +||+|+.+.+ +|...++++
T Consensus 70 pGd~Viv~~~t~~~~~~~~--------~~~G~~~--v~vd~d~~~~~~d~~~le~~i~~-~tk~Iip~~~-~G~~~d~~~ 137 (376)
T TIGR02379 70 PGDEVIMPSYTFVSTANAF--------VLRGAKI--VFVDIRPDTMNIDETLIESAITH-RTKAIVPVHY-AGVACDMDT 137 (376)
T ss_pred CcCEEEECCCCcHHHHHHH--------HHcCCEE--EEEecCCCcCCCCHHHHHHhcCc-CceEEEEeCC-CCCccCHHH
Confidence 9999999998777764432 2456555 44456655678999999999987 8999876533 377889999
Q ss_pred HHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCC--CCC-CCCceEEEEEeC
Q 022564 215 IRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTH--KSL-RGPRGAMIFFRK 272 (295)
Q Consensus 215 I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~--K~l-~gp~gG~l~~~~ 272 (295)
|.++|++||++||+|++|+.|....+..... ..|+.++|+| |.+ .|+.||++++++
T Consensus 138 I~~la~~~~i~vIeDaa~~~g~~~~~~~~g~--~~~~~~fSf~~~K~l~~g~~gG~v~~~~ 196 (376)
T TIGR02379 138 IMALANKHQLFVIEDAAQGVMSTYKGRALGS--IGHLGTFSFHETKNYTSGGEGGALLIND 196 (376)
T ss_pred HHHHHHHCCCEEEEECccccCCccCCcccCC--CCCEEEEeCCCCCcCcccCCceEEEECC
Confidence 9999999999999999999887543322111 2477777776 444 466889888874
No 119
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.78 E-value=2e-18 Score=157.49 Aligned_cols=155 Identities=19% Similarity=0.201 Sum_probs=114.8
Q ss_pred HHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeec
Q 022564 96 LCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL 175 (295)
Q Consensus 96 ~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 175 (295)
++++.+++++|.+. .+++++|++++.+++ .++++||+|+++++.|+++...+.. .+...|.++..+ +.
T Consensus 51 ~le~~la~l~g~~~-----~l~~~sG~~al~~~l-~ll~~Gd~Vl~~~~~y~~~~~~~~~----~~~~~G~~v~~v--d~ 118 (378)
T TIGR01329 51 ALESLLAKLDKADR-----AFAFSSGMAALDVIT-RLLNNGDEIIAGDDLYGGTDRLLTQ----VVPRSGVVVVHV--DT 118 (378)
T ss_pred HHHHHHHHHhCCCc-----EEEECCHHHHHHHHH-HHhCCCCEEEEcCCCchHHHHHHHH----HHHHcCcEEEEe--CC
Confidence 45588999999853 688888877766455 4789999999999888766433221 112345444333 22
Q ss_pred CCCCCCCCHHHHHHHHhhcCCcEEEEcCCCC--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEE
Q 022564 176 NESTGYIDYDQLEKSATLFRPKLIVAGASAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVT 253 (295)
Q Consensus 176 ~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~ 253 (295)
.|++++++++++ +||+|+++.++| +...|+++|+++|+++|+++++|++|+.+.....+ .. ++|+++
T Consensus 119 ------~d~~~le~~i~~-~tklv~le~psnptg~v~dl~~I~~la~~~g~~vivD~a~~~~~~~~~l-~~---g~Di~v 187 (378)
T TIGR01329 119 ------TDLDKVKAALGP-KTKLVLLESPTNPLQKIVDIRKISEMAHAQNALVVVDNTMMSPLLCNPL-EL---GADIVY 187 (378)
T ss_pred ------CCHHHHHHhcCc-CceEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcccccCChh-hc---CCcEEE
Confidence 289999999986 899999974444 47889999999999999999999998766443222 12 599999
Q ss_pred eCCCCCCCCCc---eEEEEEeCC
Q 022564 254 TTTHKSLRGPR---GAMIFFRKG 273 (295)
Q Consensus 254 ~s~~K~l~gp~---gG~l~~~~~ 273 (295)
+|+||+++||. +|+++++++
T Consensus 188 ~S~tK~l~G~~~~~~G~v~~~~~ 210 (378)
T TIGR01329 188 HSATKFLAGHSDVMAGVLAVKGE 210 (378)
T ss_pred EecceeccCCccceeEEEEeCcH
Confidence 99999999875 588888664
No 120
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.78 E-value=1e-17 Score=150.91 Aligned_cols=214 Identities=21% Similarity=0.255 Sum_probs=159.2
Q ss_pred cCceecCCCCC---CCHHHHHHHhhhhhccCCCCCCCCc-ccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCCh
Q 022564 47 KGLELIPSENF---TSVSVMQAVGSVMTNKYSEGYPGAR-YYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 122 (295)
Q Consensus 47 ~~i~L~~~~~~---~~~~v~~al~~~l~~~~~~g~~~~~-~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~ 122 (295)
+.+|+..++=. -.|.+++++.+.+.. |..|.++++ ..|......+|| +.+++++|.+. .++++||-
T Consensus 40 ~~~nf~SNdYLGLa~~~~~~~a~~~~~~~-~g~g~~gsR~i~G~~~~h~~LE----~~lA~f~g~e~-----al~f~SGy 109 (388)
T COG0156 40 KVLNFCSNDYLGLASHPELIEAAKAAIRR-YGVGAGGSRLISGTSDLHVELE----EELADFLGAEA-----ALLFSSGF 109 (388)
T ss_pred eeEeeeccCcccccCCHHHHHHHHHHHHH-hCCCCCCcCcccCCcHHHHHHH----HHHHHHhCCCc-----EEEEcccc
Confidence 45777544432 378899999999887 544555555 334433445555 89999999986 79999999
Q ss_pred HHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhc--C---Cc
Q 022564 123 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF--R---PK 197 (295)
Q Consensus 123 ~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~--~---tk 197 (295)
.||..++.++++++|.|+.....|-+... ++++.+.+. +.+. ..|+++||+.+++. . .+
T Consensus 110 ~AN~~~i~~l~~~~dli~~D~lnHASiid--------G~rls~a~~--~~f~------HnD~~~Le~~l~~~~~~~~~~~ 173 (388)
T COG0156 110 VANLGLLSALLKKGDLIFSDELNHASIID--------GIRLSRAEV--RRFK------HNDLDHLEALLEEARENGARRK 173 (388)
T ss_pred hhHHHHHHHhcCCCcEEEEechhhhhHHH--------HHHhCCCcE--EEec------CCCHHHHHHHHHhhhccCCCce
Confidence 99999999999999999988887777544 555666554 3322 25889999999752 1 34
Q ss_pred EEEEc--CCCCCCccCHHHHHHHHHHcCCEEEEEccccccccccC---C-CCCCCC--cceEEEeCCCCCCCCCceEEEE
Q 022564 198 LIVAG--ASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAG---V-IPSPFE--YADVVTTTTHKSLRGPRGAMIF 269 (295)
Q Consensus 198 ~i~l~--~~n~~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~---~-~~~~~~--~~D~~~~s~~K~l~gp~gG~l~ 269 (295)
+|+.. +|+.|.+.|+++|.+++++|++++++|+||+.|.+... . ...++. .+|++++++.|.|+ -.||++.
T Consensus 174 ~IvtegVfSMdGdiApL~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlG-s~Gg~v~ 252 (388)
T COG0156 174 LIVTEGVFSMDGDIAPLPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALG-SSGGYIA 252 (388)
T ss_pred EEEEeccccCCCCcCCHHHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhhc-ccCceee
Confidence 55553 88889999999999999999999999999999988732 1 122222 26899999999985 6889999
Q ss_pred EeCCchhhhcc-CCeeEEE
Q 022564 270 FRKGVKEINKQ-GKEFTCR 287 (295)
Q Consensus 270 ~~~~~~~~~~~-~~~~~~~ 287 (295)
++..+.+.... ++++.|-
T Consensus 253 g~~~~~d~L~~~ar~~ifS 271 (388)
T COG0156 253 GSAALIDYLRNRARPFIFS 271 (388)
T ss_pred CcHHHHHHHHHhCCceecc
Confidence 99998776444 4666654
No 121
>PRK07179 hypothetical protein; Provisional
Probab=99.78 E-value=7.3e-18 Score=155.59 Aligned_cols=193 Identities=14% Similarity=0.184 Sum_probs=134.5
Q ss_pred CHHHHHHHhhhhhccCCCCCC-CCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCC
Q 022564 59 SVSVMQAVGSVMTNKYSEGYP-GARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHD 137 (295)
Q Consensus 59 ~~~v~~al~~~l~~~~~~g~~-~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd 137 (295)
.|++++++.+.+.+ +..+.. ++.+..+.....++ ++.+++++|.+. .+++++|+.|+..++.++..+||
T Consensus 70 ~p~v~~a~~~~~~~-~~~~~~~s~~~~~~~~~~~~l----e~~la~~~g~~~-----~~~~~sG~~An~~~l~~l~~~g~ 139 (407)
T PRK07179 70 HPDIIKAQIAALQE-EGDSLVMSAVFLHDDSPKPQF----EKKLAAFTGFES-----CLLCQSGWAANVGLLQTIADPNT 139 (407)
T ss_pred CHHHHHHHHHHHHH-hCCCCCccccccCCchHHHHH----HHHHHHHhCCCc-----EEEECCHHHHHHHHHHHhCCCCC
Confidence 68999999998876 311111 23333333333444 478999999864 56666665598889999999999
Q ss_pred eEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCC--CCccCHHHH
Q 022564 138 RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY--ARLYDYERI 215 (295)
Q Consensus 138 ~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~--~~~~~l~~I 215 (295)
.|++..+.|.+... ++...|.. .++++ ..|++++++++++.++++|+++++++ |...|+++|
T Consensus 140 ~v~~~~~~h~s~~~--------~~~~~g~~--~~~~~------~~d~~~l~~~l~~~~~~lV~v~~v~n~tG~i~pl~~I 203 (407)
T PRK07179 140 PVYIDFFAHMSLWE--------GVRAAGAQ--AHPFR------HNDVDHLRRQIERHGPGIIVVDSVYSTTGTIAPLADI 203 (407)
T ss_pred EEEEECCcCHHHHH--------HHHHCCCe--EEEec------CCCHHHHHHHHHhcCCeEEEECCCCCCCCccccHHHH
Confidence 99998877766643 22233432 23322 35899999999763578888874444 589999999
Q ss_pred HHHHHHcCCEEEEEccccccccccC----CCCCCCC-cceEEEeCCCCCCCCCceEEEEEeCCchhhh
Q 022564 216 RKVCNKQKAIMLADMAHISGLVAAG----VIPSPFE-YADVVTTTTHKSLRGPRGAMIFFRKGVKEIN 278 (295)
Q Consensus 216 ~~ia~~~~~~vivD~a~~~g~~~~~----~~~~~~~-~~D~~~~s~~K~l~gp~gG~l~~~~~~~~~~ 278 (295)
.++|+++|+++|+|++|+.|..... ....++. .+|++++|+||+++ +++|++++++++.+..
T Consensus 204 ~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~~g-~~~G~l~~~~~~~~~~ 270 (407)
T PRK07179 204 VDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAFA-GRAGIITCPRELAEYV 270 (407)
T ss_pred HHHHHHcCCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHhhh-ccCeEEEeCHHHHHHH
Confidence 9999999999999999987754321 1112221 47999999999985 4689999988775443
No 122
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.78 E-value=1.1e-17 Score=151.49 Aligned_cols=204 Identities=19% Similarity=0.174 Sum_probs=139.3
Q ss_pred cCceecCCCC---CCCHHHHHHHhhhhhccCCCCCCCCc-ccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCCh
Q 022564 47 KGLELIPSEN---FTSVSVMQAVGSVMTNKYSEGYPGAR-YYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 122 (295)
Q Consensus 47 ~~i~L~~~~~---~~~~~v~~al~~~l~~~~~~g~~~~~-~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~ 122 (295)
+.|+|..+++ ..+|++++++.+.+.+ +..++.... .++. ..+...+++.++++++.+. .|++++|+
T Consensus 17 ~~id~~~~~~~g~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~g~----~~~~~~l~~~la~~~~~~~-----~i~~~~G~ 86 (360)
T TIGR00858 17 RLLNFSSNDYLGLASHPEVIQAAQQGAEQ-YGAGSTASRLVSGN----SPLHEELEEELAEWKGTEA-----ALLFSSGY 86 (360)
T ss_pred eEEecccCCcccCCCCHHHHHHHHHHHHh-cCCCCCCcCcccCC----cHHHHHHHHHHHHHhCCCC-----EEEECchH
Confidence 5688888754 2468999999998865 433322211 1222 2334446688888888543 79999998
Q ss_pred HHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhc---CCcEE
Q 022564 123 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF---RPKLI 199 (295)
Q Consensus 123 ~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~---~tk~i 199 (295)
.++..++.+++++||+|++.++.|+++... +...|..+..++ .+|++++++.+++. +++++
T Consensus 87 ~~~~~~l~~~~~~gd~v~~~~~~~~~~~~~--------~~~~g~~~~~~~--------~~d~~~l~~~~~~~~~~~~~~v 150 (360)
T TIGR00858 87 LANVGVISALVGKGDLILSDALNHASLIDG--------CRLSGARVRRYR--------HNDVEHLERLLEKNRGERRKLI 150 (360)
T ss_pred HHHHHHHHHhCCCCCEEEEEccccHHHHHH--------HHhcCCceEEec--------CCCHHHHHHHHHHcccCCCeEE
Confidence 766657788899999999999777666432 234454343222 25899999998752 46777
Q ss_pred EEcCCCC--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCC----CCCC--CcceEEEeCCCCCCCCCceEEEEEe
Q 022564 200 VAGASAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI----PSPF--EYADVVTTTTHKSLRGPRGAMIFFR 271 (295)
Q Consensus 200 ~l~~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~----~~~~--~~~D~~~~s~~K~l~gp~gG~l~~~ 271 (295)
+++.+++ |...++++|.++|+++|+++|+|++|+.|....... ..++ .+.|+++.|++|+|+ +.||+++++
T Consensus 151 ~~~~~~~~~G~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~-~~gG~~~~~ 229 (360)
T TIGR00858 151 VTDGVFSMDGDIAPLPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALG-SYGAYVAGS 229 (360)
T ss_pred EEeCCccCCCCCcCHHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhhh-ccCcEEEcC
Confidence 7664433 467899999999999999999999998775542210 0111 147899999999885 577899988
Q ss_pred CCchhh
Q 022564 272 KGVKEI 277 (295)
Q Consensus 272 ~~~~~~ 277 (295)
+++.+.
T Consensus 230 ~~~~~~ 235 (360)
T TIGR00858 230 QALIDY 235 (360)
T ss_pred HHHHHH
Confidence 776543
No 123
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.78 E-value=3.4e-18 Score=157.05 Aligned_cols=155 Identities=22% Similarity=0.245 Sum_probs=115.0
Q ss_pred HHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeec
Q 022564 96 LCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL 175 (295)
Q Consensus 96 ~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 175 (295)
.+++.++++.|.+. .+++++|+.++.+++.+++++||+|+++.+.|++........ +...| ++++.++
T Consensus 64 ~Le~~lA~l~g~~~-----~v~~~sG~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~~~~~----~~~~g--~~v~~v~- 131 (405)
T PRK08776 64 LLGEALAELEGGAG-----GVITATGMGAINLVLNALLQPGDTLVVPHDAYGGSWRLFNAL----AKKGH--FALITAD- 131 (405)
T ss_pred HHHHHHHHHhCCCc-----eEEEcCHHHHHHHHHHHHhCCCCEEEEccCCchHHHHHHHHH----HHhcC--cEEEEEC-
Confidence 35588888889754 788888877777788899999999999998777643322111 11223 2233322
Q ss_pred CCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCC-cceEE
Q 022564 176 NESTGYIDYDQLEKSATLFRPKLIVAGASAYA--RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE-YADVV 252 (295)
Q Consensus 176 ~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~~--~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~-~~D~~ 252 (295)
..|++++++++++ +||+|+++.++|| ...++++|.++|+++|+++++|++|+.+... .++. ++|++
T Consensus 132 -----~~d~~~l~~~i~~-~tklV~l~~P~NPtG~v~dl~~I~~la~~~gi~vIvD~a~a~~~~~-----~pl~~gaDiv 200 (405)
T PRK08776 132 -----LTDPRSLADALAQ-SPKLVLIETPSNPLLRITDLRFVIEAAHKVGALTVVDNTFLSPALQ-----KPLEFGADLV 200 (405)
T ss_pred -----CCCHHHHHHhcCc-CCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCCcccccC-----CcccccCCEE
Confidence 2488999999976 8999999855554 7889999999999999999999998765432 1222 59999
Q ss_pred EeCCCCCCCCCc---eEEEEEeCC
Q 022564 253 TTTTHKSLRGPR---GAMIFFRKG 273 (295)
Q Consensus 253 ~~s~~K~l~gp~---gG~l~~~~~ 273 (295)
++|++|+|+||. ||+++++++
T Consensus 201 v~S~tK~l~g~~~~~~G~vv~~~~ 224 (405)
T PRK08776 201 LHSTTKYINGHSDVVGGAVVARDA 224 (405)
T ss_pred EecCceeecCCCCceEEEEEeCCH
Confidence 999999999885 577777543
No 124
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.78 E-value=4.4e-18 Score=155.16 Aligned_cols=153 Identities=20% Similarity=0.208 Sum_probs=115.1
Q ss_pred HHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeec
Q 022564 97 CQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL 175 (295)
Q Consensus 97 ~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 175 (295)
+++.++++.|.+ .+++++|++ ++..++.+++++||+|+++.+.|++.+...... ....| ++...+
T Consensus 58 Le~~lA~leg~e------~ivvt~gg~~Ai~~~l~all~~Gd~Il~~~~~y~~~~~~~~~~----~~~~g--i~v~~v-- 123 (388)
T PRK08861 58 LEQTLSELESGK------GAVVTNCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFNTR----ANKGD--FKVQFV-- 123 (388)
T ss_pred HHHHHHHHhCCC------eEEEECCHHHHHHHHHHHHcCCCCEEEEcCCchHHHHHHHHHH----HhcCC--eEEEEE--
Confidence 348888888853 677778877 888788899999999999998887654322111 11123 233332
Q ss_pred CCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCC-cceEE
Q 022564 176 NESTGYIDYDQLEKSATLFRPKLIVAGASAYA--RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE-YADVV 252 (295)
Q Consensus 176 ~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~~--~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~-~~D~~ 252 (295)
+ ..|++++++++++ +|++|+++.++|| ...|+++|.++|+++|+++++|++++.+.... ++. |+|++
T Consensus 124 d----~~d~e~l~~~i~~-~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~vIvDea~~~~~~~~-----pl~~GaDiv 193 (388)
T PRK08861 124 D----QSDAAALDAALAK-KPKLILLETPSNPLVRVVDIAELCQKAKAVGALVAVDNTFLTPVLQK-----PLELGADFV 193 (388)
T ss_pred C----CCCHHHHHHhcCc-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCccccccCC-----CcccCCCEE
Confidence 2 2589999999987 8999999866553 88899999999999999999999988765432 222 59999
Q ss_pred EeCCCCCCCCCc---eEEEEEeCC
Q 022564 253 TTTTHKSLRGPR---GAMIFFRKG 273 (295)
Q Consensus 253 ~~s~~K~l~gp~---gG~l~~~~~ 273 (295)
++|+|||++||. ||+++++++
T Consensus 194 v~S~tK~l~G~~d~~gG~i~~~~~ 217 (388)
T PRK08861 194 IHSTTKYINGHSDVIGGVLITKTK 217 (388)
T ss_pred EeecceeccCCCcceeEEEEecHH
Confidence 999999999986 587777653
No 125
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.78 E-value=4.9e-18 Score=157.03 Aligned_cols=146 Identities=15% Similarity=0.123 Sum_probs=111.7
Q ss_pred HHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecC
Q 022564 97 CQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 176 (295)
Q Consensus 97 ~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 176 (295)
+++.++++.|.++ .+++.||+.|+.+++.+++++||+|+++..+|++........ +...|.++..+ +.+
T Consensus 69 le~~lA~l~g~~~-----av~~sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~~~----l~~~Gi~v~~v--d~~ 137 (433)
T PRK08134 69 LEERVAALEGGVG-----AIATASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLHYT----LRRFGIETTFV--KPG 137 (433)
T ss_pred HHHHHHHHhCCCc-----EEEeCCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHHHH----HhhCCeEEEEE--CCC
Confidence 4488999999876 577778877877788888999999999998888764432211 11235434333 322
Q ss_pred CCCCCCCHHHHHHHHhhcCCcEEEEc-CCCC-CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEe
Q 022564 177 ESTGYIDYDQLEKSATLFRPKLIVAG-ASAY-ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTT 254 (295)
Q Consensus 177 ~~~~~id~e~l~~~i~~~~tk~i~l~-~~n~-~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~ 254 (295)
|++++++++++ +||+|++. .+|+ +.+.|+++|+++|+++|+++++|++|+.+.....+ .. |+|++++
T Consensus 138 ------d~~~l~~~i~~-~TklV~~e~~~np~g~v~Di~~I~~la~~~gi~livD~t~a~~~~~~pl-~~---GaD~vv~ 206 (433)
T PRK08134 138 ------DIDGWRAAIRP-NTRLLFGETLGNPGLEVLDIPTVAAIAHEAGVPLLVDSTFTTPYLLRPF-EH---GADLVYH 206 (433)
T ss_pred ------CHHHHHHhcCC-CCeEEEEECCCcccCcccCHHHHHHHHHHcCCEEEEECCCcccccCCch-hc---CCCEEEe
Confidence 79999999987 99999886 4443 38899999999999999999999999888764322 22 5999999
Q ss_pred CCCCCCCCCc
Q 022564 255 TTHKSLRGPR 264 (295)
Q Consensus 255 s~~K~l~gp~ 264 (295)
|+|||++|+.
T Consensus 207 S~tK~l~g~g 216 (433)
T PRK08134 207 SATKFLGGHG 216 (433)
T ss_pred ccccccCCCC
Confidence 9999998776
No 126
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.78 E-value=4.6e-18 Score=155.62 Aligned_cols=154 Identities=19% Similarity=0.223 Sum_probs=117.0
Q ss_pred HHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecC
Q 022564 97 CQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 176 (295)
Q Consensus 97 ~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 176 (295)
+++.+++++|.+. .+.+++|+.|+.+++.+++++||+|+++.+.|++.+...... ....|..+ ..+ +
T Consensus 66 Le~~lA~~~g~~~-----~i~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~~~~----~~~~gi~~--~~~--d 132 (388)
T PRK07811 66 LEEQLAALEGGAY-----GRAFSSGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLIDKV----FTRWGVEY--TPV--D 132 (388)
T ss_pred HHHHHHHHhCCCc-----eEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHHHh----CcCCCeEE--EEe--C
Confidence 4488999999876 678888877888899999999999999998887654322111 11223322 222 2
Q ss_pred CCCCCCCHHHHHHHHhhcCCcEEEEcCCCC--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCC-cceEEE
Q 022564 177 ESTGYIDYDQLEKSATLFRPKLIVAGASAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE-YADVVT 253 (295)
Q Consensus 177 ~~~~~id~e~l~~~i~~~~tk~i~l~~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~-~~D~~~ 253 (295)
..|++++++++++ +||+|+++.++| +...|+++|.++|+++|+++|+|++++.+.... ++. ++|+++
T Consensus 133 ----~~d~e~l~~~i~~-~tklV~ie~p~NPtg~~~dl~~I~~la~~~gi~lIvD~a~a~~~~~~-----p~~~gaDivv 202 (388)
T PRK07811 133 ----LSDLDAVRAAITP-RTKLIWVETPTNPLLSITDIAALAELAHDAGAKVVVDNTFASPYLQQ-----PLALGADVVV 202 (388)
T ss_pred ----CCCHHHHHHhcCc-CCeEEEEECCCCCcceecCHHHHHHHHHHcCCEEEEECCCCccccCC-----chhhCCcEEE
Confidence 2489999999987 899999975555 378899999999999999999999987764422 222 599999
Q ss_pred eCCCCCCCCCc---eEEEEEeCC
Q 022564 254 TTTHKSLRGPR---GAMIFFRKG 273 (295)
Q Consensus 254 ~s~~K~l~gp~---gG~l~~~~~ 273 (295)
+|++|+++||. ||+++++++
T Consensus 203 ~S~sK~l~g~~~~~gG~vv~~~~ 225 (388)
T PRK07811 203 HSTTKYIGGHSDVVGGALVTNDE 225 (388)
T ss_pred ecCceeecCCCCcEEEEEEECCH
Confidence 99999999884 688888654
No 127
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.77 E-value=1.9e-17 Score=151.24 Aligned_cols=184 Identities=13% Similarity=0.098 Sum_probs=130.0
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhh-cCC
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTAL-LKP 135 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al-~~~ 135 (295)
.+++..+++.+.+...+. ++.. .+.+++++++++++|.+ .+++++|++ ++.+++.++ +++
T Consensus 9 ~~~~~~~~~~~~l~~~~~--------~g~~----~~~~~~e~~la~~~g~~------~~v~~~sgt~al~~~l~~~~~~~ 70 (375)
T PRK11706 9 VVGTELDYIQQAMSSGKL--------CGDG----GFTRRCQQWLEQRFGSA------KVLLTPSCTAALEMAALLLDIQP 70 (375)
T ss_pred CCHHHHHHHHHHHHcCCc--------cCCC----HHHHHHHHHHHHHhCCC------eEEEECCHHHHHHHHHHHhCCCC
Confidence 455667778877765321 1211 23444558888888875 466666666 766566655 799
Q ss_pred CCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHH
Q 022564 136 HDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERI 215 (295)
Q Consensus 136 gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I 215 (295)
||+|+++.+.|.++.. .+...|.++ +.++++++++.+|++++++++++ +||+|+++. ..|...++++|
T Consensus 71 Gd~Viv~~~t~~~~~~--------~~~~~G~~~--v~~d~d~~~~~~d~~~le~~i~~-~tk~i~~~~-~~G~~~~~~~i 138 (375)
T PRK11706 71 GDEVIMPSYTFVSTAN--------AFVLRGAKI--VFVDIRPDTMNIDETLIEAAITP-KTRAIVPVH-YAGVACEMDTI 138 (375)
T ss_pred CCEEEECCCCcHHHHH--------HHHHcCCEE--EEEecCCCcCCcCHHHHHHhcCC-CCeEEEEeC-CCCCccCHHHH
Confidence 9999999977776644 333566555 44456655678999999999987 899998763 24777899999
Q ss_pred HHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCC--CCCCCCceEEEEEeCC
Q 022564 216 RKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTH--KSLRGPRGAMIFFRKG 273 (295)
Q Consensus 216 ~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~--K~l~gp~gG~l~~~~~ 273 (295)
.++|++||++||+|++|+.|....+... + ...|+.++|+| |.++.+.||+++++++
T Consensus 139 ~~la~~~~i~vIeD~a~a~g~~~~~~~~-g-~~~~~~~~Sf~~~K~l~~g~gG~~~~~~~ 196 (375)
T PRK11706 139 MALAKKHNLFVVEDAAQGVMSTYKGRAL-G-TIGHIGCFSFHETKNYTAGEGGALLINDP 196 (375)
T ss_pred HHHHHHcCCEEEEECccccccccCCeee-e-cCcCEEEEeCCCCccccccCCeEEEECCH
Confidence 9999999999999999998874332211 1 12577888877 9997666677777653
No 128
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.77 E-value=1.2e-17 Score=156.50 Aligned_cols=213 Identities=12% Similarity=0.097 Sum_probs=141.0
Q ss_pred cCceecCCCCCCCHHHHHHHhhhhhccC--C-CC---CCCCcccCCcchHHHHHHHHHHHHHHHcC----CCCCCcceeE
Q 022564 47 KGLELIPSENFTSVSVMQAVGSVMTNKY--S-EG---YPGARYYGGNEYIDMAESLCQKRALEAFR----LDPEKWGVNV 116 (295)
Q Consensus 47 ~~i~L~~~~~~~~~~v~~al~~~l~~~~--~-~g---~~~~~~~~~~~~~~~l~~~~~~~la~~~g----~~~~~~~~~v 116 (295)
..|+|..+||..+..+++...+...+.. . .+ ......|+...+..++++++.+++.+.+| ++++ +|
T Consensus 39 g~i~L~~~En~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~v~~~----~I 114 (468)
T PLN02450 39 GIIQMGLAENQLSFDLIESWLAKNPDAAGLKRNGQSIFRELALFQDYHGLPAFKNALAEFMSEIRGNKVTFDPN----KL 114 (468)
T ss_pred eeEEeehhHhHhhHHHHHHHHHhCchhhhcccccccchhhhhcCCCCCChHHHHHHHHHHHHHhhCCCCCcChH----He
Confidence 4699999999765544444433221100 0 00 01112355556778899888899888766 4665 89
Q ss_pred EeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccc-cceeeeEEEeeecC-CCCCCCCHHHHHHHHhh
Q 022564 117 QSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKIS-AVSIFFETMPYRLN-ESTGYIDYDQLEKSATL 193 (295)
Q Consensus 117 ~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~v~~~~~-~~~~~id~e~l~~~i~~ 193 (295)
++|+|++ ++..++.++++|||.|++++|.|+++.. .+. ..|.++ ++++++ .+++.+|++++++++++
T Consensus 115 iit~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~~--------~~~~~~g~~~--v~v~~~~~~~~~~~~~~le~~~~~ 184 (468)
T PLN02450 115 VLTAGATSANETLMFCLAEPGDAFLLPTPYYPGFDR--------DLKWRTGVEI--VPIHCSSSNGFQITESALEEAYQQ 184 (468)
T ss_pred EEccChHHHHHHHHHHhCCCCCEEEECCCCCCchHH--------HHhhcCCcEE--EEEecCCccCCcCCHHHHHHHHHH
Confidence 9999999 8887888999999999999966655532 222 245444 444454 24668899999998864
Q ss_pred -----cCCcEEEEcCCCCC--C---ccCHHHHHHHHHHcCCEEEEEccccccccccCCCCC--------CC-----Ccce
Q 022564 194 -----FRPKLIVAGASAYA--R---LYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPS--------PF-----EYAD 250 (295)
Q Consensus 194 -----~~tk~i~l~~~n~~--~---~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~--------~~-----~~~D 250 (295)
.++|+|++++|||| . ...+++|.++|++|+++||+|++++.-......... .. ...-
T Consensus 185 ~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~v 264 (468)
T PLN02450 185 AQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRV 264 (468)
T ss_pred HHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCCCCcccHHHHhhhcccccCCCCCcE
Confidence 27899999866664 3 335678889999999999999997632221110000 00 0123
Q ss_pred EEEeCCCCCC--CCCceEEEEEeCC
Q 022564 251 VVTTTTHKSL--RGPRGAMIFFRKG 273 (295)
Q Consensus 251 ~~~~s~~K~l--~gp~gG~l~~~~~ 273 (295)
+++.|++|.| +|.+-|++++.++
T Consensus 265 i~l~S~SK~~~l~GlRiG~li~~~~ 289 (468)
T PLN02450 265 HIVYSLSKDLGLPGFRVGAIYSNDE 289 (468)
T ss_pred EEEEeccccCCCCCccEEEEEECCH
Confidence 7799999987 4566699999765
No 129
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.77 E-value=4e-18 Score=156.48 Aligned_cols=157 Identities=17% Similarity=0.150 Sum_probs=117.3
Q ss_pred HHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecC
Q 022564 97 CQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 176 (295)
Q Consensus 97 ~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 176 (295)
+++.+++++|+++ .+++.+|++++..++.+++++||+|+++.+.|+++...... .....|.++ ..+ +
T Consensus 70 Le~~lA~l~G~~~-----~~~~~sG~~Ai~~~l~~~l~~Gd~Vl~~~~~y~~~~~~~~~----~~~~~G~~v--~~v--d 136 (398)
T PRK07504 70 FEKRMCALEGAED-----ARATASGMAAVTAAILCQVKAGDHVVAARALFGSCRYVVET----LLPRYGIES--TLV--D 136 (398)
T ss_pred HHHHHHHHhCCCe-----eeEecCHHHHHHHHHHHHhCCCCEEEEcCCchhHHHHHHHH----HHhhcCeEE--EEE--C
Confidence 4488999999987 45677888877767788899999999999877776432211 111234333 322 2
Q ss_pred CCCCCCCHHHHHHHHhhcCCcEEEEcCCCC--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEe
Q 022564 177 ESTGYIDYDQLEKSATLFRPKLIVAGASAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTT 254 (295)
Q Consensus 177 ~~~~~id~e~l~~~i~~~~tk~i~l~~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~ 254 (295)
.+|++++++++++ +||+|+++.++| +...|+++|.++|+++|+++++|++|+.+...... .. ++|++++
T Consensus 137 ----~~d~e~l~~ai~~-~tklV~lesp~NptG~v~dl~~I~~la~~~gi~lvvD~a~a~~~~~~~~-~~---gaDivv~ 207 (398)
T PRK07504 137 ----GLDLDNWEKAVRP-NTKVFFLESPTNPTLEVIDIAAVAKIANQAGAKLVVDNVFATPLFQKPL-EL---GAHIVVY 207 (398)
T ss_pred ----CCCHHHHHHhcCc-CceEEEEECCCCCCcEecCHHHHHHHHHHcCCEEEEECCccccccCCch-hh---CCCEEEe
Confidence 3689999999987 899999986666 47889999999999999999999998876543211 11 5999999
Q ss_pred CCCCCCCCCc---eEEEEEeCCch
Q 022564 255 TTHKSLRGPR---GAMIFFRKGVK 275 (295)
Q Consensus 255 s~~K~l~gp~---gG~l~~~~~~~ 275 (295)
|+||+++|+. ||+++++++..
T Consensus 208 S~sK~l~g~g~~~GG~vv~~~~~i 231 (398)
T PRK07504 208 SATKHIDGQGRCLGGVVLSDKAWI 231 (398)
T ss_pred eccccccCCccceEEEEEeCcHHH
Confidence 9999998754 57888877644
No 130
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.77 E-value=1.1e-17 Score=153.95 Aligned_cols=204 Identities=18% Similarity=0.190 Sum_probs=135.7
Q ss_pred cCceecCCCCC---CCH----HHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeC
Q 022564 47 KGLELIPSENF---TSV----SVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSL 119 (295)
Q Consensus 47 ~~i~L~~~~~~---~~~----~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~ 119 (295)
+.++|..++.+ .++ .+.+++..++.. | ...|++..+..+++ +.+++++|.+ .++++
T Consensus 12 n~~~l~~~~v~iDlltds~t~ams~~~~~a~~~----g---d~~Y~~~~g~~~Le----eaia~~~g~~------~vv~t 74 (431)
T cd00617 12 NVFLLRSEDVYIDLLTDSGTGAMSDYQWAAMML----G---DEAYAGSKSFYDLE----DAVQDLFGFK------HIIPT 74 (431)
T ss_pred CEEeCCCCCcCCCCCCCCCcHHHHHHHHHHHHh----C---CCccCCCCCHHHHH----HHHHHHHCCC------eEEEc
Confidence 56777777763 222 455555555443 1 11256667777777 6677777875 46666
Q ss_pred CChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCC-------CCCCCCHHHHHHHH
Q 022564 120 SGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE-------STGYIDYDQLEKSA 191 (295)
Q Consensus 120 sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-------~~~~id~e~l~~~i 191 (295)
+|++ |+..++.++++|||.| ++.+.+. .+...+...|.....++++... -.+.+|+++|++++
T Consensus 75 ~~Gt~Al~la~~al~~pGD~V-~~~~~f~--------~~~~~i~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I 145 (431)
T cd00617 75 HQGRGAENILFSILLKPGRTV-PSNMHFD--------TTRGHIEANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLI 145 (431)
T ss_pred CCHHHHHHHHHHHhCCCCCEE-ccCCccc--------chHHHHHhCCCEeEEEecccccccccccCCCCCcCHHHHHHHh
Confidence 6666 8887889999999987 4553232 2222445677665555432111 12459999999999
Q ss_pred hhc---CCcEEEEcCCCC---CCc---cCHHHHHHHHHHcCCEEEEEcccccccccc------CCCCCC--------CCc
Q 022564 192 TLF---RPKLIVAGASAY---ARL---YDYERIRKVCNKQKAIMLADMAHISGLVAA------GVIPSP--------FEY 248 (295)
Q Consensus 192 ~~~---~tk~i~l~~~n~---~~~---~~l~~I~~ia~~~~~~vivD~a~~~g~~~~------~~~~~~--------~~~ 248 (295)
++. ++++|+++.||| |.. .++++|.++|++||++||.|+||..+.... +....+ +..
T Consensus 146 ~~~~~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~ei~~e~~s~ 225 (431)
T cd00617 146 DEVGAENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIAEIAREMFSY 225 (431)
T ss_pred CcccCCCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHHHHHHHhhcc
Confidence 862 378888875555 333 356788999999999999999988653221 222211 125
Q ss_pred ceEEEeCCCCCCCCCceEEEEEeCC-chh
Q 022564 249 ADVVTTTTHKSLRGPRGAMIFFRKG-VKE 276 (295)
Q Consensus 249 ~D~~~~s~~K~l~gp~gG~l~~~~~-~~~ 276 (295)
+|.+++|++|.+.+|.||+++++++ +.+
T Consensus 226 sd~~~mS~~K~~~~~~GG~i~~~d~~l~~ 254 (431)
T cd00617 226 ADGCTMSAKKDGLVNIGGFLALRDDELYE 254 (431)
T ss_pred CCEEEEEeecCCCCccceEEEeCcHHHHH
Confidence 9999999999999999999999985 544
No 131
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.77 E-value=8.2e-18 Score=151.59 Aligned_cols=185 Identities=21% Similarity=0.221 Sum_probs=130.3
Q ss_pred CHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhhcCCCC
Q 022564 59 SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHD 137 (295)
Q Consensus 59 ~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al~~~gd 137 (295)
.|.++++..+.+.. | + + ...+.+++++.+++++|++++ ++++++|++ ++..++.+++++||
T Consensus 35 ~~~~~~~~~~~~~~-~--~--------g---~~~~~~~Le~~lA~~~g~~~e----~ilv~~gg~~a~~~~~~al~~~gd 96 (346)
T TIGR03576 35 GFKIDEEDLELLET-Y--V--------G---PAIFEEKVQELGREHLGGPEE----KILVFNRTSSAILATILALEPPGR 96 (346)
T ss_pred ChhHHHHHHHHHHH-h--c--------C---CHHHHHHHHHHHHHHcCCCcc----eEEEECCHHHHHHHHHHHhCCCCC
Confidence 67888888887766 3 1 1 125566677999999999776 788888888 99989999999999
Q ss_pred eEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCC-CCc---cCHH
Q 022564 138 RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY-ARL---YDYE 213 (295)
Q Consensus 138 ~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~-~~~---~~l~ 213 (295)
+|+++.++.+.|.+ +..++.+.|.++ +. . .|+++++. . + ++++|+++.+++ |.+ .+++
T Consensus 97 ~Vli~~~d~p~~~s-----~~~~~~l~ga~~--~~--~------~~l~~l~~-~-~-~~~lIiitg~s~~G~v~~~~~L~ 158 (346)
T TIGR03576 97 KVVHYLPEKPAHPS-----IPRSCKLAGAEY--FE--S------DELSELKK-I-D-GTSLVVITGSTMDLKVVSEEDLK 158 (346)
T ss_pred EEEECCCCCCCchh-----HHHHHHHcCCEE--ec--c------CCHHHHhh-C-c-CceEEEEECCCCCCcccCHHHHH
Confidence 99986544444422 222455666432 21 1 24555432 2 3 688888874443 444 6899
Q ss_pred HHHHHHHHcCCEEEEEcccccccccc-CCCCCCCCcceEEEeCCCCCCCCCceEEEEEeCCchhhhc
Q 022564 214 RIRKVCNKQKAIMLADMAHISGLVAA-GVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINK 279 (295)
Q Consensus 214 ~I~~ia~~~~~~vivD~a~~~g~~~~-~~~~~~~~~~D~~~~s~~K~l~gp~gG~l~~~~~~~~~~~ 279 (295)
+|+++|++||+++++|+||+.|.... +.....-.++|++++|++|+++|+++|++++++++.+...
T Consensus 159 ~i~~la~~~~~~livDEAy~~~~~~~~~~~~~~~~~~divv~s~SKalaG~r~G~v~~~~~li~~l~ 225 (346)
T TIGR03576 159 RVIKQAKSKEAIVLVDDASGARVRRLYGQPPALDLGADLVVTSTDKLMDGPRGGLLAGRKELVDKIK 225 (346)
T ss_pred HHHHHHHHcCCEEEEECCccccccccCCCCCHHHcCCcEEEeccchhccccceEEEEeCHHHHHHHH
Confidence 99999999999999999998875431 1111000147899999999999999999999998766443
No 132
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.77 E-value=7.3e-18 Score=154.05 Aligned_cols=161 Identities=16% Similarity=0.118 Sum_probs=117.4
Q ss_pred chHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceee
Q 022564 88 EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIF 167 (295)
Q Consensus 88 ~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~ 167 (295)
+...++| +.+++++|.+. .+++++|+.|+..++.+++++||+|+++.+.|+++....... ...|.+
T Consensus 53 p~~~~lE----~~lA~l~g~~~-----~l~~~sG~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~~~~~~-----~~~g~~ 118 (385)
T PRK08574 53 PTLRPLE----EALAKLEGGVD-----ALAFNSGMAAISTLFFSLLKAGDRVVLPMEAYGTTLRLLKSL-----EKFGVK 118 (385)
T ss_pred ccHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHh-----hccCcE
Confidence 3445555 88899999764 677777777888788899999999999998888775433211 123322
Q ss_pred eEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCC
Q 022564 168 FETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYA--RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP 245 (295)
Q Consensus 168 ~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~~--~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~ 245 (295)
+..+ .+|++++++++++.+||+|+++.++|| ...|+++|+++|+++|+++++|++|+.+.....+ ..
T Consensus 119 v~~~---------~~d~~~l~~~i~~~~tklV~ie~p~NPtG~v~dl~~I~~la~~~gi~livD~t~a~~~~~~~l-~~- 187 (385)
T PRK08574 119 VVLA---------YPSTEDIIEAIKEGRTKLVFIETMTNPTLKVIDVPEVAKAAKELGAILVVDNTFATPLLYRPL-RH- 187 (385)
T ss_pred EEEE---------CCCHHHHHHhcCccCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccCChh-hh-
Confidence 2211 246899999987547999998755553 7889999999999999999999999877543322 12
Q ss_pred CCcceEEEeCCCCCCCCCc---eEEEEEe-CCch
Q 022564 246 FEYADVVTTTTHKSLRGPR---GAMIFFR-KGVK 275 (295)
Q Consensus 246 ~~~~D~~~~s~~K~l~gp~---gG~l~~~-~~~~ 275 (295)
|+|++++|++|+++||. ||+++++ +++.
T Consensus 188 --GaDivv~S~sK~l~g~~d~~gG~vi~~~~~~~ 219 (385)
T PRK08574 188 --GADFVVHSLTKYIAGHNDVVGGVAVAWSGEFL 219 (385)
T ss_pred --CCcEEEeeCceeecCCCCceeEEEEECcHHHH
Confidence 59999999999999874 5755554 4443
No 133
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.77 E-value=5.8e-18 Score=155.51 Aligned_cols=157 Identities=18% Similarity=0.192 Sum_probs=118.9
Q ss_pred HHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecC
Q 022564 97 CQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 176 (295)
Q Consensus 97 ~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 176 (295)
+++.++++.|.+. .+++.+|++++..++.+++++||+|+++...|++.+.... ..+...|..+..+ +
T Consensus 75 le~~lA~l~g~~~-----al~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~~~----~~~~~~G~~v~~v--d-- 141 (403)
T PRK07810 75 FEERLRLIEGAEA-----CFATASGMSAVFTALGALLGAGDRLVAARSLFGSCFVVCN----EILPRWGVETVFV--D-- 141 (403)
T ss_pred HHHHHHHHhCCCc-----EEEECChHHHHHHHHHHHhCCCCEEEEccCCcchHHHHHH----HHHHHcCcEEEEE--C--
Confidence 4488899999774 7899999998887888999999999999876665543221 1222345444333 2
Q ss_pred CCCCCCCHHHHHHHHhhcCCcEEEEcCCCC--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEe
Q 022564 177 ESTGYIDYDQLEKSATLFRPKLIVAGASAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTT 254 (295)
Q Consensus 177 ~~~~~id~e~l~~~i~~~~tk~i~l~~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~ 254 (295)
..|++++++++++ +|++|+++.++| +...|+++|.++|+++|+++++|++++.+.....+ .. ++|++++
T Consensus 142 ----~~d~~~l~~ai~~-~tklV~~esp~Nptg~v~dl~~I~~la~~~g~~vivD~a~a~~~~~~~~-~~---gaDivv~ 212 (403)
T PRK07810 142 ----GEDLSQWEEALSV-PTQAVFFETPSNPMQSLVDIAAVSELAHAAGAKVVLDNVFATPLLQRGL-PL---GADVVVY 212 (403)
T ss_pred ----CCCHHHHHHhcCc-CceEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCCccccCChh-hc---CCcEEEc
Confidence 1389999999987 899999975554 47889999999999999999999998876553322 12 5999999
Q ss_pred CCCCCCCCCc---eEEEEEeCCch
Q 022564 255 TTHKSLRGPR---GAMIFFRKGVK 275 (295)
Q Consensus 255 s~~K~l~gp~---gG~l~~~~~~~ 275 (295)
|++|+++|+. ||+++++++..
T Consensus 213 S~tK~l~g~g~~~gG~v~~~~~~~ 236 (403)
T PRK07810 213 SGTKHIDGQGRVLGGAILGDREYI 236 (403)
T ss_pred cCCceecCCcCceeEEEEeChHHH
Confidence 9999998755 68888887643
No 134
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.77 E-value=3.8e-18 Score=154.05 Aligned_cols=201 Identities=16% Similarity=0.165 Sum_probs=140.1
Q ss_pred cCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-
Q 022564 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP- 123 (295)
Q Consensus 47 ~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~- 123 (295)
+.|+|..++++ ++|++++++.+++.... .|+ .... .+ +++.++++++++++ +|++++|++
T Consensus 20 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~--~y~------~~~~-~~----lr~~ia~~~~~~~~----~i~~~~G~~~ 82 (346)
T TIGR01141 20 EVIKLNSNENPFGPPPKAKEALRAEADKLH--RYP------DPDP-AE----LKQALADYYGVDPE----QILLGNGSDE 82 (346)
T ss_pred ceEEccCCCCCCCCCHHHHHHHHHhHHHhh--cCC------CCCH-HH----HHHHHHHHhCcChH----HEEEcCCHHH
Confidence 46889877763 68899999998764311 222 2122 33 55888888998876 899999999
Q ss_pred HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcC
Q 022564 124 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGA 203 (295)
Q Consensus 124 a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~ 203 (295)
++..++.+++++||+|+++++.|+.+ ...+...|.++..+ +++ +++.+|++++++.+++ ++++|+++.
T Consensus 83 ~l~~~~~~l~~~gd~v~~~~p~y~~~--------~~~~~~~g~~~~~~--~~~-~~~~~d~~~l~~~~~~-~~~~v~l~~ 150 (346)
T TIGR01141 83 IIELLIRAFLEPGDAVLVPPPTYSMY--------EISAKIHGAEVVKV--PLD-EDGQLDLEDILVAIDD-KPKLVFLCS 150 (346)
T ss_pred HHHHHHHHhcCCCCEEEEcCCCHHHH--------HHHHHHcCCeEEEe--ccC-CCCCCCHHHHHHhcCC-CCCEEEEeC
Confidence 77668888899999999999655433 22233556555444 455 3478999999998866 899999985
Q ss_pred CCC--CCccCHHHHHHHHHHc--CCEEEEEccccccccccCCCCCC-C--CcceEEEeCCCCCCC--CCceEEEEEeCCc
Q 022564 204 SAY--ARLYDYERIRKVCNKQ--KAIMLADMAHISGLVAAGVIPSP-F--EYADVVTTTTHKSLR--GPRGAMIFFRKGV 274 (295)
Q Consensus 204 ~n~--~~~~~l~~I~~ia~~~--~~~vivD~a~~~g~~~~~~~~~~-~--~~~D~~~~s~~K~l~--gp~gG~l~~~~~~ 274 (295)
++| |...+++++.++|+.+ ++++++|++|.. ....+ .... + ...++++.|++|+|+ |++.|++++++++
T Consensus 151 p~NptG~~~~~~~~~~l~~~~~~~~~ii~D~~y~~-~~~~~-~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~ 228 (346)
T TIGR01141 151 PNNPTGNLLSRSDIEAVLERTPEDALVVVDEAYGE-FSGEP-STLPLLAEYPNLIVLRTLSKAFGLAGLRIGYAIANAEI 228 (346)
T ss_pred CCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhh-hcCCc-cHHHHHhhCCCEEEEehhhHhhhchhhhceeeecCHHH
Confidence 555 4788999999999887 999999999762 21111 0000 0 014577899999984 3344999998876
Q ss_pred hhhh
Q 022564 275 KEIN 278 (295)
Q Consensus 275 ~~~~ 278 (295)
.+..
T Consensus 229 ~~~~ 232 (346)
T TIGR01141 229 IDAL 232 (346)
T ss_pred HHHH
Confidence 5543
No 135
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.77 E-value=2.3e-17 Score=151.99 Aligned_cols=205 Identities=16% Similarity=0.069 Sum_probs=138.3
Q ss_pred cCceecCCCC------CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcC-CCCCCcceeEEeC
Q 022564 47 KGLELIPSEN------FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR-LDPEKWGVNVQSL 119 (295)
Q Consensus 47 ~~i~L~~~~~------~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g-~~~~~~~~~v~~~ 119 (295)
+.++|..|++ ++++.+.+++.+.+......+ |+...+..++++++.+++.+..+ ++++ +|++|
T Consensus 32 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~------Y~~~~g~~~lr~aia~~~~~~~~~~~~~----~i~~t 101 (401)
T TIGR01264 32 PMIKLSIGDPTVFGNLPTDPEVMQAMKDSLDSGKYNG------YAPTVGALSAREAIASYYHNPDGPIEAD----DVVLC 101 (401)
T ss_pred CeeecCCCCCCCcCCCCCCHHHHHHHHHHHhccCCCC------CCCCCCCHHHHHHHHHHHhhcCCCCCHH----HEEEC
Confidence 5588987765 368889999888765421111 33445556777666666654211 4555 79999
Q ss_pred CChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcE
Q 022564 120 SGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKL 198 (295)
Q Consensus 120 sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~ 198 (295)
+|++ ++..++.+++++||+|++++|.|..+ ...+...|.++..++++.+ +++.+|++++++.+++ ++++
T Consensus 102 ~G~~~al~~~~~~l~~~gd~v~i~~P~y~~~--------~~~~~~~g~~v~~~~~~~~-~~~~~d~~~l~~~~~~-~~~~ 171 (401)
T TIGR01264 102 SGCSHAIEMCIAALANAGQNILVPRPGFPLY--------ETLAESMGIEVKLYNLLPD-KSWEIDLKQLESLIDE-KTAA 171 (401)
T ss_pred cChHHHHHHHHHHhCCCCCEEEEeCCCChhH--------HHHHHHcCCEEEEeecCCc-cCCCCCHHHHHHHhcc-CceE
Confidence 9999 87778889999999999999554433 3344456655544443222 3578999999998876 7899
Q ss_pred EEEcCCCCC--Cc---cCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCC---Cc--ceEEEeCCCCCCCC--CceE
Q 022564 199 IVAGASAYA--RL---YDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPF---EY--ADVVTTTTHKSLRG--PRGA 266 (295)
Q Consensus 199 i~l~~~n~~--~~---~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~---~~--~D~~~~s~~K~l~g--p~gG 266 (295)
++++.+||| .. .++++|+++|+++|++||+|+++..-... +....++ .. .-+++.|++|.|+. .+-|
T Consensus 172 v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~-~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG 250 (401)
T TIGR01264 172 LIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFS-GATFEPLASLSSTVPILSCGGLAKRWLVPGWRLG 250 (401)
T ss_pred EEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccC-CcccccHHHcCCCCcEEEEccCcccCCCccceEE
Confidence 988866664 33 35889999999999999999996532221 1111111 11 13679999997644 4449
Q ss_pred EEEEeC
Q 022564 267 MIFFRK 272 (295)
Q Consensus 267 ~l~~~~ 272 (295)
++++.+
T Consensus 251 ~iv~~~ 256 (401)
T TIGR01264 251 WIIIHD 256 (401)
T ss_pred EEEecC
Confidence 999874
No 136
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.77 E-value=1.8e-17 Score=151.58 Aligned_cols=206 Identities=20% Similarity=0.215 Sum_probs=137.9
Q ss_pred HcCceecCCCC--C-CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCCh
Q 022564 46 WKGLELIPSEN--F-TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 122 (295)
Q Consensus 46 ~~~i~L~~~~~--~-~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~ 122 (295)
++.|+|..+++ + ++|.+++++.+.+.. +..+.+.. ....+...+.+.+++.++++++.+ + .+++++|+
T Consensus 39 ~~~id~~~~~~~g~~~~~~v~~a~~~~~~~-~~~~~~~~---~~~~g~~~~~~~l~~~la~~~~~~-~----~i~~~~g~ 109 (385)
T PRK05958 39 RRMLNFASNDYLGLARHPRLIAAAQQAARR-YGAGSGGS---RLVTGNSPAHEALEEELAEWFGAE-R----ALLFSSGY 109 (385)
T ss_pred ceEEEeeCCCcccCCCCHHHHHHHHHHHHh-cCCCCCCc---CcccCCcHHHHHHHHHHHHHhCCC-c----EEEECcHH
Confidence 45688887764 3 578999999998865 42222221 111122344556778899999853 2 78888887
Q ss_pred HHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhc--CCcEEE
Q 022564 123 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF--RPKLIV 200 (295)
Q Consensus 123 ~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~--~tk~i~ 200 (295)
.++..++.+++++||+|++.++.|+++... +...|..+..++ ..|++++++.+++. ++++++
T Consensus 110 ~~~~~~l~~~~~~gd~V~~~~~~~~~~~~~--------~~~~g~~~~~~~--------~~d~~~l~~~i~~~~~~~~lvi 173 (385)
T PRK05958 110 AANLAVLTALAGKGDLIVSDKLNHASLIDG--------ARLSRARVRRYP--------HNDVDALEALLAKWRAGRALIV 173 (385)
T ss_pred HHHHHHHHHhCCCCCEEEEeCccCHHHHHH--------HHhcCCceEEeC--------CCCHHHHHHHHHhccCCCeEEE
Confidence 766667788899999999999887776532 224454443332 23889999998752 244454
Q ss_pred EcCCCC--CCccCHHHHHHHHHHcCCEEEEEcccccccccc-CC--CC-CCCC--cceEEEeCCCCCCCCCceEEEEEeC
Q 022564 201 AGASAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAA-GV--IP-SPFE--YADVVTTTTHKSLRGPRGAMIFFRK 272 (295)
Q Consensus 201 l~~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~-~~--~~-~~~~--~~D~~~~s~~K~l~gp~gG~l~~~~ 272 (295)
++..++ |...++++|.++|++||+++|+|++|+.|.... +. .. ..+. ..++++.|++|+| |+.||+++.++
T Consensus 174 ~~~~~~~~G~~~~l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~-~~~Gg~~~~~~ 252 (385)
T PRK05958 174 TESVFSMDGDLAPLAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKAL-GSSGAAVLGSE 252 (385)
T ss_pred EEecccCCCCcCCHHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEechhhc-ccCCcEEEcCH
Confidence 443333 568899999999999999999999998765531 11 00 0111 2458899999998 55678888887
Q ss_pred Cchhh
Q 022564 273 GVKEI 277 (295)
Q Consensus 273 ~~~~~ 277 (295)
++.+.
T Consensus 253 ~~~~~ 257 (385)
T PRK05958 253 TLIDY 257 (385)
T ss_pred HHHHH
Confidence 76543
No 137
>PLN02483 serine palmitoyltransferase
Probab=99.77 E-value=8.3e-18 Score=158.08 Aligned_cols=193 Identities=22% Similarity=0.156 Sum_probs=129.0
Q ss_pred HHHHHHHhhhhhccCCCCCCCCc-ccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCe
Q 022564 60 VSVMQAVGSVMTNKYSEGYPGAR-YYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDR 138 (295)
Q Consensus 60 ~~v~~al~~~l~~~~~~g~~~~~-~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~ 138 (295)
+...+++.+++.+ |..+..+++ .|+......+ +++.+++++|.+. .|++++|..++.+++.+++++||+
T Consensus 118 ~~~~~~~~~ai~~-~g~~~~~sr~~~g~~~~~~e----le~~lA~~~g~~~-----ai~~~~G~~an~~~i~al~~~Gd~ 187 (489)
T PLN02483 118 EYCTPRVIESLKK-YSASTCSSRVDGGTTKLHRE----LEELVARFVGKPA-----AIVFGMGYATNSTIIPALIGKGGL 187 (489)
T ss_pred HHHHHHHHHHHHH-hCCCCCccccccCCcHHHHH----HHHHHHHHhCCCc-----EEEECCHHHHHHHHHHHhCCCCCE
Confidence 3344444444444 322333332 2444444444 4488899999654 799999988877788899999999
Q ss_pred EEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhh------cCC-----cEEEEc---CC
Q 022564 139 IMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL------FRP-----KLIVAG---AS 204 (295)
Q Consensus 139 Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~------~~t-----k~i~l~---~~ 204 (295)
|++.++.|.+... ++...|+++..++ .+ |.+++++.+++ +++ ++++++ .+
T Consensus 188 Vi~d~~~h~s~~~--------~~~~~Ga~v~~~~--~~------d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~s 251 (489)
T PLN02483 188 IISDSLNHNSIVN--------GARGSGATIRVFQ--HN------TPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIYS 251 (489)
T ss_pred EEEcchhhHHHHH--------HHHHcCCeEEEEe--CC------CHHHHHHHHHhhhhccccccccCCceEEEEECCCCC
Confidence 9999988888654 3446676554443 22 55666665542 122 555554 23
Q ss_pred CCCCccCHHHHHHHHHHcCCEEEEEccccccccccC---C-CCCCC--CcceEEEeCCCCCCCCCceEEEEEeCCchhhh
Q 022564 205 AYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAG---V-IPSPF--EYADVVTTTTHKSLRGPRGAMIFFRKGVKEIN 278 (295)
Q Consensus 205 n~~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~---~-~~~~~--~~~D~~~~s~~K~l~gp~gG~l~~~~~~~~~~ 278 (295)
..|...++++|.++|++||+++++|++|+.|..... . ...++ .++|++++|++|+| |+.||++++++++.+..
T Consensus 252 ~~G~~~~l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~-g~~GG~i~~~~~li~~l 330 (489)
T PLN02483 252 MEGELCKLPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSF-GSCGGYIAGSKELIQYL 330 (489)
T ss_pred CCCcccCHHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCCCcccCcEEEEecchhc-ccCceEEEcCHHHHHHH
Confidence 336788999999999999999999999987654311 0 00111 24899999999998 55789999988876654
Q ss_pred c
Q 022564 279 K 279 (295)
Q Consensus 279 ~ 279 (295)
+
T Consensus 331 ~ 331 (489)
T PLN02483 331 K 331 (489)
T ss_pred H
Confidence 4
No 138
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.77 E-value=6.6e-18 Score=154.68 Aligned_cols=158 Identities=15% Similarity=0.161 Sum_probs=119.1
Q ss_pred HHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecC
Q 022564 97 CQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 176 (295)
Q Consensus 97 ~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 176 (295)
+++.+++++|.+. .+++++|+.++..++.+++++||+|+++.+.|++.+.... ..+...|..+..+ +.+
T Consensus 64 le~~lA~l~g~~~-----av~~~sG~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~~----~~~~~~G~~~~~v--d~~ 132 (391)
T TIGR01328 64 LEGRIAFLEGTEA-----AVATSSGMGAIAATLLTILKAGDHLISDECLYGCTFALLE----HALTKFGIQVDFI--NMA 132 (391)
T ss_pred HHHHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEecCcchHHHHHHH----HHHhcCCeEEEEE--CCC
Confidence 3488999999876 6888888888887888899999999999987766543221 1122345444333 222
Q ss_pred CCCCCCCHHHHHHHHhhcCCcEEEEcCCCC--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEe
Q 022564 177 ESTGYIDYDQLEKSATLFRPKLIVAGASAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTT 254 (295)
Q Consensus 177 ~~~~~id~e~l~~~i~~~~tk~i~l~~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~ 254 (295)
|++++++++++ +|++|+++.++| +...|+++|.++|+++|+++++|++++.+...... . .++|++++
T Consensus 133 ------d~e~l~~~i~~-~tklV~le~p~Np~G~v~dl~~I~~la~~~gi~livD~a~a~~~~~~~~-~---~g~Divv~ 201 (391)
T TIGR01328 133 ------IPEEVKAHIKD-NTKIVYFETPANPTMKLIDMERVCRDAHSQGVKVIVDNTFATPMLTNPV-A---LGVDVVVH 201 (391)
T ss_pred ------CHHHHHHhhcc-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCchhccCCch-h---cCCCEEEc
Confidence 79999999987 899999975555 37889999999999999999999998876542211 1 15999999
Q ss_pred CCCCCCCCCc---eEEEEEeCCchh
Q 022564 255 TTHKSLRGPR---GAMIFFRKGVKE 276 (295)
Q Consensus 255 s~~K~l~gp~---gG~l~~~~~~~~ 276 (295)
|++|+++|+. ||+++.++++.+
T Consensus 202 S~sK~lgg~g~~~gG~v~~~~~li~ 226 (391)
T TIGR01328 202 SATKYIGGHGDVVAGLICGKAELLQ 226 (391)
T ss_pred cccccccCCCCceEEEEEcCHHHHH
Confidence 9999998765 688888877544
No 139
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.77 E-value=6.4e-18 Score=154.78 Aligned_cols=153 Identities=15% Similarity=0.164 Sum_probs=116.6
Q ss_pred HHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecC
Q 022564 97 CQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 176 (295)
Q Consensus 97 ~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 176 (295)
+++.+++++|.+. .+++++|+.++.+++. ++++||+|+++++.|++.+..+.. .+...|.++..++ .
T Consensus 59 le~~lA~l~g~~~-----~v~~~sG~~ai~~~l~-~l~~Gd~Vlv~~~~y~~~~~~~~~----~~~~~G~~v~~v~--~- 125 (390)
T PRK08064 59 LEDIIAELEGGTK-----GFAFASGMAAISTAFL-LLSKGDHVLISEDVYGGTYRMITE----VLSRFGIEHTFVD--M- 125 (390)
T ss_pred HHHHHHHHhCCCC-----eEEECCHHHHHHHHHH-HhCCCCEEEEccCccchHHHHHHH----HHHHcCCEEEEEC--C-
Confidence 5589999999875 7889999887775664 789999999999988876543321 1223454444443 2
Q ss_pred CCCCCCCHHHHHHHHhhcCCcEEEEcCCCC--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEe
Q 022564 177 ESTGYIDYDQLEKSATLFRPKLIVAGASAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTT 254 (295)
Q Consensus 177 ~~~~~id~e~l~~~i~~~~tk~i~l~~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~ 254 (295)
.|++++++++++ +|++|+++.++| |...|+++|.++|+++|+++++|++++.+...... .. ++|+++.
T Consensus 126 -----~d~~~l~~~l~~-~tklV~l~~p~NptG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~~~~-~~---g~Divv~ 195 (390)
T PRK08064 126 -----TNLEEVAQNIKP-NTKLFYVETPSNPLLKVTDIRGVVKLAKAIGCLTFVDNTFLTPLLQKPL-DL---GADVVLH 195 (390)
T ss_pred -----CCHHHHHHhcCC-CceEEEEECCCCCCcEeccHHHHHHHHHHcCCEEEEECCCCcccccCch-hh---CCcEEEe
Confidence 278999999987 899999985555 47889999999999999999999998765432221 12 5999999
Q ss_pred CCCCCCCCCce---EEEEEeC
Q 022564 255 TTHKSLRGPRG---AMIFFRK 272 (295)
Q Consensus 255 s~~K~l~gp~g---G~l~~~~ 272 (295)
|+||+++|+.| |++++++
T Consensus 196 S~tK~~~G~~~~laG~~v~~~ 216 (390)
T PRK08064 196 SATKFLAGHSDVLAGLAVVKD 216 (390)
T ss_pred ecceeccCCccceeEEEEeCC
Confidence 99999998874 8888775
No 140
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.77 E-value=7.4e-18 Score=154.37 Aligned_cols=157 Identities=21% Similarity=0.233 Sum_probs=116.1
Q ss_pred HHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeec
Q 022564 96 LCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL 175 (295)
Q Consensus 96 ~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 175 (295)
++++.+++++|.+. .+++++|+.|+..++.+++++||+|+++.+.|++.+.... ..+...|.++ +.++.
T Consensus 65 ~le~~la~l~g~~~-----~v~~ssG~~Ai~~al~al~~~Gd~Vi~~~~~y~~t~~~~~----~~~~~~G~~v--~~vd~ 133 (390)
T PRK08133 65 MFQERLAALEGAEA-----CVATASGMAAILAVVMALLQAGDHVVSSRSLFGSTVSLFE----KIFARFGIET--TFVDL 133 (390)
T ss_pred HHHHHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEccCcchhHHHHHH----HHHHHcCcEE--EEECC
Confidence 35588999999864 5666666668887888999999999999988877654221 1122345444 33332
Q ss_pred CCCCCCCCHHHHHHHHhhcCCcEEEEcCCCC--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCC-cceEE
Q 022564 176 NESTGYIDYDQLEKSATLFRPKLIVAGASAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE-YADVV 252 (295)
Q Consensus 176 ~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~-~~D~~ 252 (295)
+ |++++++++++ +||+|+++.++| +...|+++|.++|+++|+++++|++++.+.... ++. ++|++
T Consensus 134 ~------d~~~l~~~i~~-~tklV~ie~p~NptG~v~dl~~I~~la~~~gi~livD~t~~~~~~~~-----pl~~g~Div 201 (390)
T PRK08133 134 T------DLDAWRAAVRP-NTKLFFLETPSNPLTELADIAALAEIAHAAGALLVVDNCFCTPALQQ-----PLKLGADVV 201 (390)
T ss_pred C------CHHHHHHhcCc-CCeEEEEECCCCCCCCcCCHHHHHHHHHHcCCEEEEECCCcccccCC-----chhhCCcEE
Confidence 2 78999999987 899999974444 478899999999999999999999986554322 222 58999
Q ss_pred EeCCCCCCCCCc---eEEEEEeCCch
Q 022564 253 TTTTHKSLRGPR---GAMIFFRKGVK 275 (295)
Q Consensus 253 ~~s~~K~l~gp~---gG~l~~~~~~~ 275 (295)
++|++|+++|+. ||+++.+++..
T Consensus 202 v~S~sK~~~g~g~~~GG~vv~~~~~~ 227 (390)
T PRK08133 202 IHSATKYLDGQGRVLGGAVVGSKELM 227 (390)
T ss_pred EeecceeecCCcceEeEEEEcCHHHH
Confidence 999999997753 58888877643
No 141
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.77 E-value=6.6e-18 Score=154.63 Aligned_cols=158 Identities=14% Similarity=0.095 Sum_probs=117.8
Q ss_pred HHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecC
Q 022564 97 CQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 176 (295)
Q Consensus 97 ~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 176 (295)
+++.+++++|.+. .+++++|+.++.+++.+++++||+|+++.+.|++.+...... ....|... .. .
T Consensus 66 Le~~lA~l~G~~~-----al~~~sG~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~~~~----~~~~gi~~--~~--~- 131 (386)
T PRK06767 66 FEERMAVLEGGEE-----ALAFGSGMAAISATLIGFLKAGDHIICSNGLYGCTYGFLEVL----EEKFMITH--SF--C- 131 (386)
T ss_pred HHHHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHH----HhhcCeEE--EE--e-
Confidence 3488999999764 789999988888788899999999999998777664322111 11122212 11 1
Q ss_pred CCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEe
Q 022564 177 ESTGYIDYDQLEKSATLFRPKLIVAGASAYA--RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTT 254 (295)
Q Consensus 177 ~~~~~id~e~l~~~i~~~~tk~i~l~~~n~~--~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~ 254 (295)
...|++++++++++ +|++|+++.++|| ...|+++|.++|+++|+++++|++++.+.....+ . .++|++++
T Consensus 132 ---~~~d~~~l~~~i~~-~tklV~lesp~NptG~v~dl~~I~~la~~~g~~vivD~a~a~~~~~~pl-~---~g~Div~~ 203 (386)
T PRK06767 132 ---DMETEADIENKIRP-NTKLIFVETPINPTMKLIDLKQVIRVAKRNGLLVIVDNTFCSPYLQRPL-E---LGCDAVVH 203 (386)
T ss_pred ---CCCCHHHHHHhhCc-CceEEEEeCCCCCCceecCHHHHHHHHHHcCCEEEEECCCcccccCCch-h---cCCcEEEe
Confidence 12489999999987 8999999855554 7889999999999999999999998755443221 1 25999999
Q ss_pred CCCCCCCCCc---eEEEEEeCCchh
Q 022564 255 TTHKSLRGPR---GAMIFFRKGVKE 276 (295)
Q Consensus 255 s~~K~l~gp~---gG~l~~~~~~~~ 276 (295)
|++|+++|+. ||+++++++..+
T Consensus 204 S~sK~l~g~g~~~gG~v~~~~~~i~ 228 (386)
T PRK06767 204 SATKYIGGHGDVVAGVTICKTRALA 228 (386)
T ss_pred cCcceecCCCCceeEEEEeChHHHH
Confidence 9999998876 699999887543
No 142
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.77 E-value=5.7e-18 Score=154.18 Aligned_cols=165 Identities=12% Similarity=0.029 Sum_probs=117.1
Q ss_pred CcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccce
Q 022564 86 GNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVS 165 (295)
Q Consensus 86 ~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g 165 (295)
+++....+| +.++++.|.+. .+++.+|+.|+.+++.+++++||+|+++++.|++...... ......|
T Consensus 48 gnPt~~~lE----~~lA~l~g~~~-----~~~~~sG~~Ai~~al~all~~GD~Vl~~~~~y~~t~~~~~----~~~~~~g 114 (377)
T TIGR01324 48 GTLTHFALQ----DAMCELEGGAG-----CYLYPSGLAAVTNSILAFVKAGDHVLMVDSAYEPTRYFCD----IVLKRMG 114 (377)
T ss_pred CCccHHHHH----HHHHHHhCCCc-----EEEECcHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHHH----HHHHhcC
Confidence 334445555 78888888754 5566666668888899999999999999977765432110 0111234
Q ss_pred eeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCC--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCC
Q 022564 166 IFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIP 243 (295)
Q Consensus 166 ~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~ 243 (295)
..+..+ +.. +.+++++++++ +||+|+++.++| +...|+++|+++|+++|+++++|++|+.|.....+ .
T Consensus 115 i~v~~~--d~~------~~e~l~~~i~~-~tklV~lesp~Np~g~~~dl~~I~~la~~~g~~livD~t~a~g~~~~pl-~ 184 (377)
T TIGR01324 115 VDITYY--DPL------IGEDIATLIQP-NTKVLFLEAPSSITFEIQDIPAIAKAARNPGIVIMIDNTWAAGLLFKPL-E 184 (377)
T ss_pred cEEEEE--CCC------CHHHHHHhcCC-CceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccccccCcc-c
Confidence 333222 211 23789998887 899999974444 37889999999999999999999999988764322 2
Q ss_pred CCCCcceEEEeCCCCCCCCCc---eEEEEEeCCchh
Q 022564 244 SPFEYADVVTTTTHKSLRGPR---GAMIFFRKGVKE 276 (295)
Q Consensus 244 ~~~~~~D~~~~s~~K~l~gp~---gG~l~~~~~~~~ 276 (295)
. |+|++++|++||++|+. ||+++++++..+
T Consensus 185 ~---gaDivv~S~tK~l~G~~d~~gG~v~~~~~~~~ 217 (377)
T TIGR01324 185 H---GVDISIQAGTKYLVGHSDIMIGTVVANARTWD 217 (377)
T ss_pred c---CceEEEecCceeccCCCCceEEEEEeCHHHHH
Confidence 2 59999999999999875 488888776443
No 143
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.77 E-value=7.2e-18 Score=154.94 Aligned_cols=164 Identities=13% Similarity=0.134 Sum_probs=122.0
Q ss_pred chHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceee
Q 022564 88 EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIF 167 (295)
Q Consensus 88 ~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~ 167 (295)
+...+++ +.+++++|.+. .+++++|+.++.+++.+++++||+|+++.+.|++.+.... ..+...|.+
T Consensus 64 p~~~~Le----~~iA~~~g~~~-----~l~~~sG~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~~----~~~~~~G~~ 130 (400)
T PRK06234 64 PTSTEVE----NKLALLEGGEA-----AVVAASGMGAISSSLWSALKAGDHVVASDTLYGCTFALLN----HGLTRYGVE 130 (400)
T ss_pred ccHHHHH----HHHHHHhCCCc-----EEEEcCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHH----HHHhhCCeE
Confidence 4445555 78888888753 6777777778877888999999999999987776644321 122345544
Q ss_pred eEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCC--CCccCHHHHHHHHHHc--CCEEEEEccccccccccCCCC
Q 022564 168 FETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY--ARLYDYERIRKVCNKQ--KAIMLADMAHISGLVAAGVIP 243 (295)
Q Consensus 168 ~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~--~~~~~l~~I~~ia~~~--~~~vivD~a~~~g~~~~~~~~ 243 (295)
+..+ +. .|++++++++++ +||+|+++.++| |...|+++|.++|+++ |+++++|++++.+.....+ .
T Consensus 131 v~~v--d~------~d~e~l~~~i~~-~tklI~iesP~NPtG~v~dl~~I~~la~~~~~~i~livDea~~~~~~~~~l-~ 200 (400)
T PRK06234 131 VTFV--DT------SNLEEVRNALKA-NTKVVYLETPANPTLKVTDIKAISNIAHENNKECLVFVDNTFCTPYIQRPL-Q 200 (400)
T ss_pred EEEE--CC------CCHHHHHHHhcc-CCeEEEEECCCCCCCCcCCHHHHHHHHHhcCCCCEEEEECCCCchhcCCch-h
Confidence 4333 22 289999999987 899999985555 4788999999999997 9999999998876543211 1
Q ss_pred CCCCcceEEEeCCCCCCCCCc---eEEEEEeCCchhh
Q 022564 244 SPFEYADVVTTTTHKSLRGPR---GAMIFFRKGVKEI 277 (295)
Q Consensus 244 ~~~~~~D~~~~s~~K~l~gp~---gG~l~~~~~~~~~ 277 (295)
. ++|++++|++|+++|+. ||++++++++.+.
T Consensus 201 ~---g~Divv~S~sK~l~g~g~~~gG~v~~~~~~~~~ 234 (400)
T PRK06234 201 L---GADVVVHSATKYLNGHGDVIAGFVVGKEEFINQ 234 (400)
T ss_pred h---CCcEEEeeccccccCCCCceeEEEEecHHHHHH
Confidence 1 59999999999998765 5999998876443
No 144
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.77 E-value=6.2e-18 Score=156.31 Aligned_cols=157 Identities=15% Similarity=0.104 Sum_probs=117.8
Q ss_pred HHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeec
Q 022564 96 LCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL 175 (295)
Q Consensus 96 ~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 175 (295)
.+++.++++.|.+. .|+++||++|+.+++.+++++||+|+++..+|+++...... .+...|.++..+ +
T Consensus 73 ~le~~la~l~g~~~-----~v~fsSG~~Ai~~al~~ll~~Gd~VI~~~~~y~~t~~~~~~----~l~~~Gi~v~~v--d- 140 (437)
T PRK05613 73 ALENRIASLEGGVH-----AVAFASGQAAETAAILNLAGAGDHIVTSPRLYGGTETLFLV----TLNRLGIEVTFV--E- 140 (437)
T ss_pred HHHHHHHHHhCCCe-----EEEeCCHHHHHHHHHHHhcCCCCEEEECCCccHHHHHHHHH----HHHhcCeEEEEE--C-
Confidence 35588999999864 89999999977778888899999999999888887432211 112345444333 2
Q ss_pred CCCCCCCCHHHHHHHHhhcCCcEEEEc-CCCC-CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEE
Q 022564 176 NESTGYIDYDQLEKSATLFRPKLIVAG-ASAY-ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVT 253 (295)
Q Consensus 176 ~~~~~~id~e~l~~~i~~~~tk~i~l~-~~n~-~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~ 253 (295)
+ ..|++++++++++ +|++|++. .+|+ +.+.|+++|+++|+++|+++++|++|+.|.....+ .. |+|+++
T Consensus 141 ~----~~d~e~l~~~l~~-~tk~V~~e~~~Np~~~v~di~~I~~la~~~gi~livD~t~a~g~~~~p~-~~---GaDivv 211 (437)
T PRK05613 141 N----PDDPESWQAAVQP-NTKAFFGETFANPQADVLDIPAVAEVAHRNQVPLIVDNTIATAALVRPL-EL---GADVVV 211 (437)
T ss_pred C----CCCHHHHHHhCCc-cCeEEEEECCCCCCCcccCHHHHHHHHHHcCCeEEEECCCccccccChH-Hh---CCCEEE
Confidence 2 1289999999987 89988875 5555 58899999999999999999999999877553222 22 599999
Q ss_pred eCCCCCCCCCc---eEEEEEeCC
Q 022564 254 TTTHKSLRGPR---GAMIFFRKG 273 (295)
Q Consensus 254 ~s~~K~l~gp~---gG~l~~~~~ 273 (295)
+|+||+++|+. ||+++.+.+
T Consensus 212 ~S~~K~l~G~gd~~gG~vv~~~~ 234 (437)
T PRK05613 212 ASLTKFYTGNGSGLGGVLIDGGK 234 (437)
T ss_pred eeccceecCCCcceeEEEEecCc
Confidence 99999998763 466665544
No 145
>PLN02822 serine palmitoyltransferase
Probab=99.77 E-value=2.3e-17 Score=154.76 Aligned_cols=207 Identities=16% Similarity=0.188 Sum_probs=142.4
Q ss_pred HcCceecCCCC---CCCHHHHHHHhhhhhccCCCCCCCCc-ccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCC
Q 022564 46 WKGLELIPSEN---FTSVSVMQAVGSVMTNKYSEGYPGAR-YYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSG 121 (295)
Q Consensus 46 ~~~i~L~~~~~---~~~~~v~~al~~~l~~~~~~g~~~~~-~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG 121 (295)
++.++|..+.. ..+|++++++.+.+.+ |..++++++ +|+......+ +++.++++++.+. .|++++|
T Consensus 109 ~~~id~~s~~~lgl~~~~~i~ea~~~al~~-~G~g~~g~r~~yg~~~~~~~----Lee~La~~~~~~~-----~i~~s~G 178 (481)
T PLN02822 109 KDVVNFASANYLGLIGNEKIKESCTSALEK-YGVGSCGPRGFYGTIDVHLD----CETKIAKFLGTPD-----SILYSYG 178 (481)
T ss_pred ceEEEeECCCcCCCCCCHHHHHHHHHHHHH-hCCCCcccCccccCHHHHHH----HHHHHHHHhCCCC-----EEEECCH
Confidence 35688875533 2589999999999877 544555443 3455444444 4588888888653 7999999
Q ss_pred hHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhh--------
Q 022564 122 SPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL-------- 193 (295)
Q Consensus 122 ~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~-------- 193 (295)
.+++.+++.+++++||.|++....|.+... ++.+.+.++..+ +.+ |.++++..+++
T Consensus 179 ~~a~~sai~a~~~~gd~Ii~d~~~H~s~~~--------~~~ls~~~~~~~--~~n------d~~~l~~~l~~~~~~~~~~ 242 (481)
T PLN02822 179 LSTIFSVIPAFCKKGDIIVADEGVHWGIQN--------GLYLSRSTIVYF--KHN------DMESLRNTLEKLTAENKRK 242 (481)
T ss_pred HHHHHHHHHHhCCCCCEEEEeCCccHHHHH--------HHHHcCCeEEEE--CCC------CHHHHHHHHHHHhhhhccc
Confidence 887777999999999999987765544422 344555444333 322 34444444321
Q ss_pred cCC-cEEEEc--CCCCCCccCHHHHHHHHHHcCCEEEEEccccccccccCC----CCCCC--CcceEEEeCCCCCCCCCc
Q 022564 194 FRP-KLIVAG--ASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGV----IPSPF--EYADVVTTTTHKSLRGPR 264 (295)
Q Consensus 194 ~~t-k~i~l~--~~n~~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~----~~~~~--~~~D~~~~s~~K~l~gp~ 264 (295)
.++ ++|++. .++.|.+.|+++|.++|++||+++|+|++|+.|.+...- ...++ ...|++++|++|.| |..
T Consensus 243 ~~~~~~Ivve~i~~~~G~i~~L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKal-g~~ 321 (481)
T PLN02822 243 KKLRRYIVVEAIYQNSGQIAPLDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHAL-ATE 321 (481)
T ss_pred CCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecchhhh-hhC
Confidence 134 577775 444578999999999999999999999999988764210 11111 24799999999998 567
Q ss_pred eEEEEEeCCchhhhc
Q 022564 265 GAMIFFRKGVKEINK 279 (295)
Q Consensus 265 gG~l~~~~~~~~~~~ 279 (295)
||++++++++.+..+
T Consensus 322 GG~i~g~~~ii~~~~ 336 (481)
T PLN02822 322 GGFCTGSARVVDHQR 336 (481)
T ss_pred CeEEEcCHHHHHHHH
Confidence 799999988766544
No 146
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.76 E-value=3e-18 Score=155.89 Aligned_cols=200 Identities=17% Similarity=0.134 Sum_probs=137.1
Q ss_pred cCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-
Q 022564 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP- 123 (295)
Q Consensus 47 ~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~- 123 (295)
+.|+|+.|+|+ +++.+++++.+.+.+.. .||. .+..+ +++.++++++++++ +|++|+|++
T Consensus 30 ~~i~l~~nen~~~~~~~v~~a~~~~~~~~~--~Yp~-------~g~~~----Lr~aia~~~~~~~~----~I~vt~Gs~e 92 (366)
T PRK01533 30 SFVKLASNENPFGCSPRVLDELQKSWLDHA--LYPD-------GGATT----LRQTIANKLHVKME----QVLCGSGLDE 92 (366)
T ss_pred ceEEeCCCCCCCCCCHHHHHHHHHHHHhcC--cCCC-------CCHHH----HHHHHHHHhCCCcc----eEEECCCHHH
Confidence 56899999985 68899999987764411 1222 22333 44777888899887 899999999
Q ss_pred HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcC
Q 022564 124 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGA 203 (295)
Q Consensus 124 a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~ 203 (295)
++..++.+++++||+|++++|.| ..+...+...|.++..++ .+ ++.+|++++++++++ +++++++++
T Consensus 93 ~i~~~~~~l~~~gd~vlv~~P~y--------~~~~~~~~~~g~~v~~v~--~~--~~~~d~~~l~~~~~~-~~~~v~i~~ 159 (366)
T PRK01533 93 VIQIISRAVLKAGDNIVTAGATF--------PQYRHHAIIEGCEVKEVA--LN--NGVYDLDEISSVVDN-DTKIVWICN 159 (366)
T ss_pred HHHHHHHHhcCCCCEEEEcCCcH--------HHHHHHHHHcCCEEEEee--cC--CCCcCHHHHHHHhCc-CCcEEEEeC
Confidence 87778889999999999999544 444434456676665554 43 457999999999876 899999986
Q ss_pred CCCC--CccCHHHHHHH---HHHcCCEEEEEccccccccccCCCCCCC---C--cceEEEeCCCCCCC--CCceEEEEEe
Q 022564 204 SAYA--RLYDYERIRKV---CNKQKAIMLADMAHISGLVAAGVIPSPF---E--YADVVTTTTHKSLR--GPRGAMIFFR 271 (295)
Q Consensus 204 ~n~~--~~~~l~~I~~i---a~~~~~~vivD~a~~~g~~~~~~~~~~~---~--~~D~~~~s~~K~l~--gp~gG~l~~~ 271 (295)
|||| ...+.+++.++ |++++ ++|+|+++. .....+.....+ . ..-+++.|++|.|+ |.+-|+++++
T Consensus 160 P~NPTG~~~~~~~l~~l~~~~~~~~-~~iiDe~y~-~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~~ 237 (366)
T PRK01533 160 PNNPTGTYVNDRKLTQFIEGISENT-LIVIDEAYY-EYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGH 237 (366)
T ss_pred CCCCCCCCcCHHHHHHHHHhCCCCC-EEEEEccHH-HhhccccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhCC
Confidence 6664 66666655555 44555 677899975 222211100111 1 13488999999875 4444999998
Q ss_pred CCchhhh
Q 022564 272 KGVKEIN 278 (295)
Q Consensus 272 ~~~~~~~ 278 (295)
+++.+..
T Consensus 238 ~~~~~~l 244 (366)
T PRK01533 238 EELIEKL 244 (366)
T ss_pred HHHHHHH
Confidence 7765543
No 147
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.76 E-value=1.7e-17 Score=151.91 Aligned_cols=207 Identities=17% Similarity=0.152 Sum_probs=143.4
Q ss_pred HcCceecCCC--CC-CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCCh
Q 022564 46 WKGLELIPSE--NF-TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 122 (295)
Q Consensus 46 ~~~i~L~~~~--~~-~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~ 122 (295)
++.++|..++ .. ++|.+.+++.+.+.. +...... |....+..++++++++++++++|.+. .+++++|+
T Consensus 33 ~~~id~~~~~~~g~~~~~~~~~a~~~~~~~-~~~~~~~---~~~~~g~~~l~~~l~~~l~~~~g~~~-----~i~~~sG~ 103 (385)
T TIGR01825 33 KEVINLSSNNYLGFADHPRLKEAAAQAIQQ-YGVGAGA---VRTIAGTLRLHEELEEKLAKFKKTEA-----ALVFQSGF 103 (385)
T ss_pred ceEEEeeccCccCCCCCHHHHHHHHHHHHH-cCCCCCc---cCcccCCcHHHHHHHHHHHHHhCCCc-----EEEECcHH
Confidence 3568887664 33 688999999888764 2111111 22233446777788899999999653 79999998
Q ss_pred HHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhc---CCcEE
Q 022564 123 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF---RPKLI 199 (295)
Q Consensus 123 ~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~---~tk~i 199 (295)
+++..++.+++++||.|++.++.|+++.. ++.+.|... .++ ..+|++++++.+++. ++++|
T Consensus 104 ~a~~~a~~~~~~~gd~vi~~~~~~~~~~~--------~~~~~g~~~--~~~------~~~d~~~l~~~l~~~~~~~~~~v 167 (385)
T TIGR01825 104 NTNQGVLSALLRKGDIVLSDELNHASIID--------GLRLTKATK--KIY------KHADMDDLDRVLRENPSYGKKLI 167 (385)
T ss_pred HHHHHHHHHhCCCCCEEEEEccccHHHHH--------HHHhcCCce--EEe------CCCCHHHHHHHHHhhccCCCeEE
Confidence 87777888889999999999977776643 222334322 221 147888998887642 57787
Q ss_pred EEcC-CCC-CCccCHHHHHHHHHHcCCEEEEEccccccccccCC----CCCCC-CcceEEEeCCCCCCCCCceEEEEEeC
Q 022564 200 VAGA-SAY-ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGV----IPSPF-EYADVVTTTTHKSLRGPRGAMIFFRK 272 (295)
Q Consensus 200 ~l~~-~n~-~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~----~~~~~-~~~D~~~~s~~K~l~gp~gG~l~~~~ 272 (295)
+++. .|+ |...|+++|.++|++||+++|+|++|+.|...... ...++ ...|+++.|++|+|+ ..||+++.++
T Consensus 168 ~~~~v~~~tG~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~gG~~~~~~ 246 (385)
T TIGR01825 168 VTDGVFSMDGDVAPLPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLEDKVDIQVGTLSKAIG-VVGGYAAGHK 246 (385)
T ss_pred EEecCCcCCCCccCHHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCCcCCcEEEEeccHHhh-cCCCEEecCH
Confidence 7763 333 57889999999999999999999999877554110 01111 247899999999984 5678888887
Q ss_pred Cchhhh
Q 022564 273 GVKEIN 278 (295)
Q Consensus 273 ~~~~~~ 278 (295)
++.+..
T Consensus 247 ~~~~~~ 252 (385)
T TIGR01825 247 ELIEYL 252 (385)
T ss_pred HHHHHH
Confidence 765543
No 148
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.76 E-value=7.9e-18 Score=152.81 Aligned_cols=201 Identities=16% Similarity=0.146 Sum_probs=141.2
Q ss_pred cCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-
Q 022564 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP- 123 (295)
Q Consensus 47 ~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~- 123 (295)
+.++|..++++ +++.+.+++.+.+.. .. .+|. .+..++ ++.++++++++++ +|++|+|++
T Consensus 30 ~~i~l~~n~~~~~~~~~v~~a~~~~~~~-~~-~~p~-------~g~~~l----r~~ia~~~~~~~~----~i~~t~G~~~ 92 (359)
T PRK03158 30 KIVKLASNENPYGPSPKVKEAIAAHLDE-LA-LYPD-------GYAPEL----RTKVAKHLGVDEE----QLLFGAGLDE 92 (359)
T ss_pred ceEEecCCCCCCCCCHHHHHHHHHHHHH-hh-cCCC-------CcHHHH----HHHHHHHhCCCHH----HEEECCCHHH
Confidence 56889888774 688899998877643 10 1111 233444 4778888898876 899999999
Q ss_pred HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcC
Q 022564 124 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGA 203 (295)
Q Consensus 124 a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~ 203 (295)
++..++.+++++||+|++++|.|+.+. ..+...|.++..++ ++ ++.+|++++++.+++ +++++++++
T Consensus 93 ~l~~~~~~~~~~gd~v~~~~p~y~~~~--------~~~~~~g~~~~~~~--~~--~~~~d~~~l~~~~~~-~~~~v~i~~ 159 (359)
T PRK03158 93 VIQMISRALLNPGTNTVMAEPTFSQYR--------HNAIIEGAEVREVP--LK--DGGHDLEAMLKAIDE-QTKIVWICN 159 (359)
T ss_pred HHHHHHHHHhCCCCEEEEcCCCHHHHH--------HHHHHcCCeEEEEe--cC--CCCcCHHHHHHhcCC-CCCEEEEeC
Confidence 777677888999999999996655542 23335565555555 43 467899999998876 899999885
Q ss_pred CCC--CCccCHHHHHHHHHH--cCCEEEEEccccccccccCCCCCCC-----CcceEEEeCCCCCCC--CCceEEEEEeC
Q 022564 204 SAY--ARLYDYERIRKVCNK--QKAIMLADMAHISGLVAAGVIPSPF-----EYADVVTTTTHKSLR--GPRGAMIFFRK 272 (295)
Q Consensus 204 ~n~--~~~~~l~~I~~ia~~--~~~~vivD~a~~~g~~~~~~~~~~~-----~~~D~~~~s~~K~l~--gp~gG~l~~~~ 272 (295)
+|| |...+.++|.++++. +|+++|+|+++........ .+..+ ....+++.|++|.|+ |.+-|++++++
T Consensus 160 p~NPtG~~~~~~~l~~~~~~~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~ 238 (359)
T PRK03158 160 PNNPTGTYVNHEELLSFLESVPSHVLVVLDEAYYEYVTAED-YPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYGIASE 238 (359)
T ss_pred CCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchHhhcCCcc-cccHHHHHHhcCCEEEEEechHhhcCcchhhehhcCCH
Confidence 566 378888998888887 5999999999764332211 11110 024588899999885 44459999988
Q ss_pred Cchhhh
Q 022564 273 GVKEIN 278 (295)
Q Consensus 273 ~~~~~~ 278 (295)
++.+..
T Consensus 239 ~~~~~~ 244 (359)
T PRK03158 239 ELIEKL 244 (359)
T ss_pred HHHHHH
Confidence 765543
No 149
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.76 E-value=7.6e-17 Score=148.65 Aligned_cols=207 Identities=15% Similarity=0.063 Sum_probs=138.1
Q ss_pred HcCceecCCCC------CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCC--CCCCcceeEE
Q 022564 46 WKGLELIPSEN------FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWGVNVQ 117 (295)
Q Consensus 46 ~~~i~L~~~~~------~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~--~~~~~~~~v~ 117 (295)
.+.++|..|++ ++++.+.+++.+.+......+ |+...+..++++++++++....+. +++ +|+
T Consensus 31 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~~~------Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~----~ii 100 (403)
T TIGR01265 31 KPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFNG------YAPSVGALAAREAVAEYLSSDLPGKLTAD----DVV 100 (403)
T ss_pred CCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCCCC------CCCCCCCHHHHHHHHHHHHhhcCCCCCHH----HEE
Confidence 35788987765 468899999988775422112 334455566776565655544343 444 799
Q ss_pred eCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCC
Q 022564 118 SLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRP 196 (295)
Q Consensus 118 ~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~t 196 (295)
+|+|++ ++..++.+++++||+|+++.+.|+.+.. .+...|.++..++++.+ +++.+|++++++++++ ++
T Consensus 101 ~t~G~t~al~~~~~~l~~~gd~Vlv~~p~y~~~~~--------~~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~~~~-~~ 170 (403)
T TIGR01265 101 LTSGCSQAIEICIEALANPGANILVPRPGFPLYDT--------RAAFSGLEVRLYDLLPE-KDWEIDLDGLEALADE-KT 170 (403)
T ss_pred EecChHHHHHHHHHHhCCCCCEEEEeCCCchhHHH--------HHHHcCCEEEEecCCcc-cCCccCHHHHHHHhCc-Cc
Confidence 999999 8887888999999999999966554322 23345654544443212 3568999999999876 88
Q ss_pred cEEEEcCCCCC--Ccc---CHHHHHHHHHHcCCEEEEEccccccccccCCCCC--CCC-c-ceEEEeCCCCCCCCC--ce
Q 022564 197 KLIVAGASAYA--RLY---DYERIRKVCNKQKAIMLADMAHISGLVAAGVIPS--PFE-Y-ADVVTTTTHKSLRGP--RG 265 (295)
Q Consensus 197 k~i~l~~~n~~--~~~---~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~--~~~-~-~D~~~~s~~K~l~gp--~g 265 (295)
++++++.+||| ... ++++|.++|+++|+++|+|+++..-......... .+. . --+++.|++|.|+.| +-
T Consensus 171 ~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRi 250 (403)
T TIGR01265 171 VAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMASFASIVPVLSLGGISKRWVVPGWRL 250 (403)
T ss_pred cEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchhhhccCCcEEEEeecccccCCCcceE
Confidence 99988755553 444 4889999999999999999996533222111000 011 1 126789999986554 34
Q ss_pred EEEEEeC
Q 022564 266 AMIFFRK 272 (295)
Q Consensus 266 G~l~~~~ 272 (295)
|++++.+
T Consensus 251 G~~v~~~ 257 (403)
T TIGR01265 251 GWIIIHD 257 (403)
T ss_pred EEEEEeC
Confidence 9998853
No 150
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.76 E-value=8.2e-18 Score=154.67 Aligned_cols=158 Identities=16% Similarity=0.175 Sum_probs=117.4
Q ss_pred HHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecC
Q 022564 97 CQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 176 (295)
Q Consensus 97 ~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 176 (295)
+++.+++++|++. .+++++|+.++..++.+++++||+|+++.+.|++.+.... ..+...|.++..+ +.
T Consensus 70 le~~lA~l~g~~~-----~i~~~sG~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~~----~~~~~~G~~v~~v--d~- 137 (403)
T PRK07503 70 LEQRMASLEGGEA-----AVALASGMGAITATLWTLLRPGDEVIVDQTLYGCTFAFLH----HGLGEFGVTVRHV--DL- 137 (403)
T ss_pred HHHHHHHHhCCCc-----EEEEcCHHHHHHHHHHHHcCCCCEEEEccCccchHHHHHH----HHHhhCCEEEEEe--CC-
Confidence 4488999999875 6888888888777888889999999999877755432211 1222345444333 22
Q ss_pred CCCCCCCHHHHHHHHhhcCCcEEEEcCCCC--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEe
Q 022564 177 ESTGYIDYDQLEKSATLFRPKLIVAGASAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTT 254 (295)
Q Consensus 177 ~~~~~id~e~l~~~i~~~~tk~i~l~~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~ 254 (295)
.|++++++++++ +||+|+++.++| +...|+++|.++|+++|+++|+|++++.+.....+ . .++|++++
T Consensus 138 -----~d~~~l~~~i~~-~tklV~le~p~NPtG~~~di~~I~~la~~~gi~lIvD~a~a~~~~~~~l-~---~g~Di~v~ 207 (403)
T PRK07503 138 -----TDPAALKAAISD-KTRMVYFETPANPNMRLVDIAAVAEIAHGAGAKVVVDNTYCTPYLQRPL-E---LGADLVVH 207 (403)
T ss_pred -----CCHHHHHHhcCc-cCcEEEEeCCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccCCch-h---hCCCEEEc
Confidence 279999999987 899999974444 47889999999999999999999998766432111 1 15999999
Q ss_pred CCCCCCCCCc---eEEEEEeCCchh
Q 022564 255 TTHKSLRGPR---GAMIFFRKGVKE 276 (295)
Q Consensus 255 s~~K~l~gp~---gG~l~~~~~~~~ 276 (295)
|++|+++|+. ||+++.++++.+
T Consensus 208 S~tK~l~g~gd~~gG~v~~~~~l~~ 232 (403)
T PRK07503 208 SATKYLGGHGDITAGLVVGGKALAD 232 (403)
T ss_pred cccccccCCCceeEEEEEcCHHHHH
Confidence 9999998865 688887766544
No 151
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.76 E-value=1.3e-17 Score=152.49 Aligned_cols=200 Identities=17% Similarity=0.111 Sum_probs=138.5
Q ss_pred cCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-
Q 022564 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP- 123 (295)
Q Consensus 47 ~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~- 123 (295)
+.|+|+.|+|+ ++|.+++++.+.... .. |+.. ...+ +|+.+++++|++++ +|++|+|++
T Consensus 53 ~~i~l~~n~~p~~~~~~v~~a~~~~~~~---~~------Yp~~-~~~~----lr~~ia~~~~~~~~----~I~~t~Ga~~ 114 (380)
T PLN03026 53 DIVKLDANENPYGPPPEVLEALGNMKFP---YV------YPDP-ESRR----LRAALAEDSGLESE----NILVGCGADE 114 (380)
T ss_pred ceEEccCCCCCCCCCHHHHHHHHhhHhh---cc------CCCC-CHHH----HHHHHHHHhCcChh----hEEEcCCHHH
Confidence 56899999874 678888887642110 01 2221 2233 55888888999886 899999999
Q ss_pred HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcC
Q 022564 124 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGA 203 (295)
Q Consensus 124 a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~ 203 (295)
++..++.+++++||+|++++|.|+ .+...+...|.++..++ .+ +++.+|+++++++++..++++|++++
T Consensus 115 ~i~~~~~~~~~~gd~Vlv~~P~y~--------~y~~~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~~~~~~~~~v~l~~ 183 (380)
T PLN03026 115 LIDLLMRCVLDPGDKIIDCPPTFG--------MYVFDAAVNGAEVIKVP--RT-PDFSLDVPRIVEAVETHKPKLLFLTS 183 (380)
T ss_pred HHHHHHHHhcCCCCEEEEcCCChH--------HHHHHHHHcCCEEEEee--cC-CCCCcCHHHHHHHHhccCCcEEEEeC
Confidence 777788888999999999995543 33333445675554454 44 45789999999998433899999986
Q ss_pred CCCC--CccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCC--cceEEEeCCCCCCC--CCceEEEEEeCCchhh
Q 022564 204 SAYA--RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE--YADVVTTTTHKSLR--GPRGAMIFFRKGVKEI 277 (295)
Q Consensus 204 ~n~~--~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~--~~D~~~~s~~K~l~--gp~gG~l~~~~~~~~~ 277 (295)
+||| ...+.+++.++++.. ++||+|+++..-. ..+.....+. ...+++.|++|.++ |.+-|++++++++.+.
T Consensus 184 P~NPTG~~~~~~~l~~l~~~~-~~vi~DeaY~~~~-~~~~~~~~~~~~~~viv~~SfSK~~glaGlRiGy~~~~~~~i~~ 261 (380)
T PLN03026 184 PNNPDGSIISDDDLLKILELP-ILVVLDEAYIEFS-TQESRMKWVKKYDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEY 261 (380)
T ss_pred CCCCCCCCCCHHHHHHHHhcC-CEEEEECcchhhc-CCcchHHHHHhCCCEEEEecchHhhcCccccceeeecCHHHHHH
Confidence 6664 888999999999865 8999999975221 1110000001 14588999999874 4444999998776543
No 152
>PRK05939 hypothetical protein; Provisional
Probab=99.76 E-value=1.2e-17 Score=153.00 Aligned_cols=158 Identities=13% Similarity=0.123 Sum_probs=117.7
Q ss_pred CcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccce
Q 022564 86 GNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVS 165 (295)
Q Consensus 86 ~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g 165 (295)
+++....+| +.++++.|.+. .+.+++|..|+.+++.+++++||+|+++++.|+++...... +...|
T Consensus 45 g~p~~~~lE----~~la~leg~~~-----~v~~ssG~~Ai~~~l~all~~Gd~Vv~~~~~y~~t~~~~~~-----l~~~G 110 (397)
T PRK05939 45 GTPTTAALE----AKITKMEGGVG-----TVCFATGMAAIAAVFLTLLRAGDHLVSSQFLFGNTNSLFGT-----LRGLG 110 (397)
T ss_pred CCHHHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHHHHHHcCCCCEEEECCCccccHHHHHHH-----HHhcC
Confidence 334455555 88888999876 78999998888888889999999999999888876543321 22345
Q ss_pred eeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCC--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCC
Q 022564 166 IFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIP 243 (295)
Q Consensus 166 ~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~ 243 (295)
.++..+ +. .|++++++++++ +|++|+++.++| +...|+++|+++|+++|+++++|++|+.+... +...
T Consensus 111 ~~v~~v--~~------~d~e~l~~~l~~-~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~t~a~~~~~-~~~~ 180 (397)
T PRK05939 111 VEVTMV--DA------TDVQNVAAAIRP-NTRMVFVETIANPGTQVADLAGIGALCRERGLLYVVDNTMTSPWLF-RPKD 180 (397)
T ss_pred CEEEEE--CC------CCHHHHHHhCCC-CCeEEEEECCCCCCCCHHhHHHHHHHHHHcCCEEEEECCccccccc-Cccc
Confidence 444333 22 389999999987 899999974444 47889999999999999999999998776432 1111
Q ss_pred CCCCcceEEEeCCCCCCCCCce--EEEEE
Q 022564 244 SPFEYADVVTTTTHKSLRGPRG--AMIFF 270 (295)
Q Consensus 244 ~~~~~~D~~~~s~~K~l~gp~g--G~l~~ 270 (295)
. |+|+++.|++|+++|+.. |.+++
T Consensus 181 ~---gaDivv~S~sK~~~g~g~~igg~v~ 206 (397)
T PRK05939 181 V---GASLVINSLSKYIAGHGNALGGAVT 206 (397)
T ss_pred c---CCEEEEecCeecccCCCCeEEEEEe
Confidence 2 599999999999988654 44444
No 153
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.76 E-value=2e-18 Score=156.47 Aligned_cols=166 Identities=22% Similarity=0.289 Sum_probs=125.5
Q ss_pred HHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEee
Q 022564 95 SLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPY 173 (295)
Q Consensus 95 ~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 173 (295)
.++++.+++.||++. ..++++|++ ++.+++++++++||+||+...+|-|++. ++.+.|+...+++-
T Consensus 69 ~eAe~~aA~~fGAd~-----t~flvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~~--------alil~ga~Pvyi~p 135 (417)
T PF01276_consen 69 KEAEELAARAFGADK-----TFFLVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVYN--------ALILSGAIPVYIPP 135 (417)
T ss_dssp HHHHHHHHHHHTESE-----EEEESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHHH--------HHHHHTEEEEEEEE
T ss_pred HHHHHHHHHhcCCCe-----EEEEecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHHH--------HHHHcCCeEEEecC
Confidence 346689999999987 789999999 9999999999999999999999988866 44477877766653
Q ss_pred ecCCCCC---CCCH-----HHHHHHHhhc-CCcE---EEEcCCCC-CCccCHHHHHHHHHHcCCEEEEEccccccccccC
Q 022564 174 RLNESTG---YIDY-----DQLEKSATLF-RPKL---IVAGASAY-ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAG 240 (295)
Q Consensus 174 ~~~~~~~---~id~-----e~l~~~i~~~-~tk~---i~l~~~n~-~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~ 240 (295)
. +.+.+ .+++ +.+++++++. ..|. +++++|+| |...|+++|+++|++++++|++|+||++......
T Consensus 136 ~-~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~~ 214 (417)
T PF01276_consen 136 E-DNEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTYYGVCYDIKEIAEICHKHGIPLLVDEAHGAHFGFHP 214 (417)
T ss_dssp E-E-TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-TTSEEE-HHHHHHHHCCTECEEEEE-TT-TTGGCSG
T ss_pred C-ccccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCCCeEEECHHHHHHHhcccCCEEEEEccccccccCCC
Confidence 3 32222 4566 9999999752 2344 88888888 8999999999999999999999999987655544
Q ss_pred CCCCCCC-cce-------EEEeCCCCCCCCCce-EEEEEeCCc
Q 022564 241 VIPSPFE-YAD-------VVTTTTHKSLRGPRG-AMIFFRKGV 274 (295)
Q Consensus 241 ~~~~~~~-~~D-------~~~~s~~K~l~gp~g-G~l~~~~~~ 274 (295)
+....+. |+| +++.|.||++++... ++|.++.+.
T Consensus 215 lp~~a~~~gad~~~~~~~~vvqS~HKtL~altQts~lh~~~~~ 257 (417)
T PF01276_consen 215 LPRSALALGADRPNDPGIIVVQSTHKTLPALTQTSMLHVKGDR 257 (417)
T ss_dssp GGTTCSSTTSS-CTSBEEEEEEEHHHHSSS-TT-EEEEEETCC
T ss_pred CccchhhccCccccccceeeeechhhcccccccceEEEecCCC
Confidence 4433333 689 999999999999877 999988874
No 154
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.76 E-value=5e-17 Score=149.41 Aligned_cols=209 Identities=14% Similarity=0.150 Sum_probs=143.2
Q ss_pred cCceecCCCC--CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCC--CCCCcceeEEeCCCh
Q 022564 47 KGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWGVNVQSLSGS 122 (295)
Q Consensus 47 ~~i~L~~~~~--~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~--~~~~~~~~v~~~sG~ 122 (295)
..++|..+.+ .+++.+.+++.+.+.... .....|+...+...+++.+.+++.+.++. +++ +|++++|+
T Consensus 34 ~~~~l~~g~p~~~~~~~v~~a~~~~~~~~~----~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~----~i~~t~G~ 105 (394)
T PRK06836 34 NVFDFSLGNPSVPPPAAVKEALRELAEEED----PGLHGYMPNAGYPEVREAIAESLNRRFGTPLTAD----HIVMTCGA 105 (394)
T ss_pred CeEEecCcCCCCCCCHHHHHHHHHHHhcCC----cCcccCCCCCCCHHHHHHHHHHHHHHhCCCCCcC----cEEEeCCh
Confidence 3478876665 357888888887765421 11122445566778887777887766554 665 89999999
Q ss_pred H-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEE
Q 022564 123 P-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA 201 (295)
Q Consensus 123 ~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l 201 (295)
+ ++..++.+++++||.|+++++.|+.+.. .+...|.++..++ .+++++.+|++++++++++ +++++++
T Consensus 106 ~~al~~~~~~l~~~gd~Vli~~p~~~~~~~--------~~~~~g~~v~~v~--~~~~~~~~d~~~l~~~~~~-~~~~v~~ 174 (394)
T PRK06836 106 AGALNVALKAILNPGDEVIVFAPYFVEYRF--------YVDNHGGKLVVVP--TDTDTFQPDLDALEAAITP-KTKAVII 174 (394)
T ss_pred HHHHHHHHHHhcCCCCEEEEcCCCCccHHH--------HHHHcCCEEEEEe--cCCccCcCCHHHHHhhcCc-CceEEEE
Confidence 8 7776888899999999999976665432 2234565554444 5544578999999999976 8999998
Q ss_pred cCCCCC--Ccc---CHHHHHHHHHH------cCCEEEEEccccccccccCCCCC--CCCcceEEEeCCCCCCCCC--ceE
Q 022564 202 GASAYA--RLY---DYERIRKVCNK------QKAIMLADMAHISGLVAAGVIPS--PFEYADVVTTTTHKSLRGP--RGA 266 (295)
Q Consensus 202 ~~~n~~--~~~---~l~~I~~ia~~------~~~~vivD~a~~~g~~~~~~~~~--~~~~~D~~~~s~~K~l~gp--~gG 266 (295)
+.+||| ... .+++|+++|++ ||+++|+|+++..-......... ......+++.|++|.|+.| +-|
T Consensus 175 ~~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~pGlRiG 254 (394)
T PRK06836 175 NSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFKYYDNSIVVYSFSKSLSLPGERIG 254 (394)
T ss_pred eCCCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCCChHHccCcEEEEecchhhccCcceeeE
Confidence 755553 444 46778888998 89999999996532221101110 0112468899999988644 349
Q ss_pred EEEEeCCc
Q 022564 267 MIFFRKGV 274 (295)
Q Consensus 267 ~l~~~~~~ 274 (295)
+++++++.
T Consensus 255 ~~~~~~~~ 262 (394)
T PRK06836 255 YIAVNPEM 262 (394)
T ss_pred EEecCHHH
Confidence 99998765
No 155
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.76 E-value=4.2e-18 Score=155.57 Aligned_cols=194 Identities=11% Similarity=0.045 Sum_probs=136.4
Q ss_pred CceecCCCCCCCHH-HHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCC-ChH-H
Q 022564 48 GLELIPSENFTSVS-VMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLS-GSP-S 124 (295)
Q Consensus 48 ~i~L~~~~~~~~~~-v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~s-G~~-a 124 (295)
-++|++|...+++. |++++...+.... ++ + ....++.+.+++.+++++|++.+. +|++++ +++ +
T Consensus 13 ~~~f~~Gp~~~~~~~v~~a~~~~~~~~~--------hr-~-~~f~~~~~~~r~~l~~l~~~~~~~---~v~~~~gs~T~~ 79 (378)
T PRK03080 13 DPRFSSGPCKKRPGWQLEALADALLGRS--------HR-Q-KPVKALLKRVIEGTRELLSLPEGY---EVGIVPGSDTGA 79 (378)
T ss_pred CCCcCCCCcCCChHHHHHHHHhhhcccC--------cC-C-HHHHHHHHHHHHHHHHHhCCCCCc---eEEEECCchHHH
Confidence 46788888777777 9999986543210 01 1 245677778999999999984321 677664 444 7
Q ss_pred HHHHHHhhcCC-CCeEEEecCCCCcccCcccccccccccccee-eeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEc
Q 022564 125 NFQVYTALLKP-HDRIMALDLPHGGHLSHGYQTDTKKISAVSI-FFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 202 (295)
Q Consensus 125 ~~~~~~al~~~-gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~ 202 (295)
+.+++.+++++ ++.|+. .-+|++.+... . .+..|. +++.++. + .+..+|+++++ .+++|.++
T Consensus 80 ~~~~~~~l~~~~~~~vi~-~g~f~~~~~~~--~----~~~~g~~~v~~~~~--~-~g~~~d~~~i~------~~~~V~~~ 143 (378)
T PRK03080 80 WEMALWSLLGARRVDHLA-WESFGSKWATD--V----VKQLKLEDPRVLEA--D-YGSLPDLSAVD------FDRDVVFT 143 (378)
T ss_pred HHHHHHhcCCCCcceEEE-eCHHHHHHHHH--H----HhhcCCCCceEecc--C-CCCCCCHhhcC------CCCCEEEE
Confidence 77788888875 555554 45666532210 0 112344 4555543 3 34577877743 24566665
Q ss_pred --CCCCCCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCce-EEEEEeCCchhh
Q 022564 203 --ASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEI 277 (295)
Q Consensus 203 --~~n~~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~ 277 (295)
.+..|...|+++|++ +++|+++++|++|++|..+.++.. +|++++|+||||+||.| |+++++++..+.
T Consensus 144 h~~t~tG~~~pi~~I~~--~~~g~~~vVDa~qs~G~~pidv~~-----iD~~~~s~~K~l~~P~G~g~l~v~~~~~~~ 214 (378)
T PRK03080 144 WNGTTTGVRVPVARWIG--ADREGLTICDATSAAFALPLDWSK-----LDVYTFSWQKVLGGEGGHGMAILSPRAVER 214 (378)
T ss_pred ecCCccceeccchhhcc--ccCCCeEEEecccccccCCCCHHH-----CcEEEEehhhhCCCCCceEEEEECHHHHHh
Confidence 444479999999999 889999999999999999988764 79999999999999999 999999987654
No 156
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.76 E-value=9.6e-18 Score=153.82 Aligned_cols=158 Identities=18% Similarity=0.188 Sum_probs=117.6
Q ss_pred HHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecC
Q 022564 97 CQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 176 (295)
Q Consensus 97 ~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 176 (295)
+++.++++.|.+. .+++++|+.|+..++.+++++||+|+++.+.|++....+.. .+...|.++ .. ++
T Consensus 69 le~~lA~l~g~~~-----~i~~ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~~----~~~~~Gi~v--~~--vd 135 (398)
T PRK08249 69 FEEKVRILEGAEA-----ATAFSTGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFTE----FLPRMGVDV--TL--CE 135 (398)
T ss_pred HHHHHHHHhCCCe-----EEEeCChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHH----HHhhCCeEE--EE--cC
Confidence 4488999999765 78888998888878889999999999999888765432211 112334333 22 22
Q ss_pred CCCCCCCHHHHHHHHhhcCCcEEEEcCCCC--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEe
Q 022564 177 ESTGYIDYDQLEKSATLFRPKLIVAGASAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTT 254 (295)
Q Consensus 177 ~~~~~id~e~l~~~i~~~~tk~i~l~~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~ 254 (295)
..|++++++++++ +||+|+++.++| +...|+++|.++|+++|+++++|++++.+.... +.. .++|+++.
T Consensus 136 ----~~d~e~l~~~i~~-~tklV~ie~p~NPtg~v~dl~~I~~la~~~gi~livD~t~a~~~~~~---~l~-~~~Divv~ 206 (398)
T PRK08249 136 ----TGDHEQIEAEIAK-GCDLLYLETPTNPTLKIVDIERLAAAAKKVGALVVVDNTFATPINQN---PLA-LGADLVIH 206 (398)
T ss_pred ----CCCHHHHHHhcCC-CCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCcCccccCC---chh-hCCCEEec
Confidence 3589999999987 899999975555 378899999999999999999999987554321 111 25999999
Q ss_pred CCCCCCCCCc---eEEEEEeCCchh
Q 022564 255 TTHKSLRGPR---GAMIFFRKGVKE 276 (295)
Q Consensus 255 s~~K~l~gp~---gG~l~~~~~~~~ 276 (295)
|++|+++|+. ||+++.++++.+
T Consensus 207 S~sK~l~g~~~~~gG~vv~~~~l~~ 231 (398)
T PRK08249 207 SATKFLSGHADALGGVVCGSKELME 231 (398)
T ss_pred cCceecCCCCCceEEEEECCHHHHH
Confidence 9999998764 488777666543
No 157
>PLN02263 serine decarboxylase
Probab=99.76 E-value=6e-17 Score=148.97 Aligned_cols=172 Identities=12% Similarity=0.044 Sum_probs=125.9
Q ss_pred hHHHHHHHHHHHHHHHcCCCCC-CcceeEEeCCChH-HHHHHHHhh--cCCCCeEEEecCCCCcccCccccccccccccc
Q 022564 89 YIDMAESLCQKRALEAFRLDPE-KWGVNVQSLSGSP-SNFQVYTAL--LKPHDRIMALDLPHGGHLSHGYQTDTKKISAV 164 (295)
Q Consensus 89 ~~~~l~~~~~~~la~~~g~~~~-~~~~~v~~~sG~~-a~~~~~~al--~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~ 164 (295)
...++|..+.+|+++++|.+++ .| -++|+|++ +|+.++.+. ..+...+++++..|.++.. ++.+.
T Consensus 130 ~s~~~E~~Vi~wla~L~g~p~~~~~---G~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv~K--------Aa~ll 198 (470)
T PLN02263 130 HSRQFEVGVLDWFARLWEIEKNEYW---GYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFK--------AARMY 198 (470)
T ss_pred hHHHHHHHHHHHHHHHhCCCCCCCe---EEEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHHHH--------HHHhc
Confidence 4678999999999999999763 33 35677777 888666554 2234467777766666543 55577
Q ss_pred eeeeEEEeeecCCCCCCCCHHHHHHHHhhcC--CcEEEEc--CCCCCCccCHHHHHHHHHHcCC-----EEEEEcccccc
Q 022564 165 SIFFETMPYRLNESTGYIDYDQLEKSATLFR--PKLIVAG--ASAYARLYDYERIRKVCNKQKA-----IMLADMAHISG 235 (295)
Q Consensus 165 g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~--tk~i~l~--~~n~~~~~~l~~I~~ia~~~~~-----~vivD~a~~~g 235 (295)
|.++..+| ++ +++++|+++|++++.+.. +-+|+.+ .++.|.+.|+++|+++|+++|+ |+++|+|.+..
T Consensus 199 gi~~~~Vp--~d-~~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~ 275 (470)
T PLN02263 199 RMECVKVD--TL-VSGEIDCADFKAKLLANKDKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGALFGL 275 (470)
T ss_pred CCcceEec--cC-CCCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccchhh
Confidence 76665565 55 678999999999997622 3344444 5555799999999999999997 99999997655
Q ss_pred ccccCCCCCCCC---cceEEEeCCCCCCCCCce-EEEEEeCCc
Q 022564 236 LVAAGVIPSPFE---YADVVTTTTHKSLRGPRG-AMIFFRKGV 274 (295)
Q Consensus 236 ~~~~~~~~~~~~---~~D~~~~s~~K~l~gp~g-G~l~~~~~~ 274 (295)
.++.-....++. .+|.++.++|||++.|.+ |++++|++.
T Consensus 276 ~lPf~~~~~~~df~~~vDSIsvD~HK~l~~P~~cgvll~R~~~ 318 (470)
T PLN02263 276 MMPFVKRAPKVTFKKPIGSVSVSGHKFVGCPMPCGVQITRMEH 318 (470)
T ss_pred HhhhcccccccCCCcCccEEEECCccccCCCcCEEEEEEehhh
Confidence 554321111222 399999999999999999 999999764
No 158
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.76 E-value=1.4e-17 Score=156.22 Aligned_cols=204 Identities=13% Similarity=0.094 Sum_probs=136.0
Q ss_pred cCceecCCCC--CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHH-HHHcCC--CC-CCcceeEEeCC
Q 022564 47 KGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA-LEAFRL--DP-EKWGVNVQSLS 120 (295)
Q Consensus 47 ~~i~L~~~~~--~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~l-a~~~g~--~~-~~~~~~v~~~s 120 (295)
+.|+|..|++ .+|+.+.+ +.+.+... .|+...+..++++++.+.+ .+..+. .+ ++ .+|++|+
T Consensus 101 ~~i~l~~g~p~~~~~~~v~e-~~~~~~~~---------~Y~~~~g~~~lreaia~~~~~~~~~~~~~~~~~--~~I~vT~ 168 (527)
T PRK09275 101 DAVSYVRDQLGFDADEFVYE-LVDGIIGD---------NYPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGE--FDLFAVE 168 (527)
T ss_pred HHHhhcCCCCCCCCCHHHHH-HHHHHhcC---------CCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCc--CeEEEeC
Confidence 5688888877 34666666 44444221 1445566778887777644 443322 22 11 1899999
Q ss_pred ChH-HHHHHHHh-----hcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCC-CCCCCCHHHHHHHHhh
Q 022564 121 GSP-SNFQVYTA-----LLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE-STGYIDYDQLEKSATL 193 (295)
Q Consensus 121 G~~-a~~~~~~a-----l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~id~e~l~~~i~~ 193 (295)
|++ ++..++.+ +++|||+|++++|.|+. |...+.+.|...+.++++.++ +++.+|++++++++++
T Consensus 169 Ga~~al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~--------Y~~~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~~ 240 (527)
T PRK09275 169 GGTAAMCYIFDSLKENGLLKAGDKIALMTPIFTP--------YLEIPELPRYDLEVVHINADEENEWQYPDSELEKLRDP 240 (527)
T ss_pred CHHHHHHHHHHHHhhhhcCCCCCEEEEeCCChHH--------HHHHHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcCC
Confidence 999 77767765 68999999999954444 433444555556667766543 3579999999998876
Q ss_pred cCCcEEEEcCCCCC--Ccc---CHHHHHHHHHH--cCCEEEEEccccccccccCCCCC-C-CCcceEEEeCCCCCC--CC
Q 022564 194 FRPKLIVAGASAYA--RLY---DYERIRKVCNK--QKAIMLADMAHISGLVAAGVIPS-P-FEYADVVTTTTHKSL--RG 262 (295)
Q Consensus 194 ~~tk~i~l~~~n~~--~~~---~l~~I~~ia~~--~~~~vivD~a~~~g~~~~~~~~~-~-~~~~D~~~~s~~K~l--~g 262 (295)
++|+|++++|||| ... .+++|+++|++ ++++||+|+++..- .. ..... . +...-+++.|++|+| .|
T Consensus 241 -~tkai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f-~~-~~~s~~~~~~~~~I~v~SfSK~f~mtG 317 (527)
T PRK09275 241 -SIKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTF-VD-DFRSLFAVLPYNTILVYSFSKYFGATG 317 (527)
T ss_pred -CCCEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhh-cc-cccCHHHhCCCCEEEEeehhhhccCcH
Confidence 8999999866664 343 47788899965 59999999997532 11 11100 0 112448899999987 46
Q ss_pred CceEEEEEeCC
Q 022564 263 PRGAMIFFRKG 273 (295)
Q Consensus 263 p~gG~l~~~~~ 273 (295)
++-|+++++++
T Consensus 318 ~RlG~i~~~~~ 328 (527)
T PRK09275 318 WRLGVIALHED 328 (527)
T ss_pred hHHhhhhcCch
Confidence 66799999876
No 159
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.75 E-value=1.3e-17 Score=151.75 Aligned_cols=163 Identities=10% Similarity=0.036 Sum_probs=122.3
Q ss_pred CcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccce
Q 022564 86 GNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVS 165 (295)
Q Consensus 86 ~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g 165 (295)
+++....+| +.++++-|.+. .+++.||+.|+.+++.+++++||+|+++...|++....... .....|
T Consensus 60 ~nPt~~~le----~~la~LEg~~~-----a~~~~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~~~----~l~~~G 126 (395)
T PRK08114 60 GTLTHFSLQ----EAMCELEGGAG-----CALYPCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFCSK----ILSKLG 126 (395)
T ss_pred CChhHHHHH----HHHHHHhCCCe-----EEEEhHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHHHH----HHHhcC
Confidence 444555566 78888888765 68888988888888899999999999998777766543211 111235
Q ss_pred eeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEc-CCCC-CCccCHHHHHHHHHHcC--CEEEEEccccccccccCC
Q 022564 166 IFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASAY-ARLYDYERIRKVCNKQK--AIMLADMAHISGLVAAGV 241 (295)
Q Consensus 166 ~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~-~~n~-~~~~~l~~I~~ia~~~~--~~vivD~a~~~g~~~~~~ 241 (295)
.++..+ + ..|.+++++++++ +||+|++. ++|+ +.+.|+++|+++||+++ +++++|++++.+.. .+.
T Consensus 127 i~v~~v----d----~~d~~~l~~~l~~-~TrlV~~EtpsNp~~~v~DI~~Ia~ia~~~g~g~~lvVDnT~a~p~~-~~p 196 (395)
T PRK08114 127 VTTTWF----D----PLIGADIAKLIQP-NTKVVFLESPGSITMEVHDVPAIVAAVRSVNPDAVIMIDNTWAAGVL-FKA 196 (395)
T ss_pred cEEEEE----C----CCCHHHHHHhcCC-CceEEEEECCCCCCCEeecHHHHHHHHHHhCCCCEEEEECCCccccc-cCH
Confidence 434332 2 2378999999987 89999996 5555 38899999999999984 99999999988766 444
Q ss_pred CCCCCCcceEEEeCCCCCCCCCc--e-EEEEEeCCc
Q 022564 242 IPSPFEYADVVTTTTHKSLRGPR--G-AMIFFRKGV 274 (295)
Q Consensus 242 ~~~~~~~~D~~~~s~~K~l~gp~--g-G~l~~~~~~ 274 (295)
..++ +|++++|+|||++|+. + |+++.+++.
T Consensus 197 l~~G---aDivv~S~tKyl~Ghsdv~~G~v~~~~~~ 229 (395)
T PRK08114 197 LDFG---IDISIQAGTKYLVGHSDAMIGTAVANARC 229 (395)
T ss_pred HHcC---CcEEEEcCcccccCCCcceeEEEEcCHHH
Confidence 4444 9999999999999995 3 877777654
No 160
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.75 E-value=1.2e-17 Score=152.43 Aligned_cols=155 Identities=12% Similarity=0.090 Sum_probs=109.6
Q ss_pred HHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecC
Q 022564 97 CQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 176 (295)
Q Consensus 97 ~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 176 (295)
+++.++++.+.+. .+++.+|+.|+.+++.+++++||+|+++++.|++....... .....|.++..+ +.
T Consensus 66 Le~~iA~le~~~~-----~~~~~sG~~Ai~~~l~all~~GD~Vvv~~~~Y~~t~~l~~~----~l~~~Gi~v~~v--~~- 133 (394)
T PRK09028 66 FQAAIVELEGGAG-----TALYPSGAAAISNALLSFLKAGDHLLMVDSCYEPTRDLCDK----ILKGFGIETTYY--DP- 133 (394)
T ss_pred HHHHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHH----hhhhcceEEEEE--CC-
Confidence 3377777776542 45555555588878899999999999999887666432110 111234333222 21
Q ss_pred CCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCC-cceEEE
Q 022564 177 ESTGYIDYDQLEKSATLFRPKLIVAGASAYA--RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE-YADVVT 253 (295)
Q Consensus 177 ~~~~~id~e~l~~~i~~~~tk~i~l~~~n~~--~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~-~~D~~~ 253 (295)
-|.+++++++++ +||+|+++.++|| ...|+++|+++|+++|+++++|++++.+.. +. |+. |+|+++
T Consensus 134 -----~~~e~l~~~l~~-~TklV~lespsNPtg~v~dl~~I~~la~~~g~~lvvD~t~a~p~~---~~--Pl~~GaDivv 202 (394)
T PRK09028 134 -----MIGEGIRELIRP-NTKVLFLESPGSITMEVQDVPTLSRIAHEHDIVVMLDNTWASPIN---SR--PFEMGVDISI 202 (394)
T ss_pred -----CCHHHHHHhcCc-CceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCcccccc---CC--ccccCceEEE
Confidence 156889998876 8999999855554 788999999999999999999999987642 21 223 599999
Q ss_pred eCCCCCCCCCce---EEEEEeCCc
Q 022564 254 TTTHKSLRGPRG---AMIFFRKGV 274 (295)
Q Consensus 254 ~s~~K~l~gp~g---G~l~~~~~~ 274 (295)
.|+|||++|+.. |+++.++++
T Consensus 203 ~S~tK~l~Gh~d~~~G~~~~~~~~ 226 (394)
T PRK09028 203 QAATKYIVGHSDVMLGTATANEKH 226 (394)
T ss_pred EeCCeEecCCCCEEEEEEECCHHH
Confidence 999999999863 766655544
No 161
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.75 E-value=1.4e-17 Score=151.84 Aligned_cols=154 Identities=14% Similarity=0.112 Sum_probs=113.8
Q ss_pred HHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecC
Q 022564 97 CQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 176 (295)
Q Consensus 97 ~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 176 (295)
+++.++++.|.+. .++++||+.++.++ .++++|||+|+++++.|++.+..... .+...|..+..+ +
T Consensus 55 Le~~la~l~g~~~-----al~~~SG~~Al~~~-l~~l~pGd~Vi~~~~~y~~t~~~~~~----~~~~~gi~v~~v----d 120 (380)
T PRK06176 55 LEELIADLEGGVK-----GFAFASGLAGIHAV-FSLFQSGDHVLLGDDVYGGTFRLFDK----VLVKNGLSCTII----D 120 (380)
T ss_pred HHHHHHHHhCCCC-----EEEECCHHHHHHHH-HHHcCCCCEEEEcCCChhHHHHHHHH----HHHhcCeEEEEc----C
Confidence 4488999999776 78999998877644 46789999999999887766532221 122334333222 2
Q ss_pred CCCCCCCHHHHHHHHhhcCCcEEEEcCCCC--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEe
Q 022564 177 ESTGYIDYDQLEKSATLFRPKLIVAGASAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTT 254 (295)
Q Consensus 177 ~~~~~id~e~l~~~i~~~~tk~i~l~~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~ 254 (295)
..|++++++++++ +|++|++..++| +...|+++|.++|+++|+++++|++++.+...... . .++|++++
T Consensus 121 ----~~d~e~l~~ai~~-~t~lV~lesP~Nptg~~~di~~I~~la~~~gi~vivD~t~a~~~~~~p~-~---~gaDivv~ 191 (380)
T PRK06176 121 ----TSDLSQIKKAIKP-NTKALYLETPSNPLLKITDLAQCASVAKDHGLLTIVDNTFATPYYQNPL-L---LGADIVVH 191 (380)
T ss_pred ----CCCHHHHHHhcCc-CceEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEECCccccccCCcc-c---cCCCEEEe
Confidence 2389999999987 899999974554 37889999999999999999999998765432211 1 25999999
Q ss_pred CCCCCCCCCc---eEEEEEeCC
Q 022564 255 TTHKSLRGPR---GAMIFFRKG 273 (295)
Q Consensus 255 s~~K~l~gp~---gG~l~~~~~ 273 (295)
|++|+++||. ||+++++++
T Consensus 192 S~tK~l~g~~d~~gG~vv~~~~ 213 (380)
T PRK06176 192 SGTKYLGGHSDVVAGLVTTNNE 213 (380)
T ss_pred cCceeccCCccceeeEEEecHH
Confidence 9999999875 588887653
No 162
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.75 E-value=1.9e-17 Score=149.95 Aligned_cols=196 Identities=19% Similarity=0.196 Sum_probs=137.1
Q ss_pred cCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-
Q 022564 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP- 123 (295)
Q Consensus 47 ~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~- 123 (295)
+.|+|..++++ +++.+.+++.+.+.+.. ..|+. . ...+ +|+.++++++++++ +|++|+|++
T Consensus 25 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~-~~y~~------~-~~~~----lr~aia~~~~~~~~----~I~it~G~~~ 88 (353)
T PRK05387 25 KLIKLNTNENPYPPSPKVLEAIRAALGDDL-RLYPD------P-NADA----LRQAIAAYYGLDPE----QVFVGNGSDE 88 (353)
T ss_pred ceeeccCCCCCCCCCHHHHHHHHHHhhhhh-hcCCC------C-cHHH----HHHHHHHHhCCCHH----HEEEcCCHHH
Confidence 56899988874 47889999987765321 12322 1 2233 55888888899886 899999999
Q ss_pred HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcC
Q 022564 124 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGA 203 (295)
Q Consensus 124 a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~ 203 (295)
++..++.+++++||+|++++|.|+.+ ...+...|.++..++ .+ +++.+|++++++ +++++++++
T Consensus 89 al~~~~~~l~~~gd~vlv~~P~y~~~--------~~~~~~~g~~~~~v~--~~-~~~~~d~~~l~~-----~~~~v~~~~ 152 (353)
T PRK05387 89 VLAHAFLAFFNHDRPLLFPDITYSFY--------PVYAGLYGIPYEEIP--LD-DDFSIDVEDYLR-----PNGGIIFPN 152 (353)
T ss_pred HHHHHHHHhcCCCCEEEEeCCCHHHH--------HHHHHHcCCEEEEee--cC-CCCCCCHHHHHh-----cCCEEEEeC
Confidence 88778899999999999999655433 223345565554444 55 467899998863 467788876
Q ss_pred CCC--CCccCHHHHHHHHHHc-CCEEEEEccccccccccCCCCCCC---CcceEEEeCCCCCCC--CCceEEEEEeCCch
Q 022564 204 SAY--ARLYDYERIRKVCNKQ-KAIMLADMAHISGLVAAGVIPSPF---EYADVVTTTTHKSLR--GPRGAMIFFRKGVK 275 (295)
Q Consensus 204 ~n~--~~~~~l~~I~~ia~~~-~~~vivD~a~~~g~~~~~~~~~~~---~~~D~~~~s~~K~l~--gp~gG~l~~~~~~~ 275 (295)
||| |...+.+++.++++.+ ++++|+|+++.. +... ...++ ....+++.|++|.++ |.+-|+++.++++.
T Consensus 153 P~NPtG~~~~~~~~~~l~~~~~~~~livDe~y~~--~~~~-~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~~~~ 229 (353)
T PRK05387 153 PNAPTGIALPLAEIERILAANPDSVVVIDEAYVD--FGGE-SAIPLIDRYPNLLVVQTFSKSRSLAGLRVGFAIGHPELI 229 (353)
T ss_pred CCCCCCCCCCHHHHHHHHHhCCCcEEEEeCcccc--cCCc-chHHHHhhCCCEEEEEehhHhhcchhhhceeeecCHHHH
Confidence 666 4788999999999876 999999999742 1111 00011 124689999999874 55569999987765
Q ss_pred hh
Q 022564 276 EI 277 (295)
Q Consensus 276 ~~ 277 (295)
+.
T Consensus 230 ~~ 231 (353)
T PRK05387 230 EA 231 (353)
T ss_pred HH
Confidence 54
No 163
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.75 E-value=5.2e-17 Score=135.48 Aligned_cols=208 Identities=17% Similarity=0.222 Sum_probs=153.8
Q ss_pred HcCceecCCCC--CCCHHHHHHHhhhhhccCCCCCCCCcccC-Cc-c--hHHHHHHHHHHHHHHHcCCCCCCcceeEEeC
Q 022564 46 WKGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYG-GN-E--YIDMAESLCQKRALEAFRLDPEKWGVNVQSL 119 (295)
Q Consensus 46 ~~~i~L~~~~~--~~~~~v~~al~~~l~~~~~~g~~~~~~~~-~~-~--~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~ 119 (295)
++.||+++=+. ..++++++++.+ |.+||.-..+-. +. . ..+.+.+ ..+.+++++|+| .+.+|
T Consensus 15 r~~iNv~PiQrGGiLt~eArkal~E-----~gDGYSvCD~C~~Grldei~kPpI~~-F~~dlaeFlg~D------~~R~t 82 (382)
T COG1103 15 RGFINVNPIQRGGILTEEARKALLE-----WGDGYSVCDFCLEGRLDEITKPPIKD-FLEDLAEFLGMD------EVRVT 82 (382)
T ss_pred cCccccChhhccCcCCHHHHHHHHH-----hcCCcchhhhhccCccccccCCcHHH-HHHHHHHHhCCc------eeeec
Confidence 46788865543 578999999876 344443322221 00 0 0112222 225599999998 58899
Q ss_pred CChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhh-----
Q 022564 120 SGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL----- 193 (295)
Q Consensus 120 sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~----- 193 (295)
.|+- +-.+++.+++++||-|++....|.+.+- +++.+|+.+..+| .....++.+++|...+.|++
T Consensus 83 ~GARe~KfavMhal~~~gd~vV~D~~aHYttyv--------AAEragl~v~eVp-~tg~Pey~i~~e~y~~viee~~~~~ 153 (382)
T COG1103 83 AGAREAKFAVMHALCKEGDWVVVDSLAHYTTYV--------AAERAGLNVAEVP-NTGYPEYKITPEGYAEVIEEVKDEG 153 (382)
T ss_pred ccchhhHHHHHHHhccCCCEEEEcCcchHHHHH--------HHHhcCCeEEecC-CCCCCceEecHHHHHHHHHHHHhcc
Confidence 9999 8888999999999999988877765543 3446776676676 33445678999988887753
Q ss_pred -cCCcEEEEc--CCCCCCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCce-EEEE
Q 022564 194 -FRPKLIVAG--ASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIF 269 (295)
Q Consensus 194 -~~tk~i~l~--~~n~~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~l~ 269 (295)
..+.+.+++ ..++|.+.|.+.++++|+++|++++..+|...|-++......+ +||+++|+||.+.+... |++.
T Consensus 154 g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~gvPlllN~AYt~Grmpvs~ke~g---~DFiVgSGHKsmAAs~PiGvl~ 230 (382)
T COG1103 154 GDPPALALLTHVDGEYGNLADAKKVAKICREYGVPLLLNCAYTVGRMPVSGKEIG---ADFIVGSGHKSMAASAPIGVLA 230 (382)
T ss_pred CCCceEEEEeccCCCcCCchhhHHHHHHHHHcCCceEeecceeeccccccccccC---CCEEEecCccchhccCCeeEEe
Confidence 135666675 6777899999999999999999999999999999988776666 99999999999876555 9999
Q ss_pred EeCCchhh
Q 022564 270 FRKGVKEI 277 (295)
Q Consensus 270 ~~~~~~~~ 277 (295)
.+.++.+.
T Consensus 231 ~~eE~ae~ 238 (382)
T COG1103 231 MSEEWAEI 238 (382)
T ss_pred ehhHHHHH
Confidence 99988764
No 164
>PRK10534 L-threonine aldolase; Provisional
Probab=99.75 E-value=1.5e-17 Score=149.44 Aligned_cols=204 Identities=15% Similarity=0.190 Sum_probs=131.2
Q ss_pred ceecCCCCC-CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHH
Q 022564 49 LELIPSENF-TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQ 127 (295)
Q Consensus 49 i~L~~~~~~-~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~ 127 (295)
|+|..++++ ++|.+++++.+...... .|++.....+++ +.+++++|+++ .+++++|+.++..
T Consensus 2 ~~~~~~~~~~p~~~~~~a~~~~~~~~~--------~Y~~~~~~~~L~----~~la~~~g~~~-----~~v~~~g~~a~~~ 64 (333)
T PRK10534 2 IDLRSDTVTRPSRAMLEAMMAAPVGDD--------VYGDDPTVNALQ----DYAAELSGKEA-----ALFLPTGTQANLV 64 (333)
T ss_pred cccccccCCCCCHHHHHHHHhccCCCc--------ccCCCHHHHHHH----HHHHHHhCCCe-----EEEeCchHHHHHH
Confidence 466666664 68889999876443311 133323444455 78888899876 4666666667666
Q ss_pred HHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhc-----CCcEEEEc
Q 022564 128 VYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF-----RPKLIVAG 202 (295)
Q Consensus 128 ~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~-----~tk~i~l~ 202 (295)
++.+++.+||+|+++.+.|...+... ++...+ ....++++.+ +++.+|++++++++++. ++++|++|
T Consensus 65 ~l~~~~~~gd~vi~~~~~~~~~~~~~------~~~~~~-~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~ 136 (333)
T PRK10534 65 ALLSHCERGEEYIVGQAAHNYLYEAG------GAAVLG-SIQPQPIDAA-ADGTLPLDKVAAKIKPDDIHFARTRLLSLE 136 (333)
T ss_pred HHHHhcCCCCeeEEechhhhhHhcCC------chHHhc-CceEEeecCC-CCCCCCHHHHHHhhcccCcCcccceEEEEe
Confidence 77788999999998875553221110 111222 1233444455 56899999999998642 58899998
Q ss_pred CCCCCCccCHH---HHHHHHHHcCCEEEEEcccccccccc-CCCCCCC-CcceEEEeCCCCCCCCCceEEEEEeCCchhh
Q 022564 203 ASAYARLYDYE---RIRKVCNKQKAIMLADMAHISGLVAA-GVIPSPF-EYADVVTTTTHKSLRGPRGAMIFFRKGVKEI 277 (295)
Q Consensus 203 ~~n~~~~~~l~---~I~~ia~~~~~~vivD~a~~~g~~~~-~~~~~~~-~~~D~~~~s~~K~l~gp~gG~l~~~~~~~~~ 277 (295)
++++|...+.+ +|.++|++|++++++|+|+..+.... +.....+ .+.|.++.|++|.++.+.||++++++++.+.
T Consensus 137 np~~G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~~~~~~~~~~~~~s~SK~~~~~~G~~~~~~~~~i~~ 216 (333)
T PRK10534 137 NTHNGKVLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYGCELKEITQYCDSFTICLSKGLGTPVGSLLVGNRDYIKR 216 (333)
T ss_pred cCCCCeecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCCHHHHHhcCCEEEEEeEcCCCCcccceEEcCHHHHHH
Confidence 77778666655 55678899999999999976443211 1110000 1256666789998887777788888776543
No 165
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.75 E-value=1.5e-16 Score=146.25 Aligned_cols=206 Identities=14% Similarity=0.136 Sum_probs=135.1
Q ss_pred cCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcC--CCCCCcceeEEeCCCh
Q 022564 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR--LDPEKWGVNVQSLSGS 122 (295)
Q Consensus 47 ~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g--~~~~~~~~~v~~~sG~ 122 (295)
+.++|..+++. +++.+.+++.+...... + |+...+..++++++.+++.+ .| ++++ +|++|+|+
T Consensus 31 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~--~------Y~~~~g~~~lr~~ia~~~~~-~~~~~~~~----~i~~t~G~ 97 (397)
T PRK07568 31 KVYHLNIGQPDIKTPEVFFEAIKNYDEEVL--A------YSHSQGIPELREAFAKYYKK-WGIDVEPD----EILITNGG 97 (397)
T ss_pred CEEEecCCCCCCCCCHHHHHHHHHHhcCCc--C------cCCCCCCHHHHHHHHHHHHH-hCCCCCcc----eEEEcCCh
Confidence 46788887773 57888888876543211 2 33445567777766666653 33 4665 89999999
Q ss_pred H-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCC-CCCC-CCHHHHHHHHhhcCCcEE
Q 022564 123 P-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE-STGY-IDYDQLEKSATLFRPKLI 199 (295)
Q Consensus 123 ~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~-id~e~l~~~i~~~~tk~i 199 (295)
+ ++..++.+++++||+|+++++.|+.+.. .+...|..+..++ .+. +++. .|++++++++++ ++++|
T Consensus 98 ~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~--------~~~~~g~~~~~v~--~~~~~g~~~~~~~~l~~~~~~-~~~~v 166 (397)
T PRK07568 98 SEAILFAMMAICDPGDEILVPEPFYANYNG--------FATSAGVKIVPVT--TKIEEGFHLPSKEEIEKLITP-KTKAI 166 (397)
T ss_pred HHHHHHHHHHhcCCCCEEEEecCCCccHHH--------HHHHcCCEEEEee--cCcccCCCCCCHHHHHHhcCc-cceEE
Confidence 9 7777888889999999999965554322 2234565454444 432 2333 468999999876 89999
Q ss_pred EEcCCCCC--Ccc---CHHHHHHHHHHcCCEEEEEccccccccccCCCCC--CCC---cceEEEeCCCCCCC--CCceEE
Q 022564 200 VAGASAYA--RLY---DYERIRKVCNKQKAIMLADMAHISGLVAAGVIPS--PFE---YADVVTTTTHKSLR--GPRGAM 267 (295)
Q Consensus 200 ~l~~~n~~--~~~---~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~--~~~---~~D~~~~s~~K~l~--gp~gG~ 267 (295)
+++.++|| ... ++++|+++|+++|+++|+|+++..-......... .+. ..-+++.|++|.|+ |.+.|+
T Consensus 167 ~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~ 246 (397)
T PRK07568 167 LISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSACGARIGC 246 (397)
T ss_pred EEECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchhhccCCCcceEE
Confidence 88755553 333 5789999999999999999996532211111111 111 12378899999885 445599
Q ss_pred EEEe-CCchh
Q 022564 268 IFFR-KGVKE 276 (295)
Q Consensus 268 l~~~-~~~~~ 276 (295)
+++. +++.+
T Consensus 247 ~~~~~~~~~~ 256 (397)
T PRK07568 247 LISKNKELIA 256 (397)
T ss_pred EecCCHHHHH
Confidence 9885 44443
No 166
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.75 E-value=2.2e-17 Score=155.38 Aligned_cols=177 Identities=17% Similarity=0.150 Sum_probs=124.0
Q ss_pred CcchHHHHHHHHHHHHHHHcCCCCC----Cc-----ceeEEeCCChH-HHHHHHHhh----cC-----------------
Q 022564 86 GNEYIDMAESLCQKRALEAFRLDPE----KW-----GVNVQSLSGSP-SNFQVYTAL----LK----------------- 134 (295)
Q Consensus 86 ~~~~~~~l~~~~~~~la~~~g~~~~----~~-----~~~v~~~sG~~-a~~~~~~al----~~----------------- 134 (295)
.++...++|+.+.+|++++++..++ .| ...-++++|++ +|+.++.+. +.
T Consensus 123 ~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~ 202 (522)
T TIGR03799 123 TSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAAL 202 (522)
T ss_pred cCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhh
Confidence 4456678999999999999853111 00 01356678888 777655442 11
Q ss_pred -----CCCeEEEecCCCCcccCcccccccccccccee---eeEEEeeecCCCCCCCCHHHHHHHHhh---cCCcEEEEc-
Q 022564 135 -----PHDRIMALDLPHGGHLSHGYQTDTKKISAVSI---FFETMPYRLNESTGYIDYDQLEKSATL---FRPKLIVAG- 202 (295)
Q Consensus 135 -----~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~id~e~l~~~i~~---~~tk~i~l~- 202 (295)
++..|++++.+|.++.. .+.+.|. .+..+| ++ +++.+|+++|++++++ .+++.+.++
T Consensus 203 ~~~~~~~~~v~~S~~~H~S~~k--------aa~~lglg~~~v~~vp--~d-~~g~~d~~~L~~~i~~~~~~g~~~~~vva 271 (522)
T TIGR03799 203 KHYGYDGLAILVSERGHYSLGK--------AADVLGIGRDNLIAIK--TD-ANNRIDVDALRDKCAELAEQNIKPLAIVG 271 (522)
T ss_pred hhccCCceEEEECCCchHHHHH--------HHHHcCCCcccEEEEE--eC-CCCcCCHHHHHHHHHHHHHCCCCcEEEEE
Confidence 23468888888888753 2234443 344454 55 5789999999999863 255555442
Q ss_pred ---CCCCCCccCHHHHHHHHHHcCCEEEEEccccccccccCCCC---CCCCcceEEEeCCCCCCCCCce-EEEEEeCC
Q 022564 203 ---ASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIP---SPFEYADVVTTTTHKSLRGPRG-AMIFFRKG 273 (295)
Q Consensus 203 ---~~n~~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~---~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~ 273 (295)
.+..|.+.|+++|+++|+++|+|+++|+||+.+.+..+... .++.++|++++|+|||+++|.| |++++|++
T Consensus 272 taGtt~tGaiDpl~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle~aDSit~d~HK~l~~P~g~G~llvr~~ 349 (522)
T TIGR03799 272 VAGTTETGNIDPLDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIERADSVTIDAHKQLYVPMGAGMVLFKDP 349 (522)
T ss_pred EecCcCCCCcCCHHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCchhCCEEEEChhhcCCcCcccEEEEEeCH
Confidence 33447999999999999999999999999987766544211 1223599999999999999999 99999875
No 167
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.74 E-value=5.5e-17 Score=148.80 Aligned_cols=196 Identities=16% Similarity=0.164 Sum_probs=135.6
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCc-ccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCC
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGAR-YYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPH 136 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~-~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~g 136 (295)
..|++++++.+.+.. |..++.+++ +|+......++| +.+++++|.+. .+++++|.+++.+++.+++++|
T Consensus 13 ~~~~~~~~~~~a~~~-~g~~~~~sr~~yg~~~~~~~LE----~~lA~~~g~e~-----al~~~sG~~a~~~~i~~l~~~G 82 (392)
T PLN03227 13 SSPTLRQTALESLSH-YGCGSCGPRGFYGTIDAHLELE----QCMAEFLGTES-----AILYSDGASTTSSTVAAFAKRG 82 (392)
T ss_pred CCHHHHHHHHHHHHH-hCCCCcccccccCChHHHHHHH----HHHHHHhCCCc-----EEEecCcHHHHHHHHHHhCCCC
Confidence 478899999998866 655555543 455444444444 88999999874 7999999997778899999999
Q ss_pred CeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhh----------cCCcEEEEc-CCC
Q 022564 137 DRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL----------FRPKLIVAG-ASA 205 (295)
Q Consensus 137 d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~----------~~tk~i~l~-~~n 205 (295)
|+|++.+..|++.... +.+.+..+ ..++.. + .-|++.+.+.+.+ .++++|++. ..|
T Consensus 83 D~Vl~~~~~h~s~~~~--------~~l~~~~~--~~~~~~--d-~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~ 149 (392)
T PLN03227 83 DLLVVDRGVNEALLVG--------VSLSRANV--RWFRHN--D-MKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYK 149 (392)
T ss_pred CEEEEeccccHHHHHH--------HHHcCCeE--EEeCCC--C-HHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcC
Confidence 9999999888776432 22333323 322221 1 1133443334431 257788886 333
Q ss_pred C-CCccCHHHHHHHHHHcCCEEEEEcccccccccc---CC-C---CCCCCcceEEEeCCCCCCCCCceEEEEEeCCchhh
Q 022564 206 Y-ARLYDYERIRKVCNKQKAIMLADMAHISGLVAA---GV-I---PSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEI 277 (295)
Q Consensus 206 ~-~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~---~~-~---~~~~~~~D~~~~s~~K~l~gp~gG~l~~~~~~~~~ 277 (295)
+ |...|+++|.++|++||+++|+|++|+.|.... +. . ..|..++|++++|.+|++ ||.||++++++++.+.
T Consensus 150 ~~G~i~~l~~i~~l~~~~g~~livDe~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~-g~~gg~v~~~~~~~~~ 228 (392)
T PLN03227 150 NTGTLAPLKELVALKEEFHYRLILDESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAF-GSVGGMTVGSEEVVDH 228 (392)
T ss_pred CCCcccCHHHHHHHHHHcCCEEEEECcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhh-hccCcEEecCHHHHHH
Confidence 3 588899999999999999999999998665432 10 0 012235899999999975 6999999988876543
No 168
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.74 E-value=1.5e-17 Score=152.05 Aligned_cols=157 Identities=17% Similarity=0.218 Sum_probs=115.9
Q ss_pred HHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecC
Q 022564 97 CQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 176 (295)
Q Consensus 97 ~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 176 (295)
+++.+++++|++. .+++.+|+.++.+++.+++++||+|+++.+.|++.+.... ..+...|..+..+ +.
T Consensus 59 le~~la~l~g~~~-----~~~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~~~~t~~~~~----~~~~~~g~~v~~v--~~- 126 (380)
T TIGR01325 59 FEERIAALEGAER-----AVATATGMSAIQAALMTLLQAGDHVVASRSLFGSTVGFIS----EILPRFGIEVSFV--DP- 126 (380)
T ss_pred HHHHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEecCCcchHHHHHH----HHHHHhCCEEEEE--CC-
Confidence 4488888999854 5677777778887888999999999998877766533221 1122344434333 22
Q ss_pred CCCCCCCHHHHHHHHhhcCCcEEEEcCCCC--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCC-cceEEE
Q 022564 177 ESTGYIDYDQLEKSATLFRPKLIVAGASAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE-YADVVT 253 (295)
Q Consensus 177 ~~~~~id~e~l~~~i~~~~tk~i~l~~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~-~~D~~~ 253 (295)
.|++++++++++ ++++|+++.++| +...|+++|.++|+++|+++++|++++.+.... ++. ++|+++
T Consensus 127 -----~d~~~l~~~i~~-~tklV~le~p~np~g~~~dl~~I~~la~~~gi~livD~a~~~~~~~~-----pl~~g~Divv 195 (380)
T TIGR01325 127 -----TDLNAWEAAVKP-NTKLVFVETPSNPLGELVDIAALAELAHAIGALLVVDNVFATPVLQQ-----PLKLGADVVV 195 (380)
T ss_pred -----CCHHHHHHhcCC-CceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccCC-----chhhCCCEEE
Confidence 278999999876 899999975555 478899999999999999999999987553322 222 599999
Q ss_pred eCCCCCCCCCc---eEEEEEeCCchh
Q 022564 254 TTTHKSLRGPR---GAMIFFRKGVKE 276 (295)
Q Consensus 254 ~s~~K~l~gp~---gG~l~~~~~~~~ 276 (295)
.|++|+++|+. ||++++++++.+
T Consensus 196 ~S~sK~l~g~g~~~gG~vv~~~~~~~ 221 (380)
T TIGR01325 196 YSATKHIDGQGRVMGGVIAGSEELMA 221 (380)
T ss_pred eeccceecCCCCeEEEEEEeCHHHHH
Confidence 99999998863 588888877544
No 169
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.74 E-value=2.6e-17 Score=149.95 Aligned_cols=157 Identities=20% Similarity=0.232 Sum_probs=117.5
Q ss_pred HHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecC
Q 022564 97 CQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 176 (295)
Q Consensus 97 ~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 176 (295)
+++.+++++|.+. .+++++|+.|+..++.+++++||+|+++.+.|++....... .+...|..+..+ +.+
T Consensus 45 le~~la~l~g~~~-----a~~~~sG~~Ai~~~l~~l~~~gd~Vl~~~~~y~~~~~~~~~----~~~~~g~~~~~v--~~~ 113 (369)
T cd00614 45 LEKKLAALEGGEA-----ALAFSSGMAAISTVLLALLKAGDHVVASDDLYGGTYRLFER----LLPKLGIEVTFV--DPD 113 (369)
T ss_pred HHHHHHHHHCCCC-----EEEEcCHHHHHHHHHHHHcCCCCEEEECCCCcchHHHHHHH----HHhhcCeEEEEe--CCC
Confidence 4478888888764 68888887788889999999999999999887776432211 112344333333 222
Q ss_pred CCCCCCCHHHHHHHHhhcCCcEEEEcCCCC--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCC-cceEEE
Q 022564 177 ESTGYIDYDQLEKSATLFRPKLIVAGASAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE-YADVVT 253 (295)
Q Consensus 177 ~~~~~id~e~l~~~i~~~~tk~i~l~~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~-~~D~~~ 253 (295)
|++++++++++ ++++|++..++| +...|+++|.++|++||+++++|++|+.+... .++. ++|+++
T Consensus 114 ------d~~~l~~~i~~-~~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~livD~t~~~~~~~-----~~~~~g~Divv 181 (369)
T cd00614 114 ------DPEALEAAIKP-ETKLVYVESPTNPTLKVVDIEAIAELAHEHGALLVVDNTFATPYLQ-----RPLELGADIVV 181 (369)
T ss_pred ------CHHHHHHhcCC-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcchhcC-----ChhhhCCcEEE
Confidence 68999999976 899999974444 47889999999999999999999998876542 1222 599999
Q ss_pred eCCCCCCCCCc---eEEEEEeC-Cchh
Q 022564 254 TTTHKSLRGPR---GAMIFFRK-GVKE 276 (295)
Q Consensus 254 ~s~~K~l~gp~---gG~l~~~~-~~~~ 276 (295)
.|++|+++|+. ||++++++ ++.+
T Consensus 182 ~S~tK~l~g~~~~~gG~v~~~~~~l~~ 208 (369)
T cd00614 182 HSATKYIGGHSDVIAGVVVGSGEALIQ 208 (369)
T ss_pred eccceeccCCCCceEEEEEeCcHHHHH
Confidence 99999998764 69999987 5443
No 170
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.74 E-value=3.3e-17 Score=148.61 Aligned_cols=203 Identities=15% Similarity=0.108 Sum_probs=140.1
Q ss_pred cCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-
Q 022564 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP- 123 (295)
Q Consensus 47 ~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~- 123 (295)
+.++|+.++|+ +|+.+++++.+.+......+|+. ....+ +|+.+++++|.+.++ +|++|+|++
T Consensus 27 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-------~~~~~----lr~~ia~~~~~~~~~---~I~~t~G~~~ 92 (356)
T PRK04870 27 GMVKLDAMENPYRLPAELRAELGERLAEVALNRYPD-------PRAAA----LKAALRAAMGVPAGA---DVLLGNGSDE 92 (356)
T ss_pred CceeCcCCCCCCCCCHHHHHHHHHHhhccccccCCC-------CCHHH----HHHHHHHHhCcCCCC---cEEEcCCHHH
Confidence 57889888884 68999999998775311112322 12233 447778888886532 799999999
Q ss_pred HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcC
Q 022564 124 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGA 203 (295)
Q Consensus 124 a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~ 203 (295)
++..++.+++++||+|++++|.|..+ ...+...|.++..+ +++ +++.+|++++++.+...++++|+++.
T Consensus 93 ~i~~~~~~~~~~gd~vlv~~P~y~~~--------~~~~~~~g~~~~~i--~~~-~~~~~d~~~l~~~~~~~~~~~v~l~~ 161 (356)
T PRK04870 93 LIQLLALACAKPGATVLAPEPGFVMY--------RMSAKLAGLEFVGV--PLT-ADFTLDLPAMLAAIAEHRPALVFLAY 161 (356)
T ss_pred HHHHHHHHhcCCCCEEEECCCCHHHH--------HHHHHHcCCEEEEe--cCC-CCCCCCHHHHHHHhhcCCCCEEEEcC
Confidence 77767888899999999999544443 33445667555444 455 46789999999999755899999985
Q ss_pred CCCC--CccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCC--cceEEEeCCCCCCC--CCceEEEEEeCCchhh
Q 022564 204 SAYA--RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE--YADVVTTTTHKSLR--GPRGAMIFFRKGVKEI 277 (295)
Q Consensus 204 ~n~~--~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~--~~D~~~~s~~K~l~--gp~gG~l~~~~~~~~~ 277 (295)
+||| ...+.+++.++++..++++|+|+++..- ......+ .+. ..-+++.|++| ++ |.+-|++++++++.+.
T Consensus 162 p~NPtG~~~~~~~~~~i~~~~~~~ii~De~y~~~-~~~~~~~-~~~~~~~vi~~~S~SK-~~~~GlRiG~~i~~~~~i~~ 238 (356)
T PRK04870 162 PNNPTGNLFDDADVERIIEAAPGLVVVDEAYQPF-AGDSWLP-RLARFPNLLVMRTVSK-LGLAGLRLGYLAGHPAWIAE 238 (356)
T ss_pred CCCCCCCCCCHHHHHHHHHHCCCEEEEECCchhh-cCcchHH-HHhhCCCEEEEecchh-hhhHHHhhhhhhCCHHHHHH
Confidence 6664 7788888888887768999999996421 1111100 011 13478999999 53 3345999998776543
No 171
>PRK09105 putative aminotransferase; Provisional
Probab=99.74 E-value=3.5e-17 Score=149.11 Aligned_cols=199 Identities=16% Similarity=0.086 Sum_probs=137.0
Q ss_pred cCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-
Q 022564 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP- 123 (295)
Q Consensus 47 ~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~- 123 (295)
+.++|+.++++ +|+.+.+++.+.+.... . |+... ..+ +|+.+++++|++++ +|++|+|++
T Consensus 44 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~--~------Y~~~~-~~~----Lr~aia~~~~v~~e----~I~it~Gs~~ 106 (370)
T PRK09105 44 GAVFLNANECPLGPSPAARDAAARSAALSG--R------YDLEL-EDD----LRTLFAAQEGLPAD----HVMAYAGSSE 106 (370)
T ss_pred CcEEecCCCCCCCCCHHHHHHHHHHHHHhc--C------CCCch-HHH----HHHHHHHHhCcChh----hEEEcCChHH
Confidence 45888888873 68899999988764311 1 22211 333 45777888899887 899999999
Q ss_pred HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcC
Q 022564 124 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGA 203 (295)
Q Consensus 124 a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~ 203 (295)
++..++.+++++||+|++++|.|+.+. ..+...|.++..++ .+ +++.+|++++++. .+ +++++++++
T Consensus 107 ai~~~~~~l~~~gd~Vli~~P~y~~~~--------~~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~-~~-~~~~v~l~n 173 (370)
T PRK09105 107 PLNYAVLAFTSPTAGLVTADPTYEAGW--------RAADAQGAPVAKVP--LR-ADGAHDVKAMLAA-DP-NAGLIYICN 173 (370)
T ss_pred HHHHHHHHHcCCCCEEEEeCCChHHHH--------HHHHHcCCeEEEec--CC-CCCCCCHHHHHhc-CC-CCCEEEEeC
Confidence 888788899999999999996555553 23445675555454 44 4578999999876 34 789999986
Q ss_pred CCCC--CccCHHHHHHHHHH--cCCEEEEEccccccccccCCCCCCC--Ccce-EEEeCCCCCCC--CCceEEEEEeCCc
Q 022564 204 SAYA--RLYDYERIRKVCNK--QKAIMLADMAHISGLVAAGVIPSPF--EYAD-VVTTTTHKSLR--GPRGAMIFFRKGV 274 (295)
Q Consensus 204 ~n~~--~~~~l~~I~~ia~~--~~~~vivD~a~~~g~~~~~~~~~~~--~~~D-~~~~s~~K~l~--gp~gG~l~~~~~~ 274 (295)
|||| ...+.++|.++++. +++++|+|+++.. ... ......+ ...+ +++.|++|+++ |.+-|++++++++
T Consensus 174 P~NPTG~~~~~~~l~~l~~~~~~~~~lIvDEaY~~-f~~-~~s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~~~ 251 (370)
T PRK09105 174 PNNPTGTVTPRADIEWLLANKPAGSVLLVDEAYIH-FSD-APSVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAARPDL 251 (370)
T ss_pred CCCCCCcCcCHHHHHHHHHhCCCCcEEEEECchHH-hcc-CcchHHHHhhCCCEEEEecccHhhcCCccceeeeecCHHH
Confidence 6664 67777888777654 4899999999742 111 1000000 0123 66789999874 3345999998876
Q ss_pred hhh
Q 022564 275 KEI 277 (295)
Q Consensus 275 ~~~ 277 (295)
.+.
T Consensus 252 i~~ 254 (370)
T PRK09105 252 LAK 254 (370)
T ss_pred HHH
Confidence 553
No 172
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.74 E-value=4.4e-17 Score=150.72 Aligned_cols=154 Identities=16% Similarity=0.115 Sum_probs=113.5
Q ss_pred HHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecC
Q 022564 97 CQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 176 (295)
Q Consensus 97 ~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 176 (295)
+++.++++.|.+. .+++++|+.|+.+++.+++++||+|+++.+.|++.+..+.. .+...|.++ +.++.
T Consensus 69 Le~~lA~leg~~~-----al~~~sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~~~~----~~~~~Gv~v--~~vd~- 136 (431)
T PRK08248 69 FEKRIAALEGGIG-----ALAVSSGQAAITYSILNIASAGDEIVSSSSLYGGTYNLFAH----TLPKLGITV--KFVDP- 136 (431)
T ss_pred HHHHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEccCchhhHHHHHHH----HHHhCCEEE--EEECC-
Confidence 4488889999764 78888888888878889999999999999888766433221 122345444 33332
Q ss_pred CCCCCCCHHHHHHHHhhcCCcEEEEcCCCC--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEe
Q 022564 177 ESTGYIDYDQLEKSATLFRPKLIVAGASAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTT 254 (295)
Q Consensus 177 ~~~~~id~e~l~~~i~~~~tk~i~l~~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~ 254 (295)
.|++++++++++ ++++|+++.++| +...|+++|.++|+++|+++|+|++++.+.....+ .. ++|+++.
T Consensus 137 -----~d~e~l~~ai~~-~tklV~l~sp~NPtG~v~di~~I~~la~~~gi~vIvD~t~a~~~~~~pl-~~---gaDivv~ 206 (431)
T PRK08248 137 -----SDPENFEAAITD-KTKALFAETIGNPKGDVLDIEAVAAIAHEHGIPLIVDNTFASPYLLRPI-EH---GADIVVH 206 (431)
T ss_pred -----CCHHHHHHhcCC-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEeCCCCccccCChh-Hc---CCCEEEE
Confidence 389999999987 899999974444 48889999999999999999999998754322211 12 5999999
Q ss_pred CCCCCCCCCce---EEEEEeC
Q 022564 255 TTHKSLRGPRG---AMIFFRK 272 (295)
Q Consensus 255 s~~K~l~gp~g---G~l~~~~ 272 (295)
|+||+++||.. |++..+.
T Consensus 207 S~tK~lgg~g~~~Gg~v~~~~ 227 (431)
T PRK08248 207 SATKFIGGHGTSIGGVIVDSG 227 (431)
T ss_pred cCccccCCCCCceEEEEEeCC
Confidence 99999988763 5454444
No 173
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.74 E-value=4.3e-17 Score=150.02 Aligned_cols=160 Identities=14% Similarity=0.157 Sum_probs=118.1
Q ss_pred chHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceee
Q 022564 88 EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIF 167 (295)
Q Consensus 88 ~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~ 167 (295)
+....+| +.++++.|... .+.+.||+.|+.+++.+++++||+|+++.+.|++....... .+...|.+
T Consensus 61 Ptv~~lE----~~la~leg~~~-----av~~~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~----~l~~~Gi~ 127 (432)
T PRK06702 61 PTLAAFE----QKLAELEGGVG-----AVATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGV----SLRKLGID 127 (432)
T ss_pred cHHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHH----HHHHCCCE
Confidence 4455555 88888888876 68888888888888889999999999999877766443211 11234533
Q ss_pred eEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCC
Q 022564 168 FETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYA--RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP 245 (295)
Q Consensus 168 ~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~~--~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~ 245 (295)
+..+ + ..+|++++++++++ +||+|++..++|| .+.|+++|+++|+++|+++++|++.+.. ....|
T Consensus 128 v~~v----d---~~~d~~~l~~~I~~-~Tk~I~~e~pgnP~~~v~Di~~I~~iA~~~gi~livD~T~~tP-----~~~~p 194 (432)
T PRK06702 128 VTFF----N---PNLTADEIVALAND-KTKLVYAESLGNPAMNVLNFKEFSDAAKELEVPFIVDNTLATP-----YLCQA 194 (432)
T ss_pred EEEE----C---CCCCHHHHHHhCCc-CCeEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEECCCCch-----hhCCh
Confidence 3322 2 35799999999987 9999998744554 7889999999999999999999996422 22223
Q ss_pred CC-cceEEEeCCCCCCCCCce---EEEEEeCC
Q 022564 246 FE-YADVVTTTTHKSLRGPRG---AMIFFRKG 273 (295)
Q Consensus 246 ~~-~~D~~~~s~~K~l~gp~g---G~l~~~~~ 273 (295)
+. |+|+++.|.+|+++|..+ |+++.+..
T Consensus 195 l~~GADIvv~S~TKy~~Ghsd~l~G~v~~~~~ 226 (432)
T PRK06702 195 FEHGANIIVHSTTKYIDGHASSLGGIVIDGGN 226 (432)
T ss_pred hhcCCCEEEEccccccCCCcceeceEEEeCCC
Confidence 33 699999999999998766 55554443
No 174
>PRK08175 aminotransferase; Validated
Probab=99.74 E-value=2.2e-16 Score=145.16 Aligned_cols=212 Identities=15% Similarity=0.138 Sum_probs=140.4
Q ss_pred HcCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCC--CCCCcceeEEeCCC
Q 022564 46 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWGVNVQSLSG 121 (295)
Q Consensus 46 ~~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~--~~~~~~~~v~~~sG 121 (295)
.+.++|..+.+. +++.+.+++.+.+.+.. ...|+...+..++++++.+++.+.+|. +++. ++++|+|
T Consensus 29 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~------~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~---~i~~t~G 99 (395)
T PRK08175 29 EDIIDFSMGNPDGPTPPHIVEKLCEVAQRPD------THGYSTSRGIPRLRRAISRWYQDRYDVDIDPES---EAIVTIG 99 (395)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHhCCC------cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC---cEEEccC
Confidence 356788766543 45667777776554311 122455566788998888998887675 4432 6999999
Q ss_pred hH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhh--cCCcE
Q 022564 122 SP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL--FRPKL 198 (295)
Q Consensus 122 ~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~--~~tk~ 198 (295)
++ ++..++.++++|||+|++++|.|+.+.. .+...|.++..++ .+.+ ..+.++++++++. .++++
T Consensus 100 ~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~--------~~~~~g~~~~~v~--~~~~--~~~~~~l~~~l~~~~~~~~~ 167 (395)
T PRK08175 100 SKEGLAHLMLATLDHGDTVLVPNPSYPIHIY--------GAVIAGAQVRSVP--LVEG--VDFFNELERAIRESYPKPKM 167 (395)
T ss_pred cHHHHHHHHHHhCCCCCEEEEcCCCCcchHH--------HHHHcCCeEEEEe--cccC--CCcHHHHHHHHhhccCCceE
Confidence 98 7766788889999999999976665533 2234565454444 4422 2357888888863 27899
Q ss_pred EEEcCCCCC--CccCH---HHHHHHHHHcCCEEEEEccccccccccCCCCC--CCC---cceEEEeCCCCCCCCC--ceE
Q 022564 199 IVAGASAYA--RLYDY---ERIRKVCNKQKAIMLADMAHISGLVAAGVIPS--PFE---YADVVTTTTHKSLRGP--RGA 266 (295)
Q Consensus 199 i~l~~~n~~--~~~~l---~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~--~~~---~~D~~~~s~~K~l~gp--~gG 266 (295)
++++.+||| ...+. ++|.++|++||+++|+|+++............ .+. ...+++.|++|.|+.| +.|
T Consensus 168 v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG 247 (395)
T PRK08175 168 MILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIG 247 (395)
T ss_pred EEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCCcccCEEEEeeccccccCcchhhe
Confidence 998855553 55555 78999999999999999997543221111110 111 1336789999998544 349
Q ss_pred EEEEeCCchhhh
Q 022564 267 MIFFRKGVKEIN 278 (295)
Q Consensus 267 ~l~~~~~~~~~~ 278 (295)
+++.++++.+..
T Consensus 248 ~~~~~~~l~~~~ 259 (395)
T PRK08175 248 FMVGNPELVSAL 259 (395)
T ss_pred eeeCCHHHHHHH
Confidence 999988766543
No 175
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.74 E-value=4.2e-17 Score=148.68 Aligned_cols=154 Identities=14% Similarity=0.158 Sum_probs=113.4
Q ss_pred HHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeec
Q 022564 96 LCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL 175 (295)
Q Consensus 96 ~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 175 (295)
.+++.++++.|.+. .+++++|+.++. ++.+++++||+|+++++.|++.+..... .+...|.++..+ +
T Consensus 54 ~Le~~lA~l~g~~~-----~~~~~sG~aai~-~~~~~l~~Gd~Viv~~~~y~~~~~~~~~----~~~~~G~~v~~v--~- 120 (377)
T PRK07671 54 ALEELIAVLEGGHA-----GFAFGSGMAAIT-AVMMLFSSGDHVILTDDVYGGTYRVMTK----VLNRFGIEHTFV--D- 120 (377)
T ss_pred HHHHHHHHHhCCCc-----eEEeCCHHHHHH-HHHHHhCCCCEEEECCCccchHHHHHHH----HHhcCCeEEEEE--C-
Confidence 35588999999875 688999988766 3446789999999999877755432211 111234333333 2
Q ss_pred CCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCC-cceEE
Q 022564 176 NESTGYIDYDQLEKSATLFRPKLIVAGASAYA--RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE-YADVV 252 (295)
Q Consensus 176 ~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~~--~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~-~~D~~ 252 (295)
..|++++++++++ +||+|+++.|+|| ...|+++|.++|+++|+++++|++++.+.... ++. ++|++
T Consensus 121 -----~~d~~~l~~ai~~-~tklV~le~P~NPtg~~~dl~~I~~la~~~g~~lvvD~a~~~~~~~~-----p~~~g~Div 189 (377)
T PRK07671 121 -----TSNLEEVEEAIRP-NTKAIYVETPTNPLLKITDIKKISTIAKEKGLLTIVDNTFMTPYWQS-----PISLGADIV 189 (377)
T ss_pred -----CCCHHHHHHhcCC-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCCccccCC-----hhhhCCeEE
Confidence 2389999999987 8999999866554 78899999999999999999999976543321 222 58999
Q ss_pred EeCCCCCCCCCc---eEEEEEeCC
Q 022564 253 TTTTHKSLRGPR---GAMIFFRKG 273 (295)
Q Consensus 253 ~~s~~K~l~gp~---gG~l~~~~~ 273 (295)
++|++|+++||. +|+++++++
T Consensus 190 v~S~sK~l~G~~~~~~G~~v~~~~ 213 (377)
T PRK07671 190 LHSATKYLGGHSDVVAGLVVVNSP 213 (377)
T ss_pred EecCcccccCCccceeEEEEeCcH
Confidence 999999999985 477777653
No 176
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.74 E-value=1.5e-16 Score=146.88 Aligned_cols=207 Identities=12% Similarity=0.049 Sum_probs=134.4
Q ss_pred cCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcC--CCCCCcceeEEeCCCh
Q 022564 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR--LDPEKWGVNVQSLSGS 122 (295)
Q Consensus 47 ~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g--~~~~~~~~~v~~~sG~ 122 (295)
+.++|..+++. +++.+.+++.+.+.+... ......|+...+..++++++.+++.+..| ++++ +|++|+|+
T Consensus 35 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~----~I~it~Ga 108 (409)
T PRK07590 35 KIIRLGIGDVTQPLPPAVIEAMHKAVDEMGT--AETFRGYGPEQGYDFLREKIAENDYQARGCDISAD----EIFISDGA 108 (409)
T ss_pred ceEEecCcCCCCCCCHHHHHHHHHHHhcccc--cCCccCCCCCCCCHHHHHHHHHHHHHhcCCcCChh----hEEECCCH
Confidence 56899888874 578888988887754110 01112244556677888888888766665 4665 89999999
Q ss_pred H-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceee---------eEEEeeecCCC-CCCCCHHHHHHHH
Q 022564 123 P-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIF---------FETMPYRLNES-TGYIDYDQLEKSA 191 (295)
Q Consensus 123 ~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~---------~~~v~~~~~~~-~~~id~e~l~~~i 191 (295)
+ ++. ++..++++||+|++.+|.|+.+.. .+...|.. .++++++++.+ ++.+|+++
T Consensus 109 ~~al~-~l~~~~~~gd~V~v~~P~Y~~~~~--------~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~----- 174 (409)
T PRK07590 109 KCDTG-NILDIFGPDNTIAVTDPVYPVYVD--------TNVMAGRTGEANEDGRYSGIVYLPCTAENNFVPELPE----- 174 (409)
T ss_pred HHHHH-HHHHhcCCCCEEEEeCCCCcchHH--------HHHHcCCcccccccccccceeEeecccccCCcccCcc-----
Confidence 9 666 455678999999999966655543 33344433 01344445422 34444331
Q ss_pred hhcCCcEEEEcCCCCC-----CccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCC---CCc---ceEEEeCCCCCC
Q 022564 192 TLFRPKLIVAGASAYA-----RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP---FEY---ADVVTTTTHKSL 260 (295)
Q Consensus 192 ~~~~tk~i~l~~~n~~-----~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~---~~~---~D~~~~s~~K~l 260 (295)
.++|+|++++|||| ....+++|+++|++||++||+|+++..-... +....+ +.+ .-+++.|++|+|
T Consensus 175 --~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~-~~~~~~~~~~~~~~~~vi~~~SfSK~~ 251 (409)
T PRK07590 175 --EKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISD-PSLPHSIYEIEGARECAIEFRSFSKTA 251 (409)
T ss_pred --cCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccC-CCCCcchhhCCCcccceEEEecCcccc
Confidence 38999999866664 3445678888999999999999997632211 111111 111 236689999988
Q ss_pred C--CCceEEEEEeCCchh
Q 022564 261 R--GPRGAMIFFRKGVKE 276 (295)
Q Consensus 261 ~--gp~gG~l~~~~~~~~ 276 (295)
+ |.+-|++++.+++.+
T Consensus 252 ~~pGlRiG~~i~~~~li~ 269 (409)
T PRK07590 252 GFTGTRCAYTVVPKELKG 269 (409)
T ss_pred CCcCceeEEEEcCHHHhh
Confidence 4 445599999877654
No 177
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.74 E-value=6.1e-17 Score=151.24 Aligned_cols=169 Identities=17% Similarity=0.137 Sum_probs=124.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhh-cCCCCeEEEecCCCCcccCccccccccccccceeee
Q 022564 91 DMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTAL-LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFF 168 (295)
Q Consensus 91 ~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al-~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 168 (295)
.+...+.++++++++|++.+ ++.+++|++ ++.+++.++ ..+||+|+++++.|+++....... +...|.++
T Consensus 111 ~~~~~e~~~~la~l~g~~~~----~v~~~~g~t~~~~~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~----~~~~G~~~ 182 (447)
T PRK00451 111 LQAIFEYQTMICELTGMDVA----NASMYDGATALAEAALMAVRITKRKKVLVSGAVHPEYREVLKTY----LKGQGIEV 182 (447)
T ss_pred HHHHHHHHHHHHHHhCCCcc----eEEecCcHHHHHHHHHHHHHhcCCCEEEEeCccCHHHHHHHHHH----HHhCCcEE
Confidence 33444455788999999876 899999999 666677777 489999999998888776543211 11245455
Q ss_pred EEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCC-CCccCHHHHHHHHHHcCCEEEE--EccccccccccCCCCCC
Q 022564 169 ETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY-ARLYDYERIRKVCNKQKAIMLA--DMAHISGLVAAGVIPSP 245 (295)
Q Consensus 169 ~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~-~~~~~l~~I~~ia~~~~~~viv--D~a~~~g~~~~~~~~~~ 245 (295)
..++ .+ ++ .+|++++++++++ +|++|+++.+|+ |...|+++|+++|+++|+++++ |.. +.|.+... ...
T Consensus 183 ~~v~--~~-~~-~~d~~~l~~~i~~-~t~~v~l~~pn~tG~v~~l~~I~~~a~~~~~~~iv~~d~~-~~g~~~~~-~~~- 254 (447)
T PRK00451 183 VEVP--YE-DG-VTDLEALEAAVDD-DTAAVVVQYPNFFGVIEDLEEIAEIAHAGGALFIVGVDPV-SLGLLKPP-GEY- 254 (447)
T ss_pred EEec--CC-CC-CCCHHHHHHhcCC-CeEEEEEECCCCCCeeCCHHHHHHHHHHCCCEEEEEcChH-HhccCCCc-ccC-
Confidence 4454 55 34 8999999999986 899999975555 6889999999999999999998 543 34433211 122
Q ss_pred CCcceEEEeCCCCC-----CCCCceEEEEEeCCchhh
Q 022564 246 FEYADVVTTTTHKS-----LRGPRGAMIFFRKGVKEI 277 (295)
Q Consensus 246 ~~~~D~~~~s~~K~-----l~gp~gG~l~~~~~~~~~ 277 (295)
++|++++++||| ++||+.|++++++++.+.
T Consensus 255 --~~D~~~~s~~k~~~~~~~~Gpg~G~l~~~~~~~~~ 289 (447)
T PRK00451 255 --GADIVVGEGQPLGIPLSFGGPYLGFFATRKKLVRQ 289 (447)
T ss_pred --CCCEEEECCCcCCCCCCCCCCCchHHHhhHHHHhh
Confidence 599999999996 678866999999887654
No 178
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.74 E-value=3.4e-17 Score=149.48 Aligned_cols=209 Identities=11% Similarity=0.020 Sum_probs=138.7
Q ss_pred cCceecCCCCC--CCHHHHHHHhhhhhccC-CCCCCCCcccCCcchHHHHHHHHHHHHHHHcC----CCCCCcceeEEeC
Q 022564 47 KGLELIPSENF--TSVSVMQAVGSVMTNKY-SEGYPGARYYGGNEYIDMAESLCQKRALEAFR----LDPEKWGVNVQSL 119 (295)
Q Consensus 47 ~~i~L~~~~~~--~~~~v~~al~~~l~~~~-~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g----~~~~~~~~~v~~~ 119 (295)
..++|..|+++ +|+.+++++.+.+.... ...|+ . .+..++++++.+++.+.++ ++++ +|++|
T Consensus 29 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~------~-~G~~~Lr~aia~~~~~~~~~~~~v~~~----~I~it 97 (374)
T PRK02610 29 QLDRLDTNEFPYDLPPDLKQKLAWLYQQGIESNRYP------D-GGHEALKQAIAEYVNESAAGSSQITPA----NISVG 97 (374)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHhhcccccCCC------C-CchHHHHHHHHHHhCccccccCCCCHH----HEEEc
Confidence 35788888885 68899999988765421 11222 2 3456777666666665542 6775 89999
Q ss_pred CChH-HHHHHHHhhcCCCC-eEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhh---c
Q 022564 120 SGSP-SNFQVYTALLKPHD-RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL---F 194 (295)
Q Consensus 120 sG~~-a~~~~~~al~~~gd-~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~---~ 194 (295)
+|++ ++..++.+++.+|| .|+++.|.|+ .+...++..|.++..+ +.+.+++.+|++++++++++ .
T Consensus 98 ~Ga~~al~~~~~~~~~~g~~~Vlv~~P~y~--------~~~~~~~~~g~~~~~~--~~~~~~~~~d~~~l~~~~~~~~~~ 167 (374)
T PRK02610 98 NGSDELIRSLLIATCLGGEGSILVAEPTFS--------MYGILAQTLGIPVVRV--GRDPETFEIDLAAAQSAIEQTQNP 167 (374)
T ss_pred CChHHHHHHHHHHHcCCCCCeEEEcCCChH--------HHHHHHHHcCCEEEEe--cCCcccCCCCHHHHHHHHHhhcCC
Confidence 9999 77667778888886 8999995444 4443445667555444 45544679999999998864 4
Q ss_pred CCcEEEEcCCCCC--CccCHHHHHHHHHH-cCCEEEEEccccccccccCCCCCCCCc--ceEEEeCCCCCCC--CCceEE
Q 022564 195 RPKLIVAGASAYA--RLYDYERIRKVCNK-QKAIMLADMAHISGLVAAGVIPSPFEY--ADVVTTTTHKSLR--GPRGAM 267 (295)
Q Consensus 195 ~tk~i~l~~~n~~--~~~~l~~I~~ia~~-~~~~vivD~a~~~g~~~~~~~~~~~~~--~D~~~~s~~K~l~--gp~gG~ 267 (295)
++|+|++++|||| ...+.+++.++++- ++++||+|+++..-. .... ...+.. .-+++.|++|+|+ |.+-|+
T Consensus 168 ~~k~i~l~~P~NPTG~~~s~~~l~~l~~~~~~~~iI~De~Y~~~~-~~~~-~~~~~~~~~~ivi~SfSK~~g~~GlRiG~ 245 (374)
T PRK02610 168 PVRVVFVVHPNSPTGNPLTAAELEWLRSLPEDILVVIDEAYFEFS-QTTL-VGELAQHPNWVILRTFSKAFRLAAHRVGY 245 (374)
T ss_pred CceEEEEeCCCCCCCCCCCHHHHHHHHhccCCcEEEEeccccccC-ccch-HHHHhcCCCEEEEEecchhccCcccceee
Confidence 8999999866774 55565555555431 489999999975321 1000 000111 2377899999884 555599
Q ss_pred EEEeCCchhhh
Q 022564 268 IFFRKGVKEIN 278 (295)
Q Consensus 268 l~~~~~~~~~~ 278 (295)
++.++++.+..
T Consensus 246 ~v~~~~l~~~l 256 (374)
T PRK02610 246 AIGHPELIAVL 256 (374)
T ss_pred eecCHHHHHHH
Confidence 99987765543
No 179
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.74 E-value=1.2e-16 Score=147.03 Aligned_cols=175 Identities=17% Similarity=0.132 Sum_probs=121.9
Q ss_pred chHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH--HHHHHHHhhc--C-CCCeEEEecCCCCcccCccccccccccc
Q 022564 88 EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP--SNFQVYTALL--K-PHDRIMALDLPHGGHLSHGYQTDTKKIS 162 (295)
Q Consensus 88 ~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~--a~~~~~~al~--~-~gd~Vl~~~~~~~~~~~~~~~~~~~~~~ 162 (295)
.....+.+.+.+++++++|++... ..++++|++ ++.+++.++- . +||+|+++...|.+... ++.
T Consensus 101 s~~~~l~~~~e~~~~~~~G~~~~~---~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~k--------Ai~ 169 (444)
T TIGR03531 101 SLLYKLTNKLVKDFLKLLGLRSIK---SAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIK--------AIS 169 (444)
T ss_pred cHHHHHHHHHHHHHHHHcCCCCCC---EEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHH--------HHH
Confidence 346678888889999999997321 344445555 5554555542 2 68999999977666654 445
Q ss_pred cceeeeEEEeeecCCCCCCCCHHHHHHHHhhc--CCcEEEEcCCCC-C--CccCHHHHHHHHHHcCCEEEEEcccccccc
Q 022564 163 AVSIFFETMPYRLNESTGYIDYDQLEKSATLF--RPKLIVAGASAY-A--RLYDYERIRKVCNKQKAIMLADMAHISGLV 237 (295)
Q Consensus 163 ~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~--~tk~i~l~~~n~-~--~~~~l~~I~~ia~~~~~~vivD~a~~~g~~ 237 (295)
..|++...++...+++++.+|++++++++++. ++.+++++.+++ + ...|+++|+++|++||+++|+|+||+.+..
T Consensus 170 ~~G~~pv~Vd~~~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~ 249 (444)
T TIGR03531 170 TAGFEPRVIETVLDGDELTTDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSN 249 (444)
T ss_pred HcCCeEEEeeeeecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcCh
Confidence 77876666653245567899999999999852 345555553333 2 689999999999999999999999987543
Q ss_pred ccC-CCCCCCC--cceEEEeCCCCCCCCCce-EEEEEeCC
Q 022564 238 AAG-VIPSPFE--YADVVTTTTHKSLRGPRG-AMIFFRKG 273 (295)
Q Consensus 238 ~~~-~~~~~~~--~~D~~~~s~~K~l~gp~g-G~l~~~~~ 273 (295)
... .....+. .+|++++|+||++..|.+ |+++++++
T Consensus 250 ~~~~~~~~g~~~Grad~vv~s~hK~l~~pg~Gg~I~~~d~ 289 (444)
T TIGR03531 250 KYMELINKAIKVGRVDAVVSSTDKNFMVPVGGAIIYSFDE 289 (444)
T ss_pred hhhhhhhccccccCCCeEEEeCccCCCCCCCEEEEEECCH
Confidence 321 1111111 379999999999988765 77778554
No 180
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.73 E-value=1.9e-17 Score=150.32 Aligned_cols=199 Identities=16% Similarity=0.080 Sum_probs=138.2
Q ss_pred cCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEe-CCChH
Q 022564 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQS-LSGSP 123 (295)
Q Consensus 47 ~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~-~sG~~ 123 (295)
+.|+|..++++ ++|.+++++.+.+.... +|+. ... .+ +++.+++++|++++ +|++ ++|++
T Consensus 35 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~--~y~~------~~~-~~----lr~~ia~~~~~~~~----~i~~~~~Ga~ 97 (361)
T PRK00950 35 SIIKLGSNENPLGPSPKAVEAIEKELSKIH--RYPE------PDA-PE----LREALSKYTGVPVE----NIIVGGDGMD 97 (361)
T ss_pred ceEEccCCCCCCCCCHHHHHHHHHHHHhhc--CCCC------CCH-HH----HHHHHHHHhCCCHH----HEEEeCCCHH
Confidence 56899888774 57888888887665311 2332 111 33 55788888899886 7888 78988
Q ss_pred -HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEc
Q 022564 124 -SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 202 (295)
Q Consensus 124 -a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~ 202 (295)
++..++.+++++||+|+++++.|+.+ ...+...|.++..++ .+ +++.+|++++++.+++ ++++++++
T Consensus 98 ~~i~~~~~~~~~~gd~vlv~~p~y~~~--------~~~~~~~g~~~~~~~--~~-~~~~~~~~~l~~~~~~-~~~~v~~~ 165 (361)
T PRK00950 98 EVIDTLMRTFIDPGDEVIIPTPTFSYY--------EISAKAHGAKPVYAK--RE-EDFSLDVDSVLNAITE-KTKVIFLC 165 (361)
T ss_pred HHHHHHHHHhcCCCCEEEEcCCChHHH--------HHHHHHcCCEEEEee--cC-CCCCcCHHHHHHHhcc-CCCEEEEe
Confidence 66667778889999999999654433 223345565554444 33 4578999999999876 89999987
Q ss_pred CCCC--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCC--cceEEEeCCCCCCCCC--ceEEEEEeCCchh
Q 022564 203 ASAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE--YADVVTTTTHKSLRGP--RGAMIFFRKGVKE 276 (295)
Q Consensus 203 ~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~--~~D~~~~s~~K~l~gp--~gG~l~~~~~~~~ 276 (295)
.++| |...+.++|.++|+++|+++|+|++|.... ....... .. ..-+++.|++|.++.| +-|++++++++.+
T Consensus 166 ~p~nptG~~~~~~~l~~l~~~~~~~li~De~y~~~~-~~~~~~~-~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~~~~~ 243 (361)
T PRK00950 166 TPNNPTGNLIPEEDIRKILESTDALVFVDEAYVEFA-EYDYTPL-ALEYDNLIIGRTFSKVFGLAGLRIGYGFVPEWLID 243 (361)
T ss_pred CCCCCCCCCcCHHHHHHHHHHCCcEEEEECchhhhC-ccchHHH-HHhcCCEEEEEeehHhhcCchhhcchhcCCHHHHH
Confidence 5555 488899999999999999999999985322 1111000 00 1236789999988533 3499998877654
No 181
>PRK06460 hypothetical protein; Provisional
Probab=99.73 E-value=2.7e-17 Score=149.95 Aligned_cols=158 Identities=18% Similarity=0.186 Sum_probs=113.6
Q ss_pred HHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecC
Q 022564 97 CQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 176 (295)
Q Consensus 97 ~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 176 (295)
+++.+++++|.+. .+++++|+.++..++.+++++||+|+++.+.|+..+.. +...+...|.++..++ .+
T Consensus 50 L~~~lA~l~g~~~-----~v~~~sG~~ai~~~l~al~~~Gd~Vl~~~~~~~~ty~~----~~~~~~~~G~~v~~~~--~~ 118 (376)
T PRK06460 50 LTKKIVELENAEM-----GVAFSSGMGAISTTALALLKPGNSVLVHRDMFGRSYRF----FTDYLKNWGVNVDASN--PG 118 (376)
T ss_pred HHHHHHHHhCCCc-----EEEeCCHHHHHHHHHHHHhCCCCEEEEecCCcCcHHHH----HHHHHHhhCcEEEEEC--CC
Confidence 4588999999875 68888888788878899999999999987666544322 2223334565443332 22
Q ss_pred CCCCCCCHHHHHHHHhhcCCcEEEEcCCCC--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEe
Q 022564 177 ESTGYIDYDQLEKSATLFRPKLIVAGASAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTT 254 (295)
Q Consensus 177 ~~~~~id~e~l~~~i~~~~tk~i~l~~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~ 254 (295)
+.+.+++.+++ +||+|+++.++| |...|+++|.++|+++|+++++|++++.+.. ..+.. .++|+++.
T Consensus 119 ------~~~~l~~~~~~-~tklV~l~sp~NPtG~v~d~~~I~~la~~~g~~vivDea~~~~~~---~~~l~-~~~divv~ 187 (376)
T PRK06460 119 ------SDNIIEKAKSK-RYDVVFVENITNPLLRVVDITELSKVCKENGSILIVDATFSTPIN---QKPLE-LGADIVVH 187 (376)
T ss_pred ------CHHHHHHhcCC-CceEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcCcccc---CChhh-cCCCEEEe
Confidence 23445555554 899999986666 4889999999999999999999999875421 11111 14899999
Q ss_pred CCCCCCCCCc---eEEEEEeCCchh
Q 022564 255 TTHKSLRGPR---GAMIFFRKGVKE 276 (295)
Q Consensus 255 s~~K~l~gp~---gG~l~~~~~~~~ 276 (295)
|++|+|+|++ +|+++.++++.+
T Consensus 188 S~sK~l~G~~~~~~G~~~~~~~l~~ 212 (376)
T PRK06460 188 SASKFLAGHNDVIAGLAAGYGKLLN 212 (376)
T ss_pred ecceeccCCCCceEEEEecCHHHHH
Confidence 9999998875 699888877544
No 182
>PLN02509 cystathionine beta-lyase
Probab=99.73 E-value=2.9e-17 Score=152.48 Aligned_cols=157 Identities=17% Similarity=0.182 Sum_probs=114.6
Q ss_pred HHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEee
Q 022564 94 ESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPY 173 (295)
Q Consensus 94 ~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 173 (295)
.++++++++++.|.+. .+.+++|..++. ++..++++||+|+++++.|+++...... .+...|..+..+
T Consensus 135 ~~aLE~~lA~leg~e~-----ai~~~SG~aAi~-~il~ll~~GD~VI~~~~~y~~t~~ll~~----~l~~~G~~v~~v-- 202 (464)
T PLN02509 135 RDALESLLAKLDKADR-----AFCFTSGMAALS-AVTHLIKNGEEIVAGDDVYGGSDRLLSQ----VVPRSGVVVKRV-- 202 (464)
T ss_pred HHHHHHHHHHHhCCCE-----EEEeCcHHHHHH-HHHHHhCCCCEEEEcCCchhhHHHHHHH----HHHHCCeEEEEe--
Confidence 4456688888888654 577777766655 4556799999999999887766432211 112335433322
Q ss_pred ecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCC--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceE
Q 022564 174 RLNESTGYIDYDQLEKSATLFRPKLIVAGASAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADV 251 (295)
Q Consensus 174 ~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~ 251 (295)
+ ..|++++++++++ +||+|+++.++| +...|+++|+++|++||+++++|++|+.+...... .. ++|+
T Consensus 203 d------~~d~e~l~~ai~~-~TklV~lesPsNPtG~i~Dl~~I~~lAk~~g~~lIVD~A~a~~~~~~pl-~~---gaDi 271 (464)
T PLN02509 203 N------TTNLDEVAAAIGP-QTKLVWLESPTNPRQQISDIRKIAEMAHAQGALVLVDNSIMSPVLSRPL-EL---GADI 271 (464)
T ss_pred C------CCCHHHHHHhCCc-CCeEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECCccccccCChh-hc---CCcE
Confidence 2 2378999999976 899999985544 48899999999999999999999999877653211 11 5999
Q ss_pred EEeCCCCCCCCCc---eEEEEEeCC
Q 022564 252 VTTTTHKSLRGPR---GAMIFFRKG 273 (295)
Q Consensus 252 ~~~s~~K~l~gp~---gG~l~~~~~ 273 (295)
+++|++||++|+. ||+++++++
T Consensus 272 vv~S~tK~l~G~gdv~gG~v~~~~~ 296 (464)
T PLN02509 272 VMHSATKFIAGHSDVMAGVLAVKGE 296 (464)
T ss_pred EEecCcccccCCCccceeEEEeccH
Confidence 9999999999875 588887665
No 183
>PLN02880 tyrosine decarboxylase
Probab=99.73 E-value=9.5e-17 Score=150.57 Aligned_cols=177 Identities=11% Similarity=0.064 Sum_probs=122.3
Q ss_pred cchHHHHHHHHHHHHHHHcCCCCCCcc---eeEEeCCChH-HHHHHHHhh----cC-C-----CC-eEEEecCCCCcccC
Q 022564 87 NEYIDMAESLCQKRALEAFRLDPEKWG---VNVQSLSGSP-SNFQVYTAL----LK-P-----HD-RIMALDLPHGGHLS 151 (295)
Q Consensus 87 ~~~~~~l~~~~~~~la~~~g~~~~~~~---~~v~~~sG~~-a~~~~~~al----~~-~-----gd-~Vl~~~~~~~~~~~ 151 (295)
++...++|+.+.+|+++++|.+.+.|. ..-++++|++ +++.++.+. ++ . .. .|++++..|.++..
T Consensus 117 sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~Sv~K 196 (490)
T PLN02880 117 SPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSALQK 196 (490)
T ss_pred CcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHHHHH
Confidence 355678999999999999999753110 1245667766 777555433 11 1 12 34455655555533
Q ss_pred ccccccccccccceee---eEEEeeecCC-CCCCCCHHHHHHHHhhc-----CCcEEEEc--CCCCCCccCHHHHHHHHH
Q 022564 152 HGYQTDTKKISAVSIF---FETMPYRLNE-STGYIDYDQLEKSATLF-----RPKLIVAG--ASAYARLYDYERIRKVCN 220 (295)
Q Consensus 152 ~~~~~~~~~~~~~g~~---~~~v~~~~~~-~~~~id~e~l~~~i~~~-----~tk~i~l~--~~n~~~~~~l~~I~~ia~ 220 (295)
++.+.|.. +..+| ++. +++++|+++|++++++. .+-+|+.+ .++.|...|+++|+++|+
T Consensus 197 --------aa~~lGlg~~~v~~Vp--~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDpl~eI~~i~~ 266 (490)
T PLN02880 197 --------ACQIAGIHPENCRLLK--TDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDPLLELGKIAK 266 (490)
T ss_pred --------HHHHcCCCHHHEEEee--cCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCcHHHHHHHHH
Confidence 44466653 44455 442 36799999999999642 13444444 555579999999999999
Q ss_pred HcCCEEEEEccccccccccCCC---CCCCCcceEEEeCCCCCCCCCce-EEEEEeCC
Q 022564 221 KQKAIMLADMAHISGLVAAGVI---PSPFEYADVVTTTTHKSLRGPRG-AMIFFRKG 273 (295)
Q Consensus 221 ~~~~~vivD~a~~~g~~~~~~~---~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~ 273 (295)
+||+|++||+||+.+....... -.++.++|.++.++|||++.|.+ |++++|+.
T Consensus 267 ~~~iwlHVDaA~gg~~~~~~~~~~~l~gie~aDSit~d~HKwl~~P~~~g~llvr~~ 323 (490)
T PLN02880 267 SNGMWFHVDAAYAGSACICPEYRHYIDGVEEADSFNMNAHKWFLTNFDCSLLWVKDR 323 (490)
T ss_pred HcCCEEEEehhhHHHHHhCHHHHHHhcCchhcCEEEECchhhcCCCccEEEEEEeCH
Confidence 9999999999998876644221 12234599999999999999999 99999964
No 184
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.73 E-value=6.6e-17 Score=149.61 Aligned_cols=150 Identities=22% Similarity=0.237 Sum_probs=113.7
Q ss_pred HHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecC
Q 022564 97 CQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 176 (295)
Q Consensus 97 ~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 176 (295)
+++.++++.|.+. .+.++||+.|+.+++.+++++||+|+++.+.|++....... .+...|..+ +.++.
T Consensus 68 le~~lA~l~g~~~-----al~~~SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~~~----~~~~~G~~v--~~vd~- 135 (427)
T PRK05994 68 LEERVAALEGGTA-----ALAVASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFGH----AFKSFGWQV--RWADA- 135 (427)
T ss_pred HHHHHHHHhCCCc-----EEEEcCHHHHHHHHHHHHhCCCCEEEEecCcchhHHHHHHH----HHHhcCcEE--EEECC-
Confidence 4488999999876 78888998888888899999999999999888776432211 112334333 33222
Q ss_pred CCCCCCCHHHHHHHHhhcCCcEEEEcCCCC--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCC-cceEEE
Q 022564 177 ESTGYIDYDQLEKSATLFRPKLIVAGASAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE-YADVVT 253 (295)
Q Consensus 177 ~~~~~id~e~l~~~i~~~~tk~i~l~~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~-~~D~~~ 253 (295)
.|++++++++++ +|++|+++.++| |...|+++|.++|+++|+++++|++|+.+.... ++. ++|+++
T Consensus 136 -----~d~~~l~~ai~~-~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~a~a~~~~~~-----pl~~gaDivv 204 (427)
T PRK05994 136 -----DDPASFERAITP-RTKAIFIESIANPGGTVTDIAAIAEVAHRAGLPLIVDNTLASPYLIR-----PIEHGADIVV 204 (427)
T ss_pred -----CCHHHHHHhcCc-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCccccccCC-----ccccCCcEEE
Confidence 388999999987 899999974444 478899999999999999999999998664332 222 599999
Q ss_pred eCCCCCCCCCce---EEEE
Q 022564 254 TTTHKSLRGPRG---AMIF 269 (295)
Q Consensus 254 ~s~~K~l~gp~g---G~l~ 269 (295)
.|+||+++|+.+ |++.
T Consensus 205 ~S~tK~lgg~~~~~gG~v~ 223 (427)
T PRK05994 205 HSLTKFLGGHGNSMGGIIV 223 (427)
T ss_pred EcCccccCCCCCcEEEEEE
Confidence 999999988764 5544
No 185
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.73 E-value=1.6e-16 Score=134.86 Aligned_cols=206 Identities=18% Similarity=0.167 Sum_probs=159.5
Q ss_pred eecCCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHH
Q 022564 50 ELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVY 129 (295)
Q Consensus 50 ~L~~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~ 129 (295)
.|.+|..-.|+.|++||..-... +. ++...++.+.+++-++..|....+. .-++.++|..++.+++
T Consensus 20 L~gPGPsnl~~~V~~A~~~~~lg-----h~-------sPe~~qIm~~v~egikyVFkT~n~~--tf~isgsGh~g~E~al 85 (385)
T KOG2862|consen 20 LLGPGPSNLSGRVQEAMSRPSLG-----HM-------SPEFVQIMDEVLEGIKYVFKTANAQ--TFVISGSGHSGWEAAL 85 (385)
T ss_pred eecCCCcCCCHHHHHhhcCCccc-----cC-------CHHHHHHHHHHHHHHHHHhccCCCc--eEEEecCCcchHHHHH
Confidence 56777777899999998764322 11 1445667777888899899875542 2567777877888888
Q ss_pred HhhcCCCCeEEEecCCCCcccCccccccc--cccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEc--CCC
Q 022564 130 TALLKPHDRIMALDLPHGGHLSHGYQTDT--KKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG--ASA 205 (295)
Q Consensus 130 ~al~~~gd~Vl~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~--~~n 205 (295)
..++.|||.|++... +-...+ ...+..|+++.+++. + -+....+|++++++.++++++++++ .+.
T Consensus 86 ~N~lePgd~vLv~~~--------G~wg~ra~D~~~r~ga~V~~v~~--~-~G~~~~le~i~~~lsqh~p~~vfv~hgdsS 154 (385)
T KOG2862|consen 86 VNLLEPGDNVLVVST--------GTWGQRAADCARRYGAEVDVVEA--D-IGQAVPLEEITEKLSQHKPKAVFVTHGDSS 154 (385)
T ss_pred HhhcCCCCeEEEEEe--------chHHHHHHHHHHhhCceeeEEec--C-cccCccHHHHHHHHHhcCCceEEEEecCcc
Confidence 999999999998772 222111 234566777777753 3 3457899999999999899999996 666
Q ss_pred CCCccC-HHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCce-EEEEEeCCchhhhccCCe
Q 022564 206 YARLYD-YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGKE 283 (295)
Q Consensus 206 ~~~~~~-l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~~~~~~~ 283 (295)
.|..+| ++.+.++|++|++++++|...+.|..++....++ +|++.....|.+++|.| +++..++......++.+.
T Consensus 155 TgV~q~~~~~~g~lc~k~~~lllVD~VaSlggt~F~mDewg---VDvaytgSQKaL~aP~GLsiisfS~ka~~~~~~rK~ 231 (385)
T KOG2862|consen 155 TGVLQDLLAISGELCHKHEALLLVDTVASLGGTEFEMDEWG---VDVAYTGSQKALGAPAGLSIISFSDKALEAIRDRKT 231 (385)
T ss_pred ccccchHHHHHHHHhhcCCeEEEEechhhcCCccceehhhc---ccEEEecchhhcCCCCCcceeecCHHHHHHHhhccC
Confidence 678888 7778899999999999999999999888887777 99999999999999999 999999987665555444
No 186
>PRK05839 hypothetical protein; Provisional
Probab=99.73 E-value=2.4e-16 Score=143.96 Aligned_cols=204 Identities=17% Similarity=0.078 Sum_probs=136.0
Q ss_pred cCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcC--CCCCCcceeEEeCCCh
Q 022564 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR--LDPEKWGVNVQSLSGS 122 (295)
Q Consensus 47 ~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g--~~~~~~~~~v~~~sG~ 122 (295)
..++|..|++. +++.+.+++.+.... . ..|....+..++++++.+++++.+| ++++ +|++|+|+
T Consensus 25 ~~i~l~~~~p~~~~~~~~~~a~~~~~~~-~-------~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~~----~I~it~G~ 92 (374)
T PRK05839 25 KGLDLTIGEPQFETPKFIQDALKNNAHL-L-------NKYPKSAGEESLREAQRGFFKRRFKIELKEN----ELIPTFGT 92 (374)
T ss_pred CeEEcCCCCCCCCCCHHHHHHHHHHhhc-c-------CCCCCCCCCHHHHHHHHHHHHHHhCCCCCcc----eEEEecCc
Confidence 56888888774 577777777765422 1 1244445667888889899988888 4665 89999999
Q ss_pred H-HHHHHHHhhc--CCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCC-CCCCCCHHHHHHHHhhcCCcE
Q 022564 123 P-SNFQVYTALL--KPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE-STGYIDYDQLEKSATLFRPKL 198 (295)
Q Consensus 123 ~-a~~~~~~al~--~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~id~e~l~~~i~~~~tk~ 198 (295)
+ ++..++.+++ ++||.|+++.|.|+.+ ...+...|.++..++ .+. +++.+|+++.+ + + ++|+
T Consensus 93 ~~al~~~~~~~~~~~~gd~vlv~~P~y~~~--------~~~~~~~g~~v~~v~--~~~~~~~~~d~~~~~--~-~-~~k~ 158 (374)
T PRK05839 93 REVLFNFPQFVLFDKQNPTIAYPNPFYQIY--------EGAAIASRAKVLLMP--LTKENDFTPSLNEKE--L-Q-EVDL 158 (374)
T ss_pred HHHHHHHHHHHhcCCCCCEEEECCCCchhh--------HHHHHhcCCEEEEee--cccccCCcCCcchhh--h-c-cccE
Confidence 9 7765667664 5899999999544444 334446675554444 542 34667765442 3 3 7999
Q ss_pred EEEcCCCCC-----CccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCC--------C--cceEEEeCCCCCC--C
Q 022564 199 IVAGASAYA-----RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPF--------E--YADVVTTTTHKSL--R 261 (295)
Q Consensus 199 i~l~~~n~~-----~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~--------~--~~D~~~~s~~K~l--~ 261 (295)
|+++++||| ....+++|+++|++||++||+|++++.- ......+..+ . ..-+++.|++|.| +
T Consensus 159 v~i~nP~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~-~~~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~ 237 (374)
T PRK05839 159 VILNSPNNPTGRTLSLEELIEWVKLALKHDFILINDECYSEI-YENTPPPSLLEASILVGNESFKNVLVINSISKRSSAP 237 (374)
T ss_pred EEEeCCCCCcCcccCHHHHHHHHHHHHHcCCEEEeccchhhc-ccCCCCCCHhhhhcccCccccCcEEEEeccccccCCc
Confidence 999866664 3445778888899999999999996532 1111111000 0 1237799999976 4
Q ss_pred CCceEEEEEeCCchhh
Q 022564 262 GPRGAMIFFRKGVKEI 277 (295)
Q Consensus 262 gp~gG~l~~~~~~~~~ 277 (295)
|.+.|+++.++++.+.
T Consensus 238 GlRiG~ii~~~~~~~~ 253 (374)
T PRK05839 238 GLRSGFIAGDASILKK 253 (374)
T ss_pred cceeEEEecCHHHHHH
Confidence 5566999998776543
No 187
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.73 E-value=1.5e-16 Score=148.13 Aligned_cols=214 Identities=12% Similarity=0.096 Sum_probs=143.5
Q ss_pred cCceecCCCCC-CCHHHHHHHhhhhhc-cCC-CC---CCCCcccCCcchHHHHHHHHHHHHHHHcC----CCCCCcceeE
Q 022564 47 KGLELIPSENF-TSVSVMQAVGSVMTN-KYS-EG---YPGARYYGGNEYIDMAESLCQKRALEAFR----LDPEKWGVNV 116 (295)
Q Consensus 47 ~~i~L~~~~~~-~~~~v~~al~~~l~~-~~~-~g---~~~~~~~~~~~~~~~l~~~~~~~la~~~g----~~~~~~~~~v 116 (295)
..|+|...||. .-+.+.+.+.+...- .+. .+ ...-.+|.+..+...+++++.+++.+++| ++++ +|
T Consensus 48 g~i~l~~aeN~l~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~~~~~~v~p~----~I 123 (447)
T PLN02607 48 GVIQMGLAENQVSFDLLEEYLKQHPEASSWGGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGKARFDPD----RI 123 (447)
T ss_pred ceEEEechhhhhhHHHHHHHHHhCchhhccccccccccchhhccCCCcchHHHHHHHHHHHHHhcCCCCCcCHH----He
Confidence 46999999985 455666666554321 000 01 11123466667788999999999988876 4665 89
Q ss_pred EeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccc-cceeeeEEEeeecCC-CCCCCCHHHHHHHHhh
Q 022564 117 QSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKIS-AVSIFFETMPYRLNE-STGYIDYDQLEKSATL 193 (295)
Q Consensus 117 ~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~v~~~~~~-~~~~id~e~l~~~i~~ 193 (295)
++|+|++ ++.+++.++++|||.|+++.|.|+++... +. ..|.++ ++++.+. +++.+|++++++++++
T Consensus 124 vit~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~~~--------~~~~~g~~v--v~v~~~~~~~f~~~~~~le~a~~~ 193 (447)
T PLN02607 124 VLTAGATAANELLTFILADPGDALLVPTPYYPGFDRD--------LRWRTGVKI--VPIHCDSSNNFQVTPQALEAAYQE 193 (447)
T ss_pred EEcCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHH--------HHhcCCcEE--EEEeCCCCCCCcCCHHHHHHHHHH
Confidence 9999999 88778888899999999999777666431 11 234333 5555543 3467999999998864
Q ss_pred -----cCCcEEEEcCCCCC--Ccc---CHHHHHHHHHHcCCEEEEEccccccccccCCCCC--------C---CCcceEE
Q 022564 194 -----FRPKLIVAGASAYA--RLY---DYERIRKVCNKQKAIMLADMAHISGLVAAGVIPS--------P---FEYADVV 252 (295)
Q Consensus 194 -----~~tk~i~l~~~n~~--~~~---~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~--------~---~~~~D~~ 252 (295)
.++|+|++++|||| ... .+++|.++|++|++.+|+|++++........... + ....-.+
T Consensus 194 a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v~v 273 (447)
T PLN02607 194 AEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERVHI 273 (447)
T ss_pred HHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcccHHHHHhhcCCCCCcCcEEE
Confidence 37899999866664 434 4778899999999999999997643322110000 0 0112267
Q ss_pred EeCCCCCCC--CCceEEEEEe-CCc
Q 022564 253 TTTTHKSLR--GPRGAMIFFR-KGV 274 (295)
Q Consensus 253 ~~s~~K~l~--gp~gG~l~~~-~~~ 274 (295)
+.|++|.|+ |-+-|+++.. +.+
T Consensus 274 i~s~SK~fg~~GlRvG~ivs~n~~l 298 (447)
T PLN02607 274 VYSLSKDLGLPGFRVGTIYSYNDKV 298 (447)
T ss_pred EEcchhcCCCCcceEEEEEEcCHHH
Confidence 899999884 4445999984 344
No 188
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.73 E-value=7.4e-17 Score=149.12 Aligned_cols=153 Identities=16% Similarity=0.093 Sum_probs=113.5
Q ss_pred HHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecC
Q 022564 97 CQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 176 (295)
Q Consensus 97 ~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 176 (295)
+++.++++.|.+. .++++||+.|+.+++.+++++||+|+++...|++....... .+...|.++ +.++ +
T Consensus 74 Le~~lA~l~g~~~-----av~~sSG~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~~~----~l~~~Gi~v--~~vd-d 141 (436)
T PRK07812 74 VEQRIAALEGGVA-----ALLLASGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHY----TLPKLGIEV--SFVE-D 141 (436)
T ss_pred HHHHHHHHhCCCe-----EEEEccHHHHHHHHHHHHhCCCCEEEEeCCcchHHHHHHHH----HhhcCeEEE--EEEC-C
Confidence 4488999999876 68898998888888899999999999999877765432111 111234333 3322 2
Q ss_pred CCCCCCCHHHHHHHHhhcCCcEEEEc-CCCC-CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEe
Q 022564 177 ESTGYIDYDQLEKSATLFRPKLIVAG-ASAY-ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTT 254 (295)
Q Consensus 177 ~~~~~id~e~l~~~i~~~~tk~i~l~-~~n~-~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~ 254 (295)
..|++++++++++ +|++|++. .+|+ +.+.|+++|.++|+++|+++++|++|+.+.....+ .. |+|+++.
T Consensus 142 ----~~d~e~l~~ai~~-~tklV~ie~~sNp~G~v~Dl~~I~~la~~~gi~liVD~t~a~~~~~~pl-~~---GaDivv~ 212 (436)
T PRK07812 142 ----PDDLDAWRAAVRP-NTKAFFAETISNPQIDVLDIPGVAEVAHEAGVPLIVDNTIATPYLIRPL-EH---GADIVVH 212 (436)
T ss_pred ----CCCHHHHHHhCCC-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccCCch-hc---CCCEEEE
Confidence 1389999999986 89999886 4444 58999999999999999999999999876553222 12 5999999
Q ss_pred CCCCCCCCCce--EEEEE
Q 022564 255 TTHKSLRGPRG--AMIFF 270 (295)
Q Consensus 255 s~~K~l~gp~g--G~l~~ 270 (295)
|+||+++|+.+ |.+++
T Consensus 213 S~tK~lgg~G~~i~G~vv 230 (436)
T PRK07812 213 SATKYLGGHGTAIAGVIV 230 (436)
T ss_pred ecccccCCCCCeEEEEEE
Confidence 99999987754 44444
No 189
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.73 E-value=2.1e-16 Score=145.37 Aligned_cols=223 Identities=14% Similarity=0.102 Sum_probs=141.2
Q ss_pred cccCHHHHHHHHHHHHH--HHcCceecCCC---C--CCC--HHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHH
Q 022564 28 EVVDPEIADIIEHEKAR--QWKGLELIPSE---N--FTS--VSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQ 98 (295)
Q Consensus 28 ~~~~~~~~~~~~~~~~~--~~~~i~L~~~~---~--~~~--~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~ 98 (295)
...+++.+..+...... ..+.|+|..|. + .+| +.+.+++.+.+.+.. ...|+...+..++++++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~------~~~Y~~~~G~~~lR~aia 79 (396)
T PRK09257 6 EAAPADPILGLMEAFRADPRPDKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETET------TKNYLPIEGLAAYRQAVQ 79 (396)
T ss_pred CCCCCChHHHHHHHHhhCCCcCcEecceeeEECCCCCEeccHHHHHHHHHhccccc------CCCcCCCCCCHHHHHHHH
Confidence 34455444444443333 23578988774 2 123 677777777654311 112555677788998888
Q ss_pred HHHHHHcCC--CCCCcceeE--EeCCChH-HHHHHHHhh--cCCCCeEEEecCCCCcccCccccccccccccceeeeEEE
Q 022564 99 KRALEAFRL--DPEKWGVNV--QSLSGSP-SNFQVYTAL--LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETM 171 (295)
Q Consensus 99 ~~la~~~g~--~~~~~~~~v--~~~sG~~-a~~~~~~al--~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v 171 (295)
+++.+..+. +++ +| ++|+|++ ++..++.++ ++|||+|++++|.|+.+ ...+...|.++..+
T Consensus 80 ~~~~~~~~~~~~~~----~i~v~iT~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~--------~~~~~~~g~~~v~v 147 (396)
T PRK09257 80 ELLFGADSPALAAG----RVATVQTPGGTGALRVGADFLKRAFPDAKVWVSDPTWPNH--------RAIFEAAGLEVKTY 147 (396)
T ss_pred HHhcCCCCcccccC----eEEEEecCCccHHHHHHHHHHHHhCCCCeEEECCCCcccH--------HHHHHHcCCcEEEE
Confidence 888765443 565 55 9999999 777676555 58999999999555444 33455677666555
Q ss_pred eeecCCCCCCCCHHHHHHHHhhc--CCcEEEEcCCCCC-----CccCHHHHHHHHHHcCCEEEEEcccccccccc-CCCC
Q 022564 172 PYRLNESTGYIDYDQLEKSATLF--RPKLIVAGASAYA-----RLYDYERIRKVCNKQKAIMLADMAHISGLVAA-GVIP 243 (295)
Q Consensus 172 ~~~~~~~~~~id~e~l~~~i~~~--~tk~i~l~~~n~~-----~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~-~~~~ 243 (295)
++. +++++.+|++++++.++.. ++++++++++||| ....+++|+++|++||++||+|+++.. .... +...
T Consensus 148 ~~~-~~~~~~~d~~~l~~~~~~~~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~-l~~~~~~~~ 225 (396)
T PRK09257 148 PYY-DAATKGLDFDAMLADLSQAPAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQG-FGDGLEEDA 225 (396)
T ss_pred ecc-ccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccc-cccchHHHH
Confidence 431 3345789999999988632 3444555666664 444577889999999999999999642 2211 0000
Q ss_pred CC---CC---cceEEEeCCCCCCC--CCceEEEEE
Q 022564 244 SP---FE---YADVVTTTTHKSLR--GPRGAMIFF 270 (295)
Q Consensus 244 ~~---~~---~~D~~~~s~~K~l~--gp~gG~l~~ 270 (295)
.+ +. ..-+++.|++|.|+ |.+-|++++
T Consensus 226 ~~~~~~~~~~~~vi~i~SfSK~~~~~GlRiG~~~~ 260 (396)
T PRK09257 226 YGLRAFAAAGLELLVASSFSKNFGLYGERVGALSV 260 (396)
T ss_pred HHHHHHHhcCCcEEEEEEcCCcCccccccceeEEE
Confidence 00 00 12377999999885 445599874
No 190
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.73 E-value=2e-16 Score=143.98 Aligned_cols=218 Identities=14% Similarity=0.060 Sum_probs=144.6
Q ss_pred ccCcccccCHHHHHHHHHHHHHH-HcCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHH
Q 022564 23 LNAPLEVVDPEIADIIEHEKARQ-WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQK 99 (295)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~-~~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~ 99 (295)
++++++..+.+.+..+.+..+.. .+.++|..+++. +++.+++++.+.... . + |+...+..++++++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~-~--~------Y~~~~G~~~lr~~ia~ 73 (364)
T PRK07865 3 VSARLPDFPWDTLAPAKATAAAHPDGIVDLSVGTPVDPVPPVIQEALAAAADA-P--G------YPTTAGTPELREAIVG 73 (364)
T ss_pred ccccCCCccHHHHHHHHHHHHhcCCCEEEcCCCCCCCCCCHHHHHHHHHHHhh-C--C------CCCccCCHHHHHHHHH
Confidence 46677777787777776654333 356889887653 367778887665432 1 2 3444556788888889
Q ss_pred HHHHHcCC---CCCCcceeEEeCCChH-HHHHHHHhh-cCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeee
Q 022564 100 RALEAFRL---DPEKWGVNVQSLSGSP-SNFQVYTAL-LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYR 174 (295)
Q Consensus 100 ~la~~~g~---~~~~~~~~v~~~sG~~-a~~~~~~al-~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 174 (295)
++.+.+|. +++ +|++|+|++ ++..++..+ +++||+|++++|.|+.+.. .+...|.++ ++++
T Consensus 74 ~l~~~~~~~~~~~~----~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~--------~~~~~g~~~--~~~~ 139 (364)
T PRK07865 74 WLARRRGVTGLDPA----AVLPVIGSKELVAWLPTLLGLGPGDVVVIPELAYPTYEV--------GARLAGATV--VRAD 139 (364)
T ss_pred HHHHHcCCCCCCcc----cEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcccHHH--------HHHhcCCEE--EecC
Confidence 99887764 465 899999999 776566777 7999999999966665533 333556443 3321
Q ss_pred cCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--Cc---cCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCC---
Q 022564 175 LNESTGYIDYDQLEKSATLFRPKLIVAGASAYA--RL---YDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPF--- 246 (295)
Q Consensus 175 ~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~~--~~---~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~--- 246 (295)
++++++. .++++|+++++||| .. .++++|.++|++||++||+|+++..-... +.....+
T Consensus 140 --------~~~~l~~----~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~-~~~~~~~~~~ 206 (364)
T PRK07865 140 --------SLTELGP----QRPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWD-AEPVSILDPR 206 (364)
T ss_pred --------ChhhCCc----ccceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccC-CCCCcccccc
Confidence 2333322 37899999855664 33 45678889999999999999997642221 1000000
Q ss_pred ----C-cceEEEeCCCCCCC--CCceEEEEEeCCchh
Q 022564 247 ----E-YADVVTTTTHKSLR--GPRGAMIFFRKGVKE 276 (295)
Q Consensus 247 ----~-~~D~~~~s~~K~l~--gp~gG~l~~~~~~~~ 276 (295)
. ...+++.|++|.|+ |.+.|+++.++++.+
T Consensus 207 ~~~~~~~~~i~~~S~SK~~~~~GlRiG~i~~~~~~~~ 243 (364)
T PRK07865 207 VCGGDHTGLLAVHSLSKQSNLAGYRAGFVAGDPALVA 243 (364)
T ss_pred ccCCccceEEEEeechhccCCCceeeEEEecCHHHHH
Confidence 0 13488999999874 555699998877644
No 191
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.73 E-value=4.3e-17 Score=148.95 Aligned_cols=152 Identities=19% Similarity=0.194 Sum_probs=111.1
Q ss_pred HHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeec
Q 022564 97 CQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL 175 (295)
Q Consensus 97 ~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 175 (295)
+++.++++.|.+ .+++++|++ ++..++.+++++||+|+++++.|++.+....... ...+..+ .. +
T Consensus 57 L~~~lA~l~g~~------~~i~~~sg~~Ai~~~l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~----~~~gi~v--~~--v 122 (386)
T PRK08045 57 VQRALAELEGGA------GAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLA----KRGCYRV--LF--V 122 (386)
T ss_pred HHHHHHHHhCCC------eEEEECCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHH----hhCCeEE--EE--e
Confidence 448888888853 355555555 8887888899999999999988876543222111 1112122 22 2
Q ss_pred CCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCC-cceEE
Q 022564 176 NESTGYIDYDQLEKSATLFRPKLIVAGASAYA--RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE-YADVV 252 (295)
Q Consensus 176 ~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~~--~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~-~~D~~ 252 (295)
+ ..|++++++++++ +|++|+++.++|| ...|+++|.++|+++|+++++|+++..+... .++. ++|++
T Consensus 123 d----~~d~e~l~~~l~~-~tklV~l~sP~NPtG~v~di~~I~~ia~~~g~~vivDeay~~~~~~-----~pl~~gaDiv 192 (386)
T PRK08045 123 D----QGDEQALRAALAE-KPKLVLVESPSNPLLRVVDIAKICHLAREAGAVSVVDNTFLSPALQ-----NPLALGADLV 192 (386)
T ss_pred C----CCCHHHHHHhccc-CCeEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccC-----CchhhCCCEE
Confidence 2 3589999999977 8999999866664 7889999999999999999999998766432 1222 59999
Q ss_pred EeCCCCCCCCCc---eEEEEEeC
Q 022564 253 TTTTHKSLRGPR---GAMIFFRK 272 (295)
Q Consensus 253 ~~s~~K~l~gp~---gG~l~~~~ 272 (295)
+.|++||++|+. +|++++++
T Consensus 193 v~S~tK~l~G~~d~~~G~vi~~~ 215 (386)
T PRK08045 193 LHSCTKYLNGHSDVVAGVVIAKD 215 (386)
T ss_pred EeecceeccCCCCceeEEEEeCc
Confidence 999999999987 47776654
No 192
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.73 E-value=1.2e-16 Score=145.01 Aligned_cols=202 Identities=13% Similarity=0.062 Sum_probs=136.9
Q ss_pred cCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-
Q 022564 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP- 123 (295)
Q Consensus 47 ~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~- 123 (295)
+.++|..++++ +++.+.+++.+.+... .+|+. .+... +|+.++++++++++ +|++|+|++
T Consensus 31 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~~-------~~~~~----lr~~ia~~~~~~~~----~I~it~G~~~ 93 (357)
T PRK14809 31 DLVKLSSNENPHGPSPAAVEAIREAAERV--HSYPK-------ASHAD----LTAALADRWDVSPE----QVWLANGGDG 93 (357)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHhhh--hcCCC-------CCHHH----HHHHHHHHhCCCcc----eEEECCCHHH
Confidence 56999988774 6888889988776431 13332 12334 44677777899887 899999999
Q ss_pred HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcC
Q 022564 124 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGA 203 (295)
Q Consensus 124 a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~ 203 (295)
++..++.+++++||.|++++|.|+.+ ...+...|..+..++++.+ +++.+|.+++++.. + ++|+|++++
T Consensus 94 al~~~~~~~~~~gd~V~v~~P~y~~~--------~~~~~~~g~~~~~~~l~~~-~~~~~~~~~~~~~~-~-~~k~i~l~~ 162 (357)
T PRK14809 94 ALDYLARAMLDPGDTVLVPDPGFAYY--------GMSARYHHGEVREYPVSKA-DDFEQTADTVLDAY-D-GERIVYLTS 162 (357)
T ss_pred HHHHHHHHhcCCCCEEEEeCCChHHH--------HHHHHHcCCeEEEEecccC-cCCCcCHHHHHHhh-c-CCcEEEEeC
Confidence 77778888999999999999554432 2233355655655664332 35678888887765 3 689999986
Q ss_pred CCCC--CccCHHHHHHHHHHc--CCEEEEEccccccccccCCCCCC-CC--cceEEEeCCCCCCC--CCceEEEEEeCCc
Q 022564 204 SAYA--RLYDYERIRKVCNKQ--KAIMLADMAHISGLVAAGVIPSP-FE--YADVVTTTTHKSLR--GPRGAMIFFRKGV 274 (295)
Q Consensus 204 ~n~~--~~~~l~~I~~ia~~~--~~~vivD~a~~~g~~~~~~~~~~-~~--~~D~~~~s~~K~l~--gp~gG~l~~~~~~ 274 (295)
+||| ...+.+++.++++.. +++||+|+++..-.. .. .... +. ..-+++.|++|.|+ |.+-|++++++++
T Consensus 163 p~NPTG~~~s~~~~~~l~~~~~~~~~iI~De~y~~~~~-~~-~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~ 240 (357)
T PRK14809 163 PHNPTGSEIPLDEVEALAERTDEETLVVVDEAYGEFAE-RP-SAVALVEERDDVAVLRTFSKAYGLAGLRLGYAVVPEEW 240 (357)
T ss_pred CCCCCCcCCCHHHHHHHHHhCccCcEEEEechhhhccC-Cc-hhHHHHhhCCCEEEEecchhHhcCcchhheeeecCHHH
Confidence 6664 677777777766653 789999999753221 11 0000 01 12377899999885 4455999998876
Q ss_pred hhhh
Q 022564 275 KEIN 278 (295)
Q Consensus 275 ~~~~ 278 (295)
.+..
T Consensus 241 ~~~~ 244 (357)
T PRK14809 241 ADAY 244 (357)
T ss_pred HHHH
Confidence 5543
No 193
>PRK05968 hypothetical protein; Provisional
Probab=99.73 E-value=4.9e-17 Score=148.92 Aligned_cols=157 Identities=13% Similarity=0.094 Sum_probs=117.1
Q ss_pred HHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecC
Q 022564 97 CQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 176 (295)
Q Consensus 97 ~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 176 (295)
+++.+++++|.+. .+++++|+.|+.+++.+++++||+|+++.+.|++.+..+. ..+...|.++..+ +
T Consensus 68 le~~lA~l~g~~~-----av~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~y~~t~~~~~----~~~~~~G~~v~~v--d-- 134 (389)
T PRK05968 68 FEEMLAKLEGAED-----ARGFASGMAAISSTVLSFVEPGDRIVAVRHVYPDAFRLFE----TILKRMGVEVDYV--D-- 134 (389)
T ss_pred HHHHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHH----HHHHHcCceEEEe--C--
Confidence 4488999999875 6888899888887888889999999999988877643221 1122345444333 2
Q ss_pred CCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEe
Q 022564 177 ESTGYIDYDQLEKSATLFRPKLIVAGASAYA--RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTT 254 (295)
Q Consensus 177 ~~~~~id~e~l~~~i~~~~tk~i~l~~~n~~--~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~ 254 (295)
..|++++++++ + +||+|+++.+.++ ...|+++|.++|++||+++++|++++.+...... . .++|++++
T Consensus 135 ----~~d~~~l~~~i-~-~tklV~ie~pt~~~~~~~dl~~i~~la~~~gi~vivD~a~a~~~~~~p~-~---~g~Divv~ 204 (389)
T PRK05968 135 ----GRDEEAVAKAL-P-GAKLLYLESPTSWVFELQDVAALAALAKRHGVVTMIDNSWASPVFQRPI-T---LGVDLVIH 204 (389)
T ss_pred ----CCCHHHHHHhc-c-cCCEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcchhccCch-h---cCCcEEEe
Confidence 12889999988 4 7999999744443 6789999999999999999999998766533221 1 25899999
Q ss_pred CCCCCCCCCc---eEEEEEeCCchh
Q 022564 255 TTHKSLRGPR---GAMIFFRKGVKE 276 (295)
Q Consensus 255 s~~K~l~gp~---gG~l~~~~~~~~ 276 (295)
|++|+++||. ||+++.++++.+
T Consensus 205 S~tK~l~g~~~~~gG~i~~~~~~~~ 229 (389)
T PRK05968 205 SASKYLGGHSDTVAGVVAGSKEHIA 229 (389)
T ss_pred eccccccCCCCeEEEEEEECHHHHH
Confidence 9999999863 588888877544
No 194
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.73 E-value=8.9e-17 Score=150.63 Aligned_cols=206 Identities=14% Similarity=0.149 Sum_probs=131.2
Q ss_pred cCceecCCCC-CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCC---CCCCcceeEEeCCCh
Q 022564 47 KGLELIPSEN-FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL---DPEKWGVNVQSLSGS 122 (295)
Q Consensus 47 ~~i~L~~~~~-~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~---~~~~~~~~v~~~sG~ 122 (295)
+.|+|..+++ +.+++.+.++.+.+... .|+. ........+..+++++.+.++. ++++ .+|++|+|+
T Consensus 95 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~---~Y~~-----p~g~~~~~e~iv~~y~~~~~~~~~~~~~~--~~V~it~Ga 164 (521)
T TIGR03801 95 DIISYVIDQLGFDPDAFLYEMCDGIIGD---NYPV-----PDRMLPHSEKIVHQYLIQEMCGNKPPPGE--FDLFAVEGG 164 (521)
T ss_pred HHHhhcCCCCCCCCCHHHHHHHHHhhcC---CCCC-----CCCCHHHHHHHHHHHHHhhccCCCCCCCc--CeEEEeCCH
Confidence 4588887776 34556666666654221 1221 1123344444455666665442 2221 179999999
Q ss_pred H-HHHHHHHh-----hcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCC-C-----CCCCHHHHHHH
Q 022564 123 P-SNFQVYTA-----LLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES-T-----GYIDYDQLEKS 190 (295)
Q Consensus 123 ~-a~~~~~~a-----l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~-~-----~~id~e~l~~~ 190 (295)
+ ++..++.+ +++|||+|++++|.|+.+ ...+.+.+...+.++++.+.+ + +.+|.++++++
T Consensus 165 t~al~~~~~~l~~~~ll~pGD~Vlv~~P~y~~y--------~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~ 236 (521)
T TIGR03801 165 TAAMCYIFDSLKANELLKKGDKIALMTPIFTPY--------LEIPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKL 236 (521)
T ss_pred HHHHHHHHHHHhHhhcCCCCCEEEEeCCCcHHH--------HHHHHHhcCCcEEEEeecccccccccccCCCCHHHHHHh
Confidence 9 77767666 789999999999555544 333334433344455555421 2 78999999998
Q ss_pred HhhcCCcEEEEcCCCCC--Ccc---CHHHHHHHHHHc--CCEEEEEccccccccccCCCCC-C-CCcceEEEeCCCCCC-
Q 022564 191 ATLFRPKLIVAGASAYA--RLY---DYERIRKVCNKQ--KAIMLADMAHISGLVAAGVIPS-P-FEYADVVTTTTHKSL- 260 (295)
Q Consensus 191 i~~~~tk~i~l~~~n~~--~~~---~l~~I~~ia~~~--~~~vivD~a~~~g~~~~~~~~~-~-~~~~D~~~~s~~K~l- 260 (295)
+++ ++|+|++++|||| ... .+++|+++|++| +++||+|+++..- .. ..... . ....-+++.|++|+|
T Consensus 237 ~~~-~~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f-~~-~~~sl~~~~~~~vI~v~SfSK~fg 313 (521)
T TIGR03801 237 RDP-SIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTF-VD-DFRSLFAELPYNTIGVYSFSKYFG 313 (521)
T ss_pred cCC-CCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhh-cc-cccchhhhCCCCEEEEEcchhhcc
Confidence 776 8999999755564 343 477888999987 9999999997531 11 11000 0 111348899999987
Q ss_pred -CCCceEEEEEeCC
Q 022564 261 -RGPRGAMIFFRKG 273 (295)
Q Consensus 261 -~gp~gG~l~~~~~ 273 (295)
.|++-|+++.+++
T Consensus 314 ~~G~RlG~i~~~~~ 327 (521)
T TIGR03801 314 ATGWRLGTIALHKD 327 (521)
T ss_pred CchhhhhhhhcCch
Confidence 4666699999865
No 195
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.73 E-value=9.4e-17 Score=146.34 Aligned_cols=199 Identities=16% Similarity=0.100 Sum_probs=135.4
Q ss_pred CceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-H
Q 022564 48 GLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-S 124 (295)
Q Consensus 48 ~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a 124 (295)
.++|+.|++. +++.+.+++.+.+.... +|+. .. ..+ +++.++++++++++ +|++++|++ +
T Consensus 34 ~~~l~~~~~~~~~~~~~~~a~~~~~~~~~--~Y~~------~~-~~~----Lr~~ia~~~~~~~~----~I~it~G~~~~ 96 (369)
T PRK08153 34 RARIGANESGFGPSPSVIAAMREAAAEIW--KYGD------PE-NHD----LRHALAAHHGVAPE----NIMVGEGIDGL 96 (369)
T ss_pred eeEecCCCCCCCCCHHHHHHHHHHHHHhh--cCCC------Cc-cHH----HHHHHHHHhCCCHH----HEEEcCCHHHH
Confidence 4699988874 68889999987764311 2222 11 233 45777788899886 899999999 7
Q ss_pred HHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCC
Q 022564 125 NFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGAS 204 (295)
Q Consensus 125 ~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~ 204 (295)
+..++.+++++||.|++..|.|+.+.. .+...|.++..++ .+ +..+|++++++.+...++++++++.|
T Consensus 97 l~~~~~~~~~~gd~vlv~~p~y~~~~~--------~~~~~g~~~~~vp--~~--~~~~~~~~l~~~~~~~~~~~i~l~~P 164 (369)
T PRK08153 97 LGLIVRLYVEPGDPVVTSLGAYPTFNY--------HVAGFGGRLVTVP--YR--DDREDLDALLDAARRENAPLVYLANP 164 (369)
T ss_pred HHHHHHHhcCCCCEEEECCCcchHHHH--------HHHHcCCeEEEee--CC--CCCCCHHHHHHHhcccCCcEEEEeCC
Confidence 766778889999999999966665532 2234555454444 44 23589999988775448999999866
Q ss_pred CC--CCccCHHHHHHHHHHc--CCEEEEEccccccccccCCCCCCCC---cceEEEeCCCCCCC--CCceEEEEEeCCch
Q 022564 205 AY--ARLYDYERIRKVCNKQ--KAIMLADMAHISGLVAAGVIPSPFE---YADVVTTTTHKSLR--GPRGAMIFFRKGVK 275 (295)
Q Consensus 205 n~--~~~~~l~~I~~ia~~~--~~~vivD~a~~~g~~~~~~~~~~~~---~~D~~~~s~~K~l~--gp~gG~l~~~~~~~ 275 (295)
|| |...+.+++.++++.. +++||+|+++..- ...+.. .++. ..-+++.|++|.++ |.+-|++++++++.
T Consensus 165 ~NPtG~~~~~~~l~~l~~~~~~~~~lI~DE~y~~~-~~~~~~-~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~v~~~~~~ 242 (369)
T PRK08153 165 DNPMGSWHPAADIVAFIEALPETTLLVLDEAYCET-APAGAA-PPIDTDDPNVIRMRTFSKAYGLAGARVGYAIGAPGTI 242 (369)
T ss_pred CCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhh-cCcccc-hhhhhcCCCEEEEecchHhccCcchheeeeecCHHHH
Confidence 66 4777777777766543 8999999997532 211111 1111 13377999999885 44559999987765
Q ss_pred hh
Q 022564 276 EI 277 (295)
Q Consensus 276 ~~ 277 (295)
+.
T Consensus 243 ~~ 244 (369)
T PRK08153 243 KA 244 (369)
T ss_pred HH
Confidence 43
No 196
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.73 E-value=1.9e-17 Score=150.14 Aligned_cols=199 Identities=13% Similarity=0.095 Sum_probs=129.5
Q ss_pred ceecCCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCc---chHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCC-hH-
Q 022564 49 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGN---EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSG-SP- 123 (295)
Q Consensus 49 i~L~~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~---~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG-~~- 123 (295)
+++++|....|+.|+++|.+.+.+ +. ++++..+.-+ ....++.+.+|+.+++++|++.+. +|++++| +|
T Consensus 1 ~~~~pGp~~~p~~V~~a~~~~~~~-~~--~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~~---~vvf~~gs~T~ 74 (355)
T cd00611 1 INFSAGPAALPEEVLEQAQKELLD-FN--GLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNY---KVLFLQGGATG 74 (355)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHhh-cc--cCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCc---eEEEEcCCchH
Confidence 468889989999999999998855 31 3332222222 233466778999999999984322 7888877 66
Q ss_pred HHHHHHHhhcC---CCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCC-C-HHHHHHHHhhcCCcE
Q 022564 124 SNFQVYTALLK---PHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYI-D-YDQLEKSATLFRPKL 198 (295)
Q Consensus 124 a~~~~~~al~~---~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~i-d-~e~l~~~i~~~~tk~ 198 (295)
++.+++.+++. +||+|++.. +.....+.++..|.+++.++. + +++.. + ++..+..+++ ++++
T Consensus 75 a~~~~~~~l~~~~~~~~~i~~g~---------~~~~~~~~a~~~g~~~~~~~~--~-~~g~~~~~~~~~~~~~~~-~~~l 141 (355)
T cd00611 75 QFAAVPLNLLGDKGTADYVVTGA---------WSAKAAKEAKRYGGVVVIVAA--K-EEGKYTKIPDVETWDLAP-DAAY 141 (355)
T ss_pred HHHHHHHhcCCCCCeEEEEECCH---------HHHHHHHHHHhcCCCcEEEec--c-cccCCCCCCCHhhcCCCC-CCCE
Confidence 77778888877 555555422 111001112234555555553 3 22211 3 2222233454 8999
Q ss_pred EEEc-CCCC-CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCce-EEEEEeCCch
Q 022564 199 IVAG-ASAY-ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVK 275 (295)
Q Consensus 199 i~l~-~~n~-~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~ 275 (295)
|.++ .+|. |.. +. ++++.||+++++|++|++|..+.++... |++++|+||+| ||.| |++++++++.
T Consensus 142 V~~~h~~t~tG~~--~~---~i~~~~g~~~~VDa~qs~g~~~idv~~~-----~~~~ss~~K~l-GP~G~g~l~~~~~~~ 210 (355)
T cd00611 142 VHYCSNETIHGVE--FD---EVPDTGGVPLVADMSSNILSRPIDVSKF-----GVIYAGAQKNL-GPAGVTVVIVRKDLL 210 (355)
T ss_pred EEEeCCcccccEE--cc---eecccCCCeEEEEccccccCCCCCHHHh-----CEEEeeccccc-CCCceEEEEECHHHH
Confidence 8886 3333 443 22 4566699999999999999999887653 45667799976 7999 9999999876
Q ss_pred hh
Q 022564 276 EI 277 (295)
Q Consensus 276 ~~ 277 (295)
+.
T Consensus 211 ~~ 212 (355)
T cd00611 211 GK 212 (355)
T ss_pred hh
Confidence 54
No 197
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.72 E-value=1.5e-16 Score=147.36 Aligned_cols=199 Identities=16% Similarity=0.128 Sum_probs=143.8
Q ss_pred CCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhh
Q 022564 54 SENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTAL 132 (295)
Q Consensus 54 ~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al 132 (295)
+...+++.+.+.+...+.... +.++ .++...++|+.+-.+++++++.+.+ ..-.+|+|++ +++.++.+.
T Consensus 70 ~~~~~~~~a~~~~~~~~~~nl--~d~~-----~~p~a~~~E~~~v~~l~~l~~~~~~---~~G~~t~GgTean~lal~aa 139 (460)
T COG0076 70 CPTRVPPVAAELLVSALNKNL--GDPD-----ESPAAAELEERVVNMLSDLLGAPEE---ASGTFTSGGTEANLLALLAA 139 (460)
T ss_pred CCCCCHHHHHHHHHHHHhhcC--CCcc-----cChhHHHHHHHHHHHHHHHhCCCCC---CceEEEcChHHHHHHHHHHH
Confidence 344567778888888776633 3222 2235678888999999999999644 2677888888 777555443
Q ss_pred ---cC--CC---C------eEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcE
Q 022564 133 ---LK--PH---D------RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKL 198 (295)
Q Consensus 133 ---~~--~g---d------~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~ 198 (295)
.. .+ . +|+++...|.++.. .+.+.|.+...++ .++.+.++|++++++++++ ++..
T Consensus 140 r~~~~~~~~~~~~~~~~~P~ii~s~~aH~s~~K--------aa~~lG~~~~~v~--~~~~~~~id~~~l~~~i~~-~t~~ 208 (460)
T COG0076 140 RERWRKRALAESGKPGGKPNIVCSETAHFSFEK--------AARYLGLGLRRVP--TVPTDYRIDVDALEEAIDE-NTIG 208 (460)
T ss_pred HHHHHHHhhhcccccCCCCeEEecCcchhHHHH--------HHHHhCCCceeEE--eccCccccCHHHHHHHHHh-hccC
Confidence 11 11 1 58888755555543 4557777776676 3433689999999999988 4443
Q ss_pred --EEEc--CCCCCCccCHHHHHHHHHHcCCEEEEEccccccccccCCC----CCCCCcceEEEeCCCCCCCCCce-EEEE
Q 022564 199 --IVAG--ASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI----PSPFEYADVVTTTTHKSLRGPRG-AMIF 269 (295)
Q Consensus 199 --i~l~--~~n~~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~----~~~~~~~D~~~~s~~K~l~gp~g-G~l~ 269 (295)
|+.+ .+..|.+.|+++|+++|+++++|++||+|.+...+++.-. ...+.++|.++.++|||+..|.| |+++
T Consensus 209 g~vV~~aGtT~~G~iDdi~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~~~f~l~~vdSIt~d~HK~g~aP~~~G~il 288 (460)
T COG0076 209 GVVVGTAGTTDTGSIDDIEELADIAEEYGIWLHVDAAFGGFLLPFLEPDGRWDFGLEGVDSITVDGHKYGLAPIGCGVVL 288 (460)
T ss_pred ceEEEEecCCCCCccCCHHHHHHHHHHcCCcEEEEccccceeecccCccchhhcCCCCceEEEECcccccCCCCCceEEE
Confidence 4433 5555799999999999999999999999976665544322 23345799999999999999999 9999
Q ss_pred EeCC
Q 022564 270 FRKG 273 (295)
Q Consensus 270 ~~~~ 273 (295)
.|++
T Consensus 289 ~rd~ 292 (460)
T COG0076 289 FRDE 292 (460)
T ss_pred EECH
Confidence 9987
No 198
>PLN02242 methionine gamma-lyase
Probab=99.72 E-value=4.1e-17 Score=150.42 Aligned_cols=165 Identities=12% Similarity=0.056 Sum_probs=117.0
Q ss_pred chHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceee
Q 022564 88 EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIF 167 (295)
Q Consensus 88 ~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~ 167 (295)
+...+++ +.+++++|.+. .+++.+|+.|+..++.+++++||+|+++.+.|+++....... ..+..|..
T Consensus 76 Pt~~~LE----~~lA~l~g~~~-----~l~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~~~---~~~~~G~~ 143 (418)
T PLN02242 76 PTVLNLG----RQMAALEGTEA-----AYCTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALLAHF---LPRKCNIT 143 (418)
T ss_pred hhHHHHH----HHHHHHhCCCe-----EEEEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHh---hhhccCce
Confidence 3444455 88999999876 566666666888889999999999999997766553321110 11223433
Q ss_pred eEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCC
Q 022564 168 FETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYA--RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP 245 (295)
Q Consensus 168 ~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~~--~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~ 245 (295)
+ ..++ ..|++++++++++.+||+|+++.++|| .+.|+++|.++|++||++||+|++|+.... +....
T Consensus 144 ~--~~~d------~~d~e~l~~~i~~~~tklV~lesp~NPtG~v~dl~~I~~la~~~gi~livDea~~~~~~--~~~~~- 212 (418)
T PLN02242 144 T--TFVD------ITDLEAVKKAVVPGKTKVLYFESISNPTLTVADIPELARIAHEKGVTVVVDNTFAPMVL--SPARL- 212 (418)
T ss_pred E--EEcC------CCCHHHHHHhcCcCCCEEEEEecCCCCCCcccCHHHHHHHHHHhCCEEEEECCCCccCC--CHHHc-
Confidence 3 3222 238999999997634999999755553 778999999999999999999999854322 21122
Q ss_pred CCcceEEEeCCCCCCCCCc---eEEEEEeCCchhh
Q 022564 246 FEYADVVTTTTHKSLRGPR---GAMIFFRKGVKEI 277 (295)
Q Consensus 246 ~~~~D~~~~s~~K~l~gp~---gG~l~~~~~~~~~ 277 (295)
++|++++|++|+++|+. ||++++++++.+.
T Consensus 213 --g~divv~S~SK~l~g~g~~~gG~iv~~~~li~~ 245 (418)
T PLN02242 213 --GADVVVHSISKFISGGADIIAGAVCGPAELVNS 245 (418)
T ss_pred --CCcEEEEeCccccCCCCCceEEEEEcCHHHHHH
Confidence 49999999999997654 6999988776543
No 199
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.72 E-value=8.4e-17 Score=148.74 Aligned_cols=153 Identities=16% Similarity=0.161 Sum_probs=113.0
Q ss_pred HHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecC
Q 022564 97 CQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 176 (295)
Q Consensus 97 ~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 176 (295)
+++.+++++|.+. .+++++|+.++..++.+++++||+|+++.+.|++.+.... ..+...|.++..+ +.
T Consensus 62 le~~lA~l~g~~~-----~v~~~sG~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~~----~~~~~~G~~v~~v--~~- 129 (418)
T TIGR01326 62 LEQRIAALEGGVA-----ALAVASGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLFK----HTLKRLGIEVRFV--DP- 129 (418)
T ss_pred HHHHHHHHhCCCe-----EEEEccHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHH----HHHHHcCcEEEEE--CC-
Confidence 5588999999754 6777778778887888899999999999987776543221 1122345444333 22
Q ss_pred CCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCC-cceEEE
Q 022564 177 ESTGYIDYDQLEKSATLFRPKLIVAGASAYA--RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE-YADVVT 253 (295)
Q Consensus 177 ~~~~~id~e~l~~~i~~~~tk~i~l~~~n~~--~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~-~~D~~~ 253 (295)
.|++++++++++ ++++|+++.++|| .+.|+++|.++|+++|+++|+|++++.+.... ++. ++|+++
T Consensus 130 -----~d~~~l~~~l~~-~t~~V~le~p~NPtg~v~dl~~I~~la~~~~i~livD~t~~~~~~~~-----~l~~g~Divv 198 (418)
T TIGR01326 130 -----DDPEEFEKAIDE-NTKAVFAETIGNPAINVPDIEAIAEVAHAHGVPLIVDNTFATPYLCR-----PIDHGADIVV 198 (418)
T ss_pred -----CCHHHHHHhcCc-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCchhhcCC-----chhcCCeEEE
Confidence 289999999987 8999999755554 77899999999999999999999987663221 222 599999
Q ss_pred eCCCCCCCCCce--EEEEEeC
Q 022564 254 TTTHKSLRGPRG--AMIFFRK 272 (295)
Q Consensus 254 ~s~~K~l~gp~g--G~l~~~~ 272 (295)
.|++|+++|+.. |+++++.
T Consensus 199 ~S~sK~l~g~G~~lGg~v~~~ 219 (418)
T TIGR01326 199 HSATKYIGGHGTAIGGVIVDG 219 (418)
T ss_pred ECccccccCCccceEEEEEec
Confidence 999999977543 5555543
No 200
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.72 E-value=1.6e-16 Score=144.67 Aligned_cols=201 Identities=18% Similarity=0.112 Sum_probs=139.4
Q ss_pred HcCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH
Q 022564 46 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP 123 (295)
Q Consensus 46 ~~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~ 123 (295)
.+.++|..++++ +++.+++++.+.+.. + ..|+.. .. .+ +++.++++++++++ +|++|+|++
T Consensus 32 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~-~-~~y~~~------~~-~~----lr~~ia~~~~~~~~----~i~~t~G~~ 94 (367)
T PRK02731 32 ADIIKLASNENPLGPSPKAIEAIRAAADE-L-HRYPDG------SG-FE----LKAALAEKFGVDPE----RIILGNGSD 94 (367)
T ss_pred CceEEecCCCCCCCCCHHHHHHHHHHHHh-h-cCCCCC------cH-HH----HHHHHHHHhCcCHH----HEEEcCCHH
Confidence 356889888764 578889998887643 2 123321 11 23 55788888899876 899999999
Q ss_pred -HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEc
Q 022564 124 -SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 202 (295)
Q Consensus 124 -a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~ 202 (295)
++..++.+++++||+|+++++.|..+. ..+...|.++..++ . +++.+|++++++.+++ ++++|+++
T Consensus 95 ~~l~~~~~~l~~~gd~vl~~~p~y~~~~--------~~~~~~g~~~~~~~--~--~~~~~~~~~l~~~~~~-~~~~v~l~ 161 (367)
T PRK02731 95 EILELLARAYLGPGDEVIYSEHGFAVYP--------IAAQAVGAKPVEVP--A--KDYGHDLDAMLAAVTP-RTRLVFIA 161 (367)
T ss_pred HHHHHHHHHhcCCCCEEEEecCCHHHHH--------HHHHHcCCeEEEec--c--cCCCCCHHHHHHHhCC-CCcEEEEe
Confidence 666677888999999999996654332 12234565554443 3 3578999999999976 89999998
Q ss_pred CCCC--CCccCHHHHHHHHHHc--CCEEEEEccccccccccCCCCCCC-----CcceEEEeCCCCCCC--CCceEEEEEe
Q 022564 203 ASAY--ARLYDYERIRKVCNKQ--KAIMLADMAHISGLVAAGVIPSPF-----EYADVVTTTTHKSLR--GPRGAMIFFR 271 (295)
Q Consensus 203 ~~n~--~~~~~l~~I~~ia~~~--~~~vivD~a~~~g~~~~~~~~~~~-----~~~D~~~~s~~K~l~--gp~gG~l~~~ 271 (295)
.+|| |...+.++|.++++.. ++++++|+++...... +....++ ....+++.|++|.++ |.+-|+++++
T Consensus 162 ~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~y~~~~~~-~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~ 240 (367)
T PRK02731 162 NPNNPTGTYLPAEEVERFLAGVPPDVLVVLDEAYAEYVRR-KDYEDGLELVAKFPNVVVTRTFSKAYGLAGLRVGYGIAP 240 (367)
T ss_pred CCCCCCCcCCCHHHHHHHHHhCCCCcEEEEECcHHHhccC-cCcccHHHHHhhcCCEEEEeeehHhhcCcccceeeeeCC
Confidence 5555 4888899999998875 8999999997543321 1111110 113477889999864 4445999998
Q ss_pred CCchhh
Q 022564 272 KGVKEI 277 (295)
Q Consensus 272 ~~~~~~ 277 (295)
+++.+.
T Consensus 241 ~~~~~~ 246 (367)
T PRK02731 241 PEIIDA 246 (367)
T ss_pred HHHHHH
Confidence 876543
No 201
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.72 E-value=1e-16 Score=146.90 Aligned_cols=153 Identities=16% Similarity=0.054 Sum_probs=111.9
Q ss_pred HHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeec
Q 022564 97 CQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL 175 (295)
Q Consensus 97 ~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 175 (295)
+++.+++++|.+ .+++++|++ |+.+++.+++++||+|+++++.|+++...... .+...|..+ ..++.
T Consensus 70 Le~~lA~l~g~~------~~l~~~sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~~----~~~~~Gi~v--~~vd~ 137 (394)
T PRK07050 70 LAQRLAEIEGGR------HALLQPSGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGEW----LARDFGITV--RFYDP 137 (394)
T ss_pred HHHHHHHHhCCC------eEEEeccHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHHH----HHHhcCeEE--EEECC
Confidence 448888888864 466666666 88888899999999999999888776432211 112345433 33221
Q ss_pred CCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEE
Q 022564 176 NESTGYIDYDQLEKSATLFRPKLIVAGASAYA--RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVT 253 (295)
Q Consensus 176 ~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~~--~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~ 253 (295)
. +.+++++++++ +||+|+++.++|+ ...++++|.++|+++|+++++|++|+.+.....+. . |+|+++
T Consensus 138 ~------~~~~l~~~i~~-~tklV~le~p~Np~~~~~di~~I~~ia~~~gi~livD~a~a~~~~~~~l~-~---GaDi~v 206 (394)
T PRK07050 138 L------IGAGIADLIQP-NTRLIWLEAPGSVTMEVPDVPAITAAARARGVVTAIDNTYSAGLAFKPFE-H---GVDISV 206 (394)
T ss_pred C------CHHHHHHhcCC-CCeEEEEECCCCCCccHhhHHHHHHHHHHcCCEEEEECCcccccccCHHH-c---CCeEEE
Confidence 1 45788988877 8999999855554 78899999999999999999999998876532211 1 599999
Q ss_pred eCCCCCCCCCc---eEEEEEeC
Q 022564 254 TTTHKSLRGPR---GAMIFFRK 272 (295)
Q Consensus 254 ~s~~K~l~gp~---gG~l~~~~ 272 (295)
.|++|+++|.. ||++++++
T Consensus 207 ~S~tK~~~g~~~~~gG~v~~~~ 228 (394)
T PRK07050 207 QALTKYQSGGSDVLMGATITAD 228 (394)
T ss_pred EECCceecCCCCeeEEEEEECC
Confidence 99999997654 67677654
No 202
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.72 E-value=1.8e-16 Score=143.79 Aligned_cols=191 Identities=16% Similarity=0.161 Sum_probs=127.3
Q ss_pred cCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-
Q 022564 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP- 123 (295)
Q Consensus 47 ~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~- 123 (295)
+.++|+.++++ +|+.+++++.+.+.. . ..|+. ....+ +|+.++++++++++ +|++|+|++
T Consensus 21 ~~i~l~~~~~~~~~p~~~~~a~~~~~~~-~-~~y~~-------~~~~~----lr~~ia~~~~~~~~----~i~it~Ga~~ 83 (356)
T PRK08056 21 QLLDFSANINPLGMPVSLKRAIIDNLDC-A-ERYPD-------VEYRH----LHQALARHHQVPAS----WILAGNGETE 83 (356)
T ss_pred hEEEeccccCCCCCCHHHHHHHHHHHHh-c-ccCcC-------ccHHH----HHHHHHHHhCcChh----hEEECCCHHH
Confidence 45889988885 688999999876653 1 12222 12233 55788888899886 899999999
Q ss_pred HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCC-CCCCCCHHHHHHHHhhcCCcEEEEc
Q 022564 124 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE-STGYIDYDQLEKSATLFRPKLIVAG 202 (295)
Q Consensus 124 a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~id~e~l~~~i~~~~tk~i~l~ 202 (295)
++..++.++ .+|+ +++.+|. |..+...+...|.++..++ .+. +++.+| +++++.+.+ ++|+|+++
T Consensus 84 ~l~~~~~~l-~~g~-viv~~P~--------y~~~~~~~~~~g~~~~~v~--~~~~~~~~~~-~~~~~~~~~-~~k~v~l~ 149 (356)
T PRK08056 84 SIFAVVSGL-KPRR-AMIVTPG--------FAEYRRALQQVGCEIRRYS--LREADGWQLT-DAILEALTP-DLDCLFLC 149 (356)
T ss_pred HHHHHHHHh-CCCC-EEEeCCC--------cHHHHHHHHHcCCeEEEEe--cccccCCCcc-HHHHHhccC-CCCEEEEe
Confidence 766566665 7776 6666743 3333334446676565555 442 345666 455566664 89999998
Q ss_pred CCCCC--CccC---HHHHHHHHHHcCCEEEEEccccccccccC------CCCCCCCcceEEEeCCCCCCCCC--ceEEEE
Q 022564 203 ASAYA--RLYD---YERIRKVCNKQKAIMLADMAHISGLVAAG------VIPSPFEYADVVTTTTHKSLRGP--RGAMIF 269 (295)
Q Consensus 203 ~~n~~--~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~------~~~~~~~~~D~~~~s~~K~l~gp--~gG~l~ 269 (295)
.+||| ...+ +++|+++|++++++||+|+++.. ....+ .... ..++++.|++|+|+.| +-|+++
T Consensus 150 ~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~-~~~~~~~~~~~~~~~---~~~i~~~S~SK~~~~~G~RiG~~v 225 (356)
T PRK08056 150 TPNNPTGLLPERQLLQAIAERCKSLNIALILDEAFID-FIPDETGFIPQLADN---PHLWVLRSLTKFYAIPGLRLGYLV 225 (356)
T ss_pred CCcCCCCCCCCHHHHHHHHHHHHhcCCEEEEecchhc-cCCcchHHHHHhccC---CCEEEEEechhhccCcchhheeee
Confidence 66664 5555 78899999999999999999532 11111 1111 2668899999988534 339999
Q ss_pred EeC
Q 022564 270 FRK 272 (295)
Q Consensus 270 ~~~ 272 (295)
..+
T Consensus 226 ~~~ 228 (356)
T PRK08056 226 NSD 228 (356)
T ss_pred cCC
Confidence 853
No 203
>PRK03321 putative aminotransferase; Provisional
Probab=99.72 E-value=5.9e-17 Score=146.70 Aligned_cols=201 Identities=17% Similarity=0.119 Sum_probs=138.4
Q ss_pred cCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-
Q 022564 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP- 123 (295)
Q Consensus 47 ~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~- 123 (295)
+.|+|..+++. +++.+.+++.+.+.. . ..|+. .+..+ +++.++++++++++ +|++++|++
T Consensus 23 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~-~-~~y~~-------~g~~~----lr~~ia~~~~~~~~----~I~~~~G~~~ 85 (352)
T PRK03321 23 GAIKLSSNETPFGPLPSVRAAIARAAAG-V-NRYPD-------MGAVE----LRAALAEHLGVPPE----HVAVGCGSVA 85 (352)
T ss_pred cceeccCCCCCCCCCHHHHHHHHHHHHh-c-CcCCC-------CcHHH----HHHHHHHHhCcCHH----HEEECCCHHH
Confidence 35888888763 677899999887643 1 12321 23344 44778888888876 899999999
Q ss_pred HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcC
Q 022564 124 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGA 203 (295)
Q Consensus 124 a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~ 203 (295)
++..++.+++++||+|+++.+.|..+ ...++..|.++. +++.+ +++.+|++++++++++ ++++++++.
T Consensus 86 ~l~~~~~~~~~~gd~Vli~~p~y~~~--------~~~~~~~g~~~~--~v~~~-~~~~~~~~~l~~~~~~-~~~~v~l~~ 153 (352)
T PRK03321 86 LCQQLVQATAGPGDEVIFAWRSFEAY--------PILVQVAGATPV--QVPLT-PDHTHDLDAMAAAITD-RTRLIFVCN 153 (352)
T ss_pred HHHHHHHHhcCCCCEEEeCCCCHHHH--------HHHHHHcCCEEE--EccCC-CCCCCCHHHHHHhhcc-CCCEEEEeC
Confidence 66667788899999999988544332 112334564444 44454 3478999999999976 899999875
Q ss_pred CCC--CCccCHHHHHHHHHH--cCCEEEEEccccccccccCCCCCCCC-----cceEEEeCCCCCCC--CCceEEEEEeC
Q 022564 204 SAY--ARLYDYERIRKVCNK--QKAIMLADMAHISGLVAAGVIPSPFE-----YADVVTTTTHKSLR--GPRGAMIFFRK 272 (295)
Q Consensus 204 ~n~--~~~~~l~~I~~ia~~--~~~~vivD~a~~~g~~~~~~~~~~~~-----~~D~~~~s~~K~l~--gp~gG~l~~~~ 272 (295)
++| |...+.++|.++|++ +++++++|+++...... +....++. .--+++.|++|.|+ |-+.|++++++
T Consensus 154 p~NPtG~~~~~~~l~~l~~~~~~~~~ii~De~y~~~~~~-~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~ 232 (352)
T PRK03321 154 PNNPTGTVVTPAELARFLDAVPADVLVVLDEAYVEYVRD-DDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGHP 232 (352)
T ss_pred CCCCcCCCcCHHHHHHHHHhCCCCeEEEEechHHHhccC-cCCCcHHHHHhhCCCEEEEecchHHhhhHHHhhhhhcCCH
Confidence 555 478899999999987 59999999997533221 11111110 12367889999885 33459999987
Q ss_pred Cchhh
Q 022564 273 GVKEI 277 (295)
Q Consensus 273 ~~~~~ 277 (295)
++.+.
T Consensus 233 ~~~~~ 237 (352)
T PRK03321 233 EVIAA 237 (352)
T ss_pred HHHHH
Confidence 76554
No 204
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.72 E-value=1.9e-16 Score=147.20 Aligned_cols=204 Identities=10% Similarity=0.049 Sum_probs=134.3
Q ss_pred CceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-H
Q 022564 48 GLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-S 124 (295)
Q Consensus 48 ~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a 124 (295)
.++|..+.+. ++|.+.+++.+..... ..|+...+..++++++.+++.+..+ +++ +|++|+|++ +
T Consensus 87 ~i~L~~g~p~~~~~p~~~~~~~~~~~~~--------~~Y~~~~g~~~lr~~ia~~~~~~~~-~~~----~Iiit~G~~~a 153 (431)
T PRK15481 87 LHDLAGGNPDPQRLPDLSRYFARLSRTP--------RLYGDAPVSPELHAWAARWLRDDCP-VAF----EIDLTSGAIDA 153 (431)
T ss_pred hhhhhcCCCChhHhHHHHHHHHHhhhhh--------hhcCCcCCCHHHHHHHHHHHhhccC-CcC----eEEEecCcHHH
Confidence 4677666543 2355666666543321 1244445556677666666554332 233 899999999 8
Q ss_pred HHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEc-C
Q 022564 125 NFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-A 203 (295)
Q Consensus 125 ~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~-~ 203 (295)
+..++.++++|||.|++++|.|+.+ ...+...|.++..++ ++ ++ .+|++++++++++ ++|+++++ +
T Consensus 154 l~~~~~~l~~pgd~Vlv~~P~y~~~--------~~~~~~~g~~~~~v~--~~-~~-g~~~~~l~~~~~~-~~k~i~~~p~ 220 (431)
T PRK15481 154 IERLLCAHLLPGDSVAVEDPCFLSS--------INMLRYAGFSASPVS--VD-AE-GMQPEKLERALAQ-GARAVILTPR 220 (431)
T ss_pred HHHHHHHhCCCCCEEEEeCCCcHHH--------HHHHHHcCCeEEeec--cC-CC-CCCHHHHHHHHhc-CCCEEEECCC
Confidence 8878899999999999999555444 334456675554444 54 22 4899999999976 89999886 6
Q ss_pred CCCC--CccCHH---HHHHHHHHc-CCEEEEEccccccccccCCCCCCCC-cceEEEeCCCCCCCCC--ceEEEEEeCCc
Q 022564 204 SAYA--RLYDYE---RIRKVCNKQ-KAIMLADMAHISGLVAAGVIPSPFE-YADVVTTTTHKSLRGP--RGAMIFFRKGV 274 (295)
Q Consensus 204 ~n~~--~~~~l~---~I~~ia~~~-~~~vivD~a~~~g~~~~~~~~~~~~-~~D~~~~s~~K~l~gp--~gG~l~~~~~~ 274 (295)
+||| ...+.+ +|.++|++| +++||+|+++..-.........+.. ..-+++.|++|.|+ | +-|+++.++++
T Consensus 221 p~NPTG~~~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~-~GlRiG~~i~~~~~ 299 (431)
T PRK15481 221 AHNPTGCSLSARRAAALRNLLARYPQVLVIIDDHFALLSSSPYHSVIPQTTQRWALIRSVSKALG-PDLRLAFVASDSAT 299 (431)
T ss_pred CCCCCCccCCHHHHHHHHHHHHhcCCceEEecCchhhhccCCCCCCCcCCCCCEEEEeeeccccC-CCceeEEEeCCHHH
Confidence 7775 555554 999999999 9999999996532211100001101 13488999999886 4 23999998776
Q ss_pred hhhh
Q 022564 275 KEIN 278 (295)
Q Consensus 275 ~~~~ 278 (295)
.+..
T Consensus 300 ~~~~ 303 (431)
T PRK15481 300 SARL 303 (431)
T ss_pred HHHH
Confidence 5543
No 205
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.72 E-value=1e-16 Score=146.36 Aligned_cols=153 Identities=20% Similarity=0.190 Sum_probs=112.5
Q ss_pred HHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeec
Q 022564 97 CQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL 175 (295)
Q Consensus 97 ~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 175 (295)
+++.++++.|.+ ++++++|++ ++.+++.+++++||+|+++.+.|++.+....... ...+..+ .. .
T Consensus 56 le~~lA~l~g~~------~v~~~~gg~~Ai~~~l~all~~GD~Vl~~~p~y~~~~~~~~~~~----~~~~~~v--~~--~ 121 (382)
T TIGR02080 56 LQQALAELEGGA------GAVVTNTGMSAIHLVTTALLGPDDLLVAPHDCYGGTYRLLNALA----KKGCFRV--LF--V 121 (382)
T ss_pred HHHHHHHHhCCC------cEEEEcCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHH----hhcCeEE--EE--E
Confidence 448888888842 567777777 8887888999999999999988876544322111 1112222 21 1
Q ss_pred CCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCC-cceEE
Q 022564 176 NESTGYIDYDQLEKSATLFRPKLIVAGASAYA--RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE-YADVV 252 (295)
Q Consensus 176 ~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~~--~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~-~~D~~ 252 (295)
+ ..|++++++++++ +||+|+++.++|| ...|+++|.++|+++|+++++|++++.+.... ++. ++|++
T Consensus 122 d----~~d~~~l~~ai~~-~tklV~l~~p~NPtG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~~-----pl~~gaDiv 191 (382)
T TIGR02080 122 D----QGDEQALRAALAQ-KPKLVLIETPSNPLLRVVDIAKICHLAKAVGAVVVVDNTFLSPALQN-----PLALGADLV 191 (382)
T ss_pred C----CCCHHHHHHhcCc-CceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCcccccCC-----chhhCCCEE
Confidence 2 2489999999987 8999999866664 78899999999999999999999987664322 222 58999
Q ss_pred EeCCCCCCCCCc---eEEEEEeCC
Q 022564 253 TTTTHKSLRGPR---GAMIFFRKG 273 (295)
Q Consensus 253 ~~s~~K~l~gp~---gG~l~~~~~ 273 (295)
+.|++|+++|+. +|++.+++.
T Consensus 192 v~S~sK~l~G~~~~~~G~i~~~~~ 215 (382)
T TIGR02080 192 LHSCTKYLNGHSDVIAGAVIAKDP 215 (382)
T ss_pred EeecceeccCCCCceeEEEEeCCH
Confidence 999999998875 487777543
No 206
>PLN02590 probable tyrosine decarboxylase
Probab=99.72 E-value=3.4e-16 Score=147.25 Aligned_cols=180 Identities=14% Similarity=0.056 Sum_probs=123.5
Q ss_pred CCcchHHHHHHHHHHHHHHHcCCCCCCcc---eeEEeCCChH-HHHHHHHhh----cC-------CCCeEEEecCCCCcc
Q 022564 85 GGNEYIDMAESLCQKRALEAFRLDPEKWG---VNVQSLSGSP-SNFQVYTAL----LK-------PHDRIMALDLPHGGH 149 (295)
Q Consensus 85 ~~~~~~~~l~~~~~~~la~~~g~~~~~~~---~~v~~~sG~~-a~~~~~~al----~~-------~gd~Vl~~~~~~~~~ 149 (295)
..++...++|+.+.+|+++++|.+...|. ..-++++|++ +++.++.+. .+ +.-.|++++..|.++
T Consensus 163 ~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv 242 (539)
T PLN02590 163 LTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSSF 242 (539)
T ss_pred ccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchHHH
Confidence 34566788999999999999999753110 1345667777 777655443 11 111344455445544
Q ss_pred cCccccccccccccceee---eEEEeeecCC-CCCCCCHHHHHHHHhhc-----CCcEEEEc--CCCCCCccCHHHHHHH
Q 022564 150 LSHGYQTDTKKISAVSIF---FETMPYRLNE-STGYIDYDQLEKSATLF-----RPKLIVAG--ASAYARLYDYERIRKV 218 (295)
Q Consensus 150 ~~~~~~~~~~~~~~~g~~---~~~v~~~~~~-~~~~id~e~l~~~i~~~-----~tk~i~l~--~~n~~~~~~l~~I~~i 218 (295)
.. ++.+.|.. ++.+| ++. +++.+|+++|+++|++. .|-+|+.+ .++.|...|+++|+++
T Consensus 243 ~K--------Aa~ilGlg~~~vr~Vp--~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i 312 (539)
T PLN02590 243 RK--------ACLIGGIHEENIRLLK--TDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNI 312 (539)
T ss_pred HH--------HHHHcCCCcccEEEEe--CCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCCHHHHHHH
Confidence 32 44566652 44455 443 35799999999999652 13344444 5666899999999999
Q ss_pred HHHcCCEEEEEccccccccccCCC---CCCCCcceEEEeCCCCCCCCCce-EEEEEeCCc
Q 022564 219 CNKQKAIMLADMAHISGLVAAGVI---PSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGV 274 (295)
Q Consensus 219 a~~~~~~vivD~a~~~g~~~~~~~---~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~~ 274 (295)
|++||+|++||+|++......... ..++..+|.++.++|||+..|.+ |++++|+..
T Consensus 313 ~~~~g~WlHVDaA~GG~al~~~~~r~~~~Gie~ADSit~D~HK~l~~p~~cg~llvr~~~ 372 (539)
T PLN02590 313 AKKYGIWLHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLFANQTCSPLWVKDRY 372 (539)
T ss_pred HHHhCCeEEEecchhhhhhcChhhHHHhcCCccCCEEEECchhhcCcCcCEEEEEecCHH
Confidence 999999999999977655443221 12345699999999999999999 999999863
No 207
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.71 E-value=6.5e-17 Score=147.34 Aligned_cols=155 Identities=14% Similarity=0.083 Sum_probs=112.9
Q ss_pred HHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecC
Q 022564 97 CQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 176 (295)
Q Consensus 97 ~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 176 (295)
+++.++.+-+.+. .++++||+.|+.+++.+++++||+|+++++.|+++..... ..+...|.++..+ +.+
T Consensus 69 Le~~la~le~~~~-----~v~~sSG~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~~----~~l~~~Gi~v~~v--d~~ 137 (395)
T PRK05967 69 LCKAIDALEGSAG-----TILVPSGLAAVTVPFLGFLSPGDHALIVDSVYYPTRHFCD----TMLKRLGVEVEYY--DPE 137 (395)
T ss_pred HHHHHHHHhCCCC-----EEEECcHHHHHHHHHHHhcCCCCEEEEccCCcHHHHHHHH----HHHHhcCeEEEEe--CCC
Confidence 4477777766554 7899898888888999999999999999987777643221 1122345444333 211
Q ss_pred CCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCC-cceEEE
Q 022564 177 ESTGYIDYDQLEKSATLFRPKLIVAGASAYA--RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE-YADVVT 253 (295)
Q Consensus 177 ~~~~~id~e~l~~~i~~~~tk~i~l~~~n~~--~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~-~~D~~~ 253 (295)
+.+++++++++ +||+|+++.++|| ...|+++|+++|+++|+++++|++++.+... .|+. |+|+++
T Consensus 138 ------~~e~l~~al~~-~TklV~lesPsNP~l~v~dl~~I~~la~~~g~~vvVD~t~a~p~~~-----~pl~~GaDivv 205 (395)
T PRK05967 138 ------IGAGIAKLMRP-NTKVVHTEAPGSNTFEMQDIPAIAEAAHRHGAIVMMDNTWATPLYF-----RPLDFGVDISI 205 (395)
T ss_pred ------CHHHHHHhcCc-CceEEEEECCCCCCCcHHHHHHHHHHHHHhCCEEEEECCccCceec-----ChhHcCCCEEE
Confidence 45789999987 8999999854443 8889999999999999999999997654222 2232 599999
Q ss_pred eCCCCCCCCCce---EEEEEeCCc
Q 022564 254 TTTHKSLRGPRG---AMIFFRKGV 274 (295)
Q Consensus 254 ~s~~K~l~gp~g---G~l~~~~~~ 274 (295)
.|.+|+++|... |++..+++.
T Consensus 206 ~S~tKy~~Gh~d~~~G~v~~~~~~ 229 (395)
T PRK05967 206 HAATKYPSGHSDILLGTVSANEKC 229 (395)
T ss_pred EecccccCCCCCeeEEEEEcCHHH
Confidence 999999887553 766666543
No 208
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.71 E-value=2.2e-16 Score=145.65 Aligned_cols=208 Identities=12% Similarity=0.081 Sum_probs=131.7
Q ss_pred HcCceecCCCC---CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcC--CCCCCcceeEE--e
Q 022564 46 WKGLELIPSEN---FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR--LDPEKWGVNVQ--S 118 (295)
Q Consensus 46 ~~~i~L~~~~~---~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g--~~~~~~~~~v~--~ 118 (295)
.+.++|..|++ .+++.+.+++.+++..... ......|+...+..++++++.+++.+..+ ++++ +|. .
T Consensus 29 ~~~i~l~~g~~~~~~~~~~~~~~~~~a~~~~~~--~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~----~v~~~~ 102 (404)
T PTZ00376 29 PSKVNLGIGAYRDENGKPYVLESVRKAEKIIAE--KNLDKEYLPIEGLQSFIEAAQKLLFGEASYALAEK----RIATVQ 102 (404)
T ss_pred cccEecccceeECCCCCEehhhHHHHHHHHhcc--ccCCCCCCCCCCCHHHHHHHHHHhcCCCccccccC----eEEEee
Confidence 46689988863 2344455555555422110 01113366777888999888888765543 3555 666 4
Q ss_pred CCChH-HHHHHH---HhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhh-
Q 022564 119 LSGSP-SNFQVY---TALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL- 193 (295)
Q Consensus 119 ~sG~~-a~~~~~---~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~- 193 (295)
|.|++ +...++ .++++|||+|++++|.|+.+ ...+...|.++..+++. +++++.+|++.++++++.
T Consensus 103 t~G~~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~--------~~~~~~~G~~~~~v~l~-~~~~~~~d~~~l~~~~~~~ 173 (404)
T PTZ00376 103 ALSGTGALRLGFEFLKRFLPAGTTVYVSNPTWPNH--------VNIFKSAGLNVKEYRYY-DPKTKGLDFDGMLEDLRTA 173 (404)
T ss_pred ccCcchHHHHHHHHHHHhcCCCCEEEEcCCCchhH--------HHHHHHcCCceeecccc-CcccCCcCHHHHHHHHHhC
Confidence 77877 555443 46789999999999544444 44555777666555431 224578999999999863
Q ss_pred -cCCcEEEEcCCCCC-----CccCHHHHHHHHHHcCCEEEEEccccccccccCC--CC---CCCC---cceEEEeCCCCC
Q 022564 194 -FRPKLIVAGASAYA-----RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGV--IP---SPFE---YADVVTTTTHKS 259 (295)
Q Consensus 194 -~~tk~i~l~~~n~~-----~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~--~~---~~~~---~~D~~~~s~~K~ 259 (295)
.++++++++++||| ....+++|+++|++|+++||+|+++.. ....+. .. ..+. ..-+++.|++|.
T Consensus 174 ~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~-~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~ 252 (404)
T PTZ00376 174 PNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQG-FASGDLDKDAYAIRLFAERGVEFLVAQSFSKN 252 (404)
T ss_pred CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcC-ccCCCHHHHHHHHHHHHhcCCcEEEEEeCCCc
Confidence 24566666766664 444677889999999999999999542 221110 00 0000 123788999998
Q ss_pred CC--CCceEEEE
Q 022564 260 LR--GPRGAMIF 269 (295)
Q Consensus 260 l~--gp~gG~l~ 269 (295)
|+ |.+-|+++
T Consensus 253 ~~~~GlRvG~~~ 264 (404)
T PTZ00376 253 MGLYGERIGALH 264 (404)
T ss_pred ccccccccceEE
Confidence 85 55669984
No 209
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.71 E-value=1.1e-16 Score=145.25 Aligned_cols=156 Identities=15% Similarity=0.164 Sum_probs=109.7
Q ss_pred chHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceee
Q 022564 88 EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIF 167 (295)
Q Consensus 88 ~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~ 167 (295)
+...+++ +.++++.|.+. .+.+.+|..|+.+++ .++++||+|+++.+.|++.......... ..+
T Consensus 54 p~~~~le----~~lA~leg~~~-----~v~~~sG~aAi~~~l-~~l~~GD~VI~~~~~yg~~~~~~~~~~~----~~~-- 117 (364)
T PRK07269 54 PTRAKLE----ETLAAIESADY-----ALATSSGMSAIVLAF-SVFPVGSKVVAVRDLYGGSFRWFNQQEK----EGR-- 117 (364)
T ss_pred ccHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHHH-HHhCCCCEEEEecCCcCchHHHHHHHHh----cCc--
Confidence 3445555 78888888653 455555555777566 5689999999998777655321110000 001
Q ss_pred eEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCC
Q 022564 168 FETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYA--RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP 245 (295)
Q Consensus 168 ~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~~--~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~ 245 (295)
+. . ++..|++++++++++ +||+|+++.++|| ...|+++|+++|+++|+++++|++++.+... .+
T Consensus 118 ---~~--~---~~~~d~~~l~~~i~~-~TklV~lesP~NPtg~~~di~~I~~la~~~gi~vvvD~t~~~~~~~-----~p 183 (364)
T PRK07269 118 ---FH--F---TYANTEEELIAAIEE-DTDIVYIETPTNPLMVEFDIEKVAKLAHAKGAKVIVDNTFYSPIYQ-----RP 183 (364)
T ss_pred ---EE--E---EecCCHHHHHHhcCc-CceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccC-----Cc
Confidence 11 1 134689999999987 8999999866664 7789999999999999999999997654322 22
Q ss_pred CC-cceEEEeCCCCCCCCCc---eEEEEEeCC
Q 022564 246 FE-YADVVTTTTHKSLRGPR---GAMIFFRKG 273 (295)
Q Consensus 246 ~~-~~D~~~~s~~K~l~gp~---gG~l~~~~~ 273 (295)
+. ++|++++|++|+++|+. ||+++++++
T Consensus 184 l~~gaDivv~S~tK~l~g~~d~~gG~v~~~~~ 215 (364)
T PRK07269 184 IELGADIVLHSATKYLSGHNDVLAGVVVTNDL 215 (364)
T ss_pred hhhCCcEEEecCceeccCCCcccceEEEeCcH
Confidence 33 69999999999998866 588888653
No 210
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.71 E-value=2e-16 Score=146.22 Aligned_cols=154 Identities=16% Similarity=0.159 Sum_probs=113.6
Q ss_pred HHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecC
Q 022564 97 CQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 176 (295)
Q Consensus 97 ~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 176 (295)
+++.++++.|.+. .+++++|+.|+.+++.+++++||+|+++.+.|++.+..... .+...|..+ ..+ +
T Consensus 63 Le~~lA~l~g~~~-----~l~~ssG~~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~~~~~----~l~~~gi~v--~~~--d 129 (425)
T PRK06084 63 LEQRVAALEGGVG-----ALAVASGMAAITYAIQTIAEAGDNIVSVAKLYGGTYNLLAH----TLPRIGIET--RFA--A 129 (425)
T ss_pred HHHHHHHHhCCCc-----eeEehhHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHH----hcccceeEE--EEE--C
Confidence 4488888888754 67888888888878899999999999999877765432211 111234222 221 2
Q ss_pred CCCCCCCHHHHHHHHhhcCCcEEEEcCCCC--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCC-cceEEE
Q 022564 177 ESTGYIDYDQLEKSATLFRPKLIVAGASAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE-YADVVT 253 (295)
Q Consensus 177 ~~~~~id~e~l~~~i~~~~tk~i~l~~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~-~~D~~~ 253 (295)
..|++++++++++ +|++|+++.++| +...|+++|.++|+++|+++++|++|+.+.... ++. ++|+++
T Consensus 130 ----~~d~e~le~ai~~-~tklV~lesp~NPtG~v~dl~~I~~la~~~~i~vVvD~a~a~~~~~~-----p~~~gaDivv 199 (425)
T PRK06084 130 ----HDDIAALEALIDE-RTKAVFCESIGNPAGNIIDIQALADAAHRHGVPLIVDNTVATPVLCR-----PFEHGADIVV 199 (425)
T ss_pred ----CCCHHHHHHHhcc-CCcEEEEeCCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccCC-----hhhcCCCEEE
Confidence 2489999999987 899999974444 478899999999999999999999998665422 222 599999
Q ss_pred eCCCCCCCCCc---eEEEEEeCC
Q 022564 254 TTTHKSLRGPR---GAMIFFRKG 273 (295)
Q Consensus 254 ~s~~K~l~gp~---gG~l~~~~~ 273 (295)
+|++|+++|+. ||+++.+..
T Consensus 200 ~S~tK~l~G~g~~~gG~v~~~~~ 222 (425)
T PRK06084 200 HSLTKYIGGHGTSIGGIVVDSGK 222 (425)
T ss_pred ECchhcccccccceeEEEEeCCc
Confidence 99999998875 466655443
No 211
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.71 E-value=1.5e-16 Score=144.71 Aligned_cols=152 Identities=17% Similarity=0.199 Sum_probs=112.8
Q ss_pred HHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecC
Q 022564 97 CQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 176 (295)
Q Consensus 97 ~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 176 (295)
+++.++++.|++. .+++++|+.++..+ .+++++||+|+++++.|++...... ..+...|.++..+ +
T Consensus 57 le~~la~l~g~~~-----~~~~~sG~~ai~~~-~~ll~~Gd~Vl~~~~~y~~t~~~~~----~~~~~~G~~v~~v--d-- 122 (366)
T PRK08247 57 LEQAIADLEGGDQ-----GFACSSGMAAIQLV-MSLFRSGDELIVSSDLYGGTYRLFE----EHWKKWNVRFVYV--N-- 122 (366)
T ss_pred HHHHHHHHhCCCc-----EEEEcCHHHHHHHH-HHHhCCCCEEEEecCCcCcHHHHHH----HHhhccCceEEEE--C--
Confidence 4488999999976 68888887777744 4688999999999988776533221 1122345434333 2
Q ss_pred CCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCC-cceEEE
Q 022564 177 ESTGYIDYDQLEKSATLFRPKLIVAGASAYA--RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE-YADVVT 253 (295)
Q Consensus 177 ~~~~~id~e~l~~~i~~~~tk~i~l~~~n~~--~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~-~~D~~~ 253 (295)
..|++++++++++ +|++|+++.|+|| ...++++|+++|++||+++|+|++++.+.... ++. ++|+++
T Consensus 123 ----~~d~~~l~~~i~~-~tklv~le~P~NP~~~~~dl~~I~~la~~~g~~lIvD~t~~~~~~~~-----p~~~g~di~i 192 (366)
T PRK08247 123 ----TASLKAIEQAITP-NTKAIFIETPTNPLMQETDIAAIAKIAKKHGLLLIVDNTFYTPVLQR-----PLEEGADIVI 192 (366)
T ss_pred ----CCCHHHHHHhccc-CceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccccccC-----chhcCCcEEE
Confidence 2389999999987 8999999866665 67899999999999999999999986543322 222 599999
Q ss_pred eCCCCCCCCC---ceEEEEEeC
Q 022564 254 TTTHKSLRGP---RGAMIFFRK 272 (295)
Q Consensus 254 ~s~~K~l~gp---~gG~l~~~~ 272 (295)
.|++|+++|+ .+|++..++
T Consensus 193 ~S~sK~~~g~~d~~~G~iv~~~ 214 (366)
T PRK08247 193 HSATKYLGGHNDVLAGLVVAKG 214 (366)
T ss_pred eecceeccCCCceeeeEEecCh
Confidence 9999999887 458888763
No 212
>PLN02672 methionine S-methyltransferase
Probab=99.71 E-value=4.1e-16 Score=155.19 Aligned_cols=208 Identities=9% Similarity=0.004 Sum_probs=141.5
Q ss_pred cCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-
Q 022564 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP- 123 (295)
Q Consensus 47 ~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~- 123 (295)
+.|+|..|+++ +|+.+++++.+.+.. .. + .+ +..++++++++++++.+|++.+.. .+|++++|++
T Consensus 698 ~vI~LsinE~d~ppPp~V~eAi~eal~~-~~--~----s~----g~pdlr~aLa~~la~~~Gv~~d~~-e~IIvt~Gs~e 765 (1082)
T PLN02672 698 SLIHMDVDESFLPVPSAVKASIFESFVR-QN--I----SE----SETDPRPSILQFIKSNYGFPTDSC-TEFVYGDTSLA 765 (1082)
T ss_pred CEEEEeCCCCCCCCCHHHHHHHHHHHhh-cC--C----CC----CChHHHHHHHHHHHHHhCcCCCCC-CEEEEeCCHHH
Confidence 56899999884 688999999887644 11 1 01 123456778899999999855310 1799999999
Q ss_pred HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCC-CCCCCCHHHHHHHHhhcCCcEEEEc
Q 022564 124 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE-STGYIDYDQLEKSATLFRPKLIVAG 202 (295)
Q Consensus 124 a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~id~e~l~~~i~~~~tk~i~l~ 202 (295)
++..++.++++|||.|+++. |.|..|...+...|.++..++ ++. +++.+|++++++++++.+.++|+++
T Consensus 766 lL~lll~aLl~pGD~VLVp~--------PtY~~Y~~~a~~~Ga~vv~Vp--l~~e~gf~lD~d~Le~al~~~~~~~I~L~ 835 (1082)
T PLN02672 766 LFNKLVLCCVQEGGTLCFPA--------GSNGTYVSAAKFLKANFRRIP--TKSSDGFKLTAKTLASTLETVKKPWVYIS 835 (1082)
T ss_pred HHHHHHHHHcCCCCEEEEeC--------CChHHHHHHHHHcCCEEEEEe--cccccCCCCCHHHHHHHhccCCCCEEEEE
Confidence 66668899999999999999 455544445667786665555 442 4679999999999865234577776
Q ss_pred CCC-CC-----CccCHHHHHHHHHHcCCEEEEEccccccccccCCC-CCCC-------Cc-----ceEEEeCCCCCCC--
Q 022564 203 ASA-YA-----RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI-PSPF-------EY-----ADVVTTTTHKSLR-- 261 (295)
Q Consensus 203 ~~n-~~-----~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~-~~~~-------~~-----~D~~~~s~~K~l~-- 261 (295)
+|| || ....+++|+++|++||++||+|++++.-....... ...+ .. .-+++.|++|.++
T Consensus 836 nPnhNPTG~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lp 915 (1082)
T PLN02672 836 GPTINPTGLLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSG 915 (1082)
T ss_pred CcCCCCcCccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccH
Confidence 554 53 34467788999999999999999975222211100 0000 00 1256789998664
Q ss_pred CCceEEEEEeCC-chh
Q 022564 262 GPRGAMIFFRKG-VKE 276 (295)
Q Consensus 262 gp~gG~l~~~~~-~~~ 276 (295)
|.+-|++++.++ +.+
T Consensus 916 GLRIGylIap~~eLi~ 931 (1082)
T PLN02672 916 GHEFGFLALNDSVLID 931 (1082)
T ss_pred HHHheeEEeCCHHHHH
Confidence 445599999765 444
No 213
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.70 E-value=2.5e-16 Score=154.56 Aligned_cols=171 Identities=15% Similarity=0.107 Sum_probs=127.8
Q ss_pred chHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhh-c-------CCCCeEEEecCCCCcccCcccccccc
Q 022564 88 EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTAL-L-------KPHDRIMALDLPHGGHLSHGYQTDTK 159 (295)
Q Consensus 88 ~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al-~-------~~gd~Vl~~~~~~~~~~~~~~~~~~~ 159 (295)
++..++..++++|+++++|.+. +.+...+|+.+..+.++++ . ...+.|+++...|+.+...
T Consensus 526 qG~lq~i~elq~~l~eltGmd~----~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPas------- 594 (939)
T TIGR00461 526 EGYQELIAQLEKWLCSITGFDA----ISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPAS------- 594 (939)
T ss_pred HHHHHHHHHHHHHHHHHHCCCC----cccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHHH-------
Confidence 4466777788899999999986 3777777777665444444 1 2346899999999887432
Q ss_pred ccccceeeeEEEeeecCCCCCCCCHHHHHHHHhh--cCCcEEEEc-CCCCCCccC-HHHHHHHHHHcCCEEEEEcccccc
Q 022564 160 KISAVSIFFETMPYRLNESTGYIDYDQLEKSATL--FRPKLIVAG-ASAYARLYD-YERIRKVCNKQKAIMLADMAHISG 235 (295)
Q Consensus 160 ~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~--~~tk~i~l~-~~n~~~~~~-l~~I~~ia~~~~~~vivD~a~~~g 235 (295)
+...|.+++.++ .+ +++.+|+++|++++++ .++++|+++ +++.|...+ +++|+++||++|.++++|+||..+
T Consensus 595 -a~~~G~~Vv~V~--~d-~~G~iDle~L~~~i~~~~~~taaV~iT~pst~G~~e~~I~eI~~iah~~G~~v~VDgAq~~a 670 (939)
T TIGR00461 595 -AAMAGMQVVPVN--CD-QDGNIDLVDLKNKAEQHGDELAAVMVTYPSTHGVFEPTIQHACDIVHSFGGQVYLDGANMNA 670 (939)
T ss_pred -HHHCCCEEEEec--cC-CCCCcCHHHHHHHHhhcCCceEEEEEEeCCcCceecccHHHHHHHHHHcCCEEEEEecChhh
Confidence 235565555554 55 6789999999999974 378899887 555576666 999999999999999999999775
Q ss_pred ccccCCCCCCCCcceEEEeCCCCCCC-----CCce-EEEEEeCCch
Q 022564 236 LVAAGVIPSPFEYADVVTTTTHKSLR-----GPRG-AMIFFRKGVK 275 (295)
Q Consensus 236 ~~~~~~~~~~~~~~D~~~~s~~K~l~-----gp~g-G~l~~~~~~~ 275 (295)
...... ..-.|+|++++|+||+|+ |++| |++++++.+.
T Consensus 671 l~~l~~--Pg~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~L~ 714 (939)
T TIGR00461 671 QVGLTS--PGDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSHLI 714 (939)
T ss_pred CCCCCC--ccccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhhch
Confidence 554321 111259999999999998 6667 9999997643
No 214
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.70 E-value=5.1e-16 Score=139.84 Aligned_cols=200 Identities=18% Similarity=0.205 Sum_probs=144.7
Q ss_pred cCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcC-CCCCCcceeEEeCCChH
Q 022564 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR-LDPEKWGVNVQSLSGSP 123 (295)
Q Consensus 47 ~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g-~~~~~~~~~v~~~sG~~ 123 (295)
+.++|+.++|+ +|+.+++++.+.+.... .||.. ...+ +++.+++++| .+++ +|++++|++
T Consensus 23 ~~i~LssNenP~gp~~~~~~~~~~~~~~~~--rYPd~-------~~~~----l~~a~a~~~~~~~~~----~V~~gnGsd 85 (356)
T COG0079 23 GIIKLSSNENPYGPPPKVIEAIRAALDKLN--RYPDP-------DYRE----LRAALAEYYGVVDPE----NVLVGNGSD 85 (356)
T ss_pred cceeecCCCCCCCCCHHHHHHHHHHHHhhc--cCCCC-------cHHH----HHHHHHHHhCCCCcc----eEEEcCChH
Confidence 46899999997 46888888888765311 23331 1223 5588888999 6765 899999999
Q ss_pred -HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEc
Q 022564 124 -SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 202 (295)
Q Consensus 124 -a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~ 202 (295)
++..++++++.+||.|+++. |.|..|...+...|+++..++ .+ + +.+|++.+.+.+.+ ++++|++|
T Consensus 86 e~i~~l~~~~~~~gd~vl~~~--------Ptf~~Y~~~a~~~g~~~~~v~--~~-~-~~~d~~~~~~~~~~-~~~lv~i~ 152 (356)
T COG0079 86 ELIELLVRAFVEPGDTVLIPE--------PTFSMYEIAAQLAGAEVVKVP--LK-E-FRLDLDAILAAIRD-KTKLVFLC 152 (356)
T ss_pred HHHHHHHHHhhcCCCEEEEcC--------CChHHHHHHHHhcCCeEEEec--cc-c-cccCHHHHHHhhhc-CCCEEEEe
Confidence 88879999999999999999 666666666678887776665 44 3 89999999999987 89999999
Q ss_pred CCCCC--CccCHHHHHHHHHHc--CCEEEEEccccccccccCCCCCCCCcc--eEEEeCCCCCCC--CCceEEEEEeCCc
Q 022564 203 ASAYA--RLYDYERIRKVCNKQ--KAIMLADMAHISGLVAAGVIPSPFEYA--DVVTTTTHKSLR--GPRGAMIFFRKGV 274 (295)
Q Consensus 203 ~~n~~--~~~~l~~I~~ia~~~--~~~vivD~a~~~g~~~~~~~~~~~~~~--D~~~~s~~K~l~--gp~gG~l~~~~~~ 274 (295)
+|||| ...+.++|.++++.. +.+|++|+|.. ...+...... +... =+++=|++|.|+ |-+-|+.+.++++
T Consensus 153 nPNNPTG~~~~~~~l~~l~~~~~~~~~vVvDEAY~-eF~~~~~~~l-~~~~~nlivlRTfSKa~gLAGlRlGy~ia~~~~ 230 (356)
T COG0079 153 NPNNPTGTLLPREELRALLEALPEGGLVVIDEAYI-EFSPESSLEL-LKYPPNLIVLRTFSKAFGLAGLRVGYAIANPEL 230 (356)
T ss_pred CCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchh-hcCCchhhhh-ccCCCCEEEEEecHHhhhcchhceeeccCCHHH
Confidence 88885 677777777777654 88999999953 2222110000 0012 378899999764 4444999999887
Q ss_pred hhhh
Q 022564 275 KEIN 278 (295)
Q Consensus 275 ~~~~ 278 (295)
.+..
T Consensus 231 i~~l 234 (356)
T COG0079 231 IAAL 234 (356)
T ss_pred HHHH
Confidence 6543
No 215
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.70 E-value=4.9e-16 Score=141.04 Aligned_cols=195 Identities=15% Similarity=0.074 Sum_probs=128.7
Q ss_pred HcCceecCCCC--CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCC---CCCCcceeEEeCC
Q 022564 46 WKGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL---DPEKWGVNVQSLS 120 (295)
Q Consensus 46 ~~~i~L~~~~~--~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~---~~~~~~~~v~~~s 120 (295)
...++|..+++ ++++.+.+++.+.... . . |+...+..++++++.+++.+.+|. +++ +|++|+
T Consensus 21 ~~~i~l~~~~p~~~~~~~~~~~~~~~~~~-~--~------Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~----~I~it~ 87 (357)
T TIGR03539 21 DGIVDLSVGTPVDPVPPLIRAALAAAADA-P--G------YPQTWGTPELREAIVDWLERRRGVPGLDPT----AVLPVI 87 (357)
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHHhh-C--C------CCcccCCHHHHHHHHHHHHHhcCCCCCCcC----eEEEcc
Confidence 35688887765 3477888888765432 1 2 333455678888888988887664 455 899999
Q ss_pred ChH-HHHHHHHhh-cCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcE
Q 022564 121 GSP-SNFQVYTAL-LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKL 198 (295)
Q Consensus 121 G~~-a~~~~~~al-~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~ 198 (295)
|++ ++..++..+ +++||.|++++|.|+++.. .+...|.++ +++ + |+++++ ..++++
T Consensus 88 G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~--------~~~~~g~~~--~~v--~------~~~~l~----~~~~~~ 145 (357)
T TIGR03539 88 GTKELVAWLPTLLGLGPGDTVVIPELAYPTYEV--------GALLAGATP--VAA--D------DPTELD----PVGPDL 145 (357)
T ss_pred ChHHHHHHHHHHHcCCCCCEEEECCCCcHHHHH--------HHHhcCCEE--ecc--C------ChhhcC----ccCccE
Confidence 999 776677777 7999999999966655532 333455433 332 1 233332 237899
Q ss_pred EEEcCCCCC--Ccc---CHHHHHHHHHHcCCEEEEEccccccccccCCCCCCC-------C-cceEEEeCCCCCC--CCC
Q 022564 199 IVAGASAYA--RLY---DYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPF-------E-YADVVTTTTHKSL--RGP 263 (295)
Q Consensus 199 i~l~~~n~~--~~~---~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~-------~-~~D~~~~s~~K~l--~gp 263 (295)
|+++.++|| ... .+++|.++|++||+++|+|+++.. ....+.....+ . ...+++.|++|.| +|.
T Consensus 146 v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~-~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~ 224 (357)
T TIGR03539 146 IWLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYLE-LGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGY 224 (357)
T ss_pred EEEeCCCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchhh-hccCCCCccceecccCCCccccEEEEeccccccCCCce
Confidence 999855554 444 477899999999999999999752 11111110000 0 1248899999986 566
Q ss_pred ceEEEEEeCCchh
Q 022564 264 RGAMIFFRKGVKE 276 (295)
Q Consensus 264 ~gG~l~~~~~~~~ 276 (295)
++|++++++++.+
T Consensus 225 R~G~~i~~~~~~~ 237 (357)
T TIGR03539 225 RAGFVAGDPALVA 237 (357)
T ss_pred eEEEEecCHHHHH
Confidence 6799998776544
No 216
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.69 E-value=3.3e-16 Score=142.88 Aligned_cols=200 Identities=17% Similarity=0.153 Sum_probs=134.8
Q ss_pred cCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-
Q 022564 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP- 123 (295)
Q Consensus 47 ~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~- 123 (295)
+.++|..++++ +++.+.+++.+...... .|+ ...+ .+ +++.+++++|++++ +|++|+|++
T Consensus 37 ~~i~l~~~~~~~~~~~~~~~al~~~~~~~~--~Y~------~~~g-~~----lr~~ia~~~~~~~~----~i~~t~G~~~ 99 (371)
T PRK05166 37 RIAKLGSNENPLGPSPAVRRAFADIAELLR--LYP------DPQG-RA----LREAIAARTGVPAD----RIILGNGSED 99 (371)
T ss_pred ceEEcCCCCCCCCCCHHHHHHHHHHHHHhh--cCC------CCcH-HH----HHHHHHHHhCcCHH----HEEEcCCHHH
Confidence 56889888774 68888888876543211 222 2223 23 55778888899876 899999999
Q ss_pred HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcC
Q 022564 124 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGA 203 (295)
Q Consensus 124 a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~ 203 (295)
++..++.+++++||+|++..|.|+.+. ..+...|.++..+ +.+ +++.+|++++++.+++ +++++++++
T Consensus 100 ~l~~~~~~~~~~gd~vli~~P~y~~~~--------~~~~~~g~~~~~v--~~~-~~~~~~~~~l~~~~~~-~~~~v~l~~ 167 (371)
T PRK05166 100 LIAVICRAVLRPGDRVVTLYPSFPLHE--------DYPTMMGARVERV--TVT-PDLGFDLDALCAAVAR-APRMLMFSN 167 (371)
T ss_pred HHHHHHHHhcCCCCEEEEcCCChHHHH--------HHHHHcCCeEEEe--ecC-CCCCCCHHHHHHhhhc-CCCEEEEeC
Confidence 777678888999999999986555442 2333556555444 454 4578999999999977 899999886
Q ss_pred CCCC--CccCHHHHHHHHHH--cCCEEEEEccccccccccCCCCCCC---C---cceEEEeCCCCCCC--CCceEEEEEe
Q 022564 204 SAYA--RLYDYERIRKVCNK--QKAIMLADMAHISGLVAAGVIPSPF---E---YADVVTTTTHKSLR--GPRGAMIFFR 271 (295)
Q Consensus 204 ~n~~--~~~~l~~I~~ia~~--~~~~vivD~a~~~g~~~~~~~~~~~---~---~~D~~~~s~~K~l~--gp~gG~l~~~ 271 (295)
+||| ...+.+++.++++. ++++||+|+++..-. ..+..+..+ . ..-+++.|++|.|+ |.+-|+++..
T Consensus 168 p~NPtG~~~~~~~~~~l~~~~~~~~~ii~De~y~~~~-~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~ 246 (371)
T PRK05166 168 PSNPVGSWLTADQLARVLDATPPETLIVVDEAYAEYA-AGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVS 246 (371)
T ss_pred CCCCCCCCCCHHHHHHHHHhCCCCcEEEEECcHHHhc-CCcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecC
Confidence 6663 67777776666654 478999999965332 211111100 1 12378999999874 5555998764
Q ss_pred -CCchh
Q 022564 272 -KGVKE 276 (295)
Q Consensus 272 -~~~~~ 276 (295)
+++.+
T Consensus 247 ~~~l~~ 252 (371)
T PRK05166 247 DPELVG 252 (371)
T ss_pred CHHHHH
Confidence 44543
No 217
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.69 E-value=3.7e-16 Score=133.57 Aligned_cols=212 Identities=18% Similarity=0.181 Sum_probs=147.8
Q ss_pred HcCceecCCCC-CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHH
Q 022564 46 WKGLELIPSEN-FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPS 124 (295)
Q Consensus 46 ~~~i~L~~~~~-~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a 124 (295)
+..|-|..+.- ..|+.+.....+...+.|.++...+|..+...+ -.+-+.+-..++.+.|+.+. +++++.++++
T Consensus 30 ~~viyLdgnSLGa~p~~~~a~~~q~a~deW~~~lirsw~~a~~~W-~~lp~~lgdklApLiGA~~~----Evvv~dtts~ 104 (407)
T COG3844 30 GGVIYLDGNSLGARPRAVTARLQQVATDEWGEGLIRSWNKAKADW-FDLPERLGDKLAPLIGARAG----EVVVTDTTSI 104 (407)
T ss_pred CCeEEeeccccccCchHHHHHHHHHHHHHHHhhhhhhhcccCCch-hhchhHHHHHhhhhhcCCCC----ceEEeCCcch
Confidence 35566654332 346566666665555556555444444323222 33444567899999999887 7888888884
Q ss_pred HHH-HHHhh--cCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEE
Q 022564 125 NFQ-VYTAL--LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA 201 (295)
Q Consensus 125 ~~~-~~~al--~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l 201 (295)
|+. ++.+. ..+|+.|++++- .++.+-.|..+ ..+.+.+.. +++ .+.+.++++++++++ ++.+|++
T Consensus 105 nl~k~L~aalr~~~~r~vIv~E~--~~fpTdly~a~-g~~~~~~~~-----~~~---~~~~~P~~~~~~~~d-d~AvV~L 172 (407)
T COG3844 105 NLFKVLAAALRPQEGRRVIVSEG--DNFPTDLYIAE-GLADLLGIG-----YDL---EGVIAPRALEEAITD-DVAVVLL 172 (407)
T ss_pred HHHHHHHHHhccCCCceEEeecC--CCCCcchhhhc-chhhhhccc-----ccc---eeeeChHHHHHhhcc-ceEEEEe
Confidence 443 55555 456899998762 23322333222 123333322 111 246678899999988 8999999
Q ss_pred cCCCC--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCC-Cce-EEEEEeCCchhh
Q 022564 202 GASAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRG-PRG-AMIFFRKGVKEI 277 (295)
Q Consensus 202 ~~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~g-p~g-G~l~~~~~~~~~ 277 (295)
+..|+ |...++.+|.++||+||++++.|-||++|.++.+++..+ +|+.++|+||+|+| |.+ +++++.++..+.
T Consensus 173 ~~V~y~TGql~dm~aiT~~AH~~galv~wDLAHsaGavp~~Lh~~g---aDfaigcsyKYLNgGPGapa~l~v~~~h~e~ 249 (407)
T COG3844 173 SHVNYKTGQLLDMRAITALAHQHGALVGWDLAHSAGAVPVDLHAAG---ADFAIGCSYKYLNGGPGAPAGLFVAPRHRER 249 (407)
T ss_pred ccccccccceeeHHHHHHHHHhcCceEEeehhcccCCcceeecccC---CCeeeeeeceeccCCCCCceeEEeccccccc
Confidence 87777 699999999999999999999999999999999998887 99999999999965 555 999999887653
No 218
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.69 E-value=1.2e-15 Score=138.66 Aligned_cols=179 Identities=19% Similarity=0.168 Sum_probs=120.0
Q ss_pred CCcchHHHHHHHHHHHHHHHcCCCCCCc---ceeEEeCCChH-HHHHHHHhhc--------CCC-----C-eEEEecCCC
Q 022564 85 GGNEYIDMAESLCQKRALEAFRLDPEKW---GVNVQSLSGSP-SNFQVYTALL--------KPH-----D-RIMALDLPH 146 (295)
Q Consensus 85 ~~~~~~~~l~~~~~~~la~~~g~~~~~~---~~~v~~~sG~~-a~~~~~~al~--------~~g-----d-~Vl~~~~~~ 146 (295)
...+...++|.++.+|+++++|.+.... ...-++|+|++ +++.++.+.- ..| . .|++++..|
T Consensus 72 ~~~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH 151 (373)
T PF00282_consen 72 EASPAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAH 151 (373)
T ss_dssp TTSHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-
T ss_pred ccccccccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccc
Confidence 3446778899999999999999972110 01466778887 7775554431 112 2 455666556
Q ss_pred CcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhc--C---CcEEEEc--CCCCCCccCHHHHHHHH
Q 022564 147 GGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF--R---PKLIVAG--ASAYARLYDYERIRKVC 219 (295)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~--~---tk~i~l~--~~n~~~~~~l~~I~~ia 219 (295)
.+... .+.+.|..++.++ ++ +++.+|+++|++++.+. + +-+|+.+ .++.|...|+++|+++|
T Consensus 152 ~S~~K--------aa~~lGlg~~~I~--~~-~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~ 220 (373)
T PF00282_consen 152 YSIEK--------AARILGLGVRKIP--TD-EDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADIC 220 (373)
T ss_dssp THHHH--------HHHHTTSEEEEE---BB-TTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHH
T ss_pred cHHHH--------hcceeeeEEEEec--CC-cchhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhc
Confidence 55533 5557777665555 66 57899999999998642 2 2133333 55557999999999999
Q ss_pred HHcCCEEEEEccccccccccC-CC--CCCCCcceEEEeCCCCCCCCCce-EEEEEeCCc
Q 022564 220 NKQKAIMLADMAHISGLVAAG-VI--PSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGV 274 (295)
Q Consensus 220 ~~~~~~vivD~a~~~g~~~~~-~~--~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~~ 274 (295)
+++++|+++|+|++...+... .. ...+..+|.++.++|||++.|.+ |++++|++.
T Consensus 221 ~~~~~wlHVDaA~gg~~~~~~~~~~~~~gi~~adSit~d~HK~l~~P~~~~~~l~r~~~ 279 (373)
T PF00282_consen 221 EKYNIWLHVDAAYGGSALLSPEYRHLLFGIERADSITIDPHKWLGVPYGCGVLLVRDKS 279 (373)
T ss_dssp HHCT-EEEEEETTGGGGGGHCTTGGGGTTGGGESEEEEETTTTTS-SSS-EEEEESSGG
T ss_pred cccceeeeecccccccccccccccccccccccccccccchhhhhcCCccceeEEeeccc
Confidence 999999999999765443322 21 23344699999999999999999 999999874
No 219
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.69 E-value=2.8e-16 Score=142.43 Aligned_cols=203 Identities=11% Similarity=0.093 Sum_probs=136.7
Q ss_pred ceecCCCCCCCHHHHHHHhhhhhccCC--CCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH--H
Q 022564 49 LELIPSENFTSVSVMQAVGSVMTNKYS--EGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP--S 124 (295)
Q Consensus 49 i~L~~~~~~~~~~v~~al~~~l~~~~~--~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~--a 124 (295)
+.+++|...+|+.|+++|...+.+... .|...-. .......++.+.+++.++++++.+.+. .+++++|+. +
T Consensus 5 ~l~~pGP~~~p~~V~~a~~~~~~~~~~~~~g~~~~~--hr~~~f~~~~~~~~~~l~~l~~~~~~~---~v~~~~gsgt~~ 79 (360)
T PRK05355 5 YNFSAGPAMLPEEVLEQAQQELLDWNGSGMSVMEIS--HRSKEFEAVAEEAEADLRELLNIPDNY---KVLFLQGGASLQ 79 (360)
T ss_pred eeccCCCCCCCHHHHHHHHHHhhccccCCccccccC--CCCHHHHHHHHHHHHHHHHHhCCCCCc---EEEEEcCCchHH
Confidence 567888888999999999988754111 1111110 111233477778999999999983322 566655554 8
Q ss_pred HHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHH-HHhhcCCcEEEEc-
Q 022564 125 NFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEK-SATLFRPKLIVAG- 202 (295)
Q Consensus 125 ~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~-~i~~~~tk~i~l~- 202 (295)
+.+++..++.+||++++...-..++.. .+.++..|.. ..+. .+...+..+..++++ .+++ ++++|.++
T Consensus 80 ~Ea~~~nl~~~g~~~l~i~~G~fg~r~------~~~a~~~g~~-~~~~--~~~~~g~~~~~~~~~~~l~~-~~~~V~~th 149 (360)
T PRK05355 80 FAMVPMNLLGGGKKADYVDTGSWSKKA------IKEAKKYGEV-NVAA--SSEDDGFTYIPPLDEWQLSD-DAAYVHYTS 149 (360)
T ss_pred HHHHHHhcCCCCCeEEEEECCHHHHHH------HHHHHHhCCc-eEEe--cccccCCCCCCChhhccCCC-CCCEEEEcc
Confidence 888999999999999887732222211 1123344532 3333 221134445545555 6766 78999885
Q ss_pred -CCCCCCcc-CHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCce-EEEEEeCCchhhh
Q 022564 203 -ASAYARLY-DYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEIN 278 (295)
Q Consensus 203 -~~n~~~~~-~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~~ 278 (295)
.++.|... |+++| +|+++++|++|++|..+.++.. .|++++|+||+| ||+| |++++++++.+..
T Consensus 150 ~eTstGv~~~~i~~i------~g~l~vVDavss~g~~~idv~~-----~d~~~~ssqK~l-gP~Glg~l~~s~~~l~~~ 216 (360)
T PRK05355 150 NETIDGTEFHELPDT------GDVPLVADMSSDILSRPIDVSK-----FGLIYAGAQKNI-GPAGLTIVIVREDLLGRA 216 (360)
T ss_pred CCCcceEecCccccc------CCCcEEEEcCccccCccCCHHH-----ccEEEEeccccc-cCCceEEEEECHHHHhhc
Confidence 44446665 66665 8999999999999999987764 469999999988 5999 9999999987654
No 220
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.69 E-value=1.8e-15 Score=139.49 Aligned_cols=204 Identities=13% Similarity=0.110 Sum_probs=130.0
Q ss_pred cCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-
Q 022564 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP- 123 (295)
Q Consensus 47 ~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~- 123 (295)
+.++|..+++. +++.+.+++.+.+.+... . .....|+...+...+++++.+++.+ .+++++ +|++|+|++
T Consensus 34 ~~i~l~~~~~~~~~~~~v~~~~~~~~~~~~~-~-~~~~~Y~p~~g~~~lr~aia~~~~~-~~~~~d----~I~it~Ga~~ 106 (402)
T TIGR03542 34 DIIRLGIGDTTQPLPASVIEAFHNAVDELAS-E-ETFRGYGPEQGYPFLREAIAENDYR-GRIDPE----EIFISDGAKC 106 (402)
T ss_pred CeEEcCCCCCCCCCCHHHHHHHHHHHhcccc-c-ccccCCCCCCCCHHHHHHHHHHHHh-cCCCHH----HEEECCCcHH
Confidence 46889888875 578889999887765211 0 0111244445667777666665432 157776 899999999
Q ss_pred HHHHHHHhhcCCCCeEEEecCCCCcccCcccccccccccccee-----------eeEEEeeecCC-CCCCCCHHHHHHHH
Q 022564 124 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSI-----------FFETMPYRLNE-STGYIDYDQLEKSA 191 (295)
Q Consensus 124 a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~-----------~~~~v~~~~~~-~~~~id~e~l~~~i 191 (295)
++. ++..++.+||+|++++|.|..+.. .+...|. .+ ++++.+. +++.+|+++
T Consensus 107 al~-~l~~l~~~gd~Vlv~~P~y~~~~~--------~~~~~g~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~----- 170 (402)
T TIGR03542 107 DVF-RLQSLFGSDNTVAVQDPVYPAYVD--------SNVMAGRAGVLDDDGRYSKI--TYLPCTKENNFIPDLPE----- 170 (402)
T ss_pred HHH-HHHHhcCCCCEEEEeCCCCcchHH--------HHHHcCCccccccccccceE--EEeecchhhCCCCCccc-----
Confidence 666 456677899999999976665543 2233443 33 3334442 234555432
Q ss_pred hhcCCcEEEEcCCCCC--Ccc---CHHHHHHHHHHcCCEEEEEccccccccccCCCCCC---CCc---ceEEEeCCCCCC
Q 022564 192 TLFRPKLIVAGASAYA--RLY---DYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP---FEY---ADVVTTTTHKSL 260 (295)
Q Consensus 192 ~~~~tk~i~l~~~n~~--~~~---~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~---~~~---~D~~~~s~~K~l 260 (295)
.. ++++|+++++||| ... .+++|.++|++|+++||+|+++..-... +..+.+ +.. .-+++.|++|.|
T Consensus 171 ~~-~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~-~~~~~~~~~~~~~~~~vi~~~SfSK~~ 248 (402)
T TIGR03542 171 EP-KIDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISD-PSLPHSIFEIPGAKECAIEFRSFSKTA 248 (402)
T ss_pred cC-CceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccC-CCCCcchhhCCCCcccEEEEecCcccc
Confidence 13 7899999866664 444 4788999999999999999997632221 111111 111 236689999987
Q ss_pred C--CCceEEEEEeCCch
Q 022564 261 R--GPRGAMIFFRKGVK 275 (295)
Q Consensus 261 ~--gp~gG~l~~~~~~~ 275 (295)
+ |.+-|++++++++.
T Consensus 249 g~pGlRiG~~i~~~~l~ 265 (402)
T TIGR03542 249 GFTGVRLGWTVVPKELT 265 (402)
T ss_pred CCCCcceEEEEecHHHh
Confidence 4 44449999987654
No 221
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.69 E-value=1.9e-15 Score=135.94 Aligned_cols=208 Identities=15% Similarity=0.110 Sum_probs=133.5
Q ss_pred eecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHH
Q 022564 50 ELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNF 126 (295)
Q Consensus 50 ~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~ 126 (295)
+|+.+.++ +++.+..++.+.-.. .....|.......++++.+++++...++..... .++++++|++ ++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~--~~~~~~~~~t~a~~ 73 (350)
T cd00609 2 DLSIGEPDFPPPPEVLEALAAAALR------AGLLGYYPDPGLPELREAIAEWLGRRGGVDVPP--EEIVVTNGAQEALS 73 (350)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHhhc------cCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCc--ceEEEecCcHHHHH
Confidence 45545443 466666666541111 111224444667788887888887776632111 1788888888 777
Q ss_pred HHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCH--HHHHHHHhhcCCcEEEEcCC
Q 022564 127 QVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDY--DQLEKSATLFRPKLIVAGAS 204 (295)
Q Consensus 127 ~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~--e~l~~~i~~~~tk~i~l~~~ 204 (295)
.++.++.++||+|+++.+.|.++... ++..|..+..++ .+ +++..+. +.+++...+ ++++|+++.+
T Consensus 74 ~~~~~~~~~g~~vl~~~~~~~~~~~~--------~~~~~~~~~~i~--~~-~~~~~~~~~~~~~~~~~~-~~~~v~i~~~ 141 (350)
T cd00609 74 LLLRALLNPGDEVLVPDPTYPGYEAA--------ARLAGAEVVPVP--LD-EEGGFLLDLELLEAAKTP-KTKLLYLNNP 141 (350)
T ss_pred HHHHHhCCCCCEEEEcCCCchhHHHH--------HHHCCCEEEEEe--cc-cccCCccCHHHHHhhcCc-cceEEEEECC
Confidence 78888899999999999877776442 234454454454 44 3344443 666666555 8999998744
Q ss_pred CC--CCccCHH---HHHHHHHHcCCEEEEEccccccccccCCC----CCCCCcceEEEeCCCCCCC--CCceEEEEEeC-
Q 022564 205 AY--ARLYDYE---RIRKVCNKQKAIMLADMAHISGLVAAGVI----PSPFEYADVVTTTTHKSLR--GPRGAMIFFRK- 272 (295)
Q Consensus 205 n~--~~~~~l~---~I~~ia~~~~~~vivD~a~~~g~~~~~~~----~~~~~~~D~~~~s~~K~l~--gp~gG~l~~~~- 272 (295)
++ |...|++ +|.++|+++|+++|+|++|+.+....... .....+.|+++.|+||+++ |++.|++++++
T Consensus 142 ~~~tG~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~ 221 (350)
T cd00609 142 NNPTGAVLSEEELEELAELAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPE 221 (350)
T ss_pred CCCCCcccCHHHHHHHHHHHHhCCeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCcccceEEEecCHH
Confidence 44 4566655 55589999999999999987655432211 1111248899999999996 33449999988
Q ss_pred Cchhh
Q 022564 273 GVKEI 277 (295)
Q Consensus 273 ~~~~~ 277 (295)
++.+.
T Consensus 222 ~~~~~ 226 (350)
T cd00609 222 ELLER 226 (350)
T ss_pred HHHHH
Confidence 55443
No 222
>PRK15029 arginine decarboxylase; Provisional
Probab=99.69 E-value=3.4e-16 Score=151.50 Aligned_cols=166 Identities=19% Similarity=0.121 Sum_probs=128.5
Q ss_pred HHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEe
Q 022564 94 ESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMP 172 (295)
Q Consensus 94 ~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~ 172 (295)
..++++..+++||++. ..+.++|+| +|.+++++++++||+|++...+|-|++. ++.+.|+...++.
T Consensus 207 I~eAq~~aA~~fgA~~-----t~FlvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~~--------al~L~ga~Pvyl~ 273 (755)
T PRK15029 207 FGESEKYAARVFGADR-----SWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQ--------GLILTGAKPVYMV 273 (755)
T ss_pred HHHHHHHHHHHhCCCc-----EEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHH--------HHHHcCCeEEEec
Confidence 3346689999999987 789999999 8998999999999999999999988876 4447776655553
Q ss_pred eecCCCC---CCCC-----HHHHHHHHhhc-CCc--------EEEEcCCCC-CCccCHHHHHHHHHHcCCEEEEEccccc
Q 022564 173 YRLNEST---GYID-----YDQLEKSATLF-RPK--------LIVAGASAY-ARLYDYERIRKVCNKQKAIMLADMAHIS 234 (295)
Q Consensus 173 ~~~~~~~---~~id-----~e~l~~~i~~~-~tk--------~i~l~~~n~-~~~~~l~~I~~ia~~~~~~vivD~a~~~ 234 (295)
-..+ +. +.++ ++.++++++.. .+| ++++++|+| |.+.++++|+++|+++++++++|+||++
T Consensus 274 P~~~-~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY~Gv~~di~~I~~~~h~~~~~llvDEAhGa 352 (755)
T PRK15029 274 PSRN-RYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTYDGVCYNAKEAQDLLEKTSDRLHFDEAWYG 352 (755)
T ss_pred cccc-ccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCCcceeeCHHHHHHHHHhcCCeEEEECcccc
Confidence 2221 21 2344 89999998642 234 888888888 8999999999999999999999999987
Q ss_pred cccccCCCC--CCC-------Ccce-EEEeCCCCCCCCCce-EEEEEeCC
Q 022564 235 GLVAAGVIP--SPF-------EYAD-VVTTTTHKSLRGPRG-AMIFFRKG 273 (295)
Q Consensus 235 g~~~~~~~~--~~~-------~~~D-~~~~s~~K~l~gp~g-G~l~~~~~ 273 (295)
........+ ..+ .|+| +++-|.||++++... ++|.++.+
T Consensus 353 h~~F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~alTQaS~LHv~~~ 402 (755)
T PRK15029 353 YARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREG 402 (755)
T ss_pred ccccCccccccccccccccccCCCceEEEEchhhcccchhhhhhheeCCC
Confidence 654433322 222 4688 999999999999877 88888654
No 223
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.68 E-value=7.2e-16 Score=140.01 Aligned_cols=213 Identities=15% Similarity=0.145 Sum_probs=136.1
Q ss_pred cCceecCCCCCC------CHHHHHHHhh-hhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCC--CCCCcceeEE
Q 022564 47 KGLELIPSENFT------SVSVMQAVGS-VMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWGVNVQ 117 (295)
Q Consensus 47 ~~i~L~~~~~~~------~~~v~~al~~-~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~--~~~~~~~~v~ 117 (295)
+.|+|..+++.. ++++.+++.+ ....... ..|+...+...+++++.+++.+..|. +++ .+|+
T Consensus 2 ~~I~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~---~~i~ 72 (363)
T PF00155_consen 2 DVINLGSNAPLLLSQNPPPPAAIKAAIRGAATSSSF------LGYPPPQGYPELREAIADFLGRRYGVPVDPE---ANIL 72 (363)
T ss_dssp TEEESSSSSTSSTTSSHHHHHHHHHHHHHHHHHTGC------TSSTCTTHHHHHHHHHHHHHHHHHTHHTTGG---EGEE
T ss_pred CEEEEECCCCCCcccccchHHHHHHHHHHhhccccc------ccCCCchhhHHHHHHHHHHhhhccCcccccc---eEEE
Confidence 357787776643 3555666554 2211111 12455566788887777776655554 442 2699
Q ss_pred eCCChH-HHHHHHHhh-cCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhc-
Q 022564 118 SLSGSP-SNFQVYTAL-LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF- 194 (295)
Q Consensus 118 ~~sG~~-a~~~~~~al-~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~- 194 (295)
+++|+. ++..++..+ .++||.|++++|.|+.+.. .++..|..+..+++... +++.+|++++++.+++.
T Consensus 73 ~~~G~~~~~~~~~~~~~~~~~~~vlv~~P~y~~~~~--------~~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~l~~~~ 143 (363)
T PF00155_consen 73 VTSGAQAALFLLLRLLKINPGDTVLVPDPCYPSYIE--------AARLLGAEVIPVPLDSE-NDFHLDPEALEEALDELP 143 (363)
T ss_dssp EESHHHHHHHHHHHHHHSSTTSEEEEEESSSTHHHH--------HHHHTTSEEEEEEEEET-TTTEETHHHHHHHHHTSH
T ss_pred EecccccchhhhhhcccccccccceecCCccccccc--------cccccCceeeecccccc-cccccccccccccccccc
Confidence 999999 555566666 6799999999955555533 44566766555554333 56799999999999753
Q ss_pred ----CCcEEEEcCCCCC--CccC---HHHHHHHHHHcCCEEEEEccccccccccCCC---CCCCC-cc-eEEEeCCCCCC
Q 022564 195 ----RPKLIVAGASAYA--RLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVI---PSPFE-YA-DVVTTTTHKSL 260 (295)
Q Consensus 195 ----~tk~i~l~~~n~~--~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~---~~~~~-~~-D~~~~s~~K~l 260 (295)
++++++++.++|| ...+ +++|+++|++||+++|+|++|.......... ...+. +. .+++.|++|.|
T Consensus 144 ~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~ 223 (363)
T PF00155_consen 144 SKGPRPKAVLICNPNNPTGSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSF 223 (363)
T ss_dssp TTTETEEEEEEESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHHTTTSTEEEEEESTTTT
T ss_pred ccccccceeeecccccccccccccccccchhhhhcccccceeeeeceeccccCCCccCcccccccccccceeeeeccccc
Confidence 4578888766664 4444 5566666999999999999987655442100 00001 12 48899999987
Q ss_pred CCC--ceEEEEEeCCchhh
Q 022564 261 RGP--RGAMIFFRKGVKEI 277 (295)
Q Consensus 261 ~gp--~gG~l~~~~~~~~~ 277 (295)
+.| +-|++++++++.+.
T Consensus 224 g~~GlRvG~i~~~~~~~~~ 242 (363)
T PF00155_consen 224 GLPGLRVGYIVAPPELIER 242 (363)
T ss_dssp TSGGGTEEEEEEEHHHHHH
T ss_pred cccccccccccchhhhhhh
Confidence 433 33999998766543
No 224
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.67 E-value=1.1e-15 Score=137.71 Aligned_cols=200 Identities=16% Similarity=0.055 Sum_probs=133.7
Q ss_pred cCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-
Q 022564 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP- 123 (295)
Q Consensus 47 ~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~- 123 (295)
+.++|..++++ +++.+.+++.+.+.......|+. .+...++ +.+++++|++++ +|++|+|++
T Consensus 19 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-------~g~~~lr----~~ia~~~~~~~~----~I~~t~G~~~ 83 (337)
T PRK03967 19 YRIWLDKNENPFDLPEELKEEIFEELKRVPFNRYPH-------ITSDPLR----EAIAEFYGLDAE----NIAVGNGSDE 83 (337)
T ss_pred ceEEecCCCCCCCCCHHHHHHHHHHhhcCccccCCC-------CCHHHHH----HHHHHHhCcCcc----eEEEcCCHHH
Confidence 45888888864 57889999888764311112321 2334444 777788888886 899999999
Q ss_pred HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcC
Q 022564 124 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGA 203 (295)
Q Consensus 124 a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~ 203 (295)
++..++.++ +||+|+++.|.|+.+ ...+...|..+..+ +.+ +++.+|++++++.+ + ++++++++.
T Consensus 84 ~l~~~~~~~--~gd~V~v~~P~y~~~--------~~~~~~~g~~~~~v--~~~-~~~~~d~~~l~~~~-~-~~~~v~~~~ 148 (337)
T PRK03967 84 LISYLVKLF--EGKHIVITPPTFGMY--------SFYAKLNGIPVIDV--PLK-EDFTIDGERIAEKA-K-NASAVFICS 148 (337)
T ss_pred HHHHHHHHh--CCCeEEEeCCChHHH--------HHHHHHcCCeEEEe--ecC-CCCCcCHHHHHHhc-c-CCCEEEEeC
Confidence 666455554 799999999655433 22334556555444 455 45789999998875 3 789988876
Q ss_pred CCCC--CccCHHHHHHHHHHcCCEEEEEccccccccccCCCCC-CCCcceEEEeCCCCCCC--CCceEEEEEeCCchhhh
Q 022564 204 SAYA--RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPS-PFEYADVVTTTTHKSLR--GPRGAMIFFRKGVKEIN 278 (295)
Q Consensus 204 ~n~~--~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~-~~~~~D~~~~s~~K~l~--gp~gG~l~~~~~~~~~~ 278 (295)
+||| ...+.++|.++++ +++++|+|+++..- ........ .....-+++.|++|.|+ |.+.|++++++++.+..
T Consensus 149 P~NPtG~~~~~~~l~~i~~-~~~~ii~De~y~~~-~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~iv~~~~~i~~~ 226 (337)
T PRK03967 149 PNNPTGNLQPEEEILKVLE-TGKPVVLDEAYAEF-SGKSLIGLIDEYPNLILLRTFSKAFGLAGIRAGYAIANEEIIDAL 226 (337)
T ss_pred CCCCCCCCCCHHHHHHHHh-cCCEEEEECchhhh-cccchHHHHhhCCCEEEEecchHhhcchhhhheeeecCHHHHHHH
Confidence 6664 7888999999995 79999999997531 11000000 00012377899999885 44559999987765543
No 225
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.67 E-value=1.2e-16 Score=140.08 Aligned_cols=195 Identities=19% Similarity=0.221 Sum_probs=131.7
Q ss_pred CCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhc
Q 022564 54 SENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALL 133 (295)
Q Consensus 54 ~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~ 133 (295)
+++ +.|+++++|.+.... .. .|+..+...+++ +.+++++|.+. .+++.+|+.++..++.+++
T Consensus 4 SD~-~~~~m~~a~~~a~~g-----d~---~Yg~D~~~~~l~----~~i~~l~g~e~-----a~f~~sGT~An~~al~~~~ 65 (290)
T PF01212_consen 4 SDT-PTPAMLEAMAAANVG-----DD---AYGEDPTTARLE----ERIAELFGKEA-----ALFVPSGTMANQLALRAHL 65 (290)
T ss_dssp -SS-S-HHEEHHHHHTTSB------C---CTTSSHHHHHHH----HHHHHHHTSSE-----EEEESSHHHHHHHHHHHHH
T ss_pred ccC-CCHHHHHHHHccccC-----Cc---ccCCChhHHHHH----HHHHHHcCCCE-----EEEeCCCChHHHHHHHHHH
Confidence 444 788888998654432 11 256666666666 88888999875 5666777779998999999
Q ss_pred CCCCeEEEecCCCCcccCcccccccccc-ccceeeeEEEeeecCCCCCCCCHHHHHHHHhh-----cCCcEEEEc-CCCC
Q 022564 134 KPHDRIMALDLPHGGHLSHGYQTDTKKI-SAVSIFFETMPYRLNESTGYIDYDQLEKSATL-----FRPKLIVAG-ASAY 206 (295)
Q Consensus 134 ~~gd~Vl~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~-----~~tk~i~l~-~~n~ 206 (295)
+|++.|++.+..|-.+... .++ .+.|.++ ++++.+ +++.+|+++|++.+.. .++++|++. +++.
T Consensus 66 ~~~~~vi~~~~aHi~~~E~------ga~~~~~G~~~--~~l~~~-~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~ 136 (290)
T PF01212_consen 66 RPGESVICADTAHIHFDET------GAIEELSGAKL--IPLPSD-DDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTEL 136 (290)
T ss_dssp HTTEEEEEETTEHHHHSST------THHHHHTTCEE--EEEBEC-TGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTT
T ss_pred hcCCceeccccceeeeecc------chhhHhcCcEE--EECCCc-ccCCCCHHHHHHHhhhccccCCCccEEEEEecCcC
Confidence 9999999888533322221 122 3566544 444443 3389999999999976 467899997 4444
Q ss_pred --C---CccCHHHHHHHHHHcCCEEEEEccccccccc-cCCCCCC-CCcceEEEeCCCCCCCCCceEEEEEeCCch
Q 022564 207 --A---RLYDYERIRKVCNKQKAIMLADMAHISGLVA-AGVIPSP-FEYADVVTTTTHKSLRGPRGAMIFFRKGVK 275 (295)
Q Consensus 207 --~---~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~-~~~~~~~-~~~~D~~~~s~~K~l~gp~gG~l~~~~~~~ 275 (295)
| +..++++|.++|++||+.++.|+|....... .+..... ..++|.+.+|++|.++.|.|+++++++++.
T Consensus 137 ~GG~~~s~~el~ai~~~a~~~gl~lhmDGARl~~a~~~~~~~~~e~~~~~D~v~~~~tK~~g~~~Gavl~~~~~~i 212 (290)
T PF01212_consen 137 AGGTVYSLEELRAISELAREHGLPLHMDGARLANAAAALGVSLAEIAAGADSVSFGGTKNGGAPGGAVLAGNKEFI 212 (290)
T ss_dssp TTSB---HHHHHHHHHHHHHHT-EEEEEETTHHHHHCHHHHHHHHHHTTSSEEEEETTSTT-SSSEEEEEESHHHH
T ss_pred CCCeeCCHHHHHHHHHHHHhCceEEEEehhhHHHhhhcccccHHHHhhhCCEEEEEEEcccccccceEEEechHHH
Confidence 5 4456778889999999999999995433221 1110000 135999999999999999999999999854
No 226
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.67 E-value=5.8e-16 Score=151.27 Aligned_cols=167 Identities=16% Similarity=0.125 Sum_probs=122.0
Q ss_pred chHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhc--------CCCCeEEEecCCCCcccCcccccccc
Q 022564 88 EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALL--------KPHDRIMALDLPHGGHLSHGYQTDTK 159 (295)
Q Consensus 88 ~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~--------~~gd~Vl~~~~~~~~~~~~~~~~~~~ 159 (295)
++..++..++++++++++|.+. +.+...+|+.+.+++++++- ...++|+++...|+++..+
T Consensus 539 QG~lq~i~elq~~l~eLtGmd~----~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNpas------- 607 (954)
T PRK12566 539 EGYRAMIDELEAWLCAITGFDA----ICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNPAS------- 607 (954)
T ss_pred cCHHHHHHHHHHHHHHHHCCCe----EeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCHHH-------
Confidence 3444555567799999999987 37777888887765666542 2346789999999888433
Q ss_pred ccccceeeeEEEeeecCCCCCCCCHHHHHHHHhh--cCCcEEEEcCCCC-C-CccCHHHHHHHHHHcCCEEEEEcccccc
Q 022564 160 KISAVSIFFETMPYRLNESTGYIDYDQLEKSATL--FRPKLIVAGASAY-A-RLYDYERIRKVCNKQKAIMLADMAHISG 235 (295)
Q Consensus 160 ~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~--~~tk~i~l~~~n~-~-~~~~l~~I~~ia~~~~~~vivD~a~~~g 235 (295)
+...|.+++.+ +.+ +++.+|+++|++++++ .++++|+++.+++ | ...++++|+++||++|+++++|++|..+
T Consensus 608 -a~~~GieVv~V--p~D-~~G~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a 683 (954)
T PRK12566 608 -AQMAGMRVVIV--ECD-PDGNVDLDDLKAKAAAAGDRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNA 683 (954)
T ss_pred -HHHCCCEEEEe--ccC-CCCCcCHHHHHHHhhccCCCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhh
Confidence 22456555445 455 5789999999999973 2566677765554 4 4567999999999999999999999876
Q ss_pred ccccCC-CCCCCCcceEEEeCCCCCCCCCce-EEEEEeC
Q 022564 236 LVAAGV-IPSPFEYADVVTTTTHKSLRGPRG-AMIFFRK 272 (295)
Q Consensus 236 ~~~~~~-~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~ 272 (295)
...... ... |+|++++++||||++|.| |..+...
T Consensus 684 ~~~l~~Pg~~---GADi~~~s~HKtf~~P~G~GGP~vG~ 719 (954)
T PRK12566 684 QVGLARPADI---GADVSHMNLHKTFCIPHGGGGPGMGP 719 (954)
T ss_pred ccCCCChhhc---CCCEEEecCCcccCcCccCCCCccch
Confidence 665442 223 599999999999998887 6665554
No 227
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.67 E-value=3.3e-16 Score=142.58 Aligned_cols=186 Identities=13% Similarity=0.124 Sum_probs=120.7
Q ss_pred cCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCcccccccccccc
Q 022564 84 YGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISA 163 (295)
Q Consensus 84 ~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~ 163 (295)
|++++...+++ +.+++++|.+. .|.+.+|+.|...++...++|||+| +.+.|-... . ..+..
T Consensus 67 yag~~s~~~lE----~~va~~~G~~~-----av~v~sGT~Al~ll~~l~l~pGDeV--psn~~f~Tt---~----ahIe~ 128 (450)
T TIGR02618 67 YAGSRNFYHLE----RTVRELYGFKY-----VVPTHQGRGAENLLSQIAIKPGDYV--PGNMYFTTT---R----YHQEK 128 (450)
T ss_pred hcCCCcHHHHH----HHHHHHHCCCe-----EEEcCCHHHHHHHHHHhCCCCcCEE--CCceeHHHH---H----HHHHh
Confidence 66667777777 77888999886 5666677777554555568999987 443221111 1 01234
Q ss_pred ceeeeEEEeeecC---------CCCCCCCHHHHHHHHhhc---CCcEEEEc-CCCC--CCc---cCHHHHHHHHHHcCCE
Q 022564 164 VSIFFETMPYRLN---------ESTGYIDYDQLEKSATLF---RPKLIVAG-ASAY--ARL---YDYERIRKVCNKQKAI 225 (295)
Q Consensus 164 ~g~~~~~v~~~~~---------~~~~~id~e~l~~~i~~~---~tk~i~l~-~~n~--~~~---~~l~~I~~ia~~~~~~ 225 (295)
.|..+ +.+..+ +.++.+|++++++++++. ++++|.+. ..|. |.. .++++|.++|++||+.
T Consensus 129 ~Gav~--vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~ 206 (450)
T TIGR02618 129 NGATF--VDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGIK 206 (450)
T ss_pred CCeEE--EeeecccccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCE
Confidence 45422 322122 346889999999999752 33455554 3332 344 5689999999999999
Q ss_pred EEEEcccccccccc------CCCCCC--------CCcceEEEeCCCCCCCCCceEEEEEeCCchhhhccCCeeEEEeE
Q 022564 226 MLADMAHISGLVAA------GVIPSP--------FEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEFTCRCF 289 (295)
Q Consensus 226 vivD~a~~~g~~~~------~~~~~~--------~~~~D~~~~s~~K~l~gp~gG~l~~~~~~~~~~~~~~~~~~~~~ 289 (295)
||.|+||.+|.-.. +....+ +.++|.+++|++|.+++|.||+|+++++-.....+.+.+.|.+|
T Consensus 207 vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~~~~GG~l~~~d~~l~~k~r~~~~~~eG~ 284 (450)
T TIGR02618 207 VFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSYADGCTMSGKKDCLVNIGGFLCMNDDEMFQSAKELVVVFEGM 284 (450)
T ss_pred EEEEccchhhChhhhhcccccccCCCHHHHHHHHhccCcEEEEeeccCCCCCCceEEEeCCHHHHHHHHHHhhhcCCc
Confidence 99999999864221 222222 23699999999999999999999988763222223444455544
No 228
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.67 E-value=1.8e-15 Score=137.94 Aligned_cols=193 Identities=19% Similarity=0.148 Sum_probs=124.9
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCC-cccCCcc---hHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhc
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGA-RYYGGNE---YIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALL 133 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~-~~~~~~~---~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~ 133 (295)
.+|++.+++.+.+.. |....|++ .+..++. +...+.+++++.+++++|++. .+++++|+.++..++..+.
T Consensus 19 ~~~~~~~~~~~~~~~-~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~~~-----~l~~~sG~~a~~~~~~~~~ 92 (370)
T PRK05937 19 RSDTLVHEVEKRYRL-YCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAPE-----AFIVPSGYMANLGLCAHLS 92 (370)
T ss_pred CCHHHHHHHHHHHHH-hccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCCCe-----EEEECChHHHHHHHHHHhC
Confidence 356666666666554 21111211 1112222 123455567799999999964 6999999998886666666
Q ss_pred CCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhc-----CCcEEEEcCCCC--
Q 022564 134 KPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF-----RPKLIVAGASAY-- 206 (295)
Q Consensus 134 ~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~-----~tk~i~l~~~n~-- 206 (295)
++||.|++...+|++........ .+. .+.++ ..|+++++++++.. ++++|+++..++
T Consensus 93 ~~~d~ii~d~~~H~sv~~~~~~~-------~~~---~~~~~------~~d~~~l~~~l~~~~~~~~~~~~v~v~~v~s~~ 156 (370)
T PRK05937 93 SVTDYVLWDEQVHISVVYSLSVI-------SGW---HQSFR------HNDLDHLESLLESCRQRSFGRIFIFVCSVYSFK 156 (370)
T ss_pred CCCCEEEEEhhhhHHHHHHHHHc-------CCc---eEEec------CCCHHHHHHHHHhhhccCCCcEEEEEecCCCCC
Confidence 78899888888898876644311 111 12221 35899999988631 345666663333
Q ss_pred CCccCHHHHHHHHHHcCCEEEEEccccccccccCCC----CCCCCcceEEEeCCCCCCCCCceEEEEEeCC
Q 022564 207 ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI----PSPFEYADVVTTTTHKSLRGPRGAMIFFRKG 273 (295)
Q Consensus 207 ~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~----~~~~~~~D~~~~s~~K~l~gp~gG~l~~~~~ 273 (295)
|...|+++|.++|+++|+++++|++|+.|.++.+.. .+.....++++.|++|.+ ||.|+.+++.++
T Consensus 157 G~i~pl~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~-g~~G~~vl~~~~ 226 (370)
T PRK05937 157 GTLAPLEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKAL-GSMGAALLSSSE 226 (370)
T ss_pred CCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEechhhh-hcCceEEEcCHH
Confidence 689999999999999999999999999987765432 122222346678889976 677744445444
No 229
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.67 E-value=2.1e-16 Score=143.13 Aligned_cols=164 Identities=18% Similarity=0.144 Sum_probs=115.0
Q ss_pred HHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhhcCCC-CeEEEecCCCCcccCccccccccccccceeeeEEEeee
Q 022564 97 CQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPH-DRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYR 174 (295)
Q Consensus 97 ~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al~~~g-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 174 (295)
+++++++++|++++ +|++|+|++ ++..++.+++++| |+|+++.| .|..|...++..|.++..++
T Consensus 62 l~~~~a~~~g~~~~----~I~~~~Gs~e~i~~~~~~~~~~g~~~vli~~P--------~y~~y~~~~~~~G~~~~~v~-- 127 (351)
T PRK01688 62 VIENYAAYAGVKPE----QVLVSRGADEGIELLIRAFCEPGKDAILYCPP--------TYGMYSVSAETIGVEIRTVP-- 127 (351)
T ss_pred HHHHHHHHhCCCHH----HEEEcCCHHHHHHHHHHHhcCCCCCEEEEcCC--------CHHHHHHHHHHcCCEEEEee--
Confidence 56889999999987 899999999 8777888899997 89999994 44444444556776665554
Q ss_pred cCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccCHHHHHHHHHHc--CCEEEEEccccccccccCCCCC-CCCcc
Q 022564 175 LNESTGYIDYDQLEKSATLFRPKLIVAGASAYA--RLYDYERIRKVCNKQ--KAIMLADMAHISGLVAAGVIPS-PFEYA 249 (295)
Q Consensus 175 ~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~~--~~~~l~~I~~ia~~~--~~~vivD~a~~~g~~~~~~~~~-~~~~~ 249 (295)
.+ +++.+|++++++++ + ++++|++|+|||| ...+.++|.++++.. +++||+|+++.--......... ....-
T Consensus 128 ~~-~~~~~d~~~l~~~~-~-~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vivDEay~~f~~~~s~~~~~~~~~n 204 (351)
T PRK01688 128 TL-DNWQLDLPAIADNL-D-GVKVVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPH 204 (351)
T ss_pred cC-CCCCCCHHHHHHhc-c-CCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhcCCCCChHHHHhhCCC
Confidence 44 45899999999988 4 8999999877774 677777666666532 6899999996432210000000 00013
Q ss_pred eEEEeCCCCCCC--CCceEEEEEeCCchhh
Q 022564 250 DVVTTTTHKSLR--GPRGAMIFFRKGVKEI 277 (295)
Q Consensus 250 D~~~~s~~K~l~--gp~gG~l~~~~~~~~~ 277 (295)
-+++.|++|+++ |.+-|++++++++.+.
T Consensus 205 ~iv~rSfSK~~glaGlRiGy~i~~~~~i~~ 234 (351)
T PRK01688 205 LVILRTLSKAFALAGLRCGFTLANEEVINL 234 (351)
T ss_pred EEEEecchHhhcCHHHHHhHHhCCHHHHHH
Confidence 378999999874 2333999998876543
No 230
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.66 E-value=1.4e-15 Score=140.65 Aligned_cols=193 Identities=21% Similarity=0.224 Sum_probs=128.6
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCc-ccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhc--C
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGAR-YYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALL--K 134 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~-~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~--~ 134 (295)
.+|.+++++.+.+.. +..+..+++ +++...... .+++.+++++|.+ + .+++++|++++..++..+. .
T Consensus 61 ~~p~v~~a~~~~~~~-~~~~~~~s~~~~~~~~~~~----~Le~~la~~~g~~-~----~i~~~sG~~a~~~~i~~l~~~~ 130 (410)
T PRK13392 61 QHPDVIGAMVDALDR-YGAGAGGTRNISGTSHPHV----LLERELADLHGKE-S----ALLFTSGYVSNDAALSTLGKLL 130 (410)
T ss_pred CCHHHHHHHHHHHHH-cCCCCchhhhcccChHHHH----HHHHHHHHHhCCC-C----EEEECcHHHHHHHHHHHHhcCC
Confidence 589999999988865 432322222 222222233 3558899999964 3 8999999888776777664 4
Q ss_pred CCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHh---hcCCcEEEEcCCCC--CCc
Q 022564 135 PHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSAT---LFRPKLIVAGASAY--ARL 209 (295)
Q Consensus 135 ~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~---~~~tk~i~l~~~n~--~~~ 209 (295)
+||.|++....|.+... .+...|.++..++ . .|.+++++.++ ..++++|+++++++ |..
T Consensus 131 ~g~~vi~~~~~h~s~~~--------~~~~~g~~~~~~~--~------~d~~~l~~~l~~~~~~~t~~v~i~~~~n~tG~~ 194 (410)
T PRK13392 131 PGCVILSDALNHASMIE--------GIRRSGAEKQVFR--H------NDLADLEEQLASVDPDRPKLIAFESVYSMDGDI 194 (410)
T ss_pred CCCEEEEehhhhHHHHH--------HHHHcCCeEEEEe--C------CCHHHHHHHHHhccCCCCEEEEEeCCCCCCccc
Confidence 89988887766766543 2234454443332 1 14556666554 23788999875555 478
Q ss_pred cCHHHHHHHHHHcCCEEEEEcccccccccc-C--CC-CCCC-CcceEEEeCCCCCCCCCceEEEEEeCCchhh
Q 022564 210 YDYERIRKVCNKQKAIMLADMAHISGLVAA-G--VI-PSPF-EYADVVTTTTHKSLRGPRGAMIFFRKGVKEI 277 (295)
Q Consensus 210 ~~l~~I~~ia~~~~~~vivD~a~~~g~~~~-~--~~-~~~~-~~~D~~~~s~~K~l~gp~gG~l~~~~~~~~~ 277 (295)
.|+++|.++|++||+++++|++|+.|.+.. + .. ..++ ...|+++.+++|+|+++ ||++++++++.+.
T Consensus 195 ~~l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~g~~-GG~~~~~~~~~~~ 266 (410)
T PRK13392 195 APIEAICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAFGCL-GGYIAASADLIDF 266 (410)
T ss_pred ccHHHHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEChHhhhcc-cchhhcCHHHHHH
Confidence 899999999999999999999999776531 1 10 0111 23689999999998664 5888888776653
No 231
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.66 E-value=8.7e-16 Score=139.56 Aligned_cols=159 Identities=23% Similarity=0.236 Sum_probs=112.0
Q ss_pred cchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCcccccccccccccee
Q 022564 87 NEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSI 166 (295)
Q Consensus 87 ~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~ 166 (295)
++....++ +.++.+.|.+. .+.+.||..|+.+++.+++++||+|+++...|++........ ....|.
T Consensus 54 nPt~~~le----~~la~Le~g~~-----a~~~~SGmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~----l~~~gv 120 (386)
T PF01053_consen 54 NPTVRALE----QRLAALEGGED-----ALLFSSGMAAISAALLALLKPGDHIVASDDLYGGTYRLLEEL----LPRFGV 120 (386)
T ss_dssp -HHHHHHH----HHHHHHHT-SE-----EEEESSHHHHHHHHHHHHS-TTBEEEEESSSSHHHHHHHHHC----HHHTTS
T ss_pred cccHHHHH----HHHHHhhcccc-----eeeccchHHHHHHHHHhhcccCCceEecCCccCcchhhhhhh----hcccCc
Confidence 34445555 78888888754 688889999988899999999999999997777764433211 112343
Q ss_pred eeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEc-CCCCC-CccCHHHHHHHHHHcC-CEEEEEccccccccccCCCC
Q 022564 167 FFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASAYA-RLYDYERIRKVCNKQK-AIMLADMAHISGLVAAGVIP 243 (295)
Q Consensus 167 ~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~-~~n~~-~~~~l~~I~~ia~~~~-~~vivD~a~~~g~~~~~~~~ 243 (295)
++ ..+ | .-|++++++++++ +|++|++- ++|+. .+.|+++|+++|+++| +++++|++.+.+. ..
T Consensus 121 ~v--~~~--d----~~d~~~l~~~l~~-~t~~v~~EspsNP~l~v~Dl~~i~~~a~~~g~~~~vVDnT~atp~-----~~ 186 (386)
T PF01053_consen 121 EV--TFV--D----PTDLEALEAALRP-NTKLVFLESPSNPTLEVPDLEAIAKLAKEHGDILVVVDNTFATPY-----NQ 186 (386)
T ss_dssp EE--EEE--S----TTSHHHHHHHHCT-TEEEEEEESSBTTTTB---HHHHHHHHHHTTT-EEEEECTTTHTT-----TC
T ss_pred EE--EEe--C----chhHHHHHhhccc-cceEEEEEcCCCcccccccHHHHHHHHHHhCCceEEeecccccee-----ee
Confidence 33 332 2 2389999999988 99999996 55543 8889999999999998 9999999955442 22
Q ss_pred CCCC-cceEEEeCCCCCCCCCc---eEEEEEeC
Q 022564 244 SPFE-YADVVTTTTHKSLRGPR---GAMIFFRK 272 (295)
Q Consensus 244 ~~~~-~~D~~~~s~~K~l~gp~---gG~l~~~~ 272 (295)
.|+. |+|+++.|+.|+++|.. ||++++++
T Consensus 187 ~pL~~GaDivv~S~TKyl~Ghsdv~~G~vv~~~ 219 (386)
T PF01053_consen 187 NPLELGADIVVHSATKYLSGHSDVMGGAVVVNG 219 (386)
T ss_dssp -GGGGT-SEEEEETTTTTTTSSSE-EEEEEESS
T ss_pred ccCcCCceEEEeeccccccCCcceeeEEEEECc
Confidence 2344 59999999999998876 58888876
No 232
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.66 E-value=3.3e-15 Score=137.89 Aligned_cols=204 Identities=20% Similarity=0.214 Sum_probs=131.8
Q ss_pred cCceecCCCC---CCCHHHHHHHhhhhhccCCCCCCCCc-ccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCCh
Q 022564 47 KGLELIPSEN---FTSVSVMQAVGSVMTNKYSEGYPGAR-YYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 122 (295)
Q Consensus 47 ~~i~L~~~~~---~~~~~v~~al~~~l~~~~~~g~~~~~-~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~ 122 (295)
+.+++..++- ..+|++++++.+.+.. +..+..+++ .++..... .++++.+++++|.+. .+++++|+
T Consensus 47 ~~~~~~s~dylgl~~~p~v~~a~~~~~~~-~~~~~~~s~~~~g~~~~~----~~l~~~la~~~g~~~-----~~~~~sG~ 116 (407)
T PRK09064 47 EVTVWCSNDYLGMGQHPKVIEAMIEALDR-CGAGAGGTRNISGTNHYH----VELERELADLHGKEA-----ALVFTSGY 116 (407)
T ss_pred eEEEEECCCCcCCCCCHHHHHHHHHHHHH-cCCCCCCcCcCccCHHHH----HHHHHHHHHHhCCCc-----EEEECcHH
Confidence 3466654433 2488999999988865 422322222 22222233 345588888888542 78999998
Q ss_pred HHHHHHHHhhcC--CCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhh---cCCc
Q 022564 123 PSNFQVYTALLK--PHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL---FRPK 197 (295)
Q Consensus 123 ~a~~~~~~al~~--~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~---~~tk 197 (295)
.++..++..+.. +++.|+.....|.+... ++...+... ..++ ..|++++++.++. .+++
T Consensus 117 ~an~~ai~~l~~~~~~~~i~~~~~~h~s~~~--------~~~~~~~~~--~~~~------~~d~~~le~~l~~~~~~~~~ 180 (407)
T PRK09064 117 VSNDATLSTLAKLIPDCVIFSDELNHASMIE--------GIRRSRCEK--HIFR------HNDVAHLEELLAAADPDRPK 180 (407)
T ss_pred HHHHHHHHHHhCCCCCCEEEEeCcchHHHHH--------HHHHcCCcE--EEEC------CCCHHHHHHHHHhccCCCCe
Confidence 887767776654 77766666555554432 222333322 2212 1378888888762 3678
Q ss_pred EEEEcCCCC--CCccCHHHHHHHHHHcCCEEEEEcccccccccc-C--C-CCCCC-CcceEEEeCCCCCCCCCceEEEEE
Q 022564 198 LIVAGASAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAA-G--V-IPSPF-EYADVVTTTTHKSLRGPRGAMIFF 270 (295)
Q Consensus 198 ~i~l~~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~-~--~-~~~~~-~~~D~~~~s~~K~l~gp~gG~l~~ 270 (295)
+|+++++++ |...|+++|.++|++||+++++|++|+.|.+.. + . ...++ ...|+++.+++|.| |..||++++
T Consensus 181 ~v~~~~v~s~~G~~~~l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~-g~~GG~~~~ 259 (407)
T PRK09064 181 LIAFESVYSMDGDIAPIAEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAF-GVMGGYIAG 259 (407)
T ss_pred EEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEEEecchhh-hccCceEec
Confidence 888874433 578899999999999999999999998775421 1 1 11111 13689999999988 456799998
Q ss_pred eCCchhh
Q 022564 271 RKGVKEI 277 (295)
Q Consensus 271 ~~~~~~~ 277 (295)
++++.+.
T Consensus 260 ~~~~~~~ 266 (407)
T PRK09064 260 SAALVDA 266 (407)
T ss_pred CHHHHHH
Confidence 8876554
No 233
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.65 E-value=2.7e-15 Score=135.96 Aligned_cols=196 Identities=18% Similarity=0.175 Sum_probs=128.8
Q ss_pred CceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-H
Q 022564 48 GLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-S 124 (295)
Q Consensus 48 ~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a 124 (295)
.++|..++++ +|+.+.+++.+.+.... .||. ....+ +|+.++++++++++ +|++|+|++ +
T Consensus 21 ~~~l~~~~~~~~~p~~~~~a~~~~~~~~~--~Y~~-------~~~~~----lr~~ia~~~~~~~~----~i~it~Ga~~~ 83 (354)
T PRK06358 21 ILDFSANINPLGVPESLKQAITENLDKLV--EYPD-------PDYLE----LRKRIASFEQLDLE----NVILGNGATEL 83 (354)
T ss_pred eEEecCCCCCCCCCHHHHHHHHHHHHhhh--cCCC-------ccHHH----HHHHHHHHhCCChh----hEEECCCHHHH
Confidence 5888888774 57889999888764311 2322 12233 55778888899887 899999999 7
Q ss_pred HHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCC-CCCCCCHHHHHHHHhhcCCcEEEEcC
Q 022564 125 NFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE-STGYIDYDQLEKSATLFRPKLIVAGA 203 (295)
Q Consensus 125 ~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~id~e~l~~~i~~~~tk~i~l~~ 203 (295)
+..++.++ .+ +.|+++.|.|+.+ ...+...|.++..++ ++. +++.+| +++.+.+.+ ++++++++.
T Consensus 84 l~~~~~~~-~~-~~v~i~~P~y~~~--------~~~~~~~g~~~~~~~--~~~~~~~~~d-~~~~~~~~~-~~~~v~~~~ 149 (354)
T PRK06358 84 IFNIVKVT-KP-KKVLILAPTFAEY--------ERALKAFDAEIEYAE--LTEETNFAAN-EIVLEEIKE-EIDLVFLCN 149 (354)
T ss_pred HHHHHHHh-CC-CcEEEecCChHHH--------HHHHHHcCCeeEEEe--CccccCCCcc-HHHHHhhcc-CCCEEEEeC
Confidence 77666665 44 6899999555444 333445665554454 442 346789 666666665 799998886
Q ss_pred CCCC--Ccc---CHHHHHHHHHHcCCEEEEEccccccccccCCCCCCC---C--cceEEEeCCCCCCC--CCceEEEEEe
Q 022564 204 SAYA--RLY---DYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPF---E--YADVVTTTTHKSLR--GPRGAMIFFR 271 (295)
Q Consensus 204 ~n~~--~~~---~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~---~--~~D~~~~s~~K~l~--gp~gG~l~~~ 271 (295)
|||| ... .+++|.++|++|++++|+|+++..- ...+.....+ . ..-+++.|++|+|+ |.+-|+++..
T Consensus 150 P~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~-~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~ 228 (354)
T PRK06358 150 PNNPTGQLISKEEMKKILDKCEKRNIYLIIDEAFMDF-LEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTS 228 (354)
T ss_pred CCCCCCCccCHHHHHHHHHHHHhcCCEEEEeCccccc-CCCccchhHHHhccCCCCEEEEEechhhccCcchhheeeecC
Confidence 6664 334 4778889999999999999996422 2211111101 1 12377999999875 4455999885
Q ss_pred -CCch
Q 022564 272 -KGVK 275 (295)
Q Consensus 272 -~~~~ 275 (295)
+.+.
T Consensus 229 ~~~~~ 233 (354)
T PRK06358 229 NKNLA 233 (354)
T ss_pred CHHHH
Confidence 4543
No 234
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.65 E-value=3.4e-15 Score=138.24 Aligned_cols=217 Identities=13% Similarity=0.121 Sum_probs=133.8
Q ss_pred HcCceecCCCCC--C--CHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCC--CCCCcceeEEeC
Q 022564 46 WKGLELIPSENF--T--SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWGVNVQSL 119 (295)
Q Consensus 46 ~~~i~L~~~~~~--~--~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~--~~~~~~~~v~~~ 119 (295)
.+.|+|..+.+. + .+.+.+++.+.+...- -......|+...+..++++++.+++.+.+|. +++ +|++|
T Consensus 30 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~----~I~it 103 (416)
T PRK09440 30 PGAIMLGGGNPAHIPEMEDYFRDLLADLLASGK--LTEALGNYDGPQGKDELIEALAALLNERYGWNISPQ----NIALT 103 (416)
T ss_pred CCceeccCCCCCccCCHHHHHHHHHHHHhcCcc--cccccccCCCCCCCHHHHHHHHHHHHHHhCCCCChh----hEEEc
Confidence 356899877653 2 2345566655543310 0011123555566788998899999887774 665 89999
Q ss_pred CChH-HHHHHHHhhcC-----CCCeEEE-ecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHh
Q 022564 120 SGSP-SNFQVYTALLK-----PHDRIMA-LDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSAT 192 (295)
Q Consensus 120 sG~~-a~~~~~~al~~-----~gd~Vl~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~ 192 (295)
+|++ ++..++.++++ +||.|++ .+|.|+++....... ++ ..+.....++++.+...+.+|+++++ +.
T Consensus 104 ~Ga~~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~d~~~l~--~~ 177 (416)
T PRK09440 104 NGSQSAFFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLEE---DL-FVSYRPNIELLPEGQFKYHVDFEHLH--ID 177 (416)
T ss_pred cChHHHHHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhcc---Cc-eeecccccccccccccccCCCHHHcc--cC
Confidence 9999 87778888874 6899999 687777664321100 00 11111222332211013578999997 34
Q ss_pred hcCCcEEEEcCCCCC--Ccc---CHHHHHHHHHHcCCEEEEEcccccccccc---CCCCCCCCcceEEEeCCCCC-CCCC
Q 022564 193 LFRPKLIVAGASAYA--RLY---DYERIRKVCNKQKAIMLADMAHISGLVAA---GVIPSPFEYADVVTTTTHKS-LRGP 263 (295)
Q Consensus 193 ~~~tk~i~l~~~n~~--~~~---~l~~I~~ia~~~~~~vivD~a~~~g~~~~---~~~~~~~~~~D~~~~s~~K~-l~gp 263 (295)
+ +++++++++|||| ... .+++|+++|++|+++||+|+++....... ...+. ....-+++.|++|+ +.|.
T Consensus 178 ~-~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~-~~~~vI~~~SfSK~~~pGl 255 (416)
T PRK09440 178 E-DTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPGIIFSEATPL-WNPNIILCMSLSKLGLPGV 255 (416)
T ss_pred C-CceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCCcchhhcCcc-ccCCeEEEecccccCCCcc
Confidence 4 7889999866664 343 47788899999999999999975311100 11000 01133778999995 2344
Q ss_pred ceEEEEEeCCchh
Q 022564 264 RGAMIFFRKGVKE 276 (295)
Q Consensus 264 ~gG~l~~~~~~~~ 276 (295)
+-|++++++++.+
T Consensus 256 RiG~~i~~~~l~~ 268 (416)
T PRK09440 256 RCGIVIADEEIIE 268 (416)
T ss_pred eEEEEeCCHHHHH
Confidence 5599998877654
No 235
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.65 E-value=1.9e-15 Score=141.07 Aligned_cols=179 Identities=17% Similarity=0.186 Sum_probs=130.8
Q ss_pred ccCCcchHHHHHHHHHHHHHHHcCC--CCCCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCcccccccc
Q 022564 83 YYGGNEYIDMAESLCQKRALEAFRL--DPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTK 159 (295)
Q Consensus 83 ~~~~~~~~~~l~~~~~~~la~~~g~--~~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~ 159 (295)
+|+...+...+++.+.+++....|+ +++ +|++|+|+. ++..++..+++|||.|++-+|.|.+...
T Consensus 127 ~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~----~IiiT~G~q~al~l~~~~l~~pGd~v~vE~PtY~~~~~-------- 194 (459)
T COG1167 127 QYGPTAGLPELREAIAAYLLARRGISCEPE----QIVITSGAQQALDLLLRLLLDPGDTVLVEDPTYPGALQ-------- 194 (459)
T ss_pred cCCCCCCcHHHHHHHHHHHHHhcCCccCcC----eEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCcHHHHH--------
Confidence 3555577888998888888866665 554 899999999 8887888899999999999976666654
Q ss_pred ccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEc--CCCC-CCccC---HHHHHHHHHHcCCEEEEEcccc
Q 022564 160 KISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG--ASAY-ARLYD---YERIRKVCNKQKAIMLADMAHI 233 (295)
Q Consensus 160 ~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~--~~n~-~~~~~---l~~I~~ia~~~~~~vivD~a~~ 233 (295)
..+..|.++ +++++| +..+|+|++++.++..++|+++++ ..|+ |...+ -++|.++|++||++||.|...+
T Consensus 195 ~~~~~g~~~--~~vp~d--~~G~~~e~le~~~~~~~~k~~y~~P~~qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~ 270 (459)
T COG1167 195 ALEALGARV--IPVPVD--EDGIDPEALEEALAQWKPKAVYVTPTFQNPTGVTMSLERRKALLALAEKYDVLIIEDDYYG 270 (459)
T ss_pred HHHHcCCcE--EecCCC--CCCCCHHHHHHHHhhcCCcEEEECCCCCCCCCCccCHHHHHHHHHHHHHcCCeEEeeCcch
Confidence 333566444 554555 457899999999987789999996 4444 34444 4499999999999999999965
Q ss_pred ccccccCCCCCCCC-----cceEEEeCCCCCCC-CCceEEEEEeCCchhhh
Q 022564 234 SGLVAAGVIPSPFE-----YADVVTTTTHKSLR-GPRGAMIFFRKGVKEIN 278 (295)
Q Consensus 234 ~g~~~~~~~~~~~~-----~~D~~~~s~~K~l~-gp~gG~l~~~~~~~~~~ 278 (295)
.-.... ....++. +.-+.++|++|++. |-+.|+++..+++.+..
T Consensus 271 el~~~~-~p~~~l~~ld~~~rViy~gSFSK~l~PglRlG~vv~p~~~~~~~ 320 (459)
T COG1167 271 ELRYDG-PPPPPLKALDAPGRVIYLGSFSKTLAPGLRLGYVVAPPELIEKL 320 (459)
T ss_pred hhhcCC-CCCCChHhhCCCCCEEEEeeehhhcccccceeeeeCCHHHHHHH
Confidence 332221 1111121 34588999999873 44559999998865543
No 236
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.65 E-value=1.2e-15 Score=151.80 Aligned_cols=171 Identities=16% Similarity=0.114 Sum_probs=120.4
Q ss_pred chHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhh----cCCCC----eEEEecCCCCcccCcccccccc
Q 022564 88 EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTAL----LKPHD----RIMALDLPHGGHLSHGYQTDTK 159 (295)
Q Consensus 88 ~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al----~~~gd----~Vl~~~~~~~~~~~~~~~~~~~ 159 (295)
++..+++.++++++++++|.+. +.+...+|+.++.+.+.++ .++|| .|++++..|+++...
T Consensus 538 qG~l~~i~e~q~~l~eltG~d~----~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~s------- 606 (954)
T PRK05367 538 AGYRELIDQLEAWLAEITGYDA----VSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPAS------- 606 (954)
T ss_pred HHHHHHHHHHHHHHHHHHCCCC----EEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHH-------
Confidence 3455677778899999999874 2444333433664433333 35666 599999999888543
Q ss_pred ccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhc--CCcEEEEcCCCC-CC-ccCHHHHHHHHHHcCCEEEEEcccccc
Q 022564 160 KISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF--RPKLIVAGASAY-AR-LYDYERIRKVCNKQKAIMLADMAHISG 235 (295)
Q Consensus 160 ~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~--~tk~i~l~~~n~-~~-~~~l~~I~~ia~~~~~~vivD~a~~~g 235 (295)
+...|.+++.++ ++ .++.+|+++|++++++. ++.+|+++.+++ |. ..|+++|+++||++|+++++|+||..+
T Consensus 607 -a~~~G~~vv~v~--~d-~~G~iD~~~L~~~i~~~~~~la~V~it~pst~G~~e~~I~eI~~i~h~~G~~v~VDgA~~~a 682 (954)
T PRK05367 607 -AVMAGMKVVVVA--CD-ENGNIDLDDLRAKAEEHADNLAAIMITYPSTHGVFEETIREICEIVHEHGGQVYLDGANMNA 682 (954)
T ss_pred -HHHCCCEEEEEC--CC-CCCCcCHHHHHHHHhccCCCeEEEEEEcCCCCeeecCCHHHHHHHHHHcCCEEEEECcChhh
Confidence 235665565554 55 46899999999999753 456666664444 54 478999999999999999999999876
Q ss_pred ccccCCCCCCCCcceEEEeCCCCCCCCCce------EEEEEeCCch
Q 022564 236 LVAAGVIPSPFEYADVVTTTTHKSLRGPRG------AMIFFRKGVK 275 (295)
Q Consensus 236 ~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g------G~l~~~~~~~ 275 (295)
.+.... ..-.|+|++++|+||||++|.| |++++++.+.
T Consensus 683 l~~l~~--pg~~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~~l~ 726 (954)
T PRK05367 683 QVGLAR--PGDIGADVSHLNLHKTFCIPHGGGGPGVGPIGVKAHLA 726 (954)
T ss_pred ccCCCC--hhhcCCCEEEecCcccCCCCcCCCCCceEEEeeccccc
Confidence 655331 1123699999999999975554 5899886543
No 237
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.65 E-value=3.3e-15 Score=136.46 Aligned_cols=187 Identities=13% Similarity=0.100 Sum_probs=122.2
Q ss_pred cCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCcccccccccccc
Q 022564 84 YGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISA 163 (295)
Q Consensus 84 ~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~ 163 (295)
|++.+...++| +.+++++|.+. .|.+.||+.|+..++...++|||.| +...|-... .. .+..
T Consensus 74 Yagd~s~~~LE----~~vAe~lG~e~-----aV~v~sGTaAl~ll~~l~v~pGd~V--p~n~~f~Tt---~a----hI~~ 135 (460)
T PRK13237 74 YAGSRNFYHLE----ETVQEYYGFKH-----VVPTHQGRGAENLLSRIAIKPGQYV--PGNMYFTTT---RY----HQEL 135 (460)
T ss_pred hcCCCcHHHHH----HHHHHHHCCCe-----EEEeCCHHHHHHHHHHhCCCCcCEE--CCccchHhh---HH----HHHh
Confidence 56666677777 77888899886 6777788877664544458999975 332222111 10 1223
Q ss_pred ceeeeEEEeee---------cCCCCCCCCHHHHHHHHhhc---CCcEEEEc-CCCC--CC---ccCHHHHHHHHHHcCCE
Q 022564 164 VSIFFETMPYR---------LNESTGYIDYDQLEKSATLF---RPKLIVAG-ASAY--AR---LYDYERIRKVCNKQKAI 225 (295)
Q Consensus 164 ~g~~~~~v~~~---------~~~~~~~id~e~l~~~i~~~---~tk~i~l~-~~n~--~~---~~~l~~I~~ia~~~~~~ 225 (295)
.|.. .+.+. .++.++.+|+++++++|++. +++++.+. ..|. |. ..++++|.++|++||+.
T Consensus 136 ~Ga~--fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~ 213 (460)
T PRK13237 136 NGGI--FVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIK 213 (460)
T ss_pred CCcE--EEeeecccccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCE
Confidence 4432 22211 12356899999999999752 23344432 2222 33 45789999999999999
Q ss_pred EEEEccccccccc------cCCCCCC--------CCcceEEEeCCCCCCCCCceEEEEEeCCchhhhccCCeeEEEeEE
Q 022564 226 MLADMAHISGLVA------AGVIPSP--------FEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEFTCRCFM 290 (295)
Q Consensus 226 vivD~a~~~g~~~------~~~~~~~--------~~~~D~~~~s~~K~l~gp~gG~l~~~~~~~~~~~~~~~~~~~~~~ 290 (295)
||.|+||.+|... .+....+ +..+|.+++|++|.+.+|.||+++++++-....-+...+.|.+|.
T Consensus 214 Vi~DaAra~gna~fI~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~~GG~i~t~D~eL~~~~r~~~~~~eG~~ 292 (460)
T PRK13237 214 VFFDATRCVENAYFIKEREEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLVNIGGFLAMNDEELFDEAKELVVVYEGMP 292 (460)
T ss_pred EEEECcchhcChhhhcccccccCCCcHhHHhhhccCcCcEEEEeCCCCCCCCCceEEEECCHHHHHHHHHhccccCCCc
Confidence 9999999998442 1122222 236999999999999999999999998744334455666776663
No 238
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.64 E-value=5.2e-16 Score=140.67 Aligned_cols=163 Identities=18% Similarity=0.158 Sum_probs=114.6
Q ss_pred HHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhhcCCC-CeEEEecCCCCcccCccccccccccccceeeeEEEeee
Q 022564 97 CQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPH-DRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYR 174 (295)
Q Consensus 97 ~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al~~~g-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 174 (295)
+++.+++++|++++ +|++|+|++ ++..++.+++++| |+|+++.|.|+. +...+...|.++..++
T Consensus 65 Lr~aia~~~~~~~~----~I~it~Gs~~~i~~~~~~~~~~g~d~vlv~~P~y~~--------y~~~~~~~g~~v~~v~-- 130 (354)
T PRK04635 65 LINAYSAYAGVAPE----QILTSRGADEAIELLIRAFCEPGQDSIACFGPTYGM--------YAISAETFNVGVKALP-- 130 (354)
T ss_pred HHHHHHHHhCcCHH----HEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHH--------HHHHHHHcCCEEEEEe--
Confidence 44777888899987 899999999 8887888899999 899999954443 3333445665565554
Q ss_pred cCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccCHHHHHHHHHHc-CCEEEEEccccccccccCCCCC-CCCcce
Q 022564 175 LNESTGYIDYDQLEKSATLFRPKLIVAGASAYA--RLYDYERIRKVCNKQ-KAIMLADMAHISGLVAAGVIPS-PFEYAD 250 (295)
Q Consensus 175 ~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~~--~~~~l~~I~~ia~~~-~~~vivD~a~~~g~~~~~~~~~-~~~~~D 250 (295)
++ +++.+|++.+++ + + ++|+|+++++||| ...+.+++.++++.. +++||+|+++............ .....-
T Consensus 131 ~~-~~~~~~~~~l~~-~-~-~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~~~~vivDeay~~~~~~~s~~~~~~~~~~~ 206 (354)
T PRK04635 131 LT-ADYQLPLDYIEQ-L-D-GAKLVFICNPNNPTGTVIDRADIEQLIEMTPDAIVVVDEAYIEFCPEYSVADLLASYPNL 206 (354)
T ss_pred cC-CCCCCCHHHHHh-c-c-CCCEEEEeCCCCCCCccCCHHHHHHHHHhCCCcEEEEeCchHhhccCcchHHHHhhCCCE
Confidence 44 457899999873 4 4 8999999866664 788899999988764 7999999997532211000000 000022
Q ss_pred EEEeCCCCCCC--CCceEEEEEeCCchhh
Q 022564 251 VVTTTTHKSLR--GPRGAMIFFRKGVKEI 277 (295)
Q Consensus 251 ~~~~s~~K~l~--gp~gG~l~~~~~~~~~ 277 (295)
+++.|++|+++ |.+-|+++.++++.+.
T Consensus 207 iv~~S~SK~~~l~GlRlG~~i~~~~~~~~ 235 (354)
T PRK04635 207 VVLRTLSKAFALAGARCGFTLANEELIEI 235 (354)
T ss_pred EEEechHHHhhhhHHHHhhhhCCHHHHHH
Confidence 67899999874 3334999998877654
No 239
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.64 E-value=2.7e-15 Score=130.57 Aligned_cols=162 Identities=17% Similarity=0.154 Sum_probs=118.4
Q ss_pred chHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceee
Q 022564 88 EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIF 167 (295)
Q Consensus 88 ~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~ 167 (295)
+..+.+| ++++.+-|--. .+.+.||..|...++..++.+||+|+....-|++.+...... ....|.+
T Consensus 62 PT~~vlE----~RiAaLEGG~a-----a~a~aSG~AA~~~ai~~la~aGD~iVss~~LYGGT~~lf~~t----l~~~Gi~ 128 (426)
T COG2873 62 PTTDVLE----ERIAALEGGVA-----ALAVASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNLFSHT----LKRLGIE 128 (426)
T ss_pred chHHHHH----HHHHHhhcchh-----hhhhccchHHHHHHHHHhccCCCeeEeeccccCchHHHHHHH----HHhcCcE
Confidence 4445555 77877766544 577889988888899999999999999998888876533222 1234544
Q ss_pred eEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEc-CCCCC-CccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCC
Q 022564 168 FETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASAYA-RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP 245 (295)
Q Consensus 168 ~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~-~~n~~-~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~ 245 (295)
+..+ + ..|++.+++++++ +||+|++- -.|+. .+.|++.|+++||++|+++|+|.+-+.+.+- .|
T Consensus 129 v~fv----d----~~d~~~~~~aI~~-nTkavf~EtigNP~~~v~Die~ia~iAh~~gvpliVDNT~atpyl~-----rP 194 (426)
T COG2873 129 VRFV----D----PDDPENFEAAIDE-NTKAVFAETIGNPGLDVLDIEAIAEIAHRHGVPLIVDNTFATPYLC-----RP 194 (426)
T ss_pred EEEe----C----CCCHHHHHHHhCc-ccceEEEEeccCCCccccCHHHHHHHHHHcCCcEEEecCCCcceec-----ch
Confidence 4333 2 2379999999998 99999995 66664 8899999999999999999999994443222 23
Q ss_pred CC-cceEEEeCCCCCCCCCce---EEEEEeCCchh
Q 022564 246 FE-YADVVTTTTHKSLRGPRG---AMIFFRKGVKE 276 (295)
Q Consensus 246 ~~-~~D~~~~s~~K~l~gp~g---G~l~~~~~~~~ 276 (295)
+. |+|+++.|..||++|..- |+++-.-.+.+
T Consensus 195 ~~hGADIVvHS~TK~igGhGt~iGG~iVD~G~FDw 229 (426)
T COG2873 195 IEHGADIVVHSATKYIGGHGTAIGGVIVDGGKFDW 229 (426)
T ss_pred hhcCCCEEEEeecccccCCccccceEEEeCCcccc
Confidence 44 699999999999987543 44444444443
No 240
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.64 E-value=2.3e-15 Score=136.93 Aligned_cols=154 Identities=18% Similarity=0.175 Sum_probs=105.0
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeee
Q 022564 89 YIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFF 168 (295)
Q Consensus 89 ~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 168 (295)
...+++ +.++++. ..+ .+++++|+.++.+++.+++++||+|+++++.|+++...... .+...|.++
T Consensus 52 ~~~~Le----~~lA~l~--~~~----~v~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~~~~~~~~----~l~~~G~~v 117 (366)
T PRK07582 52 TWRALE----AALGELE--GAE----ALVFPSGMAAITAVLRALLRPGDTVVVPADGYYQVRALARE----YLAPLGVTV 117 (366)
T ss_pred cHHHHH----HHHHHHc--CCC----EEEECCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHH----HHhcCeEEE
Confidence 344555 6777777 233 78888888888778888999999999998766554321110 111245444
Q ss_pred EEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCC
Q 022564 169 ETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYA--RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPF 246 (295)
Q Consensus 169 ~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~~--~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~ 246 (295)
..++ .+ +. .+ .+.+ ++++|+++.++|| ...|+++|+++|+++|+++++|++|+... +..+..
T Consensus 118 ~~v~--~~-~~----~~----~~~~-~t~lV~le~p~NPtg~v~di~~I~~~a~~~g~~lvVD~t~~~~~---~~~p~~- 181 (366)
T PRK07582 118 REAP--TA-GM----AE----AALA-GADLVLAETPSNPGLDVCDLAALAAAAHAAGALLVVDNTTATPL---GQRPLE- 181 (366)
T ss_pred EEEC--CC-Ch----HH----Hhcc-CceEEEEECCCCCCCCccCHHHHHHHHHHcCCEEEEECCCCCcc---ccCchh-
Confidence 4443 32 11 11 2234 7999999866664 67899999999999999999999975321 121111
Q ss_pred CcceEEEeCCCCCCCCCce---EEEEEeC
Q 022564 247 EYADVVTTTTHKSLRGPRG---AMIFFRK 272 (295)
Q Consensus 247 ~~~D~~~~s~~K~l~gp~g---G~l~~~~ 272 (295)
.++|+++.|+|||++||.| |++++++
T Consensus 182 ~g~Divv~S~sK~l~G~~g~~~G~v~~~~ 210 (366)
T PRK07582 182 LGADLVVASDTKALTGHSDLLLGYVAGRD 210 (366)
T ss_pred cCCcEEEecccccccCCCCeeEEEEEcCc
Confidence 1589999999999999875 8888754
No 241
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.64 E-value=3.5e-15 Score=134.66 Aligned_cols=196 Identities=13% Similarity=0.106 Sum_probs=132.1
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccC---CcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCC-hH-HHHHHHHhh
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYG---GNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSG-SP-SNFQVYTAL 132 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~---~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG-~~-a~~~~~~al 132 (295)
.|.+|++++.+.+.+ +. +.+...+. ......++.+.+++.++++++.+.+. +|++++| ++ ++.+++..+
T Consensus 3 ~p~~v~~~~~~~~~~-~~--~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~---~v~~~~gsgT~a~ea~~~nl 76 (349)
T TIGR01364 3 LPEEVLEQAQKELLN-FN--GTGMSVMEISHRSKEFEAVANEAESDLRELLNIPDNY---EVLFLQGGATGQFAAVPLNL 76 (349)
T ss_pred CCHHHHHHHHHHHhC-cc--CCCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCc---eEEEEcCCchHHHHHHHHhc
Confidence 588999999998875 22 11111111 11233467778999999999974332 6777666 44 888899999
Q ss_pred cCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecC-CCCCCCCHHHHHHHHhhcCCcEEEEc--CCCCCCc
Q 022564 133 LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN-ESTGYIDYDQLEKSATLFRPKLIVAG--ASAYARL 209 (295)
Q Consensus 133 ~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~~~id~e~l~~~i~~~~tk~i~l~--~~n~~~~ 209 (295)
+.+||++++......++.. .+.++..|. +..+..+-. +....+|+++++ +++ ++++|.++ .+..|..
T Consensus 77 ~~~~~~~l~i~~G~fg~r~------~~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~v~~th~ETstGv~ 146 (349)
T TIGR01364 77 LAEGKVADYIVTGAWSKKA------AKEAKKYGV-VNVVASGKEGNYTKIPDPSTWE--ISE-DAAYVHYCANETIHGVE 146 (349)
T ss_pred CCCCCeEEEEECCHHHHHH------HHHHHHhCC-cEEEeccccCCCCCCCCHHhcC--CCC-CCCEEEEcCCCCcccEe
Confidence 9999999988733322211 123344554 444432201 012356777665 334 78988885 4444555
Q ss_pred cCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCce-EEEEEeCCchhhhcc
Q 022564 210 YDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQ 280 (295)
Q Consensus 210 ~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~~~~ 280 (295)
.+ ++++.+++++++|+++++|..+.++.. .|++++|+||+| ||+| |++++++++.+....
T Consensus 147 ~~-----~l~~~~~~l~iVDavss~g~~~id~~~-----~d~~~~ssqK~l-gP~Glg~l~~s~~~~~~~~~ 207 (349)
T TIGR01364 147 FR-----ELPDVKNAPLVADMSSNILSRPIDVSK-----FGLIYAGAQKNI-GPAGLTVVIVRKDLLGRASR 207 (349)
T ss_pred cc-----eecccCCCeEEEEccccccCccCCHHH-----ccEEEEeccccc-CCCceEEEEECHHHHhhccc
Confidence 44 677788999999999999999988764 569999999988 5999 999999998765433
No 242
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.63 E-value=5.2e-15 Score=131.06 Aligned_cols=171 Identities=16% Similarity=0.128 Sum_probs=128.9
Q ss_pred chHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH---HHHHHHHhhc-CC----CCeEEEecCCCCcccCcccccccc
Q 022564 88 EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP---SNFQVYTALL-KP----HDRIMALDLPHGGHLSHGYQTDTK 159 (295)
Q Consensus 88 ~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~---a~~~~~~al~-~~----gd~Vl~~~~~~~~~~~~~~~~~~~ 159 (295)
++..++...+++|+++..|.|. +.+...+|+. +-++++.++- .. .+.+|+++-.|+.+..
T Consensus 105 qG~l~li~~Lq~~L~~ITG~Da----vsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPA-------- 172 (496)
T COG1003 105 QGYLELIYELQEWLKEITGMDA----VSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNPA-------- 172 (496)
T ss_pred HHHHHHHHHHHHHHHHhcCCce----eeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCChh--------
Confidence 4456777778899999999987 5888999998 3333666662 33 3689999999998854
Q ss_pred ccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCC-C-CccCHHHHHHHHHHcCCEEEEEcccccccc
Q 022564 160 KISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY-A-RLYDYERIRKVCNKQKAIMLADMAHISGLV 237 (295)
Q Consensus 160 ~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~-~-~~~~l~~I~~ia~~~~~~vivD~a~~~g~~ 237 (295)
.+.+.|.++ +.++++ +++.+|+|+|++++.+ ++.++++++||. | ...++.+|+++.|++|..|..|+|..-+.+
T Consensus 173 SAam~G~~V--V~V~~~-~~G~VDlddLk~k~~~-~~AalMiTnPsT~GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA~v 248 (496)
T COG1003 173 SAAMAGFKV--VVVKCD-ENGNVDLDDLRAKAED-NLAALMITNPSTLGVFEEDIREICEIVHEAGGQVYYDGANLNAIV 248 (496)
T ss_pred hHhhcCceE--EEEecC-CCCCccHHHHHHHhcc-ceeEEEeccCcccccchhhHHHHHHHHHHcCCEEEecCcchhhhh
Confidence 233677545 555566 7899999999999987 999999987666 5 677899999999999999999999755444
Q ss_pred ccCCCCCCCCcceEEEeCCCCCCCCCce------EEEEEeCCchh
Q 022564 238 AAGVIPSPFEYADVVTTTTHKSLRGPRG------AMIFFRKGVKE 276 (295)
Q Consensus 238 ~~~~~~~~~~~~D~~~~s~~K~l~gp~g------G~l~~~~~~~~ 276 (295)
.. ..-+-.|+|++-.+.||+|+.|+| |-+.++..+..
T Consensus 249 G~--~rPGd~G~DV~HlNLHKTF~iPHGGGGPG~GPvgVk~~L~p 291 (496)
T COG1003 249 GL--ARPGDMGFDVVHLNLHKTFCIPHGGGGPGAGPVGVKAHLAP 291 (496)
T ss_pred cc--ccccccccceEEeecccccccCCCCCCCCCCceehHhhccc
Confidence 32 111223699999999999976654 45666655444
No 243
>PRK07908 hypothetical protein; Provisional
Probab=99.63 E-value=1.1e-14 Score=131.65 Aligned_cols=195 Identities=15% Similarity=0.115 Sum_probs=127.1
Q ss_pred HcCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH
Q 022564 46 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP 123 (295)
Q Consensus 46 ~~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~ 123 (295)
.+.++|+.++|+ +|+.+++++.+.+.+.. .|+ ...+..+++ +.++++++++++ +|++|+|++
T Consensus 22 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~Y~------~~~g~~~lr----~aia~~~~~~~~----~I~it~Ga~ 85 (349)
T PRK07908 22 PGLLDFAVNVRHDTPPEWLRERLAARLGDLA--AYP------STEDERRAR----AAVAARHGRTPD----EVLLLAGAA 85 (349)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHhhHhh--cCC------CccchHHHH----HHHHHHhCcChh----hEEECCCHH
Confidence 357889888874 68889999988765421 232 223444444 777778899886 899999999
Q ss_pred -HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEc
Q 022564 124 -SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 202 (295)
Q Consensus 124 -a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~ 202 (295)
++..++. +++| .+++..|.|..+ ...+...|.++..+ +++ +++.+|++.+ ++ ++++++++
T Consensus 86 ~al~~~~~--l~~~-~viv~~P~y~~~--------~~~~~~~G~~i~~v--~~~-~~~~~d~~~l----~~-~~~~i~l~ 146 (349)
T PRK07908 86 EGFALLAR--LRPR-RAAVVHPSFTEP--------EAALRAAGIPVHRV--VLD-PPFRLDPAAV----PD-DADLVVIG 146 (349)
T ss_pred HHHHHHHh--cCCC-eEEEeCCCChHH--------HHHHHHcCCEEEee--ccC-cccCcChhHh----cc-CCCEEEEc
Confidence 7765555 6775 466666433333 22344566555444 455 3478888855 34 78999998
Q ss_pred CCCCC--CccCHHHHHHHHHHcCCEEEEEccccccccccCCCCC-CCC-cceEEEeCCCCCCC--CCceEEEEEeCCchh
Q 022564 203 ASAYA--RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPS-PFE-YADVVTTTTHKSLR--GPRGAMIFFRKGVKE 276 (295)
Q Consensus 203 ~~n~~--~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~-~~~-~~D~~~~s~~K~l~--gp~gG~l~~~~~~~~ 276 (295)
++||| ...+.++|.++|++ +.++|+|+++..- ........ ... ...+++.|++|.++ |.+.|+++.++++.+
T Consensus 147 np~NPTG~~~~~~~l~~l~~~-~~~iIvDe~y~~~-~~~~~~~l~~~~~~~~i~i~S~SK~~~l~GlRiG~~~~~~~~~~ 224 (349)
T PRK07908 147 NPTNPTSVLHPAEQLLALRRP-GRILVVDEAFADA-VPGEPESLAGDDLPGVLVLRSLTKTWSLAGLRVGYALGAPDVLA 224 (349)
T ss_pred CCCCCCCCCcCHHHHHHHHhc-CCEEEEECcchhh-ccCCccccccccCCCEEEEeecccccCCccceeeeeecCHHHHH
Confidence 55564 78889999999964 7889999997532 11111010 011 12366779999764 556699999877655
Q ss_pred h
Q 022564 277 I 277 (295)
Q Consensus 277 ~ 277 (295)
.
T Consensus 225 ~ 225 (349)
T PRK07908 225 R 225 (349)
T ss_pred H
Confidence 4
No 244
>PLN02397 aspartate transaminase
Probab=99.63 E-value=6.4e-15 Score=136.59 Aligned_cols=237 Identities=16% Similarity=0.100 Sum_probs=133.7
Q ss_pred chhccCcccccCHHHHHHHHHHHHHHH--cCceecCCCCC---CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHH
Q 022564 20 PKQLNAPLEVVDPEIADIIEHEKARQW--KGLELIPSENF---TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAE 94 (295)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~L~~~~~~---~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~ 94 (295)
++++++. ...++..+..+.+...... ..++|..+..+ ..|.+.+++.+....-...+ ....|+...+..+++
T Consensus 21 ~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~l~l~~g~~p~~~~~p~~~~~~~~a~~~~~~~~--~~~~Y~~~~G~~~LR 97 (423)
T PLN02397 21 SSRFEHV-EPAPPDPILGVTEAFLADPSPVKLNLGVGAYRTEEGKPVVLNVVRKAEQRLLAGS--RNKEYLPIEGLAEFN 97 (423)
T ss_pred hhHHHcC-CcCCCChHHHHHHHHhhCCCcceEecccceeeCCCCCcccchHHHHHHHHhhccC--CCCCCCCcCCCHHHH
Confidence 5566554 4444444444444332222 34555554321 23344444444422110001 112366777888999
Q ss_pred HHHHHHHHHHcCCC-CCCcc--eeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEE
Q 022564 95 SLCQKRALEAFRLD-PEKWG--VNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETM 171 (295)
Q Consensus 95 ~~~~~~la~~~g~~-~~~~~--~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v 171 (295)
+++.+++.+..+.. .+++. +++..++|+..+...+.+++.|||+|++++|.|+.+ ...+...|+++..+
T Consensus 98 ~aia~~~~~~~~~~~~~~~i~~~~i~~g~Ga~~l~~~~~~~~~pGd~Vlv~~P~y~~y--------~~~~~~~g~~~~~v 169 (423)
T PLN02397 98 KLSAKLAYGADSPAIKENRVATVQCLSGTGSLRLGAEFLARFYPGSTIYIPNPTWGNH--------HNIFRDAGVPVRTY 169 (423)
T ss_pred HHHHHHHcCCCCchhhcCeeEeeecccchHHHHHHHHHHHHhCCCCEEEEeCCCchhH--------HHHHHHcCCeEEEe
Confidence 88888875543321 11100 013334444433445556667999999999555444 33455677666555
Q ss_pred eeecCCCCCCCCHHHHHHHHhh--cCCcEEEEcCCCCC-----CccCHHHHHHHHHHcCCEEEEEccccccccccCC--C
Q 022564 172 PYRLNESTGYIDYDQLEKSATL--FRPKLIVAGASAYA-----RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGV--I 242 (295)
Q Consensus 172 ~~~~~~~~~~id~e~l~~~i~~--~~tk~i~l~~~n~~-----~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~--~ 242 (295)
++. +.+++.+|++.+++.++. .++++++++++||| ....+++|+++|++||++||+|+++.. ....+. .
T Consensus 170 ~l~-~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~-l~~~~~~~~ 247 (423)
T PLN02397 170 RYY-DPKTRGLDFDGLLEDLKAAPDGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQG-FASGDLDAD 247 (423)
T ss_pred ecc-cCcCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccCC-ccCCchhhh
Confidence 431 223578999999888863 25677777766664 344577889999999999999999643 222210 0
Q ss_pred CCC---C--Cc-ceEEEeCCCCCCC--CCceEEEE
Q 022564 243 PSP---F--EY-ADVVTTTTHKSLR--GPRGAMIF 269 (295)
Q Consensus 243 ~~~---~--~~-~D~~~~s~~K~l~--gp~gG~l~ 269 (295)
..+ + .+ .-+++.|++|+++ |.+-|+++
T Consensus 248 ~~~~~~~~~~~~~vI~~~SfSK~~~~~G~RvG~~v 282 (423)
T PLN02397 248 AQSVRMFVEDGHEILVAQSYAKNMGLYGERVGALS 282 (423)
T ss_pred hHHHHHHHhcCCcEEEEEECcccCCCccccceEEE
Confidence 000 1 01 2367899999885 66669985
No 245
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.63 E-value=7.7e-15 Score=135.27 Aligned_cols=194 Identities=22% Similarity=0.210 Sum_probs=128.7
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcc-cCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcC--
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARY-YGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLK-- 134 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~-~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~-- 134 (295)
.+|++++++.+.+.. |..+..+++. ++..+.. ..+++.+++++|.+. .+++++|+.++..++..+..
T Consensus 60 ~~p~v~~a~~~~~~~-~~~~~~~s~~~~g~~~~~----~~Le~~la~~~g~~~-----~l~~~sG~~an~~ai~~l~~~~ 129 (402)
T TIGR01821 60 QHPEVLQAMHETLDK-YGAGAGGTRNISGTNIPH----VELEAELADLHGKES-----ALVFTSGYVANDATLATLAKII 129 (402)
T ss_pred CCHHHHHHHHHHHHH-cCCCCcchhhhhCCcHHH----HHHHHHHHHHhCCCe-----EEEECchHHHHHHHHHHhhCCC
Confidence 488999999998876 4333322221 2222223 345588899998643 79999998888877777754
Q ss_pred CCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhh---cCCcEEEEcCCCC--CCc
Q 022564 135 PHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL---FRPKLIVAGASAY--ARL 209 (295)
Q Consensus 135 ~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~---~~tk~i~l~~~n~--~~~ 209 (295)
+++.|+.....|.+.... +...|.....+ + ..|++++++.++. .++++|+++++++ |..
T Consensus 130 ~~~~v~~~~~~h~s~~~~--------~~~~g~~~~~~--~------~~d~~~l~~~l~~~~~~~~~~v~~e~~~~~~G~~ 193 (402)
T TIGR01821 130 PGCVIFSDELNHASMIEG--------IRHSGAEKFIF--R------HNDVAHLEKLLQSVDPNRPKIIAFESVYSMDGDI 193 (402)
T ss_pred CCCEEEEcchHhHHHHHH--------HHHcCCeEEEE--C------CCCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCc
Confidence 777777665566555332 22344322211 1 2377888887752 2578888874444 588
Q ss_pred cCHHHHHHHHHHcCCEEEEEcccccccccc---CC-CCCCC-CcceEEEeCCCCCCCCCceEEEEEeCCchhhh
Q 022564 210 YDYERIRKVCNKQKAIMLADMAHISGLVAA---GV-IPSPF-EYADVVTTTTHKSLRGPRGAMIFFRKGVKEIN 278 (295)
Q Consensus 210 ~~l~~I~~ia~~~~~~vivD~a~~~g~~~~---~~-~~~~~-~~~D~~~~s~~K~l~gp~gG~l~~~~~~~~~~ 278 (295)
.|+++|.++|++||+++++|++|+.|.... +. ...++ ...|+++.+++|.|++ .||++++++++.+..
T Consensus 194 ~~l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~-~GG~i~~~~~~~~~l 266 (402)
T TIGR01821 194 APIEEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFGV-VGGYIAASRKLIDAI 266 (402)
T ss_pred cCHHHHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEEechhhhcc-CCceeecCHHHHHHH
Confidence 899999999999999999999999775421 11 11111 1368999999999854 668888887765543
No 246
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.62 E-value=9.1e-15 Score=131.73 Aligned_cols=161 Identities=20% Similarity=0.163 Sum_probs=117.3
Q ss_pred cchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCcccccccccccccee
Q 022564 87 NEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSI 166 (295)
Q Consensus 87 ~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~ 166 (295)
++..+.++ +.++.+-|.+. .+.+.||..|+..++.+++++||+|++++..|++.+....... ...|.
T Consensus 62 nPT~~~lE----~~~a~LEg~~~-----~~afsSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~~~~l----~~~gi 128 (396)
T COG0626 62 NPTRDALE----EALAELEGGED-----AFAFSSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLFEKIL----QKFGV 128 (396)
T ss_pred CccHHHHH----HHHHHhhCCCc-----EEEecCcHHHHHHHHHHhcCCCCEEEecCCccchHHHHHHHHH----HhcCe
Confidence 44556666 77777777765 7899999999888899999999999999987777655433221 12343
Q ss_pred eeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEc-CCCCC-CccCHHHHHHHHHHcCCEEEEEccccccccccCCCCC
Q 022564 167 FFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASAYA-RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPS 244 (295)
Q Consensus 167 ~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~-~~n~~-~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~ 244 (295)
++ .. ++ .-|.+++++++.+++||+|++- ++|+. .+.|+++|+++|+++|+++++|++.+.+ +...
T Consensus 129 ~~--~~--~d----~~~~~~~~~~~~~~~tk~v~lEtPsNP~l~v~DI~~i~~~A~~~g~~vvVDNTfatP-----~~q~ 195 (396)
T COG0626 129 EV--TF--VD----PGDDEALEAAIKEPNTKLVFLETPSNPLLEVPDIPAIARLAKAYGALVVVDNTFATP-----VLQR 195 (396)
T ss_pred EE--EE--EC----CCChHHHHHHhcccCceEEEEeCCCCcccccccHHHHHHHHHhcCCEEEEECCcccc-----cccC
Confidence 33 32 22 1245566666763489999996 55553 8899999999999999999999994433 3334
Q ss_pred CCC-cceEEEeCCCCCCCCCce---EEEEEeCC
Q 022564 245 PFE-YADVVTTTTHKSLRGPRG---AMIFFRKG 273 (295)
Q Consensus 245 ~~~-~~D~~~~s~~K~l~gp~g---G~l~~~~~ 273 (295)
|+. |+|+++.|..|+++|..- |++.++++
T Consensus 196 PL~~GaDIVvhSaTKyl~GHsDvl~G~v~~~~~ 228 (396)
T COG0626 196 PLELGADIVVHSATKYLGGHSDVLGGVVLTPNE 228 (396)
T ss_pred hhhcCCCEEEEeccccccCCcceeeeEEecChH
Confidence 555 699999999999988654 76665654
No 247
>PRK08354 putative aminotransferase; Provisional
Probab=99.62 E-value=1.9e-14 Score=128.17 Aligned_cols=179 Identities=12% Similarity=0.075 Sum_probs=119.5
Q ss_pred cCceecCCCCC-CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-H
Q 022564 47 KGLELIPSENF-TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-S 124 (295)
Q Consensus 47 ~~i~L~~~~~~-~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a 124 (295)
+.|+|+.++|+ +|+.+.+++.+.+.. . .+||. ... +++++++++| + +|++|+|++ +
T Consensus 9 ~~i~l~~~~np~~p~~~~~a~~~~~~~-~-~~yp~---------~~~----l~~~ia~~~~---~----~I~vt~G~~~a 66 (311)
T PRK08354 9 GLIDFSASVNPYPPEWLDEMFERAKEI-S-GRYTY---------YEW----LEEEFSKLFG---E----PIVITAGITEA 66 (311)
T ss_pred ceeEecCCCCCCCCHHHHHHHHHHHHH-h-hcCCC---------hHH----HHHHHHHHHC---C----CEEECCCHHHH
Confidence 46888888775 477888888776543 1 12331 122 4578888887 2 799999999 7
Q ss_pred HHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCC
Q 022564 125 NFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGAS 204 (295)
Q Consensus 125 ~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~ 204 (295)
+..++ .++.+||+|++++|.|+.+ ...+...|.++ ++ ..+|++.+++.++ +++++++++|
T Consensus 67 l~~~~-~~~~~gd~vlv~~P~y~~~--------~~~~~~~g~~~--~~-------~~~d~~~l~~~~~--~~~~vi~~~P 126 (311)
T PRK08354 67 LYLIG-ILALRDRKVIIPRHTYGEY--------ERVARFFAARI--IK-------GPNDPEKLEELVE--RNSVVFFCNP 126 (311)
T ss_pred HHHHH-HhhCCCCeEEEeCCCcHHH--------HHHHHHcCCEE--ee-------cCCCHHHHHHhhc--CCCEEEEecC
Confidence 66444 4555999999999555554 33444566443 32 2368899988875 5678888766
Q ss_pred CCC--C---ccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCC--CCceEEEEE
Q 022564 205 AYA--R---LYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLR--GPRGAMIFF 270 (295)
Q Consensus 205 n~~--~---~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~--gp~gG~l~~ 270 (295)
||| . ...+++|.++|+++|+++|+|+++...... +. ... ...-+++.|++|+|+ |.+-|++++
T Consensus 127 ~NPTG~~~~~~~l~~l~~~a~~~~~~li~De~y~~f~~~-~~-~~~-~~~vi~~~S~SK~~~l~GlRiG~~v~ 196 (311)
T PRK08354 127 NNPDGKFYNFKELKPLLDAVEDRNALLILDEAFIDFVKK-PE-SPE-GENIIKLRTFTKSYGLPGIRVGYVKG 196 (311)
T ss_pred CCCCCCccCHHHHHHHHHHhhhcCcEEEEeCcchhcccc-cc-ccC-CCcEEEEeccHhhcCCccceeeeeee
Confidence 664 3 345677888899999999999996432221 11 111 124588999999885 445598887
No 248
>PRK07049 methionine gamma-lyase; Validated
Probab=99.62 E-value=1e-14 Score=135.05 Aligned_cols=159 Identities=18% Similarity=0.191 Sum_probs=112.0
Q ss_pred HHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecC
Q 022564 97 CQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 176 (295)
Q Consensus 97 ~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 176 (295)
+++.++++.|.+. .+++++|+.++.+++.+++++||+|+++.+.|+++...... .....|.++ +.+. +
T Consensus 88 Le~~lA~leg~~~-----~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~~----~l~~~Gi~~--v~~~-~ 155 (427)
T PRK07049 88 VEDRLAVYEGAES-----AALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLLAK----TFRNFGVGA--VGFA-D 155 (427)
T ss_pred HHHHHHHHhCCCc-----EEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHH----HHHhcCcEE--EEEe-C
Confidence 4488888888663 67888888888878999999999999999777666332110 011234332 3322 1
Q ss_pred CCCCCCCHHHHHHHHh----hcCCcEEEEcCCCCC--CccCHHHHHHHHHH------cCCEEEEEccccccccccCCCCC
Q 022564 177 ESTGYIDYDQLEKSAT----LFRPKLIVAGASAYA--RLYDYERIRKVCNK------QKAIMLADMAHISGLVAAGVIPS 244 (295)
Q Consensus 177 ~~~~~id~e~l~~~i~----~~~tk~i~l~~~n~~--~~~~l~~I~~ia~~------~~~~vivD~a~~~g~~~~~~~~~ 244 (295)
..|++++++.+. ..++|+|++++++|| ...++++|.++|++ +++++++|++...... ..
T Consensus 156 ----~~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~~~~-----~~ 226 (427)
T PRK07049 156 ----GLSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLGPVF-----QK 226 (427)
T ss_pred ----CCCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCcccccc-----CC
Confidence 257788887774 237899999866664 78899999999988 8999999999543221 11
Q ss_pred CCC-cceEEEeCCCCCCCCC---ceEEEEEeCCchh
Q 022564 245 PFE-YADVVTTTTHKSLRGP---RGAMIFFRKGVKE 276 (295)
Q Consensus 245 ~~~-~~D~~~~s~~K~l~gp---~gG~l~~~~~~~~ 276 (295)
++. ++|+++.|++|+++|. ++|+++.++++.+
T Consensus 227 pl~~g~divv~S~SK~~gG~~glr~G~vv~~~~l~~ 262 (427)
T PRK07049 227 PLEHGADLSVYSLTKYVGGHSDLVAGAVLGRKALIR 262 (427)
T ss_pred ccccCCCEEEEcCceeecCCCCcEEEEEECCHHHHH
Confidence 223 5899999999999864 4599988776544
No 249
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.61 E-value=2.5e-14 Score=131.95 Aligned_cols=196 Identities=18% Similarity=0.196 Sum_probs=136.7
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCc-chHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhc---
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGN-EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALL--- 133 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~-~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~--- 133 (295)
..|+++++..+.+.. |..|..+++...++ ....++| +.+++++|.+. .+++.+|..||+.++.++.
T Consensus 117 ~~p~v~~a~~~ai~~-yG~g~~gSrl~~G~~~~h~~LE----~~LA~f~g~e~-----all~sSGy~AN~~~i~aL~~~~ 186 (476)
T PLN02955 117 SHPTISNAAANAAKE-YGMGPKGSALICGYTTYHRLLE----SSLADLKKKED-----CLVCPTGFAANMAAMVAIGSVA 186 (476)
T ss_pred CCHHHHHHHHHHHHH-cCCCCCCcCccccChHHHHHHH----HHHHHHHCCCc-----EEEECChHHHHHHHHHHHhhcc
Confidence 378999999998876 65555555444433 3334444 88999999886 7999999999998888762
Q ss_pred -----------CCCCeEEEecCCCCcccCcccccccccccccee--eeEEEeeecCCCCCCCCHHHHHHHHhhc--CCcE
Q 022564 134 -----------KPHDRIMALDLPHGGHLSHGYQTDTKKISAVSI--FFETMPYRLNESTGYIDYDQLEKSATLF--RPKL 198 (295)
Q Consensus 134 -----------~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~--~~~~v~~~~~~~~~~id~e~l~~~i~~~--~tk~ 198 (295)
.++|.|+.....|.+... ++++... ....+.++. -|+++|+++++.. +.++
T Consensus 187 ~~~~~~~~~~~~~~d~i~~D~~~HaSI~d--------G~~ls~~~~~a~~~~f~H------ND~~~Le~~L~~~~~~~~~ 252 (476)
T PLN02955 187 SLLAASGKPLKNEKVAIFSDALNHASIID--------GVRLAERQGNVEVFVYRH------CDMYHLNSLLSSCKMKRKV 252 (476)
T ss_pred ccccccccccCCCCcEEEEeccchHHHHH--------HHHhccccCCceEEEeCC------CCHHHHHHHHHhCCCCceE
Confidence 456677777766666543 3333311 122233332 3899999988642 2345
Q ss_pred EEEc--CCCCCCccCHHHHHHHHHHcCCEEEEEccccccccccC---C-CCCCC-CcceEEEeCCCCCCCCCceEEEEEe
Q 022564 199 IVAG--ASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAG---V-IPSPF-EYADVVTTTTHKSLRGPRGAMIFFR 271 (295)
Q Consensus 199 i~l~--~~n~~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~---~-~~~~~-~~~D~~~~s~~K~l~gp~gG~l~~~ 271 (295)
|++. ++..|...|+++|.++|++||+++++|+||+.|.+... . ...++ ...|++++++.|.| |-.||+++++
T Consensus 253 Vv~EgV~SmdGdiapL~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~~di~ii~~TLsKA~-G~~GGfi~gs 331 (476)
T PLN02955 253 VVTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCEADVDLCVGTLSKAA-GCHGGFIACS 331 (476)
T ss_pred EEEeCCCCCCCCcCCHHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhCCCCCCcEEEEeCccch-hccCceeecH
Confidence 5553 56668899999999999999999999999998877541 1 11111 24889999999987 5679999999
Q ss_pred CCchhhh
Q 022564 272 KGVKEIN 278 (295)
Q Consensus 272 ~~~~~~~ 278 (295)
+++.+..
T Consensus 332 ~~~~~~l 338 (476)
T PLN02955 332 KKWKQLI 338 (476)
T ss_pred HHHHHHH
Confidence 8766654
No 250
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.61 E-value=9.6e-15 Score=132.89 Aligned_cols=168 Identities=14% Similarity=0.034 Sum_probs=114.7
Q ss_pred HHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhhcCCC-CeEEEecCCCCcccCccccccccccccceeeeEEEeee
Q 022564 97 CQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPH-DRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYR 174 (295)
Q Consensus 97 ~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al~~~g-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 174 (295)
+|+.+++++|++++ +|++|+|++ ++..++.+++.+| |.|++++|.|+ .+...+...|.++..+++.
T Consensus 64 lr~~ia~~~~~~~~----~I~~t~G~~~~l~~~~~~~~~~g~~~vlv~~p~y~--------~~~~~~~~~g~~~~~v~~~ 131 (364)
T PRK04781 64 LRSALAALYGCAPE----QLLIGRGSDEAIDLLVRALCVPGRDAVLVTPPVFG--------MYAVCARLQNAPLVEVPLV 131 (364)
T ss_pred HHHHHHHHhCcChH----HEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChH--------HHHHHHHHcCCEEEEEecC
Confidence 55778888899886 899999999 7777888889999 78999885433 3332334556555555532
Q ss_pred cCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccCHHHHHHHHHH--cCCEEEEEccccccccccCCCCCCC-C--
Q 022564 175 LNESTGYIDYDQLEKSATLFRPKLIVAGASAYA--RLYDYERIRKVCNK--QKAIMLADMAHISGLVAAGVIPSPF-E-- 247 (295)
Q Consensus 175 ~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~~--~~~~l~~I~~ia~~--~~~~vivD~a~~~g~~~~~~~~~~~-~-- 247 (295)
.+.+++.+|++++++.+...++++|+++++||| ...+.+++.++++. ++++||+|+++..-. . ......+ .
T Consensus 132 ~~~~~~~~d~~~l~~~~~~~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI~Deay~~f~-~-~~~~~~~~~~~ 209 (364)
T PRK04781 132 DGADGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIALDQIERALQALQGKALVVVDEAYGEFS-D-VPSAVGLLARY 209 (364)
T ss_pred CCccCCCcCHHHHHHHHhccCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCcchhhc-C-CcchHHHHhhC
Confidence 122245789999876654348999999866664 77788888777764 478999999965322 1 1000000 1
Q ss_pred cceEEEeCCCCCCC--CCceEEEEEeCCchhhh
Q 022564 248 YADVVTTTTHKSLR--GPRGAMIFFRKGVKEIN 278 (295)
Q Consensus 248 ~~D~~~~s~~K~l~--gp~gG~l~~~~~~~~~~ 278 (295)
..-+++.|++|.|+ |.+-|+++.++++.+..
T Consensus 210 ~~vi~~~SfSK~~gl~GlRvGy~v~~~~l~~~l 242 (364)
T PRK04781 210 DNLAVLRTLSKAHALAAARIGSLIANAELIAVL 242 (364)
T ss_pred CCEEEEecChhhcccccceeeeeeCCHHHHHHH
Confidence 12378999999875 55669999988876543
No 251
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.61 E-value=5.9e-15 Score=128.78 Aligned_cols=177 Identities=19% Similarity=0.262 Sum_probs=108.9
Q ss_pred HHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccc---cccccccceeeeE
Q 022564 93 AESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQT---DTKKISAVSIFFE 169 (295)
Q Consensus 93 l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~---~~~~~~~~g~~~~ 169 (295)
=++.+.+.+++.||++..- |...+.||+.|+..++.++++|||+.+...-.-...+.-.... ..-...-.|..++
T Consensus 55 GRd~le~iyA~vfgaE~AL--VRpq~vSGTHAi~~~Lfg~LrpGD~ll~~tG~PYDTL~~VIG~~g~~~GSL~e~Gi~Y~ 132 (403)
T PF06838_consen 55 GRDKLERIYADVFGAEDAL--VRPQFVSGTHAIALALFGVLRPGDELLSITGKPYDTLEEVIGIRGNGPGSLKEFGIKYR 132 (403)
T ss_dssp HHHHHHHHHHHHCT-SEEE--EETTS-SHHHHHHHHHHHH--TT-EEEESSSS--CCHHHHHTSSSSSSSSTGGGT-EEE
T ss_pred cHHHHHHHHHHHhCchhhh--hcccccchHHHHHHHHHhcCCCCCeEEEcCCCchhhHHHHhCCCCCCCCChHHhCceeE
Confidence 3444558999999997642 4556789999888899999999999997652111111000000 0001223455566
Q ss_pred EEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEc-CCCC---C--CccCHHHHHHHHHHc--CCEEEEEccccccccccCC
Q 022564 170 TMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASAY---A--RLYDYERIRKVCNKQ--KAIMLADMAHISGLVAAGV 241 (295)
Q Consensus 170 ~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~-~~n~---~--~~~~l~~I~~ia~~~--~~~vivD~a~~~g~~~~~~ 241 (295)
.++ +. +++.+|++.+++++++ +||++++. +..| + ++.+++++.+++|+. +++++||++++ -+....
T Consensus 133 ~v~--L~-~dg~~D~~~i~~~~~~-~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYG--EFvE~~ 206 (403)
T PF06838_consen 133 EVP--LT-EDGTIDWEAIKKALKP-NTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYG--EFVETQ 206 (403)
T ss_dssp E----B--TTSSB-HHHHHHHHHT-TEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTT--TTTSSS
T ss_pred EEe--ec-CCCCcCHHHHHHhhcc-CceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcc--eecccc
Confidence 665 44 5689999999999996 99999995 3334 2 566677777777765 79999999953 333223
Q ss_pred CCCCCCcceEEEeCCCCCCCC---CceEEEEEeCCchhhh
Q 022564 242 IPSPFEYADVVTTTTHKSLRG---PRGAMIFFRKGVKEIN 278 (295)
Q Consensus 242 ~~~~~~~~D~~~~s~~K~l~g---p~gG~l~~~~~~~~~~ 278 (295)
++.. .|+|++.+|.-|+.+| |.||++++|+++.+..
T Consensus 207 EP~~-vGADl~aGSLIKNpGGgiAptGGYIaGr~~lVe~~ 245 (403)
T PF06838_consen 207 EPTE-VGADLMAGSLIKNPGGGIAPTGGYIAGRKDLVERA 245 (403)
T ss_dssp -GGG-GT-SEEEEETTSGGGTTT-SS-EEEEESHHHHHHH
T ss_pred Cccc-cchhheeccceeCCCCCccCcCCEEechHHHHHHH
Confidence 3211 2799999999999975 8899999999976643
No 252
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.61 E-value=2.1e-14 Score=132.61 Aligned_cols=195 Identities=18% Similarity=0.189 Sum_probs=130.8
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcC--C
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLK--P 135 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~--~ 135 (295)
..|++++++.+.+.. +..+..+++...+. ......+++.+++++|.+. .++++||++++..++.++.. +
T Consensus 60 ~~p~v~~a~~~~~~~-~~~~~~~s~~~~~~---~~~~~~le~~la~~~g~~~-----~~~~~SG~~An~~ai~~l~~~~~ 130 (406)
T PRK13393 60 QHPAVLAAMHEALDT-CGAGAGGTRNISGT---NHYHVLLEAELADLHGKEA-----ALLFTSGYVSNWAALSTLGSRLP 130 (406)
T ss_pred CCHHHHHHHHHHHHH-cCCCCcccccccCC---hHHHHHHHHHHHHHhCCCc-----EEEeCCcHHHHHHHHHHhhcCCC
Confidence 378999999998876 43232222211111 1233445688999998753 79999999988877777755 7
Q ss_pred CCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhh---cCCcEEEEcCCCC--CCcc
Q 022564 136 HDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL---FRPKLIVAGASAY--ARLY 210 (295)
Q Consensus 136 gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~---~~tk~i~l~~~n~--~~~~ 210 (295)
||.|+.....|++...... ..|.+...++ ..|++++++.++. .++++|++++.++ |...
T Consensus 131 g~~I~~~~~~H~s~~~~~~--------~~g~~~~~~~--------~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~~G~~~ 194 (406)
T PRK13393 131 GCVILSDELNHASMIEGIR--------HSRAEKRIFR--------HNDPADLERKLSDLDPHRPKLVAFESVYSMDGDIA 194 (406)
T ss_pred CCEEEEccchhHHHHHHHH--------HcCCeEEEeC--------CCCHHHHHHHHHhccCCCCEEEEEcCCCCCCCchh
Confidence 8888777778877654332 3343332222 1367778777752 2577888864333 6889
Q ss_pred CHHHHHHHHHHcCCEEEEEcccccccccc-C--C-CCCCCC-cceEEEeCCCCCCCCCceEEEEEeCCchhhh
Q 022564 211 DYERIRKVCNKQKAIMLADMAHISGLVAA-G--V-IPSPFE-YADVVTTTTHKSLRGPRGAMIFFRKGVKEIN 278 (295)
Q Consensus 211 ~l~~I~~ia~~~~~~vivD~a~~~g~~~~-~--~-~~~~~~-~~D~~~~s~~K~l~gp~gG~l~~~~~~~~~~ 278 (295)
|+++|.++|++||+++++|++|+.|.+.. + . ...++. ..|+++.++.|.++. .||++++++++.+..
T Consensus 195 ~l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~tlsKa~g~-~GG~~~~~~~~~~~l 266 (406)
T PRK13393 195 PIAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGTLAKAFGV-MGGYITGSAALCDFI 266 (406)
T ss_pred CHHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCCCCCeEEEEeCchhhcc-cCceeeCCHHHHHHH
Confidence 99999999999999999999999776431 1 1 111111 368899999999864 568888887765543
No 253
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.61 E-value=1.9e-14 Score=130.78 Aligned_cols=199 Identities=14% Similarity=0.114 Sum_probs=131.2
Q ss_pred cCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-
Q 022564 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP- 123 (295)
Q Consensus 47 ~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~- 123 (295)
+.++|+.++|+ +++.+.+++.+.+... .+|+. .. ..+ +++.++++++++++ +|++|+|++
T Consensus 23 ~~i~l~~~~n~~~~~~~~~~a~~~~~~~~--~~Y~~------~~-~~~----Lr~aia~~~~v~~~----~I~it~G~~~ 85 (360)
T PRK07392 23 AILDFSASINPLGPPESVIAAIQSALSAL--RHYPD------PD-YRE----LRLALAQHHQLPPE----WILPGNGAAE 85 (360)
T ss_pred cEEEeCCcCCCCCCCHHHHHHHHHHHHHh--hcCCC------cC-HHH----HHHHHHHHhCcChh----hEEECCCHHH
Confidence 45889888774 6888999988766531 12322 11 233 44677777799887 899999999
Q ss_pred HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCC----CCCHHHHHHHHhhcCCcEE
Q 022564 124 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTG----YIDYDQLEKSATLFRPKLI 199 (295)
Q Consensus 124 a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~----~id~e~l~~~i~~~~tk~i 199 (295)
++..++.++ .+||.|++++|.|+.+ ...+...|.++..++ .+.++. ..|++++++.. . +++++
T Consensus 86 ~i~~~~~~l-~~g~~vlv~~P~y~~~--------~~~~~~~g~~~~~v~--~~~~~~~~~~~~~~~~~~~~~-~-~~~~~ 152 (360)
T PRK07392 86 LLTWAGREL-AQLRAVYLITPAFGDY--------RRALRAFGATVKELP--LPLDQPSPGLTLRLQTLPPQL-T-PNDGL 152 (360)
T ss_pred HHHHHHHHh-CCCCeEEEECCCcHHH--------HHHHHHcCCeEEEEe--cccccCCcccccCHHHHHHhc-c-CCCEE
Confidence 777666665 4789999999544444 434556676665555 442222 35677776554 3 68899
Q ss_pred EEcCCCCC--CccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCC---C--cceEEEeCCCCCCC--CCceEEEEE
Q 022564 200 VAGASAYA--RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPF---E--YADVVTTTTHKSLR--GPRGAMIFF 270 (295)
Q Consensus 200 ~l~~~n~~--~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~---~--~~D~~~~s~~K~l~--gp~gG~l~~ 270 (295)
+++++||| ...+.++|.++|+++++ +|+|+++..- ...+.....+ . ..-+++.|++|.|+ |.+-|++++
T Consensus 153 ~l~nP~NPTG~~~~~~~l~~l~~~~~~-~IiDE~y~~~-~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~ 230 (360)
T PRK07392 153 LLNNPHNPTGKLWSREAILPLLEQFAL-VVVDEAFMDF-LPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIA 230 (360)
T ss_pred EEeCCCCCCCCCcCHHHHHHHHHHCCE-EEEECchhhh-ccCccccchHHHhhcCCCEEEEEechhhhcCCchheeeeeC
Confidence 99866664 77889999999999985 6669996532 2211111100 1 12378899999874 555599999
Q ss_pred eCCchhh
Q 022564 271 RKGVKEI 277 (295)
Q Consensus 271 ~~~~~~~ 277 (295)
++++.+.
T Consensus 231 ~~~~~~~ 237 (360)
T PRK07392 231 HPDRLQR 237 (360)
T ss_pred CHHHHHH
Confidence 8776543
No 254
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.60 E-value=7.9e-15 Score=133.51 Aligned_cols=158 Identities=17% Similarity=0.204 Sum_probs=109.1
Q ss_pred CcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccce
Q 022564 86 GNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVS 165 (295)
Q Consensus 86 ~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g 165 (295)
+++..+++| +.++++.|.+. .+.+.||+.|+.+++.+++++||+|+++...|++.+.... ..+...|
T Consensus 62 ~~P~~~~lE----~~la~leg~~~-----av~~sSG~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~~----~~~~~~G 128 (384)
T PRK06434 62 GNPTVQAFE----EKYAVLENAEH-----ALSFSSGMGAITSAILSLIKKGKRILSISDLYGQTFYFFN----KVLKTLG 128 (384)
T ss_pred CChhHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHH----HHHHhcC
Confidence 445566666 77888889876 7899999998887889999999999998876666543221 1222345
Q ss_pred eeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEc-CCCCC-CccCHHHHHHHHHHcCCEEEEEccccccccccCCCC
Q 022564 166 IFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASAYA-RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIP 243 (295)
Q Consensus 166 ~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~-~~n~~-~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~ 243 (295)
.++..+ +.++ .+.++ +++.++++|++. .+|+. ...|+++|.++|++++ +++|++++.+...
T Consensus 129 i~v~fv--d~~~------~~~~~--l~~~~tklv~~e~~snpt~~v~Di~~I~~la~~~~--lvVD~t~~s~~~~----- 191 (384)
T PRK06434 129 IHVDYI--DTDR------LNSLD--FDPSNYDLIYAESITNPTLKVPDIKNVSSFCHEND--VIVDATFASPYNQ----- 191 (384)
T ss_pred cEEEEE--CCCC------hhhee--ecCCCeeEEEEEcCCCCCceeecHHHHHHHHHHcC--eEEECCCCCcccC-----
Confidence 444333 3331 11121 223378999986 45543 7899999999999998 4669997544321
Q ss_pred CCCC-cceEEEeCCCCCCCCCc---eEEEEEeCC
Q 022564 244 SPFE-YADVVTTTTHKSLRGPR---GAMIFFRKG 273 (295)
Q Consensus 244 ~~~~-~~D~~~~s~~K~l~gp~---gG~l~~~~~ 273 (295)
.++. ++|++++|+||+++|+. ||+++++++
T Consensus 192 ~pl~~gaDivv~S~tK~i~G~~d~~gG~vv~~~~ 225 (384)
T PRK06434 192 NPLDLGADVVIHSATKYISGHSDVVMGVAGTNNK 225 (384)
T ss_pred CchhcCCCEEEeecccccCCCCCceEEEEecCcH
Confidence 1222 59999999999999876 587877654
No 255
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.59 E-value=2.6e-14 Score=124.67 Aligned_cols=201 Identities=19% Similarity=0.256 Sum_probs=134.3
Q ss_pred CCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHh
Q 022564 54 SENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTA 131 (295)
Q Consensus 54 ~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~a 131 (295)
+++. +.|+++++|.+.-.. +..-||..+....++ +++++++|... -+++++|+.+|..++.+
T Consensus 6 SDn~~g~~~~m~eam~~a~~~-------~~~~YG~D~~~~~~e----~~~ae~~g~~a-----~~Fv~sGT~aN~lal~~ 69 (342)
T COG2008 6 SDNVAGPTPEMREALAAANAV-------GDDVYGEDPTTNALE----QRIAELFGKEA-----ALFVPSGTQANQLALAA 69 (342)
T ss_pred cCccCCCCHHHHHHHHhcccc-------CCCCCCCCHHHHHHH----HHHHHHhCCce-----EEEecCccHHHHHHHHH
Confidence 4443 588999999875421 122256655555555 88889999832 56667777799989999
Q ss_pred hcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhc------CCcEEEEcCCC
Q 022564 132 LLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF------RPKLIVAGASA 205 (295)
Q Consensus 132 l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~------~tk~i~l~~~n 205 (295)
.++||+.|++....|--..... ++.+.+... .++. .+.+++.+++|+++..+... ++.+++++.++
T Consensus 70 ~~~~~~~vi~~~~aHi~~~E~G------a~~~~~~~~-~~~~-~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~t 141 (342)
T COG2008 70 HCQPGESVICHETAHIYTDECG------APEFFGGGQ-KLPI-VPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTAT 141 (342)
T ss_pred hcCCCCeEEEeccccceecccC------cHHHHcCCc-eecc-CCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccC
Confidence 9999999998875554332221 222332111 1221 22267899999999988631 34455556444
Q ss_pred C-CC---ccCHHHHHHHHHHcCCEEEEEccccccccc-cCCCCCCCC-cceEEEeCCCCCCCCCceEEEEEeCCchhhh
Q 022564 206 Y-AR---LYDYERIRKVCNKQKAIMLADMAHISGLVA-AGVIPSPFE-YADVVTTTTHKSLRGPRGAMIFFRKGVKEIN 278 (295)
Q Consensus 206 ~-~~---~~~l~~I~~ia~~~~~~vivD~a~~~g~~~-~~~~~~~~~-~~D~~~~s~~K~l~gp~gG~l~~~~~~~~~~ 278 (295)
. |+ ...+++|.++||+||+.++.|+|....... .+.....+. ++|+++++++|.++.|.|++++++.++....
T Consensus 142 e~GtVy~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg~~~~~~~~~~D~v~~~~tK~g~~~~gAiv~gn~~~~~~a 220 (342)
T COG2008 142 EGGTVYPLDELEAISAVCKEHGLPLHMDGARLANALVALGVALKTIKSYVDSVSFCLTKGGGAPVGAIVFGNRDFAKRA 220 (342)
T ss_pred CCceecCHHHHHHHHHHHHHhCCceeechHHHHHHHHHcCCCHHHHHhhCCEEEEecccCCcceeeeEEEcCHHHHHHH
Confidence 3 54 445667788899999999999996654433 232211122 6999999999999999999999999876543
No 256
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.59 E-value=5.3e-14 Score=125.03 Aligned_cols=201 Identities=13% Similarity=0.103 Sum_probs=127.3
Q ss_pred CCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcch-HHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHh
Q 022564 53 PSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEY-IDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTA 131 (295)
Q Consensus 53 ~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~-~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~a 131 (295)
-|.++.++++++++...+....... ++-.... ...+. .+.+.++...|+.. ..++.+.+.|...++.+
T Consensus 34 lG~s~~~~e~iea~~~~~~~~v~Le-----~~l~~g~~~~R~~-~~~~~~~~~~~aea-----~~ivnnn~aAVll~~~a 102 (395)
T COG1921 34 LGRSLYSPEAIEAMKEAMRAPVELE-----TDLKTGKRGARLT-ELAELLCGLTGAEA-----AAIVNNNAAAVLLTLNA 102 (395)
T ss_pred CCCccCCHHHHHHHHHHhcccceee-----eecccchhhHHHH-HHHHHHhcccchhh-----eeeECCcHHHHHHHHhh
Confidence 4677889999999998876522111 1111111 12222 23344444444332 34444444477756666
Q ss_pred hcCCCCeEEEec-CCC-CcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEE-cCCCCC-
Q 022564 132 LLKPHDRIMALD-LPH-GGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASAYA- 207 (295)
Q Consensus 132 l~~~gd~Vl~~~-~~~-~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l-~~~n~~- 207 (295)
+.. +.+|++.. +.- ++++.. ...+...|.++ +.+. ....-+..+++.+|.+ +|++++- ..+|++
T Consensus 103 l~~-~~EvVis~g~lV~gg~~~v-----~d~~~~aG~~l--~EvG---~tn~t~~~d~~~AIne-~ta~llkV~s~~~~f 170 (395)
T COG1921 103 LAE-GKEVVVSRGELVEGGAFRV-----PDIIRLAGAKL--VEVG---TTNRTHLKDYELAINE-NTALLLKVHSSNYGF 170 (395)
T ss_pred hcc-CCeEEEEccccccCCCCCh-----hHHHHHcCCEE--EEec---ccCcCCHHHHHHHhcc-CCeeEEEEeeccccc
Confidence 666 44555443 222 233222 23556777555 4433 3456789999999988 8887764 477776
Q ss_pred -CccCHHHHHHHHHHcCCEEEEEcccccccc---ccCCCCCCCCcceEEEeCCCCCCCCCceEEEEEeCCchhhh
Q 022564 208 -RLYDYERIRKVCNKQKAIMLADMAHISGLV---AAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEIN 278 (295)
Q Consensus 208 -~~~~l~~I~~ia~~~~~~vivD~a~~~g~~---~~~~~~~~~~~~D~~~~s~~K~l~gp~gG~l~~~~~~~~~~ 278 (295)
...++++++++||++|+++++|.+. |.. -.++....-.|+|++++|++|.|+||++|++++|+++.+-.
T Consensus 171 ~~~l~~~~l~~ia~~~~lpvivD~aS--g~~v~~e~~l~~~la~GaDLV~~SgdKllgGPqaGii~GkKelI~~l 243 (395)
T COG1921 171 TGMLSEEELVEIAHEKGLPVIVDLAS--GALVDKEPDLREALALGADLVSFSGDKLLGGPQAGIIVGKKELIEKL 243 (395)
T ss_pred cccccHHHHHHHHHHcCCCEEEecCC--ccccccccchhHHHhcCCCEEEEecchhcCCCccceEechHHHHHHH
Confidence 5677889999999999999999984 332 11222222237999999999999999999999999987543
No 257
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.58 E-value=1.6e-14 Score=129.77 Aligned_cols=155 Identities=15% Similarity=0.117 Sum_probs=105.6
Q ss_pred HHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeec
Q 022564 97 CQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL 175 (295)
Q Consensus 97 ~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 175 (295)
+|+++++++|++++ +|++|+|++ ++.+ +..++.+| .|++.+|.|.++.. .....|.++ ++++
T Consensus 52 lr~~la~~~~~~~~----~i~~t~G~~~~i~~-~~~~l~~g-~vl~~~p~y~~~~~--------~~~~~g~~~--~~~~- 114 (330)
T TIGR01140 52 LRAAAAAYYGLPAA----SVLPVNGAQEAIYL-LPRLLAPG-RVLVLAPTYSEYAR--------AWRAAGHEV--VELP- 114 (330)
T ss_pred HHHHHHHHhCCChh----hEEECCCHHHHHHH-HHHHhCCC-eEEEeCCCcHHHHH--------HHHHcCCEE--EEeC-
Confidence 55888888898876 899999999 6664 44556788 69998876665533 223455433 3322
Q ss_pred CCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccC---HHHHHHHHHHcCCEEEEEccccccccccCCCCC-CCCcc
Q 022564 176 NESTGYIDYDQLEKSATLFRPKLIVAGASAYA--RLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPS-PFEYA 249 (295)
Q Consensus 176 ~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~~--~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~-~~~~~ 249 (295)
|++++++.++ ++++++++.++|| ...+ +++|+++|+++|++||+|+++............ .....
T Consensus 115 -------d~~~l~~~~~--~~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~ 185 (330)
T TIGR01140 115 -------DLDRLPAALE--ELDVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFTPDASLAPQAARFPG 185 (330)
T ss_pred -------CHHHHHhhcc--cCCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECcccccCCccchhhHhccCCC
Confidence 7899999884 6788888755553 5666 667788899999999999997533221111110 00135
Q ss_pred eEEEeCCCCCCCCCc--eEEEEEeCCchhh
Q 022564 250 DVVTTTTHKSLRGPR--GAMIFFRKGVKEI 277 (295)
Q Consensus 250 D~~~~s~~K~l~gp~--gG~l~~~~~~~~~ 277 (295)
++++.|++|+|+.|. -|++++++++.+.
T Consensus 186 ~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~ 215 (330)
T TIGR01140 186 LVVLRSLTKFFGLAGLRLGFVVAHPALLAR 215 (330)
T ss_pred EEEEEecchhhcCchhhhhheeCCHHHHHH
Confidence 699999999886443 2999998876544
No 258
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.58 E-value=2.3e-14 Score=127.90 Aligned_cols=151 Identities=16% Similarity=0.095 Sum_probs=113.4
Q ss_pred HHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCC
Q 022564 98 QKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE 177 (295)
Q Consensus 98 ~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 177 (295)
.+.++.+.|++. .+.+.||.+|+..++..++++|++|+..+..|++......... ...|++. ..++.
T Consensus 83 e~~iaal~ga~~-----~l~fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~~l~~~~----~~~gie~--~~vd~-- 149 (409)
T KOG0053|consen 83 ESGIAALEGAAH-----ALLFSSGMAAITVALLHLLPAGDHIVATGDVYGGTLRILRKFL----PKFGGEG--DFVDV-- 149 (409)
T ss_pred HHHHHHHhCCce-----EEEecccHHHHHHHHHHhcCCCCcEEEeCCCcccHHHHHHHHH----HHhCcee--eeech--
Confidence 388888889886 6899999988887999999999999999988888755332211 1233222 22222
Q ss_pred CCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCC-cceEEEe
Q 022564 178 STGYIDYDQLEKSATLFRPKLIVAGASAYA--RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE-YADVVTT 254 (295)
Q Consensus 178 ~~~~id~e~l~~~i~~~~tk~i~l~~~n~~--~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~-~~D~~~~ 254 (295)
-|++.+++++++ ++++|++-.|.|| .+.|+++|.++||++|++|++|++-+.+ ....++. |||+++.
T Consensus 150 ----~~~~~~~~~i~~-~t~~V~~ESPsNPll~v~DI~~l~~la~~~g~~vvVDnTf~~p-----~~~~pL~lGADIV~h 219 (409)
T KOG0053|consen 150 ----DDLKKILKAIKE-NTKAVFLESPSNPLLKVPDIEKLARLAHKYGFLVVVDNTFGSP-----YNQDPLPLGADIVVH 219 (409)
T ss_pred ----hhHHHHHHhhcc-CceEEEEECCCCCccccccHHHHHHHHhhCCCEEEEeCCcCcc-----cccChhhcCCCEEEE
Confidence 267888888887 8999999644444 8889999999999999999999993322 2222333 4999999
Q ss_pred CCCCCCCCCce---EEEEEe
Q 022564 255 TTHKSLRGPRG---AMIFFR 271 (295)
Q Consensus 255 s~~K~l~gp~g---G~l~~~ 271 (295)
|..|+|+|..- |.++.+
T Consensus 220 SaTKyi~Ghsdvi~G~iv~n 239 (409)
T KOG0053|consen 220 SATKYIGGHSDVIGGSVVLN 239 (409)
T ss_pred eeeeeecCCcceeeeEEecC
Confidence 99999998654 777776
No 259
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.57 E-value=3.1e-14 Score=128.14 Aligned_cols=193 Identities=15% Similarity=0.079 Sum_probs=126.5
Q ss_pred cCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcC---CCCCCcceeEEeCCC
Q 022564 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR---LDPEKWGVNVQSLSG 121 (295)
Q Consensus 47 ~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g---~~~~~~~~~v~~~sG 121 (295)
+.++|+.++++ +|+.+++++.+.+.......|+ . ....+++ +.++++++ ++++ +|++|+|
T Consensus 20 ~~i~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~Y~------~-~~~~~Lr----~aia~~~~~~~~~~~----~i~it~G 84 (335)
T PRK14808 20 DRTYLALNENPFPFPEDLVDEVFRRLNSDTLRIYY------D-SPDEELI----EKILSYLDTDFLSKN----NVSVGNG 84 (335)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHhhhhhhhcCC------C-CChHHHH----HHHHHHhCCCCCCcc----eEEEcCC
Confidence 56899988884 6888999998766431111122 1 1345566 44555555 7776 8999999
Q ss_pred hH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEE
Q 022564 122 SP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIV 200 (295)
Q Consensus 122 ~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~ 200 (295)
++ ++..++.++ |.|++++ |.|..+...+...|.++..++ .+ +++.++.+. + . ++++++
T Consensus 85 a~~~i~~~~~~~----d~v~v~~--------P~y~~~~~~~~~~g~~~~~v~--~~-~~~~~~~~~----~-~-~~~~i~ 143 (335)
T PRK14808 85 ADEIIYVMMLMF----DRSVFFP--------PTYSCYRIFAKAVGAKFLEVP--LT-KDLRIPEVN----V-G-EGDVVF 143 (335)
T ss_pred HHHHHHHHHHHh----CcEEECC--------CCHHHHHHHHHHcCCeEEEec--CC-CcCCCChhH----c-c-CCCEEE
Confidence 99 777677766 6799998 455544445667786665554 55 345555332 2 2 578999
Q ss_pred EcCCCCC--CccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCC--cceEEEeCCCCCCC--CCceEEEEEeCCc
Q 022564 201 AGASAYA--RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE--YADVVTTTTHKSLR--GPRGAMIFFRKGV 274 (295)
Q Consensus 201 l~~~n~~--~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~--~~D~~~~s~~K~l~--gp~gG~l~~~~~~ 274 (295)
++++||| ...+.+++.+++ +++++||+|+++..- .. ......+. ..-+++.|++|.++ |.+-|++++++++
T Consensus 144 i~nP~NPTG~~~s~~~l~~l~-~~~~~ii~DE~Y~~f-~~-~~~~~~~~~~~~vi~~~S~SK~~~l~GlRvG~~v~~~~~ 220 (335)
T PRK14808 144 IPNPNNPTGHVFEREEIERIL-KTGAFVALDEAYYEF-HG-ESYVDLLKKYENLAVIRTFSKAFSLAAQRIGYVVSSEKF 220 (335)
T ss_pred EeCCCCCCCCCcCHHHHHHHH-hcCCEEEEECchhhh-cC-CchHHHHHhCCCEEEEEechhhccCcccceEEEEeCHHH
Confidence 9877774 788899999998 589999999996531 11 10000001 12377899999886 4455999998876
Q ss_pred hhhh
Q 022564 275 KEIN 278 (295)
Q Consensus 275 ~~~~ 278 (295)
.+..
T Consensus 221 ~~~l 224 (335)
T PRK14808 221 IDAY 224 (335)
T ss_pred HHHH
Confidence 5543
No 260
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.57 E-value=1.3e-14 Score=139.42 Aligned_cols=165 Identities=22% Similarity=0.205 Sum_probs=124.1
Q ss_pred HHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEee
Q 022564 95 SLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPY 173 (295)
Q Consensus 95 ~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 173 (295)
.++++..++.||++. ..++++|+| +|.+++++++.+||.||+...+|-|.+.. ++.++|+...++.-
T Consensus 177 ~eAq~~AA~~fgAd~-----tyFlvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~hg-------aLiLsGa~PVYl~P 244 (720)
T PRK13578 177 KDAQKHAAKVFNADK-----TYFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNHHG-------ALIQAGATPVYLET 244 (720)
T ss_pred HHHHHHHHHHhCCCc-----eEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHH-------HHHHcCCeEEEeec
Confidence 346689999999987 688899999 99999999999999999999988887642 12366765555432
Q ss_pred ecCCCC---CCCCH-----HHHHHHHhhc--------C-CcEEEEcCCCC-CCccCHHHHHHH-HHHcCCEEEEEccccc
Q 022564 174 RLNEST---GYIDY-----DQLEKSATLF--------R-PKLIVAGASAY-ARLYDYERIRKV-CNKQKAIMLADMAHIS 234 (295)
Q Consensus 174 ~~~~~~---~~id~-----e~l~~~i~~~--------~-tk~i~l~~~n~-~~~~~l~~I~~i-a~~~~~~vivD~a~~~ 234 (295)
..+ +. +.++. +.+++++++. + .|++++++++| |.+.++++|+++ ++.++ +|++|+||+.
T Consensus 245 ~~n-~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTYdG~~ydi~~I~~~~~h~~~-~llvDEAhga 322 (720)
T PRK13578 245 ARN-PFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTYDGTIYNARQVVDKIGHLCD-YILFDSAWVG 322 (720)
T ss_pred ccc-ccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCCcceeecHHHHHHHhhccCC-cEEEeCcchh
Confidence 221 11 23454 4488888763 1 48899988888 899999999998 68888 9999999987
Q ss_pred cccccCC----CCCCCC-cce----EEEeCCCCCCCCCce-EEEEEeCC
Q 022564 235 GLVAAGV----IPSPFE-YAD----VVTTTTHKSLRGPRG-AMIFFRKG 273 (295)
Q Consensus 235 g~~~~~~----~~~~~~-~~D----~~~~s~~K~l~gp~g-G~l~~~~~ 273 (295)
....... ....+. |+| +++-|.||++++-.. ++|.++++
T Consensus 323 h~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~alTQaS~LHvk~~ 371 (720)
T PRK13578 323 YEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHKKDN 371 (720)
T ss_pred hhccCcccccCChhhhhcCCCCCCeEEEEChhhcchhhhhHhhhhcCCc
Confidence 6544332 222233 689 999999999999877 88877664
No 261
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.56 E-value=1.1e-14 Score=132.20 Aligned_cols=196 Identities=10% Similarity=0.007 Sum_probs=124.9
Q ss_pred ceecCCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCC-hH-HHH
Q 022564 49 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSG-SP-SNF 126 (295)
Q Consensus 49 i~L~~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG-~~-a~~ 126 (295)
..+.+|....++.|++++........ ..+ .......++.+.+++.++++++++.+. +|++++| ++ ++.
T Consensus 5 ~~f~pGP~~~~~~v~~a~~~~~~~~~---~~~----hr~~~f~~~~~~~r~~l~~l~~~~~~~---~v~f~~gs~T~a~~ 74 (361)
T TIGR01366 5 GRFGSGPSKVRLEQLQALTTTAASLF---GTS----HRQAPVKNLVGRVREGLAELFSLPDGY---EVILGNGGATAFWD 74 (361)
T ss_pred CcccCCCcCCCHHHHHHHHhcCcccc---ccC----cCChHHHHHHHHHHHHHHHHhCCCCCc---eEEEECCchhHHHH
Confidence 45677888889999999875311100 000 011334567777999999999985432 6777544 55 777
Q ss_pred HHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEc--CC
Q 022564 127 QVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG--AS 204 (295)
Q Consensus 127 ~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~--~~ 204 (295)
+++.+++.+ +.+++..-+|+..+...... +...+ ++..++++ .+..++. .+.+ ++++|.++ .+
T Consensus 75 ~~~~~l~~~-~~l~i~~G~~~~~~~~~a~~----~~~~~-~~~~~~~~---~~~~~~~-----~~~~-~~~lV~~~h~et 139 (361)
T TIGR01366 75 AATFGLIEK-KSLHLSFGEFSSKFAKAVKL----APWLG-EPIIVTAD---PGSAPEP-----QADP-GVDVIAWAHNET 139 (361)
T ss_pred HHHHhcccc-cccEEecCHHHHHHHHHHHh----hhccC-CceEEecC---CCCCCCC-----ccCC-CCCEEEEcccCC
Confidence 788888743 22333333333221111100 00011 23444432 2223333 2344 89999886 33
Q ss_pred CCCCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCce-EEEEEeCCchhh
Q 022564 205 AYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEI 277 (295)
Q Consensus 205 n~~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~ 277 (295)
..|...|+++| ++++|+++++|++|++|..+.++.. +|++++|+||+|++|.| +++++++++.+.
T Consensus 140 ~tG~~~pi~~I---~~~~g~~~iVDavqs~g~~~idv~~-----~D~~~~s~~K~lg~~~Gl~~~~~s~~~~~~ 205 (361)
T TIGR01366 140 STGVAVPVRRP---EGSDDALVVIDATSGAGGLPVDIAE-----TDVYYFAPQKNFASDGGLWLAIMSPAALER 205 (361)
T ss_pred ccceecccccc---cccCCCeEEEEcCccccCCCCCHHH-----CCEEEEEchhhcCCCCceEEEEECHHHHhh
Confidence 34788998887 5899999999999999999988763 89999999999988878 888889886644
No 262
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.54 E-value=5.2e-14 Score=126.39 Aligned_cols=153 Identities=11% Similarity=0.102 Sum_probs=99.3
Q ss_pred HHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeec
Q 022564 97 CQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL 175 (295)
Q Consensus 97 ~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 175 (295)
+++.+++++|. + +|++|+|++ ++..++ .+.+||+|++++ |.|..+...++..|.++..+ +.
T Consensus 54 Lr~~ia~~~~~--~----~I~it~Gs~~al~~~~--~~~~gd~v~v~~--------P~y~~~~~~~~~~g~~~~~v--~~ 115 (330)
T PRK05664 54 LEAAARAYYGA--P----QLLPVAGSQAAIQALP--RLRAPGRVGVLS--------PCYAEHAHAWRRAGHQVREL--DE 115 (330)
T ss_pred HHHHHHHHhCC--C----CEEECcCHHHHHHHHH--HccCCCEEEEcC--------CChHHHHHHHHHcCCeEEEe--ch
Confidence 45788888885 3 799999999 666343 468999999999 44444444555667555333 22
Q ss_pred CCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccC---HHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcce
Q 022564 176 NESTGYIDYDQLEKSATLFRPKLIVAGASAYA--RLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYAD 250 (295)
Q Consensus 176 ~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~~--~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D 250 (295)
+++++.++ +++++++++|||| ...+ +++|+++|++++++||+|+++....-........-...-
T Consensus 116 ---------~~~~~~~~--~~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~~~~s~~~~~~~~~v 184 (330)
T PRK05664 116 ---------AEVEAALD--SLDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMDNTPQHSLAACAHRPGL 184 (330)
T ss_pred ---------hhHhhhhc--CCCEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcccCCCcccccccccCCCE
Confidence 34555553 6888888766664 4444 666777788999999999996432110111111100123
Q ss_pred EEEeCCCCCCC--CCceEEEEEeCCchhhh
Q 022564 251 VVTTTTHKSLR--GPRGAMIFFRKGVKEIN 278 (295)
Q Consensus 251 ~~~~s~~K~l~--gp~gG~l~~~~~~~~~~ 278 (295)
+++.|++|.++ |.+-|+++.++++.+..
T Consensus 185 i~~~SfSK~~gl~GlRiG~~v~~~~l~~~~ 214 (330)
T PRK05664 185 IVLRSFGKFFGLAGARLGFVLAEPALLRAL 214 (330)
T ss_pred EEEeeccccccCCCcceEEEEeCHHHHHHH
Confidence 78999999884 44559999988765543
No 263
>PRK08637 hypothetical protein; Provisional
Probab=99.52 E-value=4.8e-13 Score=122.78 Aligned_cols=178 Identities=16% Similarity=0.079 Sum_probs=109.3
Q ss_pred cCCcchHHHHHHHHHHHHHHHcC-CCCCCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCcccccccccc
Q 022564 84 YGGNEYIDMAESLCQKRALEAFR-LDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKI 161 (295)
Q Consensus 84 ~~~~~~~~~l~~~~~~~la~~~g-~~~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~ 161 (295)
|+...+..++++++.+++.+..+ .+++.+ .+|++|+|++ ++..++.++++|||+|++++|.|+.+.... .
T Consensus 40 Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~-~~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~-------~ 111 (388)
T PRK08637 40 YAPPQGIPELRDLWQEKMLRENPSLSGKKM-SLPIVTNALTHGLSLVADLFVDQGDTVLLPDHNWGNYKLTF-------N 111 (388)
T ss_pred CCCCCCCHHHHHHHHHHHhccCcccccccc-ceeeEccchHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHH-------H
Confidence 44556677788777776665432 332210 1689999999 777788888999999999996665553211 1
Q ss_pred ccceeeeEEEeeecCCCCCCCCHHHHHHHHh---hcCCcEEEEcCCCCC-----CccCHHHHHHHHHH-----cCCEEEE
Q 022564 162 SAVSIFFETMPYRLNESTGYIDYDQLEKSAT---LFRPKLIVAGASAYA-----RLYDYERIRKVCNK-----QKAIMLA 228 (295)
Q Consensus 162 ~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~---~~~tk~i~l~~~n~~-----~~~~l~~I~~ia~~-----~~~~viv 228 (295)
...|.++..++ +..+++.+|++++++.++ +..++++++++|||| +...+++|+++|++ |+++||+
T Consensus 112 ~~~g~~vv~v~--~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~iI~ 189 (388)
T PRK08637 112 TRRGAEIVTYP--IFDEDGGFDTDALKEALQAAYNKGKVIVILNFPNNPTGYTPTEKEATAIVEAIKELADAGTKVVAVV 189 (388)
T ss_pred HhcCCEEEEec--ccCCCCcCCHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEe
Confidence 13454454444 422345789999999886 223445556655664 34456677787765 8999999
Q ss_pred EccccccccccCCCCC---CC-C---cc-eEEEeCCCCCCC--CCceEEEEEe
Q 022564 229 DMAHISGLVAAGVIPS---PF-E---YA-DVVTTTTHKSLR--GPRGAMIFFR 271 (295)
Q Consensus 229 D~a~~~g~~~~~~~~~---~~-~---~~-D~~~~s~~K~l~--gp~gG~l~~~ 271 (295)
|+++..-.......+. .+ . .. -+.+.|++|.++ |.+-|++++.
T Consensus 190 De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~~~ 242 (388)
T PRK08637 190 DDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFITFG 242 (388)
T ss_pred cccchhcccCCccchhhHHHhhcccccceEEEeccccccCCCcccceEEEEEc
Confidence 9996532222111100 00 0 11 123459999764 4445999865
No 264
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.51 E-value=1.3e-13 Score=123.89 Aligned_cols=159 Identities=14% Similarity=0.103 Sum_probs=106.8
Q ss_pred HHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeec
Q 022564 97 CQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL 175 (295)
Q Consensus 97 ~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 175 (295)
+++.+++++|.+++ +|++|+|++ ++..++. ++++|+ |++++ |.|..+...++..|.++..+| +
T Consensus 45 lr~~ia~~~~~~~~----~I~it~Gs~~~l~~~~~-~~~~~~-vv~~~--------P~y~~y~~~~~~~G~~v~~vp--~ 108 (332)
T PRK06425 45 IEDQIKIYTQGLKI----KVLIGPGLTHFIYRLLS-YINVGN-IIIVE--------PNFNEYKGYAFTHGIRISALP--F 108 (332)
T ss_pred HHHHHHHHhCCCcc----eEEECCCHHHHHHHHHH-HhCCCc-EEEeC--------CChHHHHHHHHHcCCeEEEEe--C
Confidence 55889999999886 899999999 7765554 577764 77778 455555545667786665555 4
Q ss_pred CCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--Ccc---CHHHHHHHHHHcCCEEEEEccccccccccCCCC-CCC-C-
Q 022564 176 NESTGYIDYDQLEKSATLFRPKLIVAGASAYA--RLY---DYERIRKVCNKQKAIMLADMAHISGLVAAGVIP-SPF-E- 247 (295)
Q Consensus 176 ~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~~--~~~---~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~-~~~-~- 247 (295)
+. ..+|.+.+++ .++|++++|+|||| ... .+++|+++|++++++||+|++...-. ..+... ..+ .
T Consensus 109 ~~--~~~~~~~l~~----~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~-~~~~~~~~~~~~~ 181 (332)
T PRK06425 109 NL--INNNPEILNN----YNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFV-PNRAEEDVLLNRS 181 (332)
T ss_pred Cc--ccCcHHHHhh----cCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhccc-cccchhHHHHhcc
Confidence 42 3456555542 38999999866664 444 46678888999999999999954222 111100 000 0
Q ss_pred -cceEEEeCCCCCCC--CCceEEEEEeCCchhhh
Q 022564 248 -YADVVTTTTHKSLR--GPRGAMIFFRKGVKEIN 278 (295)
Q Consensus 248 -~~D~~~~s~~K~l~--gp~gG~l~~~~~~~~~~ 278 (295)
..-+++.|++|.++ |.+-|+++.++++.+..
T Consensus 182 ~~~vi~~~SfSK~~~l~GlRiGy~v~~~~li~~l 215 (332)
T PRK06425 182 YGNVIIGRSLTKILGIPSLRIGYIATDDYNMKIS 215 (332)
T ss_pred CCCEEEEeecHHhcCCchhhheeeecCHHHHHHH
Confidence 13477899999775 34449999988866543
No 265
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.51 E-value=1.1e-13 Score=116.99 Aligned_cols=212 Identities=19% Similarity=0.280 Sum_probs=151.8
Q ss_pred cCceecCCCCC---CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH
Q 022564 47 KGLELIPSENF---TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP 123 (295)
Q Consensus 47 ~~i~L~~~~~~---~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~ 123 (295)
+.+|+.+++=. ..|++.++-.+++.+ |..|..+.++--++..+. ..+...++++.+-+. .|+..+|-.
T Consensus 68 ~ilnFcaNnYLGLsshPeii~a~~~alee-yGaGlssvrfIcGtq~iH---k~LE~kiAqfh~rED-----~ilypscfd 138 (417)
T KOG1359|consen 68 KILNFCANNYLGLSSHPEIINAGQKALEE-YGAGLSSVRFICGTQDIH---KLLESKIAQFHGRED-----TILYPSCFD 138 (417)
T ss_pred ceeeecccccccccCChHHHHHHHHHHHH-hCCCccceeEEecchHHH---HHHHHHHHHHhCCCc-----eEEeccccc
Confidence 34555444321 378999999999877 766665555544444433 334588898887654 788989999
Q ss_pred HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhh---cCCcEEE
Q 022564 124 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL---FRPKLIV 200 (295)
Q Consensus 124 a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~---~~tk~i~ 200 (295)
||..++.+++.|.|.|+.....|.+.+. ++++.. ....+|+-.++..+.+ .+-|+|+
T Consensus 139 ANag~feail~pedAvfSDeLNhASIId--------GirLck------------ry~h~dv~~l~~~l~~a~k~r~klv~ 198 (417)
T KOG1359|consen 139 ANAGAFEAILTPEDAVFSDELNHASIID--------GIRLCK------------RYRHVDVFDLEHCLISACKMRLKLVV 198 (417)
T ss_pred cchHHHHHhcChhhhhhccccccchhhh--------hhHHHh------------hhccchhHHHHHHHHHhhhheEEEEE
Confidence 9999999999999999988877777654 333321 1235566667665542 2445555
Q ss_pred Ec--CCCCCCccCHHHHHHHHHHcCCEEEEEccccccccccC---CCC-CCC-CcceEEEeCCCCCCCCCceEEEEEeCC
Q 022564 201 AG--ASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAG---VIP-SPF-EYADVVTTTTHKSLRGPRGAMIFFRKG 273 (295)
Q Consensus 201 l~--~~n~~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~---~~~-~~~-~~~D~~~~s~~K~l~gp~gG~l~~~~~ 273 (295)
-. .+.-|...|+++|.+++++||.++++|++|+.|..... ... .+. ..+|++..+..|.++|-.||+..+.++
T Consensus 199 TDg~FSMDGdiaPl~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlGga~GGyttgp~~ 278 (417)
T KOG1359|consen 199 TDGVFSMDGDIAPLEEISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALGGASGGYTTGPKP 278 (417)
T ss_pred ecceeccCCCcccHHHHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhcCCCCCCccCChh
Confidence 53 56668999999999999999999999999998876532 111 111 248999999999999999999999999
Q ss_pred chhh-hccCCeeEEE
Q 022564 274 VKEI-NKQGKEFTCR 287 (295)
Q Consensus 274 ~~~~-~~~~~~~~~~ 287 (295)
+.+. .++++++.|-
T Consensus 279 li~llrqr~RpylFS 293 (417)
T KOG1359|consen 279 LISLLRQRSRPYLFS 293 (417)
T ss_pred HHHHHHhcCCceeec
Confidence 8765 4555777663
No 266
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.51 E-value=1e-13 Score=117.30 Aligned_cols=195 Identities=19% Similarity=0.230 Sum_probs=133.2
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhc-CCC
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALL-KPH 136 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~-~~g 136 (295)
|..+++++|.++... ..-|+..+....|| +..++++|.+. .++++||+..|+.+++.-+ .+|
T Consensus 34 PTdeMr~am~eA~vg--------DdVyGeD~tt~rLE----~~vA~l~GKEA-----gLFv~SGTmgNllaIm~Hc~~rg 96 (384)
T KOG1368|consen 34 PTDEMRRAMAEASVG--------DDVYGEDPTTNRLE----QRVAELFGKEA-----GLFVPSGTMGNLLAIMVHCHQRG 96 (384)
T ss_pred ChHHHHHHHhhcccC--------cccccCCccHHHHH----HHHHHHhCccc-----eeeecccccccHHHHHHHhcCCC
Confidence 577888888876532 11234434445566 78899999887 7899999997776666655 599
Q ss_pred CeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhc-------CCcEEEEc-CCCC-C
Q 022564 137 DRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF-------RPKLIVAG-ASAY-A 207 (295)
Q Consensus 137 d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~-------~tk~i~l~-~~n~-~ 207 (295)
.+|++-+..|--.+... ....+.|. ...++... +++.+|+++||+++..+ .|++|.+- ..|+ |
T Consensus 97 ~eii~gd~~HI~~~E~g-----g~s~l~gv--~~~tv~~e-~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~G 168 (384)
T KOG1368|consen 97 SEIIVGDRAHIHRYEQG-----GISQLAGV--HVRTVKNE-NDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCG 168 (384)
T ss_pred ceEEeccchheeehhcc-----Chhhhccc--eeEeeeeC-CCCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccC
Confidence 99998774432111111 01234553 33444333 67899999999999732 37899985 4444 4
Q ss_pred -CccCHH---HHHHHHHHcCCEEEEEccccccc-cccCCCCCCCC-cceEEEeCCCCCCCCCceEEEEEeCCchhh
Q 022564 208 -RLYDYE---RIRKVCNKQKAIMLADMAHISGL-VAAGVIPSPFE-YADVVTTTTHKSLRGPRGAMIFFRKGVKEI 277 (295)
Q Consensus 208 -~~~~l~---~I~~ia~~~~~~vivD~a~~~g~-~~~~~~~~~~~-~~D~~~~s~~K~l~gp~gG~l~~~~~~~~~ 277 (295)
...|++ ++.++|++||+.++.|+|.-... +..++....+. .+|.+..+++|.+++|-|.++++++++.+-
T Consensus 169 g~vlPle~~~~v~~lak~~glkLH~DGARi~NAavasgV~vk~i~~~fDSVsiCLSKglgAPVGSViVG~k~FI~k 244 (384)
T KOG1368|consen 169 GKVLPLEELDRVKALAKRHGLKLHMDGARIFNAAVASGVPVKKICSAFDSVSICLSKGLGAPVGSVIVGSKDFIDK 244 (384)
T ss_pred ceEeeHHHHHHHHHHHhccCCeeecchhhhhhHHHHcCCCHHHHHHhhhhhhhhhhccCCCCcccEEEccHHHHHH
Confidence 566655 67789999999999999965332 22333211111 489999999999999999999999998653
No 267
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=99.51 E-value=1.4e-14 Score=127.69 Aligned_cols=201 Identities=17% Similarity=0.202 Sum_probs=43.5
Q ss_pred CCCCCCHHHHHHHhhhhhccCCC-CCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhh
Q 022564 54 SENFTSVSVMQAVGSVMTNKYSE-GYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTAL 132 (295)
Q Consensus 54 ~~~~~~~~v~~al~~~l~~~~~~-g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al 132 (295)
|-.+.++++.+++.+...+ |.. .|.-.....+..+ . .+.+.++.++|++. .+++.++++|.+.++.++
T Consensus 14 GRs~l~~~a~~a~~~~a~~-Y~nLE~dl~~G~Rg~R~-~----~v~~ll~~ltgAea-----A~VvNnnaAAv~L~l~~l 82 (367)
T PF03841_consen 14 GRSPLSEEAIEAVAEVASG-YSNLEYDLETGKRGSRY-A----HVEELLCELTGAEA-----ALVVNNNAAAVLLALNTL 82 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccccccccc-ccccccccccccccccc-c----cccccccccccccc-----cccccccccccccccccc
Confidence 5556789999999887655 321 1110000111111 1 24477888899875 566667777776455555
Q ss_pred cCCCCeEEEec---CCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEE-EcCCCC--
Q 022564 133 LKPHDRIMALD---LPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIV-AGASAY-- 206 (295)
Q Consensus 133 ~~~gd~Vl~~~---~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~-l~~~n~-- 206 (295)
. +|.+|+++. .+.++.+.... .+...|... +.+.. +..-.+++++++|++ +|.+++ +..||+
T Consensus 83 a-~~~EvIvsRGelVeiGgsFRip~-----vm~~sGa~l--vEVGt---tN~t~~~Dye~AI~e-~Ta~ll~Vh~Sn~~i 150 (367)
T PF03841_consen 83 A-KGKEVIVSRGELVEIGGSFRIPD-----VMRQSGARL--VEVGT---TNRTHLSDYEKAITE-NTAALLKVHTSNFRI 150 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred c-ccccccccccccccccccccccc-----ccccccccc--ccccc---ccccccccccccccc-ccccccccccccccc
Confidence 4 567787765 23344333222 233455444 44343 245578889999988 888775 457777
Q ss_pred -C--CccCHHHHHHHHHHcCCEEEEEccccccccc----cCC------CCCCCCcceEEEeCCCCCCCCCceEEEEEeCC
Q 022564 207 -A--RLYDYERIRKVCNKQKAIMLADMAHISGLVA----AGV------IPSPFEYADVVTTTTHKSLRGPRGAMIFFRKG 273 (295)
Q Consensus 207 -~--~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~----~~~------~~~~~~~~D~~~~s~~K~l~gp~gG~l~~~~~ 273 (295)
| ...++++++++|++|++++++|.+. |.+. .++ ...--.|+|+++||+.|.|+||+.|+++++++
T Consensus 151 ~GFt~~~~~~el~~la~~~~lp~i~Dlgs--G~l~dl~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLGGPQaGiI~Gkk~ 228 (367)
T PF03841_consen 151 QGFTGEVSLEELAELAKEHGLPVIVDLGS--GLLVDLSPYGLPDEPTVQEYLAAGADLVTFSGDKLLGGPQAGIIVGKKE 228 (367)
T ss_dssp ----------HHHHHHHHHT--EEEE-TT--HHHHHHHTT----------CCCCT-SEEEEETTSSSSS-S-EEEEEEHH
T ss_pred ccccccccHHHHHHHHhhcCCcEEEECCC--CCCcCcccccCccccHHHHHhhcCCCEEEEECCCcCCCCCeEEEEeCHH
Confidence 2 5668999999999999999999984 2221 111 11112379999999999999999999999999
Q ss_pred chhhhc
Q 022564 274 VKEINK 279 (295)
Q Consensus 274 ~~~~~~ 279 (295)
+.+..+
T Consensus 229 lI~~lk 234 (367)
T PF03841_consen 229 LIEKLK 234 (367)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 877543
No 268
>PLN02452 phosphoserine transaminase
Probab=99.50 E-value=2.7e-13 Score=122.73 Aligned_cols=209 Identities=14% Similarity=0.098 Sum_probs=132.1
Q ss_pred cCceecCCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeC-CChH-H
Q 022564 47 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSL-SGSP-S 124 (295)
Q Consensus 47 ~~i~L~~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~-sG~~-a 124 (295)
+.+++++|...+|++|++++.+.+.+.-..|..--.....++...++.+.+++.++++++.+.+ | .|++. .|++ +
T Consensus 7 ~~~~f~pGP~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~f~~i~~~~~~~L~~l~~~p~~-y--~v~~l~Gsgt~~ 83 (365)
T PLN02452 7 RVFNFSAGPATLPANVLAKAQAELYNWEGSGMSVMEMSHRGKEFLSIIQKAEADLRELLDIPDN-Y--EVLFLQGGASTQ 83 (365)
T ss_pred ceEeeeCCCCCCCHHHHHHHHHHHhcccccCccccccCCCchHHHHHHHHHHHHHHHHhCCCCC-c--eEEEEeCccHHH
Confidence 3578999999999999999998775521112110001112244567888899999999998533 3 44443 3333 8
Q ss_pred HHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEc--
Q 022564 125 NFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-- 202 (295)
Q Consensus 125 ~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~-- 202 (295)
+.+++..++.+||++++... +.++-.. . +.+...|........+.......+++++++. .+ +.+.|.++
T Consensus 84 ~ea~~~nl~~~~~~~l~~~~---G~fg~r~--~-~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~v~~~hn 154 (365)
T PLN02452 84 FAAIPLNLCKPGDKADFVVT---GSWSKKA--A-KEAKKYCKTNVIASGKDEKYTKIPSVSEWEL--TP-DAKFVHICAN 154 (365)
T ss_pred HHHHHHhcCCCCCeEEEEEC---CHHHHHH--H-HHHHHhCCCcEEEecCCCCCCCCCChHHcCC--CC-CCcEEEECCC
Confidence 88899999999999998772 2211111 1 1222334322222101110112567777532 22 56777775
Q ss_pred CCCCCC-ccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCce-EEEEEeCCchhhhc
Q 022564 203 ASAYAR-LYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINK 279 (295)
Q Consensus 203 ~~n~~~-~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~~~ 279 (295)
.+..|. ..|++++. ++++++|+++++|..+.++..+. +|+ +|+||++ ||.| |++++|+++.+...
T Consensus 155 ETstGv~~~~~~~i~------~~~lvVDa~Ss~g~~pidv~~~~---v~~--~saqK~l-GP~Gl~~v~vr~~~l~~~~ 221 (365)
T PLN02452 155 ETIHGVEFKDYPDVG------NVPLVADMSSNFLSKPVDVSKYG---VIY--AGAQKNV-GPSGVTIVIIRKDLIGNAR 221 (365)
T ss_pred CCCCcEecCcccccC------CCeEEEECCccccCcccCHHHcC---EEE--Eeccccc-CCCCeEEEEEcHHHHhhcc
Confidence 333355 36776664 38999999999999998887755 544 6999988 6999 99999999876543
No 269
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.50 E-value=6.4e-13 Score=126.53 Aligned_cols=176 Identities=16% Similarity=0.122 Sum_probs=116.1
Q ss_pred CCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhh--cC--C-----CC-----------------
Q 022564 85 GGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTAL--LK--P-----HD----------------- 137 (295)
Q Consensus 85 ~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al--~~--~-----gd----------------- 137 (295)
..++....+|+++.+++++++|.+.. | .+ +|+|++ +|+.++.+. .. | +.
T Consensus 116 e~SP~~t~lE~~vi~~la~l~G~~~~-~--G~-~TsGGT~ANl~aL~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~ 191 (608)
T TIGR03811 116 ESSPATSQMEEEVGKEFATLMGYKNG-W--GH-IVADGSLANLEGLWYARNIKSLPFAMKEVKPELVAGKSDWELLNMPT 191 (608)
T ss_pred ccCchHHHHHHHHHHHHHHHhCCCCC-C--eE-EeCChHHHHHHHHHHHHHhhhccchhhhccccccccccchhhccccc
Confidence 34456788999999999999999753 4 44 667777 877654432 11 0 00
Q ss_pred --------------------------------eEEEecCCCCcccCccccccccccccceeee-EEEeeecCCCCCCCCH
Q 022564 138 --------------------------------RIMALDLPHGGHLSHGYQTDTKKISAVSIFF-ETMPYRLNESTGYIDY 184 (295)
Q Consensus 138 --------------------------------~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~v~~~~~~~~~~id~ 184 (295)
.++++...|.++. +++.+.|... .++.++++ +++++|+
T Consensus 192 ~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~--------KAa~ilGlG~~~vv~VpvD-~~~rmd~ 262 (608)
T TIGR03811 192 KEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWL--------KAADIIGIGLDQVIPVPVD-SNYRMDI 262 (608)
T ss_pred ccccccccccccchhhhhhhccccccccccceEEEECCCccHHHH--------HHHHHcCCCcccEEEeecC-CCCcCCH
Confidence 3444443343332 2445666531 12344466 6789999
Q ss_pred HHHHHHHhhc---C--CcEEEEc--CCCCCCccCHHHHHHHH---HHcCC--EEEEEccccccc--cccC-C--------
Q 022564 185 DQLEKSATLF---R--PKLIVAG--ASAYARLYDYERIRKVC---NKQKA--IMLADMAHISGL--VAAG-V-------- 241 (295)
Q Consensus 185 e~l~~~i~~~---~--tk~i~l~--~~n~~~~~~l~~I~~ia---~~~~~--~vivD~a~~~g~--~~~~-~-------- 241 (295)
++|++.+++. + +-+|+.+ .+..|.+.|+++|+++| +++|+ |+++|+|++... +..+ .
T Consensus 263 ~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~~~~~~p~~~ 342 (608)
T TIGR03811 263 NELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFYLHVDAAYGGYGRAIFLDEDDNFIPYDD 342 (608)
T ss_pred HHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCceeEeeeccccchhhhhhccccccccccch
Confidence 9999998641 2 2233333 56668999999999999 67887 699999976432 1111 0
Q ss_pred ----------C--------C------CCCCcceEEEeCCCCCCCCCce-EEEEEeCC
Q 022564 242 ----------I--------P------SPFEYADVVTTTTHKSLRGPRG-AMIFFRKG 273 (295)
Q Consensus 242 ----------~--------~------~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~ 273 (295)
. + .++..+|.++.++|||+..|.+ |++++|+.
T Consensus 343 ~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK~g~~Py~~G~ll~Rd~ 399 (608)
T TIGR03811 343 LQEVHAEYGVFTEKKEYISREVYNAYKAISEAESVTIDPHKMGYIPYSAGGIVIQDI 399 (608)
T ss_pred hhcccccccccccccccccHhHHHHHhcCcCceEEEeCcccccccCCCeEEEEEeCH
Confidence 0 0 1245799999999999999999 99999986
No 270
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.48 E-value=2.1e-13 Score=122.91 Aligned_cols=153 Identities=14% Similarity=0.095 Sum_probs=97.9
Q ss_pred HHHHHHHHcCCCC-CCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeee
Q 022564 97 CQKRALEAFRLDP-EKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYR 174 (295)
Q Consensus 97 ~~~~la~~~g~~~-~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 174 (295)
+++.+++++|++. + +|++|+|++ ++. ++..++++|| |+++. |.|..|...+...|.++ ++++
T Consensus 58 L~~~ia~~~~~~~~~----~I~i~~Gs~e~i~-~l~~~~~~g~-v~v~~--------P~y~~y~~~~~~~g~~~--~~v~ 121 (339)
T PRK06959 58 LAACAARYYGAPDAA----HVLPVAGSQAAIR-ALPALLPRGR-VGIAP--------LAYSEYAPAFARHGHRV--VPLD 121 (339)
T ss_pred HHHHHHHHhCCCCcc----cEEECcCHHHHHH-HHHHhcCCCe-EEEcC--------CCcHHHHHHHHHCCCEE--Eeec
Confidence 6689999999964 5 899999999 666 4455678887 88888 44444444555667554 4433
Q ss_pred cCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccCHHHHH---HHHHHcCCEEEEEccccccccccCCCCCCCCc-
Q 022564 175 LNESTGYIDYDQLEKSATLFRPKLIVAGASAYA--RLYDYERIR---KVCNKQKAIMLADMAHISGLVAAGVIPSPFEY- 248 (295)
Q Consensus 175 ~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~~--~~~~l~~I~---~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~- 248 (295)
.+. +. +.+ +++++++|+|||| ...+.+++. +.|+++++++|+|+++............. ..
T Consensus 122 ~~~-------~~----~~~-~~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~~s~~~~~-~~~ 188 (339)
T PRK06959 122 EAA-------DT----LPA-ALTHLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADTLPAASLAAHT-DRP 188 (339)
T ss_pred ccc-------hh----ccc-cCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCccCCCcccchhcc-CCC
Confidence 331 22 222 5678888866774 555555554 44667899999999976432111111100 11
Q ss_pred ceEEEeCCCCCCC--CCceEEEEEeCCchhhh
Q 022564 249 ADVVTTTTHKSLR--GPRGAMIFFRKGVKEIN 278 (295)
Q Consensus 249 ~D~~~~s~~K~l~--gp~gG~l~~~~~~~~~~ 278 (295)
--+++.|++|.|+ |.+-|++++++++.+..
T Consensus 189 ~vi~l~SfSK~~gl~GlRiGy~v~~~~li~~l 220 (339)
T PRK06959 189 GLVVLRSVGKFFGLAGVRAGFVLAAPALLAAL 220 (339)
T ss_pred CEEEEecChhhcCCcchheEEEecCHHHHHHH
Confidence 2278999999874 44559999988765543
No 271
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.45 E-value=1.8e-12 Score=129.06 Aligned_cols=189 Identities=10% Similarity=0.017 Sum_probs=127.5
Q ss_pred CCHHHHHHHhhhhhc--cCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhh-c
Q 022564 58 TSVSVMQAVGSVMTN--KYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTAL-L 133 (295)
Q Consensus 58 ~~~~v~~al~~~l~~--~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al-~ 133 (295)
+|+.+.+++.+...- .| ..|.. .-+++.-+...+.+..+++++|++++ ++.++.+++ +..++++++ +
T Consensus 117 ~P~~v~~~i~~~~~~~Tay-tPYqa----EisQG~lqal~~~Qt~ia~LtG~~~a----naSL~d~aTAaaea~~~a~~~ 187 (993)
T PLN02414 117 VPPVILRNILENPGWYTQY-TPYQA----EIAQGRLESLLNYQTMITDLTGLPMS----NASLLDEGTAAAEAMAMCNNI 187 (993)
T ss_pred CCHHHHHHHHhChHHHhhc-CCCch----HHHHHHHHHHHHHHHHHHHHhCCChh----hEeecCChHHHHHHHHHHHhc
Confidence 677777888765431 12 11111 01133334444578999999999986 899999999 555566666 5
Q ss_pred CCC--CeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCC-CCCCcc
Q 022564 134 KPH--DRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGAS-AYARLY 210 (295)
Q Consensus 134 ~~g--d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~-n~~~~~ 210 (295)
.+| |+|++++.+|+++..++... ++..|.+++.++ .+ . .+ ...+ .+..+++..+ ++|.+.
T Consensus 188 ~~g~~~~VlVs~~~hP~~~~v~~t~----a~~~GieV~~v~--~~-~---~~------~~~~-~v~~vlvq~P~~~G~v~ 250 (993)
T PLN02414 188 LKGKKKKFLIASNCHPQTIDVCQTR----ADGLGLEVVVAD--EK-D---FD------YSSG-DVCGVLVQYPATDGEVL 250 (993)
T ss_pred ccCCCCEEEEcCccCHhHHHHHHHh----hhhcCCEEEEec--ch-h---hc------cccC-ceEEEEEecCCCCeEEc
Confidence 644 78999999999987665322 223454454444 22 1 11 1112 3445556654 457889
Q ss_pred CHHHHHHHHHHcCCEEEEEccccccccccC-CCCCCCCcceEEEeCCCCCC-----CCCceEEEEEeCCchh
Q 022564 211 DYERIRKVCNKQKAIMLADMAHISGLVAAG-VIPSPFEYADVVTTTTHKSL-----RGPRGAMIFFRKGVKE 276 (295)
Q Consensus 211 ~l~~I~~ia~~~~~~vivD~a~~~g~~~~~-~~~~~~~~~D~~~~s~~K~l-----~gp~gG~l~~~~~~~~ 276 (295)
|+++|+++||++|+++++ +++..+..... .... |+|++++++|||+ +||..|++++++++..
T Consensus 251 dv~~I~~~ah~~GaL~iV-aad~lal~~l~~pge~---GADi~vgsgqKwg~P~G~GGP~aGflavr~~~~r 318 (993)
T PLN02414 251 DYAEFVKNAHANGVKVVM-ATDLLALTMLKPPGEW---GADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKR 318 (993)
T ss_pred CHHHHHHHHHHcCCEEEE-EECHHHhcCCCCHhhc---cCcEEEECCCccccCCCCCCCCeeEEEECHHHHh
Confidence 999999999999999999 88887776653 2223 5999999999998 6777799999998644
No 272
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.45 E-value=2e-12 Score=129.13 Aligned_cols=163 Identities=13% Similarity=0.034 Sum_probs=116.3
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhh-cCCC--CeEEEecCCCCcccCccccccccccccc
Q 022564 89 YIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTAL-LKPH--DRIMALDLPHGGHLSHGYQTDTKKISAV 164 (295)
Q Consensus 89 ~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al-~~~g--d~Vl~~~~~~~~~~~~~~~~~~~~~~~~ 164 (295)
+.-+.....+..+++++|++.. ++.+..+++ +..++++++ ++++ |+|++++.+|+++...+... +...
T Consensus 118 G~Leal~~~Qt~la~LtG~~~a----naSl~d~aTAa~ea~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~----a~~~ 189 (954)
T PRK05367 118 GRLEALLNFQTMVADLTGLEIA----NASLLDEATAAAEAMALAKRVSKSKSNRFFVDDDVHPQTLDVLRTR----AEPL 189 (954)
T ss_pred HHHHHHHHHHHHHHHHHCCChh----hccccccHHHHHHHHHHhhhhccCCCCEEEEcCccCHHHHHHHHHH----HHhC
Confidence 3344444688999999999986 889988888 555566666 5554 99999999998887654321 1234
Q ss_pred eeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCC-CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCC
Q 022564 165 SIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY-ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIP 243 (295)
Q Consensus 165 g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~-~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~ 243 (295)
|.+++.++ .+ + |.+ .+ ++.++++..||+ |.+.|+++|+++||++|+++++|+.+.+..+......
T Consensus 190 G~ev~~~~--~~-~----d~~------~~-~~~~vlvq~p~~~G~i~d~~~i~~~ah~~Gal~~vda~~~Al~~l~~pge 255 (954)
T PRK05367 190 GIEVVVGD--AA-K----ALD------HD-DVFGVLLQYPGTSGEVRDYTALIAAAHARGALVAVAADLLALTLLTPPGE 255 (954)
T ss_pred CCEEEEec--Cc-c----CCC------cc-cEEEEEEecCCCCeeeccHHHHHHHHHHcCCEEEEEehhhhccCCCChhh
Confidence 54554454 32 1 111 22 566666665554 7888999999999999999999998754444433333
Q ss_pred CCCCcceEEEeCCCCC-----CCCCceEEEEEeCCchh
Q 022564 244 SPFEYADVVTTTTHKS-----LRGPRGAMIFFRKGVKE 276 (295)
Q Consensus 244 ~~~~~~D~~~~s~~K~-----l~gp~gG~l~~~~~~~~ 276 (295)
. |+|++++++||| |+||..|++++++++..
T Consensus 256 ~---GaDi~vgs~qkfg~P~g~GGP~aGflavr~~~~r 290 (954)
T PRK05367 256 M---GADIAVGSAQRFGVPMGFGGPHAAYFAVRDAYKR 290 (954)
T ss_pred c---CCCEEEeeCcccCCCCCCCCCCEEEEEECHHHHh
Confidence 3 499999999999 78886699999998653
No 273
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.45 E-value=1.4e-12 Score=125.43 Aligned_cols=161 Identities=17% Similarity=0.115 Sum_probs=119.0
Q ss_pred HHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeee
Q 022564 96 LCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYR 174 (295)
Q Consensus 96 ~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 174 (295)
++++..++.||++. ..++++|+| +|.+++++++.+||.||+...+|-|.+. ++.+.|+...++.-.
T Consensus 199 eAe~~aA~~fgAd~-----tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~~--------aLilsga~PVYl~P~ 265 (713)
T PRK15399 199 EAEEYIARTFGAEQ-----SYIVTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSLAH--------LLMMSDVVPIWLKPT 265 (713)
T ss_pred HHHHHHHHHhCCCc-----EEEEeCChHHHHHHHHHHhcCCCCEEEeecccHHHHHH--------HHHHcCCeeEEeccc
Confidence 46688999999987 688899999 9998999999999999999998888765 334677655544311
Q ss_pred cCCCC---CCCCH-----HHHHHHHhhc----CCcEEEEcCCCC-CCccCHHHHHHHHHHcCCEE-EEEccccccccccC
Q 022564 175 LNEST---GYIDY-----DQLEKSATLF----RPKLIVAGASAY-ARLYDYERIRKVCNKQKAIM-LADMAHISGLVAAG 240 (295)
Q Consensus 175 ~~~~~---~~id~-----e~l~~~i~~~----~tk~i~l~~~n~-~~~~~l~~I~~ia~~~~~~v-ivD~a~~~g~~~~~ 240 (295)
.+ +. +.++. +.+++++++. +++++++++++| |.+.++++|.++| |+.+ ++|+||+.......
T Consensus 266 ~n-~~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pTYdGi~yd~~~I~~~~---g~~~ilvDEAhgah~~F~p 341 (713)
T PRK15399 266 RN-ALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNSTYDGLLYNTDWIKQTL---DVPSIHFDSAWVPYTHFHP 341 (713)
T ss_pred cc-ccCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECCCCCceeeCHHHHHHHh---CCCEEEEeccchhhhhcCc
Confidence 11 11 23455 8999998752 236888888888 8999999999999 6665 69999986553333
Q ss_pred CCC--CCCC---cceEE---EeCCCCCCCCCce-EEEEEeCC
Q 022564 241 VIP--SPFE---YADVV---TTTTHKSLRGPRG-AMIFFRKG 273 (295)
Q Consensus 241 ~~~--~~~~---~~D~~---~~s~~K~l~gp~g-G~l~~~~~ 273 (295)
..+ .++. ++|.+ +-|.||++++... ++|.++..
T Consensus 342 ~~~~~sam~~~~~aD~~i~~tQStHKtL~alTQaS~iHvk~~ 383 (713)
T PRK15399 342 IYQGKSGMSGERVPGKVIFETQSTHKMLAAFSQASLIHIKGE 383 (713)
T ss_pred ccCCcChhhCCCCCCeeeeeeeehhccccccchheeeeecCC
Confidence 221 2221 46766 9999999999877 88888664
No 274
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.44 E-value=8.6e-13 Score=126.82 Aligned_cols=163 Identities=16% Similarity=0.081 Sum_probs=121.3
Q ss_pred HHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEee
Q 022564 95 SLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPY 173 (295)
Q Consensus 95 ~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 173 (295)
.++++..++.||++. ..++++|+| +|.+++++++.+||.||+...+|-|.+. ++.+.|+...++.-
T Consensus 198 ~eAe~~AA~~fgAd~-----tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~h--------aLilsga~PVYl~P 264 (714)
T PRK15400 198 KEAEEYIARVFNADR-----SYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTH--------LMMMSDVTPIYFRP 264 (714)
T ss_pred HHHHHHHHHHhCCCc-----EEEEeCchHHHHHHHHHHhcCCCCEEEeecccHHHHHH--------HHHHcCCeEEEecc
Confidence 346689999999987 688899999 9998999999999999999998888765 33467765555432
Q ss_pred ecCCCC---CCCC-----HHHHHHHHhhc-CCc---EEEEcCCCC-CCccCHHHHHHHHHHcCCEEEEEccccccccccC
Q 022564 174 RLNEST---GYID-----YDQLEKSATLF-RPK---LIVAGASAY-ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAG 240 (295)
Q Consensus 174 ~~~~~~---~~id-----~e~l~~~i~~~-~tk---~i~l~~~n~-~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~ 240 (295)
..+ +. +.++ .+.+++++++. +.+ .+++++++| |.+.+++.|.++|+.++ +++|+||+.......
T Consensus 265 ~rn-~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pTYdG~~yd~~~I~~~~~~~~--ilvDEAwgah~~F~p 341 (714)
T PRK15400 265 TRN-AYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTYDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSP 341 (714)
T ss_pred ccc-ccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECCCCccEecCHHHHHHHhCCCC--EEEEccchhhhccCc
Confidence 221 11 2345 89999999752 223 688887788 89999999999999887 799999987654433
Q ss_pred CCC--CCC-Ccc---e--EEEeCCCCCCCCCce-EEEEEeCC
Q 022564 241 VIP--SPF-EYA---D--VVTTTTHKSLRGPRG-AMIFFRKG 273 (295)
Q Consensus 241 ~~~--~~~-~~~---D--~~~~s~~K~l~gp~g-G~l~~~~~ 273 (295)
..+ .++ .++ | +++-|.||++++... ++|.++..
T Consensus 342 ~~~~~sam~~ga~~~~~i~vtQStHKtL~alTQaS~LHvkg~ 383 (714)
T PRK15400 342 IYEGKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGD 383 (714)
T ss_pred ccCCcChhhcCCCCCCceEEEEchhhcccchhHHhHHHHcCC
Confidence 322 333 245 5 999999999998776 77766543
No 275
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.44 E-value=1.2e-12 Score=118.54 Aligned_cols=209 Identities=13% Similarity=0.116 Sum_probs=133.3
Q ss_pred CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcC-C
Q 022564 57 FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLK-P 135 (295)
Q Consensus 57 ~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~-~ 135 (295)
.+++...++|.. . ...|++.+....|+ +.+++++|.+. .+...+|..++..++..+++ |
T Consensus 54 apS~~m~aAM~~--G---------DD~Y~gdpSv~~Le----e~vael~G~E~-----alpthqGRgaE~Il~~~~~~~~ 113 (467)
T TIGR02617 54 AVTQSMQAAMMR--G---------DEAYSGSRSYYALA----ESVKNIFGYQY-----TIPTHQGRGAEQIYIPVLIKKR 113 (467)
T ss_pred CCCHHHHHHHHc--C---------CcccccCchHHHHH----HHHHHHhCCce-----EEECCCCchHHHHHHHhhcccc
Confidence 478888888864 1 12255556666666 77888999875 45555776687867778888 7
Q ss_pred CCeEEEecC----CCCcccCccccccccccccceeeeEEEeee------cC-CCCCCCCHHHHHHHHhhc---CCcEEEE
Q 022564 136 HDRIMALDL----PHGGHLSHGYQTDTKKISAVSIFFETMPYR------LN-ESTGYIDYDQLEKSATLF---RPKLIVA 201 (295)
Q Consensus 136 gd~Vl~~~~----~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~------~~-~~~~~id~e~l~~~i~~~---~tk~i~l 201 (295)
||++.+... .|..++.... -.+.+.|.....++.+ .+ +..+.+|+++++++|++. +.-.+..
T Consensus 114 g~e~g~~~~~~~v~hn~~fett~----g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~~i~~v~~ 189 (467)
T TIGR02617 114 EQEKGLDRSKMVAFSNYFFDTTQ----GHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVA 189 (467)
T ss_pred cccccccccccccceEEEEecch----HHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCCCCceeeee
Confidence 888875442 2333322111 1234556443332211 11 124789999999999852 3333333
Q ss_pred cCCCC---C---CccCHHHHHHHHHHcCCEEEEEcccccc-cc--------ccCCCCCC-----CCcceEEEeCCCCCCC
Q 022564 202 GASAY---A---RLYDYERIRKVCNKQKAIMLADMAHISG-LV--------AAGVIPSP-----FEYADVVTTTTHKSLR 261 (295)
Q Consensus 202 ~~~n~---~---~~~~l~~I~~ia~~~~~~vivD~a~~~g-~~--------~~~~~~~~-----~~~~D~~~~s~~K~l~ 261 (295)
.-++| | ....++++.++|++||+.++.|+|..+. .. ..+..... +..+|.+++|+.|.++
T Consensus 190 tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~slsKglg 269 (467)
T TIGR02617 190 TITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLAMSAKKDAM 269 (467)
T ss_pred eEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEEEEcCCCCC
Confidence 32222 4 4555678899999999999999996553 21 22222111 2469999999999999
Q ss_pred CCceEEEEEeCC---chhhhccCCeeEEEeE
Q 022564 262 GPRGAMIFFRKG---VKEINKQGKEFTCRCF 289 (295)
Q Consensus 262 gp~gG~l~~~~~---~~~~~~~~~~~~~~~~ 289 (295)
.|-||+|+++++ -.-..-+.+.+.|.+|
T Consensus 270 ApvGg~Lag~d~~~~~l~~~~~~~~i~~EGf 300 (467)
T TIGR02617 270 VPMGGLLCFKDDSFFDVYTECRTLCVVQEGF 300 (467)
T ss_pred CcccceEEecchhHHHHHHHHHhhcccccCC
Confidence 999999999998 2223345678888887
No 276
>PRK07505 hypothetical protein; Provisional
Probab=99.44 E-value=5.8e-12 Score=116.17 Aligned_cols=203 Identities=13% Similarity=0.106 Sum_probs=121.3
Q ss_pred cCceecCCCCC---CCHHHHHHHhhhhhccCC-CCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCCh
Q 022564 47 KGLELIPSENF---TSVSVMQAVGSVMTNKYS-EGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 122 (295)
Q Consensus 47 ~~i~L~~~~~~---~~~~v~~al~~~l~~~~~-~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~ 122 (295)
..+++...... .+|++++++.+.+.. +. .+...... ....+...++++.++++++. + .+++++|+
T Consensus 47 ~~ld~~s~~~lgl~~~p~v~~A~~~~l~~-~g~~~~~~~~~----~~~~~~~~~l~~~la~~~~~--~----~~~~~sG~ 115 (402)
T PRK07505 47 TFVNFVSCSYLGLDTHPAIIEGAVDALKR-TGSLHLSSSRT----RVRSQILKDLEEALSELFGA--S----VLTFTSCS 115 (402)
T ss_pred eEEEeecCCccCCCCCHHHHHHHHHHHHH-hCCCCCCccch----hhhhHHHHHHHHHHHHHhCC--C----EEEECChH
Confidence 34666544333 289999999998865 31 01111110 11234455577899999987 3 78899998
Q ss_pred HHHHHHHHhh----cCCCC-eEEEec-CCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCC
Q 022564 123 PSNFQVYTAL----LKPHD-RIMALD-LPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRP 196 (295)
Q Consensus 123 ~a~~~~~~al----~~~gd-~Vl~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~t 196 (295)
+++..++..+ ..+|+ .|++.+ ..|++... .. .....+..+ +.++. .|++++++++++ ++
T Consensus 116 ~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~-~~-----~~~~~~~~v--~~~~~------~d~~~l~~~~~~-~~ 180 (402)
T PRK07505 116 AAHLGILPLLASGHLTGGVPPHMVFDKNAHASLNI-LK-----GICADETEV--ETIDH------NDLDALEDICKT-NK 180 (402)
T ss_pred HHHHHHHHHHHhcccCCCCCCEEEEchhhhHhHHh-hh-----hhhhcCCeE--EEeCC------CCHHHHHHHHhc-CC
Confidence 8776555332 22233 244444 44443311 11 111112222 32222 389999999876 67
Q ss_pred cEEEEcCCCC--CCccCHHHHHHHHHHcCCEEEEEccccccccc-cCC----CCCC--CCcceEEEeCCCCCCCCCceEE
Q 022564 197 KLIVAGASAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVA-AGV----IPSP--FEYADVVTTTTHKSLRGPRGAM 267 (295)
Q Consensus 197 k~i~l~~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~-~~~----~~~~--~~~~D~~~~s~~K~l~gp~gG~ 267 (295)
++++++.+++ |...++++|.++|++||+++|+|++|+.+.+. .+. ...+ .....+++.|+.|.++++ ||+
T Consensus 181 ~~~vl~~p~~~~G~~~~~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~-Gg~ 259 (402)
T PRK07505 181 TVAYVADGVYSMGGIAPVKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGAS-GGV 259 (402)
T ss_pred CEEEEEecccccCCcCCHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhcc-CeE
Confidence 8888875555 47889999999999999999999998653221 110 1111 112457788999998654 677
Q ss_pred EEE-eCCchh
Q 022564 268 IFF-RKGVKE 276 (295)
Q Consensus 268 l~~-~~~~~~ 276 (295)
+++ ++++.+
T Consensus 260 ~~~~~~~~~~ 269 (402)
T PRK07505 260 IMLGDAEQIE 269 (402)
T ss_pred EEeCCHHHHH
Confidence 765 445544
No 277
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.43 E-value=6.5e-12 Score=110.72 Aligned_cols=178 Identities=13% Similarity=0.081 Sum_probs=125.8
Q ss_pred ccCCcchHHHHHHHHHHHHHHHcCC----CCCCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCcccccc
Q 022564 83 YYGGNEYIDMAESLCQKRALEAFRL----DPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTD 157 (295)
Q Consensus 83 ~~~~~~~~~~l~~~~~~~la~~~g~----~~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~ 157 (295)
.|...+++..+++++.+.+.+.-|. +|+ ++++++|++ ++.++...+.+|||.-|++.|-|+++-....
T Consensus 116 ~fqdy~Gl~~frqa~A~Fm~~~r~~~v~fdP~----~~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~gfdrdl~--- 188 (471)
T KOG0256|consen 116 MFQDYHGLPSFRQAVAEFMERARGNRVKFDPE----RVVVTNGATSANETLMFCLADPGDAFLVPTPYYPGFDRDLR--- 188 (471)
T ss_pred hcccccCchHHHHHHHHHHHHHhCCCCccCcc----ceEEecccchhhHHHHHHhcCCCceeeecCCCCCcccccce---
Confidence 4556677888998888888877664 675 799999999 8887777889999999999988877743221
Q ss_pred ccccccceeeeEEEeeecCC-CCCCCCHHHHHHHHhh-----cCCcEEEEc-CCCC-C---CccCHHHHHHHHHHcCCEE
Q 022564 158 TKKISAVSIFFETMPYRLNE-STGYIDYDQLEKSATL-----FRPKLIVAG-ASAY-A---RLYDYERIRKVCNKQKAIM 226 (295)
Q Consensus 158 ~~~~~~~g~~~~~v~~~~~~-~~~~id~e~l~~~i~~-----~~tk~i~l~-~~n~-~---~~~~l~~I~~ia~~~~~~v 226 (295)
...| ++++|+.++. ++++++++++|+++++ .+.|.|+++ ++|+ | ....+..+.++|.++++-+
T Consensus 189 ----~rTg--veivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHv 262 (471)
T KOG0256|consen 189 ----WRTG--VEIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHV 262 (471)
T ss_pred ----eccC--ceEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEE
Confidence 2345 4445555543 4569999999998863 367888886 5555 4 4455778888999999999
Q ss_pred EEEccccccccccCCC-------CCC--CCcceEEEeCCCCCCCCCce--EEEEEeCC
Q 022564 227 LADMAHISGLVAAGVI-------PSP--FEYADVVTTTTHKSLRGPRG--AMIFFRKG 273 (295)
Q Consensus 227 ivD~a~~~g~~~~~~~-------~~~--~~~~D~~~~s~~K~l~gp~g--G~l~~~~~ 273 (295)
|+|+..+...+..... ..+ -...--++.|.+|-|+-|.= |+++..++
T Consensus 263 I~DEIya~sVF~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~ne 320 (471)
T KOG0256|consen 263 ISDEIYAGSVFDKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNE 320 (471)
T ss_pred EeehhhcccccCccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecCh
Confidence 9999954433322110 011 00122578999998854433 99999876
No 278
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.42 E-value=6.1e-13 Score=118.39 Aligned_cols=229 Identities=18% Similarity=0.162 Sum_probs=155.0
Q ss_pred ccCcccccCHHHHHHHHHHHHHHHc----------Cceec--------CCCCCCCHHHHHHHhhhhhccCCCCCCCCccc
Q 022564 23 LNAPLEVVDPEIADIIEHEKARQWK----------GLELI--------PSENFTSVSVMQAVGSVMTNKYSEGYPGARYY 84 (295)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~----------~i~L~--------~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~ 84 (295)
|++.+..+|....+.+++.....+. .+||. .+..+..+.+.+++.+.-. ...+++..
T Consensus 103 ~~RPi~~VPG~~v~l~dR~S~D~n~tfk~tG~~~~~lNlgSYNYLGFa~~~g~ca~~~~~~~~kygl-----~~css~~e 177 (519)
T KOG1357|consen 103 FERPICSVPGAWVDLMDRVSDDYNWTFKYTGTRSRCLNLGSYNYLGFAQSVGPCAEASLKSFDKYGL-----SRCSSRHE 177 (519)
T ss_pred hcCCCcCCCCceEEeeeeeccCCCceEEeccceeeeeeecccccccccccCCcCChHHHHHHHHhcc-----cccccchh
Confidence 4556666677666666664433222 24442 2233456777777765321 22222222
Q ss_pred CCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccc
Q 022564 85 GGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAV 164 (295)
Q Consensus 85 ~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~ 164 (295)
.+. .++..++.+.+++++|++. .++|..|-..|.+.+.+++.||..|+.....|.+... ++++.
T Consensus 178 ~G~---~~~hkelE~l~A~f~g~e~-----a~vF~mGf~TNs~~~p~l~~~gsLIiSDelNHaSi~~--------GaRLS 241 (519)
T KOG1357|consen 178 AGT---TEEHKELEELVARFLGVED-----AIVFSMGFATNSMNIPSLLGKGSLIISDELNHASLIT--------GARLS 241 (519)
T ss_pred ccc---HHHHHHHHHHHHHhcCCcc-----eEEEeccccccccCcceeecCCcceeeccccchheec--------ccccc
Confidence 222 2333445589999999986 7999999887887889999999999999988888755 66788
Q ss_pred eeeeEEEeeecCCCCCCCCHHHHHHHHhh------cCC-----cEEEE--c-CCCCCCccCHHHHHHHHHHcCCEEEEEc
Q 022564 165 SIFFETMPYRLNESTGYIDYDQLEKSATL------FRP-----KLIVA--G-ASAYARLYDYERIRKVCNKQKAIMLADM 230 (295)
Q Consensus 165 g~~~~~v~~~~~~~~~~id~e~l~~~i~~------~~t-----k~i~l--~-~~n~~~~~~l~~I~~ia~~~~~~vivD~ 230 (295)
|+..++.. .+ |.++||+.+++ ++| |++++ + .+.-+.+.++.++.++++++.++++.|+
T Consensus 242 gAtiRVfk--HN------dm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~Lp~vvalkkkykayl~lDE 313 (519)
T KOG1357|consen 242 GATTRVFR--HN------DMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVDLPEVVALKKKYKAYLYLDE 313 (519)
T ss_pred CceEEEEe--cC------CHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCeecccHHHHHhhccccEEEEeec
Confidence 87765543 22 56677776653 122 34444 2 5566799999999999999999999999
Q ss_pred ccccccccc-C--CCC-CCC--CcceEEEeCCCCCCCCCceEEEEEeCCchhhhccC
Q 022564 231 AHISGLVAA-G--VIP-SPF--EYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQG 281 (295)
Q Consensus 231 a~~~g~~~~-~--~~~-~~~--~~~D~~~~s~~K~l~gp~gG~l~~~~~~~~~~~~~ 281 (295)
||+.|++.. + +.. .+. ..+|++++.+.|.| |-.||++.+++++.+..+.-
T Consensus 314 AHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSf-ga~GGyiagsk~lid~lrt~ 369 (519)
T KOG1357|consen 314 AHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSF-GAAGGYIAGSKELIDYLRTP 369 (519)
T ss_pred cccccccCCCCcceeeccCCCchhheeecceehhhc-ccccceecCcHHHHhhhccC
Confidence 999998843 2 111 111 14899999999976 56889999999988765443
No 279
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.41 E-value=1.3e-12 Score=121.15 Aligned_cols=165 Identities=23% Similarity=0.258 Sum_probs=126.9
Q ss_pred HHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeee
Q 022564 96 LCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYR 174 (295)
Q Consensus 96 ~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 174 (295)
++++..++.||++. ..++++|++ +|..++++++.+||.||+....|-|... ++-++|+...++.-.
T Consensus 74 eAqe~aA~~fgAd~-----tyFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~~--------glilaGa~Pvyl~p~ 140 (557)
T COG1982 74 EAQELAARVFGADH-----TYFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIHH--------GLILAGATPVYLEPS 140 (557)
T ss_pred HHHHHHHHHhCCCc-----eEEEECCccHHHHHHHHhhcCCCCEEEecCCccHHHHH--------HHHHcCCceEEecCC
Confidence 35689999999988 678889999 9999999999999999999999988754 333566554433322
Q ss_pred cCCC---CCCCCHHHHHHHHhhc-CC-cEEEEcCCCC-CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCC-C-
Q 022564 175 LNES---TGYIDYDQLEKSATLF-RP-KLIVAGASAY-ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP-F- 246 (295)
Q Consensus 175 ~~~~---~~~id~e~l~~~i~~~-~t-k~i~l~~~n~-~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~-~- 246 (295)
.++. -+.++.+.+++.+.++ .. |+++++++++ |...++++|.++++.+++|+.+|++|.+.....+..+.. .
T Consensus 141 ~np~~gi~ggI~~~~~~~~l~~~~~~~k~~vitnpTYdGv~~n~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~~~~~~ 220 (557)
T COG1982 141 RNPLYGIIGGIPLETFKEALLAHPDAEKLAVITNPTYDGVCYNLRKIVELLHHYGAWVLYDEAHPAHFDFSPMLPESALN 220 (557)
T ss_pred CCccccccCCCCHHHHHHHHHhChhhheeEEEecCccceEeecHHHHHHHHhhcCceEEhhhcCcccccccccCcchhhh
Confidence 2221 1478999999987653 34 7788887777 899999999999999999999999998765555443322 1
Q ss_pred CcceEEEeCCCCCCCCCce-EEEEEeCC
Q 022564 247 EYADVVTTTTHKSLRGPRG-AMIFFRKG 273 (295)
Q Consensus 247 ~~~D~~~~s~~K~l~gp~g-G~l~~~~~ 273 (295)
.++|+++-|.||.+++-.- .+|.+++.
T Consensus 221 ~~~~~~tqS~HK~l~alSQaS~iHv~~~ 248 (557)
T COG1982 221 GGADFVTQSTHKLLAALSQASMIHVKDG 248 (557)
T ss_pred cCceEEEechhhhhhhhhhhHHHhhCCC
Confidence 3699999999999987655 88877763
No 280
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.40 E-value=8.6e-12 Score=115.27 Aligned_cols=213 Identities=12% Similarity=0.102 Sum_probs=127.1
Q ss_pred cCceecCCCC-----CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCC
Q 022564 47 KGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSG 121 (295)
Q Consensus 47 ~~i~L~~~~~-----~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG 121 (295)
+.|++..+.+ ..+|.+.+++.+.+.... .++.. ....++..++.+.++++++.+.+ .+++++|
T Consensus 37 ~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~--~~~~~------~~~~~~~~~l~~~l~~~~~~~~~----~v~~~~s 104 (413)
T cd00610 37 RYLDFLSGIGVLNLGHNHPEVVEALKEQLAKLT--HFSLG------FFYNEPAVELAELLLALTPEGLD----KVFFVNS 104 (413)
T ss_pred EEEEcCccHHhhccCCCCHHHHHHHHHHHHhCc--CccCc------ccCCHHHHHHHHHHHHhCCCCCC----EEEEcCc
Confidence 4577765422 257899999999885411 11111 01124445567899999987555 6777777
Q ss_pred hH-HHHHHHHhh--cCCCCeEEEecCCCCcccCccccccc-----cccccceeeeEEEeeecCC-----CCCCCCHHHHH
Q 022564 122 SP-SNFQVYTAL--LKPHDRIMALDLPHGGHLSHGYQTDT-----KKISAVSIFFETMPYRLNE-----STGYIDYDQLE 188 (295)
Q Consensus 122 ~~-a~~~~~~al--~~~gd~Vl~~~~~~~~~~~~~~~~~~-----~~~~~~g~~~~~v~~~~~~-----~~~~id~e~l~ 188 (295)
++ |+.+++..+ ..++++|++.++.|.+.......... .........+..++ .+. +++..|+++++
T Consensus 105 gsea~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~d~~~l~ 182 (413)
T cd00610 105 GTEAVEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVP--YPYRYRPPAELADDLEALE 182 (413)
T ss_pred HHHHHHHHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeC--CCccccchhhHHHHHHHHH
Confidence 77 888777766 36889999999877765322211100 00000111122232 221 12344899999
Q ss_pred HHHhh--cCCcEEEEcCCCC--CCccC----HHHHHHHHHHcCCEEEEEccccccccccCC----CCCCCCcceEEEeCC
Q 022564 189 KSATL--FRPKLIVAGASAY--ARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGV----IPSPFEYADVVTTTT 256 (295)
Q Consensus 189 ~~i~~--~~tk~i~l~~~n~--~~~~~----l~~I~~ia~~~~~~vivD~a~~~g~~~~~~----~~~~~~~~D~~~~s~ 256 (295)
+.+++ .+++++++.+.++ |...+ +++|.++|++||+++|+|++|+ |....+. ...+ ...|++++
T Consensus 183 ~~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~-g~g~~g~~~~~~~~~-~~~d~~t~-- 258 (413)
T cd00610 183 EALEEHPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQT-GFGRTGKMFAFEHFG-VEPDIVTL-- 258 (413)
T ss_pred HHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCcchhhHhhcC-CCCCeEEE--
Confidence 98875 2456666653332 44555 9999999999999999999986 2211111 1111 02566644
Q ss_pred CCCCCCCce-EEEEEeCCchhh
Q 022564 257 HKSLRGPRG-AMIFFRKGVKEI 277 (295)
Q Consensus 257 ~K~l~gp~g-G~l~~~~~~~~~ 277 (295)
.|+++++-. |++++++++.+.
T Consensus 259 sK~l~~g~~~g~~~~~~~~~~~ 280 (413)
T cd00610 259 GKGLGGGLPLGAVLGREEIMDA 280 (413)
T ss_pred cccccCccccEEEEEcHHHHHh
Confidence 599976433 888888876654
No 281
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.38 E-value=5.5e-12 Score=110.80 Aligned_cols=192 Identities=20% Similarity=0.207 Sum_probs=136.5
Q ss_pred CHHHHHHHhhhhhccCCCCCCCCcccCCcch-HHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhh--cCC
Q 022564 59 SVSVMQAVGSVMTNKYSEGYPGARYYGGNEY-IDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTAL--LKP 135 (295)
Q Consensus 59 ~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~-~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al--~~~ 135 (295)
.|+|.+||.+.+.. +..|-.+.+.-.+... ... +.+.++++.+.+. .++|+|+--||.+.+..+ .-|
T Consensus 187 Hp~V~~A~~~tl~~-hG~GAGGTRNIsG~s~~hv~----LE~eLA~LHqK~a-----ALlFsSCfVANDstLftLak~lp 256 (570)
T KOG1360|consen 187 HPEVLDAMHDTLDR-HGAGAGGTRNISGHSKHHVR----LEAELADLHQKEA-----ALLFSSCFVANDSTLFTLAKKLP 256 (570)
T ss_pred ChHHHHHHHHHHHH-cCCCcCCccccCCCCchhhh----HHHHHHHHhcCcc-----eeeeeeeeeccchHHHHHHHHCC
Confidence 68999999999976 4444444443333322 233 4488899888776 688988888888777777 459
Q ss_pred CCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhh---cCCcEEEEc--CCCCCCcc
Q 022564 136 HDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL---FRPKLIVAG--ASAYARLY 210 (295)
Q Consensus 136 gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~---~~tk~i~l~--~~n~~~~~ 210 (295)
|.+|+.....|.+.+. +++-.+.. +.+. . .-|+++|+++++. ..||+|-+- .+..|.+.
T Consensus 257 gcei~SD~gNHASMI~--------GIrns~v~-K~IF-r------HND~~hL~~lL~~~~~svPKivAFEtVhSM~Gavc 320 (570)
T KOG1360|consen 257 GCEIFSDEGNHASMIQ--------GIRNSRVP-KHIF-R------HNDLDHLEQLLQSSPKSVPKIVAFETVHSMDGAVC 320 (570)
T ss_pred CcEEeccccchHHHHH--------HhhhcCCc-ceee-c------cCCHHHHHHHHHhCCCCCCceEEEeeeeccCCCcC
Confidence 9999877766665543 33333321 1121 1 2388999988864 247888884 56668999
Q ss_pred CHHHHHHHHHHcCCEEEEEcccccccccc---CC--CCCCCCcceEEEeCCCCCCCCCceEEEEEeCCchhh
Q 022564 211 DYERIRKVCNKQKAIMLADMAHISGLVAA---GV--IPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEI 277 (295)
Q Consensus 211 ~l~~I~~ia~~~~~~vivD~a~~~g~~~~---~~--~~~~~~~~D~~~~s~~K~l~gp~gG~l~~~~~~~~~ 277 (295)
|+++|+++|++||++.++|+.|+.|.... ++ .+.-+...|++++...|.| |--||++.....+.|.
T Consensus 321 pleelcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgKaf-GcVGGYIAat~~LvDm 391 (570)
T KOG1360|consen 321 PLEELCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGKAF-GCVGGYIAATRKLVDM 391 (570)
T ss_pred CHHHHHHHHHHhCceeeeehhhhhccccCCCCCccccCCcchhhhhcccchhhhc-ccccceehhhhhHHHH
Confidence 99999999999999999999999987653 12 1111225999999999987 6788999988886654
No 282
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.36 E-value=7.7e-12 Score=112.43 Aligned_cols=207 Identities=14% Similarity=0.078 Sum_probs=131.6
Q ss_pred CceecCCCCCCCHHHHHHHhhhhhccCCCC--CCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCC-hH-
Q 022564 48 GLELIPSENFTSVSVMQAVGSVMTNKYSEG--YPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSG-SP- 123 (295)
Q Consensus 48 ~i~L~~~~~~~~~~v~~al~~~l~~~~~~g--~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG-~~- 123 (295)
.+|+++|....|++|++++.+.+.+....| ...-.+ .+....++.+.+++.++++++++.+. .|++..| ++
T Consensus 5 ~~nF~aGPa~lp~~Vl~~~~~~~~~~~~~g~si~eisH--Rs~~F~~i~~~~~~~Lr~Ll~~P~~y---~Vlfl~GggT~ 79 (364)
T PRK12462 5 QLNFSGGPGALPDTVLEQVRQAVVELPETGLSVLGMSH--RSSWFSSLLAQAEADLRDLLGIPDEY---GVVFLQGGSSL 79 (364)
T ss_pred cceecCCCcCCCHHHHHHHHHHHhcccccCcccccccc--ccHHHHHHHHHHHHHHHHHhCCCCCC---eEEEEeccHHH
Confidence 578899999999999999998887632222 111112 22445677778889999999995432 4555444 45
Q ss_pred HHHHHHHhhcCCCCeEE-EecCCCCcccCccccccccccccceeeeEEEeeecC-CCCCCCCHHHHHHHHhhcCCcEEEE
Q 022564 124 SNFQVYTALLKPHDRIM-ALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN-ESTGYIDYDQLEKSATLFRPKLIVA 201 (295)
Q Consensus 124 a~~~~~~al~~~gd~Vl-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~~~id~e~l~~~i~~~~tk~i~l 201 (295)
++.++...++.+||+++ +.. .+.++..+ . +.+...| .+..+..... .-+..++++++ .+.+ +.+.|.+
T Consensus 80 ~~ea~~~Nll~~g~~~~~~~~---tG~fg~r~--~-~ea~~~g-~v~~~~~~~~~~~~~~p~~~~~--~~~~-d~~~v~~ 149 (364)
T PRK12462 80 QFSMIPMNFSRPGAAAPEYVT---TGYWSRKA--I-GEASRVA-AMRVVWDGAASGYRTLPSLAEL--DWDA-RAPFRHY 149 (364)
T ss_pred HHHHHHHHcCCCCCcEEEEEe---CCHHHHHH--H-HHHHhcC-CceEecCcCCCCCCcCCCHHHh--ccCC-CCcEEEE
Confidence 88888999999999765 443 22222111 1 1122223 2332321111 01135566665 2323 5677777
Q ss_pred c--CCCCCCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCce-EEEEEeCCchhhh
Q 022564 202 G--ASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEIN 278 (295)
Q Consensus 202 ~--~~n~~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~~ 278 (295)
+ .+..|...+ ++.+.+++++++|++..++..+.+... .|++.++.+|+|+ |.| ++++++++..+..
T Consensus 150 t~NETstGv~~~-----~~~~~~~~llvvD~sS~~~s~pid~~~-----~dvi~agsQKnlg-P~Gltvvivs~~al~~~ 218 (364)
T PRK12462 150 VSNETVEGLQFP-----DAAGLPDSPLIADMSSDFMSRPFDVEA-----YGMVYAHAQKNLG-PAGVTVAIIRRALLERV 218 (364)
T ss_pred ccCCCCceEecC-----cccccCCCeEEEEcCchhhCCCCChHH-----ccEEEeeccccCC-CCceEEEEECHHHHhhc
Confidence 6 333355554 333446999999999888877766654 5899999999996 999 9999999987655
Q ss_pred cc
Q 022564 279 KQ 280 (295)
Q Consensus 279 ~~ 280 (295)
.+
T Consensus 219 ~~ 220 (364)
T PRK12462 219 PD 220 (364)
T ss_pred cc
Confidence 43
No 283
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=99.36 E-value=1.4e-11 Score=104.58 Aligned_cols=173 Identities=17% Similarity=0.219 Sum_probs=119.9
Q ss_pred HHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCcccccccc---ccccceeeeEEEee
Q 022564 97 CQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTK---KISAVSIFFETMPY 173 (295)
Q Consensus 97 ~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~---~~~~~g~~~~~v~~ 173 (295)
+.+-+++.||.+... |...+.||+.|+..++.++++|||+.+...-.-...+.-...+... ...-.|.+++.+++
T Consensus 70 Le~vyA~vf~aE~a~--VRpq~isGTHAI~~aLfg~LRpgDell~i~G~PYDTLeevIG~rg~~~gSL~dfgi~Y~~v~L 147 (416)
T COG4100 70 LERVYAQVFGAEAAL--VRPQIISGTHAIACALFGILRPGDELLYITGSPYDTLEEVIGLRGEGQGSLKDFGIKYKAVPL 147 (416)
T ss_pred HHHHHHHHhccccce--eeeeeecchhHHHHHHHhccCCCCeEEEecCCcchhHHHHhccCCCCcccHHHhCcceeeccc
Confidence 348899999997764 6888999999988899999999999987653221111111000000 11223445555654
Q ss_pred ecCCCCCCCCHHHHHHHHhhcCCcEEEEc-CCCC---C--CccCHHHHHHHHHHc--CCEEEEEccccccccccCCCCCC
Q 022564 174 RLNESTGYIDYDQLEKSATLFRPKLIVAG-ASAY---A--RLYDYERIRKVCNKQ--KAIMLADMAHISGLVAAGVIPSP 245 (295)
Q Consensus 174 ~~~~~~~~id~e~l~~~i~~~~tk~i~l~-~~n~---~--~~~~l~~I~~ia~~~--~~~vivD~a~~~g~~~~~~~~~~ 245 (295)
. .++.+|++.+.+.+++ +||+|.+. +..+ | .+.+++++.++.|+. ++++++|++.+ -+.-...+..
T Consensus 148 --t-~~gkiD~~~v~~~i~~-~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYG--EFvE~~EPt~ 221 (416)
T COG4100 148 --T-ADGKIDIQAVKTAISD-RTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCYG--EFVEEKEPTH 221 (416)
T ss_pred --c-cCCcccHHHHHHhcCc-cceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccch--hhhhccCccc
Confidence 3 4689999999999997 99999994 3333 3 566777888888875 78999999953 3332333211
Q ss_pred CCcceEEEeCCCCCCCCC---ceEEEEEeCCchhhh
Q 022564 246 FEYADVVTTTTHKSLRGP---RGAMIFFRKGVKEIN 278 (295)
Q Consensus 246 ~~~~D~~~~s~~K~l~gp---~gG~l~~~~~~~~~~ 278 (295)
.|+|++.+|.-|+-+|. .||++.+|.++-+..
T Consensus 222 -vGaDliAGSLIKNpGGgiaktGGYiaGk~~~ve~~ 256 (416)
T COG4100 222 -VGADLIAGSLIKNPGGGIAKTGGYIAGKAELVEAA 256 (416)
T ss_pred -cchhhhccceeeCCCCceeeccceeechHHHHHhh
Confidence 26999999999998764 469999999876543
No 284
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.33 E-value=7.3e-11 Score=108.80 Aligned_cols=193 Identities=15% Similarity=0.120 Sum_probs=116.1
Q ss_pred CHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcC----
Q 022564 59 SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLK---- 134 (295)
Q Consensus 59 ~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~---- 134 (295)
.|++.+++.+.+.+ +..+.. .+ .++ ...++.+.++++++.+. .+++.||+.|+..++..+..
T Consensus 59 ~~~i~~a~~~~~~~-~~~~~~---~~-~~~----~~~~l~~~l~~~~~~~~-----~~~~~SGs~A~e~al~~a~~~~~~ 124 (401)
T PRK00854 59 HPKILAAMVEQAGR-LTLTSR---AF-RND----QLAPLYEELAALTGSHK-----VLPMNSGAEAVETAIKAVRKWGYE 124 (401)
T ss_pred CHHHHHHHHHHHhh-cccccc---cc-CCH----HHHHHHHHHHhhCCCCE-----EEEeCCcHHHHHHHHHHHHHHHHh
Confidence 78999999998876 321111 11 112 22335577888887642 67777888888877776631
Q ss_pred -----CC-CeEEEecCCCCcccCccccccccc-----cccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcC
Q 022564 135 -----PH-DRIMALDLPHGGHLSHGYQTDTKK-----ISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGA 203 (295)
Q Consensus 135 -----~g-d~Vl~~~~~~~~~~~~~~~~~~~~-----~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~ 203 (295)
+| ++|+++...|.+............ .......+..++ -.|++++++.+.+ ++++|++.+
T Consensus 125 ~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~d~~~le~~i~~-~~~aii~e~ 195 (401)
T PRK00854 125 VKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVP--------FGDAEALEAAITP-NTVAFLVEP 195 (401)
T ss_pred ccCCCCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeC--------CCCHHHHHHHhCC-CeEEEEEcc
Confidence 23 678888765544321111000000 000000111111 1489999999976 899999974
Q ss_pred CCC--CCccC----HHHHHHHHHHcCCEEEEEccccccccccCC----CCCCCCcceEEEeCCCCCCCCC--ceEEEEEe
Q 022564 204 SAY--ARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGV----IPSPFEYADVVTTTTHKSLRGP--RGAMIFFR 271 (295)
Q Consensus 204 ~n~--~~~~~----l~~I~~ia~~~~~~vivD~a~~~g~~~~~~----~~~~~~~~D~~~~s~~K~l~gp--~gG~l~~~ 271 (295)
+++ |...| +++|.++|++||+++|+|++|+ |....+. ...+ ...|+++++ |+|+|. +.|+++++
T Consensus 196 ~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~-g~g~~g~~~~~~~~g-~~~D~~~~~--K~l~gg~~~ig~v~~~ 271 (401)
T PRK00854 196 IQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQT-GLGRTGKLLAEEHEG-IEADVTLIG--KALSGGFYPVSAVLSN 271 (401)
T ss_pred ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-CCCCCchHhHHhhcC-CCCCEEEec--ccccCCccCeEEEEEc
Confidence 444 34444 9999999999999999999996 3222221 1111 126888774 998654 46889998
Q ss_pred CCchhhh
Q 022564 272 KGVKEIN 278 (295)
Q Consensus 272 ~~~~~~~ 278 (295)
+++.+..
T Consensus 272 ~~~~~~l 278 (401)
T PRK00854 272 SEVLGVL 278 (401)
T ss_pred HHHHhcc
Confidence 8866543
No 285
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.30 E-value=2.3e-11 Score=110.33 Aligned_cols=195 Identities=8% Similarity=0.014 Sum_probs=126.0
Q ss_pred ecCCCCCCCHH-HHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHH
Q 022564 51 LIPSENFTSVS-VMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQV 128 (295)
Q Consensus 51 L~~~~~~~~~~-v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~ 128 (295)
+.+|....-|. ..+++.+.+-... + .++...++.+++.+.++++++.+.+ +.+ ++++++++ ++.++
T Consensus 7 f~~gp~~~~~~~~~~~~~~~~~~~~--------H--Rs~~F~~i~~e~~~~L~~l~~~~~~-~~v-~~l~GsGT~a~Eaa 74 (374)
T TIGR01365 7 FSSGPCAKRPGWSIEELKNAPLGRS--------H--RSKLGKEKLAEAIKKTREMLGVPAD-YLI-GIVPASDTGAVEMA 74 (374)
T ss_pred cCCCccCCCchhhHHHHhhhhcccC--------c--CCHHHHHHHHHHHHHHHHHhCCCCC-cEE-EEECCchHHHHHHH
Confidence 44555544444 6666665432211 1 1245567777888999999998533 212 33344444 88889
Q ss_pred HHhhc-CCCCeEEEecCCCCcccCcccccccccccccee-eeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEE-cCCC
Q 022564 129 YTALL-KPHDRIMALDLPHGGHLSHGYQTDTKKISAVSI-FFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASA 205 (295)
Q Consensus 129 ~~al~-~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l-~~~n 205 (295)
+..++ ++||+|++.. .++ ..+....++..|. .+..+..+ -+..+|+++++. +..+.+. +.+.
T Consensus 75 ~~nl~~~~g~~vLv~g-----~FG--~r~~~eia~~~g~~~v~~l~~~---~g~~~~~~~ve~-----~~~v~~vhnETS 139 (374)
T TIGR01365 75 LWSMLGCRGVDVLAWE-----SFG--KGWVTDVTKQLKLPDVRVLEAE---YGKLPDLKKVDF-----KNDVVFTWNGTT 139 (374)
T ss_pred HHHcCCCCCCeEEEEC-----HHH--HHHHHHHHHhcCCCCcEEEcCC---CCCCCCHHHcCC-----CCCEEEecCCCc
Confidence 99998 5899999753 221 1111123344555 24444322 234789999872 2223333 3566
Q ss_pred CCCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCce-EEEEEeCCchhhhc
Q 022564 206 YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINK 279 (295)
Q Consensus 206 ~~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~~~ 279 (295)
.|...|+++|...+ +++++++|+..++|..+.+.. ++|+++++.+|+|++|+| ++++++++..+...
T Consensus 140 TGv~npv~~i~~~~--~~~lliVDavSs~g~~~l~~d-----~iDv~~tgsQK~L~~ppGls~v~vs~~Al~~~~ 207 (374)
T TIGR01365 140 SGVRVPNGDFIPAD--REGLTICDATSAAFAQDLDYH-----KLDVVTFSWQKVLGGEGAHGMLILSPRAVARLE 207 (374)
T ss_pred hheecccccccccc--CCCcEEEEccchhcCCCCChh-----HCcEEEEechhccCCCCceEEEEECHHHHHHHh
Confidence 67888887655322 589999999999998887665 299999999999999999 99999999876544
No 286
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=99.30 E-value=9.4e-11 Score=102.86 Aligned_cols=197 Identities=16% Similarity=0.181 Sum_probs=132.2
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhhc-CC
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALL-KP 135 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al~-~~ 135 (295)
.|..+++.....|..-. |..++ |..+.+++-+++.+.+.+.+.=|.+.+ | ..|++|+|++ ++..++.-++ .+
T Consensus 87 fp~Dai~RA~~~L~~~g--Gs~Ga--YS~SqGv~~vR~~VA~~I~rRDG~p~~-p-~dI~LT~GAS~ai~~il~l~~~~~ 160 (475)
T KOG0258|consen 87 FPTDAIKRAKRILNDCG--GSLGA--YSDSQGVPGVRKHVAEFIERRDGIPAD-P-EDIFLTTGASPAIRSILSLLIAGK 160 (475)
T ss_pred CCHHHHHHHHHHHHhcC--Ccccc--cccccCChhHHHHHHHHHHhccCCCCC-H-HHeeecCCCcHHHHHHHHHHhcCC
Confidence 45556666666665522 33343 677788888998899999988885222 2 2799999999 7775666654 58
Q ss_pred CCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCC-CCCCCCHHHHHHHHhh----cCCcEEEE-cCCCCC--
Q 022564 136 HDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE-STGYIDYDQLEKSATL----FRPKLIVA-GASAYA-- 207 (295)
Q Consensus 136 gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~id~e~l~~~i~~----~~tk~i~l-~~~n~~-- 207 (295)
.+-|+++- |-|++|...+...|... +++-+|+ .+|.+|.++|++.+++ .+++++++ ++.|++
T Consensus 161 ~~GvliPi--------PQYPLYsAti~l~~~~~--v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGq 230 (475)
T KOG0258|consen 161 KTGVLIPI--------PQYPLYSATISLLGGTQ--VPYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQ 230 (475)
T ss_pred CCceEeec--------CCCchhHHHHHHhCCcc--cceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccch
Confidence 88999999 66666665555666443 5555664 4679999999998864 25666554 555553
Q ss_pred --CccCHHHHHHHHHHcCCEEEEEccccccccccCCC---------CCCCCcce----EEEeCCCCCC---CCCceEEEE
Q 022564 208 --RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI---------PSPFEYAD----VVTTTTHKSL---RGPRGAMIF 269 (295)
Q Consensus 208 --~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~---------~~~~~~~D----~~~~s~~K~l---~gp~gG~l~ 269 (295)
+...+++|..+|++++++++.|+.+--.....+.. ..+-.+.| +.+.|.||.+ +|++||++=
T Consensus 231 vls~e~ie~i~~fa~~~~l~llaDEVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmE 310 (475)
T KOG0258|consen 231 VLSEENIEGIICFAAEEGLVLLADEVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYME 310 (475)
T ss_pred hhcHHHHHHHHHHHHHcCeEEechHHHHhhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeee
Confidence 56789999999999999999999854333222200 00101122 4467788877 578888874
Q ss_pred E
Q 022564 270 F 270 (295)
Q Consensus 270 ~ 270 (295)
.
T Consensus 311 v 311 (475)
T KOG0258|consen 311 S 311 (475)
T ss_pred c
Confidence 3
No 287
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.29 E-value=2.5e-10 Score=97.20 Aligned_cols=224 Identities=12% Similarity=0.100 Sum_probs=138.4
Q ss_pred cCceecCCCCCCCHHHHHHHhhhhhccCCCC-CCC-CcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-
Q 022564 47 KGLELIPSENFTSVSVMQAVGSVMTNKYSEG-YPG-ARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP- 123 (295)
Q Consensus 47 ~~i~L~~~~~~~~~~v~~al~~~l~~~~~~g-~~~-~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~- 123 (295)
..|+|..|.+..-|++.+...+...+...++ +.. --.|.++++.+.+.+++...+.+.+|++-.. -+|.+|+|+.
T Consensus 31 g~imLggGNPa~iPem~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~~~ygwnit~--~NIalTnGSQs 108 (417)
T COG3977 31 GAIMLGGGNPARIPEMDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALAKMLRREYGWNITA--QNIALTNGSQS 108 (417)
T ss_pred CceeeCCCCcccChhHHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHHHHHHHHhCCCCcc--ceeeecCCccc
Confidence 5688888887777777777665443322222 110 0136777888888888989999999984332 1999999999
Q ss_pred HHHHHHHhhc---CCCC--eEEEe-cCCCCcccCcccccccccccccee-eeEEEe-eecCCC---CCCCCHHHHHHHHh
Q 022564 124 SNFQVYTALL---KPHD--RIMAL-DLPHGGHLSHGYQTDTKKISAVSI-FFETMP-YRLNES---TGYIDYDQLEKSAT 192 (295)
Q Consensus 124 a~~~~~~al~---~~gd--~Vl~~-~~~~~~~~~~~~~~~~~~~~~~g~-~~~~v~-~~~~~~---~~~id~e~l~~~i~ 192 (295)
+...++.-+. ..|+ +|+.+ .|+|-++-..+. .+- -+...| ++..+. .+.+|++++. +.
T Consensus 109 ~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l---------~~d~fVs~kP~iel~~~g~FKY~vDF~~l~--i~ 177 (417)
T COG3977 109 AFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGL---------EEDLFVSAKPNIELLPAGQFKYHVDFEHLH--IG 177 (417)
T ss_pred hHHHHHHHhcCccCCCcceeEeeccChhhcccccccc---------CccceeeccCCcccccccceeeccCHHHcc--cc
Confidence 7665555442 3454 45544 455544432211 110 011111 011111 1367888884 44
Q ss_pred hcCCcEEEEc-CCCCC----CccCHHHHHHHHHHcCCEEEEEccccccccccCC-CCCCCCc-ceEEEeCCCC-CCCCCc
Q 022564 193 LFRPKLIVAG-ASAYA----RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGV-IPSPFEY-ADVVTTTTHK-SLRGPR 264 (295)
Q Consensus 193 ~~~tk~i~l~-~~n~~----~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~-~~~~~~~-~D~~~~s~~K-~l~gp~ 264 (295)
+ ++.+|+++ ++|++ +-.++.+|.++|++||+++++|.|++...-.... ...++++ --+.|+|.+| .|+|-+
T Consensus 178 e-~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~PFP~iifsd~~~~w~~NiilC~SLSK~GLPG~R 256 (417)
T COG3977 178 E-STGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFPGIIFSDATPLWNENIILCMSLSKLGLPGSR 256 (417)
T ss_pred c-ccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCCCCceecccccccCCCCEEEEeehhhcCCCCcc
Confidence 4 78899988 55553 4456789999999999999999997654322211 1123332 4477999999 334444
Q ss_pred eEEEEEeCCchhhhccCCee
Q 022564 265 GAMIFFRKGVKEINKQGKEF 284 (295)
Q Consensus 265 gG~l~~~~~~~~~~~~~~~~ 284 (295)
-|+++.+.++....+..+.|
T Consensus 257 ~GIiIane~viqaitnmn~i 276 (417)
T COG3977 257 CGIIIANEKVIQAITNMNGI 276 (417)
T ss_pred eeEEEccHHHHHHHHhccce
Confidence 59999999988776665543
No 288
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.28 E-value=9.2e-11 Score=107.20 Aligned_cols=207 Identities=14% Similarity=0.147 Sum_probs=119.7
Q ss_pred cCceecCC--CC---CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCC
Q 022564 47 KGLELIPS--EN---FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSG 121 (295)
Q Consensus 47 ~~i~L~~~--~~---~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG 121 (295)
+.|++..+ .+ ..+|.+.+++.+.+.+.. .... .|. .....++++.+++++|.+ .+++++|
T Consensus 28 ~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~---~~~~-~~~-----~~~~~~l~~~la~~~g~~------~~~~~~s 92 (379)
T TIGR00707 28 EYLDFVAGIAVNSLGHAHPKLVEALKEQLEKLV---HVSN-LYY-----TEPQEELAEKLVEHSGAD------RVFFCNS 92 (379)
T ss_pred EEEEcCcchhhccCCCCCHHHHHHHHHHHhhcc---cccc-ccC-----CHHHHHHHHHHHhhCCCC------EEEEeCC
Confidence 45676553 22 346899999998887521 1111 111 233445668899999865 4555555
Q ss_pred hH-HHHHHHHhh---cC----CCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCC----CCHHHHHH
Q 022564 122 SP-SNFQVYTAL---LK----PHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGY----IDYDQLEK 189 (295)
Q Consensus 122 ~~-a~~~~~~al---~~----~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~----id~e~l~~ 189 (295)
++ ++..++..+ .. +||+|+++++.|.++............ .. ....+ +. .+.. .|++++++
T Consensus 93 g~~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~-~~---~~~~~--~~-~~~~~~~~~d~~~l~~ 165 (379)
T TIGR00707 93 GAEANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPK-YQ---KGFEP--LV-PGFSYAPYNDIESLKK 165 (379)
T ss_pred cHHHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChh-hh---ccCCC--CC-CCceeeCCCCHHHHHH
Confidence 55 777666644 22 479999999766554321110000000 00 00011 11 1111 18999999
Q ss_pred HHhhcCCcEEEEcCCCCC-C-----ccCHHHHHHHHHHcCCEEEEEccccccccccCC-CCC-CCC-cceEEEeCCCCCC
Q 022564 190 SATLFRPKLIVAGASAYA-R-----LYDYERIRKVCNKQKAIMLADMAHISGLVAAGV-IPS-PFE-YADVVTTTTHKSL 260 (295)
Q Consensus 190 ~i~~~~tk~i~l~~~n~~-~-----~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~-~~~-~~~-~~D~~~~s~~K~l 260 (295)
.+++ ++++|++++.+++ . ..++++|.++|++|++++|+|++|. +....+. ... ... ..|++ +++|++
T Consensus 166 ~~~~-~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~-~~~~~g~~~~~~~~~~~~d~~--t~sK~~ 241 (379)
T TIGR00707 166 AIDD-ETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQT-GIGRTGKFFAYEHYGIEPDII--TLAKGL 241 (379)
T ss_pred Hhhh-CeeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCccchhhhHHhcCCCCCEE--EEcccc
Confidence 9987 8999999754442 2 2247899999999999999999986 3222111 000 001 24655 468998
Q ss_pred CCC-ceEEEEEeCCchhhhc
Q 022564 261 RGP-RGAMIFFRKGVKEINK 279 (295)
Q Consensus 261 ~gp-~gG~l~~~~~~~~~~~ 279 (295)
++. +.|+++.++++.+...
T Consensus 242 ~~G~riG~~~~~~~~~~~~~ 261 (379)
T TIGR00707 242 GGGVPIGATLAKEEVAEAFT 261 (379)
T ss_pred cCCcccEEEEEcHHHHhhhc
Confidence 633 3499999887665443
No 289
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.26 E-value=2.1e-10 Score=105.65 Aligned_cols=196 Identities=14% Similarity=0.140 Sum_probs=114.8
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCC-CCCcceeEEeCCChH-HHHHHHHhhcCC
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLD-PEKWGVNVQSLSGSP-SNFQVYTALLKP 135 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~-~~~~~~~v~~~sG~~-a~~~~~~al~~~ 135 (295)
.+|++.+++.+.+.+ +. .... .|... ...++.++++++++.+ ++ .+++++|++ ++..++..+..+
T Consensus 60 ~~p~v~~ai~~~~~~-~~--~~~~-~~~~~-----~~~~la~~l~~~~~~~~~~----~v~~~~sgsea~~~al~~~~~~ 126 (398)
T PRK03244 60 AHPAVVEAVTRQLAT-LG--HVSN-LFATE-----PQIALAERLVELLGAPEGG----RVFFCNSGAEANEAAFKLARLT 126 (398)
T ss_pred CCHHHHHHHHHHHHh-cc--CccC-ccCCH-----HHHHHHHHHHHhCCCCCCC----EEEEeCchHHHHHHHHHHHHHH
Confidence 368999999988875 21 1111 12221 1123668888888854 34 788877777 888777766556
Q ss_pred C-CeEEEecCCCCcccCcccccc-----ccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCC--C
Q 022564 136 H-DRIMALDLPHGGHLSHGYQTD-----TKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY--A 207 (295)
Q Consensus 136 g-d~Vl~~~~~~~~~~~~~~~~~-----~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~--~ 207 (295)
| +.|+..+..|.+......... .......+..+..++ ..|++++++.+++ ++++|++.++++ |
T Consensus 127 g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~d~~~l~~~~~~-~~~aviiep~~~~~G 197 (398)
T PRK03244 127 GRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVP--------YGDVDALAAAVDD-DTAAVFLEPIQGEAG 197 (398)
T ss_pred CCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeC--------CCCHHHHHHhhcC-CeEEEEEecccCCCC
Confidence 5 567777666655521111000 000000000111111 1378999998865 889999874433 3
Q ss_pred CccC----HHHHHHHHHHcCCEEEEEccccccccccCC-CCCCCC--cceEEEeCCCCCCCCC-ceEEEEEeCCchhhh
Q 022564 208 RLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGV-IPSPFE--YADVVTTTTHKSLRGP-RGAMIFFRKGVKEIN 278 (295)
Q Consensus 208 ~~~~----l~~I~~ia~~~~~~vivD~a~~~g~~~~~~-~~~~~~--~~D~~~~s~~K~l~gp-~gG~l~~~~~~~~~~ 278 (295)
...| +++|.++|++||+++|+|++|+ |.-..+. ...... ..|++++ +|+|++. +-|++++++++.+..
T Consensus 198 ~~~~~~~~l~~l~~l~~~~~~llI~DEv~~-g~gr~g~~~~~~~~~~~pDi~t~--sK~l~~G~~ig~~~~~~~~~~~~ 273 (398)
T PRK03244 198 VVPPPAGYLAAAREITDRHGALLVLDEVQT-GIGRTGAWFAHQHDGVTPDVVTL--AKGLGGGLPIGACLAFGPAADLL 273 (398)
T ss_pred CcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCcccchHHhhhhhCCCCCEEEE--chhhhCCcccEEEEEcHHHHhhc
Confidence 4454 8899999999999999999985 3211110 000001 2677655 6999743 338888887765543
No 290
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.23 E-value=2.2e-10 Score=105.16 Aligned_cols=193 Identities=12% Similarity=0.102 Sum_probs=113.9
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhh----
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTAL---- 132 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al---- 132 (295)
-.|++.+++.+.+.+....+ . .+ .++ ...++.+.++++.+. + .++++++++ |+.+++.++
T Consensus 48 ~~p~v~~a~~~~~~~~~~~~---~-~~-~~~----~~~~la~~l~~~~~~--~----~v~~~~sGseA~~~al~~ar~~~ 112 (389)
T PRK01278 48 AHPHLVEALKEQAEKLWHVS---N-LY-RIP----EQERLAERLVENSFA--D----KVFFTNSGAEAVECAIKTARRYH 112 (389)
T ss_pred CCHHHHHHHHHHHHhcCccc---c-cc-CCh----HHHHHHHHHHhhCCC--C----EEEEcCCcHHHHHHHHHHHHHHH
Confidence 47899999999886522111 1 01 112 222345677776643 3 556655555 888776655
Q ss_pred cCCCC----eEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCC----CCCHHHHHHHHhhcCCcEEEEcCC
Q 022564 133 LKPHD----RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTG----YIDYDQLEKSATLFRPKLIVAGAS 204 (295)
Q Consensus 133 ~~~gd----~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~----~id~e~l~~~i~~~~tk~i~l~~~ 204 (295)
..+|| +|++++..|.+................+ + .+ .. +++ -.|++++++.+++ ++++|++.+.
T Consensus 113 ~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~--~--~~--~~-~~~~~~~~~d~~~l~~~l~~-~~~avivep~ 184 (389)
T PRK01278 113 YGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEG--F--GP--LV-PGFDQVPFGDIEALKAAITP-NTAAILIEPI 184 (389)
T ss_pred HhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhccc--C--CC--CC-CCceEeCCCCHHHHHHhhCC-CeEEEEEecc
Confidence 45676 8999998777664332211100000000 0 01 00 111 1589999999976 8999999754
Q ss_pred CCC------CccCHHHHHHHHHHcCCEEEEEccccccccccCC-C---CCCCCcceEEEeCCCCCCC-CCceEEEEEeCC
Q 022564 205 AYA------RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGV-I---PSPFEYADVVTTTTHKSLR-GPRGAMIFFRKG 273 (295)
Q Consensus 205 n~~------~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~-~---~~~~~~~D~~~~s~~K~l~-gp~gG~l~~~~~ 273 (295)
+++ ....+++|.++|++||+++|+|++|. |....+. . ...+ ..|++ +..|.++ |.+.|+++++++
T Consensus 185 ~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~g~~g~~~~~~~~~~-~pdi~--t~sK~l~~G~~ig~~~~~~~ 260 (389)
T PRK01278 185 QGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQC-GMGRTGKLFAHEWAGV-TPDIM--AVAKGIGGGFPLGACLATEE 260 (389)
T ss_pred cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCCcceeecccCC-CCCEE--EEehhccCCcceEEEEEcHH
Confidence 442 24478999999999999999999986 3322111 0 1111 24654 5689885 445688888877
Q ss_pred chhh
Q 022564 274 VKEI 277 (295)
Q Consensus 274 ~~~~ 277 (295)
+.+.
T Consensus 261 ~~~~ 264 (389)
T PRK01278 261 AAKG 264 (389)
T ss_pred HHhc
Confidence 6543
No 291
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.21 E-value=5.6e-10 Score=102.84 Aligned_cols=198 Identities=15% Similarity=0.158 Sum_probs=114.8
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhc----
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALL---- 133 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~---- 133 (295)
-+|++.+++.+.+.. +... +..++ ......+++.++++++.+. .++++||+.|+..++..+.
T Consensus 48 ~~p~v~~a~~~~~~~-~~~~--~~~~~------~~~~~~~~~~l~~~~~~~~-----~~~~~SGs~A~e~al~~~~~~~~ 113 (400)
T PTZ00125 48 CHPKILAALINQAQK-LTLT--SRAFY------NDVLGLAEKYITDLFGYDK-----VLPMNSGAEAGETALKFARKWGY 113 (400)
T ss_pred CCHHHHHHHHHHHHh-cccc--ccccc------CHHHHHHHHHHHhCCCCCE-----EEEeCCcHHHHHHHHHHHHHHHH
Confidence 489999999988764 3211 11111 1233445677777777642 5677788778887776553
Q ss_pred ------CCCCeEEEecCCCCcccCccccccccc-ccc-ce-eeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCC
Q 022564 134 ------KPHDRIMALDLPHGGHLSHGYQTDTKK-ISA-VS-IFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGAS 204 (295)
Q Consensus 134 ------~~gd~Vl~~~~~~~~~~~~~~~~~~~~-~~~-~g-~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~ 204 (295)
..+++|+..+-.|.+............ ... .+ ......+++ ..|++++++.++..++++|++.+.
T Consensus 114 ~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~le~~l~~~~~~~v~~ep~ 187 (400)
T PTZ00125 114 EVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVD------YNDVEALEKLLQDPNVAAFIVEPI 187 (400)
T ss_pred hccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeC------CCCHHHHHHHhCCCCeEEEEEcCc
Confidence 135778887755544321111000000 000 00 000001111 238999999996337899988643
Q ss_pred CC--CCccC----HHHHHHHHHHcCCEEEEEccccccccccCC-CCCCCC--cceEEEeCCCCCCCCCc-e-EEEEEeCC
Q 022564 205 AY--ARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGV-IPSPFE--YADVVTTTTHKSLRGPR-G-AMIFFRKG 273 (295)
Q Consensus 205 n~--~~~~~----l~~I~~ia~~~~~~vivD~a~~~g~~~~~~-~~~~~~--~~D~~~~s~~K~l~gp~-g-G~l~~~~~ 273 (295)
++ |...+ +++|.++|++||+++|+|++|. |.-..+. ...... ..|++++| |+|+++. . |+++++++
T Consensus 188 ~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~-g~g~~G~~~~~~~~~~~pd~~~~s--K~l~~g~~~ig~v~~~~~ 264 (400)
T PTZ00125 188 QGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQT-GLGRTGKLLAHDHEGVKPDIVLLG--KALSGGLYPISAVLANDD 264 (400)
T ss_pred cCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCccchhhHHHhcCCCCCEEEEc--ccccCCCcCcEEEEEcHH
Confidence 33 45555 9999999999999999999985 2211110 000001 25777764 9997643 3 89999988
Q ss_pred chhhh
Q 022564 274 VKEIN 278 (295)
Q Consensus 274 ~~~~~ 278 (295)
+.+..
T Consensus 265 ~~~~~ 269 (400)
T PTZ00125 265 VMLVI 269 (400)
T ss_pred HHhhc
Confidence 76654
No 292
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.16 E-value=1.4e-09 Score=100.23 Aligned_cols=193 Identities=13% Similarity=0.150 Sum_probs=111.5
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhc----
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALL---- 133 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~---- 133 (295)
-.|++.+++.+.+.. +... +. .+ .+ .....+.+.++++.+.+. .+++.||+.|+.+++....
T Consensus 57 ~~p~v~~ai~~~~~~-~~~~--~~-~~-~~----~~~~~l~~~l~~~~~~~~-----~~~~~SGseA~e~Alk~a~~~~~ 122 (396)
T PRK04073 57 RHPKIIQALKDQADK-VTLT--SR-AF-HS----DQLGPWYEKVAKLTGKDM-----VLPMNTGAEAVETAIKAARRWAY 122 (396)
T ss_pred CCHHHHHHHHHHHhh-cccc--cc-cc-CC----HHHHHHHHHHHhcCCCCe-----EEEcCChHHHHHHHHHHHHHHhh
Confidence 479999999988865 2111 11 11 11 122235577777766432 5667777778876666542
Q ss_pred -----CCC-CeEEEecCCCCcccCccccc-----ccc--ccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEE
Q 022564 134 -----KPH-DRIMALDLPHGGHLSHGYQT-----DTK--KISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIV 200 (295)
Q Consensus 134 -----~~g-d~Vl~~~~~~~~~~~~~~~~-----~~~--~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~ 200 (295)
++| ++|+..+..|.+.......+ +.. .....+ +..++ -.|++++++.+++ ++++|+
T Consensus 123 ~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~--------~~d~~~l~~~i~~-~~~~vi 191 (396)
T PRK04073 123 DVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPG--IKKIP--------YGDLEALKAAITP-NTAAFL 191 (396)
T ss_pred hccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCC--ceEeC--------CCCHHHHHHhccc-CeEEEE
Confidence 134 67888875555432111100 000 000011 11111 1278999999876 888888
Q ss_pred EcCCCC--CCccC----HHHHHHHHHHcCCEEEEEccccccccccC-CCCCCCC--cceEEEeCCCCCCCCC--ceEEEE
Q 022564 201 AGASAY--ARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAG-VIPSPFE--YADVVTTTTHKSLRGP--RGAMIF 269 (295)
Q Consensus 201 l~~~n~--~~~~~----l~~I~~ia~~~~~~vivD~a~~~g~~~~~-~~~~~~~--~~D~~~~s~~K~l~gp--~gG~l~ 269 (295)
++++++ |...+ +++|.++|++||+++|+|++|. |.-..+ ....... ..|++++ +|.++++ +.|+++
T Consensus 192 iep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~-g~g~~g~~~~~~~~~~~pdi~~~--sK~lg~gg~~ig~~~ 268 (396)
T PRK04073 192 VEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQT-GLGRTGKLFACDWDNVTPDMYIL--GKALGGGVFPISCVA 268 (396)
T ss_pred EcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchh-CCCcCcHHHHhhhcCCCCCEEEe--cccccCCCCcceEEE
Confidence 875433 34333 8899999999999999999987 221111 0000001 2677765 6988764 458999
Q ss_pred EeCCchhhh
Q 022564 270 FRKGVKEIN 278 (295)
Q Consensus 270 ~~~~~~~~~ 278 (295)
+++++.+..
T Consensus 269 ~~~~i~~~~ 277 (396)
T PRK04073 269 ANRDILGVF 277 (396)
T ss_pred EcHHHHhhh
Confidence 998876544
No 293
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.15 E-value=8.8e-10 Score=98.14 Aligned_cols=184 Identities=14% Similarity=0.184 Sum_probs=124.7
Q ss_pred cccCCcchHHHHHHHHHHHHHHHcCC-CCCCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCcccccccc
Q 022564 82 RYYGGNEYIDMAESLCQKRALEAFRL-DPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTK 159 (295)
Q Consensus 82 ~~~~~~~~~~~l~~~~~~~la~~~g~-~~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~ 159 (295)
-.|+.+.+..+|...+++...-.++. ....| .|.+|+|.+ +...+++.+++.||.|++-...|++.+.
T Consensus 94 lQYg~s~G~peLl~fik~h~~~~ih~p~~~~w--diiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~AL~-------- 163 (472)
T KOG0634|consen 94 LQYGQSSGIPELLLFIKDHNRPTIHAPPYKNW--DIIITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSALQ-------- 163 (472)
T ss_pred hccccccCcHHHHHHHHHhccccccCCCCCCc--eEEEecCCchHHHHHHHHhhcCCCceEEecccchHHHH--------
Confidence 36788888888885555533322233 45556 899999999 8887999999999999999876666654
Q ss_pred ccccceeeeEEEeeecCCCCCCCCHHHHHHHHhh--------cCCcEEEE--cCCCC-C---CccCHHHHHHHHHHcCCE
Q 022564 160 KISAVSIFFETMPYRLNESTGYIDYDQLEKSATL--------FRPKLIVA--GASAY-A---RLYDYERIRKVCNKQKAI 225 (295)
Q Consensus 160 ~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~--------~~tk~i~l--~~~n~-~---~~~~l~~I~~ia~~~~~~ 225 (295)
.++..| +.++|++.| ...+++|.|++.+.. .++++++. +..|+ | ..+--++|.+||++|+++
T Consensus 164 s~~a~g--v~~ipv~md--~~Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfL 239 (472)
T KOG0634|consen 164 SMEALG--VKIIPVKMD--QDGIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFL 239 (472)
T ss_pred hccccC--ceEEecccc--CCCCCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEE
Confidence 333556 555776665 567899999998852 24667765 34555 3 333455999999999999
Q ss_pred EEEEcccccccccc-------------------CCCCCCC----CcceEEEeCCCCCCCCCce--EEEEEeCCchhhhcc
Q 022564 226 MLADMAHISGLVAA-------------------GVIPSPF----EYADVVTTTTHKSLRGPRG--AMIFFRKGVKEINKQ 280 (295)
Q Consensus 226 vivD~a~~~g~~~~-------------------~~~~~~~----~~~D~~~~s~~K~l~gp~g--G~l~~~~~~~~~~~~ 280 (295)
|+.|+.+..--+.. .+.+..+ .|.-+-..|++|-+ +|.- |++.+++-+.+.+.+
T Consensus 240 IVeDdpYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKii-aPGlRlG~it~~~~~l~ril~ 318 (472)
T KOG0634|consen 240 IVEDDPYYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKII-APGLRLGWITGNSLFLKRILD 318 (472)
T ss_pred EEecCccceeeccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhh-cCcceeEEeecCHHHHHHHhh
Confidence 99999976544331 0011111 13336688999965 4544 999999866554333
No 294
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.11 E-value=1.3e-09 Score=100.25 Aligned_cols=205 Identities=12% Similarity=0.123 Sum_probs=118.8
Q ss_pred cCceecCCCC-----CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCC
Q 022564 47 KGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSG 121 (295)
Q Consensus 47 ~~i~L~~~~~-----~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG 121 (295)
+.|++..+.. .-.|.+.+++.+.+.... .. .. .| ...++.++.++++++.+. + ++++++|
T Consensus 40 ~~iD~~~g~~~~~lG~~~p~v~~a~~~~~~~~~-~~--~~-~~-----~~~~~~~la~~l~~~~~~--~----~v~~~~g 104 (396)
T PRK02627 40 EYLDFLAGIAVNNLGHCHPKLVEAIQEQAAKLI-HT--SN-LY-----YIEPQEELAEKLVELSGM--D----KVFFCNS 104 (396)
T ss_pred EEEECCccHHhccCCCCCHHHHHHHHHHHhhcc-cc--cc-cc-----CCHHHHHHHHHHHhhcCC--C----EEEECCC
Confidence 4466654322 125899999988876521 01 11 11 134555566888888765 3 6888888
Q ss_pred hH-HHHHHHHhhcCCC-------CeEEEecCCCCcccCccccccccccccceeee-EEEeeecCCCCC----CCCHHHHH
Q 022564 122 SP-SNFQVYTALLKPH-------DRIMALDLPHGGHLSHGYQTDTKKISAVSIFF-ETMPYRLNESTG----YIDYDQLE 188 (295)
Q Consensus 122 ~~-a~~~~~~al~~~g-------d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~v~~~~~~~~~----~id~e~l~ 188 (295)
++ |+.+++..+...+ ++|++..+.|.+....... ..+... .....+.. ++. ..|+++++
T Consensus 105 g~eA~~~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~-------~~~~~~~~~~~~~~~-~~~~~~~~~d~~~l~ 176 (396)
T PRK02627 105 GAEANEAAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLS-------ATGQPKYQEGFEPLV-EGFIYVPFNDIEALK 176 (396)
T ss_pred cHHHHHHHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHH-------hcCCccccccCCCCC-CCceEeCCCCHHHHH
Confidence 77 8887777654332 6788888666544211110 111000 00000011 111 22899999
Q ss_pred HHHhhcCCcEEEEcCCCC-C-----CccCHHHHHHHHHHcCCEEEEEccccccccccCC-CCC-CCC-cceEEEeCCCCC
Q 022564 189 KSATLFRPKLIVAGASAY-A-----RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGV-IPS-PFE-YADVVTTTTHKS 259 (295)
Q Consensus 189 ~~i~~~~tk~i~l~~~n~-~-----~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~-~~~-~~~-~~D~~~~s~~K~ 259 (295)
+++.+ ++++|++.++++ + ....+++|.++|++||+++|+|++++ |....+. ... ... ..|+++ ++|.
T Consensus 177 ~~i~~-~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~-g~g~~g~~~~~~~~~~~pdi~t--~sK~ 252 (396)
T PRK02627 177 AAITD-KTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQT-GMGRTGKLFAYQHYGIEPDIMT--LAKG 252 (396)
T ss_pred HhcCC-CeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhc-CCCccCceeeehhcCCCCCEEE--Ecch
Confidence 99976 899999964333 2 23348899999999999999999986 3222111 000 011 256554 6798
Q ss_pred CCC-CceEEEEEeCCchhhh
Q 022564 260 LRG-PRGAMIFFRKGVKEIN 278 (295)
Q Consensus 260 l~g-p~gG~l~~~~~~~~~~ 278 (295)
+++ .+-|++++++++.+..
T Consensus 253 ~~~G~rig~~~~~~~~~~~~ 272 (396)
T PRK02627 253 LGGGVPIGAVLAKEKVADVF 272 (396)
T ss_pred hhCCcccEEEEEcHHHHhcc
Confidence 863 2348888888765543
No 295
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.04 E-value=6.5e-09 Score=95.75 Aligned_cols=195 Identities=14% Similarity=0.154 Sum_probs=112.0
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhh---c-
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTAL---L- 133 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al---~- 133 (295)
-.|++.+++.+.+.+.+..+ . .+ .+ ....++.+.++++++.+. ..++.||+.|+.+++... .
T Consensus 52 ~~p~v~~a~~~~~~~~~~~~---~-~~-~~----~~~~~la~~L~~~~~~~~-----~~f~~SGseA~e~Alk~ar~~~~ 117 (397)
T TIGR03246 52 AHPELVKALIEQADKLWHIG---N-GY-TN----EPVLRLAKKLVDATFADK-----VFFCNSGAEANEAALKLARRYAL 117 (397)
T ss_pred CCHHHHHHHHHHHHhccccc---C-cc-CC----HHHHHHHHHHHhhCCCCE-----EEEeCCcHHHHHHHHHHHHHHHH
Confidence 48999999999887522111 1 01 11 222335577877776432 566677777888766654 1
Q ss_pred ----CCCCeEEEecCCCCcccCcccccc-----ccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCC
Q 022564 134 ----KPHDRIMALDLPHGGHLSHGYQTD-----TKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGAS 204 (295)
Q Consensus 134 ----~~gd~Vl~~~~~~~~~~~~~~~~~-----~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~ 204 (295)
...++|+..+-.|.+......... .....-....+..++ -.|++++++.+.+ ++++|++.+.
T Consensus 118 ~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~d~~~l~~~l~~-~~aavi~Epi 188 (397)
T TIGR03246 118 DKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAP--------YNDLAAAKALISD-KTCAVIVEPI 188 (397)
T ss_pred hcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeC--------CCCHHHHHHHhcc-CeEEEEEecc
Confidence 134567777655544321111000 000000000011111 1389999999976 7889998744
Q ss_pred CC--C----CccCHHHHHHHHHHcCCEEEEEccccccccccCC----CCCCCCcceEEEeCCCCCCC-CCceEEEEEeCC
Q 022564 205 AY--A----RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGV----IPSPFEYADVVTTTTHKSLR-GPRGAMIFFRKG 273 (295)
Q Consensus 205 n~--~----~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~----~~~~~~~~D~~~~s~~K~l~-gp~gG~l~~~~~ 273 (295)
+. | ....+++|.++|++||+++|+|++| .|.-..+. ...++ ..|++ +..|.++ |.+-|+++++++
T Consensus 189 ~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~-tG~Gr~G~~~a~~~~gv-~pDi~--t~~K~lggG~pigav~~~~~ 264 (397)
T TIGR03246 189 QGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQ-TGVGRTGELYAYMHYGV-TPDIL--TSAKALGGGFPIGAMLTTTE 264 (397)
T ss_pred cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechh-hcCCccccchhhhhcCC-CCCEE--EeehhhhCCcceeEEEEcHH
Confidence 33 3 3455899999999999999999998 44422221 11111 26766 5689884 444588888888
Q ss_pred chhhhc
Q 022564 274 VKEINK 279 (295)
Q Consensus 274 ~~~~~~ 279 (295)
+.+...
T Consensus 265 i~~~~~ 270 (397)
T TIGR03246 265 IAAHLK 270 (397)
T ss_pred HHHhcc
Confidence 765543
No 296
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.03 E-value=9.8e-09 Score=93.89 Aligned_cols=209 Identities=13% Similarity=0.102 Sum_probs=117.2
Q ss_pred cCceecCCCC-----CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCC
Q 022564 47 KGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSG 121 (295)
Q Consensus 47 ~~i~L~~~~~-----~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG 121 (295)
+.+++..+.. ..+|++.+++.+.+.+.. . .+. ....+++.++.+++.+..+.+. -+++.+|
T Consensus 30 ~~lD~~s~~~~~~lG~~~p~v~~a~~~~~~~~~--~-~~~------~~~~~~~~~la~~l~~~~~~~~-----~~~~~sG 95 (377)
T PRK02936 30 TYLDFTSGIAVCNLGHCHPTVTKAVQEQLDDIW--H-VSN------LFTNSLQEEVASLLAENSAGDL-----VFFCNSG 95 (377)
T ss_pred EEEECCcchhhccCCCCCHHHHHHHHHHHHhcc--c-ccc------ccCCHHHHHHHHHHHhcCCCCE-----EEEeCCc
Confidence 4566655542 358999999999887622 1 111 1113455556677766655321 4555666
Q ss_pred hHHHHHHHHhh-c-CCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCC-CCCHHHHHHHHhhcCCcE
Q 022564 122 SPSNFQVYTAL-L-KPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTG-YIDYDQLEKSATLFRPKL 198 (295)
Q Consensus 122 ~~a~~~~~~al-~-~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~-~id~e~l~~~i~~~~tk~ 198 (295)
+.++.+++... . ..+++|++.+..|.+................+ + .++..+.... -.|++++++.+.+ ++++
T Consensus 96 ~~a~~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~d~~~l~~~~~~-~~~~ 170 (377)
T PRK02936 96 AEANEAALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEG--F--GPLLPGFTHVPFNDIKALKEVMNE-EVAA 170 (377)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEECCCcCCCcHHhhhccCCcccccc--C--CCCCCCceEeCCCCHHHHHHhccC-CeEE
Confidence 66888777643 2 33467888876665442211111000000000 0 0100000000 1278999999976 7888
Q ss_pred EEEc-CCCCC-----CccCHHHHHHHHHHcCCEEEEEccccccccccCC----CCCCCCcceEEEeCCCCCCCC-CceEE
Q 022564 199 IVAG-ASAYA-----RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGV----IPSPFEYADVVTTTTHKSLRG-PRGAM 267 (295)
Q Consensus 199 i~l~-~~n~~-----~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~----~~~~~~~~D~~~~s~~K~l~g-p~gG~ 267 (295)
|++. ..+.+ ....+++|.++|++||+++|+|++|. |....+. ...++ ..|++ +++|.+++ .+.|+
T Consensus 171 ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~-g~g~~g~~~~~~~~~~-~~di~--t~sK~l~~G~~ig~ 246 (377)
T PRK02936 171 VMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQT-GIGRTGTLFAYEQFGL-DPDIV--TVAKGLGNGIPVGA 246 (377)
T ss_pred EEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCchhhHHHhhCC-CCcEE--EEcccccCCCccEE
Confidence 8885 22222 33459999999999999999999985 4322221 01110 14654 57998863 35688
Q ss_pred EEEeCCchhhh
Q 022564 268 IFFRKGVKEIN 278 (295)
Q Consensus 268 l~~~~~~~~~~ 278 (295)
+++++++.+..
T Consensus 247 v~~~~~~~~~~ 257 (377)
T PRK02936 247 MIGKKELGTAF 257 (377)
T ss_pred EEEcHHHHhhc
Confidence 98888876644
No 297
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.02 E-value=1.1e-08 Score=94.39 Aligned_cols=195 Identities=13% Similarity=0.105 Sum_probs=111.4
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhh---c-
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTAL---L- 133 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al---~- 133 (295)
-.|++.+++.+.+.+....+. ...++. ..++.+.++++.+.+. ..+++||+.|+.+++... .
T Consensus 57 ~~p~v~~a~~~~~~~~~~~~~-----~~~~~~----~~~l~~~l~~~~~~~~-----~~~~~sGseA~e~a~klar~~~~ 122 (403)
T PRK05093 57 CHPALVKALKEQGEKLWHISN-----VFTNEP----ALRLAKKLIDATFAER-----VFFANSGAEANEAAFKLARRYAC 122 (403)
T ss_pred CCHHHHHHHHHHHHhcCcccC-----ccCCHH----HHHHHHHHHhhCCCCE-----EEEeCchHHHHHHHHHHHHHHHh
Confidence 589999999998865221111 111111 2235577777765432 566777777888666643 1
Q ss_pred ----CCCCeEEEecCCCCcccCccccc-----cccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCC
Q 022564 134 ----KPHDRIMALDLPHGGHLSHGYQT-----DTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGAS 204 (295)
Q Consensus 134 ----~~gd~Vl~~~~~~~~~~~~~~~~-----~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~ 204 (295)
...+.|+..+..|.+.......+ +..+.......+ ..++ ..|++++++.+.+ ++++|++.+.
T Consensus 123 ~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~------~~d~~~l~~~l~~-~~aaiiiep~ 193 (403)
T PRK05093 123 DRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADI--THVP------FNDLAAVKAVIDD-HTCAVVVEPI 193 (403)
T ss_pred hcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCc--EEeC------CCCHHHHHHHhcC-CeEEEEEecc
Confidence 12356777775554432111100 000000000011 1111 1288999999876 8899998744
Q ss_pred CC--CC----ccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCC--C--cceEEEeCCCCCCC-CCceEEEEEeCC
Q 022564 205 AY--AR----LYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPF--E--YADVVTTTTHKSLR-GPRGAMIFFRKG 273 (295)
Q Consensus 205 n~--~~----~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~--~--~~D~~~~s~~K~l~-gp~gG~l~~~~~ 273 (295)
++ +. ...+++|.++|++||+++|+|++|. |....+.. ... . ..|+ .++.|.++ |.+.|+++++++
T Consensus 194 ~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~g~~g~~-~~~~~~~~~pdi--~s~sK~l~~G~rig~vv~~~~ 269 (403)
T PRK05093 194 QGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQT-GMGRTGDL-FAYMHYGVTPDI--LTSAKALGGGFPIGAMLTTAE 269 (403)
T ss_pred cCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-CCCCCccc-hhhhhcCCCCCE--EEecccccCCcceEEEEEcHH
Confidence 44 22 2348999999999999999999987 44332211 110 1 2554 46689885 445599999888
Q ss_pred chhhhc
Q 022564 274 VKEINK 279 (295)
Q Consensus 274 ~~~~~~ 279 (295)
+.+...
T Consensus 270 i~~~l~ 275 (403)
T PRK05093 270 IASHFK 275 (403)
T ss_pred HHhhcC
Confidence 766543
No 298
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.01 E-value=4.5e-09 Score=95.87 Aligned_cols=164 Identities=18% Similarity=0.174 Sum_probs=96.9
Q ss_pred chHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhh---cCCCCeEEEecCCCCcccCcccccccccccc
Q 022564 88 EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTAL---LKPHDRIMALDLPHGGHLSHGYQTDTKKISA 163 (295)
Q Consensus 88 ~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al---~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~ 163 (295)
++.-+..-+.+..++++.|.+. ++..+-.|++ +-.+++++. -+.+++|+++...|+.+..... . -+..
T Consensus 106 QG~Lq~lfe~Qs~i~eLTGmdv----aNaSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~-t---~a~~ 177 (429)
T PF02347_consen 106 QGRLQALFEYQSMICELTGMDV----ANASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLR-T---YAAP 177 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHTSSE----E-SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHH-H---HCCH
T ss_pred HHHHHHHHHHHHHHHHhhCCCc----cCCCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHH-H---hhhh
Confidence 3444444467899999999986 3666767777 333344443 2344699999988887754221 1 1223
Q ss_pred ceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCC-CCccCHHHHHHHHHHcCCEEEEEccccccccccCCC
Q 022564 164 VSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY-ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI 242 (295)
Q Consensus 164 ~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~-~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~ 242 (295)
.|.++ +.++.+ +++..| .+ ++.+|++.+||+ |...++++|++++|++|.++++ ++.- ......
T Consensus 178 ~g~~i--v~~~~~-~~~~~d--------~~-~~a~v~vq~Pn~~G~~ed~~~i~~~~h~~gal~~~-~ad~---~aL~~l 241 (429)
T PF02347_consen 178 LGIEI--VEVPLD-EDGTTD--------DD-DTAAVMVQNPNTFGVFEDIKEIADIAHAAGALVIV-GADP---NALGGL 241 (429)
T ss_dssp CCEEE--EEE-BB-TTCSB---------ST-TEEEEEEESS-TTSB--THHHHHHHHHHTT-EEEE-CGGC---CGCCTC
T ss_pred CCeEE--EEeccc-ccCCcc--------cc-CeEEEEeecCCCCceEeeHHHHHHHHHHcCCEEEE-ecCH---HHHhCc
Confidence 45444 444455 345555 44 899999987777 7888899999999999999887 5532 222333
Q ss_pred CCCCC-cceEEEeCCCCCCC------CCceEEEEEeCCchh
Q 022564 243 PSPFE-YADVVTTTTHKSLR------GPRGAMIFFRKGVKE 276 (295)
Q Consensus 243 ~~~~~-~~D~~~~s~~K~l~------gp~gG~l~~~~~~~~ 276 (295)
..|-. |+|+++++ ||.|+ ||..|++.+++++..
T Consensus 242 ~~Pge~GADI~vg~-~Q~fg~p~~~GGP~~G~~a~~~~l~r 281 (429)
T PF02347_consen 242 KSPGEYGADIVVGE-HQTFGIPMGFGGPGAGFFAVREDLVR 281 (429)
T ss_dssp --GGGGT-SEEEEC-CTTTT---CCC-S--EEEEE-GGGGG
T ss_pred CChhhcCccEEeeC-CCCCcccCCCCCCCeeeEEEhhhhhh
Confidence 33333 79999777 77674 555599999998654
No 299
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=99.00 E-value=7.9e-10 Score=98.15 Aligned_cols=173 Identities=19% Similarity=0.178 Sum_probs=110.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhh---cCCC----------CeEEEe-cCCCCcccCcccc
Q 022564 90 IDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTAL---LKPH----------DRIMAL-DLPHGGHLSHGYQ 155 (295)
Q Consensus 90 ~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al---~~~g----------d~Vl~~-~~~~~~~~~~~~~ 155 (295)
..-.+..+-..+.+..|.+...+ .|+...|+.+++.++.+. .-|+ +-|+.. +..|.+...
T Consensus 139 F~lmE~~vl~km~~ivGw~~~~D--gIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~k---- 212 (510)
T KOG0629|consen 139 FVLMEEEVLAKMREIVGWEEGGD--GIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIKK---- 212 (510)
T ss_pred EEeehHHHHHHHHHHhCCCCCCC--ceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHHH----
Confidence 33455556677888889876421 555544444666554433 1122 234433 333444332
Q ss_pred ccccccccceee-eEEEeeecCCCCCCCCHHHHHHHHhhcCCc-----EEEEc--CCCCCCccCHHHHHHHHHHcCCEEE
Q 022564 156 TDTKKISAVSIF-FETMPYRLNESTGYIDYDQLEKSATLFRPK-----LIVAG--ASAYARLYDYERIRKVCNKQKAIML 227 (295)
Q Consensus 156 ~~~~~~~~~g~~-~~~v~~~~~~~~~~id~e~l~~~i~~~~tk-----~i~l~--~~n~~~~~~l~~I~~ia~~~~~~vi 227 (295)
++.+.|.. ...+.++.+ +.+.+++++||+.|...+.+ +|-.+ .+-.|...|++.|+++|++|++|++
T Consensus 213 ----aAa~lg~gtd~c~~v~t~-e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDdL~~iadiC~k~~lWmH 287 (510)
T KOG0629|consen 213 ----AAAFLGLGTDHCIKVKTD-ERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDDLNGIADICEKHKLWMH 287 (510)
T ss_pred ----HHHHhccCCceeEEeccc-ccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCcHHHHHHHHHhcCEEEE
Confidence 22334422 122333455 67899999999998643333 33333 3334789999999999999999999
Q ss_pred EEccccccccccCCCCCCCC---cceEEEeCCCCCCCCCce-EEEEEeCC
Q 022564 228 ADMAHISGLVAAGVIPSPFE---YADVVTTTTHKSLRGPRG-AMIFFRKG 273 (295)
Q Consensus 228 vD~a~~~g~~~~~~~~~~~~---~~D~~~~s~~K~l~gp~g-G~l~~~~~ 273 (295)
+|+|++.|.+....+...+. .+|.++.++||+++.|-- +.+++|.+
T Consensus 288 vDAAwGGglLmS~k~R~kl~Giera~SvtwnpHK~~gaplqCsa~l~r~~ 337 (510)
T KOG0629|consen 288 VDAAWGGGLLMSRKHRHKLTGIERANSVTWNPHKLMGAPLQCSAFLTREE 337 (510)
T ss_pred eecccccccccChhhHhhccCccccCceeecHHHhhcCcchhhHHHHHHH
Confidence 99999888776654433333 499999999999998877 77777765
No 300
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=98.97 E-value=3.6e-09 Score=88.54 Aligned_cols=160 Identities=19% Similarity=0.156 Sum_probs=112.1
Q ss_pred HHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhhcCCC-CeEEEecCCCCcccCccccccccccccceeeeEEEeeecCC
Q 022564 100 RALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPH-DRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE 177 (295)
Q Consensus 100 ~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al~~~g-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 177 (295)
.++.--++.++ +|.++.|+. .+.+++++.+.|| ++|+... |.|.+|.-.+.+.++++..+| .+
T Consensus 77 a~~~dkpLt~d----nic~GvGsDE~ID~iiR~~c~PGkeKIl~cP--------PtysMY~v~A~iNd~eVvkvp--l~- 141 (375)
T KOG0633|consen 77 ALAQDKPLTSD----NICVGVGSDELIDLIIRCVCDPGKEKILDCP--------PTYSMYVVDAAINDAEVVKVP--LN- 141 (375)
T ss_pred hcccCCCCCcc----ceEEecCcHHHHHHHHhheecCCccceeecC--------CcceeEEEEeecCCceEEEec--CC-
Confidence 33333466776 899999999 7777899999999 8899888 556666555567776665555 55
Q ss_pred CCCCCCHHHHHHHHhhc-CCcEEEEcCCCCC--CccCHHHHHHHHHHc-CCEEEEEcccccccc-ccC---CCCCCCCcc
Q 022564 178 STGYIDYDQLEKSATLF-RPKLIVAGASAYA--RLYDYERIRKVCNKQ-KAIMLADMAHISGLV-AAG---VIPSPFEYA 249 (295)
Q Consensus 178 ~~~~id~e~l~~~i~~~-~tk~i~l~~~n~~--~~~~l~~I~~ia~~~-~~~vivD~a~~~g~~-~~~---~~~~~~~~~ 249 (295)
.++++|.|++.+.++.. ++|++++++|+|| .....+.|.++.+.- +.+|++|+|+.-..- ... +...| -
T Consensus 142 pdF~lnvdai~evl~~ds~iK~~F~tSPgNPtg~~ik~~di~KiLe~p~nglVVvDEAYidFsg~~S~~~lV~kYp---N 218 (375)
T KOG0633|consen 142 PDFSLNVDAIAEVLELDSKIKCIFLTSPGNPTGSIIKEDDILKILEMPDNGLVVVDEAYIDFSGVESRMKLVKKYP---N 218 (375)
T ss_pred CCccccHHHHHHHHhccccceEEEEcCCCCCCcccccHHHHHHHHhCCCCcEEEEeeeeEeeccccccchHhHhCC---c
Confidence 47999999999998753 7899999977775 566677777777654 789999999531111 110 11122 3
Q ss_pred eEEEeCCCCCCC--CCceEEEEEeCCchhh
Q 022564 250 DVVTTTTHKSLR--GPRGAMIFFRKGVKEI 277 (295)
Q Consensus 250 D~~~~s~~K~l~--gp~gG~l~~~~~~~~~ 277 (295)
=+++-+++|.|+ |-+-|+-++..++..+
T Consensus 219 LivlqTlSKsfGLAGiRvG~~~~~~~ia~i 248 (375)
T KOG0633|consen 219 LIVLQTLSKSFGLAGIRVGYGAFPLSIAEI 248 (375)
T ss_pred eeehhhhhhhcCcceeEeecccccHHHHHH
Confidence 367788889773 4444888888887654
No 301
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=98.97 E-value=1e-08 Score=95.37 Aligned_cols=159 Identities=18% Similarity=0.186 Sum_probs=115.8
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH---HHHHHHHhhc-CCCC----eEEEecCCCCcccCcccccccccc
Q 022564 90 IDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP---SNFQVYTALL-KPHD----RIMALDLPHGGHLSHGYQTDTKKI 161 (295)
Q Consensus 90 ~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~---a~~~~~~al~-~~gd----~Vl~~~~~~~~~~~~~~~~~~~~~ 161 (295)
..++-..+.+++....|.|. +.+...||+. +-+.++++.+ ..|+ ..|++...|+.+.. .+
T Consensus 580 Y~~lf~~Le~~Lc~iTG~D~----~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNPA--------SA 647 (1001)
T KOG2040|consen 580 YQQLFTELEKDLCEITGFDS----FSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNPA--------SA 647 (1001)
T ss_pred HHHHHHHHHHHhheeecccc----eeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCChh--------hH
Confidence 45555567789999999876 3788889988 5555788874 3443 47788888888743 23
Q ss_pred ccceeeeEEEeeecCCCCCCCCHHHHHHHHhhc--CCcEEEEc-CCCCC-CccCHHHHHHHHHHcCCEEEEEcccccccc
Q 022564 162 SAVSIFFETMPYRLNESTGYIDYDQLEKSATLF--RPKLIVAG-ASAYA-RLYDYERIRKVCNKQKAIMLADMAHISGLV 237 (295)
Q Consensus 162 ~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~--~tk~i~l~-~~n~~-~~~~l~~I~~ia~~~~~~vivD~a~~~g~~ 237 (295)
.++|. +++|+.++ .++.+|..+|+++.+++ +..+++++ ++.+| ....+++++++.++||--|..|+|.--.-+
T Consensus 648 ~Magm--kvvpV~~~-~~G~id~~dLk~kaekh~~~Laa~MvTYPST~GvfE~~i~d~cd~iHehGGQVYlDGANMNAqV 724 (1001)
T KOG2040|consen 648 AMAGM--KVVPVGCD-ANGNIDMVDLKAKAEKHKDNLAALMVTYPSTHGVFEEGIDDICDIIHEHGGQVYLDGANMNAQV 724 (1001)
T ss_pred HhcCC--EEEEeecc-CCCCccHHHHHHHHHHhhhhhheeEEecccccccccccHHHHHHHHHhcCCEEEecCCCcccee
Confidence 36774 45666777 67899999999988753 45678888 56667 667899999999999999999999643322
Q ss_pred ccCCCCCCCCcceEEEeCCCCCCCCCce
Q 022564 238 AAGVIPSPFEYADVVTTTTHKSLRGPRG 265 (295)
Q Consensus 238 ~~~~~~~~~~~~D~~~~s~~K~l~gp~g 265 (295)
. +...+.-|+|+.-.+.||+|+-|.|
T Consensus 725 G--lc~pGd~GaDV~HLNLHKTFcIPHG 750 (1001)
T KOG2040|consen 725 G--LCRPGDIGADVCHLNLHKTFCIPHG 750 (1001)
T ss_pred c--ccCCccccccceeecccceeeecCC
Confidence 2 2222222699999999999975554
No 302
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=98.97 E-value=1.9e-08 Score=92.50 Aligned_cols=191 Identities=15% Similarity=0.137 Sum_probs=106.5
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhc----
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALL---- 133 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~---- 133 (295)
-.|++.+++.+.+.+ ...+.. ....+.+.++.+.+.+..+. +. -++++||+.|+.+++..+.
T Consensus 53 ~~p~v~~a~~~q~~~-~~~~~~--------~~~~~~~~~la~~l~~~~~~--~~---v~f~~SGseA~e~Aik~ar~~~~ 118 (395)
T PRK03715 53 CNPGMVEALAAQAEK-LINPSP--------AFYNEPMAKLAGLLTQHSCF--DK---VFFANSGAEANEGAIKLARKWGR 118 (395)
T ss_pred CCHHHHHHHHHHHHh-cccccc--------cccCHHHHHHHHHHhhccCC--CE---EEEeCCcHHHHHHHHHHHHHHhh
Confidence 379999999988765 211111 11123444455666654433 21 4555566668887766553
Q ss_pred --CCC-CeEEEecCCCCcccCccccccccccccceee-eE--EEeee--cCCCCCCCCHHHHHHHHhhcCCcEEEEcC--
Q 022564 134 --KPH-DRIMALDLPHGGHLSHGYQTDTKKISAVSIF-FE--TMPYR--LNESTGYIDYDQLEKSATLFRPKLIVAGA-- 203 (295)
Q Consensus 134 --~~g-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~--~v~~~--~~~~~~~id~e~l~~~i~~~~tk~i~l~~-- 203 (295)
++| .+|+..+..|.+...... .+.+.. .. ..|.. .. .....|++++++.+.+ ++++|++.+
T Consensus 119 ~~~~~r~~ii~~~~~yHG~t~~~~-------~~s~~~~~~~~~~~~~~~~~-~~~~~d~~~l~~~l~~-~~aavi~Epv~ 189 (395)
T PRK03715 119 KHKNGAYEIITFDHSFHGRTLATM-------SASGKPGWDTIFAPQVPGFP-KAELNDIASVEKLITD-KTVAVMLEPVQ 189 (395)
T ss_pred ccCCCCcEEEEECCCcCCChHHHH-------hhcCCcccccCCCCCCCCce-eeCCchHHHHHHHcCC-CceEEEEeCCc
Confidence 123 567777755544321111 111100 00 00000 00 0012478999998875 788888852
Q ss_pred CCCCCccC----HHHHHHHHHHcCCEEEEEccccccccccCC----CCCCCCcceEEEeCCCCCCCCC-ceEEEEEeCCc
Q 022564 204 SAYARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGV----IPSPFEYADVVTTTTHKSLRGP-RGAMIFFRKGV 274 (295)
Q Consensus 204 ~n~~~~~~----l~~I~~ia~~~~~~vivD~a~~~g~~~~~~----~~~~~~~~D~~~~s~~K~l~gp-~gG~l~~~~~~ 274 (295)
++-|...+ +++|.++|++||+++|+|++|. |.-..+. ...++ ..|++++ .|.++|. +.|.+++++++
T Consensus 190 ~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~t-G~GRtG~~~a~~~~gv-~PDi~t~--gK~lg~G~p~~av~~~~~i 265 (395)
T PRK03715 190 GEGGVIPATREFMQQLRALTKQHGLLLIVDEVQT-GCGRTGTLFAYELSGI-EPDIMTL--GKGIGGGVPLAALLAKAEV 265 (395)
T ss_pred CCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCCCcchhhHhhcCC-CCceeee--hhhhhCCcceEEEEEcccc
Confidence 22244444 9999999999999999999987 4322221 11111 2788766 4999763 23666788877
Q ss_pred h
Q 022564 275 K 275 (295)
Q Consensus 275 ~ 275 (295)
.
T Consensus 266 ~ 266 (395)
T PRK03715 266 A 266 (395)
T ss_pred c
Confidence 5
No 303
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=98.96 E-value=2.5e-08 Score=92.61 Aligned_cols=204 Identities=14% Similarity=0.071 Sum_probs=118.5
Q ss_pred cCceecCCCC-----CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCC
Q 022564 47 KGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSG 121 (295)
Q Consensus 47 ~~i~L~~~~~-----~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG 121 (295)
+.+++..+-. ..+|++.+++.+.+.+.. .+ ...+....+ +++.+++++... + .|++++|
T Consensus 49 ~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~--~~-----~~~~~~~~~----lae~l~~~~~~~-~----~v~~~~s 112 (423)
T TIGR00713 49 EYIDYVLSWGPLILGHAHPRVVEAVKEALERGT--SY-----GAPTEAEIL----LAKEIISRVPSV-E----MVRFVNS 112 (423)
T ss_pred EEEEccccccccccCCCCHHHHHHHHHHHHhCC--cC-----CCCCHHHHH----HHHHHHHhCCcc-c----EEEEeCC
Confidence 4566655532 358999999999887622 11 112222233 557777766543 3 5677666
Q ss_pred hH-HHHHHHHhh--cCCCCeEEEecCCCCcccCcccccc-----------ccc-cccceeeeEEEeeecCCCCCCCCHHH
Q 022564 122 SP-SNFQVYTAL--LKPHDRIMALDLPHGGHLSHGYQTD-----------TKK-ISAVSIFFETMPYRLNESTGYIDYDQ 186 (295)
Q Consensus 122 ~~-a~~~~~~al--~~~gd~Vl~~~~~~~~~~~~~~~~~-----------~~~-~~~~g~~~~~v~~~~~~~~~~id~e~ 186 (295)
++ |+.+++... ...+++|+...+.|.+......... ... ....+ ...+.++ ..|+++
T Consensus 113 GseA~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~------~~d~~~ 184 (423)
T TIGR00713 113 GTEATMSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFA--KLTLVLP------YNDLEA 184 (423)
T ss_pred HHHHHHHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccc--cceEEeC------CCCHHH
Confidence 66 877666643 2356899999987777532111000 000 00000 0011111 128999
Q ss_pred HHHHHhh--cCCcEEEEc--CCCCCCccC----HHHHHHHHHHcCCEEEEEccccccccccCC--C-CCCCCcceEEEeC
Q 022564 187 LEKSATL--FRPKLIVAG--ASAYARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGV--I-PSPFEYADVVTTT 255 (295)
Q Consensus 187 l~~~i~~--~~tk~i~l~--~~n~~~~~~----l~~I~~ia~~~~~~vivD~a~~~g~~~~~~--~-~~~~~~~D~~~~s 255 (295)
+++.++. .++++|++. .+|.|...+ +++|.++|++||+++|+|++|. |...... . ...+ ..|++ +
T Consensus 185 l~~~i~~~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~-g~r~g~~~~~~~~~~-~pDi~--t 260 (423)
T TIGR00713 185 LEEVFEEYGEEIAGVIVEPVAGNMGVVPPKPEFLAGLRALTEEYGSLLIFDEVMT-GFRVALGGAQEYFGV-EPDLT--T 260 (423)
T ss_pred HHHHHHHcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccc-ccccCcchhHHHhCC-Ccchh--h
Confidence 9999873 267888884 444353333 7899999999999999999984 3321110 0 0110 25644 6
Q ss_pred CCCCCC-CCceEEEEEeCCchhhh
Q 022564 256 THKSLR-GPRGAMIFFRKGVKEIN 278 (295)
Q Consensus 256 ~~K~l~-gp~gG~l~~~~~~~~~~ 278 (295)
+.|.++ |.+.|++++++++.+..
T Consensus 261 ~sK~l~~G~pig~v~~~~~i~~~~ 284 (423)
T TIGR00713 261 LGKIIGGGLPVGAFGGRREIMERL 284 (423)
T ss_pred hhhhhcCCCceeeeeEHHHHHHhh
Confidence 899885 34569999998876544
No 304
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.91 E-value=2.7e-08 Score=89.09 Aligned_cols=213 Identities=15% Similarity=0.196 Sum_probs=120.4
Q ss_pred cCceecCCCCC-----CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCC
Q 022564 47 KGLELIPSENF-----TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSG 121 (295)
Q Consensus 47 ~~i~L~~~~~~-----~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG 121 (295)
+.|++.+|-.. ..|.+.+++.+.+..-+..+ ..|+ .+...++.+.+.+..+ ..+ .|+|+++
T Consensus 43 ~YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl~h~s---n~~~------~~~~~~la~~L~~~s~-~~d----~vff~NS 108 (404)
T COG4992 43 EYLDFAAGIAVNNLGHCHPALVEALKEQAEKLWHVS---NLFY------NEPQAELAEKLVELSP-FAD----RVFFCNS 108 (404)
T ss_pred EeeeeccceeeeccCCCCHHHHHHHHHHHHHhhhcc---cccC------ChHHHHHHHHHHhhCc-ccc----EEEEcCC
Confidence 45777655432 48999999988766543211 1111 2333345577777776 444 6777665
Q ss_pred hH-HHHHHHHhh---cC-C-CCeEEEecCCCCcccCcccc-----cccccc--ccceeeeEEEeeecCCCCCCCCHHHHH
Q 022564 122 SP-SNFQVYTAL---LK-P-HDRIMALDLPHGGHLSHGYQ-----TDTKKI--SAVSIFFETMPYRLNESTGYIDYDQLE 188 (295)
Q Consensus 122 ~~-a~~~~~~al---~~-~-gd~Vl~~~~~~~~~~~~~~~-----~~~~~~--~~~g~~~~~v~~~~~~~~~~id~e~l~ 188 (295)
.+ |+.+++... .. + .-+|+.....|.+-..-... -|++.- ..-| +..+| . -|+++++
T Consensus 109 GaEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g--~~~vp--f------nDi~al~ 178 (404)
T COG4992 109 GAEANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPG--FRHVP--F------NDIEALE 178 (404)
T ss_pred cHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCC--ceecC--C------CCHHHHH
Confidence 55 888766544 22 2 34788777666543211111 011110 0111 11222 1 2899999
Q ss_pred HHHhhcCCcEEEEc------CCCCCCccCHHHHHHHHHHcCCEEEEEccccccccccC-CCCCCC--CcceEEEeCCCCC
Q 022564 189 KSATLFRPKLIVAG------ASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAG-VIPSPF--EYADVVTTTTHKS 259 (295)
Q Consensus 189 ~~i~~~~tk~i~l~------~~n~~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~-~~~~~~--~~~D~~~~s~~K~ 259 (295)
+++++ +|.+|++- .-+++...-++++.++|++||+++|.|+.|. |.-..+ +..... -..|+++ .-|.
T Consensus 179 ~ai~~-~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQt-G~GRTGk~fA~e~~gV~PDI~t--laK~ 254 (404)
T COG4992 179 AAIDE-DTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQT-GLGRTGKLFAYEHYGVEPDILT--LAKA 254 (404)
T ss_pred HHhcc-CeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEecccc-CCCccchHHHHHHhCCCCCEEE--eecc
Confidence 99998 99999983 2222345558899999999999999999986 221111 111000 0256665 4588
Q ss_pred CCCCce-EEEEEeCCchhhhccC-CeeEEE
Q 022564 260 LRGPRG-AMIFFRKGVKEINKQG-KEFTCR 287 (295)
Q Consensus 260 l~gp~g-G~l~~~~~~~~~~~~~-~~~~~~ 287 (295)
|+|.-- |.++.++.+.+.-..| +..+|.
T Consensus 255 LgGG~PigA~la~~~~~~~~~~G~HgSTfG 284 (404)
T COG4992 255 LGGGFPIGAMLATEEIASAFTPGDHGSTFG 284 (404)
T ss_pred ccCCccceeeEEchhhhhcCCCCcccCCCC
Confidence 866433 6666666555544344 555543
No 305
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=98.91 E-value=7.5e-08 Score=88.85 Aligned_cols=197 Identities=13% Similarity=0.108 Sum_probs=109.0
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhc----
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALL---- 133 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~---- 133 (295)
..|++.+++.+.+.. +..+.+ .+ .+ ....++.+.++++++.+. .++++||+.|+..++..+.
T Consensus 54 ~~p~v~~a~~~~~~~-~~~~~~---~~-~~----~~~~~l~~~l~~~~~~~~-----~~~~~SGs~A~e~ai~~a~~~~~ 119 (401)
T TIGR01885 54 CHPKIVKALTEQAQK-LTLSSR---AF-YN----DVFGEFAEYVTKLFGYDK-----VLPMNTGAEAVETAIKLARKWGY 119 (401)
T ss_pred CCHHHHHHHHHHHHh-cccccc---cc-CC----HHHHHHHHHHHhhcCCCE-----EEEeCccHHHHHHHHHHHHHHhh
Confidence 479999999988765 321111 11 11 222335577888887532 5777788878887776541
Q ss_pred -----CC-CCeEEEecCCCCcc-cCccccccccccc-cceee-eEEEeeecCCCCCCCCHHHHHHHHhh--cCCcEEEEc
Q 022564 134 -----KP-HDRIMALDLPHGGH-LSHGYQTDTKKIS-AVSIF-FETMPYRLNESTGYIDYDQLEKSATL--FRPKLIVAG 202 (295)
Q Consensus 134 -----~~-gd~Vl~~~~~~~~~-~~~~~~~~~~~~~-~~g~~-~~~v~~~~~~~~~~id~e~l~~~i~~--~~tk~i~l~ 202 (295)
.+ .+.|+.....|.+. ............. ..+.. .....++ -.|+++++++++. .++.+|++.
T Consensus 120 ~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~le~~l~~~~~~~~avi~E 193 (401)
T TIGR01885 120 KVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIP------YNNLEALEEALEDHGPNVCAFIVE 193 (401)
T ss_pred hhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeC------CCCHHHHHHHHHhcCCCEEEEEEe
Confidence 13 45677776665443 1111000000000 00000 0011111 1278999998863 245566664
Q ss_pred -CC-CCCCccC----HHHHHHHHHHcCCEEEEEccccccccccCCC----CCCCCcceEEEeCCCCCCCCC--ceEEEEE
Q 022564 203 -AS-AYARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGVI----PSPFEYADVVTTTTHKSLRGP--RGAMIFF 270 (295)
Q Consensus 203 -~~-n~~~~~~----l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~----~~~~~~~D~~~~s~~K~l~gp--~gG~l~~ 270 (295)
.. ..|...+ +++|.++|++||+++|+|++|. |.-..+.. ..+ ...|+++++ |.+++. +-|+++.
T Consensus 194 ~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~-g~g~~G~~~~~~~~~-~~~di~~~g--K~l~~g~~~ig~v~~ 269 (401)
T TIGR01885 194 PIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQT-GLGRTGKLLCVDHEN-VKPDIVLLG--KALSGGVYPVSAVLA 269 (401)
T ss_pred CccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-CCCccchhhHHhhcC-CCCCEEEee--ccccCCCCCcEEEEE
Confidence 22 2244444 9999999999999999999984 43222211 011 136877765 988653 3377888
Q ss_pred eCCchhhh
Q 022564 271 RKGVKEIN 278 (295)
Q Consensus 271 ~~~~~~~~ 278 (295)
++++.+..
T Consensus 270 ~~~i~~~~ 277 (401)
T TIGR01885 270 DDDVMLTI 277 (401)
T ss_pred cHHHHhhc
Confidence 87765543
No 306
>PLN02624 ornithine-delta-aminotransferase
Probab=98.89 E-value=8.6e-08 Score=90.23 Aligned_cols=193 Identities=17% Similarity=0.109 Sum_probs=106.5
Q ss_pred CHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcC----
Q 022564 59 SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLK---- 134 (295)
Q Consensus 59 ~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~---- 134 (295)
.|.+.+++.+.+.+ +.... .. +. + ....++.+.++++++.+. .++.+||+.|+..++.....
T Consensus 93 ~p~v~~ai~~ql~~-~~~~~--~~-~~-~----~~~~~la~~L~~~~~~~~-----~~f~~SGseA~e~AlklAr~~~~~ 158 (474)
T PLN02624 93 HPKIIKALTEQAEK-LTLSS--RA-FY-N----DKFPEFAEYLTSMFGYDM-----VLPMNTGAEGVETAIKLARKWGYE 158 (474)
T ss_pred CHHHHHHHHHHHHh-cCCcc--cc-cC-C----HHHHHHHHHHHhhcCCCe-----EEEeCChHHHHHHHHHHHHHHHHh
Confidence 89999999998876 32111 11 11 1 222235577777776532 56667777777766642211
Q ss_pred -----CCC-eEEEecCCCCcccCcccccc-----ccc--cccceeeeEEEeeecCCCCCCCCHHHHHHHHhh--cCCcEE
Q 022564 135 -----PHD-RIMALDLPHGGHLSHGYQTD-----TKK--ISAVSIFFETMPYRLNESTGYIDYDQLEKSATL--FRPKLI 199 (295)
Q Consensus 135 -----~gd-~Vl~~~~~~~~~~~~~~~~~-----~~~--~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~--~~tk~i 199 (295)
++. .|+...-.|.+.......+- ... ....+ +..++ . .|++++++.++. .++++|
T Consensus 159 ~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~--~~~~~--~------~d~~~l~~~l~~~~~~iaai 228 (474)
T PLN02624 159 KKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPG--HLKVD--F------GDLDALEKIFEEDGDRIAAF 228 (474)
T ss_pred hcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCC--ceEeC--C------CCHHHHHHHHHhCCCCEEEE
Confidence 133 46655543433311100000 000 00001 11111 1 278999998863 257788
Q ss_pred EEcCCCC--CCccC----HHHHHHHHHHcCCEEEEEccccccccccCC-CCC--CCCcceEEEeCCCCCCCCC--ceEEE
Q 022564 200 VAGASAY--ARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGV-IPS--PFEYADVVTTTTHKSLRGP--RGAMI 268 (295)
Q Consensus 200 ~l~~~n~--~~~~~----l~~I~~ia~~~~~~vivD~a~~~g~~~~~~-~~~--~~~~~D~~~~s~~K~l~gp--~gG~l 268 (295)
++.+.++ |...| +++|.++|++||+++|+|++|. |.-..+. ... .-...|++++ .|.+++. +.|++
T Consensus 229 iiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~t-G~GrtG~~~a~~~~~i~pDiv~l--sK~lggG~~pigav 305 (474)
T PLN02624 229 LFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQT-GLARTGKMLACDWEEVRPDVVIL--GKALGGGVIPVSAV 305 (474)
T ss_pred EECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CcCcCcchhhHHhcCCCCCEEEe--cccccCCCCcceee
Confidence 8863333 44555 9999999999999999999986 3221111 000 0012687776 4988764 44888
Q ss_pred EEeCCchhhh
Q 022564 269 FFRKGVKEIN 278 (295)
Q Consensus 269 ~~~~~~~~~~ 278 (295)
++++++.+..
T Consensus 306 ~~~~~i~~~~ 315 (474)
T PLN02624 306 LADKDVMLCI 315 (474)
T ss_pred eecHHHHhHh
Confidence 8887765543
No 307
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=98.88 E-value=1.6e-08 Score=100.17 Aligned_cols=161 Identities=12% Similarity=0.070 Sum_probs=106.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhh-cC--CCCeEEEecCCCCcccCcccccccccccccee
Q 022564 91 DMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTAL-LK--PHDRIMALDLPHGGHLSHGYQTDTKKISAVSI 166 (295)
Q Consensus 91 ~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al-~~--~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~ 166 (295)
-+..-..+..++++.|.+.. +..+..+++ +..+++++. .. ++++|++++..|+........ -+...|.
T Consensus 108 Le~l~e~Qt~i~eLtGm~~a----NaSl~d~atA~aEa~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t----~a~~~g~ 179 (939)
T TIGR00461 108 LEALLNFQTVVSDLTGLPVA----NASLLDEGTAAAEAMALSFNVSKKKANKFFVAKDLHPQTKSVLHT----RAKPFGI 179 (939)
T ss_pred HHHHHHHHHHHHHHHCCChh----hhhccchhhHHHHHHHHHHHhhcCCCCEEEECCCCCcchHHHHHH----HHHhcCc
Confidence 33444577999999999875 667777777 333355554 33 448999999888777543321 1123343
Q ss_pred eeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCC-CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCC
Q 022564 167 FFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY-ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP 245 (295)
Q Consensus 167 ~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~-~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~ 245 (295)
++ +. +|++++++.+ ++.++++.+||+ |.+.|+++|.+++|++|.+++++.-..+..+......+
T Consensus 180 ~v--~~---------~~~~~l~~~~---~~~~v~~q~Pn~~G~ied~~~i~~~~h~~gal~~~~ad~~al~ll~~Pge~- 244 (939)
T TIGR00461 180 EV--IV---------VDCSDIKKAV---DVFGCLLQYPATDGSILDYKQLIDALHSHKSLVSVAADLMALTLLTPPGHY- 244 (939)
T ss_pred EE--EE---------EcHHHHhhcC---CEEEEEEECCCCCeEEecHHHHHHHHHHcCCEEEEEechHHhCCcCCHHHc-
Confidence 33 32 1445566554 467777876666 78889999999999999999996654333222221222
Q ss_pred CCcceEEEeCCCCCC-----CCCceEEEEEeCCchh
Q 022564 246 FEYADVVTTTTHKSL-----RGPRGAMIFFRKGVKE 276 (295)
Q Consensus 246 ~~~~D~~~~s~~K~l-----~gp~gG~l~~~~~~~~ 276 (295)
|+|+++++.+++. +||..|++.+++++..
T Consensus 245 --GaDi~vg~~q~fg~p~g~GGP~aG~~a~~~~l~r 278 (939)
T TIGR00461 245 --GADIVLGSSQRFGVPMGYGGPHAAFFAVKDEYNR 278 (939)
T ss_pred --CCcEEeeCCCccCCCCCCCCCceeeeeecHhhHh
Confidence 5999988887743 4888899999998654
No 308
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=98.86 E-value=8.6e-08 Score=85.70 Aligned_cols=159 Identities=16% Similarity=0.162 Sum_probs=109.5
Q ss_pred HHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhh-cC--CCCeEEEecCCCCcccCccccccccccccceeeeEEE
Q 022564 96 LCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTAL-LK--PHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETM 171 (295)
Q Consensus 96 ~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al-~~--~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v 171 (295)
+.+..++++.|.+-. +-..-.+++ +-.+++++. .. +.++++++...|+.+...... -++-.| ++++
T Consensus 124 efQtlv~dLTGm~VA----NASm~DeaTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~T----ra~~~g--~~i~ 193 (450)
T COG0403 124 EFQTLVADLTGLDVA----NASMLDEATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRT----RAEGLG--IEIE 193 (450)
T ss_pred HHHHHHHHHhCCCcc----cchhhhhHHHHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHHHh----hcccCc--eEEE
Confidence 367889999999874 666667777 444455554 33 368999999888887654321 111223 3333
Q ss_pred eeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCC-C-CccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCC-c
Q 022564 172 PYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY-A-RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE-Y 248 (295)
Q Consensus 172 ~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~-~-~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~-~ 248 (295)
.++.+ |.++++++ .+..+.++++.+||. | ...++++|.+.+|++|.++++=. ..+...+...|-. |
T Consensus 194 ~~~~~------d~~~l~~~-~~~~~~gv~vQyP~~~G~~~~d~~~l~~~~h~~~al~~v~a----DplaL~LL~pPGe~G 262 (450)
T COG0403 194 VVDAD------DLDDLESA-DDGDVFGVLVQYPNTFGIVEEDLRALIEAAHSAGALVIVAA----DPLALGLLKPPGEFG 262 (450)
T ss_pred Eeccc------hhhhhhhc-cccCeEEEEEecCCCCCccchhHHHHHHHHhhcCCEEEEEe----chhHhhccCCccccC
Confidence 32222 78888888 443778899987776 6 66779999999999999877522 2233333333333 7
Q ss_pred ceEEEeCCCC-----CCCCCceEEEEEeCCch
Q 022564 249 ADVVTTTTHK-----SLRGPRGAMIFFRKGVK 275 (295)
Q Consensus 249 ~D~~~~s~~K-----~l~gp~gG~l~~~~~~~ 275 (295)
+|+++++++- +|+||.-|++.+++++.
T Consensus 263 ADIvvG~~QrfGvPmgfGGPhag~fA~~~~~~ 294 (450)
T COG0403 263 ADIVVGSAQRFGVPMGFGGPHAGYFAVKDEFK 294 (450)
T ss_pred CceEEecCcccCCCcCCCCcceeeeeEhHhHh
Confidence 9999999986 66788889999999874
No 309
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=98.86 E-value=1.6e-08 Score=91.02 Aligned_cols=171 Identities=13% Similarity=0.156 Sum_probs=115.2
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhh---cCC--C---CeEEEecCCCCcccCcccccccc
Q 022564 89 YIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTAL---LKP--H---DRIMALDLPHGGHLSHGYQTDTK 159 (295)
Q Consensus 89 ~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al---~~~--g---d~Vl~~~~~~~~~~~~~~~~~~~ 159 (295)
....++.++-+.++++|+.+.+. .-..|+|++ +..+..... ... | ..++++...|.+ +..
T Consensus 117 ~~~~~e~~~Vnm~~~L~~~~~~~---~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a--------~eK 185 (491)
T KOG1383|consen 117 VVRKLEAECVNMIANLFNAPSDS---CGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAA--------FEK 185 (491)
T ss_pred hhHHHHHHHHHHHHHHhcCCccc---cCccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHH--------HHH
Confidence 35678888999999999998653 345567777 634333332 111 1 134444422222 222
Q ss_pred ccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCC--CCccCHHHHHHHHHH-cCCEEEEEccccccc
Q 022564 160 KISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY--ARLYDYERIRKVCNK-QKAIMLADMAHISGL 236 (295)
Q Consensus 160 ~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~--~~~~~l~~I~~ia~~-~~~~vivD~a~~~g~ 236 (295)
.+...+.+++.++ +++.++.+|+..+.+.+++ +|.+++...++. |...|+++|.++..+ +++.+++|++-+.-.
T Consensus 186 ~a~yf~v~l~~V~--~~~~~~~~D~~k~~~~i~e-Nti~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~~GgFi 262 (491)
T KOG1383|consen 186 AARYFEVELREVP--LDEGDYRVDPGKVVRMIDE-NTIMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDACLGGFI 262 (491)
T ss_pred HHhhEEEEEEeee--ccccceEecHHHHHHHhcc-ceEEEEEEcCCCCccchhhHHHHHHHHHHHhCCceeecccCcccc
Confidence 3344555555565 5656899999999999988 898888765555 589999999999988 999999999954333
Q ss_pred cc-cCC--CCCCC--CcceEEEeCCCCCCCCCce-EEEEEeCC
Q 022564 237 VA-AGV--IPSPF--EYADVVTTTTHKSLRGPRG-AMIFFRKG 273 (295)
Q Consensus 237 ~~-~~~--~~~~~--~~~D~~~~s~~K~l~gp~g-G~l~~~~~ 273 (295)
.+ ... ..+.| .++-.+..++||+-..|.| ++++.|.+
T Consensus 263 ~p~~~~~~~~fdFr~p~V~Sisa~~HKYGl~~~G~~~vl~r~k 305 (491)
T KOG1383|consen 263 NPAGYLNEEEFDFRVPGVTSISADGHKYGLAPAGSSWVLYRNK 305 (491)
T ss_pred ccccccCccccccCCCCceeEeeccceeeeeecCcEEEEEccc
Confidence 33 211 12222 2677899999998889999 88777765
No 310
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=98.85 E-value=9.3e-08 Score=84.76 Aligned_cols=211 Identities=19% Similarity=0.114 Sum_probs=112.9
Q ss_pred HcCceecCCCCCCCHHHHHHHhhhhhc---cC--CCCCCCCccc-CCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeC
Q 022564 46 WKGLELIPSENFTSVSVMQAVGSVMTN---KY--SEGYPGARYY-GGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSL 119 (295)
Q Consensus 46 ~~~i~L~~~~~~~~~~v~~al~~~l~~---~~--~~g~~~~~~~-~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~ 119 (295)
.+.++|+-+-+.|+++-.+--...+.- .+ .+| ...+.| |+..++.+++ +.+++++|++++ +|++.
T Consensus 22 a~~L~LdmtRGKPs~eQLdLS~~lL~~~~~~~~~~dG-~D~RNY~G~l~Gipe~r----~l~a~llgv~~~----~viv~ 92 (425)
T PF12897_consen 22 AKGLKLDMTRGKPSPEQLDLSNPLLDLPGSSDYLADG-TDCRNYPGGLDGIPEAR----ELFAELLGVPPE----NVIVG 92 (425)
T ss_dssp HTT--EES---S--HHHHHGGGGGGGSSTTCCBECTT-EBTTSS-S-SS--HHHH----HHHHHHHTS-GG----GEEE-
T ss_pred HcCCCcccCCCCCCHHHHhhhHHHhcCCCCccccCCC-ccccCCCCccCChHHHH----HHHHHHhCCCHH----HEEEe
Confidence 467778777777877766644433321 11 112 234678 8888888666 899999999997 88888
Q ss_pred CChHHHHH---HHHhhcC--C----------CCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCH
Q 022564 120 SGSPSNFQ---VYTALLK--P----------HDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDY 184 (295)
Q Consensus 120 sG~~a~~~---~~~al~~--~----------gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~ 184 (295)
.+++++++ +..+++. + .=+.|++.|-|.-|+..+. ..|.+...+| .. ...+|.
T Consensus 93 gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHFai~E--------~~Giemi~Vp--M~--~dGPDm 160 (425)
T PF12897_consen 93 GNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHFAITE--------HFGIEMIPVP--MT--EDGPDM 160 (425)
T ss_dssp SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHHHHHH--------HCT-EEEEEE--EE--TTEE-H
T ss_pred ccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHHHHHH--------hhCcEEEecC--CC--CCCCCH
Confidence 88773332 2333321 1 1268899987777776443 5665554444 54 346899
Q ss_pred HHHHHHHh-hcCCcEEEEc--CCCCC-CccCHHHHHHHH----HHcCCEEEEEccccccccccCCCC-C--C--------
Q 022564 185 DQLEKSAT-LFRPKLIVAG--ASAYA-RLYDYERIRKVC----NKQKAIMLADMAHISGLVAAGVIP-S--P-------- 245 (295)
Q Consensus 185 e~l~~~i~-~~~tk~i~l~--~~n~~-~~~~l~~I~~ia----~~~~~~vivD~a~~~g~~~~~~~~-~--~-------- 245 (295)
|.+|+++. +...|.|+.. ++|+. ....-+.+.++| ...+..|++|.|++..++..+... . .
T Consensus 161 D~Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNAY~vHhL~~~~~~~~~~nil~~~~~A 240 (425)
T PF12897_consen 161 DMVEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNAYAVHHLYDEEPRDALLNILDACAKA 240 (425)
T ss_dssp HHHHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-TTTT-BSSSSSS------HHHHHHHT
T ss_pred HHHHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecCceEeeccccccchhhhHHHHHHHHc
Confidence 99999985 3467888874 78883 444444444444 457999999999988887432211 1 1
Q ss_pred -CCcceEEEeCCCCCCCCCce-EEEEEeCCchhh
Q 022564 246 -FEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEI 277 (295)
Q Consensus 246 -~~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~ 277 (295)
-...-+++.|++|--....| +++..+....+.
T Consensus 241 Gnpdrv~~F~STSKITf~GaGva~~aaS~~Nl~~ 274 (425)
T PF12897_consen 241 GNPDRVYVFASTSKITFPGAGVAFFAASEANLAW 274 (425)
T ss_dssp T-TTSEEEEEESTTTS-TTSS-EEEEE-HHHHHH
T ss_pred CCCCeEEEEecccccccCCcceeeeecCHHHHHH
Confidence 01244889999994333345 888888775443
No 311
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=98.84 E-value=5.2e-09 Score=89.51 Aligned_cols=206 Identities=13% Similarity=0.169 Sum_probs=132.7
Q ss_pred CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHH-HHHhhcCC
Q 022564 57 FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQ-VYTALLKP 135 (295)
Q Consensus 57 ~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~-~~~al~~~ 135 (295)
.+|..+.+.|.+.+.. |..-.....+-|..++. ...+-+-..++.+.|+..+ +|.+.+.-+++++ ++.++.+|
T Consensus 78 LmPK~t~~~~~~eLDk-Wak~av~gH~~GkvPW~-~~De~il~l~~~iVGA~e~----EvavmNsLTvNlh~Ll~sFyKP 151 (465)
T KOG3846|consen 78 LMPKSTRNSINAELDK-WAKCAVEGHFKGKVPWV-SIDEPILPLLAPIVGAQEN----EVAVMNSLTVNLHSLLISFYKP 151 (465)
T ss_pred cCchhhHhHHHHHHHH-HHhhhhhccccccccee-ecchhhhhhhhhhccCCch----hhhhHhhhhhHHHHHHHHhcCC
Confidence 5788888888887765 31110001111111111 1112244788899999775 6777777776555 55667776
Q ss_pred CC---eEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCC--CCCCHHHHHHHHhhcC--CcEEEEcCCCC--
Q 022564 136 HD---RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNEST--GYIDYDQLEKSATLFR--PKLIVAGASAY-- 206 (295)
Q Consensus 136 gd---~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~--~~id~e~l~~~i~~~~--tk~i~l~~~n~-- 206 (295)
.. +|+. +..++.+.-|..+. .+++.|+.++-.-+.+.+.. ..+..+++.+.|+.+. ..+|+++...+
T Consensus 152 TekR~KILl---E~kaFPSDhYAies-Q~~lhG~~~e~sm~~iePREGEetlRteDILd~IEkngDeiA~v~fSGvqyYT 227 (465)
T KOG3846|consen 152 TEKRFKILL---EKKAFPSDHYAIES-QCKLHGISPENSMIQIEPREGEETLRTEDILDTIEKNGDEIALVCFSGVQYYT 227 (465)
T ss_pred cchhhhhhh---ccCCCCchHHHHHh-hhhhcCCChHHheEEecccccccchhHHHHHHHHHhcCCeEEEEEeecceeec
Confidence 54 4664 44444444444333 44566654333222233333 3677888888887533 34444554444
Q ss_pred CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCC-CCce-EEEEEeCCch
Q 022564 207 ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLR-GPRG-AMIFFRKGVK 275 (295)
Q Consensus 207 ~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~-gp~g-G~l~~~~~~~ 275 (295)
|+..++.+|...-+..|++|=.|-||+.|.++.-++.++ +|+.+++.+|+++ |+.| |.++++.+..
T Consensus 228 GQ~Fdi~aIT~Agq~kgc~VGfDLAHAvgNVpL~LHdWg---VDFACWCSYKYlnaGaGgIgGlFvHekh~ 295 (465)
T KOG3846|consen 228 GQYFDIGAITFAGQFKGCLVGFDLAHAVGNVPLQLHDWG---VDFACWCSYKYLNAGAGGIGGLFVHEKHT 295 (465)
T ss_pred ccccchhhhhhcccCCCcEechhhhhhhcCCceEEeecC---CceEEEeeecccccCCCccceeeeehhhh
Confidence 688999999976677899999999999999999888888 9999999999996 5566 8888887754
No 312
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.84 E-value=5.9e-08 Score=85.61 Aligned_cols=200 Identities=20% Similarity=0.216 Sum_probs=133.0
Q ss_pred cCceecCCCCC----CCHHHHHHHhhhhhccCCCCCCCCc-ccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCC
Q 022564 47 KGLELIPSENF----TSVSVMQAVGSVMTNKYSEGYPGAR-YYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSG 121 (295)
Q Consensus 47 ~~i~L~~~~~~----~~~~v~~al~~~l~~~~~~g~~~~~-~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG 121 (295)
+.+|+ ++.|+ -.+++.+.....+.+ |.-|.++.+ +|+...-.-.++ +.+++++|++. .|+..-|
T Consensus 95 ~~~N~-aS~NfL~l~~~~~ike~a~~~lrk-yGvGsCGPrGFYGt~DvHldlE----~~iakF~G~E~-----aivYs~g 163 (467)
T KOG1358|consen 95 DVLNF-ASANFLGLIENEEIKEEASFTLRK-YGVGSCGPRGFYGTIDVHLDLE----KRIAKFMGTED-----AIVYSYG 163 (467)
T ss_pred eeecc-cchhhhhhcccHHHHHHHHHHHHH-hCCCCcCCCcccccceeecccH----HHHHHhhCCcc-----eeeeccc
Confidence 34554 34444 377888888887877 766766654 455443333344 89999999986 7899899
Q ss_pred hHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhc------C
Q 022564 122 SPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF------R 195 (295)
Q Consensus 122 ~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~------~ 195 (295)
-+++..++.++.+.||-|.+.. .......+++++..-.. ..+. ..|.++++..+.+. +
T Consensus 164 F~ti~S~ipafsKrGDIi~~de--------~~nfaIq~GlqlSRS~i--~~Fk------hndm~~lerll~E~~~~~~K~ 227 (467)
T KOG1358|consen 164 FSTIESAIPAFSKRGDIIFVDE--------AVNFAIQKGLQLSRSTI--SYFK------HNDMEDLERLLPEQEDEDQKN 227 (467)
T ss_pred cchhhhcchhhhccCcEEEEeh--------hhhHHHHHHHhhhhhee--EEec------CCCHHHHHHhccCcchhhhhc
Confidence 8866669999999999888776 22222222444443222 2111 34677777665320 1
Q ss_pred -----Cc-EEEE-c-CCCCCCccCHHHHHHHHHHcCCEEEEEcccccccccc---CC---CCCCCCcceEEEeCCCCCCC
Q 022564 196 -----PK-LIVA-G-ASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAA---GV---IPSPFEYADVVTTTTHKSLR 261 (295)
Q Consensus 196 -----tk-~i~l-~-~~n~~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~---~~---~~~~~~~~D~~~~s~~K~l~ 261 (295)
|+ .|++ + ..|+|.+.|+.+|.++..+|...+|.|++.++|.... ++ +..+....|++++|..-.+
T Consensus 228 ~k~~~~Rrfiv~EGl~~N~g~i~pl~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~al- 306 (467)
T KOG1358|consen 228 PKKALTRRFIVVEGLYANTGDICPLPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETAL- 306 (467)
T ss_pred cccccceEEEEEEeeccCCCcccccHHHHHHHhhheEEEEEecccccccccccCccccccCCCCccceeeeeecccccc-
Confidence 12 3333 3 8888999999999999999999999999999988764 21 1122335899999998776
Q ss_pred CCceEEEEEeCCc
Q 022564 262 GPRGAMIFFRKGV 274 (295)
Q Consensus 262 gp~gG~l~~~~~~ 274 (295)
+-.||+..++.-+
T Consensus 307 as~GgFc~G~~~i 319 (467)
T KOG1358|consen 307 ASGGGFCAGKSFI 319 (467)
T ss_pred cccCceeecceee
Confidence 4466777775443
No 313
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=98.83 E-value=1.3e-07 Score=85.56 Aligned_cols=206 Identities=16% Similarity=0.106 Sum_probs=127.0
Q ss_pred cCceecCCCCC-----CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCC
Q 022564 47 KGLELIPSENF-----TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSG 121 (295)
Q Consensus 47 ~~i~L~~~~~~-----~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG 121 (295)
+.|++..+-.+ .+|.|.+|+.+.+.+....|.|+ ++|-++.+.+.+++..-. .|.|++.
T Consensus 54 ~YIDy~~~~Gp~ilGH~~p~V~~Av~~~l~~G~~fg~Pt-----------e~Ei~~Aell~~~~p~~e-----~vrfvnS 117 (432)
T COG0001 54 EYIDYVLGWGPLILGHAHPAVVEAVQEQLERGLSFGAPT-----------ELEVELAELLIERVPSIE-----KVRFVNS 117 (432)
T ss_pred EeeehhccCcccccCCCCHHHHHHHHHHHHhcCCCCCCC-----------HHHHHHHHHHHHhcCccc-----EEEEecc
Confidence 45666555554 37889999999998855434333 344447788888887632 4556555
Q ss_pred hH-HHHHHHHhh--cCCCCeEEEecCCCCcccCcccccccccc------ccceee----eEEEeeecCCCCCCCCHHHHH
Q 022564 122 SP-SNFQVYTAL--LKPHDRIMALDLPHGGHLSHGYQTDTKKI------SAVSIF----FETMPYRLNESTGYIDYDQLE 188 (295)
Q Consensus 122 ~~-a~~~~~~al--~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~------~~~g~~----~~~v~~~~~~~~~~id~e~l~ 188 (295)
.| |.+.+++.. ....|+|+.+.-.|.++......-...++ ...|.. -..+.++. -|++.++
T Consensus 118 GTEAtmsAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~y------ND~~al~ 191 (432)
T COG0001 118 GTEATMSAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPY------NDLEALE 191 (432)
T ss_pred hhHHHHHHHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecC------CCHHHHH
Confidence 44 877666544 45678999999888877543332111010 011100 01111112 2899999
Q ss_pred HHHhhc--CCcEEEEc--CCCCC----CccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCC-cceEEEeCCCCC
Q 022564 189 KSATLF--RPKLIVAG--ASAYA----RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE-YADVVTTTTHKS 259 (295)
Q Consensus 189 ~~i~~~--~tk~i~l~--~~n~~----~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~-~~D~~~~s~~K~ 259 (295)
+++++. +..+|++- ..|.| ...-++.|.++|++||+++|.|+....--+..+-...-+. ..|+. +..|-
T Consensus 192 ~~~~~~g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gGaq~~~gi~PDlt--tlGKi 269 (432)
T COG0001 192 EAFEEYGDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGGAQGYYGVEPDLT--TLGKI 269 (432)
T ss_pred HHHHHcCCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCcccccccCcCcchh--hhhhh
Confidence 999864 56778874 55544 4445889999999999999999996533333211110000 15554 56798
Q ss_pred CCCCce-EEEEEeCCchh
Q 022564 260 LRGPRG-AMIFFRKGVKE 276 (295)
Q Consensus 260 l~gp~g-G~l~~~~~~~~ 276 (295)
++|.-- |++-+|+++.+
T Consensus 270 IGGGlP~ga~gGr~eiM~ 287 (432)
T COG0001 270 IGGGLPIGAFGGRAEIME 287 (432)
T ss_pred hcCCcceeeeccHHHHHh
Confidence 876544 89999998766
No 314
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=98.83 E-value=1.5e-07 Score=85.49 Aligned_cols=192 Identities=11% Similarity=0.090 Sum_probs=108.4
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhh-cCCC
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTAL-LKPH 136 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al-~~~g 136 (295)
-.|++.+++.+.+.+... .+. .+. + +...++.+.++++.+.+. -++..||+.|+.+++... ...|
T Consensus 41 ~~p~v~~ai~~ql~~~~~---~~~-~~~-~----~~~~~la~~l~~~~~~~~-----v~~~~SGseA~e~Alklar~~~g 106 (364)
T PRK04013 41 NHPEWVEEMSEQLEKLVV---AGP-MFE-H----EEKEEMLEELSKWVNYEY-----VYMGNSGTEAVEAALKFARLYTG 106 (364)
T ss_pred CCHHHHHHHHHHHHhcCC---ccC-CcC-C----HHHHHHHHHHHhhcCCCE-----EEEeCchHHHHHHHHHHHHHHhC
Confidence 468899999988876221 111 111 1 222335577777776542 455566666877666654 3344
Q ss_pred -CeEEEecCCCCcccCccccccccccccceee---eEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEc-CCCC-C-Cc
Q 022564 137 -DRIMALDLPHGGHLSHGYQTDTKKISAVSIF---FETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASAY-A-RL 209 (295)
Q Consensus 137 -d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~---~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~-~~n~-~-~~ 209 (295)
++|+.+...|.+........-.......+.. ....+++ ..|++.+++.+.+ ++++|++. .... | ..
T Consensus 107 r~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~------~~d~~~l~~~i~~-~~aAvivEpi~g~gG~~~ 179 (364)
T PRK04013 107 RKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIP------FNDVEAAKEAITK-ETAAVIFEPIQGEGGIVP 179 (364)
T ss_pred CCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEec------CCCHHHHHHHhcC-CcEEEEEcCCcCCCCCcC
Confidence 8999988777665322211100000000000 0001111 1278899998876 88888885 2222 2 33
Q ss_pred cC---HHHHHHHHHHcCCEEEEEccccccccccCC-CCCC-CC-cceEEEeCCCCCCCCCc-eEEEEEeCCc
Q 022564 210 YD---YERIRKVCNKQKAIMLADMAHISGLVAAGV-IPSP-FE-YADVVTTTTHKSLRGPR-GAMIFFRKGV 274 (295)
Q Consensus 210 ~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~-~~~~-~~-~~D~~~~s~~K~l~gp~-gG~l~~~~~~ 274 (295)
.| +++|.++|++||+++|.|+++. |. ..+. .... +. ..|++++ .|.++|.- -|.++.+.++
T Consensus 180 ~~~~yl~~lr~lc~~~gillI~DEv~t-G~-RtG~~~a~~~~gv~PDiv~~--gK~lggG~P~~a~~~~~~~ 247 (364)
T PRK04013 180 AKEEFVKTLRDLTEDVGALLIADEVQS-GL-RTGKFLAIEHYKVEPDIVTM--GKGIGNGVPVSLTLTNFDV 247 (364)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEechhh-cC-CCCchhHHHhcCCCCCEEEe--cccccCCceeEEEEecccc
Confidence 34 9999999999999999999986 33 3221 1000 11 2677776 78886532 2666677665
No 315
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=98.81 E-value=7.3e-08 Score=89.09 Aligned_cols=199 Identities=15% Similarity=0.169 Sum_probs=110.9
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhc----
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALL---- 133 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~---- 133 (295)
-.|++.+++.+.+.+....+ .. +. + ....++.+.++++++.+. .++++||+.|+.+++....
T Consensus 56 ~~p~v~~A~~~~~~~~~~~~---~~-~~-~----~~~~~la~~l~~~~~~~~-----v~~~~sGseA~e~Alk~ar~~~~ 121 (406)
T PRK12381 56 AHPALREALNEQASKFWHTG---NG-YT-N----EPVLRLAKKLIDATFADR-----VFFCNSGAEANEAALKLARKYAH 121 (406)
T ss_pred CCHHHHHHHHHHHhhccccc---Cc-cC-C----HHHHHHHHHHHhhCCCCe-----EEEcCCcHHHHHHHHHHHHHHHh
Confidence 47899999999886522111 10 11 1 122235577777765431 3455566668876666531
Q ss_pred ----CCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCC-CCCCCCHHHHHHHHhhcCCcEEEEcCCCC--
Q 022564 134 ----KPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE-STGYIDYDQLEKSATLFRPKLIVAGASAY-- 206 (295)
Q Consensus 134 ----~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~id~e~l~~~i~~~~tk~i~l~~~n~-- 206 (295)
..+.+|+..+..|.+.......+-... .... .+ .+++... ...-.|++++++.+++ ++++|++.+.+.
T Consensus 122 ~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~-~~~~-~~--~~~~~~~~~~~~~d~~~l~~~l~~-~~aaviiEPv~~~g 196 (406)
T PRK12381 122 DRYGSHKSGIVAFKNAFHGRTLFTVSAGGQP-KYSQ-DF--APLPPDIRHAAYNDLNSASALIDD-QTCAVIVEPIQGEG 196 (406)
T ss_pred hcCCCCCCeEEEECCCcCCcchhHHhhcCCc-cccc-CC--CCCCCCeeEeCCCCHHHHHHhccC-CeeEEEEeCCcCCC
Confidence 245778888876666532111100000 0000 00 0000000 0012478999999976 888888863222
Q ss_pred C----CccCHHHHHHHHHHcCCEEEEEccccccccccCCC-CC-CCC-cceEEEeCCCCCCC-CCceEEEEEeCCchhhh
Q 022564 207 A----RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI-PS-PFE-YADVVTTTTHKSLR-GPRGAMIFFRKGVKEIN 278 (295)
Q Consensus 207 ~----~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~-~~-~~~-~~D~~~~s~~K~l~-gp~gG~l~~~~~~~~~~ 278 (295)
+ ....+++|.++|++||+++|+|++| .|....+.. .. .+. ..|+ .+..|.++ |.+-|++++++++.+..
T Consensus 197 g~~~~~~~~l~~l~~l~~~~~~llI~DEv~-tG~gr~G~~~~~~~~~v~pDi--~t~sK~l~gG~~ig~~~~~~~~~~~~ 273 (406)
T PRK12381 197 GVIPADKAFLQGLRELCDRHNALLIFDEVQ-TGVGRTGELYAYMHYGVTPDV--LTTAKALGGGFPIGAMLTTEKCASVM 273 (406)
T ss_pred CCcCCCHHHHHHHHHHHHHcCCEEEEcchh-hCCCCCcchhhhHhhCCCCCE--EEehhhhhCCCceEEEEEcHHHHhhc
Confidence 2 3566889999999999999999998 443222211 00 000 2565 46789884 44458888888876544
No 316
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=98.73 E-value=3.6e-07 Score=83.53 Aligned_cols=195 Identities=12% Similarity=0.115 Sum_probs=105.5
Q ss_pred CHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEe-CCChHHHHHHHHhh--cCC
Q 022564 59 SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQS-LSGSPSNFQVYTAL--LKP 135 (295)
Q Consensus 59 ~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~-~sG~~a~~~~~~al--~~~ 135 (295)
.|++++++.+.+.... .++. .....++ ..+++.+...++. .+++ .||+.++..++... ..+
T Consensus 46 ~p~v~~a~~~~~~~~~--~~~~-------~~~~~~~----~~la~~l~~~~~~---~~~~~~SGseA~~~Al~~ar~~~~ 109 (375)
T PRK04260 46 HPQVQQALQKQAGLIW--HSPN-------LYLNSLQ----EEVAQKLIGDKDY---LAFFCNSGAEANEAAIKIARKATG 109 (375)
T ss_pred CHHHHHHHHHHHHhcC--cccC-------ccCCHHH----HHHHHHHhcCcCC---EEEEcCccHHHHHHHHHHHHHhcC
Confidence 7889999999886522 1111 1112333 3444433222321 3344 45555877666654 345
Q ss_pred CCeEEEecCCCCcccCcccccc-ccc-cccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCC--CCcc-
Q 022564 136 HDRIMALDLPHGGHLSHGYQTD-TKK-ISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY--ARLY- 210 (295)
Q Consensus 136 gd~Vl~~~~~~~~~~~~~~~~~-~~~-~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~--~~~~- 210 (295)
+++|++.+..|.+......... ... ....+.....++. . ...|++++++.+.+ ++++|++.+.++ |...
T Consensus 110 ~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~dl~~l~~~l~~-~~a~vi~e~v~~~~G~~~~ 183 (375)
T PRK04260 110 KQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSY--A---IFNDLNSVKALVNK-NTAAVMLELVQGESGVLPA 183 (375)
T ss_pred CCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEE--e---CCCCHHHHHHhcCC-CeEEEEECCeECCCCCcCC
Confidence 6788888766554321111100 000 0000000000110 0 02489999998865 777888863333 3333
Q ss_pred ---CHHHHHHHHHHcCCEEEEEccccccccccCCC-CCCCC--cceEEEeCCCCCCC-CCceEEEEEeCCchhhh
Q 022564 211 ---DYERIRKVCNKQKAIMLADMAHISGLVAAGVI-PSPFE--YADVVTTTTHKSLR-GPRGAMIFFRKGVKEIN 278 (295)
Q Consensus 211 ---~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~-~~~~~--~~D~~~~s~~K~l~-gp~gG~l~~~~~~~~~~ 278 (295)
.+++|.++|+++|+++|+|++|. |....+.. ..... ..|++ +++|.|+ |-+.|++++++++.+..
T Consensus 184 ~~~~l~~~~~l~~~~~~~~i~De~~~-g~g~~g~~~~~~~~~~~pdi~--t~sK~l~~G~~ig~~~~~~~~~~~~ 255 (375)
T PRK04260 184 DKDFVKALADYCQETGILLIVDEVQT-GMGRTGKLYAFEHYGIEPDIF--TLAKGLANGVPVGAMLAKSSLGGAF 255 (375)
T ss_pred CHHHHHHHHHHHHHcCCEEEEechhh-CCCcccchhhhHhhCCCCCEE--EecccccCCcceEEEEEcHHHHhhc
Confidence 38999999999999999999985 43322211 10010 25644 7899986 33558999988765543
No 317
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=98.72 E-value=1.3e-07 Score=85.11 Aligned_cols=179 Identities=17% Similarity=0.154 Sum_probs=113.9
Q ss_pred cCCcchHHHHHHHHHHHHHHHcCCCCCC------cceeEEeCCChHHHHH-HHHhh------cCCCC-----------e-
Q 022564 84 YGGNEYIDMAESLCQKRALEAFRLDPEK------WGVNVQSLSGSPSNFQ-VYTAL------LKPHD-----------R- 138 (295)
Q Consensus 84 ~~~~~~~~~l~~~~~~~la~~~g~~~~~------~~~~v~~~sG~~a~~~-~~~al------~~~gd-----------~- 138 (295)
+..++...+||..+.+|++++++++... -+-.|+.++.+.+.+. ++.+- ++.+. -
T Consensus 105 W~ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV 184 (511)
T KOG0628|consen 105 WASSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARLV 184 (511)
T ss_pred eecCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhhe
Confidence 4466788999999999999999874210 0124566555553332 22221 12221 1
Q ss_pred EEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCc-----EEEEc--CCCCCCccC
Q 022564 139 IMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPK-----LIVAG--ASAYARLYD 211 (295)
Q Consensus 139 Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk-----~i~l~--~~n~~~~~~ 211 (295)
+..++..|.+.- +++.+.+.+.+.++ .+ +++.++.+.|++++++...+ .++.+ .++.....+
T Consensus 185 ~Y~SDqahssve--------ka~~i~~VklR~l~--td-~n~~mr~~~L~~AIe~D~arGlIPf~v~at~GTT~~ca~D~ 253 (511)
T KOG0628|consen 185 AYCSDQAHSSVE--------KACLIAGVKLRALP--TD-ENFGMRGDTLRKAIEEDIARGLIPFFVCATLGTTSSCAFDE 253 (511)
T ss_pred EEecCcccchHH--------HhHhhcceeEEEee--cc-cCcCCCHHHHHHHHHHHHhCCCccEEEEEeecCcccccccc
Confidence 233343333332 24446676665554 55 47899999999999763322 23334 333347889
Q ss_pred HHHHHHHHHHcCCEEEEEccccccccccC---CCCCCCCcceEEEeCCCCCCCCCce-EEEEEeCC
Q 022564 212 YERIRKVCNKQKAIMLADMAHISGLVAAG---VIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKG 273 (295)
Q Consensus 212 l~~I~~ia~~~~~~vivD~a~~~g~~~~~---~~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~ 273 (295)
+.+|..+|+++|+|+++|+|++....... ....++..+|.+.+.+|||+..--- ..++++++
T Consensus 254 l~elg~Vc~~~glWLHVDAAYAGsa~iCpE~r~l~rGie~aDSfn~n~hK~~~vnfDCs~lWvkd~ 319 (511)
T KOG0628|consen 254 LEELGPVCREEGLWLHVDAAYAGSAFICPEFRYLMRGIEYADSFNFNPHKWLLVNFDCSPLWVKDG 319 (511)
T ss_pred HHHhcchhhhcCEEEEeehhhccccccCHHHHHHhhcchhhccccCChhheeEEeeeeecceeecC
Confidence 99999999999999999999653333221 1223445699999999999876555 77888777
No 318
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.69 E-value=3.3e-07 Score=85.20 Aligned_cols=204 Identities=13% Similarity=0.065 Sum_probs=108.7
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEe-CCChHHHHHHHHhhc---
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQS-LSGSPSNFQVYTALL--- 133 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~-~sG~~a~~~~~~al~--- 133 (295)
-.|++.+++.+.+.+.. ..... .+. .+...++.+.+.+.+....+ .++| +||+.|+.+++....
T Consensus 59 ~~p~v~~ai~~q~~~~~-~~~~~--~~~-----~~~~~~la~~l~~~~p~~~~----~v~f~~sGseA~e~A~klar~~~ 126 (423)
T PRK05964 59 NHPYIDQAIREQLDRLD-HVIFA--GFT-----HEPAERLAQRLVALTPGGLD----HVFFSDSGSVAVEVALKMALQYW 126 (423)
T ss_pred CCHHHHHHHHHHHhhCC-Ccccc--ccC-----CHHHHHHHHHHHHhCCCCCC----EEEEeCCcHHHHHHHHHHHHHHH
Confidence 47899999988876521 00000 011 12233355777777642222 4555 555557776655431
Q ss_pred -----CCCCeEEEecCCCCcccCccccccccccc---cce--eeeEEEeeecCCCCCCCCHHHHHHHHhh--cCCcEEEE
Q 022564 134 -----KPHDRIMALDLPHGGHLSHGYQTDTKKIS---AVS--IFFETMPYRLNESTGYIDYDQLEKSATL--FRPKLIVA 201 (295)
Q Consensus 134 -----~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~---~~g--~~~~~v~~~~~~~~~~id~e~l~~~i~~--~~tk~i~l 201 (295)
....+|+.....|.+.............. ..+ .....++++.. +....+++++++.+.+ .++.+|++
T Consensus 127 ~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~l~~~l~~~~~~iaavi~ 205 (423)
T PRK05964 127 RNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPD-GYEQATLDALEALLEKHAGEIAAFIV 205 (423)
T ss_pred HhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcc-hhHHHHHHHHHHHHHhCCCcEEEEEE
Confidence 13457888887776643221111100000 000 01222333211 1112237888888853 24556666
Q ss_pred cC--CCC-C----CccCHHHHHHHHHHcCCEEEEEccccccccccCC----CCCCCCcceEEEeCCCCCCCCC--ceEEE
Q 022564 202 GA--SAY-A----RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGV----IPSPFEYADVVTTTTHKSLRGP--RGAMI 268 (295)
Q Consensus 202 ~~--~n~-~----~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~----~~~~~~~~D~~~~s~~K~l~gp--~gG~l 268 (295)
.+ ... | ....+++|.++|++||+++|+|++|. |....+. ...+. ..|++++ .|+|+|+ +.|++
T Consensus 206 Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~t-g~gr~G~~~a~~~~~v-~pDi~~~--~K~l~gG~~p~~av 281 (423)
T PRK05964 206 EPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIAT-GFGRTGTLFACEQAGV-SPDIMCL--SKGLTGGYLPLAAT 281 (423)
T ss_pred ecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhh-CCCcCcchhHHHhcCC-CCCeeee--ehhhhcCcccceEE
Confidence 43 222 2 34458899999999999999999984 3222121 11110 2677655 5999765 33778
Q ss_pred EEeCCchhhh
Q 022564 269 FFRKGVKEIN 278 (295)
Q Consensus 269 ~~~~~~~~~~ 278 (295)
++++++.+..
T Consensus 282 ~~~~~i~~~~ 291 (423)
T PRK05964 282 LCTAEIFEAF 291 (423)
T ss_pred EEcHHHHHhh
Confidence 8888876643
No 319
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=98.69 E-value=3.8e-07 Score=84.83 Aligned_cols=208 Identities=15% Similarity=0.098 Sum_probs=117.1
Q ss_pred cCceecCCCC-----CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCC
Q 022564 47 KGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSG 121 (295)
Q Consensus 47 ~~i~L~~~~~-----~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG 121 (295)
+.+++..+.. ..+|.+.+++.+.+.+.. . ++... .....+.+++.+++. ..+ .++++++
T Consensus 51 ~~lD~~~g~~~~~lGh~~p~i~~a~~~~~~~~~--~-----~~~~~----~~~~~la~~L~~~~~-~~~----~v~~~~s 114 (426)
T PRK00062 51 EYIDYVGSWGPMILGHAHPEVVEAVIEAAEKGL--S-----FGAPT----ELEVELAELVIELVP-SIE----MVRMVNS 114 (426)
T ss_pred EEEEcccchhhhhcCCCCHHHHHHHHHHHHhCC--c-----CCCCC----HHHHHHHHHHHHhCC-CCC----EEEEecC
Confidence 4577765532 358999999999887621 1 11111 222335577776653 233 4555555
Q ss_pred hH-HHHHHHHhhc--CCCCeEEEecCCCCcccCccccccc-----cccccceeeeEEE---eeecCCCCCCCCHHHHHHH
Q 022564 122 SP-SNFQVYTALL--KPHDRIMALDLPHGGHLSHGYQTDT-----KKISAVSIFFETM---PYRLNESTGYIDYDQLEKS 190 (295)
Q Consensus 122 ~~-a~~~~~~al~--~~gd~Vl~~~~~~~~~~~~~~~~~~-----~~~~~~g~~~~~v---~~~~~~~~~~id~e~l~~~ 190 (295)
++ |+..++.... ..+++|+..+..|.+.......... .+....+.....+ .+... ..|++++++.
T Consensus 115 GseA~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~d~~~l~~~ 190 (426)
T PRK00062 115 GTEATMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAP----YNDLEAVEEL 190 (426)
T ss_pred HHHHHHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEcC----CCCHHHHHHH
Confidence 55 8887776643 3467899999888776411111000 0000011000000 00011 1378999988
Q ss_pred Hhh--cCCcEEEEc--CCCCCCccC----HHHHHHHHHHcCCEEEEEccccccccccCCC---CCCCCcceEEEeCCCCC
Q 022564 191 ATL--FRPKLIVAG--ASAYARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGVI---PSPFEYADVVTTTTHKS 259 (295)
Q Consensus 191 i~~--~~tk~i~l~--~~n~~~~~~----l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~---~~~~~~~D~~~~s~~K~ 259 (295)
++. .++++|++. .++.|...+ +++|.++|++||+++|+|++|. |....... ..+. ..|+ .+..|.
T Consensus 191 i~~~~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~-G~r~g~~~~~~~~~~-~pDi--~~~gK~ 266 (426)
T PRK00062 191 FEEYGDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMT-GFRVALGGAQGYYGV-TPDL--TTLGKI 266 (426)
T ss_pred HHhCCCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechh-ccccCCccHHHHhCC-Ccch--HhhhhH
Confidence 853 256677775 444455555 8999999999999999999986 44221111 0110 1464 456798
Q ss_pred CCC-CceEEEEEeCCchhhh
Q 022564 260 LRG-PRGAMIFFRKGVKEIN 278 (295)
Q Consensus 260 l~g-p~gG~l~~~~~~~~~~ 278 (295)
+++ .+.|++++++++.+..
T Consensus 267 l~~G~p~ga~~~~~~i~~~~ 286 (426)
T PRK00062 267 IGGGLPVGAFGGRREIMEQL 286 (426)
T ss_pred hhCCCcceeeeEHHHHHHhh
Confidence 864 3457778888766543
No 320
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=98.63 E-value=1.1e-06 Score=81.70 Aligned_cols=210 Identities=14% Similarity=0.025 Sum_probs=107.5
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhh--cCC
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTAL--LKP 135 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al--~~~ 135 (295)
-+|++.+++.+.+.+ ....+.. .+ .+. .. .++.+.+.+..+.+... ..++.+||+.|+..++... ...
T Consensus 58 ~~~~i~~a~~~~~~~-~~~~~~~--~~-~~~--~~--~~la~~l~~~~~~~~~~--~~~f~~sGsea~e~Alklar~~~~ 127 (425)
T PRK08088 58 LHPKVVAAVEAQLKK-LSHTCFQ--VL-AYE--PY--LELCEKMNQKVPGDFAK--KTLLVTTGSEAVENAVKIARAATK 127 (425)
T ss_pred CCHHHHHHHHHHHhh-CCCcccc--cc-CCH--HH--HHHHHHHHHhCCCCCCC--EEEEeCCcHHHHHHHHHHHHHHhC
Confidence 388999999988875 2111100 00 111 11 23556777766643211 1567788888665444433 233
Q ss_pred CCeEEEecCCCCcccCccccc------cccccccceeeeEEEeeecCCCCCCC--CHHHHHHHHh----hcCCcEEEEc-
Q 022564 136 HDRIMALDLPHGGHLSHGYQT------DTKKISAVSIFFETMPYRLNESTGYI--DYDQLEKSAT----LFRPKLIVAG- 202 (295)
Q Consensus 136 gd~Vl~~~~~~~~~~~~~~~~------~~~~~~~~g~~~~~v~~~~~~~~~~i--d~e~l~~~i~----~~~tk~i~l~- 202 (295)
...|+...+.|.+........ +..+....-..+..++++.+..+... +++++++.++ ..+.+++++.
T Consensus 128 r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~aavi~Ep 207 (425)
T PRK08088 128 RSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGVSEDDAIASIERIFKNDAAPEDIAAIIIEP 207 (425)
T ss_pred CCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCccccCccHHHHHHHHHHHHHhccCCCceEEEEECc
Confidence 455777777666553211111 00000000000111222222111111 1566888875 2256677774
Q ss_pred -CCCCCCcc----CHHHHHHHHHHcCCEEEEEccccccccccC-CCCCCCCcceEEEeCCCCCCC-CCceEEEEEeCCch
Q 022564 203 -ASAYARLY----DYERIRKVCNKQKAIMLADMAHISGLVAAG-VIPSPFEYADVVTTTTHKSLR-GPRGAMIFFRKGVK 275 (295)
Q Consensus 203 -~~n~~~~~----~l~~I~~ia~~~~~~vivD~a~~~g~~~~~-~~~~~~~~~D~~~~s~~K~l~-gp~gG~l~~~~~~~ 275 (295)
..+.|... .+++|.++|++||+++|+|+++. |....+ .......+.+.-+.++.|.++ |.+-|++++++++.
T Consensus 208 i~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~-g~g~~g~~~~~~~~~~~pdi~s~sK~l~~G~rig~v~~~~~~~ 286 (425)
T PRK08088 208 VQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQT-GAGRTGTLFAMEQMGVAADLTTFAKSIAGGFPLAGVTGRAEVM 286 (425)
T ss_pred ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCcchhHHhhcCCCCCEEEEeccccCCCcceeeEecHHHH
Confidence 33333333 48899999999999999999977 321111 111000112222577799885 33349999988876
Q ss_pred hhh
Q 022564 276 EIN 278 (295)
Q Consensus 276 ~~~ 278 (295)
+..
T Consensus 287 ~~~ 289 (425)
T PRK08088 287 DAI 289 (425)
T ss_pred hhc
Confidence 544
No 321
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=98.63 E-value=1.7e-06 Score=80.56 Aligned_cols=196 Identities=14% Similarity=0.077 Sum_probs=106.0
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEe-CCChHHHHHHHHhh---c
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQS-LSGSPSNFQVYTAL---L 133 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~-~sG~~a~~~~~~al---~ 133 (295)
-.|.|.+++.+.+.+.. ... .++ . .+....+.+.+.+++....+ .++| +||+.|+.+++... .
T Consensus 92 ~hp~v~~Av~~ql~~l~---~~~-~~~-~----~~~~~~lAe~L~~~~p~~~~----~v~f~~SGsEA~e~AlklAr~~t 158 (442)
T TIGR03372 92 RNPNVIAAVENQLAKQP---LHS-QEL-L----DPLRALLAKTLAALTPGKLK----YSFFCNSGTESVEAALKLAKAYQ 158 (442)
T ss_pred CCHHHHHHHHHHHHhCC---Ccc-ccc-C----CHHHHHHHHHHHHhCCCCcC----EEEEeCCchHHHHHHHHHHHHHH
Confidence 47999999998886521 111 111 1 12223355777776643333 4555 56666877665533 1
Q ss_pred --CCCCeEEEecCCCCcccCccccc-----cccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhh-----cCCcEEEE
Q 022564 134 --KPHDRIMALDLPHGGHLSHGYQT-----DTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL-----FRPKLIVA 201 (295)
Q Consensus 134 --~~gd~Vl~~~~~~~~~~~~~~~~-----~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~-----~~tk~i~l 201 (295)
....+|+.....|.+........ ++....-....+..+| -.|.+++++.++. .++.+|++
T Consensus 159 ~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p--------~~d~~~~~~~l~~~~~~~~~vAavIv 230 (442)
T TIGR03372 159 SPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVA--------FGDIEAMLKALNECKKTGDDVAAIIL 230 (442)
T ss_pred hhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeC--------CCCHHHHHHHHHHHhcCCCcEEEEEE
Confidence 13467888886665543211111 0000000000011122 1267777777742 24667777
Q ss_pred c--CCCCCCccC----HHHHHHHHHHcCCEEEEEccccccccccCC----CCCCCCcceEEEeCCCCCCCCC--ceEEEE
Q 022564 202 G--ASAYARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGV----IPSPFEYADVVTTTTHKSLRGP--RGAMIF 269 (295)
Q Consensus 202 ~--~~n~~~~~~----l~~I~~ia~~~~~~vivD~a~~~g~~~~~~----~~~~~~~~D~~~~s~~K~l~gp--~gG~l~ 269 (295)
. .++-|...+ ++++.++|++||+++|+|++|. |.-..+. ...++ ..|+++ ..|.+++. +.|.++
T Consensus 231 Epv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~t-G~GRtG~~~a~e~~gv-~PDivt--~gK~lg~G~~Pigavv 306 (442)
T TIGR03372 231 EPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQT-GMGRTGKMFACEHEGV-QPDILC--LAKALGGGVMPIGATI 306 (442)
T ss_pred eCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeeccc-CCCccccchhhhhcCC-CCCeee--ehhhhcCCcccceEEE
Confidence 4 333355555 9999999999999999999984 3211111 11111 278776 68998753 345566
Q ss_pred EeCCchhhh
Q 022564 270 FRKGVKEIN 278 (295)
Q Consensus 270 ~~~~~~~~~ 278 (295)
+++++.+..
T Consensus 307 ~~~~i~~~~ 315 (442)
T TIGR03372 307 ATEAVFSVL 315 (442)
T ss_pred ecHHHHHhh
Confidence 777765543
No 322
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=98.60 E-value=6.6e-07 Score=78.40 Aligned_cols=110 Identities=15% Similarity=0.176 Sum_probs=78.7
Q ss_pred CCCCHHHHHHHHhhc---CCcEEEEcCCCC---C---CccCHHHHHHHHHHcCCEEEEEccccccccccC------CCCC
Q 022564 180 GYIDYDQLEKSATLF---RPKLIVAGASAY---A---RLYDYERIRKVCNKQKAIMLADMAHISGLVAAG------VIPS 244 (295)
Q Consensus 180 ~~id~e~l~~~i~~~---~tk~i~l~~~n~---~---~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~------~~~~ 244 (295)
+.+|++.|++.|++. +...|+++-+|| | +..++++..+||++|++.++.|++..+-...+- ...+
T Consensus 167 Gd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~Da~RfaENaYFIk~rE~gYrd~ 246 (471)
T COG3033 167 GNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMDAARFAENAYFIKQREPGYRDW 246 (471)
T ss_pred CccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEEeehhhhhhhhhhhhhcCcccccc
Confidence 578999999999753 455666654444 2 566788999999999999999999664433321 1112
Q ss_pred C--------CCcceEEEeCCCCCCCCCceEEEEEeCCc-hhhhc--cCCeeEEEeE
Q 022564 245 P--------FEYADVVTTTTHKSLRGPRGAMIFFRKGV-KEINK--QGKEFTCRCF 289 (295)
Q Consensus 245 ~--------~~~~D~~~~s~~K~l~gp~gG~l~~~~~~-~~~~~--~~~~~~~~~~ 289 (295)
. +.++|.+++|+-|--..+-||+|+.+++- -++.. +-..+.+.+|
T Consensus 247 sI~~IarEm~sYaD~~~mS~KKD~lvnmGGfl~~~D~~~fDvy~~~~~~~V~~eG~ 302 (471)
T COG3033 247 SIEEIAREMYSYADGCTMSAKKDGLVNMGGFLCFKDDSFFDVYEECRTLVVVQEGF 302 (471)
T ss_pred cHHHHHHHHHhhhhhheeeccccceeccccEEEecCccHHHHHHHHHhheEeeccc
Confidence 1 23699999999998778999999999983 34332 3356666655
No 323
>PLN00144 acetylornithine transaminase
Probab=98.58 E-value=2.3e-06 Score=78.50 Aligned_cols=193 Identities=13% Similarity=0.096 Sum_probs=104.9
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEe-CCChHHHHHHHHhh---c
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQS-LSGSPSNFQVYTAL---L 133 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~-~sG~~a~~~~~~al---~ 133 (295)
-.|++.+++.+.+.+.. +... .+. + +...++.+.+.+..+. + .+++ .||+.|+.+++... .
T Consensus 32 ~~p~v~~ai~~q~~~~~---~~~~-~~~-~----~~~~~la~~l~~~~~~--~----~v~f~~sGseA~e~AlklAr~~~ 96 (382)
T PLN00144 32 GDPDWVKAVAEQAGTLA---HVSN-VYH-T----IPQVELAKRLVASSFA--D----RVFFCNSGTEANEAAIKFARKYQ 96 (382)
T ss_pred CCHHHHHHHHHHHHhcC---Cccc-ccc-C----HHHHHHHHHHHhcCCC--C----eEEEeCCcHHHHHHHHHHHHHHH
Confidence 47899999998886521 1111 011 1 1222344666665532 2 4444 56666777655533 1
Q ss_pred C------C------CCeEEEecCCCCcccCcccccc-----ccc--cccceeeeEEEeeecCCCCCCCCHHHHHHHHhhc
Q 022564 134 K------P------HDRIMALDLPHGGHLSHGYQTD-----TKK--ISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF 194 (295)
Q Consensus 134 ~------~------gd~Vl~~~~~~~~~~~~~~~~~-----~~~--~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~ 194 (295)
. + ..+|+.....|.+...-..... +.. ....+ +..++ -.|++++++.+...
T Consensus 97 ~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~--~~~~~--------~~d~~~l~~~~~~~ 166 (382)
T PLN00144 97 RVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPG--VTFVE--------YGNLEAARKLIQKG 166 (382)
T ss_pred hccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCC--eEEeC--------CCCHHHHHHhcCCC
Confidence 1 1 2568888766655421111000 000 00000 11111 12789999888654
Q ss_pred CCcEEEEcC-CCCC---CccC--HHHHHHHHHHcCCEEEEEccccccccccC-CCCCCCC--cceEEEeCCCCCCC-CCc
Q 022564 195 RPKLIVAGA-SAYA---RLYD--YERIRKVCNKQKAIMLADMAHISGLVAAG-VIPSPFE--YADVVTTTTHKSLR-GPR 264 (295)
Q Consensus 195 ~tk~i~l~~-~n~~---~~~~--l~~I~~ia~~~~~~vivD~a~~~g~~~~~-~~~~~~~--~~D~~~~s~~K~l~-gp~ 264 (295)
++++|++.+ .+++ .... +++|.++|++||+++|+|+++. |.-..+ .....+. ..| +.++.|.++ |-+
T Consensus 167 ~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~t-g~gr~g~~~~~~~~~~~PD--i~t~sK~l~~G~p 243 (382)
T PLN00144 167 KTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQC-GLGRTGYLWAHEAYGVEPD--IMTLAKPLAGGLP 243 (382)
T ss_pred CeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-CCCccchHhhhhhcCCCCC--EEEecccccCCcc
Confidence 678888863 3333 2223 8899999999999999999975 221222 1110011 256 566689885 334
Q ss_pred eEEEEEeCCchhhh
Q 022564 265 GAMIFFRKGVKEIN 278 (295)
Q Consensus 265 gG~l~~~~~~~~~~ 278 (295)
.|++++++++.+..
T Consensus 244 ig~v~~~~~~~~~~ 257 (382)
T PLN00144 244 IGAVLVTEKVASAI 257 (382)
T ss_pred eEEEEEcHHHHhcc
Confidence 49999988876654
No 324
>PRK12403 putative aminotransferase; Provisional
Probab=98.58 E-value=2.9e-06 Score=79.59 Aligned_cols=205 Identities=15% Similarity=0.078 Sum_probs=101.6
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhc----
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALL---- 133 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~---- 133 (295)
-.|++.+++.+.+.+ +.... ..+... .+...++.+.++++++...+. .++++||+.|+.+++....
T Consensus 71 ~hp~v~~A~~~q~~~-~~~~~---~~~~~~---~~~~~~lae~L~~~~p~~~~~---v~f~~SGseA~e~AiklAr~~~~ 140 (460)
T PRK12403 71 GRKDLAAAAARQMEQ-LPYYN---MFFHTT---HPAVIELSELLFSLLPGHYSH---AIYTNSGSEANEVLIRTVRRYWQ 140 (460)
T ss_pred CCHHHHHHHHHHHHh-CCCee---cccccC---CHHHHHHHHHHHHhCCCCcCE---EEEeCCcHHHHHHHHHHHHHHHH
Confidence 479999999998876 31111 111111 122233557787777643331 4555677778887666542
Q ss_pred ---CCCCeE-EEecCC-CCcccCccccc----ccc-ccccceeeeEEEeeecC-CCCCC--------CCHHHHHHHHhh-
Q 022564 134 ---KPHDRI-MALDLP-HGGHLSHGYQT----DTK-KISAVSIFFETMPYRLN-ESTGY--------IDYDQLEKSATL- 193 (295)
Q Consensus 134 ---~~gd~V-l~~~~~-~~~~~~~~~~~----~~~-~~~~~g~~~~~v~~~~~-~~~~~--------id~e~l~~~i~~- 193 (295)
++++.+ +..... |+......... +.. .....+ +..++.+.. ...+. .+.+++++.+.+
T Consensus 141 ~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~--~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~ 218 (460)
T PRK12403 141 VLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPD--VAHIDEPYWYANGGELTPAEFGRRAALQLEEKILEL 218 (460)
T ss_pred hhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCC--CEEeCCCcccccccCCChHHHHHHHHHHHHHHHHHh
Confidence 233444 344433 33322111000 000 000000 111221100 00000 113556665532
Q ss_pred --cCCcEEEEc--CCCCCCccC----HHHHHHHHHHcCCEEEEEcccc-ccccccC--CCCCCCCcceEEEeCCCCCCCC
Q 022564 194 --FRPKLIVAG--ASAYARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAG--VIPSPFEYADVVTTTTHKSLRG 262 (295)
Q Consensus 194 --~~tk~i~l~--~~n~~~~~~----l~~I~~ia~~~~~~vivD~a~~-~g~~~~~--~~~~~~~~~D~~~~s~~K~l~g 262 (295)
.++.+|++- ..+.|...+ +++|.++|++||+++|+|++|. +|-.... ....++ ..|+++ ..|.++|
T Consensus 219 ~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~e~~gv-~PDiv~--~gK~lgg 295 (460)
T PRK12403 219 GAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGEWFAHEHFGF-EPDTLS--IAKGLTS 295 (460)
T ss_pred CCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhhhhhcCC-CCCeEE--Ecccccc
Confidence 245667774 333355555 9999999999999999999984 2221111 111121 268886 6898864
Q ss_pred C--ceEEEEEeCCchhh
Q 022564 263 P--RGAMIFFRKGVKEI 277 (295)
Q Consensus 263 p--~gG~l~~~~~~~~~ 277 (295)
. +-|.+++++++.+.
T Consensus 296 G~~Piga~v~~~~i~~~ 312 (460)
T PRK12403 296 GYVPMGGLVLSKRIAEA 312 (460)
T ss_pred cccceEEEEECHHHHHH
Confidence 3 22444477776554
No 325
>PRK07046 aminotransferase; Validated
Probab=98.57 E-value=1.9e-06 Score=80.63 Aligned_cols=195 Identities=13% Similarity=0.073 Sum_probs=110.0
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeC-CChHHHHHHHHhh--cC
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSL-SGSPSNFQVYTAL--LK 134 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~-sG~~a~~~~~~al--~~ 134 (295)
-.|.+.+++.+.+.+....+. . .+.+.++.+.+.+.++. + .+.|+ ||+.|+..++... ..
T Consensus 92 ~~p~i~~Av~~q~~~~~~~~~-------~----~~~~~~lAe~l~~~~~~--~----~v~F~nSGtEA~e~AlrlAR~~T 154 (453)
T PRK07046 92 SPAPVARALAEQARRGLTTML-------P----SEDAAWVGEELARRFGL--P----YWQVATTATDANRFVLRWARAVT 154 (453)
T ss_pred CCHHHHHHHHHHHHhCCCCCC-------C----CHHHHHHHHHHHHHhCC--C----EEEEECCHHHHHHHHHHHHHHhh
Confidence 368999999998876321111 1 12333466777777753 3 45554 5555777665543 23
Q ss_pred CCCeEEEecCCCCcccCccccccccc-----cccceeee----EEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEc--C
Q 022564 135 PHDRIMALDLPHGGHLSHGYQTDTKK-----ISAVSIFF----ETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG--A 203 (295)
Q Consensus 135 ~gd~Vl~~~~~~~~~~~~~~~~~~~~-----~~~~g~~~----~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~--~ 203 (295)
..++|+...-.|.+...........+ ....|... ....++ + -|++++++.+...+..+|++- .
T Consensus 155 Gr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-----~-nd~~~l~~~l~~~~vAavi~EPi~ 228 (453)
T PRK07046 155 GRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVE-----F-NDLAALEAALADGDVAAVLAEPAM 228 (453)
T ss_pred CCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeC-----C-CCHHHHHHHhCCCCeEEEEECCCC
Confidence 45788888866666521111000000 00111000 011111 1 278999998864467788874 2
Q ss_pred CCCCCc----cCHHHHHHHHHHcCCEEEEEccccccccccCCC-CCCCCcceEEEeCCCCCCCCCc-eEEEEEeCCchhh
Q 022564 204 SAYARL----YDYERIRKVCNKQKAIMLADMAHISGLVAAGVI-PSPFEYADVVTTTTHKSLRGPR-GAMIFFRKGVKEI 277 (295)
Q Consensus 204 ~n~~~~----~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~-~~~~~~~D~~~~s~~K~l~gp~-gG~l~~~~~~~~~ 277 (295)
.+.|.. .-++++.++|++||+++|.|+.+.++.-..+.. ..++ ..|+++ ..|.++|.- .|++.+++++.+.
T Consensus 229 g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~tfr~g~Gg~~~~~gv-~PDi~t--~gK~lggG~Pi~av~g~~~i~~~ 305 (453)
T PRK07046 229 TNIGMVLPEPGFHEALRELTRRYGTLLVIDETHTISSGPGGYTRAHGL-EPDFLV--VGKPIAGGVPCAVYGFSAELAER 305 (453)
T ss_pred CCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccccCccCCcchhHHhCC-Ccccee--ehhhhcCCCcceeeeehHHHHHH
Confidence 333322 238999999999999999999986221111111 1111 278876 489886543 3888899887665
Q ss_pred h
Q 022564 278 N 278 (295)
Q Consensus 278 ~ 278 (295)
.
T Consensus 306 ~ 306 (453)
T PRK07046 306 A 306 (453)
T ss_pred H
Confidence 4
No 326
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=98.53 E-value=3.4e-06 Score=78.44 Aligned_cols=200 Identities=16% Similarity=0.145 Sum_probs=103.9
Q ss_pred CCHHHHHHHhhhhhcc-CCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCC--CCCcceeEEe--CCChHHHHHHHHhh
Q 022564 58 TSVSVMQAVGSVMTNK-YSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLD--PEKWGVNVQS--LSGSPSNFQVYTAL 132 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~-~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~--~~~~~~~v~~--~sG~~a~~~~~~al 132 (295)
-.|++.+++.+.+... +..+ ..+ . .....++.+.+.+.+..+ .+. .++| .||+.|+.+++...
T Consensus 56 ~~p~v~~ai~~ql~~~~~~~~----~~~-~----~~~~~~lae~l~~~~~~~~~~~~---~~~f~~~sGseA~e~AlklA 123 (425)
T PRK09264 56 NNPVLKQALIDYLQRDGITHG----LDM-H----TTAKREFLETFEETILKPRGLDY---KVQFTGPTGTNAVEAALKLA 123 (425)
T ss_pred CCHHHHHHHHHHHHhcccccc----ccc-C----cHHHHHHHHHHHHhhcCCcCCCc---eEEEeCCCHHHHHHHHHHHH
Confidence 4789999998887641 1111 001 1 122222445665553221 111 3444 47777777665543
Q ss_pred --cCCCCeEEEecCCCCcccCcccc-----cccc--ccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhc-----CCcE
Q 022564 133 --LKPHDRIMALDLPHGGHLSHGYQ-----TDTK--KISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF-----RPKL 198 (295)
Q Consensus 133 --~~~gd~Vl~~~~~~~~~~~~~~~-----~~~~--~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~-----~tk~ 198 (295)
.....+|+.....|.+....... .++. +....+ +..+|++.......-|++++++.+.+. ++.+
T Consensus 124 r~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~--~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~~aa 201 (425)
T PRK09264 124 RKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNN--VTRMPYDGYFGGDVDTLAYLEKLLEDSSSGVDLPAA 201 (425)
T ss_pred HHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCC--eEEeCCCCccccchhHHHHHHHHHHhccCCCCceEE
Confidence 23446788877666554211110 0110 000111 223333211000013678888888531 3567
Q ss_pred EEEc--CCCCC----CccCHHHHHHHHHHcCCEEEEEccccccccccC----CCCCCCCcceEEEeCCCCCCCC-C-ceE
Q 022564 199 IVAG--ASAYA----RLYDYERIRKVCNKQKAIMLADMAHISGLVAAG----VIPSPFEYADVVTTTTHKSLRG-P-RGA 266 (295)
Q Consensus 199 i~l~--~~n~~----~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~----~~~~~~~~~D~~~~s~~K~l~g-p-~gG 266 (295)
|++- ..+.| ....+++|.++|++||+++|+|++|. |.-..+ .....+ ..|++++ .|.+++ . +-|
T Consensus 202 vi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~t-G~GrtG~~~~~~~~~v-~PDi~t~--~K~l~~~G~pig 277 (425)
T PRK09264 202 VIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQA-GCGRTGTFFSFERAGI-TPDIVTL--SKSISGYGLPMA 277 (425)
T ss_pred EEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhh-CCccccHHHHHhhcCC-CCCEEEe--ccccCCCccceE
Confidence 7773 23323 33469999999999999999999986 221111 011111 2687766 498854 1 228
Q ss_pred EEEEeCCch
Q 022564 267 MIFFRKGVK 275 (295)
Q Consensus 267 ~l~~~~~~~ 275 (295)
++++++++.
T Consensus 278 av~~~~~i~ 286 (425)
T PRK09264 278 LVLIKPELD 286 (425)
T ss_pred EEEEchhhh
Confidence 888887764
No 327
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=98.52 E-value=3.7e-06 Score=74.52 Aligned_cols=209 Identities=17% Similarity=0.149 Sum_probs=119.3
Q ss_pred HHHHHHHHHHHHHHH-cCceecCC-------CCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHH
Q 022564 32 PEIADIIEHEKARQW-KGLELIPS-------ENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALE 103 (295)
Q Consensus 32 ~~~~~~~~~~~~~~~-~~i~L~~~-------~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~ 103 (295)
.-+..+.+...+..+ +.|||..| ..+.-+.|.+|-...+.+.. ...|-+-.+.+...+.+.+.
T Consensus 11 DpIlgL~e~f~~D~R~~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~~~------~k~Yl~i~G~~~f~~~~~~l--- 81 (396)
T COG1448 11 DPILGLKEAFKADPRPNKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQEK------TKNYLPIEGLPEFLEAVQKL--- 81 (396)
T ss_pred CchhHHHHHHhcCCCcCeeeeeeeeeeCCCCCcchhHHHHHHHHHhhcccc------ccccCCcCCcHHHHHHHHHH---
Confidence 344455555433333 66888654 22334555555444443322 23355556666666544333
Q ss_pred HcCCC-----CCCcceeEEeCCChHHHHHHH--HhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecC
Q 022564 104 AFRLD-----PEKWGVNVQSLSGSPSNFQVY--TALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 176 (295)
Q Consensus 104 ~~g~~-----~~~~~~~v~~~sG~~a~~~~~--~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 176 (295)
+||.+ .+.+ +.+...+|+-|+-... ..-..|...|.+++|..+.|.. .....|.++...|+ .|
T Consensus 82 lFG~d~~~l~~~Rv-~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~--------If~~aGl~v~~Y~Y-yd 151 (396)
T COG1448 82 LFGADSPALAEDRV-ATVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKA--------IFEAAGLEVETYPY-YD 151 (396)
T ss_pred hcCCCcHHHHhhhH-hheecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHH--------HHHhcCCceeeeec-cc
Confidence 57743 2221 2344444444555222 2224577789999955555533 33466777766665 45
Q ss_pred CCCCCCCHHHHHHHHhhcC-CcEEEE--cCCCCC----CccCHHHHHHHHHHcCCEEEEEccccccccccCCCC--CCC-
Q 022564 177 ESTGYIDYDQLEKSATLFR-PKLIVA--GASAYA----RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIP--SPF- 246 (295)
Q Consensus 177 ~~~~~id~e~l~~~i~~~~-tk~i~l--~~~n~~----~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~--~~~- 246 (295)
.++..+|++.+.+.++... -.+|++ |.+|++ +...-++|.++.++.+.+.+.|-|+ -|.-.. +.. .++
T Consensus 152 ~~~~~~df~~mla~L~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AY-QGF~~G-leeDa~~lR 229 (396)
T COG1448 152 AETKGLDFDGMLADLKTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAY-QGFADG-LEEDAYALR 229 (396)
T ss_pred cccccccHHHHHHHHHhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhh-hhhccc-hHHHHHHHH
Confidence 5677899999998887532 345666 456653 3444568999999999999999993 332221 211 110
Q ss_pred ----Cc-ceEEEeCCCCCCC
Q 022564 247 ----EY-ADVVTTTTHKSLR 261 (295)
Q Consensus 247 ----~~-~D~~~~s~~K~l~ 261 (295)
.+ --+++.|++|+|+
T Consensus 230 ~~a~~~~~~lva~S~SKnfg 249 (396)
T COG1448 230 LFAEVGPELLVASSFSKNFG 249 (396)
T ss_pred HHHHhCCcEEEEehhhhhhh
Confidence 01 2478999999884
No 328
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=98.52 E-value=4e-08 Score=87.83 Aligned_cols=174 Identities=16% Similarity=0.079 Sum_probs=100.6
Q ss_pred chHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH--HHHHHHHhhc--CCCCeEEEecCCCCcccCcccccccccccc
Q 022564 88 EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP--SNFQVYTALL--KPHDRIMALDLPHGGHLSHGYQTDTKKISA 163 (295)
Q Consensus 88 ~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~--a~~~~~~al~--~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~ 163 (295)
..+..|-..+...+-+..|+..-. ..+++..++ .+..++.++- ..++.|+.+..+|.+-+. .+..
T Consensus 52 s~~~~ltn~l~~d~~~~~G~~~~~---~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~k--------ai~~ 120 (389)
T PF05889_consen 52 SLLAKLTNSLVLDALRLAGLRSVK---SCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCFK--------AIER 120 (389)
T ss_dssp HHHHHHHHHHHHHHHHHTTHTTHC---EEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHHH--------HHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCcccc---ceEEEecccccHHHHHHHHHhcccCCceEEEeeccccchHH--------HHHh
Confidence 334455554445555678886421 455556666 3333555553 467888888877665433 4456
Q ss_pred ceeeeEEEeeecCCCCCCCCHHHHHHHHhhc--CCcEEEEc--CCCCCCccC-HHHHHHHHHHcCCEEEEEccccccccc
Q 022564 164 VSIFFETMPYRLNESTGYIDYDQLEKSATLF--RPKLIVAG--ASAYARLYD-YERIRKVCNKQKAIMLADMAHISGLVA 238 (295)
Q Consensus 164 ~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~--~tk~i~l~--~~n~~~~~~-l~~I~~ia~~~~~~vivD~a~~~g~~~ 238 (295)
+|.++.+++-...++....|++.+++.+++. ...+.+++ .-++|...| +++|+++|++||++.++-+|++.-...
T Consensus 121 AGl~~~vV~~~~~~d~l~td~~~ie~~i~~~G~~~iLcvltttscfapr~~D~i~~IakiC~~~~IPhlvNnAYgvQ~~~ 200 (389)
T PF05889_consen 121 AGLEPVVVENVLEGDELITDLEAIEAKIEELGADNILCVLTTTSCFAPRLPDDIEEIAKICKEYDIPHLVNNAYGVQSSK 200 (389)
T ss_dssp TT-EEEEE-EEEETTEEEEHHHHHHHHHHHHCGGGEEEEEEESSTTTTB----HHHHHHHHHHHT--EEEEGTTTTT-HH
T ss_pred cCCeEEEeeccCCCCeeeccHHHHHHHHHHhCCCCeEEEEEecCccCCCCCccHHHHHHHHHHcCCceEEccchhhhHHH
Confidence 7877777764444333467899999998753 23455554 333476666 999999999999999999997651110
Q ss_pred c-C-C-CCCCCCcceEEEeCCCCCCCCCce-EEEEEeC
Q 022564 239 A-G-V-IPSPFEYADVVTTTTHKSLRGPRG-AMIFFRK 272 (295)
Q Consensus 239 ~-~-~-~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~ 272 (295)
. . + ......-.|+++-|+.|.|..|-| +.++..+
T Consensus 201 ~~~~i~~a~~~GRvda~vqS~dkNF~VPvGgai~As~~ 238 (389)
T PF05889_consen 201 CMHLIQQAWRVGRVDAFVQSTDKNFMVPVGGAIMASFD 238 (389)
T ss_dssp HHHHHHHHHHHSTCSEEEEEHHHHHCEESSHEEEEESS
T ss_pred HHHHHHHHHhcCCcceeeeecCCCEEecCCCcEEEecC
Confidence 0 0 0 000001278889999999988888 5555544
No 329
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=98.51 E-value=1.1e-05 Score=75.76 Aligned_cols=193 Identities=16% Similarity=0.165 Sum_probs=105.5
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeC-CChHHHHHHHHhh--cC
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSL-SGSPSNFQVYTAL--LK 134 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~-sG~~a~~~~~~al--~~ 134 (295)
-.|++.+++.+.+.+... ++. . .+.+.++.+.+.+.+.. .+ .+.|+ ||+.|+.+++... ..
T Consensus 116 ~~p~v~~av~~ql~~~~~--------~~~-~--~~~~~~lAe~l~~~~p~-~~----~v~f~~SGsEA~e~AlklAR~~t 179 (474)
T PLN02482 116 ADDEVLAALAETMKKGTS--------FGA-P--CLLENVLAEMVIDAVPS-VE----MVRFVNSGTEACMGVLRLARAYT 179 (474)
T ss_pred CCHHHHHHHHHHHhhCCC--------CCC-C--CHHHHHHHHHHHHhCCC-CC----EEEEeCChHHHHHHHHHHHHHhc
Confidence 368999999988875221 111 1 12333355677776643 23 45555 4555777665543 23
Q ss_pred CCCeEEEecCCCCcccCccccccccc------cccceee----eEEEeeecCCCCCCCCHHHHHHHHhhc--CCcEEEEc
Q 022564 135 PHDRIMALDLPHGGHLSHGYQTDTKK------ISAVSIF----FETMPYRLNESTGYIDYDQLEKSATLF--RPKLIVAG 202 (295)
Q Consensus 135 ~gd~Vl~~~~~~~~~~~~~~~~~~~~------~~~~g~~----~~~v~~~~~~~~~~id~e~l~~~i~~~--~tk~i~l~ 202 (295)
..++|+...-.|.++..........+ ....+.. ...+.++. -|++++++.+... ++.+|++.
T Consensus 180 gr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------nd~~~l~~~l~~~~~~iAavI~E 253 (474)
T PLN02482 180 GREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPY------NDLEAVKKLFEANKGEIAAVILE 253 (474)
T ss_pred CCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecC------CChHHHHHHHHhCCCceEEEEEC
Confidence 45678888766666432111000000 0000100 00011111 1789999888632 45667764
Q ss_pred --CCCCCCccC----HHHHHHHHHHcCCEEEEEccccccccccCC----CCCCCCcceEEEeCCCCCCCC--CceEEEEE
Q 022564 203 --ASAYARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGV----IPSPFEYADVVTTTTHKSLRG--PRGAMIFF 270 (295)
Q Consensus 203 --~~n~~~~~~----l~~I~~ia~~~~~~vivD~a~~~g~~~~~~----~~~~~~~~D~~~~s~~K~l~g--p~gG~l~~ 270 (295)
.++.|...| +++|.++|++||+++|+|++| .|. ..+. ...++ ..|++++ .|.++| |- |.+.+
T Consensus 254 pv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~-tGf-R~g~~ga~~~~gv-~PDi~t~--gK~lggG~Pi-gav~g 327 (474)
T PLN02482 254 PVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVM-TGF-RIAYGGAQEYFGI-TPDLTTL--GKVIGGGLPV-GAYGG 327 (474)
T ss_pred CCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccc-cCe-ecCcchHhHHhCC-CCCEEEe--cchhhCCCce-EEEEE
Confidence 333343333 678999999999999999998 454 2221 01111 2687644 898865 33 55588
Q ss_pred eCCchhhh
Q 022564 271 RKGVKEIN 278 (295)
Q Consensus 271 ~~~~~~~~ 278 (295)
++++.+..
T Consensus 328 ~~ei~~~~ 335 (474)
T PLN02482 328 RREIMEMV 335 (474)
T ss_pred cHHHHHhh
Confidence 88876654
No 330
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=98.48 E-value=7.3e-07 Score=78.51 Aligned_cols=205 Identities=13% Similarity=0.065 Sum_probs=119.2
Q ss_pred cCceecCCCCCCCHHHHHHHhhhhhccCCCCCC--CCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-
Q 022564 47 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYP--GARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP- 123 (295)
Q Consensus 47 ~~i~L~~~~~~~~~~v~~al~~~l~~~~~~g~~--~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~- 123 (295)
...|+++|....|++|++.+.+.+.+....|.. ..+| . +.....+...+++.++++++++.+. .|.|..|+.
T Consensus 5 ~~~nFsaGPa~lp~~vL~~a~~e~~~~~g~g~svme~SH-R-sk~~~~v~~~a~~~lreLl~iPd~Y---~VlflqGGat 79 (365)
T COG1932 5 RVYNFSAGPAALPPEVLQQAQKELLDWNGLGMSVMEISH-R-SKEFKNVLEEAEKDLRELLNIPDDY---KVLFLQGGAT 79 (365)
T ss_pred CCCCCCCCcccCCHHHHHHHHHHHhhhccCCcceeeecc-c-cHHHHHHHHHHHHHHHHHhCCCCCc---eEEEEcCccH
Confidence 457888999989999999998877663322211 1111 1 1334556667889999999998764 777777766
Q ss_pred -HHHHHHHhhcCCCCe--EEEecCCCCcccCccccccccccccceeeeEEEeee-cCC-CCCCCCHHHHHHHHhhcCCcE
Q 022564 124 -SNFQVYTALLKPHDR--IMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYR-LNE-STGYIDYDQLEKSATLFRPKL 198 (295)
Q Consensus 124 -a~~~~~~al~~~gd~--Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~-~~~~id~e~l~~~i~~~~tk~ 198 (295)
...++...++.++.. |.+-..+. ..+. -+...+......... ... -+..++++.+. +.+ +..-
T Consensus 80 ~qf~~~p~nLl~~~~~~yv~~g~Ws~--------~a~~-eA~~~~~~~~~~~~~~~~~~~~~iP~~~~~~--~~~-~~ay 147 (365)
T COG1932 80 GQFAMAPMNLLGKRGTDYVDTGAWSE--------FAIK-EAKKVGKQPKLIDARIEEAGYGSIPDLSKWD--FSD-NDAY 147 (365)
T ss_pred HHHHHHHHhhhcccCceeEeeeehhH--------hHHH-HHHHhcccccccccceeccCccCCCChhhcc--cCC-CccE
Confidence 566677888766543 44332111 1111 011111101111100 110 12245555543 333 3444
Q ss_pred EEEcCCCC--CCccC-HHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCce-EEEEEeCCc
Q 022564 199 IVAGASAY--ARLYD-YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGV 274 (295)
Q Consensus 199 i~l~~~n~--~~~~~-l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~~ 274 (295)
|.+|..+. |...+ ...+. . +.++++|.+..+...+.+... .|++.++.+|++ ||.| ++++.|+++
T Consensus 148 v~~~~NeTi~Gv~v~~~p~~~---~--~~~~v~D~SS~ilsr~iDvsk-----~dviyagaQKnl-GpaGltvvIvr~~~ 216 (365)
T COG1932 148 VHFCWNETISGVEVPELPDIG---S--DGLLVADASSAILSRPIDVSK-----YDVIYAGAQKNL-GPAGLTVVIVRPDL 216 (365)
T ss_pred EEEecCCcccceEccCCCCCC---C--CceEEEecccHHhcCCCChhH-----cceEEEehhhcc-CccceEEEEEcHHH
Confidence 66663333 42222 22221 1 289999999777666665544 789999999998 7899 999999998
Q ss_pred hhhhc
Q 022564 275 KEINK 279 (295)
Q Consensus 275 ~~~~~ 279 (295)
.....
T Consensus 217 l~r~~ 221 (365)
T COG1932 217 LERAE 221 (365)
T ss_pred Hhccc
Confidence 76543
No 331
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=98.47 E-value=7e-06 Score=76.60 Aligned_cols=202 Identities=13% Similarity=0.063 Sum_probs=108.4
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEe-CCChHHHHHHHHhh--cC
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQS-LSGSPSNFQVYTAL--LK 134 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~-~sG~~a~~~~~~al--~~ 134 (295)
-.|++.+++.+.+.+ ...+.... + . .+...++.+.+++++.-..+ .++| +||+.|+.+++... ..
T Consensus 60 ~~p~v~~a~~~q~~~-~~~~~~~~--~-~----~~~~~~la~~L~~~~~~~~~----~v~f~~SGseA~e~AlklAr~~t 127 (433)
T PRK08117 60 RHPKVVQAIKEQADK-LMHGPSGV--I-Y----YESILKLAEELAEITPGGLD----CFFFSNSGAEAIEGALKLAKHVT 127 (433)
T ss_pred CCHHHHHHHHHHHHh-ccCccccc--c-C----CHHHHHHHHHHHHhCCCCCC----EEEEeCcHHHHHHHHHHHHHHhc
Confidence 478999999998865 21111111 1 1 12233355778777732222 5666 56777888766643 23
Q ss_pred CCCeEEEecCCCCcccCccc------cccccc--cccceeeeEEEeeecCC---CCC------CCCHHHHHHHHhh----
Q 022564 135 PHDRIMALDLPHGGHLSHGY------QTDTKK--ISAVSIFFETMPYRLNE---STG------YIDYDQLEKSATL---- 193 (295)
Q Consensus 135 ~gd~Vl~~~~~~~~~~~~~~------~~~~~~--~~~~g~~~~~v~~~~~~---~~~------~id~e~l~~~i~~---- 193 (295)
...+|+..+..|.+...... ..+... ....+ +..+|++... ... .-|++++++.++.
T Consensus 128 gr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 205 (433)
T PRK08117 128 KRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGS--VYQAPYPYCDRCPKGEDPEVCFLECLRDLESLFKHQVTP 205 (433)
T ss_pred CCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCC--cEEeCCCccccccccCchhHHHHHHHHHHHHHHHhccCC
Confidence 34667777655544321110 000000 00111 1223322100 000 0156777777642
Q ss_pred cCCcEEEEc--CCCCCCccC----HHHHHHHHHHcCCEEEEEccccccccccCC----CCCCCCcceEEEeCCCCCCCC-
Q 022564 194 FRPKLIVAG--ASAYARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGV----IPSPFEYADVVTTTTHKSLRG- 262 (295)
Q Consensus 194 ~~tk~i~l~--~~n~~~~~~----l~~I~~ia~~~~~~vivD~a~~~g~~~~~~----~~~~~~~~D~~~~s~~K~l~g- 262 (295)
.++.+|++. .++.|...+ +++|.++|++||+++|+|++|. |.-..+. ...++ ..|+ .++.|.+++
T Consensus 206 ~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~t-G~gr~G~~~~~~~~gv-~pDi--~t~sK~lg~G 281 (433)
T PRK08117 206 EEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQT-GFGRTGEWFAAQTFGV-VPDI--MTIAKGIASG 281 (433)
T ss_pred CcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchh-ccCccccchhHhhcCC-CCCE--eehhhhccCC
Confidence 246677774 333355555 9999999999999999999987 5322221 11110 1455 578998863
Q ss_pred CceEEEEEeCCchhh
Q 022564 263 PRGAMIFFRKGVKEI 277 (295)
Q Consensus 263 p~gG~l~~~~~~~~~ 277 (295)
.+.|++++++++.+.
T Consensus 282 ~pigav~~~~~i~~~ 296 (433)
T PRK08117 282 LPLSAVVASKELMEQ 296 (433)
T ss_pred CcceeEEEcHHHHhh
Confidence 334788888776543
No 332
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=98.46 E-value=1.6e-05 Score=73.95 Aligned_cols=200 Identities=13% Similarity=0.124 Sum_probs=107.7
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEe-CCChHHHHHHHHhh--cC
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQS-LSGSPSNFQVYTAL--LK 134 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~-~sG~~a~~~~~~al--~~ 134 (295)
-.|++.+++.+.+.+....+ + .+ +.+.++.+.+.+.+....+ .+.+ .||+.|+..++... ..
T Consensus 70 ~~p~v~~ai~~q~~~~~~~~------~-~~----~~~~~la~~L~~~~~~~~~----~v~f~~SGsEA~e~AiklAr~~t 134 (433)
T PRK00615 70 SHPKICDAIQQGAERGTSYG------L-TS----EQEILFAEELFSYLGLEDH----KIRFVSSGTEATMTAVRLARGIT 134 (433)
T ss_pred CCHHHHHHHHHHHHhCCCCC------C-CC----HHHHHHHHHHHHhCCCCcC----EEEEeCchHHHHHHHHHHHHHhh
Confidence 47999999998886521100 1 11 1222355667676654322 4555 55555777665543 23
Q ss_pred CCCeEEEecCCCCcccCc-cccccccccccceeeeEEE-eeecCCC--C-CCCCHHHHHHHHhh--cCCcEEEEc--CCC
Q 022564 135 PHDRIMALDLPHGGHLSH-GYQTDTKKISAVSIFFETM-PYRLNES--T-GYIDYDQLEKSATL--FRPKLIVAG--ASA 205 (295)
Q Consensus 135 ~gd~Vl~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~v-~~~~~~~--~-~~id~e~l~~~i~~--~~tk~i~l~--~~n 205 (295)
...+|+...-.|.+.... ............+. .... +-+.... . ..-|++++++.+.. .++.+|++. .++
T Consensus 135 gr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~aavI~Epv~~~ 213 (433)
T PRK00615 135 GRSIIIKFLGCYHGHADTLLQGISFSETSLDTL-THLVDTDLAHPLTLSLPYNDFQIFQTVMNSLGHRVAGVIFEPICAN 213 (433)
T ss_pred CCCEEEEEcCccCCCCcccCcccccCCCCcCcC-CCCCCCCCCCCCeEeCCCCCHHHHHHHHHhcCCceEEEEECCCCCC
Confidence 346788777666664311 10000000000000 0000 0000000 0 01278899988853 245667664 333
Q ss_pred CCCccC----HHHHHHHHHHcCCEEEEEccccccccccCC----CCCCCCcceEEEeCCCCCCCC-CceEEEEEeCCchh
Q 022564 206 YARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGV----IPSPFEYADVVTTTTHKSLRG-PRGAMIFFRKGVKE 276 (295)
Q Consensus 206 ~~~~~~----l~~I~~ia~~~~~~vivD~a~~~g~~~~~~----~~~~~~~~D~~~~s~~K~l~g-p~gG~l~~~~~~~~ 276 (295)
.|...| +++|.++|++||+++|+|++|. |. ..+. ...++ ..|+++ ..|.++| -++|++++++++.+
T Consensus 214 ~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~t-G~-R~G~~ga~~~~gv-~PDi~~--~gK~lggG~p~~av~~~~~i~~ 288 (433)
T PRK00615 214 MGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVT-GF-RVAQGGAAAIYHV-KPDITV--YGKILGGGLPAAAVVAHKSIMD 288 (433)
T ss_pred CCcccCCHHHHHHHHHHHHHcCCEEEEEcccc-cc-cccHhHHHHhcCC-CCCeEE--EcccccCCcceeeeeecHHHHh
Confidence 344444 5699999999999999999994 54 2221 11111 278876 5899974 34789999988766
Q ss_pred hh
Q 022564 277 IN 278 (295)
Q Consensus 277 ~~ 278 (295)
..
T Consensus 289 ~~ 290 (433)
T PRK00615 289 HL 290 (433)
T ss_pred hh
Confidence 54
No 333
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=98.46 E-value=1.5e-05 Score=74.49 Aligned_cols=203 Identities=12% Similarity=0.054 Sum_probs=106.4
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhh--cC
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTAL--LK 134 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al--~~ 134 (295)
-.|.+.+++.+.+.+....... +.. .+...++.+.+.+......+ .++|+++.+ |+.+++... ..
T Consensus 58 ~~p~v~~Ai~~ql~~~~~~~~~----~~~----~~~~~~la~~L~~~~p~~~~----~v~f~~sGsEAve~AlklAr~~t 125 (443)
T PRK08360 58 NNPRVVKAIKEQTDKLIHYTPI----YGF----PVEPLLLAEKLIEIAPGDNP----KVSFGLSGSDANDGAIKFARAYT 125 (443)
T ss_pred CCHHHHHHHHHHHHhccCcccc----ccC----cHHHHHHHHHHHHhCCCCCC----EEEEcCCHHHHHHHHHHHHHHhc
Confidence 4889999999888752110110 111 12222355667776654333 566655444 877665543 23
Q ss_pred CCCeEEEecCCCCcccCccccc------cccccc-cceeeeEEEeeecCCC-CC--------CCCHHHHHHHHhh----c
Q 022564 135 PHDRIMALDLPHGGHLSHGYQT------DTKKIS-AVSIFFETMPYRLNES-TG--------YIDYDQLEKSATL----F 194 (295)
Q Consensus 135 ~gd~Vl~~~~~~~~~~~~~~~~------~~~~~~-~~g~~~~~v~~~~~~~-~~--------~id~e~l~~~i~~----~ 194 (295)
...+|+.....|.+........ .+.... ..+ +..++++.... .+ ..+++.+++.++. .
T Consensus 126 gr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 203 (443)
T PRK08360 126 KRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSD--VHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFEGEVYAE 203 (443)
T ss_pred CCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCC--cEEEeCCccccccccCchhhhHHHHHHHHHHHHHhccCCC
Confidence 4567877775555432110000 000000 111 22233221000 00 0234556666642 3
Q ss_pred CCcEEEEcCC-CC-CCcc----CHHHHHHHHHHcCCEEEEEccccccccccCCC----CCCCCcceEEEeCCCCCCCC-C
Q 022564 195 RPKLIVAGAS-AY-ARLY----DYERIRKVCNKQKAIMLADMAHISGLVAAGVI----PSPFEYADVVTTTTHKSLRG-P 263 (295)
Q Consensus 195 ~tk~i~l~~~-n~-~~~~----~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~----~~~~~~~D~~~~s~~K~l~g-p 263 (295)
++++|++.+. ++ |... -+++|.++|++||+++|+|++|. |.-..+.. ..++ ..|++++ .|.+++ .
T Consensus 204 ~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~gr~G~~~a~~~~~~-~pDiitl--sK~l~~G~ 279 (443)
T PRK08360 204 GVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQS-GLGRTGKWFAIEHFGV-EPDIITL--GKPLGGGL 279 (443)
T ss_pred CeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCccchhhhhcCC-CCCEEEe--cccccCCc
Confidence 6888888632 33 3222 38899999999999999999986 22112210 1111 2577644 998863 3
Q ss_pred ceEEEEEeCCchhhh
Q 022564 264 RGAMIFFRKGVKEIN 278 (295)
Q Consensus 264 ~gG~l~~~~~~~~~~ 278 (295)
+.|++++++++.+..
T Consensus 280 pigav~~~~~i~~~~ 294 (443)
T PRK08360 280 PISATIGRAEIMDSL 294 (443)
T ss_pred eeEEEEEcHHHHhhh
Confidence 458888888766544
No 334
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=98.45 E-value=1.8e-05 Score=73.96 Aligned_cols=203 Identities=14% Similarity=0.084 Sum_probs=105.3
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCC-CCCcceeEEeCC-ChHHHHHHHHhh--c
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLD-PEKWGVNVQSLS-GSPSNFQVYTAL--L 133 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~-~~~~~~~v~~~s-G~~a~~~~~~al--~ 133 (295)
-.|++.+++.+.+.+....... ....+...++.+.+.+++... .+ .++|++ |+.|+.+++... .
T Consensus 71 ~~p~v~~Ai~~ql~~~~~~~~~--------~~~~~~~~~lAe~L~~~~p~~~~~----~v~f~~SGsEA~e~AlklAr~~ 138 (441)
T PRK05769 71 AHPKVVKAVKEQAEKFLHYSLT--------DFYYEPAVELAERLVEIAPGGFEK----KVFFTNSGTESNEAAIKIARYH 138 (441)
T ss_pred CCHHHHHHHHHHHHhccCccCc--------ccCCHHHHHHHHHHHHhCCCCCCC----EEEECCchHHHHHHHHHHHHHH
Confidence 3689999999888652110110 011122334557777766422 22 566655 444877666533 2
Q ss_pred CCCCeEEEecCCCCcccCccccc------ccc--ccccceeeeEEEeeecCC------CCC----CCCHHHHHH-HHh--
Q 022564 134 KPHDRIMALDLPHGGHLSHGYQT------DTK--KISAVSIFFETMPYRLNE------STG----YIDYDQLEK-SAT-- 192 (295)
Q Consensus 134 ~~gd~Vl~~~~~~~~~~~~~~~~------~~~--~~~~~g~~~~~v~~~~~~------~~~----~id~e~l~~-~i~-- 192 (295)
...++|+...-.|.+........ +.. .....| +..++.+... ++. .-+++.+++ .++
T Consensus 139 tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~ 216 (441)
T PRK05769 139 TGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPG--VIHVPYPNPYRNPWGIENPEECGNAVLDFIEDYLFKKL 216 (441)
T ss_pred hCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCC--eEEeCCCccccccccCCchHHHHHHHHHHHHHHHHhhc
Confidence 34567888776665543111100 000 001112 2223221100 000 012344665 222
Q ss_pred --hcCCcEEEEc--CCCCCCccC----HHHHHHHHHHcCCEEEEEccccccccccCC----CCCCCCcceEEEeCCCCCC
Q 022564 193 --LFRPKLIVAG--ASAYARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGV----IPSPFEYADVVTTTTHKSL 260 (295)
Q Consensus 193 --~~~tk~i~l~--~~n~~~~~~----l~~I~~ia~~~~~~vivD~a~~~g~~~~~~----~~~~~~~~D~~~~s~~K~l 260 (295)
..++.+|++- ..+.|...+ +++|.++|++||+++|+|++|. |.-..+. ...++ ..|++++ .|.+
T Consensus 217 ~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~t-G~gr~G~~~a~~~~gv-~pDivt~--~K~l 292 (441)
T PRK05769 217 VPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQT-GMGRTGKMFAIEHFGV-EPDIITL--AKAI 292 (441)
T ss_pred cCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-CCCcccceehhhccCC-CCCEEEE--cccc
Confidence 1256677764 333355556 9999999999999999999987 3322221 11111 2688865 5888
Q ss_pred CCC-ceEEEEEeCCchhhh
Q 022564 261 RGP-RGAMIFFRKGVKEIN 278 (295)
Q Consensus 261 ~gp-~gG~l~~~~~~~~~~ 278 (295)
++. +.|++++++++.+..
T Consensus 293 ~~G~p~gav~~~~~i~~~~ 311 (441)
T PRK05769 293 AGGLPLGAVIGRAELMFLP 311 (441)
T ss_pred cCCcccEEEEEehhhhhcC
Confidence 643 348888888875543
No 335
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=98.43 E-value=8e-06 Score=75.21 Aligned_cols=216 Identities=13% Similarity=0.023 Sum_probs=115.0
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCC-CCCcceeEEeCCChHHHHHHHHhh--cC
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLD-PEKWGVNVQSLSGSPSNFQVYTAL--LK 134 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~-~~~~~~~v~~~sG~~a~~~~~~al--~~ 134 (295)
-.|.|++++.+.+..-. ..... +..+ +...++.+.+.+.+-.+ .+ ...+.+||+.|+.+++... ..
T Consensus 73 ~hP~Vv~Av~~q~~~~~--h~~~~--~~~~----e~~v~~ae~L~~~~p~~~~~---~~~f~~sGaeA~E~AiKiAr~~T 141 (447)
T COG0160 73 NHPRVVEAVKRQLAKLN--HTHTR--DLYY----EPYVELAEKLTALAPGSGLK---KVFFGNSGAEAVEAAIKIARAYT 141 (447)
T ss_pred CCHHHHHHHHHHHHHhh--cccCC--cccc----hhHHHHHHHHHHhCCcccCC---eEEecCCcHHHHHHHHHHHHHHh
Confidence 47999999998775521 01111 1111 11122345666655442 32 1455566666888766544 33
Q ss_pred CCCeEEEecCCCCcccCcccc------ccccccccceeeeEEEeeecCCCC-C--------CCCHHHHHHHHhh-----c
Q 022564 135 PHDRIMALDLPHGGHLSHGYQ------TDTKKISAVSIFFETMPYRLNEST-G--------YIDYDQLEKSATL-----F 194 (295)
Q Consensus 135 ~gd~Vl~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~v~~~~~~~~-~--------~id~e~l~~~i~~-----~ 194 (295)
.+..|+.+.-.|.+...-... .++.+..-....+..+|++..... + .-..+.++..+.. .
T Consensus 142 gr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~i~~~~~~~~ 221 (447)
T COG0160 142 GRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIERALFDLEVGPE 221 (447)
T ss_pred CCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHHHHHHHHHHhhcCCCC
Confidence 456788888776554221111 111110111111344555422111 1 1123445554432 2
Q ss_pred CCcEEEEc--CCCCC----CccCHHHHHHHHHHcCCEEEEEccccccccccC-C---CCCCCCcceEEEeCCCCCCCCCc
Q 022564 195 RPKLIVAG--ASAYA----RLYDYERIRKVCNKQKAIMLADMAHISGLVAAG-V---IPSPFEYADVVTTTTHKSLRGPR 264 (295)
Q Consensus 195 ~tk~i~l~--~~n~~----~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~-~---~~~~~~~~D~~~~s~~K~l~gp~ 264 (295)
++.++++- ...-| ...-++++.++|++||+++|+|+.|. |.-..+ . +..++ -.|++++ .|.+++..
T Consensus 222 ~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQt-G~GRTG~~fa~E~~gv-~PDivt~--aK~ig~G~ 297 (447)
T COG0160 222 EVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQT-GFGRTGKMFAFEHFGV-EPDIVTL--AKSLGGGL 297 (447)
T ss_pred ceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCccccchhhhhcCC-CCCEEEe--cccccCCC
Confidence 46778773 22223 34458899999999999999999986 222211 1 11111 2788776 48887643
Q ss_pred e-EEEEEeCCchhhhccCCeeEEEe
Q 022564 265 G-AMIFFRKGVKEINKQGKEFTCRC 288 (295)
Q Consensus 265 g-G~l~~~~~~~~~~~~~~~~~~~~ 288 (295)
- |.+++|+++.+....+...+|++
T Consensus 298 Pl~avv~r~ei~~~~~g~~~~Tf~G 322 (447)
T COG0160 298 PLSAVVGRAEIMDWPPGGHGGTFGG 322 (447)
T ss_pred ceeEEeccHHhcccCCcccCCCCCc
Confidence 3 99999999877555556555543
No 336
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=98.42 E-value=2.2e-05 Score=73.42 Aligned_cols=206 Identities=18% Similarity=0.130 Sum_probs=104.9
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEe-CCChHHHHHHHHhhc---
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQS-LSGSPSNFQVYTALL--- 133 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~-~sG~~a~~~~~~al~--- 133 (295)
-.|++.+++.+.+.+ ....... .+ .+ +...++.+.+.+++....+ .+++ +||+.|+.+++....
T Consensus 63 ~~p~v~~ai~~ql~~-l~~~~~~--~~-~~----~~~~~la~~l~~~~p~~~~----~v~f~~sGseA~e~AlklAr~~~ 130 (442)
T PRK13360 63 GRPEIVEAVRAQAGE-LDYAPAF--QM-GH----PKAFELANRIAEIAPGGLN----HVFFTNSGSESVDTALKIALAYH 130 (442)
T ss_pred CCHHHHHHHHHHHHh-CCCcccC--Cc-CC----HHHHHHHHHHHHhCCCCCC----EEEEeCCcHHHHHHHHHHHHHHH
Confidence 478999999988765 2111110 01 11 2222355677776632222 4455 555557776655331
Q ss_pred ----C-CCCeEEEecCCCCcccCcccc-----ccccccccceeeeEEEeeecCCCC--CCC--------CHHHHHHHHhh
Q 022564 134 ----K-PHDRIMALDLPHGGHLSHGYQ-----TDTKKISAVSIFFETMPYRLNEST--GYI--------DYDQLEKSATL 193 (295)
Q Consensus 134 ----~-~gd~Vl~~~~~~~~~~~~~~~-----~~~~~~~~~g~~~~~v~~~~~~~~--~~i--------d~e~l~~~i~~ 193 (295)
. ...+|+.....|.+...-... ..+.........+..+|.+.+... +.. ..+++++++..
T Consensus 131 ~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~ 210 (442)
T PRK13360 131 RARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEHGAELADELERLVTL 210 (442)
T ss_pred HhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChHHHHHHHHHHHHHHHHh
Confidence 1 235788888766654211100 000000000001222332211000 110 24677777752
Q ss_pred ---cCCcEEEEc--CCCCCCccC----HHHHHHHHHHcCCEEEEEccc-cccccccC--CCCCCCCcceEEEeCCCCCCC
Q 022564 194 ---FRPKLIVAG--ASAYARLYD----YERIRKVCNKQKAIMLADMAH-ISGLVAAG--VIPSPFEYADVVTTTTHKSLR 261 (295)
Q Consensus 194 ---~~tk~i~l~--~~n~~~~~~----l~~I~~ia~~~~~~vivD~a~-~~g~~~~~--~~~~~~~~~D~~~~s~~K~l~ 261 (295)
.++.+|++. .+..|...+ +++|.++|++||+++|+|++| ++|-.... ....++ ..|++ +..|.++
T Consensus 211 ~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv-~PDiv--t~gK~l~ 287 (442)
T PRK13360 211 HDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAPFAAQYFGV-TPDLL--TCAKGLT 287 (442)
T ss_pred cCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCC-CCcee--eeeeccc
Confidence 245666664 333355566 999999999999999999998 34432211 111111 26776 5589886
Q ss_pred CC--ceEEEEEeCCchhhh
Q 022564 262 GP--RGAMIFFRKGVKEIN 278 (295)
Q Consensus 262 gp--~gG~l~~~~~~~~~~ 278 (295)
|. +-|.+++++++.+..
T Consensus 288 gG~~P~gav~~~~~i~~~~ 306 (442)
T PRK13360 288 NGAIPMGAVFVSSEIHDAF 306 (442)
T ss_pred cCccceEEEEEcHHHHHHh
Confidence 42 234466777765543
No 337
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=98.42 E-value=7.5e-06 Score=76.74 Aligned_cols=194 Identities=13% Similarity=0.091 Sum_probs=102.1
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeC-CChHHHHHHHHhh---c
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSL-SGSPSNFQVYTAL---L 133 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~-sG~~a~~~~~~al---~ 133 (295)
-.|++.+++.+.+.... . .+ .++ . .+....+.+.+.+++..+.+ .++|+ ||+.|+.+++... .
T Consensus 99 ~~p~v~~Ai~~ql~~l~-~--~~-~~~-~----~~~~~~lae~L~~~~p~~~~----~v~f~~SGsEAve~AlklAr~~t 165 (459)
T PRK11522 99 RNPVVVSAVQNQLAKQP-L--HS-QEL-L----DPLRAMLAKTLAALTPGKLK----YSFFCNSGTESVEAALKLAKAYQ 165 (459)
T ss_pred CCHHHHHHHHHHHhhCc-c--cc-ccc-C----CHHHHHHHHHHHHhCCCCCC----EEEEeCCchHHHHHHHHHHHHHh
Confidence 37899999998876521 1 11 111 1 22333355677776543333 45555 5555877665543 2
Q ss_pred C-C-CCeEEEecCCCCcccCccccccccc-cc--cce--eeeEEEeeecCCCCCCCCHHHHHHHHhh-----cCCcEEEE
Q 022564 134 K-P-HDRIMALDLPHGGHLSHGYQTDTKK-IS--AVS--IFFETMPYRLNESTGYIDYDQLEKSATL-----FRPKLIVA 201 (295)
Q Consensus 134 ~-~-gd~Vl~~~~~~~~~~~~~~~~~~~~-~~--~~g--~~~~~v~~~~~~~~~~id~e~l~~~i~~-----~~tk~i~l 201 (295)
. . ..+|+.....|.+........-... .. ... -.+..+| -.|.+++++.++. .++.++++
T Consensus 166 ~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~--------~~d~~~l~~~l~~~~~~~~~iAavIv 237 (459)
T PRK11522 166 SPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVP--------FGNIEAMRTALSECKKTGDDVAAVIL 237 (459)
T ss_pred ccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccC--------CCCHHHHHHHHHHhhccCCcEEEEEE
Confidence 1 2 3468877766655422111000000 00 000 0010111 1267888888752 24556666
Q ss_pred c--CCCCCCccC----HHHHHHHHHHcCCEEEEEccccccccccCC----CCCCCCcceEEEeCCCCCCCCC--ceEEEE
Q 022564 202 G--ASAYARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGV----IPSPFEYADVVTTTTHKSLRGP--RGAMIF 269 (295)
Q Consensus 202 ~--~~n~~~~~~----l~~I~~ia~~~~~~vivD~a~~~g~~~~~~----~~~~~~~~D~~~~s~~K~l~gp--~gG~l~ 269 (295)
. .++.|...| ++++.++|++||+++|+|++|. |.-..+. ...++ ..|++ +..|.++|. +-|.++
T Consensus 238 Epv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~t-G~GRtG~~~a~e~~gv-~PDiv--t~gK~lggG~~Pigav~ 313 (459)
T PRK11522 238 EPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQT-GMGRTGKMFACEHENV-QPDIL--CLAKALGGGVMPIGATI 313 (459)
T ss_pred ecccCCCCCccCCHHHHHHHHHHHHHcCCEEEecccee-cCCccchhhhhhccCC-CCCEE--EechhhhCCCccceeEE
Confidence 4 333355555 9999999999999999999985 3211111 11111 26877 558998753 235555
Q ss_pred EeCCchh
Q 022564 270 FRKGVKE 276 (295)
Q Consensus 270 ~~~~~~~ 276 (295)
+++++.+
T Consensus 314 ~~~~i~~ 320 (459)
T PRK11522 314 ATEEVFS 320 (459)
T ss_pred EcHHHHH
Confidence 5566544
No 338
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=98.40 E-value=9e-06 Score=75.18 Aligned_cols=202 Identities=14% Similarity=0.122 Sum_probs=100.9
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeC-CChHHHHHHHHhhc---
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSL-SGSPSNFQVYTALL--- 133 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~-sG~~a~~~~~~al~--- 133 (295)
-.|.+.+++.+.+.+... .+.. +. .+...++.+.+.++.... + .++++ ||+.|+..++....
T Consensus 57 ~~p~v~~ai~~q~~~~~~---~~~~-~~-----~~~~~~la~~L~~~~~~~-~----~v~f~~sGseA~e~AlklAr~~~ 122 (408)
T PRK04612 57 NDPDLVAALTEQAGKLWH---TSNV-FY-----SAPPLKLAEELVTASRFA-E----KVFLCNSGTEANEAAIKLVRKWA 122 (408)
T ss_pred CCHHHHHHHHHHHHhccc---cccc-cC-----CHHHHHHHHHHHhhCCCC-C----EEEEcCchHHHHHHHHHHHHHHH
Confidence 478999999988765221 1110 11 112223446666655322 2 45555 55557776654331
Q ss_pred ---C--C-CCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCC-
Q 022564 134 ---K--P-HDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY- 206 (295)
Q Consensus 134 ---~--~-gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~- 206 (295)
. + ..+|+.....|.+................+ +...+-.+. .-.-.|++.+++.+...++.++++.+.+.
T Consensus 123 ~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~--~~~~~~~~~-~~~~~d~~~l~~~~~~~~~aavi~eP~~~~ 199 (408)
T PRK04612 123 SSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEG--YEPLPGGFR-YVDFNDVEALEAAMAGGDVAAVMLEPIQGE 199 (408)
T ss_pred HhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccC--CCCCCCCce-EcCCCCHHHHHHhhCCCCEEEEEECCccCC
Confidence 1 1 246888876665543211100000000000 000000000 00023789999888643556666643222
Q ss_pred C-C----ccCHHHHHHHHHHcCCEEEEEccccccccccCC-CCCCCCcceEEEeCCCCCCCC-CceEEEEEeCCchhh
Q 022564 207 A-R----LYDYERIRKVCNKQKAIMLADMAHISGLVAAGV-IPSPFEYADVVTTTTHKSLRG-PRGAMIFFRKGVKEI 277 (295)
Q Consensus 207 ~-~----~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~-~~~~~~~~D~~~~s~~K~l~g-p~gG~l~~~~~~~~~ 277 (295)
+ . ..-+++|.++|++||+++|+|++|. |.-..+. ......+...-+.++.|.+++ .+-|++++++++.+.
T Consensus 200 gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-g~gr~G~~~a~~~~~~~pdi~t~~K~l~~G~piga~~~~~~~~~~ 276 (408)
T PRK04612 200 GGVMPAAPGFLARVRALCDQHDALLVLDEIQC-GMGRTGTLFAHWQEQVTPDIVTLAKALGGGFPIGAMLAGPKVAET 276 (408)
T ss_pred CCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCCchhhhhhcCCCCCEEEEcchhcCCCceEEEEECHHHHhh
Confidence 2 2 1238899999999999999999986 3222221 000001233345566898853 233677777665443
No 339
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=98.40 E-value=1.2e-05 Score=74.51 Aligned_cols=201 Identities=12% Similarity=0.074 Sum_probs=103.7
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCC--CCCcceeEEe--CCChHHHHHHHHhh-
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLD--PEKWGVNVQS--LSGSPSNFQVYTAL- 132 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~--~~~~~~~v~~--~sG~~a~~~~~~al- 132 (295)
-.|++.+++.+.+.+.. +.....+ . .+...++.+.+.+....+ .+. .++| +||+.|+..++...
T Consensus 52 ~~p~v~~ai~~ql~~~~---~~~~~~~-~----~~~~~~lae~l~~~~~~~~~~~~---~~~f~~~sGseA~e~AlklAr 120 (412)
T TIGR02407 52 NNPKLKQALIDYLADDG---IIHSLDM-A----TEAKREFLETFNEIILKPRGLDY---KVQFPGPTGTNAVESALKLAR 120 (412)
T ss_pred CCHHHHHHHHHHHhhcc---ceecccc-C----cHHHHHHHHHHHHhccCccCCCc---eEEEeCCCchHHHHHHHHHHh
Confidence 48999999998876411 1100001 1 122223446666553211 110 3444 57887777665544
Q ss_pred -cCCCCeEEEecCCCCcccCccccc-----cccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhh-----cCCcEEEE
Q 022564 133 -LKPHDRIMALDLPHGGHLSHGYQT-----DTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL-----FRPKLIVA 201 (295)
Q Consensus 133 -~~~gd~Vl~~~~~~~~~~~~~~~~-----~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~-----~~tk~i~l 201 (295)
.....+|+.....|.+........ +..........+..+|++.......-+++.+++.+.+ .++.+|++
T Consensus 121 ~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~~aavi~ 200 (412)
T TIGR02407 121 KVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSSGVDLPAAVIL 200 (412)
T ss_pred hhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHhccCCCCceEEEEe
Confidence 234467888876665543211110 0111000000122233210000001247778888863 24577777
Q ss_pred c-CCCC-C----CccCHHHHHHHHHHcCCEEEEEcccc-cccc----ccCCCCCCCCcceEEEeCCCCCCCC-C-ceEEE
Q 022564 202 G-ASAY-A----RLYDYERIRKVCNKQKAIMLADMAHI-SGLV----AAGVIPSPFEYADVVTTTTHKSLRG-P-RGAMI 268 (295)
Q Consensus 202 ~-~~n~-~----~~~~l~~I~~ia~~~~~~vivD~a~~-~g~~----~~~~~~~~~~~~D~~~~s~~K~l~g-p-~gG~l 268 (295)
. ..+. | ...-+++|.++|++||+++|.|+++. +|-. ....... ..|+++++ |++++ . +-|++
T Consensus 201 Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~~~~~v---~PDi~~~~--K~lg~~G~pigav 275 (412)
T TIGR02407 201 ETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGTFFSFEPAGI---EPDIVCLS--KSISGYGLPLALT 275 (412)
T ss_pred ccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhHHhcccCC---CCCEEEec--hhccCCccceeEE
Confidence 4 2222 2 34458899999999999999999986 2211 1111112 27887754 99854 2 23888
Q ss_pred EEeCCc
Q 022564 269 FFRKGV 274 (295)
Q Consensus 269 ~~~~~~ 274 (295)
++++++
T Consensus 276 ~~~~~~ 281 (412)
T TIGR02407 276 LIKPEL 281 (412)
T ss_pred EEchhh
Confidence 888776
No 340
>PRK06062 hypothetical protein; Provisional
Probab=98.39 E-value=1.1e-05 Score=75.45 Aligned_cols=202 Identities=12% Similarity=0.070 Sum_probs=105.9
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeC-CChHHHHHHHHhh--cC
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSL-SGSPSNFQVYTAL--LK 134 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~-sG~~a~~~~~~al--~~ 134 (295)
-.|++.+++.+.+.... ...+ .+ ..+...++.+.+.++.....+ .++|+ ||+.|+.+++... ..
T Consensus 70 ~~p~v~~Ai~~q~~~~~-~~~~---~~-----~~~~~~~lae~L~~~~p~~~~----~v~f~~SGsEAve~AlklAr~~t 136 (451)
T PRK06062 70 QHPKVVAAIQEQAARLC-TVAP---AH-----ANDARSEAARLIAERAPGDLS----KVFFTNGGADANEHAVRMARLHT 136 (451)
T ss_pred CCHHHHHHHHHHHHhcC-CcCC---cc-----CCHHHHHHHHHHHHhCCCCCC----EEEEcCChHHHHHHHHHHHHHhh
Confidence 47899999998876521 1111 01 112223355677776643333 45655 4555877666543 23
Q ss_pred CCCeEEEecCCCCcccCcccccc-----cc-ccccceeeeEEEeeecCCC-CC--CCC-------HHHHHHHHhh---cC
Q 022564 135 PHDRIMALDLPHGGHLSHGYQTD-----TK-KISAVSIFFETMPYRLNES-TG--YID-------YDQLEKSATL---FR 195 (295)
Q Consensus 135 ~gd~Vl~~~~~~~~~~~~~~~~~-----~~-~~~~~g~~~~~v~~~~~~~-~~--~id-------~e~l~~~i~~---~~ 195 (295)
...+|+.....|.+........- .. .....+ +..++.+.... .+ .-| +++++++++. .+
T Consensus 137 gr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~--~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~ 214 (451)
T PRK06062 137 GRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAG--VVHFFGPFLYRSEFHATTEEEECERALAHLERVIELEGPST 214 (451)
T ss_pred CCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCC--CEEeCCCCccccccCCCChHHHHHHHHHHHHHHHHhcCCCc
Confidence 44678888766655531111100 00 000111 11121111000 00 012 6778888752 24
Q ss_pred CcEEEEc--CCCCCCccC----HHHHHHHHHHcCCEEEEEccccccccccC----CCCCCCCcceEEEeCCCCCCCCC--
Q 022564 196 PKLIVAG--ASAYARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAG----VIPSPFEYADVVTTTTHKSLRGP-- 263 (295)
Q Consensus 196 tk~i~l~--~~n~~~~~~----l~~I~~ia~~~~~~vivD~a~~~g~~~~~----~~~~~~~~~D~~~~s~~K~l~gp-- 263 (295)
+.+|++- ..+-|...+ +++|.++|++||+++|+|++|. |.-..+ ....++ ..|+++ ..|.++|.
T Consensus 215 iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~t-GfGRtG~~~a~~~~gv-~PDi~t--~gK~lggG~~ 290 (451)
T PRK06062 215 IAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMA-GFGRTGKWFAIEHFGV-VPDLIT--FAKGVNSGYV 290 (451)
T ss_pred eEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeecccc-CCCcCcHHHHHHhcCC-CCCeee--echhhhcCCc
Confidence 5677774 333345555 9999999999999999999987 221111 111111 278665 58998763
Q ss_pred ceEEEEEeCCchhhh
Q 022564 264 RGAMIFFRKGVKEIN 278 (295)
Q Consensus 264 ~gG~l~~~~~~~~~~ 278 (295)
+-|.+++++++.+..
T Consensus 291 Pigav~~~~~i~~~~ 305 (451)
T PRK06062 291 PLGGVAISEAIAATF 305 (451)
T ss_pred CcEEEEEcHHHHHHh
Confidence 235555666766544
No 341
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=98.38 E-value=2.2e-05 Score=73.48 Aligned_cols=204 Identities=11% Similarity=0.052 Sum_probs=105.2
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCC-CCCcceeEEeCCChHHHHHHHHhh--cC
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLD-PEKWGVNVQSLSGSPSNFQVYTAL--LK 134 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~-~~~~~~~v~~~sG~~a~~~~~~al--~~ 134 (295)
-.|++.+++.+.+.+ ... +... ... .+...++.+.+.+.+... .+. ..+.+||+.|+.+++... ..
T Consensus 73 ~~p~v~~ai~~q~~~-~~~-~~~~--~~~----~~~~~~la~~l~~~~p~~~~~~---v~f~~sGseA~e~AlklAr~~t 141 (443)
T PRK06058 73 SAPRVVEAVREQVAR-FTH-TCFM--VTP----YEGYVAVAEQLNRLTPGDHEKR---SALFNSGAEAVENAVKIARSYT 141 (443)
T ss_pred CCHHHHHHHHHHHHh-ccC-cccc--ccC----CHHHHHHHHHHHHhCCCCCCCE---EEEeCCcHHHHHHHHHHHHHhh
Confidence 478999999988865 210 0000 011 122333557777776532 121 455667766777666522 23
Q ss_pred CCCeEEEecCCCCcccCccccc------ccccc--ccceeeeEEEeeecCCCC---CCC--------CHHHHHHHHhhcC
Q 022564 135 PHDRIMALDLPHGGHLSHGYQT------DTKKI--SAVSIFFETMPYRLNEST---GYI--------DYDQLEKSATLFR 195 (295)
Q Consensus 135 ~gd~Vl~~~~~~~~~~~~~~~~------~~~~~--~~~g~~~~~v~~~~~~~~---~~i--------d~e~l~~~i~~~~ 195 (295)
..++|+.....|.+.......+ ++.+. ...+ +..++++....+ ... .++.+++.+...+
T Consensus 142 gr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 219 (443)
T PRK06058 142 GRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPE--VYRAPMSYPYRDPKGLATDGEEAAARAITVIEKQVGADN 219 (443)
T ss_pred CCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCC--ceEcCCCcccccccccccchHHHHHHHHHHHHHhhCCCc
Confidence 4478998887776653111100 01000 0011 111221111000 011 1233344443236
Q ss_pred CcEEEEcC--CCCCCc----cCHHHHHHHHHHcCCEEEEEccccccccccC-C---CCCCCCcceEEEeCCCCCCCC-Cc
Q 022564 196 PKLIVAGA--SAYARL----YDYERIRKVCNKQKAIMLADMAHISGLVAAG-V---IPSPFEYADVVTTTTHKSLRG-PR 264 (295)
Q Consensus 196 tk~i~l~~--~n~~~~----~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~-~---~~~~~~~~D~~~~s~~K~l~g-p~ 264 (295)
+.+|++.+ .+.|.. .-+++|.++|++||+++|.|+++. |.-..+ . ...++ ..|+++++ |.++| .+
T Consensus 220 iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~t-GfgRtG~~fa~~~~gv-~PDiv~~g--K~l~~G~P 295 (443)
T PRK06058 220 LAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQT-GFARTGAWFACEHEGI-VPDLITTA--KGIAGGLP 295 (443)
T ss_pred eEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcChhhhHHHhcCC-CCCEEEEc--ccccCCCc
Confidence 77787742 222322 238999999999999999999976 332221 1 11111 26888874 98864 33
Q ss_pred eEEEEEeCCchhhh
Q 022564 265 GAMIFFRKGVKEIN 278 (295)
Q Consensus 265 gG~l~~~~~~~~~~ 278 (295)
-|++++++++.+..
T Consensus 296 i~av~~~~~i~~~~ 309 (443)
T PRK06058 296 LSAVTGRAEIMDAP 309 (443)
T ss_pred cEEEEEcHHHHhhc
Confidence 48888888876544
No 342
>PRK06541 hypothetical protein; Provisional
Probab=98.35 E-value=2.1e-05 Score=73.87 Aligned_cols=203 Identities=11% Similarity=0.030 Sum_probs=103.6
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEe-CCChHHHHHHHHhhc---
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQS-LSGSPSNFQVYTALL--- 133 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~-~sG~~a~~~~~~al~--- 133 (295)
-.|.+.+++.+.+.+.. .... . .+. .+...++.+.+.+++..+.+ .+++ +||+.|+.+++....
T Consensus 69 ~~p~v~~Av~~q~~~~~-~~~~-~-~~~-----~~~~~~la~~l~~~~p~~~~----~v~f~~sGseAve~AlklAr~~~ 136 (460)
T PRK06541 69 GRAELAEAAAKQAGTLA-FFPL-W-SYA-----HPPAIELAERLAALAPGDLN----RVFFTTGGSEAVESAWKLAKQYF 136 (460)
T ss_pred CCHHHHHHHHHHHhhCc-Cccc-c-ccC-----CHHHHHHHHHHHHhCCCCcC----EEEEcCCcHHHHHHHHHHHHHHH
Confidence 47899999998886521 0100 0 011 12222355667676543333 4555 555557776555321
Q ss_pred --C---CCCeEEEecCCCCcccCccccc-----ccc--ccccceeeeEEEeeecCCC--CCCCC--------HHHHHHHH
Q 022564 134 --K---PHDRIMALDLPHGGHLSHGYQT-----DTK--KISAVSIFFETMPYRLNES--TGYID--------YDQLEKSA 191 (295)
Q Consensus 134 --~---~gd~Vl~~~~~~~~~~~~~~~~-----~~~--~~~~~g~~~~~v~~~~~~~--~~~id--------~e~l~~~i 191 (295)
. ...+|+...-.|.+........ +.. .....| +..++.+.... .+.-| ++.+++.+
T Consensus 137 ~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 214 (460)
T PRK06541 137 KLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPG--GFRVPNTNFYRAPELGDDPEAFGRWAADRIEEAI 214 (460)
T ss_pred HhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCC--cEEeCCCccccccccCCCHHHHHHHHHHHHHHHH
Confidence 1 2467888876665543211111 000 000111 11222211000 01112 36777777
Q ss_pred hh---cCCcEEEEcC-CCC-CCccC----HHHHHHHHHHcCCEEEEEccc-cccccccC--CCCCCCCcceEEEeCCCCC
Q 022564 192 TL---FRPKLIVAGA-SAY-ARLYD----YERIRKVCNKQKAIMLADMAH-ISGLVAAG--VIPSPFEYADVVTTTTHKS 259 (295)
Q Consensus 192 ~~---~~tk~i~l~~-~n~-~~~~~----l~~I~~ia~~~~~~vivD~a~-~~g~~~~~--~~~~~~~~~D~~~~s~~K~ 259 (295)
+. .++.+|++.+ .+. |...+ +++|.++|++||+++|+|++| ++|-.... ....++ ..|+++ ..|.
T Consensus 215 ~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G~~~a~~~~gv-~PDivt--~gK~ 291 (460)
T PRK06541 215 EFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEMFGCERFGY-VPDIIT--CAKG 291 (460)
T ss_pred HhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchhhhhhhcCC-CCCEEE--eccc
Confidence 52 2345555542 233 45555 999999999999999999998 45532211 111111 268775 6898
Q ss_pred CCCC--ceEEEEEeCCchhh
Q 022564 260 LRGP--RGAMIFFRKGVKEI 277 (295)
Q Consensus 260 l~gp--~gG~l~~~~~~~~~ 277 (295)
+++. +-|.+++++++.+.
T Consensus 292 l~~G~~pigav~~~~~i~~~ 311 (460)
T PRK06541 292 ITSGYSPLGAMIASDRLFEP 311 (460)
T ss_pred ccCCccceeEEEEcHHHHHH
Confidence 8752 23666666665443
No 343
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=98.34 E-value=1.9e-05 Score=73.34 Aligned_cols=205 Identities=12% Similarity=0.046 Sum_probs=107.9
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCC-CCCcceeEEeCCChHHHHHHHHhh--cC
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLD-PEKWGVNVQSLSGSPSNFQVYTAL--LK 134 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~-~~~~~~~v~~~sG~~a~~~~~~al--~~ 134 (295)
-.|++.+++.+.+.... +.....+ . .+...++.+.+.+..... .+. ..+.+||+.|+.+++... ..
T Consensus 57 ~~p~v~~ai~~ql~~~~---~~~~~~~-~----~~~~~~la~~l~~~~p~~~~~~---~~f~~sGseA~e~AlklAr~~t 125 (421)
T PRK09792 57 RHPDLVAAVEQQLQQFT---HTAYQIV-P----YESYVTLAEKINALAPVSGQAK---TAFFTTGAEAVENAVKIARAHT 125 (421)
T ss_pred CCHHHHHHHHHHHHhcc---CcccCcc-C----CHHHHHHHHHHHHhCCCCCCce---EEEeCChHHHHHHHHHHHHHhc
Confidence 47899999998886521 1100000 1 122223446666665422 121 455567777777655543 23
Q ss_pred CCCeEEEecCCCCcccCccccc------cccccccceeeeEEEeeecCCCCC--CCCHHHHHHHHhh----cCCcEEEEc
Q 022564 135 PHDRIMALDLPHGGHLSHGYQT------DTKKISAVSIFFETMPYRLNESTG--YIDYDQLEKSATL----FRPKLIVAG 202 (295)
Q Consensus 135 ~gd~Vl~~~~~~~~~~~~~~~~------~~~~~~~~g~~~~~v~~~~~~~~~--~id~e~l~~~i~~----~~tk~i~l~ 202 (295)
...+|+.....|.+........ ++.+....-..+..++++.+.... .-+++++++.++. .++++|++.
T Consensus 126 gr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iaavi~E 205 (421)
T PRK09792 126 GRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDLHGISTQDSLDAIERLFKSDIEAKQVAAIIFE 205 (421)
T ss_pred CCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhccCCCceEEEEEc
Confidence 3457888887665542111110 011100000012334443321110 1135788888752 356788886
Q ss_pred CC-CC-CC-ccC---HHHHHHHHHHcCCEEEEEccccccccccCC----CCCCCCcceEEEeCCCCCCCC-CceEEEEEe
Q 022564 203 AS-AY-AR-LYD---YERIRKVCNKQKAIMLADMAHISGLVAAGV----IPSPFEYADVVTTTTHKSLRG-PRGAMIFFR 271 (295)
Q Consensus 203 ~~-n~-~~-~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~----~~~~~~~~D~~~~s~~K~l~g-p~gG~l~~~ 271 (295)
+. ++ |. ..| +++|.++|++||+++|+|+++.. .-..+. ...+ ...|+ .+..|.+++ .+-|+++++
T Consensus 206 Pvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg-~gr~G~~~a~~~~~-~~pDi--~t~gK~l~~G~pigav~~~ 281 (421)
T PRK09792 206 PVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSG-FARTGKLFAMDHYA-DKPDL--MTMAKSLAGGMPLSGVVGN 281 (421)
T ss_pred cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccC-CCCCCchhHHHhcC-CCCcE--EEeehhhcCCCceEEEEEc
Confidence 33 22 32 334 88999999999999999999762 211221 1111 12675 566898864 334888888
Q ss_pred CCchhh
Q 022564 272 KGVKEI 277 (295)
Q Consensus 272 ~~~~~~ 277 (295)
+++.+.
T Consensus 282 ~~i~~~ 287 (421)
T PRK09792 282 ANIMDA 287 (421)
T ss_pred HHHHhc
Confidence 887654
No 344
>PRK12566 glycine dehydrogenase; Provisional
Probab=98.32 E-value=3.1e-06 Score=83.95 Aligned_cols=154 Identities=21% Similarity=0.172 Sum_probs=98.0
Q ss_pred HHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhh-cC--CCCeEEEecCCCCcccCccccccccccccceeeeEEE
Q 022564 96 LCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTAL-LK--PHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETM 171 (295)
Q Consensus 96 ~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al-~~--~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v 171 (295)
+.+..++++.|.+.. +-..-.|++ +-.+++++. .. +..+|++++..|+.+...... -+...| ++++
T Consensus 128 e~Qtmi~~LtGm~va----NASl~D~atA~aEA~~ma~~~~~~k~~~~~v~~~~hP~~~~v~~t----~~~~~g--~~i~ 197 (954)
T PRK12566 128 NFQQMTIDLTGLDLA----NASLLDEATAAAEAMALAKRVAKSKSNRFFVDEHCHPQTLSVLRT----RAEGFG--FELV 197 (954)
T ss_pred HHHHHHHHHhCchhh----hhhhccchhHHHHHHHHHHHHhhcCCCEEEECCCCCHHHHHHHHH----hhhcCC--cEEE
Confidence 477899999999863 545555666 223333343 22 256899998777665432210 111223 2222
Q ss_pred eeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCC-CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCC-cc
Q 022564 172 PYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY-ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE-YA 249 (295)
Q Consensus 172 ~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~-~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~-~~ 249 (295)
.+++++.+.+ ++..+++.+||+ |.+.|+++|.+++|++|.+++ +++. .+...+...|-. |+
T Consensus 198 ------------~~~~~~~~~~-~~~~v~vq~P~~~G~i~d~~~i~~~~h~~gal~~-~~~d---~laL~ll~~Pge~GA 260 (954)
T PRK12566 198 ------------VDAVDNLAAH-AVFGALLQYPDTHGEIRDLRPLIDQLHGQQALAC-VAAD---LLSLLVLTPPGELGA 260 (954)
T ss_pred ------------EcchhhcCCC-CEEEEEEECCCCceEEccHHHHHHHHHHcCCEEE-EEeC---HHHHhCCCChhhcCC
Confidence 1334445544 688888887666 788899999999999999855 4442 233333333333 79
Q ss_pred eEEEeCCC-----CCCCCCceEEEEEeCCchh
Q 022564 250 DVVTTTTH-----KSLRGPRGAMIFFRKGVKE 276 (295)
Q Consensus 250 D~~~~s~~-----K~l~gp~gG~l~~~~~~~~ 276 (295)
|+++++++ -.|+||..|++.+++++..
T Consensus 261 DI~vG~~Q~fGvp~~~GGP~ag~~a~~~~~~R 292 (954)
T PRK12566 261 DVVLGSTQRFGVPMGYGGPHAAYFACRDDYKR 292 (954)
T ss_pred cEEeeCCCcCCCCCCCCCCCeeeeeehHHHHh
Confidence 99998776 4678888899999997643
No 345
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=98.31 E-value=4.9e-05 Score=72.11 Aligned_cols=207 Identities=14% Similarity=0.076 Sum_probs=104.5
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcC-CCCCCcceeEE-eCCChHHHHHHHHhhc--
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR-LDPEKWGVNVQ-SLSGSPSNFQVYTALL-- 133 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g-~~~~~~~~~v~-~~sG~~a~~~~~~al~-- 133 (295)
-.|++.+++.+.+.+ +..... .+.. ..+...++.+.+.+++. .+.+ .++ ..||+.|+.+++....
T Consensus 106 ~hp~v~~Av~~ql~~-~~~~~~---~~~~---~~~~~~~lae~L~~~~~~~~~~----~v~f~~SGsEA~e~AlKlAr~~ 174 (504)
T PLN02760 106 SEPRLVAAATEQLNK-LPFYHS---FWNR---TTKPSLDLAKELLEMFTARKMG----KVFFTNSGSEANDTQVKLVWYY 174 (504)
T ss_pred CCHHHHHHHHHHHhh-ccceec---cccc---CcHHHHHHHHHHHhhcCCCCCC----EEEEeCChHHHHHHHHHHHHHH
Confidence 479999999998865 211110 0000 11222334566666643 2322 344 4566668887666542
Q ss_pred -----CC-CCeEEEecCCCCcccCccccccccccc--cce---eeeEEEeeecCCC----CC------CCCHHHHHHHHh
Q 022564 134 -----KP-HDRIMALDLPHGGHLSHGYQTDTKKIS--AVS---IFFETMPYRLNES----TG------YIDYDQLEKSAT 192 (295)
Q Consensus 134 -----~~-gd~Vl~~~~~~~~~~~~~~~~~~~~~~--~~g---~~~~~v~~~~~~~----~~------~id~e~l~~~i~ 192 (295)
.+ ..+|+..+-.|.+.......+...... ..+ ..+..++++.... .. ....+++++++.
T Consensus 175 ~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~ 254 (504)
T PLN02760 175 NNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLPGETEEEFSTRLADNLENLIL 254 (504)
T ss_pred HHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCCcccccCCCCCcHHHHHHHHHHHHHHHHH
Confidence 12 357888776665542111100000000 000 0011122110000 00 011245777664
Q ss_pred h---cCCcEEEEc--CCCCCCccC----HHHHHHHHHHcCCEEEEEccc-cccccccC--CCCCCCCcceEEEeCCCCCC
Q 022564 193 L---FRPKLIVAG--ASAYARLYD----YERIRKVCNKQKAIMLADMAH-ISGLVAAG--VIPSPFEYADVVTTTTHKSL 260 (295)
Q Consensus 193 ~---~~tk~i~l~--~~n~~~~~~----l~~I~~ia~~~~~~vivD~a~-~~g~~~~~--~~~~~~~~~D~~~~s~~K~l 260 (295)
. .++.+|++- ..+.|...| +++|.++|++||+++|+|++| ++|-.... ....++ ..|++++ .|.+
T Consensus 255 ~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~a~e~~gv-~PDivtl--gK~l 331 (504)
T PLN02760 255 KEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGTMFGCDKYNI-KPDLVSL--AKAL 331 (504)
T ss_pred hcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccchhhHHHhcCC-CCcEEEe--cccc
Confidence 2 245677764 333355555 999999999999999999998 45443321 111221 2786554 7988
Q ss_pred CCC--ceEEEEEeCCchhhh
Q 022564 261 RGP--RGAMIFFRKGVKEIN 278 (295)
Q Consensus 261 ~gp--~gG~l~~~~~~~~~~ 278 (295)
+|. +-|.+++++++.+..
T Consensus 332 ggG~~PigAv~~~~~i~d~~ 351 (504)
T PLN02760 332 SSAYMPIGAVLVSPEISDVI 351 (504)
T ss_pred cCCccccceEeecHHHHhhh
Confidence 653 235577888876654
No 346
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=98.27 E-value=5.7e-05 Score=70.27 Aligned_cols=204 Identities=15% Similarity=0.081 Sum_probs=105.7
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeC-CChHHHHHHHHhh--cC
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSL-SGSPSNFQVYTAL--LK 134 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~-sG~~a~~~~~~al--~~ 134 (295)
-.|++.+++.+.+.+.. ..... .+ . .+...++.+.+.+.+...... .++++ ||+.|+.+++... ..
T Consensus 57 ~~p~v~~ai~~ql~~l~-~~~~~--~~-~----~~~~~~la~~l~~~~p~~~~~---~v~f~~SGseA~e~AlklAr~~t 125 (425)
T PRK07495 57 RHPRVIAAVKAQLDRFT-HTCHQ--VV-P----YENYVRLAERLNALVPGDFAK---KTIFVTTGAEAVENAVKIARAAT 125 (425)
T ss_pred CCHHHHHHHHHHHhhcc-CcccC--cc-C----CHHHHHHHHHHHHhCCCCCCC---EEEECCchHHHHHHHHHHHHHhh
Confidence 47899999998876521 00000 01 1 112222456676666432111 45555 5555877665543 23
Q ss_pred CCCeEEEecCCCCcccCcccc------cccccc--ccceeeeEEEeeecCCCCC--CCCHHHHHHHHhh----cCCcEEE
Q 022564 135 PHDRIMALDLPHGGHLSHGYQ------TDTKKI--SAVSIFFETMPYRLNESTG--YIDYDQLEKSATL----FRPKLIV 200 (295)
Q Consensus 135 ~gd~Vl~~~~~~~~~~~~~~~------~~~~~~--~~~g~~~~~v~~~~~~~~~--~id~e~l~~~i~~----~~tk~i~ 200 (295)
...+|+.....|.+....... .++.+. ...+ +..+|++.+.... .-+++++++.+.. .++++|+
T Consensus 126 gr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~iaavi 203 (425)
T PRK07495 126 GRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPD--VYHVPFPVELHGVSVEQSLAALDKLFKADVDPQRVAAII 203 (425)
T ss_pred CCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCC--eEEecCCcccccccHHHHHHHHHHHHHhccCCCceEEEE
Confidence 456788887666554211110 011110 0111 2234433221100 0124556776641 2567888
Q ss_pred Ec--CCCCC----CccCHHHHHHHHHHcCCEEEEEccccccccccCC----CCCCCCcceEEEeCCCCCCCC-CceEEEE
Q 022564 201 AG--ASAYA----RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGV----IPSPFEYADVVTTTTHKSLRG-PRGAMIF 269 (295)
Q Consensus 201 l~--~~n~~----~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~----~~~~~~~~D~~~~s~~K~l~g-p~gG~l~ 269 (295)
+. ..+.| ...-+++|.++|++||+++|.|++|. |.-..+. ...+ ...|+ .+..|.+++ -+.|+++
T Consensus 204 ~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-G~gr~G~~~a~~~~g-v~pDi--~tlsK~l~~G~pigav~ 279 (425)
T PRK07495 204 IEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQT-GFARTGKLFAMEHHE-VAADL--TTMAKGLAGGFPLAAVT 279 (425)
T ss_pred ECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-cCCcCCCceeecccC-CCCCE--EeehhhhcCCccceEEE
Confidence 74 33323 23348899999999999999999986 4322221 1111 02455 555898854 3458888
Q ss_pred EeCCchhhh
Q 022564 270 FRKGVKEIN 278 (295)
Q Consensus 270 ~~~~~~~~~ 278 (295)
+++++.+..
T Consensus 280 ~~~~i~~~~ 288 (425)
T PRK07495 280 GRAEIMDAP 288 (425)
T ss_pred EcHHHHhcc
Confidence 888876543
No 347
>PRK06105 aminotransferase; Provisional
Probab=98.27 E-value=6.2e-05 Score=70.70 Aligned_cols=204 Identities=13% Similarity=0.040 Sum_probs=106.3
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEe-CCChHHHHHHHHhhc---
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQS-LSGSPSNFQVYTALL--- 133 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~-~sG~~a~~~~~~al~--- 133 (295)
-+|++.+++.+.+.+ ........ ....+...++.+.+.+++..+.+ .+++ .||+.|+.+++....
T Consensus 65 ~~p~i~~Ai~~q~~~-~~~~~~~~------~~~~~~~~~lae~L~~~~p~~~~----~v~f~~SGseAve~AlKlar~~~ 133 (460)
T PRK06105 65 SEQRLVEAAARQMKK-LPFYHTFS------HKSHGPVIDLAEKLVAMAPVPMS----KVFFTNSGSEANDTVVKLVWYYN 133 (460)
T ss_pred CCHHHHHHHHHHHHh-CCCeeccc------ccCCHHHHHHHHHHHHhCCCCCC----EEEEeCCcHHHHHHHHHHHHHHH
Confidence 478999999998875 21000100 01112223355777777654333 4555 556558876666431
Q ss_pred -----CCCCeEEEecCCCCcccCcccccc-----ccc--cccceeeeEEEeeecCCC---CC-------CCCHHHHHHHH
Q 022564 134 -----KPHDRIMALDLPHGGHLSHGYQTD-----TKK--ISAVSIFFETMPYRLNES---TG-------YIDYDQLEKSA 191 (295)
Q Consensus 134 -----~~gd~Vl~~~~~~~~~~~~~~~~~-----~~~--~~~~g~~~~~v~~~~~~~---~~-------~id~e~l~~~i 191 (295)
....+|+.....|.+...-....- ++. ....+ +..++.+.... .+ ...++++++++
T Consensus 134 ~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~--~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~~ 211 (460)
T PRK06105 134 NALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDR--ILHTGCPHYYRFGLPGESEEAFATRLANELEALI 211 (460)
T ss_pred HhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCC--CEEcCCCcccccccCCCChHHHHHHHHHHHHHHH
Confidence 123578887766655432111100 000 00011 11122211000 00 01246677777
Q ss_pred hh---cCCcEEEEc--CCCCCCccC----HHHHHHHHHHcCCEEEEEcccc-cccccc--CCCCCCCCcceEEEeCCCCC
Q 022564 192 TL---FRPKLIVAG--ASAYARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAA--GVIPSPFEYADVVTTTTHKS 259 (295)
Q Consensus 192 ~~---~~tk~i~l~--~~n~~~~~~----l~~I~~ia~~~~~~vivD~a~~-~g~~~~--~~~~~~~~~~D~~~~s~~K~ 259 (295)
.. .++.+|++- ..+.|...+ +++|.++|++||+++|+|++|. +|-... .....++ ..|+++ ..|.
T Consensus 212 ~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~~f~~~~~~v-~PDi~~--~gK~ 288 (460)
T PRK06105 212 LAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGNMFGCETFGI-KPDILV--MSKQ 288 (460)
T ss_pred HHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCchhhhHHhcCC-CCCeee--eecc
Confidence 42 246777774 233344444 8999999999999999999983 543321 1111111 267774 4788
Q ss_pred CCCC--ceEEEEEeCCchhh
Q 022564 260 LRGP--RGAMIFFRKGVKEI 277 (295)
Q Consensus 260 l~gp--~gG~l~~~~~~~~~ 277 (295)
++|. +.|++++++++.+.
T Consensus 289 lggG~~P~~av~~~~~i~~~ 308 (460)
T PRK06105 289 LSSSYQPLSAVLMNEKVYDP 308 (460)
T ss_pred cccCcccceEEEEcHHHHHH
Confidence 8664 45778888876554
No 348
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=98.23 E-value=7.4e-05 Score=69.62 Aligned_cols=207 Identities=14% Similarity=0.078 Sum_probs=109.9
Q ss_pred cCceecCCCC-----CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeC-C
Q 022564 47 KGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSL-S 120 (295)
Q Consensus 47 ~~i~L~~~~~-----~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~-s 120 (295)
+.|++..+-. --.|++.+++.+.+.+....+. .+ +...++.+.+.+.+. ..+ .++++ |
T Consensus 54 ~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~-------~~----~~~~~la~~l~~~~p-~~~----~v~f~~s 117 (428)
T PRK12389 54 KYIDYLAAYGPIITGHAHPHITKAITEAAENGVLYGT-------PT----ELEIEFAKMLKEAIP-SLE----KVRFVNS 117 (428)
T ss_pred EEEEccccccccccCCCCHHHHHHHHHHHHhCCccCC-------CC----HHHHHHHHHHHHhCC-CCc----EEEEeCC
Confidence 4455544432 2378999999988865211011 11 122235566666654 223 45554 5
Q ss_pred ChHHHHHHHHhh--cCCCCeEEEecCCCCcccCccccccccc-c-----ccceee----eEEEeeecCCCCCCCCHHHHH
Q 022564 121 GSPSNFQVYTAL--LKPHDRIMALDLPHGGHLSHGYQTDTKK-I-----SAVSIF----FETMPYRLNESTGYIDYDQLE 188 (295)
Q Consensus 121 G~~a~~~~~~al--~~~gd~Vl~~~~~~~~~~~~~~~~~~~~-~-----~~~g~~----~~~v~~~~~~~~~~id~e~l~ 188 (295)
|+.|+.+++... .....+|+...-.|.+............ . ...+.. .....++ -.|+++++
T Consensus 118 GseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~l~ 191 (428)
T PRK12389 118 GTEAVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVP------FNDIEALK 191 (428)
T ss_pred HHHHHHHHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcC------CCCHHHHH
Confidence 555877666543 2345678887766665432111100000 0 000000 0001111 12789999
Q ss_pred HHHhh--cCCcEEEEc--CCCCCCccC----HHHHHHHHHHcCCEEEEEccccccccccC--CCCCCCCcceEEEeCCCC
Q 022564 189 KSATL--FRPKLIVAG--ASAYARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAG--VIPSPFEYADVVTTTTHK 258 (295)
Q Consensus 189 ~~i~~--~~tk~i~l~--~~n~~~~~~----l~~I~~ia~~~~~~vivD~a~~~g~~~~~--~~~~~~~~~D~~~~s~~K 258 (295)
+.++. .++.+|++. ..+.|...+ +++|.++|++||+++|+|++|...-.... ....++ ..|++ +..|
T Consensus 192 ~~l~~~~~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~Rt~~~~a~~~~gv-~PDiv--t~gK 268 (428)
T PRK12389 192 EALDKWGDEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAFRFMYGGAQDLLGV-EPDLT--ALGK 268 (428)
T ss_pred HHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccccccccCcchhhHHhCC-CCCee--eech
Confidence 88863 245667764 333345555 99999999999999999999863211111 111111 26875 4589
Q ss_pred CCCCCc-eEEEEEeCCchhhh
Q 022564 259 SLRGPR-GAMIFFRKGVKEIN 278 (295)
Q Consensus 259 ~l~gp~-gG~l~~~~~~~~~~ 278 (295)
.++|.- -|.+++++++.+..
T Consensus 269 ~lggG~Pi~av~~~~~i~~~~ 289 (428)
T PRK12389 269 IIGGGLPIGAYGGRKDIMEQV 289 (428)
T ss_pred hhcCCCceeEEeEHHHHHhhh
Confidence 886532 25568888876644
No 349
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=98.22 E-value=4.1e-06 Score=66.48 Aligned_cols=60 Identities=12% Similarity=0.078 Sum_probs=50.5
Q ss_pred cCCcchHHHHHHHHHHHHHHHcC----CCCCCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCC
Q 022564 84 YGGNEYIDMAESLCQKRALEAFR----LDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHG 147 (295)
Q Consensus 84 ~~~~~~~~~l~~~~~~~la~~~g----~~~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~ 147 (295)
|....+..++++++.+++.+.+| ++++ +|++|+|++ ++..++.++++|||.|++++|.|+
T Consensus 88 Y~~~~G~~~lR~AiA~~l~~~~g~~v~~~pd----~Ivvt~Ga~~al~~l~~~l~dpGD~VlVp~P~Y~ 152 (153)
T PLN02994 88 FQDYHGLANFRKAIANFMAEARGGRVKFDAD----MIVLSAGATAANEIIMFCIADPGDAFLVPTPYYA 152 (153)
T ss_pred CCCCCCcHHHHHHHHHHHHHHhCCCCccchh----heEEcCCHHHHHHHHHHHHcCCCCEEEEeCCCCC
Confidence 44456678999999999999887 3565 899999999 888899999999999999996554
No 350
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=98.19 E-value=0.00013 Score=68.19 Aligned_cols=204 Identities=17% Similarity=0.109 Sum_probs=103.6
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEe-CCChHHHHHHHHhhc---
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQS-LSGSPSNFQVYTALL--- 133 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~-~sG~~a~~~~~~al~--- 133 (295)
-.|++.+++.+.+.+ ...... ..+ . .+....+.+.+.+++....+ .++| +||+.|+.+++....
T Consensus 66 ~~p~v~~ai~~ql~~-l~~~~~--~~~-~----~~~~~~la~~L~~~~p~~~~----~v~f~~sGseAve~AlklAr~~~ 133 (445)
T PRK09221 66 GRPEIVEAVARQAAT-LDYAPA--FQM-G----HPLAFELAERLAELAPGGLD----HVFFTNSGSESVDTALKIALAYH 133 (445)
T ss_pred CCHHHHHHHHHHHHh-ccCccc--ccc-C----CHHHHHHHHHHHHhCCCCCC----EEEEeCCcHHHHHHHHHHHHHHH
Confidence 478999999888765 211110 001 1 12222355677776643223 4555 455557776655331
Q ss_pred ---C--CCCeEEEecCCCCcccCccccc-----cccc--cccceeeeEEEeeecCCCC--CC--------CCHHHHHHHH
Q 022564 134 ---K--PHDRIMALDLPHGGHLSHGYQT-----DTKK--ISAVSIFFETMPYRLNEST--GY--------IDYDQLEKSA 191 (295)
Q Consensus 134 ---~--~gd~Vl~~~~~~~~~~~~~~~~-----~~~~--~~~~g~~~~~v~~~~~~~~--~~--------id~e~l~~~i 191 (295)
. ...+|+.....|.+...-.... +... ....+ +..++.+.+... +. -..+++++.+
T Consensus 134 ~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i 211 (445)
T PRK09221 134 RARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPG--VDHLPHTLDLPENAFSKGQPEHGAELADDLERLV 211 (445)
T ss_pred HhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCC--CeEeCCCccccccccCCChHHHHHHHHHHHHHHH
Confidence 1 1357888876665542111000 0000 00011 122322210000 00 1245777777
Q ss_pred hh---cCCcEEEEc--CCCCCCccC----HHHHHHHHHHcCCEEEEEcccc-ccccccC--CCCCCCCcceEEEeCCCCC
Q 022564 192 TL---FRPKLIVAG--ASAYARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAG--VIPSPFEYADVVTTTTHKS 259 (295)
Q Consensus 192 ~~---~~tk~i~l~--~~n~~~~~~----l~~I~~ia~~~~~~vivD~a~~-~g~~~~~--~~~~~~~~~D~~~~s~~K~ 259 (295)
+. .++.+|++- .++.|...+ +++|.++|++||+++|+|++|. +|-.... ....++ ..|+++ ..|.
T Consensus 212 ~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~~~~~~gv-~PDi~~--~gK~ 288 (445)
T PRK09221 212 ALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAAFAAERFGV-TPDIIT--FAKG 288 (445)
T ss_pred HhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCchhhHHHhcCC-CCCEEE--eccc
Confidence 53 245677774 333355566 9999999999999999999985 3321111 111111 257664 4677
Q ss_pred CCC--CceEEEEEeCCchhhh
Q 022564 260 LRG--PRGAMIFFRKGVKEIN 278 (295)
Q Consensus 260 l~g--p~gG~l~~~~~~~~~~ 278 (295)
++| .+.|.+++++++.+..
T Consensus 289 l~gG~~Pi~av~~~~~i~~~~ 309 (445)
T PRK09221 289 LTNGAIPMGAVIASDEIYDAF 309 (445)
T ss_pred cccCcccceeeEEcHHHHHhh
Confidence 754 3356677787765543
No 351
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=98.19 E-value=7.8e-05 Score=69.31 Aligned_cols=205 Identities=14% Similarity=0.086 Sum_probs=106.4
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCC-CCCCcceeEEeCCChHHHHHHHHhh--cC
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL-DPEKWGVNVQSLSGSPSNFQVYTAL--LK 134 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~-~~~~~~~~v~~~sG~~a~~~~~~al--~~ 134 (295)
-.|++.+++.+.+.+.....+. .+ .+ +...++.+.+.+++.. ..+. ..+.+||+.|+.+++... ..
T Consensus 57 ~~p~v~~ai~~ql~~~~~~~~~---~~-~~----~~~~~la~~l~~~~p~~~~~~---~~f~~sGseA~e~AlklAr~~t 125 (421)
T PRK06777 57 RHPKVVAAVRQQLDQFTHTAYQ---IV-PY----ASYVTLAERINALAPIDGPAK---TAFFTTGAEAVENAVKIARAYT 125 (421)
T ss_pred CCHHHHHHHHHHHhhccccccc---cc-CC----hHHHHHHHHHHHhCCCCCCce---EEEeCCcHHHHHHHHHHHHHhh
Confidence 4788999999888752110110 00 11 1122244667666543 2221 455567777777655533 23
Q ss_pred CCCeEEEecCCCCcccCccccc------cccc--cccceeeeEEEeeecCCC--CCCCCHHHHHHHHhh----cCCcEEE
Q 022564 135 PHDRIMALDLPHGGHLSHGYQT------DTKK--ISAVSIFFETMPYRLNES--TGYIDYDQLEKSATL----FRPKLIV 200 (295)
Q Consensus 135 ~gd~Vl~~~~~~~~~~~~~~~~------~~~~--~~~~g~~~~~v~~~~~~~--~~~id~e~l~~~i~~----~~tk~i~ 200 (295)
...+|+.....|.+...-...+ ++.. ....+ +..++++.... ....+++.+++.++. .++.+|+
T Consensus 126 gr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~--~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iaavi 203 (421)
T PRK06777 126 GRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGS--IFHALYPNELHGVSVEEALSSVERLFKADIAPDQVAAIL 203 (421)
T ss_pred CCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCC--cEEcCCCccccCcCHHHHHHHHHHHHHhccCCCceEEEE
Confidence 4457888776665553211100 0000 00000 11122221000 001246678877752 2466777
Q ss_pred Ec-CCCC-C----CccCHHHHHHHHHHcCCEEEEEccccccccccCCC-CC-CCC-cceEEEeCCCCCCC-CCceEEEEE
Q 022564 201 AG-ASAY-A----RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI-PS-PFE-YADVVTTTTHKSLR-GPRGAMIFF 270 (295)
Q Consensus 201 l~-~~n~-~----~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~-~~-~~~-~~D~~~~s~~K~l~-gp~gG~l~~ 270 (295)
+. ..+. | ....+++|.++|++||+++|+|++|. |....+.. .. .+. ..|++ +..|.++ |.+.|++++
T Consensus 204 ~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~t-g~gr~g~~~~~~~~~~~pDiv--~~sK~l~~G~pigav~~ 280 (421)
T PRK06777 204 LEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQT-GFARTGKLFAMEYYDVKPDLI--TMAKSLGGGMPISAVVG 280 (421)
T ss_pred ECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-CCccCCchhhhhhcCCCCCEE--eeehhhcCCCceEEEEE
Confidence 74 2222 3 23348899999999999999999986 43222210 00 011 26765 5789885 344588889
Q ss_pred eCCchhhh
Q 022564 271 RKGVKEIN 278 (295)
Q Consensus 271 ~~~~~~~~ 278 (295)
++++.+..
T Consensus 281 ~~~i~~~~ 288 (421)
T PRK06777 281 RAEVMDAP 288 (421)
T ss_pred cHHHHhcc
Confidence 88776543
No 352
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=98.18 E-value=7.9e-05 Score=69.92 Aligned_cols=201 Identities=13% Similarity=0.053 Sum_probs=105.3
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEe-CCChHHHHHHHHhh--cC
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQS-LSGSPSNFQVYTAL--LK 134 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~-~sG~~a~~~~~~al--~~ 134 (295)
-.|++.+++.+.+.+.. +.... +..+ ....++.+.+.+......+ .+++ +||+.|+.+++... ..
T Consensus 70 ~~p~i~~Ai~~ql~~~~---~~~~~-~~~~----~~~~~lae~L~~~~p~~~~----~v~f~~SGsEA~e~AlklAr~~t 137 (457)
T PRK05639 70 SHPKLVKAVQEQVALIQ---HSMIG-YTHS----ERAIRVAEKLAEISPIENP----KVLFGLSGSDAVDMAIKVSKFST 137 (457)
T ss_pred CCHHHHHHHHHHHHhcc---ccccC-ccCC----HHHHHHHHHHHhhCCCCcC----EEEEeCchHHHHHHHHHHHHHhc
Confidence 47899999998876521 11100 1111 1222355677776654333 4555 45555877665543 23
Q ss_pred CCCeEEEecCCCCcccCccccc------cccc--cccceeeeEEEeeecCCC-CCC----CCH--------HHHHHHHh-
Q 022564 135 PHDRIMALDLPHGGHLSHGYQT------DTKK--ISAVSIFFETMPYRLNES-TGY----IDY--------DQLEKSAT- 192 (295)
Q Consensus 135 ~gd~Vl~~~~~~~~~~~~~~~~------~~~~--~~~~g~~~~~v~~~~~~~-~~~----id~--------e~l~~~i~- 192 (295)
...+|+.....|.+.......+ ++.+ ....+ +..+|++.... .+. -|. +.+++.+.
T Consensus 138 gr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~--~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~ 215 (457)
T PRK05639 138 RRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPN--VVWIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVFS 215 (457)
T ss_pred CCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCC--ceEeCCCccccccccccccCCHHHHHHHHHHHHHHHHHH
Confidence 4567887776665532111100 0100 00111 22333321100 000 122 23454442
Q ss_pred ----hcCCcEEEEc--CCCCC----CccCHHHHHHHHHHcCCEEEEEccccccccccCC----CCCCCCcceEEEeCCCC
Q 022564 193 ----LFRPKLIVAG--ASAYA----RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGV----IPSPFEYADVVTTTTHK 258 (295)
Q Consensus 193 ----~~~tk~i~l~--~~n~~----~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~----~~~~~~~~D~~~~s~~K 258 (295)
..++.+|++- ..+.| ...-+++|.++|++||+++|+|++|. |.-..+. ...++ ..|+++ ..|
T Consensus 216 ~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~t-G~GrtG~~~a~~~~gv-~PDiv~--~gK 291 (457)
T PRK05639 216 HVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQT-GIGRTGKWFASEWFEV-KPDLII--FGK 291 (457)
T ss_pred hhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-ccCcCchHHHHHhcCC-CCCEEE--ech
Confidence 2357788874 22222 33348899999999999999999987 4322221 11111 378888 589
Q ss_pred CCCCCce-EEEEEeCCchh
Q 022564 259 SLRGPRG-AMIFFRKGVKE 276 (295)
Q Consensus 259 ~l~gp~g-G~l~~~~~~~~ 276 (295)
.++|.-+ |++++++++.+
T Consensus 292 ~l~gG~pi~av~~~~~i~~ 310 (457)
T PRK05639 292 GVASGMGLSGVIGRKELMD 310 (457)
T ss_pred hhcCCCcceeEEehHHHHh
Confidence 9975455 88889988766
No 353
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=98.17 E-value=6.4e-05 Score=69.93 Aligned_cols=206 Identities=14% Similarity=0.062 Sum_probs=106.8
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEe-CCChHHHHHHHHhhc---
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQS-LSGSPSNFQVYTALL--- 133 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~-~sG~~a~~~~~~al~--- 133 (295)
-.|++.+++.+.+.+... .... .+ . .+...++.+.+.+++..+.+ .+++ .||+.|+.+++....
T Consensus 60 ~~p~i~~Ai~~q~~~~~~-~~~~--~~-~----~~~~~~la~~L~~~~p~~~~----~v~f~~SGsEAve~AlklAr~~~ 127 (428)
T PRK07986 60 NHPQLNAAMKSQIDAMSH-VMFG--GI-T----HPPAIELCRKLVAMTPQPLE----CVFLADSGSVAVEVAMKMALQYW 127 (428)
T ss_pred CCHHHHHHHHHHHhhcCC-cccc--cc-C----CHHHHHHHHHHHhhCCCCcC----EEEEeCCcHHHHHHHHHHHHHHH
Confidence 478999999888765211 0000 00 1 12223355777776653333 4555 456667776555331
Q ss_pred ----CCCCeEEEecCCCCcccCcccccccccc----ccce--eeeEEEeeecCC--CCC-CCCHHHHHHHHhh--cCCcE
Q 022564 134 ----KPHDRIMALDLPHGGHLSHGYQTDTKKI----SAVS--IFFETMPYRLNE--STG-YIDYDQLEKSATL--FRPKL 198 (295)
Q Consensus 134 ----~~gd~Vl~~~~~~~~~~~~~~~~~~~~~----~~~g--~~~~~v~~~~~~--~~~-~id~e~l~~~i~~--~~tk~ 198 (295)
....+|+.....|.+...-......... ...+ .....++.+... +.+ .-|++++++.++. .+..+
T Consensus 128 ~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~~~~~iaa 207 (428)
T PRK07986 128 QAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPFARLMAAHRHEIAA 207 (428)
T ss_pred HhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHHHHHHHHHhCCCcEEE
Confidence 2346788888766553211111000000 0000 001112221110 001 1256788888853 14556
Q ss_pred EEEcC--CCCC-----CccCHHHHHHHHHHcCCEEEEEccccccccccCC----CCCCCCcceEEEeCCCCCCCCC--ce
Q 022564 199 IVAGA--SAYA-----RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGV----IPSPFEYADVVTTTTHKSLRGP--RG 265 (295)
Q Consensus 199 i~l~~--~n~~-----~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~----~~~~~~~~D~~~~s~~K~l~gp--~g 265 (295)
|++-+ ...+ ....+++|.++|++||+++|+|++| .|.-..+. ...++ ..|+++ ..|.++|. +.
T Consensus 208 vi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~-tG~GrtG~~fa~~~~gv-~PDi~t--~gK~l~gG~~p~ 283 (428)
T PRK07986 208 VILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIA-TGFGRTGKLFACEHAGI-APDILC--LGKALTGGTMTL 283 (428)
T ss_pred EEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccc-cCCccCCCeeeecccCC-CCCEEE--echhhhCCcccC
Confidence 66643 3333 2244899999999999999999998 55312211 11111 267775 68988543 33
Q ss_pred EEEEEeCCchhhhc
Q 022564 266 AMIFFRKGVKEINK 279 (295)
Q Consensus 266 G~l~~~~~~~~~~~ 279 (295)
|.+++++++.+...
T Consensus 284 ~av~~~~~i~~~~~ 297 (428)
T PRK07986 284 SATLTTREVAETIS 297 (428)
T ss_pred cchhchHHHHHHhh
Confidence 66778888766543
No 354
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=98.17 E-value=3.7e-05 Score=69.35 Aligned_cols=204 Identities=11% Similarity=0.041 Sum_probs=103.3
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCC-hHHHHHHHHhhc---
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSG-SPSNFQVYTALL--- 133 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG-~~a~~~~~~al~--- 133 (295)
-.|++.+++.+.+.... ..... ....+...++.+.+.+.++-..+ .+.++++ +.|+..++....
T Consensus 33 ~~p~i~~ai~~~~~~~~-~~~~~-------~~~~~~~~~la~~L~~~~p~~~~----~v~f~~sGseAve~Alkla~~~~ 100 (339)
T PF00202_consen 33 NHPEIAEAIAEQANKLN-YVSFS-------GFTHPEAAELAEKLAELFPGGLD----RVFFANSGSEAVEAALKLARQYH 100 (339)
T ss_dssp T-HHHHHHHHHHHHHCS-SCSTT-------TSEEHHHHHHHHHHHHHSSTTEE----EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CccccchhHHHHhhhcc-ccccc-------ceeccchhhhhhhhhhccccccc----eeeeccCchHHHHHHHHHhhccc
Confidence 46889999988876521 11101 11112222355778887743222 5666554 447776555443
Q ss_pred -----CCCCeEEEecCCCCcccCccccc-----ccc--ccccceeeeEEEeeecCCCC---CCCCHHHHHHHH---hhcC
Q 022564 134 -----KPHDRIMALDLPHGGHLSHGYQT-----DTK--KISAVSIFFETMPYRLNEST---GYIDYDQLEKSA---TLFR 195 (295)
Q Consensus 134 -----~~gd~Vl~~~~~~~~~~~~~~~~-----~~~--~~~~~g~~~~~v~~~~~~~~---~~id~e~l~~~i---~~~~ 195 (295)
....+|+.....|.+.......+ ++. .....+ +..+|++.. .. ..-..+++++.+ ...+
T Consensus 101 ~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~--~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 177 (339)
T PF00202_consen 101 NKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPG--VVFVPFPDP-AADEEEQACLNALEELIAALNADE 177 (339)
T ss_dssp HHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTT--EEEEETTCH-HHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred ccccccCCceEEEeeeeeeccCcccccccCCccccccccccccc--cccccCCcc-chhhhHHHHHHHHHHHHHhhcCCc
Confidence 24468888887776543211110 000 011111 222332210 00 000011123222 2335
Q ss_pred CcEEEEcC--CCCC----CccCHHHHHHHHHHcCCEEEEEccccccccccCCC---CCCCCcceEEEeCCCCCCCCCce-
Q 022564 196 PKLIVAGA--SAYA----RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI---PSPFEYADVVTTTTHKSLRGPRG- 265 (295)
Q Consensus 196 tk~i~l~~--~n~~----~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~---~~~~~~~D~~~~s~~K~l~gp~g- 265 (295)
+.++++-+ .+.| ...-+++|.++|++||+++|+|+.+.....-.... ..++ ..|+++++ |.++|.-.
T Consensus 178 iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~~a~~~~gv-~PDiv~~g--K~l~gG~p~ 254 (339)
T PF00202_consen 178 IAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGKFFASEHYGV-DPDIVTFG--KGLGGGLPI 254 (339)
T ss_dssp EEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSSSGHHHHTS-SSSEEEEE--GGGGTTSSE
T ss_pred EEEEEEeccccccCccccccchhhehcccccccccceecccccccccccCCccceecccc-cCcccccc--cchhhhhhc
Confidence 67787742 2222 34448899999999999999999976221111110 0111 27999997 99965544
Q ss_pred EEEEEeCCchhhhc
Q 022564 266 AMIFFRKGVKEINK 279 (295)
Q Consensus 266 G~l~~~~~~~~~~~ 279 (295)
|.+++++++.+...
T Consensus 255 sav~~~~~i~~~~~ 268 (339)
T PF00202_consen 255 SAVLGSEEIMEAFQ 268 (339)
T ss_dssp EEEEEEHHHHTTSC
T ss_pred ccccccchhhcccc
Confidence 88999988776553
No 355
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=98.16 E-value=0.00019 Score=67.47 Aligned_cols=200 Identities=14% Similarity=0.109 Sum_probs=103.9
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhh--cC
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTAL--LK 134 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al--~~ 134 (295)
-.|++.+++.+.+.. +... .. .+. .+...++.+.+++++....+ .++|+++.+ |+.+++... ..
T Consensus 88 ~~p~v~~Ai~~ql~~-~~~~--~~-~~~-----~~~~~~lae~L~~~~p~~~~----~v~f~~sGseAve~AlklAr~~t 154 (459)
T PRK06082 88 GHPHVIEKVKEQMAK-LPFS--PR-RFT-----NETAIECAEKLTEIAGGELN----RVLFAPGGTSAIGMALKLARHIT 154 (459)
T ss_pred CCHHHHHHHHHHHHh-CCCc--cC-ccC-----CHHHHHHHHHHHHhCCCCCC----EEEECCCcHHHHHHHHHHHHHhc
Confidence 478999999988865 2111 11 111 12333456778887754333 566655555 777555433 23
Q ss_pred CCCeEEEecCCCCcccCccccc-----ccc--ccccceeeeEEEeeecCCC-CC-CC------CHHHHHHHHhh-cCCcE
Q 022564 135 PHDRIMALDLPHGGHLSHGYQT-----DTK--KISAVSIFFETMPYRLNES-TG-YI------DYDQLEKSATL-FRPKL 198 (295)
Q Consensus 135 ~gd~Vl~~~~~~~~~~~~~~~~-----~~~--~~~~~g~~~~~v~~~~~~~-~~-~i------d~e~l~~~i~~-~~tk~ 198 (295)
...+|+.....|.+.......+ ++. .....+ +..++.+.... .+ .. +++++++.++. .++.+
T Consensus 155 gr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~vAa 232 (459)
T PRK06082 155 GNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAG--VERIPPAVSYRGAFPDADGSDVHYADYLEYVIEKEGGIGA 232 (459)
T ss_pred CCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCC--CEEeCCCcccccccCChhHHHHHHHHHHHHHHhcCCCEEE
Confidence 4467888776555442111100 000 000111 11222111000 00 01 13557777752 24566
Q ss_pred EEEc-CCCCC-CccC---HHHHHHHHHHcCCEEEEEccccccccccCC----CCCCCCcceEEEeCCCCCCCCC--ceEE
Q 022564 199 IVAG-ASAYA-RLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGV----IPSPFEYADVVTTTTHKSLRGP--RGAM 267 (295)
Q Consensus 199 i~l~-~~n~~-~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~----~~~~~~~~D~~~~s~~K~l~gp--~gG~ 267 (295)
|++- ..+.+ ...| +++|.++|++||+++|.|++|. |.-..+. ...++ ..|+++ ..|.++|. +-|.
T Consensus 233 vIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~t-G~GRtG~~fa~e~~gv-~PDiv~--~gKgl~gG~~P~~a 308 (459)
T PRK06082 233 FIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPN-GMGRTGEWFTHQAYGI-EPDILC--IGKGLGGGLVPIAA 308 (459)
T ss_pred EEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-CCCccchhhHhHhhCC-CCCEEE--ecccccCCCCcceE
Confidence 7764 22223 2333 8999999999999999999986 3211111 11111 378887 68988764 3477
Q ss_pred EEEeCCchh
Q 022564 268 IFFRKGVKE 276 (295)
Q Consensus 268 l~~~~~~~~ 276 (295)
+++++++.+
T Consensus 309 v~~~~~i~~ 317 (459)
T PRK06082 309 MITKDKYNT 317 (459)
T ss_pred EEEcHHHHh
Confidence 777776543
No 356
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=98.15 E-value=0.00012 Score=68.52 Aligned_cols=205 Identities=18% Similarity=0.096 Sum_probs=104.7
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEe-CCChHHHHHHHHhh--cC
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQS-LSGSPSNFQVYTAL--LK 134 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~-~sG~~a~~~~~~al--~~ 134 (295)
-.|++.+++.+.+.+... ....++ . .+...++.+.+.+++.....+ .|+| +||+.|+.+++... ..
T Consensus 59 ~~p~v~~Ai~~ql~~~~~---~~~~~~-~----~~~~~~lae~L~~~~p~~~~~---~v~f~~SGseA~e~AiklAr~~t 127 (445)
T PRK08593 59 APPRVVEAIKAQADKFIH---YTPAYM-Y----HEPLVRLAKKLCELAPGDFEK---RVTFGLSGSDANDGIIKFARAYT 127 (445)
T ss_pred CCHHHHHHHHHHHHhccC---cccccc-C----CHHHHHHHHHHHHhCCCCCCC---EEEECCchHHHHHHHHHHHHHhh
Confidence 479999999988865211 110001 1 122233557777776433111 5666 45555877666543 22
Q ss_pred CCCeEEEecCCCCcccCcccccc------cc--ccccceeeeEEEeeecCCC--CCCCC-------HHHHHHHHhh----
Q 022564 135 PHDRIMALDLPHGGHLSHGYQTD------TK--KISAVSIFFETMPYRLNES--TGYID-------YDQLEKSATL---- 193 (295)
Q Consensus 135 ~gd~Vl~~~~~~~~~~~~~~~~~------~~--~~~~~g~~~~~v~~~~~~~--~~~id-------~e~l~~~i~~---- 193 (295)
...+|+.....|.+.......+. +. .....| +..++++-... ....+ ++++++.+..
T Consensus 128 gr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~--~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (445)
T PRK08593 128 GRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPG--FVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEKYLPA 205 (445)
T ss_pred CCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCC--cEEeCCCccccccccCCcHHHHHHHHHHHHHHHHhhcCC
Confidence 34568877766655421111000 00 000111 22233221100 00011 2445554431
Q ss_pred cCCcEEEEc--CCCCCCccC----HHHHHHHHHHcCCEEEEEcccc-ccccccC--CCCCCCCcceEEEeCCCCCCCC-C
Q 022564 194 FRPKLIVAG--ASAYARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAG--VIPSPFEYADVVTTTTHKSLRG-P 263 (295)
Q Consensus 194 ~~tk~i~l~--~~n~~~~~~----l~~I~~ia~~~~~~vivD~a~~-~g~~~~~--~~~~~~~~~D~~~~s~~K~l~g-p 263 (295)
.++.+|++. ..+.|...+ +++|.++|++||+++|+|++|. +|-.... ....++ ..|++ +..|.+++ .
T Consensus 206 ~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG~~~a~~~~gv-~pDi~--t~gK~l~~G~ 282 (445)
T PRK08593 206 DEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGKWSSISHFNI-TPDLM--SFGKSLAGGM 282 (445)
T ss_pred CceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchHHHHHhcCC-CCCEe--eecccccCCc
Confidence 256777774 222243334 8999999999999999999974 3321110 011111 26766 45888864 4
Q ss_pred ceEEEEEeCCchhhh
Q 022564 264 RGAMIFFRKGVKEIN 278 (295)
Q Consensus 264 ~gG~l~~~~~~~~~~ 278 (295)
+.|++++++++.+..
T Consensus 283 p~gav~~~~~i~~~~ 297 (445)
T PRK08593 283 PMSAIVGRKEIMESL 297 (445)
T ss_pred ccEEEEEcHHHHhhh
Confidence 468888988876543
No 357
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=98.15 E-value=7.8e-05 Score=69.39 Aligned_cols=206 Identities=12% Similarity=0.047 Sum_probs=108.3
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEe-CCChHHHHHHHHhhcC--
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQS-LSGSPSNFQVYTALLK-- 134 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~-~sG~~a~~~~~~al~~-- 134 (295)
-.|++.+++.+.+.+ +...... .+. .... ..+.+.+.++++..-+ .+++ +||+.++..++.....
T Consensus 62 ~~p~v~~ai~~~~~~-~~~~~~~--~~~---~~~~--~~la~~l~~~~~~~~~----~v~f~~sGseA~e~AlklAr~~~ 129 (427)
T TIGR00508 62 NHPRLNAAAQKQIDK-MSHVMFG--GFT---HKPA--IELCQKLVKMTPNALD----CVFLADSGSVAVEVALKMALQYW 129 (427)
T ss_pred CCHHHHHHHHHHHHh-cCCcccc--ccC---CHHH--HHHHHHHHhhCCCCCC----EEEEeCCcHHHHHHHHHHHHHHH
Confidence 478999999988765 2111110 011 1112 2255677777654333 4455 5666677765554321
Q ss_pred -----C-CCeEEEecCCCCcccCcccccccc-c-cc--ccee--eeEEEeeecCCCC--C-CCCHHHHHHHHhhc--CCc
Q 022564 135 -----P-HDRIMALDLPHGGHLSHGYQTDTK-K-IS--AVSI--FFETMPYRLNEST--G-YIDYDQLEKSATLF--RPK 197 (295)
Q Consensus 135 -----~-gd~Vl~~~~~~~~~~~~~~~~~~~-~-~~--~~g~--~~~~v~~~~~~~~--~-~id~e~l~~~i~~~--~tk 197 (295)
+ ..+|+.....|.+.......+-.. . .. ..+. ....++.+...-. + .-|++++++.+... +..
T Consensus 130 ~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~l~~~~~~va 209 (427)
T TIGR00508 130 QAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAPQNRFDEEWNEEAITPLAKLMELHSDEIA 209 (427)
T ss_pred HhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCCCccccchhHHHHHHHHHHHHHhcCCcEE
Confidence 2 367888887776653211111000 0 00 0000 0111221111000 0 12567777777532 456
Q ss_pred EEEEcC--CCCC-----CccCHHHHHHHHHHcCCEEEEEccccccccccCC----CCCCCCcceEEEeCCCCCCCCC--c
Q 022564 198 LIVAGA--SAYA-----RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGV----IPSPFEYADVVTTTTHKSLRGP--R 264 (295)
Q Consensus 198 ~i~l~~--~n~~-----~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~----~~~~~~~~D~~~~s~~K~l~gp--~ 264 (295)
+|++.+ +..+ ...++++|.++|++||+++|+|++| .|.-..+. ....+ ..|+++ ..|.|+|. .
T Consensus 210 avivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~-tG~Gr~G~~~~~~~~~v-~pDi~~--~gK~l~gG~~p 285 (427)
T TIGR00508 210 AVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIA-TGFGRTGKLFACEHAGV-VPDILC--VGKALTGGYMT 285 (427)
T ss_pred EEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccc-cCCCcCCccchhhhcCC-CCCEEE--echhhhcCccc
Confidence 666643 4443 4567999999999999999999998 44322221 01111 378776 58988554 3
Q ss_pred eEEEEEeCCchhhhc
Q 022564 265 GAMIFFRKGVKEINK 279 (295)
Q Consensus 265 gG~l~~~~~~~~~~~ 279 (295)
.+.+++++++.+...
T Consensus 286 ~~a~~~~~~~~~~~~ 300 (427)
T TIGR00508 286 LSATVTTDKVAQTIS 300 (427)
T ss_pred ceEEEEcHHHHHHHh
Confidence 477888878765543
No 358
>PRK07678 aminotransferase; Validated
Probab=98.15 E-value=0.00014 Score=68.13 Aligned_cols=202 Identities=13% Similarity=0.089 Sum_probs=104.9
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEe-CCChHHHHHHHHhh---c
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQS-LSGSPSNFQVYTAL---L 133 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~-~sG~~a~~~~~~al---~ 133 (295)
-.|++.+++.+.+.... +... .+. .+...++.+.+.++++... .++| .||+.|+.+++... .
T Consensus 64 ~~p~v~~ai~~q~~~~~---~~~~-~~~-----~~~~~~lae~l~~~~~~~~-----~v~f~~sGseA~e~AlklAr~~t 129 (451)
T PRK07678 64 GRKELAEAAYEQLKTLS---YFPL-TQS-----HEPAIKLAEKLNEWLGGEY-----VIFFSNSGSEANETAFKIARQYH 129 (451)
T ss_pred CCHHHHHHHHHHHHhcC---cccc-ccC-----CHHHHHHHHHHHHhCCCCC-----EEEEeCCcHHHHHHHHHHHHHHH
Confidence 47899999988876521 1110 011 1222235577777765432 4555 46666777655543 2
Q ss_pred ----CC-CCeEEEecCCCCcccCcccccc-----cc--ccccceeeeEEEeeecCCC-CC-----CCC---HHHHHHHHh
Q 022564 134 ----KP-HDRIMALDLPHGGHLSHGYQTD-----TK--KISAVSIFFETMPYRLNES-TG-----YID---YDQLEKSAT 192 (295)
Q Consensus 134 ----~~-gd~Vl~~~~~~~~~~~~~~~~~-----~~--~~~~~g~~~~~v~~~~~~~-~~-----~id---~e~l~~~i~ 192 (295)
++ ..+|+.....|.+......... +. .....+ +..++.+.... .+ ..| ++++++.++
T Consensus 130 ~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 207 (451)
T PRK07678 130 AQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPG--FLHVPPPDCYRMPGIESEDIYDLECVKEIDRVMT 207 (451)
T ss_pred HhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCC--CEEeCCCccccccccCChHHHHHHHHHHHHHHHH
Confidence 12 3578888766655432111100 00 000111 11222110000 00 011 233566664
Q ss_pred ---hcCCcEEEEc--CCCCCC----ccCHHHHHHHHHHcCCEEEEEcccc-ccccc--cCCCCCCCCcceEEEeCCCCCC
Q 022564 193 ---LFRPKLIVAG--ASAYAR----LYDYERIRKVCNKQKAIMLADMAHI-SGLVA--AGVIPSPFEYADVVTTTTHKSL 260 (295)
Q Consensus 193 ---~~~tk~i~l~--~~n~~~----~~~l~~I~~ia~~~~~~vivD~a~~-~g~~~--~~~~~~~~~~~D~~~~s~~K~l 260 (295)
..++.+|++. ..+.|. ..-++++.++|++||+++|.|+.+. +|-.. ...+..++ ..|++++ .|.+
T Consensus 208 ~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~gv-~PDivt~--gK~l 284 (451)
T PRK07678 208 WELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGKAFGFMNYGV-KPDIITM--AKGI 284 (451)
T ss_pred hcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCchhHHHHhcCC-CCCEEEe--eccc
Confidence 2257788874 222232 2338899999999999999999984 44321 11111111 2788866 7988
Q ss_pred CCC--ceEEEEEeCCchhhh
Q 022564 261 RGP--RGAMIFFRKGVKEIN 278 (295)
Q Consensus 261 ~gp--~gG~l~~~~~~~~~~ 278 (295)
+|. +-|.+.+++++.+..
T Consensus 285 ggG~~Pi~av~~~~~i~~~~ 304 (451)
T PRK07678 285 TSAYLPLSATAVKKEIYEAF 304 (451)
T ss_pred ccCCcceeEEEEcHHHHHHH
Confidence 754 347788888876543
No 359
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=98.13 E-value=0.0001 Score=68.47 Aligned_cols=204 Identities=13% Similarity=0.038 Sum_probs=104.2
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCC-CCCCcceeEEeCCChHHHHHHHHhh--cC
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL-DPEKWGVNVQSLSGSPSNFQVYTAL--LK 134 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~-~~~~~~~~v~~~sG~~a~~~~~~al--~~ 134 (295)
-.|++.+++.+.+.+....+.. .+ . .+...++.+.+.++... ..+. -.+.+||+.|+.+++... ..
T Consensus 50 ~~p~v~~a~~~ql~~~~~~~~~---~~-~----~~~~~~la~~l~~~~p~~~~~~---v~f~~sGseA~e~AlklAr~~t 118 (420)
T TIGR00700 50 SHPRVVDAVRTQVAEFTHTCFM---VT-P----YEGYVALAEKLNRIAPGSGPKK---SVFFNSGAEAVENAVKIARSYT 118 (420)
T ss_pred CCHHHHHHHHHHHHhccCcccc---cc-C----ChHHHHHHHHHHHhCCCCCCCE---EEEeCCcHHHHHHHHHHHHHhc
Confidence 4789999999888652111110 00 1 11122244666666532 2221 344556666777655533 23
Q ss_pred CCCeEEEecCCCCcccCccccc------cccccc--cceeeeEEEeeecCCCC--------CCCCHHHHHHHHh----hc
Q 022564 135 PHDRIMALDLPHGGHLSHGYQT------DTKKIS--AVSIFFETMPYRLNEST--------GYIDYDQLEKSAT----LF 194 (295)
Q Consensus 135 ~gd~Vl~~~~~~~~~~~~~~~~------~~~~~~--~~g~~~~~v~~~~~~~~--------~~id~e~l~~~i~----~~ 194 (295)
...+|+.....|.+.......+ +..+.. ..+ +..++++..... ..-+++.+++.+. ..
T Consensus 119 gr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (420)
T TIGR00700 119 GRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPE--VYRAPLPYPYRDGLLDKQLSTDGELAAARAIFVIDVGAN 196 (420)
T ss_pred CCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCC--cEEeCCCccccccccccchhHHHHHHHHHHHHHhhcCCC
Confidence 4457887776665542111110 010000 011 122332210000 0112556776653 12
Q ss_pred CCcEEEEc--CCCCCC----ccCHHHHHHHHHHcCCEEEEEccccccccccC-C---CCCCCCcceEEEeCCCCCCC-CC
Q 022564 195 RPKLIVAG--ASAYAR----LYDYERIRKVCNKQKAIMLADMAHISGLVAAG-V---IPSPFEYADVVTTTTHKSLR-GP 263 (295)
Q Consensus 195 ~tk~i~l~--~~n~~~----~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~-~---~~~~~~~~D~~~~s~~K~l~-gp 263 (295)
++.+|++- ..+.|. ...+++|.++|++||+++|+|+++. |....+ . ...+ ...|+++ +.|.++ |.
T Consensus 197 ~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~t-g~gr~g~~~a~~~~~-~~pDi~~--lsK~l~~G~ 272 (420)
T TIGR00700 197 NVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQT-GFARTGAMFACEHEG-PEPDLIT--TAKSLADGL 272 (420)
T ss_pred cEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEeccc-CCcccchhHHHhhcC-CCCCEEE--eeccccCCc
Confidence 56777774 222232 2238999999999999999999975 221121 1 1111 0267655 789885 34
Q ss_pred ceEEEEEeCCchhhh
Q 022564 264 RGAMIFFRKGVKEIN 278 (295)
Q Consensus 264 ~gG~l~~~~~~~~~~ 278 (295)
+-|++++++++.+..
T Consensus 273 pig~v~~~~~i~~~~ 287 (420)
T TIGR00700 273 PLSGVTGRAEIMDAP 287 (420)
T ss_pred ceEEEEecHHHHhhc
Confidence 448899988876543
No 360
>PRK06149 hypothetical protein; Provisional
Probab=98.10 E-value=0.00024 Score=72.68 Aligned_cols=205 Identities=9% Similarity=0.009 Sum_probs=105.0
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhh--cCC
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTAL--LKP 135 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al--~~~ 135 (295)
-.|++.+++.+.+.... .. .++ .+ ....++.+.+++++....+ ...+++||+.|+.+++... ...
T Consensus 600 ~hp~v~~Ai~~q~~~l~---~~-~~~--~~----~~~~elae~L~~~~p~~~~---~v~f~~SGsEA~e~AlklAr~~tg 666 (972)
T PRK06149 600 GHPRLAAAAARQWSLLN---TN-SRF--HY----AAVAEFSERLAALAPDGLD---TVFLVNSGSEANDLAIRLAWAASG 666 (972)
T ss_pred CCHHHHHHHHHHHHhcc---cc-ccc--cC----HHHHHHHHHHHHhCCCCcC---EEEEeCCchHHHHHHHHHHHHhcC
Confidence 47999999988776521 11 111 11 2223355777777632222 1455567777888766622 233
Q ss_pred CCeEEEecCCCCcccCccccc--c---cccc--ccceeeeEEEeeecC-CCCCC-CC-----HHHHHHHHh-----hcCC
Q 022564 136 HDRIMALDLPHGGHLSHGYQT--D---TKKI--SAVSIFFETMPYRLN-ESTGY-ID-----YDQLEKSAT-----LFRP 196 (295)
Q Consensus 136 gd~Vl~~~~~~~~~~~~~~~~--~---~~~~--~~~g~~~~~v~~~~~-~~~~~-id-----~e~l~~~i~-----~~~t 196 (295)
..+|+..+..|.+........ . .... ...+ .+..++.+-. ...+. .| .+++++.++ ..++
T Consensus 667 r~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~-~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i 745 (972)
T PRK06149 667 RRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPD-WVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDASGRGL 745 (972)
T ss_pred CCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCC-CeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHHHhhcCCce
Confidence 456777776565432111000 0 0000 0000 0111221100 00010 11 234444432 1245
Q ss_pred cEEEEc--CCCCCCccC----HHHHHHHHHHcCCEEEEEccc-ccccccc---CCCCCCCCcceEEEeCCCCCCCCCce-
Q 022564 197 KLIVAG--ASAYARLYD----YERIRKVCNKQKAIMLADMAH-ISGLVAA---GVIPSPFEYADVVTTTTHKSLRGPRG- 265 (295)
Q Consensus 197 k~i~l~--~~n~~~~~~----l~~I~~ia~~~~~~vivD~a~-~~g~~~~---~~~~~~~~~~D~~~~s~~K~l~gp~g- 265 (295)
.+|++- ..+.|...+ +++|.++|++||+++|+|++| ++|-... .....++ ..|+++ ..|.+++...
T Consensus 746 AavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv-~PDivt--~gK~lg~G~Pl 822 (972)
T PRK06149 746 AGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGV-VPDIIT--MAKGMGNGHPL 822 (972)
T ss_pred EEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCccchhhhhcCC-CCCEEE--ecccccCCeee
Confidence 667663 334455555 999999999999999999998 3443321 1111111 378874 4898875433
Q ss_pred EEEEEeCCchhhhc
Q 022564 266 AMIFFRKGVKEINK 279 (295)
Q Consensus 266 G~l~~~~~~~~~~~ 279 (295)
|++++++++.+...
T Consensus 823 ~av~~~~~i~~~~~ 836 (972)
T PRK06149 823 GAVITRREIAEALE 836 (972)
T ss_pred EEEEEcHHHHhhhc
Confidence 88888888766543
No 361
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.09 E-value=9.9e-05 Score=68.58 Aligned_cols=205 Identities=15% Similarity=0.093 Sum_probs=105.5
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhc----
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALL---- 133 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~---- 133 (295)
-.|++.+++.+.+.+.. ...... + . .+...++.+.+.+......+. -.+.+||+.|+.+++....
T Consensus 57 ~~p~i~~ai~~q~~~~~-~~~~~~--~-~----~~~~~~lae~L~~~~p~~~~~---v~f~~SGseA~e~AlklAr~~~~ 125 (422)
T PRK05630 57 GHPRLKAAAHKQIDTMS-HVMFGG--L-T----HEPAIKLTRKLLNLTDNGLDH---VFYSDSGSVSVEVAIKMALQYSK 125 (422)
T ss_pred CCHHHHHHHHHHHHhCC-CcccCC--c-C----CHHHHHHHHHHHhhCCCCcCE---EEEeCCcHHHHHHHHHHHHHHHH
Confidence 47899999998886521 110000 0 1 122223556777765432331 3444566667776555331
Q ss_pred ---CC-CCeEEEecCCCCcccCccccccc-cc-c-c-cce--eeeEEEeeecCCCCCCCC----HHHHHHHHhhcCCcEE
Q 022564 134 ---KP-HDRIMALDLPHGGHLSHGYQTDT-KK-I-S-AVS--IFFETMPYRLNESTGYID----YDQLEKSATLFRPKLI 199 (295)
Q Consensus 134 ---~~-gd~Vl~~~~~~~~~~~~~~~~~~-~~-~-~-~~g--~~~~~v~~~~~~~~~~id----~e~l~~~i~~~~tk~i 199 (295)
.+ ..+|+.....|.+.......... .. . . ... .....+|.+.......-| .+.+++.+.+ ++.+|
T Consensus 126 ~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~iAAv 204 (422)
T PRK05630 126 GQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPVRGSSPQEISEYLRSLELLIDE-TVAAI 204 (422)
T ss_pred hcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCcccCCChHHHHHHHHHHHHHHhh-ceEEE
Confidence 12 35788887766553211111100 00 0 0 000 001122222100000001 2445555554 78888
Q ss_pred EEcC--CCC-----CCccCHHHHHHHHHHcCCEEEEEccccccccccCC----CCCCCCcceEEEeCCCCCCCC--CceE
Q 022564 200 VAGA--SAY-----ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGV----IPSPFEYADVVTTTTHKSLRG--PRGA 266 (295)
Q Consensus 200 ~l~~--~n~-----~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~----~~~~~~~~D~~~~s~~K~l~g--p~gG 266 (295)
++.+ ... +....+++|.++|++||+++|+|++|. |.-..+. ...+. ..|++ +..|.++| ++.|
T Consensus 205 i~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~t-G~GrtG~~~a~~~~gv-~PDi~--t~gK~l~gG~~p~~ 280 (422)
T PRK05630 205 IIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIAT-GFGRTGELFATLAAGV-TPDIM--CVGKALTGGFMSFA 280 (422)
T ss_pred EEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccee-CCCcCchhhHHHhcCC-CCCee--eeechhhcCccccc
Confidence 8754 222 244568899999999999999999984 3322111 11110 26777 55899955 5678
Q ss_pred EEEEeCCchhhh
Q 022564 267 MIFFRKGVKEIN 278 (295)
Q Consensus 267 ~l~~~~~~~~~~ 278 (295)
++++++++.+..
T Consensus 281 av~~~~~i~~~~ 292 (422)
T PRK05630 281 ATLCTDKVAQLI 292 (422)
T ss_pred eeeccHHHHHHH
Confidence 888998876653
No 362
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=98.07 E-value=0.00011 Score=68.50 Aligned_cols=91 Identities=14% Similarity=0.111 Sum_probs=60.6
Q ss_pred CHHHHHHHHhhc--CCcEEEEc--CCCCCCccCHHHHHHHHHHcCCEEEEEccccccccccC--CCC-CCCCcceEEEeC
Q 022564 183 DYDQLEKSATLF--RPKLIVAG--ASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAG--VIP-SPFEYADVVTTT 255 (295)
Q Consensus 183 d~e~l~~~i~~~--~tk~i~l~--~~n~~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~--~~~-~~~~~~D~~~~s 255 (295)
|+++++++++.. ++.+|++- .+..+....+++|.++|++||+++|+|++| .|..... ... .++ ..|++ +
T Consensus 173 d~~~l~~~l~~~~~~~aavi~Epv~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~-tG~~~~~~g~~~~~gv-~PDi~--t 248 (431)
T PRK06209 173 DIASLEALFEDHPGRIACVILEPATADEPQDGFLHEVRRLCHENGALFILDEMI-TGFRWHMRGAQKLYGI-VPDLS--C 248 (431)
T ss_pred CHHHHHHHHHhCCCCEEEEEEccccCCCCCHHHHHHHHHHHHHcCCEEEEEccc-ccCCcCcchhhHHhCC-Cccee--e
Confidence 789999988632 35566663 222345566999999999999999999998 5543221 111 111 26764 4
Q ss_pred CCCCCCC-CceEEEEEeCCchhh
Q 022564 256 THKSLRG-PRGAMIFFRKGVKEI 277 (295)
Q Consensus 256 ~~K~l~g-p~gG~l~~~~~~~~~ 277 (295)
..|.++| -++|++++++++.+.
T Consensus 249 ~gK~lggG~p~~av~~~~~i~~~ 271 (431)
T PRK06209 249 FGKALGNGFAVSALAGKREYMEL 271 (431)
T ss_pred ehhhhcCCcccEEEEEHHHHHhh
Confidence 5898875 345888888877654
No 363
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.06 E-value=0.00029 Score=66.12 Aligned_cols=204 Identities=7% Similarity=0.011 Sum_probs=108.0
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeC-CChHHHHHHHHhhc---
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSL-SGSPSNFQVYTALL--- 133 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~-sG~~a~~~~~~al~--- 133 (295)
-.|++.+++.+.+.+.. ..... .+. .+...++.+.+.+.++..-+ .++|+ ||+.|+.+++....
T Consensus 71 ~~p~v~~Ai~~ql~~~~-~~~~~--~~~-----~~~~~~lAe~L~~~~p~~~~----~v~f~~sGseAve~AlKlA~~~~ 138 (453)
T PRK06943 71 ANPRINAALKDQLDTLE-HAMLA--GCT-----HEPAIELAERLAALTGGTLG----HAFFASDGASAVEIALKMSFHAW 138 (453)
T ss_pred CCHHHHHHHHHHHHhcC-Ccccc--ccC-----CHHHHHHHHHHHHhCCCCCC----EEEEeCCCHHHHHHHHHHHHHHH
Confidence 47899999998886521 11110 011 12222355777777654323 45555 56658776665441
Q ss_pred -----CCCCeEEEecCCCCcccCccccc-----ccc--ccccceeeeEEEeeecCCCC--C-------CCCHHHHHHHHh
Q 022564 134 -----KPHDRIMALDLPHGGHLSHGYQT-----DTK--KISAVSIFFETMPYRLNEST--G-------YIDYDQLEKSAT 192 (295)
Q Consensus 134 -----~~gd~Vl~~~~~~~~~~~~~~~~-----~~~--~~~~~g~~~~~v~~~~~~~~--~-------~id~e~l~~~i~ 192 (295)
....+|+.....|.+...-...+ ++. .....+ +..++.+..... . .-+++++++.++
T Consensus 139 ~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~--~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~ 216 (453)
T PRK06943 139 RNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRH--AHVVASPDARGARPGETAADVAARALADVRRLFA 216 (453)
T ss_pred HHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCC--CEEECCCCccccccCCCHHHHHHHHHHHHHHHHH
Confidence 12467888887776643111100 000 000011 112322210000 0 013577777775
Q ss_pred h--cCCcEEEEcC--CCC-C----CccCHHHHHHHHHHcCCEEEEEcccc-cccccc--CCCCCCCCcceEEEeCCCCCC
Q 022564 193 L--FRPKLIVAGA--SAY-A----RLYDYERIRKVCNKQKAIMLADMAHI-SGLVAA--GVIPSPFEYADVVTTTTHKSL 260 (295)
Q Consensus 193 ~--~~tk~i~l~~--~n~-~----~~~~l~~I~~ia~~~~~~vivD~a~~-~g~~~~--~~~~~~~~~~D~~~~s~~K~l 260 (295)
. .++.+|++-+ ... | ...-++++.++|++||+++|.|+.+. +|-... .....++ ..|++++ .|.+
T Consensus 217 ~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG~~fa~~~~gv-~PDivt~--gKgl 293 (453)
T PRK06943 217 ERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTGTFFACEQAGV-WPDFLCL--SKGI 293 (453)
T ss_pred hCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCcchhHHHhCCC-CCCeEee--ehhh
Confidence 2 2567777753 232 2 33348899999999999999999974 332211 0111111 2788887 7888
Q ss_pred CCC--ceEEEEEeCCchhhh
Q 022564 261 RGP--RGAMIFFRKGVKEIN 278 (295)
Q Consensus 261 ~gp--~gG~l~~~~~~~~~~ 278 (295)
+|. +-|.+++++++.+..
T Consensus 294 ~gG~~Pi~av~~~~ei~~~~ 313 (453)
T PRK06943 294 SGGYLPLSLVLSRDAIFAAF 313 (453)
T ss_pred ccCcccceEEEEcHHHHHhh
Confidence 654 347788888876543
No 364
>PRK05965 hypothetical protein; Provisional
Probab=98.04 E-value=0.00025 Score=66.69 Aligned_cols=205 Identities=13% Similarity=0.057 Sum_probs=105.8
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeC-CChHHHHHHHHhh---c
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSL-SGSPSNFQVYTAL---L 133 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~-sG~~a~~~~~~al---~ 133 (295)
-.|++.+++.+.+.+.. +.... +. ...+....+.+.+.+++..+.+ .++|+ ||+.|+.+++... .
T Consensus 63 ~~p~i~~Ai~~q~~~~~---~~~~~-~~---~~~~~~~~lae~L~~~~p~~~~----~v~f~~sGSEAve~AlKlAr~~~ 131 (459)
T PRK05965 63 GQESIVEAAAEQMRELP---YATGY-FH---FGSEPAIRLAAKLAERAPGSLN----HVYFTLGGSDAVDSAVRFIRHYW 131 (459)
T ss_pred CCHHHHHHHHHHHHhcC---Ccccc-cc---cCCHHHHHHHHHHHhhCCCCcC----EEEEeCChhHHHHHHHHHHHHHH
Confidence 37899999999887521 10000 00 0112222355677666543333 56665 5666777665532 1
Q ss_pred ---C-C-CCeEEEecCCCCcccCcccc-----cccc--ccccceeeeEEEeeecCC-CCCCCC--------HHHHHHHHh
Q 022564 134 ---K-P-HDRIMALDLPHGGHLSHGYQ-----TDTK--KISAVSIFFETMPYRLNE-STGYID--------YDQLEKSAT 192 (295)
Q Consensus 134 ---~-~-gd~Vl~~~~~~~~~~~~~~~-----~~~~--~~~~~g~~~~~v~~~~~~-~~~~id--------~e~l~~~i~ 192 (295)
. + ..+|+.....|.+....... .+.. +....+ ...++.+... ....-| ++++++.+.
T Consensus 132 ~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~ 209 (459)
T PRK05965 132 NATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPW--QHKIPSPYPYRNPVGDDPQAIIAASVAALRAKVA 209 (459)
T ss_pred HhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCC--CEEcCCCcccccccCCChHHHHHHHHHHHHHHHH
Confidence 1 2 35788888776655311000 0010 000111 1122222110 001113 356777775
Q ss_pred h---cCCcEEEEc-CCCC-C----CccCHHHHHHHHHHcCCEEEEEcccc-ccccc--cCCCCCCCCcceEEEeCCCCCC
Q 022564 193 L---FRPKLIVAG-ASAY-A----RLYDYERIRKVCNKQKAIMLADMAHI-SGLVA--AGVIPSPFEYADVVTTTTHKSL 260 (295)
Q Consensus 193 ~---~~tk~i~l~-~~n~-~----~~~~l~~I~~ia~~~~~~vivD~a~~-~g~~~--~~~~~~~~~~~D~~~~s~~K~l 260 (295)
. .++.+|++. .... | ...-+++|.++|++||+++|.|+.+. +|-.. ......++ ..|++++ .|.+
T Consensus 210 ~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~--gKgl 286 (459)
T PRK05965 210 ELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGPLFACEAEGV-VPDLMTV--AKGL 286 (459)
T ss_pred hcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCchhhhHhhcCC-CCCeEEe--chhh
Confidence 3 256777774 2222 2 33348899999999999999999975 22221 11111111 2788877 6888
Q ss_pred CCC--ceEEEEEeCCchhhh
Q 022564 261 RGP--RGAMIFFRKGVKEIN 278 (295)
Q Consensus 261 ~gp--~gG~l~~~~~~~~~~ 278 (295)
+|. +-|.+++++++.+..
T Consensus 287 ~gG~~Pi~av~~~~~i~~~~ 306 (459)
T PRK05965 287 TSGYVPMGAVLMSDHVYQGI 306 (459)
T ss_pred ccCCcceeEEEEcHHHHHHH
Confidence 654 237777888875543
No 365
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=98.04 E-value=0.00021 Score=66.89 Aligned_cols=199 Identities=11% Similarity=0.045 Sum_probs=100.8
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCC-CCCcceeEEe-CCChHHHHHHHHhh--c
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLD-PEKWGVNVQS-LSGSPSNFQVYTAL--L 133 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~-~~~~~~~v~~-~sG~~a~~~~~~al--~ 133 (295)
-.|++.+++.+.+.+.... ...++ ..+...++.+.+.+++... ... ..+++ +||+.|+.+++... .
T Consensus 56 ~~p~i~~ai~~q~~~~~~~---~~~~~-----~~~~~~~lae~L~~~~p~~~~~~--~~~f~~~sGsEA~e~AlklAr~~ 125 (442)
T TIGR00709 56 NHPNMKQKILDYLQSGLPL---HTLDL-----TTPLKDAFIEALLNIIPKRKMDY--KLQFPGPSGADAVEAAIKLAKTY 125 (442)
T ss_pred CCHHHHHHHHHHHHhccCc---ccccc-----CcHHHHHHHHHHHHhCCCcCCCc--cEEEeCCCHHHHHHHHHHHHHHh
Confidence 4789999999887652100 00001 1123333557777776432 111 03454 57777777665543 2
Q ss_pred CCCCeEEEecCCCCcccCcccccc-----ccc--cccceeeeEEEeeecCCCCCCC--------CH----HHHHHHHhh-
Q 022564 134 KPHDRIMALDLPHGGHLSHGYQTD-----TKK--ISAVSIFFETMPYRLNESTGYI--------DY----DQLEKSATL- 193 (295)
Q Consensus 134 ~~gd~Vl~~~~~~~~~~~~~~~~~-----~~~--~~~~g~~~~~v~~~~~~~~~~i--------d~----e~l~~~i~~- 193 (295)
....+|+...-.|.+......... +.+ ....+ +..++++. .... +. +.+++.+..
T Consensus 126 tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (442)
T TIGR00709 126 TGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPG--VQFMPYPH---EYRCPFGIGGEAGSNASIEYFENFIEDV 200 (442)
T ss_pred cCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCC--cEEeCCCc---cccccccCCchhHHHHHHHHHHHHHHhh
Confidence 344678888766655532111110 000 00111 22222221 1111 11 223444421
Q ss_pred ----cCCcEEEEc-CCCC-C----CccCHHHHHHHHHHcCCEEEEEcccc-cccccc--CCCCCCCCcceEEEeCCCCCC
Q 022564 194 ----FRPKLIVAG-ASAY-A----RLYDYERIRKVCNKQKAIMLADMAHI-SGLVAA--GVIPSPFEYADVVTTTTHKSL 260 (295)
Q Consensus 194 ----~~tk~i~l~-~~n~-~----~~~~l~~I~~ia~~~~~~vivD~a~~-~g~~~~--~~~~~~~~~~D~~~~s~~K~l 260 (295)
.++.++++. ..++ | ...-+++|.++|++||+++|.|+.+. +|-... .....+. ..|+++ ..|.+
T Consensus 201 ~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~--~gK~l 277 (442)
T TIGR00709 201 ESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSGTMFAFEHAGI-EPDFVV--MSKAV 277 (442)
T ss_pred ccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHHcCC-CCcEEE--Ecccc
Confidence 256677774 3333 2 33358899999999999999999975 222110 0111111 278888 58988
Q ss_pred CCC-ceEEEEEeCCc
Q 022564 261 RGP-RGAMIFFRKGV 274 (295)
Q Consensus 261 ~gp-~gG~l~~~~~~ 274 (295)
++. +-|++++++++
T Consensus 278 ~~G~Pigav~~~~~~ 292 (442)
T TIGR00709 278 GGGLPLAVLLIAPEF 292 (442)
T ss_pred cCCcccEEEEEchHH
Confidence 642 33777777765
No 366
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.01 E-value=0.00017 Score=67.14 Aligned_cols=203 Identities=10% Similarity=0.030 Sum_probs=105.5
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEe-CCChHHHHHHHHhhc---
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQS-LSGSPSNFQVYTALL--- 133 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~-~sG~~a~~~~~~al~--- 133 (295)
-.|++.+++.+.+.+.. +.....+. .+....+.+.+.+.+....+ .++| .||+.|+.+++....
T Consensus 61 ~~p~v~~ai~~q~~~~~---~~~~~~~~-----~~~~~~lae~L~~~~p~~~~----~v~f~~sGseAve~AlklAr~~~ 128 (429)
T PRK06173 61 NHPRLNAAATNQLAKMS---HIMFGGFT-----HEPAVELAQKLLEILPPSLN----KIFFADSGSVAVEVAMKMALQYQ 128 (429)
T ss_pred CCHHHHHHHHHHHHhcC---CccccccC-----CHHHHHHHHHHHhhCCCCcC----EEEEeCCchHHHHHHHHHHHHHH
Confidence 46899999988876521 00000011 12222355666666543223 4555 555557776555432
Q ss_pred ----CC-CCeEEEecCCCCcccCccccc------ccccc--ccceeeeEEEeeecCC--CCC-CCCHHHHHHHHhh--cC
Q 022564 134 ----KP-HDRIMALDLPHGGHLSHGYQT------DTKKI--SAVSIFFETMPYRLNE--STG-YIDYDQLEKSATL--FR 195 (295)
Q Consensus 134 ----~~-gd~Vl~~~~~~~~~~~~~~~~------~~~~~--~~~g~~~~~v~~~~~~--~~~-~id~e~l~~~i~~--~~ 195 (295)
++ ..+|+.....|.+.......+ ++... ...+ ...+|.+... ..+ .-+++++++.+.. .+
T Consensus 129 ~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~--~~~~~~p~~~~~~~~~~~~l~~l~~~i~~~~~~ 206 (429)
T PRK06173 129 QAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPV--QYFLPQPSIKFGEEWNDEAIEPLQDLLEQKGDE 206 (429)
T ss_pred HHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCC--CeEeCCCCcccchhHHHHHHHHHHHHHHhCCCc
Confidence 12 357888877665532111100 00000 0001 1123222110 000 1146667777752 25
Q ss_pred CcEEEEcC--CCCC-----CccCHHHHHHHHHHcCCEEEEEccccccccccCC----CCCCCCcceEEEeCCCCCCCCC-
Q 022564 196 PKLIVAGA--SAYA-----RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGV----IPSPFEYADVVTTTTHKSLRGP- 263 (295)
Q Consensus 196 tk~i~l~~--~n~~-----~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~----~~~~~~~~D~~~~s~~K~l~gp- 263 (295)
+.+|++.+ ...+ ...-+++|.++|++||+++|+|++| .|.-..+. ...++ ..|+++ +.|.++|.
T Consensus 207 iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~-tG~GrtG~~~a~~~~gv-~PDiv~--~gK~l~gG~ 282 (429)
T PRK06173 207 IAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIA-TGFGRTGKLFALEHAGV-VPDIMC--IGKALTGGY 282 (429)
T ss_pred EEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchh-cCCCcCCcchHHHhcCC-CCCEEE--eehhhhCCc
Confidence 67777754 2332 3344889999999999999999999 55322221 11111 278887 68988543
Q ss_pred -ceEEEEEeCCchhhh
Q 022564 264 -RGAMIFFRKGVKEIN 278 (295)
Q Consensus 264 -~gG~l~~~~~~~~~~ 278 (295)
+.+.+++++++.+..
T Consensus 283 ~p~~a~~~~~~i~~~~ 298 (429)
T PRK06173 283 LTLSATITTEAIAQTI 298 (429)
T ss_pred cccceEEecHHHHHHH
Confidence 347777787765543
No 367
>PRK07482 hypothetical protein; Provisional
Probab=98.00 E-value=0.00032 Score=65.93 Aligned_cols=204 Identities=15% Similarity=0.003 Sum_probs=104.2
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEe-CCChHHHHHHHHhhc---
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQS-LSGSPSNFQVYTALL--- 133 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~-~sG~~a~~~~~~al~--- 133 (295)
-.|++.+++.+.+.+.. ..... ..+. .+...++.+.+.+.+..+.+ .++| +||+.|+.+++....
T Consensus 67 ~~p~v~~Av~~q~~~~~-~~~~~-~~~~-----~~~~~~lAe~L~~~~p~~~~----~v~f~~sGSEAve~AlKlAr~~~ 135 (461)
T PRK07482 67 GRTEVAEAIAEQAKELA-YYHTY-VGHG-----TEASITLSKRIIDRAPAGMS----KVYYGLSGSDANETQIKLVWYYN 135 (461)
T ss_pred CCHHHHHHHHHHHHhcC-ccccc-cccC-----CHHHHHHHHHHHHhCCCCcC----EEEEeCchHHHHHHHHHHHHHHH
Confidence 47899999999887621 00000 0011 12223355677776643333 4555 566667776655431
Q ss_pred ---C--CCCeEEEecCCCCcccCccccc-----ccc--ccccceeeeEEEeeecCCC----CC------CCCHHHHHHHH
Q 022564 134 ---K--PHDRIMALDLPHGGHLSHGYQT-----DTK--KISAVSIFFETMPYRLNES----TG------YIDYDQLEKSA 191 (295)
Q Consensus 134 ---~--~gd~Vl~~~~~~~~~~~~~~~~-----~~~--~~~~~g~~~~~v~~~~~~~----~~------~id~e~l~~~i 191 (295)
. ...+|+.....|.+...-...+ ++. +....+ +..++.+.... +. .-+++++++.+
T Consensus 136 ~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~--~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~ 213 (461)
T PRK07482 136 NVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIAR--VLHTEAPHYYRRADAGMSEEQFSAYCADELEELI 213 (461)
T ss_pred HhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCC--CEEcCCCccccccccCCCHHHHHHHHHHHHHHHH
Confidence 1 2357888876666542100000 000 000111 11122111000 00 11467788877
Q ss_pred hh---cCCcEEEEc-CCCC-C----CccCHHHHHHHHHHcCCEEEEEcccc-cccccc--CCCCCCCCcceEEEeCCCCC
Q 022564 192 TL---FRPKLIVAG-ASAY-A----RLYDYERIRKVCNKQKAIMLADMAHI-SGLVAA--GVIPSPFEYADVVTTTTHKS 259 (295)
Q Consensus 192 ~~---~~tk~i~l~-~~n~-~----~~~~l~~I~~ia~~~~~~vivD~a~~-~g~~~~--~~~~~~~~~~D~~~~s~~K~ 259 (295)
.. .++.+|++- .... | ...-+++|.++|++||+++|.|+.+. +|-... .....++ ..|++++ .|.
T Consensus 214 ~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~--gKg 290 (461)
T PRK07482 214 LAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLGSMFGSDHYGI-EPDLITV--AKG 290 (461)
T ss_pred HhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCcchhhHHhcCC-CCCEEEE--ccc
Confidence 42 256777774 2222 2 33348899999999999999999975 222111 1111111 2788886 798
Q ss_pred CCCC--ceEEEEEeCCchhh
Q 022564 260 LRGP--RGAMIFFRKGVKEI 277 (295)
Q Consensus 260 l~gp--~gG~l~~~~~~~~~ 277 (295)
++|. +-|.+++++++.+.
T Consensus 291 l~gG~~Pi~av~~~~~i~~~ 310 (461)
T PRK07482 291 LTSAYAPLSGSIVGEKVWDV 310 (461)
T ss_pred cccCccccceeeecHHHHHH
Confidence 8653 23666677776543
No 368
>PRK07036 hypothetical protein; Provisional
Probab=97.95 E-value=0.00071 Score=63.72 Aligned_cols=207 Identities=12% Similarity=0.093 Sum_probs=102.9
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCC-ChHHHHHHHHhh---c
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLS-GSPSNFQVYTAL---L 133 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~s-G~~a~~~~~~al---~ 133 (295)
-.|++.+++.+.+.. ...... +.. ...+....+.+.+.+....+.+ .++|++ |+.|+.+++... .
T Consensus 68 ~~p~v~~Ai~~q~~~-~~~~~~----~~~--~~~~~~~~lae~L~~~~p~~~~----~v~f~~sGseAve~AlklAr~~~ 136 (466)
T PRK07036 68 GREEMADAIADQARR-LPYYTP----FGD--MTNAPAAELAAKLAELAPGDLN----HVFLTTGGSTAVDSALRFVHYYF 136 (466)
T ss_pred CCHHHHHHHHHHHHh-Cccccc----ccc--cCCHHHHHHHHHHHHhCCCCcC----EEEEeCCchHHHHHHHHHHHHHH
Confidence 478999999888765 211110 000 0112223355667666543333 456655 555777655533 1
Q ss_pred ---C-C-CCeEEEecCCCCcccCccccc-----cccccccceeeeEEEeeecCCC-CCCC--------CHHHHHHHHhh-
Q 022564 134 ---K-P-HDRIMALDLPHGGHLSHGYQT-----DTKKISAVSIFFETMPYRLNES-TGYI--------DYDQLEKSATL- 193 (295)
Q Consensus 134 ---~-~-gd~Vl~~~~~~~~~~~~~~~~-----~~~~~~~~g~~~~~v~~~~~~~-~~~i--------d~e~l~~~i~~- 193 (295)
. + ..+|+...-.|.+........ ++....-....+..++.+.... .... ..+++++.+..
T Consensus 137 ~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 216 (466)
T PRK07036 137 NVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLVDEFEDKILSL 216 (466)
T ss_pred HhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCcccccccCCChHHHHHHHHHHHHHHHHHc
Confidence 1 1 367888776665543111100 0000000000011122211000 0011 13445555532
Q ss_pred --cCCcEEEEc--CCCCCCccC----HHHHHHHHHHcCCEEEEEcccc-ccccc--cCCC-CCCCCcceEEEeCCCCCCC
Q 022564 194 --FRPKLIVAG--ASAYARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVA--AGVI-PSPFEYADVVTTTTHKSLR 261 (295)
Q Consensus 194 --~~tk~i~l~--~~n~~~~~~----l~~I~~ia~~~~~~vivD~a~~-~g~~~--~~~~-~~~~~~~D~~~~s~~K~l~ 261 (295)
.++.+|++- ..+.|...+ +++|.++|++||+++|+|+.+. +|-.. .... ..++ ..|++++ .|.++
T Consensus 217 ~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~~gv-~PDivt~--gK~l~ 293 (466)
T PRK07036 217 GADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGHFFASEAVFGI-QPDIITF--AKGLT 293 (466)
T ss_pred CCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCchhhhhhhhcCC-CCCEEEE--ccccc
Confidence 256777774 222244344 8899999999999999999984 33221 1111 1111 2788765 79886
Q ss_pred CC--ceEEEEEeCCchhhh
Q 022564 262 GP--RGAMIFFRKGVKEIN 278 (295)
Q Consensus 262 gp--~gG~l~~~~~~~~~~ 278 (295)
|. +-|.+++++++.+..
T Consensus 294 gG~~Pi~av~~~~~i~~~~ 312 (466)
T PRK07036 294 SGYQPLGAVIISERLLDVI 312 (466)
T ss_pred cCccccEEEEEcHHHHHHH
Confidence 64 346677888876654
No 369
>PRK07483 hypothetical protein; Provisional
Probab=97.95 E-value=0.00075 Score=63.14 Aligned_cols=205 Identities=13% Similarity=0.075 Sum_probs=103.4
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeC-CChHHHHHHHHhh--c-
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSL-SGSPSNFQVYTAL--L- 133 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~-sG~~a~~~~~~al--~- 133 (295)
-.|.+.+++.+.+.+... -... .+. .+....+.+.+.+++....+ .++++ ||+.|+.+++... .
T Consensus 47 ~~p~v~~av~~ql~~~~~-~~~~--~~~-----~~~~~~lae~L~~~~p~~~~----~v~f~~sGsEAve~AlklAr~~~ 114 (443)
T PRK07483 47 SHPRVIAAIHAQIDRLAY-AHTS--FFT-----TEPAEALADRLVAAAPAGLE----HVYFVSGGSEAVEAALKLARQYF 114 (443)
T ss_pred CCHHHHHHHHHHHHhccC-cccc--ccC-----CHHHHHHHHHHHHhCCCCCC----EEEEcCCcHHHHHHHHHHHHHHH
Confidence 478999999988875210 0010 011 12222355677776542223 45555 4555777655533 1
Q ss_pred -----CCCCeEEEecCCCCcccCccccc-----ccc--ccccceeeeEEEeeecCCCCC--CC--------CHHHHHHHH
Q 022564 134 -----KPHDRIMALDLPHGGHLSHGYQT-----DTK--KISAVSIFFETMPYRLNESTG--YI--------DYDQLEKSA 191 (295)
Q Consensus 134 -----~~gd~Vl~~~~~~~~~~~~~~~~-----~~~--~~~~~g~~~~~v~~~~~~~~~--~i--------d~e~l~~~i 191 (295)
....+|+.....|.+...-...+ .+. .....+ ...++.+....+. .. .++++++.+
T Consensus 115 ~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 192 (443)
T PRK07483 115 VEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIE--AHHVSPCYAYREQRAGESDEAYGQRLADELEAKI 192 (443)
T ss_pred HhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCC--CEEeCCCccccccccCCCHHHHHHHHHHHHHHHH
Confidence 12356888776665543111110 000 000111 1112211100000 00 135666656
Q ss_pred hh---cCCcEEEEcC-C--CCC----CccCHHHHHHHHHHcCCEEEEEcccc-cccccc--CCCCCCCCcceEEEeCCCC
Q 022564 192 TL---FRPKLIVAGA-S--AYA----RLYDYERIRKVCNKQKAIMLADMAHI-SGLVAA--GVIPSPFEYADVVTTTTHK 258 (295)
Q Consensus 192 ~~---~~tk~i~l~~-~--n~~----~~~~l~~I~~ia~~~~~~vivD~a~~-~g~~~~--~~~~~~~~~~D~~~~s~~K 258 (295)
.. .++.+|++-+ . +.| ...-++.|.++|++||+++|.|+.+. +|-... .....++ ..|++++ .|
T Consensus 193 ~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~--gK 269 (443)
T PRK07483 193 LELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTGTLFACEEDGV-APDLVTI--AK 269 (443)
T ss_pred HhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCcHHHHHhhcCC-CCCeeee--hh
Confidence 42 2567777742 2 223 23348899999999999999999976 221110 0011111 2788877 78
Q ss_pred CCCCC--ceEEEEEeCCchhhhc
Q 022564 259 SLRGP--RGAMIFFRKGVKEINK 279 (295)
Q Consensus 259 ~l~gp--~gG~l~~~~~~~~~~~ 279 (295)
.++|. +-|.+++++++.+...
T Consensus 270 ~l~gG~~Pi~av~~~~~i~~~~~ 292 (443)
T PRK07483 270 GLGAGYQPIGAVLASDRIYDAIA 292 (443)
T ss_pred hhccCccccEEEEEcHHHHHHHh
Confidence 88654 3477888888765543
No 370
>PRK07480 putative aminotransferase; Validated
Probab=97.95 E-value=0.0006 Score=64.04 Aligned_cols=205 Identities=15% Similarity=0.089 Sum_probs=101.5
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEe-CCChHHHHHHHHhh---c
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQS-LSGSPSNFQVYTAL---L 133 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~-~sG~~a~~~~~~al---~ 133 (295)
-.|++.+++.+.+.... ... . .+. .......++.+.+.+++....+ .+++ +||+.|+.+++... .
T Consensus 67 ~~p~v~~Ai~~q~~~~~-~~~--~-~~~---~~~~~~~~lae~L~~~~p~~~~----~v~f~~SGseA~e~AlklAr~~~ 135 (456)
T PRK07480 67 GRKELADAAARQMRELP-YYN--T-FFK---TTHPPAIELAAKLAEVAPPGFN----HVFFTNSGSEANDTVLRMVRHYW 135 (456)
T ss_pred CCHHHHHHHHHHHHhcC-Ccc--c-ccc---cCCHHHHHHHHHHHHhCCCCcC----EEEEeCCcHHHHHHHHHHHHHHH
Confidence 47899999998886521 000 0 000 1112233355777777653333 4444 56666777665533 1
Q ss_pred ---C-C-CCeEEEecCCCCcccCcccccc-----cc--ccccceeeeEEEeeecCC-CCCCCC--------HHHHHHHHh
Q 022564 134 ---K-P-HDRIMALDLPHGGHLSHGYQTD-----TK--KISAVSIFFETMPYRLNE-STGYID--------YDQLEKSAT 192 (295)
Q Consensus 134 ---~-~-gd~Vl~~~~~~~~~~~~~~~~~-----~~--~~~~~g~~~~~v~~~~~~-~~~~id--------~e~l~~~i~ 192 (295)
. + ..+|+.....|.+......... .. +....+ +..++.+... .....+ .+++++.+.
T Consensus 136 ~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~--~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~ 213 (456)
T PRK07480 136 ALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPG--IVHIDQPYWFGEGGDMTPEEFGLAAARQLEAKIL 213 (456)
T ss_pred HhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCC--CeecCCCcccccccCCChHHHHHHHHHHHHHHHH
Confidence 1 2 3468877766555421111000 00 000011 1112211000 000011 356665553
Q ss_pred h---cCCcEEEEc-C-CCCCCccC----HHHHHHHHHHcCCEEEEEcccc-cccccc--CCCCCCCCcceEEEeCCCCCC
Q 022564 193 L---FRPKLIVAG-A-SAYARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAA--GVIPSPFEYADVVTTTTHKSL 260 (295)
Q Consensus 193 ~---~~tk~i~l~-~-~n~~~~~~----l~~I~~ia~~~~~~vivD~a~~-~g~~~~--~~~~~~~~~~D~~~~s~~K~l 260 (295)
. .++.+|++- . .+.|...+ +++|.++|++||+++|+|+++. +|-... .....++ ..|++++ .|.+
T Consensus 214 ~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~--gK~l 290 (456)
T PRK07480 214 ELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTGEWFGSQHFGI-KPDLMTI--AKGL 290 (456)
T ss_pred hcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhhhhhcCC-CCCeeee--ehhh
Confidence 2 256677774 2 22233333 8899999999999999999984 332211 1111111 2677655 7988
Q ss_pred CCC--ceEEEEEeCCchhhh
Q 022564 261 RGP--RGAMIFFRKGVKEIN 278 (295)
Q Consensus 261 ~gp--~gG~l~~~~~~~~~~ 278 (295)
+|. +-|.+++++++.+..
T Consensus 291 ~gG~~Pi~av~~~~~i~~~~ 310 (456)
T PRK07480 291 TSGYIPMGAVGVGDRVAEVL 310 (456)
T ss_pred ccCCccceEEEEcHHHHHHH
Confidence 753 236666677765543
No 371
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=97.91 E-value=0.00059 Score=64.05 Aligned_cols=204 Identities=14% Similarity=0.108 Sum_probs=102.2
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeC-CChHHHHHHHHhh--cC
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSL-SGSPSNFQVYTAL--LK 134 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~-sG~~a~~~~~~al--~~ 134 (295)
-.|.+.+++.+.+.+....+.. ....+...++.+.+.+++.....+ .++++ ||+.|+.+++... ..
T Consensus 71 ~~p~v~~ai~~q~~~~~~~~~~--------~~~~~~~~~la~~L~~~~p~~~~~---~v~f~~sGseA~e~AlklAr~~t 139 (451)
T PRK06918 71 SHPKVKEALHKQVDQYIHTGFN--------VMMYEPYIELAEKLAALAPGSFDK---KVLFLNSGAEAVENAVKIARKYT 139 (451)
T ss_pred CCHHHHHHHHHHHHhccCcccc--------ccccHHHHHHHHHHHHhCCCCCCC---EEEEcCCcHHHHHHHHHHHHHHh
Confidence 4789999999888762111100 011122333557777776532211 45555 5555877665543 23
Q ss_pred CCCeEEEecCCCCcccCccccc------ccc--ccccceeeeEEEeeecCC--CCCCCC-------HHHHHHHHh----h
Q 022564 135 PHDRIMALDLPHGGHLSHGYQT------DTK--KISAVSIFFETMPYRLNE--STGYID-------YDQLEKSAT----L 193 (295)
Q Consensus 135 ~gd~Vl~~~~~~~~~~~~~~~~------~~~--~~~~~g~~~~~v~~~~~~--~~~~id-------~e~l~~~i~----~ 193 (295)
...+|+.....|.+.......+ ++. +....+ +..+|++... ..+..+ ++.+++.+. .
T Consensus 140 gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (451)
T PRK06918 140 KRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPE--VYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNFFISEVAP 217 (451)
T ss_pred CCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCC--cEEcCCCccccccccCchHHHHHHHHHHHHHHHHhhcCC
Confidence 4467888776665543211111 000 000011 1122222100 001000 223444332 2
Q ss_pred cCCcEEEEc--CCCCC----CccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCC----cceEEEeCCCCCCCC-
Q 022564 194 FRPKLIVAG--ASAYA----RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE----YADVVTTTTHKSLRG- 262 (295)
Q Consensus 194 ~~tk~i~l~--~~n~~----~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~----~~D~~~~s~~K~l~g- 262 (295)
.++.+|++. ..+.| ...-+++|.++|++||+++|+|+.+. |....+. ...+. ..|++ +..|.+++
T Consensus 218 ~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~t-g~gr~g~-~~a~~~~~v~pDi~--t~sK~l~~G 293 (451)
T PRK06918 218 ETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQT-GFARTGK-YFAIEHFDVVPDLI--TVSKSLGAG 293 (451)
T ss_pred CceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CcCccCc-eehhHhcCCCCCEE--eeehhhcCC
Confidence 256677774 22212 23348899999999999999999965 2211221 11111 26644 67998853
Q ss_pred CceEEEEEeCCchhhh
Q 022564 263 PRGAMIFFRKGVKEIN 278 (295)
Q Consensus 263 p~gG~l~~~~~~~~~~ 278 (295)
.+-|++++++++.+..
T Consensus 294 ~pig~v~~~~~i~~~~ 309 (451)
T PRK06918 294 VPISGVIGRKEIMDES 309 (451)
T ss_pred CccEEEEEcHHHHhcc
Confidence 3338899988765543
No 372
>PRK06917 hypothetical protein; Provisional
Probab=97.88 E-value=0.00082 Score=62.98 Aligned_cols=204 Identities=15% Similarity=0.062 Sum_probs=106.7
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEe-CCChHHHHHHHHhhc---
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQS-LSGSPSNFQVYTALL--- 133 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~-~sG~~a~~~~~~al~--- 133 (295)
-.|++.+++.+.+.+. ...+.. .+. .+...++.+.+.+.+....+ .+++ +||+.|+.+++....
T Consensus 48 ~hp~v~~Ai~~ql~~~-~~~~~~--~~~-----~~~~~~lae~L~~~~p~~~~----~v~f~~sGsEAve~AlklAr~~~ 115 (447)
T PRK06917 48 GVKEIADAIKEQAEEV-SFVYRS--QFT-----SEPAEKLAKKLSDLSPGDLN----WSFFVNSGSEANETAMKIAIQHF 115 (447)
T ss_pred CCHHHHHHHHHHHhhC-cCcccc--ccC-----CHHHHHHHHHHHHhCCCCCC----EEEEeCChHHHHHHHHHHHHHHH
Confidence 4789999999888752 111110 011 12333356777777643322 3454 566668776665441
Q ss_pred -----CCCCeEEEecCCCCcccCccccccccc-------cccceeeeEEEeeecCC-----CC-C---CCCHHHHHHHHh
Q 022564 134 -----KPHDRIMALDLPHGGHLSHGYQTDTKK-------ISAVSIFFETMPYRLNE-----ST-G---YIDYDQLEKSAT 192 (295)
Q Consensus 134 -----~~gd~Vl~~~~~~~~~~~~~~~~~~~~-------~~~~g~~~~~v~~~~~~-----~~-~---~id~e~l~~~i~ 192 (295)
....+|+.....|.+...-........ ....+ +..++.+... ++ . .-+++.+++.++
T Consensus 116 ~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~--~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~i~ 193 (447)
T PRK06917 116 QERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLED--YPTISAPYCYRCPVQKVYPTCQLACATELETAIE 193 (447)
T ss_pred HhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCC--CeEeCCCcccccccCCChHHHHHHHHHHHHHHHH
Confidence 223678888766655432111100000 00001 1112211100 00 0 013467777775
Q ss_pred h---cCCcEEEEcC-CC-CC-----CccCHHHHHHHHHHcCCEEEEEccccccccccCC----CCCCCCcceEEEeCCCC
Q 022564 193 L---FRPKLIVAGA-SA-YA-----RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGV----IPSPFEYADVVTTTTHK 258 (295)
Q Consensus 193 ~---~~tk~i~l~~-~n-~~-----~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~----~~~~~~~~D~~~~s~~K 258 (295)
. .++.+|++-+ .. .+ ...-+++|.++|++||+++|+|+++. |.-..+. ...++ ..|++++ .|
T Consensus 194 ~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~t-GfGRtG~~~a~~~~gv-~PDi~~~--gK 269 (447)
T PRK06917 194 RIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMT-GLGRTGAMFAMEHWGV-EPDIMTL--GK 269 (447)
T ss_pred hcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhh-CcCcccchhhHHhcCC-CCCEEEe--ee
Confidence 3 2467777742 21 22 33448899999999999999999986 4311211 11111 2687655 89
Q ss_pred CCCCC--ceEEEEEeCCchhhhc
Q 022564 259 SLRGP--RGAMIFFRKGVKEINK 279 (295)
Q Consensus 259 ~l~gp--~gG~l~~~~~~~~~~~ 279 (295)
.++|. +.|++.+++++.+...
T Consensus 270 ~l~~G~~Pi~a~~~~~~i~~~~~ 292 (447)
T PRK06917 270 GLGAGYTPIAATVVSDRVMEPIL 292 (447)
T ss_pred hhccCCcceEEEEEcHHHHHHHh
Confidence 88754 3577778887765543
No 373
>PRK07481 hypothetical protein; Provisional
Probab=97.85 E-value=0.0011 Score=62.28 Aligned_cols=205 Identities=13% Similarity=0.074 Sum_probs=102.1
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCC-CCCCcceeEEeCC-ChHHHHHHHHhh---
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL-DPEKWGVNVQSLS-GSPSNFQVYTAL--- 132 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~-~~~~~~~~v~~~s-G~~a~~~~~~al--- 132 (295)
-.|++.+++.+.+.+.. .. .. +.+.. .+.+.++.+.+.++++. ..+ .+++++ |+.|+.+++...
T Consensus 59 ~~p~v~~Ai~~ql~~~~-~~--~~--~~~~~--~~~~~~lae~L~~~~~~~~~~----~v~f~~sGsEAve~AlklAr~~ 127 (449)
T PRK07481 59 NREEVKEAIVRQLDELE-YY--ST--FDGTT--HPRAIELSYELIDMFAPEGMR----RVFFSSGGSDSVETALKLARQY 127 (449)
T ss_pred CCHHHHHHHHHHHHhcc-ce--ec--ccccC--CHHHHHHHHHHHHhcCCCCCC----EEEEcCchHHHHHHHHHHHHHH
Confidence 46889999988876521 00 00 00001 12223355777777642 122 566655 555777665533
Q ss_pred c----CC-CCeEEEecCCCCcccCccccc-----ccc--ccccceeeeEEEeeecCCC-CCC-CCHHH--------HHHH
Q 022564 133 L----KP-HDRIMALDLPHGGHLSHGYQT-----DTK--KISAVSIFFETMPYRLNES-TGY-IDYDQ--------LEKS 190 (295)
Q Consensus 133 ~----~~-gd~Vl~~~~~~~~~~~~~~~~-----~~~--~~~~~g~~~~~v~~~~~~~-~~~-id~e~--------l~~~ 190 (295)
. .+ ..+|+.....|.+........ ++. .....| +..++.+.... .+. -|.++ +++.
T Consensus 128 ~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~d~~~~~~~~~~~le~~ 205 (449)
T PRK07481 128 WKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPG--CFHVETPWLYRNPFTEQDPEELARICARLLERE 205 (449)
T ss_pred HHhcCCCCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCC--CEEeCCCcccccccCCCCHHHHHHHHHHHHHHH
Confidence 1 12 357888887666542111110 000 000111 11122110000 011 13443 3444
Q ss_pred Hh---hcCCcEEEEc--CCCCCCcc----CHHHHHHHHHHcCCEEEEEcccc-cccccc--CCCCCCCCcceEEEeCCCC
Q 022564 191 AT---LFRPKLIVAG--ASAYARLY----DYERIRKVCNKQKAIMLADMAHI-SGLVAA--GVIPSPFEYADVVTTTTHK 258 (295)
Q Consensus 191 i~---~~~tk~i~l~--~~n~~~~~----~l~~I~~ia~~~~~~vivD~a~~-~g~~~~--~~~~~~~~~~D~~~~s~~K 258 (295)
+. ..++.+|++- ..+.|... -++++.++|++||+++|.|+.+. +|-... .....++ ..|++++ .|
T Consensus 206 i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~--gK 282 (449)
T PRK07481 206 IAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTGSWFGSRGWGV-KPDIMCL--AK 282 (449)
T ss_pred HHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCchhhHhhhcCC-CCCEEEE--ee
Confidence 43 1256778774 22223222 38899999999999999999976 222110 0111111 2788777 78
Q ss_pred CCCCC--ceEEEEEeCCchhhh
Q 022564 259 SLRGP--RGAMIFFRKGVKEIN 278 (295)
Q Consensus 259 ~l~gp--~gG~l~~~~~~~~~~ 278 (295)
.++|. +-|.+++++++.+..
T Consensus 283 gl~gG~~Pi~av~~~~~i~~~~ 304 (449)
T PRK07481 283 GITSGYVPLGATMVNARIADAF 304 (449)
T ss_pred cccCCCcCceEEEEcHHHHHHH
Confidence 88753 346677787766544
No 374
>PRK06148 hypothetical protein; Provisional
Probab=97.85 E-value=0.00046 Score=70.88 Aligned_cols=206 Identities=14% Similarity=0.103 Sum_probs=105.3
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhh--cCC
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTAL--LKP 135 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al--~~~ 135 (295)
-.|++.+++.+.+..... ... +. .+.+.++.+.+.+.+..+.+ ...+.+||+.|+.+++... ...
T Consensus 639 ~hp~v~~Ai~~q~~~l~~----~~~-~~-----~~~~~~lAe~L~~~~p~~~~---~v~f~nSGsEA~e~AlklAr~~tG 705 (1013)
T PRK06148 639 AHPRVVAAAARQAARLNT----NTR-YL-----HDAIVAYAERLTATLPDGLT---VAFFVNSGSEANSLALRLARAHTG 705 (1013)
T ss_pred CCHHHHHHHHHHHhhcCC----cCC-cC-----CHHHHHHHHHHHHhCCCCcC---EEEEeCCcHHHHHHHHHHHHHhcC
Confidence 378999999888765210 010 11 12223355677776643323 1344456666877665543 234
Q ss_pred CCeEEEecCCCCcccCccccc----cccccccce--eeeEEEeeecC-CCCCC-CC-------HHHHHHHHhh-----cC
Q 022564 136 HDRIMALDLPHGGHLSHGYQT----DTKKISAVS--IFFETMPYRLN-ESTGY-ID-------YDQLEKSATL-----FR 195 (295)
Q Consensus 136 gd~Vl~~~~~~~~~~~~~~~~----~~~~~~~~g--~~~~~v~~~~~-~~~~~-id-------~e~l~~~i~~-----~~ 195 (295)
..+|+.....|.+...-.... +.... ..+ ..+..++.+.. ...+. .| .+.+++.++. .+
T Consensus 706 r~~ii~~~~~YHG~t~~a~s~s~~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~ 784 (1013)
T PRK06148 706 QRDAIVLDHAYHGTTTELIDLSPYKFNRKG-GKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAAMAAKGRG 784 (1013)
T ss_pred CCeEEEEcCCccCCCcchhhcCchhhcccC-CCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHhhhccCCc
Confidence 567888877666553211110 00000 000 00111111100 00011 11 2345555531 24
Q ss_pred CcEEEEc--CCCCCCccC----HHHHHHHHHHcCCEEEEEcccc-cccccc---CCCCCCCCcceEEEeCCCCCCCCCce
Q 022564 196 PKLIVAG--ASAYARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAA---GVIPSPFEYADVVTTTTHKSLRGPRG 265 (295)
Q Consensus 196 tk~i~l~--~~n~~~~~~----l~~I~~ia~~~~~~vivD~a~~-~g~~~~---~~~~~~~~~~D~~~~s~~K~l~gp~g 265 (295)
+.++++- ..+.|...+ ++++.++|++||+++|.|+.|. +|-... .....++ ..|++++ .|.++|..-
T Consensus 785 iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv-~PDivt~--gK~lggG~P 861 (1013)
T PRK06148 785 PAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGV-VPDIVTM--GKPIGNGHP 861 (1013)
T ss_pred eEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhcCC-Ccceeee--cccccCCcc
Confidence 6677774 233343333 8899999999999999999984 432221 1111111 2788776 798865433
Q ss_pred -EEEEEeCCchhhhcc
Q 022564 266 -AMIFFRKGVKEINKQ 280 (295)
Q Consensus 266 -G~l~~~~~~~~~~~~ 280 (295)
|.+++++++.+....
T Consensus 862 lgav~~~~ei~~~~~~ 877 (1013)
T PRK06148 862 MGAVVTTREIADSFDN 877 (1013)
T ss_pred eEEEEEcHHHHhhccC
Confidence 888888887665433
No 375
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=97.85 E-value=0.00083 Score=63.26 Aligned_cols=203 Identities=10% Similarity=0.045 Sum_probs=105.3
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeC-CChHHHHHHHHhhc---
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSL-SGSPSNFQVYTALL--- 133 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~-sG~~a~~~~~~al~--- 133 (295)
-.|++.+++.+.+.+.. ..... .+. .+....+.+.+.+++....+ .++++ ||+.|+.+++....
T Consensus 64 ~~p~v~~Ai~~ql~~l~-~~~~~--~~~-----~~~~~~lae~L~~~~p~~~~----~v~f~~sGsEAve~AlKlAr~~~ 131 (466)
T PRK07030 64 ANPRINQRIKDQVDQLE-HVILA--GFS-----HEPVIELSERLVKITPPGLS----RCFYADNGSSAIEVALKMSFHYW 131 (466)
T ss_pred CCHHHHHHHHHHHHhcC-Ccccc--ccC-----CHHHHHHHHHHHHhCCCCcC----EEEEeCCcHHHHHHHHHHHHHHH
Confidence 47899999988886521 11100 011 12223355777776643233 45555 55557776655431
Q ss_pred -----CCCCeEEEecCCCCcccCccccc-----ccc--ccccceeeeEEEeeecCC-CCC--------CCCHHHHHHHHh
Q 022564 134 -----KPHDRIMALDLPHGGHLSHGYQT-----DTK--KISAVSIFFETMPYRLNE-STG--------YIDYDQLEKSAT 192 (295)
Q Consensus 134 -----~~gd~Vl~~~~~~~~~~~~~~~~-----~~~--~~~~~g~~~~~v~~~~~~-~~~--------~id~e~l~~~i~ 192 (295)
....+|+.....|.+........ ++. .....+ +..+|.+... ... .-+++++++.+.
T Consensus 132 ~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~--~~~~p~~~~~~~~~~~~~~~~~~~~l~~le~~~~ 209 (466)
T PRK07030 132 RNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLD--TIKVPSPDCYLRPEGMSWEEHSRRMFAHMEQTLA 209 (466)
T ss_pred HHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCC--CEEcCCCCccccccCCCHHHHHHHHHHHHHHHHH
Confidence 12357888876665542111100 000 000011 1122222100 000 113566777775
Q ss_pred h--cCCcEEEEcC--CCC-C----CccCHHHHHHHHHHcCCEEEEEcccc-cccccc--CCCCCCCCcceEEEeCCCCCC
Q 022564 193 L--FRPKLIVAGA--SAY-A----RLYDYERIRKVCNKQKAIMLADMAHI-SGLVAA--GVIPSPFEYADVVTTTTHKSL 260 (295)
Q Consensus 193 ~--~~tk~i~l~~--~n~-~----~~~~l~~I~~ia~~~~~~vivD~a~~-~g~~~~--~~~~~~~~~~D~~~~s~~K~l 260 (295)
. .++.+|++.+ ... | ...-+++|.++|++||+++|.|+.+. +|-... .....++ ..|++++ .|.+
T Consensus 210 ~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG~~~a~~~~gv-~PDiv~~--gKgl 286 (466)
T PRK07030 210 EHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGTMFACEQAGI-RPDFLCL--SKAL 286 (466)
T ss_pred hCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCccccchHHHhcCC-CCCEEee--ehhc
Confidence 2 2567777754 222 3 22348899999999999999999975 332211 0111111 2788887 7888
Q ss_pred CCC--ceEEEEEeCCchhh
Q 022564 261 RGP--RGAMIFFRKGVKEI 277 (295)
Q Consensus 261 ~gp--~gG~l~~~~~~~~~ 277 (295)
+|. +-|.+++++++.+.
T Consensus 287 ~gG~~Pi~av~~~~ei~~~ 305 (466)
T PRK07030 287 TGGYLPLAAVLTTDTVYQA 305 (466)
T ss_pred cCCcccceEEEecHHHHHH
Confidence 654 34888888887654
No 376
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=97.80 E-value=0.00038 Score=65.42 Aligned_cols=203 Identities=14% Similarity=0.121 Sum_probs=105.9
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEe-CCChHHHHHHHHhhc---
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQS-LSGSPSNFQVYTALL--- 133 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~-~sG~~a~~~~~~al~--- 133 (295)
-.|++.+++.+.+.+.. .... ..+ . .+.+.++.+.+.+++....+ .+++ .||+.|+.+++....
T Consensus 73 ~~p~v~~Ai~~ql~~l~-~~~~--~~~-~----~~~~~~lae~L~~~~p~~~~----~v~f~~SGseAve~AlklAr~~~ 140 (460)
T PRK06916 73 QVPELDEAIREQLNKIA-HSTL--LGL-A----NVPSILLAEKLIEVVPEGLK----KVFYSDSGATAVEIAIKMAFQYW 140 (460)
T ss_pred CCHHHHHHHHHHHHhCC-Cccc--ccc-C----CHHHHHHHHHHHHhCCCCCC----EEEEeCCcHHHHHHHHHHHHHHH
Confidence 47899999998887521 1110 001 1 12223355777777653323 4444 556667776555331
Q ss_pred ----CC-CCeEEEecCCCCcccCccccc-----cccc--cccceeeeEEEeeecC---CCCC------CCCHHHHHHHHh
Q 022564 134 ----KP-HDRIMALDLPHGGHLSHGYQT-----DTKK--ISAVSIFFETMPYRLN---ESTG------YIDYDQLEKSAT 192 (295)
Q Consensus 134 ----~~-gd~Vl~~~~~~~~~~~~~~~~-----~~~~--~~~~g~~~~~v~~~~~---~~~~------~id~e~l~~~i~ 192 (295)
.+ ..+|+.....|.+.......+ ++.. ....+ ...+|.+.. +... .-+++++++.++
T Consensus 141 ~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~--~~~~p~p~~~~~~~~~~~~~~~~~~~~~l~~~l~ 218 (460)
T PRK06916 141 QNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFE--AIKMPYPYTYRSPYGNDKAEIVKKHLEELEELLK 218 (460)
T ss_pred HhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCC--CEEeCCCcccccccCCChHHHHHHHHHHHHHHHH
Confidence 12 367888887666543211110 0000 00001 112222200 0000 124567777775
Q ss_pred h--cCCcEEEEcC--CCC-C----CccCHHHHHHHHHHcCCEEEEEccccccccccC-C---CCCCCCcceEEEeCCCCC
Q 022564 193 L--FRPKLIVAGA--SAY-A----RLYDYERIRKVCNKQKAIMLADMAHISGLVAAG-V---IPSPFEYADVVTTTTHKS 259 (295)
Q Consensus 193 ~--~~tk~i~l~~--~n~-~----~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~-~---~~~~~~~~D~~~~s~~K~ 259 (295)
. .++.+|++-+ ... | ...-+++|.++|++||+++|.|+.+. |.-..+ . ...++ ..|++++ .|.
T Consensus 219 ~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~T-G~GRtG~~~a~~~~gv-~PDiv~~--gK~ 294 (460)
T PRK06916 219 EKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVAT-GFGRTGKMFACEHENV-TPDIMTA--GKG 294 (460)
T ss_pred hCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhh-CCCcCchhhHHHhcCC-CCCeeee--ehh
Confidence 2 2567777743 222 2 33348899999999999999999974 221111 0 11111 2788765 788
Q ss_pred CCCC--ceEEEEEeCCchhhh
Q 022564 260 LRGP--RGAMIFFRKGVKEIN 278 (295)
Q Consensus 260 l~gp--~gG~l~~~~~~~~~~ 278 (295)
++|. +-|.+++++++.+..
T Consensus 295 l~gG~~Pi~av~~~~ei~~~~ 315 (460)
T PRK06916 295 LTGGYLPIAITVTTDEIYNAF 315 (460)
T ss_pred hhcCccccceeeecHHHHHHh
Confidence 8654 237788888776543
No 377
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=97.77 E-value=0.0011 Score=62.37 Aligned_cols=201 Identities=11% Similarity=0.116 Sum_probs=102.1
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCC--CCcceeE-Ee-CCChHHHHHHHHhh-
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDP--EKWGVNV-QS-LSGSPSNFQVYTAL- 132 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~--~~~~~~v-~~-~sG~~a~~~~~~al- 132 (295)
-.|.+.+++.+.+.+..... .. .+. + +.+.++.+.+.+.+..+- .. .+ ++ .||+.|+.+++...
T Consensus 80 ~~p~v~~Ai~~ql~~~~~~~--~~-~~~-~----~~~~~la~~L~~~~p~~~~~~~---~v~f~~~SGSEAve~AlklAr 148 (464)
T PRK06938 80 NHPVVIEAIQQVLADELPLH--TL-DLT-T----PVKDQFVQDLFASLPEAFAREA---KIQFCGPTGTDAVEAALKLVK 148 (464)
T ss_pred CCHHHHHHHHHHHHhhhccc--cc-ccC-C----HHHHHHHHHHHHhCcccccccc---eEEEeCCCcHHHHHHHHHHHH
Confidence 47899999998886422111 00 011 1 222223455555543211 01 34 43 47888777665543
Q ss_pred -cCCCCeEEEecCCCCcccCccccc-----ccccc--ccceeeeEEEeeecCCC--------C-CCCCHHHHHHHHhhc-
Q 022564 133 -LKPHDRIMALDLPHGGHLSHGYQT-----DTKKI--SAVSIFFETMPYRLNES--------T-GYIDYDQLEKSATLF- 194 (295)
Q Consensus 133 -~~~gd~Vl~~~~~~~~~~~~~~~~-----~~~~~--~~~g~~~~~v~~~~~~~--------~-~~id~e~l~~~i~~~- 194 (295)
.....+|+.....|.+.......+ ++... ...+ +..++++.... + ...+++.+++.+.+.
T Consensus 149 ~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~--~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~ 226 (464)
T PRK06938 149 TATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPG--VQFLPYPYDYRCPFGLGGEAGVRANLHYLENLLDDPE 226 (464)
T ss_pred HhhCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCC--cEEeCCCccccccccCchhhHHHHHHHHHHHHHHhhc
Confidence 234467888776665543211110 00000 0011 22333321100 0 012367788888631
Q ss_pred ----CCcEEEEc--CCCCC----CccCHHHHHHHHHHcCCEEEEEcccc-cccccc--CCCCCCCCcceEEEeCCCCCCC
Q 022564 195 ----RPKLIVAG--ASAYA----RLYDYERIRKVCNKQKAIMLADMAHI-SGLVAA--GVIPSPFEYADVVTTTTHKSLR 261 (295)
Q Consensus 195 ----~tk~i~l~--~~n~~----~~~~l~~I~~ia~~~~~~vivD~a~~-~g~~~~--~~~~~~~~~~D~~~~s~~K~l~ 261 (295)
++.+|++- ..+.| ...-++++.++|++||+++|.|+.+. +|-... .....++ ..|++++ .|.++
T Consensus 227 ~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~e~~gv-~PDiv~~--gKglg 303 (464)
T PRK06938 227 SGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTGKMFAFEHAGI-IPDVVVL--SKAIG 303 (464)
T ss_pred cCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcHHHHHHhcCC-CCCEEEe--ecccc
Confidence 46777774 22212 33348899999999999999999975 221110 1111111 2788887 68786
Q ss_pred CCce-EEEEEeCCc
Q 022564 262 GPRG-AMIFFRKGV 274 (295)
Q Consensus 262 gp~g-G~l~~~~~~ 274 (295)
|.-- |.+++++++
T Consensus 304 gG~PlsAv~~~~~~ 317 (464)
T PRK06938 304 GSLPLAVVVYREWL 317 (464)
T ss_pred CCCceEEEeehhHh
Confidence 5333 777777765
No 378
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=97.74 E-value=0.0015 Score=57.19 Aligned_cols=104 Identities=15% Similarity=0.169 Sum_probs=62.5
Q ss_pred CHHHHHHHHhhcCCcEEEEcC--CCCCCcc----CHHHHHHHHHHcCCEEEEEccccccccccCCCC--CCCCcceEEEe
Q 022564 183 DYDQLEKSATLFRPKLIVAGA--SAYARLY----DYERIRKVCNKQKAIMLADMAHISGLVAAGVIP--SPFEYADVVTT 254 (295)
Q Consensus 183 d~e~l~~~i~~~~tk~i~l~~--~n~~~~~----~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~--~~~~~~D~~~~ 254 (295)
|.++++.++++.+.+++++-+ ..-|.+. =+++..++|.+|++++|.|+.|..-..-..+.. ..--..|+++.
T Consensus 195 d~eale~~l~~~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk~la~d~env~PDivil 274 (427)
T KOG1402|consen 195 DAEALEVALKSPNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGKLLACDYENVRPDIVIL 274 (427)
T ss_pred CHHHHHHHhcCCCeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCcEEEeehhhcCCCeEEE
Confidence 789999999876777777641 1113222 288999999999999999999863222221110 00012677764
Q ss_pred CCCCCCCCCc-e-EEEEEeCCchhhhccC-CeeEEEe
Q 022564 255 TTHKSLRGPR-G-AMIFFRKGVKEINKQG-KEFTCRC 288 (295)
Q Consensus 255 s~~K~l~gp~-g-G~l~~~~~~~~~~~~~-~~~~~~~ 288 (295)
.|.|.|.- - ..++..+++...++.| +..+|.+
T Consensus 275 --gKalSGG~~Pvsavl~~~~im~~~~pgeHgsTygg 309 (427)
T KOG1402|consen 275 --GKALSGGVYPVSAVLADDDIMLNIKPGEHGSTYGG 309 (427)
T ss_pred --eccccCCeeeeEEEEecHHHHhccCCCccccccCC
Confidence 47775522 2 4455555554445555 6666643
No 379
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=97.73 E-value=0.0012 Score=62.24 Aligned_cols=203 Identities=11% Similarity=0.042 Sum_probs=104.3
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCC-----CCCCcceeEEe-CCChHHHHHHHHh
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL-----DPEKWGVNVQS-LSGSPSNFQVYTA 131 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~-----~~~~~~~~v~~-~sG~~a~~~~~~a 131 (295)
-.|++.+++.+.+.+ ....... .+. .+....+.+.+.+++.. +.+ .+++ .||+.|+.+++..
T Consensus 81 ~~p~i~~Ai~~q~~~-l~~~~~~--~~~-----~~~~~~lae~L~~~~p~~~~~~~~~----~v~f~~sGSEAvE~AlKl 148 (472)
T PRK08742 81 AEPRIGAAIAAQAGE-LEQVMLA--GFT-----HEPAVQLAEQLLAIAPRQDGRAPLS----KVFYADNGSAGVEVALKM 148 (472)
T ss_pred CCHHHHHHHHHHHHh-CCCcccc--ccC-----CHHHHHHHHHHHHhCCCcccCCCCC----EEEEeCCchHHHHHHHHH
Confidence 478999999887754 2111110 011 12223355677766532 122 4555 5555577766554
Q ss_pred hc--------CCCCeEEEecCCCCcccCccccc-----cccc--cccceeeeEEEeeecCC-CCC--------CCCHHHH
Q 022564 132 LL--------KPHDRIMALDLPHGGHLSHGYQT-----DTKK--ISAVSIFFETMPYRLNE-STG--------YIDYDQL 187 (295)
Q Consensus 132 l~--------~~gd~Vl~~~~~~~~~~~~~~~~-----~~~~--~~~~g~~~~~v~~~~~~-~~~--------~id~e~l 187 (295)
.. ....+|+.....|.+........ ++.. ....+ +..++.+... ... ..+++.+
T Consensus 149 Ar~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~--~~~~~~p~~~~~~~~~~~~~~~~~~~~~l 226 (472)
T PRK08742 149 AFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLE--SLFAPSPDAYLAEPGQSAEDYALQAADAL 226 (472)
T ss_pred HHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCC--CEEeCCCCccccccCCCHHHHHHHHHHHH
Confidence 31 12367888887666543211111 0000 00001 1122221000 000 1135677
Q ss_pred HHHHhh--cCCcEEEEcC--CCC-C----CccCHHHHHHHHHHcCCEEEEEcccc-cccccc--CCCCCCCCcceEEEeC
Q 022564 188 EKSATL--FRPKLIVAGA--SAY-A----RLYDYERIRKVCNKQKAIMLADMAHI-SGLVAA--GVIPSPFEYADVVTTT 255 (295)
Q Consensus 188 ~~~i~~--~~tk~i~l~~--~n~-~----~~~~l~~I~~ia~~~~~~vivD~a~~-~g~~~~--~~~~~~~~~~D~~~~s 255 (295)
++.+.. .++.+|++-+ .+. | ...-++++.++|++||+++|.|+.+. +|-... .....++ ..|++++
T Consensus 227 ~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG~~~a~e~~gv-~PDiv~~- 304 (472)
T PRK08742 227 QALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTGTLFACEQAGV-MPDLLCL- 304 (472)
T ss_pred HHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchHHHhcCC-CCCEEEE-
Confidence 777742 2567777753 222 2 23348899999999999999999975 332211 0111111 2788887
Q ss_pred CCCCCCCC--ceEEEEEeCCchhh
Q 022564 256 THKSLRGP--RGAMIFFRKGVKEI 277 (295)
Q Consensus 256 ~~K~l~gp--~gG~l~~~~~~~~~ 277 (295)
.|.++|. +-|.+++++++.+.
T Consensus 305 -gKgl~gG~~Plaav~~~~ei~~~ 327 (472)
T PRK08742 305 -SKGLTGGFLPLSAVLATQQLYDA 327 (472)
T ss_pred -cccccCCCCCcceeeccHHHHHH
Confidence 7888654 23777778776554
No 380
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=97.66 E-value=0.0036 Score=58.88 Aligned_cols=202 Identities=13% Similarity=0.108 Sum_probs=100.1
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCC-CCCcceeEEe-CCChHHHHHHHHhh--c
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLD-PEKWGVNVQS-LSGSPSNFQVYTAL--L 133 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~-~~~~~~~v~~-~sG~~a~~~~~~al--~ 133 (295)
-.|++.+++.+.+....... .. .+ ..+...++.+.+.+.+... .+. ..+++ .||+.|+.+++... .
T Consensus 75 ~~p~v~~Ai~~q~~~~~~~~--~~-~~-----~~~~~~~lAe~L~~~~p~~~~~~--~~~f~~~SGsEAve~AlklAr~~ 144 (459)
T PRK06931 75 NHPDVLQSIQDVLTSGLPLH--TL-DL-----TTPLKDAFSEYLLSLLPGQGKEY--CLQFTGPSGADAVEAAIKLAKTY 144 (459)
T ss_pred CCHHHHHHHHHHHhhhcccc--cc-cc-----CCHHHHHHHHHHHHhCCCccccc--eEEEeCCCcHHHHHHHHHHHHHh
Confidence 47899999998876421100 00 01 1123333556777766432 111 03455 57877777665543 2
Q ss_pred CCCCeEEEecCCCCcccCccccc-----ccccc--ccceeeeEEEeeecCC----C-CCCCCHHHH----HHHHhh----
Q 022564 134 KPHDRIMALDLPHGGHLSHGYQT-----DTKKI--SAVSIFFETMPYRLNE----S-TGYIDYDQL----EKSATL---- 193 (295)
Q Consensus 134 ~~gd~Vl~~~~~~~~~~~~~~~~-----~~~~~--~~~g~~~~~v~~~~~~----~-~~~id~e~l----~~~i~~---- 193 (295)
...++|+.....|.+........ ++... ...+ +..++++... + ...-+.+.+ ++.+..
T Consensus 145 tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (459)
T PRK06931 145 TGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPG--VQFMPYPHEYRCPLGIGGEAGVKALTYYFENFIEDVESG 222 (459)
T ss_pred cCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCC--cEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhhcC
Confidence 45567888887676553211110 00000 0111 2223322100 0 001123333 333321
Q ss_pred -cCCcEEEEc--CCCCC----CccCHHHHHHHHHHcCCEEEEEcccc-cccccc--CCCCCCCCcceEEEeCCCCCCCCC
Q 022564 194 -FRPKLIVAG--ASAYA----RLYDYERIRKVCNKQKAIMLADMAHI-SGLVAA--GVIPSPFEYADVVTTTTHKSLRGP 263 (295)
Q Consensus 194 -~~tk~i~l~--~~n~~----~~~~l~~I~~ia~~~~~~vivD~a~~-~g~~~~--~~~~~~~~~~D~~~~s~~K~l~gp 263 (295)
.++.+|++- ..+.| ...-++++.++|++||+++|.|+.+. +|-... .....++ ..|++++ .|.++|.
T Consensus 223 ~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~~~a~~~~gv-~PDivt~--gK~l~gG 299 (459)
T PRK06931 223 VRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTGKMFAFEHAGI-EPDIIVM--SKAVGGG 299 (459)
T ss_pred CCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCchHHHhhhcCC-CCCEEEe--cccccCC
Confidence 136677773 22222 23348899999999999999999975 321110 1111111 2788877 6877553
Q ss_pred ce-EEEEEeCCc
Q 022564 264 RG-AMIFFRKGV 274 (295)
Q Consensus 264 ~g-G~l~~~~~~ 274 (295)
-- |.+..++++
T Consensus 300 ~Pi~av~~~~~~ 311 (459)
T PRK06931 300 LPLAVLGIKKEF 311 (459)
T ss_pred cceeeeeeHHHH
Confidence 22 667777664
No 381
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=97.62 E-value=0.0022 Score=59.83 Aligned_cols=84 Identities=15% Similarity=0.168 Sum_probs=51.8
Q ss_pred HHHHHHHHhh--cCCcEEEEc--CCCCC----CccCHHHHHHHHHHcCCEEEEEcccc-ccccccC--CCCCCCCcceEE
Q 022564 184 YDQLEKSATL--FRPKLIVAG--ASAYA----RLYDYERIRKVCNKQKAIMLADMAHI-SGLVAAG--VIPSPFEYADVV 252 (295)
Q Consensus 184 ~e~l~~~i~~--~~tk~i~l~--~~n~~----~~~~l~~I~~ia~~~~~~vivD~a~~-~g~~~~~--~~~~~~~~~D~~ 252 (295)
++++++.+.. .++.++++. ..+.| ....+++|.++|++||+++|+|++|+ +|..... ....++ ..|++
T Consensus 205 l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~a~~~~gv-~PDi~ 283 (431)
T TIGR03251 205 LRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGVGLTGTAWAYQQLGV-QPDIV 283 (431)
T ss_pred HHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhccCccchHHHHHhcCC-CCCEE
Confidence 4556666642 367788884 22223 33468899999999999999999987 3332100 011111 37888
Q ss_pred EeCCCCCCCCCceEEEEEeC
Q 022564 253 TTTTHKSLRGPRGAMIFFRK 272 (295)
Q Consensus 253 ~~s~~K~l~gp~gG~l~~~~ 272 (295)
++ .|.+ |.+|++..++
T Consensus 284 ~~--gK~~--~~~g~~~~~~ 299 (431)
T TIGR03251 284 AF--GKKT--QVCGIMAGRR 299 (431)
T ss_pred Ee--cccC--ccceEEecch
Confidence 75 5654 5567776543
No 382
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=97.32 E-value=0.0042 Score=57.32 Aligned_cols=103 Identities=17% Similarity=0.202 Sum_probs=60.1
Q ss_pred HHHHHHHHhhc---CCcEEEEc---CCCCC----CccCHHHHHHHHHHcCCEEEEEccccccccccC----CCCCCCCcc
Q 022564 184 YDQLEKSATLF---RPKLIVAG---ASAYA----RLYDYERIRKVCNKQKAIMLADMAHISGLVAAG----VIPSPFEYA 249 (295)
Q Consensus 184 ~e~l~~~i~~~---~tk~i~l~---~~n~~----~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~----~~~~~~~~~ 249 (295)
.++|++.+..+ +..++++- ...-| ...=++++.++|++||+++|.|+. ..|.-..+ .+..++ ..
T Consensus 200 a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV-~tGFGRTG~~FA~e~~gi-~P 277 (449)
T COG0161 200 ADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEV-ATGFGRTGKMFACEHAGI-VP 277 (449)
T ss_pred HHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecc-eeCCCcCchhhhhhhcCC-CC
Confidence 66777777652 45566652 11112 222388999999999999999998 33322221 111110 25
Q ss_pred eEEEeCCCCCCCCCce--EEEEEeCCchhhhccC-CeeEEEeEE
Q 022564 250 DVVTTTTHKSLRGPRG--AMIFFRKGVKEINKQG-KEFTCRCFM 290 (295)
Q Consensus 250 D~~~~s~~K~l~gp~g--G~l~~~~~~~~~~~~~-~~~~~~~~~ 290 (295)
|+++. .|.|.|..- |.+++++++.+...++ ..--+++++
T Consensus 278 Di~~~--aKGLT~GY~Pl~a~l~~~~I~~~~~~~~~~~f~HG~T 319 (449)
T COG0161 278 DILCL--AKGLTGGYLPLSAVLTSDRIYEAFSDGDAGAFMHGHT 319 (449)
T ss_pred Ceeee--cccccccchhhHhHhhhHHHHHHHhcccCCeeccCCc
Confidence 77665 587755332 7777777777766555 333344443
No 383
>PRK08297 L-lysine aminotransferase; Provisional
Probab=97.15 E-value=0.0048 Score=57.77 Aligned_cols=84 Identities=15% Similarity=0.180 Sum_probs=52.0
Q ss_pred CHHHHHHHHhh--cCCcEEEEc--CCCCC----CccCHHHHHHHHHHcCCEEEEEcccc-ccccccC--CCCCCCCcceE
Q 022564 183 DYDQLEKSATL--FRPKLIVAG--ASAYA----RLYDYERIRKVCNKQKAIMLADMAHI-SGLVAAG--VIPSPFEYADV 251 (295)
Q Consensus 183 d~e~l~~~i~~--~~tk~i~l~--~~n~~----~~~~l~~I~~ia~~~~~~vivD~a~~-~g~~~~~--~~~~~~~~~D~ 251 (295)
+++++++.+.. .++.++++. ..+.| ....+++|.++|++||+++|.|+++. +|-.... ....++ ..|+
T Consensus 211 ~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv-~PDi 289 (443)
T PRK08297 211 ALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGVGLTGTAWAYQQLGV-RPDI 289 (443)
T ss_pred HHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCccchHHHHHhcCC-CCCE
Confidence 34566677752 257788774 22223 34568899999999999999999985 3322110 011111 2788
Q ss_pred EEeCCCCCCCCCceEEEEEe
Q 022564 252 VTTTTHKSLRGPRGAMIFFR 271 (295)
Q Consensus 252 ~~~s~~K~l~gp~gG~l~~~ 271 (295)
+++ .|.+ |.+|++..+
T Consensus 290 v~~--gK~l--~~~a~l~~~ 305 (443)
T PRK08297 290 VAF--GKKT--QVCGIMAGR 305 (443)
T ss_pred EEe--cccc--cccceecch
Confidence 864 7876 455666554
No 384
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=97.14 E-value=0.013 Score=52.80 Aligned_cols=207 Identities=16% Similarity=0.142 Sum_probs=109.2
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhhcC--
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLK-- 134 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al~~-- 134 (295)
..|++.++|.+-+.. ..+. .. +. -..+.++ +.+.+.+..+-... ..|+|++..+ |+..++....+
T Consensus 73 anpev~ral~~q~~k-~~hs--~~---~~-~t~eav~--l~~~l~~~~~~~~~---~rvff~nsGTeAne~ALK~Ark~~ 140 (433)
T KOG1401|consen 73 ANPEVARALAEQAKK-LGHS--SN---GY-FTLEAVE--LEEVLSAVLGKGSA---ERVFFCNSGTEANETALKFARKFT 140 (433)
T ss_pred CCHHHHHHHHHHHhh-heec--cC---cc-ccHHHHH--HHHHHHhcccCCCc---cEEEEecCCcHHHHHHHHHHHHhh
Confidence 478999999876654 2111 00 00 1112222 44666665543222 1566655544 88866554321
Q ss_pred ----CCC--eEEEecCCCCcccCcccccccccccccee-----eeEEEeeecCCCCCCCCHHHHHHHHhhcC--CcEEEE
Q 022564 135 ----PHD--RIMALDLPHGGHLSHGYQTDTKKISAVSI-----FFETMPYRLNESTGYIDYDQLEKSATLFR--PKLIVA 201 (295)
Q Consensus 135 ----~gd--~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~-----~~~~v~~~~~~~~~~id~e~l~~~i~~~~--tk~i~l 201 (295)
+-+ +++.....|.+...-... .....-.+. ...++... --|..++++.++.++ ..+|++
T Consensus 141 ~~~~~~~~t~~Iaf~nsyHG~tlgals--~~~~s~y~~~~~p~~p~v~~~~------ynd~t~l~k~~~~h~~~IaAVIv 212 (433)
T KOG1401|consen 141 GKKHPEKKTKFIAFENSYHGRTLGALS--VTGNSKYGLPFDPIAPDVVTAE------YNDSTALEKLFESHKGEIAAVIV 212 (433)
T ss_pred cccCCccceeEEEEecCcCCcchhHHH--hhcccccCCCCCCCCCceeecc------cCCHHHHHHHHHhCCCceEEEEE
Confidence 223 378777666554211111 000000110 01111111 237899999998744 467777
Q ss_pred c-CCCCC-----CccCHHHHHHHHHHcCCEEEEEccccccccccCCC-C-CCC-CcceEEEeCCCCCCCCCce-EEEEEe
Q 022564 202 G-ASAYA-----RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI-P-SPF-EYADVVTTTTHKSLRGPRG-AMIFFR 271 (295)
Q Consensus 202 ~-~~n~~-----~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~-~-~~~-~~~D~~~~s~~K~l~gp~g-G~l~~~ 271 (295)
- ....| ..+-+..|..+|+++|+++|.|+.+. |....+.. . .-+ ...|+++ .-|.|+|.-- |+..++
T Consensus 213 EPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~t-G~gR~g~~~a~e~~~~~PDI~t--~aK~L~gGlPigA~~v~ 289 (433)
T KOG1401|consen 213 EPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQT-GLGRLGYGWAQEYFGVTPDITT--VAKPLGGGLPIGATGVR 289 (433)
T ss_pred ecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhh-CccccchHHHHHHhCcCCccee--ehhhccCCceeEEEeeh
Confidence 4 22333 34457789999999999999999975 22221110 0 000 0256654 4688865544 888888
Q ss_pred CCchhhhccCCeeEEEe
Q 022564 272 KGVKEINKQGKEFTCRC 288 (295)
Q Consensus 272 ~~~~~~~~~~~~~~~~~ 288 (295)
+++.+....+.. .|++
T Consensus 290 ~kV~~~i~~~~~-l~hg 305 (433)
T KOG1401|consen 290 DKVAEMISPGDH-LYHG 305 (433)
T ss_pred HHHHhhcCCCCc-cccC
Confidence 888776655544 4443
No 385
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=97.11 E-value=0.012 Score=55.32 Aligned_cols=76 Identities=17% Similarity=0.218 Sum_probs=48.5
Q ss_pred CHHHHHHHHhh--cCCcEEEEc--CCCCCCccC----HHHHHHHHHHcCCEEEEEccccccccccCC----CCCCCC-cc
Q 022564 183 DYDQLEKSATL--FRPKLIVAG--ASAYARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGV----IPSPFE-YA 249 (295)
Q Consensus 183 d~e~l~~~i~~--~~tk~i~l~--~~n~~~~~~----l~~I~~ia~~~~~~vivD~a~~~g~~~~~~----~~~~~~-~~ 249 (295)
+++++++++++ .++.+|++. ..+.|...+ +++|.++|++||+++|+|++|. |.-..+. ...++. ..
T Consensus 237 ~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~t-GfGrtG~~fa~e~~gv~~~P 315 (464)
T TIGR00699 237 CLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQT-GVGATGKFWAHEHWNLDDPP 315 (464)
T ss_pred HHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeeeee-CCCCCcchhHHHhcCCCCCC
Confidence 46677777753 256777774 333344455 9999999999999999999984 3322111 111221 27
Q ss_pred eEEEeCCCCCCC
Q 022564 250 DVVTTTTHKSLR 261 (295)
Q Consensus 250 D~~~~s~~K~l~ 261 (295)
|++++ .|.++
T Consensus 316 Di~t~--gK~lg 325 (464)
T TIGR00699 316 DMVTF--SKKFQ 325 (464)
T ss_pred CEEEe--hhhhc
Confidence 88655 78773
No 386
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=96.88 E-value=0.015 Score=49.98 Aligned_cols=213 Identities=15% Similarity=0.097 Sum_probs=115.0
Q ss_pred cCceecCCCCCCCHHHHHHHhhhhhccCCCCCC-CCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCC--hH
Q 022564 47 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYP-GARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSG--SP 123 (295)
Q Consensus 47 ~~i~L~~~~~~~~~~v~~al~~~l~~~~~~g~~-~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG--~~ 123 (295)
..+|+.+|...+|..|...+.+.+-+--..|.. ......+ .....+.+.....+.++++++... .|+|.-| +.
T Consensus 7 ~vvnFaaGPAklp~~VL~e~qkdl~n~~g~GisV~EmSHRs-k~f~kii~~tes~lreLlniPdn~---~vlf~QGGGt~ 82 (370)
T KOG2790|consen 7 RVVNFAAGPAKLPESVLLEAQKDLLNFNGSGISVMEMSHRS-KDFAKIINDTESLLRELLNIPDNY---KVLFLQGGGTG 82 (370)
T ss_pred ceeecCCCcccCCHHHHHHHHHHhhccCCCcceEEEecccc-hhHHHHHHHHHHHHHHHHcCCCce---eEEEEeCCCcc
Confidence 468999998889999999998877662111211 1111112 334566667778899999997652 5655433 33
Q ss_pred HHHHHHHhh--cCCC---CeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCC--CCCCHHHHHHHHhhcCC
Q 022564 124 SNFQVYTAL--LKPH---DRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNEST--GYIDYDQLEKSATLFRP 196 (295)
Q Consensus 124 a~~~~~~al--~~~g---d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~--~~id~e~l~~~i~~~~t 196 (295)
-..++...+ ++.| |-|++-... .-.+.. +...|....+++ +...-. -.+|.+.++- ++ +.
T Consensus 83 qFaAv~lNL~glK~g~~AdYiVTGsWS--------~KA~~E-Akk~~~~~~V~~-~~k~y~ygkvPd~~~w~~--~~-da 149 (370)
T KOG2790|consen 83 QFAAVPLNLIGLKHGRCADYVVTGSWS--------AKAAEE-AKKYGTPNIVIP-KLKSYTYGKVPDPSTWEL--NP-DA 149 (370)
T ss_pred cccccchhhhccccCCccceEEecccc--------HHHHHH-HHhhCCceEEec-cccccccCcCCChhhccc--CC-Cc
Confidence 333333444 3555 344432211 001111 111111111121 222112 2456666542 22 56
Q ss_pred cEEEEcC--CCCCCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCce-EEEEEeCC
Q 022564 197 KLIVAGA--SAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKG 273 (295)
Q Consensus 197 k~i~l~~--~n~~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~ 273 (295)
+.++.|. +-.|..++.-. +-.-+|.+++.|.+.-+-..+.+... -++++....|++ ||.| -++++|++
T Consensus 150 ~yvyyCaNETVHGVEf~~~P---~~~~~~~vlVaDmSSnflSrpvDvsk-----~gvi~aGAQKN~-G~aG~Tvvivr~d 220 (370)
T KOG2790|consen 150 SYVYYCANETVHGVEFDFIP---VNDPKGAVLVADMSSNFLSRPVDVSK-----FGVIFAGAQKNV-GPAGVTVVIVRKD 220 (370)
T ss_pred cEEEEecCceeeceecCCCC---CCCCCCceEEEecccchhcCCccchh-----cceEEecccccc-CccccEEEEEehh
Confidence 6777772 22242221100 12346889999998555444444444 458999999987 7888 99999999
Q ss_pred chhhhccCCeeE
Q 022564 274 VKEINKQGKEFT 285 (295)
Q Consensus 274 ~~~~~~~~~~~~ 285 (295)
+.-...+..++.
T Consensus 221 llg~~~~~tP~v 232 (370)
T KOG2790|consen 221 LLGNALDITPSV 232 (370)
T ss_pred hhcccccCCccc
Confidence 876554444433
No 387
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=96.62 E-value=0.065 Score=53.84 Aligned_cols=89 Identities=17% Similarity=0.093 Sum_probs=54.3
Q ss_pred HHHHHHHhh-------cCCcEEEEcC--CCC-C----CccCHHHHHHHHHHcCCEEEEEccccccccccC-C---CCCCC
Q 022564 185 DQLEKSATL-------FRPKLIVAGA--SAY-A----RLYDYERIRKVCNKQKAIMLADMAHISGLVAAG-V---IPSPF 246 (295)
Q Consensus 185 e~l~~~i~~-------~~tk~i~l~~--~n~-~----~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~-~---~~~~~ 246 (295)
+.+++.++. .++.++++-+ ... | ...-++.|.++|++||+++|.|+.+. |.-..+ . ...+.
T Consensus 567 ~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~T-GfGRtG~~fa~e~~gv 645 (817)
T PLN02974 567 SYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFT-GLWRLGVESAWELLGC 645 (817)
T ss_pred HHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeeccc-CCCcccchhhHHhcCC
Confidence 556666642 2466777753 232 3 22337899999999999999999964 321111 1 11110
Q ss_pred CcceEEEeCCCCCCCCC--ceEEEEEeCCchhh
Q 022564 247 EYADVVTTTTHKSLRGP--RGAMIFFRKGVKEI 277 (295)
Q Consensus 247 ~~~D~~~~s~~K~l~gp--~gG~l~~~~~~~~~ 277 (295)
..|++++ .|.++|. +-|.+++++++.+.
T Consensus 646 -~PDIi~~--gKgLtgG~~Plaa~l~~~~I~~~ 675 (817)
T PLN02974 646 -KPDIACY--AKLLTGGLVPLAATLATEEVFEA 675 (817)
T ss_pred -CCCEEee--cccccCCCCccEEEEEcHHHHHh
Confidence 2678775 4877654 33777788776554
No 388
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=96.40 E-value=0.0041 Score=54.98 Aligned_cols=154 Identities=14% Similarity=0.019 Sum_probs=73.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhhcCC----C--CeEEEecCCCCcccCccccccccccc
Q 022564 90 IDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKP----H--DRIMALDLPHGGHLSHGYQTDTKKIS 162 (295)
Q Consensus 90 ~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al~~~----g--d~Vl~~~~~~~~~~~~~~~~~~~~~~ 162 (295)
..+|++.+|+.-...-++..+.. -|++++|++ ++.+++.+|... + -.|+... |.|+.|+....
T Consensus 45 s~eL~~~Ir~LH~~VGNAvt~gr--~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~a--------PYY~~Y~~qt~ 114 (363)
T PF04864_consen 45 SPELERQIRRLHRVVGNAVTDGR--YIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAA--------PYYSSYPEQTD 114 (363)
T ss_dssp -HHHHHHHHHHHHHH-SB--TTS--EEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-S--------S--CHHHHHCC
T ss_pred cHHHHHHHHHHHHHhccccccCc--EEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecC--------CCccchHHHHH
Confidence 35677666655554444433322 799999999 777788888422 1 2577766 44444433222
Q ss_pred ccee-eeEEEeeecCCCCCCCCHHHHHHHHhh-cCCcEE-EEcCCCCCCccCHHHHHHHHHHcCCEEEEEcccccccccc
Q 022564 163 AVSI-FFETMPYRLNESTGYIDYDQLEKSATL-FRPKLI-VAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAA 239 (295)
Q Consensus 163 ~~g~-~~~~v~~~~~~~~~~id~e~l~~~i~~-~~tk~i-~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~ 239 (295)
+..- .++. .-|...+. .. .....| ++++||||--.--+ .+++.-+..+|.|-|.+-...-.
T Consensus 115 ~f~s~~y~w---~Gda~~~~----------~~~~~~~~IElVTSPNNPDG~lr~---~V~~g~~~k~I~D~AYYWPhyTp 178 (363)
T PF04864_consen 115 FFDSRLYKW---AGDASNFK----------NSDNPSPYIELVTSPNNPDGQLRE---AVLNGSSGKVIHDLAYYWPHYTP 178 (363)
T ss_dssp CT-BTTEEE---EEECCCGT----------T-S-CCGEEEEEESS-TTT---------SSTTTEEEEEEE-TT-STTTS-
T ss_pred hccccCccc---cccHHhhc----------cCCCCCCeEEEEeCCCCCcccccc---hhcCCCCcceeeeeeeecccccc
Confidence 2210 0111 11111111 11 022344 56888887211011 12344456789999976443321
Q ss_pred CCCCCCCCcceEEEeCCCCCCCCCce---EEEEEeCC
Q 022564 240 GVIPSPFEYADVVTTTTHKSLRGPRG---AMIFFRKG 273 (295)
Q Consensus 240 ~~~~~~~~~~D~~~~s~~K~l~gp~g---G~l~~~~~ 273 (295)
-..+. .-|++.++.+| +.|..| |..+++++
T Consensus 179 I~~~a---D~DiMLFT~SK-~TGHAGSR~GWAlVKD~ 211 (363)
T PF04864_consen 179 ITAPA---DHDIMLFTLSK-LTGHAGSRFGWALVKDE 211 (363)
T ss_dssp --S-B-----SEEEEEHHH-HCS-GGG-EEEEEES-H
T ss_pred cCCCC---CCceEEEEEec-ccCccccccceeeecCH
Confidence 11111 26799999999 567777 99999886
No 389
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=96.31 E-value=0.0042 Score=52.85 Aligned_cols=184 Identities=13% Similarity=0.104 Sum_probs=98.7
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhh--cCCCCe-EEEecCCCCcccCccccccccccccce
Q 022564 89 YIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTAL--LKPHDR-IMALDLPHGGHLSHGYQTDTKKISAVS 165 (295)
Q Consensus 89 ~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al--~~~gd~-Vl~~~~~~~~~~~~~~~~~~~~~~~~g 165 (295)
.+..+..+.....-.+.|+..-.-+.-|-..+|.+.-+ .+..+ -+|..+ |+-+..+..+.+...+ -+|
T Consensus 54 ll~~isne~a~~~i~l~glhav~nc~vvpl~tgmslsl-c~~s~r~krpkakyiiw~ridqks~~ksi~--------~ag 124 (432)
T KOG3843|consen 54 LLACISNEFAKDAIHLAGLHAVANCFVVPLATGMSLSL-CFLSLRHKRPKAKYIIWLRIDQKSCFKSII--------HAG 124 (432)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhceeEEeccccccHHH-HHHHHhhcCCcccEEEEEecchHHHHHHHH--------hcC
Confidence 33444444444555566652211001233345555433 55555 235444 4434444433332222 234
Q ss_pred eeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEE-Ec--CCCC-C-CccCHHHHHHHHHHcCCEEEEEcccccccccc-
Q 022564 166 IFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIV-AG--ASAY-A-RLYDYERIRKVCNKQKAIMLADMAHISGLVAA- 239 (295)
Q Consensus 166 ~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~-l~--~~n~-~-~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~- 239 (295)
.+..++.--.+.+...-|++.+++.+++.....|+ +. .+.+ | ....+++|+.||..|+++-++..|++.-.-..
T Consensus 125 fepiiie~i~d~d~l~tdleav~~~iee~g~dcilci~sttscfapr~pd~leaiaaica~~diphivnnayglqsee~i 204 (432)
T KOG3843|consen 125 FEPIIIENILDGDELITDLEAVEAIIEELGEDCILCIHSTTSCFAPRSPDNLEAIAAICAAHDIPHIVNNAYGLQSEECI 204 (432)
T ss_pred CCceeeeccccchHHHHhHHHHHHHHHHhCCceEEEEeecccccCCCCCchHHHHHHHHHccCchhhhccccccchHHHH
Confidence 33333321133233466999999999875566443 32 3333 3 67789999999999999999999854322110
Q ss_pred -CC-CCCCCCcceEEEeCCCCCCCCCceEEEEE--eCCchhhhccC
Q 022564 240 -GV-IPSPFEYADVVTTTTHKSLRGPRGAMIFF--RKGVKEINKQG 281 (295)
Q Consensus 240 -~~-~~~~~~~~D~~~~s~~K~l~gp~gG~l~~--~~~~~~~~~~~ 281 (295)
.+ ....-..+|.++-|..|+|..|.||.++. ++.+.+.+.+.
T Consensus 205 ~~iaa~~~~grida~vqsldknf~vpvggaiia~fk~n~iq~iak~ 250 (432)
T KOG3843|consen 205 HKIAAAAECGRIDAFVQSLDKNFMVPVGGAIIAAFKDNFIQEIAKM 250 (432)
T ss_pred HHHHHHhhhccHHHHHHHhhhcceeecchhHhhHhHHHHHHHHHHh
Confidence 00 00011138999999999999999965543 34444444443
No 390
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=96.16 E-value=0.095 Score=50.19 Aligned_cols=155 Identities=12% Similarity=0.157 Sum_probs=90.9
Q ss_pred HHHHHHHHcCCCCCCcceeEEeCCChHHHHH-HHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeec
Q 022564 97 CQKRALEAFRLDPEKWGVNVQSLSGSPSNFQ-VYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL 175 (295)
Q Consensus 97 ~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~-~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 175 (295)
.+..++++.|++-.. .=.+--|+.|-.+ ++..-.+++.+.++....|+..++.... -+.-.| +++.
T Consensus 168 yQTmi~dlTGL~~aN---ASLLDEgTAaaEAm~l~~~~~krkk~vvd~~~hpqtlsV~~T----Ra~~~~--i~v~---- 234 (1001)
T KOG2040|consen 168 YQTMITDLTGLPMAN---ASLLDEGTAAAEAMALCNRINKRKKFVVDSNCHPQTLSVVKT----RAKGFG--IKVV---- 234 (1001)
T ss_pred hHHhhhhccCCcccc---hhhhccchhHHHHHHHHHhhcccceEEecCCCCcchhhhhhc----cccccc--eeEE----
Confidence 557788888986541 1233345553333 3333367778888888888887664431 111122 1111
Q ss_pred CCCCCCCCHHHHHHHHhhcCCcEEEEcCCCC-CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCC-cceEEE
Q 022564 176 NESTGYIDYDQLEKSATLFRPKLIVAGASAY-ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE-YADVVT 253 (295)
Q Consensus 176 ~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~-~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~-~~D~~~ 253 (295)
..|+++..... + +...+++.+|+. |.+.+..++++.+++.+..+++-. ..+..-+...|-. |+|+++
T Consensus 235 -----~~~~~~~~~s~-~-~v~gvlvQYP~t~G~i~d~~el~~~a~~~~s~vv~at----DLLaLtiLrpPgefGaDIav 303 (1001)
T KOG2040|consen 235 -----VSDIKEADYSS-K-DVSGVLVQYPDTEGSVLDFDELVELAHANGSLVVMAT----DLLALTILRPPGEFGADIAV 303 (1001)
T ss_pred -----ecCHHHhhccc-c-ceeEEEEEcCCCCCcccCHHHHHHHhhccCceEEEee----hhhHHHccCChhhcCceeee
Confidence 11333332211 2 566777776666 799999999999999998766422 1222222222322 699999
Q ss_pred eCCCC-----CCCCCceEEEEEeCCch
Q 022564 254 TTTHK-----SLRGPRGAMIFFRKGVK 275 (295)
Q Consensus 254 ~s~~K-----~l~gp~gG~l~~~~~~~ 275 (295)
+|... ..+||..||+.+++++.
T Consensus 304 GSsQRFGVPlGYGGPHAaFfAv~~~l~ 330 (1001)
T KOG2040|consen 304 GSSQRFGVPLGYGGPHAAFFAVSESLV 330 (1001)
T ss_pred ccccccCccccCCCchHHHHHHHHHHH
Confidence 99998 22456667777776553
No 391
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=96.16 E-value=0.037 Score=49.74 Aligned_cols=64 Identities=20% Similarity=0.265 Sum_probs=44.0
Q ss_pred HHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCc----ceEEEeCCCCCCCCCce-EEEEEeCCchhhhc
Q 022564 212 YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEY----ADVVTTTTHKSLRGPRG-AMIFFRKGVKEINK 279 (295)
Q Consensus 212 l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~----~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~~~ 279 (295)
+++..++|+++|.++|.|++|. |.-..+ .-++++. .|++ +..|.+++..- |.+++.+++.++..
T Consensus 235 lka~~~~v~k~Ggl~IaDEVqt-GfGRtG-~~wgfe~h~v~PDIv--TmAKgiGnG~Pl~AVvtt~EIa~v~~ 303 (442)
T KOG1404|consen 235 LKAAYKVVRKRGGLFIADEVQT-GFGRTG-HMWGFESHGVVPDIV--TMAKGIGNGFPLGAVVTTPEIADVLN 303 (442)
T ss_pred HHHHHHHHHHcCCEEEehhhhh-cccccc-ccccccccCCCccHH--HHHhhccCCCcceeeecCHHHHHHHH
Confidence 7899999999999999999985 222222 3333332 4444 45688865444 88888888877643
No 392
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=96.06 E-value=0.14 Score=45.51 Aligned_cols=196 Identities=18% Similarity=0.186 Sum_probs=111.1
Q ss_pred cCceecCC-------CCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCC----CCccee
Q 022564 47 KGLELIPS-------ENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDP----EKWGVN 115 (295)
Q Consensus 47 ~~i~L~~~-------~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~----~~~~~~ 115 (295)
..|||..| .+++-+.|++|-.+.+..... .-|-+-.++.++.....+. .+|.+. +..-+.
T Consensus 53 ~KiNLgvGaYRdd~gKp~vL~~VrkAE~ql~~~~ld------KEYlpI~Gl~eF~k~sakL---a~G~~s~~ik~~Ri~t 123 (427)
T KOG1411|consen 53 KKINLGVGAYRDDNGKPYVLPSVRKAEQQLASLSLD------KEYLPITGLAEFNKLSAKL---ALGDNSPVIKEKRIVT 123 (427)
T ss_pred ceeeecccceecCCCCeeeeHHHHHHHHHHhhhccc------chhccccchHHHHHHHHHH---hhcCCchhhhccceeE
Confidence 55888655 345677888776655442111 1133334555665433322 244311 111123
Q ss_pred EEeCCChHH--HHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhh
Q 022564 116 VQSLSGSPS--NFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL 193 (295)
Q Consensus 116 v~~~sG~~a--~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~ 193 (295)
+..-||+-+ +-+-+.+..-++..|.+++|..+.|.. .-..+|..++...+ .++.+..+|++-+.+.+.+
T Consensus 124 vQ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~~--------if~~ag~~~~~yrY-yd~~t~gld~~g~ledl~~ 194 (427)
T KOG1411|consen 124 VQTLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNHKN--------IFKDAGLPVKFYRY-YDPKTRGLDFKGMLEDLGE 194 (427)
T ss_pred EEeccCcchhhHHHHHHHhhccccceeecCCcccccCc--------cccccCcceeeeee-ccccccccchHHHHHHHhc
Confidence 444556553 333444545678899999976666543 22355655555554 4556788999988777764
Q ss_pred cCC-cEEEE--cCCCCC----CccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCC--C-----Ccce-EEEeCCCC
Q 022564 194 FRP-KLIVA--GASAYA----RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP--F-----EYAD-VVTTTTHK 258 (295)
Q Consensus 194 ~~t-k~i~l--~~~n~~----~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~--~-----~~~D-~~~~s~~K 258 (295)
... ..|++ |.+|++ +...-++|.++.++.+.+-+.|.|. -|.-..++.... + .|.+ +++-|.-|
T Consensus 195 ~p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAY-QGfaSG~~d~DA~avR~F~~~g~~~~laQSyAK 273 (427)
T KOG1411|consen 195 APEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAY-QGFASGDLDKDAQAVRLFVEDGHEILLAQSYAK 273 (427)
T ss_pred CCCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhh-cccccCCchhhHHHHHHHHHcCCceEeehhhhh
Confidence 212 34444 466663 4445678999999999999999983 343333322111 0 1233 66888899
Q ss_pred CCC
Q 022564 259 SLR 261 (295)
Q Consensus 259 ~l~ 261 (295)
+++
T Consensus 274 NMG 276 (427)
T KOG1411|consen 274 NMG 276 (427)
T ss_pred hcc
Confidence 874
No 393
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=95.41 E-value=0.12 Score=45.20 Aligned_cols=143 Identities=15% Similarity=0.151 Sum_probs=82.5
Q ss_pred eEEeCCChHHHHH---HHHhhcCCCCeEEEecCCCCcccCccccccccccccce-eeeEEEeeecCCCCCCCCHHHHHHH
Q 022564 115 NVQSLSGSPSNFQ---VYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVS-IFFETMPYRLNESTGYIDYDQLEKS 190 (295)
Q Consensus 115 ~v~~~sG~~a~~~---~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~v~~~~~~~~~~id~e~l~~~ 190 (295)
.|...||+.|+.. .+..++ +...|.++.|....|...+. -+| ..+...++ ++.++-.+|++-+...
T Consensus 102 ~vQslsGTGAl~~~A~Fl~~~~-~~~~VY~SnPTW~nH~~if~--------~aGf~tv~~Y~y-Wd~~~k~~d~e~~Lsd 171 (410)
T KOG1412|consen 102 GVQSLSGTGALRIAADFLATFY-NKNTVYVSNPTWENHHAIFE--------KAGFTTVATYPY-WDAENKCVDLEGFLSD 171 (410)
T ss_pred ceeeccccchhhhhHHHHHHhc-ccceeEecCCchhHHHHHHH--------HcCCceeeeeee-ecCCCceecHHHHHHH
Confidence 3455566654432 222333 45668888866666543222 233 12333333 5556678999999998
Q ss_pred HhhcCCcEE-EE--cCCCCCCccC----HHHHHHHHHHcCCEEEEEccccccccccCCCCCC--C-----Ccc-eEEEeC
Q 022564 191 ATLFRPKLI-VA--GASAYARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP--F-----EYA-DVVTTT 255 (295)
Q Consensus 191 i~~~~tk~i-~l--~~~n~~~~~~----l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~--~-----~~~-D~~~~s 255 (295)
++....+.| ++ |..|++.+.| -..|++..++.+.+.+.|.| +-|....+..... + .|. =+++-|
T Consensus 172 l~~APe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiA-YQGfASGD~~~DawAiR~fV~~g~e~fv~QS 250 (410)
T KOG1412|consen 172 LESAPEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIA-YQGFASGDLDADAWAIRYFVEQGFELFVCQS 250 (410)
T ss_pred HhhCCCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehh-hcccccCCccccHHHHHHHHhcCCeEEEEhh
Confidence 876223333 33 4566644444 44788888999999999998 3454444432211 1 022 277899
Q ss_pred CCCCCC--CCceEEE
Q 022564 256 THKSLR--GPRGAMI 268 (295)
Q Consensus 256 ~~K~l~--gp~gG~l 268 (295)
+.|+|+ +++-|-+
T Consensus 251 FaKNfGlYneRvGnl 265 (410)
T KOG1412|consen 251 FAKNFGLYNERVGNL 265 (410)
T ss_pred hhhhcccccccccce
Confidence 999885 4554544
No 394
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=94.60 E-value=0.09 Score=46.80 Aligned_cols=73 Identities=16% Similarity=0.232 Sum_probs=47.4
Q ss_pred CHHHHHHHHhhc----CC-cEEEEc------CCCCCCccCHHHHHHHHHHcCCEEEEEccccccccccCC---CCCCCC-
Q 022564 183 DYDQLEKSATLF----RP-KLIVAG------ASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGV---IPSPFE- 247 (295)
Q Consensus 183 d~e~l~~~i~~~----~t-k~i~l~------~~n~~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~---~~~~~~- 247 (295)
-++++|++|.+. ++ .++++- .-|..+..-++.|.+++++|++.+|+|+.|..|-.-..+ +.+.+.
T Consensus 254 Cl~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~ 333 (484)
T KOG1405|consen 254 CLAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDS 333 (484)
T ss_pred HHHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCC
Confidence 356677777532 13 455552 334457777999999999999999999999755433322 122222
Q ss_pred cceEEEeC
Q 022564 248 YADVVTTT 255 (295)
Q Consensus 248 ~~D~~~~s 255 (295)
-.|++++|
T Consensus 334 PpD~vTFS 341 (484)
T KOG1405|consen 334 PPDVVTFS 341 (484)
T ss_pred Cccceehh
Confidence 28888776
No 395
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=93.90 E-value=0.49 Score=41.39 Aligned_cols=203 Identities=17% Similarity=0.176 Sum_probs=99.6
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhh--cCC
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTAL--LKP 135 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al--~~~ 135 (295)
..|+|.+|....+... ....++ ..+++.+-+++..+.+-+++ +..+..||+.|+..+++-. ...
T Consensus 62 chp~VV~A~~kQmat~----~tN~RF-----lhd~lv~cA~~l~stlPeLs-----vc~F~NSGSEANDLALRLAR~ftk 127 (452)
T KOG1403|consen 62 CHPEVVRAGAKQMATI----STNNRF-----LHDELVQCARTLTSTLPELS-----VCFFVNSGSEANDLALRLARNFTK 127 (452)
T ss_pred CCHHHHHHHHHHHhHh----cccchh-----hHHHHHHHHHHHhhcCCCce-----EEEEecCCchhhHHHHHHHHhhcc
Confidence 4788888887766441 111111 12445544444444444433 3566677777887555433 334
Q ss_pred CCeEEEecCCCCcccCcccc--ccc--cccccce-eeeEEEeeecC------------CCCCCCCHHHHHHHHhhc--C-
Q 022564 136 HDRIMALDLPHGGHLSHGYQ--TDT--KKISAVS-IFFETMPYRLN------------ESTGYIDYDQLEKSATLF--R- 195 (295)
Q Consensus 136 gd~Vl~~~~~~~~~~~~~~~--~~~--~~~~~~g-~~~~~v~~~~~------------~~~~~id~e~l~~~i~~~--~- 195 (295)
..-|++.+..|.+|+....- .|+ ++-.... -.+.+-|.+-- .+.+..-.+.+++.+++. +
T Consensus 128 hqDvItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g 207 (452)
T KOG1403|consen 128 HQDVITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRDKMYPDADMGALYADPVKEICQDQLAKG 207 (452)
T ss_pred cCceEEEechhccceeeeeeccceeccCCCCcCCCceeEecCCccccccccccccCCcccchhhhhhHHHHHHHHHHhcC
Confidence 44577778888887643211 111 1111111 00111222100 000111234455555421 1
Q ss_pred --CcEEEE-c-CCCCCCccC----HHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCc----ceEEEeCCCCCCC-C
Q 022564 196 --PKLIVA-G-ASAYARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEY----ADVVTTTTHKSLR-G 262 (295)
Q Consensus 196 --tk~i~l-~-~~n~~~~~~----l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~----~D~~~~s~~K~l~-g 262 (295)
..+.+. + .+.-|.+.| .+++++..+.+|-+.|.|+.|. |.-..+.+-|.+.. .|++++ .|-++ |
T Consensus 208 ~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQv-GFGRvG~hyWafq~y~fiPDIVtm--gKpmGNG 284 (452)
T KOG1403|consen 208 QGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQV-GFGRVGSHYWAFQTYNFIPDIVTM--GKPMGNG 284 (452)
T ss_pred CcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhh-cccccchhhhhhhhhccccchhee--cccCCCC
Confidence 122222 1 233343333 5688888899999999999974 33222333333331 455544 46554 4
Q ss_pred CceEEEEEeCCchhh
Q 022564 263 PRGAMIFFRKGVKEI 277 (295)
Q Consensus 263 p~gG~l~~~~~~~~~ 277 (295)
.+-+.+.+.+++.+.
T Consensus 285 hPVa~VattkeIA~A 299 (452)
T KOG1403|consen 285 HPVAAVATTKEIAQA 299 (452)
T ss_pred CeeeEEeccHHHHHH
Confidence 444888888887653
No 396
>PLN02672 methionine S-methyltransferase
Probab=83.21 E-value=21 Score=37.36 Aligned_cols=203 Identities=12% Similarity=0.080 Sum_probs=101.3
Q ss_pred hcccCCCcchhccCc---c--cccCHHHHHHHHHHHHHHHcCceecCCCCCCCHH---HHHHHhhhhhccCCCCCCCCcc
Q 022564 12 KEKNGVTWPKQLNAP---L--EVVDPEIADIIEHEKARQWKGLELIPSENFTSVS---VMQAVGSVMTNKYSEGYPGARY 83 (295)
Q Consensus 12 ~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~i~L~~~~~~~~~~---v~~al~~~l~~~~~~g~~~~~~ 83 (295)
-++.++++++-++-. | .+.-..++..+..-+......++|.-.+...+++ ....+...+.+.- -.|
T Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---- 421 (1082)
T PLN02672 348 YGKAGGRISHALSVYSCQLRQPNQVKTIFKFLKNGFHEVSGSLDLSFEDESVADEKIPFLAYLASALKGLS--YFP---- 421 (1082)
T ss_pred HHhcCCccchhhhhhhhhhcCchHHHHHHHHHHccchhhhhhccccccccccchhhccHHHHHHHHHccCC--CCC----
Confidence 366777777766422 2 2222333333332222223567776444444333 2344555555421 112
Q ss_pred cCCcchHHHHHHHHHHHHHHHcCC--CCCCcceeEEeCCChH-HHHHHHH------hhcCCCCeEEEecCCCCcccCccc
Q 022564 84 YGGNEYIDMAESLCQKRALEAFRL--DPEKWGVNVQSLSGSP-SNFQVYT------ALLKPHDRIMALDLPHGGHLSHGY 154 (295)
Q Consensus 84 ~~~~~~~~~l~~~~~~~la~~~g~--~~~~~~~~v~~~sG~~-a~~~~~~------al~~~gd~Vl~~~~~~~~~~~~~~ 154 (295)
|....+...+++.+...+..+++. .++ +|++...-. |+..+++ ++++.+.....+. .++....
T Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 493 (1082)
T PLN02672 422 CEPPAGSKRFRNLIAGFMRIYHHIPLTPD----NVVVFPSRAVAIENALRLFSPRLAIVDEHLTRWLPK----KWLTSLA 493 (1082)
T ss_pred CCCCccchHHHHHHHHHHHHhcCCcCCcc----ceEEeccHHHHHHHHHHhhChHHHhhhhhhhccCCH----HHHhHhh
Confidence 223344466777788899999987 444 555555544 7654443 3334442222111 0000000
Q ss_pred cccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCC--CCccCHHHHHHHHHHcCCEEEEEccc
Q 022564 155 QTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY--ARLYDYERIRKVCNKQKAIMLADMAH 232 (295)
Q Consensus 155 ~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~ 232 (295)
........-.+..+.++.-+ .+- +.+.++++..++++|+.+.-.+ -+..-++.|.+.+++.|++++.|.+.
T Consensus 494 ~~~~~~~~~~~~~~~~~~~~-----~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (1082)
T PLN02672 494 IENATSDSKSDDVITVIEAP-----RQS--DLVIELIKKLKPQVVVTGMADFEMRTSTAFEHLLNVTAEIGARLFLDISD 566 (1082)
T ss_pred hhcccccCccCCeEEEEeCC-----Ccc--hHHHHHHHhCCCeEEEEeccchhhhhHHHHHHHHHHHHhhCcEEEEehhh
Confidence 00000111111112222211 111 3566677777889888763333 24445788999999999999999985
Q ss_pred ccc
Q 022564 233 ISG 235 (295)
Q Consensus 233 ~~g 235 (295)
.+.
T Consensus 567 ~~~ 569 (1082)
T PLN02672 567 HLE 569 (1082)
T ss_pred hee
Confidence 543
No 397
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=80.10 E-value=6.8 Score=35.92 Aligned_cols=49 Identities=14% Similarity=0.093 Sum_probs=36.5
Q ss_pred CHHHHHHHHhh--cCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEcc
Q 022564 183 DYDQLEKSATL--FRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 183 d~e~l~~~i~~--~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
+...|.+.++. .+.++++++.-+-|...+.+.+.++|++.|+++++|-=
T Consensus 129 ~~~~ll~~~~~~l~~~~~vVLSDY~KG~L~~~q~~I~~ar~~~~pVLvDPK 179 (467)
T COG2870 129 DENKLLEKIKNALKSFDALVLSDYAKGVLTNVQKMIDLAREAGIPVLVDPK 179 (467)
T ss_pred hHHHHHHHHHHHhhcCCEEEEeccccccchhHHHHHHHHHHcCCcEEECCC
Confidence 34444444432 25788888765667888899999999999999999964
No 398
>PRK09375 quinolinate synthetase; Provisional
Probab=78.72 E-value=24 Score=31.50 Aligned_cols=109 Identities=14% Similarity=0.206 Sum_probs=59.6
Q ss_pred HHHHHHHHHHHHHHHcCceecCCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCC
Q 022564 32 PEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEK 111 (295)
Q Consensus 32 ~~~~~~~~~~~~~~~~~i~L~~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~ 111 (295)
..+.+.+.+. .++++.+-| +.++..+++ +.+.++..+ .|+ +.+..++ .+.
T Consensus 19 ~~~~~~I~~l-k~e~~a~IL--aH~Yq~~ei-q~~AD~~GD-------------------Sl~--Ls~~A~~---~~a-- 68 (319)
T PRK09375 19 ADLKERIKRL-KKERNAVIL--AHYYQRPEI-QDLADFTGD-------------------SLE--LARFAAE---TDA-- 68 (319)
T ss_pred HHHHHHHHHH-HHhcCcEEE--EecCCCHHH-HHHHHhhcc-------------------HHH--HHHHHHh---CCC--
Confidence 3444445443 233355555 778888988 445554433 122 2233332 344
Q ss_pred cceeEEeCCChH--HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHH
Q 022564 112 WGVNVQSLSGSP--SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEK 189 (295)
Q Consensus 112 ~~~~v~~~sG~~--a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~ 189 (295)
.+++..|.. |-. ..+++|+.+|++|++ .. ++.++ ..++.+++++
T Consensus 69 ---~~IvfcGV~FMaEt---AkIL~p~k~VllP~~--------~A-----gC~mA---------------d~~~~~~i~~ 114 (319)
T PRK09375 69 ---DTIVFCGVHFMAET---AKILSPEKTVLLPDL--------EA-----GCSLA---------------DMCPAEEFRA 114 (319)
T ss_pred ---CEEEEecceehhhh---HHhcCCCCeEECCCC--------CC-----CCccc---------------ccCCHHHHHH
Confidence 344447877 554 366789999999883 11 11111 2456777777
Q ss_pred HHhhcCCcEEEEcCCC
Q 022564 190 SATLFRPKLIVAGASA 205 (295)
Q Consensus 190 ~i~~~~tk~i~l~~~n 205 (295)
..++ .+.++++++.|
T Consensus 115 lk~~-~p~a~vVaYvN 129 (319)
T PRK09375 115 FKEA-HPDATVVTYVN 129 (319)
T ss_pred HHHH-CCCCEEEEEeC
Confidence 6665 55666665443
No 399
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=75.07 E-value=11 Score=34.04 Aligned_cols=59 Identities=17% Similarity=0.173 Sum_probs=41.9
Q ss_pred CCCHHHHHHHHhh----cCCcEEEE-c-----CCCCC-CccCHHHHHHHHHHcCCEEEEEcccccccccc
Q 022564 181 YIDYDQLEKSATL----FRPKLIVA-G-----ASAYA-RLYDYERIRKVCNKQKAIMLADMAHISGLVAA 239 (295)
Q Consensus 181 ~id~e~l~~~i~~----~~tk~i~l-~-----~~n~~-~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~ 239 (295)
..+++++..+++. .+.+++++ + .+.++ ...|+..|..+-+..+++||+|.+|+.|....
T Consensus 218 ~~t~ee~~~A~e~i~~~Gn~~viL~erG~rtf~s~y~~~~~dl~ai~~lk~~~~lPVi~DpsH~~G~sd~ 287 (352)
T PRK13396 218 AATIDEWLMAAEYILAAGNPNVILCERGIRTFDRQYTRNTLDLSVIPVLRSLTHLPIMIDPSHGTGKSEY 287 (352)
T ss_pred CCCHHHHHHHHHHHHHcCCCeEEEEecCCccCcCCCCCCCcCHHHHHHHHHhhCCCEEECCcccCCcHHH
Confidence 4488888776642 24456665 3 22344 67789999999777799999999999885543
No 400
>COG1504 Uncharacterized conserved protein [Function unknown]
Probab=72.91 E-value=11 Score=27.81 Aligned_cols=49 Identities=20% Similarity=0.228 Sum_probs=40.3
Q ss_pred CCCCHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEE
Q 022564 180 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (295)
Q Consensus 180 ~~id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD 229 (295)
..++++++++.+.+ ++..|+++....|.+.-.++-.+++++.++-|++-
T Consensus 47 Hkl~~eEle~~lee-~~E~ivvGTG~~G~l~l~~ea~e~~r~k~~~vi~~ 95 (121)
T COG1504 47 HKLALEELEELLEE-GPEVIVVGTGQSGMLELSEEAREFFRKKGCEVIEL 95 (121)
T ss_pred cccCHHHHHHHHhc-CCcEEEEecCceeEEEeCHHHHHHHHhcCCeEEEe
Confidence 47899999999987 89999998666776776778889999999766653
No 401
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=72.37 E-value=16 Score=32.40 Aligned_cols=55 Identities=16% Similarity=0.115 Sum_probs=39.3
Q ss_pred CCCCCHHHHHHHHhh-----cCCcEEEEcCCCCC--CccCHHHHHHHHHHcCCEEEEEcccc
Q 022564 179 TGYIDYDQLEKSATL-----FRPKLIVAGASAYA--RLYDYERIRKVCNKQKAIMLADMAHI 233 (295)
Q Consensus 179 ~~~id~e~l~~~i~~-----~~tk~i~l~~~n~~--~~~~l~~I~~ia~~~~~~vivD~a~~ 233 (295)
.-.++.+++++.++. .+-.+|+++.|-++ ....+.+|.++|++.|+.+++|.+..
T Consensus 108 Gp~is~~~~~~~l~~~~~~l~~~d~VvlsGSlP~g~~~d~y~~li~~~~~~g~~vilD~Sg~ 169 (310)
T COG1105 108 GPEISEAELEQFLEQLKALLESDDIVVLSGSLPPGVPPDAYAELIRILRQQGAKVILDTSGE 169 (310)
T ss_pred CCCCCHHHHHHHHHHHHHhcccCCEEEEeCCCCCCCCHHHHHHHHHHHHhcCCeEEEECChH
Confidence 346777777665542 13456777755553 45568899999999999999999854
No 402
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=68.94 E-value=23 Score=30.46 Aligned_cols=56 Identities=16% Similarity=0.333 Sum_probs=41.1
Q ss_pred CCCHHHHHHHHhh----cCCcEEEE--cCCCCC---C-ccCHHHHHHHHHHcCCEEEEEccccccc
Q 022564 181 YIDYDQLEKSATL----FRPKLIVA--GASAYA---R-LYDYERIRKVCNKQKAIMLADMAHISGL 236 (295)
Q Consensus 181 ~id~e~l~~~i~~----~~tk~i~l--~~~n~~---~-~~~l~~I~~ia~~~~~~vivD~a~~~g~ 236 (295)
..++++++.+++. -+.+++++ |.+.|+ . ..++..|..+.+..+++|++|.+|+.|.
T Consensus 132 ~~t~~e~~~A~e~i~~~Gn~~i~L~eRg~~~Y~~~~~n~~dl~ai~~lk~~~~lPVivd~SHs~G~ 197 (250)
T PRK13397 132 MATIEEYLGALSYLQDTGKSNIILCERGVRGYDVETRNMLDIMAVPIIQQKTDLPIIVDVSHSTGR 197 (250)
T ss_pred CCCHHHHHHHHHHHHHcCCCeEEEEccccCCCCCccccccCHHHHHHHHHHhCCCeEECCCCCCcc
Confidence 6788888777642 13466666 344443 2 6788888888888999999999999875
No 403
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=67.89 E-value=20 Score=26.64 Aligned_cols=52 Identities=8% Similarity=-0.037 Sum_probs=38.4
Q ss_pred CCCHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHc---CCEEEEEccc
Q 022564 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQ---KAIMLADMAH 232 (295)
Q Consensus 181 ~id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~---~~~vivD~a~ 232 (295)
....+++.+.+.+.++.+|.++.++......+.++.+.+++. ++.+++=+.+
T Consensus 36 ~~~~~~l~~~~~~~~pdvV~iS~~~~~~~~~~~~~i~~l~~~~~~~~~i~vGG~~ 90 (119)
T cd02067 36 DVPPEEIVEAAKEEDADAIGLSGLLTTHMTLMKEVIEELKEAGLDDIPVLVGGAI 90 (119)
T ss_pred CCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHcCCCCCeEEEECCC
Confidence 356778888777778999999876666667788888888876 4566665553
No 404
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=67.10 E-value=21 Score=32.57 Aligned_cols=96 Identities=14% Similarity=0.153 Sum_probs=57.9
Q ss_pred CCC-CCHHHHHHHHhh----cCCcEEEE--cCCCCC----CccCHHHHHHHHHHcCCEEEEEcccccc---ccccCCCCC
Q 022564 179 TGY-IDYDQLEKSATL----FRPKLIVA--GASAYA----RLYDYERIRKVCNKQKAIMLADMAHISG---LVAAGVIPS 244 (295)
Q Consensus 179 ~~~-id~e~l~~~i~~----~~tk~i~l--~~~n~~----~~~~l~~I~~ia~~~~~~vivD~a~~~g---~~~~~~~~~ 244 (295)
++. .++++++.+++. .+.+++++ |.++++ ...++..|..+-++++++|++|..|+.| .+..-....
T Consensus 232 ~G~~~t~~e~~~Ave~i~~~Gn~~i~L~erg~s~yp~~~~~~ldl~~i~~lk~~~~~PV~~d~~Hs~G~r~~~~~~a~aA 311 (360)
T PRK12595 232 RGLSATIEEFIYAAEYIMSQGNGQIILCERGIRTYEKATRNTLDISAVPILKQETHLPVMVDVTHSTGRRDLLLPTAKAA 311 (360)
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCCEEEECCccCCCCCCCCCCcCHHHHHHHHHHhCCCEEEeCCCCCcchhhHHHHHHHH
Confidence 344 688888887642 14567766 445543 3458999998888899999999999987 321100000
Q ss_pred CCCcce--EEEeCCCCCCCCCceEEEEEeCCc
Q 022564 245 PFEYAD--VVTTTTHKSLRGPRGAMIFFRKGV 274 (295)
Q Consensus 245 ~~~~~D--~~~~s~~K~l~gp~gG~l~~~~~~ 274 (295)
-..|+| ++=..+++...||.+..-+..+++
T Consensus 312 va~GAdg~~iE~H~dp~~a~~D~~~sl~p~el 343 (360)
T PRK12595 312 LAIGADGVMAEVHPDPAVALSDSAQQMDIPEF 343 (360)
T ss_pred HHcCCCeEEEEecCCCCCCCCchhhhCCHHHH
Confidence 011477 333444666667666444444444
No 405
>cd05126 Mth938 Mth938 domain. Mth938 is a hypothetical protein encoded by the Methanobacterium thermoautotrophicum (Mth) genome. This protein crystallizes as a dimer, although it is monomeric in solution, with one disulfide bond in each monomer. The function of the protein has not been determined.
Probab=65.04 E-value=24 Score=26.47 Aligned_cols=50 Identities=16% Similarity=0.061 Sum_probs=37.7
Q ss_pred CCCHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEcc
Q 022564 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 181 ~id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
.++.+++++.+.. ++.+|+++.-..+....-.++.+..+++|+-+.+-.+
T Consensus 45 ~l~~~~l~~ll~~-~peivliGTG~~~~~~~~~~~~~~l~~~Gi~ve~m~T 94 (117)
T cd05126 45 GLQPEELEELLEE-GVEVIVIGTGQSGALKVPPETVEKLEKRGVEVLVLPT 94 (117)
T ss_pred cCCHHHHHHHHhc-CCCEEEEcCCCCccccCCHHHHHHHHhcCCEEEEcCh
Confidence 6789999999986 8999988744444444456777788899998877544
No 406
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=65.03 E-value=31 Score=26.63 Aligned_cols=51 Identities=10% Similarity=0.102 Sum_probs=36.8
Q ss_pred CCCHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHc---CCEEEEEcc
Q 022564 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQ---KAIMLADMA 231 (295)
Q Consensus 181 ~id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~---~~~vivD~a 231 (295)
.+.++++.+++.+.++.+|.++..+......++++.+.+++. ++.+++=++
T Consensus 40 ~vp~e~i~~~a~~~~~d~V~lS~~~~~~~~~~~~~~~~L~~~~~~~~~i~vGG~ 93 (137)
T PRK02261 40 MTSQEEFIDAAIETDADAILVSSLYGHGEIDCRGLREKCIEAGLGDILLYVGGN 93 (137)
T ss_pred CCCHHHHHHHHHHcCCCEEEEcCccccCHHHHHHHHHHHHhcCCCCCeEEEECC
Confidence 356788888887778999998866666666678888888777 555655443
No 407
>KOG0630 consensus Predicted pyridoxal-dependent decarboxylase [Amino acid transport and metabolism]
Probab=64.11 E-value=19 Score=34.06 Aligned_cols=94 Identities=17% Similarity=0.161 Sum_probs=62.4
Q ss_pred CCCCHHHHHHHHhh----cCCcEEEEc---CCCCCCccCHHHHHHHHHHcC-CEEEEEccccccccccCCCCCCCC----
Q 022564 180 GYIDYDQLEKSATL----FRPKLIVAG---ASAYARLYDYERIRKVCNKQK-AIMLADMAHISGLVAAGVIPSPFE---- 247 (295)
Q Consensus 180 ~~id~e~l~~~i~~----~~tk~i~l~---~~n~~~~~~l~~I~~ia~~~~-~~vivD~a~~~g~~~~~~~~~~~~---- 247 (295)
+++|.-.+++.+++ .++-+|++. .+-.|....+-+|.++|++|. .|++.-+ |+...+-.....+.+.
T Consensus 272 griDhh~feKiideDlaagkkPLilia~iGasi~GqnDmi~kildi~eahakfWLHasG-haiAALt~aepnnil~HV~e 350 (838)
T KOG0630|consen 272 GRIDHHLFEKIIDEDLAAGKKPLILIADIGASICGQNDMILKILDICEAHAKFWLHASG-HAIAALTCAEPNNILGHVEE 350 (838)
T ss_pred ccccHHHHHHHHHHHHhCCCCCeEEEEeccchhhcchHHHHHHHHHHHHhhheeEeecc-chhhheeecCcccchhHHHH
Confidence 48999999998864 245566663 333467788999999999997 6766543 4444333322222211
Q ss_pred cceEEEeCCCCCCCCCceEEEEEeCCc
Q 022564 248 YADVVTTTTHKSLRGPRGAMIFFRKGV 274 (295)
Q Consensus 248 ~~D~~~~s~~K~l~gp~gG~l~~~~~~ 274 (295)
..|.+.....-|++-|..-++..+..+
T Consensus 351 qldSMal~ialWLGiPSaPiV~LHRPl 377 (838)
T KOG0630|consen 351 QLDSMALNIALWLGIPSAPIVLLHRPL 377 (838)
T ss_pred HHhhccchhHHHhCCCCCceEEeeccc
Confidence 367788888889988887666666654
No 408
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=63.44 E-value=18 Score=26.74 Aligned_cols=53 Identities=13% Similarity=0.210 Sum_probs=39.8
Q ss_pred CCCHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHc--CCEEEEEcccc
Q 022564 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQ--KAIMLADMAHI 233 (295)
Q Consensus 181 ~id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~--~~~vivD~a~~ 233 (295)
..+.+++.+.+.+.++++|.++.+..+......++++.+|+. ++.+++=+.|.
T Consensus 37 ~~~~~~l~~~~~~~~pd~V~iS~~~~~~~~~~~~l~~~~k~~~p~~~iv~GG~~~ 91 (121)
T PF02310_consen 37 NVPPEELVEALRAERPDVVGISVSMTPNLPEAKRLARAIKERNPNIPIVVGGPHA 91 (121)
T ss_dssp SB-HHHHHHHHHHTTCSEEEEEESSSTHHHHHHHHHHHHHTTCTTSEEEEEESSS
T ss_pred CCCHHHHHHHHhcCCCcEEEEEccCcCcHHHHHHHHHHHHhcCCCCEEEEECCch
Confidence 345688888887778999988754555566678888888877 78999988864
No 409
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase. This model respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This model identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologs of this gene are not found in plants which rely solely on the aerobic cyclase.
Probab=62.30 E-value=28 Score=33.24 Aligned_cols=55 Identities=20% Similarity=0.237 Sum_probs=41.0
Q ss_pred CCCCCHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHc--CCEEEEEccccc
Q 022564 179 TGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQ--KAIMLADMAHIS 234 (295)
Q Consensus 179 ~~~id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~--~~~vivD~a~~~ 234 (295)
...++.+++.+.+.+.++.+|.++.. .+......++++.+++. ++.|++=+.|..
T Consensus 47 ~~~~~~~~~~~~l~~~~pdvVgis~~-t~~~~~a~~~~~~~k~~~P~~~iV~GG~h~t 103 (497)
T TIGR02026 47 TGPLTDEKLVERLRAHCPDLVLITAI-TPAIYIACETLKFARERLPNAIIVLGGIHPT 103 (497)
T ss_pred ccCCCHHHHHHHHHhcCcCEEEEecC-cccHHHHHHHHHHHHHHCCCCEEEEcCCCcC
Confidence 34567888988887768999988632 23444566888888887 999999888753
No 410
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=61.74 E-value=37 Score=29.40 Aligned_cols=55 Identities=11% Similarity=0.183 Sum_probs=40.2
Q ss_pred CCCHHHHHHHHhhc----CCcEEEE-c-CCCC-C---CccCHHHHHHHHHHcCCEEEEEcccccc
Q 022564 181 YIDYDQLEKSATLF----RPKLIVA-G-ASAY-A---RLYDYERIRKVCNKQKAIMLADMAHISG 235 (295)
Q Consensus 181 ~id~e~l~~~i~~~----~tk~i~l-~-~~n~-~---~~~~l~~I~~ia~~~~~~vivD~a~~~g 235 (295)
..++++++.+++.. +..++++ + .+.+ | ...++..|..+.+.++++|+.|..|+.|
T Consensus 142 ~~t~~e~~~Ave~i~~~Gn~~i~l~~rG~s~y~~~~~~~~dl~~i~~lk~~~~~pV~~ds~Hs~G 206 (260)
T TIGR01361 142 GNTIEEWLYAAEYILSSGNGNVILCERGIRTFEKATRNTLDLSAVPVLKKETHLPIIVDPSHAAG 206 (260)
T ss_pred CCCHHHHHHHHHHHHHcCCCcEEEEECCCCCCCCCCcCCcCHHHHHHHHHhhCCCEEEcCCCCCC
Confidence 34788888776421 3455555 3 5455 4 4678999999998889999999999877
No 411
>COG3010 NanE Putative N-acetylmannosamine-6-phosphate epimerase [Carbohydrate transport and metabolism]
Probab=61.60 E-value=20 Score=29.78 Aligned_cols=71 Identities=15% Similarity=0.106 Sum_probs=46.6
Q ss_pred CCCHHHHHHHHhhcCCcEEEEcCCCCCCcc-CHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCC
Q 022564 181 YIDYDQLEKSATLFRPKLIVAGASAYARLY-DYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTH 257 (295)
Q Consensus 181 ~id~e~l~~~i~~~~tk~i~l~~~n~~~~~-~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~ 257 (295)
.+.+++++++.+. ...+|-+..+.-+... +++++.+-.|..|.+++.|++..--.. ..+.. |+|++-++.+
T Consensus 85 TptlkeVd~L~~~-Ga~IIA~DaT~R~RP~~~~~~~i~~~k~~~~l~MAD~St~ee~l--~a~~~---G~D~IGTTLs 156 (229)
T COG3010 85 TPTLKEVDALAEA-GADIIAFDATDRPRPDGDLEELIARIKYPGQLAMADCSTFEEGL--NAHKL---GFDIIGTTLS 156 (229)
T ss_pred cccHHHHHHHHHC-CCcEEEeecccCCCCcchHHHHHHHhhcCCcEEEeccCCHHHHH--HHHHc---CCcEEecccc
Confidence 3457788887766 7777777644444333 899999998889999999998421111 11223 3888865443
No 412
>TIGR03586 PseI pseudaminic acid synthase.
Probab=60.45 E-value=28 Score=31.26 Aligned_cols=84 Identities=21% Similarity=0.254 Sum_probs=52.7
Q ss_pred CCCCCHHHHHHHHh---hc-CCcEEEE-cCCCCC---CccCHHHHHHHHHHcCCEE-EEEccccccccccCCCCCCCCcc
Q 022564 179 TGYIDYDQLEKSAT---LF-RPKLIVA-GASAYA---RLYDYERIRKVCNKQKAIM-LADMAHISGLVAAGVIPSPFEYA 249 (295)
Q Consensus 179 ~~~id~e~l~~~i~---~~-~tk~i~l-~~~n~~---~~~~l~~I~~ia~~~~~~v-ivD~a~~~g~~~~~~~~~~~~~~ 249 (295)
++.-++++++.+++ .. +.+++++ |.++|| ...+|..|..+.++++++| ++| |..|.... +.. -..|+
T Consensus 141 tG~~t~~Ei~~Av~~i~~~g~~~i~LlhC~s~YP~~~~~~nL~~i~~lk~~f~~pVG~SD--Ht~G~~~~-~aA-va~GA 216 (327)
T TIGR03586 141 TGIATLEEIQEAVEACREAGCKDLVLLKCTSSYPAPLEDANLRTIPDLAERFNVPVGLSD--HTLGILAP-VAA-VALGA 216 (327)
T ss_pred CCCCCHHHHHHHHHHHHHCCCCcEEEEecCCCCCCCcccCCHHHHHHHHHHhCCCEEeeC--CCCchHHH-HHH-HHcCC
Confidence 34457888887764 21 3356665 566665 5668999999999999998 888 77764221 000 00146
Q ss_pred eEE--EeCCCCCCCCCceE
Q 022564 250 DVV--TTTTHKSLRGPRGA 266 (295)
Q Consensus 250 D~~--~~s~~K~l~gp~gG 266 (295)
+++ -++..|.+.||..-
T Consensus 217 ~iIEkH~tld~~l~G~D~~ 235 (327)
T TIGR03586 217 CVIEKHFTLDRSDGGVDSA 235 (327)
T ss_pred CEEEeCCChhhcCCCCChh
Confidence 655 46666777666553
No 413
>PF04131 NanE: Putative N-acetylmannosamine-6-phosphate epimerase; InterPro: IPR007260 This family represents a putative ManNAc-6-P-to-GlcNAc-6P epimerase in the N-acetylmannosamine (ManNAc) utilization pathway found mainly in pathogenic bacteria for the reaction: N-acyl-D-glucosamine 6-phosphate = N-acyl-D-mannosamine 6-phosphate It is probably encoded by the yhcJ gene [].; GO: 0047465 N-acylglucosamine-6-phosphate 2-epimerase activity, 0006051 N-acetylmannosamine metabolic process; PDB: 1Y0E_B 3IGS_A 1YXY_A 3Q58_B.
Probab=58.24 E-value=46 Score=27.33 Aligned_cols=72 Identities=14% Similarity=0.176 Sum_probs=46.0
Q ss_pred CCCHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCC
Q 022564 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHK 258 (295)
Q Consensus 181 ~id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K 258 (295)
.+.++++.++++. ...+|-+..++-+...+++++.+-+|++..+++.|++...-... .... |+|++....+=
T Consensus 51 TPT~~ev~~l~~a-GadIIAlDaT~R~Rp~~l~~li~~i~~~~~l~MADist~ee~~~--A~~~---G~D~I~TTLsG 122 (192)
T PF04131_consen 51 TPTLKEVDALAEA-GADIIALDATDRPRPETLEELIREIKEKYQLVMADISTLEEAIN--AAEL---GFDIIGTTLSG 122 (192)
T ss_dssp S-SHHHHHHHHHC-T-SEEEEE-SSSS-SS-HHHHHHHHHHCTSEEEEE-SSHHHHHH--HHHT---T-SEEE-TTTT
T ss_pred CCCHHHHHHHHHc-CCCEEEEecCCCCCCcCHHHHHHHHHHhCcEEeeecCCHHHHHH--HHHc---CCCEEEccccc
Confidence 5678999998876 88888887555554488999999999989999999984322221 1112 38888776543
No 414
>smart00642 Aamy Alpha-amylase domain.
Probab=55.06 E-value=12 Score=29.98 Aligned_cols=26 Identities=8% Similarity=0.344 Sum_probs=22.9
Q ss_pred CCCccCHHHHHHHHHHcCCEEEEEcc
Q 022564 206 YARLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 206 ~~~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
+|+..+++++++-||++|+-|+.|..
T Consensus 66 ~Gt~~d~~~lv~~~h~~Gi~vilD~V 91 (166)
T smart00642 66 FGTMEDFKELVDAAHARGIKVILDVV 91 (166)
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 35667899999999999999999987
No 415
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=54.58 E-value=37 Score=25.43 Aligned_cols=51 Identities=4% Similarity=0.006 Sum_probs=36.9
Q ss_pred CCCHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHc---CCEEEEEcc
Q 022564 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQ---KAIMLADMA 231 (295)
Q Consensus 181 ~id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~---~~~vivD~a 231 (295)
...++++.+.+.+.++.+|.+|.........++++.+..++. ++.+++=++
T Consensus 36 ~vp~e~~~~~a~~~~~d~V~iS~~~~~~~~~~~~~~~~L~~~~~~~i~i~~GG~ 89 (122)
T cd02071 36 RQTPEEIVEAAIQEDVDVIGLSSLSGGHMTLFPEVIELLRELGAGDILVVGGGI 89 (122)
T ss_pred CCCHHHHHHHHHHcCCCEEEEcccchhhHHHHHHHHHHHHhcCCCCCEEEEECC
Confidence 356777777776668999999877666666688888888777 456666544
No 416
>PRK09590 celB cellobiose phosphotransferase system IIB component; Reviewed
Probab=54.11 E-value=17 Score=26.66 Aligned_cols=57 Identities=9% Similarity=0.025 Sum_probs=37.0
Q ss_pred cEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCC
Q 022564 197 KLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTH 257 (295)
Q Consensus 197 k~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~ 257 (295)
+++++|....++-.=.+.+.++|+++|+-+-++++.. +.+....... .+|+++.+++
T Consensus 3 kILlvCg~G~STSlla~k~k~~~~e~gi~~~i~a~~~-~e~~~~~~~~---~~DvIll~PQ 59 (104)
T PRK09590 3 KALIICAAGMSSSMMAKKTTEYLKEQGKDIEVDAITA-TEGEKAIAAA---EYDLYLVSPQ 59 (104)
T ss_pred EEEEECCCchHHHHHHHHHHHHHHHCCCceEEEEecH-HHHHHhhccC---CCCEEEEChH
Confidence 4667776666544568899999999999888877732 2222111111 2788888865
No 417
>COG3414 SgaB Phosphotransferase system, galactitol-specific IIB component [Carbohydrate transport and metabolism]
Probab=53.71 E-value=34 Score=24.55 Aligned_cols=69 Identities=13% Similarity=0.180 Sum_probs=40.9
Q ss_pred cEEEEcCCCCC-CccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCC--CCCCC-CceEEEEEeC
Q 022564 197 KLIVAGASAYA-RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTH--KSLRG-PRGAMIFFRK 272 (295)
Q Consensus 197 k~i~l~~~n~~-~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~--K~l~g-p~gG~l~~~~ 272 (295)
|++.+|...-+ +..=-..+.++++++|+.+-+|..+ .+.... ...++|+++.|.| ..|.. |. |.+++-.
T Consensus 3 KIL~aCG~GvgSS~~ik~kve~~l~~~gi~~~~~~~~-v~~~~~-----~~~~aDiiv~s~~l~~~~~~~~~-~~v~~~~ 75 (93)
T COG3414 3 KILAACGNGVGSSTMIKMKVEEVLKELGIDVDVEQCA-VDEIKA-----LTDGADIIVTSTKLADEFEDIPK-GYVVITG 75 (93)
T ss_pred EEEEECCCCccHHHHHHHHHHHHHHHcCCCceeeeEE-eccccc-----CCCcccEEEEehHhhhhcCcCCC-ceEEEEc
Confidence 56777766665 3333347889999999984444442 222221 1234999998887 56633 44 5555443
No 418
>PF02603 Hpr_kinase_N: HPr Serine kinase N terminus; InterPro: IPR011126 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents the N-terminal region of Hpr Serine/threonine kinase PtsK. This kinase is the sensor in a multicomponent phosphorelay system in control of carbon catabolic repression in bacteria []. This kinase in unusual in that it recognises the tertiary structure of its target and is a member of a novel family unrelated to any previously described protein phosphorylating enzymes []. X-ray analysis of the full-length crystalline enzyme from Staphylococcus xylosus at a resolution of 1.95 A shows the enzyme to consist of two clearly separated domains that are assembled in a hexameric structure resembling a three-bladed propeller. The blades are formed by two N-terminal domains each, and the compact central hub assembles the C-terminal kinase domains []. ; GO: 0000155 two-component sensor activity, 0004672 protein kinase activity, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay), 0006109 regulation of carbohydrate metabolic process; PDB: 1KNX_B 1KO7_A.
Probab=53.44 E-value=20 Score=27.31 Aligned_cols=38 Identities=18% Similarity=0.192 Sum_probs=21.7
Q ss_pred HHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEE
Q 022564 187 LEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (295)
Q Consensus 187 l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD 229 (295)
+++.+.. ++-+|+++... .+-+++.++|++++++++.=
T Consensus 74 l~~l~~~-~~P~iIvt~~~----~~p~~l~e~a~~~~ipll~t 111 (127)
T PF02603_consen 74 LEKLFSY-NPPCIIVTRGL----EPPPELIELAEKYNIPLLRT 111 (127)
T ss_dssp HHHHCTT-T-S-EEEETTT-------HHHHHHHHHCT--EEEE
T ss_pred HHHHhCC-CCCEEEEECcC----CCCHHHHHHHHHhCCcEEEc
Confidence 3444443 77788887433 45789999999999988753
No 419
>KOG2142 consensus Molybdenum cofactor sulfurase [Coenzyme transport and metabolism]
Probab=53.22 E-value=18 Score=35.21 Aligned_cols=189 Identities=15% Similarity=0.127 Sum_probs=95.9
Q ss_pred chHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhh--cCCCCeEEEecCCCCcccCccccccccccccc
Q 022564 88 EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTAL--LKPHDRIMALDLPHGGHLSHGYQTDTKKISAV 164 (295)
Q Consensus 88 ~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al--~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~ 164 (295)
..+..+....|-.+..+++....++ .+.++. .+ |...++.++ ...+.+|.-...++.+|.+..-...+......
T Consensus 60 ~~l~~~v~Q~r~ril~~f~tta~dy--~v~lp~-~t~al~~vae~fp~~s~tekid~lrs~~y~hls~s~~~~~~~~~~~ 136 (728)
T KOG2142|consen 60 RSLARLVAQVRLRILALFNTTAFDY--EVSLPA-LTEALKLVAEAFPFYSQTEKIDNLRSDEYGHLSSSGHLMRLDYSGI 136 (728)
T ss_pred HHHHHHHHHHHHHHHHHhccccccc--cchhHH-HHHHHHHHHHhCccccccccccchhhhhhcccccccceeeeeeecc
Confidence 3344555555566677777644333 788888 55 666566776 45666676666555555543311111110011
Q ss_pred eeeeEE-EeeecCCCCCCCCHHHHHHHHhhcCCcEEEE-c-CCCC-CCccCHHHHHHHHH-HcCCEEEEEcccccccccc
Q 022564 165 SIFFET-MPYRLNESTGYIDYDQLEKSATLFRPKLIVA-G-ASAY-ARLYDYERIRKVCN-KQKAIMLADMAHISGLVAA 239 (295)
Q Consensus 165 g~~~~~-v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l-~-~~n~-~~~~~l~~I~~ia~-~~~~~vivD~a~~~g~~~~ 239 (295)
|. +.+ .+..+. +....++.+...-+ .-..++. . .+|. +..... .|....+ ..+-++++|.+....+.+.
T Consensus 137 gl-~sy~q~~~i~-~~~~~sls~~~~~l---s~~~L~~g~a~~nfeg~kik~-ri~d~L~ipe~~y~lldtaSrvSaf~L 210 (728)
T KOG2142|consen 137 GL-FSYSQTNEIS-DSEEFSLSESEANL---SEHSLFGGAAQSNFEGDKIKL-RIMDRLNIPESEYVLLDTASRVSAFPL 210 (728)
T ss_pred ce-EEeeeeeecc-ccccccccccccCc---ccchhcccchhcccccceeee-eeecccccCCceEEEEEeecccccccc
Confidence 11 111 111111 11111222111111 1122322 1 2332 111111 2222222 4467899999988888888
Q ss_pred CCCCCCCCcceEEEeCCCCCCCCCceEEEEEeCCchhhhccCCeeEEEeEEe
Q 022564 240 GVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEFTCRCFMI 291 (295)
Q Consensus 240 ~~~~~~~~~~D~~~~s~~K~l~gp~gG~l~~~~~~~~~~~~~~~~~~~~~~~ 291 (295)
+....+ .|++.. +.|.|+-|.|++++.+...... .|.+++++.-..
T Consensus 211 daesy~---f~~~~~-lltiFgyetgAvlv~~r~A~~~--Ggkt~sa~f~wp 256 (728)
T KOG2142|consen 211 DAESYP---FDFNPK-LLTIFGYETGAVLVMNRSAELK--GGKTASAEFSWP 256 (728)
T ss_pred hHhhCC---Ccccch-heeecCCCchhhHHHhhhhHhh--cCccceeecccc
Confidence 888888 888888 9998877886666655544432 456666665433
No 420
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=52.22 E-value=46 Score=28.96 Aligned_cols=55 Identities=11% Similarity=0.184 Sum_probs=37.2
Q ss_pred CCCHHHHHHHHhh----cCCcEEEE-c----CCCCC-CccCHHHHHHHHHHcCCEEEEEcccccc
Q 022564 181 YIDYDQLEKSATL----FRPKLIVA-G----ASAYA-RLYDYERIRKVCNKQKAIMLADMAHISG 235 (295)
Q Consensus 181 ~id~e~l~~~i~~----~~tk~i~l-~----~~n~~-~~~~l~~I~~ia~~~~~~vivD~a~~~g 235 (295)
..+++++..+++. -+..++++ + .++++ ...++..|..+-+..+++|++|..|+.|
T Consensus 144 ~~s~~e~~~A~e~i~~~Gn~~i~L~~rG~~t~~~Y~~~~vdl~~i~~lk~~~~~pV~~D~sHs~G 208 (266)
T PRK13398 144 SATLEEWLYAAEYIMSEGNENVVLCERGIRTFETYTRNTLDLAAVAVIKELSHLPIIVDPSHATG 208 (266)
T ss_pred CCCHHHHHHHHHHHHhcCCCeEEEEECCCCCCCCCCHHHHHHHHHHHHHhccCCCEEEeCCCccc
Confidence 3477887776642 14455554 3 34554 4556777777777779999999999887
No 421
>TIGR00322 diphth2_R diphthamide biosynthesis protein 2-related domain. Because archaeal species are known to have the diphthamide modification to the conserved His of archaeal and eukaryotic EF-2, it may be that the lone homolog of YKL191W in M. jannaschii, A. fulgidus, and M. thermoautotrophicum is orthologous. However, each of these is considerably shorter than YKL191W and seems more closely related to the uncharacterized protein YIL103W than to YKL191W.
Probab=51.95 E-value=30 Score=31.17 Aligned_cols=79 Identities=8% Similarity=0.059 Sum_probs=52.7
Q ss_pred CCCCCHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHH---cCCEEEEEcccccccccc-CCCCCCCCcceEEEe
Q 022564 179 TGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNK---QKAIMLADMAHISGLVAA-GVIPSPFEYADVVTT 254 (295)
Q Consensus 179 ~~~id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~---~~~~vivD~a~~~g~~~~-~~~~~~~~~~D~~~~ 254 (295)
++.++.+.+.+.|++.+.+-|.+..|- |-...-.+|++..++ ..++|.-|-++++-.++. ..... ++|+++.
T Consensus 2 ~y~~e~~~~i~~I~~~~~krV~LQfPd-gLl~~a~~ia~~l~~~~~~~v~IlaD~~YGaCcvdd~~a~~~---~aD~iVH 77 (332)
T TIGR00322 2 NYNLETEKVIGNIRKYNAKRVGLQMPE-GLKIRALEIAEIIEQFCGVETVISGDTSFGACDIDDFTARAL---DVDLIVH 77 (332)
T ss_pred CccccHHHHHHHHHHcCCCEEEEECCH-HHHHHHHHHHHHHHhccCceEEEEcCCceecCCCCHHHHhhc---CCCEEEE
Confidence 356778888888877678888887544 333445566666665 466777887766555532 12222 4999999
Q ss_pred CCCCCCC
Q 022564 255 TTHKSLR 261 (295)
Q Consensus 255 s~~K~l~ 261 (295)
-+|-.+.
T Consensus 78 yGHscl~ 84 (332)
T TIGR00322 78 YAHTPLV 84 (332)
T ss_pred cCCCCCC
Confidence 9999885
No 422
>smart00481 POLIIIAc DNA polymerase alpha chain like domain. DNA polymerase alpha chain like domain, incl. family of hypothetical proteins
Probab=51.88 E-value=64 Score=20.98 Aligned_cols=47 Identities=19% Similarity=0.166 Sum_probs=32.4
Q ss_pred CCCCHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEE
Q 022564 180 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 228 (295)
Q Consensus 180 ~~id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~viv 228 (295)
+...++++.+...+.+.+.+.++..++ .....++.++++++|+.++.
T Consensus 13 ~~~~~~~~~~~a~~~g~~~v~iTDh~~--~~~~~~~~~~~~~~gi~~i~ 59 (67)
T smart00481 13 GALSPEELVKRAKELGLKAIAITDHGN--LFGAVEFYKAAKKAGIKPII 59 (67)
T ss_pred ccCCHHHHHHHHHHcCCCEEEEeeCCc--ccCHHHHHHHHHHcCCeEEE
Confidence 456778887777665788888875553 33345777888888876653
No 423
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=51.01 E-value=58 Score=24.90 Aligned_cols=50 Identities=10% Similarity=0.117 Sum_probs=36.6
Q ss_pred CCHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcC---CEEEEEcc
Q 022564 182 IDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQK---AIMLADMA 231 (295)
Q Consensus 182 id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~---~~vivD~a 231 (295)
..++++.++..++++.+|.++.-+......++++.+.+++.| +.+++=++
T Consensus 37 v~~e~~v~aa~~~~adiVglS~L~t~~~~~~~~~~~~l~~~gl~~v~vivGG~ 89 (128)
T cd02072 37 SPQEEFIDAAIETDADAILVSSLYGHGEIDCKGLREKCDEAGLKDILLYVGGN 89 (128)
T ss_pred CCHHHHHHHHHHcCCCEEEEeccccCCHHHHHHHHHHHHHCCCCCCeEEEECC
Confidence 567788777766689988887555556677889988888875 45666554
No 424
>PF12813 XPG_I_2: XPG domain containing
Probab=50.47 E-value=51 Score=28.29 Aligned_cols=38 Identities=16% Similarity=0.204 Sum_probs=26.4
Q ss_pred HHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCceEEEEEeCC
Q 022564 213 ERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKG 273 (295)
Q Consensus 213 ~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~gG~l~~~~~ 273 (295)
.+++.+|+++|+.|+... .|++++.. |+.||++..+.=
T Consensus 32 ~~~A~~A~~~~~~VLt~D------------------SDf~I~dl-----g~~~~yipl~~l 69 (246)
T PF12813_consen 32 RECAALARKWGCPVLTND------------------SDFLIHDL-----GQKGGYIPLDSL 69 (246)
T ss_pred HHHHHHHHHcCCeEEccC------------------CCEEEecc-----CCCceEEEeeee
Confidence 378899999998887654 46666644 556666666653
No 425
>cd05564 PTS_IIB_chitobiose_lichenan PTS_IIB_chitobiose_lichenan: subunit IIB of enzyme II (EII) of the N,N-diacetylchitobiose-specific and lichenan-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS). In these systems, EII is either a lichenan- or an N,N-diacetylchitobiose-specific permease with two cytoplasmic domains (IIA and IIB) and a transmembrane channel IIC domain. In the chitobiose system, these subunits are expressed as separate proteins from chbA, chbB, and chbC of the chb operon (formerly the cel (cellulose) operon). In the lichenan system, these subunits are expressed from licA, licB, and licC of the lic operon. The lic operon of Bacillus subtilis is required for the transport and degradation of oligomeric beta-glucosides, which are produced by extracellular enzymes on substrates such as lichenan or barley glucan. The lic operon is transcribed from a gammaA-dependent promoter and is inducible by lichenan, lichenan hydrolysate, and cellobiose. The IIB d
Probab=50.08 E-value=27 Score=25.05 Aligned_cols=55 Identities=15% Similarity=0.117 Sum_probs=35.8
Q ss_pred cEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCC
Q 022564 197 KLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTH 257 (295)
Q Consensus 197 k~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~ 257 (295)
+++++|.+..++-.=++++.+.++++|+.+-++.+.... +... . ...|+++.+++
T Consensus 1 kIl~~Cg~G~sTS~~~~ki~~~~~~~~~~~~v~~~~~~~-~~~~--~---~~~Diil~~Pq 55 (96)
T cd05564 1 KILLVCSAGMSTSILVKKMKKAAEKRGIDAEIEAVPESE-LEEY--I---DDADVVLLGPQ 55 (96)
T ss_pred CEEEEcCCCchHHHHHHHHHHHHHHCCCceEEEEecHHH-HHHh--c---CCCCEEEEChh
Confidence 356677666652233889999999999988777773322 2211 1 12788888876
No 426
>PF13378 MR_MLE_C: Enolase C-terminal domain-like; PDB: 3FCP_B 3P0W_D 3VFC_A 3VDG_A 3FJ4_B 3CT2_B 3DGB_A 3V3W_A 3V4B_A 3NO1_E ....
Probab=49.89 E-value=34 Score=24.94 Aligned_cols=50 Identities=4% Similarity=0.069 Sum_probs=38.6
Q ss_pred CCCHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEc
Q 022564 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 230 (295)
Q Consensus 181 ~id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~ 230 (295)
..++.++++.++..-..++-+.....|.+....+++++|+++|+.+..=.
T Consensus 4 ~~~~~~~~~li~~~a~d~~~~~~~~~GGit~~~~i~~~A~~~gi~~~~h~ 53 (111)
T PF13378_consen 4 LFSLHDFRRLIEAGAVDIVQIDPTRCGGITEALRIAALAEAHGIPVMPHS 53 (111)
T ss_dssp SSSHHHHHHHHHTTSCSEEEEBHHHHTSHHHHHHHHHHHHHTT-EEEEBS
T ss_pred CCCHHHHHHHHHcCCCCEEEeCchhcCCHHHHHHHHHHHHHhCCCEEecC
Confidence 35788889888763456666666666778889999999999999988766
No 427
>KOG0352 consensus ATP-dependent DNA helicase [Replication, recombination and repair]
Probab=49.86 E-value=54 Score=30.65 Aligned_cols=45 Identities=9% Similarity=0.110 Sum_probs=26.9
Q ss_pred CCcEEEEcCCCCCCccCHHHHHHHHHHcCC--EEEEEccccccccccC
Q 022564 195 RPKLIVAGASAYARLYDYERIRKVCNKQKA--IMLADMAHISGLVAAG 240 (295)
Q Consensus 195 ~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~--~vivD~a~~~g~~~~~ 240 (295)
++|+++|++-.- .....+.+..-.+.++. +++||+||...-...+
T Consensus 113 ~~K~LYITPE~A-At~~FQ~lLn~L~~r~~L~Y~vVDEAHCVSQWGHD 159 (641)
T KOG0352|consen 113 TIKMLYITPEGA-ATDGFQKLLNGLANRDVLRYIVVDEAHCVSQWGHD 159 (641)
T ss_pred ceeEEEEchhhh-hhhhHHHHHHHHhhhceeeeEEechhhhHhhhccc
Confidence 578898873222 12234455544445554 7999999986655443
No 428
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=49.61 E-value=45 Score=28.65 Aligned_cols=93 Identities=13% Similarity=0.088 Sum_probs=51.4
Q ss_pred eEEeCCChH-HHHHHHHhhcCCCCeEEEec-CCCCcccCccccccccccccceeeeEEEeeecCCCCCCC-CHHHHHHHH
Q 022564 115 NVQSLSGSP-SNFQVYTALLKPHDRIMALD-LPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYI-DYDQLEKSA 191 (295)
Q Consensus 115 ~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~i-d~e~l~~~i 191 (295)
.|.+-.|++ +-. +...|...|. |+++. .++++-.... ...+ .++ ..+.+ |.+++++.+
T Consensus 2 ~ILvlgGTtE~r~-la~~L~~~g~-v~~sv~t~~g~~~~~~--------~~~~-----~~v----~~G~lg~~~~l~~~l 62 (249)
T PF02571_consen 2 KILVLGGTTEGRK-LAERLAEAGY-VIVSVATSYGGELLKP--------ELPG-----LEV----RVGRLGDEEGLAEFL 62 (249)
T ss_pred EEEEEechHHHHH-HHHHHHhcCC-EEEEEEhhhhHhhhcc--------ccCC-----ceE----EECCCCCHHHHHHHH
Confidence 466778888 777 7788888887 65543 1122111100 0000 111 12566 999999999
Q ss_pred hhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEE
Q 022564 192 TLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIML 227 (295)
Q Consensus 192 ~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vi 227 (295)
++++.++| +..+|+-...=-+.+.+.|++.|+..+
T Consensus 63 ~~~~i~~v-IDATHPfA~~is~na~~a~~~~~ipyl 97 (249)
T PF02571_consen 63 RENGIDAV-IDATHPFAAEISQNAIEACRELGIPYL 97 (249)
T ss_pred HhCCCcEE-EECCCchHHHHHHHHHHHHhhcCcceE
Confidence 87566655 455554322213355677777776543
No 429
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=49.23 E-value=13 Score=32.32 Aligned_cols=29 Identities=10% Similarity=0.344 Sum_probs=25.2
Q ss_pred CCCCCCccCHHHHHHHHHHcCCEEEEEcc
Q 022564 203 ASAYARLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 203 ~~n~~~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
.+..|+..+++++++.||++|+-||.|.+
T Consensus 45 d~~~Gt~~d~~~Lv~~~h~~gi~VilD~V 73 (316)
T PF00128_consen 45 DPRFGTMEDFKELVDAAHKRGIKVILDVV 73 (316)
T ss_dssp STTTBHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred ccccchhhhhhhhhhccccccceEEEeee
Confidence 34556777899999999999999999998
No 430
>cd05565 PTS_IIB_lactose PTS_IIB_lactose: subunit IIB of enzyme II (EII) of the lactose-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS) found in Firmicutes as well as Actinobacteria. In this system, EII is a lactose-specific permease with two cytoplasmic domains (IIA and IIB) and a transmembrane channel IIC domain. The IIC and IIB domains are expressed as a single protein from the lac operon. The IIB domain fold includes a central four-stranded parallel open twisted beta-sheet flanked by alpha-helices on both sides. The seven major PTS systems with this IIB fold include lactose, chitobiose/lichenan, ascorbate, galactitol, mannitol, fructose, and a sensory system with similarity to the bacterial bgl system.
Probab=49.21 E-value=32 Score=25.00 Aligned_cols=55 Identities=13% Similarity=-0.000 Sum_probs=36.2
Q ss_pred cEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCC
Q 022564 197 KLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTH 257 (295)
Q Consensus 197 k~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~ 257 (295)
+++++|....++..=.+++.+.|+++|+-+-+.+. ....+... ...+|+++.+++
T Consensus 2 ~Ill~C~~GaSSs~la~km~~~a~~~gi~~~i~a~-~~~e~~~~-----~~~~Dvill~PQ 56 (99)
T cd05565 2 NVLVLCAGGGTSGLLANALNKGAKERGVPLEAAAG-AYGSHYDM-----IPDYDLVILAPQ 56 (99)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEEe-eHHHHHHh-----ccCCCEEEEcCh
Confidence 45666755555555688999999999998777765 22222221 123888888876
No 431
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=49.00 E-value=41 Score=30.14 Aligned_cols=107 Identities=14% Similarity=0.010 Sum_probs=61.4
Q ss_pred eEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccce--eeeEEEeeecCCCCCCCCHHHHHHHH
Q 022564 115 NVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVS--IFFETMPYRLNESTGYIDYDQLEKSA 191 (295)
Q Consensus 115 ~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g--~~~~~v~~~~~~~~~~id~e~l~~~i 191 (295)
.|.+|.|+- .-.+....|++.|+.|++.+.-..+......+.+. +.+ ..+.+...+ .-|.+.|++..
T Consensus 4 ~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~----l~~~~~~v~f~~~D------l~D~~~L~kvF 73 (343)
T KOG1371|consen 4 HVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQ----LLGEGKSVFFVEGD------LNDAEALEKLF 73 (343)
T ss_pred EEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHH----hcCCCCceEEEEec------cCCHHHHHHHH
Confidence 577777766 55557888999999999999666655433322221 222 233333322 44889999988
Q ss_pred hhcCCcEEEE-c---CCCCCCc----------cCHHHHHHHHHHcCCEEEEEcc
Q 022564 192 TLFRPKLIVA-G---ASAYARL----------YDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 192 ~~~~tk~i~l-~---~~n~~~~----------~~l~~I~~ia~~~~~~vivD~a 231 (295)
+..+...|+. . ...+... .-.-.+.+.+++|++.-++=.+
T Consensus 74 ~~~~fd~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~ss 127 (343)
T KOG1371|consen 74 SEVKFDAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSS 127 (343)
T ss_pred hhcCCceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEec
Confidence 7655555542 1 1111111 1122567888999875444433
No 432
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=48.61 E-value=1.7e+02 Score=26.11 Aligned_cols=101 Identities=14% Similarity=0.092 Sum_probs=62.8
Q ss_pred eEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhh
Q 022564 115 NVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL 193 (295)
Q Consensus 115 ~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~ 193 (295)
.|.+|.|+- .-.+.+..|++.|-+|++.+.-..++..... .. ..+.+. ....|-+.|.+.+.+
T Consensus 2 ~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~--------~~--~~~f~~------gDi~D~~~L~~vf~~ 65 (329)
T COG1087 2 KVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALL--------KL--QFKFYE------GDLLDRALLTAVFEE 65 (329)
T ss_pred eEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhh--------hc--cCceEE------eccccHHHHHHHHHh
Confidence 477777777 6666888899999999999976666643221 00 011121 224588899999988
Q ss_pred cCCcEEEE-c-CCCCC--CccCH----------HHHHHHHHHcCCE--EEEEcc
Q 022564 194 FRPKLIVA-G-ASAYA--RLYDY----------ERIRKVCNKQKAI--MLADMA 231 (295)
Q Consensus 194 ~~tk~i~l-~-~~n~~--~~~~l----------~~I~~ia~~~~~~--vivD~a 231 (295)
+++.+|+- . ....| ...|+ -.|.+.|+++|+. |++=.|
T Consensus 66 ~~idaViHFAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStA 119 (329)
T COG1087 66 NKIDAVVHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTA 119 (329)
T ss_pred cCCCEEEECccccccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecch
Confidence 78877763 1 22222 22333 3678889999874 444333
No 433
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=48.27 E-value=16 Score=34.66 Aligned_cols=28 Identities=11% Similarity=0.121 Sum_probs=25.1
Q ss_pred CCCCCccCHHHHHHHHHHcCCEEEEEcc
Q 022564 204 SAYARLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 204 ~n~~~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
+++|+..+++++++-||++|+.||.|.+
T Consensus 75 ~~fGt~~dl~~Li~~~H~~Gi~vi~D~V 102 (479)
T PRK09441 75 TKYGTKEELLNAIDALHENGIKVYADVV 102 (479)
T ss_pred cCcCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 5556778899999999999999999998
No 434
>PRK13602 putative ribosomal protein L7Ae-like; Provisional
Probab=47.49 E-value=44 Score=23.26 Aligned_cols=45 Identities=16% Similarity=0.002 Sum_probs=30.1
Q ss_pred HHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEc
Q 022564 184 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 230 (295)
Q Consensus 184 ~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~ 230 (295)
.++..++++..+.++|++.....+ .-.+.|..+|++++++++.-.
T Consensus 16 ~~~v~kai~~gkaklViiA~D~~~--~~~~~i~~~c~~~~Vp~~~~~ 60 (82)
T PRK13602 16 TKQTVKALKRGSVKEVVVAEDADP--RLTEKVEALANEKGVPVSKVD 60 (82)
T ss_pred HHHHHHHHHcCCeeEEEEECCCCH--HHHHHHHHHHHHcCCCEEEEC
Confidence 356677777657888888421111 246788899999999876433
No 435
>COG0379 NadA Quinolinate synthase [Coenzyme metabolism]
Probab=47.44 E-value=1.8e+02 Score=25.97 Aligned_cols=76 Identities=14% Similarity=0.340 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHHHHcCceecCCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCC
Q 022564 32 PEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEK 111 (295)
Q Consensus 32 ~~~~~~~~~~~~~~~~~i~L~~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~ 111 (295)
.....++.+.. ++++.+-| +.++..|++.+ +.++..+ .|+ +.+..+ ..+.
T Consensus 21 ~~l~~~I~~Lk-~e~navIL--AH~Yq~peIq~-iAD~vGD-------------------SL~--LAr~A~---~~~A-- 70 (324)
T COG0379 21 ADLKEEIKRLK-KERNAVIL--AHNYQRPEIQD-IADFVGD-------------------SLE--LAREAA---KTDA-- 70 (324)
T ss_pred HHHHHHHHHHH-HhcCcEEE--EecCCCHHHHH-HHHhhcc-------------------HHH--HHHHHh---hCCC--
Confidence 34444444432 33345555 67788888877 6655433 122 112221 2344
Q ss_pred cceeEEeCCChH--HHHHHHHhhcCCCCeEEEec
Q 022564 112 WGVNVQSLSGSP--SNFQVYTALLKPHDRIMALD 143 (295)
Q Consensus 112 ~~~~v~~~sG~~--a~~~~~~al~~~gd~Vl~~~ 143 (295)
.+++..|.. |-. .-+++|..+||+|+
T Consensus 71 ---d~IVf~GV~FMaET---AkiLnPeK~VL~Pd 98 (324)
T COG0379 71 ---DTIVFAGVHFMAET---AKILNPEKTVLLPD 98 (324)
T ss_pred ---CEEEEeceeehHhh---HhhcCCCCeEecCC
Confidence 455557877 444 45689999999988
No 436
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=47.14 E-value=67 Score=24.76 Aligned_cols=49 Identities=12% Similarity=0.159 Sum_probs=35.1
Q ss_pred CCHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCC---EEEEEc
Q 022564 182 IDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKA---IMLADM 230 (295)
Q Consensus 182 id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~---~vivD~ 230 (295)
..++++.++..++++.+|.++.-+......++++.+.+++.|+ .+++=+
T Consensus 39 v~~e~~v~aa~~~~adiVglS~l~~~~~~~~~~~~~~l~~~gl~~~~vivGG 90 (134)
T TIGR01501 39 SPQEEFIKAAIETKADAILVSSLYGHGEIDCKGLRQKCDEAGLEGILLYVGG 90 (134)
T ss_pred CCHHHHHHHHHHcCCCEEEEecccccCHHHHHHHHHHHHHCCCCCCEEEecC
Confidence 5678887777766899888875444566678899999988863 444443
No 437
>KOG3974 consensus Predicted sugar kinase [Carbohydrate transport and metabolism]
Probab=45.78 E-value=23 Score=30.56 Aligned_cols=47 Identities=21% Similarity=0.227 Sum_probs=33.9
Q ss_pred CHHHHHHHHhhcCCcEEEEcC---CCCCCccCHHHHHHHHHHcCCEEEEEcc
Q 022564 183 DYDQLEKSATLFRPKLIVAGA---SAYARLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 183 d~e~l~~~i~~~~tk~i~l~~---~n~~~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
+.+.+++.+. +..++++++ -++.....+++|.+++++.++++++|+-
T Consensus 91 av~~i~k~L~--RlhavVIGPGLGRdp~~~k~i~~iley~~~~dvP~VIDaD 140 (306)
T KOG3974|consen 91 AVDIIEKLLQ--RLHAVVIGPGLGRDPAILKEIAKILEYLRGKDVPLVIDAD 140 (306)
T ss_pred hHhHHHHHHh--heeEEEECCCCCCCHHHHHHHHHHHHHHhcCCCcEEEcCC
Confidence 5666676564 677787752 2222455688999999999999999975
No 438
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=45.50 E-value=43 Score=28.08 Aligned_cols=43 Identities=19% Similarity=0.349 Sum_probs=29.3
Q ss_pred HHHHHhhcCCcEEEEcCCCCC----CccCHHHHHHHHHHcCC-EEEEEc
Q 022564 187 LEKSATLFRPKLIVAGASAYA----RLYDYERIRKVCNKQKA-IMLADM 230 (295)
Q Consensus 187 l~~~i~~~~tk~i~l~~~n~~----~~~~l~~I~~ia~~~~~-~vivD~ 230 (295)
+..++.. +|+.+++..|--| .+.+++.|....++.|+ ++|.|-
T Consensus 150 IARaLa~-~P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~rgiGvLITDH 197 (243)
T COG1137 150 IARALAA-NPKFILLDEPFAGVDPIAVIDIQRIIKHLKDRGIGVLITDH 197 (243)
T ss_pred HHHHHhc-CCCEEEecCCccCCCchhHHHHHHHHHHHHhCCceEEEccc
Confidence 4555555 7888888744443 66778888888888887 555663
No 439
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=45.12 E-value=79 Score=25.99 Aligned_cols=51 Identities=12% Similarity=0.181 Sum_probs=40.0
Q ss_pred CCCHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcC----CEEEEEcc
Q 022564 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQK----AIMLADMA 231 (295)
Q Consensus 181 ~id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~----~~vivD~a 231 (295)
.+..+++.+.+.+.++.+|.++.+.......++++.+.+++.+ +.|++=++
T Consensus 121 ~vp~e~~v~~~~~~~pd~v~lS~~~~~~~~~~~~~i~~l~~~~~~~~v~i~vGG~ 175 (197)
T TIGR02370 121 DVPIDTVVEKVKKEKPLMLTGSALMTTTMYGQKDINDKLKEEGYRDSVKFMVGGA 175 (197)
T ss_pred CCCHHHHHHHHHHcCCCEEEEccccccCHHHHHHHHHHHHHcCCCCCCEEEEECh
Confidence 4678889988888799999998777666677888888888873 56777665
No 440
>COG1954 GlpP Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]
Probab=44.83 E-value=41 Score=27.07 Aligned_cols=48 Identities=15% Similarity=0.185 Sum_probs=35.0
Q ss_pred CHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcC--CEEEEEccccc
Q 022564 183 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQK--AIMLADMAHIS 234 (295)
Q Consensus 183 d~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~--~~vivD~a~~~ 234 (295)
|..+++++++. ....+++=.++ ...++++.+.++++| +++++|-..+.
T Consensus 12 ~~~~le~~les-~~~~vflL~~~---i~~ik~ivk~lK~~gK~vfiHvDLv~Gl 61 (181)
T COG1954 12 DNKDLEKALES-ESQYVFLLTGH---ILNIKEIVKKLKNRGKTVFIHVDLVEGL 61 (181)
T ss_pred hHHHHHHHhcC-CCeEEEEEech---hhhHHHHHHHHHhCCcEEEEEeHHhccc
Confidence 56788888876 67777664333 567999999999986 46777776543
No 441
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=44.22 E-value=73 Score=23.66 Aligned_cols=42 Identities=10% Similarity=0.113 Sum_probs=26.7
Q ss_pred HHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEcc
Q 022564 184 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 184 ~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
++.++++... .++.+++.+. ..-+++.++|+++|+-++-..+
T Consensus 69 ~~~v~~~~~~-g~~~v~~~~g-----~~~~~~~~~a~~~gi~vigp~C 110 (116)
T PF13380_consen 69 PEIVDEAAAL-GVKAVWLQPG-----AESEELIEAAREAGIRVIGPNC 110 (116)
T ss_dssp HHHHHHHHHH-T-SEEEE-TT-----S--HHHHHHHHHTT-EEEESS-
T ss_pred HHHHHHHHHc-CCCEEEEEcc-----hHHHHHHHHHHHcCCEEEeCCc
Confidence 3445555544 7888988744 4567999999999999887665
No 442
>PLN02673 quinolinate synthetase A
Probab=44.21 E-value=3.4e+02 Score=27.12 Aligned_cols=90 Identities=9% Similarity=-0.019 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHHHHcCceecCCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCC
Q 022564 32 PEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEK 111 (295)
Q Consensus 32 ~~~~~~~~~~~~~~~~~i~L~~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~ 111 (295)
+...+.+.+.+ +.++.+-| ..++..|+| +.+.++...+|+.++.+. .|+ +.+..++.-..+.
T Consensus 256 ~~~v~eI~~lk-kek~avIL--AH~Yq~pEV-Q~iADa~~~~~p~~~vGD----------SL~--LA~~A~~~~~~~a-- 317 (724)
T PLN02673 256 ESKVEELVNVL-KEKKIGVV--AHFYMDPEV-QGVLTAAQKHWPHISISD----------SLI--MADSAVKMAKAGC-- 317 (724)
T ss_pred HHHHHHHHHHH-HhcCcEEE--EecCCCHHH-HHHhhhhhcccCCCeecc----------HHH--HHHHHHHhccCCC--
Confidence 34445555432 33445555 678889999 455665556676665543 233 3344433234454
Q ss_pred cceeEEeCCChH-HHHHHHHhhcCCC----CeE-EEec
Q 022564 112 WGVNVQSLSGSP-SNFQVYTALLKPH----DRI-MALD 143 (295)
Q Consensus 112 ~~~~v~~~sG~~-a~~~~~~al~~~g----d~V-l~~~ 143 (295)
.+++..|.. .-. ....+++|. .+| ++++
T Consensus 318 ---~~IVFcGV~FMAE-tA~kIL~p~~~~~k~V~llPd 351 (724)
T PLN02673 318 ---QFITVLGVDFMSE-NVRAILDQAGFGEVGVYRMSN 351 (724)
T ss_pred ---CEEEEeceeeHHh-hHHHhcCCCccCCceEEeCCC
Confidence 344447877 222 334567774 456 4666
No 443
>TIGR00853 pts-lac PTS system, lactose/cellobiose family IIB component. Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains.The Lac family includes several sequenced lactose (b-galactoside) permeases of Gram-positive bacteria as well as those in E. coli. While the Lac family usually consists of two polypeptide components IIA and IICB, the Chb permease of E. coli consists of three IIA, IIB and IIC. This family is specific for the IIB subunit of the Lac PTS family.
Probab=44.18 E-value=39 Score=24.26 Aligned_cols=56 Identities=11% Similarity=0.121 Sum_probs=36.3
Q ss_pred CcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCC
Q 022564 196 PKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTH 257 (295)
Q Consensus 196 tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~ 257 (295)
.+++++|.+..++-.=++.+.++++++|+-+-++.+.... +.... . ..|+++.+++
T Consensus 4 ~~ILl~C~~G~sSS~l~~k~~~~~~~~gi~~~v~a~~~~~-~~~~~--~---~~Dvill~pq 59 (95)
T TIGR00853 4 TNILLLCAAGMSTSLLVNKMNKAAEEYGVPVKIAAGSYGA-AGEKL--D---DADVVLLAPQ 59 (95)
T ss_pred cEEEEECCCchhHHHHHHHHHHHHHHCCCcEEEEEecHHH-HHhhc--C---CCCEEEECch
Confidence 4677778666653344689999999999988777763222 22111 1 2788887765
No 444
>PRK13601 putative L7Ae-like ribosomal protein; Provisional
Probab=43.61 E-value=62 Score=22.59 Aligned_cols=45 Identities=13% Similarity=0.093 Sum_probs=30.7
Q ss_pred HHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEcc
Q 022564 185 DQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 185 e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
++..++++..+.++|++.... + ..-.+.|.++|+.++++++...+
T Consensus 14 ~~vlkaIk~gkakLViiA~Da-~-~~~~k~i~~~c~~~~Vpv~~~~t 58 (82)
T PRK13601 14 KQTLKAITNCNVLQVYIAKDA-E-EHVTKKIKELCEEKSIKIVYIDT 58 (82)
T ss_pred HHHHHHHHcCCeeEEEEeCCC-C-HHHHHHHHHHHHhCCCCEEEeCC
Confidence 456667765578888884211 1 23467889999999999865554
No 445
>cd00248 Mth938-like Mth938-like domain. The members of this family include: Mth938, 2P1, Xcr35, Rpa2829, and several uncharacterized sequences. Mth938 is a hypothetical protein encoded by the Methanobacterium thermoautotrophicum (Mth) genome. This protein crystallizes as a dimer, although it is monomeric in solution, with one disulfide bond in each monomer. 2P1 is a partially characterized nuclear protein which is homologous to E3-3 from rat and known to be alternately spliced. Xcr35 and Rpa2829 are hypothetical proteins of unknown function from the Xanthomonas campestris and Rhodopseudomonas palustris genomes, respectively, for which the crystal structures have been determined.
Probab=42.21 E-value=1.1e+02 Score=22.52 Aligned_cols=49 Identities=12% Similarity=0.076 Sum_probs=36.1
Q ss_pred CCCHHHHHHHHhhcC-CcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEcc
Q 022564 181 YIDYDQLEKSATLFR-PKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 181 ~id~e~l~~~i~~~~-tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
.++.+++...+.. + +.+|+++.-... ..+-.++.+..+++|+-+-+-.+
T Consensus 38 ~l~~~~l~~~~~~-~~peiliiGTG~~~-~~~~~~~~~~l~~~gI~vE~m~T 87 (109)
T cd00248 38 DLDPEALLPLLAE-DRPDILLIGTGAEI-AFLPRALRAALRAAGIGVEVMST 87 (109)
T ss_pred cCCHHHHHHHHhh-CCCCEEEEcCCCCC-CcCCHHHHHHHHHcCCeEEEeCc
Confidence 6899999988876 5 889999744444 34557788899999987665444
No 446
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=41.97 E-value=2.2e+02 Score=24.38 Aligned_cols=90 Identities=13% Similarity=0.042 Sum_probs=51.5
Q ss_pred eEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCC-CHHHHHHHHh
Q 022564 115 NVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYI-DYDQLEKSAT 192 (295)
Q Consensus 115 ~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~i-d~e~l~~~i~ 192 (295)
.|.+-.|++ +-. +...+.+.|-.++++.....+-.. ..+ ++ + ..+.+ |.+.+++.++
T Consensus 4 ~IlvlgGT~egr~-la~~L~~~g~~v~~Svat~~g~~~-----------~~~-----~~--v--~~G~l~~~~~l~~~l~ 62 (248)
T PRK08057 4 RILLLGGTSEARA-LARALAAAGVDIVLSLAGRTGGPA-----------DLP-----GP--V--RVGGFGGAEGLAAYLR 62 (248)
T ss_pred eEEEEechHHHHH-HHHHHHhCCCeEEEEEccCCCCcc-----------cCC-----ce--E--EECCCCCHHHHHHHHH
Confidence 567778888 666 666776777777765522111100 011 11 1 12567 9999999998
Q ss_pred hcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEE
Q 022564 193 LFRPKLIVAGASAYARLYDYERIRKVCNKQKAIM 226 (295)
Q Consensus 193 ~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~v 226 (295)
+++.++| +..+|+-...=-+-+.+.|++.|+..
T Consensus 63 ~~~i~~V-IDATHPfA~~is~~a~~ac~~~~ipy 95 (248)
T PRK08057 63 EEGIDLV-IDATHPYAAQISANAAAACRALGIPY 95 (248)
T ss_pred HCCCCEE-EECCCccHHHHHHHHHHHHHHhCCcE
Confidence 8667655 56555432221235567777776543
No 447
>TIGR00789 flhB_rel flhB C-terminus-related protein. This model describes a short protein (80-93 residues) homologous to the C-terminus of the flagellar biosynthetic protein FlhB. It is found so far only in species that also have FlhB. In a phylogenetic tree based on alignment of both this family and the homologous region of FlhB and its homologs, the members of this family form a monophyletic set.
Probab=41.67 E-value=23 Score=24.79 Aligned_cols=21 Identities=24% Similarity=0.265 Sum_probs=18.7
Q ss_pred CHHHHHHHHHHcCCEEEEEcc
Q 022564 211 DYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 211 ~l~~I~~ia~~~~~~vivD~a 231 (295)
--++|.++|+++|++++.|..
T Consensus 28 ~A~~I~~~A~e~~VPi~~~~~ 48 (82)
T TIGR00789 28 VAERIIEIAKKHGIPIVEDPD 48 (82)
T ss_pred HHHHHHHHHHHcCCCEEeCHH
Confidence 356899999999999999987
No 448
>PF01248 Ribosomal_L7Ae: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family; InterPro: IPR004038 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, ribosomal protein L30 from eukaryotes and archaebacteria, Gadd45 and MyD118 [].; PDB: 2CZW_A 3V7E_B 2QEX_F 1YJ9_F 1VQ8_F 1YJN_F 3I56_F 1VQ6_F 2OTJ_F 1YIJ_F ....
Probab=40.74 E-value=71 Score=22.52 Aligned_cols=46 Identities=9% Similarity=0.152 Sum_probs=29.6
Q ss_pred HHHHHHHHhhcCCcEEEEcCCCCCCccCHHH-HHHHHHHcCCEEEEEcc
Q 022564 184 YDQLEKSATLFRPKLIVAGASAYARLYDYER-IRKVCNKQKAIMLADMA 231 (295)
Q Consensus 184 ~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~-I~~ia~~~~~~vivD~a 231 (295)
..+..+.++..+.+++++..... ...... |..+|++++++++.=..
T Consensus 20 ~~~v~k~l~~~~~~lvilA~d~~--~~~~~~~l~~~c~~~~Ip~~~~~s 66 (95)
T PF01248_consen 20 IKEVLKALKKGKAKLVILAEDCS--PDSIKKHLPALCEEKNIPYVFVPS 66 (95)
T ss_dssp HHHHHHHHHTTCESEEEEETTSS--SGHHHHHHHHHHHHTTEEEEEESH
T ss_pred hHHHHHHHHcCCCcEEEEcCCCC--hhhhcccchhheeccceeEEEECC
Confidence 45566777654678888752221 233555 88899999998765443
No 449
>cd00984 DnaB_C DnaB helicase C terminal domain. The hexameric helicase DnaB unwinds the DNA duplex at the chromosome replication fork. Although the mechanism by which DnaB both couples ATP hydrolysis to translocation along DNA and denatures the duplex is unknown, a change in the quaternary structure of the protein involving dimerization of the N-terminal domain has been observed and may occur during the enzymatic cycle. This C-terminal domain contains an ATP-binding site and is therefore probably the site of ATP hydrolysis.
Probab=40.58 E-value=1e+02 Score=25.72 Aligned_cols=49 Identities=10% Similarity=0.066 Sum_probs=30.4
Q ss_pred CCCCHHHHHHHHh----hcCCcEEEEcC-CCC--CC--c-------cCHHHHHHHHHHcCCEEEE
Q 022564 180 GYIDYDQLEKSAT----LFRPKLIVAGA-SAY--AR--L-------YDYERIRKVCNKQKAIMLA 228 (295)
Q Consensus 180 ~~id~e~l~~~i~----~~~tk~i~l~~-~n~--~~--~-------~~l~~I~~ia~~~~~~viv 228 (295)
..+++++|++.+. ..++++|++.+ +.. +. . .-+..|.++|+++|+.+++
T Consensus 104 ~~~~~~~l~~~i~~~~~~~~~~~vvID~l~~l~~~~~~~~~~~~~~~~~~~L~~la~~~~~~ii~ 168 (242)
T cd00984 104 SSLTVSDIRSRARRLKKEHGLGLIVIDYLQLMSGSKKKGNRQQEVAEISRSLKLLAKELNVPVIA 168 (242)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEcCchhcCCCCCCCCHHHHHHHHHHHHHHHHHHhCCeEEE
Confidence 3467888877664 23788998841 111 11 1 1145778899999987665
No 450
>TIGR01768 GGGP-family geranylgeranylglyceryl phosphate synthase family protein. This model represents a family of sequences including geranylgeranylglyceryl phosphate synthase which catalyzes the first committed step in the synthesis of ether-linked membrane lipids in archaea. The clade of bacterial sequences may have the same function or a closely related function. This model supercedes TIGR00265, which has been retired.
Probab=40.43 E-value=80 Score=26.69 Aligned_cols=46 Identities=9% Similarity=0.027 Sum_probs=34.8
Q ss_pred CCHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEE
Q 022564 182 IDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 228 (295)
Q Consensus 182 id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~viv 228 (295)
...+.+++..+. .|.+|+++.|..-+...+.++.+.++++.++++.
T Consensus 15 ~~~~~~~~~~~~-gtdai~vGGS~~vt~~~~~~~v~~ik~~~lPvil 60 (223)
T TIGR01768 15 EADEIAKAAAES-GTDAILIGGSQGVTYEKTDTLIEALRRYGLPIIL 60 (223)
T ss_pred ccHHHHHHHHhc-CCCEEEEcCCCcccHHHHHHHHHHHhccCCCEEE
Confidence 455666665555 8999999866655556788999999999988876
No 451
>PRK15452 putative protease; Provisional
Probab=40.38 E-value=66 Score=30.27 Aligned_cols=10 Identities=10% Similarity=0.199 Sum_probs=5.1
Q ss_pred CCHHHHHHHH
Q 022564 182 IDYDQLEKSA 191 (295)
Q Consensus 182 id~e~l~~~i 191 (295)
++.+++++++
T Consensus 43 f~~edl~eav 52 (443)
T PRK15452 43 FNHENLALGI 52 (443)
T ss_pred CCHHHHHHHH
Confidence 3445555544
No 452
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=40.36 E-value=29 Score=29.83 Aligned_cols=25 Identities=16% Similarity=0.124 Sum_probs=22.6
Q ss_pred CHHHHHHHHHHcCCEEEEEcccccc
Q 022564 211 DYERIRKVCNKQKAIMLADMAHISG 235 (295)
Q Consensus 211 ~l~~I~~ia~~~~~~vivD~a~~~g 235 (295)
+.+++.++++++++-+++|++|=+.
T Consensus 54 ~~~~l~~~l~~~~i~~vIDATHPfA 78 (249)
T PF02571_consen 54 DEEGLAEFLRENGIDAVIDATHPFA 78 (249)
T ss_pred CHHHHHHHHHhCCCcEEEECCCchH
Confidence 7899999999999999999998543
No 453
>cd05560 Xcc1710_like Xcc1710_like family, specific to proteobacteria. Xcc1710 is a hypothetical protein from Xanthomonas campestris pv. campestris str. ATCC 33913, similar to Mth938, a hypothetical protein encoded by the Methanobacterium thermoautotrophicum (Mth) genome. Their three-dimensional structures have been determined, but their functions are unknown.
Probab=40.18 E-value=1.2e+02 Score=22.41 Aligned_cols=49 Identities=12% Similarity=0.063 Sum_probs=35.7
Q ss_pred CCCHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEcc
Q 022564 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 181 ~id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
.++.++++..+.. ++.+|+++.-...... -.++.+.++++|+-+-+-.+
T Consensus 39 ~l~~e~l~~l~~~-~peiliiGTG~~~~~~-~~~~~~~l~~~gi~vE~m~T 87 (109)
T cd05560 39 DLTAAHFEALLAL-QPEVILLGTGERQRFP-PPALLAPLLARGIGVEVMDT 87 (109)
T ss_pred cCCHHHHHHHHhc-CCCEEEEecCCCCCcC-CHHHHHHHHHcCCeEEEECH
Confidence 6889999988876 7898888744444333 47788888999987665444
No 454
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=39.88 E-value=98 Score=25.88 Aligned_cols=51 Identities=14% Similarity=0.171 Sum_probs=38.7
Q ss_pred CCCHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHc--CCEEEEEcc
Q 022564 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQ--KAIMLADMA 231 (295)
Q Consensus 181 ~id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~--~~~vivD~a 231 (295)
.+.++++.+.+.+.++.+|.++...+.....++++.+..++. ++.|++=++
T Consensus 125 ~vp~e~~v~~~~~~~~~~V~lS~~~~~~~~~~~~~i~~L~~~~~~~~i~vGG~ 177 (213)
T cd02069 125 MVPIEKILEAAKEHKADIIGLSGLLVPSLDEMVEVAEEMNRRGIKIPLLIGGA 177 (213)
T ss_pred CCCHHHHHHHHHHcCCCEEEEccchhccHHHHHHHHHHHHhcCCCCeEEEECh
Confidence 467888988888879999999866666677788888877776 466666554
No 455
>COG0352 ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
Probab=39.54 E-value=60 Score=27.19 Aligned_cols=47 Identities=13% Similarity=0.130 Sum_probs=33.7
Q ss_pred HHHHHHHHhhcCCcEEEEcCCCC-C--CccCHHHHHHHHHHcCCEEEEEcc
Q 022564 184 YDQLEKSATLFRPKLIVAGASAY-A--RLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 184 ~e~l~~~i~~~~tk~i~l~~~n~-~--~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
++.++++++. ..+++-+=.-+. . ...-.+++.++|++|++.++++.-
T Consensus 24 ~~~ve~al~~-Gv~~vQlR~K~~~~~~~~~~a~~~~~lc~~~~v~liINd~ 73 (211)
T COG0352 24 LEWVEAALKG-GVTAVQLREKDLSDEEYLALAEKLRALCQKYGVPLIINDR 73 (211)
T ss_pred HHHHHHHHhC-CCeEEEEecCCCChHHHHHHHHHHHHHHHHhCCeEEecCc
Confidence 7999999986 777777732222 2 234467899999999998877543
No 456
>PF14639 YqgF: Holliday-junction resolvase-like of SPT6 ; PDB: 3PSI_A 3PSF_A.
Probab=39.38 E-value=36 Score=26.81 Aligned_cols=43 Identities=19% Similarity=0.342 Sum_probs=26.5
Q ss_pred CCCHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcC
Q 022564 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQK 223 (295)
Q Consensus 181 ~id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~ 223 (295)
.-|.+.|.+.+.+++|.+|.++..+.....-.+.|.++.+++.
T Consensus 49 ~~~~~~l~~~i~~~kP~vI~v~g~~~~s~~l~~~v~~~v~~~~ 91 (150)
T PF14639_consen 49 EEDMERLKKFIEKHKPDVIAVGGNSRESRKLYDDVRDIVEELD 91 (150)
T ss_dssp HHHHHHHHHHHHHH--SEEEE--SSTHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHHHHHHHhh
Confidence 3466778888888899999996544434444566777776654
No 457
>PF03652 UPF0081: Uncharacterised protein family (UPF0081); InterPro: IPR005227 Holliday junction resolvases (HJRs) are key enzymes of DNA recombination. The principal HJRs are now known or confidently predicted for all bacteria and archaea whose genomes have been completely sequenced, with many species encoding multiple potential HJRs. Structural and evolutionary relationships of HJRs and related nucleases suggests that the HJR function has evolved independently from at least four distinct structural folds, namely RNase H, endonuclease, endonuclease VII-colicin E and RusA (IPR008822 from INTERPRO): The endonuclease fold, whose structural prototypes are the phage exonuclease, the very short patch repair nuclease (Vsr) and type II restriction enzymes, is shown to encompass by far a greater diversity of nucleases than previously suspected. This fold unifies archaeal HJRs (IPR002732 from INTERPRO), repair nucleases such as RecB (IPR004586 from INTERPRO) and Vsr (IPR004603 from INTERPRO), restriction enzymes and a variety of predicted nucleases whose specific activities remain to be determined. The RNase H fold characterises the RuvC family (IPR002176 from INTERPRO), which is nearly ubiquitous in bacteria, and in addition the YqgF family (IPR005227 from INTERPRO). The proteins of this family, typified by Escherichia coli YqgF, are likely to function as an alternative to RuvC in most bacteria, but could be the principal HJRs in low-GC Gram-positive bacteria and Aquifex. Endonuclease VII of phage T4 (IPR004211 from INTERPRO) is shown to serve as a structural template for many nucleases, including McrA and other type II restriction enzymes. Together with colicin E7, endonuclease VII defines a distinct metal-dependent nuclease fold. Horizontal gene transfer, lineage-specific gene loss and gene family expansion, and non-orthologous gene displacement seem to have been major forces in the evolution of HJRs and related nucleases. A remarkable case of displacement is seen in the Lyme disease spirochete Borrelia burgdorferi, which does not possess any of the typical HJRs, but instead encodes, in its chromosome and each of the linear plasmids, members of the exonuclease family predicted to function as HJRs. The diversity of HJRs and related nucleases in bacteria and archaea contrasts with their near absence in eukaryotes. The few detected eukaryotic representatives of the endonuclease fold and the RNase H fold have probably been acquired from bacteria via horizontal gene transfer. The identity of the principal HJR(s) involved in recombination in eukaryotes remains uncertain; this function could be performed by topoisomerase IB or by a novel, so far undetected, class of enzymes. Likely HJRs and related nucleases were identified in the genomes of numerous bacterial and eukaryotic DNA viruses. Gene flow between viral and cellular genomes has probably played a major role in the evolution of this class of enzymes. This family represents the YqgF family of putative Holliday junction resolvases. With the exception of the spirochetes, the YqgF family is represented in all bacterial lineages, including the mycoplasmas with their highly degenerate genomes. The RuvC resolvases are conspicuously absent in the low-GC Gram-positive bacterial lineage, with the exception of Ureaplasma parvum (Ureaplasma urealyticum biotype 1) (Q9PQY7 from SWISSPROT, []). Furthermore, loss of function ruvC mutants of E. coli show a residual HJR activity that cannot be ascribed to the prophage-encoded RusA resolvase []. This suggests that the YqgF family proteins could be alternative HJRs whose function partially overlaps with that of RuvC [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006281 DNA repair, 0006310 DNA recombination, 0006974 response to DNA damage stimulus, 0005737 cytoplasm; PDB: 1NU0_A 1OVQ_A 1NMN_B 1VHX_B 1IV0_A.
Probab=39.33 E-value=1.1e+02 Score=23.48 Aligned_cols=55 Identities=15% Similarity=0.112 Sum_probs=36.0
Q ss_pred CCCCCHHHHHHHHhhcCCcEEEEc-CCCC-CCcc----CHHHHH-HHHHHc-CCE-EEEEcccc
Q 022564 179 TGYIDYDQLEKSATLFRPKLIVAG-ASAY-ARLY----DYERIR-KVCNKQ-KAI-MLADMAHI 233 (295)
Q Consensus 179 ~~~id~e~l~~~i~~~~tk~i~l~-~~n~-~~~~----~l~~I~-~ia~~~-~~~-vivD~a~~ 233 (295)
+...+++.|.+.+++.++..++++ +.+. |... .+.+.+ +++++. ++. .++|+..+
T Consensus 35 ~~~~~~~~l~~li~~~~i~~iVvGlP~~~~G~~~~~~~~v~~f~~~L~~~~~~ipV~~~DEr~T 98 (135)
T PF03652_consen 35 NREKDIEELKKLIEEYQIDGIVVGLPLNMDGSESEQARRVRKFAEELKKRFPGIPVILVDERLT 98 (135)
T ss_dssp CCCCCHHHHHHHHHHCCECEEEEEEEBBCTSSC-CCHHHHHHHHHHHHHHH-TSEEEEEECSCS
T ss_pred CCchHHHHHHHHHHHhCCCEEEEeCCcccCCCccHHHHHHHHHHHHHHHhcCCCcEEEECCChh
Confidence 347799999999998889999997 3333 4322 233333 334444 875 56999854
No 458
>PLN00125 Succinyl-CoA ligase [GDP-forming] subunit alpha
Probab=38.86 E-value=72 Score=28.29 Aligned_cols=47 Identities=6% Similarity=-0.007 Sum_probs=31.1
Q ss_pred HHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEcc
Q 022564 184 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 184 ~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
++.++++.+. .++.+++-.+.++...-.+.+.++|+++|+.++==++
T Consensus 83 ~~al~e~~~~-Gvk~~vIisaGf~e~g~~~~~~~~ar~~girviGPNc 129 (300)
T PLN00125 83 AAAILEAMEA-ELDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNC 129 (300)
T ss_pred HHHHHHHHHc-CCCEEEEECCCCCcccHHHHHHHHHhhcCCEEECCCC
Confidence 5667777765 8888777655555332234556679999988874444
No 459
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=38.10 E-value=75 Score=27.37 Aligned_cols=27 Identities=15% Similarity=0.144 Sum_probs=21.5
Q ss_pred CccCHHHHHHHHHHcCCEEEEEccccc
Q 022564 208 RLYDYERIRKVCNKQKAIMLADMAHIS 234 (295)
Q Consensus 208 ~~~~l~~I~~ia~~~~~~vivD~a~~~ 234 (295)
...+.+.+.++.+++++-+++|++|=.
T Consensus 51 G~l~~e~l~~~l~e~~i~llIDATHPy 77 (257)
T COG2099 51 GFLGAEGLAAFLREEGIDLLIDATHPY 77 (257)
T ss_pred CcCCHHHHHHHHHHcCCCEEEECCChH
Confidence 344678889999999999999998743
No 460
>PRK04169 geranylgeranylglyceryl phosphate synthase-like protein; Reviewed
Probab=37.64 E-value=91 Score=26.53 Aligned_cols=52 Identities=13% Similarity=0.130 Sum_probs=36.3
Q ss_pred cCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEE
Q 022564 175 LNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 228 (295)
Q Consensus 175 ~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~viv 228 (295)
+||+ ...+-+.+++.... .|.+|+++.|..-+...+.++.+.+++++++++.
T Consensus 14 iDP~-k~~~~~~~~~~~~~-gtdai~vGGS~~vt~~~~~~~v~~ik~~~lPvil 65 (232)
T PRK04169 14 LDPD-KPLPDEALEAICES-GTDAIIVGGSDGVTEENVDELVKAIKEYDLPVIL 65 (232)
T ss_pred ECCC-CCCCHHHHHHHHhc-CCCEEEEcCCCccchHHHHHHHHHHhcCCCCEEE
Confidence 5643 34455666655555 8999999866644556688888888888888776
No 461
>PRK06683 hypothetical protein; Provisional
Probab=37.63 E-value=78 Score=22.05 Aligned_cols=45 Identities=9% Similarity=-0.099 Sum_probs=30.0
Q ss_pred HHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEcc
Q 022564 185 DQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 185 e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
++..+.++..+.++|++..... ..-.+.|.++|+.++++++.-.+
T Consensus 17 ~~v~kaik~gkaklViiA~Da~--~~~~~~i~~~~~~~~Vpv~~~~t 61 (82)
T PRK06683 17 KRTLEAIKNGIVKEVVIAEDAD--MRLTHVIIRTALQHNIPITKVES 61 (82)
T ss_pred HHHHHHHHcCCeeEEEEECCCC--HHHHHHHHHHHHhcCCCEEEECC
Confidence 4566677655789998842111 11367888999999998765443
No 462
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=37.31 E-value=95 Score=25.52 Aligned_cols=51 Identities=8% Similarity=0.122 Sum_probs=39.0
Q ss_pred CCCHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHc----CCEEEEEcc
Q 022564 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQ----KAIMLADMA 231 (295)
Q Consensus 181 ~id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~----~~~vivD~a 231 (295)
.+..+++.+.+.+.++.+|.++.+.......+.++.+..++. ++.|++=+.
T Consensus 119 ~~p~~~l~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~lr~~~~~~~~~i~vGG~ 173 (201)
T cd02070 119 DVPPEEFVEAVKEHKPDILGLSALMTTTMGGMKEVIEALKEAGLRDKVKVMVGGA 173 (201)
T ss_pred CCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHCCCCcCCeEEEECC
Confidence 457888988888779999999866666667788888888776 456777665
No 463
>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]
Probab=37.05 E-value=2.2e+02 Score=25.39 Aligned_cols=98 Identities=12% Similarity=0.123 Sum_probs=52.8
Q ss_pred EEeCCChH--HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhh
Q 022564 116 VQSLSGSP--SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL 193 (295)
Q Consensus 116 v~~~sG~~--a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~ 193 (295)
|...-|++ .-..++.-+.+-|..|+++--........ ....|-.-.+++.+.+ .-|.|.|+++++.
T Consensus 63 VaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~--------lkvmGdLGQvl~~~fd----~~DedSIr~vvk~ 130 (391)
T KOG2865|consen 63 VATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRH--------LKVMGDLGQVLFMKFD----LRDEDSIRAVVKH 130 (391)
T ss_pred EEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhh--------eeecccccceeeeccC----CCCHHHHHHHHHh
Confidence 44445666 22237788889999999874222211111 1123322233443443 4588999998875
Q ss_pred cCCcEEEEc---CCCCC-----CccCHHHHHHHHHHcCCE
Q 022564 194 FRPKLIVAG---ASAYA-----RLYDYERIRKVCNKQKAI 225 (295)
Q Consensus 194 ~~tk~i~l~---~~n~~-----~~~~l~~I~~ia~~~~~~ 225 (295)
.+.-+=+++ .+-|- ...--++|+.+|++-|+-
T Consensus 131 sNVVINLIGrd~eTknf~f~Dvn~~~aerlAricke~GVe 170 (391)
T KOG2865|consen 131 SNVVINLIGRDYETKNFSFEDVNVHIAERLARICKEAGVE 170 (391)
T ss_pred CcEEEEeeccccccCCcccccccchHHHHHHHHHHhhChh
Confidence 232222332 22221 122256999999999874
No 464
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=36.79 E-value=94 Score=23.78 Aligned_cols=48 Identities=13% Similarity=0.092 Sum_probs=33.9
Q ss_pred CCHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcC---CEEEEE
Q 022564 182 IDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQK---AIMLAD 229 (295)
Q Consensus 182 id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~---~~vivD 229 (295)
.+++++.++..+.++.+|.+|.........++++.+..++.+ +.+++=
T Consensus 40 ~s~e~~v~aa~e~~adii~iSsl~~~~~~~~~~~~~~L~~~g~~~i~vivG 90 (132)
T TIGR00640 40 QTPEEIARQAVEADVHVVGVSSLAGGHLTLVPALRKELDKLGRPDILVVVG 90 (132)
T ss_pred CCHHHHHHHHHHcCCCEEEEcCchhhhHHHHHHHHHHHHhcCCCCCEEEEe
Confidence 467777666655589999998655556666888888888864 566663
No 465
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=36.54 E-value=40 Score=33.13 Aligned_cols=30 Identities=13% Similarity=0.220 Sum_probs=26.4
Q ss_pred CCCCCCccCHHHHHHHHHHcCCEEEEEccc
Q 022564 203 ASAYARLYDYERIRKVCNKQKAIMLADMAH 232 (295)
Q Consensus 203 ~~n~~~~~~l~~I~~ia~~~~~~vivD~a~ 232 (295)
.+-+|+..+++++++-||++|+-||+|-..
T Consensus 207 ~sryGtPedfk~fVD~aH~~GIgViLD~V~ 236 (628)
T COG0296 207 TSRYGTPEDFKALVDAAHQAGIGVILDWVP 236 (628)
T ss_pred cccCCCHHHHHHHHHHHHHcCCEEEEEecC
Confidence 455568889999999999999999999984
No 466
>cd03319 L-Ala-DL-Glu_epimerase L-Ala-D/L-Glu epimerase catalyzes the epimerization of L-Ala-D/L-Glu and other dipeptides. The genomic context and the substrate specificity of characterized members of this family from E.coli and B.subtilis indicates a possible role in the metabolism of the murein peptide of peptidoglycan, of which L-Ala-D-Glu is a component. L-Ala-D/L-Glu epimerase is a member of the enolase-superfamily, which is characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion.
Probab=36.34 E-value=75 Score=28.12 Aligned_cols=50 Identities=10% Similarity=-0.075 Sum_probs=39.5
Q ss_pred CCCCHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEE
Q 022564 180 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (295)
Q Consensus 180 ~~id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD 229 (295)
...+++++++.++.....++.+..+..|.+.+..+++++|+++|+.++.=
T Consensus 236 ~~~~~~~~~~~~~~~~~d~v~~~~~~~GGi~~~~~~~~~a~~~gi~~~~~ 285 (316)
T cd03319 236 SCFSAADAARLAGGGAYDGINIKLMKTGGLTEALRIADLARAAGLKVMVG 285 (316)
T ss_pred CCCCHHHHHHHHhcCCCCEEEEeccccCCHHHHHHHHHHHHHcCCCEEEE
Confidence 35678888888875456677777777788888999999999999977764
No 467
>PRK01018 50S ribosomal protein L30e; Reviewed
Probab=36.31 E-value=86 Score=22.64 Aligned_cols=43 Identities=14% Similarity=0.054 Sum_probs=29.0
Q ss_pred HHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEE
Q 022564 185 DQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (295)
Q Consensus 185 e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD 229 (295)
.+..+.++..+.++|++... .+ ..-.+.+..+|++++++++.-
T Consensus 22 ~~v~kai~~gkaklViiA~D-~~-~~~~~~i~~~c~~~~Ip~~~~ 64 (99)
T PRK01018 22 KRTIKAIKLGKAKLVIVASN-CP-KDIKEDIEYYAKLSGIPVYEY 64 (99)
T ss_pred HHHHHHHHcCCceEEEEeCC-CC-HHHHHHHHHHHHHcCCCEEEE
Confidence 45666776557888888522 22 133578889999999987553
No 468
>PF07905 PucR: Purine catabolism regulatory protein-like family; InterPro: IPR012914 This domain is found in the purine catabolism regulatory protein expressed by Bacillus subtilis (PucR, O32138 from SWISSPROT). PucR is thought to be a transcriptional regulator of genes involved in the purine degradation pathway, and may contain a LysR-like DNA-binding domain. It is similar to LysR-type regulators in that it represses its own expression []. The other members of this family are also putative regulatory proteins.
Probab=36.25 E-value=1.2e+02 Score=22.59 Aligned_cols=39 Identities=8% Similarity=0.023 Sum_probs=25.2
Q ss_pred HHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEE
Q 022564 189 KSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 228 (295)
Q Consensus 189 ~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~viv 228 (295)
+.+.+.++.++.+...-+....| +++.+.|++++++++.
T Consensus 66 ~~L~~~~~agL~i~~~~~~~~iP-~~~i~~A~~~~lPli~ 104 (123)
T PF07905_consen 66 RELAEKGAAGLGIKTGRYLDEIP-EEIIELADELGLPLIE 104 (123)
T ss_pred HHHHHCCCeEEEEeccCccccCC-HHHHHHHHHcCCCEEE
Confidence 33334477888875332222333 7899999999998774
No 469
>COG1646 Predicted phosphate-binding enzymes, TIM-barrel fold [General function prediction only]
Probab=36.13 E-value=1.9e+02 Score=24.69 Aligned_cols=56 Identities=9% Similarity=0.035 Sum_probs=34.9
Q ss_pred cCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHH-HcCCEEEEEcc
Q 022564 175 LNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCN-KQKAIMLADMA 231 (295)
Q Consensus 175 ~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~-~~~~~vivD~a 231 (295)
+||+.-...-+.++++... .|.+|+++.|..-....+.++.+-++ +++++++.=-.
T Consensus 22 iDP~k~~~~~ei~~~~~~~-GTDaImIGGS~gvt~~~~~~~v~~ik~~~~lPvilfP~ 78 (240)
T COG1646 22 IDPDKTEEADEIAEAAAEA-GTDAIMIGGSDGVTEENVDNVVEAIKERTDLPVILFPG 78 (240)
T ss_pred eCcccccccHHHHHHHHHc-CCCEEEECCcccccHHHHHHHHHHHHhhcCCCEEEecC
Confidence 4543323344444555544 89999998665444455666666666 88988876544
No 470
>PRK05678 succinyl-CoA synthetase subunit alpha; Validated
Probab=36.10 E-value=79 Score=27.89 Aligned_cols=46 Identities=13% Similarity=0.181 Sum_probs=31.2
Q ss_pred HHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEcc
Q 022564 184 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 184 ~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
++.++++.+. ++|.+++-.+.++ ..+-++|.++|+++|+.++==++
T Consensus 79 ~~~l~e~~~~-gvk~avI~s~Gf~-~~~~~~l~~~a~~~girvlGPNc 124 (291)
T PRK05678 79 ADAILEAIDA-GIDLIVCITEGIP-VLDMLEVKAYLERKKTRLIGPNC 124 (291)
T ss_pred HHHHHHHHHC-CCCEEEEECCCCC-HHHHHHHHHHHHHcCCEEECCCC
Confidence 5667777765 7887766444443 23335899999999998884444
No 471
>TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit. ATP citrate lyases appear to form an outgroup.
Probab=36.01 E-value=80 Score=27.80 Aligned_cols=51 Identities=12% Similarity=0.204 Sum_probs=33.9
Q ss_pred HHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEccccccccc
Q 022564 184 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVA 238 (295)
Q Consensus 184 ~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~ 238 (295)
++.++++.+. .+|.+++-.+.++.. +-++|.++|+++|+.++==++ .|.+.
T Consensus 77 ~~~l~e~~~~-Gvk~avIis~Gf~e~-~~~~l~~~a~~~girilGPNc--~Giin 127 (286)
T TIGR01019 77 ADAIFEAIDA-GIELIVCITEGIPVH-DMLKVKRYMEESGTRLIGPNC--PGIIT 127 (286)
T ss_pred HHHHHHHHHC-CCCEEEEECCCCCHH-HHHHHHHHHHHcCCEEECCCC--ceEEc
Confidence 5666776665 788776644444422 347999999999998884444 45443
No 472
>TIGR00272 DPH2 diphthamide biosynthesis protein 2. This protein has been shown in Saccharomyces cerevisiae to be one of several required for the modification of a particular histidine residue of translation elongation factor 2 to diphthamide. This modified site can then become the target for ADP-ribosylation by diphtheria toxin.
Probab=35.57 E-value=1e+02 Score=29.42 Aligned_cols=77 Identities=17% Similarity=0.071 Sum_probs=51.7
Q ss_pred CCCHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHH------cCCEEEEEcccccccccc-CCCCCCCCcceEEE
Q 022564 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNK------QKAIMLADMAHISGLVAA-GVIPSPFEYADVVT 253 (295)
Q Consensus 181 ~id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~------~~~~vivD~a~~~g~~~~-~~~~~~~~~~D~~~ 253 (295)
.++++.+.+.|++.+.+-|.+..|- +-..+-.+|+++.++ ..++|+-|-++++-.++. ...+.. +|+++
T Consensus 36 ~yei~~~~~~I~~~~~krVaLQFPD-gLL~~a~~va~~L~~~~~~~~~~v~IlaDtsYGaCCVDevaA~hv~---aD~iV 111 (496)
T TIGR00272 36 YYEIEPTVGYIKQGNEYQVALQFPD-DLLKDSSKVVRLLQSKFPHGKIKFWVLADTAYSSCCVDEVAAEHVH---AEAVV 111 (496)
T ss_pred HhhHHHHHHHHHHCCCCEEEEECCh-HHHHHHHHHHHHHHhhcccCCceEEEEeCCcccccccCHHHHhhcC---CCEEE
Confidence 3456666667776566777776443 334445566666655 578899999977666643 222333 99999
Q ss_pred eCCCCCCC
Q 022564 254 TTTHKSLR 261 (295)
Q Consensus 254 ~s~~K~l~ 261 (295)
.-+|-+|.
T Consensus 112 HyGhsCLs 119 (496)
T TIGR00272 112 HFGDACLS 119 (496)
T ss_pred EeCCCCCC
Confidence 99999886
No 473
>PF14871 GHL6: Hypothetical glycosyl hydrolase 6
Probab=34.96 E-value=1.7e+02 Score=22.38 Aligned_cols=46 Identities=11% Similarity=-0.013 Sum_probs=28.1
Q ss_pred CHHHHHHHHhhcCCcEEEEc-C--------------CCCC-CccCHHHHHHHHHHcCCEEEE
Q 022564 183 DYDQLEKSATLFRPKLIVAG-A--------------SAYA-RLYDYERIRKVCNKQKAIMLA 228 (295)
Q Consensus 183 d~e~l~~~i~~~~tk~i~l~-~--------------~n~~-~~~~l~~I~~ia~~~~~~viv 228 (295)
|++++.+.+++-+...+++. . .+++ ....+.++.+.||+.|+-+++
T Consensus 1 D~~~~~~~lk~~~v~si~i~a~~h~g~ayYPt~~~~~hp~L~~Dllge~v~a~h~~Girv~a 62 (132)
T PF14871_consen 1 DPEQFVDTLKEAHVNSITIFAKCHGGYAYYPTKVGPRHPGLKRDLLGEQVEACHERGIRVPA 62 (132)
T ss_pred CHHHHHHHHHHhCCCEEEEEcccccEEEEccCCCCcCCCCCCcCHHHHHHHHHHHCCCEEEE
Confidence 56667676665455555441 1 1111 334578999999999986653
No 474
>COG2877 KdsA 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase [Cell envelope biogenesis, outer membrane]
Probab=34.89 E-value=68 Score=27.36 Aligned_cols=40 Identities=15% Similarity=0.275 Sum_probs=26.2
Q ss_pred CCcEEEEc-CCCCC---CccCHHHHHHHHHHcCCEEEEEcccccc
Q 022564 195 RPKLIVAG-ASAYA---RLYDYERIRKVCNKQKAIMLADMAHISG 235 (295)
Q Consensus 195 ~tk~i~l~-~~n~~---~~~~l~~I~~ia~~~~~~vivD~a~~~g 235 (295)
+.++++.. .+++| -+.|+..+ .+.++.+++||.|++|+.-
T Consensus 159 n~~v~lcERG~sFGYnnLV~DMrsl-~iM~~~~~PViFDaTHSvQ 202 (279)
T COG2877 159 NNKVILCERGASFGYNNLVVDMRSL-PIMKEFGAPVIFDATHSVQ 202 (279)
T ss_pred CCcEEEEeccCccCcchhHHHhhhh-HHHHHcCCCeEEeccccee
Confidence 44544442 66666 34455444 3678889999999999853
No 475
>PRK08673 3-deoxy-7-phosphoheptulonate synthase; Reviewed
Probab=34.54 E-value=1.4e+02 Score=26.89 Aligned_cols=56 Identities=13% Similarity=0.205 Sum_probs=38.3
Q ss_pred CCCHHHHHHHHhh----cCCcEEEE-c-CCCC-C---CccCHHHHHHHHHHcCCEEEEEccccccc
Q 022564 181 YIDYDQLEKSATL----FRPKLIVA-G-ASAY-A---RLYDYERIRKVCNKQKAIMLADMAHISGL 236 (295)
Q Consensus 181 ~id~e~l~~~i~~----~~tk~i~l-~-~~n~-~---~~~~l~~I~~ia~~~~~~vivD~a~~~g~ 236 (295)
..+++++..+.+. -+..++++ + .+++ + ...++..|..+-+..+++|++|..|+.|.
T Consensus 210 ~~ti~E~l~A~e~i~~~GN~~viL~erG~~tf~~~~~~~ldl~ai~~lk~~~~lPVi~d~sH~~G~ 275 (335)
T PRK08673 210 SATIEEWLMAAEYILAEGNPNVILCERGIRTFETATRNTLDLSAVPVIKKLTHLPVIVDPSHATGK 275 (335)
T ss_pred CCCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCcChhhhhHHHHHHHHHhcCCCEEEeCCCCCcc
Confidence 4477777766542 14455555 2 3244 2 56678888888877899999999999875
No 476
>COG1435 Tdk Thymidine kinase [Nucleotide transport and metabolism]
Probab=34.13 E-value=2.7e+02 Score=23.08 Aligned_cols=89 Identities=3% Similarity=-0.013 Sum_probs=48.2
Q ss_pred HHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhc----CCcEEEEcC
Q 022564 128 VYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF----RPKLIVAGA 203 (295)
Q Consensus 128 ~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~----~tk~i~l~~ 203 (295)
.+....-.|-+|++..+....-+..... ....|.+...+.++ +..++-+.+... .+..|.+..
T Consensus 24 r~~~~~~~g~~v~vfkp~iD~R~~~~~V-----~Sr~G~~~~A~~i~--------~~~~i~~~i~~~~~~~~~~~v~IDE 90 (201)
T COG1435 24 RARRYKEAGMKVLVFKPAIDTRYGVGKV-----SSRIGLSSEAVVIP--------SDTDIFDEIAALHEKPPVDCVLIDE 90 (201)
T ss_pred HHHHHHHcCCeEEEEeccccccccccee-----eeccCCcccceecC--------ChHHHHHHHHhcccCCCcCEEEEeh
Confidence 4444556788888888655544332221 11233333333322 223333333321 256788875
Q ss_pred CCCCCccCHHHHHHHHHHcCCEEEEE
Q 022564 204 SAYARLYDYERIRKVCNKQKAIMLAD 229 (295)
Q Consensus 204 ~n~~~~~~l~~I~~ia~~~~~~vivD 229 (295)
..+-...-+..+.+++.+.|+.|++=
T Consensus 91 aQF~~~~~v~~l~~lad~lgi~Vi~~ 116 (201)
T COG1435 91 AQFFDEELVYVLNELADRLGIPVICY 116 (201)
T ss_pred hHhCCHHHHHHHHHHHhhcCCEEEEe
Confidence 55544455778888888889998863
No 477
>cd03315 MLE_like Muconate lactonizing enzyme (MLE) like subgroup of the enolase superfamily. Enzymes of this subgroup share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and residues that can function as general acid/base catalysts, a Lys-X-Lys motif and another conserved lysine. Despite these conserved residues, the members of the MLE subgroup, like muconate lactonizing enzyme, o-succinylbenzoate synthase (OSBS) and N-acylamino acid racemase (NAAAR), catalyze different reactions.
Probab=34.00 E-value=1.1e+02 Score=26.35 Aligned_cols=51 Identities=8% Similarity=-0.006 Sum_probs=40.6
Q ss_pred CCCCHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEc
Q 022564 180 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 230 (295)
Q Consensus 180 ~~id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~ 230 (295)
...+++++++.++.....++.+.....|.+.+..+++++|+++|+.++.-+
T Consensus 188 ~~~~~~~~~~~i~~~~~d~v~~k~~~~GGi~~~~~~~~~A~~~gi~~~~~~ 238 (265)
T cd03315 188 SAFTPHDAFRELALGAADAVNIKTAKTGGLTKAQRVLAVAEALGLPVMVGS 238 (265)
T ss_pred CCCCHHHHHHHHHhCCCCEEEEecccccCHHHHHHHHHHHHHcCCcEEecC
Confidence 356788999888764567777777777888889999999999999877643
No 478
>PTZ00106 60S ribosomal protein L30; Provisional
Probab=33.82 E-value=90 Score=23.03 Aligned_cols=43 Identities=12% Similarity=-0.028 Sum_probs=28.9
Q ss_pred HHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEE
Q 022564 185 DQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (295)
Q Consensus 185 e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD 229 (295)
++..++++..+.++|++.... ...-.++|...|+.++++++..
T Consensus 31 ~~vlkalk~gkaklViiA~D~--~~~~kkki~~~~~~~~Vpv~~~ 73 (108)
T PTZ00106 31 KSTLKALRNGKAKLVIISNNC--PPIRRSEIEYYAMLSKTGVHHY 73 (108)
T ss_pred HHHHHHHHcCCeeEEEEeCCC--CHHHHHHHHHHHhhcCCCEEEe
Confidence 455666665478888884211 1123678889999999998764
No 479
>cd02065 B12-binding_like B12 binding domain (B12-BD). Most of the members bind different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide. This domain is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins. Not all members of this family contain the conserved binding motif.
Probab=33.63 E-value=1.4e+02 Score=21.78 Aligned_cols=54 Identities=7% Similarity=0.059 Sum_probs=36.9
Q ss_pred CCHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHc--CCEEEEEcccccc
Q 022564 182 IDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQ--KAIMLADMAHISG 235 (295)
Q Consensus 182 id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~--~~~vivD~a~~~g 235 (295)
...+++.+.+.+.++++|.++.........++.+.++.+++ ++.+++=+.+...
T Consensus 37 ~~~~~~~~~i~~~~pdiV~iS~~~~~~~~~~~~~~~~~~~~p~~~~ivvGG~~~t~ 92 (125)
T cd02065 37 VPPEEIVEAAKEEDADVVGLSALSTTHMEAMKLVIEALKELGIDIPVVVGGAHPTA 92 (125)
T ss_pred CCHHHHHHHHHHcCCCEEEEecchHhHHHHHHHHHHHHHhcCCCCeEEEeCCcCCc
Confidence 45666777776668999998744443345567777777777 4888888775443
No 480
>PTZ00314 inosine-5'-monophosphate dehydrogenase; Provisional
Probab=33.57 E-value=2.2e+02 Score=27.30 Aligned_cols=95 Identities=13% Similarity=0.099 Sum_probs=54.8
Q ss_pred HHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEc-CCC-
Q 022564 128 VYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA- 205 (295)
Q Consensus 128 ~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~-~~n- 205 (295)
.+.++++.|-.++..+..|+-........ + . +... +..+++-. ..-.+.++.+.+++. ....|.++ .+.
T Consensus 245 ~~~~l~~ag~d~i~id~a~G~s~~~~~~i-~-~--ik~~-~~~~~v~a---G~V~t~~~a~~~~~a-Gad~I~vg~g~Gs 315 (495)
T PTZ00314 245 RAAALIEAGVDVLVVDSSQGNSIYQIDMI-K-K--LKSN-YPHVDIIA---GNVVTADQAKNLIDA-GADGLRIGMGSGS 315 (495)
T ss_pred HHHHHHHCCCCEEEEecCCCCchHHHHHH-H-H--HHhh-CCCceEEE---CCcCCHHHHHHHHHc-CCCEEEECCcCCc
Confidence 56777888877888777655332111100 0 0 1110 00122111 235678888888876 78888763 221
Q ss_pred ---------C--CCccCHHHHHHHHHHcCCEEEEEcc
Q 022564 206 ---------Y--ARLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 206 ---------~--~~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
. |....+.++.++|+++++.+|.|+-
T Consensus 316 ~~~t~~~~~~g~p~~~ai~~~~~~~~~~~v~vIadGG 352 (495)
T PTZ00314 316 ICITQEVCAVGRPQASAVYHVARYARERGVPCIADGG 352 (495)
T ss_pred ccccchhccCCCChHHHHHHHHHHHhhcCCeEEecCC
Confidence 1 2334456788889999999999975
No 481
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=33.57 E-value=2.7e+02 Score=24.07 Aligned_cols=91 Identities=15% Similarity=0.143 Sum_probs=49.8
Q ss_pred eEEeCCChH-HHHHHHHhhc-CCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHh
Q 022564 115 NVQSLSGSP-SNFQVYTALL-KPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSAT 192 (295)
Q Consensus 115 ~v~~~sG~~-a~~~~~~al~-~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~ 192 (295)
.|.+-.|++ +.. +..-|. .+++.++.+.-.|++-+..-. .+.. ..+..+.|.+.+.++
T Consensus 4 ~ilvlGGT~Dar~-la~~L~~~~~~~~~ss~t~~g~~l~~~~----------------~~~~---~~G~l~~e~l~~~l~ 63 (257)
T COG2099 4 RILLLGGTSDARA-LAKKLAAAPVDIILSSLTGYGAKLAEQI----------------GPVR---VGGFLGAEGLAAFLR 63 (257)
T ss_pred eEEEEeccHHHHH-HHHHhhccCccEEEEEcccccccchhcc----------------CCee---ecCcCCHHHHHHHHH
Confidence 566667777 665 556663 456777776655554422110 1100 235778899999998
Q ss_pred hcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEE
Q 022564 193 LFRPKLIVAGASAYARLYDYERIRKVCNKQKAIM 226 (295)
Q Consensus 193 ~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~v 226 (295)
++++++|+ ..+|+-...=-+-..+.|++.|++.
T Consensus 64 e~~i~llI-DATHPyAa~iS~Na~~aake~gipy 96 (257)
T COG2099 64 EEGIDLLI-DATHPYAARISQNAARAAKETGIPY 96 (257)
T ss_pred HcCCCEEE-ECCChHHHHHHHHHHHHHHHhCCcE
Confidence 86766554 4444321111223455666666543
No 482
>COG0826 Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones]
Probab=33.08 E-value=96 Score=28.16 Aligned_cols=10 Identities=10% Similarity=0.348 Sum_probs=4.8
Q ss_pred CCHHHHHHHH
Q 022564 182 IDYDQLEKSA 191 (295)
Q Consensus 182 id~e~l~~~i 191 (295)
+..+++++.+
T Consensus 46 fs~~~l~e~i 55 (347)
T COG0826 46 FSVEDLAEAV 55 (347)
T ss_pred CCHHHHHHHH
Confidence 4445555544
No 483
>PRK05583 ribosomal protein L7Ae family protein; Provisional
Probab=32.78 E-value=1.2e+02 Score=22.21 Aligned_cols=44 Identities=16% Similarity=0.254 Sum_probs=29.0
Q ss_pred HHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEE
Q 022564 184 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (295)
Q Consensus 184 ~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD 229 (295)
.+.+++.++..+.++|++.. .....-.++|.+.|+.+++.++.-
T Consensus 22 ~~~v~~aik~gk~~lVI~A~--D~s~~~kkki~~~~~~~~vp~~~~ 65 (104)
T PRK05583 22 YNKCEEAIKKKKVYLIIISN--DISENSKNKFKNYCNKYNIPYIEG 65 (104)
T ss_pred HHHHHHHHHcCCceEEEEeC--CCCHhHHHHHHHHHHHcCCCEEEe
Confidence 35667777765778887741 111223678888999999887544
No 484
>TIGR00034 aroFGH phospho-2-dehydro-3-deoxyheptonate aldolase.
Probab=32.41 E-value=59 Score=29.35 Aligned_cols=29 Identities=17% Similarity=0.139 Sum_probs=23.2
Q ss_pred cCHHHHHHHHHHcCCE--EEEEccccccccc
Q 022564 210 YDYERIRKVCNKQKAI--MLADMAHISGLVA 238 (295)
Q Consensus 210 ~~l~~I~~ia~~~~~~--vivD~a~~~g~~~ 238 (295)
.++.++....++.++. |++|++|+.+.-.
T Consensus 239 ~di~~~~~~l~~~~lp~~vmVD~SH~ns~k~ 269 (344)
T TIGR00034 239 ADVAAAKKQLEKAGLPPHLMIDFSHGNSNKD 269 (344)
T ss_pred HHHHHHHHHHHHcCCCCeEEEeCCCcccccc
Confidence 5777878778888998 9999999866543
No 485
>PRK07315 fructose-bisphosphate aldolase; Provisional
Probab=32.38 E-value=98 Score=27.34 Aligned_cols=43 Identities=9% Similarity=0.050 Sum_probs=34.3
Q ss_pred CHHHHHHHHhhcCCcEEEEcCCCCCC---ccCHHHHHHHHHHcCCEE
Q 022564 183 DYDQLEKSATLFRPKLIVAGASAYAR---LYDYERIRKVCNKQKAIM 226 (295)
Q Consensus 183 d~e~l~~~i~~~~tk~i~l~~~n~~~---~~~l~~I~~ia~~~~~~v 226 (295)
|++.++++++. ....|.+..++.+. +.-.+++.++|+++|+.|
T Consensus 88 ~~~~i~~ai~~-GftSVm~d~S~l~~eEni~~t~~v~~~a~~~gv~v 133 (293)
T PRK07315 88 HYEDALECIEV-GYTSIMFDGSHLPVEENLKLAKEVVEKAHAKGISV 133 (293)
T ss_pred CHHHHHHHHHc-CCCEEEEcCCCCCHHHHHHHHHHHHHHHHHcCCEE
Confidence 78999999986 78888887677663 334558899999999988
No 486
>PF00289 CPSase_L_chain: Carbamoyl-phosphate synthase L chain, N-terminal domain; InterPro: IPR005481 Carbamoyl phosphate synthase (CPSase) is a heterodimeric enzyme composed of a small and a large subunit (with the exception of CPSase III, see below). CPSase catalyses the synthesis of carbamoyl phosphate from biocarbonate, ATP and glutamine (6.3.5.5 from EC) or ammonia (6.3.4.16 from EC), and represents the first committed step in pyrimidine and arginine biosynthesis in prokaryotes and eukaryotes, and in the urea cycle in most terrestrial vertebrates [, ]. CPSase has three active sites, one in the small subunit and two in the large subunit. The small subunit contains the glutamine binding site and catalyses the hydrolysis of glutamine to glutamate and ammonia. The large subunit has two homologous carboxy phosphate domains, both of which have ATP-binding sites; however, the N-terminal carboxy phosphate domain catalyses the phosphorylation of biocarbonate, while the C-terminal domain catalyses the phosphorylation of the carbamate intermediate []. The carboxy phosphate domain found duplicated in the large subunit of CPSase is also present as a single copy in the biotin-dependent enzymes acetyl-CoA carboxylase (6.4.1.2 from EC) (ACC), propionyl-CoA carboxylase (6.4.1.3 from EC) (PCCase), pyruvate carboxylase (6.4.1.1 from EC) (PC) and urea carboxylase (6.3.4.6 from EC). Most prokaryotes carry one form of CPSase that participates in both arginine and pyrimidine biosynthesis, however certain bacteria can have separate forms. The large subunit in bacterial CPSase has four structural domains: the carboxy phosphate domain 1, the oligomerisation domain, the carbamoyl phosphate domain 2 and the allosteric domain []. CPSase heterodimers from Escherichia coli contain two molecular tunnels: an ammonia tunnel and a carbamate tunnel. These inter-domain tunnels connect the three distinct active sites, and function as conduits for the transport of unstable reaction intermediates (ammonia and carbamate) between successive active sites []. The catalytic mechanism of CPSase involves the diffusion of carbamate through the interior of the enzyme from the site of synthesis within the N-terminal domain of the large subunit to the site of phosphorylation within the C-terminal domain. Eukaryotes have two distinct forms of CPSase: a mitochondrial enzyme (CPSase I) that participates in both arginine biosynthesis and the urea cycle; and a cytosolic enzyme (CPSase II) involved in pyrimidine biosynthesis. CPSase II occurs as part of a multi-enzyme complex along with aspartate transcarbamoylase and dihydroorotase; this complex is referred to as the CAD protein []. The hepatic expression of CPSase is transcriptionally regulated by glucocorticoids and/or cAMP []. There is a third form of the enzyme, CPSase III, found in fish, which uses glutamine as a nitrogen source instead of ammonia []. CPSase III is closely related to CPSase I, and is composed of a single polypeptide that may have arisen from gene fusion of the glutaminase and synthetase domains []. This entry represents the N-terminal domain of the large subunit of carbamoyl phosphate synthase. This domain can also be found in certain other related proteins. ; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 3VA7_A 3OUU_A 3OUZ_B 1W96_B 1W93_A 1ULZ_A 3HB9_C 3HO8_A 3BG5_C 3HBL_A ....
Probab=32.21 E-value=1.2e+02 Score=22.28 Aligned_cols=44 Identities=16% Similarity=0.320 Sum_probs=31.4
Q ss_pred CCCHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEE
Q 022564 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIML 227 (295)
Q Consensus 181 ~id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vi 227 (295)
-+|.+.+.+.+++....++ .+.++....-.++++.|++.|+.++
T Consensus 60 yl~~e~I~~ia~~~g~~~i---~pGyg~lse~~~fa~~~~~~gi~fi 103 (110)
T PF00289_consen 60 YLNIEAIIDIARKEGADAI---HPGYGFLSENAEFAEACEDAGIIFI 103 (110)
T ss_dssp TTSHHHHHHHHHHTTESEE---ESTSSTTTTHHHHHHHHHHTT-EES
T ss_pred hccHHHHhhHhhhhcCccc---ccccchhHHHHHHHHHHHHCCCEEE
Confidence 4799999998876332222 3667777778889999998888664
No 487
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=32.01 E-value=45 Score=28.66 Aligned_cols=25 Identities=12% Similarity=0.104 Sum_probs=22.5
Q ss_pred CHHHHHHHHHHcCCEEEEEcccccc
Q 022564 211 DYERIRKVCNKQKAIMLADMAHISG 235 (295)
Q Consensus 211 ~l~~I~~ia~~~~~~vivD~a~~~g 235 (295)
+.+.+.++++++++-+++|++|=+.
T Consensus 53 ~~~~l~~~l~~~~i~~VIDATHPfA 77 (248)
T PRK08057 53 GAEGLAAYLREEGIDLVIDATHPYA 77 (248)
T ss_pred CHHHHHHHHHHCCCCEEEECCCccH
Confidence 7899999999999999999998543
No 488
>TIGR01362 KDO8P_synth 3-deoxy-8-phosphooctulonate synthase. In Gram-negative bacteria, this is the first step in the biosynthesis of 3-deoxy-D-manno-octulosonate, part of the oligosaccharide core of lipopolysaccharide.
Probab=32.00 E-value=2.1e+02 Score=24.80 Aligned_cols=54 Identities=6% Similarity=0.155 Sum_probs=33.6
Q ss_pred CCCCCHHHHHHHHh----hcCCcEEEEc-CCCCC---CccCHHHHHHHHHHcCCEEEEEcccc
Q 022564 179 TGYIDYDQLEKSAT----LFRPKLIVAG-ASAYA---RLYDYERIRKVCNKQKAIMLADMAHI 233 (295)
Q Consensus 179 ~~~id~e~l~~~i~----~~~tk~i~l~-~~n~~---~~~~l~~I~~ia~~~~~~vivD~a~~ 233 (295)
.....++++..+++ .-+.++++.- ...++ ...|+..+.-+ ++.+++||+|.+|+
T Consensus 124 G~~~t~~e~l~aaeyi~~~Gn~~viLcERG~tf~y~r~~~D~~~ip~~-k~~~~PVi~DpSHs 185 (258)
T TIGR01362 124 GQFLSPWDMKNVVEKVLSTGNKNILLCERGTSFGYNNLVVDMRSLPIM-RELGCPVIFDATHS 185 (258)
T ss_pred CCcCCHHHHHHHHHHHHHcCCCcEEEEeCCCCcCCCCcccchhhhHHH-HhcCCCEEEeCCcc
Confidence 34567777655443 2255655552 33333 35677777755 44589999999998
No 489
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=31.78 E-value=68 Score=28.87 Aligned_cols=99 Identities=10% Similarity=0.120 Sum_probs=55.7
Q ss_pred CCHHHHHHHHhhcCCcEEEEc----CCCCC-CccCHHHHHHHHHHcC------CEEEEEccccccccccC-CCCCCCCcc
Q 022564 182 IDYDQLEKSATLFRPKLIVAG----ASAYA-RLYDYERIRKVCNKQK------AIMLADMAHISGLVAAG-VIPSPFEYA 249 (295)
Q Consensus 182 id~e~l~~~i~~~~tk~i~l~----~~n~~-~~~~l~~I~~ia~~~~------~~vivD~a~~~g~~~~~-~~~~~~~~~ 249 (295)
+-+++++.+..+ +..+|++. -+|.. -..+|++|.+++++.. ++++.|+..+-..+..- .+. ...+.
T Consensus 209 VafDAi~~Akar-~~DvvliDTAGRLhnk~nLM~EL~KI~rV~~k~~~~ap~e~llvlDAttGqnal~QAk~F~-eav~l 286 (340)
T COG0552 209 VAFDAIQAAKAR-GIDVVLIDTAGRLHNKKNLMDELKKIVRVIKKDDPDAPHEILLVLDATTGQNALSQAKIFN-EAVGL 286 (340)
T ss_pred HHHHHHHHHHHc-CCCEEEEeCcccccCchhHHHHHHHHHHHhccccCCCCceEEEEEEcccChhHHHHHHHHH-HhcCC
Confidence 456777877766 78888883 33333 5667889999998865 66777998443222210 011 01123
Q ss_pred eEEEeCCCCCCCCCceEEEEEeCCchhhhccCCeeEEEeE
Q 022564 250 DVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEFTCRCF 289 (295)
Q Consensus 250 D~~~~s~~K~l~gp~gG~l~~~~~~~~~~~~~~~~~~~~~ 289 (295)
|.++ ..|.=+..+||+++.=... -+.++.|.|+
T Consensus 287 ~GiI--lTKlDgtAKGG~il~I~~~-----l~~PI~fiGv 319 (340)
T COG0552 287 DGII--LTKLDGTAKGGIILSIAYE-----LGIPIKFIGV 319 (340)
T ss_pred ceEE--EEecccCCCcceeeeHHHH-----hCCCEEEEeC
Confidence 4332 2353356777666542221 2567777654
No 490
>COG2515 Acd 1-aminocyclopropane-1-carboxylate deaminase [Amino acid transport and metabolism]
Probab=31.72 E-value=3.8e+02 Score=23.96 Aligned_cols=47 Identities=23% Similarity=0.283 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEec
Q 022564 93 AESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALD 143 (295)
Q Consensus 93 l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~ 143 (295)
...++.++...++..|. +-+..++|+| |-+++-.+.+.++.+|+-.+
T Consensus 167 ~a~Ei~~Q~~~~~~fD~----vVva~gs~gT~AGl~~g~~~~~~~~~ViG~~ 214 (323)
T COG2515 167 LALEIAEQAEQLLKFDS----VVVAPGSGGTHAGLLVGLAQLGPDVEVIGID 214 (323)
T ss_pred HHHHHHHHHhhccCCCE----EEEeCCCcchHHHHHHHhhhccCCCceEEEe
Confidence 33345566665544443 2333344444 55545555566777776544
No 491
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=31.62 E-value=2.7e+02 Score=24.00 Aligned_cols=93 Identities=15% Similarity=0.116 Sum_probs=49.1
Q ss_pred eEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhh
Q 022564 115 NVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL 193 (295)
Q Consensus 115 ~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~ 193 (295)
.|++..|++ +.. +...+...|..|+.+.-.-.+-. .....| . .++. .+.+|.+.+++.+.+
T Consensus 2 ~ILvlGGT~egr~-la~~L~~~g~~v~~s~~t~~~~~---------~~~~~g--~--~~v~----~g~l~~~~l~~~l~~ 63 (256)
T TIGR00715 2 TVLLMGGTVDSRA-IAKGLIAQGIEILVTVTTSEGKH---------LYPIHQ--A--LTVH----TGALDPQELREFLKR 63 (256)
T ss_pred eEEEEechHHHHH-HHHHHHhCCCeEEEEEccCCccc---------cccccC--C--ceEE----ECCCCHHHHHHHHHh
Confidence 466667766 555 66677777877776652111110 000011 1 1111 246788889899987
Q ss_pred cCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEE
Q 022564 194 FRPKLIVAGASAYARLYDYERIRKVCNKQKAIM 226 (295)
Q Consensus 194 ~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~v 226 (295)
.++++|+ ..+++....=-+-+.+.|++.|+..
T Consensus 64 ~~i~~VI-DAtHPfA~~is~~a~~a~~~~~ipy 95 (256)
T TIGR00715 64 HSIDILV-DATHPFAAQITTNATAVCKELGIPY 95 (256)
T ss_pred cCCCEEE-EcCCHHHHHHHHHHHHHHHHhCCcE
Confidence 6777655 4344321111234557777776543
No 492
>TIGR00160 MGSA methylglyoxal synthase. Methylglyoxal synthase (MGS) generates methylglyoxal (MG), a toxic metabolite (that may also be a regulatory metabolite and) that is detoxified, prinicipally, through a pathway involving glutathione and glyoxylase I. Totemeyer, et al. (MUID:98149311) propose that, during a loss of control over carbon flux, with accumulation of phosphorylated sugars and depletion of phosphate, as might happen during a rapid shift to a richer medium, MGS aids the cell by converting some dihydroxyacetone phosphate (DHAP) to MG and phosphate. This is therefore an alternative to triosephosphate isomerase and the remainder of the glycolytic pathway for the disposal of DHAP during the stress of a sudden increase in available sugars.
Probab=31.50 E-value=1.4e+02 Score=23.25 Aligned_cols=49 Identities=8% Similarity=0.057 Sum_probs=35.7
Q ss_pred HHHHHHHhhcCCcEEEE-cCCC--CCCccCHHHHHHHHHHcCCEEEEEcccc
Q 022564 185 DQLEKSATLFRPKLIVA-GASA--YARLYDYERIRKVCNKQKAIMLADMAHI 233 (295)
Q Consensus 185 e~l~~~i~~~~tk~i~l-~~~n--~~~~~~l~~I~~ia~~~~~~vivD~a~~ 233 (295)
.+|-+.+.+.+..+|++ -.|- -|...|++.|.++|.-|++++-..-+-+
T Consensus 63 qQIga~Ia~g~id~vIFf~DPl~~~phepDi~aLlRlc~v~nIP~AtN~aTA 114 (143)
T TIGR00160 63 QQIGALIAEGKIDAVIFFWDPLNAQPHEPDVKALLRLCTVWNIPLATNVATA 114 (143)
T ss_pred HHHHHHHHhCCCCEEEEecCCCCCCCCCcCHHHHHHHHHhhCcccccCHHHH
Confidence 45666666547777665 3332 2577899999999999999998887744
No 493
>KOG1138 consensus Predicted cleavage and polyadenylation specificity factor (CPSF subunit) [RNA processing and modification]
Probab=31.46 E-value=2.3e+02 Score=27.10 Aligned_cols=74 Identities=14% Similarity=0.219 Sum_probs=46.0
Q ss_pred eEEeCCChH---HHH-HHHHhh-cCCCCeEEEecCCCCc--ccCccccccccccccceeeeEEEeeecCCCCCCCCHHHH
Q 022564 115 NVQSLSGSP---SNF-QVYTAL-LKPHDRIMALDLPHGG--HLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQL 187 (295)
Q Consensus 115 ~v~~~sG~~---a~~-~~~~al-~~~gd~Vl~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l 187 (295)
.|+|+.-.+ +.. +.+..+ .+|...|+..+++++. .+.|...+ ..+.+.++.| .++++.++
T Consensus 392 cvvf~~H~SlRfgdv~h~~e~~g~sp~NsvI~tdpD~~~~~vl~PfrpL----------amK~i~cpid---trlnfqql 458 (653)
T KOG1138|consen 392 CVVFMGHPSLRFGDVVHFLECWGLSPKNSVIFTDPDFSYLLVLAPFRPL----------AMKIIYCPID---TRLNFQQL 458 (653)
T ss_pred eeEecCCcchhhhHHHHHHHHhcCCCCCceEEeCCCCchhhhhcCCccc----------cceeEecccc---ccccHHHH
Confidence 566665554 222 133333 4677889999876654 33333322 1333544554 68999999
Q ss_pred HHHHhhcCCcEEEE
Q 022564 188 EKSATLFRPKLIVA 201 (295)
Q Consensus 188 ~~~i~~~~tk~i~l 201 (295)
.+++.+.+++.+++
T Consensus 459 ~kLlkelqPk~vlc 472 (653)
T KOG1138|consen 459 PKLLKELQPKIVLC 472 (653)
T ss_pred HHHHHHhCCCEEEC
Confidence 99999888987765
No 494
>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=31.22 E-value=1.3e+02 Score=28.15 Aligned_cols=48 Identities=10% Similarity=0.177 Sum_probs=33.9
Q ss_pred CCCHHHHHHHHhhcCCcEEEEc----------CCCCCCcc----CHHHHHHHHHHcCCEEEE
Q 022564 181 YIDYDQLEKSATLFRPKLIVAG----------ASAYARLY----DYERIRKVCNKQKAIMLA 228 (295)
Q Consensus 181 ~id~e~l~~~i~~~~tk~i~l~----------~~n~~~~~----~l~~I~~ia~~~~~~viv 228 (295)
..++|++.+.+++.+++++++. .+.+|++. -..+|.++||+.|+.++.
T Consensus 154 Et~~e~I~~~l~~~~p~lvVIDSIQT~~s~~~~SapGsVsQVRe~t~~L~~~AK~~~i~~fi 215 (456)
T COG1066 154 ETNLEDIIAELEQEKPDLVVIDSIQTLYSEEITSAPGSVSQVREVAAELMRLAKTKNIAIFI 215 (456)
T ss_pred hcCHHHHHHHHHhcCCCEEEEeccceeecccccCCCCcHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 4589999999988899999983 11123222 244788999999987554
No 495
>PF02445 NadA: Quinolinate synthetase A protein; InterPro: IPR003473 Quinolinate synthetase catalyzes the second step of the de novo biosynthetic pathway of pyridine nucleotide formation. In particular, quinolinate synthetase is involved in the condensation of dihydroxyacetone phosphate and iminoaspartate to form quinolinic acid []. This synthesis requires two enzymes, an FAD-containing "B protein" and an "A protein".; GO: 0008987 quinolinate synthetase A activity, 0009435 NAD biosynthetic process; PDB: 2QS0_A 1WZU_A.
Probab=31.07 E-value=1.3e+02 Score=26.59 Aligned_cols=26 Identities=15% Similarity=0.448 Sum_probs=15.7
Q ss_pred eEEeCCChH--HHHHHHHhhcCCCCeEEEec
Q 022564 115 NVQSLSGSP--SNFQVYTALLKPHDRIMALD 143 (295)
Q Consensus 115 ~v~~~sG~~--a~~~~~~al~~~gd~Vl~~~ 143 (295)
.+++..|.. |-. ..+++|+.+|++|+
T Consensus 48 ~~IVfcGV~FMAEt---AkIL~P~K~VllPd 75 (296)
T PF02445_consen 48 DIIVFCGVHFMAET---AKILNPDKKVLLPD 75 (296)
T ss_dssp SEEEEES-HHHHHH---HHHH-TTSEEE-SS
T ss_pred CEEEEecceehHhh---HHhhCCCCEEEecC
Confidence 445557877 444 35567999999988
No 496
>TIGR00196 yjeF_cterm yjeF C-terminal region, hydroxyethylthiazole kinase-related. The present model may hit hydroxyethylthiazole kinase, an enzyme associated with thiamine biosynthesis.
Probab=30.95 E-value=94 Score=26.82 Aligned_cols=45 Identities=13% Similarity=0.154 Sum_probs=31.3
Q ss_pred HHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEcc
Q 022564 184 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 184 ~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
.+++++.+. +..+++++.+ .+...++.++.+.+++++..+++|..
T Consensus 83 ~~~~~~~~~--~~davvig~G-l~~~~~~~~l~~~~~~~~~pvVlDa~ 127 (272)
T TIGR00196 83 VDEDEELLE--RYDVVVIGPG-LGQDPSFKKAVEEVLELDKPVVLDAD 127 (272)
T ss_pred HHHHHhhhc--cCCEEEEcCC-CCCCHHHHHHHHHHHhcCCCEEEEhH
Confidence 455555553 5678888644 23223388899999999999999975
No 497
>PLN00196 alpha-amylase; Provisional
Probab=30.67 E-value=44 Score=31.27 Aligned_cols=27 Identities=11% Similarity=0.234 Sum_probs=23.4
Q ss_pred CCCCccCHHHHHHHHHHcCCEEEEEcc
Q 022564 205 AYARLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 205 n~~~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
.+|+..+++++++-||++|+-||.|.+
T Consensus 87 ~fGt~~elk~Lv~~aH~~GIkVilDvV 113 (428)
T PLN00196 87 KYGNEAQLKSLIEAFHGKGVQVIADIV 113 (428)
T ss_pred cCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 345667899999999999999999987
No 498
>TIGR00629 uvde UV damage endonuclease UvdE. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=30.62 E-value=61 Score=28.93 Aligned_cols=33 Identities=15% Similarity=0.209 Sum_probs=26.2
Q ss_pred cCCCCCCccCHHHHHHHHHHcCCEEEEEccccc
Q 022564 202 GASAYARLYDYERIRKVCNKQKAIMLADMAHIS 234 (295)
Q Consensus 202 ~~~n~~~~~~l~~I~~ia~~~~~~vivD~a~~~ 234 (295)
+.-|.+....++++..+|++-+++++.|-.|..
T Consensus 191 ~lEnd~k~~sl~evL~lc~e~~iP~v~D~hHh~ 223 (312)
T TIGR00629 191 VLENDDVTWTVEDLLPVCEELNIPFVLDFHHHN 223 (312)
T ss_pred EeccCCCcCCHHHHHHHHHhcCCCEEEEhHHhh
Confidence 334445557899999999999999999977654
No 499
>TIGR01769 GGGP geranylgeranylglyceryl phosphate synthase. This model represents geranylgeranylglyceryl phosphate synthase which catalyzes the first committed step in the synthesis of ether-linked membrane lipids in archaea. The active enzyme is reported to be a homopentamer in Methanobacterium thermoautotrophicum but is reported to be a homodimer in Thermoplasma acidophilum.
Probab=30.48 E-value=1.1e+02 Score=25.47 Aligned_cols=40 Identities=18% Similarity=0.081 Sum_probs=28.2
Q ss_pred HHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHH-cCCEEEE
Q 022564 189 KSATLFRPKLIVAGASAYARLYDYERIRKVCNK-QKAIMLA 228 (295)
Q Consensus 189 ~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~-~~~~viv 228 (295)
+.+.+..|.+++++.|..-...++.++.+.+|+ .+++++.
T Consensus 18 ~~v~~~gtDaI~VGGS~gvt~~~~~~~v~~ik~~~~lPvil 58 (205)
T TIGR01769 18 KNAKDAGTDAIMVGGSLGIVESNLDQTVKKIKKITNLPVIL 58 (205)
T ss_pred HHHHhcCCCEEEEcCcCCCCHHHHHHHHHHHHhhcCCCEEE
Confidence 344444689999985543356678888888888 5788776
No 500
>PRK06806 fructose-bisphosphate aldolase; Provisional
Probab=30.29 E-value=1.4e+02 Score=26.11 Aligned_cols=51 Identities=8% Similarity=0.240 Sum_probs=39.7
Q ss_pred CCHHHHHHHHhhcCCcEEEEcCCCCC---CccCHHHHHHHHHHcCCEEEEEcccc
Q 022564 182 IDYDQLEKSATLFRPKLIVAGASAYA---RLYDYERIRKVCNKQKAIMLADMAHI 233 (295)
Q Consensus 182 id~e~l~~~i~~~~tk~i~l~~~n~~---~~~~l~~I~~ia~~~~~~vivD~a~~ 233 (295)
-|++.++++++. ....|.+..++.+ ...-.+++.++|+++|+.+=.|..|-
T Consensus 85 ~~~e~i~~Al~~-G~tsVm~d~s~~~~~eni~~t~~v~~~a~~~gv~veaE~ghl 138 (281)
T PRK06806 85 MTFEKIKEALEI-GFTSVMFDGSHLPLEENIQKTKEIVELAKQYGATVEAEIGRV 138 (281)
T ss_pred CCHHHHHHHHHc-CCCEEEEcCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeeeE
Confidence 489999999987 7888888766665 33345589999999999987776654
Done!